SHALO_0671 c9c7468d7aca1e89baa61c7938425412 368 Gene3D G3DSA:2.70.210.12 1 157 6.8E-54 T 18-10-2018 IPR036726 GTP1/OBG domain superfamily SHALO_0671 c9c7468d7aca1e89baa61c7938425412 368 Hamap MF_01454 GTPase Obg [obg]. 1 359 44.219 T 18-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 SHALO_0671 c9c7468d7aca1e89baa61c7938425412 368 Gene3D G3DSA:3.40.50.300 158 359 3.8E-41 T 18-10-2018 SHALO_0671 c9c7468d7aca1e89baa61c7938425412 368 Pfam PF01926 50S ribosome-binding GTPase 160 279 5.4E-23 T 18-10-2018 IPR006073 GTP binding domain GO:0005525 SHALO_0671 c9c7468d7aca1e89baa61c7938425412 368 SUPERFAMILY SSF52540 150 307 3.88E-39 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0671 c9c7468d7aca1e89baa61c7938425412 368 PIRSF PIRSF002401 1 332 6.2E-124 T 18-10-2018 IPR035101 GTP-binding protein, Obg-type SHALO_0671 c9c7468d7aca1e89baa61c7938425412 368 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 2 319 1.5E-124 T 18-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 SHALO_0671 c9c7468d7aca1e89baa61c7938425412 368 SUPERFAMILY SSF82051 1 157 4.05E-52 T 18-10-2018 IPR036726 GTP1/OBG domain superfamily SHALO_0671 c9c7468d7aca1e89baa61c7938425412 368 Pfam PF01018 GTP1/OBG 3 157 1.7E-55 T 18-10-2018 IPR006169 GTP1/OBG domain SHALO_0671 c9c7468d7aca1e89baa61c7938425412 368 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 210 225 2.0E-33 T 18-10-2018 IPR006073 GTP binding domain GO:0005525 SHALO_0671 c9c7468d7aca1e89baa61c7938425412 368 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 161 181 2.0E-33 T 18-10-2018 IPR006073 GTP binding domain GO:0005525 SHALO_0671 c9c7468d7aca1e89baa61c7938425412 368 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 227 245 2.0E-33 T 18-10-2018 IPR006073 GTP binding domain GO:0005525 SHALO_0671 c9c7468d7aca1e89baa61c7938425412 368 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 182 200 2.0E-33 T 18-10-2018 IPR006073 GTP binding domain GO:0005525 SHALO_2530 7cf149a8f2f94e8bc1149b211eb6460a 324 Gene3D G3DSA:1.20.1510.10 44 236 9.0E-40 T 18-10-2018 IPR027469 Cation efflux transmembrane domain superfamily SHALO_2530 7cf149a8f2f94e8bc1149b211eb6460a 324 Pfam PF01545 Cation efflux family 45 236 1.0E-43 T 18-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SHALO_2530 7cf149a8f2f94e8bc1149b211eb6460a 324 SUPERFAMILY SSF160240 243 315 1.83E-6 T 18-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 SHALO_2530 7cf149a8f2f94e8bc1149b211eb6460a 324 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 45 317 2.5E-80 T 18-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SHALO_2530 7cf149a8f2f94e8bc1149b211eb6460a 324 SUPERFAMILY SSF161111 43 237 1.57E-51 T 18-10-2018 IPR027469 Cation efflux transmembrane domain superfamily SHALO_0258 804d93181e7b4605e70c77469d0e4b4d 366 Gene3D G3DSA:3.40.640.10 45 272 8.7E-96 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 SHALO_0258 804d93181e7b4605e70c77469d0e4b4d 366 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 7 363 3.7E-105 T 18-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 SHALO_0258 804d93181e7b4605e70c77469d0e4b4d 366 SUPERFAMILY SSF53383 13 362 1.17E-67 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase SHALO_0258 804d93181e7b4605e70c77469d0e4b4d 366 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 224 233 - T 18-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 SHALO_0258 804d93181e7b4605e70c77469d0e4b4d 366 Gene3D G3DSA:3.90.1150.10 10 357 8.7E-96 T 18-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 SHALO_0258 804d93181e7b4605e70c77469d0e4b4d 366 Pfam PF00155 Aminotransferase class I and II 31 358 4.0E-46 T 18-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SHALO_0258 804d93181e7b4605e70c77469d0e4b4d 366 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 2 365 56.066 T 18-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 SHALO_0124 326500235ddefbe4035a489100a2c22c 605 Gene3D G3DSA:3.30.54.20 102 155 1.3E-53 T 18-10-2018 SHALO_0124 326500235ddefbe4035a489100a2c22c 605 Pfam PF03129 Anticodon binding domain 509 597 1.7E-20 T 18-10-2018 IPR004154 Anticodon-binding SHALO_0124 326500235ddefbe4035a489100a2c22c 605 Gene3D G3DSA:3.30.930.10 191 499 1.2E-124 T 18-10-2018 SHALO_0124 326500235ddefbe4035a489100a2c22c 605 SUPERFAMILY SSF52954 495 603 8.76E-28 T 18-10-2018 SHALO_0124 326500235ddefbe4035a489100a2c22c 605 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 44 598 4.0E-217 T 18-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SHALO_0124 326500235ddefbe4035a489100a2c22c 605 Gene3D G3DSA:3.40.50.800 500 604 2.7E-29 T 18-10-2018 IPR036621 Anticodon-binding domain superfamily SHALO_0124 326500235ddefbe4035a489100a2c22c 605 Gene3D G3DSA:3.30.980.10 41 190 1.3E-53 T 18-10-2018 SHALO_0124 326500235ddefbe4035a489100a2c22c 605 SUPERFAMILY SSF55681 211 494 3.06E-92 T 18-10-2018 SHALO_0124 326500235ddefbe4035a489100a2c22c 605 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 138 187 4.5E-14 T 18-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 SHALO_0124 326500235ddefbe4035a489100a2c22c 605 SUPERFAMILY SSF55186 35 209 7.59E-55 T 18-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 SHALO_0124 326500235ddefbe4035a489100a2c22c 605 SMART SM00863 138 187 7.6E-23 T 18-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 SHALO_0124 326500235ddefbe4035a489100a2c22c 605 PRINTS PR01047 Threonyl-tRNA synthetase signature 298 326 2.6E-51 T 18-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SHALO_0124 326500235ddefbe4035a489100a2c22c 605 PRINTS PR01047 Threonyl-tRNA synthetase signature 502 514 2.6E-51 T 18-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SHALO_0124 326500235ddefbe4035a489100a2c22c 605 PRINTS PR01047 Threonyl-tRNA synthetase signature 331 354 2.6E-51 T 18-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SHALO_0124 326500235ddefbe4035a489100a2c22c 605 PRINTS PR01047 Threonyl-tRNA synthetase signature 475 488 2.6E-51 T 18-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SHALO_0124 326500235ddefbe4035a489100a2c22c 605 PRINTS PR01047 Threonyl-tRNA synthetase signature 432 460 2.6E-51 T 18-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SHALO_0124 326500235ddefbe4035a489100a2c22c 605 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 38 598 33.013 T 18-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SHALO_0124 326500235ddefbe4035a489100a2c22c 605 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 288 496 2.2E-42 T 18-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_2929 08954b406ceca877c4de67711833c39b 690 Gene3D G3DSA:3.30.65.10 555 612 3.8E-11 T 18-10-2018 SHALO_2929 08954b406ceca877c4de67711833c39b 690 Gene3D G3DSA:3.30.65.10 613 655 3.5E-5 T 18-10-2018 SHALO_2929 08954b406ceca877c4de67711833c39b 690 Gene3D G3DSA:2.70.20.10 184 451 5.7E-153 T 18-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 SHALO_2929 08954b406ceca877c4de67711833c39b 690 Pfam PF01131 DNA topoisomerase 130 541 1.2E-123 T 18-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 SHALO_2929 08954b406ceca877c4de67711833c39b 690 SUPERFAMILY SSF56712 2 581 7.72E-180 T 18-10-2018 IPR023405 DNA topoisomerase, type IA, core domain SHALO_2929 08954b406ceca877c4de67711833c39b 690 Gene3D G3DSA:1.10.290.10 250 385 5.7E-153 T 18-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 SHALO_2929 08954b406ceca877c4de67711833c39b 690 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 4 604 7.6E-241 T 18-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 SHALO_2929 08954b406ceca877c4de67711833c39b 690 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 569 606 4.3E-15 T 18-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 SHALO_2929 08954b406ceca877c4de67711833c39b 690 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 621 656 2.1E-13 T 18-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 SHALO_2929 08954b406ceca877c4de67711833c39b 690 Gene3D G3DSA:3.40.50.140 1 134 1.8E-49 T 18-10-2018 SHALO_2929 08954b406ceca877c4de67711833c39b 690 SUPERFAMILY SSF57783 617 652 2.04E-8 T 18-10-2018 SHALO_2929 08954b406ceca877c4de67711833c39b 690 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 279 301 - T 18-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 SHALO_2929 08954b406ceca877c4de67711833c39b 690 Pfam PF01751 Toprim domain 4 113 6.1E-29 T 18-10-2018 IPR006171 TOPRIM domain SHALO_2929 08954b406ceca877c4de67711833c39b 690 Hamap MF_00952 DNA topoisomerase 1 [topA]. 2 643 52.604 T 18-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 SHALO_2929 08954b406ceca877c4de67711833c39b 690 SMART SM00437 242 504 1.6E-112 T 18-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 SHALO_2929 08954b406ceca877c4de67711833c39b 690 SMART SM00493 2 103 4.6E-30 T 18-10-2018 IPR006171 TOPRIM domain SHALO_2929 08954b406ceca877c4de67711833c39b 690 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 77 90 1.2E-33 T 18-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 SHALO_2929 08954b406ceca877c4de67711833c39b 690 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 162 180 1.2E-33 T 18-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 SHALO_2929 08954b406ceca877c4de67711833c39b 690 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 292 301 1.2E-33 T 18-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 SHALO_2929 08954b406ceca877c4de67711833c39b 690 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 467 481 1.2E-33 T 18-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 SHALO_2929 08954b406ceca877c4de67711833c39b 690 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 370 386 1.2E-33 T 18-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 SHALO_2929 08954b406ceca877c4de67711833c39b 690 Gene3D G3DSA:1.10.460.10 135 544 5.7E-153 T 18-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 SHALO_2929 08954b406ceca877c4de67711833c39b 690 SMART SM00436 104 192 4.6E-43 T 18-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 SHALO_2929 08954b406ceca877c4de67711833c39b 690 SUPERFAMILY SSF57783 563 609 1.87E-11 T 18-10-2018 SHALO_0253 57f90347b1a12b649b8825f2814b4973 178 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 2 176 2.1E-46 T 18-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 SHALO_0253 57f90347b1a12b649b8825f2814b4973 178 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 2 87 2.0E-30 T 18-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 SHALO_0253 57f90347b1a12b649b8825f2814b4973 178 SUPERFAMILY SSF50715 6 176 2.49E-44 T 18-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 SHALO_0253 57f90347b1a12b649b8825f2814b4973 178 Gene3D G3DSA:2.170.120.20 96 165 5.9E-17 T 18-10-2018 IPR037121 Ribosomal protein L25, C-terminal SHALO_0253 57f90347b1a12b649b8825f2814b4973 178 Pfam PF01386 Ribosomal L25p family 2 87 7.7E-20 T 18-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 SHALO_0253 57f90347b1a12b649b8825f2814b4973 178 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 4 178 21.179 T 18-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 SHALO_0253 57f90347b1a12b649b8825f2814b4973 178 Gene3D G3DSA:2.40.240.10 2 89 7.3E-20 T 18-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 SHALO_0253 57f90347b1a12b649b8825f2814b4973 178 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 100 176 8.3E-18 T 18-10-2018 IPR020057 Ribosomal protein L25, beta domain SHALO_2781 bc6d98e25342fb75f03437cd81b17e34 511 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 17 509 3.9E-136 T 18-10-2018 IPR004482 Mg chelatase-related protein SHALO_2781 bc6d98e25342fb75f03437cd81b17e34 511 Pfam PF13541 Subunit ChlI of Mg-chelatase 28 146 1.8E-34 T 18-10-2018 SHALO_2781 bc6d98e25342fb75f03437cd81b17e34 511 SUPERFAMILY SSF54211 17 173 1.18E-21 T 18-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold SHALO_2781 bc6d98e25342fb75f03437cd81b17e34 511 Pfam PF01078 Magnesium chelatase, subunit ChlI 210 413 1.8E-78 T 18-10-2018 IPR000523 Magnesium chelatase ChlI domain SHALO_2781 bc6d98e25342fb75f03437cd81b17e34 511 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 418 509 3.7E-23 T 18-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain SHALO_2781 bc6d98e25342fb75f03437cd81b17e34 511 Gene3D G3DSA:3.40.50.300 191 511 9.4E-47 T 18-10-2018 SHALO_2781 bc6d98e25342fb75f03437cd81b17e34 511 Gene3D G3DSA:3.30.230.10 22 175 5.3E-7 T 18-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SHALO_2781 bc6d98e25342fb75f03437cd81b17e34 511 SUPERFAMILY SSF52540 208 509 1.8E-34 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_1614 68cce11a93370928e7c5dbbd362f06ed 614 PIRSF PIRSF001336 1 607 7.1E-211 T 18-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SHALO_1614 68cce11a93370928e7c5dbbd362f06ed 614 TIGRFAM TIGR01273 speA: arginine decarboxylase 2 605 2.0E-212 T 18-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SHALO_1614 68cce11a93370928e7c5dbbd362f06ed 614 Gene3D G3DSA:3.20.20.10 51 328 1.4E-193 T 18-10-2018 IPR029066 PLP-binding barrel SHALO_1614 68cce11a93370928e7c5dbbd362f06ed 614 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 316 335 7.8E-17 T 18-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 SHALO_1614 68cce11a93370928e7c5dbbd362f06ed 614 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 106 118 7.8E-17 T 18-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 SHALO_1614 68cce11a93370928e7c5dbbd362f06ed 614 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 82 100 7.8E-17 T 18-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 SHALO_1614 68cce11a93370928e7c5dbbd362f06ed 614 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 515 528 7.8E-17 T 18-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 SHALO_1614 68cce11a93370928e7c5dbbd362f06ed 614 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 223 236 7.8E-17 T 18-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 SHALO_1614 68cce11a93370928e7c5dbbd362f06ed 614 SUPERFAMILY SSF50621 424 545 1.73E-13 T 18-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 SHALO_1614 68cce11a93370928e7c5dbbd362f06ed 614 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 60 326 7.3E-37 T 18-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 SHALO_1614 68cce11a93370928e7c5dbbd362f06ed 614 Gene3D G3DSA:2.40.37.10 3 542 1.4E-193 T 18-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 SHALO_1614 68cce11a93370928e7c5dbbd362f06ed 614 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 82 100 - T 18-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site SHALO_1614 68cce11a93370928e7c5dbbd362f06ed 614 SUPERFAMILY SSF51419 50 328 2.24E-56 T 18-10-2018 IPR029066 PLP-binding barrel SHALO_1614 68cce11a93370928e7c5dbbd362f06ed 614 PRINTS PR01180 Arginine decarboxylase signature 306 323 1.5E-41 T 18-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SHALO_1614 68cce11a93370928e7c5dbbd362f06ed 614 PRINTS PR01180 Arginine decarboxylase signature 129 144 1.5E-41 T 18-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SHALO_1614 68cce11a93370928e7c5dbbd362f06ed 614 PRINTS PR01180 Arginine decarboxylase signature 50 65 1.5E-41 T 18-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SHALO_1614 68cce11a93370928e7c5dbbd362f06ed 614 PRINTS PR01180 Arginine decarboxylase signature 74 88 1.5E-41 T 18-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SHALO_1614 68cce11a93370928e7c5dbbd362f06ed 614 PRINTS PR01180 Arginine decarboxylase signature 515 536 1.5E-41 T 18-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SHALO_1614 68cce11a93370928e7c5dbbd362f06ed 614 PRINTS PR01180 Arginine decarboxylase signature 466 491 1.5E-41 T 18-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SHALO_1614 68cce11a93370928e7c5dbbd362f06ed 614 PRINTS PR01180 Arginine decarboxylase signature 180 202 1.5E-41 T 18-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SHALO_1614 68cce11a93370928e7c5dbbd362f06ed 614 PRINTS PR01180 Arginine decarboxylase signature 441 462 1.5E-41 T 18-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SHALO_1614 68cce11a93370928e7c5dbbd362f06ed 614 Gene3D G3DSA:1.20.58.930 343 434 1.4E-193 T 18-10-2018 SHALO_1785 b6986a9438732ef7911c6bdd4c042a9e 719 SUPERFAMILY SSF81653 219 316 3.27E-27 T 18-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 SHALO_1785 b6986a9438732ef7911c6bdd4c042a9e 719 SUPERFAMILY SSF55008 4 69 3.27E-16 T 18-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 SHALO_1785 b6986a9438732ef7911c6bdd4c042a9e 719 Pfam PF00403 Heavy-metal-associated domain 8 66 1.6E-11 T 18-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SHALO_1785 b6986a9438732ef7911c6bdd4c042a9e 719 Gene3D G3DSA:2.70.150.20 210 321 4.1E-39 T 18-10-2018 SHALO_1785 b6986a9438732ef7911c6bdd4c042a9e 719 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 190 690 1.7E-95 T 18-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 SHALO_1785 b6986a9438732ef7911c6bdd4c042a9e 719 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 136 714 7.0E-177 T 18-10-2018 SHALO_1785 b6986a9438732ef7911c6bdd4c042a9e 719 ProSitePatterns PS01047 Heavy-metal-associated domain. 10 38 - T 18-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 SHALO_1785 b6986a9438732ef7911c6bdd4c042a9e 719 Gene3D G3DSA:3.40.1110.10 427 543 9.3E-86 T 18-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 SHALO_1785 b6986a9438732ef7911c6bdd4c042a9e 719 Pfam PF00122 E1-E2 ATPase 217 395 5.5E-57 T 18-10-2018 SHALO_1785 b6986a9438732ef7911c6bdd4c042a9e 719 SUPERFAMILY SSF81665 166 690 1.05E-17 T 18-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 SHALO_1785 b6986a9438732ef7911c6bdd4c042a9e 719 Gene3D G3DSA:3.40.50.1000 397 663 9.3E-86 T 18-10-2018 IPR023214 HAD superfamily SHALO_1785 b6986a9438732ef7911c6bdd4c042a9e 719 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 154 713 9.3E-186 T 18-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 SHALO_1785 b6986a9438732ef7911c6bdd4c042a9e 719 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 418 424 - T 18-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 SHALO_1785 b6986a9438732ef7911c6bdd4c042a9e 719 SUPERFAMILY SSF56784 415 711 3.75E-58 T 18-10-2018 IPR036412 HAD-like superfamily SHALO_1785 b6986a9438732ef7911c6bdd4c042a9e 719 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 416 430 3.8E-27 T 18-10-2018 SHALO_1785 b6986a9438732ef7911c6bdd4c042a9e 719 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 536 547 3.8E-27 T 18-10-2018 SHALO_1785 b6986a9438732ef7911c6bdd4c042a9e 719 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 634 646 3.8E-27 T 18-10-2018 SHALO_1785 b6986a9438732ef7911c6bdd4c042a9e 719 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 266 280 3.8E-27 T 18-10-2018 SHALO_1785 b6986a9438732ef7911c6bdd4c042a9e 719 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 558 568 3.8E-27 T 18-10-2018 SHALO_1785 b6986a9438732ef7911c6bdd4c042a9e 719 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 611 630 3.8E-27 T 18-10-2018 SHALO_1785 b6986a9438732ef7911c6bdd4c042a9e 719 Gene3D G3DSA:3.30.70.100 3 89 3.1E-16 T 18-10-2018 SHALO_1785 b6986a9438732ef7911c6bdd4c042a9e 719 PRINTS PR00943 Copper-transporting ATPase signature 139 158 4.5E-10 T 18-10-2018 SHALO_1785 b6986a9438732ef7911c6bdd4c042a9e 719 PRINTS PR00943 Copper-transporting ATPase signature 399 414 4.5E-10 T 18-10-2018 SHALO_1785 b6986a9438732ef7911c6bdd4c042a9e 719 PRINTS PR00943 Copper-transporting ATPase signature 48 68 4.5E-10 T 18-10-2018 SHALO_1785 b6986a9438732ef7911c6bdd4c042a9e 719 PRINTS PR00943 Copper-transporting ATPase signature 588 605 4.5E-10 T 18-10-2018 SHALO_1785 b6986a9438732ef7911c6bdd4c042a9e 719 PRINTS PR00943 Copper-transporting ATPase signature 20 34 4.5E-10 T 18-10-2018 SHALO_1785 b6986a9438732ef7911c6bdd4c042a9e 719 PRINTS PR00943 Copper-transporting ATPase signature 339 353 4.5E-10 T 18-10-2018 SHALO_1785 b6986a9438732ef7911c6bdd4c042a9e 719 Pfam PF00702 haloacid dehalogenase-like hydrolase 412 625 9.2E-44 T 18-10-2018 SHALO_1065 47ea279ead71fc9c7332cc4a68389b95 420 Pfam PF00464 Serine hydroxymethyltransferase 10 384 7.0E-165 T 18-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 SHALO_1065 47ea279ead71fc9c7332cc4a68389b95 420 Gene3D G3DSA:3.40.640.10 38 288 3.5E-176 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 SHALO_1065 47ea279ead71fc9c7332cc4a68389b95 420 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 222 238 - T 18-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 SHALO_1065 47ea279ead71fc9c7332cc4a68389b95 420 PIRSF PIRSF000412 1 418 2.6E-167 T 18-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 SHALO_1065 47ea279ead71fc9c7332cc4a68389b95 420 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 8 416 49.545 T 18-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 SHALO_1065 47ea279ead71fc9c7332cc4a68389b95 420 SUPERFAMILY SSF53383 4 416 5.25E-171 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase SHALO_1065 47ea279ead71fc9c7332cc4a68389b95 420 Gene3D G3DSA:3.90.1150.10 12 393 3.5E-176 T 18-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 SHALO_2431 d645529cc5f14a88819b99236d86a668 85 ProSitePatterns PS00464 Ribosomal protein L22 signature. 53 77 - T 18-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_2431 d645529cc5f14a88819b99236d86a668 85 SUPERFAMILY SSF54843 1 78 6.93E-22 T 18-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 SHALO_2431 d645529cc5f14a88819b99236d86a668 85 Gene3D G3DSA:3.90.470.10 1 85 5.4E-24 T 18-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 SHALO_2431 d645529cc5f14a88819b99236d86a668 85 Pfam PF00237 Ribosomal protein L22p/L17e 1 77 9.9E-18 T 18-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 SHALO_2431 d645529cc5f14a88819b99236d86a668 85 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 2 77 3.5E-25 T 18-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_0256 438107ed44fd478d05ad6b20d994c8d9 401 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 15 355 2.8E-25 T 18-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 SHALO_0256 438107ed44fd478d05ad6b20d994c8d9 401 Gene3D G3DSA:2.40.37.10 4 395 3.9E-145 T 18-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 SHALO_0256 438107ed44fd478d05ad6b20d994c8d9 401 PRINTS PR01181 Diaminopimelate decarboxylase signature 150 159 1.1E-27 T 18-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 SHALO_0256 438107ed44fd478d05ad6b20d994c8d9 401 PRINTS PR01181 Diaminopimelate decarboxylase signature 61 78 1.1E-27 T 18-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 SHALO_0256 438107ed44fd478d05ad6b20d994c8d9 401 PRINTS PR01181 Diaminopimelate decarboxylase signature 284 302 1.1E-27 T 18-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 SHALO_0256 438107ed44fd478d05ad6b20d994c8d9 401 PRINTS PR01181 Diaminopimelate decarboxylase signature 365 387 1.1E-27 T 18-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 SHALO_0256 438107ed44fd478d05ad6b20d994c8d9 401 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 43 61 - T 18-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site SHALO_0256 438107ed44fd478d05ad6b20d994c8d9 401 Gene3D G3DSA:3.20.20.10 20 261 3.9E-145 T 18-10-2018 IPR029066 PLP-binding barrel SHALO_0256 438107ed44fd478d05ad6b20d994c8d9 401 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 1 398 41.583 T 18-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 SHALO_0256 438107ed44fd478d05ad6b20d994c8d9 401 SUPERFAMILY SSF51419 12 268 1.21E-77 T 18-10-2018 IPR029066 PLP-binding barrel SHALO_0256 438107ed44fd478d05ad6b20d994c8d9 401 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 22 266 1.5E-63 T 18-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 SHALO_0256 438107ed44fd478d05ad6b20d994c8d9 401 SUPERFAMILY SSF50621 240 398 1.7E-54 T 18-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 SHALO_0256 438107ed44fd478d05ad6b20d994c8d9 401 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 256 275 3.7E-23 T 18-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 SHALO_0256 438107ed44fd478d05ad6b20d994c8d9 401 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 355 368 3.7E-23 T 18-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 SHALO_0256 438107ed44fd478d05ad6b20d994c8d9 401 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 63 75 3.7E-23 T 18-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 SHALO_0256 438107ed44fd478d05ad6b20d994c8d9 401 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 43 61 3.7E-23 T 18-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 SHALO_0256 438107ed44fd478d05ad6b20d994c8d9 401 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 176 189 3.7E-23 T 18-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 SHALO_0256 438107ed44fd478d05ad6b20d994c8d9 401 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 212 227 - T 18-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site SHALO_0256 438107ed44fd478d05ad6b20d994c8d9 401 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 3 397 2.2E-158 T 18-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 SHALO_0008 f033a16ae9b2ba1a0b976457431b4b01 224 Gene3D G3DSA:3.40.470.10 1 224 9.5E-99 T 18-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 SHALO_0008 f033a16ae9b2ba1a0b976457431b4b01 224 SUPERFAMILY SSF52141 5 223 8.29E-91 T 18-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 SHALO_0008 f033a16ae9b2ba1a0b976457431b4b01 224 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 7 222 40.094 T 18-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 SHALO_0008 f033a16ae9b2ba1a0b976457431b4b01 224 Pfam PF03167 Uracil DNA glycosylase superfamily 56 210 7.5E-20 T 18-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 SHALO_0008 f033a16ae9b2ba1a0b976457431b4b01 224 SMART SM00986 51 211 1.3E-35 T 18-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 SHALO_0008 f033a16ae9b2ba1a0b976457431b4b01 224 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 8 215 1.2E-81 T 18-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 SHALO_0008 f033a16ae9b2ba1a0b976457431b4b01 224 SMART SM00987 51 211 1.3E-35 T 18-10-2018 SHALO_1529 3bda9ca1d81e3ae56c0f61277e4ea7f4 575 SMART SM00382 358 544 7.3E-17 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_1529 3bda9ca1d81e3ae56c0f61277e4ea7f4 575 Pfam PF00664 ABC transporter transmembrane region 21 285 2.2E-47 T 18-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 SHALO_1529 3bda9ca1d81e3ae56c0f61277e4ea7f4 575 Pfam PF00005 ABC transporter 349 498 3.7E-35 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_1529 3bda9ca1d81e3ae56c0f61277e4ea7f4 575 Gene3D G3DSA:1.20.1560.10 1 317 1.7E-75 T 18-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 SHALO_1529 3bda9ca1d81e3ae56c0f61277e4ea7f4 575 SUPERFAMILY SSF90123 4 312 5.1E-68 T 18-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 SHALO_1529 3bda9ca1d81e3ae56c0f61277e4ea7f4 575 Gene3D G3DSA:3.40.50.300 318 572 9.1E-91 T 18-10-2018 SHALO_1529 3bda9ca1d81e3ae56c0f61277e4ea7f4 575 SUPERFAMILY SSF52540 324 569 1.22E-91 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_1760 beebdcf4563455f1db97e176521943d7 857 Gene3D G3DSA:3.40.50.300 150 342 3.3E-72 T 18-10-2018 SHALO_1760 beebdcf4563455f1db97e176521943d7 857 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 765 844 1.3E-22 T 18-10-2018 IPR019489 Clp ATPase, C-terminal SHALO_1760 beebdcf4563455f1db97e176521943d7 857 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 204 316 3.7E-15 T 18-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 SHALO_1760 beebdcf4563455f1db97e176521943d7 857 SUPERFAMILY SSF52540 160 548 1.66E-90 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_1760 beebdcf4563455f1db97e176521943d7 857 SMART SM00382 600 747 3.8E-11 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_1760 beebdcf4563455f1db97e176521943d7 857 SMART SM00382 199 344 3.5E-11 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_1760 beebdcf4563455f1db97e176521943d7 857 Gene3D G3DSA:1.10.1780.10 4 149 4.3E-26 T 18-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 SHALO_1760 beebdcf4563455f1db97e176521943d7 857 SMART SM01086 765 854 1.8E-31 T 18-10-2018 IPR019489 Clp ATPase, C-terminal SHALO_1760 beebdcf4563455f1db97e176521943d7 857 SUPERFAMILY SSF81923 6 156 1.22E-27 T 18-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 SHALO_1760 beebdcf4563455f1db97e176521943d7 857 Gene3D G3DSA:3.40.50.300 553 764 1.9E-86 T 18-10-2018 SHALO_1760 beebdcf4563455f1db97e176521943d7 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 711 725 3.8E-41 T 18-10-2018 IPR001270 ClpA/B family GO:0005524 SHALO_1760 beebdcf4563455f1db97e176521943d7 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 604 622 3.8E-41 T 18-10-2018 IPR001270 ClpA/B family GO:0005524 SHALO_1760 beebdcf4563455f1db97e176521943d7 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 649 667 3.8E-41 T 18-10-2018 IPR001270 ClpA/B family GO:0005524 SHALO_1760 beebdcf4563455f1db97e176521943d7 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 678 696 3.8E-41 T 18-10-2018 IPR001270 ClpA/B family GO:0005524 SHALO_1760 beebdcf4563455f1db97e176521943d7 857 Pfam PF07724 AAA domain (Cdc48 subfamily) 599 759 5.1E-55 T 18-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 SHALO_1760 beebdcf4563455f1db97e176521943d7 857 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 18-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 SHALO_1760 beebdcf4563455f1db97e176521943d7 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 97 146 0.0047 T 18-10-2018 IPR004176 Clp, N-terminal SHALO_1760 beebdcf4563455f1db97e176521943d7 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 21 69 0.0062 T 18-10-2018 IPR004176 Clp, N-terminal SHALO_1760 beebdcf4563455f1db97e176521943d7 857 Gene3D G3DSA:1.10.8.60 765 857 1.5E-24 T 18-10-2018 SHALO_1760 beebdcf4563455f1db97e176521943d7 857 Gene3D G3DSA:3.40.50.300 343 547 7.4E-62 T 18-10-2018 SHALO_1760 beebdcf4563455f1db97e176521943d7 857 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 634 652 - T 18-10-2018 IPR028299 ClpA/B, conserved site 2 SHALO_1760 beebdcf4563455f1db97e176521943d7 857 SUPERFAMILY SSF52540 549 852 6.92E-78 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_2283 d4eec03a5b920d5f926dd48608c73ddc 272 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 103 116 - T 18-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 SHALO_2283 d4eec03a5b920d5f926dd48608c73ddc 272 SUPERFAMILY SSF52540 66 231 5.34E-25 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_2283 d4eec03a5b920d5f926dd48608c73ddc 272 SMART SM00382 99 233 1.9E-8 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_2283 d4eec03a5b920d5f926dd48608c73ddc 272 Gene3D G3DSA:3.40.50.300 64 248 3.3E-51 T 18-10-2018 SHALO_2283 d4eec03a5b920d5f926dd48608c73ddc 272 PIRSF PIRSF003073 2 253 4.8E-81 T 18-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein SHALO_2283 d4eec03a5b920d5f926dd48608c73ddc 272 Pfam PF01695 IstB-like ATP binding protein 56 232 6.3E-60 T 18-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 SHALO_1610 1d1e805df5c1e93995a0dd8331d12214 464 ProSitePatterns PS00090 Nitrogenases component 1 alpha and beta subunits signature 2. 102 116 - T 18-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 SHALO_1610 1d1e805df5c1e93995a0dd8331d12214 464 Gene3D G3DSA:3.40.50.1980 166 437 4.3E-119 T 18-10-2018 SHALO_1610 1d1e805df5c1e93995a0dd8331d12214 464 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 38 45 - T 18-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 SHALO_1610 1d1e805df5c1e93995a0dd8331d12214 464 Gene3D G3DSA:1.20.89.10 271 452 4.3E-119 T 18-10-2018 SHALO_1610 1d1e805df5c1e93995a0dd8331d12214 464 Gene3D G3DSA:3.40.50.1980 20 165 4.3E-119 T 18-10-2018 SHALO_1610 1d1e805df5c1e93995a0dd8331d12214 464 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 20 447 1.3E-117 T 18-10-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 SHALO_1610 1d1e805df5c1e93995a0dd8331d12214 464 Gene3D G3DSA:3.40.50.1980 14 430 4.3E-119 T 18-10-2018 SHALO_1610 1d1e805df5c1e93995a0dd8331d12214 464 TIGRFAM TIGR02931 anfK_nitrog: Fe-only nitrogenase, beta subunit 2 464 3.9E-272 T 18-10-2018 IPR014280 Nitrogenase iron-iron, beta subunit GO:0009399|GO:0016163 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 SHALO_1610 1d1e805df5c1e93995a0dd8331d12214 464 SUPERFAMILY SSF53807 9 459 2.94E-131 T 18-10-2018 SHALO_0004 c6a690bdf94c1ba536d220a36de119ad 471 Gene3D G3DSA:3.30.70.270 66 219 7.9E-13 T 18-10-2018 SHALO_0004 c6a690bdf94c1ba536d220a36de119ad 471 Pfam PF00990 Diguanylate cyclase, GGDEF domain 78 207 3.1E-11 T 18-10-2018 IPR000160 GGDEF domain SHALO_0004 c6a690bdf94c1ba536d220a36de119ad 471 SMART SM00267 58 230 8.6E-4 T 18-10-2018 IPR000160 GGDEF domain SHALO_0004 c6a690bdf94c1ba536d220a36de119ad 471 SMART SM00052 223 465 2.3E-32 T 18-10-2018 IPR001633 EAL domain SHALO_0004 c6a690bdf94c1ba536d220a36de119ad 471 SUPERFAMILY SSF141868 231 466 2.22E-48 T 18-10-2018 IPR035919 EAL domain superfamily SHALO_0004 c6a690bdf94c1ba536d220a36de119ad 471 Gene3D G3DSA:3.20.20.450 226 469 4.2E-50 T 18-10-2018 IPR035919 EAL domain superfamily SHALO_0004 c6a690bdf94c1ba536d220a36de119ad 471 Pfam PF00563 EAL domain 231 460 7.6E-49 T 18-10-2018 IPR001633 EAL domain SHALO_0004 c6a690bdf94c1ba536d220a36de119ad 471 SUPERFAMILY SSF55073 85 199 1.33E-8 T 18-10-2018 IPR029787 Nucleotide cyclase SHALO_0899 63de76367087e1b5b31ed69e25ca7f3d 319 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 51 59 - T 18-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 SHALO_0899 63de76367087e1b5b31ed69e25ca7f3d 319 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 4 110 1.4E-23 T 18-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_0899 63de76367087e1b5b31ed69e25ca7f3d 319 SUPERFAMILY SSF46548 107 235 7.67E-22 T 18-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 SHALO_0899 63de76367087e1b5b31ed69e25ca7f3d 319 SUPERFAMILY SSF54292 2 105 3.34E-19 T 18-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 SHALO_0899 63de76367087e1b5b31ed69e25ca7f3d 319 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 6 227 4.5E-50 T 18-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_0899 63de76367087e1b5b31ed69e25ca7f3d 319 Gene3D G3DSA:1.10.1060.10 107 238 3.6E-27 T 18-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 SHALO_0899 63de76367087e1b5b31ed69e25ca7f3d 319 Pfam PF13183 4Fe-4S dicluster domain 147 218 5.8E-9 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_0899 63de76367087e1b5b31ed69e25ca7f3d 319 Gene3D G3DSA:3.10.20.30 1 105 5.6E-25 T 18-10-2018 IPR012675 Beta-grasp domain superfamily SHALO_0916 b0f361e1368439d5eecd8f26c34ad657 176 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 4 78 2.2E-11 T 18-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal SHALO_0916 b0f361e1368439d5eecd8f26c34ad657 176 SUPERFAMILY SSF48695 21 159 1.93E-14 T 18-10-2018 IPR036280 Multiheme cytochrome superfamily SHALO_0916 b0f361e1368439d5eecd8f26c34ad657 176 Gene3D G3DSA:1.10.1130.10 51 171 3.1E-10 T 18-10-2018 SHALO_1672 3233219db8e8c60f912b62b7b59669e5 666 SMART SM00897 42 267 8.7E-32 T 18-10-2018 IPR013702 FIST domain, N-terminal SHALO_1672 3233219db8e8c60f912b62b7b59669e5 666 Pfam PF10442 FIST C domain 286 398 2.8E-12 T 18-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 SHALO_1672 3233219db8e8c60f912b62b7b59669e5 666 SMART SM01204 274 401 5.9E-20 T 18-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 SHALO_1672 3233219db8e8c60f912b62b7b59669e5 666 SUPERFAMILY SSF58104 456 653 7.32E-46 T 18-10-2018 SHALO_1672 3233219db8e8c60f912b62b7b59669e5 666 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 505 638 5.2E-34 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_1672 3233219db8e8c60f912b62b7b59669e5 666 Gene3D G3DSA:1.10.287.950 442 661 2.7E-43 T 18-10-2018 SHALO_1672 3233219db8e8c60f912b62b7b59669e5 666 SMART SM00283 443 661 3.0E-25 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_1672 3233219db8e8c60f912b62b7b59669e5 666 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 533 560 5.1E-18 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 SHALO_1672 3233219db8e8c60f912b62b7b59669e5 666 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 562 591 5.1E-18 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 SHALO_1672 3233219db8e8c60f912b62b7b59669e5 666 Pfam PF08495 FIST N domain 45 253 3.7E-20 T 18-10-2018 IPR013702 FIST domain, N-terminal SHALO_0987 1291236ff57ef50056675f7811a4822b 205 PIRSF PIRSF006324 2 204 1.7E-48 T 18-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 SHALO_0987 1291236ff57ef50056675f7811a4822b 205 Pfam PF01810 LysE type translocator 12 201 2.5E-34 T 18-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 SHALO_2565 e814f62ccfb57bd1a78eb8d70b27229b 705 Pfam PF00990 Diguanylate cyclase, GGDEF domain 527 697 6.4E-43 T 18-10-2018 IPR000160 GGDEF domain SHALO_2565 e814f62ccfb57bd1a78eb8d70b27229b 705 Gene3D G3DSA:3.30.70.270 530 704 1.1E-54 T 18-10-2018 SHALO_2565 e814f62ccfb57bd1a78eb8d70b27229b 705 SUPERFAMILY SSF55785 406 518 6.68E-17 T 18-10-2018 IPR035965 PAS domain superfamily SHALO_2565 e814f62ccfb57bd1a78eb8d70b27229b 705 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 524 700 9.8E-44 T 18-10-2018 IPR000160 GGDEF domain SHALO_2565 e814f62ccfb57bd1a78eb8d70b27229b 705 Pfam PF08448 PAS fold 407 517 3.1E-13 T 18-10-2018 IPR013656 PAS fold-4 SHALO_2565 e814f62ccfb57bd1a78eb8d70b27229b 705 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 398 521 1.0E-8 T 18-10-2018 IPR000014 PAS domain SHALO_2565 e814f62ccfb57bd1a78eb8d70b27229b 705 SMART SM00091 401 467 1.4E-4 T 18-10-2018 IPR000014 PAS domain SHALO_2565 e814f62ccfb57bd1a78eb8d70b27229b 705 SMART SM00304 331 383 0.0022 T 18-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 SHALO_2565 e814f62ccfb57bd1a78eb8d70b27229b 705 SMART SM00267 516 701 1.2E-55 T 18-10-2018 IPR000160 GGDEF domain SHALO_2565 e814f62ccfb57bd1a78eb8d70b27229b 705 SUPERFAMILY SSF55073 532 702 8.63E-45 T 18-10-2018 IPR029787 Nucleotide cyclase SHALO_2565 e814f62ccfb57bd1a78eb8d70b27229b 705 Gene3D G3DSA:3.30.450.20 386 529 4.5E-23 T 18-10-2018 SHALO_1229 49b480684c68f1cc279d29846162c815 754 Pfam PF02743 Cache domain 38 236 6.0E-12 T 18-10-2018 IPR033479 Double Cache domain 1 SHALO_1229 49b480684c68f1cc279d29846162c815 754 Gene3D G3DSA:3.30.70.270 326 500 7.2E-50 T 18-10-2018 SHALO_1229 49b480684c68f1cc279d29846162c815 754 SMART SM00052 497 742 1.2E-99 T 18-10-2018 IPR001633 EAL domain SHALO_1229 49b480684c68f1cc279d29846162c815 754 Pfam PF00563 EAL domain 503 737 6.3E-67 T 18-10-2018 IPR001633 EAL domain SHALO_1229 49b480684c68f1cc279d29846162c815 754 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 329 483 9.1E-36 T 18-10-2018 IPR000160 GGDEF domain SHALO_1229 49b480684c68f1cc279d29846162c815 754 SUPERFAMILY SSF141868 502 750 1.96E-79 T 18-10-2018 IPR035919 EAL domain superfamily SHALO_1229 49b480684c68f1cc279d29846162c815 754 SUPERFAMILY SSF55073 336 483 2.2E-42 T 18-10-2018 IPR029787 Nucleotide cyclase SHALO_1229 49b480684c68f1cc279d29846162c815 754 SMART SM00267 321 487 1.2E-48 T 18-10-2018 IPR000160 GGDEF domain SHALO_1229 49b480684c68f1cc279d29846162c815 754 Gene3D G3DSA:3.30.450.20 27 173 1.2E-7 T 18-10-2018 SHALO_1229 49b480684c68f1cc279d29846162c815 754 Gene3D G3DSA:3.20.20.450 501 751 5.7E-83 T 18-10-2018 IPR035919 EAL domain superfamily SHALO_1229 49b480684c68f1cc279d29846162c815 754 Pfam PF00990 Diguanylate cyclase, GGDEF domain 331 481 3.5E-40 T 18-10-2018 IPR000160 GGDEF domain SHALO_0758 c512c4e5fa0d7c27f04300598e93fa0b 1067 Pfam PF00072 Response regulator receiver domain 772 886 1.4E-24 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_0758 c512c4e5fa0d7c27f04300598e93fa0b 1067 SUPERFAMILY SSF52172 770 888 5.98E-34 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_0758 c512c4e5fa0d7c27f04300598e93fa0b 1067 SMART SM00387 499 617 1.5E-31 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_0758 c512c4e5fa0d7c27f04300598e93fa0b 1067 Gene3D G3DSA:1.10.287.130 358 450 2.3E-28 T 18-10-2018 SHALO_0758 c512c4e5fa0d7c27f04300598e93fa0b 1067 Gene3D G3DSA:3.40.50.12330 764 826 1.1E-21 T 18-10-2018 SHALO_0758 c512c4e5fa0d7c27f04300598e93fa0b 1067 Gene3D G3DSA:3.30.565.10 453 618 1.9E-43 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_0758 c512c4e5fa0d7c27f04300598e93fa0b 1067 Pfam PF08376 Nitrate and nitrite sensing 55 283 9.0E-21 T 18-10-2018 IPR013587 Nitrate/nitrite sensing protein SHALO_0758 c512c4e5fa0d7c27f04300598e93fa0b 1067 SUPERFAMILY SSF47384 375 453 1.0E-21 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SHALO_0758 c512c4e5fa0d7c27f04300598e93fa0b 1067 SUPERFAMILY SSF55874 441 614 5.24E-40 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_0758 c512c4e5fa0d7c27f04300598e93fa0b 1067 SMART SM00388 387 452 1.4E-26 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_0758 c512c4e5fa0d7c27f04300598e93fa0b 1067 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 499 615 9.7E-25 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_0758 c512c4e5fa0d7c27f04300598e93fa0b 1067 SMART SM00448 770 886 3.2E-30 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_0758 c512c4e5fa0d7c27f04300598e93fa0b 1067 Gene3D G3DSA:3.40.50.2300 827 895 1.3E-18 T 18-10-2018 SHALO_0758 c512c4e5fa0d7c27f04300598e93fa0b 1067 PRINTS PR00344 Bacterial sensor protein C-terminal signature 560 570 2.0E-11 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_0758 c512c4e5fa0d7c27f04300598e93fa0b 1067 PRINTS PR00344 Bacterial sensor protein C-terminal signature 542 556 2.0E-11 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_0758 c512c4e5fa0d7c27f04300598e93fa0b 1067 PRINTS PR00344 Bacterial sensor protein C-terminal signature 601 614 2.0E-11 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_0758 c512c4e5fa0d7c27f04300598e93fa0b 1067 PRINTS PR00344 Bacterial sensor protein C-terminal signature 577 595 2.0E-11 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_0758 c512c4e5fa0d7c27f04300598e93fa0b 1067 Pfam PF00512 His Kinase A (phospho-acceptor) domain 388 451 1.9E-20 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_1002 b1e17cdcd683cca2f232a5ba75ba3f47 277 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 7 214 5.8E-55 T 18-10-2018 IPR003740 Uncharacterised membrane protein YitT SHALO_1002 b1e17cdcd683cca2f232a5ba75ba3f47 277 PIRSF PIRSF006483 1 277 8.3E-72 T 18-10-2018 IPR003740 Uncharacterised membrane protein YitT SHALO_1002 b1e17cdcd683cca2f232a5ba75ba3f47 277 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 223 274 6.3E-14 T 18-10-2018 IPR019264 Domain of unknown function DUF2179 SHALO_1002 b1e17cdcd683cca2f232a5ba75ba3f47 277 Gene3D G3DSA:3.30.70.120 192 267 7.7E-15 T 18-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal SHALO_0935 bb6e95bd6fcd564cf0016e4ea2a1ac43 319 Pfam PF12802 MarR family 36 91 9.6E-8 T 18-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SHALO_0935 bb6e95bd6fcd564cf0016e4ea2a1ac43 319 SMART SM00347 28 128 1.3E-7 T 18-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SHALO_0935 bb6e95bd6fcd564cf0016e4ea2a1ac43 319 Gene3D G3DSA:1.10.10.10 2 144 5.3E-21 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_0935 bb6e95bd6fcd564cf0016e4ea2a1ac43 319 SUPERFAMILY SSF46785 10 143 1.57E-20 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SHALO_0935 bb6e95bd6fcd564cf0016e4ea2a1ac43 319 SUPERFAMILY SSF55729 178 299 3.31E-24 T 18-10-2018 IPR016181 Acyl-CoA N-acyltransferase SHALO_0935 bb6e95bd6fcd564cf0016e4ea2a1ac43 319 Gene3D G3DSA:3.40.630.30 171 303 1.4E-25 T 18-10-2018 SHALO_0935 bb6e95bd6fcd564cf0016e4ea2a1ac43 319 Pfam PF00583 Acetyltransferase (GNAT) family 198 292 1.1E-15 T 18-10-2018 IPR000182 GNAT domain SHALO_2459 63f0288e6971774e82d00446433f661b 338 Gene3D G3DSA:3.30.70.270 168 338 2.2E-57 T 18-10-2018 SHALO_2459 63f0288e6971774e82d00446433f661b 338 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 171 333 3.3E-47 T 18-10-2018 IPR000160 GGDEF domain SHALO_2459 63f0288e6971774e82d00446433f661b 338 Gene3D G3DSA:3.30.450.20 3 129 1.0E-21 T 18-10-2018 SHALO_2459 63f0288e6971774e82d00446433f661b 338 Pfam PF00990 Diguanylate cyclase, GGDEF domain 173 330 2.9E-50 T 18-10-2018 IPR000160 GGDEF domain SHALO_2459 63f0288e6971774e82d00446433f661b 338 SUPERFAMILY SSF55073 178 335 2.04E-49 T 18-10-2018 IPR029787 Nucleotide cyclase SHALO_2459 63f0288e6971774e82d00446433f661b 338 Pfam PF00989 PAS fold 5 55 3.1E-5 T 18-10-2018 IPR013767 PAS fold GO:0006355 SHALO_2459 63f0288e6971774e82d00446433f661b 338 SUPERFAMILY SSF55785 6 77 2.79E-9 T 18-10-2018 IPR035965 PAS domain superfamily SHALO_2459 63f0288e6971774e82d00446433f661b 338 SMART SM00267 161 334 1.1E-59 T 18-10-2018 IPR000160 GGDEF domain SHALO_1125 4eeffc59002a75eb029d80ffe34856f9 340 PIRSF PIRSF000116 203 335 1.0E-12 T 18-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 SHALO_1125 4eeffc59002a75eb029d80ffe34856f9 340 PIRSF PIRSF000116 4 207 2.6E-41 T 18-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 SHALO_1125 4eeffc59002a75eb029d80ffe34856f9 340 Gene3D G3DSA:1.10.3730.40 184 340 4.7E-70 T 18-10-2018 SHALO_1125 4eeffc59002a75eb029d80ffe34856f9 340 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 16 179 4.2E-74 T 18-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 SHALO_1125 4eeffc59002a75eb029d80ffe34856f9 340 SUPERFAMILY SSF48179 185 334 1.87E-68 T 18-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 SHALO_1125 4eeffc59002a75eb029d80ffe34856f9 340 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 185 328 6.9E-64 T 18-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 SHALO_1125 4eeffc59002a75eb029d80ffe34856f9 340 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 3 330 43.948 T 18-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 SHALO_1125 4eeffc59002a75eb029d80ffe34856f9 340 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 17 328 1.2E-132 T 18-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 SHALO_1125 4eeffc59002a75eb029d80ffe34856f9 340 Gene3D G3DSA:3.40.50.720 1 183 3.7E-76 T 18-10-2018 SHALO_1125 4eeffc59002a75eb029d80ffe34856f9 340 SUPERFAMILY SSF51735 4 184 2.54E-71 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_2379 5c773c43276e2ae3983345da5fb3b5f8 907 Pfam PF00580 UvrD/REP helicase N-terminal domain 8 394 8.1E-44 T 18-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 SHALO_2379 5c773c43276e2ae3983345da5fb3b5f8 907 SUPERFAMILY SSF52540 5 705 1.82E-77 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_2379 5c773c43276e2ae3983345da5fb3b5f8 907 Gene3D G3DSA:3.40.50.300 403 510 4.9E-9 T 18-10-2018 SHALO_2379 5c773c43276e2ae3983345da5fb3b5f8 907 Gene3D G3DSA:3.40.50.300 551 717 1.1E-15 T 18-10-2018 SHALO_2379 5c773c43276e2ae3983345da5fb3b5f8 907 Pfam PF12705 PD-(D/E)XK nuclease superfamily 740 898 2.5E-5 T 18-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type SHALO_2379 5c773c43276e2ae3983345da5fb3b5f8 907 Gene3D G3DSA:3.40.50.300 192 397 1.3E-21 T 18-10-2018 SHALO_2379 5c773c43276e2ae3983345da5fb3b5f8 907 SUPERFAMILY SSF52980 749 896 1.82E-9 T 18-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 SHALO_2379 5c773c43276e2ae3983345da5fb3b5f8 907 Pfam PF13361 UvrD-like helicase C-terminal domain 402 520 1.5E-8 T 18-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 SHALO_2379 5c773c43276e2ae3983345da5fb3b5f8 907 Pfam PF13361 UvrD-like helicase C-terminal domain 593 701 2.3E-8 T 18-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 SHALO_2379 5c773c43276e2ae3983345da5fb3b5f8 907 Gene3D G3DSA:3.90.320.10 726 902 8.4E-7 T 18-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal SHALO_2196 82c6fe2e74fb166e10bd0014df69bb75 484 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 389 467 3.5E-26 T 18-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like SHALO_2196 82c6fe2e74fb166e10bd0014df69bb75 484 SUPERFAMILY SSF52540 190 469 3.23E-53 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_2196 82c6fe2e74fb166e10bd0014df69bb75 484 Gene3D G3DSA:3.40.50.300 209 386 2.1E-47 T 18-10-2018 SHALO_2196 82c6fe2e74fb166e10bd0014df69bb75 484 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 466 3.3E-144 T 18-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 SHALO_2196 82c6fe2e74fb166e10bd0014df69bb75 484 Hamap MF_00195 GTPase Der [der]. 1 471 32.19 T 18-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 SHALO_2196 82c6fe2e74fb166e10bd0014df69bb75 484 Gene3D G3DSA:3.40.50.300 1 158 4.7E-38 T 18-10-2018 SHALO_2196 82c6fe2e74fb166e10bd0014df69bb75 484 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 88 2.7E-6 T 18-10-2018 IPR006073 GTP binding domain GO:0005525 SHALO_2196 82c6fe2e74fb166e10bd0014df69bb75 484 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 4 24 2.7E-6 T 18-10-2018 IPR006073 GTP binding domain GO:0005525 SHALO_2196 82c6fe2e74fb166e10bd0014df69bb75 484 SUPERFAMILY SSF52540 3 166 2.4E-37 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_2196 82c6fe2e74fb166e10bd0014df69bb75 484 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 213 378 1.6E-26 T 18-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 SHALO_2196 82c6fe2e74fb166e10bd0014df69bb75 484 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 2 153 8.2E-26 T 18-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 SHALO_2196 82c6fe2e74fb166e10bd0014df69bb75 484 Gene3D G3DSA:3.30.300.20 388 470 1.3E-25 T 18-10-2018 IPR015946 K homology domain-like, alpha/beta SHALO_2196 82c6fe2e74fb166e10bd0014df69bb75 484 Pfam PF01926 50S ribosome-binding GTPase 216 333 3.1E-23 T 18-10-2018 IPR006073 GTP binding domain GO:0005525 SHALO_2196 82c6fe2e74fb166e10bd0014df69bb75 484 Pfam PF01926 50S ribosome-binding GTPase 3 117 9.5E-22 T 18-10-2018 IPR006073 GTP binding domain GO:0005525 SHALO_2196 82c6fe2e74fb166e10bd0014df69bb75 484 PIRSF PIRSF006485 1 476 2.1E-141 T 18-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 SHALO_0291 edfa18e2ccc9bd767bcac733885dda7d 294 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 83 94 - T 18-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 SHALO_0291 edfa18e2ccc9bd767bcac733885dda7d 294 SUPERFAMILY SSF55060 158 274 2.67E-29 T 18-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily SHALO_0291 edfa18e2ccc9bd767bcac733885dda7d 294 TIGRFAM TIGR00191 thrB: homoserine kinase 1 293 1.9E-82 T 18-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 SHALO_0291 edfa18e2ccc9bd767bcac733885dda7d 294 PIRSF PIRSF000676 1 294 1.7E-81 T 18-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 SHALO_0291 edfa18e2ccc9bd767bcac733885dda7d 294 Pfam PF00288 GHMP kinases N terminal domain 77 137 1.1E-9 T 18-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 SHALO_0291 edfa18e2ccc9bd767bcac733885dda7d 294 SUPERFAMILY SSF54211 2 141 4.17E-26 T 18-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold SHALO_0291 edfa18e2ccc9bd767bcac733885dda7d 294 Gene3D G3DSA:3.30.70.890 156 261 2.0E-75 T 18-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily SHALO_0291 edfa18e2ccc9bd767bcac733885dda7d 294 Hamap MF_00384 Homoserine kinase [thrB]. 3 292 26.977 T 18-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 SHALO_0291 edfa18e2ccc9bd767bcac733885dda7d 294 PRINTS PR00958 Homoserine kinase signature 163 180 8.0E-31 T 18-10-2018 SHALO_0291 edfa18e2ccc9bd767bcac733885dda7d 294 PRINTS PR00958 Homoserine kinase signature 124 137 8.0E-31 T 18-10-2018 SHALO_0291 edfa18e2ccc9bd767bcac733885dda7d 294 PRINTS PR00958 Homoserine kinase signature 242 257 8.0E-31 T 18-10-2018 SHALO_0291 edfa18e2ccc9bd767bcac733885dda7d 294 PRINTS PR00958 Homoserine kinase signature 8 23 8.0E-31 T 18-10-2018 SHALO_0291 edfa18e2ccc9bd767bcac733885dda7d 294 PRINTS PR00958 Homoserine kinase signature 90 105 8.0E-31 T 18-10-2018 SHALO_0291 edfa18e2ccc9bd767bcac733885dda7d 294 Gene3D G3DSA:3.30.230.10 3 155 2.0E-75 T 18-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SHALO_0471 db36f49c255dc87e23c3e9eae23e4ed7 399 Gene3D G3DSA:2.40.30.10 343 398 2.2E-27 T 18-10-2018 SHALO_0471 db36f49c255dc87e23c3e9eae23e4ed7 399 Pfam PF03143 Elongation factor Tu C-terminal domain 303 397 4.9E-33 T 18-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal SHALO_0471 db36f49c255dc87e23c3e9eae23e4ed7 399 Gene3D G3DSA:3.40.50.300 1 208 7.1E-69 T 18-10-2018 SHALO_0471 db36f49c255dc87e23c3e9eae23e4ed7 399 Pfam PF00009 Elongation factor Tu GTP binding domain 10 206 9.4E-59 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHALO_0471 db36f49c255dc87e23c3e9eae23e4ed7 399 SUPERFAMILY SSF50465 307 399 1.76E-36 T 18-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal SHALO_0471 db36f49c255dc87e23c3e9eae23e4ed7 399 SUPERFAMILY SSF50447 210 306 3.73E-30 T 18-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily SHALO_0471 db36f49c255dc87e23c3e9eae23e4ed7 399 PRINTS PR00315 GTP-binding elongation factor signature 58 66 2.3E-24 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHALO_0471 db36f49c255dc87e23c3e9eae23e4ed7 399 PRINTS PR00315 GTP-binding elongation factor signature 131 140 2.3E-24 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHALO_0471 db36f49c255dc87e23c3e9eae23e4ed7 399 PRINTS PR00315 GTP-binding elongation factor signature 14 27 2.3E-24 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHALO_0471 db36f49c255dc87e23c3e9eae23e4ed7 399 PRINTS PR00315 GTP-binding elongation factor signature 94 105 2.3E-24 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHALO_0471 db36f49c255dc87e23c3e9eae23e4ed7 399 PRINTS PR00315 GTP-binding elongation factor signature 78 88 2.3E-24 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHALO_0471 db36f49c255dc87e23c3e9eae23e4ed7 399 Pfam PF03144 Elongation factor Tu domain 2 230 299 1.2E-15 T 18-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 SHALO_0471 db36f49c255dc87e23c3e9eae23e4ed7 399 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 399 6.0E-228 T 18-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 SHALO_0471 db36f49c255dc87e23c3e9eae23e4ed7 399 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 399 59.553 T 18-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 SHALO_0471 db36f49c255dc87e23c3e9eae23e4ed7 399 SUPERFAMILY SSF52540 6 224 6.79E-61 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0471 db36f49c255dc87e23c3e9eae23e4ed7 399 Gene3D G3DSA:2.40.30.10 211 339 1.8E-52 T 18-10-2018 SHALO_0471 db36f49c255dc87e23c3e9eae23e4ed7 399 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 147 4.9E-14 T 18-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 SHALO_0471 db36f49c255dc87e23c3e9eae23e4ed7 399 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 18-10-2018 IPR031157 Tr-type G domain, conserved site SHALO_0325 eb7ccaea86f65a59ff329021596039dd 350 SMART SM00267 179 347 1.7E-48 T 18-10-2018 IPR000160 GGDEF domain SHALO_0325 eb7ccaea86f65a59ff329021596039dd 350 Gene3D G3DSA:3.30.70.270 178 349 5.6E-51 T 18-10-2018 SHALO_0325 eb7ccaea86f65a59ff329021596039dd 350 SUPERFAMILY SSF55073 195 348 1.41E-44 T 18-10-2018 IPR029787 Nucleotide cyclase SHALO_0325 eb7ccaea86f65a59ff329021596039dd 350 Pfam PF00990 Diguanylate cyclase, GGDEF domain 192 342 1.3E-39 T 18-10-2018 IPR000160 GGDEF domain SHALO_0325 eb7ccaea86f65a59ff329021596039dd 350 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 186 346 2.1E-43 T 18-10-2018 IPR000160 GGDEF domain SHALO_1372 0b14a78d73eac5ea368c0ba4329cba65 564 TIGRFAM TIGR00815 sulP: sulfate permease 16 551 2.6E-120 T 18-10-2018 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 SHALO_1372 0b14a78d73eac5ea368c0ba4329cba65 564 Pfam PF01740 STAS domain 453 550 5.4E-14 T 18-10-2018 IPR002645 STAS domain SHALO_1372 0b14a78d73eac5ea368c0ba4329cba65 564 Gene3D G3DSA:3.30.750.24 436 562 3.9E-30 T 18-10-2018 IPR036513 STAS domain superfamily SHALO_1372 0b14a78d73eac5ea368c0ba4329cba65 564 SUPERFAMILY SSF52091 453 557 5.1E-18 T 18-10-2018 IPR036513 STAS domain superfamily SHALO_1372 0b14a78d73eac5ea368c0ba4329cba65 564 Pfam PF00916 Sulfate permease family 23 387 3.5E-84 T 18-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 SHALO_2195 170bd34cfff2f944ce5a591c8379e2fc 356 Pfam PF00924 Mechanosensitive ion channel 142 341 2.5E-64 T 18-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 SHALO_2195 170bd34cfff2f944ce5a591c8379e2fc 356 SUPERFAMILY SSF82689 249 352 3.01E-19 T 18-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 SHALO_2195 170bd34cfff2f944ce5a591c8379e2fc 356 Gene3D G3DSA:2.30.30.60 198 247 2.9E-14 T 18-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily SHALO_2195 170bd34cfff2f944ce5a591c8379e2fc 356 Gene3D G3DSA:3.30.70.100 249 346 2.8E-19 T 18-10-2018 SHALO_2195 170bd34cfff2f944ce5a591c8379e2fc 356 SUPERFAMILY SSF50182 182 248 1.05E-17 T 18-10-2018 IPR010920 LSM domain superfamily SHALO_2195 170bd34cfff2f944ce5a591c8379e2fc 356 SUPERFAMILY SSF82861 96 181 3.79E-13 T 18-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 SHALO_2406 d2385afd72387c70a5d318581aea1c3b 437 SUPERFAMILY SSF53244 283 433 5.49E-46 T 18-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 SHALO_2406 d2385afd72387c70a5d318581aea1c3b 437 Pfam PF08245 Mur ligase middle domain 69 261 1.1E-41 T 18-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 SHALO_2406 d2385afd72387c70a5d318581aea1c3b 437 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 1 430 28.138 T 18-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 SHALO_2406 d2385afd72387c70a5d318581aea1c3b 437 SUPERFAMILY SSF53623 63 281 8.5E-56 T 18-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 SHALO_2406 d2385afd72387c70a5d318581aea1c3b 437 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 62 430 3.0E-129 T 18-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 SHALO_2406 d2385afd72387c70a5d318581aea1c3b 437 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 67 91 - T 18-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 SHALO_2406 d2385afd72387c70a5d318581aea1c3b 437 Pfam PF02875 Mur ligase family, glutamate ligase domain 283 363 5.4E-22 T 18-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 SHALO_2406 d2385afd72387c70a5d318581aea1c3b 437 Gene3D G3DSA:3.90.190.20 288 437 4.6E-56 T 18-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 SHALO_2406 d2385afd72387c70a5d318581aea1c3b 437 Gene3D G3DSA:3.40.1190.10 61 287 1.8E-62 T 18-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 SHALO_2709 03aedf565bd85f04a4d544833b008a87 356 Gene3D G3DSA:3.40.50.150 167 350 6.5E-108 T 18-10-2018 SHALO_2709 03aedf565bd85f04a4d544833b008a87 356 Gene3D G3DSA:1.10.10.10 4 99 1.8E-32 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_2709 03aedf565bd85f04a4d544833b008a87 356 SUPERFAMILY SSF46785 20 100 4.54E-8 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SHALO_2709 03aedf565bd85f04a4d544833b008a87 356 PIRSF PIRSF005739 2 355 1.4E-5 T 18-10-2018 IPR016461 O-methyltransferase COMT-type GO:0008168 SHALO_2709 03aedf565bd85f04a4d544833b008a87 356 Gene3D G3DSA:1.20.58.1390 102 316 6.5E-108 T 18-10-2018 SHALO_2709 03aedf565bd85f04a4d544833b008a87 356 SUPERFAMILY SSF53335 100 347 2.13E-34 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_2709 03aedf565bd85f04a4d544833b008a87 356 Pfam PF00891 O-methyltransferase 182 336 4.3E-8 T 18-10-2018 IPR001077 O-methyltransferase, family 2 GO:0008171 SHALO_0970 ff829ee8eea924bbc99e47c6882033d9 556 Gene3D G3DSA:3.40.190.10 56 279 7.7E-49 T 18-10-2018 SHALO_0970 ff829ee8eea924bbc99e47c6882033d9 556 PIRSF PIRSF002741 467 520 440.0 T 18-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 SHALO_0970 ff829ee8eea924bbc99e47c6882033d9 556 PIRSF PIRSF002741 47 362 2.0E-31 T 18-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 SHALO_0970 ff829ee8eea924bbc99e47c6882033d9 556 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 80 330 3.8E-37 T 18-10-2018 IPR000914 Solute-binding protein family 5 domain SHALO_0970 ff829ee8eea924bbc99e47c6882033d9 556 Gene3D G3DSA:3.10.105.10 280 446 7.7E-49 T 18-10-2018 SHALO_0970 ff829ee8eea924bbc99e47c6882033d9 556 SUPERFAMILY SSF53850 57 526 1.7E-47 T 18-10-2018 SHALO_0109 8dcd5285d4a4965266c6f316467e3025 398 Gene3D G3DSA:1.20.272.10 221 319 7.0E-41 T 18-10-2018 SHALO_0109 8dcd5285d4a4965266c6f316467e3025 398 SMART SM00382 38 150 2.9E-13 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_0109 8dcd5285d4a4965266c6f316467e3025 398 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 9 125 3.3E-17 T 18-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 SHALO_0109 8dcd5285d4a4965266c6f316467e3025 398 Pfam PF12002 MgsA AAA+ ATPase C terminal 240 392 1.7E-54 T 18-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal SHALO_0109 8dcd5285d4a4965266c6f316467e3025 398 SUPERFAMILY SSF48019 226 394 3.12E-59 T 18-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 SHALO_0109 8dcd5285d4a4965266c6f316467e3025 398 Gene3D G3DSA:1.10.3710.10 321 398 1.4E-11 T 18-10-2018 SHALO_0109 8dcd5285d4a4965266c6f316467e3025 398 SUPERFAMILY SSF52540 5 198 3.41E-42 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0109 8dcd5285d4a4965266c6f316467e3025 398 Pfam PF16193 AAA C-terminal domain 168 239 1.2E-13 T 18-10-2018 IPR032423 AAA C-terminal domain SHALO_0109 8dcd5285d4a4965266c6f316467e3025 398 Gene3D G3DSA:3.40.50.300 3 149 2.1E-36 T 18-10-2018 SHALO_2780 dbe5c8787ac9fdab291c95fb2931cd1a 171 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 3 165 3.0E-52 T 18-10-2018 IPR023635 Peptide deformylase SHALO_2780 dbe5c8787ac9fdab291c95fb2931cd1a 171 PIRSF PIRSF004749 1 171 1.2E-47 T 18-10-2018 IPR023635 Peptide deformylase SHALO_2780 dbe5c8787ac9fdab291c95fb2931cd1a 171 SUPERFAMILY SSF56420 1 168 2.22E-54 T 18-10-2018 IPR036821 Peptide deformylase superfamily SHALO_2780 dbe5c8787ac9fdab291c95fb2931cd1a 171 Pfam PF01327 Polypeptide deformylase 3 156 2.8E-47 T 18-10-2018 IPR023635 Peptide deformylase SHALO_2780 dbe5c8787ac9fdab291c95fb2931cd1a 171 Gene3D G3DSA:3.90.45.10 1 163 2.0E-55 T 18-10-2018 IPR036821 Peptide deformylase superfamily SHALO_2780 dbe5c8787ac9fdab291c95fb2931cd1a 171 PRINTS PR01576 Peptide deformylase signature 124 153 1.5E-32 T 18-10-2018 IPR023635 Peptide deformylase SHALO_2780 dbe5c8787ac9fdab291c95fb2931cd1a 171 PRINTS PR01576 Peptide deformylase signature 105 123 1.5E-32 T 18-10-2018 IPR023635 Peptide deformylase SHALO_2780 dbe5c8787ac9fdab291c95fb2931cd1a 171 PRINTS PR01576 Peptide deformylase signature 32 61 1.5E-32 T 18-10-2018 IPR023635 Peptide deformylase SHALO_2780 dbe5c8787ac9fdab291c95fb2931cd1a 171 PRINTS PR01576 Peptide deformylase signature 93 104 1.5E-32 T 18-10-2018 IPR023635 Peptide deformylase SHALO_2780 dbe5c8787ac9fdab291c95fb2931cd1a 171 Hamap MF_00163 Peptide deformylase [def]. 1 166 27.199 T 18-10-2018 IPR023635 Peptide deformylase SHALO_0941 faa69353c0501ec041ef3a9c7b12c30f 443 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 141 189 - T 18-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_0941 faa69353c0501ec041ef3a9c7b12c30f 443 Gene3D G3DSA:2.60.40.420 92 211 4.9E-36 T 18-10-2018 IPR008972 Cupredoxin SHALO_0941 faa69353c0501ec041ef3a9c7b12c30f 443 SUPERFAMILY SSF46626 338 442 1.09E-16 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_0941 faa69353c0501ec041ef3a9c7b12c30f 443 SUPERFAMILY SSF81464 5 86 2.78E-14 T 18-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_0941 faa69353c0501ec041ef3a9c7b12c30f 443 Gene3D G3DSA:1.10.287.90 5 91 7.1E-16 T 18-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_0941 faa69353c0501ec041ef3a9c7b12c30f 443 SUPERFAMILY SSF49503 91 252 1.49E-39 T 18-10-2018 IPR008972 Cupredoxin SHALO_0941 faa69353c0501ec041ef3a9c7b12c30f 443 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 10 205 1.6E-52 T 18-10-2018 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_0941 faa69353c0501ec041ef3a9c7b12c30f 443 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 5 82 1.7E-7 T 18-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_0941 faa69353c0501ec041ef3a9c7b12c30f 443 Gene3D G3DSA:1.10.760.10 215 316 1.6E-26 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_0941 faa69353c0501ec041ef3a9c7b12c30f 443 Gene3D G3DSA:1.10.760.10 341 443 4.4E-30 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_0941 faa69353c0501ec041ef3a9c7b12c30f 443 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 122 194 7.6E-14 T 18-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_0941 faa69353c0501ec041ef3a9c7b12c30f 443 Pfam PF00034 Cytochrome c 221 315 1.4E-6 T 18-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_0941 faa69353c0501ec041ef3a9c7b12c30f 443 Pfam PF00034 Cytochrome c 349 441 1.0E-8 T 18-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_0941 faa69353c0501ec041ef3a9c7b12c30f 443 SUPERFAMILY SSF46626 217 321 2.66E-12 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_1430 00c26bf661ed2e6d2477b4c551061c7f 463 Gene3D G3DSA:1.20.200.10 138 405 1.1E-112 T 18-10-2018 SHALO_1430 00c26bf661ed2e6d2477b4c551061c7f 463 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 3 459 8.7E-239 T 18-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 SHALO_1430 00c26bf661ed2e6d2477b4c551061c7f 463 Pfam PF00206 Lyase 11 341 5.9E-114 T 18-10-2018 IPR022761 Fumarate lyase, N-terminal SHALO_1430 00c26bf661ed2e6d2477b4c551061c7f 463 Gene3D G3DSA:1.10.40.30 406 463 5.5E-25 T 18-10-2018 SHALO_1430 00c26bf661ed2e6d2477b4c551061c7f 463 Gene3D G3DSA:1.10.275.10 4 137 1.7E-59 T 18-10-2018 IPR024083 Fumarase/histidase, N-terminal SHALO_1430 00c26bf661ed2e6d2477b4c551061c7f 463 SUPERFAMILY SSF48557 3 459 2.51E-151 T 18-10-2018 IPR008948 L-Aspartase-like GO:0003824 SHALO_1430 00c26bf661ed2e6d2477b4c551061c7f 463 Hamap MF_00743 Fumarate hydratase class II [fumC]. 3 461 88.198 T 18-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 SHALO_1430 00c26bf661ed2e6d2477b4c551061c7f 463 Pfam PF10415 Fumarase C C-terminus 407 460 1.6E-22 T 18-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 SHALO_1430 00c26bf661ed2e6d2477b4c551061c7f 463 ProSitePatterns PS00163 Fumarate lyases signature. 316 325 - T 18-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 SHALO_1430 00c26bf661ed2e6d2477b4c551061c7f 463 PRINTS PR00149 Fumarate lyase superfamily signature 316 332 1.4E-32 T 18-10-2018 IPR000362 Fumarate lyase family SHALO_1430 00c26bf661ed2e6d2477b4c551061c7f 463 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 1.4E-32 T 18-10-2018 IPR000362 Fumarate lyase family SHALO_1430 00c26bf661ed2e6d2477b4c551061c7f 463 PRINTS PR00149 Fumarate lyase superfamily signature 270 297 1.4E-32 T 18-10-2018 IPR000362 Fumarate lyase family SHALO_1430 00c26bf661ed2e6d2477b4c551061c7f 463 PRINTS PR00149 Fumarate lyase superfamily signature 179 197 1.4E-32 T 18-10-2018 IPR000362 Fumarate lyase family SHALO_0336 f8f76340e18553f9dfa82ac8ef25ab07 714 Pfam PF07715 TonB-dependent Receptor Plug Domain 43 150 5.4E-23 T 18-10-2018 IPR012910 TonB-dependent receptor, plug domain SHALO_0336 f8f76340e18553f9dfa82ac8ef25ab07 714 SUPERFAMILY SSF56935 26 712 6.72E-110 T 18-10-2018 SHALO_0336 f8f76340e18553f9dfa82ac8ef25ab07 714 Gene3D G3DSA:2.170.130.10 18 161 1.7E-34 T 18-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily SHALO_0336 f8f76340e18553f9dfa82ac8ef25ab07 714 Pfam PF00593 TonB dependent receptor 290 712 8.8E-42 T 18-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel SHALO_1393 9c25aebe594d13420a7cbd122e5f2e33 415 Pfam PF02308 MgtC family 9 131 9.5E-20 T 18-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 SHALO_1393 9c25aebe594d13420a7cbd122e5f2e33 415 Pfam PF13194 Domain of unknown function (DUF4010) 180 388 7.0E-61 T 18-10-2018 IPR025105 Domain of unknown function DUF4010 SHALO_1069 a83c12b72de6697a0bc6ed645e02360d 259 Pfam PF06739 Beta-propeller repeat 69 94 6.1E-5 T 18-10-2018 IPR010620 Beta-propeller repeat SHALO_1069 a83c12b72de6697a0bc6ed645e02360d 259 SUPERFAMILY SSF101898 25 257 7.06E-32 T 18-10-2018 SHALO_1069 a83c12b72de6697a0bc6ed645e02360d 259 Gene3D G3DSA:2.120.10.30 13 164 1.6E-24 T 18-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like SHALO_1069 a83c12b72de6697a0bc6ed645e02360d 259 Gene3D G3DSA:2.120.10.30 165 259 6.2E-10 T 18-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like SHALO_2461 63f20a0a00d20a2b16ef95e6812580cb 507 Gene3D G3DSA:3.30.450.20 139 250 2.1E-30 T 18-10-2018 SHALO_2461 63f20a0a00d20a2b16ef95e6812580cb 507 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 394 500 4.3E-13 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_2461 63f20a0a00d20a2b16ef95e6812580cb 507 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 151 259 1.2E-18 T 18-10-2018 IPR000014 PAS domain SHALO_2461 63f20a0a00d20a2b16ef95e6812580cb 507 SMART SM00091 136 204 4.9E-6 T 18-10-2018 IPR000014 PAS domain SHALO_2461 63f20a0a00d20a2b16ef95e6812580cb 507 Pfam PF00512 His Kinase A (phospho-acceptor) domain 285 346 4.9E-7 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_2461 63f20a0a00d20a2b16ef95e6812580cb 507 SMART SM00387 393 503 4.6E-17 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_2461 63f20a0a00d20a2b16ef95e6812580cb 507 SUPERFAMILY SSF55785 151 250 3.06E-28 T 18-10-2018 IPR035965 PAS domain superfamily SHALO_2461 63f20a0a00d20a2b16ef95e6812580cb 507 SMART SM00388 276 347 5.0E-6 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_2461 63f20a0a00d20a2b16ef95e6812580cb 507 Pfam PF13426 PAS domain 150 251 1.1E-17 T 18-10-2018 IPR000014 PAS domain SHALO_2461 63f20a0a00d20a2b16ef95e6812580cb 507 SUPERFAMILY SSF55874 337 489 1.57E-23 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_2461 63f20a0a00d20a2b16ef95e6812580cb 507 Gene3D G3DSA:3.30.565.10 353 506 5.0E-22 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_2461 63f20a0a00d20a2b16ef95e6812580cb 507 Gene3D G3DSA:1.10.287.130 251 345 1.4E-14 T 18-10-2018 SHALO_2461 63f20a0a00d20a2b16ef95e6812580cb 507 SUPERFAMILY SSF47384 262 348 3.14E-13 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SHALO_2461 63f20a0a00d20a2b16ef95e6812580cb 507 SMART SM00086 210 253 0.0044 T 18-10-2018 IPR001610 PAC motif SHALO_0811 4ce985cf71fa7b3aca3b9c4be1ec4521 187 SUPERFAMILY SSF50249 67 131 2.14E-17 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold SHALO_0811 4ce985cf71fa7b3aca3b9c4be1ec4521 187 SMART SM01185 69 123 1.1E-23 T 18-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 SHALO_0811 4ce985cf71fa7b3aca3b9c4be1ec4521 187 SMART SM00841 131 185 1.3E-26 T 18-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 SHALO_0811 4ce985cf71fa7b3aca3b9c4be1ec4521 187 Hamap MF_00141 Elongation factor P [efp]. 3 186 46.398 T 18-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 SHALO_0811 4ce985cf71fa7b3aca3b9c4be1ec4521 187 Gene3D G3DSA:2.40.50.140 130 187 5.4E-22 T 18-10-2018 SHALO_0811 4ce985cf71fa7b3aca3b9c4be1ec4521 187 Gene3D G3DSA:2.30.30.30 1 64 6.6E-26 T 18-10-2018 IPR014722 Ribosomal protein L2, domain 2 SHALO_0811 4ce985cf71fa7b3aca3b9c4be1ec4521 187 TIGRFAM TIGR00038 efp: translation elongation factor P 6 186 1.5E-70 T 18-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 SHALO_0811 4ce985cf71fa7b3aca3b9c4be1ec4521 187 PIRSF PIRSF005901 2 187 4.9E-60 T 18-10-2018 IPR020599 Translation elongation factor P/YeiP SHALO_0811 4ce985cf71fa7b3aca3b9c4be1ec4521 187 ProSitePatterns PS01275 Elongation factor P signature. 151 170 - T 18-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site SHALO_0811 4ce985cf71fa7b3aca3b9c4be1ec4521 187 Pfam PF09285 Elongation factor P, C-terminal 131 185 3.3E-21 T 18-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 SHALO_0811 4ce985cf71fa7b3aca3b9c4be1ec4521 187 Gene3D G3DSA:2.40.50.140 66 129 7.4E-23 T 18-10-2018 SHALO_0811 4ce985cf71fa7b3aca3b9c4be1ec4521 187 SUPERFAMILY SSF50104 2 65 3.36E-21 T 18-10-2018 IPR008991 Translation protein SH3-like domain superfamily SHALO_0811 4ce985cf71fa7b3aca3b9c4be1ec4521 187 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 7 61 1.4E-25 T 18-10-2018 IPR013185 Translation elongation factor, KOW-like SHALO_0811 4ce985cf71fa7b3aca3b9c4be1ec4521 187 SUPERFAMILY SSF50249 130 186 3.64E-14 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold SHALO_0811 4ce985cf71fa7b3aca3b9c4be1ec4521 187 Pfam PF01132 Elongation factor P (EF-P) OB domain 72 123 5.3E-21 T 18-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 SHALO_2690 69af476966f1df56692316cdad2348bb 226 Gene3D G3DSA:3.40.50.2300 12 144 1.8E-23 T 18-10-2018 SHALO_2690 69af476966f1df56692316cdad2348bb 226 SUPERFAMILY SSF52172 13 141 1.57E-26 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_2690 69af476966f1df56692316cdad2348bb 226 Gene3D G3DSA:1.10.10.10 154 207 4.5E-5 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_2690 69af476966f1df56692316cdad2348bb 226 SMART SM00448 14 126 3.2E-17 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_2690 69af476966f1df56692316cdad2348bb 226 Pfam PF00072 Response regulator receiver domain 16 126 9.4E-18 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_2690 69af476966f1df56692316cdad2348bb 226 Pfam PF05732 Firmicute plasmid replication protein (RepL) 144 214 8.3E-7 T 18-10-2018 IPR008813 Plasmid replication protein, RepL GO:0006260|GO:0006276 SHALO_2430 f86f3b90a24efe792e89dbbe47f09914 237 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 208 3.6E-94 T 18-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 SHALO_2430 f86f3b90a24efe792e89dbbe47f09914 237 SUPERFAMILY SSF54821 108 206 2.35E-40 T 18-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_2430 f86f3b90a24efe792e89dbbe47f09914 237 Gene3D G3DSA:3.30.1140.32 108 208 4.2E-43 T 18-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_2430 f86f3b90a24efe792e89dbbe47f09914 237 SMART SM00322 60 125 1.0E-5 T 18-10-2018 IPR004087 K Homology domain GO:0003676 SHALO_2430 f86f3b90a24efe792e89dbbe47f09914 237 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 18-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_2430 f86f3b90a24efe792e89dbbe47f09914 237 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 1.6E-40 T 18-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_2430 f86f3b90a24efe792e89dbbe47f09914 237 Pfam PF07650 KH domain 38 109 2.3E-19 T 18-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_2430 f86f3b90a24efe792e89dbbe47f09914 237 SUPERFAMILY SSF54814 2 105 8.04E-36 T 18-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 SHALO_2430 f86f3b90a24efe792e89dbbe47f09914 237 Gene3D G3DSA:3.30.300.20 17 106 3.2E-27 T 18-10-2018 IPR015946 K homology domain-like, alpha/beta SHALO_2430 f86f3b90a24efe792e89dbbe47f09914 237 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 38.662 T 18-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 SUPERFAMILY SSF51120 2186 2338 1.83E-28 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 Gene3D G3DSA:2.150.10.10 1336 1393 3.3E-8 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1211 1229 - T 18-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1031 1049 - T 18-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1910 1928 - T 18-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 SUPERFAMILY SSF51120 1338 1496 4.19E-32 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2408 2424 0.0019 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 813 830 0.03 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2219 2235 0.0055 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1748 1761 40.0 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 999 1015 0.52 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1017 1033 0.031 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2085 2100 31.0 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1904 1921 1.1 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1034 1050 0.25 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2066 2083 0.17 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2237 2253 0.0036 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 689 704 45.0 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1551 1567 1.8 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1187 1204 0.019 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2585 2602 0.1 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1889 1903 0.42 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1205 1222 0.036 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2550 2566 0.0046 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1410 1427 0.16 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 798 811 0.27 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1359 1373 1.2 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 840 856 0.023 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1604 1621 1.9 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2264 2279 0.043 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1375 1391 0.041 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1428 1444 0.0096 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2568 2584 0.0019 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2048 2065 0.26 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1586 1603 1.4 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1623 1638 0.16 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1393 1409 0.13 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1922 1938 2.2 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 963 979 3.7 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1172 1186 2.1 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1569 1585 0.49 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF06594 Haemolysin-type calcium binding protein related domain 2140 2187 7.2E-7 T 18-10-2018 IPR010566 Haemolysin-type calcium binding-related SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF06594 Haemolysin-type calcium binding protein related domain 2326 2385 2.8E-8 T 18-10-2018 IPR010566 Haemolysin-type calcium binding-related SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF06594 Haemolysin-type calcium binding protein related domain 1102 1143 3.0E-6 T 18-10-2018 IPR010566 Haemolysin-type calcium binding-related SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF06594 Haemolysin-type calcium binding protein related domain 1986 2022 8.2E-7 T 18-10-2018 IPR010566 Haemolysin-type calcium binding-related SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF06594 Haemolysin-type calcium binding protein related domain 1804 1846 1.6E-4 T 18-10-2018 IPR010566 Haemolysin-type calcium binding-related SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF06594 Haemolysin-type calcium binding protein related domain 1289 1329 4.6E-7 T 18-10-2018 IPR010566 Haemolysin-type calcium binding-related SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF06594 Haemolysin-type calcium binding protein related domain 1678 1722 9.9E-9 T 18-10-2018 IPR010566 Haemolysin-type calcium binding-related SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF06594 Haemolysin-type calcium binding protein related domain 723 761 1.5E-9 T 18-10-2018 IPR010566 Haemolysin-type calcium binding-related SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF06594 Haemolysin-type calcium binding protein related domain 2473 2518 1.9E-6 T 18-10-2018 IPR010566 Haemolysin-type calcium binding-related SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 SUPERFAMILY SSF51120 628 761 1.7E-6 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 SUPERFAMILY SSF51120 1134 1299 3.01E-24 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1425 1443 - T 18-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2063 2081 - T 18-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 837 855 - T 18-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 SUPERFAMILY SSF51120 770 908 6.28E-26 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1619 1637 - T 18-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 SUPERFAMILY SSF51120 1737 1844 6.8E-6 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 828 846 - T 18-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 SUPERFAMILY SSF51120 2030 2188 5.36E-22 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 Gene3D G3DSA:2.150.10.10 997 1147 9.2E-28 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 Gene3D G3DSA:2.150.10.10 1734 1855 6.0E-8 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 Gene3D G3DSA:2.150.10.10 812 941 2.5E-25 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 Gene3D G3DSA:2.150.10.10 1394 1530 1.6E-27 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 Gene3D G3DSA:2.150.10.10 2376 2519 7.6E-24 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 Gene3D G3DSA:2.150.10.10 2186 2238 3.2E-11 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 Gene3D G3DSA:2.150.10.10 1586 1733 1.4E-30 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 Gene3D G3DSA:2.150.10.10 1200 1335 1.4E-28 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 Gene3D G3DSA:2.150.10.10 636 772 4.4E-15 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 Gene3D G3DSA:2.150.10.10 2041 2185 8.1E-30 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 Gene3D G3DSA:2.150.10.10 1878 2034 7.1E-28 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 Gene3D G3DSA:2.150.10.10 2520 2616 2.8E-13 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1610 1628 - T 18-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 PRINTS PR00313 NodO calcium binding signature 981 989 6.1E-9 T 18-10-2018 SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 PRINTS PR00313 NodO calcium binding signature 1017 1025 6.1E-9 T 18-10-2018 SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 PRINTS PR00313 NodO calcium binding signature 1044 1053 6.1E-9 T 18-10-2018 SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 PRINTS PR00313 NodO calcium binding signature 847 858 6.1E-9 T 18-10-2018 SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2251 2269 - T 18-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1416 1434 - T 18-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2054 2072 - T 18-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 SUPERFAMILY SSF51120 945 1146 6.8E-26 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 SUPERFAMILY SSF51120 1854 2024 2.88E-25 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 Gene3D G3DSA:2.150.10.10 1531 1585 1.9E-9 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 Gene3D G3DSA:2.150.10.10 1148 1199 1.4E-7 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 Gene3D G3DSA:2.150.10.10 942 996 1.2E-6 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1022 1040 - T 18-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2564 2582 - T 18-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1220 1238 - T 18-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 SUPERFAMILY SSF51120 2505 2608 3.92E-20 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 Gene3D G3DSA:2.150.10.10 2239 2359 3.4E-18 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 SUPERFAMILY SSF51120 1533 1721 4.32E-28 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 SUPERFAMILY SSF51120 2366 2516 7.06E-13 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_0417 3801d290557c52947d26606f49cb9ff6 2628 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1901 1919 - T 18-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_0952 127568ca9786ced8b4464c1d891b8503 174 PIRSF PIRSF006105 1 167 5.9E-44 T 18-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB SHALO_0952 127568ca9786ced8b4464c1d891b8503 174 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 24 152 2.3E-37 T 18-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB SHALO_0952 127568ca9786ced8b4464c1d891b8503 174 SUPERFAMILY SSF48695 52 157 1.96E-32 T 18-10-2018 IPR036280 Multiheme cytochrome superfamily SHALO_0952 127568ca9786ced8b4464c1d891b8503 174 Gene3D G3DSA:1.10.1130.10 69 137 3.5E-26 T 18-10-2018 SHALO_2773 fd92280c64bf0a562707abd204304185 329 Pfam PF01106 NifU-like domain 256 326 1.3E-20 T 18-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 SHALO_2773 fd92280c64bf0a562707abd204304185 329 Gene3D G3DSA:1.10.10.1100 154 208 4.0E-5 T 18-10-2018 SHALO_2773 fd92280c64bf0a562707abd204304185 329 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 262 326 7.0E-14 T 18-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 SHALO_2773 fd92280c64bf0a562707abd204304185 329 Pfam PF04324 BFD-like [2Fe-2S] binding domain 159 201 1.2E-11 T 18-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain SHALO_2773 fd92280c64bf0a562707abd204304185 329 Gene3D G3DSA:3.90.1010.10 14 153 1.6E-42 T 18-10-2018 SHALO_2773 fd92280c64bf0a562707abd204304185 329 SUPERFAMILY SSF117916 246 329 1.57E-19 T 18-10-2018 IPR034904 Fe-S cluster assembly domain superfamily SHALO_2773 fd92280c64bf0a562707abd204304185 329 Gene3D G3DSA:3.30.300.130 252 326 5.0E-18 T 18-10-2018 IPR034904 Fe-S cluster assembly domain superfamily SHALO_2773 fd92280c64bf0a562707abd204304185 329 PIRSF PIRSF000375 12 329 2.1E-107 T 18-10-2018 IPR016217 Nitrogen fixation, NifU SHALO_2773 fd92280c64bf0a562707abd204304185 329 SUPERFAMILY SSF82649 14 156 1.86E-35 T 18-10-2018 SHALO_2773 fd92280c64bf0a562707abd204304185 329 Pfam PF01592 NifU-like N terminal domain 14 149 2.0E-44 T 18-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 SHALO_2782 78fb9634f8135c4ad097f6b44640723c 465 PIRSF PIRSF017184 1 463 1.5E-96 T 18-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 SHALO_2782 78fb9634f8135c4ad097f6b44640723c 465 SUPERFAMILY SSF64153 11 206 1.14E-46 T 18-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 SHALO_2782 78fb9634f8135c4ad097f6b44640723c 465 Gene3D G3DSA:3.40.1190.20 206 465 2.0E-65 T 18-10-2018 IPR029056 Ribokinase-like SHALO_2782 78fb9634f8135c4ad097f6b44640723c 465 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 4 197 19.284 T 18-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 SHALO_2782 78fb9634f8135c4ad097f6b44640723c 465 SUPERFAMILY SSF53613 215 462 1.46E-44 T 18-10-2018 IPR029056 Ribokinase-like SHALO_2782 78fb9634f8135c4ad097f6b44640723c 465 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 4 197 6.5E-37 T 18-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 SHALO_2782 78fb9634f8135c4ad097f6b44640723c 465 Gene3D G3DSA:3.40.50.10260 2 205 1.2E-50 T 18-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 SHALO_2782 78fb9634f8135c4ad097f6b44640723c 465 Pfam PF01256 Carbohydrate kinase 234 458 2.7E-41 T 18-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 SHALO_2782 78fb9634f8135c4ad097f6b44640723c 465 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 207 462 6.2E-45 T 18-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 SHALO_2782 78fb9634f8135c4ad097f6b44640723c 465 Pfam PF03853 YjeF-related protein N-terminus 24 176 5.0E-33 T 18-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 SHALO_2782 78fb9634f8135c4ad097f6b44640723c 465 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 210 464 14.121 T 18-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 SHALO_2966 9307b1e5623d6026a352ddb1da84d793 348 Gene3D G3DSA:2.40.230.10 103 348 9.0E-82 T 18-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 SHALO_2966 9307b1e5623d6026a352ddb1da84d793 348 SUPERFAMILY SSF56931 107 347 1.44E-81 T 18-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 SHALO_2966 9307b1e5623d6026a352ddb1da84d793 348 Gene3D G3DSA:1.25.40.10 21 92 2.8E-5 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SHALO_2966 9307b1e5623d6026a352ddb1da84d793 348 Pfam PF02253 Phospholipase A1 109 346 3.0E-88 T 18-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 SHALO_2966 9307b1e5623d6026a352ddb1da84d793 348 PRINTS PR01486 Bacterial phospholipase A1 protein signature 140 157 5.1E-36 T 18-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 SHALO_2966 9307b1e5623d6026a352ddb1da84d793 348 PRINTS PR01486 Bacterial phospholipase A1 protein signature 162 178 5.1E-36 T 18-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 SHALO_2966 9307b1e5623d6026a352ddb1da84d793 348 PRINTS PR01486 Bacterial phospholipase A1 protein signature 183 202 5.1E-36 T 18-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 SHALO_2966 9307b1e5623d6026a352ddb1da84d793 348 PRINTS PR01486 Bacterial phospholipase A1 protein signature 261 279 5.1E-36 T 18-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 SHALO_2966 9307b1e5623d6026a352ddb1da84d793 348 PRINTS PR01486 Bacterial phospholipase A1 protein signature 296 313 5.1E-36 T 18-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 SHALO_2966 9307b1e5623d6026a352ddb1da84d793 348 PRINTS PR01486 Bacterial phospholipase A1 protein signature 226 244 5.1E-36 T 18-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 SHALO_2966 9307b1e5623d6026a352ddb1da84d793 348 PRINTS PR01486 Bacterial phospholipase A1 protein signature 319 339 5.1E-36 T 18-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 SHALO_2966 9307b1e5623d6026a352ddb1da84d793 348 SUPERFAMILY SSF81901 24 65 2.49E-5 T 18-10-2018 SHALO_0659 dd0327fc5938a3db62f53c0d8becd4c5 733 Hamap MF_00092 Endonuclease MutS2 [mutS2]. 1 733 18.739 T 18-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 SHALO_0659 dd0327fc5938a3db62f53c0d8becd4c5 733 SUPERFAMILY SSF48334 50 265 5.23E-5 T 18-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily SHALO_0659 dd0327fc5938a3db62f53c0d8becd4c5 733 PIRSF PIRSF005814 32 733 3.3E-98 T 18-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 SHALO_0659 dd0327fc5938a3db62f53c0d8becd4c5 733 Gene3D G3DSA:3.40.50.300 270 594 5.7E-40 T 18-10-2018 SHALO_0659 dd0327fc5938a3db62f53c0d8becd4c5 733 SMART SM00463 656 733 1.3E-7 T 18-10-2018 IPR002625 Smr domain SHALO_0659 dd0327fc5938a3db62f53c0d8becd4c5 733 Pfam PF01713 Smr domain 659 733 7.6E-17 T 18-10-2018 IPR002625 Smr domain SHALO_0659 dd0327fc5938a3db62f53c0d8becd4c5 733 SUPERFAMILY SSF160443 657 732 4.18E-11 T 18-10-2018 IPR036063 Smr domain superfamily SHALO_0659 dd0327fc5938a3db62f53c0d8becd4c5 733 SMART SM00533 2 292 2.3E-5 T 18-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 SHALO_0659 dd0327fc5938a3db62f53c0d8becd4c5 733 Pfam PF00488 MutS domain V 305 482 5.8E-17 T 18-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 SHALO_0659 dd0327fc5938a3db62f53c0d8becd4c5 733 SMART SM00534 301 485 4.0E-28 T 18-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 SHALO_0659 dd0327fc5938a3db62f53c0d8becd4c5 733 SUPERFAMILY SSF52540 274 488 1.95E-25 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0659 dd0327fc5938a3db62f53c0d8becd4c5 733 Gene3D G3DSA:3.30.1370.110 648 733 2.8E-20 T 18-10-2018 SHALO_1862 5c280cf987cdf42d02fdbf9a8fdebddf 219 SUPERFAMILY SSF46894 129 218 2.15E-13 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHALO_1862 5c280cf987cdf42d02fdbf9a8fdebddf 219 SUPERFAMILY SSF52172 1 125 4.41E-35 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_1862 5c280cf987cdf42d02fdbf9a8fdebddf 219 Pfam PF00072 Response regulator receiver domain 4 111 3.1E-23 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_1862 5c280cf987cdf42d02fdbf9a8fdebddf 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 144 217 2.5E-11 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_1862 5c280cf987cdf42d02fdbf9a8fdebddf 219 Gene3D G3DSA:1.10.10.10 127 219 1.3E-14 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_1862 5c280cf987cdf42d02fdbf9a8fdebddf 219 SMART SM00862 143 217 1.6E-8 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_1862 5c280cf987cdf42d02fdbf9a8fdebddf 219 SMART SM00448 2 111 3.2E-35 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_1862 5c280cf987cdf42d02fdbf9a8fdebddf 219 Gene3D G3DSA:3.40.50.2300 1 120 4.6E-33 T 18-10-2018 SHALO_2978 19a6743d6237e3e0eceaefbc9bcbe779 939 Pfam PF00384 Molybdopterin oxidoreductase 111 651 6.6E-38 T 18-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_2978 19a6743d6237e3e0eceaefbc9bcbe779 939 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 843 870 - T 18-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 SHALO_2978 19a6743d6237e3e0eceaefbc9bcbe779 939 SUPERFAMILY SSF53706 27 645 1.15E-108 T 18-10-2018 SHALO_2978 19a6743d6237e3e0eceaefbc9bcbe779 939 Gene3D G3DSA:3.40.50.740 31 937 1.8E-215 T 18-10-2018 SHALO_2978 19a6743d6237e3e0eceaefbc9bcbe779 939 SUPERFAMILY SSF50692 800 937 1.47E-24 T 18-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily SHALO_2978 19a6743d6237e3e0eceaefbc9bcbe779 939 Pfam PF01568 Molydopterin dinucleotide binding domain 805 901 1.3E-13 T 18-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 SHALO_1345 47c14e62779aec17f19387bfabb914ce 207 Gene3D G3DSA:3.40.109.10 5 205 6.2E-57 T 18-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 SHALO_1345 47c14e62779aec17f19387bfabb914ce 207 SUPERFAMILY SSF55469 7 205 9.42E-55 T 18-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 SHALO_1345 47c14e62779aec17f19387bfabb914ce 207 Pfam PF00881 Nitroreductase family 12 186 4.8E-32 T 18-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 SHALO_0682 fe7d7b840007f0f788f1e97967e3e60d 465 SUPERFAMILY SSF50615 2 77 2.2E-21 T 18-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 SHALO_0682 fe7d7b840007f0f788f1e97967e3e60d 465 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 2 463 2.0E-253 T 18-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 SHALO_0682 fe7d7b840007f0f788f1e97967e3e60d 465 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 5 75 1.6E-17 T 18-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 SHALO_0682 fe7d7b840007f0f788f1e97967e3e60d 465 Gene3D G3DSA:1.10.1140.10 348 465 8.0E-58 T 18-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 SHALO_0682 fe7d7b840007f0f788f1e97967e3e60d 465 Gene3D G3DSA:3.40.50.300 78 347 8.2E-112 T 18-10-2018 SHALO_0682 fe7d7b840007f0f788f1e97967e3e60d 465 SUPERFAMILY SSF47917 348 464 1.26E-52 T 18-10-2018 SHALO_0682 fe7d7b840007f0f788f1e97967e3e60d 465 SMART SM00382 144 322 1.7E-4 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_0682 fe7d7b840007f0f788f1e97967e3e60d 465 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 132 345 4.1E-64 T 18-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 SHALO_0682 fe7d7b840007f0f788f1e97967e3e60d 465 Gene3D G3DSA:2.40.10.170 1 77 9.3E-27 T 18-10-2018 SHALO_0682 fe7d7b840007f0f788f1e97967e3e60d 465 SUPERFAMILY SSF52540 79 350 7.07E-91 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0682 fe7d7b840007f0f788f1e97967e3e60d 465 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 336 345 - T 18-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 SHALO_0682 fe7d7b840007f0f788f1e97967e3e60d 465 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 463 54.911 T 18-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 SHALO_1947 562402e6621571e183d23018d1acd33e 262 Pfam PF00460 Flagella basal body rod protein 5 35 7.4E-11 T 18-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 SHALO_1947 562402e6621571e183d23018d1acd33e 262 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 18-10-2018 IPR019776 Flagellar basal body rod protein, conserved site SHALO_1947 562402e6621571e183d23018d1acd33e 262 SUPERFAMILY SSF117143 92 222 1.83E-37 T 18-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like SHALO_1947 562402e6621571e183d23018d1acd33e 262 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 260 2.1E-113 T 18-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 SHALO_1947 562402e6621571e183d23018d1acd33e 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 136 2.3E-47 T 18-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G SHALO_1947 562402e6621571e183d23018d1acd33e 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 148 243 3.9E-30 T 18-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G SHALO_1947 562402e6621571e183d23018d1acd33e 262 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 260 1.4E-24 T 18-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain SHALO_2325 2835f4736d3bca45e6eb222a31c0f782 231 SUPERFAMILY SSF54719 116 230 6.81E-44 T 18-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 SHALO_2325 2835f4736d3bca45e6eb222a31c0f782 231 SUPERFAMILY SSF46609 23 113 4.06E-34 T 18-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 SHALO_2325 2835f4736d3bca45e6eb222a31c0f782 231 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 192 199 - T 18-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 SHALO_2325 2835f4736d3bca45e6eb222a31c0f782 231 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 120 225 1.2E-40 T 18-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 SHALO_2325 2835f4736d3bca45e6eb222a31c0f782 231 PIRSF PIRSF000349 3 231 8.5E-82 T 18-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 SHALO_2325 2835f4736d3bca45e6eb222a31c0f782 231 PRINTS PR01703 Manganese superoxide dismutase signature 149 157 2.1E-24 T 18-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 SHALO_2325 2835f4736d3bca45e6eb222a31c0f782 231 PRINTS PR01703 Manganese superoxide dismutase signature 95 108 2.1E-24 T 18-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 SHALO_2325 2835f4736d3bca45e6eb222a31c0f782 231 PRINTS PR01703 Manganese superoxide dismutase signature 32 43 2.1E-24 T 18-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 SHALO_2325 2835f4736d3bca45e6eb222a31c0f782 231 PRINTS PR01703 Manganese superoxide dismutase signature 190 202 2.1E-24 T 18-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 SHALO_2325 2835f4736d3bca45e6eb222a31c0f782 231 PRINTS PR01703 Manganese superoxide dismutase signature 53 66 2.1E-24 T 18-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 SHALO_2325 2835f4736d3bca45e6eb222a31c0f782 231 Gene3D G3DSA:2.40.500.20 114 231 3.5E-48 T 18-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 SHALO_2325 2835f4736d3bca45e6eb222a31c0f782 231 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 29 112 3.8E-30 T 18-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 SHALO_2325 2835f4736d3bca45e6eb222a31c0f782 231 Gene3D G3DSA:1.10.287.990 46 112 2.9E-27 T 18-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 SHALO_1251 4e7d08ed5722461c49869144861e34ed 199 Gene3D G3DSA:2.30.110.10 1 184 2.7E-36 T 18-10-2018 IPR012349 FMN-binding split barrel GO:0048037 SHALO_1251 4e7d08ed5722461c49869144861e34ed 199 Pfam PF12900 Pyridoxamine 5'-phosphate oxidase 11 161 2.5E-17 T 18-10-2018 IPR024747 Pyridoxamine 5'-phosphate oxidase-related SHALO_1251 4e7d08ed5722461c49869144861e34ed 199 SUPERFAMILY SSF50475 1 173 3.54E-35 T 18-10-2018 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1771 1789 - T 18-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2219 2237 - T 18-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 SUPERFAMILY SSF51120 1407 1498 5.89E-9 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1014 1032 - T 18-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 SUPERFAMILY SSF51120 2955 3114 2.09E-11 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 SUPERFAMILY SSF51120 3916 4102 1.16E-5 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 1036 1057 3.4E-5 T 18-10-2018 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 1775 1796 3.4E-5 T 18-10-2018 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Gene3D G3DSA:2.150.10.10 4007 4150 2.9E-5 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 SUPERFAMILY SSF51120 2159 2242 1.83E-12 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 SUPERFAMILY SSF51120 2493 2650 4.41E-19 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 SUPERFAMILY SSF51120 3509 3643 2.09E-7 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2919 2937 - T 18-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 SUPERFAMILY SSF51120 1048 1183 7.72E-8 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2095 2113 - T 18-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 SUPERFAMILY SSF51120 1518 1712 3.21E-25 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 SUPERFAMILY SSF51120 2764 2849 5.23E-11 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2210 2228 - T 18-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 SUPERFAMILY SSF51120 1823 1946 1.57E-15 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1023 1041 - T 18-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 SUPERFAMILY SSF51120 605 754 5.75E-9 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 SUPERFAMILY SSF51120 1302 1418 4.71E-10 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Gene3D G3DSA:2.150.10.10 1405 1507 2.9E-14 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Gene3D G3DSA:2.150.10.10 2750 2845 1.5E-12 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Gene3D G3DSA:2.150.10.10 1119 1210 7.4E-9 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Gene3D G3DSA:2.150.10.10 785 877 1.2E-12 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 PRINTS PR00313 NodO calcium binding signature 573 581 2.1E-6 T 18-10-2018 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 PRINTS PR00313 NodO calcium binding signature 591 599 2.1E-6 T 18-10-2018 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 PRINTS PR00313 NodO calcium binding signature 693 702 2.1E-6 T 18-10-2018 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 PRINTS PR00313 NodO calcium binding signature 458 469 2.1E-6 T 18-10-2018 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 SUPERFAMILY SSF51120 3365 3547 9.94E-17 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1780 1798 - T 18-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Gene3D G3DSA:2.150.10.10 412 547 8.4E-13 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Gene3D G3DSA:2.150.10.10 973 1077 1.1E-14 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 573 589 0.26 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2572 2589 0.039 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 451 468 0.069 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2796 2812 8.4 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1382 1398 39.0 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1008 1025 0.0051 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2326 2337 44.0 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 3569 3583 13.0 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2214 2230 0.0026 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 4028 4044 4.1 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 3397 3409 34.0 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 3509 3519 16.0 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 3557 3568 3.1 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1293 1310 0.033 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2923 2939 0.17 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1026 1041 2.9 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2107 2123 0.017 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2125 2141 8.7 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 591 603 12.0 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2814 2830 1.2 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1624 1640 0.035 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 470 486 9.0 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1962 1979 0.43 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1641 1658 0.14 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2045 2061 2.8 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2684 2701 6.0 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1170 1184 13.0 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2590 2607 3.0 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2730 2746 0.061 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 3463 3479 0.35 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2472 2488 0.072 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1258 1274 0.52 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 3811 3819 55.0 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 3237 3249 0.086 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1189 1206 13.0 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 3480 3497 1.2 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2492 2506 0.35 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1276 1292 0.33 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 4055 4066 31.0 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 716 730 43.0 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1793 1809 0.061 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1724 1740 34.0 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1864 1881 0.7 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 847 863 8.2 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1774 1791 0.06 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 4011 4026 45.0 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1981 1997 13.0 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1742 1758 0.015 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1611 1622 53.0 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2436 2452 0.13 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2703 2719 0.26 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2090 2106 0.17 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 685 700 0.35 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1882 1899 0.052 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 906 919 4.7 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 768 782 0.1 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1444 1456 42.0 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2306 2323 0.085 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2453 2470 0.16 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 3039 3055 4.6 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2196 2212 11.0 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2397 2413 0.066 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2072 2088 0.37 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2895 2912 0.033 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2610 2625 0.0072 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2956 2968 4.7 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1096 1111 3.1 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1879 1897 - T 18-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 SUPERFAMILY SSF51120 2342 2425 3.14E-9 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Gene3D G3DSA:2.150.10.10 3382 3507 1.3E-13 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Gene3D G3DSA:2.150.10.10 2140 2245 3.3E-12 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Gene3D G3DSA:2.150.10.10 2003 2090 1.8E-16 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Gene3D G3DSA:2.150.10.10 2586 2638 1.5E-10 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2901 2919 - T 18-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Gene3D G3DSA:2.150.10.10 548 649 6.9E-13 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Gene3D G3DSA:2.150.10.10 1764 1859 2.0E-14 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Gene3D G3DSA:2.150.10.10 650 767 4.0E-11 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 SUPERFAMILY SSF51120 2031 2172 3.98E-21 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Gene3D G3DSA:2.150.10.10 1508 1670 1.5E-18 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Gene3D G3DSA:2.150.10.10 1211 1316 1.5E-19 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Gene3D G3DSA:2.150.10.10 878 972 2.4E-10 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 SUPERFAMILY SSF51120 3129 3256 5.93E-6 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 SUPERFAMILY SSF51120 1923 2037 1.96E-11 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 SUPERFAMILY SSF51120 419 496 2.09E-11 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2578 2596 - T 18-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Gene3D G3DSA:2.150.10.10 2983 3121 1.1E-8 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Gene3D G3DSA:2.150.10.10 2091 2139 7.2E-11 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Gene3D G3DSA:2.150.10.10 1921 2002 8.0E-16 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Gene3D G3DSA:2.150.10.10 2246 2339 4.9E-14 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Gene3D G3DSA:2.150.10.10 1671 1763 2.3E-15 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Gene3D G3DSA:2.150.10.10 1317 1404 1.2E-11 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Gene3D G3DSA:2.150.10.10 2340 2419 5.3E-12 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Gene3D G3DSA:2.150.10.10 2496 2585 9.1E-15 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 SUPERFAMILY SSF51120 905 1071 2.02E-24 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Gene3D G3DSA:2.150.10.10 3531 3673 1.3E-6 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Gene3D G3DSA:2.150.10.10 2853 2956 4.7E-13 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Gene3D G3DSA:2.150.10.10 2420 2478 5.5E-11 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2104 2122 - T 18-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 SUPERFAMILY SSF51120 3237 3412 2.62E-8 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2708 2726 - T 18-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 771 789 - T 18-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1620 1638 - T 18-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 SUPERFAMILY SSF51120 1170 1327 1.57E-20 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1888 1906 - T 18-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 578 596 - T 18-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2726 2744 - T 18-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 Gene3D G3DSA:2.150.10.10 2639 2749 6.3E-16 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 SUPERFAMILY SSF51120 2609 2765 3.4E-21 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 SUPERFAMILY SSF51120 764 889 1.36E-14 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 SUPERFAMILY SSF51120 2247 2336 6.41E-10 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 SUPERFAMILY SSF51120 519 649 8.72E-14 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 SUPERFAMILY SSF51120 2872 2945 2.79E-14 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 SUPERFAMILY SSF51120 1720 1820 7.85E-18 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_2593 2eba0646a27f28c803d230d953a28d96 4176 SUPERFAMILY SSF51120 2429 2513 6.28E-16 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_0634 44e9623f92b619e5677e8f71edf530f4 372 Gene3D G3DSA:3.40.50.2300 139 268 1.1E-88 T 18-10-2018 SHALO_0634 44e9623f92b619e5677e8f71edf530f4 372 Pfam PF13458 Periplasmic binding protein 22 354 3.8E-52 T 18-10-2018 IPR028081 Leucine-binding protein domain SHALO_0634 44e9623f92b619e5677e8f71edf530f4 372 Gene3D G3DSA:3.40.50.2300 45 350 1.1E-88 T 18-10-2018 SHALO_0634 44e9623f92b619e5677e8f71edf530f4 372 SUPERFAMILY SSF53822 21 366 8.35E-78 T 18-10-2018 IPR028082 Periplasmic binding protein-like I SHALO_2694 2e0d18ae807696f06f00be53eb87c718 319 SUPERFAMILY SSF46548 107 235 4.71E-23 T 18-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 SHALO_2694 2e0d18ae807696f06f00be53eb87c718 319 Gene3D G3DSA:1.10.1060.10 107 238 6.7E-28 T 18-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 SHALO_2694 2e0d18ae807696f06f00be53eb87c718 319 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 3 110 5.1E-25 T 18-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_2694 2e0d18ae807696f06f00be53eb87c718 319 Pfam PF13183 4Fe-4S dicluster domain 147 218 2.1E-7 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_2694 2e0d18ae807696f06f00be53eb87c718 319 Gene3D G3DSA:3.10.20.30 1 105 1.9E-25 T 18-10-2018 IPR012675 Beta-grasp domain superfamily SHALO_2694 2e0d18ae807696f06f00be53eb87c718 319 SUPERFAMILY SSF54292 2 105 2.49E-18 T 18-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 SHALO_2694 2e0d18ae807696f06f00be53eb87c718 319 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 5 227 1.9E-49 T 18-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_0351 bc0ab323065fecaf66e1b965929292df 302 Gene3D G3DSA:3.30.70.20 226 300 2.0E-8 T 18-10-2018 SHALO_0351 bc0ab323065fecaf66e1b965929292df 302 Pfam PF12801 4Fe-4S binding domain 188 222 1.3E-5 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_0351 bc0ab323065fecaf66e1b965929292df 302 Pfam PF12801 4Fe-4S binding domain 90 132 1.0E-11 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_0351 bc0ab323065fecaf66e1b965929292df 302 SUPERFAMILY SSF54862 101 296 7.78E-16 T 18-10-2018 SHALO_0351 bc0ab323065fecaf66e1b965929292df 302 TIGRFAM TIGR02163 napH_: ferredoxin-type protein, NapH/MauN family 34 295 6.6E-85 T 18-10-2018 IPR011886 Ferredoxin-type protein, NapH/MauN family SHALO_0310 505d887501b0362a19c0923fec0ec88e 933 Pfam PF08495 FIST N domain 29 215 7.4E-28 T 18-10-2018 IPR013702 FIST domain, N-terminal SHALO_0310 505d887501b0362a19c0923fec0ec88e 933 Pfam PF00563 EAL domain 700 927 1.0E-54 T 18-10-2018 IPR001633 EAL domain SHALO_0310 505d887501b0362a19c0923fec0ec88e 933 SMART SM01204 217 346 4.6E-33 T 18-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 SHALO_0310 505d887501b0362a19c0923fec0ec88e 933 Pfam PF00990 Diguanylate cyclase, GGDEF domain 532 675 6.5E-20 T 18-10-2018 IPR000160 GGDEF domain SHALO_0310 505d887501b0362a19c0923fec0ec88e 933 SUPERFAMILY SSF55073 534 679 1.18E-22 T 18-10-2018 IPR029787 Nucleotide cyclase SHALO_0310 505d887501b0362a19c0923fec0ec88e 933 Gene3D G3DSA:3.30.450.20 403 533 1.5E-20 T 18-10-2018 SHALO_0310 505d887501b0362a19c0923fec0ec88e 933 SMART SM00267 519 681 1.5E-10 T 18-10-2018 IPR000160 GGDEF domain SHALO_0310 505d887501b0362a19c0923fec0ec88e 933 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 421 524 1.1E-12 T 18-10-2018 IPR000014 PAS domain SHALO_0310 505d887501b0362a19c0923fec0ec88e 933 SUPERFAMILY SSF55785 418 516 4.19E-20 T 18-10-2018 IPR035965 PAS domain superfamily SHALO_0310 505d887501b0362a19c0923fec0ec88e 933 SUPERFAMILY SSF141868 699 929 1.7E-62 T 18-10-2018 IPR035919 EAL domain superfamily SHALO_0310 505d887501b0362a19c0923fec0ec88e 933 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 528 664 1.6E-16 T 18-10-2018 IPR000160 GGDEF domain SHALO_0310 505d887501b0362a19c0923fec0ec88e 933 Pfam PF13426 PAS domain 416 518 3.2E-10 T 18-10-2018 IPR000014 PAS domain SHALO_0310 505d887501b0362a19c0923fec0ec88e 933 Gene3D G3DSA:3.30.70.270 534 685 7.6E-25 T 18-10-2018 SHALO_0310 505d887501b0362a19c0923fec0ec88e 933 Gene3D G3DSA:3.20.20.450 692 933 1.8E-64 T 18-10-2018 IPR035919 EAL domain superfamily SHALO_0310 505d887501b0362a19c0923fec0ec88e 933 Pfam PF10442 FIST C domain 219 345 9.7E-20 T 18-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 SHALO_0310 505d887501b0362a19c0923fec0ec88e 933 SMART SM00052 693 932 1.2E-54 T 18-10-2018 IPR001633 EAL domain SHALO_0310 505d887501b0362a19c0923fec0ec88e 933 SMART SM00897 27 216 3.0E-29 T 18-10-2018 IPR013702 FIST domain, N-terminal SHALO_0464 300107525636a7b477343493598b1d27 1198 Pfam PF00171 Aldehyde dehydrogenase family 540 982 8.8E-110 T 18-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 SHALO_0464 300107525636a7b477343493598b1d27 1198 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 754 761 - T 18-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 SHALO_0464 300107525636a7b477343493598b1d27 1198 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 782 793 - T 18-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 SHALO_0464 300107525636a7b477343493598b1d27 1198 Gene3D G3DSA:3.20.20.220 110 459 5.0E-88 T 18-10-2018 SHALO_0464 300107525636a7b477343493598b1d27 1198 Pfam PF01619 Proline dehydrogenase 134 430 2.1E-61 T 18-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 SHALO_0464 300107525636a7b477343493598b1d27 1198 SUPERFAMILY SSF53720 521 983 2.09E-99 T 18-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 SHALO_0464 300107525636a7b477343493598b1d27 1198 Gene3D G3DSA:3.40.309.10 758 949 4.6E-122 T 18-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 SHALO_0464 300107525636a7b477343493598b1d27 1198 Gene3D G3DSA:3.40.605.10 526 973 4.6E-122 T 18-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 SHALO_0464 300107525636a7b477343493598b1d27 1198 SUPERFAMILY SSF51730 132 467 2.9E-69 T 18-10-2018 IPR029041 FAD-linked oxidoreductase-like SHALO_0464 300107525636a7b477343493598b1d27 1198 PIRSF PIRSF000197 2 1198 1.7E-303 T 18-10-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 SHALO_1448 bdb921a1e9a3eaf6e5977ebd72cfe712 344 SUPERFAMILY SSF56059 128 308 1.28E-32 T 18-10-2018 SHALO_1448 bdb921a1e9a3eaf6e5977ebd72cfe712 344 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 3 311 4.9E-86 T 18-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 SHALO_1448 bdb921a1e9a3eaf6e5977ebd72cfe712 344 Gene3D G3DSA:3.30.470.20 123 302 4.9E-53 T 18-10-2018 SHALO_1448 bdb921a1e9a3eaf6e5977ebd72cfe712 344 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 1 330 28.452 T 18-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 SHALO_1448 bdb921a1e9a3eaf6e5977ebd72cfe712 344 Pfam PF07478 D-ala D-ala ligase C-terminus 137 302 2.5E-32 T 18-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 SHALO_1448 bdb921a1e9a3eaf6e5977ebd72cfe712 344 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 95 106 - T 18-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 SHALO_1448 bdb921a1e9a3eaf6e5977ebd72cfe712 344 SUPERFAMILY SSF52440 1 127 8.82E-27 T 18-10-2018 IPR016185 Pre-ATP-grasp domain superfamily SHALO_1448 bdb921a1e9a3eaf6e5977ebd72cfe712 344 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 274 301 - T 18-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 SHALO_1448 bdb921a1e9a3eaf6e5977ebd72cfe712 344 Gene3D G3DSA:3.30.1490.20 145 204 4.9E-53 T 18-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 SHALO_1448 bdb921a1e9a3eaf6e5977ebd72cfe712 344 Gene3D G3DSA:3.40.50.20 1 117 8.7E-30 T 18-10-2018 SHALO_1448 bdb921a1e9a3eaf6e5977ebd72cfe712 344 Pfam PF01820 D-ala D-ala ligase N-terminus 3 117 7.6E-21 T 18-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 SHALO_1836 4e0d50ba77df02122e1b4710c865f844 479 Gene3D G3DSA:3.40.50.10890 238 421 7.7E-138 T 18-10-2018 SHALO_1836 4e0d50ba77df02122e1b4710c865f844 479 Gene3D G3DSA:3.60.15.10 22 452 7.7E-138 T 18-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like SHALO_1836 4e0d50ba77df02122e1b4710c865f844 479 Pfam PF10996 Beta-Casp domain 270 395 1.8E-27 T 18-10-2018 IPR022712 Beta-Casp domain SHALO_1836 4e0d50ba77df02122e1b4710c865f844 479 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 409 470 6.7E-12 T 18-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain SHALO_1836 4e0d50ba77df02122e1b4710c865f844 479 SMART SM00849 29 254 6.9E-12 T 18-10-2018 IPR001279 Metallo-beta-lactamase SHALO_1836 4e0d50ba77df02122e1b4710c865f844 479 SMART SM01027 270 395 2.6E-57 T 18-10-2018 IPR022712 Beta-Casp domain SHALO_1836 4e0d50ba77df02122e1b4710c865f844 479 Pfam PF16661 Metallo-beta-lactamase superfamily domain 34 200 9.9E-12 T 18-10-2018 IPR001279 Metallo-beta-lactamase SHALO_1836 4e0d50ba77df02122e1b4710c865f844 479 SUPERFAMILY SSF56281 18 478 3.01E-120 T 18-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like SHALO_2168 a9b5266c8408166070595b0064ef65b3 248 SUPERFAMILY SSF51735 1 141 1.64E-15 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_2168 a9b5266c8408166070595b0064ef65b3 248 SUPERFAMILY SSF48179 144 247 5.61E-26 T 18-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 SHALO_2168 a9b5266c8408166070595b0064ef65b3 248 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 4 85 8.2E-5 T 18-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal SHALO_2168 a9b5266c8408166070595b0064ef65b3 248 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 144 245 9.9E-31 T 18-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 SHALO_2168 a9b5266c8408166070595b0064ef65b3 248 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 4 244 2.8E-60 T 18-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 SHALO_2168 a9b5266c8408166070595b0064ef65b3 248 Gene3D G3DSA:3.40.50.720 1 146 3.3E-24 T 18-10-2018 SHALO_2168 a9b5266c8408166070595b0064ef65b3 248 PIRSF PIRSF000193 1 248 7.5E-57 T 18-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 SHALO_2168 a9b5266c8408166070595b0064ef65b3 248 Gene3D G3DSA:1.10.3730.10 147 247 9.7E-28 T 18-10-2018 SHALO_2168 a9b5266c8408166070595b0064ef65b3 248 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 1 246 22.365 T 18-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 SHALO_1136 abf69fb94c8984b35a59c3864b59d8d9 202 Pfam PF03458 UPF0126 domain 94 167 3.1E-22 T 18-10-2018 IPR005115 Uncharacterised domain UPF0126 SHALO_1136 abf69fb94c8984b35a59c3864b59d8d9 202 Pfam PF03458 UPF0126 domain 6 74 3.6E-18 T 18-10-2018 IPR005115 Uncharacterised domain UPF0126 SHALO_1748 144d1652a9775e358906872d1db03ece 417 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 183 314 3.9E-24 T 18-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 SHALO_1748 144d1652a9775e358906872d1db03ece 417 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 188 208 3.1E-5 T 18-10-2018 IPR006073 GTP binding domain GO:0005525 SHALO_1748 144d1652a9775e358906872d1db03ece 417 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 255 273 3.1E-5 T 18-10-2018 IPR006073 GTP binding domain GO:0005525 SHALO_1748 144d1652a9775e358906872d1db03ece 417 Gene3D G3DSA:3.30.1360.120 1 90 7.7E-30 T 18-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 SHALO_1748 144d1652a9775e358906872d1db03ece 417 Pfam PF01926 50S ribosome-binding GTPase 187 304 3.2E-25 T 18-10-2018 IPR006073 GTP binding domain GO:0005525 SHALO_1748 144d1652a9775e358906872d1db03ece 417 SUPERFAMILY SSF52540 41 319 1.75E-39 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_1748 144d1652a9775e358906872d1db03ece 417 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 17 417 6.4E-112 T 18-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 SHALO_1748 144d1652a9775e358906872d1db03ece 417 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 3 417 26.189 T 18-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 SHALO_1748 144d1652a9775e358906872d1db03ece 417 Gene3D G3DSA:1.20.120.430 91 417 1.4E-87 T 18-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 SHALO_1748 144d1652a9775e358906872d1db03ece 417 Pfam PF10396 GTP-binding protein TrmE N-terminus 10 89 7.1E-27 T 18-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 SHALO_1748 144d1652a9775e358906872d1db03ece 417 Pfam PF12631 MnmE helical domain 92 414 1.9E-39 T 18-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 SHALO_1748 144d1652a9775e358906872d1db03ece 417 Gene3D G3DSA:3.40.50.300 186 346 1.4E-87 T 18-10-2018 SHALO_1208 217803d73fd964c778bbd47fd0660333 171 PIRSF PIRSF002560 1 156 5.2E-28 T 18-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 SHALO_1208 217803d73fd964c778bbd47fd0660333 171 Gene3D G3DSA:1.20.1260.10 2 167 6.3E-43 T 18-10-2018 IPR012347 Ferritin-like SHALO_1208 217803d73fd964c778bbd47fd0660333 171 Pfam PF00210 Ferritin-like domain 7 140 1.1E-25 T 18-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 SHALO_1208 217803d73fd964c778bbd47fd0660333 171 PRINTS PR00601 Bacterioferritin signature 106 126 2.9E-10 T 18-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 SHALO_1208 217803d73fd964c778bbd47fd0660333 171 PRINTS PR00601 Bacterioferritin signature 43 63 2.9E-10 T 18-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 SHALO_1208 217803d73fd964c778bbd47fd0660333 171 PRINTS PR00601 Bacterioferritin signature 127 148 2.9E-10 T 18-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 SHALO_1208 217803d73fd964c778bbd47fd0660333 171 PRINTS PR00601 Bacterioferritin signature 2 21 2.9E-10 T 18-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 SHALO_1208 217803d73fd964c778bbd47fd0660333 171 SUPERFAMILY SSF47240 1 154 4.07E-37 T 18-10-2018 IPR009078 Ferritin-like superfamily SHALO_0927 b9fec4ffb401b48ff17873038e54bd4d 996 Pfam PF13847 Methyltransferase domain 497 634 4.3E-27 T 18-10-2018 IPR025714 Methyltransferase domain SHALO_0927 b9fec4ffb401b48ff17873038e54bd4d 996 SUPERFAMILY SSF53335 484 659 3.31E-32 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_0927 b9fec4ffb401b48ff17873038e54bd4d 996 SMART SM00729 70 279 0.0036 T 18-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 SHALO_0927 b9fec4ffb401b48ff17873038e54bd4d 996 Gene3D G3DSA:3.40.50.150 465 685 9.3E-52 T 18-10-2018 SHALO_0927 b9fec4ffb401b48ff17873038e54bd4d 996 SUPERFAMILY SSF102114 72 337 1.31E-44 T 18-10-2018 SHALO_0927 b9fec4ffb401b48ff17873038e54bd4d 996 Pfam PF04055 Radical SAM superfamily 76 229 6.9E-17 T 18-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 SHALO_0927 b9fec4ffb401b48ff17873038e54bd4d 996 Pfam PF13394 4Fe-4S single cluster domain 77 156 4.0E-7 T 18-10-2018 SHALO_0927 b9fec4ffb401b48ff17873038e54bd4d 996 Gene3D G3DSA:3.20.20.70 63 352 2.0E-43 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_1206 2a4c6e195c12a537f66cd3b0393bc741 482 SUPERFAMILY SSF53720 4 477 1.26E-160 T 18-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 SHALO_1206 2a4c6e195c12a537f66cd3b0393bc741 482 Gene3D G3DSA:3.40.309.10 252 442 5.1E-172 T 18-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 SHALO_1206 2a4c6e195c12a537f66cd3b0393bc741 482 Pfam PF00171 Aldehyde dehydrogenase family 18 473 1.5E-164 T 18-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 SHALO_1206 2a4c6e195c12a537f66cd3b0393bc741 482 Gene3D G3DSA:3.40.605.10 23 467 5.1E-172 T 18-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 SHALO_1206 2a4c6e195c12a537f66cd3b0393bc741 482 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 248 255 - T 18-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 SHALO_1206 2a4c6e195c12a537f66cd3b0393bc741 482 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 276 287 - T 18-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 SHALO_2007 188d6f0c96acffafb77c85e07e8a7389 732 Gene3D G3DSA:1.10.8.60 340 425 1.4E-27 T 18-10-2018 SHALO_2007 188d6f0c96acffafb77c85e07e8a7389 732 SUPERFAMILY SSF52540 423 728 1.32E-70 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_2007 188d6f0c96acffafb77c85e07e8a7389 732 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 549 567 1.4E-39 T 18-10-2018 IPR001270 ClpA/B family GO:0005524 SHALO_2007 188d6f0c96acffafb77c85e07e8a7389 732 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 520 538 1.4E-39 T 18-10-2018 IPR001270 ClpA/B family GO:0005524 SHALO_2007 188d6f0c96acffafb77c85e07e8a7389 732 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 582 596 1.4E-39 T 18-10-2018 IPR001270 ClpA/B family GO:0005524 SHALO_2007 188d6f0c96acffafb77c85e07e8a7389 732 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 478 496 1.4E-39 T 18-10-2018 IPR001270 ClpA/B family GO:0005524 SHALO_2007 188d6f0c96acffafb77c85e07e8a7389 732 Gene3D G3DSA:1.10.8.60 637 730 4.9E-26 T 18-10-2018 SHALO_2007 188d6f0c96acffafb77c85e07e8a7389 732 Pfam PF07724 AAA domain (Cdc48 subfamily) 474 631 5.4E-47 T 18-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 SHALO_2007 188d6f0c96acffafb77c85e07e8a7389 732 SMART SM01086 637 726 1.1E-31 T 18-10-2018 IPR019489 Clp ATPase, C-terminal SHALO_2007 188d6f0c96acffafb77c85e07e8a7389 732 SMART SM00382 195 340 3.3E-12 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_2007 188d6f0c96acffafb77c85e07e8a7389 732 SMART SM00382 474 639 2.1E-11 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_2007 188d6f0c96acffafb77c85e07e8a7389 732 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 505 523 - T 18-10-2018 IPR028299 ClpA/B, conserved site 2 SHALO_2007 188d6f0c96acffafb77c85e07e8a7389 732 SUPERFAMILY SSF81923 1 137 2.35E-31 T 18-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 SHALO_2007 188d6f0c96acffafb77c85e07e8a7389 732 Gene3D G3DSA:1.10.1780.10 1 139 7.8E-25 T 18-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 SHALO_2007 188d6f0c96acffafb77c85e07e8a7389 732 Gene3D G3DSA:3.40.50.300 146 339 3.3E-67 T 18-10-2018 SHALO_2007 188d6f0c96acffafb77c85e07e8a7389 732 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 637 716 1.8E-21 T 18-10-2018 IPR019489 Clp ATPase, C-terminal SHALO_2007 188d6f0c96acffafb77c85e07e8a7389 732 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 200 330 7.4E-15 T 18-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 SHALO_2007 188d6f0c96acffafb77c85e07e8a7389 732 Gene3D G3DSA:3.40.50.300 426 635 4.3E-77 T 18-10-2018 SHALO_2007 188d6f0c96acffafb77c85e07e8a7389 732 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 18 60 5.4E-5 T 18-10-2018 IPR004176 Clp, N-terminal SHALO_2007 188d6f0c96acffafb77c85e07e8a7389 732 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 107 130 2.2 T 18-10-2018 IPR004176 Clp, N-terminal SHALO_2007 188d6f0c96acffafb77c85e07e8a7389 732 SUPERFAMILY SSF52540 157 408 7.48E-65 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_2007 188d6f0c96acffafb77c85e07e8a7389 732 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 718 0.0 T 18-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 SHALO_0527 553563b850eb6e14a4660db02de0f1f3 308 PRINTS PR00102 Ornithine carbamoyltransferase signature 118 132 4.1E-29 T 18-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 SHALO_0527 553563b850eb6e14a4660db02de0f1f3 308 PRINTS PR00102 Ornithine carbamoyltransferase signature 220 230 4.1E-29 T 18-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 SHALO_0527 553563b850eb6e14a4660db02de0f1f3 308 PRINTS PR00102 Ornithine carbamoyltransferase signature 282 293 4.1E-29 T 18-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 SHALO_0527 553563b850eb6e14a4660db02de0f1f3 308 PRINTS PR00102 Ornithine carbamoyltransferase signature 45 59 4.1E-29 T 18-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 SHALO_0527 553563b850eb6e14a4660db02de0f1f3 308 PRINTS PR00102 Ornithine carbamoyltransferase signature 78 91 4.1E-29 T 18-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 SHALO_0527 553563b850eb6e14a4660db02de0f1f3 308 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 151 301 2.1E-53 T 18-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 SHALO_0527 553563b850eb6e14a4660db02de0f1f3 308 SUPERFAMILY SSF53671 1 303 6.94E-100 T 18-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 SHALO_0527 553563b850eb6e14a4660db02de0f1f3 308 Gene3D G3DSA:3.40.50.1370 2 131 4.6E-118 T 18-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 SHALO_0527 553563b850eb6e14a4660db02de0f1f3 308 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 47 54 - T 18-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SHALO_0527 553563b850eb6e14a4660db02de0f1f3 308 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 2 302 5.6E-118 T 18-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 SHALO_0527 553563b850eb6e14a4660db02de0f1f3 308 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 2 142 4.1E-51 T 18-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 SHALO_0527 553563b850eb6e14a4660db02de0f1f3 308 Gene3D G3DSA:3.40.50.1370 132 299 4.6E-118 T 18-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 SHALO_0527 553563b850eb6e14a4660db02de0f1f3 308 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 256 265 7.8E-23 T 18-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SHALO_0527 553563b850eb6e14a4660db02de0f1f3 308 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 268 291 7.8E-23 T 18-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SHALO_0527 553563b850eb6e14a4660db02de0f1f3 308 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 47 66 7.8E-23 T 18-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SHALO_0527 553563b850eb6e14a4660db02de0f1f3 308 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 129 140 7.8E-23 T 18-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SHALO_0527 553563b850eb6e14a4660db02de0f1f3 308 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 1 304 79.078 T 18-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 SHALO_0265 7277a8f302b08404e98e8b834ef566c7 610 SUPERFAMILY SSF52518 305 479 1.18E-45 T 18-10-2018 IPR029061 Thiamin diphosphate-binding fold SHALO_0265 7277a8f302b08404e98e8b834ef566c7 610 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 2 268 1.3E-99 T 18-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 SHALO_0265 7277a8f302b08404e98e8b834ef566c7 610 SMART SM00861 304 468 1.4E-54 T 18-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain SHALO_0265 7277a8f302b08404e98e8b834ef566c7 610 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 1 610 39.71 T 18-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 SHALO_0265 7277a8f302b08404e98e8b834ef566c7 610 Gene3D G3DSA:3.40.50.970 303 473 2.3E-58 T 18-10-2018 SHALO_0265 7277a8f302b08404e98e8b834ef566c7 610 SUPERFAMILY SSF52518 4 366 7.42E-71 T 18-10-2018 IPR029061 Thiamin diphosphate-binding fold SHALO_0265 7277a8f302b08404e98e8b834ef566c7 610 Pfam PF02780 Transketolase, C-terminal domain 479 600 4.0E-23 T 18-10-2018 IPR033248 Transketolase, C-terminal domain SHALO_0265 7277a8f302b08404e98e8b834ef566c7 610 ProSitePatterns PS00802 Transketolase signature 2. 410 426 - T 18-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 SHALO_0265 7277a8f302b08404e98e8b834ef566c7 610 SUPERFAMILY SSF52922 475 608 9.03E-24 T 18-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 SHALO_0265 7277a8f302b08404e98e8b834ef566c7 610 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 3 609 5.1E-241 T 18-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 SHALO_0265 7277a8f302b08404e98e8b834ef566c7 610 Gene3D G3DSA:3.40.50.920 478 609 2.8E-21 T 18-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 SHALO_0265 7277a8f302b08404e98e8b834ef566c7 610 Pfam PF02779 Transketolase, pyrimidine binding domain 307 464 7.0E-31 T 18-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain SHALO_0577 d4384dc8bf0eb36c37a4ed90971acef9 374 Gene3D G3DSA:3.30.1480.10 1 129 4.3E-21 T 18-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 SHALO_0577 d4384dc8bf0eb36c37a4ed90971acef9 374 Pfam PF13184 NusA-like KH domain 235 303 2.0E-23 T 18-10-2018 IPR025249 KH domain, NusA-like GO:0003723 SHALO_0577 d4384dc8bf0eb36c37a4ed90971acef9 374 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 1 371 22.985 T 18-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 SHALO_0577 d4384dc8bf0eb36c37a4ed90971acef9 374 SUPERFAMILY SSF69705 3 123 8.37E-25 T 18-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 SHALO_0577 d4384dc8bf0eb36c37a4ed90971acef9 374 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 342 1.7E-100 T 18-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 SHALO_0577 d4384dc8bf0eb36c37a4ed90971acef9 374 SUPERFAMILY SSF54814 205 282 3.4E-25 T 18-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 SHALO_0577 d4384dc8bf0eb36c37a4ed90971acef9 374 SUPERFAMILY SSF54814 286 343 1.5E-9 T 18-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 SHALO_0577 d4384dc8bf0eb36c37a4ed90971acef9 374 Gene3D G3DSA:2.40.50.140 139 203 1.1E-9 T 18-10-2018 SHALO_0577 d4384dc8bf0eb36c37a4ed90971acef9 374 Pfam PF08529 NusA N-terminal domain 4 123 3.7E-19 T 18-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 SHALO_0577 d4384dc8bf0eb36c37a4ed90971acef9 374 Gene3D G3DSA:3.30.300.20 285 347 1.0E-17 T 18-10-2018 IPR015946 K homology domain-like, alpha/beta SHALO_0577 d4384dc8bf0eb36c37a4ed90971acef9 374 SUPERFAMILY SSF50249 132 192 1.21E-7 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold SHALO_0577 d4384dc8bf0eb36c37a4ed90971acef9 374 Gene3D G3DSA:3.30.300.20 204 282 1.4E-25 T 18-10-2018 IPR015946 K homology domain-like, alpha/beta SHALO_1856 54c85817c19092b759856ac259716ab4 628 Pfam PF00512 His Kinase A (phospho-acceptor) domain 417 476 2.7E-7 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_1856 54c85817c19092b759856ac259716ab4 628 SMART SM00897 26 215 6.7E-34 T 18-10-2018 IPR013702 FIST domain, N-terminal SHALO_1856 54c85817c19092b759856ac259716ab4 628 SUPERFAMILY SSF55874 483 614 7.6E-21 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_1856 54c85817c19092b759856ac259716ab4 628 Pfam PF10442 FIST C domain 216 338 2.7E-9 T 18-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 SHALO_1856 54c85817c19092b759856ac259716ab4 628 SUPERFAMILY SSF47384 407 475 5.69E-7 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SHALO_1856 54c85817c19092b759856ac259716ab4 628 SMART SM00387 522 627 1.4E-12 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_1856 54c85817c19092b759856ac259716ab4 628 SMART SM01204 216 339 1.6E-17 T 18-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 SHALO_1856 54c85817c19092b759856ac259716ab4 628 Gene3D G3DSA:1.10.287.130 396 477 7.9E-7 T 18-10-2018 SHALO_1856 54c85817c19092b759856ac259716ab4 628 SMART SM00388 416 478 2.1E-7 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_1856 54c85817c19092b759856ac259716ab4 628 Pfam PF08495 FIST N domain 29 214 1.6E-28 T 18-10-2018 IPR013702 FIST domain, N-terminal SHALO_1856 54c85817c19092b759856ac259716ab4 628 Gene3D G3DSA:3.30.565.10 481 627 2.3E-22 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_1856 54c85817c19092b759856ac259716ab4 628 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 524 614 2.0E-8 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_0307 ae8e8d651ac92961b203a960c67f7c9a 763 SUPERFAMILY SSF53706 45 578 1.44E-136 T 18-10-2018 SHALO_0307 ae8e8d651ac92961b203a960c67f7c9a 763 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 679 706 - T 18-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 SHALO_0307 ae8e8d651ac92961b203a960c67f7c9a 763 Pfam PF01568 Molydopterin dinucleotide binding domain 642 752 4.8E-23 T 18-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 SHALO_0307 ae8e8d651ac92961b203a960c67f7c9a 763 Gene3D G3DSA:2.40.40.20 630 763 2.3E-35 T 18-10-2018 SHALO_0307 ae8e8d651ac92961b203a960c67f7c9a 763 Gene3D G3DSA:2.20.25.90 38 101 3.9E-18 T 18-10-2018 SHALO_0307 ae8e8d651ac92961b203a960c67f7c9a 763 Pfam PF00384 Molybdopterin oxidoreductase 101 537 4.7E-98 T 18-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0307 ae8e8d651ac92961b203a960c67f7c9a 763 Gene3D G3DSA:3.40.228.10 184 373 8.9E-126 T 18-10-2018 SHALO_0307 ae8e8d651ac92961b203a960c67f7c9a 763 SMART SM00926 44 98 9.6E-12 T 18-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0307 ae8e8d651ac92961b203a960c67f7c9a 763 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 478 495 - T 18-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 SHALO_0307 ae8e8d651ac92961b203a960c67f7c9a 763 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 45 97 4.6E-13 T 18-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0307 ae8e8d651ac92961b203a960c67f7c9a 763 SUPERFAMILY SSF50692 634 763 2.28E-28 T 18-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily SHALO_0307 ae8e8d651ac92961b203a960c67f7c9a 763 Gene3D G3DSA:3.40.50.740 102 563 8.9E-126 T 18-10-2018 SHALO_0307 ae8e8d651ac92961b203a960c67f7c9a 763 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 5 25 5.5E-4 T 18-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal SHALO_0677 b7a45457aef3175b4ddbda30b2750efa 140 Pfam PF00430 ATP synthase B/B' CF(0) 14 122 6.7E-16 T 18-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 SHALO_0817 1d52a5dd09b1b22a157f7d6a92bc5e0c 405 SUPERFAMILY SSF160996 188 350 1.19E-35 T 18-10-2018 SHALO_0817 1d52a5dd09b1b22a157f7d6a92bc5e0c 405 SUPERFAMILY SSF51905 2 404 1.25E-50 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SHALO_0817 1d52a5dd09b1b22a157f7d6a92bc5e0c 405 PRINTS PR00419 Adrenodoxin reductase family signature 26 39 2.5E-6 T 18-10-2018 SHALO_0817 1d52a5dd09b1b22a157f7d6a92bc5e0c 405 PRINTS PR00419 Adrenodoxin reductase family signature 3 25 2.5E-6 T 18-10-2018 SHALO_0817 1d52a5dd09b1b22a157f7d6a92bc5e0c 405 PRINTS PR00419 Adrenodoxin reductase family signature 153 167 2.5E-6 T 18-10-2018 SHALO_0817 1d52a5dd09b1b22a157f7d6a92bc5e0c 405 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 4 402 2.4E-133 T 18-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like SHALO_0817 1d52a5dd09b1b22a157f7d6a92bc5e0c 405 Pfam PF03486 HI0933-like protein 3 402 5.0E-121 T 18-10-2018 SHALO_0817 1d52a5dd09b1b22a157f7d6a92bc5e0c 405 Gene3D G3DSA:1.10.8.260 268 332 5.7E-125 T 18-10-2018 IPR023166 HI0933-like insert domain superfamily SHALO_0817 1d52a5dd09b1b22a157f7d6a92bc5e0c 405 Gene3D G3DSA:3.50.50.60 6 398 5.7E-125 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SHALO_0817 1d52a5dd09b1b22a157f7d6a92bc5e0c 405 Gene3D G3DSA:2.40.30.10 187 349 5.7E-125 T 18-10-2018 SHALO_2936 8d17efb0ec755e2dfa07d342c12fb70d 287 SUPERFAMILY SSF53850 4 265 1.33E-72 T 18-10-2018 SHALO_2936 8d17efb0ec755e2dfa07d342c12fb70d 287 Pfam PF02621 Menaquinone biosynthesis 4 260 6.3E-73 T 18-10-2018 IPR003773 Menaquinone biosynthesis enzyme SHALO_2936 8d17efb0ec755e2dfa07d342c12fb70d 287 Hamap MF_00996 1,4-dihydroxy-6-naphtoate synthase [mqnD]. 3 267 35.513 T 18-10-2018 IPR030869 1,4-dihydroxy-6-naphtoate synthase GO:0009234|GO:0016829 SHALO_2936 8d17efb0ec755e2dfa07d342c12fb70d 287 Gene3D G3DSA:3.40.190.10 7 258 8.1E-64 T 18-10-2018 SHALO_2936 8d17efb0ec755e2dfa07d342c12fb70d 287 Gene3D G3DSA:3.40.190.10 81 174 8.1E-64 T 18-10-2018 SHALO_2828 b2944147fb6e6ea7a836d241979ded17 393 Gene3D G3DSA:2.40.160.10 32 236 3.5E-8 T 18-10-2018 IPR023614 Porin domain superfamily SHALO_2828 b2944147fb6e6ea7a836d241979ded17 393 Pfam PF05538 Campylobacter major outer membrane protein 1 143 1.4E-10 T 18-10-2018 IPR008439 Campylobacter major outer membrane SHALO_2828 b2944147fb6e6ea7a836d241979ded17 393 Gene3D G3DSA:2.40.160.10 246 391 1.8E-5 T 18-10-2018 IPR023614 Porin domain superfamily SHALO_2230 3ad23f8898bb018a9dcbdbb6675bfc34 372 Gene3D G3DSA:3.40.50.720 6 337 1.9E-160 T 18-10-2018 SHALO_2230 3ad23f8898bb018a9dcbdbb6675bfc34 372 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 4 356 55.452 T 18-10-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 SHALO_2230 3ad23f8898bb018a9dcbdbb6675bfc34 372 Gene3D G3DSA:3.90.25.10 194 351 1.9E-160 T 18-10-2018 SHALO_2230 3ad23f8898bb018a9dcbdbb6675bfc34 372 SUPERFAMILY SSF51735 4 352 1.39E-80 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_2230 3ad23f8898bb018a9dcbdbb6675bfc34 372 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 4 354 5.0E-182 T 18-10-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 SHALO_2230 3ad23f8898bb018a9dcbdbb6675bfc34 372 Pfam PF16363 GDP-mannose 4,6 dehydratase 7 346 1.6E-156 T 18-10-2018 IPR016040 NAD(P)-binding domain SHALO_2605 1aff05b6076be86a79f6919002bad187 348 Pfam PF00710 Asparaginase, N-terminal 24 215 1.1E-59 T 18-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 SHALO_2605 1aff05b6076be86a79f6919002bad187 348 PRINTS PR00139 Asparaginase/glutaminase family signature 24 35 9.2E-23 T 18-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 SHALO_2605 1aff05b6076be86a79f6919002bad187 348 PRINTS PR00139 Asparaginase/glutaminase family signature 103 121 9.2E-23 T 18-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 SHALO_2605 1aff05b6076be86a79f6919002bad187 348 PRINTS PR00139 Asparaginase/glutaminase family signature 282 300 9.2E-23 T 18-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 SHALO_2605 1aff05b6076be86a79f6919002bad187 348 Gene3D G3DSA:3.40.50.1170 19 234 1.9E-87 T 18-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 SHALO_2605 1aff05b6076be86a79f6919002bad187 348 PIRSF PIRSF500176 20 348 1.5E-79 T 18-10-2018 SHALO_2605 1aff05b6076be86a79f6919002bad187 348 Gene3D G3DSA:3.40.50.40 235 346 1.3E-41 T 18-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 SHALO_2605 1aff05b6076be86a79f6919002bad187 348 PIRSF PIRSF001220 18 348 1.9E-91 T 18-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 SHALO_2605 1aff05b6076be86a79f6919002bad187 348 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 104 114 - T 18-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 SHALO_2605 1aff05b6076be86a79f6919002bad187 348 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 26 34 - T 18-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 SHALO_2605 1aff05b6076be86a79f6919002bad187 348 TIGRFAM TIGR00520 asnASE_II: L-asparaginase, type II 18 348 1.0E-137 T 18-10-2018 IPR004550 L-asparaginase, type II GO:0004067|GO:0006528 SHALO_2605 1aff05b6076be86a79f6919002bad187 348 SUPERFAMILY SSF53774 22 347 3.01E-101 T 18-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 SHALO_2605 1aff05b6076be86a79f6919002bad187 348 SMART SM00870 23 342 6.7E-140 T 18-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 SHALO_1820 c157607eb605ad8d51aa43bebc750769 544 Gene3D G3DSA:2.40.160.50 175 540 1.9E-71 T 18-10-2018 SHALO_1820 c157607eb605ad8d51aa43bebc750769 544 Pfam PF08479 POTRA domain, ShlB-type 73 148 6.4E-25 T 18-10-2018 IPR013686 Polypeptide-transport-associated, ShlB-type SHALO_1820 c157607eb605ad8d51aa43bebc750769 544 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 203 509 5.6E-71 T 18-10-2018 IPR005565 Haemolysin activator HlyB, C-terminal SHALO_1820 c157607eb605ad8d51aa43bebc750769 544 Pfam PF17287 POTRA domain 156 198 4.2E-13 T 18-10-2018 IPR035251 ShlB, POTRA domain SHALO_1820 c157607eb605ad8d51aa43bebc750769 544 Gene3D G3DSA:3.10.20.310 60 148 3.8E-15 T 18-10-2018 SHALO_1820 c157607eb605ad8d51aa43bebc750769 544 PIRSF PIRSF029745 2 544 3.7E-118 T 18-10-2018 IPR027282 Two partner secretion pathway transporter GO:0015031 SHALO_0097 5ddc930552819e1b17e7f0bf79015b72 233 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 231 1.2E-61 T 18-10-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 SHALO_0097 5ddc930552819e1b17e7f0bf79015b72 233 SUPERFAMILY SSF53681 1 116 1.13E-33 T 18-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 SHALO_0097 5ddc930552819e1b17e7f0bf79015b72 233 Gene3D G3DSA:3.40.50.1860 4 225 3.8E-77 T 18-10-2018 SHALO_0097 5ddc930552819e1b17e7f0bf79015b72 233 Gene3D G3DSA:3.40.50.1860 104 216 3.8E-77 T 18-10-2018 SHALO_0097 5ddc930552819e1b17e7f0bf79015b72 233 SUPERFAMILY SSF53681 104 216 6.54E-27 T 18-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 SHALO_0097 5ddc930552819e1b17e7f0bf79015b72 233 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 225 1.3E-55 T 18-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 SHALO_0097 5ddc930552819e1b17e7f0bf79015b72 233 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 194 204 - T 18-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 SHALO_1679 12d0a3e85bbe5262763c837c4ac9bc32 567 Gene3D G3DSA:3.40.50.800 4 550 3.7E-224 T 18-10-2018 IPR036621 Anticodon-binding domain superfamily SHALO_1679 12d0a3e85bbe5262763c837c4ac9bc32 567 Gene3D G3DSA:3.30.930.10 11 463 3.7E-224 T 18-10-2018 SHALO_1679 12d0a3e85bbe5262763c837c4ac9bc32 567 SUPERFAMILY SSF55681 10 472 8.23E-92 T 18-10-2018 SHALO_1679 12d0a3e85bbe5262763c837c4ac9bc32 567 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 567 37.219 T 18-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SHALO_1679 12d0a3e85bbe5262763c837c4ac9bc32 567 Pfam PF03129 Anticodon binding domain 476 564 2.1E-16 T 18-10-2018 IPR004154 Anticodon-binding SHALO_1679 12d0a3e85bbe5262763c837c4ac9bc32 567 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 562 5.1E-218 T 18-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SHALO_1679 12d0a3e85bbe5262763c837c4ac9bc32 567 Pfam PF04073 Aminoacyl-tRNA editing domain 257 370 1.9E-20 T 18-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 SHALO_1679 12d0a3e85bbe5262763c837c4ac9bc32 567 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 4.6E-16 T 18-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 SHALO_1679 12d0a3e85bbe5262763c837c4ac9bc32 567 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 4.6E-16 T 18-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 SHALO_1679 12d0a3e85bbe5262763c837c4ac9bc32 567 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 4.6E-16 T 18-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 SHALO_1679 12d0a3e85bbe5262763c837c4ac9bc32 567 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 4.6E-16 T 18-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 SHALO_1679 12d0a3e85bbe5262763c837c4ac9bc32 567 SUPERFAMILY SSF52954 461 566 1.66E-24 T 18-10-2018 SHALO_1679 12d0a3e85bbe5262763c837c4ac9bc32 567 SUPERFAMILY SSF55826 218 370 4.58E-20 T 18-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 SHALO_1679 12d0a3e85bbe5262763c837c4ac9bc32 567 Gene3D G3DSA:3.90.960.10 240 387 3.7E-224 T 18-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 SHALO_1679 12d0a3e85bbe5262763c837c4ac9bc32 567 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 455 4.4E-50 T 18-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_1321 e26e7b87a838c8749f8a89f6c3aaf42e 984 Pfam PF08269 Cache domain 38 329 8.1E-83 T 18-10-2018 IPR004010 Double Cache domain 2 SHALO_1321 e26e7b87a838c8749f8a89f6c3aaf42e 984 SMART SM00052 730 976 6.2E-101 T 18-10-2018 IPR001633 EAL domain SHALO_1321 e26e7b87a838c8749f8a89f6c3aaf42e 984 Gene3D G3DSA:3.20.20.450 733 983 3.4E-92 T 18-10-2018 IPR035919 EAL domain superfamily SHALO_1321 e26e7b87a838c8749f8a89f6c3aaf42e 984 Gene3D G3DSA:3.30.450.20 76 226 4.7E-37 T 18-10-2018 SHALO_1321 e26e7b87a838c8749f8a89f6c3aaf42e 984 SUPERFAMILY SSF55785 437 548 3.14E-10 T 18-10-2018 IPR035965 PAS domain superfamily SHALO_1321 e26e7b87a838c8749f8a89f6c3aaf42e 984 Gene3D G3DSA:3.30.450.20 419 555 2.9E-17 T 18-10-2018 SHALO_1321 e26e7b87a838c8749f8a89f6c3aaf42e 984 SMART SM00267 548 720 2.8E-62 T 18-10-2018 IPR000160 GGDEF domain SHALO_1321 e26e7b87a838c8749f8a89f6c3aaf42e 984 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 555 718 7.3E-46 T 18-10-2018 IPR000160 GGDEF domain SHALO_1321 e26e7b87a838c8749f8a89f6c3aaf42e 984 Pfam PF00563 EAL domain 736 971 3.5E-68 T 18-10-2018 IPR001633 EAL domain SHALO_1321 e26e7b87a838c8749f8a89f6c3aaf42e 984 Pfam PF08448 PAS fold 433 542 3.2E-7 T 18-10-2018 IPR013656 PAS fold-4 SHALO_1321 e26e7b87a838c8749f8a89f6c3aaf42e 984 SMART SM01049 74 168 1.1E-12 T 18-10-2018 IPR033480 Single Cache domain 2 SHALO_1321 e26e7b87a838c8749f8a89f6c3aaf42e 984 SUPERFAMILY SSF141868 735 983 3.14E-84 T 18-10-2018 IPR035919 EAL domain superfamily SHALO_1321 e26e7b87a838c8749f8a89f6c3aaf42e 984 SUPERFAMILY SSF55073 564 720 5.02E-50 T 18-10-2018 IPR029787 Nucleotide cyclase SHALO_1321 e26e7b87a838c8749f8a89f6c3aaf42e 984 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 425 548 1.5E-6 T 18-10-2018 IPR000014 PAS domain SHALO_1321 e26e7b87a838c8749f8a89f6c3aaf42e 984 Gene3D G3DSA:3.30.70.270 556 732 9.6E-59 T 18-10-2018 SHALO_1321 e26e7b87a838c8749f8a89f6c3aaf42e 984 SMART SM00091 426 492 3.4E-4 T 18-10-2018 IPR000014 PAS domain SHALO_1321 e26e7b87a838c8749f8a89f6c3aaf42e 984 Gene3D G3DSA:3.30.450.20 227 348 8.2E-30 T 18-10-2018 SHALO_1321 e26e7b87a838c8749f8a89f6c3aaf42e 984 Pfam PF00990 Diguanylate cyclase, GGDEF domain 559 715 1.9E-49 T 18-10-2018 IPR000160 GGDEF domain SHALO_0757 da0dd725ac1e0f52ad7336c55ee8b9e2 126 Gene3D G3DSA:3.40.50.2300 1 125 3.2E-35 T 18-10-2018 SHALO_0757 da0dd725ac1e0f52ad7336c55ee8b9e2 126 SMART SM00448 5 119 3.3E-29 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_0757 da0dd725ac1e0f52ad7336c55ee8b9e2 126 Pfam PF00072 Response regulator receiver domain 7 119 4.4E-25 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_0757 da0dd725ac1e0f52ad7336c55ee8b9e2 126 SUPERFAMILY SSF52172 4 124 1.57E-32 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_2289 a1b7b6b55d985011507e67ea131472b1 295 Gene3D G3DSA:3.90.550.10 1 293 6.9E-81 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_2289 a1b7b6b55d985011507e67ea131472b1 295 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 287 2.9E-146 T 18-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 SHALO_2289 a1b7b6b55d985011507e67ea131472b1 295 SUPERFAMILY SSF53448 1 287 7.21E-90 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_2289 a1b7b6b55d985011507e67ea131472b1 295 Pfam PF00483 Nucleotidyl transferase 2 241 1.2E-69 T 18-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 SHALO_0363 bc93611d18a581d54b585d2d9c6013c8 289 PIRSF PIRSF019225 159 289 1.2E-59 T 18-10-2018 IPR021195 Ubiquinol cytochrome c reductase, cytochrome c1 subunit, predicted SHALO_0363 bc93611d18a581d54b585d2d9c6013c8 289 PIRSF PIRSF019225 43 163 1.5E-39 T 18-10-2018 IPR021195 Ubiquinol cytochrome c reductase, cytochrome c1 subunit, predicted SHALO_0363 bc93611d18a581d54b585d2d9c6013c8 289 PIRSF PIRSF019225 1 46 2.2E-18 T 18-10-2018 IPR021195 Ubiquinol cytochrome c reductase, cytochrome c1 subunit, predicted SHALO_0363 bc93611d18a581d54b585d2d9c6013c8 289 Gene3D G3DSA:1.10.760.10 1 160 8.1E-15 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_0363 bc93611d18a581d54b585d2d9c6013c8 289 Pfam PF00034 Cytochrome c 52 156 1.1E-11 T 18-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_0363 bc93611d18a581d54b585d2d9c6013c8 289 Gene3D G3DSA:1.10.760.10 163 262 3.0E-10 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_0363 bc93611d18a581d54b585d2d9c6013c8 289 SUPERFAMILY SSF46626 30 157 3.49E-19 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_0363 bc93611d18a581d54b585d2d9c6013c8 289 SUPERFAMILY SSF46626 165 272 5.67E-21 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_2744 d283e9bedc756f2a4c092a1e80b0cacf 355 Pfam PF13379 NMT1-like family 40 260 1.4E-9 T 18-10-2018 SHALO_2744 d283e9bedc756f2a4c092a1e80b0cacf 355 Gene3D G3DSA:3.40.190.10 50 312 3.7E-28 T 18-10-2018 SHALO_2744 d283e9bedc756f2a4c092a1e80b0cacf 355 Gene3D G3DSA:1.10.8.450 246 284 3.7E-28 T 18-10-2018 SHALO_2744 d283e9bedc756f2a4c092a1e80b0cacf 355 TIGRFAM TIGR03427 ABC_peri_uca: ABC transporter periplasmic binding protein, urea carboxylase region 31 355 3.4E-169 T 18-10-2018 IPR017793 ABC transporter, urea utilisation-associated, substrate-binding protein SHALO_2744 d283e9bedc756f2a4c092a1e80b0cacf 355 Gene3D G3DSA:3.40.190.10 117 213 3.7E-28 T 18-10-2018 SHALO_2744 d283e9bedc756f2a4c092a1e80b0cacf 355 SUPERFAMILY SSF53850 38 255 8.34E-37 T 18-10-2018 SHALO_2754 75dd0bcf9781339b675137d3b2724e64 678 Gene3D G3DSA:3.40.1110.10 313 442 3.9E-42 T 18-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 SHALO_2754 75dd0bcf9781339b675137d3b2724e64 678 SUPERFAMILY SSF56784 299 560 2.61E-37 T 18-10-2018 IPR036412 HAD-like superfamily SHALO_2754 75dd0bcf9781339b675137d3b2724e64 678 Gene3D G3DSA:2.70.150.20 95 209 1.2E-27 T 18-10-2018 SHALO_2754 75dd0bcf9781339b675137d3b2724e64 678 SUPERFAMILY SSF81665 28 296 2.35E-11 T 18-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 SHALO_2754 75dd0bcf9781339b675137d3b2724e64 678 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 302 316 2.4E-25 T 18-10-2018 SHALO_2754 75dd0bcf9781339b675137d3b2724e64 678 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 512 531 2.4E-25 T 18-10-2018 SHALO_2754 75dd0bcf9781339b675137d3b2724e64 678 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 459 469 2.4E-25 T 18-10-2018 SHALO_2754 75dd0bcf9781339b675137d3b2724e64 678 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 151 165 2.4E-25 T 18-10-2018 SHALO_2754 75dd0bcf9781339b675137d3b2724e64 678 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 535 547 2.4E-25 T 18-10-2018 SHALO_2754 75dd0bcf9781339b675137d3b2724e64 678 Pfam PF00702 haloacid dehalogenase-like hydrolase 298 526 4.6E-30 T 18-10-2018 SHALO_2754 75dd0bcf9781339b675137d3b2724e64 678 SUPERFAMILY SSF81653 110 204 1.96E-22 T 18-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 SHALO_2754 75dd0bcf9781339b675137d3b2724e64 678 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 72 338 4.3E-31 T 18-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 SHALO_2754 75dd0bcf9781339b675137d3b2724e64 678 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 368 597 2.7E-43 T 18-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 SHALO_2754 75dd0bcf9781339b675137d3b2724e64 678 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 8 672 2.2E-304 T 18-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 SHALO_2754 75dd0bcf9781339b675137d3b2724e64 678 Gene3D G3DSA:3.40.50.1000 443 564 9.5E-25 T 18-10-2018 IPR023214 HAD superfamily SHALO_2754 75dd0bcf9781339b675137d3b2724e64 678 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 304 310 - T 18-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 SHALO_2754 75dd0bcf9781339b675137d3b2724e64 678 Pfam PF00122 E1-E2 ATPase 104 282 2.4E-37 T 18-10-2018 SHALO_2754 75dd0bcf9781339b675137d3b2724e64 678 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 8 676 38.845 T 18-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 SHALO_1899 1b0b8ffdc9d243f635110e73705a31b8 280 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 4 280 42.5 T 18-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 SHALO_1899 1b0b8ffdc9d243f635110e73705a31b8 280 Gene3D G3DSA:3.30.70.260 1 83 3.4E-14 T 18-10-2018 SHALO_1899 1b0b8ffdc9d243f635110e73705a31b8 280 Gene3D G3DSA:3.40.50.170 84 280 3.3E-65 T 18-10-2018 SHALO_1899 1b0b8ffdc9d243f635110e73705a31b8 280 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 8 280 2.7E-111 T 18-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 SHALO_1899 1b0b8ffdc9d243f635110e73705a31b8 280 SUPERFAMILY SSF53328 87 280 6.41E-57 T 18-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SHALO_1899 1b0b8ffdc9d243f635110e73705a31b8 280 PIRSF PIRSF036480 4 280 2.4E-108 T 18-10-2018 SHALO_1899 1b0b8ffdc9d243f635110e73705a31b8 280 Pfam PF00551 Formyl transferase 87 262 1.1E-45 T 18-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SHALO_1899 1b0b8ffdc9d243f635110e73705a31b8 280 SUPERFAMILY SSF55021 6 70 9.16E-8 T 18-10-2018 SHALO_1899 1b0b8ffdc9d243f635110e73705a31b8 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 232 254 6.7E-51 T 18-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 SHALO_1899 1b0b8ffdc9d243f635110e73705a31b8 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 254 279 6.7E-51 T 18-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 SHALO_1899 1b0b8ffdc9d243f635110e73705a31b8 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 9 35 6.7E-51 T 18-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 SHALO_1899 1b0b8ffdc9d243f635110e73705a31b8 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 86 108 6.7E-51 T 18-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 SHALO_1899 1b0b8ffdc9d243f635110e73705a31b8 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 108 135 6.7E-51 T 18-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 SHALO_1899 1b0b8ffdc9d243f635110e73705a31b8 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 41 53 6.7E-51 T 18-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 SHALO_2222 479f60cf7c94442ef8147e876c0c5bcc 333 Gene3D G3DSA:3.90.25.10 205 332 1.3E-59 T 18-10-2018 SHALO_2222 479f60cf7c94442ef8147e876c0c5bcc 333 SUPERFAMILY SSF51735 14 331 9.61E-56 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_2222 479f60cf7c94442ef8147e876c0c5bcc 333 Pfam PF01370 NAD dependent epimerase/dehydratase family 20 262 1.0E-30 T 18-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 SHALO_2222 479f60cf7c94442ef8147e876c0c5bcc 333 Gene3D G3DSA:3.40.50.720 20 318 1.3E-59 T 18-10-2018 SHALO_1713 32189c3103d9fdb90b67510e15689f73 628 Gene3D G3DSA:3.90.640.10 223 310 7.4E-150 T 18-10-2018 SHALO_1713 32189c3103d9fdb90b67510e15689f73 628 SUPERFAMILY SSF100934 501 601 1.82E-15 T 18-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 SHALO_1713 32189c3103d9fdb90b67510e15689f73 628 Gene3D G3DSA:2.60.34.10 377 516 3.4E-62 T 18-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 SHALO_1713 32189c3103d9fdb90b67510e15689f73 628 SUPERFAMILY SSF100920 378 534 2.75E-60 T 18-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 SHALO_1713 32189c3103d9fdb90b67510e15689f73 628 Gene3D G3DSA:3.30.420.40 179 360 7.4E-150 T 18-10-2018 SHALO_1713 32189c3103d9fdb90b67510e15689f73 628 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 18-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 SHALO_1713 32189c3103d9fdb90b67510e15689f73 628 Gene3D G3DSA:1.20.1270.10 518 603 4.9E-24 T 18-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 SHALO_1713 32189c3103d9fdb90b67510e15689f73 628 SUPERFAMILY SSF53067 186 375 4.07E-63 T 18-10-2018 SHALO_1713 32189c3103d9fdb90b67510e15689f73 628 PRINTS PR00301 70kDa heat shock protein signature 31 43 3.8E-77 T 18-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 SHALO_1713 32189c3103d9fdb90b67510e15689f73 628 PRINTS PR00301 70kDa heat shock protein signature 328 344 3.8E-77 T 18-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 SHALO_1713 32189c3103d9fdb90b67510e15689f73 628 PRINTS PR00301 70kDa heat shock protein signature 3 16 3.8E-77 T 18-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 SHALO_1713 32189c3103d9fdb90b67510e15689f73 628 PRINTS PR00301 70kDa heat shock protein signature 137 157 3.8E-77 T 18-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 SHALO_1713 32189c3103d9fdb90b67510e15689f73 628 PRINTS PR00301 70kDa heat shock protein signature 463 479 3.8E-77 T 18-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 SHALO_1713 32189c3103d9fdb90b67510e15689f73 628 PRINTS PR00301 70kDa heat shock protein signature 359 379 3.8E-77 T 18-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 SHALO_1713 32189c3103d9fdb90b67510e15689f73 628 PRINTS PR00301 70kDa heat shock protein signature 382 401 3.8E-77 T 18-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 SHALO_1713 32189c3103d9fdb90b67510e15689f73 628 PRINTS PR00301 70kDa heat shock protein signature 54 62 3.8E-77 T 18-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 SHALO_1713 32189c3103d9fdb90b67510e15689f73 628 PRINTS PR00301 70kDa heat shock protein signature 196 206 3.8E-77 T 18-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 SHALO_1713 32189c3103d9fdb90b67510e15689f73 628 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 331 345 - T 18-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 SHALO_1713 32189c3103d9fdb90b67510e15689f73 628 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 190 203 - T 18-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 SHALO_1713 32189c3103d9fdb90b67510e15689f73 628 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 600 1.6E-288 T 18-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 SHALO_1713 32189c3103d9fdb90b67510e15689f73 628 Gene3D G3DSA:3.30.420.40 5 373 7.4E-150 T 18-10-2018 SHALO_1713 32189c3103d9fdb90b67510e15689f73 628 SUPERFAMILY SSF53067 1 182 2.2E-62 T 18-10-2018 SHALO_1713 32189c3103d9fdb90b67510e15689f73 628 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 625 35.728 T 18-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 SHALO_1713 32189c3103d9fdb90b67510e15689f73 628 Pfam PF00012 Hsp70 protein 4 600 1.5E-247 T 18-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 SHALO_1889 56c5e57fe5e97ea5a41621e6776195ad 557 Pfam PF00990 Diguanylate cyclase, GGDEF domain 427 517 5.5E-8 T 18-10-2018 IPR000160 GGDEF domain SHALO_1889 56c5e57fe5e97ea5a41621e6776195ad 557 Pfam PF01966 HD domain 242 362 1.8E-18 T 18-10-2018 IPR006674 HD domain SHALO_1889 56c5e57fe5e97ea5a41621e6776195ad 557 Gene3D G3DSA:1.10.3210.10 217 408 2.8E-66 T 18-10-2018 SHALO_1889 56c5e57fe5e97ea5a41621e6776195ad 557 SUPERFAMILY SSF55073 431 536 1.02E-9 T 18-10-2018 IPR029787 Nucleotide cyclase SHALO_1889 56c5e57fe5e97ea5a41621e6776195ad 557 Pfam PF11845 Protein of unknown function (DUF3365) 21 166 8.2E-7 T 18-10-2018 IPR021796 Protein of unknown function DUF3365 SHALO_1889 56c5e57fe5e97ea5a41621e6776195ad 557 SUPERFAMILY SSF109604 217 400 2.15E-39 T 18-10-2018 SHALO_1889 56c5e57fe5e97ea5a41621e6776195ad 557 Gene3D G3DSA:3.30.70.270 418 542 1.2E-8 T 18-10-2018 SHALO_1889 56c5e57fe5e97ea5a41621e6776195ad 557 SMART SM00471 237 371 1.4E-10 T 18-10-2018 IPR003607 HD/PDEase domain SHALO_1918 a1c5f6e39d4832b6d346eacd21e5dd4e 294 Pfam PF06719 AraC-type transcriptional regulator N-terminus 28 176 2.1E-39 T 18-10-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal SHALO_1918 a1c5f6e39d4832b6d346eacd21e5dd4e 294 SUPERFAMILY SSF46689 245 291 3.45E-8 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SHALO_1918 a1c5f6e39d4832b6d346eacd21e5dd4e 294 SUPERFAMILY SSF46689 193 243 2.01E-10 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SHALO_1918 a1c5f6e39d4832b6d346eacd21e5dd4e 294 SMART SM00342 209 292 2.0E-21 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_1918 a1c5f6e39d4832b6d346eacd21e5dd4e 294 Pfam PF12833 Helix-turn-helix domain 216 289 2.9E-18 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_1918 a1c5f6e39d4832b6d346eacd21e5dd4e 294 Gene3D G3DSA:1.10.10.60 189 294 4.9E-25 T 18-10-2018 SHALO_1424 de73f936a17f07ef61a695ba0e9b32b7 377 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 16 243 6.1E-63 T 18-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 SHALO_1424 de73f936a17f07ef61a695ba0e9b32b7 377 Gene3D G3DSA:3.40.50.920 267 377 2.3E-23 T 18-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 SHALO_1424 de73f936a17f07ef61a695ba0e9b32b7 377 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 276 367 1.3E-22 T 18-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II SHALO_1424 de73f936a17f07ef61a695ba0e9b32b7 377 SUPERFAMILY SSF52922 268 376 3.01E-23 T 18-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 SHALO_1424 de73f936a17f07ef61a695ba0e9b32b7 377 Gene3D G3DSA:3.40.50.970 1 191 5.9E-65 T 18-10-2018 SHALO_1424 de73f936a17f07ef61a695ba0e9b32b7 377 SUPERFAMILY SSF52518 6 260 1.86E-67 T 18-10-2018 IPR029061 Thiamin diphosphate-binding fold SHALO_2444 30dc660b74ea2dc6b6754c7ac1a255f7 425 Pfam PF12704 MacB-like periplasmic core domain 20 217 7.4E-9 T 18-10-2018 IPR025857 MacB-like periplasmic core domain SHALO_2444 30dc660b74ea2dc6b6754c7ac1a255f7 425 Pfam PF02687 FtsX-like permease family 328 410 7.3E-7 T 18-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 SHALO_2538 6d00fce85fb13df42beb997fc72f0f15 321 SUPERFAMILY SSF46689 216 265 3.05E-6 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SHALO_2538 6d00fce85fb13df42beb997fc72f0f15 321 Gene3D G3DSA:1.10.10.60 216 318 2.7E-27 T 18-10-2018 SHALO_2538 6d00fce85fb13df42beb997fc72f0f15 321 Pfam PF12833 Helix-turn-helix domain 237 313 5.3E-20 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_2538 6d00fce85fb13df42beb997fc72f0f15 321 SUPERFAMILY SSF46689 268 313 7.62E-10 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SHALO_2538 6d00fce85fb13df42beb997fc72f0f15 321 SMART SM00342 231 314 4.3E-27 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_2232 d60016a61e87a3e5fa851f6bb7a934cf 388 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 378 3.1E-102 T 18-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 SHALO_2232 d60016a61e87a3e5fa851f6bb7a934cf 388 Gene3D G3DSA:3.40.50.720 1 193 3.1E-58 T 18-10-2018 SHALO_2232 d60016a61e87a3e5fa851f6bb7a934cf 388 SUPERFAMILY SSF52413 283 388 7.06E-28 T 18-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 SHALO_2232 d60016a61e87a3e5fa851f6bb7a934cf 388 Gene3D G3DSA:3.40.50.720 222 388 5.9E-67 T 18-10-2018 SHALO_2232 d60016a61e87a3e5fa851f6bb7a934cf 388 Gene3D G3DSA:1.20.5.100 194 220 4.1E-20 T 18-10-2018 SHALO_2232 d60016a61e87a3e5fa851f6bb7a934cf 388 SUPERFAMILY SSF48179 191 287 2.21E-30 T 18-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 SHALO_2232 d60016a61e87a3e5fa851f6bb7a934cf 388 SUPERFAMILY SSF51735 1 194 1.19E-48 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_2232 d60016a61e87a3e5fa851f6bb7a934cf 388 SMART SM00984 300 387 6.4E-12 T 18-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 SHALO_2232 d60016a61e87a3e5fa851f6bb7a934cf 388 PIRSF PIRSF000124 1 388 5.2E-141 T 18-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 SHALO_2232 d60016a61e87a3e5fa851f6bb7a934cf 388 PIRSF PIRSF500134 1 344 1.7E-120 T 18-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 SHALO_2232 d60016a61e87a3e5fa851f6bb7a934cf 388 PIRSF PIRSF500134 338 388 0.025 T 18-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 SHALO_2232 d60016a61e87a3e5fa851f6bb7a934cf 388 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 169 6.9E-34 T 18-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 SHALO_2232 d60016a61e87a3e5fa851f6bb7a934cf 388 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 192 281 8.7E-27 T 18-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 SHALO_2232 d60016a61e87a3e5fa851f6bb7a934cf 388 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 301 375 4.3E-8 T 18-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 SHALO_2724 f94b08b7904a8f352d165b63b71ae3bb 369 Gene3D G3DSA:3.40.47.10 222 364 6.0E-45 T 18-10-2018 IPR016039 Thiolase-like GO:0003824 SHALO_2724 f94b08b7904a8f352d165b63b71ae3bb 369 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 79 212 2.5E-16 T 18-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal SHALO_2724 f94b08b7904a8f352d165b63b71ae3bb 369 SMART SM00825 Beta-ketoacyl synthase 17 365 1.9E-9 T 18-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain SHALO_2724 f94b08b7904a8f352d165b63b71ae3bb 369 SUPERFAMILY SSF53901 185 365 1.81E-50 T 18-10-2018 IPR016039 Thiolase-like GO:0003824 SHALO_2724 f94b08b7904a8f352d165b63b71ae3bb 369 SUPERFAMILY SSF53901 4 213 5.21E-24 T 18-10-2018 IPR016039 Thiolase-like GO:0003824 SHALO_2724 f94b08b7904a8f352d165b63b71ae3bb 369 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 219 327 4.6E-33 T 18-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal SHALO_2724 f94b08b7904a8f352d165b63b71ae3bb 369 Gene3D G3DSA:3.40.47.10 1 216 1.4E-24 T 18-10-2018 IPR016039 Thiolase-like GO:0003824 SHALO_0230 f142afe30f75a0fc356bc6bb92c29ada 147 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 2 144 3.4E-55 T 18-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 SHALO_0230 f142afe30f75a0fc356bc6bb92c29ada 147 SUPERFAMILY SSF54637 1 144 6.29E-45 T 18-10-2018 IPR029069 HotDog domain superfamily SHALO_0230 f142afe30f75a0fc356bc6bb92c29ada 147 Pfam PF07977 FabA-like domain 11 138 8.1E-36 T 18-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 SHALO_0230 f142afe30f75a0fc356bc6bb92c29ada 147 Gene3D G3DSA:3.10.129.10 1 147 9.9E-58 T 18-10-2018 SHALO_0230 f142afe30f75a0fc356bc6bb92c29ada 147 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 2 146 33.192 T 18-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 SHALO_0077 6247e8c68668173ddc2cd3c915e9c822 523 SUPERFAMILY SSF52540 108 500 2.29E-24 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0077 6247e8c68668173ddc2cd3c915e9c822 523 Gene3D G3DSA:3.40.50.300 131 448 7.0E-38 T 18-10-2018 SHALO_0077 6247e8c68668173ddc2cd3c915e9c822 523 Gene3D G3DSA:1.10.8.80 192 300 7.0E-38 T 18-10-2018 SHALO_0077 6247e8c68668173ddc2cd3c915e9c822 523 Pfam PF10412 Type IV secretion-system coupling protein DNA-binding domain 132 442 4.9E-33 T 18-10-2018 IPR019476 Type IV secretion system coupling protein TraD, DNA-binding domain SHALO_2583 cde56a5750668d5bbf5d826c6da24a94 220 Gene3D G3DSA:1.10.3720.10 8 220 2.6E-43 T 18-10-2018 IPR035906 MetI-like superfamily SHALO_2583 cde56a5750668d5bbf5d826c6da24a94 220 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 51 220 4.8E-20 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 SHALO_2583 cde56a5750668d5bbf5d826c6da24a94 220 SUPERFAMILY SSF161098 14 206 9.42E-40 T 18-10-2018 IPR035906 MetI-like superfamily SHALO_2363 6d31f491f00791f930f4d0327ff82df6 346 Gene3D G3DSA:3.40.190.10 110 273 7.1E-55 T 18-10-2018 SHALO_2363 6d31f491f00791f930f4d0327ff82df6 346 SUPERFAMILY SSF53850 24 330 2.17E-62 T 18-10-2018 SHALO_2363 6d31f491f00791f930f4d0327ff82df6 346 Gene3D G3DSA:3.40.190.10 25 299 7.1E-55 T 18-10-2018 SHALO_2363 6d31f491f00791f930f4d0327ff82df6 346 Pfam PF12849 PBP superfamily domain 19 296 1.3E-37 T 18-10-2018 IPR024370 PBP domain SHALO_1877 900be5ffa2c3af135fb945ecc63dce33 231 Pfam PF02146 Sir2 family 9 178 9.0E-45 T 18-10-2018 IPR003000 Sirtuin family GO:0070403 SHALO_1877 900be5ffa2c3af135fb945ecc63dce33 231 Gene3D G3DSA:3.40.50.1220 4 208 2.2E-59 T 18-10-2018 SHALO_1877 900be5ffa2c3af135fb945ecc63dce33 231 SUPERFAMILY SSF52467 3 222 1.45E-57 T 18-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily SHALO_1877 900be5ffa2c3af135fb945ecc63dce33 231 Gene3D G3DSA:3.30.1600.10 18 151 2.2E-59 T 18-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily SHALO_1593 86a405ce59dda345013515cb76d7a619 236 Pfam PF00005 ABC transporter 21 167 1.4E-31 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_1593 86a405ce59dda345013515cb76d7a619 236 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_1593 86a405ce59dda345013515cb76d7a619 236 SUPERFAMILY SSF52540 5 213 1.06E-49 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_1593 86a405ce59dda345013515cb76d7a619 236 SMART SM00382 29 213 1.0E-7 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_1593 86a405ce59dda345013515cb76d7a619 236 Gene3D G3DSA:3.40.50.300 4 229 9.8E-53 T 18-10-2018 SHALO_0953 1030d0b27bd3369499ec25e3a8230fbf 171 Pfam PF00037 4Fe-4S binding domain 142 163 3.5E-6 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_0953 1030d0b27bd3369499ec25e3a8230fbf 171 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 77 88 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_0953 1030d0b27bd3369499ec25e3a8230fbf 171 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 148 159 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_0953 1030d0b27bd3369499ec25e3a8230fbf 171 Gene3D G3DSA:3.30.70.20 104 167 2.7E-10 T 18-10-2018 SHALO_0953 1030d0b27bd3369499ec25e3a8230fbf 171 Gene3D G3DSA:3.30.70.20 40 95 7.7E-8 T 18-10-2018 SHALO_0953 1030d0b27bd3369499ec25e3a8230fbf 171 SUPERFAMILY SSF54862 37 166 2.72E-17 T 18-10-2018 SHALO_1879 a25dffe1bf2a1abe2f0c4a1ce017455e 1156 Gene3D G3DSA:3.40.50.280 711 860 1.9E-38 T 18-10-2018 SHALO_1879 a25dffe1bf2a1abe2f0c4a1ce017455e 1156 SUPERFAMILY SSF56507 873 1156 1.44E-71 T 18-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 SHALO_1879 a25dffe1bf2a1abe2f0c4a1ce017455e 1156 SUPERFAMILY SSF52242 711 839 3.79E-37 T 18-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 SHALO_1879 a25dffe1bf2a1abe2f0c4a1ce017455e 1156 Pfam PF02574 Homocysteine S-methyltransferase 13 303 5.3E-58 T 18-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 SHALO_1879 a25dffe1bf2a1abe2f0c4a1ce017455e 1156 Pfam PF00809 Pterin binding enzyme 338 571 7.1E-37 T 18-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 SHALO_1879 a25dffe1bf2a1abe2f0c4a1ce017455e 1156 SUPERFAMILY SSF82282 3 377 1.57E-99 T 18-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 SHALO_1879 a25dffe1bf2a1abe2f0c4a1ce017455e 1156 SMART SM01018 627 709 2.8E-32 T 18-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 SHALO_1879 a25dffe1bf2a1abe2f0c4a1ce017455e 1156 TIGRFAM TIGR02082 metH: methionine synthase 9 1156 0.0 T 18-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 SHALO_1879 a25dffe1bf2a1abe2f0c4a1ce017455e 1156 Gene3D G3DSA:3.10.196.10 876 1156 1.7E-46 T 18-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 SHALO_1879 a25dffe1bf2a1abe2f0c4a1ce017455e 1156 Pfam PF02310 B12 binding domain 716 805 7.9E-19 T 18-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 SHALO_1879 a25dffe1bf2a1abe2f0c4a1ce017455e 1156 Gene3D G3DSA:1.10.1240.10 620 706 3.2E-22 T 18-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 SHALO_1879 a25dffe1bf2a1abe2f0c4a1ce017455e 1156 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 909 1156 7.3E-32 T 18-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 SHALO_1879 a25dffe1bf2a1abe2f0c4a1ce017455e 1156 Gene3D G3DSA:3.20.20.20 325 616 9.9E-92 T 18-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 SHALO_1879 a25dffe1bf2a1abe2f0c4a1ce017455e 1156 Gene3D G3DSA:3.20.20.330 2 314 2.2E-87 T 18-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 SHALO_1879 a25dffe1bf2a1abe2f0c4a1ce017455e 1156 Pfam PF02607 B12 binding domain 631 701 2.5E-19 T 18-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 SHALO_1879 a25dffe1bf2a1abe2f0c4a1ce017455e 1156 Gene3D G3DSA:1.10.288.10 893 952 1.7E-46 T 18-10-2018 SHALO_1879 a25dffe1bf2a1abe2f0c4a1ce017455e 1156 PIRSF PIRSF000381 1 1156 0.0 T 18-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 SHALO_1879 a25dffe1bf2a1abe2f0c4a1ce017455e 1156 SUPERFAMILY SSF47644 626 707 9.94E-20 T 18-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 SHALO_1879 a25dffe1bf2a1abe2f0c4a1ce017455e 1156 SUPERFAMILY SSF51717 335 598 1.24E-72 T 18-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 SHALO_2119 d41dac859374f704f2c6abb792f30ed7 123 SUPERFAMILY SSF54197 4 121 1.05E-25 T 18-10-2018 IPR036265 HIT-like superfamily SHALO_2119 d41dac859374f704f2c6abb792f30ed7 123 Pfam PF01230 HIT domain 3 86 6.9E-8 T 18-10-2018 IPR001310 Histidine triad (HIT) protein SHALO_2119 d41dac859374f704f2c6abb792f30ed7 123 Gene3D G3DSA:3.30.428.10 4 122 3.7E-26 T 18-10-2018 IPR036265 HIT-like superfamily SHALO_2119 d41dac859374f704f2c6abb792f30ed7 123 PIRSF PIRSF000714 2 120 3.0E-36 T 18-10-2018 IPR026026 Histidine triad hydrolase, Hint-type SHALO_2036 154ef823090962a5a2093f1a3c7f91d5 383 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 34 196 3.6E-42 T 18-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 SHALO_2036 154ef823090962a5a2093f1a3c7f91d5 383 Gene3D G3DSA:3.40.50.11720 29 197 3.1E-33 T 18-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 SHALO_2036 154ef823090962a5a2093f1a3c7f91d5 383 Gene3D G3DSA:3.40.50.2000 199 370 2.5E-42 T 18-10-2018 SHALO_2036 154ef823090962a5a2093f1a3c7f91d5 383 SUPERFAMILY SSF53756 50 328 2.83E-11 T 18-10-2018 SHALO_0259 7fc2c8804a9de80aa8caaae6acf7a5c4 576 Gene3D G3DSA:3.30.300.30 123 223 2.7E-14 T 18-10-2018 SHALO_0259 7fc2c8804a9de80aa8caaae6acf7a5c4 576 PIRSF PIRSF004862 1 564 9.5E-128 T 18-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 SHALO_0259 7fc2c8804a9de80aa8caaae6acf7a5c4 576 Pfam PF01514 Secretory protein of YscJ/FliF family 29 221 1.2E-62 T 18-10-2018 IPR006182 Secretory protein YscJ/FliF SHALO_0259 7fc2c8804a9de80aa8caaae6acf7a5c4 576 PRINTS PR01009 Flagellar M-ring protein signature 155 169 9.4E-34 T 18-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 SHALO_0259 7fc2c8804a9de80aa8caaae6acf7a5c4 576 PRINTS PR01009 Flagellar M-ring protein signature 198 216 9.4E-34 T 18-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 SHALO_0259 7fc2c8804a9de80aa8caaae6acf7a5c4 576 PRINTS PR01009 Flagellar M-ring protein signature 123 141 9.4E-34 T 18-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 SHALO_0259 7fc2c8804a9de80aa8caaae6acf7a5c4 576 PRINTS PR01009 Flagellar M-ring protein signature 270 288 9.4E-34 T 18-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 SHALO_0259 7fc2c8804a9de80aa8caaae6acf7a5c4 576 PRINTS PR01009 Flagellar M-ring protein signature 343 367 9.4E-34 T 18-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 SHALO_0259 7fc2c8804a9de80aa8caaae6acf7a5c4 576 Pfam PF08345 Flagellar M-ring protein C-terminal 257 425 3.8E-40 T 18-10-2018 IPR013556 Flagellar M-ring C-terminal SHALO_0259 7fc2c8804a9de80aa8caaae6acf7a5c4 576 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 8 562 1.5E-132 T 18-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 SHALO_1839 bc2acbd4f3d04b7eb6a9939a348b6db6 670 Pfam PF07715 TonB-dependent Receptor Plug Domain 76 183 1.1E-16 T 18-10-2018 IPR012910 TonB-dependent receptor, plug domain SHALO_1839 bc2acbd4f3d04b7eb6a9939a348b6db6 670 SUPERFAMILY SSF56935 50 670 2.88E-85 T 18-10-2018 SHALO_1839 bc2acbd4f3d04b7eb6a9939a348b6db6 670 Pfam PF00593 TonB dependent receptor 243 668 3.4E-32 T 18-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel SHALO_1839 bc2acbd4f3d04b7eb6a9939a348b6db6 670 Gene3D G3DSA:2.170.130.10 75 191 9.4E-22 T 18-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily SHALO_1839 bc2acbd4f3d04b7eb6a9939a348b6db6 670 Gene3D G3DSA:2.40.170.20 202 670 4.1E-55 T 18-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily SHALO_1468 3f46c0b79f15edfa06859cdc12ab0918 181 Pfam PF00227 Proteasome subunit 2 174 2.9E-23 T 18-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 SHALO_1468 3f46c0b79f15edfa06859cdc12ab0918 181 SUPERFAMILY SSF56235 2 176 4.89E-52 T 18-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal SHALO_1468 3f46c0b79f15edfa06859cdc12ab0918 181 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 4 176 38.359 T 18-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 SHALO_1468 3f46c0b79f15edfa06859cdc12ab0918 181 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 5 172 5.5E-75 T 18-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 SHALO_1468 3f46c0b79f15edfa06859cdc12ab0918 181 Gene3D G3DSA:3.60.20.10 5 178 8.5E-57 T 18-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal SHALO_1468 3f46c0b79f15edfa06859cdc12ab0918 181 PIRSF PIRSF039093 1 179 1.2E-79 T 18-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 SHALO_0936 f364a449c6f9c73434ca62e15464ac64 160 Gene3D G3DSA:3.40.630.30 2 160 1.2E-42 T 18-10-2018 SHALO_0936 f364a449c6f9c73434ca62e15464ac64 160 SUPERFAMILY SSF55729 1 160 1.95E-24 T 18-10-2018 IPR016181 Acyl-CoA N-acyltransferase SHALO_0936 f364a449c6f9c73434ca62e15464ac64 160 Pfam PF00583 Acetyltransferase (GNAT) family 22 133 1.1E-10 T 18-10-2018 IPR000182 GNAT domain SHALO_2713 ed00391f2a2ac518f102be84b5480608 506 Pfam PF00221 Aromatic amino acid lyase 15 478 2.3E-139 T 18-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 SHALO_2713 ed00391f2a2ac518f102be84b5480608 506 Gene3D G3DSA:1.10.275.10 1 194 3.0E-51 T 18-10-2018 IPR024083 Fumarase/histidase, N-terminal SHALO_2713 ed00391f2a2ac518f102be84b5480608 506 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 136 152 - T 18-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 SHALO_2713 ed00391f2a2ac518f102be84b5480608 506 Gene3D G3DSA:1.20.200.10 195 504 1.1E-89 T 18-10-2018 SHALO_2713 ed00391f2a2ac518f102be84b5480608 506 SUPERFAMILY SSF48557 4 505 8.63E-145 T 18-10-2018 IPR008948 L-Aspartase-like GO:0003824 SHALO_0791 3c8fb5c33edf1d02c331bfedf201fbab 941 SUPERFAMILY SSF46548 498 628 1.15E-22 T 18-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 SHALO_0791 3c8fb5c33edf1d02c331bfedf201fbab 941 Gene3D G3DSA:3.30.70.2740 398 481 8.3E-9 T 18-10-2018 SHALO_0791 3c8fb5c33edf1d02c331bfedf201fbab 941 Pfam PF02754 Cysteine-rich domain 712 805 6.9E-4 T 18-10-2018 IPR004017 Cysteine-rich domain SHALO_0791 3c8fb5c33edf1d02c331bfedf201fbab 941 SUPERFAMILY SSF56176 9 267 1.34E-51 T 18-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 SHALO_0791 3c8fb5c33edf1d02c331bfedf201fbab 941 Pfam PF02913 FAD linked oxidases, C-terminal domain 271 520 6.2E-53 T 18-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 SHALO_0791 3c8fb5c33edf1d02c331bfedf201fbab 941 Gene3D G3DSA:1.10.45.10 489 519 1.8E-5 T 18-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 SHALO_0791 3c8fb5c33edf1d02c331bfedf201fbab 941 Gene3D G3DSA:1.10.1060.10 520 639 1.8E-10 T 18-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 SHALO_0791 3c8fb5c33edf1d02c331bfedf201fbab 941 SUPERFAMILY SSF55103 272 527 4.09E-55 T 18-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 SHALO_0791 3c8fb5c33edf1d02c331bfedf201fbab 941 Pfam PF01565 FAD binding domain 44 179 2.8E-26 T 18-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 SHALO_0791 3c8fb5c33edf1d02c331bfedf201fbab 941 Pfam PF13183 4Fe-4S dicluster domain 544 616 2.5E-10 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_0791 3c8fb5c33edf1d02c331bfedf201fbab 941 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 602 613 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_0791 3c8fb5c33edf1d02c331bfedf201fbab 941 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 546 557 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_0791 3c8fb5c33edf1d02c331bfedf201fbab 941 Gene3D G3DSA:3.30.465.40 6 195 1.3E-28 T 18-10-2018 SHALO_2981 bd5746a9219d687a0454ccf548387baf 268 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 22 264 1.5E-94 T 18-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 SHALO_2981 bd5746a9219d687a0454ccf548387baf 268 Hamap MF_02040 Iron-sulfur cluster carrier protein. 15 265 35.374 T 18-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein SHALO_2981 bd5746a9219d687a0454ccf548387baf 268 Gene3D G3DSA:3.40.50.300 10 255 5.6E-79 T 18-10-2018 SHALO_2981 bd5746a9219d687a0454ccf548387baf 268 SUPERFAMILY SSF52540 19 244 2.35E-53 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_2981 bd5746a9219d687a0454ccf548387baf 268 ProSitePatterns PS01215 Mrp family signature. 129 145 - T 18-10-2018 IPR000808 Mrp, conserved site GO:0005524 SHALO_2746 6eef2815a235868c1da8d55108afdb73 223 SMART SM00448 2 113 6.8E-29 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_2746 6eef2815a235868c1da8d55108afdb73 223 SUPERFAMILY SSF46894 131 221 4.54E-20 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHALO_2746 6eef2815a235868c1da8d55108afdb73 223 Gene3D G3DSA:1.10.10.10 123 223 1.7E-24 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_2746 6eef2815a235868c1da8d55108afdb73 223 Pfam PF00072 Response regulator receiver domain 4 113 5.8E-21 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_2746 6eef2815a235868c1da8d55108afdb73 223 SUPERFAMILY SSF52172 1 128 2.85E-33 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_2746 6eef2815a235868c1da8d55108afdb73 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 220 7.5E-18 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_2746 6eef2815a235868c1da8d55108afdb73 223 SMART SM00862 144 220 6.2E-14 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_2746 6eef2815a235868c1da8d55108afdb73 223 Gene3D G3DSA:3.40.50.2300 1 122 2.6E-28 T 18-10-2018 SHALO_1736 da38e41181e3883428a20961eaf8ceed 536 Gene3D G3DSA:3.40.50.720 397 534 2.0E-27 T 18-10-2018 SHALO_1736 da38e41181e3883428a20961eaf8ceed 536 Gene3D G3DSA:1.20.1530.20 2 382 3.8E-82 T 18-10-2018 IPR038770 Sodium/solute symporter superfamily SHALO_1736 da38e41181e3883428a20961eaf8ceed 536 Pfam PF02254 TrkA-N domain 402 516 1.8E-21 T 18-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SHALO_1736 da38e41181e3883428a20961eaf8ceed 536 Pfam PF00999 Sodium/hydrogen exchanger family 8 373 5.3E-60 T 18-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 SHALO_1736 da38e41181e3883428a20961eaf8ceed 536 SUPERFAMILY SSF51735 398 532 5.21E-28 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_1697 3ed9c099517eb5260cffc732bca1ef0d 187 Gene3D G3DSA:3.40.30.10 4 185 1.0E-39 T 18-10-2018 SHALO_1697 3ed9c099517eb5260cffc732bca1ef0d 187 Pfam PF00578 AhpC/TSA family 12 135 7.7E-12 T 18-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 SHALO_1697 3ed9c099517eb5260cffc732bca1ef0d 187 SUPERFAMILY SSF52833 6 182 1.96E-37 T 18-10-2018 IPR036249 Thioredoxin-like superfamily SHALO_1696 e66a38da7bca7ac09ec47373cf756500 213 PIRSF PIRSF001435 1 212 7.5E-41 T 18-10-2018 SHALO_1696 e66a38da7bca7ac09ec47373cf756500 213 Gene3D G3DSA:1.10.340.30 24 135 2.9E-62 T 18-10-2018 SHALO_1696 e66a38da7bca7ac09ec47373cf756500 213 Gene3D G3DSA:1.10.1670.10 18 205 2.9E-62 T 18-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 SHALO_1696 e66a38da7bca7ac09ec47373cf756500 213 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 37 170 5.1E-22 T 18-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 SHALO_1696 e66a38da7bca7ac09ec47373cf756500 213 SUPERFAMILY SSF48150 8 208 2.2E-59 T 18-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 SHALO_1696 e66a38da7bca7ac09ec47373cf756500 213 Hamap MF_00942 Endonuclease III [nth]. 1 211 31.982 T 18-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 SHALO_1696 e66a38da7bca7ac09ec47373cf756500 213 SMART SM00478 41 187 1.0E-42 T 18-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 SHALO_1696 e66a38da7bca7ac09ec47373cf756500 213 TIGRFAM TIGR01083 nth: endonuclease III 7 196 4.0E-65 T 18-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 SHALO_2329 b4b4ee148441f4751c6e72df34b4b4c6 619 Pfam PF02690 Na+/Pi-cotransporter 44 183 1.4E-34 T 18-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 SHALO_2329 b4b4ee148441f4751c6e72df34b4b4c6 619 Pfam PF02690 Na+/Pi-cotransporter 210 288 2.9E-10 T 18-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 SHALO_0009 9e9cf1b082be3bed1fbc317a3049e994 315 Gene3D G3DSA:1.10.340.30 18 126 6.1E-71 T 18-10-2018 SHALO_0009 9e9cf1b082be3bed1fbc317a3049e994 315 SMART SM00478 36 179 2.5E-32 T 18-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 SHALO_0009 9e9cf1b082be3bed1fbc317a3049e994 315 Pfam PF14815 NUDIX domain 222 309 1.5E-10 T 18-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 SHALO_0009 9e9cf1b082be3bed1fbc317a3049e994 315 SUPERFAMILY SSF48150 5 201 4.4E-58 T 18-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 SHALO_0009 9e9cf1b082be3bed1fbc317a3049e994 315 SUPERFAMILY SSF55811 207 311 1.42E-9 T 18-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 SHALO_0009 9e9cf1b082be3bed1fbc317a3049e994 315 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 4 253 9.0E-89 T 18-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 SHALO_0009 9e9cf1b082be3bed1fbc317a3049e994 315 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 33 160 1.1E-14 T 18-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 SHALO_0009 9e9cf1b082be3bed1fbc317a3049e994 315 Gene3D G3DSA:1.10.1670.10 6 199 6.1E-71 T 18-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 SHALO_1990 84b3074d40339be6304a62b9c818a6c8 75 Gene3D G3DSA:1.20.58.660 1 75 4.1E-25 T 18-10-2018 SHALO_1990 84b3074d40339be6304a62b9c818a6c8 75 Pfam PF04325 Protein of unknown function (DUF465) 19 65 2.8E-13 T 18-10-2018 IPR007420 Protein of unknown function DUF465 SHALO_2409 f3c87d650746285acdb2f8ef4862f4c6 116 TIGRFAM TIGR00059 L17: ribosomal protein bL17 6 116 2.1E-45 T 18-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_2409 f3c87d650746285acdb2f8ef4862f4c6 116 SUPERFAMILY SSF64263 1 116 3.27E-45 T 18-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_2409 f3c87d650746285acdb2f8ef4862f4c6 116 Gene3D G3DSA:3.90.1030.10 1 116 1.9E-44 T 18-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_2409 f3c87d650746285acdb2f8ef4862f4c6 116 Pfam PF01196 Ribosomal protein L17 20 116 1.4E-32 T 18-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_2409 f3c87d650746285acdb2f8ef4862f4c6 116 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 25.423 T 18-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_0772 375177b3e03ba44946d84348ae675433 100 ProSitePatterns PS00605 ATP synthase c subunit signature. 58 79 - T 18-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SHALO_0772 375177b3e03ba44946d84348ae675433 100 Gene3D G3DSA:1.20.20.10 22 99 1.3E-24 T 18-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SHALO_0772 375177b3e03ba44946d84348ae675433 100 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 38 94 8.6E-16 T 18-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 SHALO_0772 375177b3e03ba44946d84348ae675433 100 Pfam PF00137 ATP synthase subunit C 29 92 3.5E-16 T 18-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 SHALO_0772 375177b3e03ba44946d84348ae675433 100 SUPERFAMILY SSF81333 23 97 1.02E-20 T 18-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily SHALO_0772 375177b3e03ba44946d84348ae675433 100 PRINTS PR00124 ATP synthase C subunit signature 68 93 1.4E-15 T 18-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SHALO_0772 375177b3e03ba44946d84348ae675433 100 PRINTS PR00124 ATP synthase C subunit signature 51 66 1.4E-15 T 18-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SHALO_0772 375177b3e03ba44946d84348ae675433 100 PRINTS PR00124 ATP synthase C subunit signature 30 49 1.4E-15 T 18-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SHALO_0772 375177b3e03ba44946d84348ae675433 100 Hamap MF_01396 ATP synthase subunit c [atpH]. 28 93 14.978 T 18-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SHALO_1689 0a9d9c00286f411b5f79afdb86904063 354 SUPERFAMILY SSF53850 73 230 7.97E-8 T 18-10-2018 SHALO_1689 0a9d9c00286f411b5f79afdb86904063 354 Gene3D G3DSA:3.40.190.170 29 333 1.6E-107 T 18-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily SHALO_1689 0a9d9c00286f411b5f79afdb86904063 354 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 32 319 9.1E-55 T 18-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 SHALO_1689 0a9d9c00286f411b5f79afdb86904063 354 Gene3D G3DSA:3.40.190.10 148 319 1.6E-107 T 18-10-2018 SHALO_1689 0a9d9c00286f411b5f79afdb86904063 354 PIRSF PIRSF039026 1 354 5.9E-118 T 18-10-2018 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like SHALO_2004 0e877b124856d0e30cb63ddc9e010059 404 Gene3D G3DSA:3.30.300.10 14 291 6.1E-132 T 18-10-2018 SHALO_2004 0e877b124856d0e30cb63ddc9e010059 404 PIRSF PIRSF000497 1 404 1.4E-134 T 18-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 SHALO_2004 0e877b124856d0e30cb63ddc9e010059 404 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 126 136 - T 18-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 SHALO_2004 0e877b124856d0e30cb63ddc9e010059 404 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 254 392 2.8E-49 T 18-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 SHALO_2004 0e877b124856d0e30cb63ddc9e010059 404 SUPERFAMILY SSF55973 6 120 1.2E-31 T 18-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 SHALO_2004 0e877b124856d0e30cb63ddc9e010059 404 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 8 401 5.4E-109 T 18-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 SHALO_2004 0e877b124856d0e30cb63ddc9e010059 404 SUPERFAMILY SSF55973 254 401 1.49E-48 T 18-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 SHALO_2004 0e877b124856d0e30cb63ddc9e010059 404 Gene3D G3DSA:3.30.300.10 130 394 6.1E-132 T 18-10-2018 SHALO_2004 0e877b124856d0e30cb63ddc9e010059 404 Pfam PF02772 S-adenosylmethionine synthetase, central domain 124 247 3.6E-28 T 18-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 SHALO_2004 0e877b124856d0e30cb63ddc9e010059 404 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 7 111 9.8E-29 T 18-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 SHALO_2004 0e877b124856d0e30cb63ddc9e010059 404 SUPERFAMILY SSF55973 123 248 7.46E-31 T 18-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 SHALO_2004 0e877b124856d0e30cb63ddc9e010059 404 Gene3D G3DSA:3.30.300.10 8 254 6.1E-132 T 18-10-2018 SHALO_0374 364da3ff7f3166aea9172682beb0ffba 408 Gene3D G3DSA:2.30.40.10 18 404 4.7E-149 T 18-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 SHALO_0374 364da3ff7f3166aea9172682beb0ffba 408 SUPERFAMILY SSF51556 59 359 1.07E-60 T 18-10-2018 IPR032466 Metal-dependent hydrolase SHALO_0374 364da3ff7f3166aea9172682beb0ffba 408 Pfam PF01979 Amidohydrolase family 56 405 9.4E-37 T 18-10-2018 IPR006680 Amidohydrolase-related GO:0016787 SHALO_0374 364da3ff7f3166aea9172682beb0ffba 408 SUPERFAMILY SSF51338 2 72 2.1E-10 T 18-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 SHALO_0374 364da3ff7f3166aea9172682beb0ffba 408 Gene3D G3DSA:3.20.20.140 61 362 4.7E-149 T 18-10-2018 SHALO_2355 14c98a318126e12b299217a247b6ca1a 466 Pfam PF00512 His Kinase A (phospho-acceptor) domain 250 314 1.8E-10 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_2355 14c98a318126e12b299217a247b6ca1a 466 SUPERFAMILY SSF55874 317 461 2.49E-30 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_2355 14c98a318126e12b299217a247b6ca1a 466 Gene3D G3DSA:1.10.287.130 215 314 2.0E-14 T 18-10-2018 SHALO_2355 14c98a318126e12b299217a247b6ca1a 466 SUPERFAMILY SSF47384 238 317 8.24E-14 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SHALO_2355 14c98a318126e12b299217a247b6ca1a 466 SMART SM00388 249 316 1.5E-13 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_2355 14c98a318126e12b299217a247b6ca1a 466 Gene3D G3DSA:3.30.565.10 318 464 2.7E-28 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_2355 14c98a318126e12b299217a247b6ca1a 466 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 363 461 1.9E-16 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_2355 14c98a318126e12b299217a247b6ca1a 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 441 5.5E-9 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_2355 14c98a318126e12b299217a247b6ca1a 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 447 460 5.5E-9 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_2355 14c98a318126e12b299217a247b6ca1a 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 404 5.5E-9 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_2355 14c98a318126e12b299217a247b6ca1a 466 SMART SM00387 359 463 3.0E-22 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_0675 1ecf59e427ce25d69b4f610e91b92b24 261 SUPERFAMILY SSF52540 1 259 6.88E-61 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0675 1ecf59e427ce25d69b4f610e91b92b24 261 Gene3D G3DSA:3.40.50.300 1 261 1.5E-76 T 18-10-2018 SHALO_0675 1ecf59e427ce25d69b4f610e91b92b24 261 Pfam PF13614 AAA domain 3 180 1.1E-66 T 18-10-2018 IPR025669 AAA domain SHALO_2143 876a566e9a05757330ab44d3ee24ab84 578 SUPERFAMILY SSF56228 2 208 1.7E-55 T 18-10-2018 IPR036503 Aldehyde ferredoxin oxidoreductase, N-terminal domain superfamily SHALO_2143 876a566e9a05757330ab44d3ee24ab84 578 Gene3D G3DSA:1.10.599.10 244 559 2.0E-64 T 18-10-2018 IPR013985 Aldehyde ferredoxin oxidoreductase, domain 3 GO:0016625|GO:0051536|GO:0055114 KEGG: 00030+1.2.7.5 SHALO_2143 876a566e9a05757330ab44d3ee24ab84 578 SUPERFAMILY SSF48310 214 576 9.68E-99 T 18-10-2018 IPR036021 Aldehyde ferredoxin oxidoreductase-like, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 SHALO_2143 876a566e9a05757330ab44d3ee24ab84 578 Gene3D G3DSA:1.10.569.10 245 422 2.0E-64 T 18-10-2018 IPR013984 Aldehyde ferredoxin oxidoreductase, domain 2 SHALO_2143 876a566e9a05757330ab44d3ee24ab84 578 Pfam PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain 5 205 7.7E-54 T 18-10-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 SHALO_2143 876a566e9a05757330ab44d3ee24ab84 578 Gene3D G3DSA:3.60.9.10 1 210 7.4E-54 T 18-10-2018 IPR036503 Aldehyde ferredoxin oxidoreductase, N-terminal domain superfamily SHALO_2143 876a566e9a05757330ab44d3ee24ab84 578 SMART SM00790 1 208 7.1E-85 T 18-10-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 SHALO_2143 876a566e9a05757330ab44d3ee24ab84 578 Pfam PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 225 559 9.6E-70 T 18-10-2018 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 SHALO_2813 4bf663318e9e6e17314fde492cca3cf0 704 SUPERFAMILY SSF47781 550 612 4.0E-13 T 18-10-2018 IPR010994 RuvA domain 2-like SHALO_2813 4bf663318e9e6e17314fde492cca3cf0 704 Pfam PF12836 Helix-hairpin-helix motif 480 544 1.6E-23 T 18-10-2018 SHALO_2813 4bf663318e9e6e17314fde492cca3cf0 704 Gene3D G3DSA:1.10.3500.10 111 486 1.8E-129 T 18-10-2018 IPR023323 Tex-like domain superfamily SHALO_2813 4bf663318e9e6e17314fde492cca3cf0 704 Gene3D G3DSA:1.10.10.650 4 108 6.2E-33 T 18-10-2018 IPR023319 Tex-like protein, HTH domain superfamily SHALO_2813 4bf663318e9e6e17314fde492cca3cf0 704 Gene3D G3DSA:2.40.50.140 617 704 1.2E-24 T 18-10-2018 SHALO_2813 4bf663318e9e6e17314fde492cca3cf0 704 SUPERFAMILY SSF47781 459 547 5.67E-23 T 18-10-2018 IPR010994 RuvA domain 2-like SHALO_2813 4bf663318e9e6e17314fde492cca3cf0 704 SUPERFAMILY SSF53098 311 458 9.86E-45 T 18-10-2018 IPR012337 Ribonuclease H-like superfamily SHALO_2813 4bf663318e9e6e17314fde492cca3cf0 704 SMART SM00316 630 702 2.4E-21 T 18-10-2018 IPR022967 RNA-binding domain, S1 SHALO_2813 4bf663318e9e6e17314fde492cca3cf0 704 SUPERFAMILY SSF50249 619 703 6.71E-21 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold SHALO_2813 4bf663318e9e6e17314fde492cca3cf0 704 Pfam PF16921 Tex protein YqgF-like domain 315 439 3.3E-50 T 18-10-2018 IPR032639 Tex protein, YqgF-like domain SHALO_2813 4bf663318e9e6e17314fde492cca3cf0 704 SUPERFAMILY SSF158832 2 310 2.22E-84 T 18-10-2018 SHALO_2813 4bf663318e9e6e17314fde492cca3cf0 704 Pfam PF00575 S1 RNA binding domain 629 702 1.7E-16 T 18-10-2018 IPR003029 S1 domain GO:0003676 SHALO_2813 4bf663318e9e6e17314fde492cca3cf0 704 Gene3D G3DSA:1.10.150.310 488 611 4.8E-40 T 18-10-2018 SHALO_2813 4bf663318e9e6e17314fde492cca3cf0 704 SMART SM00732 315 413 4.7E-31 T 18-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 SHALO_2813 4bf663318e9e6e17314fde492cca3cf0 704 Gene3D G3DSA:3.30.420.140 314 440 1.8E-129 T 18-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 SHALO_2813 4bf663318e9e6e17314fde492cca3cf0 704 Pfam PF09371 Tex-like protein N-terminal domain 9 189 9.2E-55 T 18-10-2018 IPR018974 Tex-like protein, N-terminal SHALO_0750 b7a51374c7eabda31d4aeeb15f1aa7a8 355 Pfam PF00437 Type II/IV secretion system protein 13 264 2.1E-44 T 18-10-2018 IPR001482 Type II/IV secretion system protein SHALO_0750 b7a51374c7eabda31d4aeeb15f1aa7a8 355 SMART SM00382 126 260 0.0029 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_0750 b7a51374c7eabda31d4aeeb15f1aa7a8 355 Gene3D G3DSA:3.30.450.90 1 103 3.9E-28 T 18-10-2018 SHALO_0750 b7a51374c7eabda31d4aeeb15f1aa7a8 355 SUPERFAMILY SSF52540 7 342 5.4E-67 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0750 b7a51374c7eabda31d4aeeb15f1aa7a8 355 Gene3D G3DSA:3.40.50.300 104 354 1.3E-96 T 18-10-2018 SHALO_0750 b7a51374c7eabda31d4aeeb15f1aa7a8 355 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 6 348 1.9E-133 T 18-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 SHALO_0750 b7a51374c7eabda31d4aeeb15f1aa7a8 355 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 197 211 - T 18-10-2018 IPR001482 Type II/IV secretion system protein SHALO_1941 26905d85bf7424a97df5c9f72a1d625d 484 Gene3D G3DSA:1.10.4100.10 28 461 1.8E-180 T 18-10-2018 SHALO_1941 26905d85bf7424a97df5c9f72a1d625d 484 Gene3D G3DSA:3.30.1330.120 289 427 1.8E-180 T 18-10-2018 SHALO_1941 26905d85bf7424a97df5c9f72a1d625d 484 TIGRFAM TIGR02330 prpD: 2-methylcitrate dehydratase 16 484 6.3E-264 T 18-10-2018 IPR012705 2-methylcitrate dehydratase PrpD GO:0019629|GO:0047547|GO:0051537 KEGG: 00640+4.2.1.79 SHALO_1941 26905d85bf7424a97df5c9f72a1d625d 484 Pfam PF03972 MmgE/PrpD family 20 466 6.5E-146 T 18-10-2018 IPR005656 MmgE/PrpD GO:0016829 SHALO_1941 26905d85bf7424a97df5c9f72a1d625d 484 SUPERFAMILY SSF103378 15 482 1.2E-147 T 18-10-2018 IPR036148 MmgE/PrpD superfamily GO:0016829 SHALO_0270 7a0c2d3f49161a0c31ea14132e7ef294 137 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 1 136 34.308 T 18-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SHALO_0270 7a0c2d3f49161a0c31ea14132e7ef294 137 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 112 120 - T 18-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 SHALO_0270 7a0c2d3f49161a0c31ea14132e7ef294 137 Pfam PF00334 Nucleoside diphosphate kinase 2 136 3.7E-55 T 18-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SHALO_0270 7a0c2d3f49161a0c31ea14132e7ef294 137 Gene3D G3DSA:3.30.70.141 1 137 2.3E-58 T 18-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SHALO_0270 7a0c2d3f49161a0c31ea14132e7ef294 137 SMART SM00562 1 137 7.2E-79 T 18-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SHALO_0270 7a0c2d3f49161a0c31ea14132e7ef294 137 PRINTS PR01243 Nucleoside diphosphate kinase signature 68 85 2.6E-40 T 18-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SHALO_0270 7a0c2d3f49161a0c31ea14132e7ef294 137 PRINTS PR01243 Nucleoside diphosphate kinase signature 4 26 2.6E-40 T 18-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SHALO_0270 7a0c2d3f49161a0c31ea14132e7ef294 137 PRINTS PR01243 Nucleoside diphosphate kinase signature 48 67 2.6E-40 T 18-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SHALO_0270 7a0c2d3f49161a0c31ea14132e7ef294 137 PRINTS PR01243 Nucleoside diphosphate kinase signature 89 105 2.6E-40 T 18-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SHALO_0270 7a0c2d3f49161a0c31ea14132e7ef294 137 PRINTS PR01243 Nucleoside diphosphate kinase signature 112 131 2.6E-40 T 18-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SHALO_0270 7a0c2d3f49161a0c31ea14132e7ef294 137 SUPERFAMILY SSF54919 2 136 7.99E-57 T 18-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SHALO_2102 84d70495091622f87fc191f23c2a612a 326 SUPERFAMILY SSF53850 94 231 4.81E-8 T 18-10-2018 SHALO_2102 84d70495091622f87fc191f23c2a612a 326 PIRSF PIRSF017082 1 326 3.5E-81 T 18-10-2018 IPR005064 Bordetella uptake gene GO:0030288 SHALO_2102 84d70495091622f87fc191f23c2a612a 326 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 46 324 2.2E-23 T 18-10-2018 IPR005064 Bordetella uptake gene GO:0030288 SHALO_2102 84d70495091622f87fc191f23c2a612a 326 Gene3D G3DSA:3.40.190.150 32 317 9.9E-58 T 18-10-2018 SHALO_2102 84d70495091622f87fc191f23c2a612a 326 Gene3D G3DSA:3.40.190.10 125 252 9.9E-58 T 18-10-2018 SHALO_0278 852a56319b80a8451ef6714bced7a202 83 Gene3D G3DSA:3.30.70.20 2 83 9.9E-31 T 18-10-2018 SHALO_0278 852a56319b80a8451ef6714bced7a202 83 Pfam PF00037 4Fe-4S binding domain 6 25 8.9E-6 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_0278 852a56319b80a8451ef6714bced7a202 83 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_0278 852a56319b80a8451ef6714bced7a202 83 SUPERFAMILY SSF54862 5 77 1.06E-18 T 18-10-2018 SHALO_1335 00a4c071179bfee4ed07cd5a20e14c94 610 Gene3D G3DSA:3.40.50.300 1 229 9.5E-53 T 18-10-2018 SHALO_1335 00a4c071179bfee4ed07cd5a20e14c94 610 Gene3D G3DSA:3.40.50.300 246 511 1.9E-51 T 18-10-2018 SHALO_1335 00a4c071179bfee4ed07cd5a20e14c94 610 SUPERFAMILY SSF52540 267 485 2.62E-40 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_1335 00a4c071179bfee4ed07cd5a20e14c94 610 ProSitePatterns PS00211 ABC transporters family signature. 402 416 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_1335 00a4c071179bfee4ed07cd5a20e14c94 610 Pfam PF00005 ABC transporter 300 430 5.8E-21 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_1335 00a4c071179bfee4ed07cd5a20e14c94 610 Pfam PF12848 ABC transporter 189 269 8.4E-14 T 18-10-2018 IPR032781 ABC-transporter extension domain SHALO_1335 00a4c071179bfee4ed07cd5a20e14c94 610 SUPERFAMILY SSF52540 2 200 1.22E-43 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_1335 00a4c071179bfee4ed07cd5a20e14c94 610 SMART SM00382 26 193 7.3E-11 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_1335 00a4c071179bfee4ed07cd5a20e14c94 610 SMART SM00382 308 475 9.9E-8 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_1335 00a4c071179bfee4ed07cd5a20e14c94 610 Pfam PF00005 ABC transporter 18 148 8.3E-22 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_1779 0ace6cc831806fc75a422ae15d5abcf3 668 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 595 659 1.2E-19 T 18-10-2018 IPR039561 Peptidase M15C GO:0008233 SHALO_1779 0ace6cc831806fc75a422ae15d5abcf3 668 Pfam PF12914 SH3 domain of SH3b2 type 217 249 3.3E-9 T 18-10-2018 IPR026864 SH3b2-type SH3 domain SHALO_1779 0ace6cc831806fc75a422ae15d5abcf3 668 Pfam PF00877 NlpC/P60 family 299 379 1.2E-9 T 18-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain SHALO_1779 0ace6cc831806fc75a422ae15d5abcf3 668 Pfam PF12912 NLPC_P60 stabilising domain, N term 9 121 1.1E-20 T 18-10-2018 IPR025606 NLPC/P60, N-terminal domain SHALO_1779 0ace6cc831806fc75a422ae15d5abcf3 668 Gene3D G3DSA:3.90.1720.10 272 439 7.1E-43 T 18-10-2018 SHALO_1779 0ace6cc831806fc75a422ae15d5abcf3 668 Pfam PF12913 SH3 domain (SH3b1 type) 144 196 3.9E-25 T 18-10-2018 IPR039439 SH3b1 domain SHALO_1779 0ace6cc831806fc75a422ae15d5abcf3 668 SUPERFAMILY SSF55166 577 662 7.85E-21 T 18-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 SHALO_1779 0ace6cc831806fc75a422ae15d5abcf3 668 Gene3D G3DSA:3.30.1380.10 553 658 1.2E-15 T 18-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 SHALO_1779 0ace6cc831806fc75a422ae15d5abcf3 668 SUPERFAMILY SSF54001 279 379 6.08E-12 T 18-10-2018 IPR038765 Papain-like cysteine peptidase superfamily SHALO_2916 d6da89e381350e92b38ad0f0b5ce14a1 596 Pfam PF00733 Asparagine synthase 229 590 4.0E-86 T 18-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 SHALO_2916 d6da89e381350e92b38ad0f0b5ce14a1 596 PIRSF PIRSF001589 1 595 2.3E-150 T 18-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 SHALO_2916 d6da89e381350e92b38ad0f0b5ce14a1 596 SUPERFAMILY SSF56235 1 213 2.7E-58 T 18-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal SHALO_2916 d6da89e381350e92b38ad0f0b5ce14a1 596 Gene3D G3DSA:3.40.50.620 210 410 6.0E-44 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_2916 d6da89e381350e92b38ad0f0b5ce14a1 596 Gene3D G3DSA:3.40.50.620 446 594 2.5E-27 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_2916 d6da89e381350e92b38ad0f0b5ce14a1 596 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 530 2.2E-138 T 18-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 SHALO_2916 d6da89e381350e92b38ad0f0b5ce14a1 596 Gene3D G3DSA:3.60.20.10 4 176 4.3E-59 T 18-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal SHALO_2916 d6da89e381350e92b38ad0f0b5ce14a1 596 SUPERFAMILY SSF52402 220 582 3.72E-71 T 18-10-2018 SHALO_2916 d6da89e381350e92b38ad0f0b5ce14a1 596 Pfam PF13537 Glutamine amidotransferase domain 43 156 4.5E-40 T 18-10-2018 IPR017932 Glutamine amidotransferase type 2 domain SHALO_0196 181d5bba8bb61cca6f5ee19c7a3d7aa6 798 SUPERFAMILY SSF48452 607 796 9.01E-6 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SHALO_0196 181d5bba8bb61cca6f5ee19c7a3d7aa6 798 Gene3D G3DSA:1.25.40.10 600 797 1.1E-7 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SHALO_0196 181d5bba8bb61cca6f5ee19c7a3d7aa6 798 SUPERFAMILY SSF48452 175 785 2.35E-7 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SHALO_2545 59a192598a898fbcd9e43d31f1dad041 274 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_2545 59a192598a898fbcd9e43d31f1dad041 274 Pfam PF00005 ABC transporter 18 174 3.1E-38 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_2545 59a192598a898fbcd9e43d31f1dad041 274 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 1 243 6.0E-100 T 18-10-2018 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 SHALO_2545 59a192598a898fbcd9e43d31f1dad041 274 SMART SM00382 27 223 4.6E-15 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_2545 59a192598a898fbcd9e43d31f1dad041 274 SUPERFAMILY SSF52540 2 235 8.95E-67 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_2545 59a192598a898fbcd9e43d31f1dad041 274 Gene3D G3DSA:3.40.50.300 1 269 4.9E-73 T 18-10-2018 SHALO_1121 1287275793e785e670446a76aaf7f8ba 135 Gene3D G3DSA:3.30.70.60 1 100 1.7E-27 T 18-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 SHALO_1121 1287275793e785e670446a76aaf7f8ba 135 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 95 19.525 T 18-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 SHALO_1121 1287275793e785e670446a76aaf7f8ba 135 SUPERFAMILY SSF54995 1 96 2.75E-28 T 18-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_1121 1287275793e785e670446a76aaf7f8ba 135 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 94 3.3E-24 T 18-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_1121 1287275793e785e670446a76aaf7f8ba 135 Pfam PF01250 Ribosomal protein S6 3 92 2.4E-24 T 18-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_0816 4f7d0532e85b6804e52c85bd75e89610 279 Pfam PF13509 S1 domain 7 66 1.1E-20 T 18-10-2018 IPR039566 Conserved virulence factor B, S1 domain SHALO_0816 4f7d0532e85b6804e52c85bd75e89610 279 PIRSF PIRSF012524 3 279 1.8E-58 T 18-10-2018 IPR014464 Conserved virulence factor B SHALO_0816 4f7d0532e85b6804e52c85bd75e89610 279 Gene3D G3DSA:1.10.10.10 218 279 3.8E-13 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_0048 c877fc84dd9ee1e2c7e3848629f8c40c 299 SUPERFAMILY SSF103481 204 286 1.1E-10 T 18-10-2018 SHALO_0048 c877fc84dd9ee1e2c7e3848629f8c40c 299 Pfam PF00892 EamA-like transporter family 9 138 5.4E-12 T 18-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 SHALO_0048 c877fc84dd9ee1e2c7e3848629f8c40c 299 Pfam PF00892 EamA-like transporter family 155 285 4.2E-15 T 18-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 SHALO_0048 c877fc84dd9ee1e2c7e3848629f8c40c 299 SUPERFAMILY SSF103481 40 139 1.01E-5 T 18-10-2018 SHALO_1187 e559769cb33e1c81f004fd24c92837f6 181 Pfam PF01327 Polypeptide deformylase 5 159 1.6E-50 T 18-10-2018 IPR023635 Peptide deformylase SHALO_1187 e559769cb33e1c81f004fd24c92837f6 181 Gene3D G3DSA:3.90.45.10 1 177 2.8E-56 T 18-10-2018 IPR036821 Peptide deformylase superfamily SHALO_1187 e559769cb33e1c81f004fd24c92837f6 181 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 6 169 6.3E-42 T 18-10-2018 IPR023635 Peptide deformylase SHALO_1187 e559769cb33e1c81f004fd24c92837f6 181 PIRSF PIRSF004749 1 181 1.3E-49 T 18-10-2018 IPR023635 Peptide deformylase SHALO_1187 e559769cb33e1c81f004fd24c92837f6 181 SUPERFAMILY SSF56420 4 172 3.01E-53 T 18-10-2018 IPR036821 Peptide deformylase superfamily SHALO_1187 e559769cb33e1c81f004fd24c92837f6 181 Hamap MF_00163 Peptide deformylase [def]. 3 172 26.216 T 18-10-2018 IPR023635 Peptide deformylase SHALO_1187 e559769cb33e1c81f004fd24c92837f6 181 PRINTS PR01576 Peptide deformylase signature 111 129 1.1E-28 T 18-10-2018 IPR023635 Peptide deformylase SHALO_1187 e559769cb33e1c81f004fd24c92837f6 181 PRINTS PR01576 Peptide deformylase signature 99 110 1.1E-28 T 18-10-2018 IPR023635 Peptide deformylase SHALO_1187 e559769cb33e1c81f004fd24c92837f6 181 PRINTS PR01576 Peptide deformylase signature 130 159 1.1E-28 T 18-10-2018 IPR023635 Peptide deformylase SHALO_1187 e559769cb33e1c81f004fd24c92837f6 181 PRINTS PR01576 Peptide deformylase signature 35 64 1.1E-28 T 18-10-2018 IPR023635 Peptide deformylase SHALO_1603 2b786fac713c65aecc8448f2e5c50e9f 316 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 134 168 1.1E-9 T 18-10-2018 IPR001451 Hexapeptide repeat SHALO_1603 2b786fac713c65aecc8448f2e5c50e9f 316 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 212 246 1.2E-6 T 18-10-2018 IPR001451 Hexapeptide repeat SHALO_1603 2b786fac713c65aecc8448f2e5c50e9f 316 SUPERFAMILY SSF51161 28 305 2.72E-73 T 18-10-2018 IPR011004 Trimeric LpxA-like superfamily SHALO_1603 2b786fac713c65aecc8448f2e5c50e9f 316 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 119 147 - T 18-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 SHALO_1603 2b786fac713c65aecc8448f2e5c50e9f 316 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 6 314 8.9E-111 T 18-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 SHALO_1603 2b786fac713c65aecc8448f2e5c50e9f 316 Gene3D G3DSA:2.160.10.10 96 295 9.5E-56 T 18-10-2018 SHALO_1603 2b786fac713c65aecc8448f2e5c50e9f 316 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 2 315 32.671 T 18-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 SHALO_1603 2b786fac713c65aecc8448f2e5c50e9f 316 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 18 86 6.0E-19 T 18-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 SHALO_1603 2b786fac713c65aecc8448f2e5c50e9f 316 Gene3D G3DSA:3.40.1390.10 1 95 6.1E-21 T 18-10-2018 SHALO_1441 70a9004dfa94ddaf67b52644ca919bc7 433 Gene3D G3DSA:3.30.830.10 16 239 8.8E-80 T 18-10-2018 SHALO_1441 70a9004dfa94ddaf67b52644ca919bc7 433 Gene3D G3DSA:3.30.830.10 241 433 4.8E-46 T 18-10-2018 SHALO_1441 70a9004dfa94ddaf67b52644ca919bc7 433 SUPERFAMILY SSF63411 19 227 4.33E-58 T 18-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SHALO_1441 70a9004dfa94ddaf67b52644ca919bc7 433 SUPERFAMILY SSF63411 245 429 1.32E-30 T 18-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SHALO_1441 70a9004dfa94ddaf67b52644ca919bc7 433 Pfam PF00675 Insulinase (Peptidase family M16) 39 148 1.7E-22 T 18-10-2018 IPR011765 Peptidase M16, N-terminal SHALO_1441 70a9004dfa94ddaf67b52644ca919bc7 433 Pfam PF05193 Peptidase M16 inactive domain 187 364 7.1E-33 T 18-10-2018 IPR007863 Peptidase M16, C-terminal SHALO_1441 70a9004dfa94ddaf67b52644ca919bc7 433 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 54 77 - T 18-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 SHALO_0596 8f5573e1880540c66461ba5bd281a227 443 Pfam PF03063 Prismane/CO dehydrogenase family 5 87 1.4E-13 T 18-10-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 SHALO_0596 8f5573e1880540c66461ba5bd281a227 443 Gene3D G3DSA:1.20.1270.20 30 114 2.9E-24 T 18-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 SHALO_0596 8f5573e1880540c66461ba5bd281a227 443 Pfam PF03063 Prismane/CO dehydrogenase family 63 423 2.7E-101 T 18-10-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 SHALO_0596 8f5573e1880540c66461ba5bd281a227 443 Gene3D G3DSA:3.40.50.2030 265 438 1.9E-54 T 18-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 SHALO_0596 8f5573e1880540c66461ba5bd281a227 443 Gene3D G3DSA:3.40.50.2030 117 262 3.5E-51 T 18-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 SHALO_0596 8f5573e1880540c66461ba5bd281a227 443 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 37 437 8.6E-149 T 18-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 SHALO_0596 8f5573e1880540c66461ba5bd281a227 443 Hamap MF_00069 Hydroxylamine reductase [hcp]. 5 439 15.27 T 18-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 SHALO_0596 8f5573e1880540c66461ba5bd281a227 443 SUPERFAMILY SSF56821 5 437 2.14E-138 T 18-10-2018 IPR011254 Prismane-like superfamily GO:0003824|GO:0016491|GO:0055114 SHALO_1231 9e2ac7b243dbca86c78c672f4e812e39 357 Gene3D G3DSA:3.30.1330.60 170 348 2.2E-20 T 18-10-2018 IPR036737 OmpA-like domain superfamily SHALO_1231 9e2ac7b243dbca86c78c672f4e812e39 357 SUPERFAMILY SSF103088 212 338 1.27E-19 T 18-10-2018 IPR036737 OmpA-like domain superfamily SHALO_1231 9e2ac7b243dbca86c78c672f4e812e39 357 Pfam PF00691 OmpA family 224 330 2.2E-12 T 18-10-2018 IPR006665 OmpA-like domain SHALO_1898 7cf89d740906b24f6a9d16a9f8a0127e 159 Gene3D G3DSA:3.40.1280.10 1 157 1.1E-55 T 18-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SHALO_1898 7cf89d740906b24f6a9d16a9f8a0127e 159 PIRSF PIRSF029256 1 154 1.0E-56 T 18-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 SHALO_1898 7cf89d740906b24f6a9d16a9f8a0127e 159 SUPERFAMILY SSF75217 1 149 1.05E-36 T 18-10-2018 IPR029028 Alpha/beta knot methyltransferases SHALO_1898 7cf89d740906b24f6a9d16a9f8a0127e 159 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 152 30.32 T 18-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 SHALO_1898 7cf89d740906b24f6a9d16a9f8a0127e 159 Pfam PF00588 SpoU rRNA Methylase family 2 143 1.6E-31 T 18-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 SHALO_2055 5fa37c4695fb5f819eebe7f62e2e9446 802 SUPERFAMILY SSF50692 630 802 8.36E-34 T 18-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily SHALO_2055 5fa37c4695fb5f819eebe7f62e2e9446 802 Gene3D G3DSA:3.40.50.740 40 307 2.7E-80 T 18-10-2018 SHALO_2055 5fa37c4695fb5f819eebe7f62e2e9446 802 Pfam PF00384 Molybdopterin oxidoreductase 107 562 9.6E-74 T 18-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_2055 5fa37c4695fb5f819eebe7f62e2e9446 802 TIGRFAM TIGR02166 dmsA_ynfE: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family 4 802 0.0 T 18-10-2018 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE GO:0009389|GO:0030151|GO:0051539|GO:0055114 SHALO_2055 5fa37c4695fb5f819eebe7f62e2e9446 802 Pfam PF01568 Molydopterin dinucleotide binding domain 688 794 5.3E-19 T 18-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 SHALO_2055 5fa37c4695fb5f819eebe7f62e2e9446 802 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 49 104 5.4E-10 T 18-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_2055 5fa37c4695fb5f819eebe7f62e2e9446 802 Gene3D G3DSA:3.40.50.740 359 615 1.0E-46 T 18-10-2018 SHALO_2055 5fa37c4695fb5f819eebe7f62e2e9446 802 SMART SM00926 45 104 1.8E-4 T 18-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_2055 5fa37c4695fb5f819eebe7f62e2e9446 802 Gene3D G3DSA:2.40.40.20 659 802 6.6E-39 T 18-10-2018 SHALO_2055 5fa37c4695fb5f819eebe7f62e2e9446 802 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 4 32 5.7E-4 T 18-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal SHALO_2055 5fa37c4695fb5f819eebe7f62e2e9446 802 SUPERFAMILY SSF53706 49 685 4.06E-154 T 18-10-2018 SHALO_2716 312b912b85f4c3e71bd0ccfed6a32d27 160 Gene3D G3DSA:2.50.20.10 19 160 2.8E-6 T 18-10-2018 SHALO_1738 72882b79d54b33ffb8dd122230c66e6c 295 ProSitePatterns PS00636 Nt-dnaJ domain signature. 45 64 - T 18-10-2018 IPR018253 DnaJ domain, conserved site SHALO_1738 72882b79d54b33ffb8dd122230c66e6c 295 SUPERFAMILY SSF46565 3 111 1.83E-32 T 18-10-2018 IPR036869 Chaperone J-domain superfamily SHALO_1738 72882b79d54b33ffb8dd122230c66e6c 295 Pfam PF00226 DnaJ domain 5 65 2.8E-26 T 18-10-2018 IPR001623 DnaJ domain SHALO_1738 72882b79d54b33ffb8dd122230c66e6c 295 Gene3D G3DSA:2.60.260.20 131 195 5.0E-14 T 18-10-2018 SHALO_1738 72882b79d54b33ffb8dd122230c66e6c 295 SMART SM00271 3 60 2.1E-28 T 18-10-2018 IPR001623 DnaJ domain SHALO_1738 72882b79d54b33ffb8dd122230c66e6c 295 SUPERFAMILY SSF49493 202 280 5.36E-15 T 18-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 SHALO_1738 72882b79d54b33ffb8dd122230c66e6c 295 Gene3D G3DSA:1.10.287.110 1 110 2.6E-35 T 18-10-2018 IPR036869 Chaperone J-domain superfamily SHALO_1738 72882b79d54b33ffb8dd122230c66e6c 295 SUPERFAMILY SSF49493 132 204 9.29E-10 T 18-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 SHALO_1738 72882b79d54b33ffb8dd122230c66e6c 295 PRINTS PR00625 DnaJ domain signature 60 79 3.5E-27 T 18-10-2018 IPR001623 DnaJ domain SHALO_1738 72882b79d54b33ffb8dd122230c66e6c 295 PRINTS PR00625 DnaJ domain signature 6 24 3.5E-27 T 18-10-2018 IPR001623 DnaJ domain SHALO_1738 72882b79d54b33ffb8dd122230c66e6c 295 PRINTS PR00625 DnaJ domain signature 40 60 3.5E-27 T 18-10-2018 IPR001623 DnaJ domain SHALO_1738 72882b79d54b33ffb8dd122230c66e6c 295 PRINTS PR00625 DnaJ domain signature 24 39 3.5E-27 T 18-10-2018 IPR001623 DnaJ domain SHALO_1738 72882b79d54b33ffb8dd122230c66e6c 295 Pfam PF01556 DnaJ C terminal domain 138 276 5.3E-31 T 18-10-2018 IPR002939 Chaperone DnaJ, C-terminal SHALO_1738 72882b79d54b33ffb8dd122230c66e6c 295 Gene3D G3DSA:2.60.260.20 198 294 1.0E-17 T 18-10-2018 SHALO_2640 763adaf1b52ccc01833c4caa1a125da2 195 Gene3D G3DSA:3.30.110.40 1 85 2.4E-19 T 18-10-2018 IPR036868 TusA-like domain superfamily SHALO_2640 763adaf1b52ccc01833c4caa1a125da2 195 TIGRFAM TIGR03527 selenium_YedF: selenium metabolism protein YedF 3 194 5.4E-56 T 18-10-2018 IPR019870 Selenium metabolism protein YedF SHALO_2640 763adaf1b52ccc01833c4caa1a125da2 195 Pfam PF02635 DsrE/DsrF-like family 129 171 2.9E-5 T 18-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein SHALO_2640 763adaf1b52ccc01833c4caa1a125da2 195 Pfam PF01206 Sulfurtransferase TusA 2 68 6.8E-16 T 18-10-2018 IPR001455 TusA-like domain SHALO_2640 763adaf1b52ccc01833c4caa1a125da2 195 SUPERFAMILY SSF64307 2 70 1.18E-15 T 18-10-2018 IPR036868 TusA-like domain superfamily SHALO_2640 763adaf1b52ccc01833c4caa1a125da2 195 SUPERFAMILY SSF75169 92 176 1.55E-10 T 18-10-2018 IPR027396 DsrEFH-like SHALO_2200 60f27d6397bc7390f69477e8c028c812 780 Pfam PF13181 Tetratricopeptide repeat 274 303 0.018 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_2200 60f27d6397bc7390f69477e8c028c812 780 Pfam PF13181 Tetratricopeptide repeat 461 490 0.018 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_2200 60f27d6397bc7390f69477e8c028c812 780 SUPERFAMILY SSF48452 103 188 1.25E-9 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SHALO_2200 60f27d6397bc7390f69477e8c028c812 780 Gene3D G3DSA:1.25.40.10 238 360 4.2E-6 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SHALO_2200 60f27d6397bc7390f69477e8c028c812 780 SUPERFAMILY SSF48452 274 494 5.18E-16 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SHALO_2200 60f27d6397bc7390f69477e8c028c812 780 SUPERFAMILY SSF48452 439 764 1.69E-9 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SHALO_2200 60f27d6397bc7390f69477e8c028c812 780 Gene3D G3DSA:1.25.40.10 638 767 3.5E-8 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SHALO_2200 60f27d6397bc7390f69477e8c028c812 780 Gene3D G3DSA:1.25.40.10 97 212 7.0E-12 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SHALO_2200 60f27d6397bc7390f69477e8c028c812 780 Gene3D G3DSA:1.25.40.10 422 556 5.3E-7 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SHALO_2200 60f27d6397bc7390f69477e8c028c812 780 Pfam PF13432 Tetratricopeptide repeat 111 167 3.5E-5 T 18-10-2018 SHALO_2200 60f27d6397bc7390f69477e8c028c812 780 SMART SM00028 458 491 2.5E-4 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_2200 60f27d6397bc7390f69477e8c028c812 780 SMART SM00028 271 304 0.18 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_2200 60f27d6397bc7390f69477e8c028c812 780 SMART SM00028 106 139 19.0 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_2200 60f27d6397bc7390f69477e8c028c812 780 SMART SM00028 140 171 4.1 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_2391 d25b4156694f8441db764042e66a065e 376 Gene3D G3DSA:3.50.30.20 4 149 7.5E-46 T 18-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 SHALO_2391 d25b4156694f8441db764042e66a065e 376 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 4 376 41.404 T 18-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 SHALO_2391 d25b4156694f8441db764042e66a065e 376 SUPERFAMILY SSF52317 189 374 1.99E-47 T 18-10-2018 IPR029062 Class I glutamine amidotransferase-like SHALO_2391 d25b4156694f8441db764042e66a065e 376 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 236 250 3.1E-30 T 18-10-2018 SHALO_2391 d25b4156694f8441db764042e66a065e 376 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 193 207 3.1E-30 T 18-10-2018 SHALO_2391 d25b4156694f8441db764042e66a065e 376 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 309 320 3.1E-30 T 18-10-2018 SHALO_2391 d25b4156694f8441db764042e66a065e 376 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 267 283 3.1E-30 T 18-10-2018 SHALO_2391 d25b4156694f8441db764042e66a065e 376 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 284 301 3.1E-30 T 18-10-2018 SHALO_2391 d25b4156694f8441db764042e66a065e 376 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 7 129 6.7E-44 T 18-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 SHALO_2391 d25b4156694f8441db764042e66a065e 376 PRINTS PR00097 Anthranilate synthase component II signature 239 248 1.7E-5 T 18-10-2018 SHALO_2391 d25b4156694f8441db764042e66a065e 376 PRINTS PR00097 Anthranilate synthase component II signature 351 364 1.7E-5 T 18-10-2018 SHALO_2391 d25b4156694f8441db764042e66a065e 376 PRINTS PR00097 Anthranilate synthase component II signature 267 278 1.7E-5 T 18-10-2018 SHALO_2391 d25b4156694f8441db764042e66a065e 376 Pfam PF00117 Glutamine amidotransferase class-I 196 373 2.0E-39 T 18-10-2018 IPR017926 Glutamine amidotransferase SHALO_2391 d25b4156694f8441db764042e66a065e 376 SMART SM01097 4 134 2.8E-68 T 18-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 SHALO_2391 d25b4156694f8441db764042e66a065e 376 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 8 374 3.6E-129 T 18-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 SHALO_2391 d25b4156694f8441db764042e66a065e 376 PRINTS PR00096 Glutamine amidotransferase superfamily signature 239 248 1.2E-10 T 18-10-2018 SHALO_2391 d25b4156694f8441db764042e66a065e 376 PRINTS PR00096 Glutamine amidotransferase superfamily signature 267 278 1.2E-10 T 18-10-2018 SHALO_2391 d25b4156694f8441db764042e66a065e 376 PRINTS PR00096 Glutamine amidotransferase superfamily signature 351 364 1.2E-10 T 18-10-2018 SHALO_2391 d25b4156694f8441db764042e66a065e 376 SUPERFAMILY SSF52021 5 149 1.44E-48 T 18-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 SHALO_2391 d25b4156694f8441db764042e66a065e 376 Gene3D G3DSA:3.40.50.880 152 376 3.2E-57 T 18-10-2018 IPR029062 Class I glutamine amidotransferase-like SHALO_0797 fbd094e9c6a79aafef63b0133c628ca5 118 PRINTS PR00332 Histidine triad family signature 24 42 3.2E-19 T 18-10-2018 IPR001310 Histidine triad (HIT) protein SHALO_0797 fbd094e9c6a79aafef63b0133c628ca5 118 PRINTS PR00332 Histidine triad family signature 3 19 3.2E-19 T 18-10-2018 IPR001310 Histidine triad (HIT) protein SHALO_0797 fbd094e9c6a79aafef63b0133c628ca5 118 PRINTS PR00332 Histidine triad family signature 89 99 3.2E-19 T 18-10-2018 IPR001310 Histidine triad (HIT) protein SHALO_0797 fbd094e9c6a79aafef63b0133c628ca5 118 Pfam PF01230 HIT domain 10 103 6.9E-27 T 18-10-2018 IPR001310 Histidine triad (HIT) protein SHALO_0797 fbd094e9c6a79aafef63b0133c628ca5 118 ProSitePatterns PS00892 HIT domain signature. 82 100 - T 18-10-2018 IPR019808 Histidine triad, conserved site SHALO_0797 fbd094e9c6a79aafef63b0133c628ca5 118 Gene3D G3DSA:3.30.428.10 1 110 1.5E-33 T 18-10-2018 IPR036265 HIT-like superfamily SHALO_0797 fbd094e9c6a79aafef63b0133c628ca5 118 SUPERFAMILY SSF54197 2 106 6.1E-31 T 18-10-2018 IPR036265 HIT-like superfamily SHALO_0571 aca82aae708c4c21ae80c9c89d996217 332 Gene3D G3DSA:3.40.50.720 4 326 8.6E-137 T 18-10-2018 SHALO_0571 aca82aae708c4c21ae80c9c89d996217 332 SUPERFAMILY SSF51735 1 178 3.76E-54 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_0571 aca82aae708c4c21ae80c9c89d996217 332 Gene3D G3DSA:3.30.360.10 150 315 8.6E-137 T 18-10-2018 SHALO_0571 aca82aae708c4c21ae80c9c89d996217 332 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 149 156 - T 18-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_0571 aca82aae708c4c21ae80c9c89d996217 332 SMART SM00846 3 151 5.5E-68 T 18-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_0571 aca82aae708c4c21ae80c9c89d996217 332 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 4 102 1.1E-31 T 18-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_0571 aca82aae708c4c21ae80c9c89d996217 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 145 163 2.0E-33 T 18-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_0571 aca82aae708c4c21ae80c9c89d996217 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 172 188 2.0E-33 T 18-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_0571 aca82aae708c4c21ae80c9c89d996217 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 110 123 2.0E-33 T 18-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_0571 aca82aae708c4c21ae80c9c89d996217 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 2.0E-33 T 18-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_0571 aca82aae708c4c21ae80c9c89d996217 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 2.0E-33 T 18-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_0571 aca82aae708c4c21ae80c9c89d996217 332 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 156 313 3.7E-65 T 18-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_0571 aca82aae708c4c21ae80c9c89d996217 332 PIRSF PIRSF000149 1 332 2.9E-130 T 18-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_0571 aca82aae708c4c21ae80c9c89d996217 332 SUPERFAMILY SSF55347 151 314 1.09E-68 T 18-10-2018 SHALO_0571 aca82aae708c4c21ae80c9c89d996217 332 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 325 5.7E-128 T 18-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_1471 584fd16f31390785ac8cdd800e80d409 409 Gene3D G3DSA:3.90.1260.10 180 408 2.0E-99 T 18-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 SHALO_1471 584fd16f31390785ac8cdd800e80d409 409 TIGRFAM TIGR00032 argG: argininosuccinate synthase 7 397 2.5E-142 T 18-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 SHALO_1471 584fd16f31390785ac8cdd800e80d409 409 SUPERFAMILY SSF69864 177 405 5.1E-94 T 18-10-2018 SHALO_1471 584fd16f31390785ac8cdd800e80d409 409 SUPERFAMILY SSF52402 6 211 2.65E-44 T 18-10-2018 SHALO_1471 584fd16f31390785ac8cdd800e80d409 409 Gene3D G3DSA:3.40.50.620 6 178 4.2E-62 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_1471 584fd16f31390785ac8cdd800e80d409 409 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 11 19 - T 18-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 SHALO_1471 584fd16f31390785ac8cdd800e80d409 409 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 121 132 - T 18-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 SHALO_1471 584fd16f31390785ac8cdd800e80d409 409 Hamap MF_00005 Argininosuccinate synthase [argG]. 5 404 50.358 T 18-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 SHALO_1471 584fd16f31390785ac8cdd800e80d409 409 Pfam PF00764 Arginosuccinate synthase 9 396 1.7E-151 T 18-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 SHALO_1983 3c3cb5624599b0c3f0cc9992705e5323 658 SUPERFAMILY SSF52540 3 417 7.88E-126 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_1983 3c3cb5624599b0c3f0cc9992705e5323 658 Gene3D G3DSA:3.40.50.300 258 416 2.1E-43 T 18-10-2018 SHALO_1983 3c3cb5624599b0c3f0cc9992705e5323 658 Pfam PF12344 Ultra-violet resistance protein B 554 594 5.3E-18 T 18-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain SHALO_1983 3c3cb5624599b0c3f0cc9992705e5323 658 SMART SM00490 462 548 1.1E-18 T 18-10-2018 IPR001650 Helicase, C-terminal SHALO_1983 3c3cb5624599b0c3f0cc9992705e5323 658 SUPERFAMILY SSF46600 612 657 5.1E-11 T 18-10-2018 IPR036876 UVR domain superfamily SHALO_1983 3c3cb5624599b0c3f0cc9992705e5323 658 Hamap MF_00204 UvrABC system protein B [uvrB]. 2 658 41.328 T 18-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 SHALO_1983 3c3cb5624599b0c3f0cc9992705e5323 658 SMART SM00487 8 428 8.0E-25 T 18-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain SHALO_1983 3c3cb5624599b0c3f0cc9992705e5323 658 Pfam PF04851 Type III restriction enzyme, res subunit 15 118 1.8E-11 T 18-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 SHALO_1983 3c3cb5624599b0c3f0cc9992705e5323 658 Pfam PF00271 Helicase conserved C-terminal domain 445 546 5.2E-18 T 18-10-2018 IPR001650 Helicase, C-terminal SHALO_1983 3c3cb5624599b0c3f0cc9992705e5323 658 Pfam PF02151 UvrB/uvrC motif 623 657 2.4E-10 T 18-10-2018 IPR001943 UVR domain GO:0005515 SHALO_1983 3c3cb5624599b0c3f0cc9992705e5323 658 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 3 656 1.9E-299 T 18-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 SHALO_1983 3c3cb5624599b0c3f0cc9992705e5323 658 Gene3D G3DSA:4.10.860.10 608 658 5.1E-9 T 18-10-2018 SHALO_1983 3c3cb5624599b0c3f0cc9992705e5323 658 Gene3D G3DSA:3.40.50.300 1 240 1.4E-70 T 18-10-2018 SHALO_1983 3c3cb5624599b0c3f0cc9992705e5323 658 SUPERFAMILY SSF52540 34 590 1.01E-35 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_1983 3c3cb5624599b0c3f0cc9992705e5323 658 Gene3D G3DSA:3.40.50.300 417 591 9.6E-49 T 18-10-2018 SHALO_1608 6944cd7bc7be23720f3b93b29c489065 511 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 226 239 - T 18-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 SHALO_1608 6944cd7bc7be23720f3b93b29c489065 511 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 288 303 - T 18-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 SHALO_1608 6944cd7bc7be23720f3b93b29c489065 511 Gene3D G3DSA:3.30.450.40 12 184 2.1E-27 T 18-10-2018 IPR029016 GAF-like domain superfamily SHALO_1608 6944cd7bc7be23720f3b93b29c489065 511 SUPERFAMILY SSF46689 412 505 7.17E-8 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SHALO_1608 6944cd7bc7be23720f3b93b29c489065 511 SUPERFAMILY SSF52540 201 440 3.99E-69 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_1608 6944cd7bc7be23720f3b93b29c489065 511 Pfam PF02954 Bacterial regulatory protein, Fis family 463 503 1.7E-10 T 18-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SHALO_1608 6944cd7bc7be23720f3b93b29c489065 511 SUPERFAMILY SSF55781 14 167 4.8E-17 T 18-10-2018 SHALO_1608 6944cd7bc7be23720f3b93b29c489065 511 Gene3D G3DSA:3.40.50.300 187 372 3.9E-67 T 18-10-2018 SHALO_1608 6944cd7bc7be23720f3b93b29c489065 511 Pfam PF13185 GAF domain 35 170 6.0E-8 T 18-10-2018 IPR003018 GAF domain GO:0005515 SHALO_1608 6944cd7bc7be23720f3b93b29c489065 511 Gene3D G3DSA:1.10.8.60 373 437 9.2E-22 T 18-10-2018 SHALO_1608 6944cd7bc7be23720f3b93b29c489065 511 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 414 423 - T 18-10-2018 IPR025944 Sigma-54 interaction domain, conserved site SHALO_1608 6944cd7bc7be23720f3b93b29c489065 511 Pfam PF00158 Sigma-54 interaction domain 202 369 3.6E-72 T 18-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SHALO_1608 6944cd7bc7be23720f3b93b29c489065 511 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 486 506 7.5E-6 T 18-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SHALO_1608 6944cd7bc7be23720f3b93b29c489065 511 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 469 486 7.5E-6 T 18-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SHALO_1608 6944cd7bc7be23720f3b93b29c489065 511 Gene3D G3DSA:1.10.10.60 447 510 8.4E-13 T 18-10-2018 SHALO_1608 6944cd7bc7be23720f3b93b29c489065 511 SMART SM00382 222 365 2.1E-13 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_1902 839a16ea39574492bfcd616de6641554 82 Gene3D G3DSA:1.25.40.10 2 50 8.1E-6 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SHALO_1902 839a16ea39574492bfcd616de6641554 82 SUPERFAMILY SSF48452 5 50 1.14E-5 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SHALO_1118 d4cd3b463f8ef946c00ce2649613aadc 807 SUPERFAMILY SSF88697 10 113 1.39E-19 T 18-10-2018 IPR015947 PUA-like superfamily SHALO_1118 d4cd3b463f8ef946c00ce2649613aadc 807 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 581 665 3.9E-26 T 18-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 SHALO_1118 d4cd3b463f8ef946c00ce2649613aadc 807 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 684 806 3.0E-52 T 18-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 SHALO_1118 d4cd3b463f8ef946c00ce2649613aadc 807 SUPERFAMILY SSF54211 606 804 2.62E-48 T 18-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold SHALO_1118 d4cd3b463f8ef946c00ce2649613aadc 807 TIGRFAM TIGR00763 lon: endopeptidase La 15 805 1.3E-271 T 18-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 SHALO_1118 d4cd3b463f8ef946c00ce2649613aadc 807 Gene3D G3DSA:1.20.58.1480 122 246 1.6E-24 T 18-10-2018 SHALO_1118 d4cd3b463f8ef946c00ce2649613aadc 807 Gene3D G3DSA:3.40.50.300 317 500 9.2E-60 T 18-10-2018 SHALO_1118 d4cd3b463f8ef946c00ce2649613aadc 807 Hamap MF_01973 Lon protease [lon]. 13 806 60.591 T 18-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 SHALO_1118 d4cd3b463f8ef946c00ce2649613aadc 807 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 13 199 2.4E-19 T 18-10-2018 IPR003111 Lon, substrate-binding domain SHALO_1118 d4cd3b463f8ef946c00ce2649613aadc 807 SMART SM00464 12 203 9.7E-33 T 18-10-2018 IPR003111 Lon, substrate-binding domain SHALO_1118 d4cd3b463f8ef946c00ce2649613aadc 807 Gene3D G3DSA:1.10.8.60 502 595 4.2E-29 T 18-10-2018 SHALO_1118 d4cd3b463f8ef946c00ce2649613aadc 807 SUPERFAMILY SSF52540 315 582 2.61E-46 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_1118 d4cd3b463f8ef946c00ce2649613aadc 807 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 362 500 1.6E-22 T 18-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 SHALO_1118 d4cd3b463f8ef946c00ce2649613aadc 807 Gene3D G3DSA:3.30.230.10 596 806 2.1E-74 T 18-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SHALO_1118 d4cd3b463f8ef946c00ce2649613aadc 807 Gene3D G3DSA:2.30.130.40 7 118 5.6E-17 T 18-10-2018 SHALO_1118 d4cd3b463f8ef946c00ce2649613aadc 807 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 759 777 8.8E-50 T 18-10-2018 SHALO_1118 d4cd3b463f8ef946c00ce2649613aadc 807 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 366 385 8.8E-50 T 18-10-2018 SHALO_1118 d4cd3b463f8ef946c00ce2649613aadc 807 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 706 725 8.8E-50 T 18-10-2018 SHALO_1118 d4cd3b463f8ef946c00ce2649613aadc 807 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 606 622 8.8E-50 T 18-10-2018 SHALO_1118 d4cd3b463f8ef946c00ce2649613aadc 807 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 736 755 8.8E-50 T 18-10-2018 SHALO_1118 d4cd3b463f8ef946c00ce2649613aadc 807 SMART SM00382 358 506 5.1E-13 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_1118 d4cd3b463f8ef946c00ce2649613aadc 807 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 709 717 - T 18-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 SHALO_1118 d4cd3b463f8ef946c00ce2649613aadc 807 PIRSF PIRSF001174 1 807 1.3E-298 T 18-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 SHALO_0885 95038dd5ecb27f3760154d5c752971a1 395 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 134 264 3.8E-14 T 18-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 SHALO_0885 95038dd5ecb27f3760154d5c752971a1 395 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 100 1.9E-20 T 18-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 SHALO_0885 95038dd5ecb27f3760154d5c752971a1 395 Gene3D G3DSA:3.90.800.10 68 148 7.1E-39 T 18-10-2018 SHALO_0885 95038dd5ecb27f3760154d5c752971a1 395 SUPERFAMILY SSF52374 2 256 2.38E-48 T 18-10-2018 SHALO_0885 95038dd5ecb27f3760154d5c752971a1 395 SUPERFAMILY SSF48163 239 385 1.83E-13 T 18-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 SHALO_0885 95038dd5ecb27f3760154d5c752971a1 395 Gene3D G3DSA:1.10.1160.10 200 274 6.5E-19 T 18-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 SHALO_0885 95038dd5ecb27f3760154d5c752971a1 395 PRINTS PR00987 Glutamyl-tRNA synthetase signature 3 15 1.7E-6 T 18-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 SHALO_0885 95038dd5ecb27f3760154d5c752971a1 395 PRINTS PR00987 Glutamyl-tRNA synthetase signature 17 28 1.7E-6 T 18-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 SHALO_0885 95038dd5ecb27f3760154d5c752971a1 395 PRINTS PR00987 Glutamyl-tRNA synthetase signature 32 45 1.7E-6 T 18-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 SHALO_0885 95038dd5ecb27f3760154d5c752971a1 395 Gene3D G3DSA:3.40.50.620 3 198 7.1E-39 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_2348 945a3136f2ac74e4ca680c368ad151b3 226 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 6 223 48.799 T 18-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 SHALO_2348 945a3136f2ac74e4ca680c368ad151b3 226 PIRSF PIRSF006293 4 225 1.4E-73 T 18-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 SHALO_2348 945a3136f2ac74e4ca680c368ad151b3 226 SUPERFAMILY SSF52402 7 222 5.95E-58 T 18-10-2018 SHALO_2348 945a3136f2ac74e4ca680c368ad151b3 226 Gene3D G3DSA:3.40.50.620 5 226 4.5E-71 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_2348 945a3136f2ac74e4ca680c368ad151b3 226 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 8 215 3.7E-75 T 18-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 SHALO_2348 945a3136f2ac74e4ca680c368ad151b3 226 Pfam PF06508 Queuosine biosynthesis protein QueC 7 222 1.4E-76 T 18-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 SHALO_2054 3fc8b5c76543f74ede0300e4a5db5850 730 SMART SM00091 374 440 4.5E-5 T 18-10-2018 IPR000014 PAS domain SHALO_2054 3fc8b5c76543f74ede0300e4a5db5850 730 Gene3D G3DSA:3.40.50.2300 144 265 1.9E-7 T 18-10-2018 SHALO_2054 3fc8b5c76543f74ede0300e4a5db5850 730 Pfam PF13426 PAS domain 388 476 4.6E-6 T 18-10-2018 IPR000014 PAS domain SHALO_2054 3fc8b5c76543f74ede0300e4a5db5850 730 Gene3D G3DSA:3.40.50.2300 79 289 1.9E-7 T 18-10-2018 SHALO_2054 3fc8b5c76543f74ede0300e4a5db5850 730 Gene3D G3DSA:1.10.287.130 483 563 1.2E-6 T 18-10-2018 SHALO_2054 3fc8b5c76543f74ede0300e4a5db5850 730 SUPERFAMILY SSF55874 564 719 3.41E-28 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_2054 3fc8b5c76543f74ede0300e4a5db5850 730 Gene3D G3DSA:3.30.565.10 565 723 3.9E-33 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_2054 3fc8b5c76543f74ede0300e4a5db5850 730 SUPERFAMILY SSF55785 359 475 3.43E-15 T 18-10-2018 IPR035965 PAS domain superfamily SHALO_2054 3fc8b5c76543f74ede0300e4a5db5850 730 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 609 719 1.3E-17 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_2054 3fc8b5c76543f74ede0300e4a5db5850 730 Gene3D G3DSA:3.30.450.20 362 482 3.7E-14 T 18-10-2018 SHALO_2054 3fc8b5c76543f74ede0300e4a5db5850 730 SUPERFAMILY SSF47384 489 564 7.46E-5 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SHALO_2054 3fc8b5c76543f74ede0300e4a5db5850 730 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 380 481 2.4E-7 T 18-10-2018 IPR000014 PAS domain SHALO_2054 3fc8b5c76543f74ede0300e4a5db5850 730 SMART SM00387 607 721 7.5E-21 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_2054 3fc8b5c76543f74ede0300e4a5db5850 730 PRINTS PR00344 Bacterial sensor protein C-terminal signature 681 699 1.1E-6 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_2054 3fc8b5c76543f74ede0300e4a5db5850 730 PRINTS PR00344 Bacterial sensor protein C-terminal signature 652 666 1.1E-6 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_2054 3fc8b5c76543f74ede0300e4a5db5850 730 PRINTS PR00344 Bacterial sensor protein C-terminal signature 670 680 1.1E-6 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_1567 542eae7af80ac3f83592edbcc73847fa 393 SMART SM00304 62 116 1.7E-6 T 18-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 SHALO_1567 542eae7af80ac3f83592edbcc73847fa 393 Gene3D G3DSA:1.10.287.950 62 393 1.6E-58 T 18-10-2018 SHALO_1567 542eae7af80ac3f83592edbcc73847fa 393 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 209 311 2.7E-33 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_1567 542eae7af80ac3f83592edbcc73847fa 393 SUPERFAMILY SSF58104 84 393 1.19E-61 T 18-10-2018 SHALO_1567 542eae7af80ac3f83592edbcc73847fa 393 SMART SM00283 131 392 6.8E-43 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_0830 4083cf319f04724c1ef6e65be694d8e1 383 SUPERFAMILY SSF111369 56 298 2.35E-52 T 18-10-2018 SHALO_0830 4083cf319f04724c1ef6e65be694d8e1 383 Gene3D G3DSA:2.40.420.20 305 372 6.9E-85 T 18-10-2018 SHALO_0830 4083cf319f04724c1ef6e65be694d8e1 383 Gene3D G3DSA:1.10.287.470 102 175 6.9E-85 T 18-10-2018 SHALO_0830 4083cf319f04724c1ef6e65be694d8e1 383 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 67 294 9.7E-13 T 18-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SHALO_0830 4083cf319f04724c1ef6e65be694d8e1 383 Gene3D G3DSA:2.40.50.100 67 209 6.9E-85 T 18-10-2018 SHALO_0830 4083cf319f04724c1ef6e65be694d8e1 383 Gene3D G3DSA:2.40.30.170 56 304 6.9E-85 T 18-10-2018 SHALO_0830 4083cf319f04724c1ef6e65be694d8e1 383 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 50 374 5.5E-73 T 18-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 SHALO_2170 0a7465811edc7a849832059a8ec58094 236 Gene3D G3DSA:3.40.50.300 1 234 9.1E-69 T 18-10-2018 SHALO_2170 0a7465811edc7a849832059a8ec58094 236 SUPERFAMILY SSF52540 4 228 2.79E-75 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_2170 0a7465811edc7a849832059a8ec58094 236 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_2170 0a7465811edc7a849832059a8ec58094 236 Pfam PF00005 ABC transporter 24 172 3.5E-29 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_2170 0a7465811edc7a849832059a8ec58094 236 SMART SM00382 33 221 1.7E-13 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_2485 91c1a360f832845bb820803c07064c64 132 Gene3D G3DSA:3.40.30.10 18 131 9.5E-22 T 18-10-2018 SHALO_2485 91c1a360f832845bb820803c07064c64 132 SUPERFAMILY SSF52833 12 130 4.31E-24 T 18-10-2018 IPR036249 Thioredoxin-like superfamily SHALO_2485 91c1a360f832845bb820803c07064c64 132 Pfam PF13899 Thioredoxin-like 25 101 1.6E-12 T 18-10-2018 SHALO_2511 d2c4177acc2bc766e3f3889524a899e7 373 SUPERFAMILY SSF56935 36 373 1.89E-14 T 18-10-2018 SHALO_2511 d2c4177acc2bc766e3f3889524a899e7 373 Pfam PF13609 Gram-negative porin 10 358 6.3E-9 T 18-10-2018 SHALO_2511 d2c4177acc2bc766e3f3889524a899e7 373 Gene3D G3DSA:2.40.160.10 78 373 1.1E-9 T 18-10-2018 IPR023614 Porin domain superfamily SHALO_2429 a9cdb63977225c3bd24a7f07cd2cc617 141 PRINTS PR00060 Ribosomal protein L16 signature 24 36 5.2E-36 T 18-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_2429 a9cdb63977225c3bd24a7f07cd2cc617 141 PRINTS PR00060 Ribosomal protein L16 signature 42 53 5.2E-36 T 18-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_2429 a9cdb63977225c3bd24a7f07cd2cc617 141 PRINTS PR00060 Ribosomal protein L16 signature 88 117 5.2E-36 T 18-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_2429 a9cdb63977225c3bd24a7f07cd2cc617 141 PRINTS PR00060 Ribosomal protein L16 signature 58 87 5.2E-36 T 18-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_2429 a9cdb63977225c3bd24a7f07cd2cc617 141 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 18-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_2429 a9cdb63977225c3bd24a7f07cd2cc617 141 Gene3D G3DSA:3.90.1170.10 1 141 7.7E-54 T 18-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 SHALO_2429 a9cdb63977225c3bd24a7f07cd2cc617 141 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 37.551 T 18-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_2429 a9cdb63977225c3bd24a7f07cd2cc617 141 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 9.6E-49 T 18-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 SHALO_2429 a9cdb63977225c3bd24a7f07cd2cc617 141 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 2.1E-57 T 18-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_2429 a9cdb63977225c3bd24a7f07cd2cc617 141 SUPERFAMILY SSF54686 1 138 2.09E-55 T 18-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 SHALO_1959 de6cbd694e618cfd40b2ed9bf03b3b5e 490 Gene3D G3DSA:3.30.565.10 343 489 3.2E-24 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_1959 de6cbd694e618cfd40b2ed9bf03b3b5e 490 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 388 485 1.7E-10 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_1959 de6cbd694e618cfd40b2ed9bf03b3b5e 490 SUPERFAMILY SSF55874 349 484 9.3E-24 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_1959 de6cbd694e618cfd40b2ed9bf03b3b5e 490 Pfam PF00512 His Kinase A (phospho-acceptor) domain 282 335 3.0E-6 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_1959 de6cbd694e618cfd40b2ed9bf03b3b5e 490 SUPERFAMILY SSF47384 267 340 2.75E-7 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SHALO_1959 de6cbd694e618cfd40b2ed9bf03b3b5e 490 Gene3D G3DSA:1.10.287.130 267 342 3.1E-8 T 18-10-2018 SHALO_1959 de6cbd694e618cfd40b2ed9bf03b3b5e 490 SMART SM00387 386 489 3.9E-14 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_1453 5a4dc723982e70899c61f13abbf3f528 702 SUPERFAMILY SSF53659 374 694 3.33E-97 T 18-10-2018 SHALO_1453 5a4dc723982e70899c61f13abbf3f528 702 PIRSF PIRSF006107 2 699 1.2E-186 T 18-10-2018 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 SHALO_1453 5a4dc723982e70899c61f13abbf3f528 702 Gene3D G3DSA:3.40.50.300 2 205 1.6E-6 T 18-10-2018 SHALO_1453 5a4dc723982e70899c61f13abbf3f528 702 Gene3D G3DSA:3.40.50.10950 381 694 7.3E-142 T 18-10-2018 SHALO_1453 5a4dc723982e70899c61f13abbf3f528 702 Gene3D G3DSA:3.40.50.10750 514 667 7.3E-142 T 18-10-2018 SHALO_1453 5a4dc723982e70899c61f13abbf3f528 702 Pfam PF01515 Phosphate acetyl/butaryl transferase 374 691 2.0E-132 T 18-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 SHALO_1453 5a4dc723982e70899c61f13abbf3f528 702 Pfam PF07085 DRTGG domain 214 328 1.2E-24 T 18-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 SHALO_1453 5a4dc723982e70899c61f13abbf3f528 702 SUPERFAMILY SSF52540 1 212 3.24E-11 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_1453 5a4dc723982e70899c61f13abbf3f528 702 Gene3D G3DSA:3.40.1390.20 206 350 4.9E-25 T 18-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily SHALO_1453 5a4dc723982e70899c61f13abbf3f528 702 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 390 691 1.8E-127 T 18-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 SHALO_1453 5a4dc723982e70899c61f13abbf3f528 702 SUPERFAMILY SSF75138 210 328 1.53E-22 T 18-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily SHALO_1453 5a4dc723982e70899c61f13abbf3f528 702 Pfam PF13500 AAA domain 4 207 7.7E-19 T 18-10-2018 SHALO_2402 23b8ba42c5dfdee6510892d4d5b7629c 286 SUPERFAMILY SSF48576 20 271 9.83E-72 T 18-10-2018 IPR008949 Isoprenoid synthase domain superfamily SHALO_2402 23b8ba42c5dfdee6510892d4d5b7629c 286 Pfam PF00348 Polyprenyl synthetase 26 260 9.8E-50 T 18-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 SHALO_2402 23b8ba42c5dfdee6510892d4d5b7629c 286 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 208 220 - T 18-10-2018 IPR033749 Polyprenyl synthetase, conserved site SHALO_2402 23b8ba42c5dfdee6510892d4d5b7629c 286 Gene3D G3DSA:1.10.600.10 4 286 1.2E-91 T 18-10-2018 IPR008949 Isoprenoid synthase domain superfamily SHALO_2402 23b8ba42c5dfdee6510892d4d5b7629c 286 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 78 94 - T 18-10-2018 IPR033749 Polyprenyl synthetase, conserved site SHALO_0220 40b04f40c79429c0faebc477745529b7 317 Pfam PF16199 Radical_SAM C-terminal domain 229 311 7.7E-18 T 18-10-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 SHALO_0220 40b04f40c79429c0faebc477745529b7 317 SUPERFAMILY SSF102114 9 274 4.19E-44 T 18-10-2018 SHALO_0220 40b04f40c79429c0faebc477745529b7 317 SMART SM00729 21 267 1.2E-34 T 18-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 SHALO_0220 40b04f40c79429c0faebc477745529b7 317 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 7 314 5.1E-89 T 18-10-2018 IPR005911 Protein YhcC-like GO:0051536 SHALO_0220 40b04f40c79429c0faebc477745529b7 317 Gene3D G3DSA:3.80.30.20 78 258 1.7E-15 T 18-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe SHALO_0220 40b04f40c79429c0faebc477745529b7 317 Pfam PF04055 Radical SAM superfamily 41 222 2.4E-10 T 18-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 SHALO_0728 2cdc87f8719e902e1207df484dcb8a57 378 Pfam PF01556 DnaJ C terminal domain 126 337 1.5E-32 T 18-10-2018 IPR002939 Chaperone DnaJ, C-terminal SHALO_0728 2cdc87f8719e902e1207df484dcb8a57 378 Gene3D G3DSA:2.10.230.10 153 212 6.3E-34 T 18-10-2018 SHALO_0728 2cdc87f8719e902e1207df484dcb8a57 378 SUPERFAMILY SSF46565 4 114 2.49E-33 T 18-10-2018 IPR036869 Chaperone J-domain superfamily SHALO_0728 2cdc87f8719e902e1207df484dcb8a57 378 Gene3D G3DSA:2.60.260.20 125 253 6.3E-34 T 18-10-2018 SHALO_0728 2cdc87f8719e902e1207df484dcb8a57 378 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 18-10-2018 IPR018253 DnaJ domain, conserved site SHALO_0728 2cdc87f8719e902e1207df484dcb8a57 378 SMART SM00271 3 61 1.4E-32 T 18-10-2018 IPR001623 DnaJ domain SHALO_0728 2cdc87f8719e902e1207df484dcb8a57 378 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 4 353 1.7E-124 T 18-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 SHALO_0728 2cdc87f8719e902e1207df484dcb8a57 378 Pfam PF00226 DnaJ domain 4 66 1.8E-28 T 18-10-2018 IPR001623 DnaJ domain SHALO_0728 2cdc87f8719e902e1207df484dcb8a57 378 Gene3D G3DSA:1.10.287.110 2 117 4.4E-35 T 18-10-2018 IPR036869 Chaperone J-domain superfamily SHALO_0728 2cdc87f8719e902e1207df484dcb8a57 378 SUPERFAMILY SSF57938 140 213 1.83E-18 T 18-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily SHALO_0728 2cdc87f8719e902e1207df484dcb8a57 378 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 1 376 35.062 T 18-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 SHALO_0728 2cdc87f8719e902e1207df484dcb8a57 378 Gene3D G3DSA:2.60.260.20 258 368 1.1E-18 T 18-10-2018 SHALO_0728 2cdc87f8719e902e1207df484dcb8a57 378 PRINTS PR00625 DnaJ domain signature 24 39 1.2E-28 T 18-10-2018 IPR001623 DnaJ domain SHALO_0728 2cdc87f8719e902e1207df484dcb8a57 378 PRINTS PR00625 DnaJ domain signature 61 80 1.2E-28 T 18-10-2018 IPR001623 DnaJ domain SHALO_0728 2cdc87f8719e902e1207df484dcb8a57 378 PRINTS PR00625 DnaJ domain signature 6 24 1.2E-28 T 18-10-2018 IPR001623 DnaJ domain SHALO_0728 2cdc87f8719e902e1207df484dcb8a57 378 PRINTS PR00625 DnaJ domain signature 41 61 1.2E-28 T 18-10-2018 IPR001623 DnaJ domain SHALO_0728 2cdc87f8719e902e1207df484dcb8a57 378 Pfam PF00684 DnaJ central domain 153 212 3.0E-13 T 18-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 SHALO_0728 2cdc87f8719e902e1207df484dcb8a57 378 SUPERFAMILY SSF49493 125 258 3.27E-15 T 18-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 SHALO_0728 2cdc87f8719e902e1207df484dcb8a57 378 SUPERFAMILY SSF49493 263 348 1.06E-15 T 18-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 SHALO_0257 67155278d6daf32128940afc27b49d4c 355 Pfam PF01842 ACT domain 277 337 3.8E-8 T 18-10-2018 IPR002912 ACT domain SHALO_0257 67155278d6daf32128940afc27b49d4c 355 Pfam PF01817 Chorismate mutase type II 8 84 1.3E-23 T 18-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 SHALO_0257 67155278d6daf32128940afc27b49d4c 355 Gene3D G3DSA:1.20.59.10 1 87 1.1E-25 T 18-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 SHALO_0257 67155278d6daf32128940afc27b49d4c 355 Pfam PF00800 Prephenate dehydratase 89 264 4.2E-59 T 18-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 SHALO_0257 67155278d6daf32128940afc27b49d4c 355 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 302 309 - T 18-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 SHALO_0257 67155278d6daf32128940afc27b49d4c 355 SUPERFAMILY SSF53850 88 265 4.88E-54 T 18-10-2018 SHALO_0257 67155278d6daf32128940afc27b49d4c 355 Gene3D G3DSA:3.40.190.10 169 253 7.5E-53 T 18-10-2018 SHALO_0257 67155278d6daf32128940afc27b49d4c 355 PIRSF PIRSF001500 1 354 1.7E-120 T 18-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 SHALO_0257 67155278d6daf32128940afc27b49d4c 355 SUPERFAMILY SSF55021 259 351 1.73E-20 T 18-10-2018 SHALO_0257 67155278d6daf32128940afc27b49d4c 355 SMART SM00830 8 87 1.8E-26 T 18-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 SHALO_0257 67155278d6daf32128940afc27b49d4c 355 TIGRFAM TIGR01807 CM_P2: chorismate mutase 6 77 1.8E-24 T 18-10-2018 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 SHALO_0257 67155278d6daf32128940afc27b49d4c 355 SUPERFAMILY SSF48600 4 86 2.14E-20 T 18-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 SHALO_0257 67155278d6daf32128940afc27b49d4c 355 Gene3D G3DSA:3.40.190.10 91 262 7.5E-53 T 18-10-2018 SHALO_0257 67155278d6daf32128940afc27b49d4c 355 Gene3D G3DSA:3.30.70.260 268 353 7.9E-25 T 18-10-2018 SHALO_0381 ba1ccc41dd350de4dc1fa67dcd1fabe5 239 Gene3D G3DSA:1.10.1740.10 8 95 9.3E-21 T 18-10-2018 SHALO_0381 ba1ccc41dd350de4dc1fa67dcd1fabe5 239 SUPERFAMILY SSF88946 21 96 1.26E-15 T 18-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 SHALO_0381 ba1ccc41dd350de4dc1fa67dcd1fabe5 239 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 25 234 2.5E-59 T 18-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SHALO_0381 ba1ccc41dd350de4dc1fa67dcd1fabe5 239 Gene3D G3DSA:1.20.140.160 96 236 6.8E-26 T 18-10-2018 SHALO_0381 ba1ccc41dd350de4dc1fa67dcd1fabe5 239 PRINTS PR00046 Major sigma-70 factor signature 204 219 3.3E-6 T 18-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 SHALO_0381 ba1ccc41dd350de4dc1fa67dcd1fabe5 239 PRINTS PR00046 Major sigma-70 factor signature 219 230 3.3E-6 T 18-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 SHALO_0381 ba1ccc41dd350de4dc1fa67dcd1fabe5 239 PRINTS PR00046 Major sigma-70 factor signature 96 109 3.3E-6 T 18-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 SHALO_0381 ba1ccc41dd350de4dc1fa67dcd1fabe5 239 PRINTS PR00046 Major sigma-70 factor signature 187 199 3.3E-6 T 18-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 SHALO_0381 ba1ccc41dd350de4dc1fa67dcd1fabe5 239 SUPERFAMILY SSF88659 165 234 2.24E-17 T 18-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like SHALO_0381 ba1ccc41dd350de4dc1fa67dcd1fabe5 239 Pfam PF04542 Sigma-70 region 2 25 95 1.9E-9 T 18-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 SHALO_0381 ba1ccc41dd350de4dc1fa67dcd1fabe5 239 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 234 3.3E-29 T 18-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 SHALO_0381 ba1ccc41dd350de4dc1fa67dcd1fabe5 239 Pfam PF04545 Sigma-70, region 4 185 232 4.1E-16 T 18-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 SHALO_0381 ba1ccc41dd350de4dc1fa67dcd1fabe5 239 SUPERFAMILY SSF88659 99 159 3.92E-6 T 18-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like SHALO_0381 ba1ccc41dd350de4dc1fa67dcd1fabe5 239 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 204 230 - T 18-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 SHALO_2323 3dbc72ab0b6e19858b8be8c4ec68b6fd 212 Gene3D G3DSA:3.40.50.1000 4 186 6.7E-48 T 18-10-2018 IPR023214 HAD superfamily SHALO_2323 3dbc72ab0b6e19858b8be8c4ec68b6fd 212 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 92 174 3.7E-6 T 18-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 SHALO_2323 3dbc72ab0b6e19858b8be8c4ec68b6fd 212 Gene3D G3DSA:1.10.150.240 16 80 6.7E-48 T 18-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 SHALO_2323 3dbc72ab0b6e19858b8be8c4ec68b6fd 212 SUPERFAMILY SSF56784 1 207 9.87E-49 T 18-10-2018 IPR036412 HAD-like superfamily SHALO_2323 3dbc72ab0b6e19858b8be8c4ec68b6fd 212 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 62 180 5.1E-8 T 18-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 SHALO_2323 3dbc72ab0b6e19858b8be8c4ec68b6fd 212 Pfam PF13419 Haloacid dehalogenase-like hydrolase 4 180 2.6E-39 T 18-10-2018 SHALO_2955 fdf58927f0bace7ddfedf555d489cca9 133 SUPERFAMILY SSF110857 1 105 6.93E-18 T 18-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily SHALO_2955 fdf58927f0bace7ddfedf555d489cca9 133 Gene3D G3DSA:3.10.490.10 1 103 3.7E-23 T 18-10-2018 SHALO_2955 fdf58927f0bace7ddfedf555d489cca9 133 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 4 113 6.0E-18 T 18-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like SHALO_0377 d34df2f82f666e5f0e7752d5f000d2f8 155 Gene3D G3DSA:3.30.70.560 20 154 6.2E-39 T 18-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 SHALO_0377 d34df2f82f666e5f0e7752d5f000d2f8 155 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 107 118 - T 18-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 SHALO_0377 d34df2f82f666e5f0e7752d5f000d2f8 155 SUPERFAMILY SSF55083 21 150 7.85E-39 T 18-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 SHALO_0377 d34df2f82f666e5f0e7752d5f000d2f8 155 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 23 150 8.3E-37 T 18-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 SHALO_0377 d34df2f82f666e5f0e7752d5f000d2f8 155 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 24 150 4.1E-25 T 18-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 SHALO_1304 26126616fe926855f0ed32a00806f38e 708 Pfam PF13183 4Fe-4S dicluster domain 301 368 9.6E-8 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_1304 26126616fe926855f0ed32a00806f38e 708 SUPERFAMILY SSF100950 57 285 1.88E-37 T 18-10-2018 IPR037171 NagB/RpiA transferase-like SHALO_1304 26126616fe926855f0ed32a00806f38e 708 SUPERFAMILY SSF46548 273 382 2.62E-14 T 18-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 SHALO_1304 26126616fe926855f0ed32a00806f38e 708 Pfam PF02589 LUD domain 63 284 1.2E-55 T 18-10-2018 IPR003741 LUD domain SHALO_1304 26126616fe926855f0ed32a00806f38e 708 Gene3D G3DSA:1.10.1060.10 293 382 2.0E-6 T 18-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 SHALO_1304 26126616fe926855f0ed32a00806f38e 708 Gene3D G3DSA:3.40.50.10420 127 274 2.5E-15 T 18-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily SHALO_1304 26126616fe926855f0ed32a00806f38e 708 Pfam PF02754 Cysteine-rich domain 601 684 9.3E-16 T 18-10-2018 IPR004017 Cysteine-rich domain SHALO_1304 26126616fe926855f0ed32a00806f38e 708 Pfam PF02754 Cysteine-rich domain 465 547 5.1E-15 T 18-10-2018 IPR004017 Cysteine-rich domain SHALO_1304 26126616fe926855f0ed32a00806f38e 708 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 304 315 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_2639 66362bc0822835ef62aee583ac2aa7b4 343 Pfam PF02769 AIR synthase related protein, C-terminal domain 167 338 1.3E-26 T 18-10-2018 IPR010918 PurM-like, C-terminal domain SHALO_2639 66362bc0822835ef62aee583ac2aa7b4 343 Hamap MF_00625 Selenide, water dikinase [selD]. 4 343 39.015 T 18-10-2018 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 SHALO_2639 66362bc0822835ef62aee583ac2aa7b4 343 SUPERFAMILY SSF55326 7 159 1.79E-34 T 18-10-2018 IPR036921 PurM-like, N-terminal domain superfamily SHALO_2639 66362bc0822835ef62aee583ac2aa7b4 343 PIRSF PIRSF036407 1 343 1.8E-114 T 18-10-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 SHALO_2639 66362bc0822835ef62aee583ac2aa7b4 343 Gene3D G3DSA:3.30.1330.10 1 160 8.9E-39 T 18-10-2018 IPR036921 PurM-like, N-terminal domain superfamily SHALO_2639 66362bc0822835ef62aee583ac2aa7b4 343 SUPERFAMILY SSF56042 161 329 2.09E-44 T 18-10-2018 IPR036676 PurM-like, C-terminal domain superfamily SHALO_2639 66362bc0822835ef62aee583ac2aa7b4 343 Pfam PF00586 AIR synthase related protein, N-terminal domain 47 154 5.0E-13 T 18-10-2018 IPR016188 PurM-like, N-terminal domain SHALO_2639 66362bc0822835ef62aee583ac2aa7b4 343 TIGRFAM TIGR00476 selD: selenide, water dikinase 6 310 2.2E-109 T 18-10-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 SHALO_2639 66362bc0822835ef62aee583ac2aa7b4 343 Gene3D G3DSA:3.90.650.10 161 341 2.5E-51 T 18-10-2018 IPR036676 PurM-like, C-terminal domain superfamily SHALO_2928 7673f717e5a22df432f0a756cb360021 487 PRINTS PR00207 Flagellin signature 111 134 1.5E-19 T 18-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 SHALO_2928 7673f717e5a22df432f0a756cb360021 487 PRINTS PR00207 Flagellin signature 76 95 1.5E-19 T 18-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 SHALO_2928 7673f717e5a22df432f0a756cb360021 487 PRINTS PR00207 Flagellin signature 37 54 1.5E-19 T 18-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 SHALO_2928 7673f717e5a22df432f0a756cb360021 487 Gene3D G3DSA:1.20.58.1830 5 486 1.4E-105 T 18-10-2018 SHALO_2928 7673f717e5a22df432f0a756cb360021 487 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 143 1.8E-43 T 18-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SHALO_2928 7673f717e5a22df432f0a756cb360021 487 Pfam PF07196 Flagellin hook IN motif 187 246 1.8E-8 T 18-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 SHALO_2928 7673f717e5a22df432f0a756cb360021 487 Pfam PF07196 Flagellin hook IN motif 250 302 1.4E-11 T 18-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 SHALO_2928 7673f717e5a22df432f0a756cb360021 487 Gene3D G3DSA:2.30.220.10 191 270 1.4E-105 T 18-10-2018 SHALO_2928 7673f717e5a22df432f0a756cb360021 487 Pfam PF00700 Bacterial flagellin C-terminal helical region 402 486 4.1E-23 T 18-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SHALO_2928 7673f717e5a22df432f0a756cb360021 487 SUPERFAMILY SSF64518 1 487 1.01E-99 T 18-10-2018 SHALO_2928 7673f717e5a22df432f0a756cb360021 487 Gene3D G3DSA:1.20.1330.10 45 446 1.4E-105 T 18-10-2018 SHALO_2928 7673f717e5a22df432f0a756cb360021 487 Gene3D G3DSA:2.170.280.10 178 394 1.4E-105 T 18-10-2018 SHALO_0515 5e7deebed98f8bb0868f7318952f24a7 365 Gene3D G3DSA:2.40.440.10 110 240 2.8E-5 T 18-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like SHALO_0515 5e7deebed98f8bb0868f7318952f24a7 365 Pfam PF03734 L,D-transpeptidase catalytic domain 135 239 1.7E-9 T 18-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 SHALO_0515 5e7deebed98f8bb0868f7318952f24a7 365 SUPERFAMILY SSF141523 133 240 1.14E-10 T 18-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like SHALO_2471 fe91359ec567fe0bd9eb14b2a8ddc91e 172 Pfam PF00226 DnaJ domain 105 169 4.7E-11 T 18-10-2018 IPR001623 DnaJ domain SHALO_2471 fe91359ec567fe0bd9eb14b2a8ddc91e 172 PRINTS PR00625 DnaJ domain signature 125 140 2.0E-6 T 18-10-2018 IPR001623 DnaJ domain SHALO_2471 fe91359ec567fe0bd9eb14b2a8ddc91e 172 PRINTS PR00625 DnaJ domain signature 147 167 2.0E-6 T 18-10-2018 IPR001623 DnaJ domain SHALO_2471 fe91359ec567fe0bd9eb14b2a8ddc91e 172 PRINTS PR00625 DnaJ domain signature 107 125 2.0E-6 T 18-10-2018 IPR001623 DnaJ domain SHALO_2471 fe91359ec567fe0bd9eb14b2a8ddc91e 172 Gene3D G3DSA:1.10.287.110 99 170 1.3E-12 T 18-10-2018 IPR036869 Chaperone J-domain superfamily SHALO_2471 fe91359ec567fe0bd9eb14b2a8ddc91e 172 SUPERFAMILY SSF46565 101 169 2.09E-13 T 18-10-2018 IPR036869 Chaperone J-domain superfamily SHALO_2471 fe91359ec567fe0bd9eb14b2a8ddc91e 172 SMART SM00271 104 167 1.0E-8 T 18-10-2018 IPR001623 DnaJ domain SHALO_0076 86a02f27e6737e4fd2e8221cfdb7756a 951 Pfam PF08751 TrwC relaxase 11 285 9.4E-87 T 18-10-2018 IPR014862 TrwC relaxase SHALO_0076 86a02f27e6737e4fd2e8221cfdb7756a 951 TIGRFAM TIGR02686 relax_trwC: conjugative relaxase domain 12 285 1.7E-71 T 18-10-2018 IPR014059 Conjugative relaxase, N-terminal SHALO_0076 86a02f27e6737e4fd2e8221cfdb7756a 951 SUPERFAMILY SSF52540 525 834 9.82E-28 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0076 86a02f27e6737e4fd2e8221cfdb7756a 951 Gene3D G3DSA:3.40.50.300 636 845 6.3E-10 T 18-10-2018 SHALO_0076 86a02f27e6737e4fd2e8221cfdb7756a 951 Pfam PF13604 AAA domain 414 601 2.1E-45 T 18-10-2018 SHALO_0076 86a02f27e6737e4fd2e8221cfdb7756a 951 Gene3D G3DSA:3.40.50.300 379 583 2.1E-35 T 18-10-2018 SHALO_0076 86a02f27e6737e4fd2e8221cfdb7756a 951 SUPERFAMILY SSF55464 8 286 1.19E-76 T 18-10-2018 SHALO_0076 86a02f27e6737e4fd2e8221cfdb7756a 951 SUPERFAMILY SSF52540 410 553 1.78E-21 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_2452 290c802abf614fb34bf5b56a78077672 227 SUPERFAMILY SSF54768 110 223 1.19E-23 T 18-10-2018 SHALO_2452 290c802abf614fb34bf5b56a78077672 227 SUPERFAMILY SSF69065 2 153 2.79E-46 T 18-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 SHALO_2452 290c802abf614fb34bf5b56a78077672 227 ProSitePatterns PS00517 Ribonuclease III family signature. 38 46 - T 18-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 SHALO_2452 290c802abf614fb34bf5b56a78077672 227 SMART SM00535 20 149 1.2E-47 T 18-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 SHALO_2452 290c802abf614fb34bf5b56a78077672 227 Gene3D G3DSA:3.30.160.20 155 221 1.2E-20 T 18-10-2018 SHALO_2452 290c802abf614fb34bf5b56a78077672 227 Hamap MF_00104 Ribonuclease 3 [rnc]. 8 219 29.155 T 18-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 SHALO_2452 290c802abf614fb34bf5b56a78077672 227 SMART SM00358 156 223 7.7E-18 T 18-10-2018 IPR014720 Double-stranded RNA-binding domain SHALO_2452 290c802abf614fb34bf5b56a78077672 227 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 8 220 9.2E-71 T 18-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 SHALO_2452 290c802abf614fb34bf5b56a78077672 227 Gene3D G3DSA:1.10.1520.10 4 147 7.0E-45 T 18-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 SHALO_2452 290c802abf614fb34bf5b56a78077672 227 Pfam PF14622 Ribonuclease-III-like 18 136 8.3E-32 T 18-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 SHALO_2452 290c802abf614fb34bf5b56a78077672 227 Pfam PF00035 Double-stranded RNA binding motif 157 222 3.5E-15 T 18-10-2018 IPR014720 Double-stranded RNA-binding domain SHALO_0107 6a84e43fe839b9f111709ae601438477 321 Pfam PF00571 CBS domain 198 254 1.9E-7 T 18-10-2018 IPR000644 CBS domain SHALO_0107 6a84e43fe839b9f111709ae601438477 321 SMART SM00116 206 254 0.0043 T 18-10-2018 IPR000644 CBS domain SHALO_0107 6a84e43fe839b9f111709ae601438477 321 PIRSF PIRSF004692 1 321 1.8E-122 T 18-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 SHALO_0107 6a84e43fe839b9f111709ae601438477 321 Pfam PF01380 SIS domain 38 168 8.0E-24 T 18-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 SHALO_0107 6a84e43fe839b9f111709ae601438477 321 Gene3D G3DSA:3.10.580.10 193 318 8.4E-31 T 18-10-2018 SHALO_0107 6a84e43fe839b9f111709ae601438477 321 Gene3D G3DSA:3.40.50.10490 2 192 1.9E-59 T 18-10-2018 SHALO_0107 6a84e43fe839b9f111709ae601438477 321 SUPERFAMILY SSF53697 5 274 1.29E-58 T 18-10-2018 SHALO_0107 6a84e43fe839b9f111709ae601438477 321 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 42 311 5.2E-104 T 18-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 SHALO_2369 21150050f55f65b31efea41950d2d33c 629 SMART SM00304 297 351 4.8E-9 T 18-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 SHALO_2369 21150050f55f65b31efea41950d2d33c 629 SMART SM00283 362 627 6.6E-30 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_2369 21150050f55f65b31efea41950d2d33c 629 SUPERFAMILY SSF58104 319 628 7.46E-58 T 18-10-2018 SHALO_2369 21150050f55f65b31efea41950d2d33c 629 Gene3D G3DSA:1.10.287.950 299 629 4.7E-58 T 18-10-2018 SHALO_2369 21150050f55f65b31efea41950d2d33c 629 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 426 555 4.0E-33 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_2369 21150050f55f65b31efea41950d2d33c 629 Pfam PF00672 HAMP domain 301 348 2.4E-7 T 18-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 SHALO_2369 21150050f55f65b31efea41950d2d33c 629 Pfam PF02743 Cache domain 33 259 6.6E-18 T 18-10-2018 IPR033479 Double Cache domain 1 SHALO_2369 21150050f55f65b31efea41950d2d33c 629 Gene3D G3DSA:3.30.450.20 62 171 1.2E-15 T 18-10-2018 SHALO_2369 21150050f55f65b31efea41950d2d33c 629 Gene3D G3DSA:3.30.450.20 49 270 1.2E-15 T 18-10-2018 SHALO_0613 08d7aed9c278d63bfb4a8cc181c4d73b 512 Pfam PF07690 Major Facilitator Superfamily 25 417 2.0E-57 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SHALO_0613 08d7aed9c278d63bfb4a8cc181c4d73b 512 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 18 496 2.2E-133 T 18-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 SHALO_0613 08d7aed9c278d63bfb4a8cc181c4d73b 512 Gene3D G3DSA:1.20.1720.10 21 225 1.4E-43 T 18-10-2018 SHALO_0613 08d7aed9c278d63bfb4a8cc181c4d73b 512 PRINTS PR01036 Tetracycline resistance protein TetB signature 210 228 2.7E-6 T 18-10-2018 SHALO_0613 08d7aed9c278d63bfb4a8cc181c4d73b 512 PRINTS PR01036 Tetracycline resistance protein TetB signature 23 47 2.7E-6 T 18-10-2018 SHALO_0613 08d7aed9c278d63bfb4a8cc181c4d73b 512 PRINTS PR01036 Tetracycline resistance protein TetB signature 144 168 2.7E-6 T 18-10-2018 SHALO_0613 08d7aed9c278d63bfb4a8cc181c4d73b 512 SUPERFAMILY SSF103473 10 503 1.44E-67 T 18-10-2018 IPR036259 MFS transporter superfamily SHALO_2893 59004f000d7a178da086c7b097aeedf0 453 Gene3D G3DSA:3.40.50.720 209 378 3.8E-157 T 18-10-2018 SHALO_2893 59004f000d7a178da086c7b097aeedf0 453 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 202 451 1.0E-74 T 18-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 SHALO_2893 59004f000d7a178da086c7b097aeedf0 453 Gene3D G3DSA:1.10.285.10 7 389 3.8E-157 T 18-10-2018 SHALO_2893 59004f000d7a178da086c7b097aeedf0 453 PIRSF PIRSF000185 22 453 1.8E-104 T 18-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 SHALO_2893 59004f000d7a178da086c7b097aeedf0 453 Gene3D G3DSA:1.10.285.10 398 453 2.5E-7 T 18-10-2018 SHALO_2893 59004f000d7a178da086c7b097aeedf0 453 SMART SM00839 204 451 7.0E-68 T 18-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 SHALO_2893 59004f000d7a178da086c7b097aeedf0 453 Gene3D G3DSA:3.40.50.10860 55 190 3.8E-157 T 18-10-2018 SHALO_2893 59004f000d7a178da086c7b097aeedf0 453 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 235 255 3.3E-28 T 18-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 SHALO_2893 59004f000d7a178da086c7b097aeedf0 453 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 193 215 3.3E-28 T 18-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 SHALO_2893 59004f000d7a178da086c7b097aeedf0 453 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 377 388 3.3E-28 T 18-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 SHALO_2893 59004f000d7a178da086c7b097aeedf0 453 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 114 128 3.3E-28 T 18-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 SHALO_2893 59004f000d7a178da086c7b097aeedf0 453 SUPERFAMILY SSF53223 7 196 4.16E-71 T 18-10-2018 SHALO_2893 59004f000d7a178da086c7b097aeedf0 453 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 57 185 3.2E-48 T 18-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 SHALO_2893 59004f000d7a178da086c7b097aeedf0 453 SUPERFAMILY SSF51735 202 451 1.79E-64 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_2893 59004f000d7a178da086c7b097aeedf0 453 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 122 135 - T 18-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 SHALO_2699 4facd89d7741cb793b2e87d31b1ff560 235 PIRSF PIRSF006232 2 233 8.9E-48 T 18-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 SHALO_2699 4facd89d7741cb793b2e87d31b1ff560 235 Gene3D G3DSA:2.60.120.10 8 233 9.9E-81 T 18-10-2018 IPR014710 RmlC-like jelly roll fold SHALO_2699 4facd89d7741cb793b2e87d31b1ff560 235 SUPERFAMILY SSF51182 4 232 4.02E-66 T 18-10-2018 IPR011051 RmlC-like cupin domain superfamily SHALO_2699 4facd89d7741cb793b2e87d31b1ff560 235 Pfam PF02678 Pirin 11 119 2.0E-30 T 18-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 SHALO_2699 4facd89d7741cb793b2e87d31b1ff560 235 Gene3D G3DSA:2.60.120.10 12 135 9.9E-81 T 18-10-2018 IPR014710 RmlC-like jelly roll fold SHALO_0061 0c6f5b2fc52fed8a0e2d4b0f45e1ba20 244 Gene3D G3DSA:1.10.3290.10 41 243 1.4E-45 T 18-10-2018 IPR036597 Fido-like domain superfamily SHALO_0061 0c6f5b2fc52fed8a0e2d4b0f45e1ba20 244 SUPERFAMILY SSF140931 79 234 5.62E-27 T 18-10-2018 IPR036597 Fido-like domain superfamily SHALO_0061 0c6f5b2fc52fed8a0e2d4b0f45e1ba20 244 Pfam PF02661 Fic/DOC family 91 193 7.1E-14 T 18-10-2018 IPR003812 Fido domain SHALO_2287 edf8db18ff5f2a0bfc12f26445757171 288 SUPERFAMILY SSF51735 3 283 1.56E-95 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_2287 edf8db18ff5f2a0bfc12f26445757171 288 Pfam PF04321 RmlD substrate binding domain 3 283 1.8E-100 T 18-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 SHALO_2287 edf8db18ff5f2a0bfc12f26445757171 288 Gene3D G3DSA:3.90.25.10 161 277 4.1E-106 T 18-10-2018 SHALO_2287 edf8db18ff5f2a0bfc12f26445757171 288 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 4 283 6.1E-95 T 18-10-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 SHALO_2287 edf8db18ff5f2a0bfc12f26445757171 288 Gene3D G3DSA:3.40.50.720 4 271 4.1E-106 T 18-10-2018 SHALO_2022 25d1147e931644e3d1d5b0a0b400ce85 224 Gene3D G3DSA:3.40.50.300 4 217 4.3E-53 T 18-10-2018 SHALO_2022 25d1147e931644e3d1d5b0a0b400ce85 224 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 7 169 6.9E-36 T 18-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 SHALO_2022 25d1147e931644e3d1d5b0a0b400ce85 224 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 3 203 21.638 T 18-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 SHALO_2022 25d1147e931644e3d1d5b0a0b400ce85 224 SUPERFAMILY SSF52540 1 198 1.49E-35 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_2022 25d1147e931644e3d1d5b0a0b400ce85 224 Pfam PF13500 AAA domain 6 165 3.3E-30 T 18-10-2018 SHALO_2361 418b278f32b879f7f1d45c3a211862a0 258 PIRSF PIRSF006157 1 258 4.3E-81 T 18-10-2018 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type GO:0008270|GO:0016701|GO:0055114 SHALO_2361 418b278f32b879f7f1d45c3a211862a0 258 SUPERFAMILY SSF53213 6 256 1.7E-76 T 18-10-2018 SHALO_2361 418b278f32b879f7f1d45c3a211862a0 258 Gene3D G3DSA:3.40.830.10 1 258 5.8E-79 T 18-10-2018 SHALO_2361 418b278f32b879f7f1d45c3a211862a0 258 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 23 242 9.6E-34 T 18-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 SHALO_2233 6872186c7ab913f45692994d802fe4e7 272 SUPERFAMILY SSF50249 165 269 2.4E-28 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold SHALO_2233 6872186c7ab913f45692994d802fe4e7 272 Pfam PF01068 ATP dependent DNA ligase domain 37 190 2.3E-9 T 18-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 SHALO_2233 6872186c7ab913f45692994d802fe4e7 272 Gene3D G3DSA:2.40.50.140 190 272 3.3E-10 T 18-10-2018 SHALO_2233 6872186c7ab913f45692994d802fe4e7 272 Gene3D G3DSA:3.30.1490.70 30 182 2.7E-48 T 18-10-2018 SHALO_2233 6872186c7ab913f45692994d802fe4e7 272 Gene3D G3DSA:3.30.470.30 44 142 2.7E-48 T 18-10-2018 SHALO_2233 6872186c7ab913f45692994d802fe4e7 272 Pfam PF14743 DNA ligase OB-like domain 204 268 5.0E-26 T 18-10-2018 IPR029319 DNA ligase, OB-like domain SHALO_2233 6872186c7ab913f45692994d802fe4e7 272 SUPERFAMILY SSF56091 30 190 2.47E-35 T 18-10-2018 SHALO_2146 8b6e34ec314dfaacf4600dc2e8f69c19 261 Gene3D G3DSA:3.40.50.720 47 261 2.3E-51 T 18-10-2018 SHALO_2146 8b6e34ec314dfaacf4600dc2e8f69c19 261 SUPERFAMILY SSF69572 48 248 9.42E-57 T 18-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 SHALO_2146 8b6e34ec314dfaacf4600dc2e8f69c19 261 Pfam PF00899 ThiF family 50 250 2.5E-41 T 18-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 SHALO_3008 bcdc2c0e3f688d93a870a55bf2954829 202 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 202 24.893 T 18-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 SHALO_3008 bcdc2c0e3f688d93a870a55bf2954829 202 TIGRFAM TIGR01367 pyrE_Therm: orotate phosphoribosyltransferase 3 200 1.7E-77 T 18-10-2018 IPR006273 Orotate phosphoribosyltransferase, bacterial GO:0004588|GO:0019856 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 SHALO_3008 bcdc2c0e3f688d93a870a55bf2954829 202 SUPERFAMILY SSF53271 6 150 2.35E-38 T 18-10-2018 IPR029057 Phosphoribosyltransferase-like SHALO_3008 bcdc2c0e3f688d93a870a55bf2954829 202 Pfam PF00156 Phosphoribosyl transferase domain 40 146 1.2E-9 T 18-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 SHALO_3008 bcdc2c0e3f688d93a870a55bf2954829 202 Gene3D G3DSA:3.40.50.2020 1 202 4.1E-61 T 18-10-2018 SHALO_2093 df036d0305813be0f29c1bf5b47b0552 295 Gene3D G3DSA:3.20.20.60 1 290 5.7E-92 T 18-10-2018 SHALO_2093 df036d0305813be0f29c1bf5b47b0552 295 PIRSF PIRSF015582 1 295 3.0E-77 T 18-10-2018 IPR011206 Citrate lyase beta subunit-like SHALO_2093 df036d0305813be0f29c1bf5b47b0552 295 SUPERFAMILY SSF51621 4 235 2.3E-59 T 18-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 SHALO_2093 df036d0305813be0f29c1bf5b47b0552 295 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 7 225 6.1E-73 T 18-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 SHALO_1806 1140d945994cc647a702a1f73ec78e6f 145 Pfam PF02600 Disulfide bond formation protein DsbB 14 138 3.0E-10 T 18-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 SHALO_1806 1140d945994cc647a702a1f73ec78e6f 145 Gene3D G3DSA:1.20.1550.10 1 119 8.5E-11 T 18-10-2018 IPR023380 DsbB-like superfamily SHALO_1806 1140d945994cc647a702a1f73ec78e6f 145 SUPERFAMILY SSF158442 15 139 1.7E-29 T 18-10-2018 IPR023380 DsbB-like superfamily SHALO_1806 1140d945994cc647a702a1f73ec78e6f 145 PIRSF PIRSF036659 5 144 4.0E-48 T 18-10-2018 IPR012187 Disulphide bond formation protein BdbC SHALO_1806 1140d945994cc647a702a1f73ec78e6f 145 Hamap MF_00287 Probable disulfide formation protein [bdbC]. 8 143 21.844 T 18-10-2018 IPR012187 Disulphide bond formation protein BdbC SHALO_2198 861a70d40ac5f7c100fb090c9fed6102 321 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 2 319 1.8E-81 T 18-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 SHALO_2198 861a70d40ac5f7c100fb090c9fed6102 321 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 18 - T 18-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_2198 861a70d40ac5f7c100fb090c9fed6102 321 Gene3D G3DSA:1.10.240.10 184 287 1.3E-106 T 18-10-2018 SHALO_2198 861a70d40ac5f7c100fb090c9fed6102 321 Pfam PF00579 tRNA synthetases class I (W and Y) 1 268 7.3E-53 T 18-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_2198 861a70d40ac5f7c100fb090c9fed6102 321 SUPERFAMILY SSF52374 2 319 1.1E-76 T 18-10-2018 SHALO_2198 861a70d40ac5f7c100fb090c9fed6102 321 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 138 159 1.3E-23 T 18-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 SHALO_2198 861a70d40ac5f7c100fb090c9fed6102 321 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 189 199 1.3E-23 T 18-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 SHALO_2198 861a70d40ac5f7c100fb090c9fed6102 321 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 63 82 1.3E-23 T 18-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 SHALO_2198 861a70d40ac5f7c100fb090c9fed6102 321 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 13 29 1.3E-23 T 18-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 SHALO_2198 861a70d40ac5f7c100fb090c9fed6102 321 Gene3D G3DSA:3.40.50.620 2 319 1.3E-106 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_1809 04edda2c9264271a8f6e3ab3bb4f97ed 262 Gene3D G3DSA:1.10.3680.10 38 177 1.1E-11 T 18-10-2018 IPR029024 TerB-like SHALO_1809 04edda2c9264271a8f6e3ab3bb4f97ed 262 Gene3D G3DSA:1.10.287.110 183 262 9.8E-15 T 18-10-2018 IPR036869 Chaperone J-domain superfamily SHALO_1809 04edda2c9264271a8f6e3ab3bb4f97ed 262 SMART SM00271 197 262 7.8E-13 T 18-10-2018 IPR001623 DnaJ domain SHALO_1809 04edda2c9264271a8f6e3ab3bb4f97ed 262 SUPERFAMILY SSF46565 138 260 1.44E-18 T 18-10-2018 IPR036869 Chaperone J-domain superfamily SHALO_1809 04edda2c9264271a8f6e3ab3bb4f97ed 262 Pfam PF05099 Tellurite resistance protein TerB 59 177 1.4E-10 T 18-10-2018 IPR007791 Co-chaperone DjlA, N-terminal SHALO_1809 04edda2c9264271a8f6e3ab3bb4f97ed 262 PRINTS PR00625 DnaJ domain signature 200 218 3.3E-10 T 18-10-2018 IPR001623 DnaJ domain SHALO_1809 04edda2c9264271a8f6e3ab3bb4f97ed 262 PRINTS PR00625 DnaJ domain signature 218 233 3.3E-10 T 18-10-2018 IPR001623 DnaJ domain SHALO_1809 04edda2c9264271a8f6e3ab3bb4f97ed 262 PRINTS PR00625 DnaJ domain signature 242 262 3.3E-10 T 18-10-2018 IPR001623 DnaJ domain SHALO_1809 04edda2c9264271a8f6e3ab3bb4f97ed 262 Pfam PF00226 DnaJ domain 198 261 2.2E-12 T 18-10-2018 IPR001623 DnaJ domain SHALO_0392 2c6b59af47d8d9bc1eb49229c982695b 309 SMART SM01400 4 120 2.8E-78 T 18-10-2018 SHALO_0392 2c6b59af47d8d9bc1eb49229c982695b 309 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 4 308 1.5E-126 T 18-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 SHALO_0392 2c6b59af47d8d9bc1eb49229c982695b 309 Gene3D G3DSA:3.40.50.2020 7 297 4.7E-130 T 18-10-2018 SHALO_0392 2c6b59af47d8d9bc1eb49229c982695b 309 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 128 143 - T 18-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 SHALO_0392 2c6b59af47d8d9bc1eb49229c982695b 309 Gene3D G3DSA:3.40.50.2020 147 285 4.7E-130 T 18-10-2018 SHALO_0392 2c6b59af47d8d9bc1eb49229c982695b 309 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 5 120 1.9E-49 T 18-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 SHALO_0392 2c6b59af47d8d9bc1eb49229c982695b 309 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 4 309 48.65 T 18-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 SHALO_0392 2c6b59af47d8d9bc1eb49229c982695b 309 SUPERFAMILY SSF53271 69 301 5.58E-67 T 18-10-2018 IPR029057 Phosphoribosyltransferase-like SHALO_0392 2c6b59af47d8d9bc1eb49229c982695b 309 Pfam PF14572 Phosphoribosyl synthetase-associated domain 198 308 3.8E-28 T 18-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 SHALO_2890 3570a2e0ba639051da0b1209660b9bf0 335 SUPERFAMILY SSF53067 150 324 2.9E-36 T 18-10-2018 SHALO_2890 3570a2e0ba639051da0b1209660b9bf0 335 Gene3D G3DSA:3.90.640.10 182 254 2.2E-96 T 18-10-2018 SHALO_2890 3570a2e0ba639051da0b1209660b9bf0 335 Gene3D G3DSA:3.30.420.40 150 312 2.2E-96 T 18-10-2018 SHALO_2890 3570a2e0ba639051da0b1209660b9bf0 335 SUPERFAMILY SSF53067 10 142 7.05E-24 T 18-10-2018 SHALO_2890 3570a2e0ba639051da0b1209660b9bf0 335 Pfam PF06723 MreB/Mbl protein 9 328 1.0E-93 T 18-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 SHALO_2890 3570a2e0ba639051da0b1209660b9bf0 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 66 89 7.7E-24 T 18-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 SHALO_2890 3570a2e0ba639051da0b1209660b9bf0 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 128 147 7.7E-24 T 18-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 SHALO_2890 3570a2e0ba639051da0b1209660b9bf0 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 46 64 7.7E-24 T 18-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 SHALO_2890 3570a2e0ba639051da0b1209660b9bf0 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 183 203 7.7E-24 T 18-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 SHALO_2890 3570a2e0ba639051da0b1209660b9bf0 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 295 321 7.7E-24 T 18-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 SHALO_2890 3570a2e0ba639051da0b1209660b9bf0 335 Gene3D G3DSA:3.30.420.40 12 322 2.2E-96 T 18-10-2018 SHALO_0813 22ebb46b1aa2e579f248a701009407e1 536 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 337 504 2.1E-29 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_0813 22ebb46b1aa2e579f248a701009407e1 536 SMART SM00283 265 534 1.2E-40 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_0813 22ebb46b1aa2e579f248a701009407e1 536 SUPERFAMILY SSF58104 225 535 6.1E-55 T 18-10-2018 SHALO_0813 22ebb46b1aa2e579f248a701009407e1 536 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 399 428 3.2E-19 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 SHALO_0813 22ebb46b1aa2e579f248a701009407e1 536 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 370 397 3.2E-19 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 SHALO_0813 22ebb46b1aa2e579f248a701009407e1 536 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 183 203 3.2E-19 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 SHALO_0813 22ebb46b1aa2e579f248a701009407e1 536 Gene3D G3DSA:1.10.287.950 203 536 2.5E-54 T 18-10-2018 SHALO_2223 123db1638c9c8d4b34e20d340d7e33ba 335 SUPERFAMILY SSF89000 286 333 6.67E-16 T 18-10-2018 SHALO_2223 123db1638c9c8d4b34e20d340d7e33ba 335 Hamap MF_01656 4-hydroxy-2-oxovalerate aldolase [mhpE]. 1 335 132.899 T 18-10-2018 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 SHALO_2223 123db1638c9c8d4b34e20d340d7e33ba 335 Pfam PF00682 HMGL-like 4 262 1.5E-50 T 18-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 SHALO_2223 123db1638c9c8d4b34e20d340d7e33ba 335 Gene3D G3DSA:3.20.20.70 1 265 8.7E-75 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_2223 123db1638c9c8d4b34e20d340d7e33ba 335 Pfam PF07836 DmpG-like communication domain 272 333 2.6E-25 T 18-10-2018 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 SHALO_2223 123db1638c9c8d4b34e20d340d7e33ba 335 Gene3D G3DSA:1.10.8.60 273 335 8.3E-25 T 18-10-2018 SHALO_2223 123db1638c9c8d4b34e20d340d7e33ba 335 TIGRFAM TIGR03217 4OH_2_O_val_ald: 4-hydroxy-2-oxovalerate aldolase 4 334 8.4E-118 T 18-10-2018 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 SHALO_2223 123db1638c9c8d4b34e20d340d7e33ba 335 ProDom PD005364 ALDOLASE 4-HYDROXY-2-OXOVALERATE LYASE PYRUVATE 4.1.3.- PLASMID HMG-COA LYASE-LIKE TRANSFERASE HOA 270 331 8.0E-15 T 18-10-2018 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 SHALO_2223 123db1638c9c8d4b34e20d340d7e33ba 335 SUPERFAMILY SSF51569 1 271 7.87E-62 T 18-10-2018 SHALO_0317 9f0d51988d6429c63321e606fbcc3a9b 421 Gene3D G3DSA:3.80.30.20 6 331 1.4E-53 T 18-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe SHALO_0317 9f0d51988d6429c63321e606fbcc3a9b 421 SUPERFAMILY SSF102114 22 405 1.44E-59 T 18-10-2018 SHALO_0317 9f0d51988d6429c63321e606fbcc3a9b 421 SMART SM00729 42 257 3.7E-27 T 18-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 SHALO_0317 9f0d51988d6429c63321e606fbcc3a9b 421 Pfam PF13394 4Fe-4S single cluster domain 46 130 4.8E-7 T 18-10-2018 SHALO_0317 9f0d51988d6429c63321e606fbcc3a9b 421 Pfam PF04055 Radical SAM superfamily 47 212 2.1E-14 T 18-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 SHALO_2183 25d72236379c71ea44ae5d8cf5366db0 828 SUPERFAMILY SSF82866 598 819 1.57E-26 T 18-10-2018 SHALO_2183 25d72236379c71ea44ae5d8cf5366db0 828 Pfam PF02460 Patched family 654 817 2.8E-6 T 18-10-2018 IPR003392 Protein patched/dispatched GO:0016021 SHALO_2183 25d72236379c71ea44ae5d8cf5366db0 828 Gene3D G3DSA:1.20.1640.10 642 828 2.1E-11 T 18-10-2018 SHALO_2183 25d72236379c71ea44ae5d8cf5366db0 828 SUPERFAMILY SSF82866 211 413 3.4E-22 T 18-10-2018 SHALO_2183 25d72236379c71ea44ae5d8cf5366db0 828 Pfam PF03176 MMPL family 212 411 1.7E-6 T 18-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 SHALO_1429 c7c1f9566877749fcc16946c48d14094 290 SUPERFAMILY SSF47240 12 128 1.74E-8 T 18-10-2018 IPR009078 Ferritin-like superfamily SHALO_1908 0ef340debfde425b5480d4fca174149e 210 PIRSF PIRSF006324 1 209 9.9E-56 T 18-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 SHALO_1908 0ef340debfde425b5480d4fca174149e 210 Pfam PF01810 LysE type translocator 15 205 1.1E-32 T 18-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 SHALO_0949 9e85a0b3a938226f27997c425a63bc10 929 SUPERFAMILY SSF50692 794 929 1.35E-38 T 18-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily SHALO_0949 9e85a0b3a938226f27997c425a63bc10 929 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 45 62 - T 18-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 SHALO_0949 9e85a0b3a938226f27997c425a63bc10 929 Hamap MF_01630 Periplasmic nitrate reductase [napA]. 1 929 31.231 T 18-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 SHALO_0949 9e85a0b3a938226f27997c425a63bc10 929 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 3 22 1.9E-7 T 18-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal SHALO_0949 9e85a0b3a938226f27997c425a63bc10 929 Pfam PF01568 Molydopterin dinucleotide binding domain 816 923 1.3E-22 T 18-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 SHALO_0949 9e85a0b3a938226f27997c425a63bc10 929 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 41 93 2.5E-18 T 18-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0949 9e85a0b3a938226f27997c425a63bc10 929 SMART SM00926 40 94 1.5E-15 T 18-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0949 9e85a0b3a938226f27997c425a63bc10 929 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 26 1.6E-6 T 18-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal SHALO_0949 9e85a0b3a938226f27997c425a63bc10 929 Pfam PF00384 Molybdopterin oxidoreductase 97 619 1.3E-66 T 18-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0949 9e85a0b3a938226f27997c425a63bc10 929 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 3 929 0.0 T 18-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 SHALO_0949 9e85a0b3a938226f27997c425a63bc10 929 SUPERFAMILY SSF53706 39 817 7.85E-159 T 18-10-2018 SHALO_0949 9e85a0b3a938226f27997c425a63bc10 929 Gene3D G3DSA:2.40.40.20 805 929 1.5E-43 T 18-10-2018 SHALO_0796 bacdd7817c8b7d9d0a7a2125825d6f9d 461 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 18-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 SHALO_0796 bacdd7817c8b7d9d0a7a2125825d6f9d 461 Pfam PF00206 Lyase 7 301 2.2E-78 T 18-10-2018 IPR022761 Fumarate lyase, N-terminal SHALO_0796 bacdd7817c8b7d9d0a7a2125825d6f9d 461 Hamap MF_00006 Argininosuccinate lyase [argH]. 3 455 40.55 T 18-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 SHALO_0796 bacdd7817c8b7d9d0a7a2125825d6f9d 461 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 7.3E-26 T 18-10-2018 IPR000362 Fumarate lyase family SHALO_0796 bacdd7817c8b7d9d0a7a2125825d6f9d 461 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 7.3E-26 T 18-10-2018 IPR000362 Fumarate lyase family SHALO_0796 bacdd7817c8b7d9d0a7a2125825d6f9d 461 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 7.3E-26 T 18-10-2018 IPR000362 Fumarate lyase family SHALO_0796 bacdd7817c8b7d9d0a7a2125825d6f9d 461 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 7.3E-26 T 18-10-2018 IPR000362 Fumarate lyase family SHALO_0796 bacdd7817c8b7d9d0a7a2125825d6f9d 461 SUPERFAMILY SSF48557 7 458 2.98E-140 T 18-10-2018 IPR008948 L-Aspartase-like GO:0003824 SHALO_0796 bacdd7817c8b7d9d0a7a2125825d6f9d 461 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 1.0E-62 T 18-10-2018 SHALO_0796 bacdd7817c8b7d9d0a7a2125825d6f9d 461 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 1.0E-62 T 18-10-2018 SHALO_0796 bacdd7817c8b7d9d0a7a2125825d6f9d 461 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 1.0E-62 T 18-10-2018 SHALO_0796 bacdd7817c8b7d9d0a7a2125825d6f9d 461 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 1.0E-62 T 18-10-2018 SHALO_0796 bacdd7817c8b7d9d0a7a2125825d6f9d 461 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 1.0E-62 T 18-10-2018 SHALO_0796 bacdd7817c8b7d9d0a7a2125825d6f9d 461 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 1.0E-62 T 18-10-2018 SHALO_0796 bacdd7817c8b7d9d0a7a2125825d6f9d 461 Gene3D G3DSA:1.10.275.10 26 230 7.4E-182 T 18-10-2018 IPR024083 Fumarase/histidase, N-terminal SHALO_0796 bacdd7817c8b7d9d0a7a2125825d6f9d 461 Pfam PF14698 Argininosuccinate lyase C-terminal 366 432 2.5E-18 T 18-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 SHALO_0796 bacdd7817c8b7d9d0a7a2125825d6f9d 461 TIGRFAM TIGR00838 argH: argininosuccinate lyase 4 454 1.2E-182 T 18-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 SHALO_0796 bacdd7817c8b7d9d0a7a2125825d6f9d 461 Gene3D G3DSA:1.10.40.30 361 434 7.4E-182 T 18-10-2018 SHALO_0796 bacdd7817c8b7d9d0a7a2125825d6f9d 461 Gene3D G3DSA:1.20.200.10 120 450 7.4E-182 T 18-10-2018 SHALO_0539 b50f917d4b2eb2fde425457325bd9c69 218 SUPERFAMILY SSF46785 141 215 2.67E-13 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SHALO_0539 b50f917d4b2eb2fde425457325bd9c69 218 Gene3D G3DSA:2.60.120.1460 7 215 7.9E-46 T 18-10-2018 SHALO_0539 b50f917d4b2eb2fde425457325bd9c69 218 SUPERFAMILY SSF51206 4 137 7.86E-26 T 18-10-2018 IPR018490 Cyclic nucleotide-binding-like SHALO_0539 b50f917d4b2eb2fde425457325bd9c69 218 Pfam PF13545 Crp-like helix-turn-helix domain 143 213 6.6E-12 T 18-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SHALO_0539 b50f917d4b2eb2fde425457325bd9c69 218 SMART SM00419 155 207 0.0024 T 18-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SHALO_0539 b50f917d4b2eb2fde425457325bd9c69 218 SMART SM00100 3 125 4.0E-5 T 18-10-2018 IPR000595 Cyclic nucleotide-binding domain SHALO_0539 b50f917d4b2eb2fde425457325bd9c69 218 Pfam PF00027 Cyclic nucleotide-binding domain 22 108 1.8E-13 T 18-10-2018 IPR000595 Cyclic nucleotide-binding domain SHALO_0126 e7e069ead4f12419c5a4b6055a4c8f65 64 SUPERFAMILY SSF143034 2 62 2.22E-15 T 18-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_0126 e7e069ead4f12419c5a4b6055a4c8f65 64 Gene3D G3DSA:2.40.50.530 4 62 5.3E-14 T 18-10-2018 SHALO_0126 e7e069ead4f12419c5a4b6055a4c8f65 64 PRINTS PR00064 Ribosomal protein L35 signature 20 34 3.5E-11 T 18-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 SHALO_0126 e7e069ead4f12419c5a4b6055a4c8f65 64 PRINTS PR00064 Ribosomal protein L35 signature 3 20 3.5E-11 T 18-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 SHALO_0126 e7e069ead4f12419c5a4b6055a4c8f65 64 PRINTS PR00064 Ribosomal protein L35 signature 35 53 3.5E-11 T 18-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 SHALO_0126 e7e069ead4f12419c5a4b6055a4c8f65 64 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 63 15.505 T 18-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 SHALO_0126 e7e069ead4f12419c5a4b6055a4c8f65 64 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 30 - T 18-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_0126 e7e069ead4f12419c5a4b6055a4c8f65 64 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 62 1.5E-20 T 18-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 SHALO_0126 e7e069ead4f12419c5a4b6055a4c8f65 64 Pfam PF01632 Ribosomal protein L35 2 61 6.9E-18 T 18-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_1079 3a3ab987cbe5aea82ffb65897599e328 457 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 303 314 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_1079 3a3ab987cbe5aea82ffb65897599e328 457 Gene3D G3DSA:1.10.1060.10 278 384 8.2E-8 T 18-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 SHALO_1079 3a3ab987cbe5aea82ffb65897599e328 457 Pfam PF02589 LUD domain 65 282 2.8E-44 T 18-10-2018 IPR003741 LUD domain SHALO_1079 3a3ab987cbe5aea82ffb65897599e328 457 SUPERFAMILY SSF54862 281 384 3.68E-14 T 18-10-2018 SHALO_1079 3a3ab987cbe5aea82ffb65897599e328 457 Gene3D G3DSA:3.40.50.10420 132 268 1.1E-9 T 18-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily SHALO_1079 3a3ab987cbe5aea82ffb65897599e328 457 SUPERFAMILY SSF100950 60 285 2.72E-34 T 18-10-2018 IPR037171 NagB/RpiA transferase-like SHALO_1079 3a3ab987cbe5aea82ffb65897599e328 457 Pfam PF13183 4Fe-4S dicluster domain 301 366 2.0E-8 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_1499 56bf57e5f17337fb273e977dce554f03 223 SUPERFAMILY SSF52172 4 171 1.38E-32 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_1499 56bf57e5f17337fb273e977dce554f03 223 Gene3D G3DSA:3.40.50.2300 3 129 6.0E-31 T 18-10-2018 SHALO_1499 56bf57e5f17337fb273e977dce554f03 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 219 3.5E-9 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_1499 56bf57e5f17337fb273e977dce554f03 223 SMART SM00448 5 116 1.2E-23 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_1499 56bf57e5f17337fb273e977dce554f03 223 Pfam PF00072 Response regulator receiver domain 7 116 2.7E-23 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_1499 56bf57e5f17337fb273e977dce554f03 223 Gene3D G3DSA:1.10.10.10 130 221 2.7E-14 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_1499 56bf57e5f17337fb273e977dce554f03 223 SMART SM00862 150 219 3.3E-9 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_2748 3d9d0a6a618d39e712cf1236c4e315b5 768 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 751 768 - T 18-10-2018 IPR010917 TonB-dependent receptor, conserved site SHALO_2748 3d9d0a6a618d39e712cf1236c4e315b5 768 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 137 768 2.5E-89 T 18-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 SHALO_2748 3d9d0a6a618d39e712cf1236c4e315b5 768 SMART SM00965 44 94 0.0018 T 18-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 SHALO_2748 3d9d0a6a618d39e712cf1236c4e315b5 768 Gene3D G3DSA:3.55.50.30 19 112 2.0E-10 T 18-10-2018 SHALO_2748 3d9d0a6a618d39e712cf1236c4e315b5 768 Pfam PF00593 TonB dependent receptor 325 767 8.8E-37 T 18-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel SHALO_2748 3d9d0a6a618d39e712cf1236c4e315b5 768 Gene3D G3DSA:2.170.130.10 113 242 6.9E-34 T 18-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily SHALO_2748 3d9d0a6a618d39e712cf1236c4e315b5 768 SUPERFAMILY SSF56935 98 768 1.72E-108 T 18-10-2018 SHALO_2748 3d9d0a6a618d39e712cf1236c4e315b5 768 Gene3D G3DSA:2.40.170.20 243 768 6.0E-131 T 18-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily SHALO_2748 3d9d0a6a618d39e712cf1236c4e315b5 768 Pfam PF07715 TonB-dependent Receptor Plug Domain 135 235 1.7E-11 T 18-10-2018 IPR012910 TonB-dependent receptor, plug domain SHALO_1172 96130acade178cf92905a3d680b23ad7 564 Pfam PF00999 Sodium/hydrogen exchanger family 10 373 8.6E-65 T 18-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 SHALO_1172 96130acade178cf92905a3d680b23ad7 564 Gene3D G3DSA:1.20.1530.20 2 385 7.8E-80 T 18-10-2018 IPR038770 Sodium/solute symporter superfamily SHALO_1172 96130acade178cf92905a3d680b23ad7 564 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 13 285 1.8E-72 T 18-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 SHALO_1172 96130acade178cf92905a3d680b23ad7 564 SUPERFAMILY SSF51735 401 543 6.56E-25 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_1172 96130acade178cf92905a3d680b23ad7 564 Pfam PF02254 TrkA-N domain 405 518 9.9E-19 T 18-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SHALO_1172 96130acade178cf92905a3d680b23ad7 564 Gene3D G3DSA:3.40.50.720 400 563 3.0E-31 T 18-10-2018 SHALO_1790 062f190c72c8649d6593adc6056a0af4 434 Gene3D G3DSA:3.90.1150.10 12 422 2.8E-161 T 18-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 SHALO_1790 062f190c72c8649d6593adc6056a0af4 434 Gene3D G3DSA:3.40.640.10 64 333 2.8E-161 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 SHALO_1790 062f190c72c8649d6593adc6056a0af4 434 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 2 431 48.51 T 18-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 SHALO_1790 062f190c72c8649d6593adc6056a0af4 434 PIRSF PIRSF000521 17 431 1.9E-30 T 18-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SHALO_1790 062f190c72c8649d6593adc6056a0af4 434 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 243 280 - T 18-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SHALO_1790 062f190c72c8649d6593adc6056a0af4 434 Pfam PF00202 Aminotransferase class-III 25 426 2.0E-121 T 18-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SHALO_1790 062f190c72c8649d6593adc6056a0af4 434 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 14 428 1.7E-171 T 18-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 SHALO_1790 062f190c72c8649d6593adc6056a0af4 434 SUPERFAMILY SSF53383 10 428 2.87E-122 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase SHALO_2067 8fca7791ef0e2d73f5e3526b0d2576bb 164 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 113 160 5.1E-11 T 18-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain SHALO_2067 8fca7791ef0e2d73f5e3526b0d2576bb 164 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 18-10-2018 IPR019776 Flagellar basal body rod protein, conserved site SHALO_2067 8fca7791ef0e2d73f5e3526b0d2576bb 164 Pfam PF00460 Flagella basal body rod protein 9 34 3.0E-9 T 18-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 SHALO_2067 8fca7791ef0e2d73f5e3526b0d2576bb 164 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 163 4.9E-55 T 18-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 SHALO_2228 1b901a378ee6f3a1eee268a9b186cc5d 317 Pfam PF01370 NAD dependent epimerase/dehydratase family 7 249 1.1E-80 T 18-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 SHALO_2228 1b901a378ee6f3a1eee268a9b186cc5d 317 Gene3D G3DSA:3.40.50.720 7 306 1.7E-103 T 18-10-2018 SHALO_2228 1b901a378ee6f3a1eee268a9b186cc5d 317 Hamap MF_00956 GDP-L-fucose synthase [fcl]. 4 317 48.641 T 18-10-2018 IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase GO:0009226|GO:0016491 KEGG: 00051+1.1.1.271|KEGG: 00520+1.1.1.271|MetaCyc: PWY-66|Reactome: R-HSA-6787639 SHALO_2228 1b901a378ee6f3a1eee268a9b186cc5d 317 SUPERFAMILY SSF51735 2 317 2.46E-68 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_2228 1b901a378ee6f3a1eee268a9b186cc5d 317 Gene3D G3DSA:3.90.25.10 169 313 1.7E-103 T 18-10-2018 SHALO_1466 980ec0cd07f2921e55ca2f17eff11b89 296 Pfam PF07650 KH domain 206 281 8.1E-16 T 18-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_1466 980ec0cd07f2921e55ca2f17eff11b89 296 Hamap MF_00367 GTPase Era [era]. 5 293 30.725 T 18-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_1466 980ec0cd07f2921e55ca2f17eff11b89 296 SUPERFAMILY SSF54814 180 293 2.06E-33 T 18-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 SHALO_1466 980ec0cd07f2921e55ca2f17eff11b89 296 Pfam PF01926 50S ribosome-binding GTPase 10 122 1.7E-20 T 18-10-2018 IPR006073 GTP binding domain GO:0005525 SHALO_1466 980ec0cd07f2921e55ca2f17eff11b89 296 TIGRFAM TIGR00436 era: GTP-binding protein Era 8 275 7.0E-67 T 18-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_1466 980ec0cd07f2921e55ca2f17eff11b89 296 Gene3D G3DSA:3.30.300.20 184 295 1.2E-33 T 18-10-2018 IPR015946 K homology domain-like, alpha/beta SHALO_1466 980ec0cd07f2921e55ca2f17eff11b89 296 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 157 1.5E-18 T 18-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 SHALO_1466 980ec0cd07f2921e55ca2f17eff11b89 296 Gene3D G3DSA:3.40.50.300 1 182 1.2E-34 T 18-10-2018 SHALO_1466 980ec0cd07f2921e55ca2f17eff11b89 296 SUPERFAMILY SSF52540 9 211 2.65E-34 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_2911 61db22e4e9908632ba2d20306fbe674d 157 SUPERFAMILY SSF55729 8 155 8.58E-26 T 18-10-2018 IPR016181 Acyl-CoA N-acyltransferase SHALO_2911 61db22e4e9908632ba2d20306fbe674d 157 Gene3D G3DSA:3.40.630.30 2 153 2.3E-38 T 18-10-2018 SHALO_2911 61db22e4e9908632ba2d20306fbe674d 157 Pfam PF13302 Acetyltransferase (GNAT) domain 5 137 7.2E-17 T 18-10-2018 IPR000182 GNAT domain SHALO_2911 61db22e4e9908632ba2d20306fbe674d 157 TIGRFAM TIGR03585 PseH: UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase 7 141 1.7E-43 T 18-10-2018 IPR020036 UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase SHALO_1744 9b756d778cc94775dadaaabe8ab8a568 858 SUPERFAMILY SSF52540 4 399 3.09E-77 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_1744 9b756d778cc94775dadaaabe8ab8a568 858 Gene3D G3DSA:3.40.50.300 17 400 0.0 T 18-10-2018 SHALO_1744 9b756d778cc94775dadaaabe8ab8a568 858 Gene3D G3DSA:3.10.450.50 779 850 4.7E-10 T 18-10-2018 SHALO_1744 9b756d778cc94775dadaaabe8ab8a568 858 Gene3D G3DSA:3.90.1440.10 231 352 0.0 T 18-10-2018 SHALO_1744 9b756d778cc94775dadaaabe8ab8a568 858 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 501 6.1E-229 T 18-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SHALO_1744 9b756d778cc94775dadaaabe8ab8a568 858 Pfam PF07517 SecA DEAD-like domain 7 385 6.0E-123 T 18-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 SHALO_1744 9b756d778cc94775dadaaabe8ab8a568 858 Gene3D G3DSA:3.40.50.300 401 574 0.0 T 18-10-2018 SHALO_1744 9b756d778cc94775dadaaabe8ab8a568 858 Gene3D G3DSA:1.10.1200.230 625 709 0.0 T 18-10-2018 SHALO_1744 9b756d778cc94775dadaaabe8ab8a568 858 Gene3D G3DSA:1.10.3060.10 575 778 0.0 T 18-10-2018 SHALO_1744 9b756d778cc94775dadaaabe8ab8a568 858 SMART SM00958 230 342 1.2E-62 T 18-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 SHALO_1744 9b756d778cc94775dadaaabe8ab8a568 858 SUPERFAMILY SSF81767 229 352 8.5E-44 T 18-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 SHALO_1744 9b756d778cc94775dadaaabe8ab8a568 858 Pfam PF01043 SecA preprotein cross-linking domain 237 342 9.3E-38 T 18-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 SHALO_1744 9b756d778cc94775dadaaabe8ab8a568 858 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 785 19.328 T 18-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SHALO_1744 9b756d778cc94775dadaaabe8ab8a568 858 Pfam PF07516 SecA Wing and Scaffold domain 573 780 8.9E-55 T 18-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 SHALO_1744 9b756d778cc94775dadaaabe8ab8a568 858 SMART SM00957 6 386 2.7E-259 T 18-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 SHALO_1744 9b756d778cc94775dadaaabe8ab8a568 858 SUPERFAMILY SSF52540 400 573 3.67E-53 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_1744 9b756d778cc94775dadaaabe8ab8a568 858 PRINTS PR00906 SecA protein signature 102 116 2.6E-66 T 18-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SHALO_1744 9b756d778cc94775dadaaabe8ab8a568 858 PRINTS PR00906 SecA protein signature 323 345 2.6E-66 T 18-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SHALO_1744 9b756d778cc94775dadaaabe8ab8a568 858 PRINTS PR00906 SecA protein signature 172 192 2.6E-66 T 18-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SHALO_1744 9b756d778cc94775dadaaabe8ab8a568 858 PRINTS PR00906 SecA protein signature 118 128 2.6E-66 T 18-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SHALO_1744 9b756d778cc94775dadaaabe8ab8a568 858 PRINTS PR00906 SecA protein signature 397 410 2.6E-66 T 18-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SHALO_1744 9b756d778cc94775dadaaabe8ab8a568 858 PRINTS PR00906 SecA protein signature 64 88 2.6E-66 T 18-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SHALO_1744 9b756d778cc94775dadaaabe8ab8a568 858 PRINTS PR00906 SecA protein signature 360 377 2.6E-66 T 18-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SHALO_1744 9b756d778cc94775dadaaabe8ab8a568 858 Pfam PF02810 SEC-C motif 831 849 8.8E-10 T 18-10-2018 IPR004027 SEC-C motif SHALO_1744 9b756d778cc94775dadaaabe8ab8a568 858 SUPERFAMILY SSF81886 575 839 9.94E-66 T 18-10-2018 IPR036266 SecA, Wing/Scaffold superfamily SHALO_1744 9b756d778cc94775dadaaabe8ab8a568 858 ProSitePatterns PS01312 SecA family signature. 484 499 - T 18-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 SHALO_1287 a3e2bb358bee66cb06512b3b4c60f15e 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 163 229 1.1E-12 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_1287 a3e2bb358bee66cb06512b3b4c60f15e 237 Gene3D G3DSA:1.10.10.10 139 233 8.5E-15 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_1287 a3e2bb358bee66cb06512b3b4c60f15e 237 Gene3D G3DSA:3.40.50.2300 5 138 9.0E-31 T 18-10-2018 SHALO_1287 a3e2bb358bee66cb06512b3b4c60f15e 237 Pfam PF00072 Response regulator receiver domain 15 124 6.1E-24 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_1287 a3e2bb358bee66cb06512b3b4c60f15e 237 SMART SM00448 13 124 1.2E-24 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_1287 a3e2bb358bee66cb06512b3b4c60f15e 237 SUPERFAMILY SSF46894 142 230 4.54E-14 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHALO_1287 a3e2bb358bee66cb06512b3b4c60f15e 237 SUPERFAMILY SSF52172 11 141 8.68E-33 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_1287 a3e2bb358bee66cb06512b3b4c60f15e 237 SMART SM00862 160 230 1.0E-11 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_2017 237aaae6d0a022288fff056883f8b548 573 TIGRFAM TIGR02290 M3_fam_3: oligoendopeptidase, pepF/M3 family 2 569 2.6E-172 T 18-10-2018 IPR011977 Peptidase M3B, oligoendopeptidase-related clade 3 SHALO_2017 237aaae6d0a022288fff056883f8b548 573 Gene3D G3DSA:1.10.1370.30 12 569 2.9E-126 T 18-10-2018 SHALO_2017 237aaae6d0a022288fff056883f8b548 573 Pfam PF08439 Oligopeptidase F 100 166 6.5E-11 T 18-10-2018 IPR013647 Oligopeptidase F, N-terminal domain SHALO_2017 237aaae6d0a022288fff056883f8b548 573 SUPERFAMILY SSF55486 42 568 1.6E-100 T 18-10-2018 SHALO_2017 237aaae6d0a022288fff056883f8b548 573 Pfam PF01432 Peptidase family M3 183 554 7.3E-53 T 18-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 SHALO_0128 5c06d48e9753a331c981c3212490deff 455 Gene3D G3DSA:2.60.40.10 336 447 4.3E-5 T 18-10-2018 IPR013783 Immunoglobulin-like fold SHALO_0128 5c06d48e9753a331c981c3212490deff 455 Gene3D G3DSA:3.30.70.20 190 268 4.2E-9 T 18-10-2018 SHALO_0128 5c06d48e9753a331c981c3212490deff 455 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 329 448 2.4E-21 T 18-10-2018 IPR032879 FixG, C-terminal immunoglobulin-like domain SHALO_0128 5c06d48e9753a331c981c3212490deff 455 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 246 257 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_0128 5c06d48e9753a331c981c3212490deff 455 Pfam PF13746 4Fe-4S dicluster domain 191 297 1.2E-42 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_0128 5c06d48e9753a331c981c3212490deff 455 SUPERFAMILY SSF54862 78 319 1.67E-21 T 18-10-2018 SHALO_0128 5c06d48e9753a331c981c3212490deff 455 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 14 448 2.1E-148 T 18-10-2018 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021|GO:0055114 SHALO_0128 5c06d48e9753a331c981c3212490deff 455 Pfam PF12801 4Fe-4S binding domain 67 109 3.9E-13 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_2324 07bbfa490c4f5025097e9ef9d0547c33 1187 PIRSF PIRSF000159 1 1186 0.0 T 18-10-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 SHALO_2324 07bbfa490c4f5025097e9ef9d0547c33 1187 Gene3D G3DSA:3.30.70.20 673 792 3.3E-41 T 18-10-2018 SHALO_2324 07bbfa490c4f5025097e9ef9d0547c33 1187 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 943 1074 1.5E-8 T 18-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 SHALO_2324 07bbfa490c4f5025097e9ef9d0547c33 1187 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 269 368 5.7E-14 T 18-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II SHALO_2324 07bbfa490c4f5025097e9ef9d0547c33 1187 SUPERFAMILY SSF53323 416 670 1.09E-74 T 18-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 SHALO_2324 07bbfa490c4f5025097e9ef9d0547c33 1187 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 5 1176 0.0 T 18-10-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 SHALO_2324 07bbfa490c4f5025097e9ef9d0547c33 1187 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 18 247 5.3E-76 T 18-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 SHALO_2324 07bbfa490c4f5025097e9ef9d0547c33 1187 Pfam PF13484 4Fe-4S double cluster binding domain 692 763 1.8E-9 T 18-10-2018 SHALO_2324 07bbfa490c4f5025097e9ef9d0547c33 1187 SUPERFAMILY SSF54862 675 765 5.02E-18 T 18-10-2018 SHALO_2324 07bbfa490c4f5025097e9ef9d0547c33 1187 Gene3D G3DSA:3.40.50.970 2 258 5.1E-104 T 18-10-2018 SHALO_2324 07bbfa490c4f5025097e9ef9d0547c33 1187 Pfam PF10371 Domain of unknown function 638 681 6.0E-18 T 18-10-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 SHALO_2324 07bbfa490c4f5025097e9ef9d0547c33 1187 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 751 762 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_2324 07bbfa490c4f5025097e9ef9d0547c33 1187 Gene3D G3DSA:3.40.50.920 259 414 2.4E-54 T 18-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 SHALO_2324 07bbfa490c4f5025097e9ef9d0547c33 1187 Gene3D G3DSA:3.40.920.10 415 624 5.9E-80 T 18-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 SHALO_2324 07bbfa490c4f5025097e9ef9d0547c33 1187 SMART SM00890 625 683 1.1E-20 T 18-10-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 SHALO_2324 07bbfa490c4f5025097e9ef9d0547c33 1187 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 425 608 2.7E-27 T 18-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 SHALO_2324 07bbfa490c4f5025097e9ef9d0547c33 1187 SUPERFAMILY SSF52518 5 258 5.0E-75 T 18-10-2018 IPR029061 Thiamin diphosphate-binding fold SHALO_2324 07bbfa490c4f5025097e9ef9d0547c33 1187 Gene3D G3DSA:3.40.50.970 794 1179 1.7E-153 T 18-10-2018 SHALO_2324 07bbfa490c4f5025097e9ef9d0547c33 1187 SUPERFAMILY SSF52922 259 410 1.16E-44 T 18-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 SHALO_2324 07bbfa490c4f5025097e9ef9d0547c33 1187 SUPERFAMILY SSF52518 795 1183 1.06E-121 T 18-10-2018 IPR029061 Thiamin diphosphate-binding fold SHALO_2587 29e968ca8387202f7a1d11ebbbdcc840 252 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 4 245 1.7E-42 T 18-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 SHALO_2587 29e968ca8387202f7a1d11ebbbdcc840 252 Gene3D G3DSA:3.30.420.40 88 230 7.3E-72 T 18-10-2018 SHALO_2587 29e968ca8387202f7a1d11ebbbdcc840 252 TIGRFAM TIGR00241 CoA_E_activ: putative CoA-substrate-specific enzyme activase 3 245 4.5E-68 T 18-10-2018 IPR008275 CoA enzyme activase SHALO_2587 29e968ca8387202f7a1d11ebbbdcc840 252 SUPERFAMILY SSF53067 1 245 6.36E-40 T 18-10-2018 SHALO_2587 29e968ca8387202f7a1d11ebbbdcc840 252 Gene3D G3DSA:3.30.420.40 4 245 7.3E-72 T 18-10-2018 SHALO_0133 fa9352fe0016773333cd2bf94b144694 392 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 390 4.0E-120 T 18-10-2018 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain SHALO_0133 fa9352fe0016773333cd2bf94b144694 392 SUPERFAMILY SSF52440 179 288 6.91E-16 T 18-10-2018 IPR016185 Pre-ATP-grasp domain superfamily SHALO_0133 fa9352fe0016773333cd2bf94b144694 392 Gene3D G3DSA:3.30.1490.330 272 350 4.3E-21 T 18-10-2018 SHALO_0133 fa9352fe0016773333cd2bf94b144694 392 SUPERFAMILY SSF56059 12 389 1.45E-59 T 18-10-2018 SHALO_1628 50e0fb4191f8efaed5ce24815b18084c 487 Pfam PF00939 Sodium:sulfate symporter transmembrane region 7 487 6.0E-140 T 18-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 SHALO_1628 50e0fb4191f8efaed5ce24815b18084c 487 PIRSF PIRSF002457 1 487 1.1E-136 T 18-10-2018 IPR030676 Citrate carrier CitT-related SHALO_1628 50e0fb4191f8efaed5ce24815b18084c 487 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 26 481 4.9E-115 T 18-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 SHALO_1676 0e1a354434c12908a97cc065213a97b2 314 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 4 208 5.5E-73 T 18-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 SHALO_1676 0e1a354434c12908a97cc065213a97b2 314 Gene3D G3DSA:3.30.160.40 221 304 1.3E-19 T 18-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 SHALO_1676 0e1a354434c12908a97cc065213a97b2 314 PIRSF PIRSF001438 1 311 2.7E-108 T 18-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 SHALO_1676 0e1a354434c12908a97cc065213a97b2 314 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 230 246 - T 18-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 SHALO_1676 0e1a354434c12908a97cc065213a97b2 314 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 226 293 4.9E-13 T 18-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 SHALO_1676 0e1a354434c12908a97cc065213a97b2 314 Gene3D G3DSA:3.40.190.10 5 206 2.1E-77 T 18-10-2018 SHALO_1676 0e1a354434c12908a97cc065213a97b2 314 Gene3D G3DSA:3.40.190.10 101 202 2.1E-77 T 18-10-2018 SHALO_1676 0e1a354434c12908a97cc065213a97b2 314 SUPERFAMILY SSF53850 2 209 7.49E-75 T 18-10-2018 SHALO_1676 0e1a354434c12908a97cc065213a97b2 314 SUPERFAMILY SSF54782 219 304 8.37E-21 T 18-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 SHALO_1676 0e1a354434c12908a97cc065213a97b2 314 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 3 296 36.941 T 18-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 SHALO_1676 0e1a354434c12908a97cc065213a97b2 314 PRINTS PR00151 Porphobilinogen deaminase signature 43 63 8.9E-46 T 18-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 SHALO_1676 0e1a354434c12908a97cc065213a97b2 314 PRINTS PR00151 Porphobilinogen deaminase signature 229 246 8.9E-46 T 18-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 SHALO_1676 0e1a354434c12908a97cc065213a97b2 314 PRINTS PR00151 Porphobilinogen deaminase signature 141 158 8.9E-46 T 18-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 SHALO_1676 0e1a354434c12908a97cc065213a97b2 314 PRINTS PR00151 Porphobilinogen deaminase signature 122 139 8.9E-46 T 18-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 SHALO_1676 0e1a354434c12908a97cc065213a97b2 314 PRINTS PR00151 Porphobilinogen deaminase signature 74 93 8.9E-46 T 18-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 SHALO_1676 0e1a354434c12908a97cc065213a97b2 314 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 4 296 3.3E-100 T 18-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 SHALO_2095 92677ea94fdecc8bb5d2a68fd5002063 339 SMART SM00764 144 329 1.3E-111 T 18-10-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 SHALO_2095 92677ea94fdecc8bb5d2a68fd5002063 339 SUPERFAMILY SSF55729 19 117 6.2E-14 T 18-10-2018 IPR016181 Acyl-CoA N-acyltransferase SHALO_2095 92677ea94fdecc8bb5d2a68fd5002063 339 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 111 336 8.0E-65 T 18-10-2018 SHALO_2095 92677ea94fdecc8bb5d2a68fd5002063 339 Gene3D G3DSA:3.40.630.30 11 133 8.6E-13 T 18-10-2018 SHALO_2095 92677ea94fdecc8bb5d2a68fd5002063 339 SUPERFAMILY SSF52374 144 330 3.52E-21 T 18-10-2018 SHALO_2095 92677ea94fdecc8bb5d2a68fd5002063 339 Pfam PF13673 Acetyltransferase (GNAT) domain 24 113 9.1E-8 T 18-10-2018 IPR000182 GNAT domain SHALO_2095 92677ea94fdecc8bb5d2a68fd5002063 339 TIGRFAM TIGR00124 cit_ly_ligase: [citrate (pro-3S)-lyase] ligase 14 335 1.4E-127 T 18-10-2018 IPR005216 Citrate lyase ligase GO:0008771 SHALO_2095 92677ea94fdecc8bb5d2a68fd5002063 339 PIRSF PIRSF005751 2 339 1.2E-125 T 18-10-2018 IPR005216 Citrate lyase ligase GO:0008771 SHALO_2095 92677ea94fdecc8bb5d2a68fd5002063 339 Pfam PF08218 Citrate lyase ligase C-terminal domain 144 327 1.0E-77 T 18-10-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 SHALO_2095 92677ea94fdecc8bb5d2a68fd5002063 339 Gene3D G3DSA:3.40.50.620 143 321 2.8E-16 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_0361 8f866d4399e6bc0ebd5cb7c37e04b98a 129 PRINTS PR00162 Rieske 2Fe-2S subunit signature 115 127 8.8E-5 T 18-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 SHALO_0361 8f866d4399e6bc0ebd5cb7c37e04b98a 129 PRINTS PR00162 Rieske 2Fe-2S subunit signature 94 105 8.8E-5 T 18-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 SHALO_0361 8f866d4399e6bc0ebd5cb7c37e04b98a 129 Gene3D G3DSA:2.102.10.10 39 128 8.8E-22 T 18-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 SHALO_0361 8f866d4399e6bc0ebd5cb7c37e04b98a 129 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 5 43 1.4E-5 T 18-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal SHALO_0361 8f866d4399e6bc0ebd5cb7c37e04b98a 129 SUPERFAMILY SSF50022 29 127 3.7E-21 T 18-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 SHALO_0361 8f866d4399e6bc0ebd5cb7c37e04b98a 129 Pfam PF00355 Rieske [2Fe-2S] domain 51 126 2.2E-10 T 18-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 SHALO_0361 8f866d4399e6bc0ebd5cb7c37e04b98a 129 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 6 126 6.4E-34 T 18-10-2018 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 SHALO_0501 62c5801752badf1b3c6fa5509fe8664f 504 SUPERFAMILY SSF54292 1 123 1.52E-28 T 18-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 SHALO_0501 62c5801752badf1b3c6fa5509fe8664f 504 Gene3D G3DSA:2.20.25.90 217 274 1.6E-5 T 18-10-2018 SHALO_0501 62c5801752badf1b3c6fa5509fe8664f 504 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 75 4.7E-13 T 18-10-2018 SHALO_0501 62c5801752badf1b3c6fa5509fe8664f 504 SMART SM00929 83 123 4.6E-16 T 18-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0501 62c5801752badf1b3c6fa5509fe8664f 504 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 18-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0501 62c5801752badf1b3c6fa5509fe8664f 504 Gene3D G3DSA:3.30.70.20 127 205 2.8E-7 T 18-10-2018 SHALO_0501 62c5801752badf1b3c6fa5509fe8664f 504 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 84 122 2.5E-15 T 18-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0501 62c5801752badf1b3c6fa5509fe8664f 504 SUPERFAMILY SSF54862 80 210 2.34E-28 T 18-10-2018 SHALO_0501 62c5801752badf1b3c6fa5509fe8664f 504 SUPERFAMILY SSF53706 214 334 1.83E-14 T 18-10-2018 SHALO_0501 62c5801752badf1b3c6fa5509fe8664f 504 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 146 156 - T 18-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0501 62c5801752badf1b3c6fa5509fe8664f 504 Gene3D G3DSA:3.10.20.740 1 123 2.2E-34 T 18-10-2018 SHALO_1425 451eba60374ca142361133d1e5dac6db 277 SUPERFAMILY SSF52518 14 240 7.52E-68 T 18-10-2018 IPR029061 Thiamin diphosphate-binding fold SHALO_1425 451eba60374ca142361133d1e5dac6db 277 Gene3D G3DSA:3.40.50.970 27 203 2.7E-25 T 18-10-2018 SHALO_1425 451eba60374ca142361133d1e5dac6db 277 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 51 198 8.0E-33 T 18-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 SHALO_0573 f335f7a18b02c85f3e6bc190c8f0e003 237 ProSitePatterns PS00171 Triosephosphate isomerase active site. 157 167 - T 18-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_0573 f335f7a18b02c85f3e6bc190c8f0e003 237 SUPERFAMILY SSF51351 2 232 8.9E-61 T 18-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_0573 f335f7a18b02c85f3e6bc190c8f0e003 237 Pfam PF00121 Triosephosphate isomerase 2 229 3.1E-61 T 18-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_0573 f335f7a18b02c85f3e6bc190c8f0e003 237 Gene3D G3DSA:3.20.20.70 1 232 8.8E-66 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_1527 53aaaa80b8d68e2e5c4d267652212ac7 505 Pfam PF02602 Uroporphyrinogen-III synthase HemD 267 460 8.6E-17 T 18-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 SHALO_1527 53aaaa80b8d68e2e5c4d267652212ac7 505 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 5 215 1.4E-41 T 18-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 SHALO_1527 53aaaa80b8d68e2e5c4d267652212ac7 505 Gene3D G3DSA:3.30.950.10 120 268 2.3E-46 T 18-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 SHALO_1527 53aaaa80b8d68e2e5c4d267652212ac7 505 SUPERFAMILY SSF69618 252 461 6.02E-23 T 18-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 SHALO_1527 53aaaa80b8d68e2e5c4d267652212ac7 505 Gene3D G3DSA:3.40.1010.10 2 119 2.2E-37 T 18-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 SHALO_1527 53aaaa80b8d68e2e5c4d267652212ac7 505 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 4 239 2.0E-85 T 18-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 SHALO_1527 53aaaa80b8d68e2e5c4d267652212ac7 505 SUPERFAMILY SSF53790 1 254 4.32E-69 T 18-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 SHALO_1527 53aaaa80b8d68e2e5c4d267652212ac7 505 Gene3D G3DSA:3.40.50.10090 295 385 1.1E-13 T 18-10-2018 SHALO_1527 53aaaa80b8d68e2e5c4d267652212ac7 505 PIRSF PIRSF036426 1 255 1.6E-91 T 18-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 SHALO_2869 876cadc1c54f9cab90ba2d29a34c02d4 153 Gene3D G3DSA:3.40.250.10 48 130 2.2E-18 T 18-10-2018 IPR036873 Rhodanese-like domain superfamily SHALO_2869 876cadc1c54f9cab90ba2d29a34c02d4 153 Pfam PF00581 Rhodanese-like domain 50 127 2.8E-9 T 18-10-2018 IPR001763 Rhodanese-like domain SHALO_2869 876cadc1c54f9cab90ba2d29a34c02d4 153 SUPERFAMILY SSF52821 36 128 1.24E-21 T 18-10-2018 IPR036873 Rhodanese-like domain superfamily SHALO_2869 876cadc1c54f9cab90ba2d29a34c02d4 153 SMART SM00450 42 136 2.6E-10 T 18-10-2018 IPR001763 Rhodanese-like domain SHALO_1447 868239b01c57370c5ed5f1353ccdd765 185 SMART SM00278 107 126 0.23 T 18-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SHALO_1447 868239b01c57370c5ed5f1353ccdd765 185 SMART SM00278 72 91 84.0 T 18-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SHALO_1447 868239b01c57370c5ed5f1353ccdd765 185 Gene3D G3DSA:2.40.50.140 1 64 1.6E-12 T 18-10-2018 SHALO_1447 868239b01c57370c5ed5f1353ccdd765 185 SUPERFAMILY SSF46929 144 184 6.67E-5 T 18-10-2018 IPR036267 RuvA, C-terminal domain superfamily SHALO_1447 868239b01c57370c5ed5f1353ccdd765 185 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 184 4.2E-42 T 18-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 SHALO_1447 868239b01c57370c5ed5f1353ccdd765 185 Pfam PF07499 RuvA, C-terminal domain 146 185 1.1E-9 T 18-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 SHALO_1447 868239b01c57370c5ed5f1353ccdd765 185 Gene3D G3DSA:1.10.150.20 65 133 1.9E-22 T 18-10-2018 SHALO_1447 868239b01c57370c5ed5f1353ccdd765 185 SUPERFAMILY SSF47781 65 134 1.11E-17 T 18-10-2018 IPR010994 RuvA domain 2-like SHALO_1447 868239b01c57370c5ed5f1353ccdd765 185 SUPERFAMILY SSF50249 1 62 1.37E-7 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold SHALO_1447 868239b01c57370c5ed5f1353ccdd765 185 Gene3D G3DSA:1.10.8.10 140 184 9.3E-8 T 18-10-2018 SHALO_1447 868239b01c57370c5ed5f1353ccdd765 185 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 185 25.619 T 18-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 SHALO_1447 868239b01c57370c5ed5f1353ccdd765 185 Pfam PF14520 Helix-hairpin-helix domain 71 129 3.1E-17 T 18-10-2018 SHALO_1447 868239b01c57370c5ed5f1353ccdd765 185 Pfam PF01330 RuvA N terminal domain 1 61 1.5E-10 T 18-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 SHALO_0746 e8d4167afe99330b2bc48e368352442b 508 Gene3D G3DSA:2.40.50.140 2 148 1.2E-37 T 18-10-2018 SHALO_0746 e8d4167afe99330b2bc48e368352442b 508 Pfam PF01336 OB-fold nucleic acid binding domain 60 136 3.2E-14 T 18-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 SHALO_0746 e8d4167afe99330b2bc48e368352442b 508 SUPERFAMILY SSF50249 5 146 2.45E-33 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold SHALO_0746 e8d4167afe99330b2bc48e368352442b 508 Pfam PF00152 tRNA synthetases class II (D, K and N) 153 491 3.6E-80 T 18-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_0746 e8d4167afe99330b2bc48e368352442b 508 Gene3D G3DSA:3.30.930.10 149 507 4.6E-129 T 18-10-2018 SHALO_0746 e8d4167afe99330b2bc48e368352442b 508 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 10 496 42.318 T 18-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 SHALO_0746 e8d4167afe99330b2bc48e368352442b 508 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 5 493 2.5E-199 T 18-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 SHALO_0746 e8d4167afe99330b2bc48e368352442b 508 SUPERFAMILY SSF55681 153 492 6.17E-116 T 18-10-2018 SHALO_0746 e8d4167afe99330b2bc48e368352442b 508 PRINTS PR00982 Lysyl-tRNA synthetase signature 253 270 3.4E-38 T 18-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 SHALO_0746 e8d4167afe99330b2bc48e368352442b 508 PRINTS PR00982 Lysyl-tRNA synthetase signature 376 392 3.4E-38 T 18-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 SHALO_0746 e8d4167afe99330b2bc48e368352442b 508 PRINTS PR00982 Lysyl-tRNA synthetase signature 235 248 3.4E-38 T 18-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 SHALO_0746 e8d4167afe99330b2bc48e368352442b 508 PRINTS PR00982 Lysyl-tRNA synthetase signature 190 200 3.4E-38 T 18-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 SHALO_0746 e8d4167afe99330b2bc48e368352442b 508 PRINTS PR00982 Lysyl-tRNA synthetase signature 206 222 3.4E-38 T 18-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 SHALO_2330 8f9db1d262c018f3af7585294141812a 167 PIRSF PIRSF006160 1 162 3.8E-64 T 18-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SHALO_2330 8f9db1d262c018f3af7585294141812a 167 Gene3D G3DSA:3.30.1360.80 1 167 1.4E-65 T 18-10-2018 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SHALO_2330 8f9db1d262c018f3af7585294141812a 167 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 9 153 2.0E-65 T 18-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SHALO_2330 8f9db1d262c018f3af7585294141812a 167 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 154 1.0E-60 T 18-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SHALO_2330 8f9db1d262c018f3af7585294141812a 167 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 1.1E-47 T 18-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SHALO_2330 8f9db1d262c018f3af7585294141812a 167 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 1.1E-47 T 18-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SHALO_2330 8f9db1d262c018f3af7585294141812a 167 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 121 140 1.1E-47 T 18-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SHALO_2330 8f9db1d262c018f3af7585294141812a 167 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 1.1E-47 T 18-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SHALO_2330 8f9db1d262c018f3af7585294141812a 167 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 1.1E-47 T 18-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SHALO_2330 8f9db1d262c018f3af7585294141812a 167 SUPERFAMILY SSF63411 4 162 1.37E-64 T 18-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SHALO_2330 8f9db1d262c018f3af7585294141812a 167 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 159 34.294 T 18-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SHALO_2575 f1639632b70f635c46e17fcfa596d5ce 563 PRINTS PR00344 Bacterial sensor protein C-terminal signature 506 516 4.0E-11 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_2575 f1639632b70f635c46e17fcfa596d5ce 563 PRINTS PR00344 Bacterial sensor protein C-terminal signature 488 502 4.0E-11 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_2575 f1639632b70f635c46e17fcfa596d5ce 563 PRINTS PR00344 Bacterial sensor protein C-terminal signature 518 536 4.0E-11 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_2575 f1639632b70f635c46e17fcfa596d5ce 563 PRINTS PR00344 Bacterial sensor protein C-terminal signature 541 554 4.0E-11 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_2575 f1639632b70f635c46e17fcfa596d5ce 563 Pfam PF08448 PAS fold 180 287 1.0E-10 T 18-10-2018 IPR013656 PAS fold-4 SHALO_2575 f1639632b70f635c46e17fcfa596d5ce 563 Gene3D G3DSA:3.30.450.20 30 151 3.7E-17 T 18-10-2018 SHALO_2575 f1639632b70f635c46e17fcfa596d5ce 563 Pfam PF00512 His Kinase A (phospho-acceptor) domain 325 392 1.9E-11 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_2575 f1639632b70f635c46e17fcfa596d5ce 563 Gene3D G3DSA:3.30.565.10 390 556 7.8E-28 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_2575 f1639632b70f635c46e17fcfa596d5ce 563 Gene3D G3DSA:3.30.450.20 166 303 1.2E-15 T 18-10-2018 SHALO_2575 f1639632b70f635c46e17fcfa596d5ce 563 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 45 159 6.7E-12 T 18-10-2018 IPR000014 PAS domain SHALO_2575 f1639632b70f635c46e17fcfa596d5ce 563 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 176 290 2.7E-10 T 18-10-2018 IPR000014 PAS domain SHALO_2575 f1639632b70f635c46e17fcfa596d5ce 563 SUPERFAMILY SSF47384 319 392 2.16E-9 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SHALO_2575 f1639632b70f635c46e17fcfa596d5ce 563 Pfam PF13426 PAS domain 54 151 1.2E-12 T 18-10-2018 IPR000014 PAS domain SHALO_2575 f1639632b70f635c46e17fcfa596d5ce 563 SUPERFAMILY SSF55874 395 556 5.63E-24 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_2575 f1639632b70f635c46e17fcfa596d5ce 563 SUPERFAMILY SSF55785 45 151 5.83E-17 T 18-10-2018 IPR035965 PAS domain superfamily SHALO_2575 f1639632b70f635c46e17fcfa596d5ce 563 SMART SM00388 323 396 6.3E-9 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_2575 f1639632b70f635c46e17fcfa596d5ce 563 Gene3D G3DSA:1.10.287.130 310 389 3.1E-17 T 18-10-2018 SHALO_2575 f1639632b70f635c46e17fcfa596d5ce 563 SUPERFAMILY SSF55785 167 284 3.14E-14 T 18-10-2018 IPR035965 PAS domain superfamily SHALO_2575 f1639632b70f635c46e17fcfa596d5ce 563 SMART SM00091 41 108 0.0079 T 18-10-2018 IPR000014 PAS domain SHALO_2575 f1639632b70f635c46e17fcfa596d5ce 563 SMART SM00091 173 239 1.6E-8 T 18-10-2018 IPR000014 PAS domain SHALO_2575 f1639632b70f635c46e17fcfa596d5ce 563 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 451 556 3.4E-13 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_2575 f1639632b70f635c46e17fcfa596d5ce 563 SMART SM00387 446 557 3.2E-18 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_2707 e17658a886483545a6080a9e62d93bf2 409 SUPERFAMILY SSF55874 280 405 1.9E-12 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_2707 e17658a886483545a6080a9e62d93bf2 409 Gene3D G3DSA:3.30.565.10 274 409 6.8E-8 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_2707 e17658a886483545a6080a9e62d93bf2 409 Gene3D G3DSA:1.10.287.130 157 272 4.3E-16 T 18-10-2018 SHALO_2707 e17658a886483545a6080a9e62d93bf2 409 SUPERFAMILY SSF47384 194 268 7.46E-7 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SHALO_2707 e17658a886483545a6080a9e62d93bf2 409 SMART SM00388 211 269 3.9E-5 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_2707 e17658a886483545a6080a9e62d93bf2 409 SUPERFAMILY SSF158472 161 207 3.53E-5 T 18-10-2018 SHALO_0868 99854c1c2076f51a4c44a705276eea12 165 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 2 155 3.9E-56 T 18-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 SHALO_0868 99854c1c2076f51a4c44a705276eea12 165 Pfam PF08282 haloacid dehalogenase-like hydrolase 77 136 3.5E-9 T 18-10-2018 SHALO_0868 99854c1c2076f51a4c44a705276eea12 165 SUPERFAMILY SSF56784 1 151 8.14E-35 T 18-10-2018 IPR036412 HAD-like superfamily SHALO_0868 99854c1c2076f51a4c44a705276eea12 165 Gene3D G3DSA:3.40.50.1000 1 163 1.7E-47 T 18-10-2018 IPR023214 HAD superfamily SHALO_0868 99854c1c2076f51a4c44a705276eea12 165 PIRSF PIRSF006118 1 165 4.0E-62 T 18-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 SHALO_1414 0b54029f9f514897c8e64087fd67b6a9 113 PIRSF PIRSF004761 1 113 5.0E-34 T 18-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 SHALO_1414 0b54029f9f514897c8e64087fd67b6a9 113 TIGRFAM TIGR00100 hypA: hydrogenase nickel insertion protein HypA 1 113 8.3E-29 T 18-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 SHALO_1414 0b54029f9f514897c8e64087fd67b6a9 113 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 1 112 1.1E-30 T 18-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 SHALO_1414 0b54029f9f514897c8e64087fd67b6a9 113 Hamap MF_00213 Hydrogenase maturation factor HypA [hypA]. 1 113 20.252 T 18-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 SHALO_1414 0b54029f9f514897c8e64087fd67b6a9 113 Gene3D G3DSA:3.30.2320.80 1 113 2.7E-34 T 18-10-2018 SHALO_0534 fedab4cd08ce1e21ebf099da0f91df69 83 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 9 67 6.7E-8 T 18-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM SHALO_0534 fedab4cd08ce1e21ebf099da0f91df69 83 SUPERFAMILY SSF143120 9 59 4.58E-6 T 18-10-2018 IPR036165 YefM-like superfamily SHALO_2857 699adf606dfaf7bf31100132e174a250 760 Gene3D G3DSA:3.90.480.10 52 369 1.2E-81 T 18-10-2018 SHALO_2857 699adf606dfaf7bf31100132e174a250 760 Gene3D G3DSA:3.30.413.10 390 564 3.3E-30 T 18-10-2018 SHALO_2857 699adf606dfaf7bf31100132e174a250 760 SUPERFAMILY SSF55124 13 116 9.0E-25 T 18-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 SHALO_2857 699adf606dfaf7bf31100132e174a250 760 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 440 456 - T 18-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 SHALO_2857 699adf606dfaf7bf31100132e174a250 760 Pfam PF01206 Sulfurtransferase TusA 693 759 1.0E-16 T 18-10-2018 IPR001455 TusA-like domain SHALO_2857 699adf606dfaf7bf31100132e174a250 760 SUPERFAMILY SSF64307 687 759 1.31E-17 T 18-10-2018 IPR036868 TusA-like domain superfamily SHALO_2857 699adf606dfaf7bf31100132e174a250 760 SUPERFAMILY SSF56014 391 553 2.75E-26 T 18-10-2018 SHALO_2857 699adf606dfaf7bf31100132e174a250 760 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 394 533 6.9E-10 T 18-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 SHALO_2857 699adf606dfaf7bf31100132e174a250 760 Gene3D G3DSA:3.30.413.10 119 304 1.2E-81 T 18-10-2018 SHALO_2857 699adf606dfaf7bf31100132e174a250 760 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 120 270 8.3E-33 T 18-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 SHALO_2857 699adf606dfaf7bf31100132e174a250 760 SUPERFAMILY SSF55124 251 402 9.0E-13 T 18-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 SHALO_2857 699adf606dfaf7bf31100132e174a250 760 Gene3D G3DSA:3.30.110.40 691 759 1.4E-17 T 18-10-2018 IPR036868 TusA-like domain superfamily SHALO_2857 699adf606dfaf7bf31100132e174a250 760 PRINTS PR00397 Sirohaem Fe-binding site signature 440 458 1.1E-5 T 18-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 SHALO_2857 699adf606dfaf7bf31100132e174a250 760 PRINTS PR00397 Sirohaem Fe-binding site signature 391 409 1.1E-5 T 18-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 SHALO_2857 699adf606dfaf7bf31100132e174a250 760 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 314 378 3.4E-7 T 18-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 SHALO_2857 699adf606dfaf7bf31100132e174a250 760 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 45 109 1.3E-15 T 18-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 SHALO_2857 699adf606dfaf7bf31100132e174a250 760 SUPERFAMILY SSF56014 120 276 3.14E-40 T 18-10-2018 SHALO_0825 b37195377f585c7547912e5d01d242a5 414 SMART SM00052 174 410 1.2E-57 T 18-10-2018 IPR001633 EAL domain SHALO_0825 b37195377f585c7547912e5d01d242a5 414 SMART SM00267 2 158 1.2E-5 T 18-10-2018 IPR000160 GGDEF domain SHALO_0825 b37195377f585c7547912e5d01d242a5 414 SUPERFAMILY SSF141868 180 411 1.96E-62 T 18-10-2018 IPR035919 EAL domain superfamily SHALO_0825 b37195377f585c7547912e5d01d242a5 414 Pfam PF00563 EAL domain 180 405 4.3E-55 T 18-10-2018 IPR001633 EAL domain SHALO_0825 b37195377f585c7547912e5d01d242a5 414 Pfam PF00990 Diguanylate cyclase, GGDEF domain 16 153 3.0E-10 T 18-10-2018 IPR000160 GGDEF domain SHALO_0825 b37195377f585c7547912e5d01d242a5 414 Gene3D G3DSA:3.20.20.450 173 413 5.1E-65 T 18-10-2018 IPR035919 EAL domain superfamily SHALO_0825 b37195377f585c7547912e5d01d242a5 414 SUPERFAMILY SSF55073 17 157 2.67E-18 T 18-10-2018 IPR029787 Nucleotide cyclase SHALO_0825 b37195377f585c7547912e5d01d242a5 414 Gene3D G3DSA:3.30.70.270 10 169 9.0E-19 T 18-10-2018 SHALO_0992 10c2514afbbefdea597ab20952295e53 483 SMART SM00387 390 483 8.8E-4 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_0992 10c2514afbbefdea597ab20952295e53 483 SUPERFAMILY SSF55874 357 478 4.19E-19 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_0992 10c2514afbbefdea597ab20952295e53 483 Gene3D G3DSA:3.30.565.10 354 482 1.1E-25 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_0992 10c2514afbbefdea597ab20952295e53 483 Pfam PF07730 Histidine kinase 287 351 2.3E-12 T 18-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 SHALO_0992 10c2514afbbefdea597ab20952295e53 483 Pfam PF13581 Histidine kinase-like ATPase domain 360 479 8.2E-7 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_0029 06075fe7813c27ed5691eb3acf00e5e6 573 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 454 555 6.9E-9 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_0029 06075fe7813c27ed5691eb3acf00e5e6 573 Gene3D G3DSA:1.10.287.130 323 406 6.7E-9 T 18-10-2018 SHALO_0029 06075fe7813c27ed5691eb3acf00e5e6 573 SMART SM00387 451 568 1.7E-9 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_0029 06075fe7813c27ed5691eb3acf00e5e6 573 Gene3D G3DSA:3.30.450.20 138 194 2.1E-16 T 18-10-2018 SHALO_0029 06075fe7813c27ed5691eb3acf00e5e6 573 Gene3D G3DSA:3.30.450.20 195 286 2.1E-16 T 18-10-2018 SHALO_0029 06075fe7813c27ed5691eb3acf00e5e6 573 Pfam PF02743 Cache domain 66 276 3.4E-17 T 18-10-2018 IPR033479 Double Cache domain 1 SHALO_0029 06075fe7813c27ed5691eb3acf00e5e6 573 SUPERFAMILY SSF55874 407 564 7.2E-18 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_0029 06075fe7813c27ed5691eb3acf00e5e6 573 Gene3D G3DSA:3.30.565.10 409 567 7.3E-21 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_1000 5552039060d0a0f5dbd9d98f07b90ce3 688 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 416 607 3.0E-28 T 18-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit SHALO_1000 5552039060d0a0f5dbd9d98f07b90ce3 688 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 130 396 6.0E-62 T 18-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit SHALO_1000 5552039060d0a0f5dbd9d98f07b90ce3 688 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 31 687 3.0E-216 T 18-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ SHALO_1585 d74eb91e0a555530ace4cf997bab34a3 421 Gene3D G3DSA:1.25.40.10 267 414 1.7E-7 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SHALO_1585 d74eb91e0a555530ace4cf997bab34a3 421 SUPERFAMILY SSF48452 37 194 4.93E-9 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SHALO_1585 d74eb91e0a555530ace4cf997bab34a3 421 SUPERFAMILY SSF48452 272 394 4.93E-9 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SHALO_1585 d74eb91e0a555530ace4cf997bab34a3 421 Gene3D G3DSA:1.25.40.10 18 262 1.0E-11 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SHALO_2582 b8a57245b6857f614d7ce1b487e761d8 271 Gene3D G3DSA:3.40.190.10 119 221 6.0E-55 T 18-10-2018 SHALO_2582 b8a57245b6857f614d7ce1b487e761d8 271 SUPERFAMILY SSF53850 37 271 1.59E-42 T 18-10-2018 SHALO_2582 b8a57245b6857f614d7ce1b487e761d8 271 Gene3D G3DSA:3.40.190.10 55 269 6.0E-55 T 18-10-2018 SHALO_2582 b8a57245b6857f614d7ce1b487e761d8 271 Pfam PF03180 NLPA lipoprotein 55 271 3.7E-45 T 18-10-2018 IPR004872 Lipoprotein NlpA family SHALO_1690 3d44b2f876bad7c69c008972d8b64314 175 Pfam PF00994 Probable molybdopterin binding domain 6 149 1.0E-31 T 18-10-2018 IPR001453 MoaB/Mog domain SHALO_1690 3d44b2f876bad7c69c008972d8b64314 175 SMART SM00852 6 152 2.6E-27 T 18-10-2018 IPR001453 MoaB/Mog domain SHALO_1690 3d44b2f876bad7c69c008972d8b64314 175 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 68 81 - T 18-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 SHALO_1690 3d44b2f876bad7c69c008972d8b64314 175 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 3 146 5.0E-40 T 18-10-2018 IPR001453 MoaB/Mog domain SHALO_1690 3d44b2f876bad7c69c008972d8b64314 175 SUPERFAMILY SSF53218 3 164 2.36E-46 T 18-10-2018 IPR036425 MoaB/Mog-like domain superfamily SHALO_1690 3d44b2f876bad7c69c008972d8b64314 175 Gene3D G3DSA:3.40.980.10 1 175 6.2E-64 T 18-10-2018 IPR036425 MoaB/Mog-like domain superfamily SHALO_0630 08d95dda91dc98106c22baf397c2f04d 86 TIGRFAM TIGR02116 toxin_Txe_YoeB: addiction module toxin, Txe/YoeB family 5 86 5.0E-30 T 18-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 SHALO_0630 08d95dda91dc98106c22baf397c2f04d 86 SUPERFAMILY SSF143011 1 85 2.22E-24 T 18-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily SHALO_0630 08d95dda91dc98106c22baf397c2f04d 86 Pfam PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system 5 86 1.9E-34 T 18-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 SHALO_0630 08d95dda91dc98106c22baf397c2f04d 86 Gene3D G3DSA:3.30.2310.20 1 86 2.0E-33 T 18-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily SHALO_0689 dde505e496e298b4fb1bc0f1635e58d2 309 Pfam PF13432 Tetratricopeptide repeat 203 259 3.6E-7 T 18-10-2018 SHALO_0689 dde505e496e298b4fb1bc0f1635e58d2 309 Pfam PF13174 Tetratricopeptide repeat 272 302 1.3E-4 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_0689 dde505e496e298b4fb1bc0f1635e58d2 309 Gene3D G3DSA:1.25.40.10 200 309 5.4E-19 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SHALO_0689 dde505e496e298b4fb1bc0f1635e58d2 309 SUPERFAMILY SSF48452 192 306 2.4E-14 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SHALO_0689 dde505e496e298b4fb1bc0f1635e58d2 309 SMART SM00028 198 231 370.0 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_0689 dde505e496e298b4fb1bc0f1635e58d2 309 SMART SM00028 269 302 140.0 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_0689 dde505e496e298b4fb1bc0f1635e58d2 309 SMART SM00028 232 265 0.35 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_0614 0d7fbfee42297dd7d8cf26d277164970 148 PRINTS PR01438 Universal stress protein signature 2 20 4.9E-17 T 18-10-2018 IPR006015 Universal stress protein A SHALO_0614 0d7fbfee42297dd7d8cf26d277164970 148 PRINTS PR01438 Universal stress protein signature 108 120 4.9E-17 T 18-10-2018 IPR006015 Universal stress protein A SHALO_0614 0d7fbfee42297dd7d8cf26d277164970 148 PRINTS PR01438 Universal stress protein signature 126 148 4.9E-17 T 18-10-2018 IPR006015 Universal stress protein A SHALO_0614 0d7fbfee42297dd7d8cf26d277164970 148 Gene3D G3DSA:3.40.50.620 1 146 6.2E-35 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_0614 0d7fbfee42297dd7d8cf26d277164970 148 SUPERFAMILY SSF52402 2 148 3.52E-33 T 18-10-2018 SHALO_0614 0d7fbfee42297dd7d8cf26d277164970 148 Pfam PF00582 Universal stress protein family 1 147 1.9E-30 T 18-10-2018 IPR006016 UspA SHALO_0614 0d7fbfee42297dd7d8cf26d277164970 148 PIRSF PIRSF006276 1 148 5.0E-19 T 18-10-2018 IPR006015 Universal stress protein A SHALO_0497 eee3c2f1ae94c01bcda0462f3be77c46 559 SUPERFAMILY SSF55874 397 549 1.57E-32 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_0497 eee3c2f1ae94c01bcda0462f3be77c46 559 SMART SM00387 439 551 4.6E-20 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_0497 eee3c2f1ae94c01bcda0462f3be77c46 559 SUPERFAMILY SSF47384 324 397 4.71E-5 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SHALO_0497 eee3c2f1ae94c01bcda0462f3be77c46 559 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 441 548 2.8E-15 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_0497 eee3c2f1ae94c01bcda0462f3be77c46 559 PRINTS PR00344 Bacterial sensor protein C-terminal signature 511 529 1.4E-13 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_0497 eee3c2f1ae94c01bcda0462f3be77c46 559 PRINTS PR00344 Bacterial sensor protein C-terminal signature 480 494 1.4E-13 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_0497 eee3c2f1ae94c01bcda0462f3be77c46 559 PRINTS PR00344 Bacterial sensor protein C-terminal signature 498 508 1.4E-13 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_0497 eee3c2f1ae94c01bcda0462f3be77c46 559 PRINTS PR00344 Bacterial sensor protein C-terminal signature 535 548 1.4E-13 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_0497 eee3c2f1ae94c01bcda0462f3be77c46 559 Gene3D G3DSA:3.30.565.10 399 550 4.2E-36 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_0497 eee3c2f1ae94c01bcda0462f3be77c46 559 Gene3D G3DSA:1.10.287.130 313 398 2.6E-9 T 18-10-2018 SHALO_2258 ce6f94c3758be6a3bb1ab8afda3fe12a 224 SUPERFAMILY SSF64438 2 224 1.83E-70 T 18-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic SHALO_2258 ce6f94c3758be6a3bb1ab8afda3fe12a 224 Gene3D G3DSA:3.60.140.10 1 224 4.6E-77 T 18-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily SHALO_2258 ce6f94c3758be6a3bb1ab8afda3fe12a 224 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 6 222 2.5E-70 T 18-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase SHALO_2258 ce6f94c3758be6a3bb1ab8afda3fe12a 224 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 11 223 1.9E-52 T 18-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase SHALO_0790 7886736e518ae53959fc7b412cf7bcb4 450 PIRSF PIRSF006066 1 450 7.2E-66 T 18-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 SHALO_0790 7886736e518ae53959fc7b412cf7bcb4 450 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 58 442 5.7E-101 T 18-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 SHALO_0790 7886736e518ae53959fc7b412cf7bcb4 450 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 8 442 3.7E-94 T 18-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit SHALO_1644 d8e97dc4e2630661dfb28756db027d09 373 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 3 371 3.6E-157 T 18-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 SHALO_1644 d8e97dc4e2630661dfb28756db027d09 373 Pfam PF01702 Queuine tRNA-ribosyltransferase 128 367 1.7E-88 T 18-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 SHALO_1644 d8e97dc4e2630661dfb28756db027d09 373 SUPERFAMILY SSF51713 1 370 4.58E-147 T 18-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 SHALO_1644 d8e97dc4e2630661dfb28756db027d09 373 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 370 53.093 T 18-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 SHALO_1644 d8e97dc4e2630661dfb28756db027d09 373 Gene3D G3DSA:3.20.20.105 1 373 1.3E-161 T 18-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 SHALO_1644 d8e97dc4e2630661dfb28756db027d09 373 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 3 370 7.7E-150 T 18-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 SHALO_1571 f6b2112a21c7e865020e362fa70263b9 248 Pfam PF00005 ABC transporter 23 171 3.8E-38 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_1571 f6b2112a21c7e865020e362fa70263b9 248 Gene3D G3DSA:3.40.50.300 4 248 6.9E-82 T 18-10-2018 SHALO_1571 f6b2112a21c7e865020e362fa70263b9 248 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_1571 f6b2112a21c7e865020e362fa70263b9 248 SMART SM00382 32 227 2.1E-15 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_1571 f6b2112a21c7e865020e362fa70263b9 248 PIRSF PIRSF039085 4 247 1.4E-111 T 18-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 SHALO_1571 f6b2112a21c7e865020e362fa70263b9 248 SUPERFAMILY SSF52540 7 240 2.48E-82 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0829 54a07cb7e0bb4d9360997d0a1664a274 1016 Gene3D G3DSA:3.30.70.1440 643 840 4.9E-277 T 18-10-2018 SHALO_0829 54a07cb7e0bb4d9360997d0a1664a274 1016 SUPERFAMILY SSF82693 539 645 4.19E-21 T 18-10-2018 SHALO_0829 54a07cb7e0bb4d9360997d0a1664a274 1016 SUPERFAMILY SSF82714 158 249 5.23E-22 T 18-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SHALO_0829 54a07cb7e0bb4d9360997d0a1664a274 1016 Gene3D G3DSA:3.30.70.1430 42 791 4.9E-277 T 18-10-2018 SHALO_0829 54a07cb7e0bb4d9360997d0a1664a274 1016 Pfam PF00873 AcrB/AcrD/AcrF family 42 1000 8.8E-304 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SHALO_0829 54a07cb7e0bb4d9360997d0a1664a274 1016 Gene3D G3DSA:1.20.1640.10 309 486 4.9E-277 T 18-10-2018 SHALO_0829 54a07cb7e0bb4d9360997d0a1664a274 1016 SUPERFAMILY SSF82693 111 306 1.38E-23 T 18-10-2018 SHALO_0829 54a07cb7e0bb4d9360997d0a1664a274 1016 PRINTS PR00702 Acriflavin resistance protein family signature 339 360 3.4E-71 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SHALO_0829 54a07cb7e0bb4d9360997d0a1664a274 1016 PRINTS PR00702 Acriflavin resistance protein family signature 422 445 3.4E-71 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SHALO_0829 54a07cb7e0bb4d9360997d0a1664a274 1016 PRINTS PR00702 Acriflavin resistance protein family signature 595 609 3.4E-71 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SHALO_0829 54a07cb7e0bb4d9360997d0a1664a274 1016 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 3.4E-71 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SHALO_0829 54a07cb7e0bb4d9360997d0a1664a274 1016 PRINTS PR00702 Acriflavin resistance protein family signature 526 543 3.4E-71 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SHALO_0829 54a07cb7e0bb4d9360997d0a1664a274 1016 PRINTS PR00702 Acriflavin resistance protein family signature 312 335 3.4E-71 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SHALO_0829 54a07cb7e0bb4d9360997d0a1664a274 1016 PRINTS PR00702 Acriflavin resistance protein family signature 367 391 3.4E-71 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SHALO_0829 54a07cb7e0bb4d9360997d0a1664a274 1016 Gene3D G3DSA:3.30.70.1320 108 308 4.9E-277 T 18-10-2018 SHALO_0829 54a07cb7e0bb4d9360997d0a1664a274 1016 Gene3D G3DSA:1.20.1640.10 487 997 4.9E-277 T 18-10-2018 SHALO_0829 54a07cb7e0bb4d9360997d0a1664a274 1016 SUPERFAMILY SSF82714 696 780 2.35E-19 T 18-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SHALO_0829 54a07cb7e0bb4d9360997d0a1664a274 1016 SUPERFAMILY SSF82866 272 475 4.58E-48 T 18-10-2018 SHALO_0829 54a07cb7e0bb4d9360997d0a1664a274 1016 SUPERFAMILY SSF82693 42 106 4.97E-11 T 18-10-2018 SHALO_0829 54a07cb7e0bb4d9360997d0a1664a274 1016 Gene3D G3DSA:3.30.2090.10 154 251 4.9E-277 T 18-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SHALO_0829 54a07cb7e0bb4d9360997d0a1664a274 1016 Gene3D G3DSA:3.30.2090.10 695 783 4.9E-277 T 18-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SHALO_0829 54a07cb7e0bb4d9360997d0a1664a274 1016 SUPERFAMILY SSF82866 779 1005 2.75E-44 T 18-10-2018 SHALO_0829 54a07cb7e0bb4d9360997d0a1664a274 1016 Gene3D G3DSA:3.30.70.1430 541 642 4.9E-277 T 18-10-2018 SHALO_0829 54a07cb7e0bb4d9360997d0a1664a274 1016 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 42 1005 0.0 T 18-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 SHALO_0800 b2e1a6f1e24e11e5fd8aed196fccb736 427 Gene3D G3DSA:3.65.10.10 23 231 2.8E-125 T 18-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 SHALO_0800 b2e1a6f1e24e11e5fd8aed196fccb736 427 ProSitePatterns PS00885 EPSP synthase signature 2. 339 357 - T 18-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 SHALO_0800 b2e1a6f1e24e11e5fd8aed196fccb736 427 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 18 418 1.1E-109 T 18-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 SHALO_0800 b2e1a6f1e24e11e5fd8aed196fccb736 427 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 11 425 30.449 T 18-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 SHALO_0800 b2e1a6f1e24e11e5fd8aed196fccb736 427 SUPERFAMILY SSF55205 19 423 4.09E-110 T 18-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 SHALO_0800 b2e1a6f1e24e11e5fd8aed196fccb736 427 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 19 423 1.1E-119 T 18-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 SHALO_0800 b2e1a6f1e24e11e5fd8aed196fccb736 427 Gene3D G3DSA:3.65.10.10 19 418 2.8E-125 T 18-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 SHALO_0800 b2e1a6f1e24e11e5fd8aed196fccb736 427 ProSitePatterns PS00104 EPSP synthase signature 1. 88 102 - T 18-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 SHALO_0800 b2e1a6f1e24e11e5fd8aed196fccb736 427 PIRSF PIRSF000505 1 427 2.1E-103 T 18-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 SHALO_1061 e4bfafe2e61abd45896f204d90946c80 661 SUPERFAMILY SSF56784 359 654 1.1E-55 T 18-10-2018 IPR036412 HAD-like superfamily SHALO_1061 e4bfafe2e61abd45896f204d90946c80 661 Pfam PF00122 E1-E2 ATPase 162 340 7.5E-44 T 18-10-2018 SHALO_1061 e4bfafe2e61abd45896f204d90946c80 661 Gene3D G3DSA:3.40.50.1000 342 607 1.7E-77 T 18-10-2018 IPR023214 HAD superfamily SHALO_1061 e4bfafe2e61abd45896f204d90946c80 661 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 110 658 2.6E-153 T 18-10-2018 SHALO_1061 e4bfafe2e61abd45896f204d90946c80 661 Gene3D G3DSA:3.40.1110.10 372 482 1.7E-77 T 18-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 SHALO_1061 e4bfafe2e61abd45896f204d90946c80 661 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 110 656 4.8E-166 T 18-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 SHALO_1061 e4bfafe2e61abd45896f204d90946c80 661 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 131 634 6.4E-67 T 18-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 SHALO_1061 e4bfafe2e61abd45896f204d90946c80 661 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 361 375 3.9E-24 T 18-10-2018 SHALO_1061 e4bfafe2e61abd45896f204d90946c80 661 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 554 573 3.9E-24 T 18-10-2018 SHALO_1061 e4bfafe2e61abd45896f204d90946c80 661 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 578 590 3.9E-24 T 18-10-2018 SHALO_1061 e4bfafe2e61abd45896f204d90946c80 661 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 209 223 3.9E-24 T 18-10-2018 SHALO_1061 e4bfafe2e61abd45896f204d90946c80 661 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 475 486 3.9E-24 T 18-10-2018 SHALO_1061 e4bfafe2e61abd45896f204d90946c80 661 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 498 508 3.9E-24 T 18-10-2018 SHALO_1061 e4bfafe2e61abd45896f204d90946c80 661 Gene3D G3DSA:2.70.150.20 148 263 5.0E-30 T 18-10-2018 SHALO_1061 e4bfafe2e61abd45896f204d90946c80 661 SUPERFAMILY SSF81665 110 653 4.32E-10 T 18-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 SHALO_1061 e4bfafe2e61abd45896f204d90946c80 661 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 363 369 - T 18-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 SHALO_1061 e4bfafe2e61abd45896f204d90946c80 661 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 554 570 1.9E-5 T 18-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 SHALO_1061 e4bfafe2e61abd45896f204d90946c80 661 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 586 611 1.9E-5 T 18-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 SHALO_1061 e4bfafe2e61abd45896f204d90946c80 661 SUPERFAMILY SSF81653 172 259 7.45E-21 T 18-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 SHALO_1061 e4bfafe2e61abd45896f204d90946c80 661 Pfam PF00702 haloacid dehalogenase-like hydrolase 357 568 7.2E-33 T 18-10-2018 SHALO_0602 356336eb223a4286e7c204520c4b93f5 71 Pfam PF13275 S4 domain 3 66 5.4E-23 T 18-10-2018 SHALO_0602 356336eb223a4286e7c204520c4b93f5 71 Gene3D G3DSA:3.10.290.10 1 67 2.1E-23 T 18-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 SHALO_0602 356336eb223a4286e7c204520c4b93f5 71 SUPERFAMILY SSF55174 2 66 1.7E-16 T 18-10-2018 SHALO_2770 594d1fb9ad1acfa3acc8456dadefe9fb 404 Gene3D G3DSA:3.40.980.10 173 326 8.6E-95 T 18-10-2018 IPR036425 MoaB/Mog-like domain superfamily SHALO_2770 594d1fb9ad1acfa3acc8456dadefe9fb 404 SMART SM00852 178 317 7.7E-26 T 18-10-2018 IPR001453 MoaB/Mog domain SHALO_2770 594d1fb9ad1acfa3acc8456dadefe9fb 404 SUPERFAMILY SSF63882 5 172 1.3E-40 T 18-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 SHALO_2770 594d1fb9ad1acfa3acc8456dadefe9fb 404 Pfam PF03453 MoeA N-terminal region (domain I and II) 7 164 2.8E-31 T 18-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 SHALO_2770 594d1fb9ad1acfa3acc8456dadefe9fb 404 Gene3D G3DSA:3.90.105.10 26 172 8.6E-95 T 18-10-2018 SHALO_2770 594d1fb9ad1acfa3acc8456dadefe9fb 404 SUPERFAMILY SSF53218 174 318 4.32E-33 T 18-10-2018 IPR036425 MoaB/Mog-like domain superfamily SHALO_2770 594d1fb9ad1acfa3acc8456dadefe9fb 404 Pfam PF00994 Probable molybdopterin binding domain 178 316 8.7E-17 T 18-10-2018 IPR001453 MoaB/Mog domain SHALO_2770 594d1fb9ad1acfa3acc8456dadefe9fb 404 Gene3D G3DSA:2.40.340.10 327 397 8.6E-95 T 18-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 SHALO_2770 594d1fb9ad1acfa3acc8456dadefe9fb 404 Gene3D G3DSA:2.170.190.11 49 139 8.6E-95 T 18-10-2018 SHALO_2770 594d1fb9ad1acfa3acc8456dadefe9fb 404 SUPERFAMILY SSF63867 326 403 4.71E-9 T 18-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 SHALO_0360 780360b6587f32ab21b2ecc61d37b91c 98 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 18 91 1.9E-10 T 18-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_0360 780360b6587f32ab21b2ecc61d37b91c 98 Gene3D G3DSA:1.10.760.10 19 96 5.3E-15 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_0360 780360b6587f32ab21b2ecc61d37b91c 98 SUPERFAMILY SSF46626 6 96 1.41E-14 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_0163 0c55d83510c82be7c5e1361656c6cc7e 335 Hamap MF_00219 Dihydroorotase [pyrC]. 1 332 42.402 T 18-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 SHALO_0163 0c55d83510c82be7c5e1361656c6cc7e 335 ProSitePatterns PS00483 Dihydroorotase signature 2. 238 249 - T 18-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 SHALO_0163 0c55d83510c82be7c5e1361656c6cc7e 335 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 4 332 7.5E-114 T 18-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 SHALO_0163 0c55d83510c82be7c5e1361656c6cc7e 335 Gene3D G3DSA:3.20.20.140 1 333 2.0E-89 T 18-10-2018 SHALO_0163 0c55d83510c82be7c5e1361656c6cc7e 335 PIRSF PIRSF001237 1 334 2.0E-115 T 18-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 SHALO_0163 0c55d83510c82be7c5e1361656c6cc7e 335 Pfam PF01979 Amidohydrolase family 10 258 1.1E-6 T 18-10-2018 IPR006680 Amidohydrolase-related GO:0016787 SHALO_0163 0c55d83510c82be7c5e1361656c6cc7e 335 SUPERFAMILY SSF51556 3 331 5.96E-103 T 18-10-2018 IPR032466 Metal-dependent hydrolase SHALO_0657 f3eb602195554ac21355b2f652b48232 436 Pfam PF01225 Mur ligase family, catalytic domain 3 99 3.4E-20 T 18-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 SHALO_0657 f3eb602195554ac21355b2f652b48232 436 Pfam PF08245 Mur ligase middle domain 106 216 1.6E-8 T 18-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 SHALO_0657 f3eb602195554ac21355b2f652b48232 436 Gene3D G3DSA:3.90.190.20 287 435 7.4E-32 T 18-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 SHALO_0657 f3eb602195554ac21355b2f652b48232 436 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 3 430 1.8E-111 T 18-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 SHALO_0657 f3eb602195554ac21355b2f652b48232 436 Gene3D G3DSA:3.40.1190.10 90 286 6.6E-35 T 18-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 SHALO_0657 f3eb602195554ac21355b2f652b48232 436 SUPERFAMILY SSF51984 2 88 9.42E-26 T 18-10-2018 SHALO_0657 f3eb602195554ac21355b2f652b48232 436 SUPERFAMILY SSF53623 88 288 1.24E-36 T 18-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 SHALO_0657 f3eb602195554ac21355b2f652b48232 436 SUPERFAMILY SSF53244 289 433 1.01E-26 T 18-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 SHALO_0657 f3eb602195554ac21355b2f652b48232 436 Gene3D G3DSA:3.40.50.720 3 88 1.6E-28 T 18-10-2018 SHALO_0657 f3eb602195554ac21355b2f652b48232 436 Pfam PF02875 Mur ligase family, glutamate ligase domain 291 375 2.1E-15 T 18-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 SHALO_0503 45f6f8d6a62ba52d234f635132622ef2 164 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 117 128 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_0503 45f6f8d6a62ba52d234f635132622ef2 164 SUPERFAMILY SSF54862 53 161 1.76E-20 T 18-10-2018 SHALO_0503 45f6f8d6a62ba52d234f635132622ef2 164 Gene3D G3DSA:3.30.70.3270 48 164 4.5E-33 T 18-10-2018 SHALO_0503 45f6f8d6a62ba52d234f635132622ef2 164 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 16 164 27.414 T 18-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0503 45f6f8d6a62ba52d234f635132622ef2 164 Pfam PF12838 4Fe-4S dicluster domain 75 131 1.3E-8 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_0974 8742592e75e7b72fec723a443ca745f4 416 SUPERFAMILY SSF81648 241 389 1.83E-35 T 18-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 SHALO_0974 8742592e75e7b72fec723a443ca745f4 416 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 287 396 2.4E-28 T 18-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 SHALO_0974 8742592e75e7b72fec723a443ca745f4 416 Gene3D G3DSA:1.20.810.10 2 416 4.0E-128 T 18-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 SHALO_0974 8742592e75e7b72fec723a443ca745f4 416 Pfam PF00033 Cytochrome b/b6/petB 29 215 3.7E-58 T 18-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 SHALO_0974 8742592e75e7b72fec723a443ca745f4 416 SUPERFAMILY SSF81342 12 289 2.22E-80 T 18-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 SHALO_0198 33a62c29380bf20a79030e8899bceb46 298 Gene3D G3DSA:3.40.50.300 7 272 2.9E-70 T 18-10-2018 SHALO_0198 33a62c29380bf20a79030e8899bceb46 298 SUPERFAMILY SSF52540 2 226 4.03E-8 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0198 33a62c29380bf20a79030e8899bceb46 298 Gene3D G3DSA:1.10.20.140 110 179 2.9E-70 T 18-10-2018 SHALO_0198 33a62c29380bf20a79030e8899bceb46 298 Pfam PF01715 IPP transferase 37 275 1.9E-55 T 18-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 SHALO_0198 33a62c29380bf20a79030e8899bceb46 298 SUPERFAMILY SSF52540 4 134 1.66E-15 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0198 33a62c29380bf20a79030e8899bceb46 298 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 3 297 22.037 T 18-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 SHALO_0198 33a62c29380bf20a79030e8899bceb46 298 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 4 276 1.7E-74 T 18-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 SHALO_0401 978ab022201b5b8ea2df85d4ecc6e0d9 342 Gene3D G3DSA:3.40.50.720 6 334 3.2E-133 T 18-10-2018 SHALO_0401 978ab022201b5b8ea2df85d4ecc6e0d9 342 SUPERFAMILY SSF51735 3 159 2.55E-50 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_0401 978ab022201b5b8ea2df85d4ecc6e0d9 342 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 5 338 1.2E-137 T 18-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 SHALO_0401 978ab022201b5b8ea2df85d4ecc6e0d9 342 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 142 322 3.5E-60 T 18-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 SHALO_0401 978ab022201b5b8ea2df85d4ecc6e0d9 342 SMART SM00859 5 122 7.1E-44 T 18-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 SHALO_0401 978ab022201b5b8ea2df85d4ecc6e0d9 342 SUPERFAMILY SSF55347 132 324 2.16E-76 T 18-10-2018 SHALO_0401 978ab022201b5b8ea2df85d4ecc6e0d9 342 PIRSF PIRSF000148 3 341 8.5E-125 T 18-10-2018 SHALO_0401 978ab022201b5b8ea2df85d4ecc6e0d9 342 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 3 337 38.478 T 18-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 SHALO_0401 978ab022201b5b8ea2df85d4ecc6e0d9 342 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 234 248 - T 18-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 SHALO_0401 978ab022201b5b8ea2df85d4ecc6e0d9 342 Gene3D G3DSA:3.30.360.10 131 320 3.2E-133 T 18-10-2018 SHALO_0401 978ab022201b5b8ea2df85d4ecc6e0d9 342 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 121 4.2E-33 T 18-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 SHALO_1560 c4546c9ca47013a767d942fe8e00bd6f 165 SUPERFAMILY SSF54534 3 142 4.91E-23 T 18-10-2018 SHALO_1560 c4546c9ca47013a767d942fe8e00bd6f 165 Gene3D G3DSA:3.10.50.40 3 151 8.4E-40 T 18-10-2018 SHALO_1560 c4546c9ca47013a767d942fe8e00bd6f 165 Gene3D G3DSA:2.40.10.330 70 123 8.4E-40 T 18-10-2018 SHALO_0700 ced559c6a0085961f927a286bde58b57 151 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 151 22.312 T 18-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 SHALO_0700 ced559c6a0085961f927a286bde58b57 151 SUPERFAMILY SSF75217 1 150 1.64E-34 T 18-10-2018 IPR029028 Alpha/beta knot methyltransferases SHALO_0700 ced559c6a0085961f927a286bde58b57 151 Gene3D G3DSA:3.40.1280.10 1 151 3.5E-39 T 18-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SHALO_0700 ced559c6a0085961f927a286bde58b57 151 PIRSF PIRSF004505 1 151 2.3E-39 T 18-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 SHALO_0700 ced559c6a0085961f927a286bde58b57 151 Pfam PF02590 Predicted SPOUT methyltransferase 1 150 3.0E-36 T 18-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 SHALO_1936 095ea788844379bb4f9c059de620ee95 138 Pfam PF09086 Domain of unknown function (DUF1924) 41 135 8.4E-36 T 18-10-2018 IPR015170 Protein of unknown function DUF1924 SHALO_1936 095ea788844379bb4f9c059de620ee95 138 SUPERFAMILY SSF46626 35 137 3.84E-26 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_1936 095ea788844379bb4f9c059de620ee95 138 Gene3D G3DSA:1.10.760.10 21 138 3.4E-42 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_0839 ef6a809a34f1f42ef1588950c88c3838 446 Gene3D G3DSA:3.40.50.720 228 360 1.5E-15 T 18-10-2018 SHALO_0839 ef6a809a34f1f42ef1588950c88c3838 446 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 3.2E-8 T 18-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 SHALO_0839 ef6a809a34f1f42ef1588950c88c3838 446 PRINTS PR00335 TrkA potassium uptake protein signature 18 32 3.2E-8 T 18-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 SHALO_0839 ef6a809a34f1f42ef1588950c88c3838 446 PRINTS PR00335 TrkA potassium uptake protein signature 71 85 3.2E-8 T 18-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 SHALO_0839 ef6a809a34f1f42ef1588950c88c3838 446 SUPERFAMILY SSF51735 1 136 2.17E-16 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_0839 ef6a809a34f1f42ef1588950c88c3838 446 Pfam PF02254 TrkA-N domain 230 342 2.8E-9 T 18-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SHALO_0839 ef6a809a34f1f42ef1588950c88c3838 446 Pfam PF02254 TrkA-N domain 3 102 9.7E-14 T 18-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SHALO_0839 ef6a809a34f1f42ef1588950c88c3838 446 Gene3D G3DSA:3.40.50.720 2 133 4.6E-26 T 18-10-2018 SHALO_0839 ef6a809a34f1f42ef1588950c88c3838 446 SUPERFAMILY SSF51735 228 357 7.72E-15 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_0669 a06f78c973e7e3da4bb2785df0649e24 102 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 102 24.155 T 18-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_0669 a06f78c973e7e3da4bb2785df0649e24 102 SUPERFAMILY SSF141091 1 100 7.72E-33 T 18-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_0669 a06f78c973e7e3da4bb2785df0649e24 102 ProSitePatterns PS01169 Ribosomal protein L21 signature. 71 93 - T 18-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_0669 a06f78c973e7e3da4bb2785df0649e24 102 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 100 3.1E-36 T 18-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_0669 a06f78c973e7e3da4bb2785df0649e24 102 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 100 2.5E-34 T 18-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_2316 5b5dbcaa77ec4a7be2254a0e9b051fd7 118 Gene3D G3DSA:3.90.1150.30 1 118 1.1E-43 T 18-10-2018 IPR038056 YjbR-like superfamily SHALO_2316 5b5dbcaa77ec4a7be2254a0e9b051fd7 118 SUPERFAMILY SSF142906 1 115 5.1E-40 T 18-10-2018 IPR038056 YjbR-like superfamily SHALO_2316 5b5dbcaa77ec4a7be2254a0e9b051fd7 118 Pfam PF04237 YjbR 13 102 2.3E-25 T 18-10-2018 IPR007351 Uncharacterised protein YjbR SHALO_2395 152af9211576c536f92ee166fae12faa 415 Gene3D G3DSA:3.90.170.10 261 415 2.0E-67 T 18-10-2018 SHALO_2395 152af9211576c536f92ee166fae12faa 415 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 415 1.7E-162 T 18-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 SHALO_2395 152af9211576c536f92ee166fae12faa 415 Gene3D G3DSA:3.40.440.10 6 257 2.6E-93 T 18-10-2018 SHALO_2395 152af9211576c536f92ee166fae12faa 415 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 10 17 - T 18-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 SHALO_2395 152af9211576c536f92ee166fae12faa 415 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 128 139 - T 18-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 SHALO_2395 152af9211576c536f92ee166fae12faa 415 Pfam PF00709 Adenylosuccinate synthetase 5 413 1.8E-168 T 18-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 SHALO_2395 152af9211576c536f92ee166fae12faa 415 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 415 181.134 T 18-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 SHALO_2395 152af9211576c536f92ee166fae12faa 415 SUPERFAMILY SSF52540 1 414 2.04E-157 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_2395 152af9211576c536f92ee166fae12faa 415 Gene3D G3DSA:1.10.300.10 97 195 2.6E-93 T 18-10-2018 SHALO_2395 152af9211576c536f92ee166fae12faa 415 SMART SM00788 3 414 2.9E-253 T 18-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 SHALO_1688 7b26664eaca168f5b066c1d7bb78b764 876 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 875 14.741 T 18-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 SHALO_1688 7b26664eaca168f5b066c1d7bb78b764 876 Gene3D G3DSA:1.10.730.10 7 744 2.0E-291 T 18-10-2018 SHALO_1688 7b26664eaca168f5b066c1d7bb78b764 876 SUPERFAMILY SSF52374 5 586 2.13E-129 T 18-10-2018 SHALO_1688 7b26664eaca168f5b066c1d7bb78b764 876 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 17 576 1.7E-187 T 18-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_1688 7b26664eaca168f5b066c1d7bb78b764 876 Gene3D G3DSA:3.40.50.620 24 537 2.0E-291 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_1688 7b26664eaca168f5b066c1d7bb78b764 876 SUPERFAMILY SSF50677 196 345 1.96E-59 T 18-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 SHALO_1688 7b26664eaca168f5b066c1d7bb78b764 876 SUPERFAMILY SSF47323 588 795 3.55E-42 T 18-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_1688 7b26664eaca168f5b066c1d7bb78b764 876 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 815 873 1.3E-12 T 18-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 SHALO_1688 7b26664eaca168f5b066c1d7bb78b764 876 Pfam PF08264 Anticodon-binding domain of tRNA 620 752 1.5E-27 T 18-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 SHALO_1688 7b26664eaca168f5b066c1d7bb78b764 876 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 49 60 - T 18-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_1688 7b26664eaca168f5b066c1d7bb78b764 876 SUPERFAMILY SSF46589 810 873 5.23E-12 T 18-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 SHALO_1688 7b26664eaca168f5b066c1d7bb78b764 876 Gene3D G3DSA:3.90.740.10 181 347 2.0E-291 T 18-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 SHALO_1688 7b26664eaca168f5b066c1d7bb78b764 876 Gene3D G3DSA:1.10.287.380 804 874 9.0E-10 T 18-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 SHALO_1688 7b26664eaca168f5b066c1d7bb78b764 876 TIGRFAM TIGR00422 valS: valine--tRNA ligase 6 855 0.0 T 18-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 SHALO_1688 7b26664eaca168f5b066c1d7bb78b764 876 PRINTS PR00986 Valyl-tRNA synthetase signature 448 469 1.3E-28 T 18-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 SHALO_1688 7b26664eaca168f5b066c1d7bb78b764 876 PRINTS PR00986 Valyl-tRNA synthetase signature 350 363 1.3E-28 T 18-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 SHALO_1688 7b26664eaca168f5b066c1d7bb78b764 876 PRINTS PR00986 Valyl-tRNA synthetase signature 235 252 1.3E-28 T 18-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 SHALO_1688 7b26664eaca168f5b066c1d7bb78b764 876 PRINTS PR00986 Valyl-tRNA synthetase signature 42 53 1.3E-28 T 18-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 SHALO_0845 55513c1cfcf7e3d64e39738fd4943f98 392 SUPERFAMILY SSF53335 107 283 4.78E-22 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_0845 55513c1cfcf7e3d64e39738fd4943f98 392 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 107 281 7.9E-42 T 18-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 SHALO_0845 55513c1cfcf7e3d64e39738fd4943f98 392 Pfam PF02390 Putative methyltransferase 121 281 6.4E-39 T 18-10-2018 SHALO_0845 55513c1cfcf7e3d64e39738fd4943f98 392 Gene3D G3DSA:3.40.50.150 98 290 3.8E-41 T 18-10-2018 SHALO_0845 55513c1cfcf7e3d64e39738fd4943f98 392 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 58 287 24.9 T 18-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 SHALO_0905 75f8e4811659fb6a365f5a6804fa682f 177 TIGRFAM TIGR03153 cytochr_NrfH: cytochrome c nitrite reductase, small subunit 14 158 7.8E-53 T 18-10-2018 IPR017571 Cytochrome c nitrite reductase, small subunit GO:0016021|GO:0022900 SHALO_0905 75f8e4811659fb6a365f5a6804fa682f 177 Gene3D G3DSA:1.10.3820.10 2 170 3.1E-43 T 18-10-2018 IPR038266 NapC/NirT cytochrome c superfamily SHALO_0905 75f8e4811659fb6a365f5a6804fa682f 177 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 8 160 2.6E-18 T 18-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal SHALO_0905 75f8e4811659fb6a365f5a6804fa682f 177 SUPERFAMILY SSF48695 9 158 2.1E-26 T 18-10-2018 IPR036280 Multiheme cytochrome superfamily SHALO_0905 75f8e4811659fb6a365f5a6804fa682f 177 PIRSF PIRSF000013 2 170 2.1E-9 T 18-10-2018 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 SHALO_1657 b65764718a02bd96bceec63e469b4219 305 Gene3D G3DSA:1.10.10.10 1 67 3.4E-14 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_1657 b65764718a02bd96bceec63e469b4219 305 PIRSF PIRSF016838 1 304 2.4E-25 T 18-10-2018 IPR028349 Protein PafC SHALO_1657 b65764718a02bd96bceec63e469b4219 305 Pfam PF13280 WYL domain 131 295 1.9E-34 T 18-10-2018 IPR026881 WYL domain SHALO_1657 b65764718a02bd96bceec63e469b4219 305 Pfam PF08279 HTH domain 5 56 5.6E-16 T 18-10-2018 IPR013196 Helix-turn-helix, type 11 SHALO_1657 b65764718a02bd96bceec63e469b4219 305 SUPERFAMILY SSF46785 4 57 7.69E-11 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SHALO_1605 20e3582eacea8bcb1df10c284ab2d18e 398 Gene3D G3DSA:3.50.50.60 234 398 1.1E-23 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SHALO_1605 20e3582eacea8bcb1df10c284ab2d18e 398 Gene3D G3DSA:3.50.50.60 109 225 9.9E-28 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SHALO_1605 20e3582eacea8bcb1df10c284ab2d18e 398 SUPERFAMILY SSF46548 7 119 1.83E-21 T 18-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 SHALO_1605 20e3582eacea8bcb1df10c284ab2d18e 398 SUPERFAMILY SSF51971 107 328 2.35E-56 T 18-10-2018 SHALO_1605 20e3582eacea8bcb1df10c284ab2d18e 398 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 234 258 2.9E-13 T 18-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHALO_1605 20e3582eacea8bcb1df10c284ab2d18e 398 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 359 377 2.9E-13 T 18-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHALO_1605 20e3582eacea8bcb1df10c284ab2d18e 398 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 110 132 2.9E-13 T 18-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHALO_1605 20e3582eacea8bcb1df10c284ab2d18e 398 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 323 344 2.9E-13 T 18-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHALO_1605 20e3582eacea8bcb1df10c284ab2d18e 398 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 109 381 8.7E-30 T 18-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_1605 20e3582eacea8bcb1df10c284ab2d18e 398 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 6 96 1.0E-25 T 18-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 SHALO_1605 20e3582eacea8bcb1df10c284ab2d18e 398 Gene3D G3DSA:1.10.1060.10 2 108 1.1E-28 T 18-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 SHALO_1605 20e3582eacea8bcb1df10c284ab2d18e 398 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 130 5.3E-20 T 18-10-2018 SHALO_1605 20e3582eacea8bcb1df10c284ab2d18e 398 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 238 256 5.3E-20 T 18-10-2018 SHALO_1605 20e3582eacea8bcb1df10c284ab2d18e 398 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 321 337 5.3E-20 T 18-10-2018 SHALO_1605 20e3582eacea8bcb1df10c284ab2d18e 398 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 349 371 5.3E-20 T 18-10-2018 SHALO_2747 87bab78ba27b6f9e6b96841785e3a288 311 SUPERFAMILY SSF47473 27 171 6.45E-14 T 18-10-2018 IPR011992 EF-hand domain pair SHALO_2747 87bab78ba27b6f9e6b96841785e3a288 311 SUPERFAMILY SSF47473 146 259 3.37E-7 T 18-10-2018 IPR011992 EF-hand domain pair SHALO_2747 87bab78ba27b6f9e6b96841785e3a288 311 Gene3D G3DSA:1.10.238.10 196 288 2.1E-5 T 18-10-2018 SHALO_2747 87bab78ba27b6f9e6b96841785e3a288 311 Pfam PF13202 EF hand 240 256 9.3E-4 T 18-10-2018 IPR002048 EF-hand domain GO:0005509 SHALO_2747 87bab78ba27b6f9e6b96841785e3a288 311 Pfam PF13499 EF-hand domain pair 68 166 7.2E-8 T 18-10-2018 IPR002048 EF-hand domain GO:0005509 SHALO_2747 87bab78ba27b6f9e6b96841785e3a288 311 SMART SM00054 67 95 0.009 T 18-10-2018 IPR002048 EF-hand domain GO:0005509 SHALO_2747 87bab78ba27b6f9e6b96841785e3a288 311 SMART SM00054 32 60 6.7 T 18-10-2018 IPR002048 EF-hand domain GO:0005509 SHALO_2747 87bab78ba27b6f9e6b96841785e3a288 311 SMART SM00054 146 174 4.7 T 18-10-2018 IPR002048 EF-hand domain GO:0005509 SHALO_2747 87bab78ba27b6f9e6b96841785e3a288 311 SMART SM00054 235 263 30.0 T 18-10-2018 IPR002048 EF-hand domain GO:0005509 SHALO_2747 87bab78ba27b6f9e6b96841785e3a288 311 ProSitePatterns PS00018 EF-hand calcium-binding domain. 76 88 - T 18-10-2018 IPR018247 EF-Hand 1, calcium-binding site SHALO_0184 1c04243db50e8a86d72295e39d243c77 265 SUPERFAMILY SSF143243 43 212 3.01E-47 T 18-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0184 1c04243db50e8a86d72295e39d243c77 265 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 141 162 - T 18-10-2018 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0184 1c04243db50e8a86d72295e39d243c77 265 Gene3D G3DSA:3.30.460.80 18 160 6.9E-33 T 18-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0184 1c04243db50e8a86d72295e39d243c77 265 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 61 179 1.2E-39 T 18-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0184 1c04243db50e8a86d72295e39d243c77 265 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 37 188 24.85 T 18-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0184 1c04243db50e8a86d72295e39d243c77 265 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 114 176 2.0E-18 T 18-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0184 1c04243db50e8a86d72295e39d243c77 265 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 62 181 5.0E-37 T 18-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_1609 9114c6aa412d21faa16bf275b468c517 149 Pfam PF12900 Pyridoxamine 5'-phosphate oxidase 5 133 7.7E-21 T 18-10-2018 IPR024747 Pyridoxamine 5'-phosphate oxidase-related SHALO_1609 9114c6aa412d21faa16bf275b468c517 149 SUPERFAMILY SSF50475 2 138 1.31E-32 T 18-10-2018 SHALO_1609 9114c6aa412d21faa16bf275b468c517 149 Gene3D G3DSA:2.30.110.10 1 146 1.4E-33 T 18-10-2018 IPR012349 FMN-binding split barrel GO:0048037 SHALO_1066 a2e03d961f83231190c194562df49eb4 426 Pfam PF00583 Acetyltransferase (GNAT) family 300 414 2.6E-9 T 18-10-2018 IPR000182 GNAT domain SHALO_1066 a2e03d961f83231190c194562df49eb4 426 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 196 272 1.4E-24 T 18-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 SHALO_1066 a2e03d961f83231190c194562df49eb4 426 Pfam PF12833 Helix-turn-helix domain 35 111 2.0E-14 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_1066 a2e03d961f83231190c194562df49eb4 426 Gene3D G3DSA:3.40.630.30 275 420 1.7E-23 T 18-10-2018 SHALO_1066 a2e03d961f83231190c194562df49eb4 426 SMART SM00342 28 110 5.5E-17 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_1066 a2e03d961f83231190c194562df49eb4 426 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 193 272 5.4E-29 T 18-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 SHALO_1066 a2e03d961f83231190c194562df49eb4 426 SUPERFAMILY SSF55729 281 421 3.12E-20 T 18-10-2018 IPR016181 Acyl-CoA N-acyltransferase SHALO_1066 a2e03d961f83231190c194562df49eb4 426 Gene3D G3DSA:1.10.10.60 11 108 2.5E-20 T 18-10-2018 SHALO_1066 a2e03d961f83231190c194562df49eb4 426 SUPERFAMILY SSF46767 192 273 3.4E-26 T 18-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 SHALO_1066 a2e03d961f83231190c194562df49eb4 426 Gene3D G3DSA:1.10.10.10 192 274 2.5E-27 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_1066 a2e03d961f83231190c194562df49eb4 426 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 243 249 - T 18-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 SHALO_1066 a2e03d961f83231190c194562df49eb4 426 Gene3D G3DSA:3.30.160.70 109 191 3.5E-12 T 18-10-2018 SHALO_1066 a2e03d961f83231190c194562df49eb4 426 SUPERFAMILY SSF53155 117 180 5.49E-14 T 18-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 SHALO_1066 a2e03d961f83231190c194562df49eb4 426 SUPERFAMILY SSF46689 11 61 3.72E-11 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SHALO_0807 86119be541fe0806a03fe0e56d10bd92 527 SUPERFAMILY SSF82693 54 142 7.32E-17 T 18-10-2018 SHALO_0807 86119be541fe0806a03fe0e56d10bd92 527 SUPERFAMILY SSF82866 315 515 2.22E-34 T 18-10-2018 SHALO_0807 86119be541fe0806a03fe0e56d10bd92 527 Gene3D G3DSA:3.30.70.1430 48 141 1.9E-112 T 18-10-2018 SHALO_0807 86119be541fe0806a03fe0e56d10bd92 527 PRINTS PR00702 Acriflavin resistance protein family signature 46 64 1.7E-25 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SHALO_0807 86119be541fe0806a03fe0e56d10bd92 527 PRINTS PR00702 Acriflavin resistance protein family signature 488 511 1.7E-25 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SHALO_0807 86119be541fe0806a03fe0e56d10bd92 527 PRINTS PR00702 Acriflavin resistance protein family signature 18 42 1.7E-25 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SHALO_0807 86119be541fe0806a03fe0e56d10bd92 527 PRINTS PR00702 Acriflavin resistance protein family signature 352 375 1.7E-25 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SHALO_0807 86119be541fe0806a03fe0e56d10bd92 527 PRINTS PR00702 Acriflavin resistance protein family signature 406 430 1.7E-25 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SHALO_0807 86119be541fe0806a03fe0e56d10bd92 527 Gene3D G3DSA:3.30.2090.10 190 286 1.9E-112 T 18-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SHALO_0807 86119be541fe0806a03fe0e56d10bd92 527 Pfam PF00873 AcrB/AcrD/AcrF family 13 523 2.1E-75 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SHALO_0807 86119be541fe0806a03fe0e56d10bd92 527 Gene3D G3DSA:1.20.1640.10 22 524 1.9E-112 T 18-10-2018 SHALO_0807 86119be541fe0806a03fe0e56d10bd92 527 Gene3D G3DSA:3.30.70.1320 142 346 1.9E-112 T 18-10-2018 SHALO_0807 86119be541fe0806a03fe0e56d10bd92 527 SUPERFAMILY SSF82714 194 276 5.23E-10 T 18-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SHALO_1339 e9ef3eba71f057fc09462006a9faf144 386 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 46 381 2.9E-71 T 18-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 SHALO_1339 e9ef3eba71f057fc09462006a9faf144 386 Gene3D G3DSA:2.40.30.170 65 291 4.0E-66 T 18-10-2018 SHALO_1339 e9ef3eba71f057fc09462006a9faf144 386 SUPERFAMILY SSF111369 59 306 2.09E-60 T 18-10-2018 SHALO_1339 e9ef3eba71f057fc09462006a9faf144 386 Gene3D G3DSA:2.40.50.100 70 215 4.0E-66 T 18-10-2018 SHALO_1339 e9ef3eba71f057fc09462006a9faf144 386 Gene3D G3DSA:2.40.420.20 292 382 2.8E-18 T 18-10-2018 SHALO_1339 e9ef3eba71f057fc09462006a9faf144 386 Gene3D G3DSA:1.10.287.470 105 178 4.0E-66 T 18-10-2018 SHALO_1339 e9ef3eba71f057fc09462006a9faf144 386 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 69 301 6.2E-11 T 18-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SHALO_1152 ee32181d5dd6a64306cbfbd1b84cb796 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 99 114 5.1E-21 T 18-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 SHALO_1152 ee32181d5dd6a64306cbfbd1b84cb796 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 127 142 5.1E-21 T 18-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 SHALO_1152 ee32181d5dd6a64306cbfbd1b84cb796 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 59 71 5.1E-21 T 18-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 SHALO_1152 ee32181d5dd6a64306cbfbd1b84cb796 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 114 126 5.1E-21 T 18-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 SHALO_1152 ee32181d5dd6a64306cbfbd1b84cb796 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 33 48 5.1E-21 T 18-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 SHALO_1152 ee32181d5dd6a64306cbfbd1b84cb796 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 21 152 6.4E-40 T 18-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 SHALO_1152 ee32181d5dd6a64306cbfbd1b84cb796 164 SUPERFAMILY SSF50891 19 153 2.92E-46 T 18-10-2018 IPR029000 Cyclophilin-like domain superfamily SHALO_1152 ee32181d5dd6a64306cbfbd1b84cb796 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 54 71 - T 18-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 SHALO_1152 ee32181d5dd6a64306cbfbd1b84cb796 164 Gene3D G3DSA:2.40.100.10 15 163 8.7E-51 T 18-10-2018 IPR029000 Cyclophilin-like domain superfamily SHALO_1152 ee32181d5dd6a64306cbfbd1b84cb796 164 PIRSF PIRSF001467 3 163 5.2E-38 T 18-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 SHALO_1148 3c7525a9f977759659a82a238cd130ae 221 Pfam PF04366 Las17-binding protein actin regulator 96 201 4.3E-29 T 18-10-2018 IPR007461 Ysc84 actin-binding domain SHALO_2840 3dc4f6e5f97d97150decbc68668611d4 328 Gene3D G3DSA:2.40.50.100 122 171 1.3E-23 T 18-10-2018 SHALO_2840 3dc4f6e5f97d97150decbc68668611d4 328 Gene3D G3DSA:2.40.420.20 247 328 9.7E-18 T 18-10-2018 SHALO_2840 3dc4f6e5f97d97150decbc68668611d4 328 Gene3D G3DSA:1.10.287.470 109 121 1.3E-23 T 18-10-2018 SHALO_2840 3dc4f6e5f97d97150decbc68668611d4 328 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 137 313 1.2E-29 T 18-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 SHALO_2840 3dc4f6e5f97d97150decbc68668611d4 328 Gene3D G3DSA:2.40.30.170 172 245 1.3E-23 T 18-10-2018 SHALO_2840 3dc4f6e5f97d97150decbc68668611d4 328 SUPERFAMILY SSF111369 54 247 3.92E-13 T 18-10-2018 SHALO_2840 3dc4f6e5f97d97150decbc68668611d4 328 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 42 243 2.9E-53 T 18-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SHALO_2725 41fd62348f9c9beb9cec924d0e70909e 83 SUPERFAMILY SSF47336 5 81 8.64E-13 T 18-10-2018 IPR036736 ACP-like superfamily SHALO_2725 41fd62348f9c9beb9cec924d0e70909e 83 Gene3D G3DSA:1.10.1200.10 1 83 5.3E-19 T 18-10-2018 IPR036736 ACP-like superfamily SHALO_2725 41fd62348f9c9beb9cec924d0e70909e 83 Pfam PF00550 Phosphopantetheine attachment site 6 79 2.4E-9 T 18-10-2018 IPR009081 Phosphopantetheine binding ACP domain SHALO_0284 5babd22cc6a50013946adf4858f6b6ac 276 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 101 269 2.4E-56 T 18-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 SHALO_0284 5babd22cc6a50013946adf4858f6b6ac 276 Gene3D G3DSA:3.20.20.70 115 260 9.1E-93 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_0284 5babd22cc6a50013946adf4858f6b6ac 276 PIRSF PIRSF006250 1 273 8.8E-83 T 18-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 SHALO_0284 5babd22cc6a50013946adf4858f6b6ac 276 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 6 270 1.7E-89 T 18-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 SHALO_0284 5babd22cc6a50013946adf4858f6b6ac 276 SUPERFAMILY SSF51690 101 270 6.28E-53 T 18-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 SHALO_0284 5babd22cc6a50013946adf4858f6b6ac 276 SUPERFAMILY SSF54675 2 100 2.94E-25 T 18-10-2018 SHALO_0284 5babd22cc6a50013946adf4858f6b6ac 276 Gene3D G3DSA:3.90.1170.20 8 266 9.1E-93 T 18-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 SHALO_0284 5babd22cc6a50013946adf4858f6b6ac 276 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 14 99 8.7E-23 T 18-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 SHALO_0971 d403fc59dd4820a68540b63a5f495440 554 Gene3D G3DSA:3.30.565.10 404 553 2.6E-34 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_0971 d403fc59dd4820a68540b63a5f495440 554 SUPERFAMILY SSF47384 327 401 4.32E-6 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SHALO_0971 d403fc59dd4820a68540b63a5f495440 554 PRINTS PR00344 Bacterial sensor protein C-terminal signature 515 533 1.4E-10 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_0971 d403fc59dd4820a68540b63a5f495440 554 PRINTS PR00344 Bacterial sensor protein C-terminal signature 539 552 1.4E-10 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_0971 d403fc59dd4820a68540b63a5f495440 554 PRINTS PR00344 Bacterial sensor protein C-terminal signature 502 512 1.4E-10 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_0971 d403fc59dd4820a68540b63a5f495440 554 PRINTS PR00344 Bacterial sensor protein C-terminal signature 484 498 1.4E-10 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_0971 d403fc59dd4820a68540b63a5f495440 554 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 445 552 1.7E-15 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_0971 d403fc59dd4820a68540b63a5f495440 554 Gene3D G3DSA:1.10.287.130 309 398 2.6E-10 T 18-10-2018 SHALO_0971 d403fc59dd4820a68540b63a5f495440 554 SMART SM00387 443 554 9.0E-16 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_0971 d403fc59dd4820a68540b63a5f495440 554 SUPERFAMILY SSF55874 401 552 3.27E-30 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_1727 b21a8ffd457aaca0d5236f0a564eb0fd 648 Gene3D G3DSA:1.10.150.20 492 561 3.2E-12 T 18-10-2018 SHALO_1727 b21a8ffd457aaca0d5236f0a564eb0fd 648 Gene3D G3DSA:3.40.50.10190 572 648 1.9E-24 T 18-10-2018 IPR036420 BRCT domain superfamily SHALO_1727 b21a8ffd457aaca0d5236f0a564eb0fd 648 SMART SM00278 529 548 2.5 T 18-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SHALO_1727 b21a8ffd457aaca0d5236f0a564eb0fd 648 SMART SM00278 499 518 220.0 T 18-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SHALO_1727 b21a8ffd457aaca0d5236f0a564eb0fd 648 SMART SM00278 433 452 240.0 T 18-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SHALO_1727 b21a8ffd457aaca0d5236f0a564eb0fd 648 SMART SM00278 467 486 2.4 T 18-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SHALO_1727 b21a8ffd457aaca0d5236f0a564eb0fd 648 Pfam PF12826 Helix-hairpin-helix motif 498 554 1.5E-10 T 18-10-2018 SHALO_1727 b21a8ffd457aaca0d5236f0a564eb0fd 648 SUPERFAMILY SSF50249 309 389 4.63E-26 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold SHALO_1727 b21a8ffd457aaca0d5236f0a564eb0fd 648 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 6 307 3.2E-106 T 18-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 SHALO_1727 b21a8ffd457aaca0d5236f0a564eb0fd 648 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 574 643 1.6E-12 T 18-10-2018 IPR001357 BRCT domain SHALO_1727 b21a8ffd457aaca0d5236f0a564eb0fd 648 Gene3D G3DSA:3.30.470.90 67 307 5.4E-85 T 18-10-2018 SHALO_1727 b21a8ffd457aaca0d5236f0a564eb0fd 648 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 397 421 1.8E-5 T 18-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 SHALO_1727 b21a8ffd457aaca0d5236f0a564eb0fd 648 Pfam PF14520 Helix-hairpin-helix domain 433 487 3.4E-5 T 18-10-2018 SHALO_1727 b21a8ffd457aaca0d5236f0a564eb0fd 648 Gene3D G3DSA:1.10.150.20 419 491 1.1E-25 T 18-10-2018 SHALO_1727 b21a8ffd457aaca0d5236f0a564eb0fd 648 PIRSF PIRSF001604 1 648 7.5E-225 T 18-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 SHALO_1727 b21a8ffd457aaca0d5236f0a564eb0fd 648 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 110 139 - T 18-10-2018 IPR018239 NAD-dependent DNA ligase, active site SHALO_1727 b21a8ffd457aaca0d5236f0a564eb0fd 648 SUPERFAMILY SSF56091 4 307 3.2E-104 T 18-10-2018 SHALO_1727 b21a8ffd457aaca0d5236f0a564eb0fd 648 SMART SM00532 1 435 4.0E-220 T 18-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 SHALO_1727 b21a8ffd457aaca0d5236f0a564eb0fd 648 SUPERFAMILY SSF47781 394 553 1.02E-48 T 18-10-2018 IPR010994 RuvA domain 2-like SHALO_1727 b21a8ffd457aaca0d5236f0a564eb0fd 648 Gene3D G3DSA:1.10.287.610 5 66 4.4E-15 T 18-10-2018 SHALO_1727 b21a8ffd457aaca0d5236f0a564eb0fd 648 SUPERFAMILY SSF52113 574 647 8.29E-19 T 18-10-2018 IPR036420 BRCT domain superfamily SHALO_1727 b21a8ffd457aaca0d5236f0a564eb0fd 648 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 312 388 1.0E-32 T 18-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 SHALO_1727 b21a8ffd457aaca0d5236f0a564eb0fd 648 Gene3D G3DSA:2.40.50.140 309 395 1.2E-32 T 18-10-2018 SHALO_1727 b21a8ffd457aaca0d5236f0a564eb0fd 648 Hamap MF_01588 DNA ligase [ligA]. 1 647 48.36 T 18-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 SHALO_1727 b21a8ffd457aaca0d5236f0a564eb0fd 648 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 14 643 3.0E-228 T 18-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 SHALO_1727 b21a8ffd457aaca0d5236f0a564eb0fd 648 SMART SM00292 574 648 5.4E-10 T 18-10-2018 IPR001357 BRCT domain SHALO_2662 0a90ad3cb8fd4ceb119560fd632946cd 338 Gene3D G3DSA:1.10.3470.10 1 337 2.1E-90 T 18-10-2018 IPR037294 ABC transporter, BtuC-like SHALO_2662 0a90ad3cb8fd4ceb119560fd632946cd 338 Pfam PF01032 FecCD transport family 14 330 5.5E-76 T 18-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 SHALO_2662 0a90ad3cb8fd4ceb119560fd632946cd 338 SUPERFAMILY SSF81345 5 330 5.23E-68 T 18-10-2018 IPR037294 ABC transporter, BtuC-like SHALO_1067 138b4baef982b91ff337a19170c46ae6 289 SUPERFAMILY SSF46689 236 286 3.23E-13 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SHALO_1067 138b4baef982b91ff337a19170c46ae6 289 Pfam PF12833 Helix-turn-helix domain 210 284 8.1E-17 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_1067 138b4baef982b91ff337a19170c46ae6 289 Gene3D G3DSA:1.10.10.60 182 288 5.0E-20 T 18-10-2018 SHALO_1067 138b4baef982b91ff337a19170c46ae6 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 252 267 5.9E-5 T 18-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SHALO_1067 138b4baef982b91ff337a19170c46ae6 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 267 283 5.9E-5 T 18-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SHALO_1067 138b4baef982b91ff337a19170c46ae6 289 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 237 279 - T 18-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 SHALO_1067 138b4baef982b91ff337a19170c46ae6 289 SMART SM00342 200 283 4.4E-19 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_0421 335a3652989691748a88b9477eb8fe4f 441 Gene3D G3DSA:1.10.287.470 103 190 3.0E-12 T 18-10-2018 SHALO_0421 335a3652989691748a88b9477eb8fe4f 441 Gene3D G3DSA:2.40.30.170 57 67 3.0E-12 T 18-10-2018 SHALO_0421 335a3652989691748a88b9477eb8fe4f 441 Gene3D G3DSA:2.40.50.100 68 102 3.0E-12 T 18-10-2018 SHALO_0421 335a3652989691748a88b9477eb8fe4f 441 Gene3D G3DSA:2.40.30.170 326 411 1.5E-9 T 18-10-2018 SHALO_0421 335a3652989691748a88b9477eb8fe4f 441 Pfam PF13533 Biotin-lipoyl like 78 111 1.5E-7 T 18-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain SHALO_0421 335a3652989691748a88b9477eb8fe4f 441 SUPERFAMILY SSF111369 62 142 3.66E-6 T 18-10-2018 SHALO_0421 335a3652989691748a88b9477eb8fe4f 441 Gene3D G3DSA:1.10.287.470 215 286 1.5E-9 T 18-10-2018 SHALO_0421 335a3652989691748a88b9477eb8fe4f 441 Pfam PF13437 HlyD family secretion protein 293 408 6.8E-12 T 18-10-2018 SHALO_0421 335a3652989691748a88b9477eb8fe4f 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 39 62 2.9E-42 T 18-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SHALO_0421 335a3652989691748a88b9477eb8fe4f 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 405 420 2.9E-42 T 18-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SHALO_0421 335a3652989691748a88b9477eb8fe4f 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 420 440 2.9E-42 T 18-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SHALO_0421 335a3652989691748a88b9477eb8fe4f 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 81 101 2.9E-42 T 18-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SHALO_0421 335a3652989691748a88b9477eb8fe4f 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 305 326 2.9E-42 T 18-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SHALO_0421 335a3652989691748a88b9477eb8fe4f 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 338 362 2.9E-42 T 18-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SHALO_0421 335a3652989691748a88b9477eb8fe4f 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 362 385 2.9E-42 T 18-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SHALO_0421 335a3652989691748a88b9477eb8fe4f 441 ProSitePatterns PS00543 HlyD family secretion proteins signature. 405 427 - T 18-10-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 SHALO_0421 335a3652989691748a88b9477eb8fe4f 441 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 30 438 1.4E-87 T 18-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 SHALO_0421 335a3652989691748a88b9477eb8fe4f 441 Gene3D G3DSA:2.40.50.100 212 325 1.5E-9 T 18-10-2018 SHALO_2215 55d014ab3e3551802e47fef3aebea02a 193 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 62 97 0.1 T 18-10-2018 IPR001451 Hexapeptide repeat SHALO_2215 55d014ab3e3551802e47fef3aebea02a 193 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 120 152 8.2E-9 T 18-10-2018 IPR001451 Hexapeptide repeat SHALO_2215 55d014ab3e3551802e47fef3aebea02a 193 SUPERFAMILY SSF51161 23 177 3.74E-32 T 18-10-2018 IPR011004 Trimeric LpxA-like superfamily SHALO_2215 55d014ab3e3551802e47fef3aebea02a 193 Gene3D G3DSA:2.160.10.10 24 186 8.2E-34 T 18-10-2018 SHALO_2687 06cb6e43d80b4c7b7aa9df563c18f278 560 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 241 252 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_2687 06cb6e43d80b4c7b7aa9df563c18f278 560 Pfam PF13237 4Fe-4S dicluster domain 420 469 3.0E-6 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_2687 06cb6e43d80b4c7b7aa9df563c18f278 560 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 458 469 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_2687 06cb6e43d80b4c7b7aa9df563c18f278 560 Gene3D G3DSA:3.30.70.20 415 481 5.0E-9 T 18-10-2018 SHALO_2687 06cb6e43d80b4c7b7aa9df563c18f278 560 Gene3D G3DSA:3.30.70.20 198 271 6.6E-10 T 18-10-2018 SHALO_2687 06cb6e43d80b4c7b7aa9df563c18f278 560 Pfam PF12838 4Fe-4S dicluster domain 213 255 9.5E-7 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_2687 06cb6e43d80b4c7b7aa9df563c18f278 560 SUPERFAMILY SSF54862 153 522 1.93E-31 T 18-10-2018 SHALO_1458 1734f11709e5ad843776c77b6605edf4 413 Gene3D G3DSA:1.20.81.30 265 374 3.9E-24 T 18-10-2018 SHALO_1458 1734f11709e5ad843776c77b6605edf4 413 Gene3D G3DSA:1.20.81.30 61 179 2.2E-23 T 18-10-2018 SHALO_1458 1734f11709e5ad843776c77b6605edf4 413 Pfam PF00482 Type II secretion system (T2SS), protein F 281 403 9.7E-24 T 18-10-2018 IPR018076 Type II secretion system F domain SHALO_1458 1734f11709e5ad843776c77b6605edf4 413 Pfam PF00482 Type II secretion system (T2SS), protein F 77 200 1.1E-26 T 18-10-2018 IPR018076 Type II secretion system F domain SHALO_1458 1734f11709e5ad843776c77b6605edf4 413 PRINTS PR00812 Bacterial general secretion pathway protein F signature 172 200 7.5E-10 T 18-10-2018 IPR003004 GspF/PilC family SHALO_1458 1734f11709e5ad843776c77b6605edf4 413 PRINTS PR00812 Bacterial general secretion pathway protein F signature 376 390 7.5E-10 T 18-10-2018 IPR003004 GspF/PilC family SHALO_1458 1734f11709e5ad843776c77b6605edf4 413 PRINTS PR00812 Bacterial general secretion pathway protein F signature 392 411 7.5E-10 T 18-10-2018 IPR003004 GspF/PilC family SHALO_1458 1734f11709e5ad843776c77b6605edf4 413 PRINTS PR00812 Bacterial general secretion pathway protein F signature 73 85 7.5E-10 T 18-10-2018 IPR003004 GspF/PilC family SHALO_0563 ec628f1de910c692b67ab52c9555ae0d 528 PRINTS PR01038 Arginyl-tRNA synthetase signature 283 304 1.4E-22 T 18-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 SHALO_0563 ec628f1de910c692b67ab52c9555ae0d 528 PRINTS PR01038 Arginyl-tRNA synthetase signature 104 119 1.4E-22 T 18-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 SHALO_0563 ec628f1de910c692b67ab52c9555ae0d 528 PRINTS PR01038 Arginyl-tRNA synthetase signature 143 156 1.4E-22 T 18-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 SHALO_0563 ec628f1de910c692b67ab52c9555ae0d 528 PRINTS PR01038 Arginyl-tRNA synthetase signature 119 135 1.4E-22 T 18-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 SHALO_0563 ec628f1de910c692b67ab52c9555ae0d 528 SUPERFAMILY SSF52374 101 424 5.12E-80 T 18-10-2018 SHALO_0563 ec628f1de910c692b67ab52c9555ae0d 528 SMART SM01016 3 77 1.2E-23 T 18-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 SHALO_0563 ec628f1de910c692b67ab52c9555ae0d 528 SUPERFAMILY SSF47323 408 528 1.24E-22 T 18-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_0563 ec628f1de910c692b67ab52c9555ae0d 528 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 3 77 1.2E-17 T 18-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 SHALO_0563 ec628f1de910c692b67ab52c9555ae0d 528 Gene3D G3DSA:3.40.50.620 104 408 5.1E-165 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_0563 ec628f1de910c692b67ab52c9555ae0d 528 SUPERFAMILY SSF55190 4 86 2.09E-19 T 18-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 SHALO_0563 ec628f1de910c692b67ab52c9555ae0d 528 Hamap MF_00123 Arginine--tRNA ligase [argS]. 3 528 23.532 T 18-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 SHALO_0563 ec628f1de910c692b67ab52c9555ae0d 528 Pfam PF00750 tRNA synthetases class I (R) 98 386 2.9E-19 T 18-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 SHALO_0563 ec628f1de910c692b67ab52c9555ae0d 528 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 114 123 - T 18-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_0563 ec628f1de910c692b67ab52c9555ae0d 528 Gene3D G3DSA:1.10.730.10 409 528 5.1E-165 T 18-10-2018 SHALO_0563 ec628f1de910c692b67ab52c9555ae0d 528 Pfam PF05746 DALR anticodon binding domain 414 528 1.1E-24 T 18-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 SHALO_0563 ec628f1de910c692b67ab52c9555ae0d 528 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 8 528 3.0E-134 T 18-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 SHALO_0563 ec628f1de910c692b67ab52c9555ae0d 528 SMART SM00836 414 528 1.8E-32 T 18-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 SHALO_0563 ec628f1de910c692b67ab52c9555ae0d 528 Gene3D G3DSA:3.30.1360.70 1 101 7.0E-22 T 18-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 SHALO_2243 6b36ea09c1edcd899073acf8519406d4 324 Pfam PF00534 Glycosyl transferases group 1 135 298 1.9E-14 T 18-10-2018 IPR001296 Glycosyl transferase, family 1 SHALO_2243 6b36ea09c1edcd899073acf8519406d4 324 Gene3D G3DSA:3.40.50.2000 124 305 8.9E-22 T 18-10-2018 SHALO_2243 6b36ea09c1edcd899073acf8519406d4 324 SUPERFAMILY SSF53756 72 304 1.73E-27 T 18-10-2018 SHALO_2466 d887c3a9e4addb29539a30b4e0046144 673 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 459 1.3E-13 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_2466 d887c3a9e4addb29539a30b4e0046144 673 PRINTS PR00344 Bacterial sensor protein C-terminal signature 501 519 1.3E-13 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_2466 d887c3a9e4addb29539a30b4e0046144 673 PRINTS PR00344 Bacterial sensor protein C-terminal signature 525 538 1.3E-13 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_2466 d887c3a9e4addb29539a30b4e0046144 673 SUPERFAMILY SSF47384 294 355 3.65E-8 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SHALO_2466 d887c3a9e4addb29539a30b4e0046144 673 Gene3D G3DSA:1.10.287.560 293 354 8.6E-11 T 18-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 SHALO_2466 d887c3a9e4addb29539a30b4e0046144 673 SMART SM00260 533 673 1.8E-26 T 18-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 SHALO_2466 d887c3a9e4addb29539a30b4e0046144 673 SUPERFAMILY SSF55874 352 544 2.23E-38 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_2466 d887c3a9e4addb29539a30b4e0046144 673 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 294 353 1.5E-7 T 18-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 SHALO_2466 d887c3a9e4addb29539a30b4e0046144 673 SMART SM00073 2 100 2.7E-21 T 18-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 SHALO_2466 d887c3a9e4addb29539a30b4e0046144 673 SMART SM00387 399 541 6.8E-23 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_2466 d887c3a9e4addb29539a30b4e0046144 673 Gene3D G3DSA:1.20.120.160 1 142 3.0E-30 T 18-10-2018 IPR036641 HPT domain superfamily GO:0000160 SHALO_2466 d887c3a9e4addb29539a30b4e0046144 673 Gene3D G3DSA:3.30.565.10 355 540 3.6E-56 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_2466 d887c3a9e4addb29539a30b4e0046144 673 Pfam PF01584 CheW-like domain 546 672 6.5E-18 T 18-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 SHALO_2466 d887c3a9e4addb29539a30b4e0046144 673 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 401 540 1.2E-17 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_2466 d887c3a9e4addb29539a30b4e0046144 673 SMART SM01231 292 354 1.8E-7 T 18-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 SHALO_2466 d887c3a9e4addb29539a30b4e0046144 673 Pfam PF01627 Hpt domain 6 93 1.1E-13 T 18-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 SHALO_2466 d887c3a9e4addb29539a30b4e0046144 673 Gene3D G3DSA:2.40.50.180 564 628 3.6E-33 T 18-10-2018 SHALO_2466 d887c3a9e4addb29539a30b4e0046144 673 SUPERFAMILY SSF47226 4 124 2.75E-26 T 18-10-2018 IPR036641 HPT domain superfamily GO:0000160 SHALO_2466 d887c3a9e4addb29539a30b4e0046144 673 SUPERFAMILY SSF50341 540 672 3.4E-25 T 18-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 SHALO_2466 d887c3a9e4addb29539a30b4e0046144 673 Gene3D G3DSA:2.30.30.40 541 669 3.6E-33 T 18-10-2018 SHALO_3018 e567c5c61533792cc80051dec5ab4de9 831 SUPERFAMILY SSF117143 509 792 6.67E-42 T 18-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like SHALO_3018 e567c5c61533792cc80051dec5ab4de9 831 Pfam PF00460 Flagella basal body rod protein 4 34 6.2E-12 T 18-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 SHALO_3018 e567c5c61533792cc80051dec5ab4de9 831 Gene3D G3DSA:2.60.98.20 524 713 4.5E-9 T 18-10-2018 IPR037058 Flagellar hook protein FlgE superfamily SHALO_3018 e567c5c61533792cc80051dec5ab4de9 831 SUPERFAMILY SSF117143 90 309 1.7E-27 T 18-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like SHALO_3018 e567c5c61533792cc80051dec5ab4de9 831 Pfam PF07559 Flagellar basal body protein FlaE 594 712 2.1E-16 T 18-10-2018 IPR011491 Flagellar hook protein FlgE SHALO_3018 e567c5c61533792cc80051dec5ab4de9 831 TIGRFAM TIGR02489 flgE_epsilon: flagellar hook protein FlgE 1 830 1.6E-223 T 18-10-2018 IPR012835 Flagellar hook FlgE GO:0009288|GO:0044781 SHALO_3018 e567c5c61533792cc80051dec5ab4de9 831 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 557 813 6.6E-42 T 18-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G SHALO_3018 e567c5c61533792cc80051dec5ab4de9 831 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 2 314 9.8E-36 T 18-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G SHALO_3018 e567c5c61533792cc80051dec5ab4de9 831 Pfam PF07196 Flagellin hook IN motif 279 334 1.0E-6 T 18-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 SHALO_3018 e567c5c61533792cc80051dec5ab4de9 831 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 753 830 5.6E-19 T 18-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain SHALO_0959 4abac20bab4b35e9b86d97f06bd1f0fa 525 Pfam PF03929 PepSY-associated TM region 15 372 2.9E-31 T 18-10-2018 IPR005625 PepSY-associated TM protein SHALO_0536 e254aec9af726e57f72850b87652e69a 945 Gene3D G3DSA:3.40.190.10 276 503 4.2E-61 T 18-10-2018 SHALO_0536 e254aec9af726e57f72850b87652e69a 945 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 255 9.1E-25 T 18-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SHALO_0536 e254aec9af726e57f72850b87652e69a 945 SUPERFAMILY SSF53850 39 256 5.83E-33 T 18-10-2018 SHALO_0536 e254aec9af726e57f72850b87652e69a 945 Gene3D G3DSA:3.40.190.10 519 744 1.6E-61 T 18-10-2018 SHALO_0536 e254aec9af726e57f72850b87652e69a 945 Gene3D G3DSA:3.40.190.10 369 466 4.2E-61 T 18-10-2018 SHALO_0536 e254aec9af726e57f72850b87652e69a 945 SMART SM00267 779 945 2.1E-42 T 18-10-2018 IPR000160 GGDEF domain SHALO_0536 e254aec9af726e57f72850b87652e69a 945 SMART SM00062 38 258 5.7E-15 T 18-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SHALO_0536 e254aec9af726e57f72850b87652e69a 945 SMART SM00062 285 507 1.1E-28 T 18-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SHALO_0536 e254aec9af726e57f72850b87652e69a 945 SMART SM00062 529 748 6.7E-25 T 18-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SHALO_0536 e254aec9af726e57f72850b87652e69a 945 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 786 944 4.6E-46 T 18-10-2018 IPR000160 GGDEF domain SHALO_0536 e254aec9af726e57f72850b87652e69a 945 SUPERFAMILY SSF53850 530 748 5.6E-36 T 18-10-2018 SHALO_0536 e254aec9af726e57f72850b87652e69a 945 Pfam PF00990 Diguanylate cyclase, GGDEF domain 791 943 1.4E-38 T 18-10-2018 IPR000160 GGDEF domain SHALO_0536 e254aec9af726e57f72850b87652e69a 945 SUPERFAMILY SSF53850 288 505 2.84E-41 T 18-10-2018 SHALO_0536 e254aec9af726e57f72850b87652e69a 945 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 530 745 2.7E-24 T 18-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SHALO_0536 e254aec9af726e57f72850b87652e69a 945 Gene3D G3DSA:3.40.190.10 29 253 3.9E-53 T 18-10-2018 SHALO_0536 e254aec9af726e57f72850b87652e69a 945 SUPERFAMILY SSF55073 795 945 5.65E-43 T 18-10-2018 IPR029787 Nucleotide cyclase SHALO_0536 e254aec9af726e57f72850b87652e69a 945 Gene3D G3DSA:3.30.70.270 775 945 1.9E-51 T 18-10-2018 SHALO_0536 e254aec9af726e57f72850b87652e69a 945 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 293 505 4.8E-34 T 18-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SHALO_0536 e254aec9af726e57f72850b87652e69a 945 Gene3D G3DSA:3.40.190.10 123 217 3.9E-53 T 18-10-2018 SHALO_0536 e254aec9af726e57f72850b87652e69a 945 Gene3D G3DSA:3.40.190.10 613 707 1.6E-61 T 18-10-2018 SHALO_2389 0841fced9869f6f46e2f456661adffa5 407 SUPERFAMILY SSF47384 177 249 9.61E-5 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SHALO_2389 0841fced9869f6f46e2f456661adffa5 407 SUPERFAMILY SSF55874 253 404 1.31E-27 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_2389 0841fced9869f6f46e2f456661adffa5 407 Pfam PF08447 PAS fold 26 110 9.2E-16 T 18-10-2018 IPR013655 PAS fold-3 GO:0005515 SHALO_2389 0841fced9869f6f46e2f456661adffa5 407 Gene3D G3DSA:3.30.565.10 253 406 3.6E-30 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_2389 0841fced9869f6f46e2f456661adffa5 407 SMART SM00091 4 70 1.5E-4 T 18-10-2018 IPR000014 PAS domain SHALO_2389 0841fced9869f6f46e2f456661adffa5 407 SMART SM00086 75 117 6.9E-7 T 18-10-2018 IPR001610 PAC motif SHALO_2389 0841fced9869f6f46e2f456661adffa5 407 SUPERFAMILY SSF55785 12 114 3.84E-27 T 18-10-2018 IPR035965 PAS domain superfamily SHALO_2389 0841fced9869f6f46e2f456661adffa5 407 Gene3D G3DSA:1.10.287.130 172 250 4.9E-10 T 18-10-2018 SHALO_2389 0841fced9869f6f46e2f456661adffa5 407 Gene3D G3DSA:3.30.450.20 2 171 2.7E-33 T 18-10-2018 SHALO_2389 0841fced9869f6f46e2f456661adffa5 407 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 3 124 4.3E-23 T 18-10-2018 IPR000014 PAS domain SHALO_2389 0841fced9869f6f46e2f456661adffa5 407 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 297 404 6.2E-13 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_2389 0841fced9869f6f46e2f456661adffa5 407 PRINTS PR00344 Bacterial sensor protein C-terminal signature 366 384 5.8E-9 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_2389 0841fced9869f6f46e2f456661adffa5 407 PRINTS PR00344 Bacterial sensor protein C-terminal signature 335 349 5.8E-9 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_2389 0841fced9869f6f46e2f456661adffa5 407 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 363 5.8E-9 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_2389 0841fced9869f6f46e2f456661adffa5 407 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 403 5.8E-9 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_2389 0841fced9869f6f46e2f456661adffa5 407 SMART SM00387 293 406 1.9E-13 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_2784 b92fe7caf9bfae30573fabca85936d0d 263 Hamap MF_00443 Thiazole synthase [thiG]. 4 258 41.929 T 18-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 SHALO_2784 b92fe7caf9bfae30573fabca85936d0d 263 Gene3D G3DSA:3.20.20.70 2 263 1.6E-104 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_2784 b92fe7caf9bfae30573fabca85936d0d 263 Pfam PF05690 Thiazole biosynthesis protein ThiG 7 252 1.0E-101 T 18-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 SHALO_2784 b92fe7caf9bfae30573fabca85936d0d 263 SUPERFAMILY SSF110399 3 243 2.88E-81 T 18-10-2018 SHALO_0989 947586aed98e4f89f96ec500f95a5079 535 SMART SM00283 274 535 1.2E-40 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_0989 947586aed98e4f89f96ec500f95a5079 535 Gene3D G3DSA:1.10.287.950 207 535 4.2E-58 T 18-10-2018 SHALO_0989 947586aed98e4f89f96ec500f95a5079 535 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 1 13 4.0E-20 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 SHALO_0989 947586aed98e4f89f96ec500f95a5079 535 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 372 399 4.0E-20 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 SHALO_0989 947586aed98e4f89f96ec500f95a5079 535 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 401 430 4.0E-20 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 SHALO_0989 947586aed98e4f89f96ec500f95a5079 535 Pfam PF12729 Four helix bundle sensory module for signal transduction 1 175 9.0E-23 T 18-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain SHALO_0989 947586aed98e4f89f96ec500f95a5079 535 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 353 522 7.0E-33 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_0989 947586aed98e4f89f96ec500f95a5079 535 SUPERFAMILY SSF58104 228 534 9.59E-56 T 18-10-2018 SHALO_0159 c66bc13e0b7fadd605f76fe2fa1fe4cc 172 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 103 118 5.8E-34 T 18-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 SHALO_0159 c66bc13e0b7fadd605f76fe2fa1fe4cc 172 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 34 49 5.8E-34 T 18-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 SHALO_0159 c66bc13e0b7fadd605f76fe2fa1fe4cc 172 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 60 72 5.8E-34 T 18-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 SHALO_0159 c66bc13e0b7fadd605f76fe2fa1fe4cc 172 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 131 146 5.8E-34 T 18-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 SHALO_0159 c66bc13e0b7fadd605f76fe2fa1fe4cc 172 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 130 5.8E-34 T 18-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 SHALO_0159 c66bc13e0b7fadd605f76fe2fa1fe4cc 172 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 21 169 9.0E-55 T 18-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 SHALO_0159 c66bc13e0b7fadd605f76fe2fa1fe4cc 172 SUPERFAMILY SSF50891 10 171 4.68E-65 T 18-10-2018 IPR029000 Cyclophilin-like domain superfamily SHALO_0159 c66bc13e0b7fadd605f76fe2fa1fe4cc 172 PIRSF PIRSF001467 10 171 4.4E-62 T 18-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 SHALO_0159 c66bc13e0b7fadd605f76fe2fa1fe4cc 172 Gene3D G3DSA:2.40.100.10 14 172 8.9E-71 T 18-10-2018 IPR029000 Cyclophilin-like domain superfamily SHALO_1181 bf3d89b60088263d29d5517faabfd3c9 571 Gene3D G3DSA:3.30.565.10 308 532 4.5E-44 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_1181 bf3d89b60088263d29d5517faabfd3c9 571 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 357 473 5.1E-16 T 18-10-2018 SHALO_1181 bf3d89b60088263d29d5517faabfd3c9 571 SUPERFAMILY SSF109604 40 224 8.5E-7 T 18-10-2018 SHALO_1181 bf3d89b60088263d29d5517faabfd3c9 571 PRINTS PR00775 90kDa heat shock protein signature 435 457 7.4E-7 T 18-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal SHALO_1181 bf3d89b60088263d29d5517faabfd3c9 571 PRINTS PR00775 90kDa heat shock protein signature 351 373 7.4E-7 T 18-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal SHALO_1181 bf3d89b60088263d29d5517faabfd3c9 571 Gene3D G3DSA:1.10.3210.10 51 307 1.4E-5 T 18-10-2018 SHALO_1181 bf3d89b60088263d29d5517faabfd3c9 571 SUPERFAMILY SSF55874 335 497 2.1E-30 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_1127 bc8e5a76d6f2d400bfb5f4c1908b02d1 79 SUPERFAMILY SSF55229 32 77 3.14E-7 T 18-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 SHALO_1127 bc8e5a76d6f2d400bfb5f4c1908b02d1 79 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 77 3.8E-24 T 18-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 SHALO_1127 bc8e5a76d6f2d400bfb5f4c1908b02d1 79 Gene3D G3DSA:3.30.1070.10 1 79 7.5E-26 T 18-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 SHALO_1127 bc8e5a76d6f2d400bfb5f4c1908b02d1 79 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 79 14.353 T 18-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 SHALO_1127 bc8e5a76d6f2d400bfb5f4c1908b02d1 79 Pfam PF03776 Septum formation topological specificity factor MinE 14 77 3.9E-18 T 18-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 SHALO_2516 8a1c489472a4d5931c7489864ad45fe3 235 Pfam PF00072 Response regulator receiver domain 10 120 1.3E-16 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_2516 8a1c489472a4d5931c7489864ad45fe3 235 SUPERFAMILY SSF52172 7 134 4.13E-29 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_2516 8a1c489472a4d5931c7489864ad45fe3 235 Gene3D G3DSA:3.40.50.2300 1 131 1.5E-27 T 18-10-2018 SHALO_2516 8a1c489472a4d5931c7489864ad45fe3 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 164 233 3.5E-10 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_2516 8a1c489472a4d5931c7489864ad45fe3 235 SMART SM00862 163 233 5.0E-8 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_2516 8a1c489472a4d5931c7489864ad45fe3 235 Gene3D G3DSA:1.10.10.10 148 235 1.5E-15 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_2516 8a1c489472a4d5931c7489864ad45fe3 235 SUPERFAMILY SSF46894 149 233 5.39E-13 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHALO_2516 8a1c489472a4d5931c7489864ad45fe3 235 SMART SM00448 8 120 3.6E-21 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_2349 a185053cea02eeeeebe51af4d8bbdbd7 567 SMART SM00387 456 567 9.0E-12 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_2349 a185053cea02eeeeebe51af4d8bbdbd7 567 SUPERFAMILY SSF47384 341 414 2.94E-6 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SHALO_2349 a185053cea02eeeeebe51af4d8bbdbd7 567 Gene3D G3DSA:3.30.565.10 417 567 7.7E-28 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_2349 a185053cea02eeeeebe51af4d8bbdbd7 567 SUPERFAMILY SSF55874 418 565 2.23E-24 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_2349 a185053cea02eeeeebe51af4d8bbdbd7 567 Pfam PF05228 CHASE4 domain 61 196 2.0E-11 T 18-10-2018 IPR007892 CHASE4 SHALO_2349 a185053cea02eeeeebe51af4d8bbdbd7 567 PRINTS PR00344 Bacterial sensor protein C-terminal signature 497 511 3.4E-7 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_2349 a185053cea02eeeeebe51af4d8bbdbd7 567 PRINTS PR00344 Bacterial sensor protein C-terminal signature 515 525 3.4E-7 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_2349 a185053cea02eeeeebe51af4d8bbdbd7 567 PRINTS PR00344 Bacterial sensor protein C-terminal signature 528 546 3.4E-7 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_2349 a185053cea02eeeeebe51af4d8bbdbd7 567 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 459 566 7.1E-12 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_2349 a185053cea02eeeeebe51af4d8bbdbd7 567 Gene3D G3DSA:1.10.287.130 335 413 2.2E-10 T 18-10-2018 SHALO_0016 cdbc2123b2f1ed8de7d0e958213246c1 216 SUPERFAMILY SSF46785 10 100 7.39E-15 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SHALO_0016 cdbc2123b2f1ed8de7d0e958213246c1 216 Pfam PF07729 FCD domain 84 205 3.5E-25 T 18-10-2018 IPR011711 GntR, C-terminal SHALO_0016 cdbc2123b2f1ed8de7d0e958213246c1 216 Gene3D G3DSA:1.10.10.10 10 75 9.7E-17 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_0016 cdbc2123b2f1ed8de7d0e958213246c1 216 Gene3D G3DSA:1.20.120.530 77 215 3.4E-27 T 18-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal SHALO_0016 cdbc2123b2f1ed8de7d0e958213246c1 216 SMART SM00895 84 206 1.4E-19 T 18-10-2018 IPR011711 GntR, C-terminal SHALO_0016 cdbc2123b2f1ed8de7d0e958213246c1 216 SUPERFAMILY SSF48008 81 212 1.49E-27 T 18-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal SHALO_0016 cdbc2123b2f1ed8de7d0e958213246c1 216 SMART SM00345 16 74 6.7E-6 T 18-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SHALO_0016 cdbc2123b2f1ed8de7d0e958213246c1 216 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 71 6.3E-12 T 18-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SHALO_0246 8e7f480e5023db69c57b644fe008091a 316 Pfam PF00072 Response regulator receiver domain 185 294 3.2E-14 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_0246 8e7f480e5023db69c57b644fe008091a 316 SMART SM00448 182 308 5.2E-19 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_0246 8e7f480e5023db69c57b644fe008091a 316 Pfam PF01584 CheW-like domain 32 162 7.8E-35 T 18-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 SHALO_0246 8e7f480e5023db69c57b644fe008091a 316 SUPERFAMILY SSF50341 12 162 1.7E-29 T 18-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 SHALO_0246 8e7f480e5023db69c57b644fe008091a 316 Gene3D G3DSA:2.40.50.180 40 159 1.8E-31 T 18-10-2018 SHALO_0246 8e7f480e5023db69c57b644fe008091a 316 PIRSF PIRSF002867 1 312 9.9E-97 T 18-10-2018 IPR024181 Chemotaxis response regulator CheV SHALO_0246 8e7f480e5023db69c57b644fe008091a 316 SUPERFAMILY SSF52172 183 309 2.7E-23 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_0246 8e7f480e5023db69c57b644fe008091a 316 Gene3D G3DSA:3.40.50.2300 180 316 8.4E-22 T 18-10-2018 SHALO_0246 8e7f480e5023db69c57b644fe008091a 316 SMART SM00260 11 160 1.6E-35 T 18-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 SHALO_0246 8e7f480e5023db69c57b644fe008091a 316 Gene3D G3DSA:2.30.30.40 32 154 1.8E-31 T 18-10-2018 SHALO_2127 217d383d10c896650f38aac58b6c8e16 531 SMART SM00382 26 231 3.7E-12 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_2127 217d383d10c896650f38aac58b6c8e16 531 SMART SM00382 346 512 3.0E-13 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_2127 217d383d10c896650f38aac58b6c8e16 531 Gene3D G3DSA:3.40.50.300 2 284 1.9E-55 T 18-10-2018 SHALO_2127 217d383d10c896650f38aac58b6c8e16 531 Pfam PF00005 ABC transporter 18 186 9.3E-23 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_2127 217d383d10c896650f38aac58b6c8e16 531 Gene3D G3DSA:3.40.50.300 285 531 1.3E-53 T 18-10-2018 SHALO_2127 217d383d10c896650f38aac58b6c8e16 531 SUPERFAMILY SSF52540 2 241 1.08E-41 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_2127 217d383d10c896650f38aac58b6c8e16 531 Pfam PF00005 ABC transporter 337 468 3.8E-24 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_2127 217d383d10c896650f38aac58b6c8e16 531 Pfam PF12848 ABC transporter 226 309 1.9E-18 T 18-10-2018 IPR032781 ABC-transporter extension domain SHALO_2127 217d383d10c896650f38aac58b6c8e16 531 SUPERFAMILY SSF52540 302 523 7.69E-45 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0279 7a5e506215fc3c7d617e29697ca8233a 436 SMART SM00387 327 433 3.8E-22 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_0279 7a5e506215fc3c7d617e29697ca8233a 436 SUPERFAMILY SSF47384 201 280 7.06E-11 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SHALO_0279 7a5e506215fc3c7d617e29697ca8233a 436 Pfam PF00512 His Kinase A (phospho-acceptor) domain 217 281 1.4E-7 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_0279 7a5e506215fc3c7d617e29697ca8233a 436 SMART SM00388 216 282 1.5E-4 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_0279 7a5e506215fc3c7d617e29697ca8233a 436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 430 3.3E-7 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_0279 7a5e506215fc3c7d617e29697ca8233a 436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 364 378 3.3E-7 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_0279 7a5e506215fc3c7d617e29697ca8233a 436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 390 3.3E-7 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_0279 7a5e506215fc3c7d617e29697ca8233a 436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 410 3.3E-7 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_0279 7a5e506215fc3c7d617e29697ca8233a 436 SUPERFAMILY SSF55874 281 431 3.54E-26 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_0279 7a5e506215fc3c7d617e29697ca8233a 436 Gene3D G3DSA:3.30.565.10 279 431 3.3E-25 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_0279 7a5e506215fc3c7d617e29697ca8233a 436 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 331 432 1.8E-15 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_0279 7a5e506215fc3c7d617e29697ca8233a 436 Gene3D G3DSA:1.10.287.130 167 278 2.8E-16 T 18-10-2018 SHALO_0010 c87727b52d968637e54c1df8eae51ad2 400 SUPERFAMILY SSF54631 275 391 1.05E-10 T 18-10-2018 SHALO_0010 c87727b52d968637e54c1df8eae51ad2 400 Gene3D G3DSA:3.40.50.300 1 269 8.8E-71 T 18-10-2018 SHALO_0010 c87727b52d968637e54c1df8eae51ad2 400 Pfam PF00571 CBS domain 344 392 0.0025 T 18-10-2018 IPR000644 CBS domain SHALO_0010 c87727b52d968637e54c1df8eae51ad2 400 Gene3D G3DSA:3.10.580.10 275 393 9.4E-9 T 18-10-2018 SHALO_0010 c87727b52d968637e54c1df8eae51ad2 400 ProSitePatterns PS00211 ABC transporters family signature. 166 180 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_0010 c87727b52d968637e54c1df8eae51ad2 400 Pfam PF00005 ABC transporter 46 193 2.3E-32 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_0010 c87727b52d968637e54c1df8eae51ad2 400 SUPERFAMILY SSF52540 41 270 5.66E-74 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0010 c87727b52d968637e54c1df8eae51ad2 400 SMART SM00382 54 251 1.8E-19 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_0010 c87727b52d968637e54c1df8eae51ad2 400 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 38 392 3.3E-148 T 18-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 SHALO_0804 7afed28eee21ab878a8cd37cb2da49d2 528 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 147 174 - T 18-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 SHALO_0804 7afed28eee21ab878a8cd37cb2da49d2 528 Pfam PF01842 ACT domain 457 518 1.8E-8 T 18-10-2018 IPR002912 ACT domain SHALO_0804 7afed28eee21ab878a8cd37cb2da49d2 528 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 284 1.3E-52 T 18-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 SHALO_0804 7afed28eee21ab878a8cd37cb2da49d2 528 SUPERFAMILY SSF55021 445 524 7.82E-15 T 18-10-2018 SHALO_0804 7afed28eee21ab878a8cd37cb2da49d2 528 SUPERFAMILY SSF52283 26 123 7.94E-31 T 18-10-2018 SHALO_0804 7afed28eee21ab878a8cd37cb2da49d2 528 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 6 316 3.1E-31 T 18-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 SHALO_0804 7afed28eee21ab878a8cd37cb2da49d2 528 SUPERFAMILY SSF143548 323 451 1.33E-31 T 18-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 SHALO_0804 7afed28eee21ab878a8cd37cb2da49d2 528 SUPERFAMILY SSF51735 103 285 3.49E-51 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_0804 7afed28eee21ab878a8cd37cb2da49d2 528 TIGRFAM TIGR01327 PGDH: phosphoglycerate dehydrogenase 5 526 4.0E-184 T 18-10-2018 IPR006236 D-3-phosphoglycerate dehydrogenase GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|Reactome: R-HSA-977347 SHALO_0804 7afed28eee21ab878a8cd37cb2da49d2 528 Gene3D G3DSA:3.30.70.260 453 525 2.0E-13 T 18-10-2018 SHALO_0804 7afed28eee21ab878a8cd37cb2da49d2 528 Gene3D G3DSA:3.40.50.720 6 295 1.9E-100 T 18-10-2018 SHALO_0804 7afed28eee21ab878a8cd37cb2da49d2 528 Gene3D G3DSA:3.40.50.720 96 286 1.9E-100 T 18-10-2018 SHALO_0804 7afed28eee21ab878a8cd37cb2da49d2 528 Gene3D G3DSA:3.30.1330.90 322 452 1.2E-31 T 18-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 SHALO_1993 a25f0e12242369235f3a6ceb0648bdba 989 SUPERFAMILY SSF52540 654 859 2.09E-41 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_1993 a25f0e12242369235f3a6ceb0648bdba 989 SUPERFAMILY SSF52540 398 655 9.23E-50 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_1993 a25f0e12242369235f3a6ceb0648bdba 989 Gene3D G3DSA:3.30.2060.10 102 188 2.9E-23 T 18-10-2018 SHALO_1993 a25f0e12242369235f3a6ceb0648bdba 989 Gene3D G3DSA:2.30.30.840 357 415 8.0E-195 T 18-10-2018 SHALO_1993 a25f0e12242369235f3a6ceb0648bdba 989 SUPERFAMILY SSF143517 867 966 3.14E-26 T 18-10-2018 IPR037235 TRCF-like, C-terminal domain SHALO_1993 a25f0e12242369235f3a6ceb0648bdba 989 SMART SM00490 699 782 4.4E-13 T 18-10-2018 IPR001650 Helicase, C-terminal SHALO_1993 a25f0e12242369235f3a6ceb0648bdba 989 SUPERFAMILY SSF141259 351 422 1.01E-19 T 18-10-2018 IPR036101 CarD-like/TRCF domain superfamily SHALO_1993 a25f0e12242369235f3a6ceb0648bdba 989 SUPERFAMILY SSF52540 27 260 1.18E-38 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_1993 a25f0e12242369235f3a6ceb0648bdba 989 Pfam PF03461 TRCF domain 876 967 4.6E-21 T 18-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 SHALO_1993 a25f0e12242369235f3a6ceb0648bdba 989 Pfam PF00270 DEAD/DEAH box helicase 479 636 3.7E-15 T 18-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SHALO_1993 a25f0e12242369235f3a6ceb0648bdba 989 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 311 946 2.2E-251 T 18-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 SHALO_1993 a25f0e12242369235f3a6ceb0648bdba 989 Pfam PF02559 CarD-like/TRCF domain 354 447 2.5E-22 T 18-10-2018 IPR003711 CarD-like/TRCF domain SHALO_1993 a25f0e12242369235f3a6ceb0648bdba 989 Gene3D G3DSA:3.90.1150.50 871 980 8.9E-23 T 18-10-2018 IPR037235 TRCF-like, C-terminal domain SHALO_1993 a25f0e12242369235f3a6ceb0648bdba 989 SMART SM00487 474 661 2.2E-27 T 18-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain SHALO_1993 a25f0e12242369235f3a6ceb0648bdba 989 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 10 969 23.612 T 18-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 SHALO_1993 a25f0e12242369235f3a6ceb0648bdba 989 SMART SM00982 875 975 3.7E-32 T 18-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 SHALO_1993 a25f0e12242369235f3a6ceb0648bdba 989 Gene3D G3DSA:3.40.50.300 416 653 8.0E-195 T 18-10-2018 SHALO_1993 a25f0e12242369235f3a6ceb0648bdba 989 Gene3D G3DSA:3.40.50.300 352 861 8.0E-195 T 18-10-2018 SHALO_1993 a25f0e12242369235f3a6ceb0648bdba 989 Pfam PF00271 Helicase conserved C-terminal domain 677 781 1.2E-14 T 18-10-2018 IPR001650 Helicase, C-terminal SHALO_1993 a25f0e12242369235f3a6ceb0648bdba 989 SMART SM01058 353 450 2.1E-38 T 18-10-2018 IPR003711 CarD-like/TRCF domain SHALO_0939 219e42289dc88cc8f762705d4b385734 364 Pfam PF05175 Methyltransferase small domain 175 299 7.9E-10 T 18-10-2018 IPR007848 Methyltransferase small domain GO:0008168 SHALO_0939 219e42289dc88cc8f762705d4b385734 364 Gene3D G3DSA:3.40.50.150 169 342 4.6E-22 T 18-10-2018 SHALO_0939 219e42289dc88cc8f762705d4b385734 364 SUPERFAMILY SSF53335 144 323 4.78E-23 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_0939 219e42289dc88cc8f762705d4b385734 364 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 248 254 - T 18-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SHALO_1156 beb70a53028fbc92fc7354e3fc8fec32 578 SMART SM00052 331 575 9.8E-50 T 18-10-2018 IPR001633 EAL domain SHALO_1156 beb70a53028fbc92fc7354e3fc8fec32 578 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 171 315 8.4E-16 T 18-10-2018 IPR000160 GGDEF domain SHALO_1156 beb70a53028fbc92fc7354e3fc8fec32 578 SUPERFAMILY SSF55073 176 315 1.65E-20 T 18-10-2018 IPR029787 Nucleotide cyclase SHALO_1156 beb70a53028fbc92fc7354e3fc8fec32 578 Gene3D G3DSA:3.40.50.2300 13 169 3.3E-32 T 18-10-2018 SHALO_1156 beb70a53028fbc92fc7354e3fc8fec32 578 Gene3D G3DSA:3.30.70.270 170 335 3.9E-22 T 18-10-2018 SHALO_1156 beb70a53028fbc92fc7354e3fc8fec32 578 Pfam PF00990 Diguanylate cyclase, GGDEF domain 172 315 2.0E-20 T 18-10-2018 IPR000160 GGDEF domain SHALO_1156 beb70a53028fbc92fc7354e3fc8fec32 578 SMART SM00267 158 323 1.5E-10 T 18-10-2018 IPR000160 GGDEF domain SHALO_1156 beb70a53028fbc92fc7354e3fc8fec32 578 Pfam PF00563 EAL domain 341 570 4.9E-59 T 18-10-2018 IPR001633 EAL domain SHALO_1156 beb70a53028fbc92fc7354e3fc8fec32 578 Gene3D G3DSA:3.20.20.450 336 577 1.8E-66 T 18-10-2018 IPR035919 EAL domain superfamily SHALO_1156 beb70a53028fbc92fc7354e3fc8fec32 578 SUPERFAMILY SSF141868 341 573 1.83E-62 T 18-10-2018 IPR035919 EAL domain superfamily SHALO_1156 beb70a53028fbc92fc7354e3fc8fec32 578 Pfam PF00072 Response regulator receiver domain 17 128 1.1E-24 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_1156 beb70a53028fbc92fc7354e3fc8fec32 578 SMART SM00448 15 128 7.3E-31 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_1156 beb70a53028fbc92fc7354e3fc8fec32 578 SUPERFAMILY SSF52172 13 157 5.83E-34 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_0129 767842f019cd2ec978455de5cb54a329 232 SMART SM00857 3 136 0.0025 T 18-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 SHALO_0129 767842f019cd2ec978455de5cb54a329 232 Pfam PF00239 Resolvase, N terminal domain 15 131 1.4E-8 T 18-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 SHALO_0129 767842f019cd2ec978455de5cb54a329 232 SUPERFAMILY SSF53041 11 131 8.37E-8 T 18-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 SHALO_0129 767842f019cd2ec978455de5cb54a329 232 Gene3D G3DSA:3.40.50.1390 7 147 7.7E-10 T 18-10-2018 SHALO_0837 19fcab78048c4f0a422667cb4f4229d8 419 SUPERFAMILY SSF53383 4 415 1.81E-66 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase SHALO_0837 19fcab78048c4f0a422667cb4f4229d8 419 Pfam PF00266 Aminotransferase class-V 16 406 3.5E-44 T 18-10-2018 IPR000192 Aminotransferase class V domain SHALO_0837 19fcab78048c4f0a422667cb4f4229d8 419 Gene3D G3DSA:3.40.640.10 24 264 5.2E-34 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 SHALO_0837 19fcab78048c4f0a422667cb4f4229d8 419 Gene3D G3DSA:3.90.1150.10 270 418 5.1E-29 T 18-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 SHALO_1596 fea422de992761310dc861582c0b299b 376 Pfam PF09626 Dihaem cytochrome c 246 365 1.3E-29 T 18-10-2018 IPR018588 Dihaem cytochrome c SHALO_1596 fea422de992761310dc861582c0b299b 376 Pfam PF01292 Prokaryotic cytochrome b561 10 187 5.8E-19 T 18-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 SHALO_1596 fea422de992761310dc861582c0b299b 376 SUPERFAMILY SSF81342 7 192 8.63E-23 T 18-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 SHALO_1596 fea422de992761310dc861582c0b299b 376 Gene3D G3DSA:1.20.950.20 1 177 4.2E-15 T 18-10-2018 SHALO_1895 ecac0e143665f75e11123af35c003c1e 868 SUPERFAMILY SSF55073 439 596 9.42E-52 T 18-10-2018 IPR029787 Nucleotide cyclase SHALO_1895 ecac0e143665f75e11123af35c003c1e 868 Gene3D G3DSA:3.30.450.20 293 432 5.1E-27 T 18-10-2018 SHALO_1895 ecac0e143665f75e11123af35c003c1e 868 Pfam PF03924 CHASE domain 110 196 1.4E-13 T 18-10-2018 IPR006189 CHASE domain SHALO_1895 ecac0e143665f75e11123af35c003c1e 868 SUPERFAMILY SSF55785 313 425 6.63E-20 T 18-10-2018 IPR035965 PAS domain superfamily SHALO_1895 ecac0e143665f75e11123af35c003c1e 868 SMART SM00267 423 594 4.1E-68 T 18-10-2018 IPR000160 GGDEF domain SHALO_1895 ecac0e143665f75e11123af35c003c1e 868 Pfam PF08448 PAS fold 314 425 6.2E-17 T 18-10-2018 IPR013656 PAS fold-4 SHALO_1895 ecac0e143665f75e11123af35c003c1e 868 Gene3D G3DSA:3.20.20.450 607 858 8.4E-98 T 18-10-2018 IPR035919 EAL domain superfamily SHALO_1895 ecac0e143665f75e11123af35c003c1e 868 SUPERFAMILY SSF141868 609 856 1.83E-90 T 18-10-2018 IPR035919 EAL domain superfamily SHALO_1895 ecac0e143665f75e11123af35c003c1e 868 Gene3D G3DSA:3.30.70.270 433 606 1.3E-60 T 18-10-2018 SHALO_1895 ecac0e143665f75e11123af35c003c1e 868 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 309 429 1.7E-14 T 18-10-2018 IPR000014 PAS domain SHALO_1895 ecac0e143665f75e11123af35c003c1e 868 Pfam PF00990 Diguanylate cyclase, GGDEF domain 435 590 6.7E-50 T 18-10-2018 IPR000160 GGDEF domain SHALO_1895 ecac0e143665f75e11123af35c003c1e 868 Pfam PF00563 EAL domain 610 845 4.4E-72 T 18-10-2018 IPR001633 EAL domain SHALO_1895 ecac0e143665f75e11123af35c003c1e 868 SMART SM00091 308 374 2.7E-9 T 18-10-2018 IPR000014 PAS domain SHALO_1895 ecac0e143665f75e11123af35c003c1e 868 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 431 592 6.9E-47 T 18-10-2018 IPR000160 GGDEF domain SHALO_1895 ecac0e143665f75e11123af35c003c1e 868 SMART SM01079 63 225 7.3E-26 T 18-10-2018 IPR006189 CHASE domain SHALO_1895 ecac0e143665f75e11123af35c003c1e 868 SMART SM00052 604 850 4.9E-115 T 18-10-2018 IPR001633 EAL domain SHALO_0393 d946007d90c2f4ecfcbe9145fa554407 597 Gene3D G3DSA:3.40.50.300 1 185 1.6E-71 T 18-10-2018 SHALO_0393 d946007d90c2f4ecfcbe9145fa554407 597 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 43 58 - T 18-10-2018 IPR031157 Tr-type G domain, conserved site SHALO_0393 d946007d90c2f4ecfcbe9145fa554407 597 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 7 173 3.9E-20 T 18-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 SHALO_0393 d946007d90c2f4ecfcbe9145fa554407 597 SUPERFAMILY SSF50447 166 289 9.86E-32 T 18-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily SHALO_0393 d946007d90c2f4ecfcbe9145fa554407 597 TIGRFAM TIGR01393 lepA: elongation factor 4 3 597 2.9E-294 T 18-10-2018 IPR006297 Elongation factor 4 GO:0005525 SHALO_0393 d946007d90c2f4ecfcbe9145fa554407 597 Gene3D G3DSA:3.30.70.2570 481 555 1.3E-30 T 18-10-2018 IPR038363 LepA, C-terminal domain superfamily SHALO_0393 d946007d90c2f4ecfcbe9145fa554407 597 Gene3D G3DSA:3.30.70.3380 369 480 4.2E-40 T 18-10-2018 SHALO_0393 d946007d90c2f4ecfcbe9145fa554407 597 Gene3D G3DSA:2.40.30.10 186 286 1.4E-27 T 18-10-2018 SHALO_0393 d946007d90c2f4ecfcbe9145fa554407 597 PRINTS PR00315 GTP-binding elongation factor signature 50 58 1.9E-15 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHALO_0393 d946007d90c2f4ecfcbe9145fa554407 597 PRINTS PR00315 GTP-binding elongation factor signature 126 135 1.9E-15 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHALO_0393 d946007d90c2f4ecfcbe9145fa554407 597 PRINTS PR00315 GTP-binding elongation factor signature 90 101 1.9E-15 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHALO_0393 d946007d90c2f4ecfcbe9145fa554407 597 PRINTS PR00315 GTP-binding elongation factor signature 74 84 1.9E-15 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHALO_0393 d946007d90c2f4ecfcbe9145fa554407 597 PRINTS PR00315 GTP-binding elongation factor signature 7 20 1.9E-15 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHALO_0393 d946007d90c2f4ecfcbe9145fa554407 597 Gene3D G3DSA:3.30.70.870 287 368 1.4E-34 T 18-10-2018 SHALO_0393 d946007d90c2f4ecfcbe9145fa554407 597 SUPERFAMILY SSF54980 400 495 7.67E-23 T 18-10-2018 IPR035647 EF-G domain III/V-like SHALO_0393 d946007d90c2f4ecfcbe9145fa554407 597 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 283.883 T 18-10-2018 IPR006297 Elongation factor 4 GO:0005525 SHALO_0393 d946007d90c2f4ecfcbe9145fa554407 597 SUPERFAMILY SSF52540 2 205 5.81E-57 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0393 d946007d90c2f4ecfcbe9145fa554407 597 Pfam PF03144 Elongation factor Tu domain 2 205 276 5.7E-13 T 18-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 SHALO_0393 d946007d90c2f4ecfcbe9145fa554407 597 Pfam PF00679 Elongation factor G C-terminus 400 485 9.1E-22 T 18-10-2018 IPR000640 Elongation factor EFG, domain V-like SHALO_0393 d946007d90c2f4ecfcbe9145fa554407 597 Pfam PF06421 GTP-binding protein LepA C-terminus 489 595 1.6E-46 T 18-10-2018 IPR013842 GTP-binding protein LepA, C-terminal SHALO_0393 d946007d90c2f4ecfcbe9145fa554407 597 Pfam PF00009 Elongation factor Tu GTP binding domain 3 181 7.0E-55 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHALO_0393 d946007d90c2f4ecfcbe9145fa554407 597 SUPERFAMILY SSF54980 295 371 1.26E-15 T 18-10-2018 IPR035647 EF-G domain III/V-like SHALO_1135 e1cbb9b336218e1ffc1c47ac3732c91a 135 SMART SM00732 2 98 2.3E-18 T 18-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 SHALO_1135 e1cbb9b336218e1ffc1c47ac3732c91a 135 Gene3D G3DSA:3.30.420.140 2 135 1.3E-26 T 18-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 SHALO_1135 e1cbb9b336218e1ffc1c47ac3732c91a 135 SUPERFAMILY SSF53098 4 129 3.03E-26 T 18-10-2018 IPR012337 Ribonuclease H-like superfamily SHALO_1135 e1cbb9b336218e1ffc1c47ac3732c91a 135 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 2 131 19.409 T 18-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 SHALO_1135 e1cbb9b336218e1ffc1c47ac3732c91a 135 Pfam PF03652 Holliday junction resolvase 4 128 8.5E-30 T 18-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 SHALO_1135 e1cbb9b336218e1ffc1c47ac3732c91a 135 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 7 128 9.3E-22 T 18-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 SHALO_2062 4f117d84445c3f0b475616eebb2c6a43 228 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 8 222 8.3E-46 T 18-10-2018 SHALO_2062 4f117d84445c3f0b475616eebb2c6a43 228 Gene3D G3DSA:3.40.50.720 2 226 2.8E-59 T 18-10-2018 SHALO_2062 4f117d84445c3f0b475616eebb2c6a43 228 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 123 151 - T 18-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SHALO_2062 4f117d84445c3f0b475616eebb2c6a43 228 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 6.9E-33 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_2062 4f117d84445c3f0b475616eebb2c6a43 228 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 205 6.9E-33 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_2062 4f117d84445c3f0b475616eebb2c6a43 228 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 66 77 6.9E-33 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_2062 4f117d84445c3f0b475616eebb2c6a43 228 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 173 6.9E-33 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_2062 4f117d84445c3f0b475616eebb2c6a43 228 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 155 6.9E-33 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_2062 4f117d84445c3f0b475616eebb2c6a43 228 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 110 126 6.9E-33 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_2062 4f117d84445c3f0b475616eebb2c6a43 228 SUPERFAMILY SSF51735 2 222 1.52E-55 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_2062 4f117d84445c3f0b475616eebb2c6a43 228 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 116 124 1.8E-9 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_2062 4f117d84445c3f0b475616eebb2c6a43 228 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 66 77 1.8E-9 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_2062 4f117d84445c3f0b475616eebb2c6a43 228 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 155 1.8E-9 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_0567 315428cab32341b2c493fe7a1925ccb6 634 SUPERFAMILY SSF56935 35 634 4.03E-33 T 18-10-2018 SHALO_0567 315428cab32341b2c493fe7a1925ccb6 634 Gene3D G3DSA:2.170.130.10 36 154 1.3E-9 T 18-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily SHALO_0567 315428cab32341b2c493fe7a1925ccb6 634 Pfam PF07715 TonB-dependent Receptor Plug Domain 42 141 1.5E-8 T 18-10-2018 IPR012910 TonB-dependent receptor, plug domain SHALO_0567 315428cab32341b2c493fe7a1925ccb6 634 Gene3D G3DSA:2.40.170.20 189 634 5.3E-12 T 18-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily SHALO_0567 315428cab32341b2c493fe7a1925ccb6 634 Pfam PF00593 TonB dependent receptor 225 632 7.3E-8 T 18-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel SHALO_0283 f342d848589ffb0e6a5fd9d77992c76f 330 Gene3D G3DSA:3.40.50.10800 87 329 3.1E-91 T 18-10-2018 SHALO_0283 f342d848589ffb0e6a5fd9d77992c76f 330 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 4 330 7.0E-102 T 18-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 SHALO_0283 f342d848589ffb0e6a5fd9d77992c76f 330 Gene3D G3DSA:3.40.50.10800 8 311 3.1E-91 T 18-10-2018 SHALO_0283 f342d848589ffb0e6a5fd9d77992c76f 330 Pfam PF02445 Quinolinate synthetase A protein 8 329 4.1E-97 T 18-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 SHALO_0283 f342d848589ffb0e6a5fd9d77992c76f 330 SUPERFAMILY SSF142754 6 330 1.44E-93 T 18-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 SHALO_0283 f342d848589ffb0e6a5fd9d77992c76f 330 Gene3D G3DSA:3.40.50.10800 197 281 3.1E-91 T 18-10-2018 SHALO_0418 a36fd74ce188eb2a7eb8f27e8c07905e 1196 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 473 491 - T 18-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_0418 a36fd74ce188eb2a7eb8f27e8c07905e 1196 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 340 358 8.3E-6 T 18-10-2018 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 SHALO_0418 a36fd74ce188eb2a7eb8f27e8c07905e 1196 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 996 1017 8.3E-6 T 18-10-2018 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 SHALO_0418 a36fd74ce188eb2a7eb8f27e8c07905e 1196 Pfam PF06594 Haemolysin-type calcium binding protein related domain 357 404 1.2E-10 T 18-10-2018 IPR010566 Haemolysin-type calcium binding-related SHALO_0418 a36fd74ce188eb2a7eb8f27e8c07905e 1196 Pfam PF06594 Haemolysin-type calcium binding protein related domain 532 577 1.2E-4 T 18-10-2018 IPR010566 Haemolysin-type calcium binding-related SHALO_0418 a36fd74ce188eb2a7eb8f27e8c07905e 1196 SUPERFAMILY SSF51120 1003 1135 2.62E-26 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_0418 a36fd74ce188eb2a7eb8f27e8c07905e 1196 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 464 482 - T 18-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_0418 a36fd74ce188eb2a7eb8f27e8c07905e 1196 Gene3D G3DSA:2.150.10.10 276 416 2.6E-12 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_0418 a36fd74ce188eb2a7eb8f27e8c07905e 1196 Gene3D G3DSA:2.150.10.10 1010 1168 8.8E-37 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_0418 a36fd74ce188eb2a7eb8f27e8c07905e 1196 Gene3D G3DSA:2.150.10.10 432 583 5.2E-29 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_0418 a36fd74ce188eb2a7eb8f27e8c07905e 1196 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 303 310 55.0 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_0418 a36fd74ce188eb2a7eb8f27e8c07905e 1196 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 432 446 2.5 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_0418 a36fd74ce188eb2a7eb8f27e8c07905e 1196 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 477 492 4.6 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_0418 a36fd74ce188eb2a7eb8f27e8c07905e 1196 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1031 1048 4.7E-4 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_0418 a36fd74ce188eb2a7eb8f27e8c07905e 1196 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 459 475 0.46 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_0418 a36fd74ce188eb2a7eb8f27e8c07905e 1196 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 960 976 1.0 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_0418 a36fd74ce188eb2a7eb8f27e8c07905e 1196 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1050 1065 0.0025 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_0418 a36fd74ce188eb2a7eb8f27e8c07905e 1196 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1004 1021 0.0025 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_0418 a36fd74ce188eb2a7eb8f27e8c07905e 1196 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 986 1003 0.0018 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_0418 a36fd74ce188eb2a7eb8f27e8c07905e 1196 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 602 642 9.4E-5 T 18-10-2018 IPR010221 VCBS repeat SHALO_0418 a36fd74ce188eb2a7eb8f27e8c07905e 1196 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1037 1055 - T 18-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_0418 a36fd74ce188eb2a7eb8f27e8c07905e 1196 Gene3D G3DSA:2.150.10.10 955 1009 3.9E-16 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_0418 a36fd74ce188eb2a7eb8f27e8c07905e 1196 SUPERFAMILY SSF51120 857 1021 1.96E-12 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_0418 a36fd74ce188eb2a7eb8f27e8c07905e 1196 PRINTS PR00313 NodO calcium binding signature 1059 1068 2.7E-10 T 18-10-2018 SHALO_0418 a36fd74ce188eb2a7eb8f27e8c07905e 1196 PRINTS PR00313 NodO calcium binding signature 1050 1058 2.7E-10 T 18-10-2018 SHALO_0418 a36fd74ce188eb2a7eb8f27e8c07905e 1196 PRINTS PR00313 NodO calcium binding signature 1032 1040 2.7E-10 T 18-10-2018 SHALO_0418 a36fd74ce188eb2a7eb8f27e8c07905e 1196 PRINTS PR00313 NodO calcium binding signature 993 1004 2.7E-10 T 18-10-2018 SHALO_0418 a36fd74ce188eb2a7eb8f27e8c07905e 1196 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1028 1046 - T 18-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_0418 a36fd74ce188eb2a7eb8f27e8c07905e 1196 SUPERFAMILY SSF51120 426 574 2.27E-24 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_2900 55674df27920054a22b6086263f568e5 186 SUPERFAMILY SSF51283 4 185 5.5E-52 T 18-10-2018 IPR036157 dUTPase-like superfamily SHALO_2900 55674df27920054a22b6086263f568e5 186 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 3 184 2.6E-56 T 18-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 SHALO_2900 55674df27920054a22b6086263f568e5 186 Hamap MF_00146 dCTP deaminase [dcd]. 1 184 29.289 T 18-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 SHALO_2900 55674df27920054a22b6086263f568e5 186 Pfam PF00692 dUTPase 78 180 2.1E-9 T 18-10-2018 IPR029054 dUTPase-like SHALO_2900 55674df27920054a22b6086263f568e5 186 Gene3D G3DSA:2.70.40.10 1 156 3.2E-52 T 18-10-2018 IPR036157 dUTPase-like superfamily SHALO_0294 6c45e0344d53763105bf09045374622d 125 Pfam PF02033 Ribosome-binding factor A 8 110 3.8E-13 T 18-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 SHALO_0294 6c45e0344d53763105bf09045374622d 125 SUPERFAMILY SSF89919 7 101 7.85E-16 T 18-10-2018 IPR023799 Ribosome-binding factor A domain superfamily SHALO_0294 6c45e0344d53763105bf09045374622d 125 Gene3D G3DSA:3.30.300.20 4 119 1.2E-14 T 18-10-2018 IPR015946 K homology domain-like, alpha/beta SHALO_0294 6c45e0344d53763105bf09045374622d 125 ProSitePatterns PS01319 Ribosome-binding factor A signature. 76 97 - T 18-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 SHALO_0294 6c45e0344d53763105bf09045374622d 125 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 5 115 7.5E-18 T 18-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 SHALO_0294 6c45e0344d53763105bf09045374622d 125 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 6 110 17.777 T 18-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 SHALO_0969 841dcddcceef6e23fe0c00c7257c21e0 230 Gene3D G3DSA:3.40.50.2300 6 136 4.9E-32 T 18-10-2018 SHALO_0969 841dcddcceef6e23fe0c00c7257c21e0 230 SMART SM00448 12 123 3.7E-25 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_0969 841dcddcceef6e23fe0c00c7257c21e0 230 SMART SM00862 157 227 8.7E-18 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_0969 841dcddcceef6e23fe0c00c7257c21e0 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 227 1.8E-15 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_0969 841dcddcceef6e23fe0c00c7257c21e0 230 Pfam PF00072 Response regulator receiver domain 14 123 1.1E-25 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_0969 841dcddcceef6e23fe0c00c7257c21e0 230 SUPERFAMILY SSF52172 11 181 1.71E-34 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_0969 841dcddcceef6e23fe0c00c7257c21e0 230 Gene3D G3DSA:1.10.10.10 142 229 8.2E-22 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_0122 5d8f5b31095460e858b2fb4421231cd7 149 TIGRFAM TIGR00077 lspA: signal peptidase II 13 142 1.3E-28 T 18-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 SHALO_0122 5d8f5b31095460e858b2fb4421231cd7 149 ProSitePatterns PS00855 Signal peptidases II signature. 91 103 - T 18-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 SHALO_0122 5d8f5b31095460e858b2fb4421231cd7 149 Pfam PF01252 Signal peptidase (SPase) II 14 141 5.2E-24 T 18-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 SHALO_0122 5d8f5b31095460e858b2fb4421231cd7 149 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 44 52 2.3E-13 T 18-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 SHALO_0122 5d8f5b31095460e858b2fb4421231cd7 149 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 88 103 2.3E-13 T 18-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 SHALO_0122 5d8f5b31095460e858b2fb4421231cd7 149 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 123 139 2.3E-13 T 18-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 SHALO_0122 5d8f5b31095460e858b2fb4421231cd7 149 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 3 148 12.521 T 18-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 SHALO_0040 9c532d425f984ce8d0b8fd080aa92eae 281 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 64 105 - T 18-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 SHALO_0040 9c532d425f984ce8d0b8fd080aa92eae 281 Gene3D G3DSA:1.10.10.60 61 116 4.7E-13 T 18-10-2018 SHALO_0040 9c532d425f984ce8d0b8fd080aa92eae 281 Pfam PF12833 Helix-turn-helix domain 33 109 1.3E-18 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_0040 9c532d425f984ce8d0b8fd080aa92eae 281 Gene3D G3DSA:3.20.80.10 121 281 1.3E-35 T 18-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily SHALO_0040 9c532d425f984ce8d0b8fd080aa92eae 281 Pfam PF06445 GyrI-like small molecule binding domain 122 280 1.1E-29 T 18-10-2018 IPR029442 GyrI-like small molecule binding domain SHALO_0040 9c532d425f984ce8d0b8fd080aa92eae 281 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 93 109 1.2E-6 T 18-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SHALO_0040 9c532d425f984ce8d0b8fd080aa92eae 281 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 78 93 1.2E-6 T 18-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SHALO_0040 9c532d425f984ce8d0b8fd080aa92eae 281 SUPERFAMILY SSF46689 64 109 1.12E-8 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SHALO_0040 9c532d425f984ce8d0b8fd080aa92eae 281 SUPERFAMILY SSF46689 11 60 2.63E-9 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SHALO_0040 9c532d425f984ce8d0b8fd080aa92eae 281 SUPERFAMILY SSF55136 122 280 1.43E-27 T 18-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily SHALO_0040 9c532d425f984ce8d0b8fd080aa92eae 281 SMART SM00342 27 109 2.3E-24 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_0040 9c532d425f984ce8d0b8fd080aa92eae 281 SMART SM00871 121 281 1.3E-29 T 18-10-2018 IPR010499 Bacterial transcription activator, effector binding SHALO_0040 9c532d425f984ce8d0b8fd080aa92eae 281 Gene3D G3DSA:1.10.10.60 1 60 6.8E-16 T 18-10-2018 SHALO_2957 ec93cb6246fdf721424fd8de3e70c9e0 478 PIRSF PIRSF038928 1 478 1.5E-221 T 18-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 SHALO_2957 ec93cb6246fdf721424fd8de3e70c9e0 478 SMART SM01060 9 392 5.5E-276 T 18-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 SHALO_2957 ec93cb6246fdf721424fd8de3e70c9e0 478 PRINTS PR00067 Catalase signature 105 122 3.8E-69 T 18-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 SHALO_2957 ec93cb6246fdf721424fd8de3e70c9e0 478 PRINTS PR00067 Catalase signature 289 316 3.8E-69 T 18-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 SHALO_2957 ec93cb6246fdf721424fd8de3e70c9e0 478 PRINTS PR00067 Catalase signature 124 142 3.8E-69 T 18-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 SHALO_2957 ec93cb6246fdf721424fd8de3e70c9e0 478 PRINTS PR00067 Catalase signature 22 45 3.8E-69 T 18-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 SHALO_2957 ec93cb6246fdf721424fd8de3e70c9e0 478 PRINTS PR00067 Catalase signature 84 102 3.8E-69 T 18-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 SHALO_2957 ec93cb6246fdf721424fd8de3e70c9e0 478 PRINTS PR00067 Catalase signature 321 347 3.8E-69 T 18-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 SHALO_2957 ec93cb6246fdf721424fd8de3e70c9e0 478 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 334 342 - T 18-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 SHALO_2957 ec93cb6246fdf721424fd8de3e70c9e0 478 Pfam PF06628 Catalase-related immune-responsive 417 476 4.2E-21 T 18-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 SHALO_2957 ec93cb6246fdf721424fd8de3e70c9e0 478 SUPERFAMILY SSF56634 3 477 3.4E-201 T 18-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 SHALO_2957 ec93cb6246fdf721424fd8de3e70c9e0 478 Gene3D G3DSA:2.40.180.10 4 478 5.8E-213 T 18-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SHALO_2957 ec93cb6246fdf721424fd8de3e70c9e0 478 Pfam PF00199 Catalase 9 389 2.6E-183 T 18-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 SHALO_0001 4b2cf63203c17d6290037caa4aac6711 441 ProSitePatterns PS01008 DnaA protein signature. 396 415 - T 18-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 SHALO_0001 4b2cf63203c17d6290037caa4aac6711 441 SUPERFAMILY SSF48295 334 436 4.97E-29 T 18-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 SHALO_0001 4b2cf63203c17d6290037caa4aac6711 441 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 1 437 29.761 T 18-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 SHALO_0001 4b2cf63203c17d6290037caa4aac6711 441 Gene3D G3DSA:1.10.1750.10 338 441 5.1E-27 T 18-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 SHALO_0001 4b2cf63203c17d6290037caa4aac6711 441 SMART SM00760 346 415 2.7E-30 T 18-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 SHALO_0001 4b2cf63203c17d6290037caa4aac6711 441 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 234 261 7.7E-42 T 18-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like SHALO_0001 4b2cf63203c17d6290037caa4aac6711 441 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 168 182 7.7E-42 T 18-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like SHALO_0001 4b2cf63203c17d6290037caa4aac6711 441 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 200 214 7.7E-42 T 18-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like SHALO_0001 4b2cf63203c17d6290037caa4aac6711 441 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 138 158 7.7E-42 T 18-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like SHALO_0001 4b2cf63203c17d6290037caa4aac6711 441 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 396 415 7.7E-42 T 18-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like SHALO_0001 4b2cf63203c17d6290037caa4aac6711 441 Gene3D G3DSA:3.40.50.300 88 266 2.0E-52 T 18-10-2018 SHALO_0001 4b2cf63203c17d6290037caa4aac6711 441 SMART SM00382 137 263 2.5E-9 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_0001 4b2cf63203c17d6290037caa4aac6711 441 Pfam PF00308 Bacterial dnaA protein 105 319 1.6E-85 T 18-10-2018 IPR013317 Chromosomal replication initiator protein DnaA SHALO_0001 4b2cf63203c17d6290037caa4aac6711 441 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 348 415 6.0E-23 T 18-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 SHALO_0001 4b2cf63203c17d6290037caa4aac6711 441 SUPERFAMILY SSF52540 106 311 6.11E-44 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0001 4b2cf63203c17d6290037caa4aac6711 441 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 5 436 4.2E-152 T 18-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 SHALO_0001 4b2cf63203c17d6290037caa4aac6711 441 Gene3D G3DSA:1.10.8.60 269 337 6.2E-22 T 18-10-2018 SHALO_0001 4b2cf63203c17d6290037caa4aac6711 441 Gene3D G3DSA:3.30.300.180 2 79 6.0E-17 T 18-10-2018 IPR038454 DnaA, N-terminal domain superfamily SHALO_0001 4b2cf63203c17d6290037caa4aac6711 441 Pfam PF11638 DnaA N-terminal domain 5 64 3.8E-11 T 18-10-2018 IPR024633 DnaA N-terminal domain SHALO_1509 8c6effb9a154ee09efdfbdb90607982a 183 PIRSF PIRSF006135 1 183 1.0E-58 T 18-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 SHALO_1509 8c6effb9a154ee09efdfbdb90607982a 183 SUPERFAMILY SSF52540 2 183 2.26E-50 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_1509 8c6effb9a154ee09efdfbdb90607982a 183 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 3 182 5.4E-57 T 18-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 SHALO_1509 8c6effb9a154ee09efdfbdb90607982a 183 Gene3D G3DSA:3.40.50.300 2 183 4.9E-59 T 18-10-2018 SHALO_0085 7f11aa45db5793655a95575c0001ee33 212 Pfam PF01914 MarC family integral membrane protein 6 205 4.1E-45 T 18-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 SHALO_0085 7f11aa45db5793655a95575c0001ee33 212 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 5 204 1.0E-43 T 18-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 SHALO_0556 b72b23bf32a9e1c3eec56a4d7fe849c0 263 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 1 223 1.3E-109 T 18-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_0556 b72b23bf32a9e1c3eec56a4d7fe849c0 263 Gene3D G3DSA:3.40.50.10490 8 213 2.1E-89 T 18-10-2018 SHALO_0556 b72b23bf32a9e1c3eec56a4d7fe849c0 263 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 4 15 - T 18-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 SHALO_0556 b72b23bf32a9e1c3eec56a4d7fe849c0 263 PRINTS PR00395 Ribosomal protein S2 signature 35 44 1.5E-36 T 18-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_0556 b72b23bf32a9e1c3eec56a4d7fe849c0 263 PRINTS PR00395 Ribosomal protein S2 signature 156 173 1.5E-36 T 18-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_0556 b72b23bf32a9e1c3eec56a4d7fe849c0 263 PRINTS PR00395 Ribosomal protein S2 signature 4 22 1.5E-36 T 18-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_0556 b72b23bf32a9e1c3eec56a4d7fe849c0 263 PRINTS PR00395 Ribosomal protein S2 signature 85 102 1.5E-36 T 18-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_0556 b72b23bf32a9e1c3eec56a4d7fe849c0 263 PRINTS PR00395 Ribosomal protein S2 signature 173 184 1.5E-36 T 18-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_0556 b72b23bf32a9e1c3eec56a4d7fe849c0 263 PRINTS PR00395 Ribosomal protein S2 signature 194 208 1.5E-36 T 18-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_0556 b72b23bf32a9e1c3eec56a4d7fe849c0 263 Pfam PF00318 Ribosomal protein S2 7 222 1.7E-94 T 18-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_0556 b72b23bf32a9e1c3eec56a4d7fe849c0 263 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 1 223 40.177 T 18-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_0556 b72b23bf32a9e1c3eec56a4d7fe849c0 263 SUPERFAMILY SSF52313 4 231 4.58E-94 T 18-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily SHALO_0556 b72b23bf32a9e1c3eec56a4d7fe849c0 263 Gene3D G3DSA:1.10.287.610 95 150 2.1E-89 T 18-10-2018 SHALO_1792 a5066aef9df612a694b919fcba06c725 458 Pfam PF14450 Cell division protein FtsA 7 190 6.4E-11 T 18-10-2018 SHALO_1792 a5066aef9df612a694b919fcba06c725 458 SMART SM00842 5 192 9.8E-86 T 18-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 SHALO_1792 a5066aef9df612a694b919fcba06c725 458 PIRSF PIRSF003101 1 456 1.2E-111 T 18-10-2018 IPR020823 Cell division protein FtsA SHALO_1792 a5066aef9df612a694b919fcba06c725 458 Gene3D G3DSA:3.30.1490.110 80 165 3.6E-101 T 18-10-2018 SHALO_1792 a5066aef9df612a694b919fcba06c725 458 SUPERFAMILY SSF53067 195 373 1.12E-36 T 18-10-2018 SHALO_1792 a5066aef9df612a694b919fcba06c725 458 Pfam PF02491 SHS2 domain inserted in FTSA 80 158 3.2E-24 T 18-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 SHALO_1792 a5066aef9df612a694b919fcba06c725 458 SUPERFAMILY SSF53067 4 211 3.97E-51 T 18-10-2018 SHALO_1792 a5066aef9df612a694b919fcba06c725 458 Gene3D G3DSA:3.90.640.10 231 294 3.6E-101 T 18-10-2018 SHALO_1792 a5066aef9df612a694b919fcba06c725 458 Gene3D G3DSA:3.30.420.40 193 347 3.6E-101 T 18-10-2018 SHALO_1792 a5066aef9df612a694b919fcba06c725 458 Hamap MF_02033 Cell division protein FtsA [ftsA]. 1 458 27.536 T 18-10-2018 IPR020823 Cell division protein FtsA SHALO_1792 a5066aef9df612a694b919fcba06c725 458 Gene3D G3DSA:3.30.420.40 8 367 3.6E-101 T 18-10-2018 SHALO_1792 a5066aef9df612a694b919fcba06c725 458 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 5 373 4.7E-132 T 18-10-2018 IPR020823 Cell division protein FtsA SHALO_1792 a5066aef9df612a694b919fcba06c725 458 Pfam PF14450 Cell division protein FtsA 203 369 1.3E-19 T 18-10-2018 SHALO_1098 d336a8980a30fdfcfa811e5c01b344f1 185 Gene3D G3DSA:3.40.50.2020 2 184 5.5E-58 T 18-10-2018 SHALO_1098 d336a8980a30fdfcfa811e5c01b344f1 185 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 12 184 32.918 T 18-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 SHALO_1098 d336a8980a30fdfcfa811e5c01b344f1 185 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 12 183 8.2E-63 T 18-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 SHALO_1098 d336a8980a30fdfcfa811e5c01b344f1 185 SUPERFAMILY SSF53271 15 168 1.7E-42 T 18-10-2018 IPR029057 Phosphoribosyltransferase-like SHALO_1098 d336a8980a30fdfcfa811e5c01b344f1 185 Pfam PF00156 Phosphoribosyl transferase domain 51 161 7.0E-15 T 18-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 SHALO_0696 39fb01e252a5156a2eb8ff932d0aed19 1474 Pfam PF04898 Glutamate synthase central domain 452 736 2.2E-89 T 18-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 SHALO_0696 39fb01e252a5156a2eb8ff932d0aed19 1474 Pfam PF01645 Conserved region in glutamate synthase 799 1160 3.4E-146 T 18-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 SHALO_0696 39fb01e252a5156a2eb8ff932d0aed19 1474 SUPERFAMILY SSF56235 11 424 7.14E-132 T 18-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal SHALO_0696 39fb01e252a5156a2eb8ff932d0aed19 1474 SUPERFAMILY SSF69336 1213 1466 4.05E-84 T 18-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 SHALO_0696 39fb01e252a5156a2eb8ff932d0aed19 1474 Gene3D G3DSA:3.20.20.70 477 1175 0.0 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_0696 39fb01e252a5156a2eb8ff932d0aed19 1474 Pfam PF00310 Glutamine amidotransferases class-II 11 421 2.6E-151 T 18-10-2018 IPR017932 Glutamine amidotransferase type 2 domain SHALO_0696 39fb01e252a5156a2eb8ff932d0aed19 1474 Gene3D G3DSA:3.60.20.10 11 539 0.0 T 18-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal SHALO_0696 39fb01e252a5156a2eb8ff932d0aed19 1474 Gene3D G3DSA:3.20.20.70 426 797 0.0 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_0696 39fb01e252a5156a2eb8ff932d0aed19 1474 Gene3D G3DSA:2.160.20.60 1208 1472 1.2E-98 T 18-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 SHALO_0696 39fb01e252a5156a2eb8ff932d0aed19 1474 SUPERFAMILY SSF51395 445 1184 2.75E-226 T 18-10-2018 SHALO_0696 39fb01e252a5156a2eb8ff932d0aed19 1474 Pfam PF01493 GXGXG motif 1236 1418 1.1E-74 T 18-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 SHALO_0725 165d39f377c630237b139857b9e69173 905 SUPERFAMILY SSF56672 503 905 8.89E-133 T 18-10-2018 SHALO_0725 165d39f377c630237b139857b9e69173 905 Gene3D G3DSA:1.10.150.20 692 831 1.4E-96 T 18-10-2018 SHALO_0725 165d39f377c630237b139857b9e69173 905 Pfam PF00476 DNA polymerase family A 535 903 1.1E-133 T 18-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHALO_0725 165d39f377c630237b139857b9e69173 905 Gene3D G3DSA:3.30.70.370 645 901 1.4E-96 T 18-10-2018 SHALO_0725 165d39f377c630237b139857b9e69173 905 PRINTS PR00868 DNA-polymerase family A (pol I) signature 793 804 3.1E-67 T 18-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHALO_0725 165d39f377c630237b139857b9e69173 905 PRINTS PR00868 DNA-polymerase family A (pol I) signature 661 676 3.1E-67 T 18-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHALO_0725 165d39f377c630237b139857b9e69173 905 PRINTS PR00868 DNA-polymerase family A (pol I) signature 824 840 3.1E-67 T 18-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHALO_0725 165d39f377c630237b139857b9e69173 905 PRINTS PR00868 DNA-polymerase family A (pol I) signature 638 660 3.1E-67 T 18-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHALO_0725 165d39f377c630237b139857b9e69173 905 PRINTS PR00868 DNA-polymerase family A (pol I) signature 852 865 3.1E-67 T 18-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHALO_0725 165d39f377c630237b139857b9e69173 905 PRINTS PR00868 DNA-polymerase family A (pol I) signature 713 726 3.1E-67 T 18-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHALO_0725 165d39f377c630237b139857b9e69173 905 PRINTS PR00868 DNA-polymerase family A (pol I) signature 734 759 3.1E-67 T 18-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHALO_0725 165d39f377c630237b139857b9e69173 905 PRINTS PR00868 DNA-polymerase family A (pol I) signature 683 706 3.1E-67 T 18-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHALO_0725 165d39f377c630237b139857b9e69173 905 PRINTS PR00868 DNA-polymerase family A (pol I) signature 771 782 3.1E-67 T 18-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHALO_0725 165d39f377c630237b139857b9e69173 905 SMART SM00475 21 278 3.4E-100 T 18-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 SHALO_0725 165d39f377c630237b139857b9e69173 905 Pfam PF01612 3'-5' exonuclease 330 502 2.6E-32 T 18-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 SHALO_0725 165d39f377c630237b139857b9e69173 905 TIGRFAM TIGR00593 pola: DNA polymerase I 24 905 6.2E-270 T 18-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHALO_0725 165d39f377c630237b139857b9e69173 905 SMART SM00482 669 869 2.6E-82 T 18-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHALO_0725 165d39f377c630237b139857b9e69173 905 Gene3D G3DSA:1.10.150.20 190 263 9.8E-83 T 18-10-2018 SHALO_0725 165d39f377c630237b139857b9e69173 905 Gene3D G3DSA:3.30.420.10 322 525 2.1E-57 T 18-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 SHALO_0725 165d39f377c630237b139857b9e69173 905 SUPERFAMILY SSF47807 186 277 7.78E-25 T 18-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily SHALO_0725 165d39f377c630237b139857b9e69173 905 SUPERFAMILY SSF88723 20 186 2.88E-47 T 18-10-2018 IPR029060 PIN-like domain superfamily SHALO_0725 165d39f377c630237b139857b9e69173 905 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 187 277 1.6E-25 T 18-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 SHALO_0725 165d39f377c630237b139857b9e69173 905 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 24 186 5.9E-44 T 18-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 SHALO_0725 165d39f377c630237b139857b9e69173 905 ProSitePatterns PS00447 DNA polymerase family A signature. 734 753 - T 18-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHALO_0725 165d39f377c630237b139857b9e69173 905 Gene3D G3DSA:1.20.1060.10 526 641 9.7E-37 T 18-10-2018 SHALO_0725 165d39f377c630237b139857b9e69173 905 SMART SM00474 315 502 2.1E-29 T 18-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 SHALO_0725 165d39f377c630237b139857b9e69173 905 SUPERFAMILY SSF53098 322 502 1.49E-38 T 18-10-2018 IPR012337 Ribonuclease H-like superfamily SHALO_0725 165d39f377c630237b139857b9e69173 905 Gene3D G3DSA:3.40.50.1010 25 282 9.8E-83 T 18-10-2018 SHALO_0725 165d39f377c630237b139857b9e69173 905 SMART SM00279 189 224 1.2E-11 T 18-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 SHALO_0089 709041a47ec4082c6b31de9adec6635e 546 Gene3D G3DSA:3.40.50.300 1 287 5.3E-125 T 18-10-2018 SHALO_0089 709041a47ec4082c6b31de9adec6635e 546 Hamap MF_01227 CTP synthase [pyrG]. 6 543 49.59 T 18-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 SHALO_0089 709041a47ec4082c6b31de9adec6635e 546 Pfam PF06418 CTP synthase N-terminus 7 269 5.4E-121 T 18-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 SHALO_0089 709041a47ec4082c6b31de9adec6635e 546 Gene3D G3DSA:3.40.50.880 288 546 1.9E-96 T 18-10-2018 IPR029062 Class I glutamine amidotransferase-like SHALO_0089 709041a47ec4082c6b31de9adec6635e 546 SUPERFAMILY SSF52317 291 540 1.91E-72 T 18-10-2018 IPR029062 Class I glutamine amidotransferase-like SHALO_0089 709041a47ec4082c6b31de9adec6635e 546 TIGRFAM TIGR00337 PyrG: CTP synthase 5 538 1.0E-235 T 18-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 SHALO_0089 709041a47ec4082c6b31de9adec6635e 546 Pfam PF00117 Glutamine amidotransferase class-I 304 536 7.6E-52 T 18-10-2018 IPR017926 Glutamine amidotransferase SHALO_0089 709041a47ec4082c6b31de9adec6635e 546 SUPERFAMILY SSF52540 6 271 2.95E-116 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0787 7c98ea2c70e123995fb66840b0567f03 728 PRINTS PR00344 Bacterial sensor protein C-terminal signature 654 668 1.1E-6 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_0787 7c98ea2c70e123995fb66840b0567f03 728 PRINTS PR00344 Bacterial sensor protein C-terminal signature 683 701 1.1E-6 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_0787 7c98ea2c70e123995fb66840b0567f03 728 PRINTS PR00344 Bacterial sensor protein C-terminal signature 672 682 1.1E-6 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_0787 7c98ea2c70e123995fb66840b0567f03 728 Gene3D G3DSA:3.40.50.2300 141 301 1.3E-15 T 18-10-2018 SHALO_0787 7c98ea2c70e123995fb66840b0567f03 728 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 372 492 4.4E-8 T 18-10-2018 IPR000014 PAS domain SHALO_0787 7c98ea2c70e123995fb66840b0567f03 728 Gene3D G3DSA:3.40.50.2300 86 295 1.3E-15 T 18-10-2018 SHALO_0787 7c98ea2c70e123995fb66840b0567f03 728 Gene3D G3DSA:1.10.287.130 490 569 5.1E-11 T 18-10-2018 SHALO_0787 7c98ea2c70e123995fb66840b0567f03 728 SMART SM00387 614 722 1.2E-16 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_0787 7c98ea2c70e123995fb66840b0567f03 728 SUPERFAMILY SSF55785 360 484 4.01E-16 T 18-10-2018 IPR035965 PAS domain superfamily SHALO_0787 7c98ea2c70e123995fb66840b0567f03 728 Gene3D G3DSA:3.30.565.10 573 725 4.1E-29 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_0787 7c98ea2c70e123995fb66840b0567f03 728 Gene3D G3DSA:3.30.450.20 359 489 3.0E-18 T 18-10-2018 SHALO_0787 7c98ea2c70e123995fb66840b0567f03 728 SMART SM00091 372 439 1.8E-6 T 18-10-2018 IPR000014 PAS domain SHALO_0787 7c98ea2c70e123995fb66840b0567f03 728 Pfam PF08448 PAS fold 378 487 1.7E-10 T 18-10-2018 IPR013656 PAS fold-4 SHALO_0787 7c98ea2c70e123995fb66840b0567f03 728 SUPERFAMILY SSF55874 584 721 1.51E-22 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_0787 7c98ea2c70e123995fb66840b0567f03 728 Pfam PF04392 ABC transporter substrate binding protein 82 294 2.0E-8 T 18-10-2018 IPR007487 ABC transporter, substrate-binding protein SHALO_0787 7c98ea2c70e123995fb66840b0567f03 728 SUPERFAMILY SSF47384 495 570 8.83E-5 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SHALO_0787 7c98ea2c70e123995fb66840b0567f03 728 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 616 718 5.4E-15 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_2938 8a4f17da45f9de91052ca88f4a8381cf 257 SUPERFAMILY SSF56194 172 257 2.75E-28 T 18-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 SHALO_2938 8a4f17da45f9de91052ca88f4a8381cf 257 SUPERFAMILY SSF56176 32 173 1.69E-17 T 18-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 SHALO_2938 8a4f17da45f9de91052ca88f4a8381cf 257 Gene3D G3DSA:3.90.78.10 178 257 1.6E-28 T 18-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 SHALO_2938 8a4f17da45f9de91052ca88f4a8381cf 257 Gene3D G3DSA:3.30.465.10 61 177 2.1E-15 T 18-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 SHALO_2938 8a4f17da45f9de91052ca88f4a8381cf 257 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 257 43.019 T 18-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 SHALO_2938 8a4f17da45f9de91052ca88f4a8381cf 257 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 171 256 4.1E-25 T 18-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 SHALO_1782 e5d54d33de788a9f7ecc8aac6cee0db1 186 Hamap MF_00269 Thiol peroxidase [tpx]. 9 172 33.685 T 18-10-2018 IPR002065 Thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 KEGG: 00480+1.11.1.15 SHALO_1782 e5d54d33de788a9f7ecc8aac6cee0db1 186 ProSitePatterns PS01265 Tpx family signature. 89 100 - T 18-10-2018 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 KEGG: 00480+1.11.1.15 SHALO_1782 e5d54d33de788a9f7ecc8aac6cee0db1 186 SUPERFAMILY SSF52833 10 169 1.83E-35 T 18-10-2018 IPR036249 Thioredoxin-like superfamily SHALO_1782 e5d54d33de788a9f7ecc8aac6cee0db1 186 Gene3D G3DSA:3.40.30.10 5 174 1.1E-39 T 18-10-2018 SHALO_1782 e5d54d33de788a9f7ecc8aac6cee0db1 186 Pfam PF08534 Redoxin 26 168 4.6E-18 T 18-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 SHALO_2861 6d99e1a723b242236d04a86a1158f6f2 339 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 1 338 34.738 T 18-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 SHALO_2861 6d99e1a723b242236d04a86a1158f6f2 339 Gene3D G3DSA:2.30.30.280 203 263 6.4E-18 T 18-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 SHALO_2861 6d99e1a723b242236d04a86a1158f6f2 339 SUPERFAMILY SSF52402 1 232 2.03E-41 T 18-10-2018 SHALO_2861 6d99e1a723b242236d04a86a1158f6f2 339 Gene3D G3DSA:2.40.30.10 265 339 2.9E-11 T 18-10-2018 SHALO_2861 6d99e1a723b242236d04a86a1158f6f2 339 Pfam PF03054 tRNA methyl transferase 1 337 1.3E-103 T 18-10-2018 SHALO_2861 6d99e1a723b242236d04a86a1158f6f2 339 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1 337 4.7E-106 T 18-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 SHALO_2861 6d99e1a723b242236d04a86a1158f6f2 339 Gene3D G3DSA:3.40.50.620 1 198 9.1E-60 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_2499 a41e9ff9926bc4bde1a5ece3b91b01e0 216 Pfam PF07290 Protein of unknown function (DUF1449) 11 207 3.6E-58 T 18-10-2018 IPR010840 Protein of unknown function DUF1449 SHALO_0808 f5852fa045695992e7651c74772d055c 551 SUPERFAMILY SSF82866 365 545 5.89E-34 T 18-10-2018 SHALO_0808 f5852fa045695992e7651c74772d055c 551 Gene3D G3DSA:1.20.1640.10 16 544 5.2E-77 T 18-10-2018 SHALO_0808 f5852fa045695992e7651c74772d055c 551 Gene3D G3DSA:3.30.2090.10 212 310 5.2E-77 T 18-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SHALO_0808 f5852fa045695992e7651c74772d055c 551 Gene3D G3DSA:3.30.70.1430 51 159 5.2E-77 T 18-10-2018 SHALO_0808 f5852fa045695992e7651c74772d055c 551 SUPERFAMILY SSF82693 52 152 1.52E-7 T 18-10-2018 SHALO_0808 f5852fa045695992e7651c74772d055c 551 Gene3D G3DSA:3.30.70.1440 161 387 5.2E-77 T 18-10-2018 SHALO_0808 f5852fa045695992e7651c74772d055c 551 Pfam PF00873 AcrB/AcrD/AcrF family 16 544 1.3E-43 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SHALO_1178 89b26ea3d2d65419396127895e9a17de 208 Gene3D G3DSA:3.40.50.300 1 208 1.5E-58 T 18-10-2018 SHALO_1178 89b26ea3d2d65419396127895e9a17de 208 Pfam PF00005 ABC transporter 18 158 2.3E-30 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_1178 89b26ea3d2d65419396127895e9a17de 208 SMART SM00382 27 206 7.6E-14 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_1178 89b26ea3d2d65419396127895e9a17de 208 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_1178 89b26ea3d2d65419396127895e9a17de 208 SUPERFAMILY SSF52540 2 207 6.14E-55 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_1268 be8d61a3cd32bbb91c608eedb0662ba4 517 ProSitePatterns PS00090 Nitrogenases component 1 alpha and beta subunits signature 2. 152 166 - T 18-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 SHALO_1268 be8d61a3cd32bbb91c608eedb0662ba4 517 TIGRFAM TIGR01286 nifK: nitrogenase molybdenum-iron protein beta chain 2 517 9.5E-228 T 18-10-2018 IPR005976 Nitrogenase molybdenum-iron protein beta chain GO:0009399|GO:0016163|GO:0016612|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 SHALO_1268 be8d61a3cd32bbb91c608eedb0662ba4 517 Pfam PF11844 Domain of unknown function (DUF3364) 2 57 2.5E-20 T 18-10-2018 IPR024564 Nitrogenase molybdenum-iron protein beta chain, N-terminal KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 SHALO_1268 be8d61a3cd32bbb91c608eedb0662ba4 517 Gene3D G3DSA:3.40.50.1980 60 478 3.3E-162 T 18-10-2018 SHALO_1268 be8d61a3cd32bbb91c608eedb0662ba4 517 Gene3D G3DSA:1.20.89.10 321 501 3.3E-162 T 18-10-2018 SHALO_1268 be8d61a3cd32bbb91c608eedb0662ba4 517 SUPERFAMILY SSF53807 4 516 1.31E-149 T 18-10-2018 SHALO_1268 be8d61a3cd32bbb91c608eedb0662ba4 517 Gene3D G3DSA:3.40.50.1980 215 485 3.3E-162 T 18-10-2018 SHALO_1268 be8d61a3cd32bbb91c608eedb0662ba4 517 Gene3D G3DSA:3.40.50.1980 71 212 3.3E-162 T 18-10-2018 SHALO_1268 be8d61a3cd32bbb91c608eedb0662ba4 517 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 71 495 7.0E-118 T 18-10-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 SHALO_0232 4b9eb51be31198a7238b2f2d2e66d804 410 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 4 401 2.1E-185 T 18-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 SHALO_0232 4b9eb51be31198a7238b2f2d2e66d804 410 Gene3D G3DSA:3.40.50.300 52 307 6.7E-106 T 18-10-2018 SHALO_0232 4b9eb51be31198a7238b2f2d2e66d804 410 SUPERFAMILY SSF52540 58 394 7.83E-73 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0232 4b9eb51be31198a7238b2f2d2e66d804 410 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 310 380 9.7E-15 T 18-10-2018 IPR019489 Clp ATPase, C-terminal SHALO_0232 4b9eb51be31198a7238b2f2d2e66d804 410 SMART SM01086 309 403 1.0E-31 T 18-10-2018 IPR019489 Clp ATPase, C-terminal SHALO_0232 4b9eb51be31198a7238b2f2d2e66d804 410 SMART SM00994 3 42 8.7E-14 T 18-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 SHALO_0232 4b9eb51be31198a7238b2f2d2e66d804 410 Pfam PF06689 ClpX C4-type zinc finger 5 39 2.3E-11 T 18-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 SHALO_0232 4b9eb51be31198a7238b2f2d2e66d804 410 Gene3D G3DSA:3.30.50.30 3 43 2.6E-9 T 18-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily SHALO_0232 4b9eb51be31198a7238b2f2d2e66d804 410 Gene3D G3DSA:1.10.8.60 308 410 6.5E-39 T 18-10-2018 SHALO_0232 4b9eb51be31198a7238b2f2d2e66d804 410 SUPERFAMILY SSF57716 5 38 8.55E-8 T 18-10-2018 SHALO_0232 4b9eb51be31198a7238b2f2d2e66d804 410 Pfam PF07724 AAA domain (Cdc48 subfamily) 108 302 3.2E-47 T 18-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 SHALO_0232 4b9eb51be31198a7238b2f2d2e66d804 410 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 406 48.02 T 18-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 SHALO_0232 4b9eb51be31198a7238b2f2d2e66d804 410 SMART SM00382 107 269 8.0E-13 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_0799 473bc5e7562d5eb782be393501edbd00 779 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 773 31.394 T 18-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 SHALO_0799 473bc5e7562d5eb782be393501edbd00 779 Gene3D G3DSA:3.30.56.10 392 466 4.3E-17 T 18-10-2018 SHALO_0799 473bc5e7562d5eb782be393501edbd00 779 Pfam PF01588 Putative tRNA binding domain 45 139 1.1E-24 T 18-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 SHALO_0799 473bc5e7562d5eb782be393501edbd00 779 SUPERFAMILY SSF55681 459 677 1.39E-25 T 18-10-2018 SHALO_0799 473bc5e7562d5eb782be393501edbd00 779 Gene3D G3DSA:3.30.70.380 688 779 9.8E-17 T 18-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 SHALO_0799 473bc5e7562d5eb782be393501edbd00 779 SUPERFAMILY SSF50249 44 193 5.63E-44 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold SHALO_0799 473bc5e7562d5eb782be393501edbd00 779 SMART SM00874 393 463 4.6E-16 T 18-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 SHALO_0799 473bc5e7562d5eb782be393501edbd00 779 Gene3D G3DSA:3.30.56.10 6 182 2.2E-65 T 18-10-2018 SHALO_0799 473bc5e7562d5eb782be393501edbd00 779 SUPERFAMILY SSF54991 683 779 4.58E-22 T 18-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 SHALO_0799 473bc5e7562d5eb782be393501edbd00 779 Gene3D G3DSA:3.30.930.10 486 678 2.9E-34 T 18-10-2018 SHALO_0799 473bc5e7562d5eb782be393501edbd00 779 SUPERFAMILY SSF46955 394 467 2.2E-14 T 18-10-2018 IPR009061 Putative DNA-binding domain superfamily SHALO_0799 473bc5e7562d5eb782be393501edbd00 779 SMART SM00896 687 779 4.5E-25 T 18-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 SHALO_0799 473bc5e7562d5eb782be393501edbd00 779 Gene3D G3DSA:2.40.50.140 40 156 2.2E-65 T 18-10-2018 SHALO_0799 473bc5e7562d5eb782be393501edbd00 779 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 779 1.8E-184 T 18-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 SHALO_0799 473bc5e7562d5eb782be393501edbd00 779 Pfam PF03484 tRNA synthetase B5 domain 398 462 2.9E-13 T 18-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 SHALO_0799 473bc5e7562d5eb782be393501edbd00 779 Pfam PF03147 Ferredoxin-fold anticodon binding domain 687 779 5.6E-20 T 18-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 SHALO_0647 abee4ae7d3f664f5eb8777962febdbc7 369 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 210 355 3.5E-49 T 18-10-2018 IPR008136 CinA, C-terminal SHALO_0647 abee4ae7d3f664f5eb8777962febdbc7 369 SUPERFAMILY SSF142433 203 357 3.27E-51 T 18-10-2018 IPR036653 CinA-like, C-terminal SHALO_0647 abee4ae7d3f664f5eb8777962febdbc7 369 Gene3D G3DSA:3.90.950.20 194 360 7.5E-55 T 18-10-2018 IPR036653 CinA-like, C-terminal SHALO_0647 abee4ae7d3f664f5eb8777962febdbc7 369 Pfam PF02464 Competence-damaged protein 209 356 2.6E-54 T 18-10-2018 IPR008136 CinA, C-terminal SHALO_0745 14b433c8bfd876a091dd582de02c0f13 415 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 3 411 50.621 T 18-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 SHALO_0745 14b433c8bfd876a091dd582de02c0f13 415 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 217 233 - T 18-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 SHALO_0745 14b433c8bfd876a091dd582de02c0f13 415 SUPERFAMILY SSF53383 2 411 5.01E-175 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase SHALO_0745 14b433c8bfd876a091dd582de02c0f13 415 Gene3D G3DSA:3.40.640.10 33 283 1.2E-178 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 SHALO_0745 14b433c8bfd876a091dd582de02c0f13 415 Pfam PF00464 Serine hydroxymethyltransferase 4 379 5.4E-174 T 18-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 SHALO_0745 14b433c8bfd876a091dd582de02c0f13 415 Gene3D G3DSA:3.90.1150.10 6 389 1.2E-178 T 18-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 SHALO_0745 14b433c8bfd876a091dd582de02c0f13 415 PIRSF PIRSF000412 1 410 1.1E-162 T 18-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 SHALO_2164 df0feaa74cb0d8563b97a26fbc4a45d7 133 Pfam PF03459 TOBE domain 68 125 5.6E-8 T 18-10-2018 IPR005116 Transport-associated OB, type 1 SHALO_2164 df0feaa74cb0d8563b97a26fbc4a45d7 133 SUPERFAMILY SSF50331 1 128 2.96E-18 T 18-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal SHALO_2164 df0feaa74cb0d8563b97a26fbc4a45d7 133 Gene3D G3DSA:2.40.50.100 64 128 4.0E-14 T 18-10-2018 SHALO_2913 9c845410710850e9b794c0d439162be4 352 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 254 1.4E-54 T 18-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 SHALO_2913 9c845410710850e9b794c0d439162be4 352 PRINTS PR01713 Nucleotide sugar epimerase signature 230 245 6.3E-27 T 18-10-2018 SHALO_2913 9c845410710850e9b794c0d439162be4 352 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 6.3E-27 T 18-10-2018 SHALO_2913 9c845410710850e9b794c0d439162be4 352 PRINTS PR01713 Nucleotide sugar epimerase signature 270 285 6.3E-27 T 18-10-2018 SHALO_2913 9c845410710850e9b794c0d439162be4 352 PRINTS PR01713 Nucleotide sugar epimerase signature 309 326 6.3E-27 T 18-10-2018 SHALO_2913 9c845410710850e9b794c0d439162be4 352 Gene3D G3DSA:3.90.25.10 194 342 5.3E-95 T 18-10-2018 SHALO_2913 9c845410710850e9b794c0d439162be4 352 Gene3D G3DSA:3.40.50.720 4 330 5.3E-95 T 18-10-2018 SHALO_2913 9c845410710850e9b794c0d439162be4 352 SUPERFAMILY SSF51735 1 347 3.61E-88 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_0521 0a2ab9575d86976d4a1b2edf0c6d8d54 189 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 16 171 4.8E-39 T 18-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 SHALO_0521 0a2ab9575d86976d4a1b2edf0c6d8d54 189 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 3 183 21.898 T 18-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 SHALO_0521 0a2ab9575d86976d4a1b2edf0c6d8d54 189 SUPERFAMILY SSF53335 10 169 2.67E-22 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_0521 0a2ab9575d86976d4a1b2edf0c6d8d54 189 Pfam PF02527 rRNA small subunit methyltransferase G 14 170 1.4E-38 T 18-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 SHALO_0521 0a2ab9575d86976d4a1b2edf0c6d8d54 189 Gene3D G3DSA:3.40.50.150 3 187 4.4E-41 T 18-10-2018 SHALO_0521 0a2ab9575d86976d4a1b2edf0c6d8d54 189 PIRSF PIRSF003078 3 186 5.9E-41 T 18-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 SHALO_1235 877e79d943ff23be21456fd20780602d 209 SUPERFAMILY SSF55729 5 183 7.26E-19 T 18-10-2018 IPR016181 Acyl-CoA N-acyltransferase SHALO_1235 877e79d943ff23be21456fd20780602d 209 Pfam PF00583 Acetyltransferase (GNAT) family 31 179 1.9E-10 T 18-10-2018 IPR000182 GNAT domain SHALO_2247 b06641459074b9a202898d81c6925f9b 472 Pfam PF01467 Cytidylyltransferase-like 347 437 1.3E-15 T 18-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SHALO_2247 b06641459074b9a202898d81c6925f9b 472 Gene3D G3DSA:3.40.50.620 319 472 4.2E-41 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_2247 b06641459074b9a202898d81c6925f9b 472 Hamap MF_01603 Bifunctional protein HldE [hldE]. 2 472 40.815 T 18-10-2018 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 SHALO_2247 b06641459074b9a202898d81c6925f9b 472 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 7 312 8.5E-115 T 18-10-2018 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 SHALO_2247 b06641459074b9a202898d81c6925f9b 472 Pfam PF00294 pfkB family carbohydrate kinase 10 304 1.0E-47 T 18-10-2018 IPR011611 Carbohydrate kinase PfkB SHALO_2247 b06641459074b9a202898d81c6925f9b 472 SUPERFAMILY SSF53613 10 315 2.34E-58 T 18-10-2018 IPR029056 Ribokinase-like SHALO_2247 b06641459074b9a202898d81c6925f9b 472 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 344 406 2.4E-14 T 18-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SHALO_2247 b06641459074b9a202898d81c6925f9b 472 SUPERFAMILY SSF52374 343 469 1.1E-25 T 18-10-2018 SHALO_2247 b06641459074b9a202898d81c6925f9b 472 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 339 470 4.4E-57 T 18-10-2018 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 SHALO_2247 b06641459074b9a202898d81c6925f9b 472 Gene3D G3DSA:3.40.1190.20 1 311 2.3E-105 T 18-10-2018 IPR029056 Ribokinase-like SHALO_1761 2696fcd25b16c0abc1144179deb0cc05 443 Pfam PF03572 Peptidase family S41 200 361 2.4E-54 T 18-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 SHALO_1761 2696fcd25b16c0abc1144179deb0cc05 443 SMART SM00245 174 362 8.0E-75 T 18-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 SHALO_1761 2696fcd25b16c0abc1144179deb0cc05 443 SUPERFAMILY SSF50156 75 198 4.66E-25 T 18-10-2018 IPR036034 PDZ superfamily GO:0005515 SHALO_1761 2696fcd25b16c0abc1144179deb0cc05 443 SMART SM00228 101 172 5.6E-17 T 18-10-2018 IPR001478 PDZ domain GO:0005515 SHALO_1761 2696fcd25b16c0abc1144179deb0cc05 443 Gene3D G3DSA:3.90.226.10 189 359 2.0E-87 T 18-10-2018 SHALO_1761 2696fcd25b16c0abc1144179deb0cc05 443 SUPERFAMILY SSF52096 34 366 1.66E-74 T 18-10-2018 IPR029045 ClpP/crotonase-like domain superfamily SHALO_1761 2696fcd25b16c0abc1144179deb0cc05 443 Gene3D G3DSA:2.30.42.10 101 188 2.0E-87 T 18-10-2018 SHALO_1761 2696fcd25b16c0abc1144179deb0cc05 443 Pfam PF13180 PDZ domain 101 180 2.6E-13 T 18-10-2018 IPR001478 PDZ domain GO:0005515 SHALO_1761 2696fcd25b16c0abc1144179deb0cc05 443 Gene3D G3DSA:3.30.750.44 53 337 2.0E-87 T 18-10-2018 SHALO_1761 2696fcd25b16c0abc1144179deb0cc05 443 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 60 377 1.2E-109 T 18-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 SHALO_0579 939948514ae8c462c09fc718c328e5a0 438 SMART SM00729 144 366 1.2E-51 T 18-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 SHALO_0579 939948514ae8c462c09fc718c328e5a0 438 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 8 434 4.6E-136 T 18-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 SHALO_0579 939948514ae8c462c09fc718c328e5a0 438 Pfam PF04055 Radical SAM superfamily 148 323 1.5E-26 T 18-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 SHALO_0579 939948514ae8c462c09fc718c328e5a0 438 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 7 438 62.171 T 18-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 SHALO_0579 939948514ae8c462c09fc718c328e5a0 438 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 8 437 1.3E-169 T 18-10-2018 SHALO_0579 939948514ae8c462c09fc718c328e5a0 438 SUPERFAMILY SSF102114 115 370 2.88E-55 T 18-10-2018 SHALO_0579 939948514ae8c462c09fc718c328e5a0 438 Pfam PF01938 TRAM domain 381 437 8.8E-8 T 18-10-2018 IPR002792 TRAM domain SHALO_0579 939948514ae8c462c09fc718c328e5a0 438 Gene3D G3DSA:3.80.30.20 143 380 2.4E-81 T 18-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe SHALO_0579 939948514ae8c462c09fc718c328e5a0 438 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 148 168 - T 18-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 SHALO_0579 939948514ae8c462c09fc718c328e5a0 438 Gene3D G3DSA:3.40.50.12160 7 139 8.2E-30 T 18-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily SHALO_0579 939948514ae8c462c09fc718c328e5a0 438 Pfam PF00919 Uncharacterized protein family UPF0004 8 106 9.2E-26 T 18-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 SHALO_2434 65afea5a90cf7afbd9a6be4bb2bc50bd 93 Gene3D G3DSA:3.30.70.330 3 90 1.4E-17 T 18-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily SHALO_2434 65afea5a90cf7afbd9a6be4bb2bc50bd 93 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 4 93 13.156 T 18-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 SHALO_2434 65afea5a90cf7afbd9a6be4bb2bc50bd 93 SUPERFAMILY SSF54189 7 89 6.83E-21 T 18-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_2434 65afea5a90cf7afbd9a6be4bb2bc50bd 93 Pfam PF00276 Ribosomal protein L23 9 88 7.1E-17 T 18-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 SHALO_1340 63236c69db8e2d1b5d45dadfcdee63f3 1043 SUPERFAMILY SSF82866 831 1026 1.83E-46 T 18-10-2018 SHALO_1340 63236c69db8e2d1b5d45dadfcdee63f3 1043 Gene3D G3DSA:3.30.70.1430 39 817 0.0 T 18-10-2018 SHALO_1340 63236c69db8e2d1b5d45dadfcdee63f3 1043 Gene3D G3DSA:1.20.1640.10 9 512 0.0 T 18-10-2018 SHALO_1340 63236c69db8e2d1b5d45dadfcdee63f3 1043 Gene3D G3DSA:3.30.2090.10 180 277 0.0 T 18-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SHALO_1340 63236c69db8e2d1b5d45dadfcdee63f3 1043 Gene3D G3DSA:3.30.2090.10 721 809 0.0 T 18-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SHALO_1340 63236c69db8e2d1b5d45dadfcdee63f3 1043 SUPERFAMILY SSF82693 565 671 2.43E-26 T 18-10-2018 SHALO_1340 63236c69db8e2d1b5d45dadfcdee63f3 1043 SUPERFAMILY SSF82714 184 274 2.09E-21 T 18-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SHALO_1340 63236c69db8e2d1b5d45dadfcdee63f3 1043 SUPERFAMILY SSF82693 138 332 9.42E-26 T 18-10-2018 SHALO_1340 63236c69db8e2d1b5d45dadfcdee63f3 1043 SUPERFAMILY SSF82866 298 501 8.11E-50 T 18-10-2018 SHALO_1340 63236c69db8e2d1b5d45dadfcdee63f3 1043 Gene3D G3DSA:3.30.70.1320 134 334 0.0 T 18-10-2018 SHALO_1340 63236c69db8e2d1b5d45dadfcdee63f3 1043 Pfam PF00873 AcrB/AcrD/AcrF family 2 1025 0.0 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SHALO_1340 63236c69db8e2d1b5d45dadfcdee63f3 1043 Gene3D G3DSA:3.30.70.1430 567 668 0.0 T 18-10-2018 SHALO_1340 63236c69db8e2d1b5d45dadfcdee63f3 1043 SUPERFAMILY SSF82693 673 857 2.44E-26 T 18-10-2018 SHALO_1340 63236c69db8e2d1b5d45dadfcdee63f3 1043 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 7.9E-98 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SHALO_1340 63236c69db8e2d1b5d45dadfcdee63f3 1043 PRINTS PR00702 Acriflavin resistance protein family signature 365 386 7.9E-98 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SHALO_1340 63236c69db8e2d1b5d45dadfcdee63f3 1043 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 7.9E-98 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SHALO_1340 63236c69db8e2d1b5d45dadfcdee63f3 1043 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 7.9E-98 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SHALO_1340 63236c69db8e2d1b5d45dadfcdee63f3 1043 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 7.9E-98 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SHALO_1340 63236c69db8e2d1b5d45dadfcdee63f3 1043 PRINTS PR00702 Acriflavin resistance protein family signature 473 496 7.9E-98 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SHALO_1340 63236c69db8e2d1b5d45dadfcdee63f3 1043 PRINTS PR00702 Acriflavin resistance protein family signature 621 635 7.9E-98 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SHALO_1340 63236c69db8e2d1b5d45dadfcdee63f3 1043 PRINTS PR00702 Acriflavin resistance protein family signature 448 471 7.9E-98 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SHALO_1340 63236c69db8e2d1b5d45dadfcdee63f3 1043 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 7.9E-98 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SHALO_1340 63236c69db8e2d1b5d45dadfcdee63f3 1043 SUPERFAMILY SSF82693 39 133 4.19E-26 T 18-10-2018 SHALO_1340 63236c69db8e2d1b5d45dadfcdee63f3 1043 SUPERFAMILY SSF82714 722 807 1.57E-21 T 18-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SHALO_1340 63236c69db8e2d1b5d45dadfcdee63f3 1043 Gene3D G3DSA:3.30.70.1440 669 866 0.0 T 18-10-2018 SHALO_1340 63236c69db8e2d1b5d45dadfcdee63f3 1043 Gene3D G3DSA:1.20.1640.10 513 1023 0.0 T 18-10-2018 SHALO_1340 63236c69db8e2d1b5d45dadfcdee63f3 1043 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 2 1036 0.0 T 18-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 SHALO_0604 300f682a32a05e62bbe20a782487c987 386 SUPERFAMILY SSF81648 218 357 7.19E-28 T 18-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 SHALO_0604 300f682a32a05e62bbe20a782487c987 386 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 259 365 2.6E-20 T 18-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 SHALO_0604 300f682a32a05e62bbe20a782487c987 386 SUPERFAMILY SSF81342 6 261 2.04E-63 T 18-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 SHALO_0604 300f682a32a05e62bbe20a782487c987 386 Pfam PF00033 Cytochrome b/b6/petB 8 185 2.7E-48 T 18-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 SHALO_0604 300f682a32a05e62bbe20a782487c987 386 Gene3D G3DSA:1.20.810.10 1 386 3.6E-101 T 18-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 SHALO_1752 68de77289ac0ef15cc091ac0c8d16b5b 524 Pfam PF00501 AMP-binding enzyme 11 426 7.2E-74 T 18-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 SHALO_1752 68de77289ac0ef15cc091ac0c8d16b5b 524 SUPERFAMILY SSF56801 3 522 1.44E-107 T 18-10-2018 SHALO_1752 68de77289ac0ef15cc091ac0c8d16b5b 524 Gene3D G3DSA:3.30.300.30 422 523 1.3E-18 T 18-10-2018 SHALO_1752 68de77289ac0ef15cc091ac0c8d16b5b 524 Gene3D G3DSA:3.40.50.12780 3 421 3.9E-78 T 18-10-2018 SHALO_1087 9f3532452bf35d50833aab8cfd14bca3 731 SUPERFAMILY SSF51726 4 364 1.57E-90 T 18-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 SHALO_1087 9f3532452bf35d50833aab8cfd14bca3 731 SUPERFAMILY SSF51726 381 729 4.19E-107 T 18-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 SHALO_1087 9f3532452bf35d50833aab8cfd14bca3 731 PIRSF PIRSF000382 1 731 0.0 T 18-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 SHALO_1087 9f3532452bf35d50833aab8cfd14bca3 731 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 406 726 3.2E-141 T 18-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 SHALO_1087 9f3532452bf35d50833aab8cfd14bca3 731 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 8 731 1.5E-293 T 18-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 SHALO_1087 9f3532452bf35d50833aab8cfd14bca3 731 Gene3D G3DSA:3.20.20.210 374 731 2.0E-298 T 18-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 SHALO_1087 9f3532452bf35d50833aab8cfd14bca3 731 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 4 309 2.2E-106 T 18-10-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 SHALO_1087 9f3532452bf35d50833aab8cfd14bca3 731 Gene3D G3DSA:3.20.20.210 6 499 2.0E-298 T 18-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 SHALO_1940 69af0cd655da308460671dde02a36c6c 375 PRINTS PR00143 Citrate synthase signature 328 342 3.0E-39 T 18-10-2018 IPR002020 Citrate synthase GO:0046912 SHALO_1940 69af0cd655da308460671dde02a36c6c 375 PRINTS PR00143 Citrate synthase signature 198 226 3.0E-39 T 18-10-2018 IPR002020 Citrate synthase GO:0046912 SHALO_1940 69af0cd655da308460671dde02a36c6c 375 PRINTS PR00143 Citrate synthase signature 126 139 3.0E-39 T 18-10-2018 IPR002020 Citrate synthase GO:0046912 SHALO_1940 69af0cd655da308460671dde02a36c6c 375 PRINTS PR00143 Citrate synthase signature 308 324 3.0E-39 T 18-10-2018 IPR002020 Citrate synthase GO:0046912 SHALO_1940 69af0cd655da308460671dde02a36c6c 375 PRINTS PR00143 Citrate synthase signature 176 191 3.0E-39 T 18-10-2018 IPR002020 Citrate synthase GO:0046912 SHALO_1940 69af0cd655da308460671dde02a36c6c 375 PRINTS PR00143 Citrate synthase signature 251 271 3.0E-39 T 18-10-2018 IPR002020 Citrate synthase GO:0046912 SHALO_1940 69af0cd655da308460671dde02a36c6c 375 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 11 375 2.9E-146 T 18-10-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 SHALO_1940 69af0cd655da308460671dde02a36c6c 375 Pfam PF00285 Citrate synthase, C-terminal domain 11 357 4.2E-110 T 18-10-2018 IPR002020 Citrate synthase GO:0046912 SHALO_1940 69af0cd655da308460671dde02a36c6c 375 Gene3D G3DSA:1.10.230.10 224 322 6.2E-117 T 18-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain SHALO_1940 69af0cd655da308460671dde02a36c6c 375 Gene3D G3DSA:1.10.580.10 31 355 6.2E-117 T 18-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 SHALO_1940 69af0cd655da308460671dde02a36c6c 375 PIRSF PIRSF001369 2 375 1.3E-117 T 18-10-2018 IPR024176 Citrate synthase, bacterial-type SHALO_1940 69af0cd655da308460671dde02a36c6c 375 SUPERFAMILY SSF48256 8 375 3.01E-121 T 18-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 SHALO_1921 6581ba4e647b648928db09b6a22bfd1d 286 SUPERFAMILY SSF53850 18 247 4.76E-31 T 18-10-2018 SHALO_1921 6581ba4e647b648928db09b6a22bfd1d 286 Gene3D G3DSA:3.40.190.10 111 216 3.1E-42 T 18-10-2018 SHALO_1921 6581ba4e647b648928db09b6a22bfd1d 286 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 18 230 8.8E-35 T 18-10-2018 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 SHALO_1921 6581ba4e647b648928db09b6a22bfd1d 286 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 23 270 7.9E-50 T 18-10-2018 SHALO_1921 6581ba4e647b648928db09b6a22bfd1d 286 Gene3D G3DSA:3.40.190.10 23 241 3.1E-42 T 18-10-2018 SHALO_2029 30b79a6729dc8a418e8e70ac102d5fa7 118 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 4 116 3.2E-46 T 18-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_2029 30b79a6729dc8a418e8e70ac102d5fa7 118 Gene3D G3DSA:2.30.30.790 10 118 4.9E-15 T 18-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_2029 30b79a6729dc8a418e8e70ac102d5fa7 118 PIRSF PIRSF002191 1 118 3.3E-43 T 18-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_2029 30b79a6729dc8a418e8e70ac102d5fa7 118 SUPERFAMILY SSF50104 2 117 7.82E-40 T 18-10-2018 IPR008991 Translation protein SH3-like domain superfamily SHALO_2029 30b79a6729dc8a418e8e70ac102d5fa7 118 ProSitePatterns PS01015 Ribosomal protein L19 signature. 89 104 - T 18-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_2029 30b79a6729dc8a418e8e70ac102d5fa7 118 PRINTS PR00061 Ribosomal protein L19 signature 36 65 2.1E-35 T 18-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_2029 30b79a6729dc8a418e8e70ac102d5fa7 118 PRINTS PR00061 Ribosomal protein L19 signature 6 35 2.1E-35 T 18-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_2029 30b79a6729dc8a418e8e70ac102d5fa7 118 PRINTS PR00061 Ribosomal protein L19 signature 91 116 2.1E-35 T 18-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_2029 30b79a6729dc8a418e8e70ac102d5fa7 118 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 3 117 30.469 T 18-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_2029 30b79a6729dc8a418e8e70ac102d5fa7 118 Pfam PF01245 Ribosomal protein L19 5 115 3.0E-43 T 18-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_0957 e52711ea17de88b30054b279d26fa743 366 PIRSF PIRSF006641 1 366 3.1E-152 T 18-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 SHALO_0957 e52711ea17de88b30054b279d26fa743 366 SUPERFAMILY SSF81271 282 363 8.28E-36 T 18-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 SHALO_0957 e52711ea17de88b30054b279d26fa743 366 Gene3D G3DSA:3.40.50.300 5 281 1.4E-141 T 18-10-2018 SHALO_0957 e52711ea17de88b30054b279d26fa743 366 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 366 1.2E-144 T 18-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 SHALO_0957 e52711ea17de88b30054b279d26fa743 366 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 366 41.666 T 18-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 SHALO_0957 e52711ea17de88b30054b279d26fa743 366 Gene3D G3DSA:1.10.150.300 114 202 1.4E-141 T 18-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 SHALO_0957 e52711ea17de88b30054b279d26fa743 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 27 45 1.1E-34 T 18-10-2018 IPR006073 GTP binding domain GO:0005525 SHALO_0957 e52711ea17de88b30054b279d26fa743 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 71 86 1.1E-34 T 18-10-2018 IPR006073 GTP binding domain GO:0005525 SHALO_0957 e52711ea17de88b30054b279d26fa743 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 88 106 1.1E-34 T 18-10-2018 IPR006073 GTP binding domain GO:0005525 SHALO_0957 e52711ea17de88b30054b279d26fa743 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 1.1E-34 T 18-10-2018 IPR006073 GTP binding domain GO:0005525 SHALO_0957 e52711ea17de88b30054b279d26fa743 366 Pfam PF01926 50S ribosome-binding GTPase 5 123 9.0E-23 T 18-10-2018 IPR006073 GTP binding domain GO:0005525 SHALO_0957 e52711ea17de88b30054b279d26fa743 366 SUPERFAMILY SSF52540 4 304 1.33E-73 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0957 e52711ea17de88b30054b279d26fa743 366 Gene3D G3DSA:3.10.20.30 49 364 1.4E-141 T 18-10-2018 IPR012675 Beta-grasp domain superfamily SHALO_0957 e52711ea17de88b30054b279d26fa743 366 Pfam PF06071 Protein of unknown function (DUF933) 282 365 3.2E-39 T 18-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 SHALO_0045 12bc398922d3b3ba00e68d789b256450 180 Gene3D G3DSA:3.30.1490.150 103 175 8.1E-50 T 18-10-2018 SHALO_0045 12bc398922d3b3ba00e68d789b256450 180 TIGRFAM TIGR04335 AmmeMemoSam_A: AmmeMemoRadiSam system protein A 4 178 2.8E-58 T 18-10-2018 IPR027623 AmmeMemoRadiSam system protein A SHALO_0045 12bc398922d3b3ba00e68d789b256450 180 TIGRFAM TIGR00296 TIGR00296: uncharacterized protein, PH0010 family 7 174 2.2E-31 T 18-10-2018 IPR023473 AMMECR1 SHALO_0045 12bc398922d3b3ba00e68d789b256450 180 SUPERFAMILY SSF143447 3 180 5.76E-52 T 18-10-2018 IPR036071 AMMECR1 domain superfamily SHALO_0045 12bc398922d3b3ba00e68d789b256450 180 Pfam PF01871 AMMECR1 7 178 1.4E-43 T 18-10-2018 IPR002733 AMMECR1 domain SHALO_0045 12bc398922d3b3ba00e68d789b256450 180 Gene3D G3DSA:3.30.700.20 3 177 8.1E-50 T 18-10-2018 IPR027485 AMMECR1, N-terminal SHALO_0405 72bbd27ea3526adabcb6c29dd41b732a 691 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 129 583 5.0E-86 T 18-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit SHALO_0405 72bbd27ea3526adabcb6c29dd41b732a 691 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 32 659 1.2E-193 T 18-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ SHALO_1228 6931bf3f10c51ac16be5fd89428a7870 256 Pfam PF00905 Penicillin binding protein transpeptidase domain 48 234 4.0E-33 T 18-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 SHALO_1228 6931bf3f10c51ac16be5fd89428a7870 256 SUPERFAMILY SSF56601 20 230 3.59E-32 T 18-10-2018 IPR012338 Beta-lactamase/transpeptidase-like SHALO_1228 6931bf3f10c51ac16be5fd89428a7870 256 ProSitePatterns PS00337 Beta-lactamase class-D active site. 59 69 - T 18-10-2018 IPR002137 Beta-lactamase, class-D active site GO:0008800|GO:0017001 KEGG: 00311+3.5.2.6 SHALO_1228 6931bf3f10c51ac16be5fd89428a7870 256 Gene3D G3DSA:3.40.710.10 5 256 7.3E-87 T 18-10-2018 SHALO_1530 eb516be2ac2065f922f37427839b2334 420 Gene3D G3DSA:3.40.50.880 245 420 6.9E-11 T 18-10-2018 IPR029062 Class I glutamine amidotransferase-like SHALO_1530 eb516be2ac2065f922f37427839b2334 420 TIGRFAM TIGR00379 cobB: cobyrinic acid a,c-diamide synthase 6 416 2.1E-78 T 18-10-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 SHALO_1530 eb516be2ac2065f922f37427839b2334 420 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 238 410 1.1E-24 T 18-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 SHALO_1530 eb516be2ac2065f922f37427839b2334 420 SUPERFAMILY SSF52317 237 418 3.93E-22 T 18-10-2018 IPR029062 Class I glutamine amidotransferase-like SHALO_1530 eb516be2ac2065f922f37427839b2334 420 SUPERFAMILY SSF52540 1 177 1.65E-29 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_1530 eb516be2ac2065f922f37427839b2334 420 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 175 3.3E-9 T 18-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain SHALO_1530 eb516be2ac2065f922f37427839b2334 420 Gene3D G3DSA:3.40.50.300 2 183 1.6E-18 T 18-10-2018 SHALO_0400 34962de61518547211cae8bc8291f090 387 Gene3D G3DSA:3.40.50.300 125 307 8.9E-65 T 18-10-2018 SHALO_0400 34962de61518547211cae8bc8291f090 387 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 160 173 - T 18-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 SHALO_0400 34962de61518547211cae8bc8291f090 387 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 222 237 - T 18-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 SHALO_0400 34962de61518547211cae8bc8291f090 387 Pfam PF00158 Sigma-54 interaction domain 137 303 4.8E-70 T 18-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SHALO_0400 34962de61518547211cae8bc8291f090 387 SUPERFAMILY SSF52172 1 181 6.83E-32 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_0400 34962de61518547211cae8bc8291f090 387 Gene3D G3DSA:1.10.8.60 309 386 5.4E-22 T 18-10-2018 SHALO_0400 34962de61518547211cae8bc8291f090 387 SMART SM00382 156 318 3.7E-7 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_0400 34962de61518547211cae8bc8291f090 387 SMART SM00448 1 109 3.7E-30 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_0400 34962de61518547211cae8bc8291f090 387 Gene3D G3DSA:3.40.50.2300 1 124 1.6E-27 T 18-10-2018 SHALO_0400 34962de61518547211cae8bc8291f090 387 SUPERFAMILY SSF52540 136 377 5.21E-69 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0400 34962de61518547211cae8bc8291f090 387 Pfam PF00072 Response regulator receiver domain 3 110 1.1E-22 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_2373 31a03878cda98c652f3a0dca566c8c69 522 Gene3D G3DSA:3.90.700.10 301 463 1.2E-114 T 18-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_2373 31a03878cda98c652f3a0dca566c8c69 522 TIGRFAM TIGR01813 flavo_cyto_c: flavocytochrome c 47 520 7.2E-131 T 18-10-2018 IPR010960 Flavocytochrome c GO:0000104|GO:0055114 SHALO_2373 31a03878cda98c652f3a0dca566c8c69 522 SUPERFAMILY SSF56425 300 467 8.37E-25 T 18-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_2373 31a03878cda98c652f3a0dca566c8c69 522 Gene3D G3DSA:3.50.50.60 46 521 1.2E-114 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SHALO_2373 31a03878cda98c652f3a0dca566c8c69 522 Pfam PF00890 FAD binding domain 47 507 1.4E-69 T 18-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_2373 31a03878cda98c652f3a0dca566c8c69 522 SUPERFAMILY SSF51905 36 522 3.63E-49 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SHALO_1462 8b01bd398a7603488697ca153922f8df 510 Pfam PF00263 Bacterial type II and III secretion system protein 317 489 1.1E-44 T 18-10-2018 IPR004846 Type II/III secretion system GO:0009306 SHALO_1462 8b01bd398a7603488697ca153922f8df 510 TIGRFAM TIGR02519 pilus_MshL: pilus (MSHA type) biogenesis protein MshL 197 489 2.1E-79 T 18-10-2018 IPR013358 Pilus biogenesis, MshL SHALO_1462 8b01bd398a7603488697ca153922f8df 510 PRINTS PR00811 Bacterial general secretion pathway protein D signature 351 361 7.9E-13 T 18-10-2018 IPR001775 GspD/PilQ family SHALO_1462 8b01bd398a7603488697ca153922f8df 510 PRINTS PR00811 Bacterial general secretion pathway protein D signature 312 336 7.9E-13 T 18-10-2018 IPR001775 GspD/PilQ family SHALO_1462 8b01bd398a7603488697ca153922f8df 510 PRINTS PR00811 Bacterial general secretion pathway protein D signature 454 472 7.9E-13 T 18-10-2018 IPR001775 GspD/PilQ family SHALO_1462 8b01bd398a7603488697ca153922f8df 510 PRINTS PR00811 Bacterial general secretion pathway protein D signature 231 241 7.9E-13 T 18-10-2018 IPR001775 GspD/PilQ family SHALO_0998 b2cbca0b4481b4ae269c1a35383c796f 198 Pfam PF02589 LUD domain 2 192 3.3E-36 T 18-10-2018 IPR003741 LUD domain SHALO_2554 d6c2bcfa5ea64b2c40f7ffa8513a8aed 168 SUPERFAMILY SSF52218 1 164 9.25E-45 T 18-10-2018 IPR029039 Flavoprotein-like superfamily SHALO_2554 d6c2bcfa5ea64b2c40f7ffa8513a8aed 168 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 18-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 SHALO_2554 d6c2bcfa5ea64b2c40f7ffa8513a8aed 168 PIRSF PIRSF038996 1 168 8.5E-64 T 18-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 SHALO_2554 d6c2bcfa5ea64b2c40f7ffa8513a8aed 168 Gene3D G3DSA:3.40.50.360 3 168 3.6E-47 T 18-10-2018 IPR029039 Flavoprotein-like superfamily SHALO_2554 d6c2bcfa5ea64b2c40f7ffa8513a8aed 168 Pfam PF00258 Flavodoxin 5 156 5.5E-25 T 18-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 SHALO_2554 d6c2bcfa5ea64b2c40f7ffa8513a8aed 168 TIGRFAM TIGR01752 flav_long: flavodoxin 2 164 4.9E-62 T 18-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 SHALO_1552 ba6e1b6367a7059188ac25d6bddd437b 155 Gene3D G3DSA:1.10.260.40 20 90 5.4E-9 T 18-10-2018 SHALO_0570 086fab66147c584bb31372f736bc0138 293 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 53 4.7E-8 T 18-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SHALO_0570 086fab66147c584bb31372f736bc0138 293 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 184 277 4.9E-25 T 18-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS SHALO_0570 086fab66147c584bb31372f736bc0138 293 SUPERFAMILY SSF81301 182 277 2.13E-23 T 18-10-2018 SHALO_0570 086fab66147c584bb31372f736bc0138 293 Gene3D G3DSA:3.30.460.10 181 291 3.9E-22 T 18-10-2018 SHALO_0570 086fab66147c584bb31372f736bc0138 293 Pfam PF02410 Ribosomal silencing factor during starvation 186 276 1.9E-19 T 18-10-2018 SHALO_0570 086fab66147c584bb31372f736bc0138 293 Pfam PF01467 Cytidylyltransferase-like 5 156 6.2E-19 T 18-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SHALO_0570 086fab66147c584bb31372f736bc0138 293 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 1 178 21.386 T 18-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 SHALO_0570 086fab66147c584bb31372f736bc0138 293 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 5 172 1.1E-37 T 18-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 SHALO_0570 086fab66147c584bb31372f736bc0138 293 SUPERFAMILY SSF52374 3 160 4.02E-35 T 18-10-2018 SHALO_0570 086fab66147c584bb31372f736bc0138 293 Gene3D G3DSA:3.40.50.620 2 180 1.7E-37 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_0570 086fab66147c584bb31372f736bc0138 293 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 176 280 17.369 T 18-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS SHALO_1664 cdb9ad8344a60b3195c5cf660a8126a8 761 Gene3D G3DSA:3.20.20.450 507 760 3.0E-83 T 18-10-2018 IPR035919 EAL domain superfamily SHALO_1664 cdb9ad8344a60b3195c5cf660a8126a8 761 Pfam PF00563 EAL domain 512 745 1.4E-67 T 18-10-2018 IPR001633 EAL domain SHALO_1664 cdb9ad8344a60b3195c5cf660a8126a8 761 SMART SM00052 505 750 8.6E-99 T 18-10-2018 IPR001633 EAL domain SHALO_1664 cdb9ad8344a60b3195c5cf660a8126a8 761 SMART SM00267 329 495 3.0E-48 T 18-10-2018 IPR000160 GGDEF domain SHALO_1664 cdb9ad8344a60b3195c5cf660a8126a8 761 SUPERFAMILY SSF141868 512 756 4.97E-78 T 18-10-2018 IPR035919 EAL domain superfamily SHALO_1664 cdb9ad8344a60b3195c5cf660a8126a8 761 Gene3D G3DSA:3.30.450.20 27 180 4.9E-8 T 18-10-2018 SHALO_1664 cdb9ad8344a60b3195c5cf660a8126a8 761 Gene3D G3DSA:3.30.70.270 334 506 4.8E-50 T 18-10-2018 SHALO_1664 cdb9ad8344a60b3195c5cf660a8126a8 761 SUPERFAMILY SSF55073 344 496 4.39E-42 T 18-10-2018 IPR029787 Nucleotide cyclase SHALO_1664 cdb9ad8344a60b3195c5cf660a8126a8 761 Pfam PF00990 Diguanylate cyclase, GGDEF domain 339 491 5.9E-42 T 18-10-2018 IPR000160 GGDEF domain SHALO_1664 cdb9ad8344a60b3195c5cf660a8126a8 761 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 337 493 3.2E-38 T 18-10-2018 IPR000160 GGDEF domain SHALO_0502 55af6c985848ae66415b8d50895aa107 427 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 228 241 - T 18-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0502 55af6c985848ae66415b8d50895aa107 427 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 5 425 22.844 T 18-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0502 55af6c985848ae66415b8d50895aa107 427 Pfam PF00146 NADH dehydrogenase 14 418 1.7E-102 T 18-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0502 55af6c985848ae66415b8d50895aa107 427 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 56 71 - T 18-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0856 343dd2df09c699019c2a839bbc8d3365 190 Gene3D G3DSA:3.40.50.300 2 189 3.6E-44 T 18-10-2018 SHALO_0856 343dd2df09c699019c2a839bbc8d3365 190 PRINTS PR00094 Adenylate kinase signature 6 19 6.2E-21 T 18-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 SHALO_0856 343dd2df09c699019c2a839bbc8d3365 190 PRINTS PR00094 Adenylate kinase signature 134 149 6.2E-21 T 18-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 SHALO_0856 343dd2df09c699019c2a839bbc8d3365 190 PRINTS PR00094 Adenylate kinase signature 84 100 6.2E-21 T 18-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 SHALO_0856 343dd2df09c699019c2a839bbc8d3365 190 PRINTS PR00094 Adenylate kinase signature 36 50 6.2E-21 T 18-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 SHALO_0856 343dd2df09c699019c2a839bbc8d3365 190 Pfam PF00406 Adenylate kinase 7 163 2.1E-33 T 18-10-2018 SHALO_0856 343dd2df09c699019c2a839bbc8d3365 190 ProSitePatterns PS00113 Adenylate kinase signature. 84 95 - T 18-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 SHALO_0856 343dd2df09c699019c2a839bbc8d3365 190 SUPERFAMILY SSF52540 3 188 1.08E-29 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0856 343dd2df09c699019c2a839bbc8d3365 190 Hamap MF_00235 Adenylate kinase [adk]. 3 187 32.511 T 18-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 SHALO_1653 5e115bd185790a3593f1e4e4653e2a5a 332 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 8 328 1.3E-128 T 18-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 SHALO_1653 5e115bd185790a3593f1e4e4653e2a5a 332 Gene3D G3DSA:3.20.20.30 2 331 9.6E-97 T 18-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 SHALO_1653 5e115bd185790a3593f1e4e4653e2a5a 332 Pfam PF00296 Luciferase-like monooxygenase 25 305 2.0E-35 T 18-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 SHALO_1653 5e115bd185790a3593f1e4e4653e2a5a 332 SUPERFAMILY SSF51679 6 327 6.15E-79 T 18-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 SHALO_1226 1c8293cf0f47179732a8f7e0fe992d1a 410 Pfam PF05167 Uncharacterised ACR (DUF711) 10 396 5.4E-103 T 18-10-2018 IPR007841 Uncharacterised protein family UPF0210 SHALO_1226 1c8293cf0f47179732a8f7e0fe992d1a 410 Gene3D G3DSA:3.20.70.20 3 410 3.6E-84 T 18-10-2018 SHALO_1226 1c8293cf0f47179732a8f7e0fe992d1a 410 SUPERFAMILY SSF51998 6 408 1.19E-91 T 18-10-2018 SHALO_0003 f91788dd2247966bed123aea5fa7efb7 770 Pfam PF00204 DNA gyrase B 218 385 3.5E-56 T 18-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 SHALO_0003 f91788dd2247966bed123aea5fa7efb7 770 PRINTS PR01159 DNA gyrase subunit B signature 465 474 4.6E-61 T 18-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHALO_0003 f91788dd2247966bed123aea5fa7efb7 770 PRINTS PR01159 DNA gyrase subunit B signature 4 14 4.6E-61 T 18-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHALO_0003 f91788dd2247966bed123aea5fa7efb7 770 PRINTS PR01159 DNA gyrase subunit B signature 193 206 4.6E-61 T 18-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHALO_0003 f91788dd2247966bed123aea5fa7efb7 770 PRINTS PR01159 DNA gyrase subunit B signature 355 369 4.6E-61 T 18-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHALO_0003 f91788dd2247966bed123aea5fa7efb7 770 PRINTS PR01159 DNA gyrase subunit B signature 178 193 4.6E-61 T 18-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHALO_0003 f91788dd2247966bed123aea5fa7efb7 770 PRINTS PR01159 DNA gyrase subunit B signature 307 323 4.6E-61 T 18-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHALO_0003 f91788dd2247966bed123aea5fa7efb7 770 PRINTS PR01159 DNA gyrase subunit B signature 237 255 4.6E-61 T 18-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHALO_0003 f91788dd2247966bed123aea5fa7efb7 770 PRINTS PR01159 DNA gyrase subunit B signature 723 735 4.6E-61 T 18-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHALO_0003 f91788dd2247966bed123aea5fa7efb7 770 PRINTS PR01159 DNA gyrase subunit B signature 369 389 4.6E-61 T 18-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHALO_0003 f91788dd2247966bed123aea5fa7efb7 770 PRINTS PR01159 DNA gyrase subunit B signature 739 755 4.6E-61 T 18-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHALO_0003 f91788dd2247966bed123aea5fa7efb7 770 SMART SM00433 33 763 5.6E-279 T 18-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 SHALO_0003 f91788dd2247966bed123aea5fa7efb7 770 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 31 171 2.0E-16 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_0003 f91788dd2247966bed123aea5fa7efb7 770 SMART SM00387 29 173 3.1E-21 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_0003 f91788dd2247966bed123aea5fa7efb7 770 Pfam PF01751 Toprim domain 414 524 9.1E-19 T 18-10-2018 IPR006171 TOPRIM domain SHALO_0003 f91788dd2247966bed123aea5fa7efb7 770 SUPERFAMILY SSF56719 389 765 1.05E-86 T 18-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 SHALO_0003 f91788dd2247966bed123aea5fa7efb7 770 SUPERFAMILY SSF55874 4 215 1.51E-68 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_0003 f91788dd2247966bed123aea5fa7efb7 770 ProSitePatterns PS00177 DNA topoisomerase II signature. 417 425 - T 18-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 SHALO_0003 f91788dd2247966bed123aea5fa7efb7 770 Gene3D G3DSA:3.40.50.670 394 568 3.3E-74 T 18-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 SHALO_0003 f91788dd2247966bed123aea5fa7efb7 770 Gene3D G3DSA:3.40.50.670 653 769 1.3E-26 T 18-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 SHALO_0003 f91788dd2247966bed123aea5fa7efb7 770 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 698 759 4.1E-29 T 18-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHALO_0003 f91788dd2247966bed123aea5fa7efb7 770 PRINTS PR00418 DNA topoisomerase II family signature 263 276 2.3E-69 T 18-10-2018 SHALO_0003 f91788dd2247966bed123aea5fa7efb7 770 PRINTS PR00418 DNA topoisomerase II family signature 111 125 2.3E-69 T 18-10-2018 SHALO_0003 f91788dd2247966bed123aea5fa7efb7 770 PRINTS PR00418 DNA topoisomerase II family signature 68 81 2.3E-69 T 18-10-2018 SHALO_0003 f91788dd2247966bed123aea5fa7efb7 770 PRINTS PR00418 DNA topoisomerase II family signature 33 48 2.3E-69 T 18-10-2018 SHALO_0003 f91788dd2247966bed123aea5fa7efb7 770 PRINTS PR00418 DNA topoisomerase II family signature 499 516 2.3E-69 T 18-10-2018 SHALO_0003 f91788dd2247966bed123aea5fa7efb7 770 PRINTS PR00418 DNA topoisomerase II family signature 519 531 2.3E-69 T 18-10-2018 SHALO_0003 f91788dd2247966bed123aea5fa7efb7 770 PRINTS PR00418 DNA topoisomerase II family signature 702 718 2.3E-69 T 18-10-2018 SHALO_0003 f91788dd2247966bed123aea5fa7efb7 770 PRINTS PR00418 DNA topoisomerase II family signature 415 429 2.3E-69 T 18-10-2018 SHALO_0003 f91788dd2247966bed123aea5fa7efb7 770 PRINTS PR00418 DNA topoisomerase II family signature 481 497 2.3E-69 T 18-10-2018 SHALO_0003 f91788dd2247966bed123aea5fa7efb7 770 SUPERFAMILY SSF54211 218 386 2.85E-52 T 18-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold SHALO_0003 f91788dd2247966bed123aea5fa7efb7 770 Gene3D G3DSA:3.30.230.10 217 393 5.8E-66 T 18-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SHALO_0003 f91788dd2247966bed123aea5fa7efb7 770 Gene3D G3DSA:3.30.565.10 1 216 4.4E-88 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_0003 f91788dd2247966bed123aea5fa7efb7 770 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 1 770 94.776 T 18-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SHALO_0003 f91788dd2247966bed123aea5fa7efb7 770 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 4 770 1.4E-291 T 18-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SHALO_0716 27de2ebaf4eb6a073e519cdc081b89fb 622 Gene3D G3DSA:3.20.20.540 208 520 9.4E-155 T 18-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 SHALO_0716 27de2ebaf4eb6a073e519cdc081b89fb 622 Pfam PF01964 Radical SAM ThiC family 136 584 3.9E-198 T 18-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 SHALO_0716 27de2ebaf4eb6a073e519cdc081b89fb 622 Pfam PF13667 ThiC-associated domain 19 96 6.2E-34 T 18-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 SHALO_0716 27de2ebaf4eb6a073e519cdc081b89fb 622 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 135 588 8.8E-216 T 18-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 SHALO_0716 27de2ebaf4eb6a073e519cdc081b89fb 622 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 135 589 97.938 T 18-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 SHALO_2702 0d8bfe28998b2772c6c05881482d6537 319 SUPERFAMILY SSF109604 140 297 1.77E-21 T 18-10-2018 SHALO_2702 0d8bfe28998b2772c6c05881482d6537 319 Pfam PF13328 HD domain 149 289 3.2E-8 T 18-10-2018 IPR003607 HD/PDEase domain SHALO_2702 0d8bfe28998b2772c6c05881482d6537 319 Gene3D G3DSA:1.10.3210.10 139 318 3.7E-31 T 18-10-2018 SHALO_2272 c6974c409b69681917d7b405ce036aed 289 SUPERFAMILY SSF46626 30 157 1.31E-18 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_2272 c6974c409b69681917d7b405ce036aed 289 Pfam PF00034 Cytochrome c 52 156 3.2E-11 T 18-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_2272 c6974c409b69681917d7b405ce036aed 289 SUPERFAMILY SSF46626 165 272 8.61E-21 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_2272 c6974c409b69681917d7b405ce036aed 289 PIRSF PIRSF019225 159 289 2.0E-59 T 18-10-2018 IPR021195 Ubiquinol cytochrome c reductase, cytochrome c1 subunit, predicted SHALO_2272 c6974c409b69681917d7b405ce036aed 289 PIRSF PIRSF019225 1 46 2.2E-18 T 18-10-2018 IPR021195 Ubiquinol cytochrome c reductase, cytochrome c1 subunit, predicted SHALO_2272 c6974c409b69681917d7b405ce036aed 289 PIRSF PIRSF019225 43 162 9.8E-40 T 18-10-2018 IPR021195 Ubiquinol cytochrome c reductase, cytochrome c1 subunit, predicted SHALO_2272 c6974c409b69681917d7b405ce036aed 289 Gene3D G3DSA:1.10.760.10 163 262 2.5E-10 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_2272 c6974c409b69681917d7b405ce036aed 289 Gene3D G3DSA:1.10.760.10 1 160 2.1E-14 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_1047 36cba500de52bf1dace429f0694c055d 296 SMART SM00460 181 251 2.5E-11 T 18-10-2018 IPR002931 Transglutaminase-like SHALO_1047 36cba500de52bf1dace429f0694c055d 296 Gene3D G3DSA:3.10.620.30 91 286 2.7E-42 T 18-10-2018 SHALO_1047 36cba500de52bf1dace429f0694c055d 296 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 3 82 3.3E-18 T 18-10-2018 IPR013589 Bacterial transglutaminase-like, N-terminal SHALO_1047 36cba500de52bf1dace429f0694c055d 296 SUPERFAMILY SSF54001 7 277 3.78E-37 T 18-10-2018 IPR038765 Papain-like cysteine peptidase superfamily SHALO_1047 36cba500de52bf1dace429f0694c055d 296 Pfam PF01841 Transglutaminase-like superfamily 141 249 1.8E-16 T 18-10-2018 IPR002931 Transglutaminase-like SHALO_1984 bf4f0ae50854e7de873e3c02cf65b378 703 Hamap MF_00347 Polyphosphate kinase [ppk]. 7 678 27.435 T 18-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 SHALO_1984 bf4f0ae50854e7de873e3c02cf65b378 703 Gene3D G3DSA:3.30.1840.10 4 308 1.3E-91 T 18-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 SHALO_1984 bf4f0ae50854e7de873e3c02cf65b378 703 SUPERFAMILY SSF56024 313 494 5.1E-53 T 18-10-2018 SHALO_1984 bf4f0ae50854e7de873e3c02cf65b378 703 PIRSF PIRSF015589 1 693 9.9E-269 T 18-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 SHALO_1984 bf4f0ae50854e7de873e3c02cf65b378 703 SUPERFAMILY SSF56024 501 681 1.53E-65 T 18-10-2018 SHALO_1984 bf4f0ae50854e7de873e3c02cf65b378 703 Gene3D G3DSA:3.30.870.10 315 499 2.4E-71 T 18-10-2018 SHALO_1984 bf4f0ae50854e7de873e3c02cf65b378 703 SUPERFAMILY SSF140356 7 111 2.22E-33 T 18-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 SHALO_1984 bf4f0ae50854e7de873e3c02cf65b378 703 Pfam PF13090 Polyphosphate kinase C-terminal domain 329 671 8.4E-147 T 18-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 SHALO_1984 bf4f0ae50854e7de873e3c02cf65b378 703 Pfam PF13089 Polyphosphate kinase N-terminal domain 10 114 2.4E-32 T 18-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 SHALO_1984 bf4f0ae50854e7de873e3c02cf65b378 703 SUPERFAMILY SSF143724 113 304 2.75E-54 T 18-10-2018 SHALO_1984 bf4f0ae50854e7de873e3c02cf65b378 703 Pfam PF02503 Polyphosphate kinase middle domain 128 319 7.2E-58 T 18-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 SHALO_1984 bf4f0ae50854e7de873e3c02cf65b378 703 Gene3D G3DSA:3.30.870.10 500 683 9.0E-65 T 18-10-2018 SHALO_1984 bf4f0ae50854e7de873e3c02cf65b378 703 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 10 672 9.3E-244 T 18-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 SHALO_2881 f8395e93356b9443abdba2a0dd2c3c5b 228 Gene3D G3DSA:3.40.50.300 1 228 1.3E-68 T 18-10-2018 SHALO_2881 f8395e93356b9443abdba2a0dd2c3c5b 228 SMART SM00382 30 219 1.7E-14 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_2881 f8395e93356b9443abdba2a0dd2c3c5b 228 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_2881 f8395e93356b9443abdba2a0dd2c3c5b 228 Pfam PF00005 ABC transporter 22 171 1.2E-33 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_2881 f8395e93356b9443abdba2a0dd2c3c5b 228 SUPERFAMILY SSF52540 1 225 1.3E-71 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_1835 cda3b385ceeea37b3dfdefef3c6d1036 969 Gene3D G3DSA:3.30.565.10 314 481 1.1E-44 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_1835 cda3b385ceeea37b3dfdefef3c6d1036 969 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 362 475 1.2E-26 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_1835 cda3b385ceeea37b3dfdefef3c6d1036 969 Gene3D G3DSA:3.40.50.2300 625 752 4.7E-38 T 18-10-2018 SHALO_1835 cda3b385ceeea37b3dfdefef3c6d1036 969 Gene3D G3DSA:1.10.287.130 219 313 2.0E-27 T 18-10-2018 SHALO_1835 cda3b385ceeea37b3dfdefef3c6d1036 969 Pfam PF00512 His Kinase A (phospho-acceptor) domain 251 315 5.3E-18 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_1835 cda3b385ceeea37b3dfdefef3c6d1036 969 SUPERFAMILY SSF47226 732 856 5.76E-14 T 18-10-2018 IPR036641 HPT domain superfamily GO:0000160 SHALO_1835 cda3b385ceeea37b3dfdefef3c6d1036 969 SMART SM00448 635 749 4.8E-34 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_1835 cda3b385ceeea37b3dfdefef3c6d1036 969 SMART SM00448 495 612 3.2E-7 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_1835 cda3b385ceeea37b3dfdefef3c6d1036 969 PRINTS PR00344 Bacterial sensor protein C-terminal signature 402 416 7.8E-12 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_1835 cda3b385ceeea37b3dfdefef3c6d1036 969 PRINTS PR00344 Bacterial sensor protein C-terminal signature 420 430 7.8E-12 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_1835 cda3b385ceeea37b3dfdefef3c6d1036 969 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 455 7.8E-12 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_1835 cda3b385ceeea37b3dfdefef3c6d1036 969 PRINTS PR00344 Bacterial sensor protein C-terminal signature 461 474 7.8E-12 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_1835 cda3b385ceeea37b3dfdefef3c6d1036 969 Gene3D G3DSA:1.20.120.160 773 885 1.4E-14 T 18-10-2018 IPR036641 HPT domain superfamily GO:0000160 SHALO_1835 cda3b385ceeea37b3dfdefef3c6d1036 969 SUPERFAMILY SSF47384 236 317 1.67E-21 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SHALO_1835 cda3b385ceeea37b3dfdefef3c6d1036 969 Pfam PF00072 Response regulator receiver domain 637 745 1.2E-23 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_1835 cda3b385ceeea37b3dfdefef3c6d1036 969 Pfam PF00072 Response regulator receiver domain 498 609 6.0E-9 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_1835 cda3b385ceeea37b3dfdefef3c6d1036 969 Gene3D G3DSA:3.40.50.2300 484 617 1.9E-12 T 18-10-2018 SHALO_1835 cda3b385ceeea37b3dfdefef3c6d1036 969 SMART SM00387 361 477 3.4E-32 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_1835 cda3b385ceeea37b3dfdefef3c6d1036 969 SUPERFAMILY SSF52172 493 618 2.56E-12 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_1835 cda3b385ceeea37b3dfdefef3c6d1036 969 SUPERFAMILY SSF52172 633 761 8.11E-36 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_1835 cda3b385ceeea37b3dfdefef3c6d1036 969 SMART SM00388 250 315 7.5E-23 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_1835 cda3b385ceeea37b3dfdefef3c6d1036 969 SUPERFAMILY SSF55874 304 475 1.26E-41 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_0248 bc724d28898559e7bf985f304cbc13a6 164 Gene3D G3DSA:2.30.30.40 31 154 5.1E-35 T 18-10-2018 SHALO_0248 bc724d28898559e7bf985f304cbc13a6 164 SUPERFAMILY SSF50341 24 162 3.27E-35 T 18-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 SHALO_0248 bc724d28898559e7bf985f304cbc13a6 164 Pfam PF01584 CheW-like domain 28 162 1.7E-34 T 18-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 SHALO_0248 bc724d28898559e7bf985f304cbc13a6 164 Gene3D G3DSA:2.40.50.180 47 155 5.1E-35 T 18-10-2018 SHALO_0248 bc724d28898559e7bf985f304cbc13a6 164 SMART SM00260 24 160 2.3E-35 T 18-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 SHALO_1615 bd58f4956dfeddc9d6054bc999bb3c0d 402 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 4 397 8.7E-136 T 18-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 SHALO_1615 bd58f4956dfeddc9d6054bc999bb3c0d 402 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 1 402 27.969 T 18-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 SHALO_1615 bd58f4956dfeddc9d6054bc999bb3c0d 402 Gene3D G3DSA:3.40.50.800 320 401 1.1E-13 T 18-10-2018 IPR036621 Anticodon-binding domain superfamily SHALO_1615 bd58f4956dfeddc9d6054bc999bb3c0d 402 SUPERFAMILY SSF52954 321 401 6.54E-14 T 18-10-2018 SHALO_1615 bd58f4956dfeddc9d6054bc999bb3c0d 402 Gene3D G3DSA:3.30.930.10 1 317 8.0E-106 T 18-10-2018 SHALO_1615 bd58f4956dfeddc9d6054bc999bb3c0d 402 Pfam PF13393 Histidyl-tRNA synthetase 7 307 1.1E-42 T 18-10-2018 SHALO_1615 bd58f4956dfeddc9d6054bc999bb3c0d 402 Pfam PF03129 Anticodon binding domain 343 400 2.4E-6 T 18-10-2018 IPR004154 Anticodon-binding SHALO_1615 bd58f4956dfeddc9d6054bc999bb3c0d 402 SUPERFAMILY SSF55681 2 312 1.99E-87 T 18-10-2018 SHALO_1615 bd58f4956dfeddc9d6054bc999bb3c0d 402 PIRSF PIRSF001549 1 402 5.2E-108 T 18-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 SHALO_2310 74fca5304163885786382d96d93a4a59 304 SUPERFAMILY SSF103481 53 153 1.57E-7 T 18-10-2018 SHALO_2310 74fca5304163885786382d96d93a4a59 304 Pfam PF00892 EamA-like transporter family 18 151 1.9E-10 T 18-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 SHALO_2310 74fca5304163885786382d96d93a4a59 304 Pfam PF00892 EamA-like transporter family 168 300 1.2E-12 T 18-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 SHALO_2310 74fca5304163885786382d96d93a4a59 304 SUPERFAMILY SSF103481 209 301 5.89E-12 T 18-10-2018 SHALO_0480 f060ee327643fad2cf709ef99587a30f 1508 Gene3D G3DSA:2.40.50.100 1167 1257 2.6E-16 T 18-10-2018 SHALO_0480 f060ee327643fad2cf709ef99587a30f 1508 Gene3D G3DSA:1.10.274.100 563 637 3.0E-15 T 18-10-2018 SHALO_0480 f060ee327643fad2cf709ef99587a30f 1508 Gene3D G3DSA:2.40.50.100 1282 1345 5.8E-63 T 18-10-2018 SHALO_0480 f060ee327643fad2cf709ef99587a30f 1508 Pfam PF04983 RNA polymerase Rpb1, domain 3 499 641 8.8E-29 T 18-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_0480 f060ee327643fad2cf709ef99587a30f 1508 SUPERFAMILY SSF64484 16 1495 0.0 T 18-10-2018 SHALO_0480 f060ee327643fad2cf709ef99587a30f 1508 Gene3D G3DSA:1.10.150.390 1446 1503 1.2E-23 T 18-10-2018 SHALO_0480 f060ee327643fad2cf709ef99587a30f 1508 Gene3D G3DSA:1.10.274.100 499 562 3.3E-22 T 18-10-2018 SHALO_0480 f060ee327643fad2cf709ef99587a30f 1508 Pfam PF04998 RNA polymerase Rpb1, domain 5 752 1402 4.3E-69 T 18-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_0480 f060ee327643fad2cf709ef99587a30f 1508 Gene3D G3DSA:1.10.40.90 384 426 7.9E-19 T 18-10-2018 SHALO_0480 f060ee327643fad2cf709ef99587a30f 1508 Pfam PF04997 RNA polymerase Rpb1, domain 1 16 352 2.6E-84 T 18-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_0480 f060ee327643fad2cf709ef99587a30f 1508 Gene3D G3DSA:1.10.132.30 638 776 4.0E-65 T 18-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_0480 f060ee327643fad2cf709ef99587a30f 1508 Pfam PF00623 RNA polymerase Rpb1, domain 2 354 407 4.4E-9 T 18-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_0480 f060ee327643fad2cf709ef99587a30f 1508 Pfam PF00623 RNA polymerase Rpb1, domain 2 397 495 5.5E-28 T 18-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_0480 f060ee327643fad2cf709ef99587a30f 1508 Pfam PF05000 RNA polymerase Rpb1, domain 4 670 749 1.3E-16 T 18-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_0480 f060ee327643fad2cf709ef99587a30f 1508 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 22 1497 0.0 T 18-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_0480 f060ee327643fad2cf709ef99587a30f 1508 SMART SM00663 245 524 4.7E-175 T 18-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_0480 f060ee327643fad2cf709ef99587a30f 1508 Gene3D G3DSA:1.10.1790.20 1266 1443 5.8E-63 T 18-10-2018 SHALO_0480 f060ee327643fad2cf709ef99587a30f 1508 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 11 1507 18.935 T 18-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_1137 5ab90d8330017ebee05711a105122b2e 395 SUPERFAMILY SSF53383 9 393 1.02E-96 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase SHALO_1137 5ab90d8330017ebee05711a105122b2e 395 Gene3D G3DSA:3.40.640.10 54 299 4.8E-117 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 SHALO_1137 5ab90d8330017ebee05711a105122b2e 395 Pfam PF00202 Aminotransferase class-III 19 389 1.1E-89 T 18-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SHALO_1137 5ab90d8330017ebee05711a105122b2e 395 PIRSF PIRSF000521 166 394 6.1E-25 T 18-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SHALO_1137 5ab90d8330017ebee05711a105122b2e 395 PIRSF PIRSF000521 4 162 9.7E-7 T 18-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SHALO_1137 5ab90d8330017ebee05711a105122b2e 395 Gene3D G3DSA:3.90.1150.10 7 382 4.8E-117 T 18-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 SHALO_1137 5ab90d8330017ebee05711a105122b2e 395 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 217 254 - T 18-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SHALO_2839 e215ade7bd029ab709fbfacb86831619 1025 SUPERFAMILY SSF82866 292 493 1.44E-41 T 18-10-2018 SHALO_2839 e215ade7bd029ab709fbfacb86831619 1025 Gene3D G3DSA:3.30.70.1320 135 323 1.0E-233 T 18-10-2018 SHALO_2839 e215ade7bd029ab709fbfacb86831619 1025 Gene3D G3DSA:1.20.1640.10 16 498 1.0E-233 T 18-10-2018 SHALO_2839 e215ade7bd029ab709fbfacb86831619 1025 Gene3D G3DSA:3.30.70.1430 42 807 1.0E-233 T 18-10-2018 SHALO_2839 e215ade7bd029ab709fbfacb86831619 1025 SUPERFAMILY SSF82866 794 1022 4.05E-41 T 18-10-2018 SHALO_2839 e215ade7bd029ab709fbfacb86831619 1025 SUPERFAMILY SSF82714 185 264 1.44E-12 T 18-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SHALO_2839 e215ade7bd029ab709fbfacb86831619 1025 Pfam PF00873 AcrB/AcrD/AcrF family 6 1019 3.0E-209 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SHALO_2839 e215ade7bd029ab709fbfacb86831619 1025 SUPERFAMILY SSF82714 711 791 6.02E-9 T 18-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SHALO_2839 e215ade7bd029ab709fbfacb86831619 1025 Gene3D G3DSA:3.30.70.1430 558 660 1.0E-233 T 18-10-2018 SHALO_2839 e215ade7bd029ab709fbfacb86831619 1025 Gene3D G3DSA:3.30.2090.10 712 799 1.0E-233 T 18-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SHALO_2839 e215ade7bd029ab709fbfacb86831619 1025 Gene3D G3DSA:3.30.70.1440 661 860 1.0E-233 T 18-10-2018 SHALO_2839 e215ade7bd029ab709fbfacb86831619 1025 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1021 3.5E-295 T 18-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 SHALO_2839 e215ade7bd029ab709fbfacb86831619 1025 Gene3D G3DSA:1.20.1640.10 499 1017 1.0E-233 T 18-10-2018 SHALO_2839 e215ade7bd029ab709fbfacb86831619 1025 Gene3D G3DSA:3.30.2090.10 180 272 1.0E-233 T 18-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SHALO_2839 e215ade7bd029ab709fbfacb86831619 1025 SUPERFAMILY SSF82693 138 322 1.41E-11 T 18-10-2018 SHALO_2839 e215ade7bd029ab709fbfacb86831619 1025 PRINTS PR00702 Acriflavin resistance protein family signature 383 407 1.2E-25 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SHALO_2839 e215ade7bd029ab709fbfacb86831619 1025 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 1.2E-25 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SHALO_2839 e215ade7bd029ab709fbfacb86831619 1025 PRINTS PR00702 Acriflavin resistance protein family signature 328 351 1.2E-25 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SHALO_2839 e215ade7bd029ab709fbfacb86831619 1025 PRINTS PR00702 Acriflavin resistance protein family signature 466 489 1.2E-25 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SHALO_2839 e215ade7bd029ab709fbfacb86831619 1025 PRINTS PR00702 Acriflavin resistance protein family signature 355 376 1.2E-25 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SHALO_2839 e215ade7bd029ab709fbfacb86831619 1025 SUPERFAMILY SSF82693 43 126 5.23E-15 T 18-10-2018 SHALO_2802 f0bf6d16ce5596617abd42ace4a724a4 222 SUPERFAMILY SSF52172 1 127 1.17E-34 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_2802 f0bf6d16ce5596617abd42ace4a724a4 222 SMART SM00448 2 113 3.4E-31 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_2802 f0bf6d16ce5596617abd42ace4a724a4 222 Gene3D G3DSA:3.40.50.2300 1 121 1.6E-30 T 18-10-2018 SHALO_2802 f0bf6d16ce5596617abd42ace4a724a4 222 Pfam PF00486 Transcriptional regulatory protein, C terminal 144 219 2.9E-17 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_2802 f0bf6d16ce5596617abd42ace4a724a4 222 SMART SM00862 143 219 5.4E-16 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_2802 f0bf6d16ce5596617abd42ace4a724a4 222 Pfam PF00072 Response regulator receiver domain 4 110 9.7E-23 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_2802 f0bf6d16ce5596617abd42ace4a724a4 222 Gene3D G3DSA:1.10.10.10 122 222 1.7E-25 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_2802 f0bf6d16ce5596617abd42ace4a724a4 222 SUPERFAMILY SSF46894 130 220 1.62E-20 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHALO_2566 f9cdba604ca91e07dc8899d0247bbebf 298 TIGRFAM TIGR00688 rarD: protein RarD 9 262 5.5E-68 T 18-10-2018 IPR004626 RarD protein GO:0005887 SHALO_2566 f9cdba604ca91e07dc8899d0247bbebf 298 SUPERFAMILY SSF103481 209 288 2.62E-5 T 18-10-2018 SHALO_2566 f9cdba604ca91e07dc8899d0247bbebf 298 Pfam PF00892 EamA-like transporter family 10 143 2.8E-9 T 18-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 SHALO_2566 f9cdba604ca91e07dc8899d0247bbebf 298 SUPERFAMILY SSF103481 44 143 6.67E-9 T 18-10-2018 SHALO_0424 39fc6c2de6c953a1f43e27dfd191250e 246 TIGRFAM TIGR01714 phage_rep_org_N: phage replisome organizer, putative, N-terminal region 7 121 2.7E-34 T 18-10-2018 IPR010056 Phage replisome organiser, N-terminal domain SHALO_0424 39fc6c2de6c953a1f43e27dfd191250e 246 Pfam PF09681 N-terminal phage replisome organiser (Phage_rep_org_N) 7 122 3.0E-31 T 18-10-2018 IPR010056 Phage replisome organiser, N-terminal domain SHALO_1155 ab9f14e7fdb3f3ae51cb2f8a4a57faa5 230 Pfam PF00072 Response regulator receiver domain 8 114 7.3E-21 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_1155 ab9f14e7fdb3f3ae51cb2f8a4a57faa5 230 SMART SM00448 5 116 2.8E-24 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_1155 ab9f14e7fdb3f3ae51cb2f8a4a57faa5 230 SUPERFAMILY SSF52172 5 187 2.28E-29 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_1155 ab9f14e7fdb3f3ae51cb2f8a4a57faa5 230 Gene3D G3DSA:3.40.50.2300 1 128 1.7E-26 T 18-10-2018 SHALO_1155 ab9f14e7fdb3f3ae51cb2f8a4a57faa5 230 Gene3D G3DSA:1.10.10.10 129 229 1.7E-17 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_1155 ab9f14e7fdb3f3ae51cb2f8a4a57faa5 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 225 1.3E-13 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_1155 ab9f14e7fdb3f3ae51cb2f8a4a57faa5 230 SMART SM00862 154 225 5.8E-10 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_2912 dd4c2c0ab62b8b91125d2c7353b9908d 353 Pfam PF08666 SAF domain 288 344 1.7E-7 T 18-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 SHALO_2912 dd4c2c0ab62b8b91125d2c7353b9908d 353 Gene3D G3DSA:3.20.20.70 1 272 1.2E-93 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_2912 dd4c2c0ab62b8b91125d2c7353b9908d 353 Pfam PF03102 NeuB family 34 271 5.2E-94 T 18-10-2018 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 Reactome: R-HSA-4085001 SHALO_2912 dd4c2c0ab62b8b91125d2c7353b9908d 353 SUPERFAMILY SSF51569 10 299 1.71E-86 T 18-10-2018 SHALO_2912 dd4c2c0ab62b8b91125d2c7353b9908d 353 SUPERFAMILY SSF51269 285 344 8.79E-18 T 18-10-2018 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily Reactome: R-HSA-4085001 SHALO_2912 dd4c2c0ab62b8b91125d2c7353b9908d 353 TIGRFAM TIGR03586 PseI: pseudaminic acid synthase 13 339 7.8E-153 T 18-10-2018 IPR020030 Pseudaminic acid biosynthesis, PseI KEGG: 00520+2.5.1.97|MetaCyc: PWY-6143 SHALO_2912 dd4c2c0ab62b8b91125d2c7353b9908d 353 SMART SM00858 287 345 2.9E-5 T 18-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 SHALO_2912 dd4c2c0ab62b8b91125d2c7353b9908d 353 Gene3D G3DSA:3.90.1210.10 288 348 1.1E-20 T 18-10-2018 SHALO_1418 5296eb081ce64dde6f34dd8b6c0d861b 312 Pfam PF02618 YceG-like family 41 311 1.1E-56 T 18-10-2018 IPR003770 Endolytic murein transglycosylase SHALO_1418 5296eb081ce64dde6f34dd8b6c0d861b 312 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 6 312 26.347 T 18-10-2018 IPR003770 Endolytic murein transglycosylase SHALO_1418 5296eb081ce64dde6f34dd8b6c0d861b 312 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 98 310 3.4E-41 T 18-10-2018 IPR003770 Endolytic murein transglycosylase SHALO_1939 42b6cec6fed72d0cc05ba3ae7b336b82 295 Gene3D G3DSA:3.20.20.60 4 295 1.1E-99 T 18-10-2018 SHALO_1939 42b6cec6fed72d0cc05ba3ae7b336b82 295 SUPERFAMILY SSF51621 7 289 1.97E-98 T 18-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 SHALO_1939 42b6cec6fed72d0cc05ba3ae7b336b82 295 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 4 291 47.876 T 18-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 SHALO_1939 42b6cec6fed72d0cc05ba3ae7b336b82 295 Pfam PF13714 Phosphoenolpyruvate phosphomutase 11 254 7.6E-51 T 18-10-2018 SHALO_1939 42b6cec6fed72d0cc05ba3ae7b336b82 295 ProSitePatterns PS00161 Isocitrate lyase signature. 120 125 - T 18-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 SHALO_1939 42b6cec6fed72d0cc05ba3ae7b336b82 295 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 7 290 6.3E-133 T 18-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 SHALO_2099 3c572ee98b20dafd7be91a8d693f01aa 228 Gene3D G3DSA:1.10.10.10 164 224 3.9E-5 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_2099 3c572ee98b20dafd7be91a8d693f01aa 228 SUPERFAMILY SSF46785 163 207 5.01E-6 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SHALO_2099 3c572ee98b20dafd7be91a8d693f01aa 228 Pfam PF08279 HTH domain 163 201 3.4E-5 T 18-10-2018 IPR013196 Helix-turn-helix, type 11 SHALO_2099 3c572ee98b20dafd7be91a8d693f01aa 228 SUPERFAMILY SSF52172 1 131 2.13E-29 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_2099 3c572ee98b20dafd7be91a8d693f01aa 228 Pfam PF00072 Response regulator receiver domain 4 108 8.7E-21 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_2099 3c572ee98b20dafd7be91a8d693f01aa 228 Gene3D G3DSA:3.40.50.2300 1 146 5.9E-25 T 18-10-2018 SHALO_2099 3c572ee98b20dafd7be91a8d693f01aa 228 SMART SM00448 2 115 7.2E-21 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_2099 3c572ee98b20dafd7be91a8d693f01aa 228 PIRSF PIRSF006171 1 228 6.0E-80 T 18-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 SHALO_1953 104493e72372b880eb89939c2bfff4c3 227 Pfam PF03358 NADPH-dependent FMN reductase 1 113 9.8E-26 T 18-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 SHALO_1953 104493e72372b880eb89939c2bfff4c3 227 SUPERFAMILY SSF52218 1 213 2.02E-39 T 18-10-2018 IPR029039 Flavoprotein-like superfamily SHALO_1953 104493e72372b880eb89939c2bfff4c3 227 Gene3D G3DSA:3.40.50.360 1 156 3.2E-36 T 18-10-2018 IPR029039 Flavoprotein-like superfamily SHALO_1972 d6499b5223071aa704bc7dd1649b52b9 269 Pfam PF15436 Plasminogen-binding protein pgbA N-terminal 27 238 4.9E-66 T 18-10-2018 IPR029276 Plasminogen-binding protein PgbA, N-terminal SHALO_2735 280ff9e084d441f3543afb4426982c46 325 Gene3D G3DSA:3.40.50.150 2 215 4.9E-9 T 18-10-2018 SHALO_2735 280ff9e084d441f3543afb4426982c46 325 Gene3D G3DSA:1.10.1020.10 59 180 4.9E-9 T 18-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 SHALO_2735 280ff9e084d441f3543afb4426982c46 325 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 3 286 5.5E-47 T 18-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 SHALO_2735 280ff9e084d441f3543afb4426982c46 325 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 203 209 - T 18-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SHALO_2735 280ff9e084d441f3543afb4426982c46 325 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 2.3E-14 T 18-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 SHALO_2735 280ff9e084d441f3543afb4426982c46 325 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 200 212 2.3E-14 T 18-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 SHALO_2735 280ff9e084d441f3543afb4426982c46 325 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 52 65 2.3E-14 T 18-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 SHALO_2735 280ff9e084d441f3543afb4426982c46 325 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 3 19 2.3E-14 T 18-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 SHALO_2735 280ff9e084d441f3543afb4426982c46 325 SUPERFAMILY SSF53335 2 281 3.33E-42 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_3014 f3db145a2908e38c2f103ebb174b72b2 599 Gene3D G3DSA:3.30.70.870 305 587 4.1E-123 T 18-10-2018 SHALO_3014 f3db145a2908e38c2f103ebb174b72b2 599 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 43 58 - T 18-10-2018 IPR031157 Tr-type G domain, conserved site SHALO_3014 f3db145a2908e38c2f103ebb174b72b2 599 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 146 3.2E-25 T 18-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 SHALO_3014 f3db145a2908e38c2f103ebb174b72b2 599 PRINTS PR00315 GTP-binding elongation factor signature 122 131 1.4E-14 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHALO_3014 f3db145a2908e38c2f103ebb174b72b2 599 PRINTS PR00315 GTP-binding elongation factor signature 86 97 1.4E-14 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHALO_3014 f3db145a2908e38c2f103ebb174b72b2 599 PRINTS PR00315 GTP-binding elongation factor signature 6 19 1.4E-14 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHALO_3014 f3db145a2908e38c2f103ebb174b72b2 599 PRINTS PR00315 GTP-binding elongation factor signature 50 58 1.4E-14 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHALO_3014 f3db145a2908e38c2f103ebb174b72b2 599 PRINTS PR00315 GTP-binding elongation factor signature 70 80 1.4E-14 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHALO_3014 f3db145a2908e38c2f103ebb174b72b2 599 Gene3D G3DSA:2.40.50.250 480 596 4.1E-123 T 18-10-2018 SHALO_3014 f3db145a2908e38c2f103ebb174b72b2 599 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 4 596 5.3E-285 T 18-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 SHALO_3014 f3db145a2908e38c2f103ebb174b72b2 599 Gene3D G3DSA:3.30.70.240 387 479 4.1E-123 T 18-10-2018 SHALO_3014 f3db145a2908e38c2f103ebb174b72b2 599 Gene3D G3DSA:2.40.30.10 199 298 2.2E-29 T 18-10-2018 SHALO_3014 f3db145a2908e38c2f103ebb174b72b2 599 Pfam PF00679 Elongation factor G C-terminus 394 479 4.9E-22 T 18-10-2018 IPR000640 Elongation factor EFG, domain V-like SHALO_3014 f3db145a2908e38c2f103ebb174b72b2 599 SMART SM00838 393 481 0.0042 T 18-10-2018 IPR000640 Elongation factor EFG, domain V-like SHALO_3014 f3db145a2908e38c2f103ebb174b72b2 599 SUPERFAMILY SSF50447 179 300 3.09E-31 T 18-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily SHALO_3014 f3db145a2908e38c2f103ebb174b72b2 599 SUPERFAMILY SSF54980 396 509 1.44E-26 T 18-10-2018 IPR035647 EF-G domain III/V-like SHALO_3014 f3db145a2908e38c2f103ebb174b72b2 599 Pfam PF00009 Elongation factor Tu GTP binding domain 3 194 1.7E-54 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHALO_3014 f3db145a2908e38c2f103ebb174b72b2 599 Pfam PF03144 Elongation factor Tu domain 2 218 287 1.6E-11 T 18-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 SHALO_3014 f3db145a2908e38c2f103ebb174b72b2 599 Gene3D G3DSA:3.40.50.300 1 197 2.1E-66 T 18-10-2018 SHALO_3014 f3db145a2908e38c2f103ebb174b72b2 599 SUPERFAMILY SSF52540 3 218 1.33E-54 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_3014 f3db145a2908e38c2f103ebb174b72b2 599 SUPERFAMILY SSF54980 302 385 1.37E-8 T 18-10-2018 IPR035647 EF-G domain III/V-like SHALO_1637 7a9ae4912a5980a0a17a8a883e86ce45 728 Gene3D G3DSA:1.10.287.130 485 568 9.7E-13 T 18-10-2018 SHALO_1637 7a9ae4912a5980a0a17a8a883e86ce45 728 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 614 723 2.5E-17 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_1637 7a9ae4912a5980a0a17a8a883e86ce45 728 SUPERFAMILY SSF55874 571 719 4.06E-24 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_1637 7a9ae4912a5980a0a17a8a883e86ce45 728 Gene3D G3DSA:3.40.50.2300 141 297 1.3E-9 T 18-10-2018 SHALO_1637 7a9ae4912a5980a0a17a8a883e86ce45 728 SUPERFAMILY SSF47384 497 568 1.1E-9 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SHALO_1637 7a9ae4912a5980a0a17a8a883e86ce45 728 Pfam PF04392 ABC transporter substrate binding protein 111 311 1.4E-9 T 18-10-2018 IPR007487 ABC transporter, substrate-binding protein SHALO_1637 7a9ae4912a5980a0a17a8a883e86ce45 728 PRINTS PR00344 Bacterial sensor protein C-terminal signature 685 703 1.0E-7 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_1637 7a9ae4912a5980a0a17a8a883e86ce45 728 PRINTS PR00344 Bacterial sensor protein C-terminal signature 656 670 1.0E-7 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_1637 7a9ae4912a5980a0a17a8a883e86ce45 728 PRINTS PR00344 Bacterial sensor protein C-terminal signature 674 684 1.0E-7 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_1637 7a9ae4912a5980a0a17a8a883e86ce45 728 SUPERFAMILY SSF55785 355 476 1.12E-11 T 18-10-2018 IPR035965 PAS domain superfamily SHALO_1637 7a9ae4912a5980a0a17a8a883e86ce45 728 SMART SM00387 612 725 1.9E-14 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_1637 7a9ae4912a5980a0a17a8a883e86ce45 728 Pfam PF13426 PAS domain 383 477 1.1E-5 T 18-10-2018 IPR000014 PAS domain SHALO_1637 7a9ae4912a5980a0a17a8a883e86ce45 728 Gene3D G3DSA:3.30.450.20 360 484 3.7E-15 T 18-10-2018 SHALO_1637 7a9ae4912a5980a0a17a8a883e86ce45 728 Gene3D G3DSA:3.40.50.2300 80 294 1.3E-9 T 18-10-2018 SHALO_1637 7a9ae4912a5980a0a17a8a883e86ce45 728 Gene3D G3DSA:3.30.565.10 570 725 3.6E-29 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_0920 cfe5372ac43ecdcaf5cf557c7f4fc5dc 711 SUPERFAMILY SSF48452 12 146 2.28E-25 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SHALO_0920 cfe5372ac43ecdcaf5cf557c7f4fc5dc 711 SUPERFAMILY SSF53756 441 704 2.95E-24 T 18-10-2018 SHALO_0920 cfe5372ac43ecdcaf5cf557c7f4fc5dc 711 Gene3D G3DSA:1.25.40.10 1 83 4.3E-14 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SHALO_0920 cfe5372ac43ecdcaf5cf557c7f4fc5dc 711 Gene3D G3DSA:1.25.40.10 274 319 3.4E-17 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SHALO_0920 cfe5372ac43ecdcaf5cf557c7f4fc5dc 711 Gene3D G3DSA:1.25.40.10 181 273 2.5E-31 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SHALO_0920 cfe5372ac43ecdcaf5cf557c7f4fc5dc 711 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 627 657 7.3E-5 T 18-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 SHALO_0920 cfe5372ac43ecdcaf5cf557c7f4fc5dc 711 Gene3D G3DSA:1.25.40.10 359 426 5.2E-13 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SHALO_0920 cfe5372ac43ecdcaf5cf557c7f4fc5dc 711 Gene3D G3DSA:1.25.40.10 120 180 3.3E-17 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SHALO_0920 cfe5372ac43ecdcaf5cf557c7f4fc5dc 711 Pfam PF13432 Tetratricopeptide repeat 19 77 1.3E-4 T 18-10-2018 SHALO_0920 cfe5372ac43ecdcaf5cf557c7f4fc5dc 711 SMART SM00028 82 114 0.0024 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_0920 cfe5372ac43ecdcaf5cf557c7f4fc5dc 711 SMART SM00028 353 386 3.5E-7 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_0920 cfe5372ac43ecdcaf5cf557c7f4fc5dc 711 SMART SM00028 285 318 5.1E-9 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_0920 cfe5372ac43ecdcaf5cf557c7f4fc5dc 711 SMART SM00028 14 47 0.11 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_0920 cfe5372ac43ecdcaf5cf557c7f4fc5dc 711 SMART SM00028 48 81 0.0094 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_0920 cfe5372ac43ecdcaf5cf557c7f4fc5dc 711 SMART SM00028 149 182 3.5E-5 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_0920 cfe5372ac43ecdcaf5cf557c7f4fc5dc 711 SMART SM00028 217 250 1.4E-4 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_0920 cfe5372ac43ecdcaf5cf557c7f4fc5dc 711 SMART SM00028 319 352 1.5E-7 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_0920 cfe5372ac43ecdcaf5cf557c7f4fc5dc 711 SMART SM00028 251 284 4.2E-9 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_0920 cfe5372ac43ecdcaf5cf557c7f4fc5dc 711 SMART SM00028 115 148 1.3E-7 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_0920 cfe5372ac43ecdcaf5cf557c7f4fc5dc 711 SMART SM00028 183 216 8.5E-9 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_0920 cfe5372ac43ecdcaf5cf557c7f4fc5dc 711 Pfam PF13181 Tetratricopeptide repeat 218 249 0.0016 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_0920 cfe5372ac43ecdcaf5cf557c7f4fc5dc 711 Gene3D G3DSA:1.25.40.10 84 119 7.9E-12 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SHALO_0920 cfe5372ac43ecdcaf5cf557c7f4fc5dc 711 Gene3D G3DSA:1.25.40.10 320 358 7.8E-13 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SHALO_0920 cfe5372ac43ecdcaf5cf557c7f4fc5dc 711 Pfam PF13414 TPR repeat 122 162 1.2E-12 T 18-10-2018 SHALO_0920 cfe5372ac43ecdcaf5cf557c7f4fc5dc 711 Pfam PF13414 TPR repeat 329 367 6.2E-11 T 18-10-2018 SHALO_0920 cfe5372ac43ecdcaf5cf557c7f4fc5dc 711 Gene3D G3DSA:3.40.50.2000 577 676 3.1E-7 T 18-10-2018 SHALO_0920 cfe5372ac43ecdcaf5cf557c7f4fc5dc 711 SUPERFAMILY SSF48452 111 290 6.45E-47 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SHALO_0920 cfe5372ac43ecdcaf5cf557c7f4fc5dc 711 Pfam PF00515 Tetratricopeptide repeat 84 113 3.9E-7 T 18-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 SHALO_0920 cfe5372ac43ecdcaf5cf557c7f4fc5dc 711 Pfam PF00515 Tetratricopeptide repeat 285 318 1.2E-10 T 18-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 SHALO_0920 cfe5372ac43ecdcaf5cf557c7f4fc5dc 711 Pfam PF00515 Tetratricopeptide repeat 251 284 3.2E-11 T 18-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 SHALO_0920 cfe5372ac43ecdcaf5cf557c7f4fc5dc 711 Pfam PF00515 Tetratricopeptide repeat 183 216 2.0E-10 T 18-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 SHALO_0920 cfe5372ac43ecdcaf5cf557c7f4fc5dc 711 SUPERFAMILY SSF48452 248 412 1.18E-43 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SHALO_0454 318375ca62a4543b1b13e5383e8943e6 286 SUPERFAMILY SSF103481 187 274 1.09E-9 T 18-10-2018 SHALO_0454 318375ca62a4543b1b13e5383e8943e6 286 Pfam PF00892 EamA-like transporter family 15 137 1.6E-7 T 18-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 SHALO_0454 318375ca62a4543b1b13e5383e8943e6 286 Pfam PF00892 EamA-like transporter family 148 273 1.1E-6 T 18-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 SHALO_0454 318375ca62a4543b1b13e5383e8943e6 286 SUPERFAMILY SSF103481 57 140 9.02E-11 T 18-10-2018 SHALO_1004 0c5460030e29246441b565f94214bf90 546 Gene3D G3DSA:1.10.560.10 7 519 7.2E-233 T 18-10-2018 IPR027413 GroEL-like equatorial domain superfamily SHALO_1004 0c5460030e29246441b565f94214bf90 546 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 525 1.1E-256 T 18-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 SHALO_1004 0c5460030e29246441b565f94214bf90 546 SUPERFAMILY SSF52029 184 375 4.01E-84 T 18-10-2018 IPR027409 GroEL-like apical domain superfamily SHALO_1004 0c5460030e29246441b565f94214bf90 546 SUPERFAMILY SSF48592 6 519 1.98E-75 T 18-10-2018 IPR027413 GroEL-like equatorial domain superfamily SHALO_1004 0c5460030e29246441b565f94214bf90 546 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 521 2.3E-101 T 18-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 SHALO_1004 0c5460030e29246441b565f94214bf90 546 Gene3D G3DSA:3.50.7.10 191 371 7.2E-233 T 18-10-2018 IPR027409 GroEL-like apical domain superfamily SHALO_1004 0c5460030e29246441b565f94214bf90 546 Hamap MF_00600 60 kDa chaperonin [groL]. 1 545 41.789 T 18-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 SHALO_1004 0c5460030e29246441b565f94214bf90 546 PRINTS PR00298 60kDa chaperonin signature 82 109 8.9E-72 T 18-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 SHALO_1004 0c5460030e29246441b565f94214bf90 546 PRINTS PR00298 60kDa chaperonin signature 267 290 8.9E-72 T 18-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 SHALO_1004 0c5460030e29246441b565f94214bf90 546 PRINTS PR00298 60kDa chaperonin signature 349 374 8.9E-72 T 18-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 SHALO_1004 0c5460030e29246441b565f94214bf90 546 PRINTS PR00298 60kDa chaperonin signature 26 52 8.9E-72 T 18-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 SHALO_1004 0c5460030e29246441b565f94214bf90 546 PRINTS PR00298 60kDa chaperonin signature 397 418 8.9E-72 T 18-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 SHALO_1004 0c5460030e29246441b565f94214bf90 546 SUPERFAMILY SSF54849 137 203 3.66E-25 T 18-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily SHALO_1004 0c5460030e29246441b565f94214bf90 546 ProSitePatterns PS00296 Chaperonins cpn60 signature. 404 415 - T 18-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 SHALO_1004 0c5460030e29246441b565f94214bf90 546 Gene3D G3DSA:3.30.260.10 135 409 7.2E-233 T 18-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily SHALO_0205 d60b8a79711d13df929b1d817f692e5d 384 Pfam PF00994 Probable molybdopterin binding domain 171 299 9.3E-17 T 18-10-2018 IPR001453 MoaB/Mog domain SHALO_0205 d60b8a79711d13df929b1d817f692e5d 384 SUPERFAMILY SSF53218 166 308 2.75E-25 T 18-10-2018 IPR036425 MoaB/Mog-like domain superfamily SHALO_0205 d60b8a79711d13df929b1d817f692e5d 384 Pfam PF03453 MoeA N-terminal region (domain I and II) 3 157 3.2E-26 T 18-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 SHALO_0205 d60b8a79711d13df929b1d817f692e5d 384 SUPERFAMILY SSF63882 3 165 1.31E-30 T 18-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 SHALO_0205 d60b8a79711d13df929b1d817f692e5d 384 SMART SM00852 170 299 6.2E-14 T 18-10-2018 IPR001453 MoaB/Mog domain SHALO_0205 d60b8a79711d13df929b1d817f692e5d 384 Gene3D G3DSA:2.40.340.10 309 373 9.3E-63 T 18-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 SHALO_0205 d60b8a79711d13df929b1d817f692e5d 384 Gene3D G3DSA:2.170.190.11 46 131 9.3E-63 T 18-10-2018 SHALO_0205 d60b8a79711d13df929b1d817f692e5d 384 Gene3D G3DSA:3.90.105.10 23 164 9.3E-63 T 18-10-2018 SHALO_0205 d60b8a79711d13df929b1d817f692e5d 384 Gene3D G3DSA:3.40.980.10 165 308 9.3E-63 T 18-10-2018 IPR036425 MoaB/Mog-like domain superfamily SHALO_0862 b5b1f8efcd569d785e39becf602473cf 549 Pfam PF02652 L-lactate permease 17 538 4.3E-206 T 18-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 SHALO_0862 b5b1f8efcd569d785e39becf602473cf 549 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 6 542 1.1E-217 T 18-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 SHALO_2792 9cd467c8d5bd53e6475cf90883a84be9 356 SUPERFAMILY SSF54862 28 88 5.12E-12 T 18-10-2018 SHALO_2792 9cd467c8d5bd53e6475cf90883a84be9 356 Pfam PF12838 4Fe-4S dicluster domain 260 308 2.1E-8 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_2792 9cd467c8d5bd53e6475cf90883a84be9 356 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 55 66 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_2792 9cd467c8d5bd53e6475cf90883a84be9 356 Gene3D G3DSA:3.30.70.20 8 88 1.3E-10 T 18-10-2018 SHALO_2792 9cd467c8d5bd53e6475cf90883a84be9 356 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 261 272 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_2792 9cd467c8d5bd53e6475cf90883a84be9 356 SUPERFAMILY SSF54862 252 317 6.8E-15 T 18-10-2018 SHALO_2792 9cd467c8d5bd53e6475cf90883a84be9 356 Pfam PF00037 4Fe-4S binding domain 49 71 1.3E-6 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_2792 9cd467c8d5bd53e6475cf90883a84be9 356 Gene3D G3DSA:3.30.70.20 254 324 2.4E-11 T 18-10-2018 SHALO_2446 474818e51a955ce789f0149ba1daefa5 220 SUPERFAMILY SSF52540 3 216 1.41E-63 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_2446 474818e51a955ce789f0149ba1daefa5 220 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_2446 474818e51a955ce789f0149ba1daefa5 220 Pfam PF00005 ABC transporter 20 165 1.2E-32 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_2446 474818e51a955ce789f0149ba1daefa5 220 SMART SM00382 29 213 3.0E-9 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_2446 474818e51a955ce789f0149ba1daefa5 220 Gene3D G3DSA:3.40.50.300 2 218 7.6E-64 T 18-10-2018 SHALO_1323 dc7a448889b9bd045bbaccd374ea54b6 200 Gene3D G3DSA:3.30.70.270 41 200 4.1E-49 T 18-10-2018 SHALO_1323 dc7a448889b9bd045bbaccd374ea54b6 200 Pfam PF00990 Diguanylate cyclase, GGDEF domain 44 194 1.2E-43 T 18-10-2018 IPR000160 GGDEF domain SHALO_1323 dc7a448889b9bd045bbaccd374ea54b6 200 SMART SM00267 32 198 3.2E-53 T 18-10-2018 IPR000160 GGDEF domain SHALO_1323 dc7a448889b9bd045bbaccd374ea54b6 200 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 39 196 1.2E-44 T 18-10-2018 IPR000160 GGDEF domain SHALO_1323 dc7a448889b9bd045bbaccd374ea54b6 200 SUPERFAMILY SSF55073 48 199 5.89E-46 T 18-10-2018 IPR029787 Nucleotide cyclase SHALO_1795 67587c5afa1f8665030d7158c8f1dc80 273 Pfam PF05175 Methyltransferase small domain 104 190 7.2E-16 T 18-10-2018 IPR007848 Methyltransferase small domain GO:0008168 SHALO_1795 67587c5afa1f8665030d7158c8f1dc80 273 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 24 265 2.6E-62 T 18-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 SHALO_1795 67587c5afa1f8665030d7158c8f1dc80 273 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 181 187 - T 18-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SHALO_1795 67587c5afa1f8665030d7158c8f1dc80 273 Gene3D G3DSA:3.40.50.150 79 272 6.2E-50 T 18-10-2018 SHALO_1795 67587c5afa1f8665030d7158c8f1dc80 273 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 16 270 7.2E-63 T 18-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 SHALO_1795 67587c5afa1f8665030d7158c8f1dc80 273 SUPERFAMILY SSF53335 7 223 8.06E-46 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_1795 67587c5afa1f8665030d7158c8f1dc80 273 Gene3D G3DSA:1.10.8.10 1 78 2.5E-18 T 18-10-2018 SHALO_0448 aa0465939d20e64a1a20721c218fd8eb 140 PIRSF PIRSF000077 35 140 7.2E-30 T 18-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SHALO_0448 aa0465939d20e64a1a20721c218fd8eb 140 PRINTS PR00421 Thioredoxin family signature 104 115 1.9E-8 T 18-10-2018 SHALO_0448 aa0465939d20e64a1a20721c218fd8eb 140 PRINTS PR00421 Thioredoxin family signature 56 64 1.9E-8 T 18-10-2018 SHALO_0448 aa0465939d20e64a1a20721c218fd8eb 140 PRINTS PR00421 Thioredoxin family signature 64 73 1.9E-8 T 18-10-2018 SHALO_0448 aa0465939d20e64a1a20721c218fd8eb 140 SUPERFAMILY SSF52833 28 140 3.31E-36 T 18-10-2018 IPR036249 Thioredoxin-like superfamily SHALO_0448 aa0465939d20e64a1a20721c218fd8eb 140 Gene3D G3DSA:3.40.30.10 37 140 2.6E-32 T 18-10-2018 SHALO_0448 aa0465939d20e64a1a20721c218fd8eb 140 Gene3D G3DSA:2.20.28.140 1 34 5.5E-10 T 18-10-2018 SHALO_0448 aa0465939d20e64a1a20721c218fd8eb 140 Pfam PF00085 Thioredoxin 41 137 4.5E-28 T 18-10-2018 IPR013766 Thioredoxin domain GO:0045454 SHALO_0448 aa0465939d20e64a1a20721c218fd8eb 140 TIGRFAM TIGR01068 thioredoxin: thioredoxin 45 138 7.3E-32 T 18-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SHALO_0448 aa0465939d20e64a1a20721c218fd8eb 140 ProSitePatterns PS00194 Thioredoxin family active site. 57 75 - T 18-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 SHALO_1698 bc0579f683c88588caea13224459418d 429 Pfam PF01546 Peptidase family M20/M25/M40 57 425 1.3E-8 T 18-10-2018 IPR002933 Peptidase M20 GO:0016787 SHALO_1698 bc0579f683c88588caea13224459418d 429 Gene3D G3DSA:3.40.630.10 315 429 2.7E-10 T 18-10-2018 SHALO_1698 bc0579f683c88588caea13224459418d 429 SUPERFAMILY SSF53187 1 426 2.46E-38 T 18-10-2018 SHALO_1698 bc0579f683c88588caea13224459418d 429 Gene3D G3DSA:3.40.630.10 1 195 2.1E-41 T 18-10-2018 SHALO_1698 bc0579f683c88588caea13224459418d 429 PRINTS PR00934 X-His dipeptidase (M25) signature 78 96 5.1E-9 T 18-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 SHALO_1698 bc0579f683c88588caea13224459418d 429 PRINTS PR00934 X-His dipeptidase (M25) signature 219 238 5.1E-9 T 18-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 SHALO_0798 af170c2bcb4f2555c97b740f08eb7ef5 335 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 6 334 45.252 T 18-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 SHALO_0798 af170c2bcb4f2555c97b740f08eb7ef5 335 SUPERFAMILY SSF46589 12 95 1.46E-13 T 18-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 SHALO_0798 af170c2bcb4f2555c97b740f08eb7ef5 335 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 18 84 1.2E-12 T 18-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 SHALO_0798 af170c2bcb4f2555c97b740f08eb7ef5 335 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 334 3.0E-100 T 18-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 SHALO_0798 af170c2bcb4f2555c97b740f08eb7ef5 335 Pfam PF01409 tRNA synthetases class II core domain (F) 90 334 4.3E-98 T 18-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 SHALO_0798 af170c2bcb4f2555c97b740f08eb7ef5 335 Gene3D G3DSA:3.30.930.10 6 335 1.2E-108 T 18-10-2018 SHALO_0798 af170c2bcb4f2555c97b740f08eb7ef5 335 SUPERFAMILY SSF55681 90 335 2.03E-73 T 18-10-2018 SHALO_2227 1dc57a373ca5ca10b742ee5e7e51ba07 257 TIGRFAM TIGR02623 G1P_cyt_trans: glucose-1-phosphate cytidylyltransferase 1 257 3.1E-128 T 18-10-2018 IPR013446 Glucose-1-phosphate cytidylyltransferase GO:0047343 KEGG: 00500+2.7.7.33|KEGG: 00520+2.7.7.33|MetaCyc: PWY-5833|MetaCyc: PWY-5940 SHALO_2227 1dc57a373ca5ca10b742ee5e7e51ba07 257 Pfam PF00483 Nucleotidyl transferase 3 202 9.0E-19 T 18-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 SHALO_2227 1dc57a373ca5ca10b742ee5e7e51ba07 257 SUPERFAMILY SSF53448 1 257 2.7E-67 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_2227 1dc57a373ca5ca10b742ee5e7e51ba07 257 Gene3D G3DSA:3.90.550.10 1 257 2.5E-72 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_0308 337157bfdbbc0fb7bcaef9ce4b9d1a2e 190 Pfam PF13247 4Fe-4S dicluster domain 53 148 6.8E-19 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_0308 337157bfdbbc0fb7bcaef9ce4b9d1a2e 190 SUPERFAMILY SSF54862 3 184 4.4E-61 T 18-10-2018 SHALO_0308 337157bfdbbc0fb7bcaef9ce4b9d1a2e 190 Gene3D G3DSA:3.30.70.20 5 180 4.6E-57 T 18-10-2018 SHALO_0308 337157bfdbbc0fb7bcaef9ce4b9d1a2e 190 Gene3D G3DSA:3.30.70.20 66 118 4.6E-57 T 18-10-2018 SHALO_0308 337157bfdbbc0fb7bcaef9ce4b9d1a2e 190 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 92 103 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_0761 016e9691d6f559f11cca89b4b8909590 599 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 381 533 6.8E-42 T 18-10-2018 IPR001162 UvrC family homology region SHALO_0761 016e9691d6f559f11cca89b4b8909590 599 SUPERFAMILY SSF47781 513 596 3.5E-13 T 18-10-2018 IPR010994 RuvA domain 2-like SHALO_0761 016e9691d6f559f11cca89b4b8909590 599 Gene3D G3DSA:3.30.420.340 373 539 1.6E-42 T 18-10-2018 IPR038476 UvrC homology region 2 superfamily SHALO_0761 016e9691d6f559f11cca89b4b8909590 599 SUPERFAMILY SSF82771 13 102 9.42E-18 T 18-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 SHALO_0761 016e9691d6f559f11cca89b4b8909590 599 Pfam PF02151 UvrB/uvrC motif 211 236 8.1E-7 T 18-10-2018 IPR001943 UVR domain GO:0005515 SHALO_0761 016e9691d6f559f11cca89b4b8909590 599 SMART SM00465 12 100 2.9E-21 T 18-10-2018 IPR000305 GIY-YIG endonuclease SHALO_0761 016e9691d6f559f11cca89b4b8909590 599 Pfam PF01541 GIY-YIG catalytic domain 13 95 4.2E-9 T 18-10-2018 IPR000305 GIY-YIG endonuclease SHALO_0761 016e9691d6f559f11cca89b4b8909590 599 Hamap MF_00203 UvrABC system protein C [uvrC]. 1 596 23.3 T 18-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 SHALO_0761 016e9691d6f559f11cca89b4b8909590 599 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 2 580 5.1E-164 T 18-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 SHALO_0761 016e9691d6f559f11cca89b4b8909590 599 Gene3D G3DSA:3.40.1440.10 1 104 1.2E-31 T 18-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 SHALO_0761 016e9691d6f559f11cca89b4b8909590 599 SUPERFAMILY SSF46600 199 237 1.03E-7 T 18-10-2018 IPR036876 UVR domain superfamily SHALO_0761 016e9691d6f559f11cca89b4b8909590 599 Gene3D G3DSA:1.10.150.20 540 594 1.9E-7 T 18-10-2018 SHALO_1869 5320d03d0071fdb563b99cc77ae68fe5 328 Pfam PF12833 Helix-turn-helix domain 249 326 6.9E-20 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_1869 5320d03d0071fdb563b99cc77ae68fe5 328 SUPERFAMILY SSF46689 279 326 1.21E-10 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SHALO_1869 5320d03d0071fdb563b99cc77ae68fe5 328 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 279 320 - T 18-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 SHALO_1869 5320d03d0071fdb563b99cc77ae68fe5 328 SUPERFAMILY SSF46689 227 276 4.3E-6 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SHALO_1869 5320d03d0071fdb563b99cc77ae68fe5 328 SMART SM00342 242 324 1.3E-22 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_1869 5320d03d0071fdb563b99cc77ae68fe5 328 Gene3D G3DSA:1.10.10.60 222 327 3.9E-25 T 18-10-2018 SHALO_1869 5320d03d0071fdb563b99cc77ae68fe5 328 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 308 324 8.8E-5 T 18-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SHALO_1869 5320d03d0071fdb563b99cc77ae68fe5 328 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 293 308 8.8E-5 T 18-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SHALO_1778 02ad6b4ec29e557b0fd64236063825e2 442 SUPERFAMILY SSF52540 9 142 7.54E-25 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_1778 02ad6b4ec29e557b0fd64236063825e2 442 Pfam PF02689 Helicase 343 399 2.2E-5 T 18-10-2018 IPR003840 DNA helicase GO:0004386|GO:0005524 SHALO_1778 02ad6b4ec29e557b0fd64236063825e2 442 Pfam PF05970 PIF1-like helicase 13 179 1.8E-22 T 18-10-2018 IPR010285 DNA helicase Pif1-like GO:0000723|GO:0003678|GO:0006281 SHALO_1778 02ad6b4ec29e557b0fd64236063825e2 442 Gene3D G3DSA:3.40.50.300 2 153 3.1E-30 T 18-10-2018 SHALO_1778 02ad6b4ec29e557b0fd64236063825e2 442 SUPERFAMILY SSF52540 127 414 5.54E-30 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_1778 02ad6b4ec29e557b0fd64236063825e2 442 Gene3D G3DSA:3.40.50.300 287 395 9.4E-8 T 18-10-2018 SHALO_2818 81d51d29612afbd93d194ed036a0cbdf 491 PIRSF PIRSF002457 1 487 3.6E-132 T 18-10-2018 IPR030676 Citrate carrier CitT-related SHALO_2818 81d51d29612afbd93d194ed036a0cbdf 491 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 27 481 2.6E-130 T 18-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 SHALO_2818 81d51d29612afbd93d194ed036a0cbdf 491 Pfam PF00939 Sodium:sulfate symporter transmembrane region 10 484 2.9E-133 T 18-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 SHALO_2399 7ba25a535a067b85ca60f6a1769c1f96 620 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 438 583 7.6E-32 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_2399 7ba25a535a067b85ca60f6a1769c1f96 620 Pfam PF00672 HAMP domain 291 339 1.3E-6 T 18-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 SHALO_2399 7ba25a535a067b85ca60f6a1769c1f96 620 Gene3D G3DSA:1.10.287.950 289 620 9.2E-60 T 18-10-2018 SHALO_2399 7ba25a535a067b85ca60f6a1769c1f96 620 SUPERFAMILY SSF58104 311 619 6.41E-57 T 18-10-2018 SHALO_2399 7ba25a535a067b85ca60f6a1769c1f96 620 Gene3D G3DSA:3.30.450.20 50 262 3.0E-40 T 18-10-2018 SHALO_2399 7ba25a535a067b85ca60f6a1769c1f96 620 Gene3D G3DSA:3.30.450.20 62 171 3.0E-40 T 18-10-2018 SHALO_2399 7ba25a535a067b85ca60f6a1769c1f96 620 SUPERFAMILY SSF103190 114 180 3.4E-5 T 18-10-2018 IPR029151 Periplasmic sensor-like domain superfamily SHALO_2399 7ba25a535a067b85ca60f6a1769c1f96 620 SMART SM00304 289 343 1.8E-9 T 18-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 SHALO_2399 7ba25a535a067b85ca60f6a1769c1f96 620 SMART SM00283 344 619 5.9E-34 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_2399 7ba25a535a067b85ca60f6a1769c1f96 620 Pfam PF02743 Cache domain 35 248 1.3E-26 T 18-10-2018 IPR033479 Double Cache domain 1 SHALO_1071 9af7d002a855ce941e9564df59b8002e 626 Gene3D G3DSA:3.30.450.20 62 172 4.9E-45 T 18-10-2018 SHALO_1071 9af7d002a855ce941e9564df59b8002e 626 Gene3D G3DSA:3.30.450.20 49 268 4.9E-45 T 18-10-2018 SHALO_1071 9af7d002a855ce941e9564df59b8002e 626 SMART SM00304 295 349 1.2E-8 T 18-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 SHALO_1071 9af7d002a855ce941e9564df59b8002e 626 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 443 542 6.9E-32 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_1071 9af7d002a855ce941e9564df59b8002e 626 Gene3D G3DSA:1.10.287.950 295 626 2.9E-58 T 18-10-2018 SHALO_1071 9af7d002a855ce941e9564df59b8002e 626 SUPERFAMILY SSF58104 317 625 2.75E-57 T 18-10-2018 SHALO_1071 9af7d002a855ce941e9564df59b8002e 626 SUPERFAMILY SSF103190 108 179 2.15E-9 T 18-10-2018 IPR029151 Periplasmic sensor-like domain superfamily SHALO_1071 9af7d002a855ce941e9564df59b8002e 626 SMART SM00283 364 625 2.9E-40 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_1071 9af7d002a855ce941e9564df59b8002e 626 Pfam PF02743 Cache domain 37 254 1.7E-32 T 18-10-2018 IPR033479 Double Cache domain 1 SHALO_2407 d454bfe06ff22dd91953f7c745712146 187 Gene3D G3DSA:1.25.40.10 1 187 2.2E-5 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SHALO_2407 d454bfe06ff22dd91953f7c745712146 187 SUPERFAMILY SSF48452 6 179 2.5E-6 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SHALO_0277 9c02e8f79b3dddc3e58404e3dc75de6f 488 SUPERFAMILY SSF53067 5 127 1.54E-30 T 18-10-2018 SHALO_0277 9c02e8f79b3dddc3e58404e3dc75de6f 488 SUPERFAMILY SSF53067 131 297 8.87E-37 T 18-10-2018 SHALO_0277 9c02e8f79b3dddc3e58404e3dc75de6f 488 SUPERFAMILY SSF109604 312 467 1.32E-25 T 18-10-2018 SHALO_0277 9c02e8f79b3dddc3e58404e3dc75de6f 488 Gene3D G3DSA:3.30.420.40 1 110 9.4E-29 T 18-10-2018 SHALO_0277 9c02e8f79b3dddc3e58404e3dc75de6f 488 Gene3D G3DSA:1.10.3210.10 311 481 4.7E-21 T 18-10-2018 SHALO_0277 9c02e8f79b3dddc3e58404e3dc75de6f 488 Pfam PF02541 Ppx/GppA phosphatase family 19 298 6.6E-63 T 18-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 SHALO_0277 9c02e8f79b3dddc3e58404e3dc75de6f 488 Gene3D G3DSA:3.30.420.150 111 296 3.0E-43 T 18-10-2018 SHALO_0277 9c02e8f79b3dddc3e58404e3dc75de6f 488 PIRSF PIRSF001267 1 479 4.3E-84 T 18-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 SHALO_1695 be605fdfacb12c68bcc4e95134e8a96c 270 SUPERFAMILY SSF54534 122 225 3.79E-25 T 18-10-2018 SHALO_1695 be605fdfacb12c68bcc4e95134e8a96c 270 Gene3D G3DSA:1.10.8.1040 20 80 2.9E-13 T 18-10-2018 SHALO_1695 be605fdfacb12c68bcc4e95134e8a96c 270 Pfam PF13616 PPIC-type PPIASE domain 121 226 1.2E-19 T 18-10-2018 SHALO_1695 be605fdfacb12c68bcc4e95134e8a96c 270 Gene3D G3DSA:3.10.50.40 126 232 5.7E-36 T 18-10-2018 SHALO_1695 be605fdfacb12c68bcc4e95134e8a96c 270 SUPERFAMILY SSF109998 22 152 5.69E-17 T 18-10-2018 IPR027304 Trigger factor/SurA domain superfamily SHALO_1911 526c4faafdafad69cf30aa1d2e5d054b 133 SUPERFAMILY SSF55785 8 122 1.45E-21 T 18-10-2018 IPR035965 PAS domain superfamily SHALO_1911 526c4faafdafad69cf30aa1d2e5d054b 133 Pfam PF08447 PAS fold 26 115 2.8E-23 T 18-10-2018 IPR013655 PAS fold-3 GO:0005515 SHALO_1911 526c4faafdafad69cf30aa1d2e5d054b 133 SMART SM00086 78 121 4.5E-7 T 18-10-2018 IPR001610 PAC motif SHALO_1911 526c4faafdafad69cf30aa1d2e5d054b 133 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 3 124 1.4E-9 T 18-10-2018 IPR000014 PAS domain SHALO_1911 526c4faafdafad69cf30aa1d2e5d054b 133 Gene3D G3DSA:3.30.450.20 2 117 1.9E-28 T 18-10-2018 SHALO_0766 79e5ce26512364d15a24ceddd5170c4a 511 Gene3D G3DSA:3.40.50.880 3 197 3.4E-56 T 18-10-2018 IPR029062 Class I glutamine amidotransferase-like SHALO_0766 79e5ce26512364d15a24ceddd5170c4a 511 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 77 93 1.1E-5 T 18-10-2018 SHALO_0766 79e5ce26512364d15a24ceddd5170c4a 511 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 6 20 1.1E-5 T 18-10-2018 SHALO_0766 79e5ce26512364d15a24ceddd5170c4a 511 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 47 61 1.1E-5 T 18-10-2018 SHALO_0766 79e5ce26512364d15a24ceddd5170c4a 511 PRINTS PR00097 Anthranilate synthase component II signature 77 88 8.9E-6 T 18-10-2018 SHALO_0766 79e5ce26512364d15a24ceddd5170c4a 511 PRINTS PR00097 Anthranilate synthase component II signature 165 178 8.9E-6 T 18-10-2018 SHALO_0766 79e5ce26512364d15a24ceddd5170c4a 511 PRINTS PR00097 Anthranilate synthase component II signature 50 59 8.9E-6 T 18-10-2018 SHALO_0766 79e5ce26512364d15a24ceddd5170c4a 511 PRINTS PR00096 Glutamine amidotransferase superfamily signature 165 178 2.2E-7 T 18-10-2018 SHALO_0766 79e5ce26512364d15a24ceddd5170c4a 511 PRINTS PR00096 Glutamine amidotransferase superfamily signature 77 88 2.2E-7 T 18-10-2018 SHALO_0766 79e5ce26512364d15a24ceddd5170c4a 511 PRINTS PR00096 Glutamine amidotransferase superfamily signature 50 59 2.2E-7 T 18-10-2018 SHALO_0766 79e5ce26512364d15a24ceddd5170c4a 511 Gene3D G3DSA:3.40.50.620 198 391 3.6E-77 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_0766 79e5ce26512364d15a24ceddd5170c4a 511 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 6 193 1.6E-75 T 18-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 SHALO_0766 79e5ce26512364d15a24ceddd5170c4a 511 Pfam PF00958 GMP synthase C terminal domain 419 510 1.6E-42 T 18-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 SHALO_0766 79e5ce26512364d15a24ceddd5170c4a 511 SUPERFAMILY SSF54810 391 511 5.75E-48 T 18-10-2018 SHALO_0766 79e5ce26512364d15a24ceddd5170c4a 511 Pfam PF02540 NAD synthase 208 264 1.5E-6 T 18-10-2018 IPR022310 NAD/GMP synthase SHALO_0766 79e5ce26512364d15a24ceddd5170c4a 511 SUPERFAMILY SSF52402 182 432 3.97E-54 T 18-10-2018 SHALO_0766 79e5ce26512364d15a24ceddd5170c4a 511 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 3 511 53.153 T 18-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 SHALO_0766 79e5ce26512364d15a24ceddd5170c4a 511 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 201 511 1.6E-147 T 18-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 SHALO_0766 79e5ce26512364d15a24ceddd5170c4a 511 SUPERFAMILY SSF52317 6 225 5.53E-58 T 18-10-2018 IPR029062 Class I glutamine amidotransferase-like SHALO_0766 79e5ce26512364d15a24ceddd5170c4a 511 Pfam PF00117 Glutamine amidotransferase class-I 8 187 2.0E-42 T 18-10-2018 IPR017926 Glutamine amidotransferase SHALO_0766 79e5ce26512364d15a24ceddd5170c4a 511 Gene3D G3DSA:3.30.300.10 392 511 1.9E-50 T 18-10-2018 SHALO_1691 571aee797d966bada94ca9fa08c7a522 313 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 157 1.0E-30 T 18-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain SHALO_1691 571aee797d966bada94ca9fa08c7a522 313 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 186 306 2.3E-25 T 18-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain SHALO_1691 571aee797d966bada94ca9fa08c7a522 313 SUPERFAMILY SSF51735 1 191 4.6E-13 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_1691 571aee797d966bada94ca9fa08c7a522 313 SUPERFAMILY SSF48179 186 307 2.99E-23 T 18-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 SHALO_1691 571aee797d966bada94ca9fa08c7a522 313 Gene3D G3DSA:1.10.1040.10 186 312 1.7E-30 T 18-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SHALO_1691 571aee797d966bada94ca9fa08c7a522 313 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 308 5.3E-68 T 18-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 SHALO_1691 571aee797d966bada94ca9fa08c7a522 313 Gene3D G3DSA:3.40.50.720 1 185 1.5E-46 T 18-10-2018 SHALO_0354 a628e4f2248e6769bba4e98891166041 244 SUPERFAMILY SSF54862 48 222 2.16E-17 T 18-10-2018 SHALO_0354 a628e4f2248e6769bba4e98891166041 244 Gene3D G3DSA:3.30.70.20 137 241 1.7E-8 T 18-10-2018 SHALO_0354 a628e4f2248e6769bba4e98891166041 244 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 57 68 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_0354 a628e4f2248e6769bba4e98891166041 244 Gene3D G3DSA:3.30.70.20 51 128 1.9E-13 T 18-10-2018 SHALO_0354 a628e4f2248e6769bba4e98891166041 244 Pfam PF12838 4Fe-4S dicluster domain 57 111 1.1E-10 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_0354 a628e4f2248e6769bba4e98891166041 244 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 210 221 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_2205 3f370a10d7d069811f8aad05524533b5 275 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 56 267 7.7E-57 T 18-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 SHALO_2205 3f370a10d7d069811f8aad05524533b5 275 Gene3D G3DSA:3.40.50.150 92 275 3.5E-44 T 18-10-2018 SHALO_2205 3f370a10d7d069811f8aad05524533b5 275 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 5 274 27.947 T 18-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 SHALO_2205 3f370a10d7d069811f8aad05524533b5 275 PIRSF PIRSF000401 5 275 1.8E-63 T 18-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 SHALO_2205 3f370a10d7d069811f8aad05524533b5 275 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 49 274 2.6E-57 T 18-10-2018 SHALO_2205 3f370a10d7d069811f8aad05524533b5 275 SUPERFAMILY SSF53335 54 255 6.08E-30 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_0866 a3abc02233d81b01efd31336d5f3a774 227 Pfam PF05036 Sporulation related domain 153 218 5.9E-7 T 18-10-2018 IPR007730 Sporulation-like domain GO:0042834 SHALO_0866 a3abc02233d81b01efd31336d5f3a774 227 Gene3D G3DSA:3.30.70.1070 147 224 7.6E-6 T 18-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 SHALO_0866 a3abc02233d81b01efd31336d5f3a774 227 SUPERFAMILY SSF50685 32 127 9.42E-12 T 18-10-2018 IPR036908 RlpA-like domain superfamily SHALO_0866 a3abc02233d81b01efd31336d5f3a774 227 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 2 134 23.014 T 18-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 SHALO_0866 a3abc02233d81b01efd31336d5f3a774 227 Gene3D G3DSA:2.40.40.10 42 135 4.9E-36 T 18-10-2018 IPR036908 RlpA-like domain superfamily SHALO_0866 a3abc02233d81b01efd31336d5f3a774 227 SUPERFAMILY SSF110997 154 215 6.28E-6 T 18-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 SHALO_0866 a3abc02233d81b01efd31336d5f3a774 227 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 44 175 5.0E-51 T 18-10-2018 IPR012997 Rare lipoprotein A SHALO_0866 a3abc02233d81b01efd31336d5f3a774 227 Pfam PF03330 Lytic transglycolase 43 129 1.2E-24 T 18-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain SHALO_2492 0f0e3dc6ebc1b1ea95c3d6339ce9f2ca 328 PIRSF PIRSF015268 1 327 2.6E-126 T 18-10-2018 IPR011204 Virulence protein RhuM-like SHALO_2492 0f0e3dc6ebc1b1ea95c3d6339ce9f2ca 328 Pfam PF13310 Virulence protein RhuM family 62 308 1.2E-101 T 18-10-2018 IPR011204 Virulence protein RhuM-like SHALO_0751 5bbfb3a9a77d8f895dfe5b92e5b5753d 96 Gene3D G3DSA:1.10.20.60 1 94 8.0E-19 T 18-10-2018 SHALO_0751 5bbfb3a9a77d8f895dfe5b92e5b5753d 96 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 3 96 1.5E-20 T 18-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 SHALO_0751 5bbfb3a9a77d8f895dfe5b92e5b5753d 96 SUPERFAMILY SSF141000 3 94 1.7E-19 T 18-10-2018 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C GO:0006450 SHALO_0751 5bbfb3a9a77d8f895dfe5b92e5b5753d 96 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 19 91 3.0E-13 T 18-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 SHALO_0751 5bbfb3a9a77d8f895dfe5b92e5b5753d 96 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 96 17.135 T 18-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 SHALO_1784 95eccf38bedb13009d35f541bbb186b8 68 Pfam PF00403 Heavy-metal-associated domain 7 65 3.8E-17 T 18-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SHALO_1784 95eccf38bedb13009d35f541bbb186b8 68 ProSitePatterns PS01047 Heavy-metal-associated domain. 8 37 - T 18-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 SHALO_1784 95eccf38bedb13009d35f541bbb186b8 68 PRINTS PR00944 Copper ion binding protein signature 3 15 5.7E-5 T 18-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 SHALO_1784 95eccf38bedb13009d35f541bbb186b8 68 PRINTS PR00944 Copper ion binding protein signature 28 41 5.7E-5 T 18-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 SHALO_1784 95eccf38bedb13009d35f541bbb186b8 68 PRINTS PR00944 Copper ion binding protein signature 53 66 5.7E-5 T 18-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 SHALO_1784 95eccf38bedb13009d35f541bbb186b8 68 PRINTS PR00944 Copper ion binding protein signature 41 53 5.7E-5 T 18-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 SHALO_1784 95eccf38bedb13009d35f541bbb186b8 68 SUPERFAMILY SSF55008 1 67 3.8E-19 T 18-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 SHALO_1784 95eccf38bedb13009d35f541bbb186b8 68 Gene3D G3DSA:3.30.70.100 3 67 6.1E-19 T 18-10-2018 SHALO_0242 aec3901e7da0a06316ae68dc93220ec2 343 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 4 328 1.8E-65 T 18-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 SHALO_0242 aec3901e7da0a06316ae68dc93220ec2 343 Pfam PF02684 Lipid-A-disaccharide synthetase 4 308 7.8E-73 T 18-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 SHALO_0242 aec3901e7da0a06316ae68dc93220ec2 343 SUPERFAMILY SSF53756 15 324 5.65E-12 T 18-10-2018 SHALO_0217 5cd59382fe03244f0332a953946e2fe5 310 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 271 289 9.5E-56 T 18-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHALO_0217 5cd59382fe03244f0332a953946e2fe5 310 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 37 52 9.5E-56 T 18-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHALO_0217 5cd59382fe03244f0332a953946e2fe5 310 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 194 210 9.5E-56 T 18-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHALO_0217 5cd59382fe03244f0332a953946e2fe5 310 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 105 113 9.5E-56 T 18-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHALO_0217 5cd59382fe03244f0332a953946e2fe5 310 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 142 166 9.5E-56 T 18-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHALO_0217 5cd59382fe03244f0332a953946e2fe5 310 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 3 25 9.5E-56 T 18-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHALO_0217 5cd59382fe03244f0332a953946e2fe5 310 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 232 253 9.5E-56 T 18-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHALO_0217 5cd59382fe03244f0332a953946e2fe5 310 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 127 139 9.5E-56 T 18-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHALO_0217 5cd59382fe03244f0332a953946e2fe5 310 SUPERFAMILY SSF51905 1 307 3.78E-46 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SHALO_0217 5cd59382fe03244f0332a953946e2fe5 310 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 295 2.3E-47 T 18-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_0217 5cd59382fe03244f0332a953946e2fe5 310 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 3 307 8.7E-105 T 18-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 SHALO_0217 5cd59382fe03244f0332a953946e2fe5 310 Gene3D G3DSA:3.50.50.60 3 303 5.0E-114 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SHALO_0217 5cd59382fe03244f0332a953946e2fe5 310 Gene3D G3DSA:3.50.50.60 116 238 5.0E-114 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SHALO_0217 5cd59382fe03244f0332a953946e2fe5 310 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 104 122 5.6E-30 T 18-10-2018 SHALO_0217 5cd59382fe03244f0332a953946e2fe5 310 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 5.6E-30 T 18-10-2018 SHALO_0217 5cd59382fe03244f0332a953946e2fe5 310 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 146 164 5.6E-30 T 18-10-2018 SHALO_0217 5cd59382fe03244f0332a953946e2fe5 310 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 230 246 5.6E-30 T 18-10-2018 SHALO_0217 5cd59382fe03244f0332a953946e2fe5 310 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 5.6E-30 T 18-10-2018 SHALO_1046 b2b2e7fd8a2893a5f228dc2aa7125ed4 826 SUPERFAMILY SSF56059 22 454 1.59E-19 T 18-10-2018 SHALO_1046 b2b2e7fd8a2893a5f228dc2aa7125ed4 826 Pfam PF14403 Circularly permuted ATP-grasp type 2 80 454 7.2E-132 T 18-10-2018 IPR025841 Circularly permuted ATP-grasp type 2 SHALO_1046 b2b2e7fd8a2893a5f228dc2aa7125ed4 826 Gene3D G3DSA:3.30.1490.270 350 409 6.9E-6 T 18-10-2018 SHALO_1046 b2b2e7fd8a2893a5f228dc2aa7125ed4 826 Gene3D G3DSA:3.40.50.11290 218 313 2.4E-32 T 18-10-2018 SHALO_1046 b2b2e7fd8a2893a5f228dc2aa7125ed4 826 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 501 821 1.5E-45 T 18-10-2018 IPR007296 Domain of unknown function DUF403 SHALO_1660 2a0248a84f0cb0a291c460babc279e58 574 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 418 437 - T 18-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 SHALO_1660 2a0248a84f0cb0a291c460babc279e58 574 SUPERFAMILY SSF52518 4 176 8.08E-41 T 18-10-2018 IPR029061 Thiamin diphosphate-binding fold SHALO_1660 2a0248a84f0cb0a291c460babc279e58 574 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 171 1.3E-39 T 18-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 SHALO_1660 2a0248a84f0cb0a291c460babc279e58 574 Gene3D G3DSA:3.40.50.970 350 574 3.6E-63 T 18-10-2018 SHALO_1660 2a0248a84f0cb0a291c460babc279e58 574 SUPERFAMILY SSF52467 182 351 4.16E-40 T 18-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily SHALO_1660 2a0248a84f0cb0a291c460babc279e58 574 SUPERFAMILY SSF52518 359 554 2.47E-54 T 18-10-2018 IPR029061 Thiamin diphosphate-binding fold SHALO_1660 2a0248a84f0cb0a291c460babc279e58 574 Gene3D G3DSA:3.40.50.970 1 177 8.8E-56 T 18-10-2018 SHALO_1660 2a0248a84f0cb0a291c460babc279e58 574 Gene3D G3DSA:3.40.50.1220 180 333 5.3E-46 T 18-10-2018 SHALO_1660 2a0248a84f0cb0a291c460babc279e58 574 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 191 319 3.2E-28 T 18-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 SHALO_1660 2a0248a84f0cb0a291c460babc279e58 574 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 381 527 3.7E-38 T 18-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 SHALO_0586 40f3528515b00322b4e9ccefaa0cd1a0 273 Gene3D G3DSA:3.40.50.620 1 173 7.0E-64 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_0586 40f3528515b00322b4e9ccefaa0cd1a0 273 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 23 61 4.0E-7 T 18-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SHALO_0586 40f3528515b00322b4e9ccefaa0cd1a0 273 SUPERFAMILY SSF52374 1 273 3.25E-92 T 18-10-2018 SHALO_0586 40f3528515b00322b4e9ccefaa0cd1a0 273 Hamap MF_00158 Pantothenate synthetase [panC]. 2 273 35.517 T 18-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 SHALO_0586 40f3528515b00322b4e9ccefaa0cd1a0 273 Gene3D G3DSA:3.30.1300.10 174 273 1.2E-26 T 18-10-2018 SHALO_0586 40f3528515b00322b4e9ccefaa0cd1a0 273 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 273 1.2E-95 T 18-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 SHALO_0586 40f3528515b00322b4e9ccefaa0cd1a0 273 Pfam PF02569 Pantoate-beta-alanine ligase 2 271 1.8E-89 T 18-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 SHALO_0006 226e81b030e49c59eaec288371d8d73b 403 SUPERFAMILY SSF109604 9 164 6.59E-5 T 18-10-2018 SHALO_0006 226e81b030e49c59eaec288371d8d73b 403 Pfam PF13023 HD domain 194 371 4.5E-38 T 18-10-2018 IPR006674 HD domain SHALO_0006 226e81b030e49c59eaec288371d8d73b 403 SUPERFAMILY SSF109604 180 378 9.42E-31 T 18-10-2018 SHALO_0006 226e81b030e49c59eaec288371d8d73b 403 Gene3D G3DSA:1.10.3210.10 189 397 3.1E-30 T 18-10-2018 SHALO_0006 226e81b030e49c59eaec288371d8d73b 403 Gene3D G3DSA:1.10.3210.10 5 188 1.4E-16 T 18-10-2018 SHALO_2064 c1c67a2bf7995b39e85f523858c7aa5c 311 Gene3D G3DSA:3.40.50.1400 156 295 8.9E-87 T 18-10-2018 SHALO_2064 c1c67a2bf7995b39e85f523858c7aa5c 311 Hamap MF_00323 Ferrochelatase [hemH]. 1 311 30.542 T 18-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 SHALO_2064 c1c67a2bf7995b39e85f523858c7aa5c 311 SUPERFAMILY SSF53800 2 310 1.83E-82 T 18-10-2018 SHALO_2064 c1c67a2bf7995b39e85f523858c7aa5c 311 TIGRFAM TIGR00109 hemH: ferrochelatase 2 310 5.0E-89 T 18-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 SHALO_2064 c1c67a2bf7995b39e85f523858c7aa5c 311 Pfam PF00762 Ferrochelatase 2 310 1.6E-94 T 18-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 SHALO_2064 c1c67a2bf7995b39e85f523858c7aa5c 311 ProSitePatterns PS00534 Ferrochelatase signature. 183 201 - T 18-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 SHALO_2064 c1c67a2bf7995b39e85f523858c7aa5c 311 Gene3D G3DSA:3.40.50.1400 2 310 8.9E-87 T 18-10-2018 SHALO_2136 3384c4d927cef3d77d82141ab2422f5d 489 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 63 110 1.5E-5 T 18-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_2136 3384c4d927cef3d77d82141ab2422f5d 489 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 66 91 5.0E-7 T 18-10-2018 SHALO_2136 3384c4d927cef3d77d82141ab2422f5d 489 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 312 324 5.0E-7 T 18-10-2018 SHALO_2136 3384c4d927cef3d77d82141ab2422f5d 489 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 219 240 5.0E-7 T 18-10-2018 SHALO_2136 3384c4d927cef3d77d82141ab2422f5d 489 Pfam PF00361 Proton-conducting membrane transporter 126 417 4.5E-55 T 18-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0247 28feeae055b7d8524c25b493b5fbc875 776 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 242 309 2.8E-17 T 18-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 SHALO_0247 28feeae055b7d8524c25b493b5fbc875 776 SMART SM00448 655 770 1.4E-31 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_0247 28feeae055b7d8524c25b493b5fbc875 776 Gene3D G3DSA:3.30.565.10 310 496 2.4E-57 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_0247 28feeae055b7d8524c25b493b5fbc875 776 SMART SM01231 241 309 1.3E-17 T 18-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 SHALO_0247 28feeae055b7d8524c25b493b5fbc875 776 SUPERFAMILY SSF47384 242 310 1.18E-12 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SHALO_0247 28feeae055b7d8524c25b493b5fbc875 776 Gene3D G3DSA:2.40.50.180 520 583 2.1E-39 T 18-10-2018 SHALO_0247 28feeae055b7d8524c25b493b5fbc875 776 SUPERFAMILY SSF55874 311 495 7.6E-39 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_0247 28feeae055b7d8524c25b493b5fbc875 776 SMART SM00073 4 101 1.4E-30 T 18-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 SHALO_0247 28feeae055b7d8524c25b493b5fbc875 776 Pfam PF00072 Response regulator receiver domain 657 770 9.1E-23 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_0247 28feeae055b7d8524c25b493b5fbc875 776 Gene3D G3DSA:1.10.287.560 241 309 6.2E-21 T 18-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 SHALO_0247 28feeae055b7d8524c25b493b5fbc875 776 PRINTS PR00344 Bacterial sensor protein C-terminal signature 457 475 2.2E-11 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_0247 28feeae055b7d8524c25b493b5fbc875 776 PRINTS PR00344 Bacterial sensor protein C-terminal signature 481 494 2.2E-11 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_0247 28feeae055b7d8524c25b493b5fbc875 776 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 413 2.2E-11 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_0247 28feeae055b7d8524c25b493b5fbc875 776 Pfam PF01627 Hpt domain 6 105 5.4E-18 T 18-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 SHALO_0247 28feeae055b7d8524c25b493b5fbc875 776 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 357 496 7.4E-15 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_0247 28feeae055b7d8524c25b493b5fbc875 776 Gene3D G3DSA:2.30.30.40 497 624 2.1E-39 T 18-10-2018 SHALO_0247 28feeae055b7d8524c25b493b5fbc875 776 Gene3D G3DSA:1.20.120.160 1 138 2.4E-38 T 18-10-2018 IPR036641 HPT domain superfamily GO:0000160 SHALO_0247 28feeae055b7d8524c25b493b5fbc875 776 SMART SM00387 354 497 2.2E-21 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_0247 28feeae055b7d8524c25b493b5fbc875 776 SUPERFAMILY SSF47226 4 114 9.94E-32 T 18-10-2018 IPR036641 HPT domain superfamily GO:0000160 SHALO_0247 28feeae055b7d8524c25b493b5fbc875 776 Pfam PF01584 CheW-like domain 501 629 2.0E-25 T 18-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 SHALO_0247 28feeae055b7d8524c25b493b5fbc875 776 SUPERFAMILY SSF50341 496 628 4.05E-33 T 18-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 SHALO_0247 28feeae055b7d8524c25b493b5fbc875 776 SMART SM00260 489 628 8.5E-43 T 18-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 SHALO_0247 28feeae055b7d8524c25b493b5fbc875 776 Gene3D G3DSA:3.40.50.2300 641 775 6.1E-35 T 18-10-2018 SHALO_0247 28feeae055b7d8524c25b493b5fbc875 776 SUPERFAMILY SSF52172 654 774 1.28E-32 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_0917 3e374db8c09cc4840e0f4d70afc46f0d 137 Pfam PF02796 Helix-turn-helix domain of resolvase 93 135 7.0E-6 T 18-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 SHALO_0917 3e374db8c09cc4840e0f4d70afc46f0d 137 SUPERFAMILY SSF53041 17 90 1.31E-15 T 18-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 SHALO_0917 3e374db8c09cc4840e0f4d70afc46f0d 137 Gene3D G3DSA:1.10.10.60 93 137 8.1E-8 T 18-10-2018 SHALO_0917 3e374db8c09cc4840e0f4d70afc46f0d 137 Pfam PF00239 Resolvase, N terminal domain 18 90 4.9E-16 T 18-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 SHALO_0917 3e374db8c09cc4840e0f4d70afc46f0d 137 SMART SM00857 2 91 0.0074 T 18-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 SHALO_0917 3e374db8c09cc4840e0f4d70afc46f0d 137 SUPERFAMILY SSF46689 93 136 6.57E-10 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SHALO_0917 3e374db8c09cc4840e0f4d70afc46f0d 137 Gene3D G3DSA:3.40.50.1390 1 80 8.8E-16 T 18-10-2018 SHALO_2132 af99caeffa4002addcd293d4da3efeda 152 Pfam PF13613 Helix-turn-helix of DDE superfamily endonuclease 51 99 1.1E-12 T 18-10-2018 IPR027805 Transposase, Helix-turn-helix domain SHALO_0373 da838cc57efb98dd15ceff6109c96205 286 SUPERFAMILY SSF52096 29 238 3.07E-32 T 18-10-2018 IPR029045 ClpP/crotonase-like domain superfamily SHALO_0373 da838cc57efb98dd15ceff6109c96205 286 Pfam PF01343 Peptidase family S49 103 253 2.6E-47 T 18-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 SHALO_0373 da838cc57efb98dd15ceff6109c96205 286 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 46 250 1.7E-66 T 18-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 SHALO_0373 da838cc57efb98dd15ceff6109c96205 286 Gene3D G3DSA:3.90.226.10 48 245 1.8E-56 T 18-10-2018 SHALO_0373 da838cc57efb98dd15ceff6109c96205 286 Gene3D G3DSA:3.40.1750.20 142 208 1.8E-56 T 18-10-2018 SHALO_0227 df40a0585377cde8dafe1073fa54056d 154 PIRSF PIRSF000239 1 154 5.9E-30 T 18-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 SHALO_0227 df40a0585377cde8dafe1073fa54056d 154 SUPERFAMILY SSF52833 1 153 1.51E-55 T 18-10-2018 IPR036249 Thioredoxin-like superfamily SHALO_0227 df40a0585377cde8dafe1073fa54056d 154 Pfam PF00578 AhpC/TSA family 4 131 1.2E-41 T 18-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 SHALO_0227 df40a0585377cde8dafe1073fa54056d 154 Gene3D G3DSA:3.40.30.10 2 152 1.0E-50 T 18-10-2018 SHALO_1444 896632e999b4c6c7c336ea5fca6ef8ae 465 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 16 315 1.4E-118 T 18-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 SHALO_1444 896632e999b4c6c7c336ea5fca6ef8ae 465 SUPERFAMILY SSF52374 3 315 1.48E-80 T 18-10-2018 SHALO_1444 896632e999b4c6c7c336ea5fca6ef8ae 465 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 1 463 1.3E-157 T 18-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 SHALO_1444 896632e999b4c6c7c336ea5fca6ef8ae 465 Gene3D G3DSA:3.40.50.620 1 307 1.1E-116 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_1444 896632e999b4c6c7c336ea5fca6ef8ae 465 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 60 69 5.6E-27 T 18-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 SHALO_1444 896632e999b4c6c7c336ea5fca6ef8ae 465 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 189 207 5.6E-27 T 18-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 SHALO_1444 896632e999b4c6c7c336ea5fca6ef8ae 465 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 224 245 5.6E-27 T 18-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 SHALO_1444 896632e999b4c6c7c336ea5fca6ef8ae 465 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 24 35 5.6E-27 T 18-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 SHALO_1444 896632e999b4c6c7c336ea5fca6ef8ae 465 SUPERFAMILY SSF47323 318 463 1.31E-29 T 18-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_1444 896632e999b4c6c7c336ea5fca6ef8ae 465 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 1 464 34.165 T 18-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 SHALO_1444 896632e999b4c6c7c336ea5fca6ef8ae 465 Gene3D G3DSA:1.20.120.640 308 463 1.7E-31 T 18-10-2018 SHALO_0300 7d03f3284b6574823a2f18e29f42d0f6 389 SUPERFAMILY SSF55874 238 378 1.22E-29 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_0300 7d03f3284b6574823a2f18e29f42d0f6 389 Gene3D G3DSA:1.10.287.130 167 229 2.1E-5 T 18-10-2018 SHALO_0300 7d03f3284b6574823a2f18e29f42d0f6 389 SMART SM00387 276 382 9.8E-26 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_0300 7d03f3284b6574823a2f18e29f42d0f6 389 SMART SM00388 172 233 0.0046 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_0300 7d03f3284b6574823a2f18e29f42d0f6 389 SUPERFAMILY SSF47384 160 228 1.53E-6 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SHALO_0300 7d03f3284b6574823a2f18e29f42d0f6 389 Gene3D G3DSA:3.30.565.10 232 387 1.7E-31 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_0300 7d03f3284b6574823a2f18e29f42d0f6 389 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 279 380 3.1E-18 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_0300 7d03f3284b6574823a2f18e29f42d0f6 389 PRINTS PR00344 Bacterial sensor protein C-terminal signature 366 379 5.9E-8 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_0300 7d03f3284b6574823a2f18e29f42d0f6 389 PRINTS PR00344 Bacterial sensor protein C-terminal signature 329 339 5.9E-8 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_0300 7d03f3284b6574823a2f18e29f42d0f6 389 PRINTS PR00344 Bacterial sensor protein C-terminal signature 313 327 5.9E-8 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_0300 7d03f3284b6574823a2f18e29f42d0f6 389 PRINTS PR00344 Bacterial sensor protein C-terminal signature 342 360 5.9E-8 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_2520 1b1341cca29db071efd32875e659b379 74 SMART SM00899 1 73 1.3E-19 T 18-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 SHALO_2520 1b1341cca29db071efd32875e659b379 74 Gene3D G3DSA:2.30.30.90 1 74 6.7E-24 T 18-10-2018 IPR038157 Ferrous iron transporter, core domain SHALO_2520 1b1341cca29db071efd32875e659b379 74 Pfam PF04023 FeoA domain 1 72 1.6E-16 T 18-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 SHALO_2520 1b1341cca29db071efd32875e659b379 74 SUPERFAMILY SSF50037 4 73 3.66E-19 T 18-10-2018 IPR008988 Transcriptional repressor, C-terminal SHALO_0685 a27faa3ea4549335fc07f09669cae3b8 130 Pfam PF02472 Biopolymer transport protein ExbD/TolR 7 128 1.3E-24 T 18-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 SHALO_0685 a27faa3ea4549335fc07f09669cae3b8 130 Gene3D G3DSA:3.30.420.270 57 126 4.0E-11 T 18-10-2018 SHALO_2649 e3e69fa846feaf0a361d8f394fb8776d 357 Pfam PF01594 AI-2E family transporter 12 346 1.1E-34 T 18-10-2018 IPR002549 Transmembrane protein TqsA-like SHALO_0214 54ef0e5fed1b1c13bf94b8ffa7c5a965 423 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 8 114 3.8E-14 T 18-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 SHALO_0214 54ef0e5fed1b1c13bf94b8ffa7c5a965 423 Pfam PF00742 Homoserine dehydrogenase 130 308 1.6E-64 T 18-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 SHALO_0214 54ef0e5fed1b1c13bf94b8ffa7c5a965 423 SUPERFAMILY SSF55021 342 413 2.2E-11 T 18-10-2018 SHALO_0214 54ef0e5fed1b1c13bf94b8ffa7c5a965 423 Gene3D G3DSA:3.30.70.260 338 412 7.4E-153 T 18-10-2018 SHALO_0214 54ef0e5fed1b1c13bf94b8ffa7c5a965 423 SUPERFAMILY SSF51735 1 151 1.6E-30 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_0214 54ef0e5fed1b1c13bf94b8ffa7c5a965 423 Gene3D G3DSA:3.40.50.720 2 329 7.4E-153 T 18-10-2018 SHALO_0214 54ef0e5fed1b1c13bf94b8ffa7c5a965 423 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 176 198 - T 18-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 SHALO_0214 54ef0e5fed1b1c13bf94b8ffa7c5a965 423 Gene3D G3DSA:3.30.360.10 129 337 7.4E-153 T 18-10-2018 SHALO_0214 54ef0e5fed1b1c13bf94b8ffa7c5a965 423 Pfam PF01842 ACT domain 343 410 4.4E-12 T 18-10-2018 IPR002912 ACT domain SHALO_0214 54ef0e5fed1b1c13bf94b8ffa7c5a965 423 PIRSF PIRSF000098 1 423 6.4E-159 T 18-10-2018 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 SHALO_0214 54ef0e5fed1b1c13bf94b8ffa7c5a965 423 SUPERFAMILY SSF55347 130 295 6.02E-53 T 18-10-2018 SHALO_1929 fd5692209b1933603ddc57ee6402f2d4 277 Gene3D G3DSA:3.40.190.10 26 237 7.2E-23 T 18-10-2018 SHALO_1929 fd5692209b1933603ddc57ee6402f2d4 277 Gene3D G3DSA:3.40.190.10 109 209 7.2E-23 T 18-10-2018 SHALO_1929 fd5692209b1933603ddc57ee6402f2d4 277 SUPERFAMILY SSF53850 45 187 9.43E-10 T 18-10-2018 SHALO_1929 fd5692209b1933603ddc57ee6402f2d4 277 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 25 242 2.2E-31 T 18-10-2018 SHALO_1195 53af738256fdd7afc7165f5462fc5494 363 Gene3D G3DSA:1.10.3210.10 168 363 1.2E-70 T 18-10-2018 SHALO_1195 53af738256fdd7afc7165f5462fc5494 363 SMART SM00471 184 321 1.9E-9 T 18-10-2018 IPR003607 HD/PDEase domain SHALO_1195 53af738256fdd7afc7165f5462fc5494 363 Gene3D G3DSA:3.30.450.40 1 167 2.5E-46 T 18-10-2018 IPR029016 GAF-like domain superfamily SHALO_1195 53af738256fdd7afc7165f5462fc5494 363 SUPERFAMILY SSF55781 6 170 2.14E-42 T 18-10-2018 SHALO_1195 53af738256fdd7afc7165f5462fc5494 363 SMART SM00065 23 167 5.6E-25 T 18-10-2018 IPR003018 GAF domain GO:0005515 SHALO_1195 53af738256fdd7afc7165f5462fc5494 363 Pfam PF13492 GAF domain 23 159 2.2E-12 T 18-10-2018 IPR003018 GAF domain GO:0005515 SHALO_1195 53af738256fdd7afc7165f5462fc5494 363 SUPERFAMILY SSF109604 174 352 1.07E-38 T 18-10-2018 SHALO_1195 53af738256fdd7afc7165f5462fc5494 363 Pfam PF01966 HD domain 190 311 1.7E-18 T 18-10-2018 IPR006674 HD domain SHALO_2380 928a07f46380e9a85bbbcc0730030238 782 Gene3D G3DSA:3.40.50.300 362 505 4.3E-8 T 18-10-2018 SHALO_2380 928a07f46380e9a85bbbcc0730030238 782 SUPERFAMILY SSF52540 224 502 7.3E-21 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_2380 928a07f46380e9a85bbbcc0730030238 782 SUPERFAMILY SSF52980 543 723 1.02E-10 T 18-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 SHALO_2380 928a07f46380e9a85bbbcc0730030238 782 Pfam PF12705 PD-(D/E)XK nuclease superfamily 542 776 9.7E-32 T 18-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type SHALO_2092 b25d19ce18d3e0ec0078ee4f3a81d254 499 TIGRFAM TIGR01584 citF: citrate lyase, alpha subunit 32 497 2.1E-226 T 18-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 SHALO_2092 b25d19ce18d3e0ec0078ee4f3a81d254 499 PIRSF PIRSF009451 3 499 1.5E-241 T 18-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 SHALO_2092 b25d19ce18d3e0ec0078ee4f3a81d254 499 Pfam PF04223 Citrate lyase, alpha subunit (CitF) 34 497 6.6E-232 T 18-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 SHALO_2092 b25d19ce18d3e0ec0078ee4f3a81d254 499 Gene3D G3DSA:3.40.1080.10 2 229 7.5E-97 T 18-10-2018 SHALO_2092 b25d19ce18d3e0ec0078ee4f3a81d254 499 SUPERFAMILY SSF100950 233 497 4.57E-56 T 18-10-2018 IPR037171 NagB/RpiA transferase-like SHALO_2092 b25d19ce18d3e0ec0078ee4f3a81d254 499 SUPERFAMILY SSF100950 28 228 2.55E-72 T 18-10-2018 IPR037171 NagB/RpiA transferase-like SHALO_2092 b25d19ce18d3e0ec0078ee4f3a81d254 499 Gene3D G3DSA:3.40.1080.10 231 499 3.1E-118 T 18-10-2018 SHALO_0846 d2db7d402eacf27a5abc41d6fd0100e3 223 Gene3D G3DSA:3.40.50.300 2 223 2.0E-55 T 18-10-2018 SHALO_0846 d2db7d402eacf27a5abc41d6fd0100e3 223 Pfam PF00005 ABC transporter 22 168 4.4E-30 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_0846 d2db7d402eacf27a5abc41d6fd0100e3 223 SUPERFAMILY SSF52540 4 222 6.25E-61 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0846 d2db7d402eacf27a5abc41d6fd0100e3 223 SMART SM00382 30 217 1.2E-9 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_0846 d2db7d402eacf27a5abc41d6fd0100e3 223 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_2370 51500c230275cc84ec890f282703dc2a 439 Gene3D G3DSA:2.40.160.10 67 439 1.1E-19 T 18-10-2018 IPR023614 Porin domain superfamily SHALO_2370 51500c230275cc84ec890f282703dc2a 439 Pfam PF05538 Campylobacter major outer membrane protein 1 144 3.7E-10 T 18-10-2018 IPR008439 Campylobacter major outer membrane SHALO_0774 6495cfac8cf0bdfc31812c465c21b18c 244 SUPERFAMILY SSF53335 7 189 5.75E-19 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_0774 6495cfac8cf0bdfc31812c465c21b18c 244 Gene3D G3DSA:3.40.50.150 7 183 2.1E-6 T 18-10-2018 SHALO_2762 4dfa3bed851853830e315df558aa3318 212 Gene3D G3DSA:3.90.950.10 17 211 3.1E-59 T 18-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like SHALO_2762 4dfa3bed851853830e315df558aa3318 212 Hamap MF_01405 dITP/XTP pyrophosphatase. 17 210 43.045 T 18-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 SHALO_2762 4dfa3bed851853830e315df558aa3318 212 SUPERFAMILY SSF52972 13 209 1.88E-55 T 18-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like SHALO_2762 4dfa3bed851853830e315df558aa3318 212 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 19 202 7.5E-44 T 18-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 SHALO_2762 4dfa3bed851853830e315df558aa3318 212 Pfam PF01725 Ham1 family 19 202 5.7E-47 T 18-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 SHALO_1082 f96d414369dc288fcfa7e897b3e97776 215 SUPERFAMILY SSF52266 39 207 3.51E-40 T 18-10-2018 SHALO_1082 f96d414369dc288fcfa7e897b3e97776 215 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 43 195 2.5E-22 T 18-10-2018 IPR013830 SGNH hydrolase-type esterase domain SHALO_1082 f96d414369dc288fcfa7e897b3e97776 215 Gene3D G3DSA:3.40.50.1110 37 208 1.9E-47 T 18-10-2018 IPR036514 SGNH hydrolase superfamily SHALO_0996 38701913d605912e2fdeb4f487c18bab 144 Gene3D G3DSA:1.10.10.10 9 144 3.2E-29 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_0996 38701913d605912e2fdeb4f487c18bab 144 SUPERFAMILY SSF46785 10 143 1.41E-27 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SHALO_0996 38701913d605912e2fdeb4f487c18bab 144 SMART SM00347 29 129 6.0E-17 T 18-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SHALO_0996 38701913d605912e2fdeb4f487c18bab 144 Pfam PF01047 MarR family 43 93 3.3E-11 T 18-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SHALO_0996 38701913d605912e2fdeb4f487c18bab 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 85 6.8E-11 T 18-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SHALO_0996 38701913d605912e2fdeb4f487c18bab 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 119 139 6.8E-11 T 18-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SHALO_0996 38701913d605912e2fdeb4f487c18bab 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 53 69 6.8E-11 T 18-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SHALO_0996 38701913d605912e2fdeb4f487c18bab 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 105 6.8E-11 T 18-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SHALO_2524 12b55205b788f844138afadbac327c22 162 Pfam PF04542 Sigma-70 region 2 2 67 4.5E-11 T 18-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 SHALO_2524 12b55205b788f844138afadbac327c22 162 Gene3D G3DSA:1.10.10.10 67 156 3.2E-15 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_2524 12b55205b788f844138afadbac327c22 162 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 2 152 1.0E-26 T 18-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 SHALO_2524 12b55205b788f844138afadbac327c22 162 SUPERFAMILY SSF88659 79 153 7.66E-15 T 18-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like SHALO_2524 12b55205b788f844138afadbac327c22 162 Pfam PF08281 Sigma-70, region 4 100 150 1.7E-16 T 18-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHALO_2524 12b55205b788f844138afadbac327c22 162 Gene3D G3DSA:1.10.1740.10 1 64 2.1E-8 T 18-10-2018 SHALO_2524 12b55205b788f844138afadbac327c22 162 SUPERFAMILY SSF88946 2 85 4.32E-13 T 18-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 SHALO_2578 ad2faf664623853956b5fb0e21f48260 170 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 12 97 7.7E-13 T 18-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis SHALO_2578 ad2faf664623853956b5fb0e21f48260 170 SUPERFAMILY SSF53146 2 108 1.7E-17 T 18-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily SHALO_2578 ad2faf664623853956b5fb0e21f48260 170 Gene3D G3DSA:3.30.420.130 1 109 4.1E-17 T 18-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily SHALO_0683 69d2b256a506730f2b36b04cea6e3ccb 131 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 9 84 3.0E-22 T 18-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SHALO_0683 69d2b256a506730f2b36b04cea6e3ccb 131 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 3 124 2.6E-37 T 18-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SHALO_0683 69d2b256a506730f2b36b04cea6e3ccb 131 SUPERFAMILY SSF51344 2 84 1.12E-24 T 18-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SHALO_0683 69d2b256a506730f2b36b04cea6e3ccb 131 Gene3D G3DSA:2.60.15.10 1 129 1.0E-32 T 18-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SHALO_0683 69d2b256a506730f2b36b04cea6e3ccb 131 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 4 83 1.8E-27 T 18-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SHALO_0683 69d2b256a506730f2b36b04cea6e3ccb 131 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 2 124 18.479 T 18-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SHALO_2085 1783c95fca4b95d2183e4b07ced710a3 189 Pfam PF00117 Glutamine amidotransferase class-I 4 187 2.7E-53 T 18-10-2018 IPR017926 Glutamine amidotransferase SHALO_2085 1783c95fca4b95d2183e4b07ced710a3 189 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 6.3E-7 T 18-10-2018 SHALO_2085 1783c95fca4b95d2183e4b07ced710a3 189 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 6.3E-7 T 18-10-2018 SHALO_2085 1783c95fca4b95d2183e4b07ced710a3 189 Gene3D G3DSA:3.40.50.880 1 188 6.8E-65 T 18-10-2018 IPR029062 Class I glutamine amidotransferase-like SHALO_2085 1783c95fca4b95d2183e4b07ced710a3 189 PRINTS PR00097 Anthranilate synthase component II signature 74 85 1.6E-34 T 18-10-2018 SHALO_2085 1783c95fca4b95d2183e4b07ced710a3 189 PRINTS PR00097 Anthranilate synthase component II signature 2 16 1.6E-34 T 18-10-2018 SHALO_2085 1783c95fca4b95d2183e4b07ced710a3 189 PRINTS PR00097 Anthranilate synthase component II signature 99 107 1.6E-34 T 18-10-2018 SHALO_2085 1783c95fca4b95d2183e4b07ced710a3 189 PRINTS PR00097 Anthranilate synthase component II signature 120 132 1.6E-34 T 18-10-2018 SHALO_2085 1783c95fca4b95d2183e4b07ced710a3 189 PRINTS PR00097 Anthranilate synthase component II signature 166 179 1.6E-34 T 18-10-2018 SHALO_2085 1783c95fca4b95d2183e4b07ced710a3 189 PRINTS PR00097 Anthranilate synthase component II signature 47 56 1.6E-34 T 18-10-2018 SHALO_2085 1783c95fca4b95d2183e4b07ced710a3 189 PRINTS PR00096 Glutamine amidotransferase superfamily signature 166 179 1.7E-14 T 18-10-2018 SHALO_2085 1783c95fca4b95d2183e4b07ced710a3 189 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 1.7E-14 T 18-10-2018 SHALO_2085 1783c95fca4b95d2183e4b07ced710a3 189 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 1.7E-14 T 18-10-2018 SHALO_2085 1783c95fca4b95d2183e4b07ced710a3 189 SUPERFAMILY SSF52317 1 188 4.22E-58 T 18-10-2018 IPR029062 Class I glutamine amidotransferase-like SHALO_2085 1783c95fca4b95d2183e4b07ced710a3 189 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 188 2.1E-76 T 18-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 SHALO_2865 b056b5c5a572dfc2d9affc78302ef256 473 SMART SM00388 250 316 5.2E-14 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_2865 b056b5c5a572dfc2d9affc78302ef256 473 Gene3D G3DSA:1.10.287.130 245 317 2.7E-14 T 18-10-2018 SHALO_2865 b056b5c5a572dfc2d9affc78302ef256 473 Pfam PF00512 His Kinase A (phospho-acceptor) domain 252 314 2.1E-12 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_2865 b056b5c5a572dfc2d9affc78302ef256 473 Gene3D G3DSA:3.30.565.10 321 472 4.2E-37 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_2865 b056b5c5a572dfc2d9affc78302ef256 473 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 361 471 1.3E-23 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_2865 b056b5c5a572dfc2d9affc78302ef256 473 SMART SM00387 361 473 2.9E-35 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_2865 b056b5c5a572dfc2d9affc78302ef256 473 SUPERFAMILY SSF47384 242 315 7.26E-14 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SHALO_2865 b056b5c5a572dfc2d9affc78302ef256 473 SUPERFAMILY SSF55874 306 471 4.32E-40 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_2865 b056b5c5a572dfc2d9affc78302ef256 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 426 2.4E-12 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_2865 b056b5c5a572dfc2d9affc78302ef256 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 412 2.4E-12 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_2865 b056b5c5a572dfc2d9affc78302ef256 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 433 451 2.4E-12 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_2865 b056b5c5a572dfc2d9affc78302ef256 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 457 470 2.4E-12 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_2158 2fa51c45dada68f24e0922a93f884f96 204 Gene3D G3DSA:3.30.230.30 1 125 2.6E-34 T 18-10-2018 IPR036956 Impact, N-terminal domain superfamily SHALO_2158 2fa51c45dada68f24e0922a93f884f96 204 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 74 103 - T 18-10-2018 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site SHALO_2158 2fa51c45dada68f24e0922a93f884f96 204 SUPERFAMILY SSF54211 2 123 2.05E-33 T 18-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold SHALO_2158 2fa51c45dada68f24e0922a93f884f96 204 Pfam PF01205 Uncharacterized protein family UPF0029 15 119 1.1E-21 T 18-10-2018 IPR001498 Impact, N-terminal SHALO_0934 4fc9dc363dcee397c014bb4d26dbe092 314 SUPERFAMILY SSF103481 67 169 7.45E-16 T 18-10-2018 SHALO_0934 4fc9dc363dcee397c014bb4d26dbe092 314 SUPERFAMILY SSF103481 222 311 1.31E-11 T 18-10-2018 SHALO_0934 4fc9dc363dcee397c014bb4d26dbe092 314 Pfam PF00892 EamA-like transporter family 180 310 5.3E-18 T 18-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 SHALO_0934 4fc9dc363dcee397c014bb4d26dbe092 314 Pfam PF00892 EamA-like transporter family 37 167 9.0E-23 T 18-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 SHALO_2956 04c8d90251e21c222e3f10200caf05df 177 SUPERFAMILY SSF48403 19 136 9.66E-28 T 18-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily SHALO_2956 04c8d90251e21c222e3f10200caf05df 177 Gene3D G3DSA:1.25.40.20 4 149 3.6E-32 T 18-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily SHALO_2956 04c8d90251e21c222e3f10200caf05df 177 Pfam PF12796 Ankyrin repeats (3 copies) 23 109 8.5E-11 T 18-10-2018 IPR020683 Ankyrin repeat-containing domain SHALO_2956 04c8d90251e21c222e3f10200caf05df 177 SMART SM00248 47 76 0.018 T 18-10-2018 IPR002110 Ankyrin repeat GO:0005515 SHALO_2956 04c8d90251e21c222e3f10200caf05df 177 SMART SM00248 113 143 10.0 T 18-10-2018 IPR002110 Ankyrin repeat GO:0005515 SHALO_2956 04c8d90251e21c222e3f10200caf05df 177 SMART SM00248 80 109 12.0 T 18-10-2018 IPR002110 Ankyrin repeat GO:0005515 SHALO_1005 932a7e37efea7a7476bf3bd8f04f7d85 88 Hamap MF_00580 10 kDa chaperonin [groS]. 2 88 18.602 T 18-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SHALO_1005 932a7e37efea7a7476bf3bd8f04f7d85 88 PRINTS PR00297 10kDa chaperonin signature 25 46 1.1E-21 T 18-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SHALO_1005 932a7e37efea7a7476bf3bd8f04f7d85 88 PRINTS PR00297 10kDa chaperonin signature 75 88 1.1E-21 T 18-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SHALO_1005 932a7e37efea7a7476bf3bd8f04f7d85 88 PRINTS PR00297 10kDa chaperonin signature 54 66 1.1E-21 T 18-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SHALO_1005 932a7e37efea7a7476bf3bd8f04f7d85 88 PRINTS PR00297 10kDa chaperonin signature 3 18 1.1E-21 T 18-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SHALO_1005 932a7e37efea7a7476bf3bd8f04f7d85 88 SUPERFAMILY SSF50129 1 87 1.41E-24 T 18-10-2018 IPR011032 GroES-like superfamily SHALO_1005 932a7e37efea7a7476bf3bd8f04f7d85 88 Pfam PF00166 Chaperonin 10 Kd subunit 3 87 4.7E-27 T 18-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SHALO_1005 932a7e37efea7a7476bf3bd8f04f7d85 88 Gene3D G3DSA:2.30.33.40 1 88 8.0E-27 T 18-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 SHALO_1005 932a7e37efea7a7476bf3bd8f04f7d85 88 SMART SM00883 2 88 2.0E-39 T 18-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SHALO_1925 67c18b86365102910f67295a4013e2e2 596 Gene3D G3DSA:1.10.10.10 397 517 3.8E-24 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_1925 67c18b86365102910f67295a4013e2e2 596 Gene3D G3DSA:3.40.50.300 201 396 2.0E-52 T 18-10-2018 SHALO_1925 67c18b86365102910f67295a4013e2e2 596 Pfam PF00271 Helicase conserved C-terminal domain 219 322 3.2E-16 T 18-10-2018 IPR001650 Helicase, C-terminal SHALO_1925 67c18b86365102910f67295a4013e2e2 596 SMART SM00490 242 323 3.5E-26 T 18-10-2018 IPR001650 Helicase, C-terminal SHALO_1925 67c18b86365102910f67295a4013e2e2 596 Pfam PF00270 DEAD/DEAH box helicase 19 179 9.9E-20 T 18-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SHALO_1925 67c18b86365102910f67295a4013e2e2 596 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 7 457 2.9E-153 T 18-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 SHALO_1925 67c18b86365102910f67295a4013e2e2 596 SMART SM00341 522 596 1.1E-18 T 18-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 SHALO_1925 67c18b86365102910f67295a4013e2e2 596 Pfam PF16124 RecQ zinc-binding 335 395 5.0E-12 T 18-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain SHALO_1925 67c18b86365102910f67295a4013e2e2 596 Pfam PF00570 HRDC domain 526 591 1.1E-23 T 18-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 SHALO_1925 67c18b86365102910f67295a4013e2e2 596 Gene3D G3DSA:1.10.150.80 526 595 4.2E-26 T 18-10-2018 SHALO_1925 67c18b86365102910f67295a4013e2e2 596 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 6 593 1.6E-206 T 18-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 SHALO_1925 67c18b86365102910f67295a4013e2e2 596 SMART SM00956 404 505 1.1E-30 T 18-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 SHALO_1925 67c18b86365102910f67295a4013e2e2 596 Pfam PF09382 RQC domain 400 506 4.0E-27 T 18-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 SHALO_1925 67c18b86365102910f67295a4013e2e2 596 SUPERFAMILY SSF47819 527 593 2.24E-24 T 18-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 SHALO_1925 67c18b86365102910f67295a4013e2e2 596 SMART SM00487 13 207 3.4E-29 T 18-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain SHALO_1925 67c18b86365102910f67295a4013e2e2 596 SUPERFAMILY SSF52540 58 341 6.91E-53 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_1925 67c18b86365102910f67295a4013e2e2 596 Gene3D G3DSA:3.40.50.300 2 198 7.7E-74 T 18-10-2018 SHALO_1925 67c18b86365102910f67295a4013e2e2 596 SUPERFAMILY SSF46785 397 518 2.18E-27 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SHALO_0115 3731401059b4f82f247da9f088a1f7bf 247 Pfam PF01678 Diaminopimelate epimerase 133 227 1.4E-9 T 18-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 SHALO_0115 3731401059b4f82f247da9f088a1f7bf 247 Pfam PF01678 Diaminopimelate epimerase 4 106 9.0E-23 T 18-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 SHALO_0115 3731401059b4f82f247da9f088a1f7bf 247 Gene3D G3DSA:3.10.310.10 3 242 3.6E-60 T 18-10-2018 SHALO_0115 3731401059b4f82f247da9f088a1f7bf 247 Gene3D G3DSA:3.10.310.10 109 234 3.6E-60 T 18-10-2018 SHALO_0115 3731401059b4f82f247da9f088a1f7bf 247 SUPERFAMILY SSF54506 1 118 2.69E-30 T 18-10-2018 SHALO_0115 3731401059b4f82f247da9f088a1f7bf 247 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 2 245 6.3E-57 T 18-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 SHALO_0115 3731401059b4f82f247da9f088a1f7bf 247 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 60 74 - T 18-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 SHALO_0115 3731401059b4f82f247da9f088a1f7bf 247 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 1 247 24.797 T 18-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 SHALO_0115 3731401059b4f82f247da9f088a1f7bf 247 SUPERFAMILY SSF54506 124 246 6.28E-23 T 18-10-2018 SHALO_0678 7f562c7313916dea506c836d97d9317a 171 Hamap MF_01398 ATP synthase subunit b [atpF]. 20 159 9.309 T 18-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 SHALO_0678 7f562c7313916dea506c836d97d9317a 171 Pfam PF00430 ATP synthase B/B' CF(0) 31 138 2.8E-9 T 18-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 SHALO_2162 611b58580c9d354fc5501a9fdf2d65f5 288 ProSitePatterns PS00211 ABC transporters family signature. 128 142 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_2162 611b58580c9d354fc5501a9fdf2d65f5 288 SUPERFAMILY SSF52540 10 227 8.16E-63 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_2162 611b58580c9d354fc5501a9fdf2d65f5 288 Pfam PF00005 ABC transporter 20 155 7.4E-31 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_2162 611b58580c9d354fc5501a9fdf2d65f5 288 SMART SM00382 27 205 1.4E-14 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_2162 611b58580c9d354fc5501a9fdf2d65f5 288 Gene3D G3DSA:3.40.50.300 19 232 3.3E-61 T 18-10-2018 SHALO_2212 6416c75dea328cc29239076674fdd946 306 Pfam PF00953 Glycosyl transferase family 4 54 198 6.2E-27 T 18-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 SHALO_1852 0f50bb79b1aeaa70a9bb0b651ba74bc3 246 SUPERFAMILY SSF53335 7 197 2.03E-34 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_1852 0f50bb79b1aeaa70a9bb0b651ba74bc3 246 Pfam PF08241 Methyltransferase domain 44 136 8.7E-19 T 18-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 SHALO_1852 0f50bb79b1aeaa70a9bb0b651ba74bc3 246 Gene3D G3DSA:3.40.50.150 5 206 2.5E-35 T 18-10-2018 SHALO_2935 9b8ad4a94d68fd117a9e544c8a2f615a 347 Gene3D G3DSA:3.40.50.300 28 270 8.8E-82 T 18-10-2018 SHALO_2935 9b8ad4a94d68fd117a9e544c8a2f615a 347 SMART SM00382 59 231 1.9E-13 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_2935 9b8ad4a94d68fd117a9e544c8a2f615a 347 SUPERFAMILY SSF52540 6 270 2.97E-62 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_2935 9b8ad4a94d68fd117a9e544c8a2f615a 347 Pfam PF00154 recA bacterial DNA recombination protein 9 271 3.0E-136 T 18-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SHALO_2935 9b8ad4a94d68fd117a9e544c8a2f615a 347 Gene3D G3DSA:3.30.250.10 271 345 6.9E-27 T 18-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal SHALO_2935 9b8ad4a94d68fd117a9e544c8a2f615a 347 Hamap MF_00268 Protein RecA [recA]. 7 332 50.992 T 18-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SHALO_2935 9b8ad4a94d68fd117a9e544c8a2f615a 347 PRINTS PR00142 RecA protein signature 95 124 6.3E-84 T 18-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SHALO_2935 9b8ad4a94d68fd117a9e544c8a2f615a 347 PRINTS PR00142 RecA protein signature 129 158 6.3E-84 T 18-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SHALO_2935 9b8ad4a94d68fd117a9e544c8a2f615a 347 PRINTS PR00142 RecA protein signature 300 317 6.3E-84 T 18-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SHALO_2935 9b8ad4a94d68fd117a9e544c8a2f615a 347 PRINTS PR00142 RecA protein signature 246 275 6.3E-84 T 18-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SHALO_2935 9b8ad4a94d68fd117a9e544c8a2f615a 347 PRINTS PR00142 RecA protein signature 167 196 6.3E-84 T 18-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SHALO_2935 9b8ad4a94d68fd117a9e544c8a2f615a 347 PRINTS PR00142 RecA protein signature 213 241 6.3E-84 T 18-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SHALO_2935 9b8ad4a94d68fd117a9e544c8a2f615a 347 ProSitePatterns PS00321 recA signature. 216 224 - T 18-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 SHALO_2935 9b8ad4a94d68fd117a9e544c8a2f615a 347 SUPERFAMILY SSF54752 271 329 1.1E-20 T 18-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal SHALO_2935 9b8ad4a94d68fd117a9e544c8a2f615a 347 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 6 327 3.4E-169 T 18-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SHALO_2107 009d619bd1a7809dfc6993f483737556 426 PIRSF PIRSF005353 1 426 6.8E-145 T 18-10-2018 IPR026033 Purine permease PbuG-like SHALO_2107 009d619bd1a7809dfc6993f483737556 426 Pfam PF00860 Permease family 16 386 3.6E-36 T 18-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 SHALO_0648 4d272705a539b7461730d4949b95ddf0 920 SUPERFAMILY SSF47323 661 919 7.2E-46 T 18-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_0648 4d272705a539b7461730d4949b95ddf0 920 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 14 840 6.4E-266 T 18-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 SHALO_0648 4d272705a539b7461730d4949b95ddf0 920 Pfam PF08264 Anticodon-binding domain of tRNA 691 840 7.4E-17 T 18-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 SHALO_0648 4d272705a539b7461730d4949b95ddf0 920 SUPERFAMILY SSF52374 1 657 6.44E-129 T 18-10-2018 SHALO_0648 4d272705a539b7461730d4949b95ddf0 920 Gene3D G3DSA:3.40.50.620 33 638 3.9E-219 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_0648 4d272705a539b7461730d4949b95ddf0 920 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 60 71 - T 18-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_0648 4d272705a539b7461730d4949b95ddf0 920 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 53 64 8.8E-32 T 18-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 SHALO_0648 4d272705a539b7461730d4949b95ddf0 920 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 401 416 8.8E-32 T 18-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 SHALO_0648 4d272705a539b7461730d4949b95ddf0 920 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 534 547 8.8E-32 T 18-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 SHALO_0648 4d272705a539b7461730d4949b95ddf0 920 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 236 259 8.8E-32 T 18-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 SHALO_0648 4d272705a539b7461730d4949b95ddf0 920 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 570 579 8.8E-32 T 18-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 SHALO_0648 4d272705a539b7461730d4949b95ddf0 920 SUPERFAMILY SSF50677 207 403 5.23E-41 T 18-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 SHALO_0648 4d272705a539b7461730d4949b95ddf0 920 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 1 919 18.905 T 18-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 SHALO_0648 4d272705a539b7461730d4949b95ddf0 920 Gene3D G3DSA:3.90.740.10 198 408 3.9E-219 T 18-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 SHALO_0648 4d272705a539b7461730d4949b95ddf0 920 Gene3D G3DSA:1.10.730.20 649 920 8.6E-62 T 18-10-2018 SHALO_0648 4d272705a539b7461730d4949b95ddf0 920 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 27 650 1.2E-209 T 18-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_1306 365eb7177ecbe82ca59bdf35bcc5b5ef 372 SUPERFAMILY SSF53383 25 369 2.86E-87 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase SHALO_1306 365eb7177ecbe82ca59bdf35bcc5b5ef 372 Gene3D G3DSA:3.40.640.10 2 372 7.2E-105 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 SHALO_1306 365eb7177ecbe82ca59bdf35bcc5b5ef 372 Pfam PF00155 Aminotransferase class I and II 25 364 1.1E-45 T 18-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SHALO_0902 a35f668c9914ab7e38ac4a1a08162a19 537 SMART SM00283 276 537 2.9E-39 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_0902 a35f668c9914ab7e38ac4a1a08162a19 537 Pfam PF12729 Four helix bundle sensory module for signal transduction 3 173 1.2E-16 T 18-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain SHALO_0902 a35f668c9914ab7e38ac4a1a08162a19 537 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 355 453 3.5E-32 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_0902 a35f668c9914ab7e38ac4a1a08162a19 537 SUPERFAMILY SSF58104 229 537 3.58E-58 T 18-10-2018 SHALO_0902 a35f668c9914ab7e38ac4a1a08162a19 537 Gene3D G3DSA:1.10.287.950 208 537 2.0E-59 T 18-10-2018 SHALO_0511 86b42b22d792ea93569cad94f1d3f745 159 Gene3D G3DSA:1.10.10.1590 4 75 6.0E-22 T 18-10-2018 SHALO_0511 86b42b22d792ea93569cad94f1d3f745 159 Gene3D G3DSA:3.40.30.10 76 159 6.1E-29 T 18-10-2018 SHALO_0511 86b42b22d792ea93569cad94f1d3f745 159 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 115 133 - T 18-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0511 86b42b22d792ea93569cad94f1d3f745 159 PIRSF PIRSF000216 1 159 9.2E-60 T 18-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0511 86b42b22d792ea93569cad94f1d3f745 159 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 16 157 1.9E-51 T 18-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0511 86b42b22d792ea93569cad94f1d3f745 159 SUPERFAMILY SSF52833 6 157 9.28E-51 T 18-10-2018 IPR036249 Thioredoxin-like superfamily SHALO_0511 86b42b22d792ea93569cad94f1d3f745 159 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 16 157 1.8E-54 T 18-10-2018 SHALO_2318 5d2e3f1dd9299c14cfcf7094df76ee44 185 Gene3D G3DSA:3.40.630.30 1 184 1.1E-10 T 18-10-2018 SHALO_2318 5d2e3f1dd9299c14cfcf7094df76ee44 185 SUPERFAMILY SSF55729 1 169 3.06E-12 T 18-10-2018 IPR016181 Acyl-CoA N-acyltransferase SHALO_1040 9fea55846b25b96695c67bcfe6bada35 721 Pfam PF00005 ABC transporter 506 655 1.5E-32 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_1040 9fea55846b25b96695c67bcfe6bada35 721 Gene3D G3DSA:1.20.1560.10 161 473 1.3E-55 T 18-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 SHALO_1040 9fea55846b25b96695c67bcfe6bada35 721 Gene3D G3DSA:3.90.70.10 8 145 1.9E-34 T 18-10-2018 SHALO_1040 9fea55846b25b96695c67bcfe6bada35 721 SUPERFAMILY SSF90123 162 472 2.88E-50 T 18-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 SHALO_1040 9fea55846b25b96695c67bcfe6bada35 721 Gene3D G3DSA:3.40.50.300 479 719 2.0E-79 T 18-10-2018 SHALO_1040 9fea55846b25b96695c67bcfe6bada35 721 Pfam PF00664 ABC transporter transmembrane region 177 437 1.9E-20 T 18-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 SHALO_1040 9fea55846b25b96695c67bcfe6bada35 721 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 12 716 1.2E-277 T 18-10-2018 IPR017750 ATPase, type I secretion system SHALO_1040 9fea55846b25b96695c67bcfe6bada35 721 SUPERFAMILY SSF52540 481 713 9.49E-73 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_1040 9fea55846b25b96695c67bcfe6bada35 721 SMART SM00382 515 701 2.5E-14 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_2320 89ecd60b538ce692ed42c0d95a13fa5c 337 Gene3D G3DSA:3.30.1330.60 206 337 4.0E-40 T 18-10-2018 IPR036737 OmpA-like domain superfamily SHALO_2320 89ecd60b538ce692ed42c0d95a13fa5c 337 PRINTS PR01021 OMPA domain signature 235 257 7.6E-17 T 18-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SHALO_2320 89ecd60b538ce692ed42c0d95a13fa5c 337 PRINTS PR01021 OMPA domain signature 265 280 7.6E-17 T 18-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SHALO_2320 89ecd60b538ce692ed42c0d95a13fa5c 337 PRINTS PR01021 OMPA domain signature 280 296 7.6E-17 T 18-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SHALO_2320 89ecd60b538ce692ed42c0d95a13fa5c 337 Pfam PF13505 Outer membrane protein beta-barrel domain 8 161 1.5E-7 T 18-10-2018 IPR027385 Outer membrane protein beta-barrel SHALO_2320 89ecd60b538ce692ed42c0d95a13fa5c 337 Pfam PF00691 OmpA family 234 329 2.1E-25 T 18-10-2018 IPR006665 OmpA-like domain SHALO_2320 89ecd60b538ce692ed42c0d95a13fa5c 337 Gene3D G3DSA:2.40.160.20 16 171 7.5E-21 T 18-10-2018 SHALO_2320 89ecd60b538ce692ed42c0d95a13fa5c 337 SUPERFAMILY SSF103647 194 236 6.15E-10 T 18-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 SHALO_2320 89ecd60b538ce692ed42c0d95a13fa5c 337 SUPERFAMILY SSF56925 24 171 6.54E-16 T 18-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel SHALO_2320 89ecd60b538ce692ed42c0d95a13fa5c 337 SUPERFAMILY SSF103088 223 335 1.16E-36 T 18-10-2018 IPR036737 OmpA-like domain superfamily SHALO_2939 a444040194838180b5155df126f418b7 333 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 2 311 3.5E-108 T 18-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 SHALO_2939 a444040194838180b5155df126f418b7 333 SUPERFAMILY SSF53067 97 307 9.93E-30 T 18-10-2018 SHALO_2939 a444040194838180b5155df126f418b7 333 Pfam PF00814 Glycoprotease family 24 304 6.9E-78 T 18-10-2018 IPR000905 Gcp-like domain SHALO_2939 a444040194838180b5155df126f418b7 333 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 332 54.176 T 18-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 SHALO_2939 a444040194838180b5155df126f418b7 333 Gene3D G3DSA:3.30.420.40 124 291 4.9E-101 T 18-10-2018 SHALO_2939 a444040194838180b5155df126f418b7 333 SUPERFAMILY SSF53067 1 117 9.71E-20 T 18-10-2018 SHALO_2939 a444040194838180b5155df126f418b7 333 Gene3D G3DSA:3.30.420.40 2 312 4.9E-101 T 18-10-2018 SHALO_2939 a444040194838180b5155df126f418b7 333 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 72 92 1.1E-37 T 18-10-2018 IPR017861 Kae1/TsaD family SHALO_2939 a444040194838180b5155df126f418b7 333 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 149 170 1.1E-37 T 18-10-2018 IPR017861 Kae1/TsaD family SHALO_2939 a444040194838180b5155df126f418b7 333 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 93 112 1.1E-37 T 18-10-2018 IPR017861 Kae1/TsaD family SHALO_2939 a444040194838180b5155df126f418b7 333 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 3 16 1.1E-37 T 18-10-2018 IPR017861 Kae1/TsaD family SHALO_2939 a444040194838180b5155df126f418b7 333 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 126 138 1.1E-37 T 18-10-2018 IPR017861 Kae1/TsaD family SHALO_2939 a444040194838180b5155df126f418b7 333 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 261 270 1.1E-37 T 18-10-2018 IPR017861 Kae1/TsaD family SHALO_2939 a444040194838180b5155df126f418b7 333 ProSitePatterns PS01016 Glycoprotease family signature. 92 112 - T 18-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 SHALO_2939 a444040194838180b5155df126f418b7 333 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 3 304 1.3E-101 T 18-10-2018 IPR017861 Kae1/TsaD family SHALO_2917 19ecbd8da887e7837d3e189db5cff865 385 SUPERFAMILY SSF53756 3 373 2.09E-48 T 18-10-2018 SHALO_2917 19ecbd8da887e7837d3e189db5cff865 385 Gene3D G3DSA:3.40.50.2000 183 358 3.2E-39 T 18-10-2018 SHALO_2917 19ecbd8da887e7837d3e189db5cff865 385 Gene3D G3DSA:3.40.50.2000 14 363 3.2E-39 T 18-10-2018 SHALO_2917 19ecbd8da887e7837d3e189db5cff865 385 Pfam PF00534 Glycosyl transferases group 1 196 353 3.4E-22 T 18-10-2018 IPR001296 Glycosyl transferase, family 1 SHALO_0052 7c11c6bd58d1940e64f43656810fcf42 687 Gene3D G3DSA:2.20.25.90 5 58 8.0E-16 T 18-10-2018 SHALO_0052 7c11c6bd58d1940e64f43656810fcf42 687 Pfam PF00384 Molybdopterin oxidoreductase 61 485 1.1E-43 T 18-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0052 7c11c6bd58d1940e64f43656810fcf42 687 Gene3D G3DSA:3.40.50.740 90 533 1.0E-113 T 18-10-2018 SHALO_0052 7c11c6bd58d1940e64f43656810fcf42 687 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 6 57 1.5E-14 T 18-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0052 7c11c6bd58d1940e64f43656810fcf42 687 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 9 27 - T 18-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 SHALO_0052 7c11c6bd58d1940e64f43656810fcf42 687 SUPERFAMILY SSF50692 577 686 1.49E-17 T 18-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily SHALO_0052 7c11c6bd58d1940e64f43656810fcf42 687 Gene3D G3DSA:3.40.228.10 159 361 1.0E-113 T 18-10-2018 SHALO_0052 7c11c6bd58d1940e64f43656810fcf42 687 SMART SM00926 4 58 2.3E-14 T 18-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0052 7c11c6bd58d1940e64f43656810fcf42 687 SUPERFAMILY SSF53706 5 559 8.51E-133 T 18-10-2018 SHALO_0052 7c11c6bd58d1940e64f43656810fcf42 687 Gene3D G3DSA:2.40.40.20 572 687 7.1E-17 T 18-10-2018 SHALO_0052 7c11c6bd58d1940e64f43656810fcf42 687 Pfam PF01568 Molydopterin dinucleotide binding domain 577 680 5.8E-13 T 18-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 SHALO_3001 30e458cfdd54ed0b1090344aece18674 779 Pfam PF01568 Molydopterin dinucleotide binding domain 657 772 2.0E-17 T 18-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 SHALO_3001 30e458cfdd54ed0b1090344aece18674 779 Gene3D G3DSA:2.20.25.90 39 103 2.6E-20 T 18-10-2018 SHALO_3001 30e458cfdd54ed0b1090344aece18674 779 SUPERFAMILY SSF53706 44 644 1.03E-136 T 18-10-2018 SHALO_3001 30e458cfdd54ed0b1090344aece18674 779 Gene3D G3DSA:2.40.40.20 641 779 1.5E-37 T 18-10-2018 SHALO_3001 30e458cfdd54ed0b1090344aece18674 779 Gene3D G3DSA:3.40.228.10 187 379 5.5E-116 T 18-10-2018 SHALO_3001 30e458cfdd54ed0b1090344aece18674 779 SUPERFAMILY SSF50692 618 779 4.75E-28 T 18-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily SHALO_3001 30e458cfdd54ed0b1090344aece18674 779 Pfam PF00384 Molybdopterin oxidoreductase 102 519 3.6E-65 T 18-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_3001 30e458cfdd54ed0b1090344aece18674 779 Gene3D G3DSA:3.40.50.740 104 522 5.5E-116 T 18-10-2018 SHALO_3001 30e458cfdd54ed0b1090344aece18674 779 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 46 98 3.3E-8 T 18-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_3001 30e458cfdd54ed0b1090344aece18674 779 SMART SM00926 45 99 1.7E-9 T 18-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_1126 aa45221100d962f27f2ea771401ff54f 269 Pfam PF13614 AAA domain 4 171 7.7E-23 T 18-10-2018 IPR025669 AAA domain SHALO_1126 aa45221100d962f27f2ea771401ff54f 269 Gene3D G3DSA:3.40.50.300 1 257 1.8E-66 T 18-10-2018 SHALO_1126 aa45221100d962f27f2ea771401ff54f 269 SUPERFAMILY SSF52540 1 249 8.14E-52 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_1126 aa45221100d962f27f2ea771401ff54f 269 PIRSF PIRSF003092 1 269 7.2E-85 T 18-10-2018 IPR025501 ATP binding protein MinD SHALO_1126 aa45221100d962f27f2ea771401ff54f 269 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 3 268 6.3E-117 T 18-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 SHALO_0388 5eb4a869a57044a5f0dbcc2a889eb13e 377 TIGRFAM TIGR02379 ECA_wecE: TDP-4-keto-6-deoxy-D-glucose transaminase 1 373 3.2E-195 T 18-10-2018 IPR012749 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE-like MetaCyc: PWY-7315 SHALO_0388 5eb4a869a57044a5f0dbcc2a889eb13e 377 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 13 371 4.5E-84 T 18-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SHALO_0388 5eb4a869a57044a5f0dbcc2a889eb13e 377 Gene3D G3DSA:3.90.1150.10 250 374 1.6E-24 T 18-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 SHALO_0388 5eb4a869a57044a5f0dbcc2a889eb13e 377 Gene3D G3DSA:3.40.640.10 1 249 5.2E-78 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 SHALO_0388 5eb4a869a57044a5f0dbcc2a889eb13e 377 SUPERFAMILY SSF53383 2 374 3.54E-99 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase SHALO_0388 5eb4a869a57044a5f0dbcc2a889eb13e 377 PIRSF PIRSF000390 1 376 3.4E-105 T 18-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SHALO_1399 e9793ce3e4f8e236a686fbdf46a45d78 447 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 37 62 - T 18-10-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 SHALO_1399 e9793ce3e4f8e236a686fbdf46a45d78 447 Pfam PF00374 Nickel-dependent hydrogenase 140 445 3.1E-23 T 18-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 SHALO_1399 e9793ce3e4f8e236a686fbdf46a45d78 447 Pfam PF00374 Nickel-dependent hydrogenase 37 112 3.4E-15 T 18-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 SHALO_1399 e9793ce3e4f8e236a686fbdf46a45d78 447 SUPERFAMILY SSF56762 1 446 2.88E-77 T 18-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_1399 e9793ce3e4f8e236a686fbdf46a45d78 447 Gene3D G3DSA:1.10.645.10 1 447 4.9E-89 T 18-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_2581 f00d7b8964e5efc52c0ad3ea52fc34bf 394 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 95 120 - T 18-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 SHALO_2581 f00d7b8964e5efc52c0ad3ea52fc34bf 394 Gene3D G3DSA:3.20.20.120 113 375 1.2E-137 T 18-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily SHALO_2581 f00d7b8964e5efc52c0ad3ea52fc34bf 394 Gene3D G3DSA:3.30.390.10 22 385 1.2E-137 T 18-10-2018 IPR029017 Enolase-like, N-terminal SHALO_2581 f00d7b8964e5efc52c0ad3ea52fc34bf 394 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 25 120 2.2E-16 T 18-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain SHALO_2581 f00d7b8964e5efc52c0ad3ea52fc34bf 394 SMART SM00922 148 263 5.3E-11 T 18-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal SHALO_2581 f00d7b8964e5efc52c0ad3ea52fc34bf 394 Pfam PF13378 Enolase C-terminal domain-like 154 382 5.9E-50 T 18-10-2018 IPR029065 Enolase C-terminal domain-like SHALO_2581 f00d7b8964e5efc52c0ad3ea52fc34bf 394 SUPERFAMILY SSF54826 3 125 1.69E-26 T 18-10-2018 SHALO_2581 f00d7b8964e5efc52c0ad3ea52fc34bf 394 SUPERFAMILY SSF51604 108 386 1.44E-72 T 18-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily SHALO_1587 9dae4b4b882b3a5a1571d397b8b5168e 163 SUPERFAMILY SSF54197 1 153 1.86E-35 T 18-10-2018 IPR036265 HIT-like superfamily SHALO_1587 9dae4b4b882b3a5a1571d397b8b5168e 163 Pfam PF01230 HIT domain 33 125 8.6E-15 T 18-10-2018 IPR001310 Histidine triad (HIT) protein SHALO_1587 9dae4b4b882b3a5a1571d397b8b5168e 163 Gene3D G3DSA:3.30.428.10 1 159 5.7E-45 T 18-10-2018 IPR036265 HIT-like superfamily SHALO_1931 4212d4b4bb62f556a1057a08e8ee26b4 406 Gene3D G3DSA:3.30.565.10 267 406 8.2E-19 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_1931 4212d4b4bb62f556a1057a08e8ee26b4 406 SMART SM00387 305 406 8.4E-12 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_1931 4212d4b4bb62f556a1057a08e8ee26b4 406 SMART SM00388 205 263 2.8E-9 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_1931 4212d4b4bb62f556a1057a08e8ee26b4 406 SUPERFAMILY SSF158472 154 201 4.45E-6 T 18-10-2018 SHALO_1931 4212d4b4bb62f556a1057a08e8ee26b4 406 SUPERFAMILY SSF47384 189 262 5.3E-10 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SHALO_1931 4212d4b4bb62f556a1057a08e8ee26b4 406 SMART SM00304 152 204 1.1E-4 T 18-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 SHALO_1931 4212d4b4bb62f556a1057a08e8ee26b4 406 SUPERFAMILY SSF55874 253 399 3.41E-21 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_1931 4212d4b4bb62f556a1057a08e8ee26b4 406 Gene3D G3DSA:1.10.287.130 157 264 1.7E-20 T 18-10-2018 SHALO_1931 4212d4b4bb62f556a1057a08e8ee26b4 406 Pfam PF00512 His Kinase A (phospho-acceptor) domain 205 262 2.8E-8 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_1931 4212d4b4bb62f556a1057a08e8ee26b4 406 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 308 395 1.4E-11 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_1931 4212d4b4bb62f556a1057a08e8ee26b4 406 Pfam PF00672 HAMP domain 157 200 2.3E-6 T 18-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 SHALO_0397 afb831b7856d216f9fea59f48521ef8c 845 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 6 811 24.377 T 18-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SHALO_0397 afb831b7856d216f9fea59f48521ef8c 845 Gene3D G3DSA:3.30.1360.40 239 334 3.1E-206 T 18-10-2018 SHALO_0397 afb831b7856d216f9fea59f48521ef8c 845 Gene3D G3DSA:1.10.268.10 371 467 3.1E-206 T 18-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 SHALO_0397 afb831b7856d216f9fea59f48521ef8c 845 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 11 810 0.0 T 18-10-2018 SHALO_0397 afb831b7856d216f9fea59f48521ef8c 845 Gene3D G3DSA:3.90.199.10 36 488 3.1E-206 T 18-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 SHALO_0397 afb831b7856d216f9fea59f48521ef8c 845 SUPERFAMILY SSF101904 500 824 6.67E-105 T 18-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal SHALO_0397 afb831b7856d216f9fea59f48521ef8c 845 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 35 473 2.6E-157 T 18-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 SHALO_0397 afb831b7856d216f9fea59f48521ef8c 845 SMART SM00434 14 466 3.0E-282 T 18-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 SHALO_0397 afb831b7856d216f9fea59f48521ef8c 845 SUPERFAMILY SSF56719 34 489 7.59E-176 T 18-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 SHALO_0397 afb831b7856d216f9fea59f48521ef8c 845 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 764 809 3.3E-8 T 18-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SHALO_0397 afb831b7856d216f9fea59f48521ef8c 845 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 506 550 5.8E-12 T 18-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SHALO_0397 afb831b7856d216f9fea59f48521ef8c 845 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 555 604 1.4E-8 T 18-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SHALO_0397 afb831b7856d216f9fea59f48521ef8c 845 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 612 655 4.3E-12 T 18-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SHALO_0397 afb831b7856d216f9fea59f48521ef8c 845 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 712 760 2.0E-15 T 18-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SHALO_0397 afb831b7856d216f9fea59f48521ef8c 845 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 661 707 2.4E-13 T 18-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SHALO_0397 afb831b7856d216f9fea59f48521ef8c 845 Gene3D G3DSA:2.120.10.90 497 808 7.0E-119 T 18-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal SHALO_2074 f47fc040491b6801c4c0bf43f62fd993 130 SUPERFAMILY SSF52833 27 124 2.11E-17 T 18-10-2018 IPR036249 Thioredoxin-like superfamily SHALO_2074 f47fc040491b6801c4c0bf43f62fd993 130 Gene3D G3DSA:3.40.30.10 19 130 1.7E-16 T 18-10-2018 SHALO_2074 f47fc040491b6801c4c0bf43f62fd993 130 Pfam PF13098 Thioredoxin-like domain 32 121 1.5E-8 T 18-10-2018 IPR012336 Thioredoxin-like fold SHALO_0775 a55cdeb6d4af100d68d0547bc5e57a2b 294 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 3 57 2.5E-6 T 18-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 SHALO_0775 a55cdeb6d4af100d68d0547bc5e57a2b 294 Gene3D G3DSA:1.10.443.10 107 284 7.7E-36 T 18-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 SHALO_0775 a55cdeb6d4af100d68d0547bc5e57a2b 294 SUPERFAMILY SSF56349 2 279 1.09E-54 T 18-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SHALO_0775 a55cdeb6d4af100d68d0547bc5e57a2b 294 Gene3D G3DSA:1.10.150.130 1 106 1.7E-19 T 18-10-2018 IPR010998 Integrase/recombinase, N-terminal SHALO_0775 a55cdeb6d4af100d68d0547bc5e57a2b 294 Pfam PF00589 Phage integrase family 107 276 4.1E-18 T 18-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SHALO_0474 dd54af6d65c1d1257177514466391712 176 Gene3D G3DSA:3.30.70.940 1 116 3.5E-34 T 18-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 SHALO_0474 dd54af6d65c1d1257177514466391712 176 SUPERFAMILY SSF82679 3 111 9.29E-30 T 18-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 SHALO_0474 dd54af6d65c1d1257177514466391712 176 SMART SM00738 2 110 7.0E-36 T 18-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 SHALO_0474 dd54af6d65c1d1257177514466391712 176 SMART SM00739 121 148 0.0019 T 18-10-2018 IPR005824 KOW SHALO_0474 dd54af6d65c1d1257177514466391712 176 Gene3D G3DSA:2.30.30.30 117 175 6.9E-23 T 18-10-2018 IPR014722 Ribosomal protein L2, domain 2 SHALO_0474 dd54af6d65c1d1257177514466391712 176 PRINTS PR00338 Transcription termination factor NUSG signature 151 167 1.5E-15 T 18-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 SHALO_0474 dd54af6d65c1d1257177514466391712 176 PRINTS PR00338 Transcription termination factor NUSG signature 57 69 1.5E-15 T 18-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 SHALO_0474 dd54af6d65c1d1257177514466391712 176 PRINTS PR00338 Transcription termination factor NUSG signature 133 148 1.5E-15 T 18-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 SHALO_0474 dd54af6d65c1d1257177514466391712 176 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 2 175 20.91 T 18-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 SHALO_0474 dd54af6d65c1d1257177514466391712 176 SUPERFAMILY SSF50104 119 175 4.96E-16 T 18-10-2018 IPR008991 Translation protein SH3-like domain superfamily SHALO_0474 dd54af6d65c1d1257177514466391712 176 Pfam PF02357 Transcription termination factor nusG 4 106 5.3E-21 T 18-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 SHALO_0474 dd54af6d65c1d1257177514466391712 176 ProSitePatterns PS01014 Transcription termination factor nusG signature. 158 167 - T 18-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site SHALO_0474 dd54af6d65c1d1257177514466391712 176 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 5 175 5.0E-60 T 18-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 SHALO_2011 39f48b40315aaa76b99767e5fa64c04a 263 PIRSF PIRSF010376 1 262 1.2E-57 T 18-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 SHALO_2011 39f48b40315aaa76b99767e5fa64c04a 263 SUPERFAMILY SSF55060 166 259 3.41E-8 T 18-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily SHALO_2011 39f48b40315aaa76b99767e5fa64c04a 263 SUPERFAMILY SSF54211 3 160 9.87E-31 T 18-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold SHALO_2011 39f48b40315aaa76b99767e5fa64c04a 263 Pfam PF00288 GHMP kinases N terminal domain 90 146 2.0E-9 T 18-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 SHALO_2011 39f48b40315aaa76b99767e5fa64c04a 263 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 1 263 21.469 T 18-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 SHALO_2011 39f48b40315aaa76b99767e5fa64c04a 263 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 3 256 8.4E-51 T 18-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 SHALO_2011 39f48b40315aaa76b99767e5fa64c04a 263 Gene3D G3DSA:3.30.230.10 1 162 4.5E-41 T 18-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SHALO_2439 2edac11d6014553330f3811d81510f24 416 SMART SM00331 38 247 9.6E-8 T 18-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 SHALO_2439 2edac11d6014553330f3811d81510f24 416 Pfam PF13581 Histidine kinase-like ATPase domain 259 408 1.6E-12 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_2439 2edac11d6014553330f3811d81510f24 416 Gene3D G3DSA:3.30.565.10 255 413 8.6E-9 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_2439 2edac11d6014553330f3811d81510f24 416 Gene3D G3DSA:3.60.40.10 23 247 2.2E-26 T 18-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 SHALO_2439 2edac11d6014553330f3811d81510f24 416 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 62 245 2.9E-20 T 18-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 SHALO_0305 2fd1bb368dddc6ce381ec998f9f2a31b 562 Pfam PF16199 Radical_SAM C-terminal domain 207 289 6.1E-19 T 18-10-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 SHALO_0305 2fd1bb368dddc6ce381ec998f9f2a31b 562 Gene3D G3DSA:3.80.30.20 40 254 9.3E-16 T 18-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe SHALO_0305 2fd1bb368dddc6ce381ec998f9f2a31b 562 SUPERFAMILY SSF102114 24 253 3.01E-37 T 18-10-2018 SHALO_0305 2fd1bb368dddc6ce381ec998f9f2a31b 562 SMART SM00729 20 246 2.2E-33 T 18-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 SHALO_0305 2fd1bb368dddc6ce381ec998f9f2a31b 562 Pfam PF04055 Radical SAM superfamily 29 199 3.0E-13 T 18-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 SHALO_0305 2fd1bb368dddc6ce381ec998f9f2a31b 562 Gene3D G3DSA:3.40.50.150 312 538 4.7E-34 T 18-10-2018 SHALO_0305 2fd1bb368dddc6ce381ec998f9f2a31b 562 SUPERFAMILY SSF53335 339 493 1.42E-13 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_0305 2fd1bb368dddc6ce381ec998f9f2a31b 562 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 426 508 6.1E-10 T 18-10-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 MetaCyc: PWY-7892 SHALO_0305 2fd1bb368dddc6ce381ec998f9f2a31b 562 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 6 299 1.7E-72 T 18-10-2018 IPR005911 Protein YhcC-like GO:0051536 SHALO_1857 ea67c66f88dce292bf1fb58fa1af81a5 222 Gene3D G3DSA:3.40.50.2300 1 131 3.7E-31 T 18-10-2018 SHALO_1857 ea67c66f88dce292bf1fb58fa1af81a5 222 Pfam PF00072 Response regulator receiver domain 3 112 1.2E-23 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_1857 ea67c66f88dce292bf1fb58fa1af81a5 222 SMART SM00448 1 112 5.7E-30 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_1857 ea67c66f88dce292bf1fb58fa1af81a5 222 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 216 4.7E-12 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_1857 ea67c66f88dce292bf1fb58fa1af81a5 222 SMART SM00862 145 217 7.9E-10 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_1857 ea67c66f88dce292bf1fb58fa1af81a5 222 SUPERFAMILY SSF52172 1 179 1.99E-34 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_1857 ea67c66f88dce292bf1fb58fa1af81a5 222 Gene3D G3DSA:1.10.10.10 132 221 2.0E-15 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_1035 350e6daced258d4555073f9e32ca8094 248 SMART SM00862 155 225 8.4E-12 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_1035 350e6daced258d4555073f9e32ca8094 248 Pfam PF00486 Transcriptional regulatory protein, C terminal 159 225 1.2E-11 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_1035 350e6daced258d4555073f9e32ca8094 248 Gene3D G3DSA:3.40.50.2300 7 138 3.6E-32 T 18-10-2018 SHALO_1035 350e6daced258d4555073f9e32ca8094 248 Pfam PF00072 Response regulator receiver domain 13 122 2.3E-24 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_1035 350e6daced258d4555073f9e32ca8094 248 SMART SM00448 11 122 3.1E-26 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_1035 350e6daced258d4555073f9e32ca8094 248 Gene3D G3DSA:1.10.10.10 139 234 3.1E-16 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_1035 350e6daced258d4555073f9e32ca8094 248 SUPERFAMILY SSF52172 10 183 8.25E-36 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_0493 9001e71f5c6763cc112efe773013359c 849 TIGRFAM TIGR00509 bisC_fam: molybdopterin guanine dinucleotide-containing S/N-oxide reductases 47 846 0.0 T 18-10-2018 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase GO:0016491|GO:0055114 SHALO_0493 9001e71f5c6763cc112efe773013359c 849 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 529 546 - T 18-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 SHALO_0493 9001e71f5c6763cc112efe773013359c 849 SUPERFAMILY SSF50692 699 845 4.29E-44 T 18-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily SHALO_0493 9001e71f5c6763cc112efe773013359c 849 SUPERFAMILY SSF53706 49 705 3.4E-167 T 18-10-2018 SHALO_0493 9001e71f5c6763cc112efe773013359c 849 Gene3D G3DSA:2.40.40.20 679 841 1.6E-54 T 18-10-2018 SHALO_0493 9001e71f5c6763cc112efe773013359c 849 Pfam PF00384 Molybdopterin oxidoreductase 90 583 5.6E-86 T 18-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0493 9001e71f5c6763cc112efe773013359c 849 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 744 771 - T 18-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 SHALO_0493 9001e71f5c6763cc112efe773013359c 849 Pfam PF01568 Molydopterin dinucleotide binding domain 705 821 4.8E-28 T 18-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 SHALO_0431 25d8f9108d4c9dc235580ca7c102a86f 96 SUPERFAMILY SSF81301 3 82 2.49E-8 T 18-10-2018 SHALO_0431 25d8f9108d4c9dc235580ca7c102a86f 96 Gene3D G3DSA:3.30.460.10 3 93 5.1E-9 T 18-10-2018 SHALO_0431 25d8f9108d4c9dc235580ca7c102a86f 96 Pfam PF01909 Nucleotidyltransferase domain 19 81 3.4E-6 T 18-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 SHALO_2740 31797a8bd4bb6010a6f4c8575de6cc7a 204 Pfam PF09347 Domain of unknown function (DUF1989) 11 176 4.3E-61 T 18-10-2018 IPR018959 Protein of unknown function DUF1989 SHALO_2740 31797a8bd4bb6010a6f4c8575de6cc7a 204 TIGRFAM TIGR03424 urea_degr_1: urea carboxylase-associated protein 1 6 202 1.1E-102 T 18-10-2018 IPR017791 Urea carboxylase-associated protein 1 SHALO_1793 5ac4325a9b2fd9e71690328e50a36ddf 372 Pfam PF12327 FtsZ family, C-terminal domain 224 320 6.8E-24 T 18-10-2018 IPR024757 Cell division protein FtsZ, C-terminal SHALO_1793 5ac4325a9b2fd9e71690328e50a36ddf 372 Gene3D G3DSA:3.40.50.1440 8 222 5.0E-71 T 18-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 SHALO_1793 5ac4325a9b2fd9e71690328e50a36ddf 372 PRINTS PR00423 Cell division protein FtsZ signature 126 147 2.8E-38 T 18-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 SHALO_1793 5ac4325a9b2fd9e71690328e50a36ddf 372 PRINTS PR00423 Cell division protein FtsZ signature 98 118 2.8E-38 T 18-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 SHALO_1793 5ac4325a9b2fd9e71690328e50a36ddf 372 PRINTS PR00423 Cell division protein FtsZ signature 189 211 2.8E-38 T 18-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 SHALO_1793 5ac4325a9b2fd9e71690328e50a36ddf 372 PRINTS PR00423 Cell division protein FtsZ signature 214 235 2.8E-38 T 18-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 SHALO_1793 5ac4325a9b2fd9e71690328e50a36ddf 372 SMART SM00865 209 328 7.5E-46 T 18-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 SHALO_1793 5ac4325a9b2fd9e71690328e50a36ddf 372 SUPERFAMILY SSF52490 15 206 1.96E-60 T 18-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 SHALO_1793 5ac4325a9b2fd9e71690328e50a36ddf 372 SMART SM00864 16 205 9.8E-100 T 18-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 SHALO_1793 5ac4325a9b2fd9e71690328e50a36ddf 372 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 18-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 SHALO_1793 5ac4325a9b2fd9e71690328e50a36ddf 372 SUPERFAMILY SSF55307 208 323 7.33E-39 T 18-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 SHALO_1793 5ac4325a9b2fd9e71690328e50a36ddf 372 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 11 340 4.4E-114 T 18-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 SHALO_1793 5ac4325a9b2fd9e71690328e50a36ddf 372 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 16 173 3.5E-38 T 18-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 SHALO_1793 5ac4325a9b2fd9e71690328e50a36ddf 372 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 12 352 34.642 T 18-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 SHALO_1793 5ac4325a9b2fd9e71690328e50a36ddf 372 Gene3D G3DSA:3.30.1330.20 223 336 2.7E-31 T 18-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 SHALO_0554 0b09ee36c8e80fba3a46e090dfe7d134 198 Gene3D G3DSA:3.10.450.50 36 164 3.9E-32 T 18-10-2018 SHALO_0554 0b09ee36c8e80fba3a46e090dfe7d134 198 Pfam PF05494 MlaC protein 33 191 2.0E-35 T 18-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC SHALO_0554 0b09ee36c8e80fba3a46e090dfe7d134 198 Gene3D G3DSA:1.10.10.640 65 189 3.9E-32 T 18-10-2018 SHALO_1974 abe4be84135cd09b6e777b3ad4abe89d 267 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 9 259 1.8E-50 T 18-10-2018 IPR017039 Virulence factor BrkB SHALO_1974 abe4be84135cd09b6e777b3ad4abe89d 267 Pfam PF03631 Virulence factor BrkB 18 259 6.0E-46 T 18-10-2018 IPR017039 Virulence factor BrkB SHALO_1974 abe4be84135cd09b6e777b3ad4abe89d 267 PIRSF PIRSF035875 5 267 1.9E-44 T 18-10-2018 IPR017039 Virulence factor BrkB SHALO_0330 799d0f41bb7f8e6b52fb031947ef5426 211 Gene3D G3DSA:3.90.870.10 2 210 9.2E-77 T 18-10-2018 SHALO_0330 799d0f41bb7f8e6b52fb031947ef5426 211 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 16 205 1.7E-73 T 18-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 SHALO_0330 799d0f41bb7f8e6b52fb031947ef5426 211 SUPERFAMILY SSF55821 11 208 4.58E-72 T 18-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily SHALO_0330 799d0f41bb7f8e6b52fb031947ef5426 211 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 12 206 2.9E-68 T 18-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 SHALO_0330 799d0f41bb7f8e6b52fb031947ef5426 211 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 9 210 36.381 T 18-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 SHALO_0631 8743b76577d45f40b619661ed7dc4c4f 424 Pfam PF05538 Campylobacter major outer membrane protein 1 409 4.3E-9 T 18-10-2018 IPR008439 Campylobacter major outer membrane SHALO_0631 8743b76577d45f40b619661ed7dc4c4f 424 Gene3D G3DSA:2.40.160.10 33 424 4.5E-21 T 18-10-2018 IPR023614 Porin domain superfamily SHALO_2973 f9bb01f62f88aa8ce701efab801ab80d 339 SUPERFAMILY SSF54862 221 276 2.3E-13 T 18-10-2018 SHALO_2973 f9bb01f62f88aa8ce701efab801ab80d 339 Pfam PF13187 4Fe-4S dicluster domain 228 274 2.5E-7 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_2973 f9bb01f62f88aa8ce701efab801ab80d 339 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 56 67 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_2973 f9bb01f62f88aa8ce701efab801ab80d 339 SUPERFAMILY SSF54862 29 75 2.36E-10 T 18-10-2018 SHALO_2973 f9bb01f62f88aa8ce701efab801ab80d 339 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 228 239 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_2973 f9bb01f62f88aa8ce701efab801ab80d 339 Gene3D G3DSA:3.30.70.20 223 287 1.4E-10 T 18-10-2018 SHALO_2973 f9bb01f62f88aa8ce701efab801ab80d 339 Pfam PF00037 4Fe-4S binding domain 54 71 4.1E-6 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_2973 f9bb01f62f88aa8ce701efab801ab80d 339 Gene3D G3DSA:3.30.70.20 16 75 1.5E-7 T 18-10-2018 SHALO_0569 8b22e4c8b2c0edf682e50e224d1afc18 342 SUPERFAMILY SSF46626 193 334 2.36E-32 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_0569 8b22e4c8b2c0edf682e50e224d1afc18 342 PIRSF PIRSF000294 1 340 7.5E-125 T 18-10-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 SHALO_0569 8b22e4c8b2c0edf682e50e224d1afc18 342 Pfam PF00034 Cytochrome c 214 307 6.3E-8 T 18-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_0569 8b22e4c8b2c0edf682e50e224d1afc18 342 Pfam PF03150 Di-haem cytochrome c peroxidase 56 205 2.9E-41 T 18-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 SHALO_0569 8b22e4c8b2c0edf682e50e224d1afc18 342 Gene3D G3DSA:1.10.760.10 52 192 1.0E-92 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_0569 8b22e4c8b2c0edf682e50e224d1afc18 342 SUPERFAMILY SSF46626 46 194 5.84E-43 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_0569 8b22e4c8b2c0edf682e50e224d1afc18 342 Gene3D G3DSA:1.10.760.10 193 319 1.0E-92 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_2887 36c57f4b06fef36a356aacf698f5a4fb 232 Gene3D G3DSA:3.30.70.20 5 64 9.1E-38 T 18-10-2018 SHALO_2887 36c57f4b06fef36a356aacf698f5a4fb 232 Gene3D G3DSA:3.30.70.20 167 228 2.3E-19 T 18-10-2018 SHALO_2887 36c57f4b06fef36a356aacf698f5a4fb 232 Pfam PF13247 4Fe-4S dicluster domain 51 114 1.5E-12 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_2887 36c57f4b06fef36a356aacf698f5a4fb 232 Pfam PF13247 4Fe-4S dicluster domain 160 195 7.9E-8 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_2887 36c57f4b06fef36a356aacf698f5a4fb 232 SUPERFAMILY SSF54862 3 229 3.03E-65 T 18-10-2018 SHALO_2887 36c57f4b06fef36a356aacf698f5a4fb 232 Gene3D G3DSA:3.30.70.20 65 113 9.1E-38 T 18-10-2018 SHALO_2208 bef12fe857067c2845c674e1f29df422 203 Gene3D G3DSA:3.40.50.880 1 203 1.2E-80 T 18-10-2018 IPR029062 Class I glutamine amidotransferase-like SHALO_2208 bef12fe857067c2845c674e1f29df422 203 SUPERFAMILY SSF52317 2 202 1.53E-57 T 18-10-2018 IPR029062 Class I glutamine amidotransferase-like SHALO_2208 bef12fe857067c2845c674e1f29df422 203 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 1 203 36.275 T 18-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 SHALO_2208 bef12fe857067c2845c674e1f29df422 203 PIRSF PIRSF000495 1 203 3.3E-74 T 18-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 SHALO_2208 bef12fe857067c2845c674e1f29df422 203 Pfam PF00117 Glutamine amidotransferase class-I 4 201 5.3E-22 T 18-10-2018 IPR017926 Glutamine amidotransferase SHALO_2208 bef12fe857067c2845c674e1f29df422 203 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 2 202 5.6E-72 T 18-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 SHALO_2150 c09edac93f83b2d2ad18c2f5c3dac539 405 Hamap MF_02122 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 25 405 43.091 T 18-10-2018 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family GO:0008666 KEGG: 00300+2.3.1.117 SHALO_2150 c09edac93f83b2d2ad18c2f5c3dac539 405 Gene3D G3DSA:3.30.70.2010 6 176 5.5E-59 T 18-10-2018 SHALO_2150 c09edac93f83b2d2ad18c2f5c3dac539 405 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 300 332 1.9E-12 T 18-10-2018 IPR001451 Hexapeptide repeat SHALO_2150 c09edac93f83b2d2ad18c2f5c3dac539 405 Gene3D G3DSA:3.30.60.70 177 217 7.2E-18 T 18-10-2018 IPR038361 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain superfamily KEGG: 00300+2.3.1.117 SHALO_2150 c09edac93f83b2d2ad18c2f5c3dac539 405 Pfam PF14789 Tetrahydrodipicolinate N-succinyltransferase middle 177 217 1.7E-11 T 18-10-2018 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117 SHALO_2150 c09edac93f83b2d2ad18c2f5c3dac539 405 SUPERFAMILY SSF51161 134 387 8.84E-37 T 18-10-2018 IPR011004 Trimeric LpxA-like superfamily SHALO_2150 c09edac93f83b2d2ad18c2f5c3dac539 405 Gene3D G3DSA:2.160.10.10 218 405 3.1E-59 T 18-10-2018 SHALO_2150 c09edac93f83b2d2ad18c2f5c3dac539 405 Pfam PF14790 Tetrahydrodipicolinate N-succinyltransferase N-terminal 11 175 5.0E-70 T 18-10-2018 SHALO_0595 f625637a4a7f517c1a5420261fe46f76 1018 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 586 750 9.3E-43 T 18-10-2018 IPR000160 GGDEF domain SHALO_0595 f625637a4a7f517c1a5420261fe46f76 1018 Gene3D G3DSA:3.30.70.270 589 765 7.3E-61 T 18-10-2018 SHALO_0595 f625637a4a7f517c1a5420261fe46f76 1018 Pfam PF00990 Diguanylate cyclase, GGDEF domain 590 747 5.8E-50 T 18-10-2018 IPR000160 GGDEF domain SHALO_0595 f625637a4a7f517c1a5420261fe46f76 1018 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 24 269 6.7E-47 T 18-10-2018 SHALO_0595 f625637a4a7f517c1a5420261fe46f76 1018 SMART SM00091 465 531 7.3E-4 T 18-10-2018 IPR000014 PAS domain SHALO_0595 f625637a4a7f517c1a5420261fe46f76 1018 SMART SM00091 345 411 8.1 T 18-10-2018 IPR000014 PAS domain SHALO_0595 f625637a4a7f517c1a5420261fe46f76 1018 SMART SM00052 761 1007 1.2E-99 T 18-10-2018 IPR001633 EAL domain SHALO_0595 f625637a4a7f517c1a5420261fe46f76 1018 Gene3D G3DSA:3.30.450.20 467 588 7.8E-31 T 18-10-2018 SHALO_0595 f625637a4a7f517c1a5420261fe46f76 1018 Pfam PF08448 PAS fold 351 459 3.5E-8 T 18-10-2018 IPR013656 PAS fold-4 SHALO_0595 f625637a4a7f517c1a5420261fe46f76 1018 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 469 586 6.9E-18 T 18-10-2018 IPR000014 PAS domain SHALO_0595 f625637a4a7f517c1a5420261fe46f76 1018 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 347 464 5.6E-9 T 18-10-2018 IPR000014 PAS domain SHALO_0595 f625637a4a7f517c1a5420261fe46f76 1018 Gene3D G3DSA:3.40.190.10 110 228 1.9E-32 T 18-10-2018 SHALO_0595 f625637a4a7f517c1a5420261fe46f76 1018 Pfam PF00563 EAL domain 768 1002 7.3E-70 T 18-10-2018 IPR001633 EAL domain SHALO_0595 f625637a4a7f517c1a5420261fe46f76 1018 Gene3D G3DSA:3.20.20.450 766 1014 1.8E-89 T 18-10-2018 IPR035919 EAL domain superfamily SHALO_0595 f625637a4a7f517c1a5420261fe46f76 1018 SUPERFAMILY SSF141868 768 1012 7.45E-84 T 18-10-2018 IPR035919 EAL domain superfamily SHALO_0595 f625637a4a7f517c1a5420261fe46f76 1018 SUPERFAMILY SSF55785 471 577 4.36E-25 T 18-10-2018 IPR035965 PAS domain superfamily SHALO_0595 f625637a4a7f517c1a5420261fe46f76 1018 Gene3D G3DSA:3.30.450.20 330 466 1.1E-15 T 18-10-2018 SHALO_0595 f625637a4a7f517c1a5420261fe46f76 1018 SMART SM00267 579 751 1.7E-66 T 18-10-2018 IPR000160 GGDEF domain SHALO_0595 f625637a4a7f517c1a5420261fe46f76 1018 Gene3D G3DSA:3.40.190.10 25 254 1.9E-32 T 18-10-2018 SHALO_0595 f625637a4a7f517c1a5420261fe46f76 1018 SUPERFAMILY SSF55073 595 752 2.28E-51 T 18-10-2018 IPR029787 Nucleotide cyclase SHALO_0595 f625637a4a7f517c1a5420261fe46f76 1018 SUPERFAMILY SSF53850 34 267 9.52E-21 T 18-10-2018 SHALO_0595 f625637a4a7f517c1a5420261fe46f76 1018 SUPERFAMILY SSF55785 356 465 1.77E-13 T 18-10-2018 IPR035965 PAS domain superfamily SHALO_0595 f625637a4a7f517c1a5420261fe46f76 1018 Pfam PF13426 PAS domain 476 578 4.0E-15 T 18-10-2018 IPR000014 PAS domain SHALO_1556 8f3d4a0265d47660475633491473eb59 94 Gene3D G3DSA:4.10.520.10 3 94 1.5E-28 T 18-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 SHALO_1556 8f3d4a0265d47660475633491473eb59 94 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 5.4E-9 T 18-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 SHALO_1556 8f3d4a0265d47660475633491473eb59 94 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 5.4E-9 T 18-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 SHALO_1556 8f3d4a0265d47660475633491473eb59 94 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 5.4E-9 T 18-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 SHALO_1556 8f3d4a0265d47660475633491473eb59 94 SMART SM00411 3 92 3.0E-32 T 18-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 SHALO_1556 8f3d4a0265d47660475633491473eb59 94 SUPERFAMILY SSF47729 3 92 4.42E-26 T 18-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 SHALO_1556 8f3d4a0265d47660475633491473eb59 94 Pfam PF00216 Bacterial DNA-binding protein 3 91 9.5E-27 T 18-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 SHALO_0315 bd756985075d2d9c078b0357bdbcb208 393 SMART SM00387 270 377 5.5E-17 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_0315 bd756985075d2d9c078b0357bdbcb208 393 SUPERFAMILY SSF47384 158 223 2.55E-7 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SHALO_0315 bd756985075d2d9c078b0357bdbcb208 393 Gene3D G3DSA:3.30.565.10 227 380 3.6E-28 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_0315 bd756985075d2d9c078b0357bdbcb208 393 SUPERFAMILY SSF55874 222 373 1.7E-27 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_0315 bd756985075d2d9c078b0357bdbcb208 393 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 273 376 8.1E-14 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_0315 bd756985075d2d9c078b0357bdbcb208 393 Gene3D G3DSA:1.10.287.130 156 225 4.6E-8 T 18-10-2018 SHALO_0976 a55689d3d4452880281158f232b4f412 531 SUPERFAMILY SSF58104 220 529 2.22E-49 T 18-10-2018 SHALO_0976 a55689d3d4452880281158f232b4f412 531 SMART SM00283 260 528 9.1E-25 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_0976 a55689d3d4452880281158f232b4f412 531 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 345 475 4.7E-31 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_0976 a55689d3d4452880281158f232b4f412 531 Gene3D G3DSA:1.10.287.950 198 530 1.0E-49 T 18-10-2018 SHALO_0976 a55689d3d4452880281158f232b4f412 531 Gene3D G3DSA:3.30.450.290 37 171 8.2E-13 T 18-10-2018 SHALO_0976 a55689d3d4452880281158f232b4f412 531 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 394 423 4.2E-19 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 SHALO_0976 a55689d3d4452880281158f232b4f412 531 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 4.2E-19 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 SHALO_0976 a55689d3d4452880281158f232b4f412 531 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 365 392 4.2E-19 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 SHALO_2644 3749bdd266042a71630b2bd693ecca25 558 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 381 550 6.1E-41 T 18-10-2018 IPR000160 GGDEF domain SHALO_2644 3749bdd266042a71630b2bd693ecca25 558 Gene3D G3DSA:3.30.450.20 133 248 3.5E-19 T 18-10-2018 SHALO_2644 3749bdd266042a71630b2bd693ecca25 558 SMART SM00091 136 204 0.23 T 18-10-2018 IPR000014 PAS domain SHALO_2644 3749bdd266042a71630b2bd693ecca25 558 SMART SM00091 259 325 1.4E-4 T 18-10-2018 IPR000014 PAS domain SHALO_2644 3749bdd266042a71630b2bd693ecca25 558 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 260 379 1.3E-20 T 18-10-2018 IPR000014 PAS domain SHALO_2644 3749bdd266042a71630b2bd693ecca25 558 SUPERFAMILY SSF55785 143 256 1.29E-12 T 18-10-2018 IPR035965 PAS domain superfamily SHALO_2644 3749bdd266042a71630b2bd693ecca25 558 Pfam PF08447 PAS fold 159 246 3.0E-13 T 18-10-2018 IPR013655 PAS fold-3 GO:0005515 SHALO_2644 3749bdd266042a71630b2bd693ecca25 558 Pfam PF00990 Diguanylate cyclase, GGDEF domain 384 546 4.3E-46 T 18-10-2018 IPR000160 GGDEF domain SHALO_2644 3749bdd266042a71630b2bd693ecca25 558 Gene3D G3DSA:3.30.70.270 381 558 2.9E-55 T 18-10-2018 SHALO_2644 3749bdd266042a71630b2bd693ecca25 558 SMART SM00267 373 551 9.8E-57 T 18-10-2018 IPR000160 GGDEF domain SHALO_2644 3749bdd266042a71630b2bd693ecca25 558 SUPERFAMILY SSF55785 268 370 6.63E-27 T 18-10-2018 IPR035965 PAS domain superfamily SHALO_2644 3749bdd266042a71630b2bd693ecca25 558 Gene3D G3DSA:3.30.450.20 260 380 4.5E-35 T 18-10-2018 SHALO_2644 3749bdd266042a71630b2bd693ecca25 558 SUPERFAMILY SSF55073 389 553 4.87E-45 T 18-10-2018 IPR029787 Nucleotide cyclase SHALO_2644 3749bdd266042a71630b2bd693ecca25 558 Pfam PF13426 PAS domain 270 372 2.5E-16 T 18-10-2018 IPR000014 PAS domain SHALO_2644 3749bdd266042a71630b2bd693ecca25 558 SMART SM00086 331 373 0.056 T 18-10-2018 IPR001610 PAC motif SHALO_2644 3749bdd266042a71630b2bd693ecca25 558 SMART SM00086 210 253 7.4 T 18-10-2018 IPR001610 PAC motif SHALO_2049 b18505695426050c37823a79d862a549 184 SUPERFAMILY SSF52972 2 182 2.62E-38 T 18-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like SHALO_2049 b18505695426050c37823a79d862a549 184 Gene3D G3DSA:3.90.950.10 2 184 8.6E-37 T 18-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like SHALO_2049 b18505695426050c37823a79d862a549 184 Pfam PF02545 Maf-like protein 4 182 1.5E-27 T 18-10-2018 IPR003697 Maf-like protein GO:0047429 SHALO_2049 b18505695426050c37823a79d862a549 184 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 182 1.8E-39 T 18-10-2018 IPR003697 Maf-like protein GO:0047429 SHALO_2049 b18505695426050c37823a79d862a549 184 PIRSF PIRSF006305 1 184 1.7E-37 T 18-10-2018 IPR003697 Maf-like protein GO:0047429 SHALO_2460 f2a27f505b77d78a7a59d2901f0131f5 430 Pfam PF00072 Response regulator receiver domain 4 115 9.6E-26 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_2460 f2a27f505b77d78a7a59d2901f0131f5 430 SMART SM00448 2 114 3.6E-35 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_2460 f2a27f505b77d78a7a59d2901f0131f5 430 SUPERFAMILY SSF52172 1 131 1.35E-37 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_2460 f2a27f505b77d78a7a59d2901f0131f5 430 Gene3D G3DSA:3.40.50.12740 2 163 1.2E-37 T 18-10-2018 SHALO_1247 591a2e7d358a18599a364ad665ff8f96 374 SMART SM00267 203 374 3.0E-56 T 18-10-2018 IPR000160 GGDEF domain SHALO_1247 591a2e7d358a18599a364ad665ff8f96 374 SUPERFAMILY SSF55073 219 373 3.06E-46 T 18-10-2018 IPR029787 Nucleotide cyclase SHALO_1247 591a2e7d358a18599a364ad665ff8f96 374 Pfam PF00990 Diguanylate cyclase, GGDEF domain 214 371 2.2E-46 T 18-10-2018 IPR000160 GGDEF domain SHALO_1247 591a2e7d358a18599a364ad665ff8f96 374 Gene3D G3DSA:3.30.70.270 201 374 4.8E-55 T 18-10-2018 SHALO_1247 591a2e7d358a18599a364ad665ff8f96 374 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 210 373 9.6E-52 T 18-10-2018 IPR000160 GGDEF domain SHALO_2042 4d4c1cf480eec154414bc282289754ee 421 Pfam PF01136 Peptidase family U32 79 307 2.7E-83 T 18-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 SHALO_2042 4d4c1cf480eec154414bc282289754ee 421 ProSitePatterns PS01276 Peptidase family U32 signature. 163 181 - T 18-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 SHALO_2934 120fda3d78789c2ad2d2b781ab5d91d0 423 SMART SM01193 4 133 1.4E-86 T 18-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SHALO_2934 120fda3d78789c2ad2d2b781ab5d91d0 423 SUPERFAMILY SSF51604 137 411 1.35E-118 T 18-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily SHALO_2934 120fda3d78789c2ad2d2b781ab5d91d0 423 Gene3D G3DSA:3.20.20.120 127 423 3.0E-129 T 18-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily SHALO_2934 120fda3d78789c2ad2d2b781ab5d91d0 423 Gene3D G3DSA:3.30.390.10 3 126 7.9E-52 T 18-10-2018 IPR029017 Enolase-like, N-terminal SHALO_2934 120fda3d78789c2ad2d2b781ab5d91d0 423 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 422 1.0E-199 T 18-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SHALO_2934 120fda3d78789c2ad2d2b781ab5d91d0 423 SUPERFAMILY SSF54826 4 135 1.93E-51 T 18-10-2018 SHALO_2934 120fda3d78789c2ad2d2b781ab5d91d0 423 Hamap MF_00318 Enolase [eno]. 2 410 42.631 T 18-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SHALO_2934 120fda3d78789c2ad2d2b781ab5d91d0 423 PRINTS PR00148 Enolase signature 333 347 1.3E-41 T 18-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SHALO_2934 120fda3d78789c2ad2d2b781ab5d91d0 423 PRINTS PR00148 Enolase signature 310 321 1.3E-41 T 18-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SHALO_2934 120fda3d78789c2ad2d2b781ab5d91d0 423 PRINTS PR00148 Enolase signature 106 122 1.3E-41 T 18-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SHALO_2934 120fda3d78789c2ad2d2b781ab5d91d0 423 PRINTS PR00148 Enolase signature 37 51 1.3E-41 T 18-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SHALO_2934 120fda3d78789c2ad2d2b781ab5d91d0 423 PRINTS PR00148 Enolase signature 160 173 1.3E-41 T 18-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SHALO_2934 120fda3d78789c2ad2d2b781ab5d91d0 423 PRINTS PR00148 Enolase signature 362 379 1.3E-41 T 18-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SHALO_2934 120fda3d78789c2ad2d2b781ab5d91d0 423 PIRSF PIRSF001400 1 423 7.2E-183 T 18-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SHALO_2934 120fda3d78789c2ad2d2b781ab5d91d0 423 SMART SM01192 138 423 2.4E-199 T 18-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SHALO_2934 120fda3d78789c2ad2d2b781ab5d91d0 423 Pfam PF00113 Enolase, C-terminal TIM barrel domain 139 420 3.3E-115 T 18-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SHALO_2934 120fda3d78789c2ad2d2b781ab5d91d0 423 Pfam PF03952 Enolase, N-terminal domain 4 133 7.2E-55 T 18-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SHALO_2934 120fda3d78789c2ad2d2b781ab5d91d0 423 ProSitePatterns PS00164 Enolase signature. 333 346 - T 18-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_2941 ce823f9470394237ef46df35687ecbf1 961 Pfam PF00990 Diguanylate cyclase, GGDEF domain 533 689 3.0E-53 T 18-10-2018 IPR000160 GGDEF domain SHALO_2941 ce823f9470394237ef46df35687ecbf1 961 Pfam PF08269 Cache domain 38 327 1.5E-70 T 18-10-2018 IPR004010 Double Cache domain 2 SHALO_2941 ce823f9470394237ef46df35687ecbf1 961 SUPERFAMILY SSF55785 389 512 2.44E-14 T 18-10-2018 IPR035965 PAS domain superfamily SHALO_2941 ce823f9470394237ef46df35687ecbf1 961 SMART SM00052 703 949 2.5E-108 T 18-10-2018 IPR001633 EAL domain SHALO_2941 ce823f9470394237ef46df35687ecbf1 961 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 530 692 7.2E-47 T 18-10-2018 IPR000160 GGDEF domain SHALO_2941 ce823f9470394237ef46df35687ecbf1 961 Gene3D G3DSA:3.30.450.20 396 517 3.5E-17 T 18-10-2018 SHALO_2941 ce823f9470394237ef46df35687ecbf1 961 Pfam PF13426 PAS domain 408 512 8.7E-11 T 18-10-2018 IPR000014 PAS domain SHALO_2941 ce823f9470394237ef46df35687ecbf1 961 SMART SM00267 521 693 9.0E-68 T 18-10-2018 IPR000160 GGDEF domain SHALO_2941 ce823f9470394237ef46df35687ecbf1 961 SUPERFAMILY SSF141868 708 957 4.58E-85 T 18-10-2018 IPR035919 EAL domain superfamily SHALO_2941 ce823f9470394237ef46df35687ecbf1 961 Gene3D G3DSA:3.30.450.20 218 329 1.6E-19 T 18-10-2018 SHALO_2941 ce823f9470394237ef46df35687ecbf1 961 Gene3D G3DSA:3.30.450.20 68 217 4.2E-29 T 18-10-2018 SHALO_2941 ce823f9470394237ef46df35687ecbf1 961 Gene3D G3DSA:3.30.70.270 528 706 1.3E-63 T 18-10-2018 SHALO_2941 ce823f9470394237ef46df35687ecbf1 961 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 394 520 8.8E-9 T 18-10-2018 IPR000014 PAS domain SHALO_2941 ce823f9470394237ef46df35687ecbf1 961 Gene3D G3DSA:3.20.20.450 707 958 2.3E-95 T 18-10-2018 IPR035919 EAL domain superfamily SHALO_2941 ce823f9470394237ef46df35687ecbf1 961 SUPERFAMILY SSF55073 537 695 1.45E-52 T 18-10-2018 IPR029787 Nucleotide cyclase SHALO_2941 ce823f9470394237ef46df35687ecbf1 961 Pfam PF00563 EAL domain 709 944 6.2E-69 T 18-10-2018 IPR001633 EAL domain SHALO_2941 ce823f9470394237ef46df35687ecbf1 961 SMART SM01049 190 277 4.0E-5 T 18-10-2018 IPR033480 Single Cache domain 2 SHALO_2941 ce823f9470394237ef46df35687ecbf1 961 SMART SM01049 74 168 2.2E-21 T 18-10-2018 IPR033480 Single Cache domain 2 SHALO_2275 2908d61fcb85b086a82438b3f1129ff7 404 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 2 402 3.1E-171 T 18-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 SHALO_2275 2908d61fcb85b086a82438b3f1129ff7 404 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2 244 6.1E-49 T 18-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal SHALO_2275 2908d61fcb85b086a82438b3f1129ff7 404 SMART SM00825 Beta-ketoacyl synthase 4 404 8.1E-12 T 18-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain SHALO_2275 2908d61fcb85b086a82438b3f1129ff7 404 Gene3D G3DSA:3.40.47.10 1 253 9.6E-78 T 18-10-2018 IPR016039 Thiolase-like GO:0003824 SHALO_2275 2908d61fcb85b086a82438b3f1129ff7 404 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 361 1.7E-30 T 18-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal SHALO_2275 2908d61fcb85b086a82438b3f1129ff7 404 PIRSF PIRSF000447 1 404 7.9E-156 T 18-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 SHALO_2275 2908d61fcb85b086a82438b3f1129ff7 404 SUPERFAMILY SSF53901 212 403 1.43E-65 T 18-10-2018 IPR016039 Thiolase-like GO:0003824 SHALO_2275 2908d61fcb85b086a82438b3f1129ff7 404 SUPERFAMILY SSF53901 2 249 3.38E-64 T 18-10-2018 IPR016039 Thiolase-like GO:0003824 SHALO_2275 2908d61fcb85b086a82438b3f1129ff7 404 Gene3D G3DSA:3.40.47.10 258 404 1.2E-46 T 18-10-2018 IPR016039 Thiolase-like GO:0003824 SHALO_0736 5ef4b97a9698971ef10fa23be6574986 415 SUPERFAMILY SSF55874 267 407 2.88E-18 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_0736 5ef4b97a9698971ef10fa23be6574986 415 Pfam PF00672 HAMP domain 158 203 1.0E-7 T 18-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 SHALO_0736 5ef4b97a9698971ef10fa23be6574986 415 SMART SM00387 311 413 1.9E-9 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_0736 5ef4b97a9698971ef10fa23be6574986 415 Gene3D G3DSA:3.30.565.10 271 410 8.3E-15 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_0736 5ef4b97a9698971ef10fa23be6574986 415 SMART SM00304 155 207 7.2E-6 T 18-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 SHALO_0736 5ef4b97a9698971ef10fa23be6574986 415 SUPERFAMILY SSF158472 158 206 5.89E-7 T 18-10-2018 SHALO_0736 5ef4b97a9698971ef10fa23be6574986 415 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 319 397 2.7E-8 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_0736 5ef4b97a9698971ef10fa23be6574986 415 SUPERFAMILY SSF47384 192 263 5.69E-6 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SHALO_0736 5ef4b97a9698971ef10fa23be6574986 415 Gene3D G3DSA:1.10.287.130 154 266 3.6E-16 T 18-10-2018 SHALO_2311 c1a1f5d7ebd4aa1d747b992ec2920996 386 SUPERFAMILY SSF52440 3 111 1.87E-28 T 18-10-2018 IPR016185 Pre-ATP-grasp domain superfamily SHALO_2311 c1a1f5d7ebd4aa1d747b992ec2920996 386 Gene3D G3DSA:3.40.50.20 1 122 2.2E-44 T 18-10-2018 SHALO_2311 c1a1f5d7ebd4aa1d747b992ec2920996 386 SUPERFAMILY SSF51246 332 382 8.63E-7 T 18-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 SHALO_2311 c1a1f5d7ebd4aa1d747b992ec2920996 386 Pfam PF02222 ATP-grasp domain 122 292 2.4E-56 T 18-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type SHALO_2311 c1a1f5d7ebd4aa1d747b992ec2920996 386 Hamap MF_01643 Formate-dependent phosphoribosylglycinamide formyltransferase [purT]. 7 386 46.041 T 18-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 SHALO_2311 c1a1f5d7ebd4aa1d747b992ec2920996 386 Gene3D G3DSA:3.30.1490.20 123 194 1.1E-26 T 18-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 SHALO_2311 c1a1f5d7ebd4aa1d747b992ec2920996 386 Gene3D G3DSA:3.30.470.20 195 385 3.7E-54 T 18-10-2018 SHALO_2311 c1a1f5d7ebd4aa1d747b992ec2920996 386 SUPERFAMILY SSF56059 112 311 4.07E-57 T 18-10-2018 SHALO_2433 f608bc53a08e13d75a07585f48342ef0 276 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 1.5E-30 T 18-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_2433 f608bc53a08e13d75a07585f48342ef0 276 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 274 44.996 T 18-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 SHALO_2433 f608bc53a08e13d75a07585f48342ef0 276 PIRSF PIRSF002158 13 276 1.6E-95 T 18-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_2433 f608bc53a08e13d75a07585f48342ef0 276 SUPERFAMILY SSF50249 2 119 3.29E-41 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold SHALO_2433 f608bc53a08e13d75a07585f48342ef0 276 SUPERFAMILY SSF50104 127 273 1.08E-60 T 18-10-2018 IPR008991 Translation protein SH3-like domain superfamily SHALO_2433 f608bc53a08e13d75a07585f48342ef0 276 SMART SM01383 42 118 8.4E-44 T 18-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_2433 f608bc53a08e13d75a07585f48342ef0 276 ProSitePatterns PS00467 Ribosomal protein L2 signature. 219 230 - T 18-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_2433 f608bc53a08e13d75a07585f48342ef0 276 SMART SM01382 125 253 1.0E-90 T 18-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 SHALO_2433 f608bc53a08e13d75a07585f48342ef0 276 Gene3D G3DSA:2.30.30.30 120 197 4.1E-32 T 18-10-2018 IPR014722 Ribosomal protein L2, domain 2 SHALO_2433 f608bc53a08e13d75a07585f48342ef0 276 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 274 5.9E-130 T 18-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 SHALO_2433 f608bc53a08e13d75a07585f48342ef0 276 Gene3D G3DSA:2.40.50.140 1 114 1.5E-39 T 18-10-2018 SHALO_2433 f608bc53a08e13d75a07585f48342ef0 276 Gene3D G3DSA:4.10.950.10 198 274 3.5E-33 T 18-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_2433 f608bc53a08e13d75a07585f48342ef0 276 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 126 251 3.5E-56 T 18-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 SHALO_2083 d799eee31e483ff936e98d32e7913fec 227 Gene3D G3DSA:3.30.700.10 5 171 3.2E-7 T 18-10-2018 SHALO_2083 d799eee31e483ff936e98d32e7913fec 227 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 21 1.4E-4 T 18-10-2018 IPR012902 Prokaryotic N-terminal methylation site SHALO_2083 d799eee31e483ff936e98d32e7913fec 227 SUPERFAMILY SSF54523 5 104 4.32E-10 T 18-10-2018 SHALO_1971 ffe6198b0d4f89a5713d04316172c54a 390 SUPERFAMILY SSF51261 89 335 8.89E-59 T 18-10-2018 IPR011055 Duplicated hybrid motif SHALO_1971 ffe6198b0d4f89a5713d04316172c54a 390 Gene3D G3DSA:3.10.450.350 116 362 3.4E-92 T 18-10-2018 SHALO_1971 ffe6198b0d4f89a5713d04316172c54a 390 Pfam PF01551 Peptidase family M23 237 333 1.7E-30 T 18-10-2018 IPR016047 Peptidase M23 SHALO_1971 ffe6198b0d4f89a5713d04316172c54a 390 Gene3D G3DSA:2.70.70.10 208 340 3.4E-92 T 18-10-2018 IPR011055 Duplicated hybrid motif SHALO_2128 c6e7758255be57d02fb7b2c4d9ef8802 763 SUPERFAMILY SSF55073 343 494 1.26E-39 T 18-10-2018 IPR029787 Nucleotide cyclase SHALO_2128 c6e7758255be57d02fb7b2c4d9ef8802 763 SMART SM00267 327 494 1.9E-50 T 18-10-2018 IPR000160 GGDEF domain SHALO_2128 c6e7758255be57d02fb7b2c4d9ef8802 763 SMART SM00052 504 749 4.8E-110 T 18-10-2018 IPR001633 EAL domain SHALO_2128 c6e7758255be57d02fb7b2c4d9ef8802 763 Gene3D G3DSA:3.30.70.270 333 507 1.6E-47 T 18-10-2018 SHALO_2128 c6e7758255be57d02fb7b2c4d9ef8802 763 Gene3D G3DSA:3.20.20.450 508 758 1.1E-91 T 18-10-2018 IPR035919 EAL domain superfamily SHALO_2128 c6e7758255be57d02fb7b2c4d9ef8802 763 SUPERFAMILY SSF141868 509 757 4.58E-85 T 18-10-2018 IPR035919 EAL domain superfamily SHALO_2128 c6e7758255be57d02fb7b2c4d9ef8802 763 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 337 491 2.1E-34 T 18-10-2018 IPR000160 GGDEF domain SHALO_2128 c6e7758255be57d02fb7b2c4d9ef8802 763 Gene3D G3DSA:3.30.450.20 27 179 3.5E-7 T 18-10-2018 SHALO_2128 c6e7758255be57d02fb7b2c4d9ef8802 763 Pfam PF00990 Diguanylate cyclase, GGDEF domain 338 488 3.1E-38 T 18-10-2018 IPR000160 GGDEF domain SHALO_2128 c6e7758255be57d02fb7b2c4d9ef8802 763 Pfam PF00563 EAL domain 510 744 8.6E-72 T 18-10-2018 IPR001633 EAL domain SHALO_1834 80e6427f56f0edc84a209a1cb0d8467e 343 SUPERFAMILY SSF52172 1 149 6.26E-35 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_1834 80e6427f56f0edc84a209a1cb0d8467e 343 SUPERFAMILY SSF109604 152 321 1.81E-37 T 18-10-2018 SHALO_1834 80e6427f56f0edc84a209a1cb0d8467e 343 SMART SM00471 155 292 7.6E-9 T 18-10-2018 IPR003607 HD/PDEase domain SHALO_1834 80e6427f56f0edc84a209a1cb0d8467e 343 Pfam PF01966 HD domain 160 281 4.6E-21 T 18-10-2018 IPR006674 HD domain SHALO_1834 80e6427f56f0edc84a209a1cb0d8467e 343 Gene3D G3DSA:1.10.3210.10 134 330 4.9E-66 T 18-10-2018 SHALO_1834 80e6427f56f0edc84a209a1cb0d8467e 343 SMART SM00448 2 113 1.1E-31 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_1834 80e6427f56f0edc84a209a1cb0d8467e 343 Pfam PF00072 Response regulator receiver domain 4 113 2.5E-23 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_1834 80e6427f56f0edc84a209a1cb0d8467e 343 Gene3D G3DSA:3.40.50.2300 1 133 1.1E-32 T 18-10-2018 SHALO_1415 dea8ca809d616212851200dd7773ffc7 166 Pfam PF13420 Acetyltransferase (GNAT) domain 5 152 4.4E-19 T 18-10-2018 SHALO_1415 dea8ca809d616212851200dd7773ffc7 166 SUPERFAMILY SSF55729 4 163 9.61E-28 T 18-10-2018 IPR016181 Acyl-CoA N-acyltransferase SHALO_1415 dea8ca809d616212851200dd7773ffc7 166 Gene3D G3DSA:3.40.630.30 1 165 1.7E-36 T 18-10-2018 SHALO_0169 490525044db5ffcd9df6d64526cd3857 246 PIRSF PIRSF039085 2 245 1.4E-108 T 18-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 SHALO_0169 490525044db5ffcd9df6d64526cd3857 246 Pfam PF00005 ABC transporter 21 169 1.5E-37 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_0169 490525044db5ffcd9df6d64526cd3857 246 SMART SM00382 30 217 3.5E-14 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_0169 490525044db5ffcd9df6d64526cd3857 246 Gene3D G3DSA:3.40.50.300 1 245 3.0E-80 T 18-10-2018 SHALO_0169 490525044db5ffcd9df6d64526cd3857 246 SUPERFAMILY SSF52540 5 239 1.6E-79 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0169 490525044db5ffcd9df6d64526cd3857 246 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_1711 5d9a958fb7b7418f3408349111e961ab 579 Pfam PF11412 Disulphide bond corrector protein DsbC 24 138 4.7E-16 T 18-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain SHALO_1711 5d9a958fb7b7418f3408349111e961ab 579 Pfam PF13899 Thioredoxin-like 478 551 1.1E-11 T 18-10-2018 SHALO_1711 5d9a958fb7b7418f3408349111e961ab 579 SUPERFAMILY SSF74863 23 138 6.93E-20 T 18-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily SHALO_1711 5d9a958fb7b7418f3408349111e961ab 579 Gene3D G3DSA:3.40.30.10 457 577 6.1E-31 T 18-10-2018 SHALO_1711 5d9a958fb7b7418f3408349111e961ab 579 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 171 375 1.0E-18 T 18-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 SHALO_1711 5d9a958fb7b7418f3408349111e961ab 579 Gene3D G3DSA:2.60.40.1250 17 153 3.2E-19 T 18-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily SHALO_1711 5d9a958fb7b7418f3408349111e961ab 579 SUPERFAMILY SSF52833 467 576 1.21E-23 T 18-10-2018 IPR036249 Thioredoxin-like superfamily SHALO_0661 5cf17755100a7c45775c69b2d85cd959 123 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 1 123 1.1E-54 T 18-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 SHALO_0661 5cf17755100a7c45775c69b2d85cd959 123 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 99 117 - T 18-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 SHALO_0661 5cf17755100a7c45775c69b2d85cd959 123 SUPERFAMILY SSF55298 2 123 1.73E-49 T 18-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 SHALO_0661 5cf17755100a7c45775c69b2d85cd959 123 Pfam PF01042 Endoribonuclease L-PSP 7 122 3.0E-46 T 18-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 SHALO_0661 5cf17755100a7c45775c69b2d85cd959 123 Gene3D G3DSA:3.30.1330.40 1 123 2.3E-54 T 18-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 SHALO_2034 e8bebe30cecbaf4a376d88aab6da8d61 446 Gene3D G3DSA:1.20.120.140 5 299 2.3E-94 T 18-10-2018 SHALO_2034 e8bebe30cecbaf4a376d88aab6da8d61 446 SMART SM00382 93 237 1.4E-10 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_2034 e8bebe30cecbaf4a376d88aab6da8d61 446 Pfam PF00448 SRP54-type protein, GTPase domain 95 288 3.8E-70 T 18-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 SHALO_2034 e8bebe30cecbaf4a376d88aab6da8d61 446 SUPERFAMILY SSF47446 291 424 1.31E-42 T 18-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 SHALO_2034 e8bebe30cecbaf4a376d88aab6da8d61 446 SUPERFAMILY SSF47364 2 80 2.62E-9 T 18-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 SHALO_2034 e8bebe30cecbaf4a376d88aab6da8d61 446 Gene3D G3DSA:1.10.260.30 304 438 4.4E-39 T 18-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 SHALO_2034 e8bebe30cecbaf4a376d88aab6da8d61 446 TIGRFAM TIGR00959 ffh: signal recognition particle protein 3 423 8.5E-148 T 18-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 SHALO_2034 e8bebe30cecbaf4a376d88aab6da8d61 446 SUPERFAMILY SSF52540 88 291 2.23E-49 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_2034 e8bebe30cecbaf4a376d88aab6da8d61 446 Gene3D G3DSA:3.40.50.300 86 278 2.3E-94 T 18-10-2018 SHALO_2034 e8bebe30cecbaf4a376d88aab6da8d61 446 SMART SM00962 94 289 1.3E-100 T 18-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 SHALO_2034 e8bebe30cecbaf4a376d88aab6da8d61 446 SMART SM00963 1 79 3.2E-4 T 18-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 SHALO_2034 e8bebe30cecbaf4a376d88aab6da8d61 446 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 262 275 - T 18-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 SHALO_2034 e8bebe30cecbaf4a376d88aab6da8d61 446 Pfam PF02881 SRP54-type protein, helical bundle domain 5 58 3.7E-7 T 18-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 SHALO_2034 e8bebe30cecbaf4a376d88aab6da8d61 446 Pfam PF02978 Signal peptide binding domain 320 420 7.5E-31 T 18-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 SHALO_0111 afdd127c2b7934a31885c8164aa0878f 92 Gene3D G3DSA:3.40.1690.10 8 88 1.8E-26 T 18-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal SHALO_0111 afdd127c2b7934a31885c8164aa0878f 92 Pfam PF01312 FlhB HrpN YscU SpaS Family 11 83 1.9E-19 T 18-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 SHALO_0111 afdd127c2b7934a31885c8164aa0878f 92 SUPERFAMILY SSF160544 9 86 2.62E-23 T 18-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal SHALO_2681 1a614b0ddb3690b1bd89965364f9a301 280 Gene3D G3DSA:2.60.120.10 15 108 1.5E-7 T 18-10-2018 IPR014710 RmlC-like jelly roll fold SHALO_2681 1a614b0ddb3690b1bd89965364f9a301 280 SUPERFAMILY SSF51215 31 164 9.55E-15 T 18-10-2018 IPR037923 Transcription regulator HTH-like SHALO_2681 1a614b0ddb3690b1bd89965364f9a301 280 Pfam PF02311 AraC-like ligand binding domain 41 137 9.8E-8 T 18-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 SHALO_2681 1a614b0ddb3690b1bd89965364f9a301 280 Pfam PF12833 Helix-turn-helix domain 199 278 3.9E-17 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_2681 1a614b0ddb3690b1bd89965364f9a301 280 Gene3D G3DSA:1.10.10.60 175 279 9.4E-20 T 18-10-2018 SHALO_2681 1a614b0ddb3690b1bd89965364f9a301 280 SMART SM00342 192 276 3.6E-13 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_2681 1a614b0ddb3690b1bd89965364f9a301 280 SUPERFAMILY SSF46689 233 278 8.06E-12 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SHALO_1049 015b28e20dd677d8af00f58ff6a38641 96 Gene3D G3DSA:1.10.260.40 1 94 1.1E-25 T 18-10-2018 SHALO_1049 015b28e20dd677d8af00f58ff6a38641 96 Pfam PF01381 Helix-turn-helix 20 66 7.0E-6 T 18-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SHALO_1049 015b28e20dd677d8af00f58ff6a38641 96 SMART SM00530 12 68 0.0038 T 18-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SHALO_1049 015b28e20dd677d8af00f58ff6a38641 96 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 3 81 1.4E-26 T 18-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 SHALO_1049 015b28e20dd677d8af00f58ff6a38641 96 SUPERFAMILY SSF47413 8 86 7.51E-20 T 18-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 SHALO_0621 d2e337ccb96cb39a922b94253129fce8 96 Gene3D G3DSA:3.30.460.10 6 94 3.6E-24 T 18-10-2018 SHALO_0621 d2e337ccb96cb39a922b94253129fce8 96 Pfam PF01909 Nucleotidyltransferase domain 13 94 1.7E-12 T 18-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 SHALO_0621 d2e337ccb96cb39a922b94253129fce8 96 SUPERFAMILY SSF81301 2 94 1.05E-20 T 18-10-2018 SHALO_1497 a8a7b2ee8848785dc43e7eb768321e40 138 SUPERFAMILY SSF82649 15 129 3.92E-16 T 18-10-2018 SHALO_1497 a8a7b2ee8848785dc43e7eb768321e40 138 Pfam PF01592 NifU-like N terminal domain 15 130 7.0E-9 T 18-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 SHALO_1497 a8a7b2ee8848785dc43e7eb768321e40 138 Gene3D G3DSA:3.90.1010.10 12 137 6.5E-15 T 18-10-2018 SHALO_2269 3b308671c709604b774e2fa9133619e2 623 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 270 284 - T 18-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 SHALO_2269 3b308671c709604b774e2fa9133619e2 623 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 1 620 40.249 T 18-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 SHALO_2269 3b308671c709604b774e2fa9133619e2 623 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 9.4E-5 T 18-10-2018 SHALO_2269 3b308671c709604b774e2fa9133619e2 623 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 144 162 9.4E-5 T 18-10-2018 SHALO_2269 3b308671c709604b774e2fa9133619e2 623 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 365 388 - T 18-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 SHALO_2269 3b308671c709604b774e2fa9133619e2 623 Gene3D G3DSA:1.10.10.1800 456 546 1.7E-10 T 18-10-2018 SHALO_2269 3b308671c709604b774e2fa9133619e2 623 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 9.5E-6 T 18-10-2018 SHALO_2269 3b308671c709604b774e2fa9133619e2 623 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 156 9.5E-6 T 18-10-2018 SHALO_2269 3b308671c709604b774e2fa9133619e2 623 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 3 617 2.0E-268 T 18-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 SHALO_2269 3b308671c709604b774e2fa9133619e2 623 SUPERFAMILY SSF51905 1 258 6.02E-44 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SHALO_2269 3b308671c709604b774e2fa9133619e2 623 Pfam PF13932 GidA associated domain 398 611 5.1E-72 T 18-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 SHALO_2269 3b308671c709604b774e2fa9133619e2 623 Gene3D G3DSA:3.50.50.60 301 455 4.9E-60 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SHALO_2269 3b308671c709604b774e2fa9133619e2 623 Gene3D G3DSA:3.50.50.60 1 216 2.6E-81 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SHALO_2269 3b308671c709604b774e2fa9133619e2 623 Gene3D G3DSA:1.10.150.570 565 617 9.9E-19 T 18-10-2018 SHALO_2269 3b308671c709604b774e2fa9133619e2 623 SMART SM01228 542 613 1.0E-32 T 18-10-2018 SHALO_2269 3b308671c709604b774e2fa9133619e2 623 Pfam PF01134 Glucose inhibited division protein A 4 395 7.6E-159 T 18-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 SHALO_2823 24cc21155c8e0c1855504de3b974e8ca 568 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_2823 24cc21155c8e0c1855504de3b974e8ca 568 SUPERFAMILY SSF52540 324 545 6.52E-61 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_2823 24cc21155c8e0c1855504de3b974e8ca 568 Gene3D G3DSA:3.40.50.300 2 249 1.2E-58 T 18-10-2018 SHALO_2823 24cc21155c8e0c1855504de3b974e8ca 568 Pfam PF00005 ABC transporter 341 484 4.0E-25 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_2823 24cc21155c8e0c1855504de3b974e8ca 568 Pfam PF00005 ABC transporter 21 161 1.1E-30 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_2823 24cc21155c8e0c1855504de3b974e8ca 568 SMART SM00382 30 256 7.1E-10 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_2823 24cc21155c8e0c1855504de3b974e8ca 568 SMART SM00382 349 539 3.6E-13 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_2823 24cc21155c8e0c1855504de3b974e8ca 568 SUPERFAMILY SSF52540 6 222 1.78E-54 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_2823 24cc21155c8e0c1855504de3b974e8ca 568 Gene3D G3DSA:3.40.50.300 312 561 1.8E-64 T 18-10-2018 SHALO_1317 8042bb1c1359495cf13f01c987674a75 225 Gene3D G3DSA:1.10.1060.20 98 209 7.3E-13 T 18-10-2018 SHALO_1317 8042bb1c1359495cf13f01c987674a75 225 Gene3D G3DSA:3.10.20.30 1 97 6.9E-27 T 18-10-2018 IPR012675 Beta-grasp domain superfamily SHALO_0585 da57b1cc5bec96e56650e6ffb83fcf22 436 SMART SM00729 135 352 6.1E-41 T 18-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 SHALO_0585 da57b1cc5bec96e56650e6ffb83fcf22 436 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 3 427 2.7E-116 T 18-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 SHALO_0585 da57b1cc5bec96e56650e6ffb83fcf22 436 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 2 432 54.414 T 18-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 SHALO_0585 da57b1cc5bec96e56650e6ffb83fcf22 436 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 3 390 5.9E-100 T 18-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 SHALO_0585 da57b1cc5bec96e56650e6ffb83fcf22 436 Gene3D G3DSA:3.80.30.20 133 365 1.1E-64 T 18-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe SHALO_0585 da57b1cc5bec96e56650e6ffb83fcf22 436 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 139 159 - T 18-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 SHALO_0585 da57b1cc5bec96e56650e6ffb83fcf22 436 Pfam PF04055 Radical SAM superfamily 141 309 8.3E-22 T 18-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 SHALO_0585 da57b1cc5bec96e56650e6ffb83fcf22 436 SUPERFAMILY SSF102114 114 355 3.27E-48 T 18-10-2018 SHALO_0585 da57b1cc5bec96e56650e6ffb83fcf22 436 Pfam PF00919 Uncharacterized protein family UPF0004 3 98 4.9E-25 T 18-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 SHALO_0585 da57b1cc5bec96e56650e6ffb83fcf22 436 Gene3D G3DSA:2.40.50.140 367 435 1.1E-5 T 18-10-2018 SHALO_0585 da57b1cc5bec96e56650e6ffb83fcf22 436 Gene3D G3DSA:3.40.50.12160 2 131 5.8E-38 T 18-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily SHALO_0955 551945480121c1f5f13ac7feb104d013 117 Hamap MF_02200 Chaperone NapD [napD]. 1 78 16.891 T 18-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly SHALO_0955 551945480121c1f5f13ac7feb104d013 117 Pfam PF03927 NapD protein 1 77 9.5E-22 T 18-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly SHALO_0955 551945480121c1f5f13ac7feb104d013 117 Gene3D G3DSA:3.30.70.920 1 71 1.3E-12 T 18-10-2018 SHALO_1815 d7afc96382be3667cd98407afaa92f00 733 Gene3D G3DSA:3.30.1330.10 390 561 1.7E-53 T 18-10-2018 IPR036921 PurM-like, N-terminal domain superfamily SHALO_1815 d7afc96382be3667cd98407afaa92f00 733 SUPERFAMILY SSF55326 10 196 1.79E-48 T 18-10-2018 IPR036921 PurM-like, N-terminal domain superfamily SHALO_1815 d7afc96382be3667cd98407afaa92f00 733 SUPERFAMILY SSF56042 568 717 8.67E-23 T 18-10-2018 IPR036676 PurM-like, C-terminal domain superfamily SHALO_1815 d7afc96382be3667cd98407afaa92f00 733 Pfam PF00586 AIR synthase related protein, N-terminal domain 82 188 3.5E-22 T 18-10-2018 IPR016188 PurM-like, N-terminal domain SHALO_1815 d7afc96382be3667cd98407afaa92f00 733 Pfam PF00586 AIR synthase related protein, N-terminal domain 454 557 4.4E-19 T 18-10-2018 IPR016188 PurM-like, N-terminal domain SHALO_1815 d7afc96382be3667cd98407afaa92f00 733 Gene3D G3DSA:3.30.1330.10 39 193 1.2E-131 T 18-10-2018 IPR036921 PurM-like, N-terminal domain superfamily SHALO_1815 d7afc96382be3667cd98407afaa92f00 733 SUPERFAMILY SSF56042 201 425 2.24E-50 T 18-10-2018 IPR036676 PurM-like, C-terminal domain superfamily SHALO_1815 d7afc96382be3667cd98407afaa92f00 733 TIGRFAM TIGR01736 FGAM_synth_II: phosphoribosylformylglycinamidine synthase II 13 728 2.6E-289 T 18-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 SHALO_1815 d7afc96382be3667cd98407afaa92f00 733 Gene3D G3DSA:3.90.650.10 566 731 8.4E-25 T 18-10-2018 IPR036676 PurM-like, C-terminal domain superfamily SHALO_1815 d7afc96382be3667cd98407afaa92f00 733 Hamap MF_00420 Phosphoribosylformylglycinamidine synthase subunit PurL [purL]. 1 733 297.61 T 18-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 SHALO_1815 d7afc96382be3667cd98407afaa92f00 733 PIRSF PIRSF001587 1 732 5.1E-303 T 18-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 SHALO_1815 d7afc96382be3667cd98407afaa92f00 733 SUPERFAMILY SSF55326 396 565 1.7E-50 T 18-10-2018 IPR036921 PurM-like, N-terminal domain superfamily SHALO_1815 d7afc96382be3667cd98407afaa92f00 733 Pfam PF02769 AIR synthase related protein, C-terminal domain 203 354 1.9E-30 T 18-10-2018 IPR010918 PurM-like, C-terminal domain SHALO_1815 d7afc96382be3667cd98407afaa92f00 733 Gene3D G3DSA:3.90.650.10 25 366 1.2E-131 T 18-10-2018 IPR036676 PurM-like, C-terminal domain superfamily SHALO_2103 e79a8ceb5294ac0fd56b061b707cfb0f 1023 SMART SM00448 563 677 2.5E-20 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_2103 e79a8ceb5294ac0fd56b061b707cfb0f 1023 SMART SM00448 706 819 4.7E-37 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_2103 e79a8ceb5294ac0fd56b061b707cfb0f 1023 PRINTS PR00344 Bacterial sensor protein C-terminal signature 472 486 3.2E-12 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_2103 e79a8ceb5294ac0fd56b061b707cfb0f 1023 PRINTS PR00344 Bacterial sensor protein C-terminal signature 507 525 3.2E-12 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_2103 e79a8ceb5294ac0fd56b061b707cfb0f 1023 PRINTS PR00344 Bacterial sensor protein C-terminal signature 531 544 3.2E-12 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_2103 e79a8ceb5294ac0fd56b061b707cfb0f 1023 Pfam PF00072 Response regulator receiver domain 708 819 7.3E-26 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_2103 e79a8ceb5294ac0fd56b061b707cfb0f 1023 Pfam PF00072 Response regulator receiver domain 565 676 3.9E-16 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_2103 e79a8ceb5294ac0fd56b061b707cfb0f 1023 Gene3D G3DSA:3.40.50.2300 562 692 4.1E-24 T 18-10-2018 SHALO_2103 e79a8ceb5294ac0fd56b061b707cfb0f 1023 SUPERFAMILY SSF47226 802 921 7.46E-15 T 18-10-2018 IPR036641 HPT domain superfamily GO:0000160 SHALO_2103 e79a8ceb5294ac0fd56b061b707cfb0f 1023 Gene3D G3DSA:1.20.120.160 839 951 7.2E-14 T 18-10-2018 IPR036641 HPT domain superfamily GO:0000160 SHALO_2103 e79a8ceb5294ac0fd56b061b707cfb0f 1023 SUPERFAMILY SSF47384 303 385 1.29E-21 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SHALO_2103 e79a8ceb5294ac0fd56b061b707cfb0f 1023 Gene3D G3DSA:3.40.190.10 112 207 6.3E-35 T 18-10-2018 SHALO_2103 e79a8ceb5294ac0fd56b061b707cfb0f 1023 SUPERFAMILY SSF52172 704 827 3.27E-37 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_2103 e79a8ceb5294ac0fd56b061b707cfb0f 1023 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 35 244 7.1E-19 T 18-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SHALO_2103 e79a8ceb5294ac0fd56b061b707cfb0f 1023 SUPERFAMILY SSF52172 563 693 9.39E-26 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_2103 e79a8ceb5294ac0fd56b061b707cfb0f 1023 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 431 545 4.4E-27 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_2103 e79a8ceb5294ac0fd56b061b707cfb0f 1023 SMART SM00062 29 247 7.7E-8 T 18-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SHALO_2103 e79a8ceb5294ac0fd56b061b707cfb0f 1023 Gene3D G3DSA:1.10.287.130 283 382 3.2E-28 T 18-10-2018 SHALO_2103 e79a8ceb5294ac0fd56b061b707cfb0f 1023 SUPERFAMILY SSF53850 35 247 8.36E-28 T 18-10-2018 SHALO_2103 e79a8ceb5294ac0fd56b061b707cfb0f 1023 SMART SM00388 319 384 1.4E-24 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_2103 e79a8ceb5294ac0fd56b061b707cfb0f 1023 SMART SM00387 431 547 6.8E-35 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_2103 e79a8ceb5294ac0fd56b061b707cfb0f 1023 Gene3D G3DSA:3.30.565.10 385 551 5.7E-47 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_2103 e79a8ceb5294ac0fd56b061b707cfb0f 1023 Pfam PF00512 His Kinase A (phospho-acceptor) domain 319 383 2.4E-19 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_2103 e79a8ceb5294ac0fd56b061b707cfb0f 1023 Gene3D G3DSA:3.40.190.10 25 242 6.3E-35 T 18-10-2018 SHALO_2103 e79a8ceb5294ac0fd56b061b707cfb0f 1023 Pfam PF01627 Hpt domain 880 936 2.7E-9 T 18-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 SHALO_2103 e79a8ceb5294ac0fd56b061b707cfb0f 1023 Gene3D G3DSA:3.40.50.2300 693 825 3.2E-40 T 18-10-2018 SHALO_2103 e79a8ceb5294ac0fd56b061b707cfb0f 1023 SUPERFAMILY SSF55874 373 549 2.23E-43 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_2103 e79a8ceb5294ac0fd56b061b707cfb0f 1023 SMART SM00073 856 947 0.0076 T 18-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 SHALO_0651 d23396b661a6e3f99f617ed251702c52 482 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 7 481 83.362 T 18-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 SHALO_0651 d23396b661a6e3f99f617ed251702c52 482 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 290 302 - T 18-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 SHALO_0651 d23396b661a6e3f99f617ed251702c52 482 Gene3D G3DSA:3.20.20.70 1 481 1.6E-214 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_0651 d23396b661a6e3f99f617ed251702c52 482 Pfam PF00571 CBS domain 95 139 6.4E-11 T 18-10-2018 IPR000644 CBS domain SHALO_0651 d23396b661a6e3f99f617ed251702c52 482 Pfam PF00571 CBS domain 148 201 1.3E-10 T 18-10-2018 IPR000644 CBS domain SHALO_0651 d23396b661a6e3f99f617ed251702c52 482 SMART SM00116 95 143 7.4E-10 T 18-10-2018 IPR000644 CBS domain SHALO_0651 d23396b661a6e3f99f617ed251702c52 482 SMART SM00116 156 204 3.1E-10 T 18-10-2018 IPR000644 CBS domain SHALO_0651 d23396b661a6e3f99f617ed251702c52 482 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 7 448 2.2E-188 T 18-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 SHALO_0651 d23396b661a6e3f99f617ed251702c52 482 SUPERFAMILY SSF54631 73 201 3.66E-32 T 18-10-2018 SHALO_0651 d23396b661a6e3f99f617ed251702c52 482 SMART SM01240 6 468 0.0 T 18-10-2018 SHALO_0651 d23396b661a6e3f99f617ed251702c52 482 SUPERFAMILY SSF51412 2 472 1.23E-122 T 18-10-2018 SHALO_0651 d23396b661a6e3f99f617ed251702c52 482 PIRSF PIRSF000130 1 482 1.3E-206 T 18-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 SHALO_0651 d23396b661a6e3f99f617ed251702c52 482 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 7 468 4.4E-161 T 18-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 SHALO_2291 a82863630bafab11b8c91c82561ffdbf 1007 Pfam PF01568 Molydopterin dinucleotide binding domain 877 974 9.5E-10 T 18-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 SHALO_2291 a82863630bafab11b8c91c82561ffdbf 1007 SUPERFAMILY SSF53706 68 837 3.38E-103 T 18-10-2018 SHALO_2291 a82863630bafab11b8c91c82561ffdbf 1007 SMART SM00926 67 151 2.0E-7 T 18-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_2291 a82863630bafab11b8c91c82561ffdbf 1007 Gene3D G3DSA:3.40.228.10 252 562 3.5E-42 T 18-10-2018 SHALO_2291 a82863630bafab11b8c91c82561ffdbf 1007 Gene3D G3DSA:3.40.50.740 585 687 6.0E-10 T 18-10-2018 SHALO_2291 a82863630bafab11b8c91c82561ffdbf 1007 SUPERFAMILY SSF50692 874 1007 4.07E-15 T 18-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily SHALO_2291 a82863630bafab11b8c91c82561ffdbf 1007 Pfam PF00384 Molybdopterin oxidoreductase 213 672 2.8E-13 T 18-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_2291 a82863630bafab11b8c91c82561ffdbf 1007 Gene3D G3DSA:2.40.40.20 838 973 4.6E-16 T 18-10-2018 SHALO_2585 dca5c153b02994bade42e67fcf99e976 439 Gene3D G3DSA:3.40.50.11900 280 437 1.3E-44 T 18-10-2018 SHALO_2585 dca5c153b02994bade42e67fcf99e976 439 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 78 426 5.5E-82 T 18-10-2018 IPR010327 FldB/FldC dehydratase alpha/beta subunit SHALO_2585 dca5c153b02994bade42e67fcf99e976 439 Gene3D G3DSA:3.40.50.11890 71 196 2.5E-28 T 18-10-2018 SHALO_2585 dca5c153b02994bade42e67fcf99e976 439 Gene3D G3DSA:1.20.1270.370 55 263 2.5E-28 T 18-10-2018 SHALO_1749 1441037ec3fb72ee42f08bc4d2abe2f1 325 Gene3D G3DSA:3.30.30.80 1 54 9.0E-15 T 18-10-2018 IPR038247 Jag, N-terminal domain superfamily SHALO_1749 1441037ec3fb72ee42f08bc4d2abe2f1 325 Gene3D G3DSA:3.30.300.20 172 251 2.9E-33 T 18-10-2018 IPR015946 K homology domain-like, alpha/beta SHALO_1749 1441037ec3fb72ee42f08bc4d2abe2f1 325 Pfam PF14804 Jag N-terminus 4 52 5.9E-15 T 18-10-2018 IPR032782 Jag, N-terminal SHALO_1749 1441037ec3fb72ee42f08bc4d2abe2f1 325 Gene3D G3DSA:3.30.1370.180 252 323 2.8E-33 T 18-10-2018 SHALO_1749 1441037ec3fb72ee42f08bc4d2abe2f1 325 SMART SM01245 3 54 4.3E-19 T 18-10-2018 IPR032782 Jag, N-terminal SHALO_1084 fd74ae116b955fbfc1eee397009f161f 605 Gene3D G3DSA:2.60.120.10 7 141 8.3E-17 T 18-10-2018 IPR014710 RmlC-like jelly roll fold SHALO_1084 fd74ae116b955fbfc1eee397009f161f 605 SUPERFAMILY SSF51206 3 130 2.75E-16 T 18-10-2018 IPR018490 Cyclic nucleotide-binding-like SHALO_1084 fd74ae116b955fbfc1eee397009f161f 605 SUPERFAMILY SSF54631 146 271 8.46E-21 T 18-10-2018 SHALO_1084 fd74ae116b955fbfc1eee397009f161f 605 SMART SM00100 15 130 0.0045 T 18-10-2018 IPR000595 Cyclic nucleotide-binding domain SHALO_1084 fd74ae116b955fbfc1eee397009f161f 605 Pfam PF00571 CBS domain 220 269 6.0E-6 T 18-10-2018 IPR000644 CBS domain SHALO_1084 fd74ae116b955fbfc1eee397009f161f 605 Pfam PF03445 Putative nucleotidyltransferase DUF294 297 423 4.0E-37 T 18-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 SHALO_1084 fd74ae116b955fbfc1eee397009f161f 605 Gene3D G3DSA:3.10.580.10 142 317 3.7E-19 T 18-10-2018 SHALO_1084 fd74ae116b955fbfc1eee397009f161f 605 SMART SM00116 157 205 29.0 T 18-10-2018 IPR000644 CBS domain SHALO_1084 fd74ae116b955fbfc1eee397009f161f 605 SMART SM00116 222 269 0.002 T 18-10-2018 IPR000644 CBS domain SHALO_1084 fd74ae116b955fbfc1eee397009f161f 605 Pfam PF00027 Cyclic nucleotide-binding domain 35 115 4.7E-7 T 18-10-2018 IPR000595 Cyclic nucleotide-binding domain SHALO_1084 fd74ae116b955fbfc1eee397009f161f 605 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 462 599 1.6E-39 T 18-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding SHALO_2416 16e9ef8b2acfe049cad279e261407cbe 252 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 250 2.1E-91 T 18-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 SHALO_2416 16e9ef8b2acfe049cad279e261407cbe 252 SUPERFAMILY SSF55920 3 251 6.28E-73 T 18-10-2018 IPR036005 Creatinase/aminopeptidase-like SHALO_2416 16e9ef8b2acfe049cad279e261407cbe 252 Gene3D G3DSA:3.90.230.10 1 252 7.8E-85 T 18-10-2018 SHALO_2416 16e9ef8b2acfe049cad279e261407cbe 252 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 166 184 - T 18-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 SHALO_2416 16e9ef8b2acfe049cad279e261407cbe 252 Hamap MF_01974 Methionine aminopeptidase [map]. 3 252 34.686 T 18-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 SHALO_2416 16e9ef8b2acfe049cad279e261407cbe 252 PRINTS PR00599 Methionine aminopeptidase-1 signature 68 81 5.7E-21 T 18-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 SHALO_2416 16e9ef8b2acfe049cad279e261407cbe 252 PRINTS PR00599 Methionine aminopeptidase-1 signature 90 106 5.7E-21 T 18-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 SHALO_2416 16e9ef8b2acfe049cad279e261407cbe 252 PRINTS PR00599 Methionine aminopeptidase-1 signature 160 172 5.7E-21 T 18-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 SHALO_2416 16e9ef8b2acfe049cad279e261407cbe 252 PRINTS PR00599 Methionine aminopeptidase-1 signature 194 206 5.7E-21 T 18-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 SHALO_2416 16e9ef8b2acfe049cad279e261407cbe 252 Pfam PF00557 Metallopeptidase family M24 13 241 2.1E-45 T 18-10-2018 IPR000994 Peptidase M24 SHALO_0714 9cf29d3e3e2d2d94616d029b76b3bf47 182 Gene3D G3DSA:3.40.630.30 14 166 1.9E-9 T 18-10-2018 SHALO_0714 9cf29d3e3e2d2d94616d029b76b3bf47 182 Pfam PF00583 Acetyltransferase (GNAT) family 53 145 6.5E-6 T 18-10-2018 IPR000182 GNAT domain SHALO_0714 9cf29d3e3e2d2d94616d029b76b3bf47 182 SUPERFAMILY SSF55729 9 156 5.12E-11 T 18-10-2018 IPR016181 Acyl-CoA N-acyltransferase SHALO_2689 968e21985dff535761dd689f0ee6f370 543 Gene3D G3DSA:1.10.287.130 274 363 2.9E-8 T 18-10-2018 SHALO_2689 968e21985dff535761dd689f0ee6f370 543 Gene3D G3DSA:3.30.565.10 367 529 1.1E-30 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_2689 968e21985dff535761dd689f0ee6f370 543 SUPERFAMILY SSF47384 292 363 1.0E-5 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SHALO_2689 968e21985dff535761dd689f0ee6f370 543 PRINTS PR00344 Bacterial sensor protein C-terminal signature 449 463 6.8E-8 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_2689 968e21985dff535761dd689f0ee6f370 543 PRINTS PR00344 Bacterial sensor protein C-terminal signature 480 498 6.8E-8 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_2689 968e21985dff535761dd689f0ee6f370 543 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 477 6.8E-8 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_2689 968e21985dff535761dd689f0ee6f370 543 SUPERFAMILY SSF55874 367 527 2.75E-28 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_2689 968e21985dff535761dd689f0ee6f370 543 SMART SM00387 407 529 4.6E-16 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_2689 968e21985dff535761dd689f0ee6f370 543 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 410 509 2.7E-16 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_2039 a906e0ccc38651522d656495b1e0ec7a 285 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 108 132 9.4E-69 T 18-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SHALO_2039 a906e0ccc38651522d656495b1e0ec7a 285 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 56 71 9.4E-69 T 18-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SHALO_2039 a906e0ccc38651522d656495b1e0ec7a 285 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 157 172 9.4E-69 T 18-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SHALO_2039 a906e0ccc38651522d656495b1e0ec7a 285 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 246 262 9.4E-69 T 18-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SHALO_2039 a906e0ccc38651522d656495b1e0ec7a 285 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 134 154 9.4E-69 T 18-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SHALO_2039 a906e0ccc38651522d656495b1e0ec7a 285 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 77 97 9.4E-69 T 18-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SHALO_2039 a906e0ccc38651522d656495b1e0ec7a 285 Gene3D G3DSA:3.30.930.10 1 209 8.9E-109 T 18-10-2018 SHALO_2039 a906e0ccc38651522d656495b1e0ec7a 285 Gene3D G3DSA:1.20.58.180 210 284 8.2E-34 T 18-10-2018 SHALO_2039 a906e0ccc38651522d656495b1e0ec7a 285 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 2 283 57.472 T 18-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SHALO_2039 a906e0ccc38651522d656495b1e0ec7a 285 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 3 282 8.8E-156 T 18-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SHALO_2039 a906e0ccc38651522d656495b1e0ec7a 285 SUPERFAMILY SSF55681 3 282 2.46E-127 T 18-10-2018 SHALO_2039 a906e0ccc38651522d656495b1e0ec7a 285 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 4 282 7.4E-145 T 18-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SHALO_1524 acd85e18156f0b9873fc31a107900b90 254 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 7 21 - T 18-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 SHALO_1524 acd85e18156f0b9873fc31a107900b90 254 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 3 208 1.3E-47 T 18-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 SHALO_1524 acd85e18156f0b9873fc31a107900b90 254 SUPERFAMILY SSF53790 1 248 1.44E-67 T 18-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 SHALO_1524 acd85e18156f0b9873fc31a107900b90 254 TIGRFAM TIGR01465 cobM_cbiF: precorrin-4 C11-methyltransferase 4 248 3.1E-105 T 18-10-2018 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase GO:0009236|GO:0046026 SHALO_1524 acd85e18156f0b9873fc31a107900b90 254 Gene3D G3DSA:3.40.1010.10 1 111 2.3E-31 T 18-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 SHALO_1524 acd85e18156f0b9873fc31a107900b90 254 Gene3D G3DSA:3.30.950.10 112 230 1.3E-48 T 18-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 SHALO_0108 f63397b5e2247809530b45f0523b391b 266 Gene3D G3DSA:3.30.70.580 64 233 1.5E-36 T 18-10-2018 SHALO_0108 f63397b5e2247809530b45f0523b391b 266 SUPERFAMILY SSF55174 1 54 3.2E-13 T 18-10-2018 SHALO_0108 f63397b5e2247809530b45f0523b391b 266 SUPERFAMILY SSF55120 61 253 1.26E-28 T 18-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHALO_0108 f63397b5e2247809530b45f0523b391b 266 SMART SM00363 1 58 2.3E-10 T 18-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_0108 f63397b5e2247809530b45f0523b391b 266 Pfam PF01479 S4 domain 1 44 9.8E-9 T 18-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_0108 f63397b5e2247809530b45f0523b391b 266 Gene3D G3DSA:3.10.290.10 1 61 1.1E-17 T 18-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 SHALO_0108 f63397b5e2247809530b45f0523b391b 266 Gene3D G3DSA:3.30.70.1560 123 225 1.5E-36 T 18-10-2018 SHALO_0108 f63397b5e2247809530b45f0523b391b 266 Pfam PF00849 RNA pseudouridylate synthase 62 204 7.2E-11 T 18-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHALO_0108 f63397b5e2247809530b45f0523b391b 266 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 236 3.1E-38 T 18-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 SHALO_0303 1c06fe66fdd40db424b5013f2586dd12 331 SUPERFAMILY SSF46626 185 283 1.86E-18 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_0303 1c06fe66fdd40db424b5013f2586dd12 331 Gene3D G3DSA:1.10.760.10 38 175 8.0E-39 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_0303 1c06fe66fdd40db424b5013f2586dd12 331 SUPERFAMILY SSF46626 57 170 6.36E-22 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_0303 1c06fe66fdd40db424b5013f2586dd12 331 Pfam PF00034 Cytochrome c 194 279 2.3E-9 T 18-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_0303 1c06fe66fdd40db424b5013f2586dd12 331 Gene3D G3DSA:1.10.760.10 181 298 9.0E-36 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_2290 cf53a3addde14ef69f852c5faf0cd398 334 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 331 5.9E-132 T 18-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 SHALO_2290 cf53a3addde14ef69f852c5faf0cd398 334 Gene3D G3DSA:3.40.50.720 3 270 2.9E-140 T 18-10-2018 SHALO_2290 cf53a3addde14ef69f852c5faf0cd398 334 Gene3D G3DSA:3.90.25.10 191 325 2.9E-140 T 18-10-2018 SHALO_2290 cf53a3addde14ef69f852c5faf0cd398 334 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 321 1.2E-57 T 18-10-2018 IPR016040 NAD(P)-binding domain SHALO_2290 cf53a3addde14ef69f852c5faf0cd398 334 SUPERFAMILY SSF51735 1 332 9.13E-97 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_2087 bc01a31fda7a2c34d35c2e05f76dc920 711 SMART SM00563 30 140 9.4E-30 T 18-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 SHALO_2087 bc01a31fda7a2c34d35c2e05f76dc920 711 Gene3D G3DSA:3.40.50.12780 195 610 5.8E-75 T 18-10-2018 SHALO_2087 bc01a31fda7a2c34d35c2e05f76dc920 711 Pfam PF00501 AMP-binding enzyme 213 615 1.1E-64 T 18-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 SHALO_2087 bc01a31fda7a2c34d35c2e05f76dc920 711 Gene3D G3DSA:3.30.300.30 612 710 2.1E-7 T 18-10-2018 SHALO_2087 bc01a31fda7a2c34d35c2e05f76dc920 711 SUPERFAMILY SSF69593 8 180 2.22E-27 T 18-10-2018 SHALO_2087 bc01a31fda7a2c34d35c2e05f76dc920 711 SUPERFAMILY SSF56801 202 708 1.83E-89 T 18-10-2018 SHALO_2087 bc01a31fda7a2c34d35c2e05f76dc920 711 ProSitePatterns PS00455 Putative AMP-binding domain signature. 371 382 - T 18-10-2018 IPR020845 AMP-binding, conserved site SHALO_2087 bc01a31fda7a2c34d35c2e05f76dc920 711 Pfam PF01553 Acyltransferase 15 137 3.8E-20 T 18-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 SHALO_0721 44f661cd3c25e5240e75220ef386efe7 940 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 2 915 0.0 T 18-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 SHALO_0721 44f661cd3c25e5240e75220ef386efe7 940 SUPERFAMILY SSF52540 4 563 8.44E-47 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0721 44f661cd3c25e5240e75220ef386efe7 940 Gene3D G3DSA:1.20.1580.10 682 820 3.8E-134 T 18-10-2018 SHALO_0721 44f661cd3c25e5240e75220ef386efe7 940 Gene3D G3DSA:1.20.1580.10 88 486 3.2E-223 T 18-10-2018 SHALO_0721 44f661cd3c25e5240e75220ef386efe7 940 Gene3D G3DSA:3.40.50.300 607 929 3.8E-134 T 18-10-2018 SHALO_0721 44f661cd3c25e5240e75220ef386efe7 940 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_0721 44f661cd3c25e5240e75220ef386efe7 940 Gene3D G3DSA:3.40.50.300 4 587 3.2E-223 T 18-10-2018 SHALO_0721 44f661cd3c25e5240e75220ef386efe7 940 Gene3D G3DSA:1.10.8.280 289 393 3.2E-223 T 18-10-2018 SHALO_0721 44f661cd3c25e5240e75220ef386efe7 940 SUPERFAMILY SSF52540 611 903 5.82E-48 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0721 44f661cd3c25e5240e75220ef386efe7 940 ProSitePatterns PS00211 ABC transporters family signature. 820 834 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_0721 44f661cd3c25e5240e75220ef386efe7 940 Gene3D G3DSA:3.30.190.20 128 237 3.2E-223 T 18-10-2018 SHALO_0721 44f661cd3c25e5240e75220ef386efe7 940 Pfam PF00005 ABC transporter 614 850 1.9E-9 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_1449 d6b93602dc49c1d9a42029398be67f4e 74 Gene3D G3DSA:3.40.1620.40 6 61 7.7E-6 T 18-10-2018 SHALO_1449 d6b93602dc49c1d9a42029398be67f4e 74 SUPERFAMILY SSF143120 7 67 3.01E-9 T 18-10-2018 IPR036165 YefM-like superfamily SHALO_1449 d6b93602dc49c1d9a42029398be67f4e 74 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 9 69 3.5E-7 T 18-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM SHALO_1751 83c5c257de55425bb731877aa52527e2 112 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 6 73 1.3E-22 T 18-10-2018 IPR002696 Putative membrane protein insertion efficiency factor SHALO_1751 83c5c257de55425bb731877aa52527e2 112 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 1 69 17.99 T 18-10-2018 IPR002696 Putative membrane protein insertion efficiency factor SHALO_1751 83c5c257de55425bb731877aa52527e2 112 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 23 65 3.0E-10 T 18-10-2018 IPR002696 Putative membrane protein insertion efficiency factor SHALO_1751 83c5c257de55425bb731877aa52527e2 112 SMART SM01234 1 68 2.6E-25 T 18-10-2018 IPR002696 Putative membrane protein insertion efficiency factor SHALO_1751 83c5c257de55425bb731877aa52527e2 112 Pfam PF01809 Haemolytic domain 4 67 2.9E-20 T 18-10-2018 IPR002696 Putative membrane protein insertion efficiency factor SHALO_0268 aad93cb397c46e53f93dad10f318d148 656 Gene3D G3DSA:1.10.287.950 325 656 5.0E-61 T 18-10-2018 SHALO_0268 aad93cb397c46e53f93dad10f318d148 656 SUPERFAMILY SSF58104 347 655 2.09E-57 T 18-10-2018 SHALO_0268 aad93cb397c46e53f93dad10f318d148 656 SUPERFAMILY SSF103190 108 204 1.31E-11 T 18-10-2018 IPR029151 Periplasmic sensor-like domain superfamily SHALO_0268 aad93cb397c46e53f93dad10f318d148 656 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 471 594 9.8E-33 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_0268 aad93cb397c46e53f93dad10f318d148 656 Pfam PF17201 Cache 3/Cache 2 fusion domain 33 301 7.3E-83 T 18-10-2018 IPR033462 Cache 3/Cache 2 fusion domain SHALO_0268 aad93cb397c46e53f93dad10f318d148 656 Gene3D G3DSA:3.30.450.20 171 306 1.5E-12 T 18-10-2018 SHALO_0268 aad93cb397c46e53f93dad10f318d148 656 SMART SM00283 394 655 1.3E-40 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_0268 aad93cb397c46e53f93dad10f318d148 656 SMART SM00304 325 379 1.4E-6 T 18-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 SHALO_1923 1c5f0b00d9c26c9f6a6714314dce6b2e 273 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 27 251 1.1E-52 T 18-10-2018 SHALO_1923 1c5f0b00d9c26c9f6a6714314dce6b2e 273 Gene3D G3DSA:3.40.190.10 27 250 6.8E-48 T 18-10-2018 SHALO_1923 1c5f0b00d9c26c9f6a6714314dce6b2e 273 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 20 245 6.2E-42 T 18-10-2018 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 SHALO_1923 1c5f0b00d9c26c9f6a6714314dce6b2e 273 SUPERFAMILY SSF53850 23 268 1.98E-33 T 18-10-2018 SHALO_1923 1c5f0b00d9c26c9f6a6714314dce6b2e 273 Gene3D G3DSA:3.40.190.10 115 220 6.8E-48 T 18-10-2018 SHALO_1646 a2b08c1bfcfd3d680e78407c34b9669a 348 SUPERFAMILY SSF56796 28 344 8.64E-106 T 18-10-2018 SHALO_1646 a2b08c1bfcfd3d680e78407c34b9669a 348 PIRSF PIRSF001455 4 348 2.7E-104 T 18-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 SHALO_1646 a2b08c1bfcfd3d680e78407c34b9669a 348 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 343 64.423 T 18-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 SHALO_1646 a2b08c1bfcfd3d680e78407c34b9669a 348 Gene3D G3DSA:3.40.50.1970 1 164 9.0E-60 T 18-10-2018 SHALO_1646 a2b08c1bfcfd3d680e78407c34b9669a 348 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 24 342 1.5E-113 T 18-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 SHALO_1646 a2b08c1bfcfd3d680e78407c34b9669a 348 Pfam PF01761 3-dehydroquinate synthase 59 312 1.3E-103 T 18-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 SHALO_1646 a2b08c1bfcfd3d680e78407c34b9669a 348 Gene3D G3DSA:1.20.1090.10 165 347 1.5E-60 T 18-10-2018 SHALO_2306 4928bc801ad5706dfebdea062d0b4862 418 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 18-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site SHALO_2306 4928bc801ad5706dfebdea062d0b4862 418 Pfam PF00270 DEAD/DEAH box helicase 25 197 1.7E-49 T 18-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SHALO_2306 4928bc801ad5706dfebdea062d0b4862 418 Pfam PF00271 Helicase conserved C-terminal domain 234 340 3.8E-27 T 18-10-2018 IPR001650 Helicase, C-terminal SHALO_2306 4928bc801ad5706dfebdea062d0b4862 418 SUPERFAMILY SSF52540 77 360 5.63E-74 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_2306 4928bc801ad5706dfebdea062d0b4862 418 Gene3D G3DSA:3.40.50.300 1 211 8.3E-77 T 18-10-2018 SHALO_2306 4928bc801ad5706dfebdea062d0b4862 418 Gene3D G3DSA:3.40.50.300 214 415 1.3E-47 T 18-10-2018 SHALO_2306 4928bc801ad5706dfebdea062d0b4862 418 SMART SM00490 259 340 2.8E-29 T 18-10-2018 IPR001650 Helicase, C-terminal SHALO_2306 4928bc801ad5706dfebdea062d0b4862 418 SMART SM00487 20 223 3.0E-61 T 18-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain SHALO_0435 1afe44d5ae890950fc66d13384ce15da 786 PIRSF PIRSF017245 1 786 0.0 T 18-10-2018 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase GO:0005975|GO:0016832 SHALO_0435 1afe44d5ae890950fc66d13384ce15da 786 Gene3D G3DSA:3.40.50.970 384 602 3.7E-109 T 18-10-2018 SHALO_0435 1afe44d5ae890950fc66d13384ce15da 786 SUPERFAMILY SSF52518 3 366 2.36E-76 T 18-10-2018 IPR029061 Thiamin diphosphate-binding fold SHALO_0435 1afe44d5ae890950fc66d13384ce15da 786 ProSitePatterns PS60003 Phosphoketolase signature 2. 155 173 - T 18-10-2018 IPR019789 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, thiamine diphosphate binding site GO:0005975|GO:0016832 SHALO_0435 1afe44d5ae890950fc66d13384ce15da 786 Gene3D G3DSA:3.40.50.920 603 786 5.2E-77 T 18-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 SHALO_0435 1afe44d5ae890950fc66d13384ce15da 786 Pfam PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase 397 572 1.3E-89 T 18-10-2018 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase GO:0005975|GO:0016832 SHALO_0435 1afe44d5ae890950fc66d13384ce15da 786 ProSitePatterns PS60002 Phosphoketolase signature 1. 142 148 - T 18-10-2018 IPR019790 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, conserved site GO:0005975|GO:0016832 SHALO_0435 1afe44d5ae890950fc66d13384ce15da 786 Pfam PF09363 XFP C-terminal domain 583 784 1.8E-93 T 18-10-2018 IPR018969 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, C-terminal GO:0005975|GO:0016832 SHALO_0435 1afe44d5ae890950fc66d13384ce15da 786 SUPERFAMILY SSF52518 374 585 1.41E-23 T 18-10-2018 IPR029061 Thiamin diphosphate-binding fold SHALO_0435 1afe44d5ae890950fc66d13384ce15da 786 Gene3D G3DSA:3.40.50.970 1 383 2.7E-176 T 18-10-2018 SHALO_0435 1afe44d5ae890950fc66d13384ce15da 786 Hamap MF_01403 Probable phosphoketolase. 3 786 41.086 T 18-10-2018 IPR023962 Probable phosphoketolase SHALO_0435 1afe44d5ae890950fc66d13384ce15da 786 Pfam PF09364 XFP N-terminal domain 6 383 2.2E-195 T 18-10-2018 IPR018970 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal SHALO_0891 351cd8b61abcac34fd9b59426a810cc6 813 SUPERFAMILY SSF47384 582 655 9.42E-5 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SHALO_0891 351cd8b61abcac34fd9b59426a810cc6 813 Gene3D G3DSA:3.40.190.10 129 226 5.2E-28 T 18-10-2018 SHALO_0891 351cd8b61abcac34fd9b59426a810cc6 813 Gene3D G3DSA:1.10.287.130 576 657 3.4E-7 T 18-10-2018 SHALO_0891 351cd8b61abcac34fd9b59426a810cc6 813 SUPERFAMILY SSF55874 664 808 3.41E-24 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_0891 351cd8b61abcac34fd9b59426a810cc6 813 SUPERFAMILY SSF53850 44 254 3.26E-17 T 18-10-2018 SHALO_0891 351cd8b61abcac34fd9b59426a810cc6 813 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 705 808 1.1E-13 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_0891 351cd8b61abcac34fd9b59426a810cc6 813 Gene3D G3DSA:3.40.190.10 375 470 3.3E-40 T 18-10-2018 SHALO_0891 351cd8b61abcac34fd9b59426a810cc6 813 SMART SM00062 291 510 4.6E-4 T 18-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SHALO_0891 351cd8b61abcac34fd9b59426a810cc6 813 SUPERFAMILY SSF53850 292 508 3.16E-22 T 18-10-2018 SHALO_0891 351cd8b61abcac34fd9b59426a810cc6 813 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 305 507 8.1E-12 T 18-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SHALO_0891 351cd8b61abcac34fd9b59426a810cc6 813 Gene3D G3DSA:3.40.190.10 34 256 5.2E-28 T 18-10-2018 SHALO_0891 351cd8b61abcac34fd9b59426a810cc6 813 Gene3D G3DSA:3.30.565.10 659 810 3.5E-29 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_0891 351cd8b61abcac34fd9b59426a810cc6 813 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 252 1.2E-10 T 18-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SHALO_0891 351cd8b61abcac34fd9b59426a810cc6 813 SMART SM00387 700 811 5.4E-15 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_0891 351cd8b61abcac34fd9b59426a810cc6 813 PRINTS PR00344 Bacterial sensor protein C-terminal signature 771 789 2.1E-7 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_0891 351cd8b61abcac34fd9b59426a810cc6 813 PRINTS PR00344 Bacterial sensor protein C-terminal signature 759 769 2.1E-7 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_0891 351cd8b61abcac34fd9b59426a810cc6 813 PRINTS PR00344 Bacterial sensor protein C-terminal signature 795 808 2.1E-7 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_0891 351cd8b61abcac34fd9b59426a810cc6 813 PRINTS PR00344 Bacterial sensor protein C-terminal signature 741 755 2.1E-7 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_0891 351cd8b61abcac34fd9b59426a810cc6 813 Gene3D G3DSA:3.40.190.10 282 506 3.3E-40 T 18-10-2018 SHALO_2968 d95f269af992b1064919a5253ece3920 159 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 1 157 33.641 T 18-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 SHALO_2968 d95f269af992b1064919a5253ece3920 159 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 3 151 7.1E-53 T 18-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 SHALO_2968 d95f269af992b1064919a5253ece3920 159 Gene3D G3DSA:3.30.70.640 1 159 6.4E-60 T 18-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 SHALO_2968 d95f269af992b1064919a5253ece3920 159 Pfam PF01967 MoaC family 14 149 1.3E-49 T 18-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 SHALO_2968 d95f269af992b1064919a5253ece3920 159 SUPERFAMILY SSF55040 11 154 5.89E-55 T 18-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 SHALO_0806 81dbaf270c4a6f42851723d4433b29e6 268 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 33 262 1.0E-25 T 18-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SHALO_0806 81dbaf270c4a6f42851723d4433b29e6 268 SUPERFAMILY SSF111369 25 266 6.8E-18 T 18-10-2018 SHALO_0806 81dbaf270c4a6f42851723d4433b29e6 268 Gene3D G3DSA:2.40.30.170 23 265 2.0E-48 T 18-10-2018 SHALO_0806 81dbaf270c4a6f42851723d4433b29e6 268 Gene3D G3DSA:1.10.287.470 68 159 2.0E-48 T 18-10-2018 SHALO_0806 81dbaf270c4a6f42851723d4433b29e6 268 Gene3D G3DSA:2.40.50.100 34 193 2.0E-48 T 18-10-2018 SHALO_0806 81dbaf270c4a6f42851723d4433b29e6 268 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 22 266 6.8E-32 T 18-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 SHALO_0326 1c98b8a18b517f192677ed24917191a1 792 SMART SM00091 483 549 1.2E-5 T 18-10-2018 IPR000014 PAS domain SHALO_0326 1c98b8a18b517f192677ed24917191a1 792 SUPERFAMILY SSF55781 316 470 8.29E-21 T 18-10-2018 SHALO_0326 1c98b8a18b517f192677ed24917191a1 792 SMART SM00065 327 479 3.2E-8 T 18-10-2018 IPR003018 GAF domain GO:0005515 SHALO_0326 1c98b8a18b517f192677ed24917191a1 792 Pfam PF00990 Diguanylate cyclase, GGDEF domain 614 784 1.5E-42 T 18-10-2018 IPR000160 GGDEF domain SHALO_0326 1c98b8a18b517f192677ed24917191a1 792 Pfam PF13426 PAS domain 494 602 6.6E-9 T 18-10-2018 IPR000014 PAS domain SHALO_0326 1c98b8a18b517f192677ed24917191a1 792 Pfam PF13185 GAF domain 330 470 2.7E-11 T 18-10-2018 IPR003018 GAF domain GO:0005515 SHALO_0326 1c98b8a18b517f192677ed24917191a1 792 Gene3D G3DSA:3.30.70.270 612 792 4.7E-54 T 18-10-2018 SHALO_0326 1c98b8a18b517f192677ed24917191a1 792 Gene3D G3DSA:3.30.450.40 328 481 2.1E-24 T 18-10-2018 IPR029016 GAF-like domain superfamily SHALO_0326 1c98b8a18b517f192677ed24917191a1 792 SMART SM00267 603 788 1.7E-54 T 18-10-2018 IPR000160 GGDEF domain SHALO_0326 1c98b8a18b517f192677ed24917191a1 792 Gene3D G3DSA:3.30.450.20 482 611 5.6E-23 T 18-10-2018 SHALO_0326 1c98b8a18b517f192677ed24917191a1 792 SUPERFAMILY SSF55073 619 790 1.33E-44 T 18-10-2018 IPR029787 Nucleotide cyclase SHALO_0326 1c98b8a18b517f192677ed24917191a1 792 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 479 608 5.1E-20 T 18-10-2018 IPR000014 PAS domain SHALO_0326 1c98b8a18b517f192677ed24917191a1 792 Gene3D G3DSA:3.40.190.10 133 226 1.6E-73 T 18-10-2018 SHALO_0326 1c98b8a18b517f192677ed24917191a1 792 SMART SM00062 47 267 1.2E-34 T 18-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SHALO_0326 1c98b8a18b517f192677ed24917191a1 792 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 611 786 1.8E-41 T 18-10-2018 IPR000160 GGDEF domain SHALO_0326 1c98b8a18b517f192677ed24917191a1 792 SUPERFAMILY SSF53850 40 268 5.66E-51 T 18-10-2018 SHALO_0326 1c98b8a18b517f192677ed24917191a1 792 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 48 265 2.0E-46 T 18-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SHALO_0326 1c98b8a18b517f192677ed24917191a1 792 SUPERFAMILY SSF55785 489 605 1.27E-19 T 18-10-2018 IPR035965 PAS domain superfamily SHALO_0326 1c98b8a18b517f192677ed24917191a1 792 Gene3D G3DSA:3.40.190.10 38 263 1.6E-73 T 18-10-2018 SHALO_0326 1c98b8a18b517f192677ed24917191a1 792 SMART SM00086 561 603 1.2E-5 T 18-10-2018 IPR001610 PAC motif SHALO_1510 d5dcf7a57a1edbfadd40833c33f8a483 494 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 6 486 2.0E-156 T 18-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 SHALO_1510 d5dcf7a57a1edbfadd40833c33f8a483 494 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 494 165.922 T 18-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 SHALO_1510 d5dcf7a57a1edbfadd40833c33f8a483 494 SUPERFAMILY SSF52540 1 230 6.31E-53 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_1510 d5dcf7a57a1edbfadd40833c33f8a483 494 Gene3D G3DSA:3.40.50.300 1 236 5.8E-57 T 18-10-2018 SHALO_1510 d5dcf7a57a1edbfadd40833c33f8a483 494 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 252 439 3.9E-54 T 18-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 SHALO_1510 d5dcf7a57a1edbfadd40833c33f8a483 494 SUPERFAMILY SSF52317 192 431 1.12E-35 T 18-10-2018 IPR029062 Class I glutamine amidotransferase-like SHALO_1510 d5dcf7a57a1edbfadd40833c33f8a483 494 Gene3D G3DSA:3.40.50.880 251 432 5.1E-25 T 18-10-2018 IPR029062 Class I glutamine amidotransferase-like SHALO_1510 d5dcf7a57a1edbfadd40833c33f8a483 494 Pfam PF13500 AAA domain 5 229 6.0E-26 T 18-10-2018 SHALO_2204 6ff9b3afc48efbcda737d89617dced23 655 Gene3D G3DSA:1.20.58.760 436 631 2.1E-63 T 18-10-2018 SHALO_2204 6ff9b3afc48efbcda737d89617dced23 655 ProSitePatterns PS00674 AAA-protein family signature. 324 342 - T 18-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 SHALO_2204 6ff9b3afc48efbcda737d89617dced23 655 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 219 352 1.1E-44 T 18-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 SHALO_2204 6ff9b3afc48efbcda737d89617dced23 655 SMART SM00382 215 356 3.9E-24 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_2204 6ff9b3afc48efbcda737d89617dced23 655 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 21 652 34.547 T 18-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 SHALO_2204 6ff9b3afc48efbcda737d89617dced23 655 Pfam PF01434 Peptidase family M41 417 620 1.1E-68 T 18-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 SHALO_2204 6ff9b3afc48efbcda737d89617dced23 655 Gene3D G3DSA:3.40.50.300 173 353 6.9E-69 T 18-10-2018 SHALO_2204 6ff9b3afc48efbcda737d89617dced23 655 SUPERFAMILY SSF52540 178 449 3.38E-67 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_2204 6ff9b3afc48efbcda737d89617dced23 655 Pfam PF06480 FtsH Extracellular 24 122 2.0E-6 T 18-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 SHALO_2204 6ff9b3afc48efbcda737d89617dced23 655 Gene3D G3DSA:1.10.8.60 355 432 1.6E-23 T 18-10-2018 SHALO_2204 6ff9b3afc48efbcda737d89617dced23 655 SUPERFAMILY SSF140990 436 625 1.31E-60 T 18-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 SHALO_2204 6ff9b3afc48efbcda737d89617dced23 655 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 131 622 1.5E-213 T 18-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 SHALO_2053 a27bedfe46e13d28e51fa248a670f471 218 Pfam PF00072 Response regulator receiver domain 3 111 6.8E-24 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_2053 a27bedfe46e13d28e51fa248a670f471 218 SMART SM00448 1 111 5.3E-29 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_2053 a27bedfe46e13d28e51fa248a670f471 218 SUPERFAMILY SSF46894 121 211 1.56E-11 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHALO_2053 a27bedfe46e13d28e51fa248a670f471 218 Gene3D G3DSA:1.10.10.10 127 217 1.0E-12 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_2053 a27bedfe46e13d28e51fa248a670f471 218 SUPERFAMILY SSF52172 1 117 2.99E-29 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_2053 a27bedfe46e13d28e51fa248a670f471 218 SMART SM00862 141 210 1.0E-8 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_2053 a27bedfe46e13d28e51fa248a670f471 218 Gene3D G3DSA:3.40.50.2300 1 126 3.7E-31 T 18-10-2018 SHALO_2053 a27bedfe46e13d28e51fa248a670f471 218 Pfam PF00486 Transcriptional regulatory protein, C terminal 143 210 1.3E-9 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_0204 e3242ac609d20dc658dfcb23239518b9 294 SMART SM00729 5 184 0.0045 T 18-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 SHALO_0204 e3242ac609d20dc658dfcb23239518b9 294 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 1 294 3.2E-88 T 18-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 SHALO_0204 e3242ac609d20dc658dfcb23239518b9 294 SUPERFAMILY SSF102114 6 242 1.24E-55 T 18-10-2018 SHALO_0204 e3242ac609d20dc658dfcb23239518b9 294 Gene3D G3DSA:3.20.20.70 1 294 1.3E-66 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_0204 e3242ac609d20dc658dfcb23239518b9 294 Pfam PF04055 Radical SAM superfamily 10 147 1.7E-20 T 18-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 SHALO_0204 e3242ac609d20dc658dfcb23239518b9 294 Pfam PF06463 Molybdenum Cofactor Synthesis C 154 275 3.0E-28 T 18-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 SHALO_2656 72780da8d0dba2b1751b4e1e2458a732 200 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 90 101 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_2656 72780da8d0dba2b1751b4e1e2458a732 200 Gene3D G3DSA:3.30.70.20 8 177 1.8E-35 T 18-10-2018 SHALO_2656 72780da8d0dba2b1751b4e1e2458a732 200 SUPERFAMILY SSF54862 4 183 7.12E-49 T 18-10-2018 SHALO_2656 72780da8d0dba2b1751b4e1e2458a732 200 PRINTS PR00354 7Fe ferredoxin signature 58 68 9.2E-6 T 18-10-2018 IPR000813 7Fe ferredoxin GO:0009055 SHALO_2656 72780da8d0dba2b1751b4e1e2458a732 200 PRINTS PR00354 7Fe ferredoxin signature 85 102 9.2E-6 T 18-10-2018 IPR000813 7Fe ferredoxin GO:0009055 SHALO_2656 72780da8d0dba2b1751b4e1e2458a732 200 PRINTS PR00354 7Fe ferredoxin signature 68 78 9.2E-6 T 18-10-2018 IPR000813 7Fe ferredoxin GO:0009055 SHALO_2656 72780da8d0dba2b1751b4e1e2458a732 200 Pfam PF13247 4Fe-4S dicluster domain 55 167 3.4E-11 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_2656 72780da8d0dba2b1751b4e1e2458a732 200 Gene3D G3DSA:3.30.70.20 64 121 1.8E-35 T 18-10-2018 SHALO_2758 02c75a505da952aba7881c292bc76834 712 SMART SM01049 45 167 1.9E-23 T 18-10-2018 IPR033480 Single Cache domain 2 SHALO_2758 02c75a505da952aba7881c292bc76834 712 SMART SM01049 210 284 1.5 T 18-10-2018 IPR033480 Single Cache domain 2 SHALO_2758 02c75a505da952aba7881c292bc76834 712 Gene3D G3DSA:3.30.450.20 224 345 3.2E-24 T 18-10-2018 SHALO_2758 02c75a505da952aba7881c292bc76834 712 Gene3D G3DSA:1.10.287.950 381 712 1.6E-61 T 18-10-2018 SHALO_2758 02c75a505da952aba7881c292bc76834 712 SMART SM00283 443 711 4.1E-52 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_2758 02c75a505da952aba7881c292bc76834 712 Gene3D G3DSA:3.30.450.20 71 223 1.5E-36 T 18-10-2018 SHALO_2758 02c75a505da952aba7881c292bc76834 712 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 528 651 9.3E-35 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_2758 02c75a505da952aba7881c292bc76834 712 SMART SM00304 381 435 1.3E-7 T 18-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 SHALO_2758 02c75a505da952aba7881c292bc76834 712 Pfam PF08269 Cache domain 48 339 9.0E-62 T 18-10-2018 IPR004010 Double Cache domain 2 SHALO_2758 02c75a505da952aba7881c292bc76834 712 SUPERFAMILY SSF58104 403 712 2.09E-58 T 18-10-2018 SHALO_2853 7260298c5c8fddcb2bcf567fd8860c43 457 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 1 185 9.9E-12 T 18-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 SHALO_2853 7260298c5c8fddcb2bcf567fd8860c43 457 SUPERFAMILY SSF52540 3 228 7.14E-52 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_2853 7260298c5c8fddcb2bcf567fd8860c43 457 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 4 401 2.1E-105 T 18-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 SHALO_2853 7260298c5c8fddcb2bcf567fd8860c43 457 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 56 71 - T 18-10-2018 IPR031157 Tr-type G domain, conserved site SHALO_2853 7260298c5c8fddcb2bcf567fd8860c43 457 SUPERFAMILY SSF50447 214 304 1.56E-14 T 18-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily SHALO_2853 7260298c5c8fddcb2bcf567fd8860c43 457 Gene3D G3DSA:3.40.50.300 1 211 4.8E-63 T 18-10-2018 SHALO_2853 7260298c5c8fddcb2bcf567fd8860c43 457 SUPERFAMILY SSF50465 310 410 2.64E-18 T 18-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal SHALO_2853 7260298c5c8fddcb2bcf567fd8860c43 457 Gene3D G3DSA:2.40.30.10 213 305 1.8E-20 T 18-10-2018 SHALO_2853 7260298c5c8fddcb2bcf567fd8860c43 457 Gene3D G3DSA:2.40.30.10 308 410 1.2E-21 T 18-10-2018 SHALO_2853 7260298c5c8fddcb2bcf567fd8860c43 457 Pfam PF00009 Elongation factor Tu GTP binding domain 3 185 4.9E-40 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHALO_2853 7260298c5c8fddcb2bcf567fd8860c43 457 PRINTS PR00315 GTP-binding elongation factor signature 63 71 3.5E-16 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHALO_2853 7260298c5c8fddcb2bcf567fd8860c43 457 PRINTS PR00315 GTP-binding elongation factor signature 5 18 3.5E-16 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHALO_2853 7260298c5c8fddcb2bcf567fd8860c43 457 PRINTS PR00315 GTP-binding elongation factor signature 99 110 3.5E-16 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHALO_2853 7260298c5c8fddcb2bcf567fd8860c43 457 PRINTS PR00315 GTP-binding elongation factor signature 136 145 3.5E-16 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHALO_2853 7260298c5c8fddcb2bcf567fd8860c43 457 PRINTS PR00315 GTP-binding elongation factor signature 83 93 3.5E-16 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHALO_2302 006dbdacd92e2203ebffa84e8e72402b 481 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 289 296 - T 18-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SHALO_2302 006dbdacd92e2203ebffa84e8e72402b 481 Pfam PF02785 Biotin carboxylase C-terminal domain 339 445 2.1E-36 T 18-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 SHALO_2302 006dbdacd92e2203ebffa84e8e72402b 481 Pfam PF00289 Biotin carboxylase, N-terminal domain 6 113 5.0E-40 T 18-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 SHALO_2302 006dbdacd92e2203ebffa84e8e72402b 481 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 118 326 8.8E-79 T 18-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SHALO_2302 006dbdacd92e2203ebffa84e8e72402b 481 Gene3D G3DSA:3.30.470.130 1 451 3.5E-181 T 18-10-2018 SHALO_2302 006dbdacd92e2203ebffa84e8e72402b 481 SUPERFAMILY SSF52440 4 115 1.15E-42 T 18-10-2018 IPR016185 Pre-ATP-grasp domain superfamily SHALO_2302 006dbdacd92e2203ebffa84e8e72402b 481 SUPERFAMILY SSF51246 334 451 6.28E-41 T 18-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 SHALO_2302 006dbdacd92e2203ebffa84e8e72402b 481 SUPERFAMILY SSF56059 86 351 7.78E-67 T 18-10-2018 SHALO_2302 006dbdacd92e2203ebffa84e8e72402b 481 SMART SM00878 339 445 1.2E-55 T 18-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 SHALO_2302 006dbdacd92e2203ebffa84e8e72402b 481 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 156 170 - T 18-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SHALO_1209 388fb194508a141e858080e4eec5baf8 834 Gene3D G3DSA:2.40.50.180 705 772 3.0E-11 T 18-10-2018 SHALO_1209 388fb194508a141e858080e4eec5baf8 834 SMART SM00260 682 824 0.0026 T 18-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 SHALO_1209 388fb194508a141e858080e4eec5baf8 834 SUPERFAMILY SSF50341 682 823 1.12E-13 T 18-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 SHALO_1209 388fb194508a141e858080e4eec5baf8 834 Gene3D G3DSA:2.30.30.40 689 806 3.0E-11 T 18-10-2018 SHALO_1209 388fb194508a141e858080e4eec5baf8 834 Pfam PF01584 CheW-like domain 689 823 6.4E-13 T 18-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 SHALO_1726 a075ae5c11a79524406c4928165a10be 238 Gene3D G3DSA:3.10.290.10 1 58 5.8E-14 T 18-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 SHALO_1726 a075ae5c11a79524406c4928165a10be 238 SUPERFAMILY SSF55174 1 57 1.77E-13 T 18-10-2018 SHALO_1726 a075ae5c11a79524406c4928165a10be 238 Gene3D G3DSA:3.40.50.150 59 238 1.0E-50 T 18-10-2018 SHALO_1726 a075ae5c11a79524406c4928165a10be 238 SUPERFAMILY SSF53335 52 234 2.82E-18 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_1726 a075ae5c11a79524406c4928165a10be 238 SMART SM00363 1 65 2.6E-13 T 18-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_1726 a075ae5c11a79524406c4928165a10be 238 Pfam PF01479 S4 domain 1 48 4.3E-12 T 18-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_1726 a075ae5c11a79524406c4928165a10be 238 TIGRFAM TIGR00478 tly: TlyA family rRNA methyltransferase/putative hemolysin 2 228 1.3E-55 T 18-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 SHALO_1726 a075ae5c11a79524406c4928165a10be 238 Pfam PF01728 FtsJ-like methyltransferase 56 183 2.4E-12 T 18-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 SHALO_0670 b0e31db726938c67232a15d01af67033 86 SUPERFAMILY SSF110324 2 83 7.67E-32 T 18-10-2018 SHALO_0670 b0e31db726938c67232a15d01af67033 86 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 81 6.3E-39 T 18-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_0670 b0e31db726938c67232a15d01af67033 86 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 18-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_0670 b0e31db726938c67232a15d01af67033 86 Gene3D G3DSA:2.40.50.100 20 85 5.7E-29 T 18-10-2018 SHALO_0670 b0e31db726938c67232a15d01af67033 86 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 84 27.006 T 18-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_0670 b0e31db726938c67232a15d01af67033 86 PRINTS PR00063 Ribosomal protein L27 signature 54 78 2.0E-36 T 18-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_0670 b0e31db726938c67232a15d01af67033 86 PRINTS PR00063 Ribosomal protein L27 signature 29 53 2.0E-36 T 18-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_0670 b0e31db726938c67232a15d01af67033 86 PRINTS PR00063 Ribosomal protein L27 signature 4 28 2.0E-36 T 18-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_0670 b0e31db726938c67232a15d01af67033 86 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 69 4.0E-14 T 18-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_0670 b0e31db726938c67232a15d01af67033 86 Pfam PF01016 Ribosomal L27 protein 2 81 5.7E-36 T 18-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_1855 dc757421141f83e0ff44b25aaff78ac3 906 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 324 845 3.8E-133 T 18-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 SHALO_1855 dc757421141f83e0ff44b25aaff78ac3 906 SUPERFAMILY SSF54665 166 329 2.88E-38 T 18-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily SHALO_1855 dc757421141f83e0ff44b25aaff78ac3 906 Gene3D G3DSA:3.30.365.10 615 902 8.8E-92 T 18-10-2018 SHALO_1855 dc757421141f83e0ff44b25aaff78ac3 906 SUPERFAMILY SSF47741 86 190 1.05E-34 T 18-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily SHALO_1855 dc757421141f83e0ff44b25aaff78ac3 906 SMART SM01008 190 307 1.7E-32 T 18-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead SHALO_1855 dc757421141f83e0ff44b25aaff78ac3 906 Pfam PF01799 [2Fe-2S] binding domain 75 149 2.0E-26 T 18-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 SHALO_1855 dc757421141f83e0ff44b25aaff78ac3 906 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 7 60 1.5E-6 T 18-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SHALO_1855 dc757421141f83e0ff44b25aaff78ac3 906 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 40 48 - T 18-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 SHALO_1855 dc757421141f83e0ff44b25aaff78ac3 906 Gene3D G3DSA:3.30.365.10 364 456 1.1E-73 T 18-10-2018 SHALO_1855 dc757421141f83e0ff44b25aaff78ac3 906 Gene3D G3DSA:3.30.365.10 351 573 1.1E-73 T 18-10-2018 SHALO_1855 dc757421141f83e0ff44b25aaff78ac3 906 SUPERFAMILY SSF56003 299 905 1.44E-142 T 18-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 SHALO_1855 dc757421141f83e0ff44b25aaff78ac3 906 SUPERFAMILY SSF54292 5 90 8.26E-20 T 18-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 SHALO_1855 dc757421141f83e0ff44b25aaff78ac3 906 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 203 307 1.1E-20 T 18-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead SHALO_1855 dc757421141f83e0ff44b25aaff78ac3 906 Gene3D G3DSA:1.10.150.120 75 193 1.7E-35 T 18-10-2018 SHALO_1855 dc757421141f83e0ff44b25aaff78ac3 906 Gene3D G3DSA:3.10.20.30 1 74 3.6E-24 T 18-10-2018 IPR012675 Beta-grasp domain superfamily SHALO_1855 dc757421141f83e0ff44b25aaff78ac3 906 Gene3D G3DSA:3.30.365.10 627 750 8.8E-92 T 18-10-2018 SHALO_1855 dc757421141f83e0ff44b25aaff78ac3 906 Gene3D G3DSA:3.90.1170.50 208 307 4.5E-32 T 18-10-2018 SHALO_2752 1a8b8af70a3ee8b87454d55cb01c055b 897 SMART SM00388 675 742 7.9E-13 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_2752 1a8b8af70a3ee8b87454d55cb01c055b 897 SUPERFAMILY SSF55874 731 893 1.05E-30 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_2752 1a8b8af70a3ee8b87454d55cb01c055b 897 SMART SM00387 786 896 1.4E-22 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_2752 1a8b8af70a3ee8b87454d55cb01c055b 897 Pfam PF00512 His Kinase A (phospho-acceptor) domain 680 741 1.2E-11 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_2752 1a8b8af70a3ee8b87454d55cb01c055b 897 SUPERFAMILY SSF52402 250 357 2.51E-10 T 18-10-2018 SHALO_2752 1a8b8af70a3ee8b87454d55cb01c055b 897 PRINTS PR00344 Bacterial sensor protein C-terminal signature 841 851 7.9E-6 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_2752 1a8b8af70a3ee8b87454d55cb01c055b 897 PRINTS PR00344 Bacterial sensor protein C-terminal signature 857 875 7.9E-6 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_2752 1a8b8af70a3ee8b87454d55cb01c055b 897 SUPERFAMILY SSF47384 671 743 2.16E-14 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SHALO_2752 1a8b8af70a3ee8b87454d55cb01c055b 897 Gene3D G3DSA:3.40.50.620 233 361 7.7E-10 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_2752 1a8b8af70a3ee8b87454d55cb01c055b 897 Gene3D G3DSA:1.20.120.620 393 493 5.6E-20 T 18-10-2018 IPR038318 KdpD, transmembrane domain superfamily SHALO_2752 1a8b8af70a3ee8b87454d55cb01c055b 897 Gene3D G3DSA:1.10.287.130 666 739 1.1E-14 T 18-10-2018 SHALO_2752 1a8b8af70a3ee8b87454d55cb01c055b 897 SUPERFAMILY SSF52540 19 145 2.54E-8 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_2752 1a8b8af70a3ee8b87454d55cb01c055b 897 Pfam PF13493 Domain of unknown function (DUF4118) 398 492 1.2E-20 T 18-10-2018 IPR025201 Sensor protein KdpD, transmembrane domain SHALO_2752 1a8b8af70a3ee8b87454d55cb01c055b 897 Gene3D G3DSA:3.30.450.40 505 665 3.5E-22 T 18-10-2018 IPR029016 GAF-like domain superfamily SHALO_2752 1a8b8af70a3ee8b87454d55cb01c055b 897 Gene3D G3DSA:3.30.565.10 740 894 2.9E-29 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_2752 1a8b8af70a3ee8b87454d55cb01c055b 897 Gene3D G3DSA:3.40.50.300 19 229 3.9E-90 T 18-10-2018 SHALO_2752 1a8b8af70a3ee8b87454d55cb01c055b 897 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 22 230 1.5E-87 T 18-10-2018 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 SHALO_2752 1a8b8af70a3ee8b87454d55cb01c055b 897 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 791 893 1.4E-13 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_1472 7d5582ddc103ed74809dda13a28f9d5a 81 PIRSF PIRSF038881 1 80 2.0E-24 T 18-10-2018 IPR025490 RNA-binding protein, HP1423 type SHALO_1472 7d5582ddc103ed74809dda13a28f9d5a 81 Pfam PF01479 S4 domain 1 47 2.4E-8 T 18-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_1472 7d5582ddc103ed74809dda13a28f9d5a 81 SUPERFAMILY SSF55174 1 72 1.7E-17 T 18-10-2018 SHALO_1472 7d5582ddc103ed74809dda13a28f9d5a 81 Gene3D G3DSA:3.10.290.10 1 81 1.1E-22 T 18-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 SHALO_1472 7d5582ddc103ed74809dda13a28f9d5a 81 SMART SM00363 1 62 1.3E-7 T 18-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_1821 01be840b983a63a4e27ba618b848388e 2617 SMART SM00912 44 164 4.5E-43 T 18-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal SHALO_1821 01be840b983a63a4e27ba618b848388e 2617 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1223 1256 0.0033 T 18-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat SHALO_1821 01be840b983a63a4e27ba618b848388e 2617 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 614 633 2.4 T 18-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat SHALO_1821 01be840b983a63a4e27ba618b848388e 2617 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 549 587 0.02 T 18-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat SHALO_1821 01be840b983a63a4e27ba618b848388e 2617 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 472 508 0.0054 T 18-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat SHALO_1821 01be840b983a63a4e27ba618b848388e 2617 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 385 411 0.026 T 18-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat SHALO_1821 01be840b983a63a4e27ba618b848388e 2617 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1186 1221 0.32 T 18-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat SHALO_1821 01be840b983a63a4e27ba618b848388e 2617 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 513 549 1.8 T 18-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat SHALO_1821 01be840b983a63a4e27ba618b848388e 2617 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1202 1241 3.0E-5 T 18-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat SHALO_1821 01be840b983a63a4e27ba618b848388e 2617 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 62 158 3.0E-20 T 18-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal SHALO_1821 01be840b983a63a4e27ba618b848388e 2617 SUPERFAMILY SSF51126 38 305 2.51E-58 T 18-10-2018 IPR011050 Pectin lyase fold/virulence factor SHALO_1821 01be840b983a63a4e27ba618b848388e 2617 Gene3D G3DSA:2.160.20.10 31 320 1.5E-86 T 18-10-2018 IPR012334 Pectin lyase fold SHALO_1821 01be840b983a63a4e27ba618b848388e 2617 Pfam PF13332 Haemagluttinin repeat 1586 1656 3.7E-4 T 18-10-2018 IPR025157 Hemagglutinin repeat SHALO_1821 01be840b983a63a4e27ba618b848388e 2617 Pfam PF13332 Haemagluttinin repeat 1344 1410 0.0038 T 18-10-2018 IPR025157 Hemagglutinin repeat SHALO_1821 01be840b983a63a4e27ba618b848388e 2617 Pfam PF13332 Haemagluttinin repeat 1900 2052 2.6E-21 T 18-10-2018 IPR025157 Hemagglutinin repeat SHALO_1821 01be840b983a63a4e27ba618b848388e 2617 Pfam PF13332 Haemagluttinin repeat 1489 1572 1.8E-7 T 18-10-2018 IPR025157 Hemagglutinin repeat SHALO_1821 01be840b983a63a4e27ba618b848388e 2617 Pfam PF13332 Haemagluttinin repeat 1690 1787 7.4E-6 T 18-10-2018 IPR025157 Hemagglutinin repeat SHALO_1821 01be840b983a63a4e27ba618b848388e 2617 Pfam PF05860 haemagglutination activity domain 32 162 6.9E-31 T 18-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal SHALO_0276 024434b0bfe0f4a11a361fb33ff504cc 749 Gene3D G3DSA:3.10.20.310 18 85 1.6E-11 T 18-10-2018 SHALO_0276 024434b0bfe0f4a11a361fb33ff504cc 749 Gene3D G3DSA:3.10.20.310 169 259 2.1E-13 T 18-10-2018 SHALO_0276 024434b0bfe0f4a11a361fb33ff504cc 749 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 3 749 20.334 T 18-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 SHALO_0276 024434b0bfe0f4a11a361fb33ff504cc 749 Gene3D G3DSA:3.10.20.310 344 418 3.8E-19 T 18-10-2018 SHALO_0276 024434b0bfe0f4a11a361fb33ff504cc 749 Pfam PF01103 Surface antigen 442 749 1.3E-61 T 18-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 SHALO_0276 024434b0bfe0f4a11a361fb33ff504cc 749 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 20 749 1.8E-189 T 18-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 SHALO_0276 024434b0bfe0f4a11a361fb33ff504cc 749 PIRSF PIRSF006076 1 749 1.1E-194 T 18-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 SHALO_0276 024434b0bfe0f4a11a361fb33ff504cc 749 Gene3D G3DSA:2.40.160.50 419 749 1.0E-73 T 18-10-2018 SHALO_0276 024434b0bfe0f4a11a361fb33ff504cc 749 Pfam PF07244 Surface antigen variable number repeat 87 164 5.2E-10 T 18-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 SHALO_0276 024434b0bfe0f4a11a361fb33ff504cc 749 Pfam PF07244 Surface antigen variable number repeat 168 258 2.5E-4 T 18-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 SHALO_0276 024434b0bfe0f4a11a361fb33ff504cc 749 Pfam PF07244 Surface antigen variable number repeat 277 337 1.8E-6 T 18-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 SHALO_0276 024434b0bfe0f4a11a361fb33ff504cc 749 Pfam PF07244 Surface antigen variable number repeat 343 414 2.4E-12 T 18-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 SHALO_0276 024434b0bfe0f4a11a361fb33ff504cc 749 Gene3D G3DSA:3.10.20.310 260 342 1.2E-11 T 18-10-2018 SHALO_0276 024434b0bfe0f4a11a361fb33ff504cc 749 Gene3D G3DSA:3.10.20.310 86 167 4.0E-11 T 18-10-2018 SHALO_2008 8d00ce86fe24d59b9ae941a8f8fdf9ff 102 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 19 97 1.4E-32 T 18-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 SHALO_2008 8d00ce86fe24d59b9ae941a8f8fdf9ff 102 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 11 97 25.651 T 18-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS SHALO_2008 8d00ce86fe24d59b9ae941a8f8fdf9ff 102 SUPERFAMILY SSF54736 17 101 9.94E-30 T 18-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like SHALO_2008 8d00ce86fe24d59b9ae941a8f8fdf9ff 102 Gene3D G3DSA:3.30.1390.10 2 102 3.1E-39 T 18-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like SHALO_2455 e27112ec579aa75d7619683713ae6541 552 Pfam PF01807 CHC2 zinc finger 3 97 7.1E-37 T 18-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 SHALO_2455 e27112ec579aa75d7619683713ae6541 552 Hamap MF_00974 DNA primase [dnaG]. 1 536 25.369 T 18-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 SHALO_2455 e27112ec579aa75d7619683713ae6541 552 Gene3D G3DSA:3.90.580.10 3 98 3.2E-37 T 18-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 SHALO_2455 e27112ec579aa75d7619683713ae6541 552 Pfam PF13662 Toprim domain 247 321 1.2E-16 T 18-10-2018 IPR006171 TOPRIM domain SHALO_2455 e27112ec579aa75d7619683713ae6541 552 PIRSF PIRSF002811 1 548 2.8E-137 T 18-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 SHALO_2455 e27112ec579aa75d7619683713ae6541 552 Pfam PF10410 DnaB-helicase binding domain of primase 353 404 1.2E-7 T 18-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 SHALO_2455 e27112ec579aa75d7619683713ae6541 552 Gene3D G3DSA:1.10.860.10 425 550 2.5E-30 T 18-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal SHALO_2455 e27112ec579aa75d7619683713ae6541 552 SMART SM00493 246 317 5.3E-17 T 18-10-2018 IPR006171 TOPRIM domain SHALO_2455 e27112ec579aa75d7619683713ae6541 552 Pfam PF08275 DNA primase catalytic core, N-terminal domain 116 238 4.0E-32 T 18-10-2018 IPR013264 DNA primase, catalytic core, N-terminal SHALO_2455 e27112ec579aa75d7619683713ae6541 552 SUPERFAMILY SSF57783 1 96 1.41E-34 T 18-10-2018 SHALO_2455 e27112ec579aa75d7619683713ae6541 552 SMART SM00400 33 87 9.7E-31 T 18-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 SHALO_2455 e27112ec579aa75d7619683713ae6541 552 Gene3D G3DSA:3.90.980.10 107 227 1.1E-28 T 18-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily SHALO_2455 e27112ec579aa75d7619683713ae6541 552 TIGRFAM TIGR01391 dnaG: DNA primase 1 401 3.0E-131 T 18-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 SHALO_2455 e27112ec579aa75d7619683713ae6541 552 Pfam PF16730 DnaG-primase C-terminal, helicase-binding domain 428 545 1.6E-39 T 18-10-2018 IPR031988 DNA primase DnaG, C-terminal helicase-binding domain SHALO_2455 e27112ec579aa75d7619683713ae6541 552 Gene3D G3DSA:3.40.1360.10 228 351 7.2E-34 T 18-10-2018 SHALO_2455 e27112ec579aa75d7619683713ae6541 552 SUPERFAMILY SSF56731 108 406 6.41E-84 T 18-10-2018 SHALO_2484 dc11f141d6d06751c0cbb54a7fa71d9a 202 Pfam PF00805 Pentapeptide repeats (8 copies) 134 171 5.1E-10 T 18-10-2018 IPR001646 Pentapeptide repeat SHALO_2484 dc11f141d6d06751c0cbb54a7fa71d9a 202 Pfam PF00805 Pentapeptide repeats (8 copies) 33 70 1.6E-7 T 18-10-2018 IPR001646 Pentapeptide repeat SHALO_2484 dc11f141d6d06751c0cbb54a7fa71d9a 202 Pfam PF00805 Pentapeptide repeats (8 copies) 96 126 1.6E-6 T 18-10-2018 IPR001646 Pentapeptide repeat SHALO_2484 dc11f141d6d06751c0cbb54a7fa71d9a 202 Gene3D G3DSA:2.160.20.80 23 200 1.1E-37 T 18-10-2018 SHALO_2484 dc11f141d6d06751c0cbb54a7fa71d9a 202 SUPERFAMILY SSF141571 28 181 2.35E-35 T 18-10-2018 SHALO_1502 c207fadff22aa2f98b82a9e4e7da7117 608 Pfam PF07695 7TM diverse intracellular signalling 169 366 5.7E-13 T 18-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 SHALO_1502 c207fadff22aa2f98b82a9e4e7da7117 608 PRINTS PR00344 Bacterial sensor protein C-terminal signature 540 554 1.6E-7 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_1502 c207fadff22aa2f98b82a9e4e7da7117 608 PRINTS PR00344 Bacterial sensor protein C-terminal signature 595 608 1.6E-7 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_1502 c207fadff22aa2f98b82a9e4e7da7117 608 PRINTS PR00344 Bacterial sensor protein C-terminal signature 558 568 1.6E-7 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_1502 c207fadff22aa2f98b82a9e4e7da7117 608 PRINTS PR00344 Bacterial sensor protein C-terminal signature 571 589 1.6E-7 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_1502 c207fadff22aa2f98b82a9e4e7da7117 608 SUPERFAMILY SSF47384 389 459 1.02E-7 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SHALO_1502 c207fadff22aa2f98b82a9e4e7da7117 608 Gene3D G3DSA:1.10.287.130 378 463 7.7E-11 T 18-10-2018 SHALO_1502 c207fadff22aa2f98b82a9e4e7da7117 608 SUPERFAMILY SSF55874 461 608 1.83E-23 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_1502 c207fadff22aa2f98b82a9e4e7da7117 608 Gene3D G3DSA:3.30.565.10 464 608 3.9E-28 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_1502 c207fadff22aa2f98b82a9e4e7da7117 608 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 506 608 8.4E-13 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_1502 c207fadff22aa2f98b82a9e4e7da7117 608 SMART SM00387 503 608 8.0E-9 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_0260 16bcc685c3cc691eee7df0c5133c8aa7 341 Gene3D G3DSA:1.10.220.30 100 203 7.8E-32 T 18-10-2018 SHALO_0260 16bcc685c3cc691eee7df0c5133c8aa7 341 Pfam PF14841 FliG middle domain 125 198 2.6E-26 T 18-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain SHALO_0260 16bcc685c3cc691eee7df0c5133c8aa7 341 PIRSF PIRSF003161 8 340 1.4E-112 T 18-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SHALO_0260 16bcc685c3cc691eee7df0c5133c8aa7 341 SUPERFAMILY SSF48029 125 333 7.19E-59 T 18-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical SHALO_0260 16bcc685c3cc691eee7df0c5133c8aa7 341 SUPERFAMILY SSF48029 18 110 5.23E-17 T 18-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical SHALO_0260 16bcc685c3cc691eee7df0c5133c8aa7 341 PRINTS PR00954 Flagellar motor switch protein FliG signature 43 69 4.2E-57 T 18-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SHALO_0260 16bcc685c3cc691eee7df0c5133c8aa7 341 PRINTS PR00954 Flagellar motor switch protein FliG signature 257 277 4.2E-57 T 18-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SHALO_0260 16bcc685c3cc691eee7df0c5133c8aa7 341 PRINTS PR00954 Flagellar motor switch protein FliG signature 235 255 4.2E-57 T 18-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SHALO_0260 16bcc685c3cc691eee7df0c5133c8aa7 341 PRINTS PR00954 Flagellar motor switch protein FliG signature 204 229 4.2E-57 T 18-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SHALO_0260 16bcc685c3cc691eee7df0c5133c8aa7 341 PRINTS PR00954 Flagellar motor switch protein FliG signature 281 307 4.2E-57 T 18-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SHALO_0260 16bcc685c3cc691eee7df0c5133c8aa7 341 PRINTS PR00954 Flagellar motor switch protein FliG signature 14 30 4.2E-57 T 18-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SHALO_0260 16bcc685c3cc691eee7df0c5133c8aa7 341 PRINTS PR00954 Flagellar motor switch protein FliG signature 124 147 4.2E-57 T 18-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SHALO_0260 16bcc685c3cc691eee7df0c5133c8aa7 341 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 11 340 8.7E-125 T 18-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SHALO_0260 16bcc685c3cc691eee7df0c5133c8aa7 341 Gene3D G3DSA:1.10.220.30 204 340 1.0E-35 T 18-10-2018 SHALO_0260 16bcc685c3cc691eee7df0c5133c8aa7 341 Gene3D G3DSA:1.10.220.30 10 92 3.7E-14 T 18-10-2018 SHALO_0260 16bcc685c3cc691eee7df0c5133c8aa7 341 Pfam PF01706 FliG C-terminal domain 228 333 1.8E-33 T 18-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal SHALO_0260 16bcc685c3cc691eee7df0c5133c8aa7 341 Pfam PF14842 FliG N-terminal domain 13 113 6.3E-29 T 18-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain SHALO_1773 9f9283a69d641d335b6e3c2056bce601 152 Gene3D G3DSA:1.25.40.10 25 149 6.2E-6 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SHALO_1773 9f9283a69d641d335b6e3c2056bce601 152 Pfam PF12895 Anaphase-promoting complex, cyclosome, subunit 3 71 130 1.5E-8 T 18-10-2018 SHALO_1773 9f9283a69d641d335b6e3c2056bce601 152 SUPERFAMILY SSF48452 74 134 1.14E-6 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SHALO_0193 c5a82f6b3ffcc32492eb3145704cfd80 618 Pfam PF00361 Proton-conducting membrane transporter 132 420 3.0E-80 T 18-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0193 c5a82f6b3ffcc32492eb3145704cfd80 618 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 64 120 7.2E-24 T 18-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0193 c5a82f6b3ffcc32492eb3145704cfd80 618 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 261 283 2.1E-12 T 18-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 SHALO_0193 c5a82f6b3ffcc32492eb3145704cfd80 618 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 83 103 2.1E-12 T 18-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 SHALO_0193 c5a82f6b3ffcc32492eb3145704cfd80 618 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 35 54 2.1E-12 T 18-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 SHALO_0193 c5a82f6b3ffcc32492eb3145704cfd80 618 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 57 81 2.1E-12 T 18-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 SHALO_0193 c5a82f6b3ffcc32492eb3145704cfd80 618 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 412 434 2.1E-12 T 18-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 SHALO_0193 c5a82f6b3ffcc32492eb3145704cfd80 618 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 243 269 1.2E-62 T 18-10-2018 SHALO_0193 c5a82f6b3ffcc32492eb3145704cfd80 618 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 311 323 1.2E-62 T 18-10-2018 SHALO_0193 c5a82f6b3ffcc32492eb3145704cfd80 618 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 81 106 1.2E-62 T 18-10-2018 SHALO_0193 c5a82f6b3ffcc32492eb3145704cfd80 618 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 413 432 1.2E-62 T 18-10-2018 SHALO_0193 c5a82f6b3ffcc32492eb3145704cfd80 618 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 109 129 1.2E-62 T 18-10-2018 SHALO_0193 c5a82f6b3ffcc32492eb3145704cfd80 618 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 156 177 1.2E-62 T 18-10-2018 SHALO_0193 c5a82f6b3ffcc32492eb3145704cfd80 618 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 221 242 1.2E-62 T 18-10-2018 SHALO_0193 c5a82f6b3ffcc32492eb3145704cfd80 618 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 5 610 3.1E-224 T 18-10-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0054 7ec6aac47513ae8826a7291bc3e3b5ff 521 Gene3D G3DSA:3.30.565.10 33 247 7.0E-15 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_0054 7ec6aac47513ae8826a7291bc3e3b5ff 521 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 41 166 8.1E-29 T 18-10-2018 SHALO_0054 7ec6aac47513ae8826a7291bc3e3b5ff 521 SUPERFAMILY SSF55874 24 144 3.7E-15 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_2319 5897e1daff92bd87017ddb76661b35a6 497 Gene3D G3DSA:3.10.105.10 258 466 8.5E-134 T 18-10-2018 SHALO_2319 5897e1daff92bd87017ddb76661b35a6 497 SUPERFAMILY SSF53850 18 495 8.69E-125 T 18-10-2018 SHALO_2319 5897e1daff92bd87017ddb76661b35a6 497 Gene3D G3DSA:3.90.76.10 49 163 8.5E-134 T 18-10-2018 SHALO_2319 5897e1daff92bd87017ddb76661b35a6 497 PIRSF PIRSF002741 14 497 1.2E-124 T 18-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 SHALO_2319 5897e1daff92bd87017ddb76661b35a6 497 Gene3D G3DSA:3.40.190.10 28 478 8.5E-134 T 18-10-2018 SHALO_2319 5897e1daff92bd87017ddb76661b35a6 497 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 61 408 4.4E-76 T 18-10-2018 IPR000914 Solute-binding protein family 5 domain SHALO_2051 e0cfff0bbd21a6c25f21fd7d3145254b 848 SUPERFAMILY SSF50447 447 538 1.55E-12 T 18-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily SHALO_2051 e0cfff0bbd21a6c25f21fd7d3145254b 848 SUPERFAMILY SSF101353 240 451 5.36E-59 T 18-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 SHALO_2051 e0cfff0bbd21a6c25f21fd7d3145254b 848 Pfam PF01411 tRNA synthetases class II (A) 2 540 4.0E-202 T 18-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 SHALO_2051 e0cfff0bbd21a6c25f21fd7d3145254b 848 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 638 681 5.2E-18 T 18-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 SHALO_2051 e0cfff0bbd21a6c25f21fd7d3145254b 848 Pfam PF02272 DHHA1 domain 717 840 1.5E-16 T 18-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 SHALO_2051 e0cfff0bbd21a6c25f21fd7d3145254b 848 Gene3D G3DSA:3.30.930.10 1 235 2.3E-105 T 18-10-2018 SHALO_2051 e0cfff0bbd21a6c25f21fd7d3145254b 848 SUPERFAMILY SSF55186 542 700 3.79E-48 T 18-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 SHALO_2051 e0cfff0bbd21a6c25f21fd7d3145254b 848 Gene3D G3DSA:3.10.310.40 742 844 5.3E-23 T 18-10-2018 SHALO_2051 e0cfff0bbd21a6c25f21fd7d3145254b 848 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 846 165.583 T 18-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 SHALO_2051 e0cfff0bbd21a6c25f21fd7d3145254b 848 SUPERFAMILY SSF55681 2 239 1.74E-100 T 18-10-2018 SHALO_2051 e0cfff0bbd21a6c25f21fd7d3145254b 848 Gene3D G3DSA:3.30.54.20 609 662 1.7E-49 T 18-10-2018 SHALO_2051 e0cfff0bbd21a6c25f21fd7d3145254b 848 Gene3D G3DSA:3.30.980.10 547 682 1.7E-49 T 18-10-2018 SHALO_2051 e0cfff0bbd21a6c25f21fd7d3145254b 848 PRINTS PR00980 Alanyl-tRNA synthetase signature 220 233 6.6E-31 T 18-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 SHALO_2051 e0cfff0bbd21a6c25f21fd7d3145254b 848 PRINTS PR00980 Alanyl-tRNA synthetase signature 268 284 6.6E-31 T 18-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 SHALO_2051 e0cfff0bbd21a6c25f21fd7d3145254b 848 PRINTS PR00980 Alanyl-tRNA synthetase signature 292 305 6.6E-31 T 18-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 SHALO_2051 e0cfff0bbd21a6c25f21fd7d3145254b 848 PRINTS PR00980 Alanyl-tRNA synthetase signature 193 204 6.6E-31 T 18-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 SHALO_2051 e0cfff0bbd21a6c25f21fd7d3145254b 848 PRINTS PR00980 Alanyl-tRNA synthetase signature 71 82 6.6E-31 T 18-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 SHALO_2051 e0cfff0bbd21a6c25f21fd7d3145254b 848 Gene3D G3DSA:2.40.30.130 467 538 8.1E-8 T 18-10-2018 SHALO_2051 e0cfff0bbd21a6c25f21fd7d3145254b 848 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 2 825 3.0E-285 T 18-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 SHALO_2051 e0cfff0bbd21a6c25f21fd7d3145254b 848 SMART SM00863 638 681 3.5E-20 T 18-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 SHALO_0834 aab8f9ca4335c21cbbe527f45c03e416 1182 SMART SM00481 7 74 3.8E-32 T 18-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal SHALO_0834 aab8f9ca4335c21cbbe527f45c03e416 1182 Gene3D G3DSA:1.10.150.870 790 914 1.3E-6 T 18-10-2018 SHALO_0834 aab8f9ca4335c21cbbe527f45c03e416 1182 Pfam PF14579 Helix-hairpin-helix motif 833 926 4.9E-22 T 18-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHALO_0834 aab8f9ca4335c21cbbe527f45c03e416 1182 Gene3D G3DSA:3.20.20.140 1 283 1.5E-102 T 18-10-2018 SHALO_0834 aab8f9ca4335c21cbbe527f45c03e416 1182 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 319 759 1.4E-173 T 18-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHALO_0834 aab8f9ca4335c21cbbe527f45c03e416 1182 Gene3D G3DSA:1.10.10.1600 451 540 4.6E-24 T 18-10-2018 SHALO_0834 aab8f9ca4335c21cbbe527f45c03e416 1182 SUPERFAMILY SSF89550 7 277 3.34E-34 T 18-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 SHALO_0834 aab8f9ca4335c21cbbe527f45c03e416 1182 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1057 0.0 T 18-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHALO_0834 aab8f9ca4335c21cbbe527f45c03e416 1182 Pfam PF02811 PHP domain 8 187 5.4E-51 T 18-10-2018 IPR004013 PHP domain GO:0003824 SHALO_0362 dab5d0381c6173ffaa7f5bebb9c5ee34 421 Pfam PF00033 Cytochrome b/b6/petB 29 215 9.4E-58 T 18-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 SHALO_0362 dab5d0381c6173ffaa7f5bebb9c5ee34 421 SUPERFAMILY SSF81648 243 389 1.31E-33 T 18-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 SHALO_0362 dab5d0381c6173ffaa7f5bebb9c5ee34 421 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 287 396 7.8E-26 T 18-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 SHALO_0362 dab5d0381c6173ffaa7f5bebb9c5ee34 421 SUPERFAMILY SSF81342 12 289 5.49E-82 T 18-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 SHALO_0362 dab5d0381c6173ffaa7f5bebb9c5ee34 421 Gene3D G3DSA:1.20.810.10 2 419 2.3E-130 T 18-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 SHALO_0121 86b694fa21c60c234bfc43da4bf5b8c4 481 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 127 141 2.1E-13 T 18-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHALO_0121 86b694fa21c60c234bfc43da4bf5b8c4 481 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 210 229 2.1E-13 T 18-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHALO_0121 86b694fa21c60c234bfc43da4bf5b8c4 481 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 270 285 2.1E-13 T 18-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHALO_0121 86b694fa21c60c234bfc43da4bf5b8c4 481 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 35 478 41.182 T 18-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHALO_0121 86b694fa21c60c234bfc43da4bf5b8c4 481 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 128 137 - T 18-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHALO_0121 86b694fa21c60c234bfc43da4bf5b8c4 481 Gene3D G3DSA:3.40.120.10 293 376 5.9E-66 T 18-10-2018 SHALO_0121 86b694fa21c60c234bfc43da4bf5b8c4 481 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 37 168 1.2E-41 T 18-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHALO_0121 86b694fa21c60c234bfc43da4bf5b8c4 481 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 39 472 2.8E-156 T 18-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHALO_0121 86b694fa21c60c234bfc43da4bf5b8c4 481 SUPERFAMILY SSF53738 295 402 9.81E-26 T 18-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHALO_0121 86b694fa21c60c234bfc43da4bf5b8c4 481 Gene3D G3DSA:3.40.120.10 210 399 5.9E-66 T 18-10-2018 SHALO_0121 86b694fa21c60c234bfc43da4bf5b8c4 481 SUPERFAMILY SSF53738 30 216 1.74E-44 T 18-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHALO_0121 86b694fa21c60c234bfc43da4bf5b8c4 481 SUPERFAMILY SSF53738 192 292 2.24E-28 T 18-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHALO_0121 86b694fa21c60c234bfc43da4bf5b8c4 481 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 439 470 5.4E-6 T 18-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHALO_0121 86b694fa21c60c234bfc43da4bf5b8c4 481 Gene3D G3DSA:3.30.310.50 407 481 1.3E-12 T 18-10-2018 SHALO_0121 86b694fa21c60c234bfc43da4bf5b8c4 481 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 193 290 1.6E-21 T 18-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHALO_0121 86b694fa21c60c234bfc43da4bf5b8c4 481 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 295 401 3.0E-28 T 18-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHALO_0121 86b694fa21c60c234bfc43da4bf5b8c4 481 SUPERFAMILY SSF55957 394 480 2.09E-14 T 18-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHALO_0121 86b694fa21c60c234bfc43da4bf5b8c4 481 Gene3D G3DSA:3.40.120.10 36 183 3.0E-44 T 18-10-2018 SHALO_2202 8f4cd077be88ca0da3eb7b7d6d0bac48 244 Pfam PF01066 CDP-alcohol phosphatidyltransferase 16 79 3.4E-14 T 18-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 SHALO_2202 8f4cd077be88ca0da3eb7b7d6d0bac48 244 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 57 79 - T 18-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 SHALO_2202 8f4cd077be88ca0da3eb7b7d6d0bac48 244 Gene3D G3DSA:1.20.120.1760 8 134 2.8E-16 T 18-10-2018 SHALO_2202 8f4cd077be88ca0da3eb7b7d6d0bac48 244 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 21 183 4.3E-47 T 18-10-2018 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 SHALO_0215 adfad9521c7b18fe23f814ed083661d3 108 Pfam PF02021 Uncharacterised protein family UPF0102 9 95 1.3E-20 T 18-10-2018 IPR003509 Uncharacterised protein family UPF0102 SHALO_0215 adfad9521c7b18fe23f814ed083661d3 108 SUPERFAMILY SSF52980 8 103 1.29E-21 T 18-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 SHALO_0215 adfad9521c7b18fe23f814ed083661d3 108 Gene3D G3DSA:3.40.1350.10 8 107 2.4E-24 T 18-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 SHALO_0215 adfad9521c7b18fe23f814ed083661d3 108 Hamap MF_00048 UPF0102 protein YraN [yraN]. 2 108 17.571 T 18-10-2018 IPR003509 Uncharacterised protein family UPF0102 SHALO_1949 4c30e697db14ea8db0a3c737d47eb0f9 618 SUPERFAMILY SSF88659 456 529 4.19E-16 T 18-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like SHALO_1949 4c30e697db14ea8db0a3c737d47eb0f9 618 Pfam PF04542 Sigma-70 region 2 385 452 4.4E-21 T 18-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 SHALO_1949 4c30e697db14ea8db0a3c737d47eb0f9 618 Pfam PF04545 Sigma-70, region 4 551 605 9.1E-20 T 18-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 SHALO_1949 4c30e697db14ea8db0a3c737d47eb0f9 618 Gene3D G3DSA:1.10.10.10 533 618 1.8E-30 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_1949 4c30e697db14ea8db0a3c737d47eb0f9 618 Pfam PF04539 Sigma-70 region 3 462 537 4.7E-22 T 18-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 SHALO_1949 4c30e697db14ea8db0a3c737d47eb0f9 618 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 380 616 8.5E-115 T 18-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 SHALO_1949 4c30e697db14ea8db0a3c737d47eb0f9 618 SUPERFAMILY SSF88946 121 450 1.88E-62 T 18-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 SHALO_1949 4c30e697db14ea8db0a3c737d47eb0f9 618 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 5 617 35.843 T 18-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 SHALO_1949 4c30e697db14ea8db0a3c737d47eb0f9 618 SUPERFAMILY SSF88659 514 615 6.17E-26 T 18-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like SHALO_1949 4c30e697db14ea8db0a3c737d47eb0f9 618 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 382 605 6.4E-41 T 18-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 SHALO_1949 4c30e697db14ea8db0a3c737d47eb0f9 618 Gene3D G3DSA:1.10.10.10 456 531 3.0E-25 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_1949 4c30e697db14ea8db0a3c737d47eb0f9 618 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 577 603 - T 18-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 SHALO_1949 4c30e697db14ea8db0a3c737d47eb0f9 618 Pfam PF00140 Sigma-70 factor, region 1.2 105 136 2.1E-12 T 18-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHALO_1949 4c30e697db14ea8db0a3c737d47eb0f9 618 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 407 420 - T 18-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 SHALO_1949 4c30e697db14ea8db0a3c737d47eb0f9 618 PRINTS PR00046 Major sigma-70 factor signature 577 592 2.2E-29 T 18-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 SHALO_1949 4c30e697db14ea8db0a3c737d47eb0f9 618 PRINTS PR00046 Major sigma-70 factor signature 592 603 2.2E-29 T 18-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 SHALO_1949 4c30e697db14ea8db0a3c737d47eb0f9 618 PRINTS PR00046 Major sigma-70 factor signature 407 420 2.2E-29 T 18-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 SHALO_1949 4c30e697db14ea8db0a3c737d47eb0f9 618 PRINTS PR00046 Major sigma-70 factor signature 555 567 2.2E-29 T 18-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 SHALO_1949 4c30e697db14ea8db0a3c737d47eb0f9 618 PRINTS PR00046 Major sigma-70 factor signature 431 439 2.2E-29 T 18-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 SHALO_1957 fe37628a896032a9bc8430237921d96c 104 Pfam PF04341 Protein of unknown function, DUF485 10 98 1.4E-35 T 18-10-2018 IPR007436 Protein of unknown function DUF485 SHALO_0475 dfb97cc39aba8e4e3b929808ec66415d 141 Gene3D G3DSA:3.30.1550.10 2 71 2.4E-33 T 18-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily SHALO_0475 dfb97cc39aba8e4e3b929808ec66415d 141 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 6.8E-60 T 18-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_0475 dfb97cc39aba8e4e3b929808ec66415d 141 SUPERFAMILY SSF46906 67 139 1.22E-21 T 18-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily SHALO_0475 dfb97cc39aba8e4e3b929808ec66415d 141 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 73 4.0E-15 T 18-10-2018 SHALO_0475 dfb97cc39aba8e4e3b929808ec66415d 141 SMART SM00649 9 140 8.9E-76 T 18-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 SHALO_0475 dfb97cc39aba8e4e3b929808ec66415d 141 Gene3D G3DSA:1.10.10.250 72 139 4.2E-22 T 18-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily SHALO_0475 dfb97cc39aba8e4e3b929808ec66415d 141 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 141 28.742 T 18-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 SHALO_0475 dfb97cc39aba8e4e3b929808ec66415d 141 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 66 7.5E-30 T 18-10-2018 IPR020784 Ribosomal protein L11, N-terminal SHALO_0475 dfb97cc39aba8e4e3b929808ec66415d 141 Pfam PF00298 Ribosomal protein L11, RNA binding domain 71 139 7.1E-19 T 18-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 SHALO_0475 dfb97cc39aba8e4e3b929808ec66415d 141 ProSitePatterns PS00359 Ribosomal protein L11 signature. 126 141 - T 18-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_0475 dfb97cc39aba8e4e3b929808ec66415d 141 SUPERFAMILY SSF54747 3 71 1.31E-29 T 18-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily SHALO_2888 269911e42dbe367a9098c463ad0f7538 265 Pfam PF12849 PBP superfamily domain 18 252 4.4E-30 T 18-10-2018 IPR024370 PBP domain SHALO_2888 269911e42dbe367a9098c463ad0f7538 265 Gene3D G3DSA:3.40.190.10 94 227 1.7E-57 T 18-10-2018 SHALO_2888 269911e42dbe367a9098c463ad0f7538 265 Gene3D G3DSA:3.40.190.10 23 257 1.7E-57 T 18-10-2018 SHALO_2888 269911e42dbe367a9098c463ad0f7538 265 SUPERFAMILY SSF53850 19 259 1.06E-47 T 18-10-2018 SHALO_0985 a74443a5e515adcac60550d7c5e01630 438 Pfam PF00682 HMGL-like 32 309 2.3E-70 T 18-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 SHALO_0985 a74443a5e515adcac60550d7c5e01630 438 SUPERFAMILY SSF89000 388 434 3.92E-8 T 18-10-2018 SHALO_0985 a74443a5e515adcac60550d7c5e01630 438 Gene3D G3DSA:3.30.160.270 377 436 1.1E-14 T 18-10-2018 SHALO_0985 a74443a5e515adcac60550d7c5e01630 438 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 39 55 - T 18-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 SHALO_0985 a74443a5e515adcac60550d7c5e01630 438 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 241 254 - T 18-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 SHALO_0985 a74443a5e515adcac60550d7c5e01630 438 Gene3D G3DSA:3.20.20.70 11 376 5.2E-134 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_0985 a74443a5e515adcac60550d7c5e01630 438 SUPERFAMILY SSF51569 22 328 9.89E-87 T 18-10-2018 SHALO_2603 593a67f15cff902fe1c9b660e57435ff 468 Gene3D G3DSA:1.10.275.10 1 139 1.4E-55 T 18-10-2018 IPR024083 Fumarase/histidase, N-terminal SHALO_2603 593a67f15cff902fe1c9b660e57435ff 468 Pfam PF10415 Fumarase C C-terminus 408 460 1.8E-20 T 18-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 SHALO_2603 593a67f15cff902fe1c9b660e57435ff 468 PRINTS PR00145 Argininosuccinate lyase family signature 175 195 1.0E-5 T 18-10-2018 SHALO_2603 593a67f15cff902fe1c9b660e57435ff 468 PRINTS PR00145 Argininosuccinate lyase family signature 317 333 1.0E-5 T 18-10-2018 SHALO_2603 593a67f15cff902fe1c9b660e57435ff 468 PRINTS PR00145 Argininosuccinate lyase family signature 134 156 1.0E-5 T 18-10-2018 SHALO_2603 593a67f15cff902fe1c9b660e57435ff 468 PRINTS PR00149 Fumarate lyase superfamily signature 180 198 3.4E-29 T 18-10-2018 IPR000362 Fumarate lyase family SHALO_2603 593a67f15cff902fe1c9b660e57435ff 468 PRINTS PR00149 Fumarate lyase superfamily signature 317 333 3.4E-29 T 18-10-2018 IPR000362 Fumarate lyase family SHALO_2603 593a67f15cff902fe1c9b660e57435ff 468 PRINTS PR00149 Fumarate lyase superfamily signature 135 153 3.4E-29 T 18-10-2018 IPR000362 Fumarate lyase family SHALO_2603 593a67f15cff902fe1c9b660e57435ff 468 PRINTS PR00149 Fumarate lyase superfamily signature 271 298 3.4E-29 T 18-10-2018 IPR000362 Fumarate lyase family SHALO_2603 593a67f15cff902fe1c9b660e57435ff 468 Pfam PF00206 Lyase 14 342 2.4E-97 T 18-10-2018 IPR022761 Fumarate lyase, N-terminal SHALO_2603 593a67f15cff902fe1c9b660e57435ff 468 Gene3D G3DSA:1.10.40.30 408 456 4.6E-21 T 18-10-2018 SHALO_2603 593a67f15cff902fe1c9b660e57435ff 468 Gene3D G3DSA:1.20.200.10 140 407 1.2E-109 T 18-10-2018 SHALO_2603 593a67f15cff902fe1c9b660e57435ff 468 SUPERFAMILY SSF48557 3 460 1.05E-142 T 18-10-2018 IPR008948 L-Aspartase-like GO:0003824 SHALO_2603 593a67f15cff902fe1c9b660e57435ff 468 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 4 466 2.6E-228 T 18-10-2018 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 SHALO_2603 593a67f15cff902fe1c9b660e57435ff 468 ProSitePatterns PS00163 Fumarate lyases signature. 317 326 - T 18-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 SHALO_0042 bacc06b89a76d109826c6b591349d61c 896 SUPERFAMILY SSF48371 210 595 1.55E-5 T 18-10-2018 IPR016024 Armadillo-type fold SHALO_0042 bacc06b89a76d109826c6b591349d61c 896 SUPERFAMILY SSF48371 494 686 1.09E-18 T 18-10-2018 IPR016024 Armadillo-type fold SHALO_0042 bacc06b89a76d109826c6b591349d61c 896 Gene3D G3DSA:1.25.10.10 451 615 7.2E-26 T 18-10-2018 IPR011989 Armadillo-like helical SHALO_0042 bacc06b89a76d109826c6b591349d61c 896 Gene3D G3DSA:1.25.10.10 616 818 3.0E-26 T 18-10-2018 IPR011989 Armadillo-like helical SHALO_1256 8f527f3e671ca49691272ce011e8c7ab 713 Gene3D G3DSA:1.10.287.950 381 713 3.8E-61 T 18-10-2018 SHALO_1256 8f527f3e671ca49691272ce011e8c7ab 713 Gene3D G3DSA:3.30.450.20 73 237 8.1E-53 T 18-10-2018 SHALO_1256 8f527f3e671ca49691272ce011e8c7ab 713 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 521 648 6.4E-33 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_1256 8f527f3e671ca49691272ce011e8c7ab 713 SUPERFAMILY SSF58104 404 713 1.7E-59 T 18-10-2018 SHALO_1256 8f527f3e671ca49691272ce011e8c7ab 713 SMART SM00304 382 436 3.6E-8 T 18-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 SHALO_1256 8f527f3e671ca49691272ce011e8c7ab 713 Pfam PF02743 Cache domain 53 332 1.3E-22 T 18-10-2018 IPR033479 Double Cache domain 1 SHALO_1256 8f527f3e671ca49691272ce011e8c7ab 713 SMART SM00283 458 712 1.2E-47 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_1256 8f527f3e671ca49691272ce011e8c7ab 713 Gene3D G3DSA:3.30.450.20 64 341 8.1E-53 T 18-10-2018 SHALO_2192 77f6a84758bd4396939b52802ea67a14 696 Pfam PF03781 Sulfatase-modifying factor enzyme 1 215 446 7.6E-26 T 18-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 SHALO_2192 77f6a84758bd4396939b52802ea67a14 696 Gene3D G3DSA:3.40.50.150 457 641 2.9E-19 T 18-10-2018 SHALO_2192 77f6a84758bd4396939b52802ea67a14 696 Pfam PF12867 DinB superfamily 29 162 1.8E-6 T 18-10-2018 IPR024775 DinB-like domain SHALO_2192 77f6a84758bd4396939b52802ea67a14 696 SUPERFAMILY SSF56436 191 447 6.59E-55 T 18-10-2018 IPR016187 C-type lectin fold SHALO_2192 77f6a84758bd4396939b52802ea67a14 696 TIGRFAM TIGR04344 ovoA_Nterm: 5-histidylcysteine sulfoxide synthase 8 446 3.5E-214 T 18-10-2018 IPR027577 5-histidylcysteine sulfoxide synthase SHALO_2192 77f6a84758bd4396939b52802ea67a14 696 TIGRFAM TIGR04345 ovoA_Cterm: putative 4-mercaptohistidine N1-methyltranferase 459 695 8.0E-83 T 18-10-2018 IPR027625 Putative 4-mercaptohistidine N1-methyltranferase, OvoA C-terminal domain SHALO_2192 77f6a84758bd4396939b52802ea67a14 696 Gene3D G3DSA:3.90.1580.10 182 456 6.4E-23 T 18-10-2018 SHALO_2192 77f6a84758bd4396939b52802ea67a14 696 Pfam PF08241 Methyltransferase domain 499 622 5.0E-9 T 18-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 SHALO_2192 77f6a84758bd4396939b52802ea67a14 696 SUPERFAMILY SSF53335 479 647 3.44E-20 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_2991 92205ca09b4df229a996e9c8e06845dc 385 Pfam PF00581 Rhodanese-like domain 40 123 7.4E-11 T 18-10-2018 IPR001763 Rhodanese-like domain SHALO_2991 92205ca09b4df229a996e9c8e06845dc 385 Pfam PF00581 Rhodanese-like domain 136 225 9.7E-11 T 18-10-2018 IPR001763 Rhodanese-like domain SHALO_2991 92205ca09b4df229a996e9c8e06845dc 385 Pfam PF00581 Rhodanese-like domain 264 338 1.5E-10 T 18-10-2018 IPR001763 Rhodanese-like domain SHALO_2991 92205ca09b4df229a996e9c8e06845dc 385 SUPERFAMILY SSF52821 137 233 2.23E-19 T 18-10-2018 IPR036873 Rhodanese-like domain superfamily SHALO_2991 92205ca09b4df229a996e9c8e06845dc 385 Gene3D G3DSA:3.40.250.10 132 233 1.4E-17 T 18-10-2018 IPR036873 Rhodanese-like domain superfamily SHALO_2991 92205ca09b4df229a996e9c8e06845dc 385 SUPERFAMILY SSF52821 258 339 3.14E-18 T 18-10-2018 IPR036873 Rhodanese-like domain superfamily SHALO_2991 92205ca09b4df229a996e9c8e06845dc 385 Gene3D G3DSA:3.40.250.10 33 129 3.3E-17 T 18-10-2018 IPR036873 Rhodanese-like domain superfamily SHALO_2991 92205ca09b4df229a996e9c8e06845dc 385 Gene3D G3DSA:3.40.250.10 270 357 8.6E-17 T 18-10-2018 IPR036873 Rhodanese-like domain superfamily SHALO_2991 92205ca09b4df229a996e9c8e06845dc 385 SUPERFAMILY SSF52821 36 126 1.06E-17 T 18-10-2018 IPR036873 Rhodanese-like domain superfamily SHALO_2991 92205ca09b4df229a996e9c8e06845dc 385 SMART SM00450 260 357 6.1E-8 T 18-10-2018 IPR001763 Rhodanese-like domain SHALO_2991 92205ca09b4df229a996e9c8e06845dc 385 SMART SM00450 27 127 1.8E-13 T 18-10-2018 IPR001763 Rhodanese-like domain SHALO_2991 92205ca09b4df229a996e9c8e06845dc 385 SMART SM00450 129 228 1.4E-9 T 18-10-2018 IPR001763 Rhodanese-like domain SHALO_1725 12d991c5cebbb6fe9c4cb553ea3b99c6 287 Gene3D G3DSA:2.40.30.30 158 284 5.2E-27 T 18-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 SHALO_1725 12d991c5cebbb6fe9c4cb553ea3b99c6 287 Gene3D G3DSA:3.40.50.620 2 43 2.7E-5 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_1725 12d991c5cebbb6fe9c4cb553ea3b99c6 287 Gene3D G3DSA:3.40.50.620 58 157 4.3E-22 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_1725 12d991c5cebbb6fe9c4cb553ea3b99c6 287 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 15 276 1.3E-61 T 18-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 SHALO_1725 12d991c5cebbb6fe9c4cb553ea3b99c6 287 Pfam PF01687 Riboflavin kinase 156 276 1.9E-26 T 18-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 SHALO_1725 12d991c5cebbb6fe9c4cb553ea3b99c6 287 SUPERFAMILY SSF52374 16 158 1.16E-16 T 18-10-2018 SHALO_1725 12d991c5cebbb6fe9c4cb553ea3b99c6 287 SUPERFAMILY SSF82114 145 278 2.62E-32 T 18-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 SHALO_1725 12d991c5cebbb6fe9c4cb553ea3b99c6 287 SMART SM00904 155 277 3.1E-39 T 18-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 SHALO_1725 12d991c5cebbb6fe9c4cb553ea3b99c6 287 PIRSF PIRSF004491 56 280 9.8E-57 T 18-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 SHALO_1725 12d991c5cebbb6fe9c4cb553ea3b99c6 287 PIRSF PIRSF004491 2 42 4.4E-7 T 18-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 SHALO_1725 12d991c5cebbb6fe9c4cb553ea3b99c6 287 Pfam PF06574 FAD synthetase 14 36 1.3E-5 T 18-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 SHALO_1725 12d991c5cebbb6fe9c4cb553ea3b99c6 287 Pfam PF06574 FAD synthetase 72 138 8.6E-7 T 18-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 SHALO_2879 05571eb63d88b8b83877efd15b260812 238 Gene3D G3DSA:2.50.20.10 15 233 2.6E-39 T 18-10-2018 SHALO_2879 05571eb63d88b8b83877efd15b260812 238 Pfam PF17131 Outer membrane lipoprotein-sorting protein 59 230 2.3E-38 T 18-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein SHALO_1934 b38c1900580c92dcbc1e80e2dd00839c 367 SUPERFAMILY SSF81342 1 186 6.98E-28 T 18-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 SHALO_1934 b38c1900580c92dcbc1e80e2dd00839c 367 SUPERFAMILY SSF48695 233 355 8.95E-5 T 18-10-2018 IPR036280 Multiheme cytochrome superfamily SHALO_1934 b38c1900580c92dcbc1e80e2dd00839c 367 Pfam PF09626 Dihaem cytochrome c 240 357 2.9E-35 T 18-10-2018 IPR018588 Dihaem cytochrome c SHALO_1934 b38c1900580c92dcbc1e80e2dd00839c 367 Gene3D G3DSA:1.20.950.20 1 170 6.9E-13 T 18-10-2018 SHALO_1934 b38c1900580c92dcbc1e80e2dd00839c 367 Pfam PF01292 Prokaryotic cytochrome b561 7 181 8.8E-22 T 18-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 SHALO_2871 cfd819cdc697a21a5aef2828d7b0895a 146 Gene3D G3DSA:3.40.30.10 40 144 1.1E-15 T 18-10-2018 SHALO_2871 cfd819cdc697a21a5aef2828d7b0895a 146 SUPERFAMILY SSF52833 56 141 4.91E-16 T 18-10-2018 IPR036249 Thioredoxin-like superfamily SHALO_2871 cfd819cdc697a21a5aef2828d7b0895a 146 Pfam PF00085 Thioredoxin 55 141 5.7E-9 T 18-10-2018 IPR013766 Thioredoxin domain GO:0045454 SHALO_2544 71ba693b0b6366980d64a50f7ea64988 315 Gene3D G3DSA:3.40.190.10 54 271 5.1E-49 T 18-10-2018 SHALO_2544 71ba693b0b6366980d64a50f7ea64988 315 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 5 270 4.9E-76 T 18-10-2018 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 SHALO_2544 71ba693b0b6366980d64a50f7ea64988 315 Gene3D G3DSA:3.40.190.10 137 245 5.1E-49 T 18-10-2018 SHALO_2544 71ba693b0b6366980d64a50f7ea64988 315 SMART SM00062 51 284 0.0075 T 18-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SHALO_2544 71ba693b0b6366980d64a50f7ea64988 315 SUPERFAMILY SSF53850 51 310 7.86E-46 T 18-10-2018 SHALO_2544 71ba693b0b6366980d64a50f7ea64988 315 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 54 292 2.3E-53 T 18-10-2018 SHALO_2410 03a66dd9669ef244a15d2f0d95a8bbe0 337 SUPERFAMILY SSF56553 53 173 4.84E-29 T 18-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_2410 03a66dd9669ef244a15d2f0d95a8bbe0 337 Gene3D G3DSA:1.10.150.20 216 337 6.9E-28 T 18-10-2018 SHALO_2410 03a66dd9669ef244a15d2f0d95a8bbe0 337 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 62 155 1.2E-16 T 18-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_2410 03a66dd9669ef244a15d2f0d95a8bbe0 337 SUPERFAMILY SSF55257 10 227 6.93E-21 T 18-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_2410 03a66dd9669ef244a15d2f0d95a8bbe0 337 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 1 314 29.331 T 18-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_2410 03a66dd9669ef244a15d2f0d95a8bbe0 337 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 25 312 6.8E-87 T 18-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_2410 03a66dd9669ef244a15d2f0d95a8bbe0 337 Gene3D G3DSA:2.170.120.12 53 172 9.0E-68 T 18-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_2410 03a66dd9669ef244a15d2f0d95a8bbe0 337 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 254 318 4.0E-9 T 18-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_2410 03a66dd9669ef244a15d2f0d95a8bbe0 337 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 243 306 8.6E-23 T 18-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_2410 03a66dd9669ef244a15d2f0d95a8bbe0 337 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 30 220 1.6E-12 T 18-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_2410 03a66dd9669ef244a15d2f0d95a8bbe0 337 SMART SM00662 23 229 2.1E-55 T 18-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_2410 03a66dd9669ef244a15d2f0d95a8bbe0 337 SUPERFAMILY SSF47789 249 317 9.29E-20 T 18-10-2018 SHALO_2410 03a66dd9669ef244a15d2f0d95a8bbe0 337 Gene3D G3DSA:3.30.1360.10 16 214 9.0E-68 T 18-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_1886 4f69f45ab9483ccecff09723588a891f 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 18-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 SHALO_1886 4f69f45ab9483ccecff09723588a891f 112 Gene3D G3DSA:3.30.70.120 1 112 2.0E-46 T 18-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal SHALO_1886 4f69f45ab9483ccecff09723588a891f 112 PRINTS PR00340 P-II protein signature 52 75 3.8E-42 T 18-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SHALO_1886 4f69f45ab9483ccecff09723588a891f 112 PRINTS PR00340 P-II protein signature 2 17 3.8E-42 T 18-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SHALO_1886 4f69f45ab9483ccecff09723588a891f 112 PRINTS PR00340 P-II protein signature 23 41 3.8E-42 T 18-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SHALO_1886 4f69f45ab9483ccecff09723588a891f 112 PRINTS PR00340 P-II protein signature 83 103 3.8E-42 T 18-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SHALO_1886 4f69f45ab9483ccecff09723588a891f 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.1E-42 T 18-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SHALO_1886 4f69f45ab9483ccecff09723588a891f 112 SUPERFAMILY SSF54913 1 112 3.18E-45 T 18-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta SHALO_1886 4f69f45ab9483ccecff09723588a891f 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 18-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 SHALO_1886 4f69f45ab9483ccecff09723588a891f 112 SMART SM00938 4 105 3.3E-66 T 18-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SHALO_1886 4f69f45ab9483ccecff09723588a891f 112 PIRSF PIRSF039144 1 112 5.4E-55 T 18-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SHALO_2598 2f8247ff6e0ff9b647d026e37bd6db29 701 Pfam PF01618 MotA/TolQ/ExbB proton channel family 103 196 5.2E-5 T 18-10-2018 IPR002898 MotA/TolQ/ExbB proton channel SHALO_2035 328317614c324283830efb9bf2ae9115 242 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 88 102 - T 18-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHALO_2035 328317614c324283830efb9bf2ae9115 242 Pfam PF00849 RNA pseudouridylate synthase 80 195 8.0E-27 T 18-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHALO_2035 328317614c324283830efb9bf2ae9115 242 Gene3D G3DSA:3.30.2350.10 46 233 5.2E-48 T 18-10-2018 SHALO_2035 328317614c324283830efb9bf2ae9115 242 SUPERFAMILY SSF55120 53 239 1.3E-47 T 18-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHALO_1828 43fd5a260e6567269ebef548360e89a8 112 Pfam PF05656 Protein of unknown function (DUF805) 14 105 4.7E-24 T 18-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 SHALO_2757 593c8130feee2442cbab1b0e417b2058 381 SUPERFAMILY SSF51419 23 253 1.31E-43 T 18-10-2018 IPR029066 PLP-binding barrel SHALO_2757 593c8130feee2442cbab1b0e417b2058 381 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 146 338 1.1E-10 T 18-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 SHALO_2757 593c8130feee2442cbab1b0e417b2058 381 PIRSF PIRSF038941 4 381 7.6E-174 T 18-10-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 SHALO_2757 593c8130feee2442cbab1b0e417b2058 381 Gene3D G3DSA:2.40.37.10 14 377 1.7E-154 T 18-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 SHALO_2757 593c8130feee2442cbab1b0e417b2058 381 TIGRFAM TIGR01047 nspC: carboxynorspermidine decarboxylase 14 381 1.1E-164 T 18-10-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 SHALO_2757 593c8130feee2442cbab1b0e417b2058 381 Gene3D G3DSA:3.20.20.10 23 250 1.7E-154 T 18-10-2018 IPR029066 PLP-binding barrel SHALO_2757 593c8130feee2442cbab1b0e417b2058 381 SUPERFAMILY SSF50621 218 369 1.86E-31 T 18-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 SHALO_0821 96627c582570963532200d57a4fbe829 171 Pfam PF03653 Uncharacterised protein family (UPF0093) 2 144 2.8E-50 T 18-10-2018 IPR005265 Uncharacterised protein family UPF0093 SHALO_0821 96627c582570963532200d57a4fbe829 171 PIRSF PIRSF004638 1 147 2.8E-45 T 18-10-2018 IPR005265 Uncharacterised protein family UPF0093 SHALO_0821 96627c582570963532200d57a4fbe829 171 PIRSF PIRSF004638 150 166 1900.0 T 18-10-2018 IPR005265 Uncharacterised protein family UPF0093 SHALO_0821 96627c582570963532200d57a4fbe829 171 TIGRFAM TIGR00701 TIGR00701: TIGR00701 family protein 3 144 5.7E-43 T 18-10-2018 IPR005265 Uncharacterised protein family UPF0093 SHALO_2632 dd072687297d4a79dc21235b734f3197 431 SUPERFAMILY SSF100879 281 381 1.15E-6 T 18-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 SHALO_2632 dd072687297d4a79dc21235b734f3197 431 Gene3D G3DSA:3.30.70.270 120 277 3.7E-45 T 18-10-2018 SHALO_2632 dd072687297d4a79dc21235b734f3197 431 Pfam PF00817 impB/mucB/samB family 5 199 5.3E-42 T 18-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 SHALO_2632 dd072687297d4a79dc21235b734f3197 431 SUPERFAMILY SSF56672 1 278 8.9E-54 T 18-10-2018 SHALO_2632 dd072687297d4a79dc21235b734f3197 431 Gene3D G3DSA:3.30.1490.100 283 392 1.7E-5 T 18-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 SHALO_2632 dd072687297d4a79dc21235b734f3197 431 Gene3D G3DSA:1.10.150.20 220 270 3.7E-45 T 18-10-2018 SHALO_2632 dd072687297d4a79dc21235b734f3197 431 Gene3D G3DSA:2.30.40.20 10 51 3.4E-6 T 18-10-2018 SHALO_2632 dd072687297d4a79dc21235b734f3197 431 Gene3D G3DSA:2.30.40.20 83 119 3.7E-45 T 18-10-2018 SHALO_2894 a7ab63e79a7803c2b2dadab653bf2e73 210 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 207 8.8E-82 T 18-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 SHALO_2894 a7ab63e79a7803c2b2dadab653bf2e73 210 Pfam PF14681 Uracil phosphoribosyltransferase 6 207 4.1E-65 T 18-10-2018 SHALO_2894 a7ab63e79a7803c2b2dadab653bf2e73 210 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 3 208 42.341 T 18-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 SHALO_2894 a7ab63e79a7803c2b2dadab653bf2e73 210 Gene3D G3DSA:3.40.50.2020 1 207 2.4E-76 T 18-10-2018 SHALO_2894 a7ab63e79a7803c2b2dadab653bf2e73 210 SUPERFAMILY SSF53271 3 206 8.0E-65 T 18-10-2018 IPR029057 Phosphoribosyltransferase-like SHALO_1101 396a3539c8ec558d74747e1e777794a5 217 Pfam PF02163 Peptidase family M50 130 195 1.6E-6 T 18-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 SHALO_0218 1ec1a8de9f66735447f9b841d7b0f6f0 255 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 2 254 30.406 T 18-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 SHALO_0218 1ec1a8de9f66735447f9b841d7b0f6f0 255 PIRSF PIRSF000161 1 255 2.8E-77 T 18-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 SHALO_0218 1ec1a8de9f66735447f9b841d7b0f6f0 255 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 1 254 1.4E-71 T 18-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 SHALO_0218 1ec1a8de9f66735447f9b841d7b0f6f0 255 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 118 253 2.8E-39 T 18-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 SHALO_0218 1ec1a8de9f66735447f9b841d7b0f6f0 255 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 2 115 8.3E-21 T 18-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 SHALO_0218 1ec1a8de9f66735447f9b841d7b0f6f0 255 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 139 156 - T 18-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 SHALO_0218 1ec1a8de9f66735447f9b841d7b0f6f0 255 Gene3D G3DSA:3.40.50.720 5 253 1.3E-80 T 18-10-2018 SHALO_0218 1ec1a8de9f66735447f9b841d7b0f6f0 255 Gene3D G3DSA:3.30.360.10 117 223 1.3E-80 T 18-10-2018 SHALO_0218 1ec1a8de9f66735447f9b841d7b0f6f0 255 SUPERFAMILY SSF51735 1 255 1.32E-34 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_0218 1ec1a8de9f66735447f9b841d7b0f6f0 255 SUPERFAMILY SSF55347 117 225 8.94E-33 T 18-10-2018 SHALO_2851 b284db743f58f7cc8d97e77624680eb7 231 Gene3D G3DSA:3.40.50.620 2 231 9.6E-53 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_2851 b284db743f58f7cc8d97e77624680eb7 231 PIRSF PIRSF000857 1 231 1.0E-62 T 18-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 SHALO_2851 b284db743f58f7cc8d97e77624680eb7 231 SUPERFAMILY SSF52402 5 189 4.74E-32 T 18-10-2018 SHALO_2851 b284db743f58f7cc8d97e77624680eb7 231 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 28 201 6.8E-30 T 18-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 SHALO_0323 f28296d2ebbb2a203442957531880703 417 Pfam PF13742 OB-fold nucleic acid binding domain 5 97 4.7E-29 T 18-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 SHALO_0323 f28296d2ebbb2a203442957531880703 417 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 2 412 25.854 T 18-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 SHALO_0323 f28296d2ebbb2a203442957531880703 417 Pfam PF02601 Exonuclease VII, large subunit 121 386 3.1E-72 T 18-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 SHALO_0323 f28296d2ebbb2a203442957531880703 417 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 6 410 6.3E-127 T 18-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 SHALO_1487 3380998100d25bcebf06746c4d64110d 229 Gene3D G3DSA:1.10.10.10 133 228 1.9E-11 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_1487 3380998100d25bcebf06746c4d64110d 229 SMART SM00448 12 123 3.4E-24 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_1487 3380998100d25bcebf06746c4d64110d 229 SUPERFAMILY SSF52172 10 175 5.41E-32 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_1487 3380998100d25bcebf06746c4d64110d 229 Gene3D G3DSA:3.40.50.2300 5 132 9.1E-28 T 18-10-2018 SHALO_1487 3380998100d25bcebf06746c4d64110d 229 SMART SM00862 154 224 3.9E-5 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_1487 3380998100d25bcebf06746c4d64110d 229 Pfam PF00072 Response regulator receiver domain 14 123 8.5E-24 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_1487 3380998100d25bcebf06746c4d64110d 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 224 2.3E-6 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_0098 50462965a1e2323178a8b8855d54d52f 788 SUPERFAMILY SSF51998 213 770 3.89E-177 T 18-10-2018 SHALO_0098 50462965a1e2323178a8b8855d54d52f 788 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 139 769 2.7E-189 T 18-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 SHALO_0098 50462965a1e2323178a8b8855d54d52f 788 Pfam PF02867 Ribonucleotide reductase, barrel domain 214 765 1.5E-165 T 18-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 SHALO_0098 50462965a1e2323178a8b8855d54d52f 788 SUPERFAMILY SSF48168 7 212 1.83E-66 T 18-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 SHALO_0098 50462965a1e2323178a8b8855d54d52f 788 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 136 209 1.1E-24 T 18-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 SHALO_0098 50462965a1e2323178a8b8855d54d52f 788 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 638 660 - T 18-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 SHALO_0098 50462965a1e2323178a8b8855d54d52f 788 Pfam PF03477 ATP cone domain 3 88 6.7E-16 T 18-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 SHALO_0098 50462965a1e2323178a8b8855d54d52f 788 PRINTS PR01183 Ribonucleotide reductase large chain signature 546 568 5.5E-42 T 18-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 SHALO_0098 50462965a1e2323178a8b8855d54d52f 788 PRINTS PR01183 Ribonucleotide reductase large chain signature 289 308 5.5E-42 T 18-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 SHALO_0098 50462965a1e2323178a8b8855d54d52f 788 PRINTS PR01183 Ribonucleotide reductase large chain signature 508 531 5.5E-42 T 18-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 SHALO_0098 50462965a1e2323178a8b8855d54d52f 788 PRINTS PR01183 Ribonucleotide reductase large chain signature 574 597 5.5E-42 T 18-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 SHALO_0098 50462965a1e2323178a8b8855d54d52f 788 PRINTS PR01183 Ribonucleotide reductase large chain signature 649 676 5.5E-42 T 18-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 SHALO_0098 50462965a1e2323178a8b8855d54d52f 788 PRINTS PR01183 Ribonucleotide reductase large chain signature 420 431 5.5E-42 T 18-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 SHALO_2535 b971c886c1e5191cad7fd997fccb8f39 591 Pfam PF00664 ABC transporter transmembrane region 22 292 3.7E-22 T 18-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 SHALO_2535 b971c886c1e5191cad7fd997fccb8f39 591 SUPERFAMILY SSF90123 3 329 2.22E-45 T 18-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 SHALO_2535 b971c886c1e5191cad7fd997fccb8f39 591 Gene3D G3DSA:3.40.50.300 332 586 2.9E-85 T 18-10-2018 SHALO_2535 b971c886c1e5191cad7fd997fccb8f39 591 Gene3D G3DSA:1.20.1560.10 2 327 1.3E-38 T 18-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 SHALO_2535 b971c886c1e5191cad7fd997fccb8f39 591 Pfam PF00005 ABC transporter 358 506 2.9E-30 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_2535 b971c886c1e5191cad7fd997fccb8f39 591 ProSitePatterns PS00211 ABC transporters family signature. 478 492 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_2535 b971c886c1e5191cad7fd997fccb8f39 591 SMART SM00382 366 552 6.6E-14 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_2535 b971c886c1e5191cad7fd997fccb8f39 591 SUPERFAMILY SSF52540 332 574 8.56E-88 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_2700 71a837554ad4dc7643d326a5e4ea5b23 70 SMART SM00704 39 70 0.0039 T 18-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 SHALO_2700 71a837554ad4dc7643d326a5e4ea5b23 70 SMART SM00704 1 38 0.0011 T 18-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 SHALO_2700 71a837554ad4dc7643d326a5e4ea5b23 70 Pfam PF09360 Iron-binding zinc finger CDGSH type 48 68 4.5E-10 T 18-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 SHALO_2700 71a837554ad4dc7643d326a5e4ea5b23 70 Pfam PF09360 Iron-binding zinc finger CDGSH type 10 33 1.9E-6 T 18-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 SHALO_2700 71a837554ad4dc7643d326a5e4ea5b23 70 Gene3D G3DSA:3.40.5.90 1 70 4.7E-26 T 18-10-2018 SHALO_1733 2432e947b2b9441d82523e19e1823c6f 400 Gene3D G3DSA:3.30.70.260 253 398 2.3E-54 T 18-10-2018 SHALO_1733 2432e947b2b9441d82523e19e1823c6f 400 Pfam PF01842 ACT domain 264 325 5.3E-8 T 18-10-2018 IPR002912 ACT domain SHALO_1733 2432e947b2b9441d82523e19e1823c6f 400 SUPERFAMILY SSF53633 3 242 7.59E-75 T 18-10-2018 IPR036393 Acetylglutamate kinase-like superfamily SHALO_1733 2432e947b2b9441d82523e19e1823c6f 400 PIRSF PIRSF000726 53 400 1.7E-134 T 18-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 SHALO_1733 2432e947b2b9441d82523e19e1823c6f 400 PIRSF PIRSF000726 1 59 1.1E-21 T 18-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 SHALO_1733 2432e947b2b9441d82523e19e1823c6f 400 Pfam PF00696 Amino acid kinase family 1 224 3.7E-51 T 18-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 SHALO_1733 2432e947b2b9441d82523e19e1823c6f 400 Pfam PF13840 ACT domain 332 394 7.9E-12 T 18-10-2018 IPR027795 CASTOR, ACT domain SHALO_1733 2432e947b2b9441d82523e19e1823c6f 400 Gene3D G3DSA:3.40.1160.10 1 252 4.9E-87 T 18-10-2018 IPR036393 Acetylglutamate kinase-like superfamily SHALO_1733 2432e947b2b9441d82523e19e1823c6f 400 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 61 397 2.8E-121 T 18-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 SHALO_1733 2432e947b2b9441d82523e19e1823c6f 400 Gene3D G3DSA:3.30.70.260 259 333 2.3E-54 T 18-10-2018 SHALO_1733 2432e947b2b9441d82523e19e1823c6f 400 ProSitePatterns PS00324 Aspartokinase signature. 4 12 - T 18-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 SHALO_1733 2432e947b2b9441d82523e19e1823c6f 400 SUPERFAMILY SSF55021 246 324 5.12E-18 T 18-10-2018 SHALO_1733 2432e947b2b9441d82523e19e1823c6f 400 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 1 398 3.1E-140 T 18-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 SHALO_1733 2432e947b2b9441d82523e19e1823c6f 400 SUPERFAMILY SSF55021 329 399 4.2E-21 T 18-10-2018 SHALO_1478 a231d747f708d5e2fbd0c92bae197186 242 PIRSF PIRSF037208 2 241 8.6E-72 T 18-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 SHALO_1478 a231d747f708d5e2fbd0c92bae197186 242 SUPERFAMILY SSF55729 78 228 4.98E-23 T 18-10-2018 IPR016181 Acyl-CoA N-acyltransferase SHALO_1478 a231d747f708d5e2fbd0c92bae197186 242 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 17 85 3.9E-14 T 18-10-2018 IPR007471 N-end aminoacyl transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 SHALO_1478 a231d747f708d5e2fbd0c92bae197186 242 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 105 229 5.0E-29 T 18-10-2018 IPR007472 N-end rule aminoacyl transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 SHALO_1478 a231d747f708d5e2fbd0c92bae197186 242 Hamap MF_00689 Aspartate/glutamate leucyltransferase [bpt]. 6 235 34.986 T 18-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 SHALO_2190 92a0eff29ad1f128646c8e91b5e9132d 154 Gene3D G3DSA:3.40.50.960 1 154 4.1E-54 T 18-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 SHALO_2190 92a0eff29ad1f128646c8e91b5e9132d 154 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 15 151 2.9E-51 T 18-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 SHALO_2190 92a0eff29ad1f128646c8e91b5e9132d 154 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 9 154 29.629 T 18-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 SHALO_2190 92a0eff29ad1f128646c8e91b5e9132d 154 SUPERFAMILY SSF52121 8 154 1.31E-55 T 18-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 SHALO_2190 92a0eff29ad1f128646c8e91b5e9132d 154 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 15 150 2.1E-56 T 18-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 SHALO_0738 e4f167f134177faf2fc2b9060c3dc58e 731 Gene3D G3DSA:3.30.450.20 433 563 3.6E-31 T 18-10-2018 SHALO_0738 e4f167f134177faf2fc2b9060c3dc58e 731 Pfam PF13426 PAS domain 33 130 6.0E-9 T 18-10-2018 IPR000014 PAS domain SHALO_0738 e4f167f134177faf2fc2b9060c3dc58e 731 Pfam PF13426 PAS domain 453 552 1.1E-12 T 18-10-2018 IPR000014 PAS domain SHALO_0738 e4f167f134177faf2fc2b9060c3dc58e 731 SUPERFAMILY SSF55785 25 131 1.4E-17 T 18-10-2018 IPR035965 PAS domain superfamily SHALO_0738 e4f167f134177faf2fc2b9060c3dc58e 731 Gene3D G3DSA:3.30.450.20 147 275 1.9E-22 T 18-10-2018 SHALO_0738 e4f167f134177faf2fc2b9060c3dc58e 731 Gene3D G3DSA:3.30.450.40 276 432 6.3E-7 T 18-10-2018 IPR029016 GAF-like domain superfamily SHALO_0738 e4f167f134177faf2fc2b9060c3dc58e 731 SUPERFAMILY SSF55073 570 727 4.08E-51 T 18-10-2018 IPR029787 Nucleotide cyclase SHALO_0738 e4f167f134177faf2fc2b9060c3dc58e 731 SMART SM00267 554 726 1.0E-69 T 18-10-2018 IPR000160 GGDEF domain SHALO_0738 e4f167f134177faf2fc2b9060c3dc58e 731 Pfam PF00989 PAS fold 152 262 5.0E-17 T 18-10-2018 IPR013767 PAS fold GO:0006355 SHALO_0738 e4f167f134177faf2fc2b9060c3dc58e 731 SUPERFAMILY SSF55785 137 262 5.96E-22 T 18-10-2018 IPR035965 PAS domain superfamily SHALO_0738 e4f167f134177faf2fc2b9060c3dc58e 731 SUPERFAMILY SSF55785 446 552 2.79E-25 T 18-10-2018 IPR035965 PAS domain superfamily SHALO_0738 e4f167f134177faf2fc2b9060c3dc58e 731 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 444 561 8.4E-14 T 18-10-2018 IPR000014 PAS domain SHALO_0738 e4f167f134177faf2fc2b9060c3dc58e 731 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 24 138 2.4E-18 T 18-10-2018 IPR000014 PAS domain SHALO_0738 e4f167f134177faf2fc2b9060c3dc58e 731 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 147 270 1.4E-21 T 18-10-2018 IPR000014 PAS domain SHALO_0738 e4f167f134177faf2fc2b9060c3dc58e 731 SMART SM00086 91 131 8.0 T 18-10-2018 IPR001610 PAC motif SHALO_0738 e4f167f134177faf2fc2b9060c3dc58e 731 SMART SM00086 512 554 5.7E-4 T 18-10-2018 IPR001610 PAC motif SHALO_0738 e4f167f134177faf2fc2b9060c3dc58e 731 SMART SM00086 223 265 1.4E-6 T 18-10-2018 IPR001610 PAC motif SHALO_0738 e4f167f134177faf2fc2b9060c3dc58e 731 Gene3D G3DSA:3.30.450.20 24 145 3.0E-18 T 18-10-2018 SHALO_0738 e4f167f134177faf2fc2b9060c3dc58e 731 SMART SM00091 440 506 2.7 T 18-10-2018 IPR000014 PAS domain SHALO_0738 e4f167f134177faf2fc2b9060c3dc58e 731 SMART SM00091 150 216 2.3E-9 T 18-10-2018 IPR000014 PAS domain SHALO_0738 e4f167f134177faf2fc2b9060c3dc58e 731 SMART SM00091 20 86 1.5E-6 T 18-10-2018 IPR000014 PAS domain SHALO_0738 e4f167f134177faf2fc2b9060c3dc58e 731 Gene3D G3DSA:3.30.70.270 564 731 5.6E-59 T 18-10-2018 SHALO_0738 e4f167f134177faf2fc2b9060c3dc58e 731 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 561 724 8.3E-43 T 18-10-2018 IPR000160 GGDEF domain SHALO_0738 e4f167f134177faf2fc2b9060c3dc58e 731 SUPERFAMILY SSF55781 309 440 1.28E-7 T 18-10-2018 SHALO_0738 e4f167f134177faf2fc2b9060c3dc58e 731 Pfam PF00990 Diguanylate cyclase, GGDEF domain 565 721 4.4E-49 T 18-10-2018 IPR000160 GGDEF domain SHALO_0223 5993f247e161261e19b832b30d0a4f51 227 Gene3D G3DSA:1.10.287.1080 123 215 2.2E-29 T 18-10-2018 SHALO_0223 5993f247e161261e19b832b30d0a4f51 227 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 54 107 1.0E-16 T 18-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 SHALO_0223 5993f247e161261e19b832b30d0a4f51 227 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 127 209 1.1E-28 T 18-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 SHALO_0223 5993f247e161261e19b832b30d0a4f51 227 Gene3D G3DSA:3.10.20.400 2 95 1.5E-39 T 18-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 SHALO_0223 5993f247e161261e19b832b30d0a4f51 227 SUPERFAMILY SSF101386 125 213 1.33E-23 T 18-10-2018 SHALO_0223 5993f247e161261e19b832b30d0a4f51 227 SUPERFAMILY SSF141734 4 111 2.22E-48 T 18-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 SHALO_0223 5993f247e161261e19b832b30d0a4f51 227 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 31 104 2.9E-35 T 18-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 SHALO_0223 5993f247e161261e19b832b30d0a4f51 227 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 5 108 31.622 T 18-10-2018 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 SHALO_0223 5993f247e161261e19b832b30d0a4f51 227 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 7 214 34.516 T 18-10-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 SHALO_0223 5993f247e161261e19b832b30d0a4f51 227 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 123 209 18.452 T 18-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 SHALO_0223 5993f247e161261e19b832b30d0a4f51 227 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 129 212 8.3E-15 T 18-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 SHALO_0434 e4d9e288c59a4dc4a90c32931b1853b3 187 SUPERFAMILY SSF82185 41 159 6.67E-27 T 18-10-2018 SHALO_0434 e4d9e288c59a4dc4a90c32931b1853b3 187 Pfam PF07661 MORN repeat variant 43 62 8.8E-4 T 18-10-2018 IPR011652 MORN variant SHALO_0434 e4d9e288c59a4dc4a90c32931b1853b3 187 Pfam PF07661 MORN repeat variant 139 159 1.7E-4 T 18-10-2018 IPR011652 MORN variant SHALO_0434 e4d9e288c59a4dc4a90c32931b1853b3 187 Pfam PF07661 MORN repeat variant 66 87 9.2E-5 T 18-10-2018 IPR011652 MORN variant SHALO_0434 e4d9e288c59a4dc4a90c32931b1853b3 187 Pfam PF07661 MORN repeat variant 115 133 1.8E-4 T 18-10-2018 IPR011652 MORN variant SHALO_0434 e4d9e288c59a4dc4a90c32931b1853b3 187 Pfam PF07661 MORN repeat variant 91 111 0.015 T 18-10-2018 IPR011652 MORN variant SHALO_0434 e4d9e288c59a4dc4a90c32931b1853b3 187 Gene3D G3DSA:3.90.930.1 67 184 6.7E-21 T 18-10-2018 SHALO_2284 69b2d6a3220101c3df5837b78cdcb8cf 370 SUPERFAMILY SSF46689 2 38 7.77E-5 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SHALO_2284 69b2d6a3220101c3df5837b78cdcb8cf 370 SUPERFAMILY SSF53098 123 295 9.48E-15 T 18-10-2018 IPR012337 Ribonuclease H-like superfamily SHALO_2284 69b2d6a3220101c3df5837b78cdcb8cf 370 Gene3D G3DSA:1.10.10.60 3 42 1.8E-5 T 18-10-2018 SHALO_2284 69b2d6a3220101c3df5837b78cdcb8cf 370 Pfam PF00665 Integrase core domain 123 245 2.7E-22 T 18-10-2018 IPR001584 Integrase, catalytic core GO:0015074 SHALO_2284 69b2d6a3220101c3df5837b78cdcb8cf 370 Pfam PF13384 Homeodomain-like domain 10 37 6.4E-6 T 18-10-2018 SHALO_2284 69b2d6a3220101c3df5837b78cdcb8cf 370 Gene3D G3DSA:3.30.420.10 118 321 1.3E-8 T 18-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 SHALO_2753 788d44d9d019af34899d8105f03d0c50 192 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 1 186 30.944 T 18-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 SHALO_2753 788d44d9d019af34899d8105f03d0c50 192 Pfam PF02669 K+-transporting ATPase, c chain 6 185 6.5E-61 T 18-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 SHALO_2753 788d44d9d019af34899d8105f03d0c50 192 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 4 185 4.3E-57 T 18-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 SHALO_2753 788d44d9d019af34899d8105f03d0c50 192 PIRSF PIRSF001296 1 189 9.2E-64 T 18-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 SHALO_2344 b03695c468e3185f2cc112e2e76dc9e0 257 Gene3D G3DSA:3.40.1090.10 3 98 3.6E-18 T 18-10-2018 SHALO_2344 b03695c468e3185f2cc112e2e76dc9e0 257 Pfam PF01734 Patatin-like phospholipase 9 166 6.6E-13 T 18-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 SHALO_2344 b03695c468e3185f2cc112e2e76dc9e0 257 SUPERFAMILY SSF52151 6 202 4.71E-40 T 18-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase SHALO_1312 7a3176c6c9f75ad36c6c37a13ef2c1b0 69 Gene3D G3DSA:2.40.50.240 2 67 7.4E-16 T 18-10-2018 IPR024044 NifT/FixU barrel-like domain superfamily SHALO_1312 7a3176c6c9f75ad36c6c37a13ef2c1b0 69 TIGRFAM TIGR02934 nifT_nitrog: probable nitrogen fixation protein FixT 2 67 2.2E-19 T 18-10-2018 IPR009727 NifT/FixU GO:0009399 SHALO_1312 7a3176c6c9f75ad36c6c37a13ef2c1b0 69 SUPERFAMILY SSF159203 3 59 1.31E-15 T 18-10-2018 IPR024044 NifT/FixU barrel-like domain superfamily SHALO_1312 7a3176c6c9f75ad36c6c37a13ef2c1b0 69 Pfam PF06988 NifT/FixU protein 1 60 3.7E-18 T 18-10-2018 IPR009727 NifT/FixU GO:0009399 SHALO_2156 47a53ea5919bdc8f33b9ca52fd92a3a3 156 Pfam PF04608 Phosphatidylglycerophosphatase A 4 141 1.2E-43 T 18-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 SHALO_2156 47a53ea5919bdc8f33b9ca52fd92a3a3 156 PIRSF PIRSF006162 1 151 2.1E-41 T 18-10-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 SHALO_2156 47a53ea5919bdc8f33b9ca52fd92a3a3 156 SUPERFAMILY SSF101307 4 141 3.92E-34 T 18-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 SHALO_2850 df772ba0452036a97a8ffbe906c55a03 75 Pfam PF09834 Predicted membrane protein (DUF2061) 9 60 4.5E-23 T 18-10-2018 IPR018638 Domain of unknown function DUF2061, membrane SHALO_1403 d7db9f0fe1ab1f8283c108729f2ba19d 179 TIGRFAM TIGR00140 hupD: hydrogenase expression/formation protein 3 156 2.7E-45 T 18-10-2018 IPR004419 Peptidase A31, hydrogenase expression/formation protein GO:0016485|GO:0046872 SHALO_1403 d7db9f0fe1ab1f8283c108729f2ba19d 179 Pfam PF01750 Hydrogenase maturation protease 22 149 2.5E-27 T 18-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SHALO_1403 d7db9f0fe1ab1f8283c108729f2ba19d 179 SUPERFAMILY SSF53163 2 164 8.11E-38 T 18-10-2018 IPR023430 Peptidase HybD-like domain superfamily SHALO_1403 d7db9f0fe1ab1f8283c108729f2ba19d 179 PRINTS PR00446 Hydrogen uptake protein signature 15 26 3.0E-13 T 18-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SHALO_1403 d7db9f0fe1ab1f8283c108729f2ba19d 179 PRINTS PR00446 Hydrogen uptake protein signature 59 69 3.0E-13 T 18-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SHALO_1403 d7db9f0fe1ab1f8283c108729f2ba19d 179 PRINTS PR00446 Hydrogen uptake protein signature 3 15 3.0E-13 T 18-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SHALO_1403 d7db9f0fe1ab1f8283c108729f2ba19d 179 PRINTS PR00446 Hydrogen uptake protein signature 38 55 3.0E-13 T 18-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SHALO_1403 d7db9f0fe1ab1f8283c108729f2ba19d 179 Gene3D G3DSA:3.40.50.1450 1 161 8.3E-27 T 18-10-2018 IPR023430 Peptidase HybD-like domain superfamily SHALO_1403 d7db9f0fe1ab1f8283c108729f2ba19d 179 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 4 150 4.8E-35 T 18-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SHALO_1039 5d143da62fce1186cc1e6af1ce462e83 653 SMART SM00267 226 398 1.6E-7 T 18-10-2018 IPR000160 GGDEF domain SHALO_1039 5d143da62fce1186cc1e6af1ce462e83 653 Gene3D G3DSA:3.20.20.450 409 650 5.4E-36 T 18-10-2018 IPR035919 EAL domain superfamily SHALO_1039 5d143da62fce1186cc1e6af1ce462e83 653 Pfam PF16448 LapD/MoxY periplasmic domain 23 146 1.5E-38 T 18-10-2018 IPR032244 LapD/MoxY, periplasmic domain SHALO_1039 5d143da62fce1186cc1e6af1ce462e83 653 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 238 392 2.9E-12 T 18-10-2018 IPR000160 GGDEF domain SHALO_1039 5d143da62fce1186cc1e6af1ce462e83 653 SMART SM00052 410 652 1.4E-8 T 18-10-2018 IPR001633 EAL domain SHALO_1039 5d143da62fce1186cc1e6af1ce462e83 653 SUPERFAMILY SSF55073 243 391 6.04E-18 T 18-10-2018 IPR029787 Nucleotide cyclase SHALO_1039 5d143da62fce1186cc1e6af1ce462e83 653 Pfam PF00990 Diguanylate cyclase, GGDEF domain 238 391 2.7E-20 T 18-10-2018 IPR000160 GGDEF domain SHALO_1039 5d143da62fce1186cc1e6af1ce462e83 653 SUPERFAMILY SSF141868 416 649 9.55E-36 T 18-10-2018 IPR035919 EAL domain superfamily SHALO_1039 5d143da62fce1186cc1e6af1ce462e83 653 Gene3D G3DSA:3.30.70.270 220 396 1.7E-23 T 18-10-2018 SHALO_1039 5d143da62fce1186cc1e6af1ce462e83 653 Pfam PF00563 EAL domain 416 649 9.8E-30 T 18-10-2018 IPR001633 EAL domain SHALO_1039 5d143da62fce1186cc1e6af1ce462e83 653 Gene3D G3DSA:3.30.1040.50 102 149 1.9E-12 T 18-10-2018 SHALO_1102 32a22f69a124f06051ee096ecd0f1fb6 275 Gene3D G3DSA:2.10.109.10 28 250 2.0E-48 T 18-10-2018 SHALO_1102 32a22f69a124f06051ee096ecd0f1fb6 275 ProSitePatterns PS00761 Signal peptidases I signature 3. 215 228 - T 18-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 SHALO_1102 32a22f69a124f06051ee096ecd0f1fb6 275 Gene3D G3DSA:2.170.230.10 116 209 2.0E-48 T 18-10-2018 SHALO_1102 32a22f69a124f06051ee096ecd0f1fb6 275 SUPERFAMILY SSF51306 27 264 3.71E-56 T 18-10-2018 IPR036286 LexA/Signal peptidase-like superfamily SHALO_1102 32a22f69a124f06051ee096ecd0f1fb6 275 Pfam PF00717 Peptidase S24-like 35 125 1.6E-16 T 18-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C SHALO_1102 32a22f69a124f06051ee096ecd0f1fb6 275 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 17 250 4.6E-39 T 18-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SHALO_1102 32a22f69a124f06051ee096ecd0f1fb6 275 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 210 229 1.9E-15 T 18-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SHALO_1102 32a22f69a124f06051ee096ecd0f1fb6 275 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 105 117 1.9E-15 T 18-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SHALO_1102 32a22f69a124f06051ee096ecd0f1fb6 275 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 28 44 1.9E-15 T 18-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SHALO_1365 d0f3e565831d82cf426bd9e3e0932c30 350 PRINTS PR01010 Flagellar P-ring protein signature 102 119 1.3E-72 T 18-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SHALO_1365 d0f3e565831d82cf426bd9e3e0932c30 350 PRINTS PR01010 Flagellar P-ring protein signature 156 174 1.3E-72 T 18-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SHALO_1365 d0f3e565831d82cf426bd9e3e0932c30 350 PRINTS PR01010 Flagellar P-ring protein signature 244 256 1.3E-72 T 18-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SHALO_1365 d0f3e565831d82cf426bd9e3e0932c30 350 PRINTS PR01010 Flagellar P-ring protein signature 21 36 1.3E-72 T 18-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SHALO_1365 d0f3e565831d82cf426bd9e3e0932c30 350 PRINTS PR01010 Flagellar P-ring protein signature 36 51 1.3E-72 T 18-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SHALO_1365 d0f3e565831d82cf426bd9e3e0932c30 350 PRINTS PR01010 Flagellar P-ring protein signature 119 137 1.3E-72 T 18-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SHALO_1365 d0f3e565831d82cf426bd9e3e0932c30 350 PRINTS PR01010 Flagellar P-ring protein signature 80 99 1.3E-72 T 18-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SHALO_1365 d0f3e565831d82cf426bd9e3e0932c30 350 PRINTS PR01010 Flagellar P-ring protein signature 182 200 1.3E-72 T 18-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SHALO_1365 d0f3e565831d82cf426bd9e3e0932c30 350 PRINTS PR01010 Flagellar P-ring protein signature 55 70 1.3E-72 T 18-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SHALO_1365 d0f3e565831d82cf426bd9e3e0932c30 350 Pfam PF02119 Flagellar P-ring protein 21 349 1.2E-113 T 18-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SHALO_1365 d0f3e565831d82cf426bd9e3e0932c30 350 Hamap MF_00416 Flagellar P-ring protein [flgI]. 1 350 34.326 T 18-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SHALO_2626 5ed2024b4455715e31dc72a479342718 471 SMART SM00387 366 471 1.3E-8 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_2626 5ed2024b4455715e31dc72a479342718 471 SUPERFAMILY SSF55874 326 471 1.92E-23 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_2626 5ed2024b4455715e31dc72a479342718 471 SUPERFAMILY SSF47384 250 321 3.53E-6 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SHALO_2626 5ed2024b4455715e31dc72a479342718 471 Pfam PF11845 Protein of unknown function (DUF3365) 12 200 1.1E-31 T 18-10-2018 IPR021796 Protein of unknown function DUF3365 SHALO_2626 5ed2024b4455715e31dc72a479342718 471 Gene3D G3DSA:3.30.565.10 328 471 7.8E-24 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_2626 5ed2024b4455715e31dc72a479342718 471 Gene3D G3DSA:1.10.287.130 240 322 5.8E-10 T 18-10-2018 SHALO_2626 5ed2024b4455715e31dc72a479342718 471 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 369 468 1.6E-7 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_0990 a0808e57bd1b491711174546851447ed 86 Pfam PF12844 Helix-turn-helix domain 22 82 5.3E-9 T 18-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SHALO_0990 a0808e57bd1b491711174546851447ed 86 Gene3D G3DSA:1.10.260.40 10 86 2.1E-10 T 18-10-2018 SHALO_0990 a0808e57bd1b491711174546851447ed 86 SUPERFAMILY SSF47413 13 83 1.45E-9 T 18-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 SHALO_0990 a0808e57bd1b491711174546851447ed 86 SMART SM00530 22 80 5.1E-4 T 18-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SHALO_2898 8b36ee538f8df9b3ab73e16f02efb8d9 443 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 322 1.0E-77 T 18-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SHALO_2898 8b36ee538f8df9b3ab73e16f02efb8d9 443 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 3.7E-39 T 18-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 SHALO_2898 8b36ee538f8df9b3ab73e16f02efb8d9 443 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 3 442 2.2E-200 T 18-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 SHALO_2898 8b36ee538f8df9b3ab73e16f02efb8d9 443 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 287 294 - T 18-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SHALO_2898 8b36ee538f8df9b3ab73e16f02efb8d9 443 Pfam PF00289 Biotin carboxylase, N-terminal domain 3 111 5.1E-41 T 18-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 SHALO_2898 8b36ee538f8df9b3ab73e16f02efb8d9 443 SUPERFAMILY SSF51246 331 442 1.2E-42 T 18-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 SHALO_2898 8b36ee538f8df9b3ab73e16f02efb8d9 443 Gene3D G3DSA:3.30.470.130 1 443 6.9E-185 T 18-10-2018 SHALO_2898 8b36ee538f8df9b3ab73e16f02efb8d9 443 SMART SM00878 336 441 1.7E-60 T 18-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 SHALO_2898 8b36ee538f8df9b3ab73e16f02efb8d9 443 SUPERFAMILY SSF56059 84 347 6.19E-66 T 18-10-2018 SHALO_2898 8b36ee538f8df9b3ab73e16f02efb8d9 443 SUPERFAMILY SSF52440 2 114 3.24E-44 T 18-10-2018 IPR016185 Pre-ATP-grasp domain superfamily SHALO_1307 bce3561a921fa5c3b908253b02d800c9 347 Gene3D G3DSA:3.40.50.300 14 216 1.6E-68 T 18-10-2018 SHALO_1307 bce3561a921fa5c3b908253b02d800c9 347 SUPERFAMILY SSF90002 256 342 2.62E-15 T 18-10-2018 SHALO_1307 bce3561a921fa5c3b908253b02d800c9 347 Gene3D G3DSA:3.30.1220.10 235 345 4.0E-26 T 18-10-2018 IPR036627 CobW-like, C-terminal domain superfamily SHALO_1307 bce3561a921fa5c3b908253b02d800c9 347 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 256 343 1.1E-11 T 18-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal SHALO_1307 bce3561a921fa5c3b908253b02d800c9 347 SUPERFAMILY SSF52540 15 204 7.22E-40 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_1307 bce3561a921fa5c3b908253b02d800c9 347 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 17 198 1.2E-51 T 18-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain SHALO_1687 cfe41e8a7dcb522cd94e1639b6d8f541 265 SUPERFAMILY SSF55073 105 262 1.65E-45 T 18-10-2018 IPR029787 Nucleotide cyclase SHALO_1687 cfe41e8a7dcb522cd94e1639b6d8f541 265 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 97 263 4.8E-46 T 18-10-2018 IPR000160 GGDEF domain SHALO_1687 cfe41e8a7dcb522cd94e1639b6d8f541 265 SMART SM00267 89 264 8.3E-52 T 18-10-2018 IPR000160 GGDEF domain SHALO_1687 cfe41e8a7dcb522cd94e1639b6d8f541 265 Gene3D G3DSA:3.30.70.270 95 264 7.7E-51 T 18-10-2018 SHALO_1687 cfe41e8a7dcb522cd94e1639b6d8f541 265 Pfam PF00990 Diguanylate cyclase, GGDEF domain 100 259 1.2E-44 T 18-10-2018 IPR000160 GGDEF domain SHALO_2953 c23354210287cefbeb32d13343b7556f 151 SUPERFAMILY SSF53155 1 72 1.16E-16 T 18-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 SHALO_2953 c23354210287cefbeb32d13343b7556f 151 Gene3D G3DSA:1.10.10.10 67 151 9.4E-34 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_2953 c23354210287cefbeb32d13343b7556f 151 Gene3D G3DSA:3.30.160.70 1 63 1.5E-11 T 18-10-2018 SHALO_2953 c23354210287cefbeb32d13343b7556f 151 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 68 147 8.8E-34 T 18-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 SHALO_2953 c23354210287cefbeb32d13343b7556f 151 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 118 124 - T 18-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 SHALO_2953 c23354210287cefbeb32d13343b7556f 151 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 2 64 3.6E-10 T 18-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 SHALO_2953 c23354210287cefbeb32d13343b7556f 151 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 5 148 37.869 T 18-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 SHALO_2953 c23354210287cefbeb32d13343b7556f 151 SUPERFAMILY SSF46767 67 148 6.28E-30 T 18-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 SHALO_2953 c23354210287cefbeb32d13343b7556f 151 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 70 148 2.8E-30 T 18-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 SHALO_2300 66bd3652cc7b5110c098f06ec251959f 263 SUPERFAMILY SSF53850 31 257 1.18E-20 T 18-10-2018 SHALO_2300 66bd3652cc7b5110c098f06ec251959f 263 Gene3D G3DSA:3.40.190.10 111 211 1.4E-16 T 18-10-2018 SHALO_2300 66bd3652cc7b5110c098f06ec251959f 263 Gene3D G3DSA:3.40.190.10 33 239 1.4E-16 T 18-10-2018 SHALO_2300 66bd3652cc7b5110c098f06ec251959f 263 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 32 238 5.5E-12 T 18-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SHALO_0517 9db9bae64acfaf70b083609c9fbbc9a2 342 SUPERFAMILY SSF50621 225 342 1.22E-23 T 18-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 SHALO_0517 9db9bae64acfaf70b083609c9fbbc9a2 342 Pfam PF01168 Alanine racemase, N-terminal domain 7 216 1.1E-38 T 18-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 SHALO_0517 9db9bae64acfaf70b083609c9fbbc9a2 342 Gene3D G3DSA:3.20.20.10 8 221 2.3E-56 T 18-10-2018 IPR029066 PLP-binding barrel SHALO_0517 9db9bae64acfaf70b083609c9fbbc9a2 342 SMART SM01005 230 342 1.4E-18 T 18-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 SHALO_0517 9db9bae64acfaf70b083609c9fbbc9a2 342 Gene3D G3DSA:2.40.37.10 222 339 2.3E-56 T 18-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 SHALO_0517 9db9bae64acfaf70b083609c9fbbc9a2 342 PRINTS PR00992 Alanine racemase signature 143 154 5.7E-27 T 18-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 SHALO_0517 9db9bae64acfaf70b083609c9fbbc9a2 342 PRINTS PR00992 Alanine racemase signature 263 278 5.7E-27 T 18-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 SHALO_0517 9db9bae64acfaf70b083609c9fbbc9a2 342 PRINTS PR00992 Alanine racemase signature 190 217 5.7E-27 T 18-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 SHALO_0517 9db9bae64acfaf70b083609c9fbbc9a2 342 PRINTS PR00992 Alanine racemase signature 25 41 5.7E-27 T 18-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 SHALO_0517 9db9bae64acfaf70b083609c9fbbc9a2 342 PRINTS PR00992 Alanine racemase signature 110 122 5.7E-27 T 18-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 SHALO_0517 9db9bae64acfaf70b083609c9fbbc9a2 342 PRINTS PR00992 Alanine racemase signature 246 261 5.7E-27 T 18-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 SHALO_0517 9db9bae64acfaf70b083609c9fbbc9a2 342 TIGRFAM TIGR00492 alr: alanine racemase 2 342 4.8E-52 T 18-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 SHALO_0517 9db9bae64acfaf70b083609c9fbbc9a2 342 SUPERFAMILY SSF51419 7 231 1.6E-39 T 18-10-2018 IPR029066 PLP-binding barrel SHALO_0517 9db9bae64acfaf70b083609c9fbbc9a2 342 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 30 40 - T 18-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 SHALO_0517 9db9bae64acfaf70b083609c9fbbc9a2 342 Pfam PF00842 Alanine racemase, C-terminal domain 233 340 1.9E-14 T 18-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 SHALO_0517 9db9bae64acfaf70b083609c9fbbc9a2 342 Hamap MF_01201 Alanine racemase. 1 342 19.849 T 18-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 SHALO_2824 9a863f73c977d58eef8eb1d85db1af7a 326 Gene3D G3DSA:2.40.50.100 41 239 1.1E-35 T 18-10-2018 SHALO_2824 9a863f73c977d58eef8eb1d85db1af7a 326 SUPERFAMILY SSF111369 44 123 8.76E-6 T 18-10-2018 SHALO_2824 9a863f73c977d58eef8eb1d85db1af7a 326 Gene3D G3DSA:2.40.30.170 240 318 1.1E-35 T 18-10-2018 SHALO_2824 9a863f73c977d58eef8eb1d85db1af7a 326 Gene3D G3DSA:1.10.287.470 75 204 1.1E-35 T 18-10-2018 SHALO_2824 9a863f73c977d58eef8eb1d85db1af7a 326 SUPERFAMILY SSF111369 134 320 6.15E-6 T 18-10-2018 SHALO_2824 9a863f73c977d58eef8eb1d85db1af7a 326 Pfam PF13437 HlyD family secretion protein 204 315 6.1E-13 T 18-10-2018 SHALO_0483 6f0ae11ad9c95abc8c3c7ec0f88e25b3 692 Pfam PF03764 Elongation factor G, domain IV 478 597 4.8E-49 T 18-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 SHALO_0483 6f0ae11ad9c95abc8c3c7ec0f88e25b3 692 Pfam PF00679 Elongation factor G C-terminus 599 685 1.5E-33 T 18-10-2018 IPR000640 Elongation factor EFG, domain V-like SHALO_0483 6f0ae11ad9c95abc8c3c7ec0f88e25b3 692 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 11 180 2.1E-35 T 18-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 SHALO_0483 6f0ae11ad9c95abc8c3c7ec0f88e25b3 692 Gene3D G3DSA:3.40.50.300 1 293 1.3E-112 T 18-10-2018 SHALO_0483 6f0ae11ad9c95abc8c3c7ec0f88e25b3 692 PRINTS PR00315 GTP-binding elongation factor signature 78 88 3.8E-16 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHALO_0483 6f0ae11ad9c95abc8c3c7ec0f88e25b3 692 PRINTS PR00315 GTP-binding elongation factor signature 12 25 3.8E-16 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHALO_0483 6f0ae11ad9c95abc8c3c7ec0f88e25b3 692 PRINTS PR00315 GTP-binding elongation factor signature 94 105 3.8E-16 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHALO_0483 6f0ae11ad9c95abc8c3c7ec0f88e25b3 692 PRINTS PR00315 GTP-binding elongation factor signature 58 66 3.8E-16 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHALO_0483 6f0ae11ad9c95abc8c3c7ec0f88e25b3 692 PRINTS PR00315 GTP-binding elongation factor signature 130 139 3.8E-16 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHALO_0483 6f0ae11ad9c95abc8c3c7ec0f88e25b3 692 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 691 0.0 T 18-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 SHALO_0483 6f0ae11ad9c95abc8c3c7ec0f88e25b3 692 Pfam PF14492 Elongation Factor G, domain II 403 477 1.9E-34 T 18-10-2018 SHALO_0483 6f0ae11ad9c95abc8c3c7ec0f88e25b3 692 SMART SM00889 479 597 2.2E-73 T 18-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 SHALO_0483 6f0ae11ad9c95abc8c3c7ec0f88e25b3 692 Gene3D G3DSA:3.30.230.10 483 686 5.3E-96 T 18-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SHALO_0483 6f0ae11ad9c95abc8c3c7ec0f88e25b3 692 SMART SM00838 599 686 3.5E-61 T 18-10-2018 IPR000640 Elongation factor EFG, domain V-like SHALO_0483 6f0ae11ad9c95abc8c3c7ec0f88e25b3 692 SUPERFAMILY SSF54980 403 480 8.27E-25 T 18-10-2018 IPR035647 EF-G domain III/V-like SHALO_0483 6f0ae11ad9c95abc8c3c7ec0f88e25b3 692 Hamap MF_00054_B Elongation factor G [fusA]. 6 690 113.633 T 18-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 SHALO_0483 6f0ae11ad9c95abc8c3c7ec0f88e25b3 692 SUPERFAMILY SSF54980 602 689 4.6E-32 T 18-10-2018 IPR035647 EF-G domain III/V-like SHALO_0483 6f0ae11ad9c95abc8c3c7ec0f88e25b3 692 Gene3D G3DSA:2.40.30.10 294 404 2.6E-41 T 18-10-2018 SHALO_0483 6f0ae11ad9c95abc8c3c7ec0f88e25b3 692 SUPERFAMILY SSF54211 478 598 9.1E-46 T 18-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold SHALO_0483 6f0ae11ad9c95abc8c3c7ec0f88e25b3 692 Gene3D G3DSA:3.30.70.240 603 673 5.3E-96 T 18-10-2018 SHALO_0483 6f0ae11ad9c95abc8c3c7ec0f88e25b3 692 SUPERFAMILY SSF50447 265 401 1.36E-33 T 18-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily SHALO_0483 6f0ae11ad9c95abc8c3c7ec0f88e25b3 692 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 18-10-2018 IPR031157 Tr-type G domain, conserved site SHALO_0483 6f0ae11ad9c95abc8c3c7ec0f88e25b3 692 Pfam PF00009 Elongation factor Tu GTP binding domain 10 281 1.0E-68 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHALO_0483 6f0ae11ad9c95abc8c3c7ec0f88e25b3 692 Gene3D G3DSA:3.30.70.870 405 482 2.7E-33 T 18-10-2018 SHALO_0483 6f0ae11ad9c95abc8c3c7ec0f88e25b3 692 SUPERFAMILY SSF52540 7 281 8.93E-109 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0483 6f0ae11ad9c95abc8c3c7ec0f88e25b3 692 Pfam PF03144 Elongation factor Tu domain 2 323 390 3.6E-13 T 18-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 SHALO_0933 acb12ddabf5facf0ede9f93d5f7b4e1b 278 SUPERFAMILY SSF46767 193 275 7.85E-29 T 18-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 SHALO_0933 acb12ddabf5facf0ede9f93d5f7b4e1b 278 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 244 250 - T 18-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 SHALO_0933 acb12ddabf5facf0ede9f93d5f7b4e1b 278 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 196 274 6.9E-28 T 18-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 SHALO_0933 acb12ddabf5facf0ede9f93d5f7b4e1b 278 Gene3D G3DSA:1.10.10.10 193 278 6.8E-31 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_0933 acb12ddabf5facf0ede9f93d5f7b4e1b 278 SMART SM00342 29 111 2.3E-18 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_0933 acb12ddabf5facf0ede9f93d5f7b4e1b 278 Gene3D G3DSA:3.30.160.70 109 188 8.4E-11 T 18-10-2018 SHALO_0933 acb12ddabf5facf0ede9f93d5f7b4e1b 278 SUPERFAMILY SSF46689 14 63 3.63E-10 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SHALO_0933 acb12ddabf5facf0ede9f93d5f7b4e1b 278 Gene3D G3DSA:1.10.10.60 13 108 3.9E-21 T 18-10-2018 SHALO_0933 acb12ddabf5facf0ede9f93d5f7b4e1b 278 SUPERFAMILY SSF53155 117 181 1.26E-10 T 18-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 SHALO_0933 acb12ddabf5facf0ede9f93d5f7b4e1b 278 Pfam PF12833 Helix-turn-helix domain 36 110 1.1E-15 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_0933 acb12ddabf5facf0ede9f93d5f7b4e1b 278 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 194 273 1.3E-30 T 18-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 SHALO_1355 a98f458ec41b75f48e2cf21fb1f30d01 178 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 11 171 2.4E-27 T 18-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 SHALO_1355 a98f458ec41b75f48e2cf21fb1f30d01 178 SUPERFAMILY SSF53323 1 175 1.83E-24 T 18-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 SHALO_1355 a98f458ec41b75f48e2cf21fb1f30d01 178 Gene3D G3DSA:3.40.920.10 1 178 4.2E-32 T 18-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 SHALO_1566 c8eedf53c5d21503faa03a9e2dbbc47b 367 SUPERFAMILY SSF53335 3 366 8.94E-64 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_1566 c8eedf53c5d21503faa03a9e2dbbc47b 367 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 18 366 1.1E-134 T 18-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 SHALO_1566 c8eedf53c5d21503faa03a9e2dbbc47b 367 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 300 329 - T 18-10-2018 IPR030390 RNA methyltransferase TrmA, active site SHALO_1566 c8eedf53c5d21503faa03a9e2dbbc47b 367 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 12 367 38.11 T 18-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 SHALO_1566 c8eedf53c5d21503faa03a9e2dbbc47b 367 Gene3D G3DSA:3.40.50.150 21 363 7.8E-117 T 18-10-2018 SHALO_1566 c8eedf53c5d21503faa03a9e2dbbc47b 367 Gene3D G3DSA:3.40.1350.30 53 191 7.8E-117 T 18-10-2018 SHALO_1566 c8eedf53c5d21503faa03a9e2dbbc47b 367 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 18 366 5.8E-131 T 18-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 SHALO_1239 25276541555311070de420b64f26230c 268 Pfam PF02567 Phenazine biosynthesis-like protein 11 260 2.7E-51 T 18-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 SHALO_1239 25276541555311070de420b64f26230c 268 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 6 224 9.5E-34 T 18-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 SHALO_1239 25276541555311070de420b64f26230c 268 Gene3D G3DSA:3.10.310.10 122 254 3.2E-79 T 18-10-2018 SHALO_1239 25276541555311070de420b64f26230c 268 PIRSF PIRSF016184 4 266 5.1E-46 T 18-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 SHALO_1239 25276541555311070de420b64f26230c 268 Gene3D G3DSA:3.10.310.10 8 257 3.2E-79 T 18-10-2018 SHALO_1239 25276541555311070de420b64f26230c 268 SUPERFAMILY SSF54506 5 264 4.15E-69 T 18-10-2018 SHALO_1378 f1f8687219c47da7a11372a365ebff37 299 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 5 295 29.988 T 18-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 SHALO_1378 f1f8687219c47da7a11372a365ebff37 299 Gene3D G3DSA:1.10.1040.10 158 298 2.3E-43 T 18-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SHALO_1378 f1f8687219c47da7a11372a365ebff37 299 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 162 183 - T 18-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 SHALO_1378 f1f8687219c47da7a11372a365ebff37 299 PIRSF PIRSF000114 2 27 0.48 T 18-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 SHALO_1378 f1f8687219c47da7a11372a365ebff37 299 PIRSF PIRSF000114 32 299 1.3E-70 T 18-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 SHALO_1378 f1f8687219c47da7a11372a365ebff37 299 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 44 134 4.8E-17 T 18-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 SHALO_1378 f1f8687219c47da7a11372a365ebff37 299 Gene3D G3DSA:3.40.50.720 32 157 4.0E-27 T 18-10-2018 SHALO_1378 f1f8687219c47da7a11372a365ebff37 299 SUPERFAMILY SSF48179 153 297 3.23E-46 T 18-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 SHALO_1378 f1f8687219c47da7a11372a365ebff37 299 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 154 289 1.3E-45 T 18-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 SHALO_1378 f1f8687219c47da7a11372a365ebff37 299 SUPERFAMILY SSF51735 6 143 1.81E-20 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_2874 f5a6e9e9e7a7d20b89bd1e5d1583b0b7 416 TIGRFAM TIGR00935 2a45: arsenite/antimonite efflux pump membrane protein 2 416 5.5E-159 T 18-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SHALO_2874 f5a6e9e9e7a7d20b89bd1e5d1583b0b7 416 PRINTS PR00758 Arsenical pump membrane protein signature 278 302 3.1E-77 T 18-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SHALO_2874 f5a6e9e9e7a7d20b89bd1e5d1583b0b7 416 PRINTS PR00758 Arsenical pump membrane protein signature 101 125 3.1E-77 T 18-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SHALO_2874 f5a6e9e9e7a7d20b89bd1e5d1583b0b7 416 PRINTS PR00758 Arsenical pump membrane protein signature 359 384 3.1E-77 T 18-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SHALO_2874 f5a6e9e9e7a7d20b89bd1e5d1583b0b7 416 PRINTS PR00758 Arsenical pump membrane protein signature 217 242 3.1E-77 T 18-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SHALO_2874 f5a6e9e9e7a7d20b89bd1e5d1583b0b7 416 PRINTS PR00758 Arsenical pump membrane protein signature 392 416 3.1E-77 T 18-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SHALO_2874 f5a6e9e9e7a7d20b89bd1e5d1583b0b7 416 PRINTS PR00758 Arsenical pump membrane protein signature 177 200 3.1E-77 T 18-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SHALO_2874 f5a6e9e9e7a7d20b89bd1e5d1583b0b7 416 PRINTS PR00758 Arsenical pump membrane protein signature 144 168 3.1E-77 T 18-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SHALO_2874 f5a6e9e9e7a7d20b89bd1e5d1583b0b7 416 Pfam PF02040 Arsenical pump membrane protein 3 415 6.2E-138 T 18-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SHALO_1291 c57f2cbe1fc4e5e0aa451dff24bfbdb5 474 SUPERFAMILY SSF51971 153 399 1.47E-59 T 18-10-2018 SHALO_1291 c57f2cbe1fc4e5e0aa451dff24bfbdb5 474 Gene3D G3DSA:1.10.1060.10 2 150 5.4E-26 T 18-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 SHALO_1291 c57f2cbe1fc4e5e0aa451dff24bfbdb5 474 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 22 141 1.2E-26 T 18-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 SHALO_1291 c57f2cbe1fc4e5e0aa451dff24bfbdb5 474 Gene3D G3DSA:3.50.50.60 151 281 1.2E-32 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SHALO_1291 c57f2cbe1fc4e5e0aa451dff24bfbdb5 474 Gene3D G3DSA:3.50.50.60 288 473 1.9E-20 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SHALO_1291 c57f2cbe1fc4e5e0aa451dff24bfbdb5 474 SUPERFAMILY SSF46548 11 164 4.18E-27 T 18-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 SHALO_1291 c57f2cbe1fc4e5e0aa451dff24bfbdb5 474 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 154 451 4.6E-27 T 18-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_1291 c57f2cbe1fc4e5e0aa451dff24bfbdb5 474 PRINTS PR00419 Adrenodoxin reductase family signature 178 191 9.4E-27 T 18-10-2018 SHALO_1291 c57f2cbe1fc4e5e0aa451dff24bfbdb5 474 PRINTS PR00419 Adrenodoxin reductase family signature 293 307 9.4E-27 T 18-10-2018 SHALO_1291 c57f2cbe1fc4e5e0aa451dff24bfbdb5 474 PRINTS PR00419 Adrenodoxin reductase family signature 327 340 9.4E-27 T 18-10-2018 SHALO_1291 c57f2cbe1fc4e5e0aa451dff24bfbdb5 474 PRINTS PR00419 Adrenodoxin reductase family signature 155 177 9.4E-27 T 18-10-2018 SHALO_1291 c57f2cbe1fc4e5e0aa451dff24bfbdb5 474 PRINTS PR00419 Adrenodoxin reductase family signature 220 230 9.4E-27 T 18-10-2018 SHALO_1291 c57f2cbe1fc4e5e0aa451dff24bfbdb5 474 SUPERFAMILY SSF51971 338 463 4.36E-10 T 18-10-2018 SHALO_0965 c88f0189b6aefb58f0dabf7ffee80b96 186 Pfam PF02613 Nitrate reductase delta subunit 27 150 1.1E-20 T 18-10-2018 IPR020945 DMSO/Nitrate reductase chaperone SHALO_0965 c88f0189b6aefb58f0dabf7ffee80b96 186 Gene3D G3DSA:1.10.3480.10 6 176 3.5E-29 T 18-10-2018 SHALO_0965 c88f0189b6aefb58f0dabf7ffee80b96 186 SUPERFAMILY SSF89155 25 170 1.14E-25 T 18-10-2018 IPR036411 TorD-like superfamily SHALO_0269 9dc7ae6d96c69ccf444180cc2c87d71d 94 SUPERFAMILY SSF54862 5 69 2.79E-15 T 18-10-2018 SHALO_0269 9dc7ae6d96c69ccf444180cc2c87d71d 94 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_0269 9dc7ae6d96c69ccf444180cc2c87d71d 94 Gene3D G3DSA:3.30.70.20 2 84 8.9E-23 T 18-10-2018 SHALO_0269 9dc7ae6d96c69ccf444180cc2c87d71d 94 Pfam PF12838 4Fe-4S dicluster domain 9 63 3.5E-7 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_2415 ba9e13e38a39468efcb44639f1d109bc 72 Gene3D G3DSA:2.40.50.140 1 72 4.0E-35 T 18-10-2018 SHALO_2415 ba9e13e38a39468efcb44639f1d109bc 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 25.322 T 18-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 SHALO_2415 ba9e13e38a39468efcb44639f1d109bc 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 1.4E-26 T 18-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 SHALO_2415 ba9e13e38a39468efcb44639f1d109bc 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 5.2E-33 T 18-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 SHALO_2415 ba9e13e38a39468efcb44639f1d109bc 72 SUPERFAMILY SSF50249 1 71 9.55E-27 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold SHALO_2209 1a4607604cb3eb288490e07eb43c862a 301 SUPERFAMILY SSF103190 8 146 4.32E-21 T 18-10-2018 IPR029151 Periplasmic sensor-like domain superfamily SHALO_2209 1a4607604cb3eb288490e07eb43c862a 301 Gene3D G3DSA:3.30.450.20 36 137 2.6E-16 T 18-10-2018 SHALO_2028 02e2b450a6d2957f5bf56e11213f6fe6 286 PIRSF PIRSF006593 1 285 2.2E-80 T 18-10-2018 IPR014444 Uncharacterised conserved protein UCP006593 SHALO_2028 02e2b450a6d2957f5bf56e11213f6fe6 286 Pfam PF01937 Protein of unknown function DUF89 5 273 8.7E-45 T 18-10-2018 IPR002791 Domain of unknown function DUF89 SHALO_2028 02e2b450a6d2957f5bf56e11213f6fe6 286 SUPERFAMILY SSF111321 1 284 2.35E-76 T 18-10-2018 IPR036075 AF1104-like superfamily SHALO_2028 02e2b450a6d2957f5bf56e11213f6fe6 286 Gene3D G3DSA:1.10.285.20 68 132 3.7E-10 T 18-10-2018 SHALO_2028 02e2b450a6d2957f5bf56e11213f6fe6 286 Gene3D G3DSA:3.40.50.10880 135 285 2.6E-51 T 18-10-2018 SHALO_0892 6dd4e885ea022edad1ecb1d141c9a95e 306 Gene3D G3DSA:3.30.450.20 64 175 1.8E-42 T 18-10-2018 SHALO_0892 6dd4e885ea022edad1ecb1d141c9a95e 306 SUPERFAMILY SSF103190 95 182 4.91E-9 T 18-10-2018 IPR029151 Periplasmic sensor-like domain superfamily SHALO_0892 6dd4e885ea022edad1ecb1d141c9a95e 306 Pfam PF02743 Cache domain 88 262 2.6E-30 T 18-10-2018 IPR033479 Double Cache domain 1 SHALO_0892 6dd4e885ea022edad1ecb1d141c9a95e 306 Gene3D G3DSA:3.30.450.20 52 271 1.8E-42 T 18-10-2018 SHALO_2793 550c80b84912d2969c094bd5cbc180cc 281 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 253 264 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_2793 550c80b84912d2969c094bd5cbc180cc 281 Gene3D G3DSA:3.30.70.20 210 271 5.0E-5 T 18-10-2018 SHALO_2793 550c80b84912d2969c094bd5cbc180cc 281 SUPERFAMILY SSF54862 72 270 3.24E-15 T 18-10-2018 SHALO_2793 550c80b84912d2969c094bd5cbc180cc 281 Pfam PF00037 4Fe-4S binding domain 251 269 1.2E-4 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_2793 550c80b84912d2969c094bd5cbc180cc 281 Pfam PF12801 4Fe-4S binding domain 125 154 4.9 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_2793 550c80b84912d2969c094bd5cbc180cc 281 Pfam PF12801 4Fe-4S binding domain 45 51 480.0 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_2793 550c80b84912d2969c094bd5cbc180cc 281 Pfam PF12801 4Fe-4S binding domain 62 96 4.1E-10 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_2793 550c80b84912d2969c094bd5cbc180cc 281 Pfam PF12801 4Fe-4S binding domain 169 205 4.9E-4 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_0192 a621a1b0f1ea336627fefc0259434a9f 100 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 2 100 19.364 T 18-10-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 SHALO_0192 a621a1b0f1ea336627fefc0259434a9f 100 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 7 96 3.4E-21 T 18-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like SHALO_1117 913aed8fdafb25e882a272f70b008a49 215 Gene3D G3DSA:1.25.40.10 31 195 2.8E-19 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SHALO_1117 913aed8fdafb25e882a272f70b008a49 215 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 6 183 5.5E-26 T 18-10-2018 IPR017689 Outer membrane protein assembly factor BamD SHALO_1117 913aed8fdafb25e882a272f70b008a49 215 Pfam PF13525 Outer membrane lipoprotein 29 180 3.0E-20 T 18-10-2018 IPR039565 Outer membrane lipoprotein BamD-like SHALO_2718 edae5a154fe2b519a46f20e41acefcce 392 Pfam PF00501 AMP-binding enzyme 42 303 1.3E-20 T 18-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 SHALO_2718 edae5a154fe2b519a46f20e41acefcce 392 Gene3D G3DSA:3.40.50.12780 2 299 3.0E-20 T 18-10-2018 SHALO_2718 edae5a154fe2b519a46f20e41acefcce 392 Gene3D G3DSA:3.30.300.30 300 389 5.1E-7 T 18-10-2018 SHALO_2718 edae5a154fe2b519a46f20e41acefcce 392 SUPERFAMILY SSF56801 50 388 1.83E-36 T 18-10-2018 SHALO_0032 4e2b5f2b9b1fa9133508cf06b39cd555 622 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 383 535 9.5E-28 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_0032 4e2b5f2b9b1fa9133508cf06b39cd555 622 SMART SM00283 346 621 3.9E-29 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_0032 4e2b5f2b9b1fa9133508cf06b39cd555 622 SMART SM00304 291 345 5.4E-6 T 18-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 SHALO_0032 4e2b5f2b9b1fa9133508cf06b39cd555 622 Pfam PF02743 Cache domain 37 252 3.1E-16 T 18-10-2018 IPR033479 Double Cache domain 1 SHALO_0032 4e2b5f2b9b1fa9133508cf06b39cd555 622 Gene3D G3DSA:3.30.450.20 50 265 1.1E-18 T 18-10-2018 SHALO_0032 4e2b5f2b9b1fa9133508cf06b39cd555 622 Gene3D G3DSA:3.30.450.20 62 169 1.1E-18 T 18-10-2018 SHALO_0032 4e2b5f2b9b1fa9133508cf06b39cd555 622 Gene3D G3DSA:1.10.287.950 293 622 7.4E-60 T 18-10-2018 SHALO_0032 4e2b5f2b9b1fa9133508cf06b39cd555 622 SUPERFAMILY SSF58104 313 622 1.14E-53 T 18-10-2018 SHALO_1623 69b72816ddceb0cc1aeecf7223b4143e 421 Gene3D G3DSA:3.65.10.10 6 416 1.6E-161 T 18-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 SHALO_1623 69b72816ddceb0cc1aeecf7223b4143e 421 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 408 9.3E-100 T 18-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 SHALO_1623 69b72816ddceb0cc1aeecf7223b4143e 421 Gene3D G3DSA:3.65.10.10 21 233 1.6E-161 T 18-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 SHALO_1623 69b72816ddceb0cc1aeecf7223b4143e 421 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 419 42.189 T 18-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 SHALO_1623 69b72816ddceb0cc1aeecf7223b4143e 421 SUPERFAMILY SSF55205 1 420 4.41E-132 T 18-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 SHALO_1623 69b72816ddceb0cc1aeecf7223b4143e 421 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 418 4.0E-177 T 18-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 SHALO_1259 9412c009ac895a01c12288b3909012fb 554 SUPERFAMILY SSF55874 398 550 2.36E-29 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_1259 9412c009ac895a01c12288b3909012fb 554 SUPERFAMILY SSF47384 325 399 2.55E-6 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SHALO_1259 9412c009ac895a01c12288b3909012fb 554 PRINTS PR00344 Bacterial sensor protein C-terminal signature 514 532 1.7E-10 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_1259 9412c009ac895a01c12288b3909012fb 554 PRINTS PR00344 Bacterial sensor protein C-terminal signature 538 551 1.7E-10 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_1259 9412c009ac895a01c12288b3909012fb 554 PRINTS PR00344 Bacterial sensor protein C-terminal signature 501 511 1.7E-10 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_1259 9412c009ac895a01c12288b3909012fb 554 PRINTS PR00344 Bacterial sensor protein C-terminal signature 483 497 1.7E-10 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_1259 9412c009ac895a01c12288b3909012fb 554 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 444 552 1.4E-17 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_1259 9412c009ac895a01c12288b3909012fb 554 Gene3D G3DSA:3.30.565.10 401 553 9.9E-34 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_1259 9412c009ac895a01c12288b3909012fb 554 Gene3D G3DSA:1.10.287.130 317 399 3.4E-10 T 18-10-2018 SHALO_1259 9412c009ac895a01c12288b3909012fb 554 SMART SM00387 442 554 3.4E-21 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_0160 2590c0cd853496170d30e2f1c4da16e6 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 18-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 SHALO_0160 2590c0cd853496170d30e2f1c4da16e6 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 8.0E-43 T 18-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SHALO_0160 2590c0cd853496170d30e2f1c4da16e6 112 Gene3D G3DSA:3.30.70.120 1 112 2.0E-47 T 18-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal SHALO_0160 2590c0cd853496170d30e2f1c4da16e6 112 SMART SM00938 4 105 3.1E-64 T 18-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SHALO_0160 2590c0cd853496170d30e2f1c4da16e6 112 PRINTS PR00340 P-II protein signature 52 75 1.8E-41 T 18-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SHALO_0160 2590c0cd853496170d30e2f1c4da16e6 112 PRINTS PR00340 P-II protein signature 2 17 1.8E-41 T 18-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SHALO_0160 2590c0cd853496170d30e2f1c4da16e6 112 PRINTS PR00340 P-II protein signature 23 41 1.8E-41 T 18-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SHALO_0160 2590c0cd853496170d30e2f1c4da16e6 112 PRINTS PR00340 P-II protein signature 83 103 1.8E-41 T 18-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SHALO_0160 2590c0cd853496170d30e2f1c4da16e6 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 18-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 SHALO_0160 2590c0cd853496170d30e2f1c4da16e6 112 SUPERFAMILY SSF54913 1 112 6.67E-45 T 18-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta SHALO_0160 2590c0cd853496170d30e2f1c4da16e6 112 PIRSF PIRSF039144 1 112 2.7E-54 T 18-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SHALO_2332 af357ca7bd40ec7e30db96756da8b7a8 138 Gene3D G3DSA:2.30.110.10 2 125 3.6E-9 T 18-10-2018 IPR012349 FMN-binding split barrel GO:0048037 SHALO_2332 af357ca7bd40ec7e30db96756da8b7a8 138 PIRSF PIRSF009554 2 138 9.0E-42 T 18-10-2018 IPR011194 Uncharacterised protein family UPF0306 SHALO_2332 af357ca7bd40ec7e30db96756da8b7a8 138 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 4 86 1.1E-7 T 18-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 SHALO_2332 af357ca7bd40ec7e30db96756da8b7a8 138 SUPERFAMILY SSF50475 5 129 3.31E-16 T 18-10-2018 SHALO_1658 f8dfa30f4fec63d4081d485dc04dc198 192 Gene3D G3DSA:3.30.70.1560 78 168 1.8E-38 T 18-10-2018 SHALO_1658 f8dfa30f4fec63d4081d485dc04dc198 192 Pfam PF00849 RNA pseudouridylate synthase 11 142 1.5E-10 T 18-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHALO_1658 f8dfa30f4fec63d4081d485dc04dc198 192 SUPERFAMILY SSF55120 9 189 2.24E-30 T 18-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHALO_1658 f8dfa30f4fec63d4081d485dc04dc198 192 Gene3D G3DSA:3.30.70.580 12 183 1.8E-38 T 18-10-2018 SHALO_1658 f8dfa30f4fec63d4081d485dc04dc198 192 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 15 180 9.8E-37 T 18-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 SHALO_1658 f8dfa30f4fec63d4081d485dc04dc198 192 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 50 64 - T 18-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 SHALO_1140 2b7b17f46171d1e23bd0f2d676e0743c 124 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 1 110 1.5E-13 T 18-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 SHALO_1140 2b7b17f46171d1e23bd0f2d676e0743c 124 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 5 114 8.0E-27 T 18-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 SHALO_1140 2b7b17f46171d1e23bd0f2d676e0743c 124 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 1 115 17.766 T 18-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 SHALO_1140 2b7b17f46171d1e23bd0f2d676e0743c 124 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 1 114 3.5E-22 T 18-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 SHALO_1140 2b7b17f46171d1e23bd0f2d676e0743c 124 SUPERFAMILY SSF56214 2 114 1.26E-21 T 18-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 SHALO_1140 2b7b17f46171d1e23bd0f2d676e0743c 124 Gene3D G3DSA:3.90.470.20 1 115 1.8E-24 T 18-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 SHALO_1140 2b7b17f46171d1e23bd0f2d676e0743c 124 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 115 2.7E-32 T 18-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 SHALO_2768 af6bd6fada19af0d3c05ec7ba6d17180 161 SUPERFAMILY SSF141523 27 159 1.44E-20 T 18-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like SHALO_2768 af6bd6fada19af0d3c05ec7ba6d17180 161 Gene3D G3DSA:2.40.440.10 22 159 9.8E-14 T 18-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like SHALO_2768 af6bd6fada19af0d3c05ec7ba6d17180 161 Pfam PF03734 L,D-transpeptidase catalytic domain 28 159 3.4E-14 T 18-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 SHALO_1204 48d559bf4f6692f20c1e6f82bf990fa7 430 Gene3D G3DSA:3.40.50.1980 17 410 2.4E-84 T 18-10-2018 SHALO_1204 48d559bf4f6692f20c1e6f82bf990fa7 430 SUPERFAMILY SSF53807 7 429 9.48E-94 T 18-10-2018 SHALO_1204 48d559bf4f6692f20c1e6f82bf990fa7 430 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 44 51 - T 18-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 SHALO_1204 48d559bf4f6692f20c1e6f82bf990fa7 430 Gene3D G3DSA:1.20.89.10 269 428 2.4E-84 T 18-10-2018 SHALO_1204 48d559bf4f6692f20c1e6f82bf990fa7 430 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 26 427 7.6E-80 T 18-10-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 SHALO_1204 48d559bf4f6692f20c1e6f82bf990fa7 430 Gene3D G3DSA:3.40.50.1980 162 417 2.4E-84 T 18-10-2018 SHALO_1204 48d559bf4f6692f20c1e6f82bf990fa7 430 TIGRFAM TIGR01285 nifN: nitrogenase molybdenum-iron cofactor biosynthesis protein NifN 14 428 6.4E-111 T 18-10-2018 IPR005975 Nitrogenase molybdenum-iron cofactor biosynthesis protein GO:0009399|GO:0065003 SHALO_1204 48d559bf4f6692f20c1e6f82bf990fa7 430 Gene3D G3DSA:3.40.50.1980 26 161 2.4E-84 T 18-10-2018 SHALO_2388 5188e0cf2496061f65c4657888c7f194 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 221 4.8E-11 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_2388 5188e0cf2496061f65c4657888c7f194 223 Gene3D G3DSA:3.40.50.2300 4 130 7.7E-35 T 18-10-2018 SHALO_2388 5188e0cf2496061f65c4657888c7f194 223 Pfam PF00072 Response regulator receiver domain 9 118 1.8E-27 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_2388 5188e0cf2496061f65c4657888c7f194 223 SUPERFAMILY SSF52172 5 177 4.7E-37 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_2388 5188e0cf2496061f65c4657888c7f194 223 SMART SM00448 7 118 8.9E-32 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_2388 5188e0cf2496061f65c4657888c7f194 223 SMART SM00862 151 221 3.1E-9 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_2388 5188e0cf2496061f65c4657888c7f194 223 Gene3D G3DSA:1.10.10.10 132 223 1.5E-17 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_0898 1e44c6dedb36f9a83dfbc7d174993597 616 Pfam PF00890 FAD binding domain 49 432 5.8E-94 T 18-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_0898 1e44c6dedb36f9a83dfbc7d174993597 616 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 50 69 3.5E-6 T 18-10-2018 SHALO_0898 1e44c6dedb36f9a83dfbc7d174993597 616 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 395 417 3.5E-6 T 18-10-2018 SHALO_0898 1e44c6dedb36f9a83dfbc7d174993597 616 SUPERFAMILY SSF46977 483 616 1.19E-35 T 18-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_0898 1e44c6dedb36f9a83dfbc7d174993597 616 Gene3D G3DSA:4.10.80.40 578 610 3.0E-6 T 18-10-2018 SHALO_0898 1e44c6dedb36f9a83dfbc7d174993597 616 SUPERFAMILY SSF51905 38 455 4.12E-68 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SHALO_0898 1e44c6dedb36f9a83dfbc7d174993597 616 SUPERFAMILY SSF56425 272 390 1.12E-37 T 18-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_0898 1e44c6dedb36f9a83dfbc7d174993597 616 PIRSF PIRSF000171 40 613 3.1E-41 T 18-10-2018 SHALO_0898 1e44c6dedb36f9a83dfbc7d174993597 616 Gene3D G3DSA:3.50.50.60 49 443 4.9E-135 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SHALO_0898 1e44c6dedb36f9a83dfbc7d174993597 616 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 49 616 1.4E-194 T 18-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_0898 1e44c6dedb36f9a83dfbc7d174993597 616 Gene3D G3DSA:1.20.58.100 460 577 3.9E-25 T 18-10-2018 SHALO_0898 1e44c6dedb36f9a83dfbc7d174993597 616 Gene3D G3DSA:3.90.700.10 281 385 4.9E-135 T 18-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_0898 1e44c6dedb36f9a83dfbc7d174993597 616 Pfam PF02910 Fumarate reductase flavoprotein C-term 490 616 2.2E-30 T 18-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_0950 b44dfcb2b7c6f5b0b5611ac7db334b09 271 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 62 73 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_0950 b44dfcb2b7c6f5b0b5611ac7db334b09 271 SUPERFAMILY SSF54862 58 218 1.33E-21 T 18-10-2018 SHALO_0950 b44dfcb2b7c6f5b0b5611ac7db334b09 271 Gene3D G3DSA:3.30.70.20 145 226 3.8E-9 T 18-10-2018 SHALO_0950 b44dfcb2b7c6f5b0b5611ac7db334b09 271 Gene3D G3DSA:3.30.70.20 54 134 4.8E-11 T 18-10-2018 SHALO_0950 b44dfcb2b7c6f5b0b5611ac7db334b09 271 TIGRFAM TIGR00397 mauM_napG: MauM/NapG family ferredoxin-type protein 12 227 4.2E-57 T 18-10-2018 IPR004494 MauM/NapG ferredoxin-type protein SHALO_0950 b44dfcb2b7c6f5b0b5611ac7db334b09 271 Pfam PF12838 4Fe-4S dicluster domain 155 208 4.4E-6 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_0950 b44dfcb2b7c6f5b0b5611ac7db334b09 271 Pfam PF12838 4Fe-4S dicluster domain 62 116 8.4E-9 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_2665 6e07dea6c83f6ce356f836b15232134c 181 SUPERFAMILY SSF46458 45 158 1.08E-14 T 18-10-2018 IPR009050 Globin-like superfamily SHALO_2665 6e07dea6c83f6ce356f836b15232134c 181 Gene3D G3DSA:1.10.490.10 35 180 4.9E-36 T 18-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 SHALO_2665 6e07dea6c83f6ce356f836b15232134c 181 Pfam PF01152 Bacterial-like globin 45 157 1.8E-10 T 18-10-2018 IPR001486 Truncated hemoglobin GO:0019825 SHALO_0022 3ce978adb8de719540019f1bade8b878 619 SMART SM00086 413 455 8.0E-4 T 18-10-2018 IPR001610 PAC motif SHALO_0022 3ce978adb8de719540019f1bade8b878 619 Pfam PF08447 PAS fold 364 446 2.7E-12 T 18-10-2018 IPR013655 PAS fold-3 GO:0005515 SHALO_0022 3ce978adb8de719540019f1bade8b878 619 SUPERFAMILY SSF55785 355 452 1.64E-22 T 18-10-2018 IPR035965 PAS domain superfamily SHALO_0022 3ce978adb8de719540019f1bade8b878 619 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 341 460 1.0E-18 T 18-10-2018 IPR000014 PAS domain SHALO_0022 3ce978adb8de719540019f1bade8b878 619 Gene3D G3DSA:3.30.70.270 460 618 2.5E-57 T 18-10-2018 SHALO_0022 3ce978adb8de719540019f1bade8b878 619 Pfam PF02743 Cache domain 61 271 1.1E-15 T 18-10-2018 IPR033479 Double Cache domain 1 SHALO_0022 3ce978adb8de719540019f1bade8b878 619 Gene3D G3DSA:3.30.450.20 330 459 3.4E-28 T 18-10-2018 SHALO_0022 3ce978adb8de719540019f1bade8b878 619 SUPERFAMILY SSF103190 59 208 9.03E-42 T 18-10-2018 IPR029151 Periplasmic sensor-like domain superfamily SHALO_0022 3ce978adb8de719540019f1bade8b878 619 Pfam PF00990 Diguanylate cyclase, GGDEF domain 463 614 4.2E-49 T 18-10-2018 IPR000160 GGDEF domain SHALO_0022 3ce978adb8de719540019f1bade8b878 619 SMART SM00267 451 619 1.7E-65 T 18-10-2018 IPR000160 GGDEF domain SHALO_0022 3ce978adb8de719540019f1bade8b878 619 SUPERFAMILY SSF55073 467 618 6.91E-50 T 18-10-2018 IPR029787 Nucleotide cyclase SHALO_0022 3ce978adb8de719540019f1bade8b878 619 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 459 617 7.7E-54 T 18-10-2018 IPR000160 GGDEF domain SHALO_0022 3ce978adb8de719540019f1bade8b878 619 Gene3D G3DSA:3.30.450.20 75 209 4.1E-43 T 18-10-2018 SHALO_3004 c7ee56c92586b7dbe927399fabcca321 798 SUPERFAMILY SSF56281 5 257 4.06E-33 T 18-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like SHALO_3004 c7ee56c92586b7dbe927399fabcca321 798 Pfam PF13487 HD domain 658 723 1.6E-21 T 18-10-2018 SHALO_3004 c7ee56c92586b7dbe927399fabcca321 798 SMART SM00471 480 741 1.4E-6 T 18-10-2018 IPR003607 HD/PDEase domain SHALO_3004 c7ee56c92586b7dbe927399fabcca321 798 SMART SM00849 18 191 0.0084 T 18-10-2018 IPR001279 Metallo-beta-lactamase SHALO_3004 c7ee56c92586b7dbe927399fabcca321 798 SUPERFAMILY SSF55781 273 464 1.35E-27 T 18-10-2018 SHALO_3004 c7ee56c92586b7dbe927399fabcca321 798 Gene3D G3DSA:3.30.450.40 270 461 7.7E-37 T 18-10-2018 IPR029016 GAF-like domain superfamily SHALO_3004 c7ee56c92586b7dbe927399fabcca321 798 Pfam PF01590 GAF domain 291 453 2.8E-12 T 18-10-2018 IPR003018 GAF domain GO:0005515 SHALO_3004 c7ee56c92586b7dbe927399fabcca321 798 Gene3D G3DSA:1.10.3210.10 462 580 2.6E-18 T 18-10-2018 SHALO_3004 c7ee56c92586b7dbe927399fabcca321 798 Gene3D G3DSA:1.10.3210.10 645 778 3.1E-30 T 18-10-2018 SHALO_3004 c7ee56c92586b7dbe927399fabcca321 798 SMART SM00065 290 463 2.7E-14 T 18-10-2018 IPR003018 GAF domain GO:0005515 SHALO_3004 c7ee56c92586b7dbe927399fabcca321 798 SUPERFAMILY SSF109604 470 574 1.41E-9 T 18-10-2018 SHALO_3004 c7ee56c92586b7dbe927399fabcca321 798 Pfam PF12706 Beta-lactamase superfamily domain 40 214 8.9E-14 T 18-10-2018 IPR001279 Metallo-beta-lactamase SHALO_3004 c7ee56c92586b7dbe927399fabcca321 798 SUPERFAMILY SSF109604 656 770 6.91E-12 T 18-10-2018 SHALO_3004 c7ee56c92586b7dbe927399fabcca321 798 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 49 67 1.1E-9 T 18-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 SHALO_3004 c7ee56c92586b7dbe927399fabcca321 798 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 198 211 1.1E-9 T 18-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 SHALO_3004 c7ee56c92586b7dbe927399fabcca321 798 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 81 102 1.1E-9 T 18-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 SHALO_3004 c7ee56c92586b7dbe927399fabcca321 798 Pfam PF01966 HD domain 485 567 1.4E-4 T 18-10-2018 IPR006674 HD domain SHALO_3004 c7ee56c92586b7dbe927399fabcca321 798 Gene3D G3DSA:3.60.15.10 4 269 4.1E-31 T 18-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like SHALO_1799 e1e2fd1e589e4f7707870311109fe94b 529 Gene3D G3DSA:3.30.450.290 34 169 3.9E-10 T 18-10-2018 SHALO_1799 e1e2fd1e589e4f7707870311109fe94b 529 SMART SM00304 198 252 9.1E-9 T 18-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 SHALO_1799 e1e2fd1e589e4f7707870311109fe94b 529 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 337 492 3.1E-29 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_1799 e1e2fd1e589e4f7707870311109fe94b 529 Pfam PF00672 HAMP domain 202 248 8.5E-7 T 18-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 SHALO_1799 e1e2fd1e589e4f7707870311109fe94b 529 Gene3D G3DSA:1.10.287.950 198 529 1.4E-56 T 18-10-2018 SHALO_1799 e1e2fd1e589e4f7707870311109fe94b 529 SUPERFAMILY SSF58104 220 528 4.58E-57 T 18-10-2018 SHALO_1799 e1e2fd1e589e4f7707870311109fe94b 529 SMART SM00283 267 528 2.4E-28 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_1095 958d14e81c7696a10b620c71adc187c6 486 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 4 482 33.343 T 18-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 SHALO_1095 958d14e81c7696a10b620c71adc187c6 486 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 326 333 - T 18-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 SHALO_1095 958d14e81c7696a10b620c71adc187c6 486 PRINTS PR00481 Cytosol aminopeptidase signature 241 258 1.6E-49 T 18-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SHALO_1095 958d14e81c7696a10b620c71adc187c6 486 PRINTS PR00481 Cytosol aminopeptidase signature 350 365 1.6E-49 T 18-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SHALO_1095 958d14e81c7696a10b620c71adc187c6 486 PRINTS PR00481 Cytosol aminopeptidase signature 300 321 1.6E-49 T 18-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SHALO_1095 958d14e81c7696a10b620c71adc187c6 486 PRINTS PR00481 Cytosol aminopeptidase signature 263 284 1.6E-49 T 18-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SHALO_1095 958d14e81c7696a10b620c71adc187c6 486 PRINTS PR00481 Cytosol aminopeptidase signature 322 342 1.6E-49 T 18-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SHALO_1095 958d14e81c7696a10b620c71adc187c6 486 Gene3D G3DSA:3.40.220.10 1 148 9.9E-39 T 18-10-2018 SHALO_1095 958d14e81c7696a10b620c71adc187c6 486 SUPERFAMILY SSF53187 160 478 4.08E-109 T 18-10-2018 SHALO_1095 958d14e81c7696a10b620c71adc187c6 486 Gene3D G3DSA:3.40.630.10 149 483 5.5E-133 T 18-10-2018 SHALO_1095 958d14e81c7696a10b620c71adc187c6 486 SUPERFAMILY SSF52949 1 163 2.35E-15 T 18-10-2018 SHALO_1095 958d14e81c7696a10b620c71adc187c6 486 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 40 125 7.6E-8 T 18-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 SHALO_1095 958d14e81c7696a10b620c71adc187c6 486 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 165 472 2.0E-112 T 18-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 SHALO_1578 e17cc67263206e6151a31736389f96e9 129 SUPERFAMILY SSF49367 15 121 5.49E-18 T 18-10-2018 IPR036073 Desulfoferrodoxin, ferrous iron-binding domain superfamily GO:0005506|GO:0016491|GO:0055114 SHALO_1578 e17cc67263206e6151a31736389f96e9 129 Pfam PF01880 Desulfoferrodoxin 21 121 1.1E-16 T 18-10-2018 IPR002742 Desulfoferrodoxin, ferrous iron-binding domain GO:0005506|GO:0016491|GO:0055114 SHALO_1578 e17cc67263206e6151a31736389f96e9 129 Gene3D G3DSA:2.60.40.730 9 128 6.6E-17 T 18-10-2018 IPR036073 Desulfoferrodoxin, ferrous iron-binding domain superfamily GO:0005506|GO:0016491|GO:0055114 SHALO_1667 999b73ab92640894a444815945145652 207 Gene3D G3DSA:1.10.10.60 4 52 6.3E-19 T 18-10-2018 SHALO_1667 999b73ab92640894a444815945145652 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 2.6E-11 T 18-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SHALO_1667 999b73ab92640894a444815945145652 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 2.6E-11 T 18-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SHALO_1667 999b73ab92640894a444815945145652 207 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 18-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site SHALO_1667 999b73ab92640894a444815945145652 207 SUPERFAMILY SSF46689 3 84 8.48E-19 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SHALO_1667 999b73ab92640894a444815945145652 207 SUPERFAMILY SSF48498 82 182 2.91E-7 T 18-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily SHALO_1667 999b73ab92640894a444815945145652 207 Gene3D G3DSA:1.10.357.10 53 203 3.2E-12 T 18-10-2018 SHALO_1667 999b73ab92640894a444815945145652 207 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 58 4.3E-17 T 18-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SHALO_2450 78d2595b9e3c4d670f1ef72e9579ee27 734 Gene3D G3DSA:3.40.50.300 5 192 4.7E-40 T 18-10-2018 SHALO_2450 78d2595b9e3c4d670f1ef72e9579ee27 734 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 10 701 5.5E-184 T 18-10-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 SHALO_2450 78d2595b9e3c4d670f1ef72e9579ee27 734 Pfam PF07670 Nucleoside recognition 517 703 1.9E-32 T 18-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 SHALO_2450 78d2595b9e3c4d670f1ef72e9579ee27 734 Pfam PF07670 Nucleoside recognition 356 449 8.2E-14 T 18-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 SHALO_2450 78d2595b9e3c4d670f1ef72e9579ee27 734 Pfam PF07664 Ferrous iron transport protein B C terminus 460 512 1.9E-16 T 18-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 SHALO_2450 78d2595b9e3c4d670f1ef72e9579ee27 734 Pfam PF02421 Ferrous iron transport protein B 5 159 6.5E-57 T 18-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 SHALO_2450 78d2595b9e3c4d670f1ef72e9579ee27 734 SUPERFAMILY SSF52540 4 170 1.73E-34 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_1986 b64bf4d8c63d57ef20395c6f5e2bc20e 257 Gene3D G3DSA:1.20.5.140 197 226 4.6E-7 T 18-10-2018 SHALO_1986 b64bf4d8c63d57ef20395c6f5e2bc20e 257 SUPERFAMILY SSF53098 60 250 2.09E-46 T 18-10-2018 IPR012337 Ribonuclease H-like superfamily SHALO_1986 b64bf4d8c63d57ef20395c6f5e2bc20e 257 Gene3D G3DSA:3.30.420.10 51 196 3.9E-32 T 18-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 SHALO_1986 b64bf4d8c63d57ef20395c6f5e2bc20e 257 SMART SM00479 60 224 1.1E-32 T 18-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III SHALO_1986 b64bf4d8c63d57ef20395c6f5e2bc20e 257 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 60 241 1.2E-22 T 18-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHALO_1986 b64bf4d8c63d57ef20395c6f5e2bc20e 257 Pfam PF00929 Exonuclease 63 215 1.2E-28 T 18-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III SHALO_0327 553f6c5be5b81ca385b04e201c095f07 330 Pfam PF00962 Adenosine/AMP deaminase 8 323 6.0E-75 T 18-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 SHALO_0327 553f6c5be5b81ca385b04e201c095f07 330 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 8 325 2.0E-116 T 18-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 SHALO_0327 553f6c5be5b81ca385b04e201c095f07 330 Hamap MF_01962 Adenine deaminase. 4 316 84.252 T 18-10-2018 IPR028892 Adenine deaminase type 2 GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 SHALO_0327 553f6c5be5b81ca385b04e201c095f07 330 SUPERFAMILY SSF51556 4 327 1.33E-87 T 18-10-2018 IPR032466 Metal-dependent hydrolase SHALO_0327 553f6c5be5b81ca385b04e201c095f07 330 Gene3D G3DSA:3.20.20.140 1 329 3.2E-104 T 18-10-2018 SHALO_2360 9b7f416bbbc74bacff5c9c2a8ca2b041 533 Gene3D G3DSA:1.10.287.950 201 533 1.3E-54 T 18-10-2018 SHALO_2360 9b7f416bbbc74bacff5c9c2a8ca2b041 533 SUPERFAMILY SSF58104 223 532 8.24E-55 T 18-10-2018 SHALO_2360 9b7f416bbbc74bacff5c9c2a8ca2b041 533 SMART SM00283 263 531 1.2E-40 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_2360 9b7f416bbbc74bacff5c9c2a8ca2b041 533 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 349 467 9.1E-34 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_2435 a96a5b7514de6665ac6e9c8d6a50518b 204 SUPERFAMILY SSF52166 2 201 1.44E-58 T 18-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 SHALO_2435 a96a5b7514de6665ac6e9c8d6a50518b 204 Gene3D G3DSA:3.40.1370.10 3 204 2.4E-58 T 18-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 SHALO_2435 a96a5b7514de6665ac6e9c8d6a50518b 204 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 25 201 1.4E-61 T 18-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_2435 a96a5b7514de6665ac6e9c8d6a50518b 204 Pfam PF00573 Ribosomal protein L4/L1 family 23 202 9.7E-54 T 18-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 SHALO_2435 a96a5b7514de6665ac6e9c8d6a50518b 204 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 9 204 26.716 T 18-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_2982 cd8e8dc3b4d9e158b0da6c3ed94d910a 479 Pfam PF11853 Protein of unknown function (DUF3373) 89 479 8.1E-124 T 18-10-2018 IPR021803 Protein of unknown function DUF3373 SHALO_1802 c8c51937443bb8ef0bb1f9a2287df4f7 420 Gene3D G3DSA:1.20.210.10 4 112 1.2E-5 T 18-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_1802 c8c51937443bb8ef0bb1f9a2287df4f7 420 Gene3D G3DSA:1.20.210.10 113 280 9.8E-6 T 18-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_1802 c8c51937443bb8ef0bb1f9a2287df4f7 420 SUPERFAMILY SSF81442 25 144 1.7E-9 T 18-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_1762 7a415cf9b8d5b5233de55a300e05829d 237 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 5 236 7.0E-73 T 18-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 SHALO_1762 7a415cf9b8d5b5233de55a300e05829d 237 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 18-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 SHALO_1762 7a415cf9b8d5b5233de55a300e05829d 237 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 236 30.762 T 18-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 SHALO_1762 7a415cf9b8d5b5233de55a300e05829d 237 SUPERFAMILY SSF56104 3 235 1.93E-77 T 18-10-2018 SHALO_1762 7a415cf9b8d5b5233de55a300e05829d 237 Gene3D G3DSA:3.30.470.20 85 222 7.8E-93 T 18-10-2018 SHALO_1762 7a415cf9b8d5b5233de55a300e05829d 237 Gene3D G3DSA:3.30.200.20 7 233 7.8E-93 T 18-10-2018 SHALO_1762 7a415cf9b8d5b5233de55a300e05829d 237 Pfam PF01259 SAICAR synthetase 7 233 1.5E-62 T 18-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 SHALO_2456 6ea879ab8b5b2d59066f9bd1370f51fa 327 Pfam PF00764 Arginosuccinate synthase 6 73 2.9E-8 T 18-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 SHALO_2456 6ea879ab8b5b2d59066f9bd1370f51fa 327 SUPERFAMILY SSF52402 1 232 1.61E-29 T 18-10-2018 SHALO_2456 6ea879ab8b5b2d59066f9bd1370f51fa 327 Gene3D G3DSA:3.40.50.620 1 158 3.7E-36 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_2256 43ff5f7d661041f545d1aee4409ebfc8 182 SUPERFAMILY SSF52833 1 162 5.17E-37 T 18-10-2018 IPR036249 Thioredoxin-like superfamily SHALO_2256 43ff5f7d661041f545d1aee4409ebfc8 182 ProSitePatterns PS01265 Tpx family signature. 83 94 - T 18-10-2018 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 KEGG: 00480+1.11.1.15 SHALO_2256 43ff5f7d661041f545d1aee4409ebfc8 182 Hamap MF_00269 Thiol peroxidase [tpx]. 3 166 35.384 T 18-10-2018 IPR002065 Thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 KEGG: 00480+1.11.1.15 SHALO_2256 43ff5f7d661041f545d1aee4409ebfc8 182 Gene3D G3DSA:3.40.30.10 2 170 9.3E-43 T 18-10-2018 SHALO_2256 43ff5f7d661041f545d1aee4409ebfc8 182 Pfam PF08534 Redoxin 20 162 5.4E-19 T 18-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 SHALO_0557 bbac8f0f98e3d7fc5899753ca1a9e957 355 ProSitePatterns PS01127 Elongation factor Ts signature 2. 77 87 - T 18-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 SHALO_0557 bbac8f0f98e3d7fc5899753ca1a9e957 355 Gene3D G3DSA:3.30.479.20 57 149 2.2E-18 T 18-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 SHALO_0557 bbac8f0f98e3d7fc5899753ca1a9e957 355 SUPERFAMILY SSF54713 56 146 3.14E-16 T 18-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 SHALO_0557 bbac8f0f98e3d7fc5899753ca1a9e957 355 SUPERFAMILY SSF54713 150 337 8.72E-29 T 18-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 SHALO_0557 bbac8f0f98e3d7fc5899753ca1a9e957 355 Pfam PF00889 Elongation factor TS 73 337 5.0E-66 T 18-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 SHALO_0557 bbac8f0f98e3d7fc5899753ca1a9e957 355 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 355 3.2E-101 T 18-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 SHALO_0557 bbac8f0f98e3d7fc5899753ca1a9e957 355 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 18-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 SHALO_0557 bbac8f0f98e3d7fc5899753ca1a9e957 355 Hamap MF_00050 Elongation factor Ts [tsf]. 1 354 60.724 T 18-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 SHALO_0557 bbac8f0f98e3d7fc5899753ca1a9e957 355 SUPERFAMILY SSF46934 4 55 1.62E-17 T 18-10-2018 IPR009060 UBA-like superfamily GO:0005515 SHALO_0557 bbac8f0f98e3d7fc5899753ca1a9e957 355 Gene3D G3DSA:1.10.8.10 1 56 7.9E-26 T 18-10-2018 SHALO_0378 afd9c8038e624e773844ae36e7170ee9 426 SUPERFAMILY SSF52540 215 412 7.17E-35 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0378 afd9c8038e624e773844ae36e7170ee9 426 SMART SM00962 218 412 1.2E-61 T 18-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 SHALO_0378 afd9c8038e624e773844ae36e7170ee9 426 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 2 307 6.3E-70 T 18-10-2018 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 SHALO_0378 afd9c8038e624e773844ae36e7170ee9 426 Gene3D G3DSA:3.40.50.300 213 400 2.4E-66 T 18-10-2018 SHALO_0378 afd9c8038e624e773844ae36e7170ee9 426 Gene3D G3DSA:1.20.120.1380 163 402 2.4E-66 T 18-10-2018 SHALO_0378 afd9c8038e624e773844ae36e7170ee9 426 Pfam PF00448 SRP54-type protein, GTPase domain 219 411 1.1E-40 T 18-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 SHALO_0378 afd9c8038e624e773844ae36e7170ee9 426 SMART SM00382 217 375 1.4E-6 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_1387 00d29f7d650b59d9ddd242841ac455ca 247 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 175 190 - T 18-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SHALO_1387 00d29f7d650b59d9ddd242841ac455ca 247 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 50 246 6.8E-86 T 18-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 SHALO_1387 00d29f7d650b59d9ddd242841ac455ca 247 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 196 217 1.8E-66 T 18-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SHALO_1387 00d29f7d650b59d9ddd242841ac455ca 247 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 220 245 1.8E-66 T 18-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SHALO_1387 00d29f7d650b59d9ddd242841ac455ca 247 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 175 195 1.8E-66 T 18-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SHALO_1387 00d29f7d650b59d9ddd242841ac455ca 247 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 48 67 1.8E-66 T 18-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SHALO_1387 00d29f7d650b59d9ddd242841ac455ca 247 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 67 87 1.8E-66 T 18-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SHALO_1387 00d29f7d650b59d9ddd242841ac455ca 247 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 87 106 1.8E-66 T 18-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SHALO_1387 00d29f7d650b59d9ddd242841ac455ca 247 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 223 235 - T 18-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SHALO_1387 00d29f7d650b59d9ddd242841ac455ca 247 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 146 158 1.3E-22 T 18-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 SHALO_1387 00d29f7d650b59d9ddd242841ac455ca 247 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 118 132 1.3E-22 T 18-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 SHALO_1387 00d29f7d650b59d9ddd242841ac455ca 247 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 168 180 1.3E-22 T 18-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 SHALO_1387 00d29f7d650b59d9ddd242841ac455ca 247 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 46 55 1.3E-22 T 18-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 SHALO_1387 00d29f7d650b59d9ddd242841ac455ca 247 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 236 246 1.3E-22 T 18-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 SHALO_1387 00d29f7d650b59d9ddd242841ac455ca 247 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 106 118 1.3E-22 T 18-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 SHALO_1387 00d29f7d650b59d9ddd242841ac455ca 247 Pfam PF00813 FliP family 50 242 7.4E-80 T 18-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SHALO_2774 2e8b7b277ce172f7c0cee880725c8c44 396 Pfam PF00266 Aminotransferase class-V 3 365 1.0E-85 T 18-10-2018 IPR000192 Aminotransferase class V domain SHALO_2774 2e8b7b277ce172f7c0cee880725c8c44 396 SUPERFAMILY SSF53383 3 375 2.08E-104 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase SHALO_2774 2e8b7b277ce172f7c0cee880725c8c44 396 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 195 214 - T 18-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site SHALO_2774 2e8b7b277ce172f7c0cee880725c8c44 396 Gene3D G3DSA:3.90.1150.10 3 374 3.2E-141 T 18-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 SHALO_2774 2e8b7b277ce172f7c0cee880725c8c44 396 Gene3D G3DSA:3.40.640.10 14 258 3.2E-141 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 SHALO_2774 2e8b7b277ce172f7c0cee880725c8c44 396 PIRSF PIRSF005572 1 382 3.4E-123 T 18-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 SHALO_2774 2e8b7b277ce172f7c0cee880725c8c44 396 TIGRFAM TIGR03403 nifS_epsilon: cysteine desulfurase, NifS family 3 384 1.5E-220 T 18-10-2018 IPR017773 Cysteine desulfurase NifS, proteobacteria GO:0006534|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 SHALO_0062 c634318d6757a92055d12be3340ccbe5 402 Pfam PF09565 NgoFVII restriction endonuclease 18 131 9.5E-9 T 18-10-2018 IPR019065 Restriction endonuclease, type II, NgoFVII SHALO_0062 c634318d6757a92055d12be3340ccbe5 402 SUPERFAMILY SSF56024 62 146 6.98E-8 T 18-10-2018 SHALO_0062 c634318d6757a92055d12be3340ccbe5 402 Gene3D G3DSA:3.30.870.10 7 166 4.3E-23 T 18-10-2018 SHALO_1922 8110593def24da8a2966642d4e1fa0a0 490 Gene3D G3DSA:3.30.70.270 318 487 3.9E-55 T 18-10-2018 SHALO_1922 8110593def24da8a2966642d4e1fa0a0 490 SUPERFAMILY SSF103190 53 169 1.4E-6 T 18-10-2018 IPR029151 Periplasmic sensor-like domain superfamily SHALO_1922 8110593def24da8a2966642d4e1fa0a0 490 SUPERFAMILY SSF55073 337 487 5.1E-47 T 18-10-2018 IPR029787 Nucleotide cyclase SHALO_1922 8110593def24da8a2966642d4e1fa0a0 490 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 328 488 6.0E-51 T 18-10-2018 IPR000160 GGDEF domain SHALO_1922 8110593def24da8a2966642d4e1fa0a0 490 SMART SM00267 321 489 3.5E-57 T 18-10-2018 IPR000160 GGDEF domain SHALO_1922 8110593def24da8a2966642d4e1fa0a0 490 Pfam PF00990 Diguanylate cyclase, GGDEF domain 333 485 2.5E-47 T 18-10-2018 IPR000160 GGDEF domain SHALO_2529 5f6cd4e75cdf78e754b0d3ce1e485314 144 TIGRFAM TIGR02805 exbB2: tonB-system energizer ExbB 4 137 1.3E-51 T 18-10-2018 IPR014172 TonB-system energizer ExbB type-2 GO:0016020|GO:0055085 SHALO_2529 5f6cd4e75cdf78e754b0d3ce1e485314 144 Pfam PF01618 MotA/TolQ/ExbB proton channel family 42 137 1.9E-25 T 18-10-2018 IPR002898 MotA/TolQ/ExbB proton channel SHALO_2337 6c8231177d1c9f7e1059d192d446170d 465 Pfam PF02321 Outer membrane efflux protein 278 457 2.7E-26 T 18-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 SHALO_2337 6c8231177d1c9f7e1059d192d446170d 465 Pfam PF02321 Outer membrane efflux protein 58 246 3.1E-27 T 18-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 SHALO_2337 6c8231177d1c9f7e1059d192d446170d 465 Gene3D G3DSA:1.20.1600.10 49 459 2.8E-115 T 18-10-2018 SHALO_2337 6c8231177d1c9f7e1059d192d446170d 465 Gene3D G3DSA:2.20.200.10 95 348 2.8E-115 T 18-10-2018 SHALO_2337 6c8231177d1c9f7e1059d192d446170d 465 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 10 459 3.9E-106 T 18-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 SHALO_2337 6c8231177d1c9f7e1059d192d446170d 465 SUPERFAMILY SSF56954 2 460 7.98E-98 T 18-10-2018 SHALO_2522 d901107538975984276ff76673268f29 783 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 766 783 - T 18-10-2018 IPR010917 TonB-dependent receptor, conserved site SHALO_2522 d901107538975984276ff76673268f29 783 Gene3D G3DSA:2.40.170.20 248 783 2.7E-157 T 18-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily SHALO_2522 d901107538975984276ff76673268f29 783 Pfam PF00593 TonB dependent receptor 347 782 1.1E-43 T 18-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel SHALO_2522 d901107538975984276ff76673268f29 783 Gene3D G3DSA:2.170.130.10 120 245 1.6E-36 T 18-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily SHALO_2522 d901107538975984276ff76673268f29 783 Pfam PF07715 TonB-dependent Receptor Plug Domain 141 236 5.4E-13 T 18-10-2018 IPR012910 TonB-dependent receptor, plug domain SHALO_2522 d901107538975984276ff76673268f29 783 SMART SM00965 51 101 3.0E-11 T 18-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 SHALO_2522 d901107538975984276ff76673268f29 783 Pfam PF07660 Secretin and TonB N terminus short domain 52 101 5.6E-13 T 18-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 SHALO_2522 d901107538975984276ff76673268f29 783 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 143 783 2.5E-101 T 18-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 SHALO_2522 d901107538975984276ff76673268f29 783 Gene3D G3DSA:3.55.50.30 21 119 2.6E-23 T 18-10-2018 SHALO_2522 d901107538975984276ff76673268f29 783 SUPERFAMILY SSF56935 103 783 1.22E-113 T 18-10-2018 SHALO_2795 3e8a8fc89d9f30010e0caea7e716a409 225 Gene3D G3DSA:1.10.3480.10 1 205 1.7E-47 T 18-10-2018 SHALO_2795 3e8a8fc89d9f30010e0caea7e716a409 225 Pfam PF02613 Nitrate reductase delta subunit 40 172 3.4E-31 T 18-10-2018 IPR020945 DMSO/Nitrate reductase chaperone SHALO_2795 3e8a8fc89d9f30010e0caea7e716a409 225 SUPERFAMILY SSF89155 1 203 3.53E-39 T 18-10-2018 IPR036411 TorD-like superfamily SHALO_1173 ba5ae2e8103155e9294fd59d3dbe299e 201 SUPERFAMILY SSF47384 113 191 2.75E-16 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SHALO_1173 ba5ae2e8103155e9294fd59d3dbe299e 201 Gene3D G3DSA:1.10.287.130 73 189 1.5E-22 T 18-10-2018 SHALO_1173 ba5ae2e8103155e9294fd59d3dbe299e 201 SMART SM00388 130 195 3.1E-7 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_1173 ba5ae2e8103155e9294fd59d3dbe299e 201 SMART SM00304 76 129 2.4E-4 T 18-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 SHALO_1173 ba5ae2e8103155e9294fd59d3dbe299e 201 Pfam PF00512 His Kinase A (phospho-acceptor) domain 133 189 1.7E-10 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_1173 ba5ae2e8103155e9294fd59d3dbe299e 201 SUPERFAMILY SSF158472 79 126 1.31E-6 T 18-10-2018 SHALO_0462 465f570498c66628e945222fd00065c2 260 SMART SM00382 30 229 6.6E-10 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_0462 465f570498c66628e945222fd00065c2 260 Pfam PF00005 ABC transporter 22 181 6.0E-31 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_0462 465f570498c66628e945222fd00065c2 260 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 231 252 1.3E-5 T 18-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal SHALO_0462 465f570498c66628e945222fd00065c2 260 Gene3D G3DSA:3.40.50.300 2 253 6.9E-58 T 18-10-2018 SHALO_0462 465f570498c66628e945222fd00065c2 260 SUPERFAMILY SSF52540 4 252 3.02E-59 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_1023 7b9a1751c30dd2857f6b3d90d7915612 124 SUPERFAMILY SSF143120 67 110 3.92E-5 T 18-10-2018 IPR036165 YefM-like superfamily SHALO_0263 0a8050543eb75ea11bd03bf8cf8b321c 154 Pfam PF13359 DDE superfamily endonuclease 5 146 8.0E-18 T 18-10-2018 IPR027806 Harbinger transposase-derived nuclease domain SHALO_2844 989370af436d60088d00d7ea42baa7de 220 Gene3D G3DSA:1.10.10.10 132 219 1.7E-20 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_2844 989370af436d60088d00d7ea42baa7de 220 SUPERFAMILY SSF52172 1 170 2.56E-36 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_2844 989370af436d60088d00d7ea42baa7de 220 Gene3D G3DSA:3.40.50.2300 1 131 5.1E-33 T 18-10-2018 SHALO_2844 989370af436d60088d00d7ea42baa7de 220 SMART SM00862 146 217 1.5E-14 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_2844 989370af436d60088d00d7ea42baa7de 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 217 3.2E-16 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_2844 989370af436d60088d00d7ea42baa7de 220 Pfam PF00072 Response regulator receiver domain 3 112 9.6E-27 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_2844 989370af436d60088d00d7ea42baa7de 220 SMART SM00448 1 112 1.4E-34 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_2413 45ea84ade327a2aa951031468d2d2b35 122 Gene3D G3DSA:4.10.910.10 73 118 3.4E-24 T 18-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_2413 45ea84ade327a2aa951031468d2d2b35 122 SUPERFAMILY SSF46946 2 115 2.69E-43 T 18-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 SHALO_2413 45ea84ade327a2aa951031468d2d2b35 122 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 115 5.6E-53 T 18-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_2413 45ea84ade327a2aa951031468d2d2b35 122 Gene3D G3DSA:1.10.8.50 1 72 9.5E-29 T 18-10-2018 SHALO_2413 45ea84ade327a2aa951031468d2d2b35 122 Pfam PF00416 Ribosomal protein S13/S18 3 109 8.0E-32 T 18-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_2413 45ea84ade327a2aa951031468d2d2b35 122 ProSitePatterns PS00646 Ribosomal protein S13 signature. 88 101 - T 18-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_2413 45ea84ade327a2aa951031468d2d2b35 122 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 119 26.392 T 18-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_2413 45ea84ade327a2aa951031468d2d2b35 122 PIRSF PIRSF002134 1 122 4.6E-42 T 18-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_1639 5e07a1ecdc550cdddc3ff504ce64ebd0 386 SUPERFAMILY SSF103473 14 381 2.88E-31 T 18-10-2018 IPR036259 MFS transporter superfamily SHALO_1639 5e07a1ecdc550cdddc3ff504ce64ebd0 386 Pfam PF07690 Major Facilitator Superfamily 24 344 3.3E-9 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SHALO_1639 5e07a1ecdc550cdddc3ff504ce64ebd0 386 Gene3D G3DSA:1.20.1250.20 198 382 1.9E-17 T 18-10-2018 SHALO_1413 64fdda4ca13114e40662e9691fadfb20 334 PIRSF PIRSF005644 1 334 1.2E-125 T 18-10-2018 IPR011854 Carbamoyl dehydratase HypE SHALO_1413 64fdda4ca13114e40662e9691fadfb20 334 SUPERFAMILY SSF55326 3 150 5.06E-33 T 18-10-2018 IPR036921 PurM-like, N-terminal domain superfamily SHALO_1413 64fdda4ca13114e40662e9691fadfb20 334 Gene3D G3DSA:3.90.650.10 153 334 6.9E-55 T 18-10-2018 IPR036676 PurM-like, C-terminal domain superfamily SHALO_1413 64fdda4ca13114e40662e9691fadfb20 334 Pfam PF02769 AIR synthase related protein, C-terminal domain 161 310 1.6E-25 T 18-10-2018 IPR010918 PurM-like, C-terminal domain SHALO_1413 64fdda4ca13114e40662e9691fadfb20 334 Gene3D G3DSA:3.30.1330.10 7 152 3.9E-50 T 18-10-2018 IPR036921 PurM-like, N-terminal domain superfamily SHALO_1413 64fdda4ca13114e40662e9691fadfb20 334 TIGRFAM TIGR02124 hypE: hydrogenase expression/formation protein HypE 4 334 1.5E-139 T 18-10-2018 IPR011854 Carbamoyl dehydratase HypE SHALO_1413 64fdda4ca13114e40662e9691fadfb20 334 Pfam PF00586 AIR synthase related protein, N-terminal domain 37 149 5.2E-18 T 18-10-2018 IPR016188 PurM-like, N-terminal domain SHALO_1413 64fdda4ca13114e40662e9691fadfb20 334 SUPERFAMILY SSF56042 155 329 1.41E-39 T 18-10-2018 IPR036676 PurM-like, C-terminal domain superfamily SHALO_2006 d1a17aaa11cd734ec93e1303fd16bea8 226 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 37 204 4.3E-66 T 18-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 SHALO_2006 d1a17aaa11cd734ec93e1303fd16bea8 226 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 226 78.856 T 18-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 SHALO_2006 d1a17aaa11cd734ec93e1303fd16bea8 226 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 35 221 1.5E-56 T 18-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 SHALO_2006 d1a17aaa11cd734ec93e1303fd16bea8 226 SUPERFAMILY SSF55729 7 220 1.85E-80 T 18-10-2018 IPR016181 Acyl-CoA N-acyltransferase SHALO_2006 d1a17aaa11cd734ec93e1303fd16bea8 226 Gene3D G3DSA:3.40.630.70 64 226 4.9E-57 T 18-10-2018 SHALO_2006 d1a17aaa11cd734ec93e1303fd16bea8 226 Gene3D G3DSA:2.30.210.20 6 63 1.4E-24 T 18-10-2018 SHALO_1958 f359c03b8c6ab32855406351b7a71e9b 225 SUPERFAMILY SSF52172 1 160 2.13E-35 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_1958 f359c03b8c6ab32855406351b7a71e9b 225 Gene3D G3DSA:1.10.10.10 129 219 2.4E-12 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_1958 f359c03b8c6ab32855406351b7a71e9b 225 Gene3D G3DSA:3.40.50.2300 1 128 8.4E-34 T 18-10-2018 SHALO_1958 f359c03b8c6ab32855406351b7a71e9b 225 SMART SM00448 1 112 2.4E-36 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_1958 f359c03b8c6ab32855406351b7a71e9b 225 SMART SM00862 145 216 9.7E-9 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_1958 f359c03b8c6ab32855406351b7a71e9b 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 216 1.9E-10 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_1958 f359c03b8c6ab32855406351b7a71e9b 225 Pfam PF00072 Response regulator receiver domain 3 112 3.0E-26 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_1958 f359c03b8c6ab32855406351b7a71e9b 225 SUPERFAMILY SSF46894 145 216 2.38E-11 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHALO_0679 71b8cb6a5f070a77454f14e189894d9e 176 SUPERFAMILY SSF47928 4 101 8.11E-14 T 18-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SHALO_0679 71b8cb6a5f070a77454f14e189894d9e 176 Pfam PF00213 ATP synthase delta (OSCP) subunit 5 166 5.4E-21 T 18-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SHALO_0679 71b8cb6a5f070a77454f14e189894d9e 176 Hamap MF_01416 ATP synthase subunit delta [atpD]. 1 174 12.325 T 18-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SHALO_0679 71b8cb6a5f070a77454f14e189894d9e 176 Gene3D G3DSA:1.10.520.20 2 103 9.4E-8 T 18-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SHALO_1401 a26934af02d4e48a7443e1be2c6d02d2 582 ProSitePatterns PS00508 Nickel-dependent hydrogenases large subunit signature 2. 552 561 - T 18-10-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 SHALO_1401 a26934af02d4e48a7443e1be2c6d02d2 582 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 40 65 - T 18-10-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 SHALO_1401 a26934af02d4e48a7443e1be2c6d02d2 582 Pfam PF00374 Nickel-dependent hydrogenase 40 561 1.6E-205 T 18-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 SHALO_1401 a26934af02d4e48a7443e1be2c6d02d2 582 SUPERFAMILY SSF56762 1 561 5.1E-162 T 18-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_1401 a26934af02d4e48a7443e1be2c6d02d2 582 Gene3D G3DSA:1.10.645.10 1 561 6.3E-208 T 18-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_2425 3466759e77fae2b359d973ec92cb290b 74 SUPERFAMILY SSF50104 1 71 3.69E-24 T 18-10-2018 IPR008991 Translation protein SH3-like domain superfamily SHALO_2425 3466759e77fae2b359d973ec92cb290b 74 ProSitePatterns PS01108 Ribosomal protein L24 signature. 6 23 - T 18-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_2425 3466759e77fae2b359d973ec92cb290b 74 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 1 72 1.2E-26 T 18-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_2425 3466759e77fae2b359d973ec92cb290b 74 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 1 74 15.719 T 18-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_2425 3466759e77fae2b359d973ec92cb290b 74 SMART SM00739 2 29 3.0E-7 T 18-10-2018 IPR005824 KOW SHALO_2425 3466759e77fae2b359d973ec92cb290b 74 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 38 72 1.4E-8 T 18-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_2425 3466759e77fae2b359d973ec92cb290b 74 Gene3D G3DSA:2.30.30.1090 1 68 3.2E-27 T 18-10-2018 SHALO_2425 3466759e77fae2b359d973ec92cb290b 74 Pfam PF00467 KOW motif 5 36 5.4E-9 T 18-10-2018 IPR005824 KOW SHALO_2650 e2d22ad881a603c6e20d8e906cf2f05b 342 Gene3D G3DSA:3.40.50.300 4 246 1.4E-54 T 18-10-2018 SHALO_2650 e2d22ad881a603c6e20d8e906cf2f05b 342 SUPERFAMILY SSF52540 4 221 2.45E-50 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_2650 e2d22ad881a603c6e20d8e906cf2f05b 342 Pfam PF00005 ABC transporter 19 162 2.2E-28 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_2650 e2d22ad881a603c6e20d8e906cf2f05b 342 SUPERFAMILY SSF50331 218 336 2.83E-7 T 18-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal SHALO_2650 e2d22ad881a603c6e20d8e906cf2f05b 342 SMART SM00382 27 211 4.5E-10 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_1199 cea24414ead499d8936236500f52265e 140 SUPERFAMILY SSF52172 9 123 2.28E-30 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_1199 cea24414ead499d8936236500f52265e 140 Gene3D G3DSA:3.40.50.2300 6 128 3.7E-30 T 18-10-2018 SHALO_1199 cea24414ead499d8936236500f52265e 140 Pfam PF00072 Response regulator receiver domain 12 120 1.2E-23 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_1199 cea24414ead499d8936236500f52265e 140 SMART SM00448 9 120 6.1E-26 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_2292 1acef4cac54697c5886db39c46107b54 376 Pfam PF03916 Polysulphide reductase, NrfD 17 318 9.0E-43 T 18-10-2018 IPR005614 NrfD family SHALO_0650 5a63f1dbde83dc34fef5e8801f16fd18 452 Gene3D G3DSA:3.90.1300.10 3 451 3.8E-158 T 18-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SHALO_0650 5a63f1dbde83dc34fef5e8801f16fd18 452 SUPERFAMILY SSF75304 49 450 1.7E-133 T 18-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SHALO_0650 5a63f1dbde83dc34fef5e8801f16fd18 452 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 4 451 79.673 T 18-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SHALO_0650 5a63f1dbde83dc34fef5e8801f16fd18 452 Pfam PF01425 Amidase 45 440 4.8E-135 T 18-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SHALO_0650 5a63f1dbde83dc34fef5e8801f16fd18 452 ProSitePatterns PS00571 Amidases signature. 129 160 - T 18-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 SHALO_0650 5a63f1dbde83dc34fef5e8801f16fd18 452 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 5 450 4.1E-166 T 18-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SHALO_1330 c7aa5fc8511acf678079b3010a0e80bb 90 Pfam PF01381 Helix-turn-helix 32 88 6.4E-8 T 18-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SHALO_1330 c7aa5fc8511acf678079b3010a0e80bb 90 SUPERFAMILY SSF47413 24 89 2.82E-10 T 18-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 SHALO_1330 c7aa5fc8511acf678079b3010a0e80bb 90 Gene3D G3DSA:1.10.260.40 16 89 6.3E-14 T 18-10-2018 SHALO_1330 c7aa5fc8511acf678079b3010a0e80bb 90 SMART SM00530 30 88 1.1E-6 T 18-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SHALO_0514 b0f5ad868f3710bc3f4a00f7e2b5562e 120 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 22 119 5.7E-32 T 18-10-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0514 b0f5ad868f3710bc3f4a00f7e2b5562e 120 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 1 120 16.422 T 18-10-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 SHALO_0514 b0f5ad868f3710bc3f4a00f7e2b5562e 120 Gene3D G3DSA:1.20.58.1610 2 120 3.3E-36 T 18-10-2018 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_1718 ca3d9734c1a98f86c84d679a41ebbec6 92 Gene3D G3DSA:1.10.287.10 1 89 2.9E-31 T 18-10-2018 SHALO_1718 ca3d9734c1a98f86c84d679a41ebbec6 92 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 1.0E-26 T 18-10-2018 SHALO_1718 ca3d9734c1a98f86c84d679a41ebbec6 92 SMART SM01387 8 88 8.1E-47 T 18-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_1718 ca3d9734c1a98f86c84d679a41ebbec6 92 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 20.838 T 18-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_1718 ca3d9734c1a98f86c84d679a41ebbec6 92 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 88 6.1E-35 T 18-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_1718 ca3d9734c1a98f86c84d679a41ebbec6 92 SUPERFAMILY SSF47060 4 89 6.18E-32 T 18-10-2018 IPR009068 S15/NS1, RNA-binding SHALO_1718 ca3d9734c1a98f86c84d679a41ebbec6 92 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 18-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_1718 ca3d9734c1a98f86c84d679a41ebbec6 92 Pfam PF00312 Ribosomal protein S15 8 88 1.6E-34 T 18-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_2739 6ca81e54d3e015d84a39c2a09c40c816 1200 SUPERFAMILY SSF160467 797 889 3.79E-17 T 18-10-2018 SHALO_2739 6ca81e54d3e015d84a39c2a09c40c816 1200 SMART SM00878 336 440 2.7E-46 T 18-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 SHALO_2739 6ca81e54d3e015d84a39c2a09c40c816 1200 SUPERFAMILY SSF56059 83 354 1.01E-61 T 18-10-2018 SHALO_2739 6ca81e54d3e015d84a39c2a09c40c816 1200 SUPERFAMILY SSF51246 330 441 5.23E-34 T 18-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 SHALO_2739 6ca81e54d3e015d84a39c2a09c40c816 1200 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 18-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SHALO_2739 6ca81e54d3e015d84a39c2a09c40c816 1200 SUPERFAMILY SSF51230 1124 1196 1.7E-19 T 18-10-2018 IPR011053 Single hybrid motif SHALO_2739 6ca81e54d3e015d84a39c2a09c40c816 1200 SUPERFAMILY SSF52440 1 112 7.91E-46 T 18-10-2018 IPR016185 Pre-ATP-grasp domain superfamily SHALO_2739 6ca81e54d3e015d84a39c2a09c40c816 1200 Gene3D G3DSA:2.40.50.100 1125 1196 1.5E-23 T 18-10-2018 SHALO_2739 6ca81e54d3e015d84a39c2a09c40c816 1200 SMART SM00796 796 1029 2.3E-113 T 18-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D SHALO_2739 6ca81e54d3e015d84a39c2a09c40c816 1200 SUPERFAMILY SSF50891 913 1045 2.2E-26 T 18-10-2018 IPR029000 Cyclophilin-like domain superfamily SHALO_2739 6ca81e54d3e015d84a39c2a09c40c816 1200 Gene3D G3DSA:2.40.100.10 623 781 4.4E-60 T 18-10-2018 IPR029000 Cyclophilin-like domain superfamily SHALO_2739 6ca81e54d3e015d84a39c2a09c40c816 1200 Gene3D G3DSA:3.30.1360.40 782 874 2.9E-26 T 18-10-2018 SHALO_2739 6ca81e54d3e015d84a39c2a09c40c816 1200 Gene3D G3DSA:2.40.100.10 879 1101 1.4E-96 T 18-10-2018 IPR029000 Cyclophilin-like domain superfamily SHALO_2739 6ca81e54d3e015d84a39c2a09c40c816 1200 Pfam PF02785 Biotin carboxylase C-terminal domain 336 440 1.2E-33 T 18-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 SHALO_2739 6ca81e54d3e015d84a39c2a09c40c816 1200 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 472 743 4.3E-85 T 18-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B SHALO_2739 6ca81e54d3e015d84a39c2a09c40c816 1200 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 319 3.9E-61 T 18-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SHALO_2739 6ca81e54d3e015d84a39c2a09c40c816 1200 Gene3D G3DSA:3.30.470.130 1 445 1.0E-176 T 18-10-2018 SHALO_2739 6ca81e54d3e015d84a39c2a09c40c816 1200 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 152 166 - T 18-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SHALO_2739 6ca81e54d3e015d84a39c2a09c40c816 1200 TIGRFAM TIGR02712 urea_carbox: urea carboxylase 2 1196 0.0 T 18-10-2018 IPR014084 Urea carboxylase KEGG: 00220+3.5.1.54+6.3.4.6|KEGG: 00791+3.5.1.54+6.3.4.6|MetaCyc: PWY-5169|MetaCyc: PWY-5703 SHALO_2739 6ca81e54d3e015d84a39c2a09c40c816 1200 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 3.3E-44 T 18-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 SHALO_2739 6ca81e54d3e015d84a39c2a09c40c816 1200 Pfam PF00364 Biotin-requiring enzyme 1136 1196 6.4E-18 T 18-10-2018 IPR000089 Biotin/lipoyl attachment SHALO_2739 6ca81e54d3e015d84a39c2a09c40c816 1200 SMART SM00797 471 760 1.5E-157 T 18-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B SHALO_2739 6ca81e54d3e015d84a39c2a09c40c816 1200 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 797 1018 2.6E-48 T 18-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D SHALO_2739 6ca81e54d3e015d84a39c2a09c40c816 1200 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 449 765 2.0E-89 T 18-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B SHALO_2739 6ca81e54d3e015d84a39c2a09c40c816 1200 SUPERFAMILY SSF50891 624 749 2.16E-32 T 18-10-2018 IPR029000 Cyclophilin-like domain superfamily SHALO_2623 4fe3977789bb6e9bceac72e0b876bebf 223 SUPERFAMILY SSF54862 37 217 1.78E-54 T 18-10-2018 SHALO_2623 4fe3977789bb6e9bceac72e0b876bebf 223 Pfam PF13247 4Fe-4S dicluster domain 89 183 1.8E-20 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_2623 4fe3977789bb6e9bceac72e0b876bebf 223 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 127 138 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_2623 4fe3977789bb6e9bceac72e0b876bebf 223 Gene3D G3DSA:3.30.70.20 30 222 1.2E-51 T 18-10-2018 SHALO_1714 fe8beaa00e3d948650e4683feb4375be 188 Gene3D G3DSA:3.90.20.20 23 132 3.4E-24 T 18-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 SHALO_1714 fe8beaa00e3d948650e4683feb4375be 188 ProSitePatterns PS01071 grpE protein signature. 143 186 - T 18-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 SHALO_1714 fe8beaa00e3d948650e4683feb4375be 188 Gene3D G3DSA:2.30.22.10 133 188 3.4E-21 T 18-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 SHALO_1714 fe8beaa00e3d948650e4683feb4375be 188 SUPERFAMILY SSF51064 139 188 3.14E-16 T 18-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 SHALO_1714 fe8beaa00e3d948650e4683feb4375be 188 SUPERFAMILY SSF58014 35 133 1.96E-24 T 18-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 SHALO_1714 fe8beaa00e3d948650e4683feb4375be 188 PRINTS PR00773 GrpE protein signature 167 186 3.9E-29 T 18-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 SHALO_1714 fe8beaa00e3d948650e4683feb4375be 188 PRINTS PR00773 GrpE protein signature 140 155 3.9E-29 T 18-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 SHALO_1714 fe8beaa00e3d948650e4683feb4375be 188 PRINTS PR00773 GrpE protein signature 82 97 3.9E-29 T 18-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 SHALO_1714 fe8beaa00e3d948650e4683feb4375be 188 PRINTS PR00773 GrpE protein signature 54 70 3.9E-29 T 18-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 SHALO_1714 fe8beaa00e3d948650e4683feb4375be 188 Pfam PF01025 GrpE 28 188 1.1E-50 T 18-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 SHALO_1714 fe8beaa00e3d948650e4683feb4375be 188 Hamap MF_01151 Protein GrpE [grpE]. 2 188 20.525 T 18-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 SHALO_1045 3c2ecf3ee77a6d7ccaa9107f7e3956eb 1123 Pfam PF01841 Transglutaminase-like superfamily 133 245 2.5E-19 T 18-10-2018 IPR002931 Transglutaminase-like SHALO_1045 3c2ecf3ee77a6d7ccaa9107f7e3956eb 1123 Pfam PF09899 Putative amidoligase enzyme (DUF2126) 276 1117 0.0 T 18-10-2018 IPR018667 Domain of unknown function DUF2126 SHALO_1045 3c2ecf3ee77a6d7ccaa9107f7e3956eb 1123 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 7 82 9.5E-27 T 18-10-2018 IPR013589 Bacterial transglutaminase-like, N-terminal SHALO_1045 3c2ecf3ee77a6d7ccaa9107f7e3956eb 1123 SMART SM00460 172 248 5.0E-24 T 18-10-2018 IPR002931 Transglutaminase-like SHALO_1045 3c2ecf3ee77a6d7ccaa9107f7e3956eb 1123 Gene3D G3DSA:3.10.620.30 92 277 1.6E-26 T 18-10-2018 SHALO_1045 3c2ecf3ee77a6d7ccaa9107f7e3956eb 1123 SUPERFAMILY SSF54001 9 337 7.97E-71 T 18-10-2018 IPR038765 Papain-like cysteine peptidase superfamily SHALO_1554 d292a65d5630c68caf94fe9765fc1fd3 407 SUPERFAMILY SSF56349 104 394 2.53E-51 T 18-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SHALO_1554 d292a65d5630c68caf94fe9765fc1fd3 407 Pfam PF00589 Phage integrase family 216 384 6.1E-21 T 18-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SHALO_1554 d292a65d5630c68caf94fe9765fc1fd3 407 Gene3D G3DSA:3.30.160.390 6 95 2.9E-25 T 18-10-2018 IPR038488 Integrase, DNA-binding domain superfamily SHALO_1554 d292a65d5630c68caf94fe9765fc1fd3 407 Gene3D G3DSA:1.10.443.10 215 395 7.1E-15 T 18-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 SHALO_1554 d292a65d5630c68caf94fe9765fc1fd3 407 Gene3D G3DSA:1.10.150.130 101 212 2.3E-22 T 18-10-2018 IPR010998 Integrase/recombinase, N-terminal SHALO_1554 d292a65d5630c68caf94fe9765fc1fd3 407 Pfam PF13356 Arm DNA-binding domain 8 94 1.1E-13 T 18-10-2018 IPR025166 Integrase, DNA-binding domain SHALO_0364 07f69abece71922fa75738d3c7651478 142 SUPERFAMILY SSF51206 9 131 1.3E-17 T 18-10-2018 IPR018490 Cyclic nucleotide-binding-like SHALO_0364 07f69abece71922fa75738d3c7651478 142 Pfam PF00027 Cyclic nucleotide-binding domain 29 111 1.4E-6 T 18-10-2018 IPR000595 Cyclic nucleotide-binding domain SHALO_0364 07f69abece71922fa75738d3c7651478 142 Gene3D G3DSA:2.60.120.10 7 131 9.6E-15 T 18-10-2018 IPR014710 RmlC-like jelly roll fold SHALO_0498 26ccf9cf233f7547c9e0f1de6a24b2d2 483 Pfam PF13682 Chemoreceptor zinc-binding domain 373 436 1.4E-10 T 18-10-2018 IPR025991 Chemoreceptor zinc-binding domain SHALO_0498 26ccf9cf233f7547c9e0f1de6a24b2d2 483 SMART SM00283 151 394 8.4E-27 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_0498 26ccf9cf233f7547c9e0f1de6a24b2d2 483 Gene3D G3DSA:1.10.287.950 94 394 1.8E-48 T 18-10-2018 SHALO_0498 26ccf9cf233f7547c9e0f1de6a24b2d2 483 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 231 363 4.2E-33 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_0498 26ccf9cf233f7547c9e0f1de6a24b2d2 483 SUPERFAMILY SSF58104 94 373 3.53E-47 T 18-10-2018 SHALO_0143 6a6fedc8593174c45d7399bbca87ceb2 224 SMART SM00862 150 221 3.6E-16 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_0143 6a6fedc8593174c45d7399bbca87ceb2 224 SMART SM00448 4 115 1.0E-30 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_0143 6a6fedc8593174c45d7399bbca87ceb2 224 SUPERFAMILY SSF52172 1 180 3.7E-33 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_0143 6a6fedc8593174c45d7399bbca87ceb2 224 Gene3D G3DSA:3.40.50.2300 1 130 2.5E-30 T 18-10-2018 SHALO_0143 6a6fedc8593174c45d7399bbca87ceb2 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 221 3.7E-18 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_0143 6a6fedc8593174c45d7399bbca87ceb2 224 Gene3D G3DSA:1.10.10.10 131 223 2.2E-22 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_0143 6a6fedc8593174c45d7399bbca87ceb2 224 Pfam PF00072 Response regulator receiver domain 7 115 2.6E-22 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_1574 7a610deb7c7f795e96c42a6d7040e467 342 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 61 74 - T 18-10-2018 IPR018313 Solute-binding protein family 3, conserved site SHALO_1574 7a610deb7c7f795e96c42a6d7040e467 342 Gene3D G3DSA:3.40.190.10 125 230 2.2E-49 T 18-10-2018 SHALO_1574 7a610deb7c7f795e96c42a6d7040e467 342 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 252 4.1E-31 T 18-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SHALO_1574 7a610deb7c7f795e96c42a6d7040e467 342 Gene3D G3DSA:3.40.190.10 33 244 2.2E-49 T 18-10-2018 SHALO_1574 7a610deb7c7f795e96c42a6d7040e467 342 SMART SM00062 38 267 5.5E-51 T 18-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SHALO_1574 7a610deb7c7f795e96c42a6d7040e467 342 SUPERFAMILY SSF53850 29 255 1.3E-46 T 18-10-2018 SHALO_1477 3810a47d93649d138681603b02d194d6 276 SUPERFAMILY SSF46565 205 265 1.02E-12 T 18-10-2018 IPR036869 Chaperone J-domain superfamily SHALO_1477 3810a47d93649d138681603b02d194d6 276 Gene3D G3DSA:1.10.287.110 203 270 6.0E-11 T 18-10-2018 IPR036869 Chaperone J-domain superfamily SHALO_1477 3810a47d93649d138681603b02d194d6 276 SMART SM00271 206 269 6.2E-9 T 18-10-2018 IPR001623 DnaJ domain SHALO_1477 3810a47d93649d138681603b02d194d6 276 Pfam PF00226 DnaJ domain 208 265 9.4E-11 T 18-10-2018 IPR001623 DnaJ domain SHALO_2609 83a0d6f2725e2baca315f6ac80d826be 261 SMART SM00062 25 248 4.9E-64 T 18-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SHALO_2609 83a0d6f2725e2baca315f6ac80d826be 261 SUPERFAMILY SSF53850 10 245 1.81E-63 T 18-10-2018 SHALO_2609 83a0d6f2725e2baca315f6ac80d826be 261 Gene3D G3DSA:3.40.190.10 24 243 5.2E-66 T 18-10-2018 SHALO_2609 83a0d6f2725e2baca315f6ac80d826be 261 SMART SM00079 25 247 0.0016 T 18-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 SHALO_2609 83a0d6f2725e2baca315f6ac80d826be 261 Gene3D G3DSA:3.40.190.10 112 206 5.2E-66 T 18-10-2018 SHALO_2609 83a0d6f2725e2baca315f6ac80d826be 261 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 26 246 8.5E-61 T 18-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SHALO_0666 d71ca0562ca3f9b7afe1d95b5f5b8245 383 Gene3D G3DSA:2.30.42.10 61 150 9.7E-17 T 18-10-2018 SHALO_0666 d71ca0562ca3f9b7afe1d95b5f5b8245 383 Pfam PF03572 Peptidase family S41 180 362 1.1E-39 T 18-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 SHALO_0666 d71ca0562ca3f9b7afe1d95b5f5b8245 383 SUPERFAMILY SSF52096 13 367 2.49E-51 T 18-10-2018 IPR029045 ClpP/crotonase-like domain superfamily SHALO_0666 d71ca0562ca3f9b7afe1d95b5f5b8245 383 SMART SM00245 155 363 1.1E-35 T 18-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 SHALO_0666 d71ca0562ca3f9b7afe1d95b5f5b8245 383 Gene3D G3DSA:3.90.226.10 157 378 1.4E-44 T 18-10-2018 SHALO_0666 d71ca0562ca3f9b7afe1d95b5f5b8245 383 SMART SM00228 82 153 3.0E-14 T 18-10-2018 IPR001478 PDZ domain GO:0005515 SHALO_0666 d71ca0562ca3f9b7afe1d95b5f5b8245 383 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 92 148 8.8E-12 T 18-10-2018 IPR001478 PDZ domain GO:0005515 SHALO_0666 d71ca0562ca3f9b7afe1d95b5f5b8245 383 SUPERFAMILY SSF50156 74 163 3.55E-17 T 18-10-2018 IPR036034 PDZ superfamily GO:0005515 SHALO_2278 0e1b30b7487dccb250983c08fccc7cb6 496 Pfam PF01676 Metalloenzyme superfamily 7 483 2.6E-68 T 18-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 SHALO_2278 0e1b30b7487dccb250983c08fccc7cb6 496 SUPERFAMILY SSF53649 7 490 5.5E-65 T 18-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 SHALO_2278 0e1b30b7487dccb250983c08fccc7cb6 496 Gene3D G3DSA:3.40.720.10 8 491 4.8E-184 T 18-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 SHALO_2278 0e1b30b7487dccb250983c08fccc7cb6 496 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 6 491 4.5E-191 T 18-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SHALO_2278 0e1b30b7487dccb250983c08fccc7cb6 496 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 84 286 3.9E-64 T 18-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SHALO_2278 0e1b30b7487dccb250983c08fccc7cb6 496 Gene3D G3DSA:3.40.1450.10 79 299 4.8E-184 T 18-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SHALO_2278 0e1b30b7487dccb250983c08fccc7cb6 496 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 6 496 42.459 T 18-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SHALO_2278 0e1b30b7487dccb250983c08fccc7cb6 496 PIRSF PIRSF001492 2 495 3.0E-180 T 18-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SHALO_2278 0e1b30b7487dccb250983c08fccc7cb6 496 SUPERFAMILY SSF64158 79 296 1.03E-71 T 18-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SHALO_2831 985a818cf0ad6ee122bf7f8ee53f9400 527 SUPERFAMILY SSF56425 299 472 4.19E-26 T 18-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_2831 985a818cf0ad6ee122bf7f8ee53f9400 527 Gene3D G3DSA:3.90.700.10 300 468 6.4E-118 T 18-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_2831 985a818cf0ad6ee122bf7f8ee53f9400 527 Pfam PF00890 FAD binding domain 47 512 2.3E-74 T 18-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_2831 985a818cf0ad6ee122bf7f8ee53f9400 527 Gene3D G3DSA:3.50.50.60 46 526 6.4E-118 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SHALO_2831 985a818cf0ad6ee122bf7f8ee53f9400 527 TIGRFAM TIGR01813 flavo_cyto_c: flavocytochrome c 47 525 4.0E-131 T 18-10-2018 IPR010960 Flavocytochrome c GO:0000104|GO:0055114 SHALO_2831 985a818cf0ad6ee122bf7f8ee53f9400 527 SUPERFAMILY SSF51905 35 527 6.06E-50 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SHALO_1770 a5ffa01495776c36ac364c510ccb2fc4 130 Gene3D G3DSA:3.40.250.10 19 127 1.4E-17 T 18-10-2018 IPR036873 Rhodanese-like domain superfamily SHALO_1770 a5ffa01495776c36ac364c510ccb2fc4 130 SUPERFAMILY SSF52821 26 124 2.23E-14 T 18-10-2018 IPR036873 Rhodanese-like domain superfamily SHALO_1770 a5ffa01495776c36ac364c510ccb2fc4 130 SMART SM00450 19 124 2.4E-5 T 18-10-2018 IPR001763 Rhodanese-like domain SHALO_1770 a5ffa01495776c36ac364c510ccb2fc4 130 Pfam PF00581 Rhodanese-like domain 30 118 1.1E-10 T 18-10-2018 IPR001763 Rhodanese-like domain SHALO_0379 0794246843e58bfa8cc4f1b09a410f99 290 SUPERFAMILY SSF52540 23 282 4.93E-48 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0379 0794246843e58bfa8cc4f1b09a410f99 290 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 24 262 8.1E-26 T 18-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 SHALO_0379 0794246843e58bfa8cc4f1b09a410f99 290 PIRSF PIRSF003092 1 290 6.7E-70 T 18-10-2018 IPR025501 ATP binding protein MinD SHALO_0379 0794246843e58bfa8cc4f1b09a410f99 290 Gene3D G3DSA:3.40.50.300 23 263 1.9E-53 T 18-10-2018 SHALO_1436 aa6db41437b8e74ff4066c632b583bb9 225 SUPERFAMILY SSF51419 4 224 1.16E-60 T 18-10-2018 IPR029066 PLP-binding barrel SHALO_1436 aa6db41437b8e74ff4066c632b583bb9 225 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 8 225 8.0E-66 T 18-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 SHALO_1436 aa6db41437b8e74ff4066c632b583bb9 225 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 8 225 24.565 T 18-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 SHALO_1436 aa6db41437b8e74ff4066c632b583bb9 225 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 77 91 - T 18-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 SHALO_1436 aa6db41437b8e74ff4066c632b583bb9 225 Gene3D G3DSA:3.20.20.10 1 225 1.8E-67 T 18-10-2018 IPR029066 PLP-binding barrel SHALO_1436 aa6db41437b8e74ff4066c632b583bb9 225 Pfam PF01168 Alanine racemase, N-terminal domain 11 224 8.3E-22 T 18-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 SHALO_1436 aa6db41437b8e74ff4066c632b583bb9 225 PIRSF PIRSF004848 2 225 2.0E-66 T 18-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 SHALO_0591 1942c1006fdbc603d4a3288a0fec868a 164 Gene3D G3DSA:3.40.50.1170 1 160 2.9E-25 T 18-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 SHALO_0591 1942c1006fdbc603d4a3288a0fec868a 164 Pfam PF00710 Asparaginase, N-terminal 3 154 1.6E-23 T 18-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 SHALO_0591 1942c1006fdbc603d4a3288a0fec868a 164 PRINTS PR00139 Asparaginase/glutaminase family signature 4 15 2.0E-6 T 18-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 SHALO_0591 1942c1006fdbc603d4a3288a0fec868a 164 PRINTS PR00139 Asparaginase/glutaminase family signature 76 94 2.0E-6 T 18-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 SHALO_0591 1942c1006fdbc603d4a3288a0fec868a 164 SUPERFAMILY SSF53774 1 157 4.32E-29 T 18-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 SHALO_0059 c419fa5f20cad40fdaa71237a2aa760e 421 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 111 123 - T 18-10-2018 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-4655427|Reactome: R-HSA-5334118 SHALO_0059 c419fa5f20cad40fdaa71237a2aa760e 421 SUPERFAMILY SSF53335 3 415 5.72E-74 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_0059 c419fa5f20cad40fdaa71237a2aa760e 421 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 101 414 8.2E-48 T 18-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 SHALO_0059 c419fa5f20cad40fdaa71237a2aa760e 421 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 396 414 - T 18-10-2018 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 SHALO_0059 c419fa5f20cad40fdaa71237a2aa760e 421 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 201 214 6.1E-15 T 18-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 SHALO_0059 c419fa5f20cad40fdaa71237a2aa760e 421 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 154 168 6.1E-15 T 18-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 SHALO_0059 c419fa5f20cad40fdaa71237a2aa760e 421 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 2 18 6.1E-15 T 18-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 SHALO_0059 c419fa5f20cad40fdaa71237a2aa760e 421 Pfam PF00145 C-5 cytosine-specific DNA methylase 3 42 3.8E-5 T 18-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 SHALO_0059 c419fa5f20cad40fdaa71237a2aa760e 421 Pfam PF00145 C-5 cytosine-specific DNA methylase 101 416 4.8E-54 T 18-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 SHALO_0867 63a86f31d0e85d49c7421f79c33b23d8 190 Gene3D G3DSA:3.30.230.40 1 83 1.6E-31 T 18-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 SHALO_0867 63a86f31d0e85d49c7421f79c33b23d8 190 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 2 190 34.964 T 18-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 SHALO_0867 63a86f31d0e85d49c7421f79c33b23d8 190 Gene3D G3DSA:3.30.230.40 88 190 3.3E-33 T 18-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 SHALO_0867 63a86f31d0e85d49c7421f79c33b23d8 190 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 29 171 2.5E-56 T 18-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 SHALO_0867 63a86f31d0e85d49c7421f79c33b23d8 190 SUPERFAMILY SSF54211 86 175 4.25E-27 T 18-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold SHALO_0867 63a86f31d0e85d49c7421f79c33b23d8 190 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 59 72 - T 18-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 SHALO_0867 63a86f31d0e85d49c7421f79c33b23d8 190 SUPERFAMILY SSF54211 3 80 2.53E-29 T 18-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold SHALO_0867 63a86f31d0e85d49c7421f79c33b23d8 190 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 153 165 - T 18-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 SHALO_0100 f50aabc9f41659beb5e1160e4849a129 302 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 116 130 - T 18-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHALO_0100 f50aabc9f41659beb5e1160e4849a129 302 SUPERFAMILY SSF55120 68 278 5.35E-47 T 18-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHALO_0100 f50aabc9f41659beb5e1160e4849a129 302 Pfam PF00849 RNA pseudouridylate synthase 79 226 2.2E-29 T 18-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHALO_0100 f50aabc9f41659beb5e1160e4849a129 302 Gene3D G3DSA:3.30.2350.10 63 290 3.5E-51 T 18-10-2018 SHALO_0832 b19d68dbfb3d68a35cfeb6f5f303fadd 567 Gene3D G3DSA:3.30.450.20 45 204 3.7E-50 T 18-10-2018 SHALO_0832 b19d68dbfb3d68a35cfeb6f5f303fadd 567 Pfam PF08269 Cache domain 50 205 6.1E-40 T 18-10-2018 IPR004010 Double Cache domain 2 SHALO_0832 b19d68dbfb3d68a35cfeb6f5f303fadd 567 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 440 562 2.7E-30 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_0832 b19d68dbfb3d68a35cfeb6f5f303fadd 567 SUPERFAMILY SSF58104 363 565 1.83E-44 T 18-10-2018 SHALO_0832 b19d68dbfb3d68a35cfeb6f5f303fadd 567 SMART SM00283 375 567 6.2E-7 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_0832 b19d68dbfb3d68a35cfeb6f5f303fadd 567 SMART SM01049 45 144 3.6E-21 T 18-10-2018 IPR033480 Single Cache domain 2 SHALO_0832 b19d68dbfb3d68a35cfeb6f5f303fadd 567 Gene3D G3DSA:1.10.287.950 300 566 7.7E-44 T 18-10-2018 SHALO_0025 fe020892eab514e2b09fee23dba81974 358 Gene3D G3DSA:1.10.287.950 60 260 1.6E-46 T 18-10-2018 SHALO_0025 fe020892eab514e2b09fee23dba81974 358 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 111 246 7.4E-35 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_0025 fe020892eab514e2b09fee23dba81974 358 SMART SM00283 37 296 1.1E-22 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_0025 fe020892eab514e2b09fee23dba81974 358 SUPERFAMILY SSF58104 60 259 7.06E-48 T 18-10-2018 SHALO_0025 fe020892eab514e2b09fee23dba81974 358 Gene3D G3DSA:1.20.120.30 261 354 3.4E-5 T 18-10-2018 SHALO_0025 fe020892eab514e2b09fee23dba81974 358 Pfam PF13682 Chemoreceptor zinc-binding domain 257 317 3.1E-7 T 18-10-2018 IPR025991 Chemoreceptor zinc-binding domain SHALO_2883 90735d10b8f9b21d0fccfbd4fd70655c 455 Gene3D G3DSA:3.30.565.10 302 450 2.5E-31 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_2883 90735d10b8f9b21d0fccfbd4fd70655c 455 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 432 1.4E-5 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_2883 90735d10b8f9b21d0fccfbd4fd70655c 455 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 413 1.4E-5 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_2883 90735d10b8f9b21d0fccfbd4fd70655c 455 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 450 1.4E-5 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_2883 90735d10b8f9b21d0fccfbd4fd70655c 455 SMART SM00387 346 453 3.2E-19 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_2883 90735d10b8f9b21d0fccfbd4fd70655c 455 SUPERFAMILY SSF55874 309 450 5.24E-25 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_2883 90735d10b8f9b21d0fccfbd4fd70655c 455 Gene3D G3DSA:1.10.287.130 251 301 2.5E-31 T 18-10-2018 SHALO_2883 90735d10b8f9b21d0fccfbd4fd70655c 455 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 352 451 1.4E-11 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_2804 99a0456dee429b9c2ff98ba8877125e9 164 SUPERFAMILY SSF52309 1 146 4.58E-40 T 18-10-2018 SHALO_2804 99a0456dee429b9c2ff98ba8877125e9 164 Pfam PF05014 Nucleoside 2-deoxyribosyltransferase 4 140 1.8E-41 T 18-10-2018 IPR007710 Nucleoside 2-deoxyribosyltransferase Reactome: R-HSA-74259 SHALO_2804 99a0456dee429b9c2ff98ba8877125e9 164 Gene3D G3DSA:3.40.50.450 1 163 7.6E-51 T 18-10-2018 SHALO_0559 622ebb5f0e414e1f67ceff63fe408957 258 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 13 253 4.4E-63 T 18-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 SHALO_0559 622ebb5f0e414e1f67ceff63fe408957 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 181 203 3.1E-21 T 18-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 SHALO_0559 622ebb5f0e414e1f67ceff63fe408957 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 203 222 3.1E-21 T 18-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 SHALO_0559 622ebb5f0e414e1f67ceff63fe408957 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 22 43 3.1E-21 T 18-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 SHALO_0559 622ebb5f0e414e1f67ceff63fe408957 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 81 100 3.1E-21 T 18-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 SHALO_0559 622ebb5f0e414e1f67ceff63fe408957 258 Pfam PF01311 Bacterial export proteins, family 1 14 245 4.1E-55 T 18-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 SHALO_1476 2f26c590f0ab9dd2ac287107affde5e4 423 Gene3D G3DSA:1.10.10.60 357 416 2.0E-16 T 18-10-2018 SHALO_1476 2f26c590f0ab9dd2ac287107affde5e4 423 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 8 48 1.3E-9 T 18-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 SHALO_1476 2f26c590f0ab9dd2ac287107affde5e4 423 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 397 404 - T 18-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 SHALO_1476 2f26c590f0ab9dd2ac287107affde5e4 423 Pfam PF04552 Sigma-54, DNA binding domain 264 417 2.3E-45 T 18-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding SHALO_1476 2f26c590f0ab9dd2ac287107affde5e4 423 PRINTS PR00045 Sigma-54 factor signature 392 410 6.8E-14 T 18-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 SHALO_1476 2f26c590f0ab9dd2ac287107affde5e4 423 PRINTS PR00045 Sigma-54 factor signature 153 170 6.8E-14 T 18-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 SHALO_1476 2f26c590f0ab9dd2ac287107affde5e4 423 PRINTS PR00045 Sigma-54 factor signature 337 348 6.8E-14 T 18-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 SHALO_1476 2f26c590f0ab9dd2ac287107affde5e4 423 PRINTS PR00045 Sigma-54 factor signature 321 333 6.8E-14 T 18-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 SHALO_1476 2f26c590f0ab9dd2ac287107affde5e4 423 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 9 416 1.3E-98 T 18-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 SHALO_1476 2f26c590f0ab9dd2ac287107affde5e4 423 Pfam PF04963 Sigma-54 factor, core binding domain 79 255 3.1E-32 T 18-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 SHALO_1476 2f26c590f0ab9dd2ac287107affde5e4 423 PIRSF PIRSF000774 1 419 7.7E-69 T 18-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 SHALO_1476 2f26c590f0ab9dd2ac287107affde5e4 423 Gene3D G3DSA:1.10.10.1330 84 216 6.3E-25 T 18-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily SHALO_0478 8c564b3f8a6b5df911ada79f69fbae70 124 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 59 124 4.0E-18 T 18-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_0478 8c564b3f8a6b5df911ada79f69fbae70 124 SUPERFAMILY SSF54736 53 124 5.06E-24 T 18-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like SHALO_0478 8c564b3f8a6b5df911ada79f69fbae70 124 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 58 124 2.1E-29 T 18-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_0478 8c564b3f8a6b5df911ada79f69fbae70 124 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 50 2.6E-19 T 18-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_0478 8c564b3f8a6b5df911ada79f69fbae70 124 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 124 2.3E-48 T 18-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_0478 8c564b3f8a6b5df911ada79f69fbae70 124 Gene3D G3DSA:3.30.1390.10 54 124 5.9E-30 T 18-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like SHALO_0478 8c564b3f8a6b5df911ada79f69fbae70 124 Gene3D G3DSA:1.20.5.710 3 53 5.4E-20 T 18-10-2018 SHALO_0478 8c564b3f8a6b5df911ada79f69fbae70 124 SUPERFAMILY SSF48300 4 60 1.57E-15 T 18-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_0478 8c564b3f8a6b5df911ada79f69fbae70 124 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 124 24.259 T 18-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_2504 43c8a5da8b4ac175f7b5a44fc9223e0d 699 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 145 691 2.3E-144 T 18-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 SHALO_2504 43c8a5da8b4ac175f7b5a44fc9223e0d 699 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 614 626 2.0E-24 T 18-10-2018 SHALO_2504 43c8a5da8b4ac175f7b5a44fc9223e0d 699 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 247 261 2.0E-24 T 18-10-2018 SHALO_2504 43c8a5da8b4ac175f7b5a44fc9223e0d 699 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 591 610 2.0E-24 T 18-10-2018 SHALO_2504 43c8a5da8b4ac175f7b5a44fc9223e0d 699 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 389 403 2.0E-24 T 18-10-2018 SHALO_2504 43c8a5da8b4ac175f7b5a44fc9223e0d 699 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 538 548 2.0E-24 T 18-10-2018 SHALO_2504 43c8a5da8b4ac175f7b5a44fc9223e0d 699 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 515 526 2.0E-24 T 18-10-2018 SHALO_2504 43c8a5da8b4ac175f7b5a44fc9223e0d 699 Gene3D G3DSA:3.40.1110.10 400 522 6.3E-79 T 18-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 SHALO_2504 43c8a5da8b4ac175f7b5a44fc9223e0d 699 SUPERFAMILY SSF81653 210 296 1.83E-21 T 18-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 SHALO_2504 43c8a5da8b4ac175f7b5a44fc9223e0d 699 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 168 670 3.3E-73 T 18-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 SHALO_2504 43c8a5da8b4ac175f7b5a44fc9223e0d 699 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 391 397 - T 18-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 SHALO_2504 43c8a5da8b4ac175f7b5a44fc9223e0d 699 ProSitePatterns PS01229 Hypothetical cof family signature 2. 591 613 - T 18-10-2018 SHALO_2504 43c8a5da8b4ac175f7b5a44fc9223e0d 699 SUPERFAMILY SSF56784 387 691 2.28E-45 T 18-10-2018 IPR036412 HAD-like superfamily SHALO_2504 43c8a5da8b4ac175f7b5a44fc9223e0d 699 Gene3D G3DSA:2.70.150.20 181 300 3.4E-26 T 18-10-2018 SHALO_2504 43c8a5da8b4ac175f7b5a44fc9223e0d 699 Pfam PF00122 E1-E2 ATPase 210 362 8.7E-32 T 18-10-2018 SHALO_2504 43c8a5da8b4ac175f7b5a44fc9223e0d 699 Gene3D G3DSA:3.40.50.1000 370 643 6.3E-79 T 18-10-2018 IPR023214 HAD superfamily SHALO_2504 43c8a5da8b4ac175f7b5a44fc9223e0d 699 Pfam PF00702 haloacid dehalogenase-like hydrolase 385 605 1.4E-33 T 18-10-2018 SHALO_2858 c2292a438a906201f8e6b46d86938fb8 422 SUPERFAMILY SSF75615 101 157 5.75E-15 T 18-10-2018 SHALO_2858 c2292a438a906201f8e6b46d86938fb8 422 SUPERFAMILY SSF53790 172 406 2.22E-49 T 18-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 SHALO_2858 c2292a438a906201f8e6b46d86938fb8 422 Pfam PF14824 Sirohaem biosynthesis protein central 112 138 2.2E-10 T 18-10-2018 IPR028281 Siroheme synthase, central domain KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 SHALO_2858 c2292a438a906201f8e6b46d86938fb8 422 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 7 155 4.3E-27 T 18-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 SHALO_2858 c2292a438a906201f8e6b46d86938fb8 422 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 254 287 - T 18-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 SHALO_2858 c2292a438a906201f8e6b46d86938fb8 422 PIRSF PIRSF036426 1 171 2.6E-33 T 18-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 SHALO_2858 c2292a438a906201f8e6b46d86938fb8 422 PIRSF PIRSF036426 158 420 2.2E-73 T 18-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 SHALO_2858 c2292a438a906201f8e6b46d86938fb8 422 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 175 386 1.4E-27 T 18-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 SHALO_2858 c2292a438a906201f8e6b46d86938fb8 422 Gene3D G3DSA:3.30.160.110 107 141 8.7E-11 T 18-10-2018 SHALO_2858 c2292a438a906201f8e6b46d86938fb8 422 Gene3D G3DSA:3.40.50.720 2 104 5.6E-12 T 18-10-2018 SHALO_2858 c2292a438a906201f8e6b46d86938fb8 422 Gene3D G3DSA:3.30.950.10 290 421 5.2E-18 T 18-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 SHALO_2858 c2292a438a906201f8e6b46d86938fb8 422 Pfam PF13241 Putative NAD(P)-binding 6 108 1.8E-13 T 18-10-2018 SHALO_2858 c2292a438a906201f8e6b46d86938fb8 422 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 174 407 1.0E-56 T 18-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 SHALO_2858 c2292a438a906201f8e6b46d86938fb8 422 SUPERFAMILY SSF51735 6 106 1.81E-7 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_2858 c2292a438a906201f8e6b46d86938fb8 422 Gene3D G3DSA:3.40.1010.10 173 289 2.9E-30 T 18-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 SHALO_1633 235a4bccb19b8966f9e5be8a9b3e902d 419 Gene3D G3DSA:3.40.50.11440 30 265 1.9E-126 T 18-10-2018 SHALO_1633 235a4bccb19b8966f9e5be8a9b3e902d 419 Gene3D G3DSA:3.90.226.30 6 409 1.9E-126 T 18-10-2018 SHALO_1633 235a4bccb19b8966f9e5be8a9b3e902d 419 Pfam PF09861 Domain of unknown function (DUF2088) 7 205 2.0E-62 T 18-10-2018 IPR018657 LarA-like, N-terminal GO:0050043 KEGG: 00620+5.1.2.1 SHALO_0301 34c69129fd9d2ce8fc23d8386a60ae78 219 SUPERFAMILY SSF52172 1 168 1.57E-34 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_0301 34c69129fd9d2ce8fc23d8386a60ae78 219 SUPERFAMILY SSF46894 146 217 8.84E-12 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHALO_0301 34c69129fd9d2ce8fc23d8386a60ae78 219 Pfam PF00072 Response regulator receiver domain 3 112 2.0E-24 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_0301 34c69129fd9d2ce8fc23d8386a60ae78 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 217 2.5E-13 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_0301 34c69129fd9d2ce8fc23d8386a60ae78 219 SMART SM00448 1 112 8.7E-34 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_0301 34c69129fd9d2ce8fc23d8386a60ae78 219 SMART SM00862 147 217 6.3E-11 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_0301 34c69129fd9d2ce8fc23d8386a60ae78 219 Gene3D G3DSA:1.10.10.10 130 219 1.3E-16 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_0301 34c69129fd9d2ce8fc23d8386a60ae78 219 Gene3D G3DSA:3.40.50.2300 1 129 6.3E-32 T 18-10-2018 SHALO_1705 07fc6a79d16abee435f3d47accd2ea7b 312 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 26 208 1.8E-30 T 18-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 SHALO_1705 07fc6a79d16abee435f3d47accd2ea7b 312 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 3 309 24.252 T 18-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 SHALO_1705 07fc6a79d16abee435f3d47accd2ea7b 312 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 217 301 1.8E-10 T 18-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 SHALO_1705 07fc6a79d16abee435f3d47accd2ea7b 312 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 27 207 1.5E-36 T 18-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 SHALO_1331 9dfa9021e9f7c8a53add06e526cf4bdb 356 SUPERFAMILY SSF55073 224 297 7.38E-9 T 18-10-2018 IPR029787 Nucleotide cyclase SHALO_1331 9dfa9021e9f7c8a53add06e526cf4bdb 356 TIGRFAM TIGR00277 HDIG: HDIG domain 27 115 3.8E-8 T 18-10-2018 IPR006675 HDIG domain SHALO_1331 9dfa9021e9f7c8a53add06e526cf4bdb 356 SUPERFAMILY SSF109604 16 186 5.11E-40 T 18-10-2018 SHALO_1331 9dfa9021e9f7c8a53add06e526cf4bdb 356 Gene3D G3DSA:3.30.70.270 205 323 1.8E-9 T 18-10-2018 SHALO_1331 9dfa9021e9f7c8a53add06e526cf4bdb 356 Pfam PF01966 HD domain 27 148 2.0E-18 T 18-10-2018 IPR006674 HD domain SHALO_1331 9dfa9021e9f7c8a53add06e526cf4bdb 356 Pfam PF00990 Diguanylate cyclase, GGDEF domain 227 295 6.2E-7 T 18-10-2018 IPR000160 GGDEF domain SHALO_1331 9dfa9021e9f7c8a53add06e526cf4bdb 356 SMART SM00471 22 157 2.5E-12 T 18-10-2018 IPR003607 HD/PDEase domain SHALO_1331 9dfa9021e9f7c8a53add06e526cf4bdb 356 Gene3D G3DSA:1.10.3210.10 3 194 2.9E-65 T 18-10-2018 SHALO_1200 75656e8d4d84d88d9df47f90df4005c1 410 SUPERFAMILY SSF52218 257 400 4.05E-31 T 18-10-2018 IPR029039 Flavoprotein-like superfamily SHALO_1200 75656e8d4d84d88d9df47f90df4005c1 410 Pfam PF00753 Metallo-beta-lactamase superfamily 36 173 3.5E-10 T 18-10-2018 IPR001279 Metallo-beta-lactamase SHALO_1200 75656e8d4d84d88d9df47f90df4005c1 410 SUPERFAMILY SSF56281 6 244 1.24E-42 T 18-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like SHALO_1200 75656e8d4d84d88d9df47f90df4005c1 410 SMART SM00849 36 225 2.0E-26 T 18-10-2018 IPR001279 Metallo-beta-lactamase SHALO_1200 75656e8d4d84d88d9df47f90df4005c1 410 Pfam PF00258 Flavodoxin 259 391 3.6E-7 T 18-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 SHALO_1200 75656e8d4d84d88d9df47f90df4005c1 410 Gene3D G3DSA:3.60.15.10 4 254 2.2E-83 T 18-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like SHALO_1200 75656e8d4d84d88d9df47f90df4005c1 410 Gene3D G3DSA:3.40.50.360 256 407 3.6E-36 T 18-10-2018 IPR029039 Flavoprotein-like superfamily SHALO_1200 75656e8d4d84d88d9df47f90df4005c1 410 PIRSF PIRSF005243 2 404 3.1E-119 T 18-10-2018 IPR016440 Rubredoxin-oxygen oxidoreductase GO:0009055|GO:0010181|GO:0016491|GO:0046872 SHALO_1473 be540f0a8a95cac457087ac23ee71a3b 327 SUPERFAMILY SSF52418 64 324 1.26E-89 T 18-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 SHALO_1473 be540f0a8a95cac457087ac23ee71a3b 327 Gene3D G3DSA:1.20.970.10 1 54 1.1E-9 T 18-10-2018 SHALO_1473 be540f0a8a95cac457087ac23ee71a3b 327 Pfam PF00591 Glycosyl transferase family, a/b domain 63 313 2.4E-84 T 18-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 SHALO_1473 be540f0a8a95cac457087ac23ee71a3b 327 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 1 322 2.4E-108 T 18-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 SHALO_1473 be540f0a8a95cac457087ac23ee71a3b 327 SUPERFAMILY SSF47648 1 55 2.62E-7 T 18-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 SHALO_1473 be540f0a8a95cac457087ac23ee71a3b 327 Gene3D G3DSA:3.40.1030.10 60 326 9.4E-101 T 18-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 SHALO_1473 be540f0a8a95cac457087ac23ee71a3b 327 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 1 323 32.366 T 18-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 SHALO_1473 be540f0a8a95cac457087ac23ee71a3b 327 Pfam PF02885 Glycosyl transferase family, helical bundle domain 3 51 8.5E-6 T 18-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 SHALO_2536 d04a8de30b7a0bf07ec9a6d4b366ddf3 692 Gene3D G3DSA:2.40.170.20 25 692 1.6E-148 T 18-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily SHALO_2536 d04a8de30b7a0bf07ec9a6d4b366ddf3 692 Pfam PF07715 TonB-dependent Receptor Plug Domain 33 136 4.9E-17 T 18-10-2018 IPR012910 TonB-dependent receptor, plug domain SHALO_2536 d04a8de30b7a0bf07ec9a6d4b366ddf3 692 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 675 692 - T 18-10-2018 IPR010917 TonB-dependent receptor, conserved site SHALO_2536 d04a8de30b7a0bf07ec9a6d4b366ddf3 692 Pfam PF00593 TonB dependent receptor 252 691 6.5E-48 T 18-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel SHALO_2536 d04a8de30b7a0bf07ec9a6d4b366ddf3 692 SUPERFAMILY SSF56935 14 692 2.24E-120 T 18-10-2018 SHALO_2426 a350376e07e25bbb8e65c3380a51dab0 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 2.3E-55 T 18-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SHALO_2426 a350376e07e25bbb8e65c3380a51dab0 122 SUPERFAMILY SSF50193 1 122 3.4E-52 T 18-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 SHALO_2426 a350376e07e25bbb8e65c3380a51dab0 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 18-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_2426 a350376e07e25bbb8e65c3380a51dab0 122 Gene3D G3DSA:2.40.150.20 1 122 1.3E-53 T 18-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 SHALO_2426 a350376e07e25bbb8e65c3380a51dab0 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 2.0E-57 T 18-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 SHALO_2426 a350376e07e25bbb8e65c3380a51dab0 122 SMART SM01374 1 122 3.4E-84 T 18-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SHALO_2426 a350376e07e25bbb8e65c3380a51dab0 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 26.541 T 18-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SHALO_2442 28bfb7714d4ebd68af3e598a0c03226f 177 Pfam PF10634 Fe2+ transport protein 26 174 7.7E-66 T 18-10-2018 IPR018470 Periplasmic metal-binding protein Tp34-type SHALO_2442 28bfb7714d4ebd68af3e598a0c03226f 177 PIRSF PIRSF017018 1 177 6.3E-71 T 18-10-2018 IPR018470 Periplasmic metal-binding protein Tp34-type SHALO_2442 28bfb7714d4ebd68af3e598a0c03226f 177 Gene3D G3DSA:2.60.40.2480 25 177 6.4E-70 T 18-10-2018 IPR038482 Periplasmic metal-binding protein tp34-type superfamily SHALO_1928 23a93003adbc9fb2af9d8ca1b4458976 436 Gene3D G3DSA:3.40.50.300 215 433 2.8E-50 T 18-10-2018 SHALO_1928 23a93003adbc9fb2af9d8ca1b4458976 436 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 18-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site SHALO_1928 23a93003adbc9fb2af9d8ca1b4458976 436 Pfam PF00270 DEAD/DEAH box helicase 25 196 1.7E-47 T 18-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SHALO_1928 23a93003adbc9fb2af9d8ca1b4458976 436 SMART SM00490 259 340 7.9E-31 T 18-10-2018 IPR001650 Helicase, C-terminal SHALO_1928 23a93003adbc9fb2af9d8ca1b4458976 436 Pfam PF00271 Helicase conserved C-terminal domain 241 340 9.4E-27 T 18-10-2018 IPR001650 Helicase, C-terminal SHALO_1928 23a93003adbc9fb2af9d8ca1b4458976 436 SMART SM00487 20 223 7.9E-48 T 18-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain SHALO_1928 23a93003adbc9fb2af9d8ca1b4458976 436 SUPERFAMILY SSF52540 77 360 3.44E-67 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_1928 23a93003adbc9fb2af9d8ca1b4458976 436 Gene3D G3DSA:3.40.50.300 1 212 3.8E-72 T 18-10-2018 SHALO_1978 d081329ca80c08c5722919e65d94b777 611 Pfam PF00271 Helicase conserved C-terminal domain 414 486 1.0E-5 T 18-10-2018 IPR001650 Helicase, C-terminal SHALO_1978 d081329ca80c08c5722919e65d94b777 611 Gene3D G3DSA:1.10.8.630 5 100 1.6E-7 T 18-10-2018 SHALO_1978 d081329ca80c08c5722919e65d94b777 611 SMART SM00490 389 486 9.2E-7 T 18-10-2018 IPR001650 Helicase, C-terminal SHALO_1978 d081329ca80c08c5722919e65d94b777 611 TIGRFAM TIGR00595 priA: primosomal protein N' 129 596 3.6E-149 T 18-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 SHALO_1978 d081329ca80c08c5722919e65d94b777 611 Gene3D G3DSA:3.40.50.300 101 283 1.5E-59 T 18-10-2018 SHALO_1978 d081329ca80c08c5722919e65d94b777 611 Hamap MF_00983 Probable primosomal protein N' [priA]. 6 610 19.577 T 18-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 SHALO_1978 d081329ca80c08c5722919e65d94b777 611 Pfam PF00270 DEAD/DEAH box helicase 115 268 3.4E-13 T 18-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SHALO_1978 d081329ca80c08c5722919e65d94b777 611 SUPERFAMILY SSF52540 123 488 4.46E-34 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_1978 d081329ca80c08c5722919e65d94b777 611 SMART SM00487 107 299 2.9E-16 T 18-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain SHALO_2331 32f903f8e89e5669ecca82eea929d56a 402 Pfam PF00375 Sodium:dicarboxylate symporter family 13 394 4.9E-59 T 18-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 SHALO_2331 32f903f8e89e5669ecca82eea929d56a 402 Gene3D G3DSA:1.10.3860.10 2 400 3.1E-65 T 18-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 SHALO_2331 32f903f8e89e5669ecca82eea929d56a 402 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 1 402 34.786 T 18-10-2018 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 SHALO_2331 32f903f8e89e5669ecca82eea929d56a 402 PRINTS PR00173 Glutamate-aspartate symporter signature 219 238 2.8E-13 T 18-10-2018 SHALO_2331 32f903f8e89e5669ecca82eea929d56a 402 PRINTS PR00173 Glutamate-aspartate symporter signature 11 31 2.8E-13 T 18-10-2018 SHALO_2331 32f903f8e89e5669ecca82eea929d56a 402 PRINTS PR00173 Glutamate-aspartate symporter signature 321 340 2.8E-13 T 18-10-2018 SHALO_2331 32f903f8e89e5669ecca82eea929d56a 402 PRINTS PR00173 Glutamate-aspartate symporter signature 184 203 2.8E-13 T 18-10-2018 SHALO_2331 32f903f8e89e5669ecca82eea929d56a 402 PRINTS PR00173 Glutamate-aspartate symporter signature 286 312 2.8E-13 T 18-10-2018 SHALO_2331 32f903f8e89e5669ecca82eea929d56a 402 SUPERFAMILY SSF118215 13 396 4.58E-88 T 18-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 SHALO_1767 a7f620cd6c8a397d4fca334a985425a2 623 SUPERFAMILY SSF110942 508 620 1.01E-32 T 18-10-2018 IPR037196 HSP90, C-terminal domain SHALO_1767 a7f620cd6c8a397d4fca334a985425a2 623 Gene3D G3DSA:3.30.565.10 3 207 2.9E-81 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_1767 a7f620cd6c8a397d4fca334a985425a2 623 Hamap MF_00505 Chaperone protein HtpG [htpG]. 1 620 30.654 T 18-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 SHALO_1767 a7f620cd6c8a397d4fca334a985425a2 623 Gene3D G3DSA:3.30.230.80 248 397 4.4E-62 T 18-10-2018 SHALO_1767 a7f620cd6c8a397d4fca334a985425a2 623 PRINTS PR00775 90kDa heat shock protein signature 185 203 4.7E-63 T 18-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal SHALO_1767 a7f620cd6c8a397d4fca334a985425a2 623 PRINTS PR00775 90kDa heat shock protein signature 2 22 4.7E-63 T 18-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal SHALO_1767 a7f620cd6c8a397d4fca334a985425a2 623 PRINTS PR00775 90kDa heat shock protein signature 23 45 4.7E-63 T 18-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal SHALO_1767 a7f620cd6c8a397d4fca334a985425a2 623 PRINTS PR00775 90kDa heat shock protein signature 90 107 4.7E-63 T 18-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal SHALO_1767 a7f620cd6c8a397d4fca334a985425a2 623 PRINTS PR00775 90kDa heat shock protein signature 167 184 4.7E-63 T 18-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal SHALO_1767 a7f620cd6c8a397d4fca334a985425a2 623 PRINTS PR00775 90kDa heat shock protein signature 72 89 4.7E-63 T 18-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal SHALO_1767 a7f620cd6c8a397d4fca334a985425a2 623 PRINTS PR00775 90kDa heat shock protein signature 117 139 4.7E-63 T 18-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal SHALO_1767 a7f620cd6c8a397d4fca334a985425a2 623 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 22 160 8.2E-14 T 18-10-2018 SHALO_1767 a7f620cd6c8a397d4fca334a985425a2 623 Gene3D G3DSA:3.30.70.2140 208 229 2.9E-81 T 18-10-2018 SHALO_1767 a7f620cd6c8a397d4fca334a985425a2 623 Gene3D G3DSA:1.20.120.790 487 620 6.1E-39 T 18-10-2018 IPR037196 HSP90, C-terminal domain SHALO_1767 a7f620cd6c8a397d4fca334a985425a2 623 PIRSF PIRSF002583 1 623 2.6E-211 T 18-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 SHALO_1767 a7f620cd6c8a397d4fca334a985425a2 623 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 22 31 - T 18-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 SHALO_1767 a7f620cd6c8a397d4fca334a985425a2 623 Gene3D G3DSA:3.40.50.11260 398 484 7.1E-26 T 18-10-2018 SHALO_1767 a7f620cd6c8a397d4fca334a985425a2 623 SUPERFAMILY SSF55874 2 209 3.54E-67 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_1767 a7f620cd6c8a397d4fca334a985425a2 623 Pfam PF00183 Hsp90 protein 208 623 4.4E-114 T 18-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 SHALO_1767 a7f620cd6c8a397d4fca334a985425a2 623 SUPERFAMILY SSF54211 231 483 3.11E-89 T 18-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold SHALO_1767 a7f620cd6c8a397d4fca334a985425a2 623 SMART SM00387 24 179 9.0E-7 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_2873 4699a1a19617f4c8d0f7c9d5e3a1ff2e 132 SUPERFAMILY SSF52788 1 124 1.57E-33 T 18-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily SHALO_2873 4699a1a19617f4c8d0f7c9d5e3a1ff2e 132 Gene3D G3DSA:3.40.50.2300 1 126 7.4E-34 T 18-10-2018 SHALO_2873 4699a1a19617f4c8d0f7c9d5e3a1ff2e 132 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 122 1.0E-16 T 18-10-2018 IPR023485 Phosphotyrosine protein phosphatase I SHALO_2873 4699a1a19617f4c8d0f7c9d5e3a1ff2e 132 SMART SM00226 2 129 2.5E-24 T 18-10-2018 IPR023485 Phosphotyrosine protein phosphatase I SHALO_1349 4dfc05d7b6f090be9c5ba7cd732d6987 452 Gene3D G3DSA:3.40.50.620 1 116 5.0E-25 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_1349 4dfc05d7b6f090be9c5ba7cd732d6987 452 Pfam PF00875 DNA photolyase 4 147 8.4E-32 T 18-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 SHALO_1349 4dfc05d7b6f090be9c5ba7cd732d6987 452 SUPERFAMILY SSF52425 4 153 1.07E-35 T 18-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 SHALO_1349 4dfc05d7b6f090be9c5ba7cd732d6987 452 Pfam PF03441 FAD binding domain of DNA photolyase 261 448 5.3E-59 T 18-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 SHALO_1349 4dfc05d7b6f090be9c5ba7cd732d6987 452 PRINTS PR00147 DNA photolyase signature 129 145 1.8E-20 T 18-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 SHALO_1349 4dfc05d7b6f090be9c5ba7cd732d6987 452 PRINTS PR00147 DNA photolyase signature 366 380 1.8E-20 T 18-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 SHALO_1349 4dfc05d7b6f090be9c5ba7cd732d6987 452 PRINTS PR00147 DNA photolyase signature 327 345 1.8E-20 T 18-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 SHALO_1349 4dfc05d7b6f090be9c5ba7cd732d6987 452 PRINTS PR00147 DNA photolyase signature 307 323 1.8E-20 T 18-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 SHALO_1349 4dfc05d7b6f090be9c5ba7cd732d6987 452 Gene3D G3DSA:1.10.579.10 279 452 9.4E-56 T 18-10-2018 SHALO_1349 4dfc05d7b6f090be9c5ba7cd732d6987 452 SUPERFAMILY SSF48173 205 450 5.89E-82 T 18-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 SHALO_1349 4dfc05d7b6f090be9c5ba7cd732d6987 452 Gene3D G3DSA:1.25.40.80 120 278 8.8E-26 T 18-10-2018 SHALO_1643 188ac309538c779e37ff4b88e35844cc 354 Pfam PF00589 Phage integrase family 169 340 2.5E-35 T 18-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SHALO_1643 188ac309538c779e37ff4b88e35844cc 354 Gene3D G3DSA:1.10.443.10 160 353 1.2E-39 T 18-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 SHALO_1643 188ac309538c779e37ff4b88e35844cc 354 SUPERFAMILY SSF56349 94 346 2.83E-40 T 18-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SHALO_1643 188ac309538c779e37ff4b88e35844cc 354 Hamap MF_02054 Tyrosine recombinase XerH [xerH]. 1 350 47.172 T 18-10-2018 IPR033683 Tyrosine recombinase XerH SHALO_0794 63c18569e9259d3fcfc83ba0b19e6c2b 437 PIRSF PIRSF015658 54 437 4.4E-170 T 18-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 SHALO_0794 63c18569e9259d3fcfc83ba0b19e6c2b 437 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 79 431 1.7E-167 T 18-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 SHALO_0794 63c18569e9259d3fcfc83ba0b19e6c2b 437 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 80 436 2.6E-159 T 18-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 SHALO_2012 2e6eeb66973f0609937607bda31120e5 75 SUPERFAMILY SSF117130 1 54 3.53E-16 T 18-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 SHALO_2012 2e6eeb66973f0609937607bda31120e5 75 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 47 5.0E-11 T 18-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 SHALO_2012 2e6eeb66973f0609937607bda31120e5 75 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 70 16.274 T 18-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 SHALO_2012 2e6eeb66973f0609937607bda31120e5 75 Pfam PF02599 Global regulator protein family 1 53 1.9E-19 T 18-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 SHALO_2012 2e6eeb66973f0609937607bda31120e5 75 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 64 2.6E-24 T 18-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 SHALO_2012 2e6eeb66973f0609937607bda31120e5 75 Gene3D G3DSA:3.30.70.1680 1 63 8.3E-22 T 18-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 SHALO_0795 7419806044f05ba62d4953448e925a33 525 Gene3D G3DSA:3.90.228.20 219 511 1.0E-217 T 18-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 SHALO_0795 7419806044f05ba62d4953448e925a33 525 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 11 525 55.238 T 18-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 SHALO_0795 7419806044f05ba62d4953448e925a33 525 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 5 525 1.8E-233 T 18-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 SHALO_0795 7419806044f05ba62d4953448e925a33 525 Gene3D G3DSA:2.170.8.10 37 333 1.0E-217 T 18-10-2018 SHALO_0795 7419806044f05ba62d4953448e925a33 525 SUPERFAMILY SSF53795 213 524 1.56E-133 T 18-10-2018 SHALO_0795 7419806044f05ba62d4953448e925a33 525 Pfam PF01293 Phosphoenolpyruvate carboxykinase 17 479 3.9E-219 T 18-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 SHALO_0795 7419806044f05ba62d4953448e925a33 525 Gene3D G3DSA:3.40.449.10 18 218 1.0E-217 T 18-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 SHALO_0795 7419806044f05ba62d4953448e925a33 525 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 249 264 - T 18-10-2018 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 SHALO_0795 7419806044f05ba62d4953448e925a33 525 PIRSF PIRSF006294 1 525 1.7E-237 T 18-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 SHALO_0795 7419806044f05ba62d4953448e925a33 525 SUPERFAMILY SSF68923 5 211 8.72E-79 T 18-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 SHALO_0553 5917483d788023fc91eda64e7ace7b00 246 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 3 228 2.8E-62 T 18-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 SHALO_0553 5917483d788023fc91eda64e7ace7b00 246 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 2 243 28.533 T 18-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 SHALO_0553 5917483d788023fc91eda64e7ace7b00 246 Gene3D G3DSA:3.20.20.70 1 246 7.0E-77 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_0553 5917483d788023fc91eda64e7ace7b00 246 SUPERFAMILY SSF51366 3 224 8.85E-67 T 18-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 SHALO_0553 5917483d788023fc91eda64e7ace7b00 246 Pfam PF00290 Tryptophan synthase alpha chain 2 241 6.8E-71 T 18-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 SHALO_0553 5917483d788023fc91eda64e7ace7b00 246 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 33 46 - T 18-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 SHALO_1362 309e6c0b519e2a1b2fc73c3a2d07e006 122 Pfam PF03646 FlaG protein 23 120 1.3E-24 T 18-10-2018 IPR005186 FlaG protein SHALO_1362 309e6c0b519e2a1b2fc73c3a2d07e006 122 SUPERFAMILY SSF160214 20 121 2.48E-25 T 18-10-2018 IPR035924 FlaG-like superfamily SHALO_1362 309e6c0b519e2a1b2fc73c3a2d07e006 122 Gene3D G3DSA:3.30.160.170 10 118 2.9E-18 T 18-10-2018 IPR035924 FlaG-like superfamily SHALO_0210 4b28a22eaae68629d4a06d4fba75b723 227 SMART SM00967 2 74 3.3E-8 T 18-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 SHALO_0210 4b28a22eaae68629d4a06d4fba75b723 227 Pfam PF00588 SpoU rRNA Methylase family 84 221 2.1E-33 T 18-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 SHALO_0210 4b28a22eaae68629d4a06d4fba75b723 227 SUPERFAMILY SSF55315 1 70 1.69E-8 T 18-10-2018 IPR029064 50S ribosomal protein L30e-like SHALO_0210 4b28a22eaae68629d4a06d4fba75b723 227 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 2 72 2.3E-8 T 18-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 SHALO_0210 4b28a22eaae68629d4a06d4fba75b723 227 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 2 225 3.1E-53 T 18-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 SHALO_0210 4b28a22eaae68629d4a06d4fba75b723 227 Gene3D G3DSA:3.30.1330.30 1 68 3.1E-5 T 18-10-2018 IPR029064 50S ribosomal protein L30e-like SHALO_0210 4b28a22eaae68629d4a06d4fba75b723 227 Gene3D G3DSA:3.40.1280.10 69 226 1.2E-40 T 18-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SHALO_0210 4b28a22eaae68629d4a06d4fba75b723 227 SUPERFAMILY SSF75217 62 221 9.16E-39 T 18-10-2018 IPR029028 Alpha/beta knot methyltransferases SHALO_0880 f14ca3b1b3272b3833a9a836f8f15bbd 278 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 3 148 9.6E-28 T 18-10-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 SHALO_0880 f14ca3b1b3272b3833a9a836f8f15bbd 278 SUPERFAMILY SSF56655 2 277 2.75E-67 T 18-10-2018 SHALO_0880 f14ca3b1b3272b3833a9a836f8f15bbd 278 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 1 278 28.731 T 18-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 SHALO_0880 f14ca3b1b3272b3833a9a836f8f15bbd 278 Gene3D G3DSA:3.30.540.10 1 150 7.6E-32 T 18-10-2018 SHALO_0880 f14ca3b1b3272b3833a9a836f8f15bbd 278 PIRSF PIRSF000904 1 278 2.2E-86 T 18-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 SHALO_0880 f14ca3b1b3272b3833a9a836f8f15bbd 278 Gene3D G3DSA:3.40.190.80 151 278 1.5E-42 T 18-10-2018 SHALO_0880 f14ca3b1b3272b3833a9a836f8f15bbd 278 PIRSF PIRSF500210 1 278 3.6E-85 T 18-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 SHALO_0880 f14ca3b1b3272b3833a9a836f8f15bbd 278 PRINTS PR01958 Sedoheptulose-1,7-bisphosphatase family signature 250 274 5.5E-18 T 18-10-2018 IPR023079 Sedoheptulose-1,7-bisphosphatase GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 SHALO_0880 f14ca3b1b3272b3833a9a836f8f15bbd 278 PRINTS PR01958 Sedoheptulose-1,7-bisphosphatase family signature 187 207 5.5E-18 T 18-10-2018 IPR023079 Sedoheptulose-1,7-bisphosphatase GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 SHALO_0880 f14ca3b1b3272b3833a9a836f8f15bbd 278 PRINTS PR01958 Sedoheptulose-1,7-bisphosphatase family signature 107 125 5.5E-18 T 18-10-2018 IPR023079 Sedoheptulose-1,7-bisphosphatase GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 SHALO_0880 f14ca3b1b3272b3833a9a836f8f15bbd 278 PRINTS PR01958 Sedoheptulose-1,7-bisphosphatase family signature 37 52 5.5E-18 T 18-10-2018 IPR023079 Sedoheptulose-1,7-bisphosphatase GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 SHALO_1194 3a6d5c49c5b5a239d8fc6b214fe05255 476 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 371 461 1.2E-11 T 18-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis SHALO_1194 3a6d5c49c5b5a239d8fc6b214fe05255 476 Gene3D G3DSA:3.30.420.130 356 472 3.8E-20 T 18-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily SHALO_1194 3a6d5c49c5b5a239d8fc6b214fe05255 476 TIGRFAM TIGR01290 nifB: nitrogenase cofactor biosynthesis protein NifB 18 468 3.0E-171 T 18-10-2018 IPR005980 Nitrogenase cofactor biosynthesis protein NifB GO:0009108|GO:0009399 SHALO_1194 3a6d5c49c5b5a239d8fc6b214fe05255 476 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 44 55 - T 18-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 SHALO_1194 3a6d5c49c5b5a239d8fc6b214fe05255 476 SUPERFAMILY SSF102114 34 266 5.89E-34 T 18-10-2018 SHALO_1194 3a6d5c49c5b5a239d8fc6b214fe05255 476 Pfam PF04055 Radical SAM superfamily 44 221 1.1E-24 T 18-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 SHALO_1194 3a6d5c49c5b5a239d8fc6b214fe05255 476 Gene3D G3DSA:3.20.20.70 31 328 1.8E-32 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_1194 3a6d5c49c5b5a239d8fc6b214fe05255 476 SMART SM00729 38 267 0.0082 T 18-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 SHALO_1194 3a6d5c49c5b5a239d8fc6b214fe05255 476 SUPERFAMILY SSF53146 359 461 4.06E-21 T 18-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily SHALO_2528 5bd71fa343532302997d3974a7aec0f7 127 Gene3D G3DSA:3.30.420.270 57 121 1.6E-7 T 18-10-2018 SHALO_2528 5bd71fa343532302997d3974a7aec0f7 127 Pfam PF02472 Biopolymer transport protein ExbD/TolR 7 124 1.2E-21 T 18-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 SHALO_2803 d2b6d2b55bd8a79a08571cfd779eb760 440 SMART SM00387 323 424 1.3E-8 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_2803 d2b6d2b55bd8a79a08571cfd779eb760 440 Gene3D G3DSA:3.30.565.10 287 422 1.7E-11 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_2803 d2b6d2b55bd8a79a08571cfd779eb760 440 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 327 411 1.5E-7 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_2803 d2b6d2b55bd8a79a08571cfd779eb760 440 Gene3D G3DSA:1.10.287.130 169 274 1.6E-11 T 18-10-2018 SHALO_2803 d2b6d2b55bd8a79a08571cfd779eb760 440 SUPERFAMILY SSF55874 285 426 1.83E-17 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_2137 b5f43218059a7bd5308d657373f88600 579 Gene3D G3DSA:1.10.645.20 186 544 3.8E-109 T 18-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_2137 b5f43218059a7bd5308d657373f88600 579 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 31 157 5.5E-23 T 18-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_2137 b5f43218059a7bd5308d657373f88600 579 SUPERFAMILY SSF143243 8 200 2.62E-40 T 18-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_2137 b5f43218059a7bd5308d657373f88600 579 Pfam PF00374 Nickel-dependent hydrogenase 224 292 6.8E-14 T 18-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 SHALO_2137 b5f43218059a7bd5308d657373f88600 579 SUPERFAMILY SSF56762 198 544 4.32E-104 T 18-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_2137 b5f43218059a7bd5308d657373f88600 579 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 93 144 2.0E-18 T 18-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_2137 b5f43218059a7bd5308d657373f88600 579 Gene3D G3DSA:3.30.460.80 4 139 1.6E-10 T 18-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_2137 b5f43218059a7bd5308d657373f88600 579 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 472 544 1.1E-9 T 18-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_2137 b5f43218059a7bd5308d657373f88600 579 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 302 470 1.7E-40 T 18-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_1073 4e2f3ed9e1bec09802a04157978247e7 328 Pfam PF01757 Acyltransferase family 13 315 4.6E-15 T 18-10-2018 IPR002656 Acyltransferase 3 GO:0016747 SHALO_0771 d7b12560fa1c87fcc2381d7e6df3e72c 747 Pfam PF01138 3' exoribonuclease family, domain 1 19 139 1.3E-15 T 18-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 SHALO_0771 d7b12560fa1c87fcc2381d7e6df3e72c 747 Pfam PF01138 3' exoribonuclease family, domain 1 352 484 1.2E-18 T 18-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 SHALO_0771 d7b12560fa1c87fcc2381d7e6df3e72c 747 Gene3D G3DSA:2.40.50.140 678 747 6.2E-20 T 18-10-2018 SHALO_0771 d7b12560fa1c87fcc2381d7e6df3e72c 747 Pfam PF00575 S1 RNA binding domain 679 735 3.8E-13 T 18-10-2018 IPR003029 S1 domain GO:0003676 SHALO_0771 d7b12560fa1c87fcc2381d7e6df3e72c 747 Pfam PF00013 KH domain 586 642 3.2E-9 T 18-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 SHALO_0771 d7b12560fa1c87fcc2381d7e6df3e72c 747 Gene3D G3DSA:3.30.1370.10 576 651 1.6E-14 T 18-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 SHALO_0771 d7b12560fa1c87fcc2381d7e6df3e72c 747 SMART SM00316 677 746 2.4E-15 T 18-10-2018 IPR022967 RNA-binding domain, S1 SHALO_0771 d7b12560fa1c87fcc2381d7e6df3e72c 747 SUPERFAMILY SSF50249 675 744 3.36E-15 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold SHALO_0771 d7b12560fa1c87fcc2381d7e6df3e72c 747 SUPERFAMILY SSF54791 584 652 4.24E-14 T 18-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 SHALO_0771 d7b12560fa1c87fcc2381d7e6df3e72c 747 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 273 349 1.6E-10 T 18-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SHALO_0771 d7b12560fa1c87fcc2381d7e6df3e72c 747 SUPERFAMILY SSF55666 141 256 9.35E-18 T 18-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 SHALO_0771 d7b12560fa1c87fcc2381d7e6df3e72c 747 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 1 746 26.361 T 18-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SHALO_0771 d7b12560fa1c87fcc2381d7e6df3e72c 747 SUPERFAMILY SSF55666 479 572 8.41E-24 T 18-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 SHALO_0771 d7b12560fa1c87fcc2381d7e6df3e72c 747 PIRSF PIRSF005499 1 746 2.6E-255 T 18-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SHALO_0771 d7b12560fa1c87fcc2381d7e6df3e72c 747 Pfam PF03725 3' exoribonuclease family, domain 2 143 196 7.4E-12 T 18-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 SHALO_0771 d7b12560fa1c87fcc2381d7e6df3e72c 747 Pfam PF03725 3' exoribonuclease family, domain 2 489 558 3.6E-7 T 18-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 SHALO_0771 d7b12560fa1c87fcc2381d7e6df3e72c 747 SUPERFAMILY SSF54211 320 516 2.38E-43 T 18-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold SHALO_0771 d7b12560fa1c87fcc2381d7e6df3e72c 747 Gene3D G3DSA:3.30.230.70 263 575 2.0E-97 T 18-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 SHALO_0771 d7b12560fa1c87fcc2381d7e6df3e72c 747 SUPERFAMILY SSF54211 2 139 7.09E-41 T 18-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold SHALO_0771 d7b12560fa1c87fcc2381d7e6df3e72c 747 SMART SM00322 580 646 3.3E-7 T 18-10-2018 IPR004087 K Homology domain GO:0003676 SHALO_1454 713e3290780bad3ad384aa841def070c 402 SUPERFAMILY SSF53067 160 398 3.09E-91 T 18-10-2018 SHALO_1454 713e3290780bad3ad384aa841def070c 402 SUPERFAMILY SSF53067 2 198 6.47E-65 T 18-10-2018 SHALO_1454 713e3290780bad3ad384aa841def070c 402 PRINTS PR00471 Acetate kinase family signature 3 14 3.1E-46 T 18-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 SHALO_1454 713e3290780bad3ad384aa841def070c 402 PRINTS PR00471 Acetate kinase family signature 206 227 3.1E-46 T 18-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 SHALO_1454 713e3290780bad3ad384aa841def070c 402 PRINTS PR00471 Acetate kinase family signature 176 189 3.1E-46 T 18-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 SHALO_1454 713e3290780bad3ad384aa841def070c 402 PRINTS PR00471 Acetate kinase family signature 324 340 3.1E-46 T 18-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 SHALO_1454 713e3290780bad3ad384aa841def070c 402 PRINTS PR00471 Acetate kinase family signature 379 391 3.1E-46 T 18-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 SHALO_1454 713e3290780bad3ad384aa841def070c 402 PRINTS PR00471 Acetate kinase family signature 302 315 3.1E-46 T 18-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 SHALO_1454 713e3290780bad3ad384aa841def070c 402 Pfam PF00871 Acetokinase family 2 391 1.6E-151 T 18-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 SHALO_1454 713e3290780bad3ad384aa841def070c 402 PIRSF PIRSF000722 1 402 2.9E-156 T 18-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 SHALO_1454 713e3290780bad3ad384aa841def070c 402 Gene3D G3DSA:3.30.420.40 199 402 1.5E-85 T 18-10-2018 SHALO_1454 713e3290780bad3ad384aa841def070c 402 Gene3D G3DSA:3.30.420.40 1 198 5.9E-70 T 18-10-2018 SHALO_1454 713e3290780bad3ad384aa841def070c 402 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 3 14 - T 18-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 SHALO_1454 713e3290780bad3ad384aa841def070c 402 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 206 223 - T 18-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 SHALO_1454 713e3290780bad3ad384aa841def070c 402 Hamap MF_00020 Acetate kinase [ackA]. 1 401 177.602 T 18-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 SHALO_1454 713e3290780bad3ad384aa841def070c 402 TIGRFAM TIGR00016 ackA: acetate kinase 2 398 9.5E-153 T 18-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 SHALO_2616 c00b8f411788c60e4eed89115597e2a5 225 SUPERFAMILY SSF52540 4 224 9.93E-55 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_2616 c00b8f411788c60e4eed89115597e2a5 225 SMART SM00382 33 222 1.5E-12 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_2616 c00b8f411788c60e4eed89115597e2a5 225 Pfam PF00005 ABC transporter 24 173 2.8E-32 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_2616 c00b8f411788c60e4eed89115597e2a5 225 Gene3D G3DSA:3.40.50.300 1 225 1.0E-56 T 18-10-2018 SHALO_2259 5fb9a99ff91a8dad7bef138f1221b7b9 202 PIRSF PIRSF000498 1 199 3.6E-60 T 18-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 SHALO_2259 5fb9a99ff91a8dad7bef138f1221b7b9 202 Gene3D G3DSA:2.40.30.20 1 78 2.1E-11 T 18-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 SHALO_2259 5fb9a99ff91a8dad7bef138f1221b7b9 202 Gene3D G3DSA:2.40.30.20 92 193 6.7E-31 T 18-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 SHALO_2259 5fb9a99ff91a8dad7bef138f1221b7b9 202 SUPERFAMILY SSF63380 83 185 2.47E-31 T 18-10-2018 IPR017938 Riboflavin synthase-like beta-barrel SHALO_2259 5fb9a99ff91a8dad7bef138f1221b7b9 202 Pfam PF00677 Lumazine binding domain 90 174 6.5E-24 T 18-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 SHALO_2259 5fb9a99ff91a8dad7bef138f1221b7b9 202 Pfam PF00677 Lumazine binding domain 3 70 2.9E-9 T 18-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 SHALO_2259 5fb9a99ff91a8dad7bef138f1221b7b9 202 SUPERFAMILY SSF63380 1 81 1.36E-12 T 18-10-2018 IPR017938 Riboflavin synthase-like beta-barrel SHALO_2259 5fb9a99ff91a8dad7bef138f1221b7b9 202 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 187 9.5E-58 T 18-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 SHALO_2401 961d90f1eb8381e77d19cac7ac10aa28 664 SUPERFAMILY SSF52518 338 511 4.16E-57 T 18-10-2018 IPR029061 Thiamin diphosphate-binding fold SHALO_2401 961d90f1eb8381e77d19cac7ac10aa28 664 Gene3D G3DSA:3.40.50.970 1 327 1.1E-112 T 18-10-2018 SHALO_2401 961d90f1eb8381e77d19cac7ac10aa28 664 ProSitePatterns PS00801 Transketolase signature 1. 15 35 - T 18-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 SHALO_2401 961d90f1eb8381e77d19cac7ac10aa28 664 SUPERFAMILY SSF52518 2 314 7.5E-103 T 18-10-2018 IPR029061 Thiamin diphosphate-binding fold SHALO_2401 961d90f1eb8381e77d19cac7ac10aa28 664 TIGRFAM TIGR00232 tktlase_bact: transketolase 8 639 7.6E-238 T 18-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 SHALO_2401 961d90f1eb8381e77d19cac7ac10aa28 664 ProSitePatterns PS00802 Transketolase signature 2. 454 470 - T 18-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 SHALO_2401 961d90f1eb8381e77d19cac7ac10aa28 664 SUPERFAMILY SSF52922 520 644 1.26E-34 T 18-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 SHALO_2401 961d90f1eb8381e77d19cac7ac10aa28 664 Pfam PF02779 Transketolase, pyrimidine binding domain 345 510 8.0E-39 T 18-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain SHALO_2401 961d90f1eb8381e77d19cac7ac10aa28 664 Gene3D G3DSA:3.40.50.970 328 520 8.9E-65 T 18-10-2018 SHALO_2401 961d90f1eb8381e77d19cac7ac10aa28 664 Gene3D G3DSA:3.40.50.920 524 652 9.0E-33 T 18-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 SHALO_2401 961d90f1eb8381e77d19cac7ac10aa28 664 SMART SM00861 345 511 5.1E-58 T 18-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain SHALO_2401 961d90f1eb8381e77d19cac7ac10aa28 664 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 8 315 1.3E-124 T 18-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 SHALO_0980 04d92171b93ad0fa7bdab84ecd9b9683 463 SMART SM00490 260 341 6.7E-27 T 18-10-2018 IPR001650 Helicase, C-terminal SHALO_0980 04d92171b93ad0fa7bdab84ecd9b9683 463 SMART SM00487 26 224 2.6E-56 T 18-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain SHALO_0980 04d92171b93ad0fa7bdab84ecd9b9683 463 Gene3D G3DSA:3.30.70.330 389 462 5.7E-21 T 18-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily SHALO_0980 04d92171b93ad0fa7bdab84ecd9b9683 463 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 155 163 - T 18-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site SHALO_0980 04d92171b93ad0fa7bdab84ecd9b9683 463 Pfam PF03880 DbpA RNA binding domain 390 459 2.4E-22 T 18-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain SHALO_0980 04d92171b93ad0fa7bdab84ecd9b9683 463 Gene3D G3DSA:3.40.50.300 215 385 3.3E-44 T 18-10-2018 SHALO_0980 04d92171b93ad0fa7bdab84ecd9b9683 463 Pfam PF00271 Helicase conserved C-terminal domain 235 340 3.0E-26 T 18-10-2018 IPR001650 Helicase, C-terminal SHALO_0980 04d92171b93ad0fa7bdab84ecd9b9683 463 Gene3D G3DSA:3.40.50.300 1 213 1.0E-71 T 18-10-2018 SHALO_0980 04d92171b93ad0fa7bdab84ecd9b9683 463 SUPERFAMILY SSF52540 77 358 6.79E-70 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0980 04d92171b93ad0fa7bdab84ecd9b9683 463 Pfam PF00270 DEAD/DEAH box helicase 31 197 1.0E-44 T 18-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SHALO_1837 0a110e06d6d5cbb46407ff42788c7899 630 SUPERFAMILY SSF56801 5 627 1.23E-104 T 18-10-2018 SHALO_1837 0a110e06d6d5cbb46407ff42788c7899 630 Pfam PF00501 AMP-binding enzyme 16 497 1.4E-94 T 18-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 SHALO_1837 0a110e06d6d5cbb46407ff42788c7899 630 Gene3D G3DSA:3.40.50.12780 1 321 3.1E-51 T 18-10-2018 SHALO_1837 0a110e06d6d5cbb46407ff42788c7899 630 ProSitePatterns PS00455 Putative AMP-binding domain signature. 184 195 - T 18-10-2018 IPR020845 AMP-binding, conserved site SHALO_1837 0a110e06d6d5cbb46407ff42788c7899 630 Gene3D G3DSA:3.40.50.12780 329 493 3.5E-36 T 18-10-2018 SHALO_1534 d3624f4d820e8cde8f3c4c71b244e96c 216 Gene3D G3DSA:3.40.50.360 1 172 1.1E-30 T 18-10-2018 IPR029039 Flavoprotein-like superfamily SHALO_1534 d3624f4d820e8cde8f3c4c71b244e96c 216 SUPERFAMILY SSF52218 1 210 1.08E-28 T 18-10-2018 IPR029039 Flavoprotein-like superfamily SHALO_1534 d3624f4d820e8cde8f3c4c71b244e96c 216 Pfam PF03358 NADPH-dependent FMN reductase 1 119 3.1E-16 T 18-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 SHALO_2486 f247f9bda57a49dfd3fc1c109c7ce7dd 259 PRINTS PR01077 Claudin family signature 96 117 4.4E-6 T 18-10-2018 SHALO_2486 f247f9bda57a49dfd3fc1c109c7ce7dd 259 PRINTS PR01077 Claudin family signature 63 85 4.4E-6 T 18-10-2018 SHALO_2486 f247f9bda57a49dfd3fc1c109c7ce7dd 259 PRINTS PR01077 Claudin family signature 150 174 4.4E-6 T 18-10-2018 SHALO_2486 f247f9bda57a49dfd3fc1c109c7ce7dd 259 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 17 240 6.9E-58 T 18-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 SHALO_0836 2a00dbf10f25e6b2ed921cc00dcf6f92 338 PRINTS PR00344 Bacterial sensor protein C-terminal signature 276 290 8.3E-10 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_0836 2a00dbf10f25e6b2ed921cc00dcf6f92 338 PRINTS PR00344 Bacterial sensor protein C-terminal signature 303 321 8.3E-10 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_0836 2a00dbf10f25e6b2ed921cc00dcf6f92 338 PRINTS PR00344 Bacterial sensor protein C-terminal signature 292 302 8.3E-10 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_0836 2a00dbf10f25e6b2ed921cc00dcf6f92 338 SUPERFAMILY SSF47384 124 191 9.22E-9 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SHALO_0836 2a00dbf10f25e6b2ed921cc00dcf6f92 338 Pfam PF00512 His Kinase A (phospho-acceptor) domain 131 191 7.9E-10 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_0836 2a00dbf10f25e6b2ed921cc00dcf6f92 338 Gene3D G3DSA:1.10.287.130 121 188 1.5E-11 T 18-10-2018 SHALO_0836 2a00dbf10f25e6b2ed921cc00dcf6f92 338 SMART SM00387 235 338 8.3E-13 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_0836 2a00dbf10f25e6b2ed921cc00dcf6f92 338 SUPERFAMILY SSF55874 192 329 1.31E-24 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_0836 2a00dbf10f25e6b2ed921cc00dcf6f92 338 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 240 332 7.3E-10 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_0836 2a00dbf10f25e6b2ed921cc00dcf6f92 338 SMART SM00388 131 195 3.0E-9 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_0836 2a00dbf10f25e6b2ed921cc00dcf6f92 338 Gene3D G3DSA:3.30.565.10 189 336 6.9E-25 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_2015 d5154b1dcec19a970f17c99e8683e3e7 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 1.5E-18 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SHALO_2015 d5154b1dcec19a970f17c99e8683e3e7 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.0E-7 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SHALO_2015 d5154b1dcec19a970f17c99e8683e3e7 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.0E-7 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SHALO_2015 d5154b1dcec19a970f17c99e8683e3e7 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.0E-7 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SHALO_2015 d5154b1dcec19a970f17c99e8683e3e7 301 Gene3D G3DSA:3.40.190.290 94 300 2.7E-15 T 18-10-2018 SHALO_2015 d5154b1dcec19a970f17c99e8683e3e7 301 SUPERFAMILY SSF53850 93 294 6.88E-19 T 18-10-2018 SHALO_2015 d5154b1dcec19a970f17c99e8683e3e7 301 Gene3D G3DSA:1.10.10.10 2 87 1.2E-22 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_2015 d5154b1dcec19a970f17c99e8683e3e7 301 SUPERFAMILY SSF46785 3 112 7.55E-21 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SHALO_2015 d5154b1dcec19a970f17c99e8683e3e7 301 Pfam PF03466 LysR substrate binding domain 95 295 7.0E-19 T 18-10-2018 IPR005119 LysR, substrate-binding SHALO_0858 109bead8bbd1758c95738a3855fdb6a2 276 SMART SM00267 99 274 2.7E-58 T 18-10-2018 IPR000160 GGDEF domain SHALO_0858 109bead8bbd1758c95738a3855fdb6a2 276 Pfam PF00990 Diguanylate cyclase, GGDEF domain 111 270 5.4E-48 T 18-10-2018 IPR000160 GGDEF domain SHALO_0858 109bead8bbd1758c95738a3855fdb6a2 276 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 106 274 7.8E-55 T 18-10-2018 IPR000160 GGDEF domain SHALO_0858 109bead8bbd1758c95738a3855fdb6a2 276 SUPERFAMILY SSF55073 115 273 3.45E-48 T 18-10-2018 IPR029787 Nucleotide cyclase SHALO_0858 109bead8bbd1758c95738a3855fdb6a2 276 Gene3D G3DSA:3.30.70.270 105 275 9.2E-56 T 18-10-2018 SHALO_1964 396a79a3fca0e57ec85c0a72edfe3738 290 SUPERFAMILY SSF56317 1 286 1.06E-79 T 18-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily SHALO_1964 396a79a3fca0e57ec85c0a72edfe3738 290 Gene3D G3DSA:3.60.110.10 1 290 9.7E-92 T 18-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily SHALO_1964 396a79a3fca0e57ec85c0a72edfe3738 290 Pfam PF00795 Carbon-nitrogen hydrolase 3 267 2.9E-56 T 18-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 SHALO_0298 100e213ff758ed4e2851772fec4a8d4b 840 SMART SM00086 382 424 2.3E-5 T 18-10-2018 IPR001610 PAC motif SHALO_0298 100e213ff758ed4e2851772fec4a8d4b 840 SMART SM00052 590 832 1.0E-44 T 18-10-2018 IPR001633 EAL domain SHALO_0298 100e213ff758ed4e2851772fec4a8d4b 840 SUPERFAMILY SSF55785 322 421 1.12E-25 T 18-10-2018 IPR035965 PAS domain superfamily SHALO_0298 100e213ff758ed4e2851772fec4a8d4b 840 SUPERFAMILY SSF55073 436 580 1.88E-17 T 18-10-2018 IPR029787 Nucleotide cyclase SHALO_0298 100e213ff758ed4e2851772fec4a8d4b 840 SMART SM00267 421 578 2.6E-7 T 18-10-2018 IPR000160 GGDEF domain SHALO_0298 100e213ff758ed4e2851772fec4a8d4b 840 Pfam PF00990 Diguanylate cyclase, GGDEF domain 435 574 7.7E-10 T 18-10-2018 IPR000160 GGDEF domain SHALO_0298 100e213ff758ed4e2851772fec4a8d4b 840 Pfam PF00563 EAL domain 597 827 2.2E-54 T 18-10-2018 IPR001633 EAL domain SHALO_0298 100e213ff758ed4e2851772fec4a8d4b 840 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 311 429 4.5E-16 T 18-10-2018 IPR000014 PAS domain SHALO_0298 100e213ff758ed4e2851772fec4a8d4b 840 SUPERFAMILY SSF141868 597 837 4.32E-61 T 18-10-2018 IPR035919 EAL domain superfamily SHALO_0298 100e213ff758ed4e2851772fec4a8d4b 840 Pfam PF05228 CHASE4 domain 52 188 6.6E-18 T 18-10-2018 IPR007892 CHASE4 SHALO_0298 100e213ff758ed4e2851772fec4a8d4b 840 Gene3D G3DSA:3.30.70.270 440 589 3.6E-14 T 18-10-2018 SHALO_0298 100e213ff758ed4e2851772fec4a8d4b 840 Gene3D G3DSA:3.20.20.450 595 839 1.8E-64 T 18-10-2018 IPR035919 EAL domain superfamily SHALO_0298 100e213ff758ed4e2851772fec4a8d4b 840 Gene3D G3DSA:3.30.450.20 301 439 9.7E-30 T 18-10-2018 SHALO_0298 100e213ff758ed4e2851772fec4a8d4b 840 Pfam PF08447 PAS fold 333 417 5.1E-14 T 18-10-2018 IPR013655 PAS fold-3 GO:0005515 SHALO_2378 25aa6fdce1c629722841e2e7667c690b 142 SUPERFAMILY SSF52161 4 138 4.71E-52 T 18-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 SHALO_2378 25aa6fdce1c629722841e2e7667c690b 142 PIRSF PIRSF002181 1 142 1.1E-45 T 18-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 SHALO_2378 25aa6fdce1c629722841e2e7667c690b 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 16 140 26.591 T 18-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 SHALO_2378 25aa6fdce1c629722841e2e7667c690b 142 Gene3D G3DSA:3.90.1180.10 5 142 4.1E-55 T 18-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 SHALO_2378 25aa6fdce1c629722841e2e7667c690b 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 7 137 4.5E-58 T 18-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_2378 25aa6fdce1c629722841e2e7667c690b 142 Pfam PF00572 Ribosomal protein L13 16 136 1.4E-51 T 18-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 SHALO_1819 563d2a43ab18fad93e597c04d11ead94 308 SUPERFAMILY SSF111337 1 307 9.94E-102 T 18-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 SHALO_1819 563d2a43ab18fad93e597c04d11ead94 308 Gene3D G3DSA:2.40.10.240 36 138 1.2E-92 T 18-10-2018 SHALO_1819 563d2a43ab18fad93e597c04d11ead94 308 Gene3D G3DSA:3.40.1780.10 1 307 1.2E-92 T 18-10-2018 SHALO_1819 563d2a43ab18fad93e597c04d11ead94 308 Pfam PF02547 Queuosine biosynthesis protein 1 307 4.5E-98 T 18-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 SHALO_1819 563d2a43ab18fad93e597c04d11ead94 308 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 308 3.3E-111 T 18-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 SHALO_2672 0ace5d42e6d9566c746b50e88f6b68da 340 Gene3D G3DSA:1.20.58.2180 158 333 1.7E-65 T 18-10-2018 SHALO_2672 0ace5d42e6d9566c746b50e88f6b68da 340 Pfam PF01497 Periplasmic binding protein 93 280 1.3E-16 T 18-10-2018 IPR002491 ABC transporter periplasmic binding domain SHALO_2672 0ace5d42e6d9566c746b50e88f6b68da 340 SUPERFAMILY SSF53807 23 337 3.1E-47 T 18-10-2018 SHALO_2672 0ace5d42e6d9566c746b50e88f6b68da 340 Gene3D G3DSA:3.40.50.1980 183 286 1.7E-65 T 18-10-2018 SHALO_2672 0ace5d42e6d9566c746b50e88f6b68da 340 Gene3D G3DSA:3.40.50.1980 17 153 1.0E-45 T 18-10-2018 SHALO_0311 40604122f795bf29d287b19711e8a29d 761 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 45 62 - T 18-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 SHALO_0311 40604122f795bf29d287b19711e8a29d 761 Gene3D G3DSA:2.40.40.20 631 761 5.6E-31 T 18-10-2018 SHALO_0311 40604122f795bf29d287b19711e8a29d 761 SMART SM00926 40 94 5.1E-7 T 18-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0311 40604122f795bf29d287b19711e8a29d 761 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 41 93 7.7E-9 T 18-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0311 40604122f795bf29d287b19711e8a29d 761 Pfam PF01568 Molydopterin dinucleotide binding domain 641 734 7.6E-16 T 18-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 SHALO_0311 40604122f795bf29d287b19711e8a29d 761 Gene3D G3DSA:3.40.50.740 98 546 2.2E-125 T 18-10-2018 SHALO_0311 40604122f795bf29d287b19711e8a29d 761 Gene3D G3DSA:3.40.228.10 180 371 2.2E-125 T 18-10-2018 SHALO_0311 40604122f795bf29d287b19711e8a29d 761 SUPERFAMILY SSF53706 39 618 2.75E-128 T 18-10-2018 SHALO_0311 40604122f795bf29d287b19711e8a29d 761 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 467 484 - T 18-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 SHALO_0311 40604122f795bf29d287b19711e8a29d 761 SUPERFAMILY SSF50692 602 750 1.33E-24 T 18-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily SHALO_0311 40604122f795bf29d287b19711e8a29d 761 Pfam PF00384 Molybdopterin oxidoreductase 97 525 8.3E-73 T 18-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0311 40604122f795bf29d287b19711e8a29d 761 Gene3D G3DSA:2.20.25.90 35 97 4.6E-13 T 18-10-2018 SHALO_1771 113dbd70ec48db708e1624eb05bb8621 676 Gene3D G3DSA:1.10.486.10 373 414 5.3E-24 T 18-10-2018 SHALO_1771 113dbd70ec48db708e1624eb05bb8621 676 Pfam PF13361 UvrD-like helicase C-terminal domain 271 654 3.1E-44 T 18-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 SHALO_1771 113dbd70ec48db708e1624eb05bb8621 676 Gene3D G3DSA:1.10.10.160 109 190 2.6E-59 T 18-10-2018 IPR013986 DExx box DNA helicase domain superfamily SHALO_1771 113dbd70ec48db708e1624eb05bb8621 676 SUPERFAMILY SSF52540 4 659 4.69E-109 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_1771 113dbd70ec48db708e1624eb05bb8621 676 Gene3D G3DSA:3.40.50.300 274 372 5.3E-24 T 18-10-2018 SHALO_1771 113dbd70ec48db708e1624eb05bb8621 676 Gene3D G3DSA:3.40.50.300 580 671 1.1E-31 T 18-10-2018 SHALO_1771 113dbd70ec48db708e1624eb05bb8621 676 Pfam PF13245 AAA domain 10 250 1.8E-28 T 18-10-2018 SHALO_1771 113dbd70ec48db708e1624eb05bb8621 676 Gene3D G3DSA:3.40.50.300 6 266 2.6E-59 T 18-10-2018 SHALO_1771 113dbd70ec48db708e1624eb05bb8621 676 Gene3D G3DSA:1.10.486.10 482 579 1.1E-31 T 18-10-2018 SHALO_1284 9ddcda544c3c15e9f3f817da774e301a 250 SMART SM00749 183 246 27.0 T 18-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria SHALO_1284 9ddcda544c3c15e9f3f817da774e301a 250 SMART SM00749 106 169 7.3E-4 T 18-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria SHALO_1284 9ddcda544c3c15e9f3f817da774e301a 250 SMART SM00749 31 94 24.0 T 18-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria SHALO_1284 9ddcda544c3c15e9f3f817da774e301a 250 Pfam PF04972 BON domain 101 167 2.0E-17 T 18-10-2018 IPR007055 BON domain SHALO_1284 9ddcda544c3c15e9f3f817da774e301a 250 Pfam PF04972 BON domain 178 244 7.2E-11 T 18-10-2018 IPR007055 BON domain SHALO_1284 9ddcda544c3c15e9f3f817da774e301a 250 Pfam PF04972 BON domain 27 93 1.5E-14 T 18-10-2018 IPR007055 BON domain SHALO_0668 43ce9bef94d83afb6bbeaa0c075df6c5 481 Gene3D G3DSA:3.20.20.60 3 336 6.3E-162 T 18-10-2018 SHALO_0668 43ce9bef94d83afb6bbeaa0c075df6c5 481 Pfam PF02887 Pyruvate kinase, alpha/beta domain 357 468 9.9E-27 T 18-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 SHALO_0668 43ce9bef94d83afb6bbeaa0c075df6c5 481 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 3 467 1.1E-146 T 18-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 SHALO_0668 43ce9bef94d83afb6bbeaa0c075df6c5 481 SUPERFAMILY SSF51621 2 343 2.41E-91 T 18-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 SHALO_0668 43ce9bef94d83afb6bbeaa0c075df6c5 481 PRINTS PR01050 Pyruvate kinase family signature 270 294 6.1E-59 T 18-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 SHALO_0668 43ce9bef94d83afb6bbeaa0c075df6c5 481 PRINTS PR01050 Pyruvate kinase family signature 314 330 6.1E-59 T 18-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 SHALO_0668 43ce9bef94d83afb6bbeaa0c075df6c5 481 PRINTS PR01050 Pyruvate kinase family signature 218 244 6.1E-59 T 18-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 SHALO_0668 43ce9bef94d83afb6bbeaa0c075df6c5 481 PRINTS PR01050 Pyruvate kinase family signature 60 76 6.1E-59 T 18-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 SHALO_0668 43ce9bef94d83afb6bbeaa0c075df6c5 481 PRINTS PR01050 Pyruvate kinase family signature 188 202 6.1E-59 T 18-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 SHALO_0668 43ce9bef94d83afb6bbeaa0c075df6c5 481 PRINTS PR01050 Pyruvate kinase family signature 245 269 6.1E-59 T 18-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 SHALO_0668 43ce9bef94d83afb6bbeaa0c075df6c5 481 PRINTS PR01050 Pyruvate kinase family signature 295 313 6.1E-59 T 18-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 SHALO_0668 43ce9bef94d83afb6bbeaa0c075df6c5 481 SUPERFAMILY SSF52935 326 468 8.11E-29 T 18-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 SHALO_0668 43ce9bef94d83afb6bbeaa0c075df6c5 481 Pfam PF00224 Pyruvate kinase, barrel domain 3 339 3.0E-121 T 18-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 SHALO_0668 43ce9bef94d83afb6bbeaa0c075df6c5 481 Gene3D G3DSA:2.40.33.10 71 170 6.3E-162 T 18-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 SHALO_0668 43ce9bef94d83afb6bbeaa0c075df6c5 481 Gene3D G3DSA:3.40.1380.20 337 466 6.3E-162 T 18-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 SHALO_0668 43ce9bef94d83afb6bbeaa0c075df6c5 481 SUPERFAMILY SSF50800 71 169 6.98E-20 T 18-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily SHALO_2683 4b5d7e187bfcaad45005b464006c651d 184 SUPERFAMILY SSF54862 1 181 3.52E-49 T 18-10-2018 SHALO_2683 4b5d7e187bfcaad45005b464006c651d 184 PRINTS PR00354 7Fe ferredoxin signature 83 100 2.3E-5 T 18-10-2018 IPR000813 7Fe ferredoxin GO:0009055 SHALO_2683 4b5d7e187bfcaad45005b464006c651d 184 PRINTS PR00354 7Fe ferredoxin signature 56 66 2.3E-5 T 18-10-2018 IPR000813 7Fe ferredoxin GO:0009055 SHALO_2683 4b5d7e187bfcaad45005b464006c651d 184 PRINTS PR00354 7Fe ferredoxin signature 66 76 2.3E-5 T 18-10-2018 IPR000813 7Fe ferredoxin GO:0009055 SHALO_2683 4b5d7e187bfcaad45005b464006c651d 184 Gene3D G3DSA:3.30.70.20 6 177 2.7E-35 T 18-10-2018 SHALO_2683 4b5d7e187bfcaad45005b464006c651d 184 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 88 99 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_2683 4b5d7e187bfcaad45005b464006c651d 184 Gene3D G3DSA:3.30.70.20 62 119 2.7E-35 T 18-10-2018 SHALO_2683 4b5d7e187bfcaad45005b464006c651d 184 Pfam PF13247 4Fe-4S dicluster domain 53 165 5.3E-11 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_1656 194913fe96593bfd5618b665c5809803 111 Gene3D G3DSA:3.10.450.50 4 109 1.4E-32 T 18-10-2018 SHALO_1656 194913fe96593bfd5618b665c5809803 111 SUPERFAMILY SSF54427 10 109 5.99E-11 T 18-10-2018 IPR032710 NTF2-like domain superfamily SHALO_2175 1e39f11658da9088627be22b86d23307 280 Pfam PF05552 Conserved TM helix 17 59 4.5E-8 T 18-10-2018 IPR008910 Conserved TM helix SHALO_2175 1e39f11658da9088627be22b86d23307 280 SUPERFAMILY SSF82861 23 107 1.96E-14 T 18-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 SHALO_2175 1e39f11658da9088627be22b86d23307 280 SUPERFAMILY SSF82689 174 271 1.83E-24 T 18-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 SHALO_2175 1e39f11658da9088627be22b86d23307 280 Pfam PF00924 Mechanosensitive ion channel 67 261 5.5E-40 T 18-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 SHALO_2175 1e39f11658da9088627be22b86d23307 280 SUPERFAMILY SSF50182 109 172 2.26E-16 T 18-10-2018 IPR010920 LSM domain superfamily SHALO_2175 1e39f11658da9088627be22b86d23307 280 Gene3D G3DSA:2.30.30.60 124 172 1.2E-13 T 18-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily SHALO_2175 1e39f11658da9088627be22b86d23307 280 Gene3D G3DSA:3.30.70.100 175 265 2.4E-20 T 18-10-2018 SHALO_2000 8f64ce5e64118e84c9911d69ab3372e1 323 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 116 280 1.5E-52 T 18-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SHALO_2000 8f64ce5e64118e84c9911d69ab3372e1 323 Gene3D G3DSA:1.20.1640.10 128 300 3.6E-10 T 18-10-2018 SHALO_2000 8f64ce5e64118e84c9911d69ab3372e1 323 SUPERFAMILY SSF82866 120 291 1.44E-36 T 18-10-2018 SHALO_2000 8f64ce5e64118e84c9911d69ab3372e1 323 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 38 283 1.4E-80 T 18-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 SHALO_2000 8f64ce5e64118e84c9911d69ab3372e1 323 PRINTS PR01755 Bacterial translocase SecF protein signature 151 165 1.4E-28 T 18-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SHALO_2000 8f64ce5e64118e84c9911d69ab3372e1 323 PRINTS PR01755 Bacterial translocase SecF protein signature 199 217 1.4E-28 T 18-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SHALO_2000 8f64ce5e64118e84c9911d69ab3372e1 323 PRINTS PR01755 Bacterial translocase SecF protein signature 231 246 1.4E-28 T 18-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SHALO_2000 8f64ce5e64118e84c9911d69ab3372e1 323 PRINTS PR01755 Bacterial translocase SecF protein signature 37 52 1.4E-28 T 18-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SHALO_2000 8f64ce5e64118e84c9911d69ab3372e1 323 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 10 294 25.643 T 18-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 SHALO_2000 8f64ce5e64118e84c9911d69ab3372e1 323 Pfam PF02355 Protein export membrane protein 109 290 5.3E-64 T 18-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial SHALO_2000 8f64ce5e64118e84c9911d69ab3372e1 323 Pfam PF07549 SecD/SecF GG Motif 32 59 1.4E-10 T 18-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site SHALO_2877 cc105f09e0a4174c92c520c766fd1851 823 Gene3D G3DSA:3.40.50.740 120 622 0.0 T 18-10-2018 SHALO_2877 cc105f09e0a4174c92c520c766fd1851 823 Gene3D G3DSA:3.40.228.10 202 678 0.0 T 18-10-2018 SHALO_2877 cc105f09e0a4174c92c520c766fd1851 823 Gene3D G3DSA:2.40.40.20 682 816 1.9E-50 T 18-10-2018 SHALO_2877 cc105f09e0a4174c92c520c766fd1851 823 SUPERFAMILY SSF50692 664 807 2.19E-35 T 18-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily SHALO_2877 cc105f09e0a4174c92c520c766fd1851 823 Pfam PF01568 Molydopterin dinucleotide binding domain 696 800 9.8E-24 T 18-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 SHALO_2877 cc105f09e0a4174c92c520c766fd1851 823 Gene3D G3DSA:3.30.200.200 12 658 0.0 T 18-10-2018 SHALO_2877 cc105f09e0a4174c92c520c766fd1851 823 SUPERFAMILY SSF53706 8 678 9.2E-127 T 18-10-2018 SHALO_2877 cc105f09e0a4174c92c520c766fd1851 823 Pfam PF00384 Molybdopterin oxidoreductase 119 576 1.3E-32 T 18-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_2877 cc105f09e0a4174c92c520c766fd1851 823 TIGRFAM TIGR02693 arsenite_ox_L: arsenite oxidase, large subunit 8 807 4.8E-298 T 18-10-2018 IPR014066 Arsenite oxidase, large subunit MetaCyc: PWY-7429 SHALO_0299 1fad6be789559781f4560d42d8406559 71 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 18-10-2018 IPR019844 Cold-shock conserved site SHALO_0299 1fad6be789559781f4560d42d8406559 71 SMART SM00357 5 71 9.5E-27 T 18-10-2018 IPR011129 Cold shock domain GO:0003676 SHALO_0299 1fad6be789559781f4560d42d8406559 71 Gene3D G3DSA:2.40.50.140 1 71 2.0E-28 T 18-10-2018 SHALO_0299 1fad6be789559781f4560d42d8406559 71 PIRSF PIRSF002599 1 71 7.1E-24 T 18-10-2018 IPR012156 Cold shock, CspA GO:0003676 SHALO_0299 1fad6be789559781f4560d42d8406559 71 SUPERFAMILY SSF50249 4 70 5.57E-24 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold SHALO_0299 1fad6be789559781f4560d42d8406559 71 PRINTS PR00050 Cold shock protein signature 44 62 6.7E-15 T 18-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SHALO_0299 1fad6be789559781f4560d42d8406559 71 PRINTS PR00050 Cold shock protein signature 27 36 6.7E-15 T 18-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SHALO_0299 1fad6be789559781f4560d42d8406559 71 PRINTS PR00050 Cold shock protein signature 6 21 6.7E-15 T 18-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SHALO_0299 1fad6be789559781f4560d42d8406559 71 Pfam PF00313 'Cold-shock' DNA-binding domain 5 70 2.6E-27 T 18-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SHALO_1498 5e5d3f2885335a6ab5e732282252af95 607 PRINTS PR00344 Bacterial sensor protein C-terminal signature 567 585 8.3E-9 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_1498 5e5d3f2885335a6ab5e732282252af95 607 PRINTS PR00344 Bacterial sensor protein C-terminal signature 554 564 8.3E-9 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_1498 5e5d3f2885335a6ab5e732282252af95 607 PRINTS PR00344 Bacterial sensor protein C-terminal signature 536 550 8.3E-9 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_1498 5e5d3f2885335a6ab5e732282252af95 607 PRINTS PR00344 Bacterial sensor protein C-terminal signature 591 604 8.3E-9 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_1498 5e5d3f2885335a6ab5e732282252af95 607 SUPERFAMILY SSF47384 387 458 1.61E-8 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SHALO_1498 5e5d3f2885335a6ab5e732282252af95 607 Gene3D G3DSA:1.10.287.130 379 460 3.0E-13 T 18-10-2018 SHALO_1498 5e5d3f2885335a6ab5e732282252af95 607 SUPERFAMILY SSF55874 461 603 2.23E-22 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_1498 5e5d3f2885335a6ab5e732282252af95 607 Pfam PF07695 7TM diverse intracellular signalling 170 345 1.2E-9 T 18-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 SHALO_1498 5e5d3f2885335a6ab5e732282252af95 607 SMART SM00387 501 607 9.4E-19 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_1498 5e5d3f2885335a6ab5e732282252af95 607 Gene3D G3DSA:3.30.565.10 463 605 1.2E-27 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_1498 5e5d3f2885335a6ab5e732282252af95 607 SMART SM00388 392 462 2.9E-4 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_1498 5e5d3f2885335a6ab5e732282252af95 607 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 504 603 2.8E-15 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_0409 e5bf4b4ec20bf7c6839460e46b46dca7 757 SUPERFAMILY SSF55874 580 750 1.26E-24 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_0409 e5bf4b4ec20bf7c6839460e46b46dca7 757 SUPERFAMILY SSF55874 39 218 5.35E-25 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_0409 e5bf4b4ec20bf7c6839460e46b46dca7 757 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 59 194 1.0E-23 T 18-10-2018 SHALO_0409 e5bf4b4ec20bf7c6839460e46b46dca7 757 SMART SM00387 627 749 1.7E-18 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_0409 e5bf4b4ec20bf7c6839460e46b46dca7 757 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 634 747 3.8E-13 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_0409 e5bf4b4ec20bf7c6839460e46b46dca7 757 Gene3D G3DSA:3.30.565.10 22 229 3.2E-31 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_0409 e5bf4b4ec20bf7c6839460e46b46dca7 757 PRINTS PR00344 Bacterial sensor protein C-terminal signature 708 726 1.2E-8 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_0409 e5bf4b4ec20bf7c6839460e46b46dca7 757 PRINTS PR00344 Bacterial sensor protein C-terminal signature 733 746 1.2E-8 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_0409 e5bf4b4ec20bf7c6839460e46b46dca7 757 PRINTS PR00344 Bacterial sensor protein C-terminal signature 667 681 1.2E-8 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_0409 e5bf4b4ec20bf7c6839460e46b46dca7 757 Gene3D G3DSA:3.30.565.10 574 747 6.3E-26 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_1303 b06f1d9ef7f25379a40f91c6f9db3b4f 187 Pfam PF02589 LUD domain 4 177 4.6E-21 T 18-10-2018 IPR003741 LUD domain SHALO_1303 b06f1d9ef7f25379a40f91c6f9db3b4f 187 Gene3D G3DSA:3.40.50.10420 1 177 4.2E-29 T 18-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily SHALO_1303 b06f1d9ef7f25379a40f91c6f9db3b4f 187 SUPERFAMILY SSF100950 15 178 4.18E-27 T 18-10-2018 IPR037171 NagB/RpiA transferase-like SHALO_1673 7463b4e635afe2a80b380a98f7324ba5 216 Gene3D G3DSA:1.20.1260.10 36 170 1.6E-40 T 18-10-2018 IPR012347 Ferritin-like SHALO_1673 7463b4e635afe2a80b380a98f7324ba5 216 SUPERFAMILY SSF47240 41 171 2.22E-31 T 18-10-2018 IPR009078 Ferritin-like superfamily SHALO_1673 7463b4e635afe2a80b380a98f7324ba5 216 Pfam PF02915 Rubrerythrin 44 163 1.2E-21 T 18-10-2018 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 SHALO_1673 7463b4e635afe2a80b380a98f7324ba5 216 Pfam PF06397 Desulfoferrodoxin, N-terminal domain 3 35 1.2E-11 T 18-10-2018 IPR004462 Desulforodoxin domain GO:0005506 SHALO_1673 7463b4e635afe2a80b380a98f7324ba5 216 SUPERFAMILY SSF57802 2 36 2.98E-10 T 18-10-2018 SHALO_1673 7463b4e635afe2a80b380a98f7324ba5 216 Gene3D G3DSA:2.20.28.10 172 213 5.9E-15 T 18-10-2018 SHALO_1673 7463b4e635afe2a80b380a98f7324ba5 216 SUPERFAMILY SSF57802 175 212 5.89E-11 T 18-10-2018 SHALO_1673 7463b4e635afe2a80b380a98f7324ba5 216 TIGRFAM TIGR00319 desulf_FeS4: desulfoferrodoxin FeS4 iron-binding domain 3 33 6.5E-11 T 18-10-2018 IPR004462 Desulforodoxin domain GO:0005506 SHALO_1673 7463b4e635afe2a80b380a98f7324ba5 216 Gene3D G3DSA:2.20.28.100 1 35 6.5E-12 T 18-10-2018 IPR038094 Desulforodoxin domain superfamily SHALO_2568 19b271bbb5d1afaedb95223517c3d3e2 465 SMART SM00387 362 465 1.3E-23 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_2568 19b271bbb5d1afaedb95223517c3d3e2 465 SMART SM00388 251 317 3.1E-10 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_2568 19b271bbb5d1afaedb95223517c3d3e2 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 409 9.1E-10 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_2568 19b271bbb5d1afaedb95223517c3d3e2 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 423 9.1E-10 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_2568 19b271bbb5d1afaedb95223517c3d3e2 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 429 447 9.1E-10 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_2568 19b271bbb5d1afaedb95223517c3d3e2 465 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 365 463 9.7E-20 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_2568 19b271bbb5d1afaedb95223517c3d3e2 465 SUPERFAMILY SSF55874 307 465 6.68E-34 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_2568 19b271bbb5d1afaedb95223517c3d3e2 465 Gene3D G3DSA:3.30.565.10 316 465 2.1E-33 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_2568 19b271bbb5d1afaedb95223517c3d3e2 465 SUPERFAMILY SSF47384 234 313 1.86E-13 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SHALO_2568 19b271bbb5d1afaedb95223517c3d3e2 465 Pfam PF00512 His Kinase A (phospho-acceptor) domain 253 314 1.4E-8 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_2568 19b271bbb5d1afaedb95223517c3d3e2 465 Gene3D G3DSA:1.10.287.130 202 315 1.8E-17 T 18-10-2018 SHALO_1612 2ee71846cf27106554c758f6569ee861 522 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 68 75 - T 18-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 SHALO_1612 2ee71846cf27106554c758f6569ee861 522 Gene3D G3DSA:3.40.50.1980 50 190 1.7E-143 T 18-10-2018 SHALO_1612 2ee71846cf27106554c758f6569ee861 522 TIGRFAM TIGR01862 N2-ase-Ialpha: nitrogenase component I, alpha chain 14 454 1.5E-202 T 18-10-2018 IPR010143 Nitrogenase component 1, alpha chain GO:0009399|GO:0016163|GO:0051536|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 SHALO_1612 2ee71846cf27106554c758f6569ee861 522 SUPERFAMILY SSF53807 5 453 1.78E-118 T 18-10-2018 SHALO_1612 2ee71846cf27106554c758f6569ee861 522 Gene3D G3DSA:3.40.50.1980 14 453 1.7E-143 T 18-10-2018 SHALO_1612 2ee71846cf27106554c758f6569ee861 522 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 49 446 1.7E-93 T 18-10-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 SHALO_1612 2ee71846cf27106554c758f6569ee861 522 TIGRFAM TIGR01861 ANFD: nitrogenase iron-iron protein, alpha chain 1 510 0.0 T 18-10-2018 IPR011290 Nitrogenase iron-iron protein, alpha chain GO:0009399|GO:0016163|GO:0051536|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 SHALO_1612 2ee71846cf27106554c758f6569ee861 522 ProSitePatterns PS00090 Nitrogenases component 1 alpha and beta subunits signature 2. 136 150 - T 18-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 SHALO_1612 2ee71846cf27106554c758f6569ee861 522 TIGRFAM TIGR01284 alt_nitrog_alph: nitrogenase alpha chain 4 459 3.9E-245 T 18-10-2018 IPR005974 Nitrogenase alpha chain GO:0009399|GO:0016163|GO:0051536|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 SHALO_1612 2ee71846cf27106554c758f6569ee861 522 Gene3D G3DSA:3.40.50.1980 191 325 1.7E-143 T 18-10-2018 SHALO_2577 6b7e42c381cde310e8b0bc181650ab22 440 SMART SM00283 99 315 6.1E-26 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_2577 6b7e42c381cde310e8b0bc181650ab22 440 SUPERFAMILY SSF58104 114 317 1.83E-49 T 18-10-2018 SHALO_2577 6b7e42c381cde310e8b0bc181650ab22 440 Pfam PF13682 Chemoreceptor zinc-binding domain 316 380 8.2E-14 T 18-10-2018 IPR025991 Chemoreceptor zinc-binding domain SHALO_2577 6b7e42c381cde310e8b0bc181650ab22 440 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 197 224 2.0E-21 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 SHALO_2577 6b7e42c381cde310e8b0bc181650ab22 440 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 226 255 2.0E-21 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 SHALO_2577 6b7e42c381cde310e8b0bc181650ab22 440 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 160 318 5.4E-37 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_2577 6b7e42c381cde310e8b0bc181650ab22 440 Gene3D G3DSA:1.10.287.950 37 326 3.0E-46 T 18-10-2018 SHALO_2199 73960b8a915ba2442fea5c5e90f04ddf 414 Gene3D G3DSA:1.10.287.40 1 105 1.1E-13 T 18-10-2018 SHALO_2199 73960b8a915ba2442fea5c5e90f04ddf 414 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 108 5.3E-22 T 18-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 SHALO_2199 73960b8a915ba2442fea5c5e90f04ddf 414 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 414 3.0E-165 T 18-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 SHALO_2199 73960b8a915ba2442fea5c5e90f04ddf 414 PRINTS PR00981 Seryl-tRNA synthetase signature 263 275 6.7E-29 T 18-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 SHALO_2199 73960b8a915ba2442fea5c5e90f04ddf 414 PRINTS PR00981 Seryl-tRNA synthetase signature 275 288 6.7E-29 T 18-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 SHALO_2199 73960b8a915ba2442fea5c5e90f04ddf 414 PRINTS PR00981 Seryl-tRNA synthetase signature 315 328 6.7E-29 T 18-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 SHALO_2199 73960b8a915ba2442fea5c5e90f04ddf 414 PRINTS PR00981 Seryl-tRNA synthetase signature 350 366 6.7E-29 T 18-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 SHALO_2199 73960b8a915ba2442fea5c5e90f04ddf 414 PRINTS PR00981 Seryl-tRNA synthetase signature 332 348 6.7E-29 T 18-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 SHALO_2199 73960b8a915ba2442fea5c5e90f04ddf 414 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 221 397 1.0E-35 T 18-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_2199 73960b8a915ba2442fea5c5e90f04ddf 414 SUPERFAMILY SSF46589 1 113 2.82E-20 T 18-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 SHALO_2199 73960b8a915ba2442fea5c5e90f04ddf 414 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 414 38.035 T 18-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 SHALO_2199 73960b8a915ba2442fea5c5e90f04ddf 414 SUPERFAMILY SSF55681 117 414 3.94E-92 T 18-10-2018 SHALO_2199 73960b8a915ba2442fea5c5e90f04ddf 414 Gene3D G3DSA:3.30.930.10 106 414 2.0E-116 T 18-10-2018 SHALO_2199 73960b8a915ba2442fea5c5e90f04ddf 414 PIRSF PIRSF001529 1 414 7.6E-163 T 18-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 SHALO_2812 1620423883738e298162658eb6bde94c 278 SUPERFAMILY SSF103473 4 242 1.7E-5 T 18-10-2018 IPR036259 MFS transporter superfamily SHALO_2812 1620423883738e298162658eb6bde94c 278 Pfam PF03824 High-affinity nickel-transport protein 16 268 1.6E-39 T 18-10-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 SHALO_1452 3d9e854a65e433a2551036e526c8c9fb 478 Pfam PF08245 Mur ligase middle domain 162 336 2.8E-23 T 18-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 SHALO_1452 3d9e854a65e433a2551036e526c8c9fb 478 Gene3D G3DSA:3.90.190.20 355 472 1.9E-10 T 18-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 SHALO_1452 3d9e854a65e433a2551036e526c8c9fb 478 SUPERFAMILY SSF53244 356 470 4.12E-18 T 18-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 SHALO_1452 3d9e854a65e433a2551036e526c8c9fb 478 Gene3D G3DSA:3.40.1190.10 142 354 4.1E-38 T 18-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 SHALO_1452 3d9e854a65e433a2551036e526c8c9fb 478 SUPERFAMILY SSF53623 156 355 1.96E-32 T 18-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 SHALO_2267 bd7ef9cef34841ab976b7933e2805d5d 225 Gene3D G3DSA:1.10.10.10 136 225 8.3E-14 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_2267 bd7ef9cef34841ab976b7933e2805d5d 225 Pfam PF00072 Response regulator receiver domain 13 122 8.8E-26 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_2267 bd7ef9cef34841ab976b7933e2805d5d 225 SMART SM00862 153 223 1.9E-9 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_2267 bd7ef9cef34841ab976b7933e2805d5d 225 SUPERFAMILY SSF52172 9 179 9.25E-36 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_2267 bd7ef9cef34841ab976b7933e2805d5d 225 SMART SM00448 11 122 2.6E-29 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_2267 bd7ef9cef34841ab976b7933e2805d5d 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 223 2.1E-9 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_2267 bd7ef9cef34841ab976b7933e2805d5d 225 Gene3D G3DSA:3.40.50.2300 8 135 2.3E-32 T 18-10-2018 SHALO_0287 a4b17f81eb8d0ea7e11053e863ab2ec8 456 Gene3D G3DSA:2.70.70.10 287 437 5.4E-32 T 18-10-2018 IPR011055 Duplicated hybrid motif SHALO_0287 a4b17f81eb8d0ea7e11053e863ab2ec8 456 Pfam PF01551 Peptidase family M23 336 430 6.5E-23 T 18-10-2018 IPR016047 Peptidase M23 SHALO_0287 a4b17f81eb8d0ea7e11053e863ab2ec8 456 SUPERFAMILY SSF51261 175 434 1.44E-49 T 18-10-2018 IPR011055 Duplicated hybrid motif SHALO_0584 55250f4031a75d9a20c610cc67044435 323 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 14 188 7.2E-49 T 18-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SHALO_0584 55250f4031a75d9a20c610cc67044435 323 SUPERFAMILY SSF52402 9 209 1.5E-45 T 18-10-2018 SHALO_0584 55250f4031a75d9a20c610cc67044435 323 Gene3D G3DSA:3.40.50.620 6 215 7.9E-49 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_0584 55250f4031a75d9a20c610cc67044435 323 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 2 268 19.476 T 18-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SHALO_0584 55250f4031a75d9a20c610cc67044435 323 Pfam PF01171 PP-loop family 14 186 3.6E-53 T 18-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 SHALO_1503 c17a8fb7b115893170e55835162e85bd 223 SMART SM00448 5 116 4.9E-28 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_1503 c17a8fb7b115893170e55835162e85bd 223 Pfam PF00072 Response regulator receiver domain 7 116 2.8E-25 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_1503 c17a8fb7b115893170e55835162e85bd 223 Gene3D G3DSA:1.10.10.10 131 221 2.8E-16 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_1503 c17a8fb7b115893170e55835162e85bd 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 219 3.0E-10 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_1503 c17a8fb7b115893170e55835162e85bd 223 Gene3D G3DSA:3.40.50.2300 2 130 5.8E-32 T 18-10-2018 SHALO_1503 c17a8fb7b115893170e55835162e85bd 223 SUPERFAMILY SSF52172 3 175 9.68E-35 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_1503 c17a8fb7b115893170e55835162e85bd 223 SMART SM00862 150 219 3.6E-11 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_2261 b5a92436d80944e58ad002c445dfef29 309 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 26 286 4.1E-81 T 18-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B SHALO_2261 b5a92436d80944e58ad002c445dfef29 309 SUPERFAMILY SSF50891 191 293 4.17E-5 T 18-10-2018 IPR029000 Cyclophilin-like domain superfamily SHALO_2261 b5a92436d80944e58ad002c445dfef29 309 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 10 299 5.4E-81 T 18-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B SHALO_2261 b5a92436d80944e58ad002c445dfef29 309 SMART SM00797 25 304 4.0E-113 T 18-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B SHALO_2261 b5a92436d80944e58ad002c445dfef29 309 Gene3D G3DSA:2.40.100.10 177 308 8.1E-40 T 18-10-2018 IPR029000 Cyclophilin-like domain superfamily SHALO_1068 727ece23f00811dcb30c0b40e7c81c9b 128 Pfam PF02627 Carboxymuconolactone decarboxylase family 33 118 1.0E-20 T 18-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 SHALO_1068 727ece23f00811dcb30c0b40e7c81c9b 128 SUPERFAMILY SSF69118 4 120 1.25E-33 T 18-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 SHALO_1068 727ece23f00811dcb30c0b40e7c81c9b 128 Gene3D G3DSA:1.20.1290.10 2 124 1.2E-39 T 18-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 SHALO_1558 dd95c4eb7ea0f49872a0be7473c09fef 698 SUPERFAMILY SSF52540 316 605 7.55E-46 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_1558 dd95c4eb7ea0f49872a0be7473c09fef 698 SMART SM00843 635 698 4.4E-27 T 18-10-2018 IPR018541 FtsK gamma domain SHALO_1558 dd95c4eb7ea0f49872a0be7473c09fef 698 Pfam PF09397 Ftsk gamma domain 637 697 2.9E-24 T 18-10-2018 IPR018541 FtsK gamma domain SHALO_1558 dd95c4eb7ea0f49872a0be7473c09fef 698 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 12 127 2.8E-10 T 18-10-2018 IPR025199 DNA translocase FtsK, 4TM region SHALO_1558 dd95c4eb7ea0f49872a0be7473c09fef 698 SUPERFAMILY SSF46785 635 697 8.3E-18 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SHALO_1558 dd95c4eb7ea0f49872a0be7473c09fef 698 Gene3D G3DSA:3.40.50.300 340 618 2.8E-105 T 18-10-2018 SHALO_1558 dd95c4eb7ea0f49872a0be7473c09fef 698 Gene3D G3DSA:3.30.980.40 235 339 1.6E-34 T 18-10-2018 SHALO_1558 dd95c4eb7ea0f49872a0be7473c09fef 698 Gene3D G3DSA:1.10.10.10 631 696 3.7E-23 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_1558 dd95c4eb7ea0f49872a0be7473c09fef 698 Pfam PF01580 FtsK/SpoIIIE family 483 533 1.0E-14 T 18-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 SHALO_1558 dd95c4eb7ea0f49872a0be7473c09fef 698 Pfam PF01580 FtsK/SpoIIIE family 343 479 9.8E-48 T 18-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 SHALO_1558 dd95c4eb7ea0f49872a0be7473c09fef 698 SMART SM00382 378 554 0.0016 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_1694 ab15cd7be3a7bd57d481f42cce2227ab 358 PIRSF PIRSF001359 15 358 1.8E-90 T 18-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 SHALO_1694 ab15cd7be3a7bd57d481f42cce2227ab 358 Pfam PF01116 Fructose-bisphosphate aldolase class-II 20 356 6.1E-87 T 18-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 SHALO_1694 ab15cd7be3a7bd57d481f42cce2227ab 358 SUPERFAMILY SSF51569 6 357 4.1E-125 T 18-10-2018 SHALO_1694 ab15cd7be3a7bd57d481f42cce2227ab 358 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 100 111 - T 18-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 SHALO_1694 ab15cd7be3a7bd57d481f42cce2227ab 358 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 6 357 1.2E-164 T 18-10-2018 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 SHALO_1694 ab15cd7be3a7bd57d481f42cce2227ab 358 Gene3D G3DSA:3.20.20.70 2 358 4.3E-138 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_1694 ab15cd7be3a7bd57d481f42cce2227ab 358 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 16 357 3.4E-106 T 18-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 SHALO_1694 ab15cd7be3a7bd57d481f42cce2227ab 358 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 171 182 - T 18-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 SHALO_0597 38067261cf5d2caab00a20f7b16dfdbe 74 SUPERFAMILY SSF46689 4 63 6.09E-21 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SHALO_0597 38067261cf5d2caab00a20f7b16dfdbe 74 Pfam PF04255 Protein of unknown function (DUF433) 5 60 1.0E-23 T 18-10-2018 IPR007367 Protein of unknown function DUF433 SHALO_0597 38067261cf5d2caab00a20f7b16dfdbe 74 Gene3D G3DSA:1.10.10.10 5 70 6.8E-19 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_1932 e7f2fc3e16f6c9de63f77ed7da97140b 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 221 1.7E-23 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_1932 e7f2fc3e16f6c9de63f77ed7da97140b 223 SMART SM00448 3 115 1.4E-32 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_1932 e7f2fc3e16f6c9de63f77ed7da97140b 223 Gene3D G3DSA:3.40.50.2300 1 123 4.1E-30 T 18-10-2018 SHALO_1932 e7f2fc3e16f6c9de63f77ed7da97140b 223 Pfam PF00072 Response regulator receiver domain 5 115 2.6E-23 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_1932 e7f2fc3e16f6c9de63f77ed7da97140b 223 SUPERFAMILY SSF52172 3 127 2.56E-33 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_1932 e7f2fc3e16f6c9de63f77ed7da97140b 223 SMART SM00862 145 221 5.9E-24 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_1932 e7f2fc3e16f6c9de63f77ed7da97140b 223 Gene3D G3DSA:1.10.10.10 124 223 1.9E-34 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_1932 e7f2fc3e16f6c9de63f77ed7da97140b 223 SUPERFAMILY SSF46894 124 222 1.59E-28 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHALO_1992 926e2de7a2f6236d006dfe15a4166933 268 TIGRFAM TIGR00282 TIGR00282: metallophosphoesterase, MG_246/BB_0505 family 1 258 1.4E-78 T 18-10-2018 IPR005235 Metallophosphoesterase, YmdB-like SHALO_1992 926e2de7a2f6236d006dfe15a4166933 268 Gene3D G3DSA:3.60.21.10 1 268 2.7E-93 T 18-10-2018 IPR029052 Metallo-dependent phosphatase-like SHALO_1992 926e2de7a2f6236d006dfe15a4166933 268 SUPERFAMILY SSF56300 1 243 4.74E-71 T 18-10-2018 SHALO_1992 926e2de7a2f6236d006dfe15a4166933 268 Pfam PF13277 YmdB-like protein 5 246 2.6E-90 T 18-10-2018 IPR005235 Metallophosphoesterase, YmdB-like SHALO_1992 926e2de7a2f6236d006dfe15a4166933 268 PIRSF PIRSF004789 1 262 4.5E-93 T 18-10-2018 IPR005235 Metallophosphoesterase, YmdB-like SHALO_2602 301f7b51482375d8439e76753fd7d723 476 Pfam PF10415 Fumarase C C-terminus 408 460 1.8E-20 T 18-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 SHALO_2602 301f7b51482375d8439e76753fd7d723 476 Gene3D G3DSA:1.10.40.30 408 459 2.0E-20 T 18-10-2018 SHALO_2602 301f7b51482375d8439e76753fd7d723 476 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 4 463 1.8E-228 T 18-10-2018 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 SHALO_2602 301f7b51482375d8439e76753fd7d723 476 PRINTS PR00145 Argininosuccinate lyase family signature 134 156 1.7E-6 T 18-10-2018 SHALO_2602 301f7b51482375d8439e76753fd7d723 476 PRINTS PR00145 Argininosuccinate lyase family signature 317 333 1.7E-6 T 18-10-2018 SHALO_2602 301f7b51482375d8439e76753fd7d723 476 PRINTS PR00145 Argininosuccinate lyase family signature 175 195 1.7E-6 T 18-10-2018 SHALO_2602 301f7b51482375d8439e76753fd7d723 476 Gene3D G3DSA:1.10.275.10 1 139 9.9E-55 T 18-10-2018 IPR024083 Fumarase/histidase, N-terminal SHALO_2602 301f7b51482375d8439e76753fd7d723 476 SUPERFAMILY SSF48557 3 460 1.15E-144 T 18-10-2018 IPR008948 L-Aspartase-like GO:0003824 SHALO_2602 301f7b51482375d8439e76753fd7d723 476 PRINTS PR00149 Fumarate lyase superfamily signature 135 153 3.5E-29 T 18-10-2018 IPR000362 Fumarate lyase family SHALO_2602 301f7b51482375d8439e76753fd7d723 476 PRINTS PR00149 Fumarate lyase superfamily signature 271 298 3.5E-29 T 18-10-2018 IPR000362 Fumarate lyase family SHALO_2602 301f7b51482375d8439e76753fd7d723 476 PRINTS PR00149 Fumarate lyase superfamily signature 180 198 3.5E-29 T 18-10-2018 IPR000362 Fumarate lyase family SHALO_2602 301f7b51482375d8439e76753fd7d723 476 PRINTS PR00149 Fumarate lyase superfamily signature 317 333 3.5E-29 T 18-10-2018 IPR000362 Fumarate lyase family SHALO_2602 301f7b51482375d8439e76753fd7d723 476 ProSitePatterns PS00163 Fumarate lyases signature. 317 326 - T 18-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 SHALO_2602 301f7b51482375d8439e76753fd7d723 476 Pfam PF00206 Lyase 17 342 1.4E-98 T 18-10-2018 IPR022761 Fumarate lyase, N-terminal SHALO_2602 301f7b51482375d8439e76753fd7d723 476 Gene3D G3DSA:1.20.200.10 140 407 1.9E-112 T 18-10-2018 SHALO_2500 b2ffecae140a4cc1ba7e94bb065a6cf5 551 Pfam PF01145 SPFH domain / Band 7 family 34 183 4.2E-20 T 18-10-2018 IPR001107 Band 7 domain SHALO_2500 b2ffecae140a4cc1ba7e94bb065a6cf5 551 Pfam PF15975 Flotillin 401 525 1.4E-34 T 18-10-2018 IPR031905 Flotillin, C-terminal domain Reactome: R-HSA-8849932 SHALO_2500 b2ffecae140a4cc1ba7e94bb065a6cf5 551 Gene3D G3DSA:3.30.479.30 65 184 8.8E-25 T 18-10-2018 SHALO_2500 b2ffecae140a4cc1ba7e94bb065a6cf5 551 SMART SM00244 25 194 1.4E-8 T 18-10-2018 IPR001107 Band 7 domain SHALO_2500 b2ffecae140a4cc1ba7e94bb065a6cf5 551 SUPERFAMILY SSF117892 56 184 5.23E-21 T 18-10-2018 IPR036013 Band 7/SPFH domain superfamily SHALO_1522 0312c93e74ef7cb842f4e1724093fef1 192 Gene3D G3DSA:3.40.50.150 1 192 2.3E-61 T 18-10-2018 SHALO_1522 0312c93e74ef7cb842f4e1724093fef1 192 Pfam PF13847 Methyltransferase domain 32 107 5.2E-8 T 18-10-2018 IPR025714 Methyltransferase domain SHALO_1522 0312c93e74ef7cb842f4e1724093fef1 192 SUPERFAMILY SSF53335 17 163 1.84E-24 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_1522 0312c93e74ef7cb842f4e1724093fef1 192 TIGRFAM TIGR02469 CbiT: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 15 135 1.2E-34 T 18-10-2018 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit GO:0008276|GO:0009236 KEGG: 00860+2.1.1.196|MetaCyc: PWY-7377 SHALO_2772 00e414de873813666bd8ca13a0cc25d6 73 SUPERFAMILY SSF54285 3 73 1.83E-9 T 18-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp SHALO_2772 00e414de873813666bd8ca13a0cc25d6 73 Pfam PF02597 ThiS family 20 73 2.4E-8 T 18-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 SHALO_2772 00e414de873813666bd8ca13a0cc25d6 73 Gene3D G3DSA:3.10.20.30 1 73 1.8E-19 T 18-10-2018 IPR012675 Beta-grasp domain superfamily SHALO_0612 c82f08937b6508ee3815665711c76c00 327 Pfam PF13533 Biotin-lipoyl like 17 55 1.1E-6 T 18-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain SHALO_0612 c82f08937b6508ee3815665711c76c00 327 Gene3D G3DSA:2.40.50.100 15 68 5.9E-6 T 18-10-2018 SHALO_0612 c82f08937b6508ee3815665711c76c00 327 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 19 39 9.5E-6 T 18-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SHALO_0612 c82f08937b6508ee3815665711c76c00 327 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 236 260 9.5E-6 T 18-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SHALO_0612 c82f08937b6508ee3815665711c76c00 327 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 204 225 9.5E-6 T 18-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SHALO_0612 c82f08937b6508ee3815665711c76c00 327 Pfam PF13437 HlyD family secretion protein 192 311 1.6E-15 T 18-10-2018 SHALO_0612 c82f08937b6508ee3815665711c76c00 327 Gene3D G3DSA:2.40.30.170 206 326 4.3E-32 T 18-10-2018 SHALO_0612 c82f08937b6508ee3815665711c76c00 327 SUPERFAMILY SSF111369 82 244 6.02E-12 T 18-10-2018 SHALO_0612 c82f08937b6508ee3815665711c76c00 327 Gene3D G3DSA:1.10.287.470 70 159 1.7E-8 T 18-10-2018 SHALO_0027 7556542de8e9bc902aab0da87233f8ea 528 SUPERFAMILY SSF116726 262 342 2.75E-7 T 18-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 SHALO_0027 7556542de8e9bc902aab0da87233f8ea 528 Pfam PF06826 Predicted Permease Membrane Region 356 524 1.4E-36 T 18-10-2018 IPR006512 YidE/YbjL duplication SHALO_0027 7556542de8e9bc902aab0da87233f8ea 528 Pfam PF06826 Predicted Permease Membrane Region 9 161 2.9E-32 T 18-10-2018 IPR006512 YidE/YbjL duplication SHALO_0027 7556542de8e9bc902aab0da87233f8ea 528 Gene3D G3DSA:3.30.70.1450 265 341 2.6E-5 T 18-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 SHALO_0027 7556542de8e9bc902aab0da87233f8ea 528 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 361 512 1.5E-32 T 18-10-2018 IPR006512 YidE/YbjL duplication SHALO_2043 e94140591badbd6c1caa2db352f21602 245 SUPERFAMILY SSF75708 54 243 2.35E-28 T 18-10-2018 SHALO_2477 7f60ebcfc4365f10def933ce36281745 302 SUPERFAMILY SSF46626 193 301 6.03E-27 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_2477 7f60ebcfc4365f10def933ce36281745 302 SUPERFAMILY SSF46626 76 187 3.53E-13 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_2477 7f60ebcfc4365f10def933ce36281745 302 Gene3D G3DSA:1.10.760.10 100 182 1.8E-55 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_2477 7f60ebcfc4365f10def933ce36281745 302 TIGRFAM TIGR04484 thiosulf_SoxA: sulfur oxidation c-type cytochrome SoxA 98 302 5.6E-66 T 18-10-2018 IPR025710 SoxAX cytochrome complex subunit A GO:0009055|GO:0016491|GO:0019417|GO:0020037|GO:0070069 SHALO_2477 7f60ebcfc4365f10def933ce36281745 302 PIRSF PIRSF038455 1 302 6.0E-79 T 18-10-2018 IPR025710 SoxAX cytochrome complex subunit A GO:0009055|GO:0016491|GO:0019417|GO:0020037|GO:0070069 SHALO_2477 7f60ebcfc4365f10def933ce36281745 302 Gene3D G3DSA:1.10.760.10 86 301 1.8E-55 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_1445 b302240081c2675ef3c44e32734bb036 469 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 2 457 16.844 T 18-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ SHALO_1445 b302240081c2675ef3c44e32734bb036 469 PIRSF PIRSF002869 1 467 3.7E-118 T 18-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ SHALO_1445 b302240081c2675ef3c44e32734bb036 469 Pfam PF03023 MviN-like protein 28 463 1.2E-103 T 18-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ SHALO_1445 b302240081c2675ef3c44e32734bb036 469 PRINTS PR01806 Virulence factor MviN signature 124 148 1.9E-53 T 18-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ SHALO_1445 b302240081c2675ef3c44e32734bb036 469 PRINTS PR01806 Virulence factor MviN signature 32 51 1.9E-53 T 18-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ SHALO_1445 b302240081c2675ef3c44e32734bb036 469 PRINTS PR01806 Virulence factor MviN signature 148 169 1.9E-53 T 18-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ SHALO_1445 b302240081c2675ef3c44e32734bb036 469 PRINTS PR01806 Virulence factor MviN signature 51 67 1.9E-53 T 18-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ SHALO_1445 b302240081c2675ef3c44e32734bb036 469 PRINTS PR01806 Virulence factor MviN signature 358 377 1.9E-53 T 18-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ SHALO_1445 b302240081c2675ef3c44e32734bb036 469 PRINTS PR01806 Virulence factor MviN signature 260 286 1.9E-53 T 18-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ SHALO_1445 b302240081c2675ef3c44e32734bb036 469 PRINTS PR01806 Virulence factor MviN signature 410 427 1.9E-53 T 18-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ SHALO_1445 b302240081c2675ef3c44e32734bb036 469 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 2 449 4.7E-109 T 18-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ SHALO_2404 038e8122ba6dd738040d6779aa61c262 105 Gene3D G3DSA:3.30.1310.10 3 101 7.4E-33 T 18-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily SHALO_2404 038e8122ba6dd738040d6779aa61c262 105 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 5 99 1.2E-21 T 18-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family SHALO_2404 038e8122ba6dd738040d6779aa61c262 105 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 97 16.699 T 18-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family SHALO_2404 038e8122ba6dd738040d6779aa61c262 105 PIRSF PIRSF004555 3 105 4.3E-24 T 18-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family SHALO_2404 038e8122ba6dd738040d6779aa61c262 105 Pfam PF02575 YbaB/EbfC DNA-binding family 14 98 9.5E-21 T 18-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family SHALO_2404 038e8122ba6dd738040d6779aa61c262 105 SUPERFAMILY SSF82607 9 97 6.15E-20 T 18-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily SHALO_2847 d30864decb3576b4fcb876754d710b27 520 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 64 249 2.7E-7 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 SHALO_2847 d30864decb3576b4fcb876754d710b27 520 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 334 511 2.5E-10 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 SHALO_2847 d30864decb3576b4fcb876754d710b27 520 SUPERFAMILY SSF161098 4 249 9.59E-30 T 18-10-2018 IPR035906 MetI-like superfamily SHALO_2847 d30864decb3576b4fcb876754d710b27 520 SUPERFAMILY SSF161098 279 512 2.62E-28 T 18-10-2018 IPR035906 MetI-like superfamily SHALO_2847 d30864decb3576b4fcb876754d710b27 520 Gene3D G3DSA:1.10.3720.10 3 256 1.2E-34 T 18-10-2018 IPR035906 MetI-like superfamily SHALO_2847 d30864decb3576b4fcb876754d710b27 520 Gene3D G3DSA:1.10.3720.10 276 520 2.3E-23 T 18-10-2018 IPR035906 MetI-like superfamily SHALO_2047 326ac59c44c170522e2c494d075b24b8 231 SUPERFAMILY SSF52540 21 221 8.43E-45 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_2047 326ac59c44c170522e2c494d075b24b8 231 Gene3D G3DSA:3.40.50.300 6 230 2.6E-54 T 18-10-2018 SHALO_2047 326ac59c44c170522e2c494d075b24b8 231 Pfam PF00005 ABC transporter 21 147 2.6E-19 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_2047 326ac59c44c170522e2c494d075b24b8 231 ProSitePatterns PS00211 ABC transporters family signature. 120 134 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_2047 326ac59c44c170522e2c494d075b24b8 231 SMART SM00382 24 213 2.9E-10 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_2465 5c438747c06cfc363effd73ee5c4a219 276 Gene3D G3DSA:1.10.155.10 1 74 8.6E-20 T 18-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily SHALO_2465 5c438747c06cfc363effd73ee5c4a219 276 PRINTS PR00996 Glutamate methyltransferase family signature 31 44 2.4E-40 T 18-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SHALO_2465 5c438747c06cfc363effd73ee5c4a219 276 PRINTS PR00996 Glutamate methyltransferase family signature 235 258 2.4E-40 T 18-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SHALO_2465 5c438747c06cfc363effd73ee5c4a219 276 PRINTS PR00996 Glutamate methyltransferase family signature 107 127 2.4E-40 T 18-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SHALO_2465 5c438747c06cfc363effd73ee5c4a219 276 PRINTS PR00996 Glutamate methyltransferase family signature 142 158 2.4E-40 T 18-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SHALO_2465 5c438747c06cfc363effd73ee5c4a219 276 PRINTS PR00996 Glutamate methyltransferase family signature 70 82 2.4E-40 T 18-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SHALO_2465 5c438747c06cfc363effd73ee5c4a219 276 PRINTS PR00996 Glutamate methyltransferase family signature 216 230 2.4E-40 T 18-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SHALO_2465 5c438747c06cfc363effd73ee5c4a219 276 SUPERFAMILY SSF53335 77 270 1.94E-45 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_2465 5c438747c06cfc363effd73ee5c4a219 276 SMART SM00138 9 276 8.7E-87 T 18-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SHALO_2465 5c438747c06cfc363effd73ee5c4a219 276 PIRSF PIRSF000410 1 276 2.4E-92 T 18-10-2018 IPR026024 Chemotaxis protein methyltransferase CheR SHALO_2465 5c438747c06cfc363effd73ee5c4a219 276 SUPERFAMILY SSF47757 5 76 8.76E-16 T 18-10-2018 SHALO_2465 5c438747c06cfc363effd73ee5c4a219 276 Gene3D G3DSA:3.40.50.150 76 276 1.4E-62 T 18-10-2018 SHALO_2465 5c438747c06cfc363effd73ee5c4a219 276 Pfam PF01739 CheR methyltransferase, SAM binding domain 77 270 9.0E-58 T 18-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal SHALO_2465 5c438747c06cfc363effd73ee5c4a219 276 Pfam PF03705 CheR methyltransferase, all-alpha domain 10 62 2.4E-16 T 18-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal SHALO_1561 2271a1fc0d7abb3bea9ad68c1b2e7d0b 793 Gene3D G3DSA:3.30.1490.20 1 193 1.2E-72 T 18-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 SHALO_1561 2271a1fc0d7abb3bea9ad68c1b2e7d0b 793 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 4 789 0.0 T 18-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 SHALO_1561 2271a1fc0d7abb3bea9ad68c1b2e7d0b 793 Gene3D G3DSA:3.50.30.10 358 476 6.3E-37 T 18-10-2018 SHALO_1561 2271a1fc0d7abb3bea9ad68c1b2e7d0b 793 Gene3D G3DSA:3.20.20.60 477 788 2.1E-99 T 18-10-2018 SHALO_1561 2271a1fc0d7abb3bea9ad68c1b2e7d0b 793 Pfam PF00391 PEP-utilising enzyme, mobile domain 383 454 2.1E-24 T 18-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SHALO_1561 2271a1fc0d7abb3bea9ad68c1b2e7d0b 793 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 16 345 2.6E-116 T 18-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 SHALO_1561 2271a1fc0d7abb3bea9ad68c1b2e7d0b 793 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 711 726 1.2E-5 T 18-10-2018 SHALO_1561 2271a1fc0d7abb3bea9ad68c1b2e7d0b 793 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 747 759 1.2E-5 T 18-10-2018 SHALO_1561 2271a1fc0d7abb3bea9ad68c1b2e7d0b 793 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 694 709 1.2E-5 T 18-10-2018 SHALO_1561 2271a1fc0d7abb3bea9ad68c1b2e7d0b 793 Gene3D G3DSA:3.30.470.20 194 354 9.6E-55 T 18-10-2018 SHALO_1561 2271a1fc0d7abb3bea9ad68c1b2e7d0b 793 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 476 787 1.1E-62 T 18-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 SHALO_1561 2271a1fc0d7abb3bea9ad68c1b2e7d0b 793 SUPERFAMILY SSF51621 460 791 1.23E-94 T 18-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 SHALO_1561 2271a1fc0d7abb3bea9ad68c1b2e7d0b 793 SUPERFAMILY SSF56059 1 380 5.3E-102 T 18-10-2018 SHALO_1561 2271a1fc0d7abb3bea9ad68c1b2e7d0b 793 SUPERFAMILY SSF52009 350 463 3.14E-30 T 18-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 SHALO_1561 2271a1fc0d7abb3bea9ad68c1b2e7d0b 793 PIRSF PIRSF000854 1 793 0.0 T 18-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 SHALO_2252 35e44290b4fe30e52d84fdbc21fd44bc 807 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 279 782 7.9E-79 T 18-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 SHALO_2252 35e44290b4fe30e52d84fdbc21fd44bc 807 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 246 799 2.7E-150 T 18-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 SHALO_2252 35e44290b4fe30e52d84fdbc21fd44bc 807 SUPERFAMILY SSF81653 310 406 5.89E-17 T 18-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 SHALO_2252 35e44290b4fe30e52d84fdbc21fd44bc 807 Gene3D G3DSA:3.40.50.1000 488 749 1.2E-68 T 18-10-2018 IPR023214 HAD superfamily SHALO_2252 35e44290b4fe30e52d84fdbc21fd44bc 807 Pfam PF00403 Heavy-metal-associated domain 96 154 4.9E-12 T 18-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SHALO_2252 35e44290b4fe30e52d84fdbc21fd44bc 807 SUPERFAMILY SSF56784 505 798 4.71E-48 T 18-10-2018 IPR036412 HAD-like superfamily SHALO_2252 35e44290b4fe30e52d84fdbc21fd44bc 807 Gene3D G3DSA:3.30.70.100 91 176 4.9E-14 T 18-10-2018 SHALO_2252 35e44290b4fe30e52d84fdbc21fd44bc 807 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 228 801 3.2E-142 T 18-10-2018 SHALO_2252 35e44290b4fe30e52d84fdbc21fd44bc 807 SUPERFAMILY SSF81665 276 782 1.83E-14 T 18-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 SHALO_2252 35e44290b4fe30e52d84fdbc21fd44bc 807 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 698 717 2.2E-18 T 18-10-2018 SHALO_2252 35e44290b4fe30e52d84fdbc21fd44bc 807 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 721 733 2.2E-18 T 18-10-2018 SHALO_2252 35e44290b4fe30e52d84fdbc21fd44bc 807 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 645 655 2.2E-18 T 18-10-2018 SHALO_2252 35e44290b4fe30e52d84fdbc21fd44bc 807 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 357 371 2.2E-18 T 18-10-2018 SHALO_2252 35e44290b4fe30e52d84fdbc21fd44bc 807 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 507 521 2.2E-18 T 18-10-2018 SHALO_2252 35e44290b4fe30e52d84fdbc21fd44bc 807 Gene3D G3DSA:2.70.150.20 294 411 3.2E-23 T 18-10-2018 SHALO_2252 35e44290b4fe30e52d84fdbc21fd44bc 807 SUPERFAMILY SSF55008 88 162 8.64E-19 T 18-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 SHALO_2252 35e44290b4fe30e52d84fdbc21fd44bc 807 PRINTS PR00943 Copper-transporting ATPase signature 732 746 2.9E-5 T 18-10-2018 SHALO_2252 35e44290b4fe30e52d84fdbc21fd44bc 807 PRINTS PR00943 Copper-transporting ATPase signature 490 505 2.9E-5 T 18-10-2018 SHALO_2252 35e44290b4fe30e52d84fdbc21fd44bc 807 PRINTS PR00943 Copper-transporting ATPase signature 675 692 2.9E-5 T 18-10-2018 SHALO_2252 35e44290b4fe30e52d84fdbc21fd44bc 807 PRINTS PR00943 Copper-transporting ATPase signature 277 296 2.9E-5 T 18-10-2018 SHALO_2252 35e44290b4fe30e52d84fdbc21fd44bc 807 PRINTS PR00943 Copper-transporting ATPase signature 136 156 2.9E-5 T 18-10-2018 SHALO_2252 35e44290b4fe30e52d84fdbc21fd44bc 807 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 5 86 2.5E-18 T 18-10-2018 IPR021993 Putative metal-binding domain of cation transport ATPase SHALO_2252 35e44290b4fe30e52d84fdbc21fd44bc 807 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 509 515 - T 18-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 SHALO_2252 35e44290b4fe30e52d84fdbc21fd44bc 807 Pfam PF00702 haloacid dehalogenase-like hydrolase 504 710 1.1E-29 T 18-10-2018 SHALO_2252 35e44290b4fe30e52d84fdbc21fd44bc 807 Pfam PF00122 E1-E2 ATPase 309 487 1.6E-44 T 18-10-2018 SHALO_2252 35e44290b4fe30e52d84fdbc21fd44bc 807 Gene3D G3DSA:3.40.1110.10 518 630 1.2E-68 T 18-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 SHALO_1100 54d100c050d148c50e5eb0c34666a2e3 142 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 4 141 4.3E-55 T 18-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 SHALO_1100 54d100c050d148c50e5eb0c34666a2e3 142 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 2 141 5.0E-57 T 18-10-2018 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 SHALO_1100 54d100c050d148c50e5eb0c34666a2e3 142 Gene3D G3DSA:3.40.1400.10 1 142 3.5E-56 T 18-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 SHALO_1100 54d100c050d148c50e5eb0c34666a2e3 142 PIRSF PIRSF005384 1 142 1.5E-53 T 18-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 SHALO_1100 54d100c050d148c50e5eb0c34666a2e3 142 SUPERFAMILY SSF89623 2 140 8.5E-54 T 18-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 SHALO_1100 54d100c050d148c50e5eb0c34666a2e3 142 Pfam PF02502 Ribose/Galactose Isomerase 4 140 1.6E-52 T 18-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 SHALO_2547 aa63ebe8ff7f8fd427cf93ead689b3f3 271 SUPERFAMILY SSF161098 73 258 6.15E-35 T 18-10-2018 IPR035906 MetI-like superfamily SHALO_2547 aa63ebe8ff7f8fd427cf93ead689b3f3 271 Gene3D G3DSA:1.10.3720.10 70 270 3.1E-28 T 18-10-2018 IPR035906 MetI-like superfamily SHALO_2547 aa63ebe8ff7f8fd427cf93ead689b3f3 271 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 259 2.6E-11 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 SHALO_2547 aa63ebe8ff7f8fd427cf93ead689b3f3 271 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 24 270 2.3E-86 T 18-10-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 SHALO_1213 6575257a04b0018b783e1d9ec5996b33 110 Pfam PF03206 Nitrogen fixation protein NifW 3 78 3.2E-16 T 18-10-2018 IPR004893 Nitrogen fixation protein NifW GO:0009399 SHALO_1562 02b490380e131fde7b0c91ed27707995 404 Pfam PF07690 Major Facilitator Superfamily 18 270 1.4E-18 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SHALO_1562 02b490380e131fde7b0c91ed27707995 404 Pfam PF07690 Major Facilitator Superfamily 274 400 1.2E-8 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SHALO_1562 02b490380e131fde7b0c91ed27707995 404 Gene3D G3DSA:1.20.1250.20 8 398 2.4E-36 T 18-10-2018 SHALO_1562 02b490380e131fde7b0c91ed27707995 404 SUPERFAMILY SSF103473 11 400 1.7E-40 T 18-10-2018 IPR036259 MFS transporter superfamily SHALO_1988 05504d95e09d5a839873e9849167438c 213 Gene3D G3DSA:3.20.20.70 1 213 3.1E-78 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_1988 05504d95e09d5a839873e9849167438c 213 Pfam PF00834 Ribulose-phosphate 3 epimerase family 3 199 1.4E-81 T 18-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 SHALO_1988 05504d95e09d5a839873e9849167438c 213 PIRSF PIRSF001461 1 213 1.1E-90 T 18-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 SHALO_1988 05504d95e09d5a839873e9849167438c 213 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 30 44 - T 18-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 SHALO_1988 05504d95e09d5a839873e9849167438c 213 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 2 212 5.1E-89 T 18-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 SHALO_1988 05504d95e09d5a839873e9849167438c 213 SUPERFAMILY SSF51366 1 212 2.51E-64 T 18-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 SHALO_0844 332789eb02b2a459678444e436d0c7fa 408 SMART SM00060 26 105 16.0 T 18-10-2018 IPR003961 Fibronectin type III GO:0005515 SHALO_0844 332789eb02b2a459678444e436d0c7fa 408 SMART SM00060 224 302 12.0 T 18-10-2018 IPR003961 Fibronectin type III GO:0005515 SHALO_0844 332789eb02b2a459678444e436d0c7fa 408 SMART SM00060 314 394 2.9 T 18-10-2018 IPR003961 Fibronectin type III GO:0005515 SHALO_0844 332789eb02b2a459678444e436d0c7fa 408 SMART SM00060 128 210 26.0 T 18-10-2018 IPR003961 Fibronectin type III GO:0005515 SHALO_0844 332789eb02b2a459678444e436d0c7fa 408 Gene3D G3DSA:2.60.40.10 226 316 2.8E-17 T 18-10-2018 IPR013783 Immunoglobulin-like fold SHALO_0844 332789eb02b2a459678444e436d0c7fa 408 SUPERFAMILY SSF49265 140 301 2.79E-12 T 18-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 SHALO_0844 332789eb02b2a459678444e436d0c7fa 408 SUPERFAMILY SSF49265 37 115 2.01E-6 T 18-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 SHALO_0844 332789eb02b2a459678444e436d0c7fa 408 Gene3D G3DSA:2.60.40.10 127 225 1.3E-6 T 18-10-2018 IPR013783 Immunoglobulin-like fold SHALO_0844 332789eb02b2a459678444e436d0c7fa 408 SUPERFAMILY SSF49265 326 406 9.35E-7 T 18-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 SHALO_0844 332789eb02b2a459678444e436d0c7fa 408 Gene3D G3DSA:2.60.40.10 31 122 1.6E-8 T 18-10-2018 IPR013783 Immunoglobulin-like fold SHALO_0844 332789eb02b2a459678444e436d0c7fa 408 Gene3D G3DSA:2.60.40.10 317 408 9.0E-7 T 18-10-2018 IPR013783 Immunoglobulin-like fold SHALO_1377 ca29459c8fcd9aef9680f34b1d551c93 476 SUPERFAMILY SSF89095 297 400 3.79E-28 T 18-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 SHALO_1377 ca29459c8fcd9aef9680f34b1d551c93 476 Gene3D G3DSA:1.10.10.410 414 476 8.7E-25 T 18-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal SHALO_1377 ca29459c8fcd9aef9680f34b1d551c93 476 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 2 475 38.045 T 18-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 SHALO_1377 ca29459c8fcd9aef9680f34b1d551c93 476 Pfam PF02934 GatB/GatE catalytic domain 5 289 4.9E-114 T 18-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 SHALO_1377 ca29459c8fcd9aef9680f34b1d551c93 476 Gene3D G3DSA:1.10.150.380 297 413 3.6E-29 T 18-10-2018 SHALO_1377 ca29459c8fcd9aef9680f34b1d551c93 476 SMART SM00845 328 474 2.1E-67 T 18-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 SHALO_1377 ca29459c8fcd9aef9680f34b1d551c93 476 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 142 156 - T 18-10-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 SHALO_1377 ca29459c8fcd9aef9680f34b1d551c93 476 Pfam PF02637 GatB domain 328 474 3.1E-45 T 18-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 SHALO_1377 ca29459c8fcd9aef9680f34b1d551c93 476 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 1 474 4.0E-185 T 18-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 SHALO_1377 ca29459c8fcd9aef9680f34b1d551c93 476 SUPERFAMILY SSF55931 4 292 1.18E-120 T 18-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 SHALO_1325 97007f4ccdd3806c3829f1323e1caa02 267 SUPERFAMILY SSF53613 1 259 5.46E-88 T 18-10-2018 IPR029056 Ribokinase-like SHALO_1325 97007f4ccdd3806c3829f1323e1caa02 267 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 5 256 5.5E-108 T 18-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 SHALO_1325 97007f4ccdd3806c3829f1323e1caa02 267 Pfam PF08543 Phosphomethylpyrimidine kinase 11 254 5.4E-103 T 18-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 SHALO_1325 97007f4ccdd3806c3829f1323e1caa02 267 Gene3D G3DSA:3.40.1190.20 1 265 2.5E-109 T 18-10-2018 IPR029056 Ribokinase-like SHALO_2674 be926e368a60bc17fc6b255142bef356 255 Pfam PF13649 Methyltransferase domain 46 128 6.8E-15 T 18-10-2018 SHALO_2674 be926e368a60bc17fc6b255142bef356 255 Gene3D G3DSA:3.40.50.150 6 154 3.2E-24 T 18-10-2018 SHALO_2674 be926e368a60bc17fc6b255142bef356 255 SUPERFAMILY SSF53335 6 117 2.41E-27 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_1029 08caa552adbc18856e1e1c61e4b0c341 200 Gene3D G3DSA:1.10.3290.10 20 200 7.5E-36 T 18-10-2018 IPR036597 Fido-like domain superfamily SHALO_1029 08caa552adbc18856e1e1c61e4b0c341 200 SUPERFAMILY SSF140931 55 197 2.09E-30 T 18-10-2018 IPR036597 Fido-like domain superfamily SHALO_1029 08caa552adbc18856e1e1c61e4b0c341 200 TIGRFAM TIGR02613 mob_myst_B: mobile mystery protein B 31 194 2.1E-48 T 18-10-2018 IPR013436 Mobile mystery protein B SHALO_1029 08caa552adbc18856e1e1c61e4b0c341 200 Pfam PF02661 Fic/DOC family 59 152 5.2E-17 T 18-10-2018 IPR003812 Fido domain SHALO_2958 d9d9970e8199dbce8ba7f08dbbdbb4ef 204 SMART SM00419 156 204 8.1E-7 T 18-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SHALO_2958 d9d9970e8199dbce8ba7f08dbbdbb4ef 204 Gene3D G3DSA:1.10.10.10 144 204 1.2E-12 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_2958 d9d9970e8199dbce8ba7f08dbbdbb4ef 204 Gene3D G3DSA:2.60.120.10 4 142 1.9E-27 T 18-10-2018 IPR014710 RmlC-like jelly roll fold SHALO_2958 d9d9970e8199dbce8ba7f08dbbdbb4ef 204 Pfam PF13545 Crp-like helix-turn-helix domain 151 204 8.2E-10 T 18-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SHALO_2958 d9d9970e8199dbce8ba7f08dbbdbb4ef 204 SUPERFAMILY SSF51206 4 144 1.2E-19 T 18-10-2018 IPR018490 Cyclic nucleotide-binding-like SHALO_2958 d9d9970e8199dbce8ba7f08dbbdbb4ef 204 SUPERFAMILY SSF46785 148 204 2.97E-10 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SHALO_0776 afdeca64e04842846b70144aedec1cf3 267 Pfam PF00145 C-5 cytosine-specific DNA methylase 6 103 1.6E-11 T 18-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 SHALO_0776 afdeca64e04842846b70144aedec1cf3 267 Gene3D G3DSA:3.40.50.150 3 165 2.3E-17 T 18-10-2018 SHALO_0776 afdeca64e04842846b70144aedec1cf3 267 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 50 62 - T 18-10-2018 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-4655427|Reactome: R-HSA-5334118 SHALO_0776 afdeca64e04842846b70144aedec1cf3 267 SUPERFAMILY SSF53335 4 212 7.6E-27 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_1311 2a16b20b96cd011a94e188d15f68aa82 545 PIRSF PIRSF000171 1 533 1.4E-39 T 18-10-2018 SHALO_1311 2a16b20b96cd011a94e188d15f68aa82 545 Pfam PF00890 FAD binding domain 4 367 1.1E-86 T 18-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_1311 2a16b20b96cd011a94e188d15f68aa82 545 Gene3D G3DSA:3.50.50.60 4 378 2.6E-127 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SHALO_1311 2a16b20b96cd011a94e188d15f68aa82 545 Pfam PF02910 Fumarate reductase flavoprotein C-term 424 507 1.7E-22 T 18-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_1311 2a16b20b96cd011a94e188d15f68aa82 545 Gene3D G3DSA:1.20.58.100 395 507 1.2E-26 T 18-10-2018 SHALO_1311 2a16b20b96cd011a94e188d15f68aa82 545 SUPERFAMILY SSF51905 2 401 4.92E-59 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SHALO_1311 2a16b20b96cd011a94e188d15f68aa82 545 Gene3D G3DSA:3.90.700.10 234 323 2.6E-127 T 18-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_1311 2a16b20b96cd011a94e188d15f68aa82 545 SUPERFAMILY SSF46977 415 536 7.46E-29 T 18-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_1311 2a16b20b96cd011a94e188d15f68aa82 545 SUPERFAMILY SSF56425 224 328 6.28E-36 T 18-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_2845 2eb12af27eab5111c9b267155a8c5388 393 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 295 392 9.1E-16 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_2845 2eb12af27eab5111c9b267155a8c5388 393 SUPERFAMILY SSF47384 179 245 8.83E-7 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SHALO_2845 2eb12af27eab5111c9b267155a8c5388 393 SMART SM00388 191 251 0.0031 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_2845 2eb12af27eab5111c9b267155a8c5388 393 SUPERFAMILY SSF55874 255 393 3.67E-25 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_2845 2eb12af27eab5111c9b267155a8c5388 393 Gene3D G3DSA:3.30.565.10 245 393 1.2E-27 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_2845 2eb12af27eab5111c9b267155a8c5388 393 Gene3D G3DSA:1.10.287.130 143 244 2.8E-6 T 18-10-2018 SHALO_2845 2eb12af27eab5111c9b267155a8c5388 393 SMART SM00387 293 393 1.3E-12 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_2845 2eb12af27eab5111c9b267155a8c5388 393 PRINTS PR00344 Bacterial sensor protein C-terminal signature 326 340 2.2E-7 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_2845 2eb12af27eab5111c9b267155a8c5388 393 PRINTS PR00344 Bacterial sensor protein C-terminal signature 357 375 2.2E-7 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_2845 2eb12af27eab5111c9b267155a8c5388 393 PRINTS PR00344 Bacterial sensor protein C-terminal signature 381 393 2.2E-7 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_2845 2eb12af27eab5111c9b267155a8c5388 393 Pfam PF00512 His Kinase A (phospho-acceptor) domain 193 242 6.6E-7 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_0280 7d8a60e4e09056531a08e14d286500ca 223 Gene3D G3DSA:3.40.50.2300 1 121 1.7E-34 T 18-10-2018 SHALO_0280 7d8a60e4e09056531a08e14d286500ca 223 SMART SM00862 142 217 1.9E-20 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_0280 7d8a60e4e09056531a08e14d286500ca 223 Gene3D G3DSA:1.10.10.10 122 223 9.3E-31 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_0280 7d8a60e4e09056531a08e14d286500ca 223 Pfam PF00072 Response regulator receiver domain 3 113 1.9E-24 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_0280 7d8a60e4e09056531a08e14d286500ca 223 SMART SM00448 1 112 1.6E-31 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_0280 7d8a60e4e09056531a08e14d286500ca 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 142 217 2.3E-20 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_0280 7d8a60e4e09056531a08e14d286500ca 223 SUPERFAMILY SSF52172 1 172 3.95E-34 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_1034 379c9b303368a2a1ceab9638dcdf0651 533 SUPERFAMILY SSF58104 223 532 6.15E-54 T 18-10-2018 SHALO_1034 379c9b303368a2a1ceab9638dcdf0651 533 SMART SM00283 256 531 1.0E-36 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_1034 379c9b303368a2a1ceab9638dcdf0651 533 Gene3D G3DSA:1.10.287.950 202 533 8.1E-53 T 18-10-2018 SHALO_1034 379c9b303368a2a1ceab9638dcdf0651 533 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 350 476 3.6E-34 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_1557 de634d1be5dcbbc78e4a98139b35c174 804 Pfam PF00700 Bacterial flagellin C-terminal helical region 722 803 6.7E-6 T 18-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SHALO_1557 de634d1be5dcbbc78e4a98139b35c174 804 Gene3D G3DSA:1.20.1330.10 45 248 2.0E-30 T 18-10-2018 SHALO_1557 de634d1be5dcbbc78e4a98139b35c174 804 Pfam PF00669 Bacterial flagellin N-terminal helical region 7 142 2.4E-17 T 18-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SHALO_1557 de634d1be5dcbbc78e4a98139b35c174 804 SUPERFAMILY SSF64518 5 804 1.57E-42 T 18-10-2018 SHALO_1557 de634d1be5dcbbc78e4a98139b35c174 804 Gene3D G3DSA:1.20.1330.10 654 780 9.5E-7 T 18-10-2018 SHALO_2673 01f3105730b1e1c442b6afe29c17db97 593 Pfam PF04055 Radical SAM superfamily 64 218 1.8E-13 T 18-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 SHALO_2673 01f3105730b1e1c442b6afe29c17db97 593 Gene3D G3DSA:3.20.20.70 60 321 5.0E-24 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_2673 01f3105730b1e1c442b6afe29c17db97 593 SUPERFAMILY SSF53807 375 573 2.39E-30 T 18-10-2018 SHALO_2673 01f3105730b1e1c442b6afe29c17db97 593 SUPERFAMILY SSF102114 38 259 2.94E-24 T 18-10-2018 SHALO_2673 01f3105730b1e1c442b6afe29c17db97 593 Pfam PF01497 Periplasmic binding protein 383 494 5.8E-7 T 18-10-2018 IPR002491 ABC transporter periplasmic binding domain SHALO_2673 01f3105730b1e1c442b6afe29c17db97 593 Gene3D G3DSA:3.40.50.1980 353 585 3.9E-33 T 18-10-2018 SHALO_2441 888addca741952fee0066348fbaa79ff 639 Pfam PF03239 Iron permease FTR1 family 292 506 5.6E-26 T 18-10-2018 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0016020|GO:0033573|GO:0034755 SHALO_2670 19b3ebc08154c88fc7110bff59ef5f63 190 SUPERFAMILY SSF46458 54 167 2.23E-18 T 18-10-2018 IPR009050 Globin-like superfamily SHALO_2670 19b3ebc08154c88fc7110bff59ef5f63 190 Gene3D G3DSA:1.10.490.10 44 189 1.2E-41 T 18-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 SHALO_2670 19b3ebc08154c88fc7110bff59ef5f63 190 Pfam PF01152 Bacterial-like globin 55 164 1.9E-17 T 18-10-2018 IPR001486 Truncated hemoglobin GO:0019825 SHALO_0209 62bf8785cd4dd0e0d0df3997b8ec20c5 270 Gene3D G3DSA:3.40.1010.10 1 115 7.3E-33 T 18-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 SHALO_0209 62bf8785cd4dd0e0d0df3997b8ec20c5 270 SUPERFAMILY SSF53790 2 223 4.84E-62 T 18-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 SHALO_0209 62bf8785cd4dd0e0d0df3997b8ec20c5 270 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 2 267 2.1E-75 T 18-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 SHALO_0209 62bf8785cd4dd0e0d0df3997b8ec20c5 270 Gene3D G3DSA:3.30.950.10 116 228 7.2E-31 T 18-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 SHALO_0209 62bf8785cd4dd0e0d0df3997b8ec20c5 270 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 2 204 1.1E-24 T 18-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 SHALO_0209 62bf8785cd4dd0e0d0df3997b8ec20c5 270 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 85 96 - T 18-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 SHALO_0209 62bf8785cd4dd0e0d0df3997b8ec20c5 270 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 1 225 31.045 T 18-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 SHALO_0209 62bf8785cd4dd0e0d0df3997b8ec20c5 270 PIRSF PIRSF005917 1 270 1.3E-76 T 18-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 SHALO_2366 2ecf0b6fcf2d52c9cb3bd09b4555eb0f 274 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 27 274 2.8E-123 T 18-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 SHALO_2366 2ecf0b6fcf2d52c9cb3bd09b4555eb0f 274 Pfam PF00005 ABC transporter 42 199 2.1E-31 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_2366 2ecf0b6fcf2d52c9cb3bd09b4555eb0f 274 SMART SM00382 51 261 5.9E-14 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_2366 2ecf0b6fcf2d52c9cb3bd09b4555eb0f 274 Gene3D G3DSA:3.40.50.300 22 270 4.7E-65 T 18-10-2018 SHALO_2366 2ecf0b6fcf2d52c9cb3bd09b4555eb0f 274 ProSitePatterns PS00211 ABC transporters family signature. 171 185 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_2366 2ecf0b6fcf2d52c9cb3bd09b4555eb0f 274 SUPERFAMILY SSF52540 26 260 4.53E-60 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_2046 721d29d752a3ecb642dacb8b5718f806 641 Gene3D G3DSA:1.10.3810.10 42 240 1.2E-70 T 18-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 SHALO_2046 721d29d752a3ecb642dacb8b5718f806 641 Pfam PF00905 Penicillin binding protein transpeptidase domain 318 587 6.1E-37 T 18-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 SHALO_2046 721d29d752a3ecb642dacb8b5718f806 641 Gene3D G3DSA:3.40.710.10 244 636 1.1E-110 T 18-10-2018 SHALO_2046 721d29d752a3ecb642dacb8b5718f806 641 Pfam PF00912 Transglycosylase 50 224 4.0E-59 T 18-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 SHALO_2046 721d29d752a3ecb642dacb8b5718f806 641 SUPERFAMILY SSF53955 36 245 4.78E-71 T 18-10-2018 IPR023346 Lysozyme-like domain superfamily SHALO_2046 721d29d752a3ecb642dacb8b5718f806 641 SUPERFAMILY SSF56601 206 620 2.82E-110 T 18-10-2018 IPR012338 Beta-lactamase/transpeptidase-like SHALO_2046 721d29d752a3ecb642dacb8b5718f806 641 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 61 591 2.9E-181 T 18-10-2018 SHALO_2201 1367519befb84550864c49e0796f3c51 519 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 13 29 - T 18-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 SHALO_2201 1367519befb84550864c49e0796f3c51 519 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 501 3.9E-25 T 18-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 SHALO_2201 1367519befb84550864c49e0796f3c51 519 Pfam PF00682 HMGL-like 5 273 1.7E-100 T 18-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 SHALO_2201 1367519befb84550864c49e0796f3c51 519 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 5 499 2.7E-211 T 18-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 SHALO_2201 1367519befb84550864c49e0796f3c51 519 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 3 511 42.307 T 18-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 SHALO_2201 1367519befb84550864c49e0796f3c51 519 Gene3D G3DSA:3.20.20.70 2 277 3.4E-106 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_2201 1367519befb84550864c49e0796f3c51 519 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 198 211 - T 18-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 SHALO_2201 1367519befb84550864c49e0796f3c51 519 SMART SM00917 369 502 1.6E-29 T 18-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 SHALO_2201 1367519befb84550864c49e0796f3c51 519 SUPERFAMILY SSF51569 3 291 5.13E-97 T 18-10-2018 SHALO_2201 1367519befb84550864c49e0796f3c51 519 Gene3D G3DSA:1.10.238.260 282 392 1.5E-38 T 18-10-2018 SHALO_2201 1367519befb84550864c49e0796f3c51 519 SUPERFAMILY SSF110921 401 500 2.75E-19 T 18-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 SHALO_2201 1367519befb84550864c49e0796f3c51 519 Gene3D G3DSA:3.30.160.270 393 502 1.4E-9 T 18-10-2018 SHALO_0251 18fc345de2ae0a6861716936054fc625 332 TIGRFAM TIGR00876 tal_mycobact: transaldolase 7 330 5.4E-84 T 18-10-2018 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 SHALO_0251 18fc345de2ae0a6861716936054fc625 332 SUPERFAMILY SSF51569 6 331 6.72E-63 T 18-10-2018 SHALO_0251 18fc345de2ae0a6861716936054fc625 332 Gene3D G3DSA:3.20.20.70 4 332 2.8E-94 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_0251 18fc345de2ae0a6861716936054fc625 332 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 10 330 2.4E-78 T 18-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 SHALO_0251 18fc345de2ae0a6861716936054fc625 332 PIRSF PIRSF036915 3 332 2.7E-67 T 18-10-2018 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 SHALO_0251 18fc345de2ae0a6861716936054fc625 332 Hamap MF_00493 Transaldolase [tal]. 1 332 83.441 T 18-10-2018 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 SHALO_0238 bf0517d8b23c4a24ef6246eaf1ad413a 75 Pfam PF14384 BrnA antitoxin of type II toxin-antitoxin system 18 71 6.4E-10 T 18-10-2018 IPR025528 BrnA antitoxin of type II toxin-antitoxin system SHALO_0476 76d103a6513c666460c42454f72a2c55 234 PIRSF PIRSF002155 1 228 5.1E-80 T 18-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_0476 76d103a6513c666460c42454f72a2c55 234 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 3 230 42.77 T 18-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 SHALO_0476 76d103a6513c666460c42454f72a2c55 234 Pfam PF00687 Ribosomal protein L1p/L10e family 32 221 3.0E-57 T 18-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein SHALO_0476 76d103a6513c666460c42454f72a2c55 234 Gene3D G3DSA:3.40.50.790 69 160 9.4E-83 T 18-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich SHALO_0476 76d103a6513c666460c42454f72a2c55 234 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 140 - T 18-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_0476 76d103a6513c666460c42454f72a2c55 234 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 4 229 2.5E-103 T 18-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 SHALO_0476 76d103a6513c666460c42454f72a2c55 234 SUPERFAMILY SSF56808 7 225 4.71E-82 T 18-10-2018 IPR023674 Ribosomal protein L1-like SHALO_0476 76d103a6513c666460c42454f72a2c55 234 Gene3D G3DSA:3.30.190.20 22 225 9.4E-83 T 18-10-2018 SHALO_1506 36aefcb98186cfd07f7fac6eab63e196 305 Pfam PF12801 4Fe-4S binding domain 71 96 5.2E-5 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_1506 36aefcb98186cfd07f7fac6eab63e196 305 Pfam PF12801 4Fe-4S binding domain 188 216 15.0 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_1506 36aefcb98186cfd07f7fac6eab63e196 305 Pfam PF12801 4Fe-4S binding domain 52 58 580.0 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_1506 36aefcb98186cfd07f7fac6eab63e196 305 Pfam PF12801 4Fe-4S binding domain 154 165 170.0 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_1506 36aefcb98186cfd07f7fac6eab63e196 305 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 257 268 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_1506 36aefcb98186cfd07f7fac6eab63e196 305 Gene3D G3DSA:3.30.70.20 249 305 9.2E-6 T 18-10-2018 SHALO_1506 36aefcb98186cfd07f7fac6eab63e196 305 Pfam PF00037 4Fe-4S binding domain 228 244 1.2E-4 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_1506 36aefcb98186cfd07f7fac6eab63e196 305 Pfam PF00037 4Fe-4S binding domain 253 272 1.5E-5 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_1506 36aefcb98186cfd07f7fac6eab63e196 305 SUPERFAMILY SSF54862 82 288 1.17E-15 T 18-10-2018 SHALO_1506 36aefcb98186cfd07f7fac6eab63e196 305 Gene3D G3DSA:3.30.70.20 204 248 6.4E-6 T 18-10-2018 SHALO_0383 c4aaa4955162930ff3ea0ea368a71a98 287 SUPERFAMILY SSF103039 49 123 1.96E-10 T 18-10-2018 IPR028976 CheC-like superfamily SHALO_0383 c4aaa4955162930ff3ea0ea368a71a98 287 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 207 276 4.1E-20 T 18-10-2018 IPR001543 Surface presentation of antigen (SpoA) SHALO_0383 c4aaa4955162930ff3ea0ea368a71a98 287 SUPERFAMILY SSF101801 204 285 1.7E-20 T 18-10-2018 IPR036429 SpoA-like superfamily SHALO_0383 c4aaa4955162930ff3ea0ea368a71a98 287 PRINTS PR00956 Flagellar motor switch protein FliN signature 240 253 7.5E-18 T 18-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 SHALO_0383 c4aaa4955162930ff3ea0ea368a71a98 287 PRINTS PR00956 Flagellar motor switch protein FliN signature 224 240 7.5E-18 T 18-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 SHALO_0383 c4aaa4955162930ff3ea0ea368a71a98 287 PRINTS PR00956 Flagellar motor switch protein FliN signature 253 268 7.5E-18 T 18-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 SHALO_0383 c4aaa4955162930ff3ea0ea368a71a98 287 PRINTS PR00956 Flagellar motor switch protein FliN signature 207 223 7.5E-18 T 18-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 SHALO_0383 c4aaa4955162930ff3ea0ea368a71a98 287 Gene3D G3DSA:3.40.1550.10 7 162 2.8E-8 T 18-10-2018 IPR028976 CheC-like superfamily SHALO_0383 c4aaa4955162930ff3ea0ea368a71a98 287 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 204 279 6.1E-26 T 18-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 SHALO_0383 c4aaa4955162930ff3ea0ea368a71a98 287 Gene3D G3DSA:2.30.330.10 198 287 1.7E-26 T 18-10-2018 IPR036429 SpoA-like superfamily SHALO_1033 4ee5e4ad0967763565b5333e4ad38f24 440 SUPERFAMILY SSF55073 28 179 2.9E-29 T 18-10-2018 IPR029787 Nucleotide cyclase SHALO_1033 4ee5e4ad0967763565b5333e4ad38f24 440 Pfam PF00563 EAL domain 194 434 7.1E-67 T 18-10-2018 IPR001633 EAL domain SHALO_1033 4ee5e4ad0967763565b5333e4ad38f24 440 Gene3D G3DSA:3.30.70.270 16 192 1.7E-33 T 18-10-2018 SHALO_1033 4ee5e4ad0967763565b5333e4ad38f24 440 SUPERFAMILY SSF141868 194 437 2.48E-81 T 18-10-2018 IPR035919 EAL domain superfamily SHALO_1033 4ee5e4ad0967763565b5333e4ad38f24 440 Gene3D G3DSA:3.20.20.450 193 440 1.4E-89 T 18-10-2018 IPR035919 EAL domain superfamily SHALO_1033 4ee5e4ad0967763565b5333e4ad38f24 440 SMART SM00052 188 439 1.2E-99 T 18-10-2018 IPR001633 EAL domain SHALO_1033 4ee5e4ad0967763565b5333e4ad38f24 440 Pfam PF00990 Diguanylate cyclase, GGDEF domain 27 174 2.1E-25 T 18-10-2018 IPR000160 GGDEF domain SHALO_1033 4ee5e4ad0967763565b5333e4ad38f24 440 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 27 176 3.6E-22 T 18-10-2018 IPR000160 GGDEF domain SHALO_1033 4ee5e4ad0967763565b5333e4ad38f24 440 SMART SM00267 10 178 2.5E-9 T 18-10-2018 IPR000160 GGDEF domain SHALO_1443 666bf0afe7ebf45df4eee822e5313411 571 Gene3D G3DSA:1.20.1560.10 3 323 8.3E-85 T 18-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 SHALO_1443 666bf0afe7ebf45df4eee822e5313411 571 SUPERFAMILY SSF52540 332 570 2.44E-80 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_1443 666bf0afe7ebf45df4eee822e5313411 571 Pfam PF00005 ABC transporter 352 500 1.6E-32 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_1443 666bf0afe7ebf45df4eee822e5313411 571 Pfam PF00664 ABC transporter transmembrane region 23 292 6.6E-47 T 18-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 SHALO_1443 666bf0afe7ebf45df4eee822e5313411 571 SUPERFAMILY SSF90123 10 325 4.19E-77 T 18-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 SHALO_1443 666bf0afe7ebf45df4eee822e5313411 571 ProSitePatterns PS00211 ABC transporters family signature. 472 486 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_1443 666bf0afe7ebf45df4eee822e5313411 571 SMART SM00382 361 562 9.2E-16 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_1443 666bf0afe7ebf45df4eee822e5313411 571 Gene3D G3DSA:3.40.50.300 324 568 4.5E-82 T 18-10-2018 SHALO_0697 052e50270812499e599fa2aee2873085 460 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 20 128 6.0E-31 T 18-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 SHALO_0697 052e50270812499e599fa2aee2873085 460 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 142 447 7.9E-31 T 18-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_0697 052e50270812499e599fa2aee2873085 460 Gene3D G3DSA:1.10.1060.10 3 142 4.4E-28 T 18-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 SHALO_0697 052e50270812499e599fa2aee2873085 460 Gene3D G3DSA:3.50.50.60 240 392 8.9E-55 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SHALO_0697 052e50270812499e599fa2aee2873085 460 Gene3D G3DSA:3.50.50.60 145 454 8.9E-55 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SHALO_0697 052e50270812499e599fa2aee2873085 460 SUPERFAMILY SSF51971 140 393 3.41E-64 T 18-10-2018 SHALO_0697 052e50270812499e599fa2aee2873085 460 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 3 457 1.3E-167 T 18-10-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 SHALO_0697 052e50270812499e599fa2aee2873085 460 SUPERFAMILY SSF46548 4 152 2.09E-31 T 18-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 SHALO_0697 052e50270812499e599fa2aee2873085 460 PRINTS PR00419 Adrenodoxin reductase family signature 208 218 7.4E-30 T 18-10-2018 SHALO_0697 052e50270812499e599fa2aee2873085 460 PRINTS PR00419 Adrenodoxin reductase family signature 316 329 7.4E-30 T 18-10-2018 SHALO_0697 052e50270812499e599fa2aee2873085 460 PRINTS PR00419 Adrenodoxin reductase family signature 143 165 7.4E-30 T 18-10-2018 SHALO_0697 052e50270812499e599fa2aee2873085 460 PRINTS PR00419 Adrenodoxin reductase family signature 166 179 7.4E-30 T 18-10-2018 SHALO_0697 052e50270812499e599fa2aee2873085 460 PRINTS PR00419 Adrenodoxin reductase family signature 282 296 7.4E-30 T 18-10-2018 SHALO_0977 18526b78dbaac801b55830bf238a094b 399 Pfam PF03573 outer membrane porin, OprD family 114 398 5.1E-10 T 18-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 SHALO_0977 18526b78dbaac801b55830bf238a094b 399 SUPERFAMILY SSF56935 70 399 1.56E-7 T 18-10-2018 SHALO_0977 18526b78dbaac801b55830bf238a094b 399 Gene3D G3DSA:2.40.160.10 32 399 8.8E-26 T 18-10-2018 IPR023614 Porin domain superfamily SHALO_0216 83e7c124fcf5eacd64fed886c6ca1ff0 105 PRINTS PR00421 Thioredoxin family signature 29 38 4.1E-10 T 18-10-2018 SHALO_0216 83e7c124fcf5eacd64fed886c6ca1ff0 105 PRINTS PR00421 Thioredoxin family signature 69 80 4.1E-10 T 18-10-2018 SHALO_0216 83e7c124fcf5eacd64fed886c6ca1ff0 105 PRINTS PR00421 Thioredoxin family signature 21 29 4.1E-10 T 18-10-2018 SHALO_0216 83e7c124fcf5eacd64fed886c6ca1ff0 105 ProSitePatterns PS00194 Thioredoxin family active site. 22 40 - T 18-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 SHALO_0216 83e7c124fcf5eacd64fed886c6ca1ff0 105 PIRSF PIRSF000077 1 105 1.6E-39 T 18-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SHALO_0216 83e7c124fcf5eacd64fed886c6ca1ff0 105 Gene3D G3DSA:3.40.30.10 2 105 3.4E-35 T 18-10-2018 SHALO_0216 83e7c124fcf5eacd64fed886c6ca1ff0 105 Pfam PF00085 Thioredoxin 5 102 3.1E-32 T 18-10-2018 IPR013766 Thioredoxin domain GO:0045454 SHALO_0216 83e7c124fcf5eacd64fed886c6ca1ff0 105 TIGRFAM TIGR01068 thioredoxin: thioredoxin 8 103 3.3E-38 T 18-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SHALO_0216 83e7c124fcf5eacd64fed886c6ca1ff0 105 SUPERFAMILY SSF52833 3 105 8.63E-38 T 18-10-2018 IPR036249 Thioredoxin-like superfamily SHALO_1913 baf120157b09d346aa9152aa2d802b1e 270 Pfam PF00293 NUDIX domain 148 254 2.1E-20 T 18-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 SHALO_1913 baf120157b09d346aa9152aa2d802b1e 270 Gene3D G3DSA:3.90.79.20 17 143 3.7E-12 T 18-10-2018 SHALO_1913 baf120157b09d346aa9152aa2d802b1e 270 SUPERFAMILY SSF55811 16 113 1.38E-5 T 18-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 SHALO_1913 baf120157b09d346aa9152aa2d802b1e 270 SUPERFAMILY SSF55811 97 259 3.11E-41 T 18-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 SHALO_1913 baf120157b09d346aa9152aa2d802b1e 270 PRINTS PR00502 NUDIX hydrolase family signature 186 201 6.6E-5 T 18-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 SHALO_1913 baf120157b09d346aa9152aa2d802b1e 270 PRINTS PR00502 NUDIX hydrolase family signature 172 186 6.6E-5 T 18-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 SHALO_1913 baf120157b09d346aa9152aa2d802b1e 270 Gene3D G3DSA:3.90.79.10 144 270 5.6E-42 T 18-10-2018 SHALO_1913 baf120157b09d346aa9152aa2d802b1e 270 ProSitePatterns PS00893 Nudix box signature. 177 198 - T 18-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 SHALO_1686 ca1073686c8bb736f606363eebe76d6e 309 TIGRFAM TIGR01136 cysKM: cysteine synthase 7 304 3.9E-131 T 18-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 SHALO_1686 ca1073686c8bb736f606363eebe76d6e 309 SUPERFAMILY SSF53686 2 303 1.96E-102 T 18-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme SHALO_1686 ca1073686c8bb736f606363eebe76d6e 309 Gene3D G3DSA:3.40.50.1100 44 143 1.0E-123 T 18-10-2018 SHALO_1686 ca1073686c8bb736f606363eebe76d6e 309 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 32 50 - T 18-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 SHALO_1686 ca1073686c8bb736f606363eebe76d6e 309 Gene3D G3DSA:3.40.50.1100 5 300 1.0E-123 T 18-10-2018 SHALO_1686 ca1073686c8bb736f606363eebe76d6e 309 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 7 293 6.6E-69 T 18-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme SHALO_1686 ca1073686c8bb736f606363eebe76d6e 309 TIGRFAM TIGR01139 cysK: cysteine synthase A 7 304 9.4E-136 T 18-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 SHALO_2697 4e8b3f6c915090067c218efa5813a6f1 151 SMART SM00347 37 137 1.2E-21 T 18-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SHALO_2697 4e8b3f6c915090067c218efa5813a6f1 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 97 113 5.7E-5 T 18-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SHALO_2697 4e8b3f6c915090067c218efa5813a6f1 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 127 147 5.7E-5 T 18-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SHALO_2697 4e8b3f6c915090067c218efa5813a6f1 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 78 93 5.7E-5 T 18-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SHALO_2697 4e8b3f6c915090067c218efa5813a6f1 151 Pfam PF01047 MarR family 44 100 1.4E-11 T 18-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SHALO_2697 4e8b3f6c915090067c218efa5813a6f1 151 SUPERFAMILY SSF46785 13 149 4.42E-30 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SHALO_2697 4e8b3f6c915090067c218efa5813a6f1 151 Gene3D G3DSA:1.10.10.10 2 150 5.3E-30 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_1739 fda2593baf3cfff7d9744add74f2bb78 473 Pfam PF13365 Trypsin-like peptidase domain 100 235 4.7E-35 T 18-10-2018 SHALO_1739 fda2593baf3cfff7d9744add74f2bb78 473 PRINTS PR00834 HtrA/DegQ protease family signature 131 151 4.6E-53 T 18-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SHALO_1739 fda2593baf3cfff7d9744add74f2bb78 473 PRINTS PR00834 HtrA/DegQ protease family signature 109 121 4.6E-53 T 18-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SHALO_1739 fda2593baf3cfff7d9744add74f2bb78 473 PRINTS PR00834 HtrA/DegQ protease family signature 228 245 4.6E-53 T 18-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SHALO_1739 fda2593baf3cfff7d9744add74f2bb78 473 PRINTS PR00834 HtrA/DegQ protease family signature 171 195 4.6E-53 T 18-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SHALO_1739 fda2593baf3cfff7d9744add74f2bb78 473 PRINTS PR00834 HtrA/DegQ protease family signature 312 324 4.6E-53 T 18-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SHALO_1739 fda2593baf3cfff7d9744add74f2bb78 473 PRINTS PR00834 HtrA/DegQ protease family signature 206 223 4.6E-53 T 18-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SHALO_1739 fda2593baf3cfff7d9744add74f2bb78 473 Gene3D G3DSA:2.40.10.120 41 267 6.5E-82 T 18-10-2018 SHALO_1739 fda2593baf3cfff7d9744add74f2bb78 473 SUPERFAMILY SSF50156 383 465 1.04E-11 T 18-10-2018 IPR036034 PDZ superfamily GO:0005515 SHALO_1739 fda2593baf3cfff7d9744add74f2bb78 473 SUPERFAMILY SSF50156 232 354 5.13E-20 T 18-10-2018 IPR036034 PDZ superfamily GO:0005515 SHALO_1739 fda2593baf3cfff7d9744add74f2bb78 473 SMART SM00228 383 465 0.0094 T 18-10-2018 IPR001478 PDZ domain GO:0005515 SHALO_1739 fda2593baf3cfff7d9744add74f2bb78 473 SMART SM00228 274 354 2.1E-9 T 18-10-2018 IPR001478 PDZ domain GO:0005515 SHALO_1739 fda2593baf3cfff7d9744add74f2bb78 473 Gene3D G3DSA:2.30.42.60 375 472 2.4E-14 T 18-10-2018 SHALO_1739 fda2593baf3cfff7d9744add74f2bb78 473 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 43 471 2.3E-141 T 18-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 SHALO_1739 fda2593baf3cfff7d9744add74f2bb78 473 Pfam PF13180 PDZ domain 406 455 3.6E-7 T 18-10-2018 IPR001478 PDZ domain GO:0005515 SHALO_1739 fda2593baf3cfff7d9744add74f2bb78 473 Pfam PF13180 PDZ domain 274 363 5.9E-17 T 18-10-2018 IPR001478 PDZ domain GO:0005515 SHALO_1739 fda2593baf3cfff7d9744add74f2bb78 473 SUPERFAMILY SSF50494 40 270 5.17E-64 T 18-10-2018 IPR009003 Peptidase S1, PA clan SHALO_1739 fda2593baf3cfff7d9744add74f2bb78 473 Gene3D G3DSA:2.30.42.10 269 374 2.1E-23 T 18-10-2018 SHALO_0617 ddf186cfcd24bac745c54c4462422536 224 Gene3D G3DSA:3.40.50.2300 7 138 3.7E-31 T 18-10-2018 SHALO_0617 ddf186cfcd24bac745c54c4462422536 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 224 6.6E-11 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_0617 ddf186cfcd24bac745c54c4462422536 224 SMART SM00862 155 224 1.6E-9 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_0617 ddf186cfcd24bac745c54c4462422536 224 SUPERFAMILY SSF52172 11 189 1.57E-34 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_0617 ddf186cfcd24bac745c54c4462422536 224 SMART SM00448 12 123 5.0E-28 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_0617 ddf186cfcd24bac745c54c4462422536 224 Pfam PF00072 Response regulator receiver domain 14 123 3.3E-24 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_0617 ddf186cfcd24bac745c54c4462422536 224 Gene3D G3DSA:1.10.10.10 139 224 3.1E-13 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_1504 ea027b061e16ae1dea9473c4947b0ce2 111 Pfam PF14358 Domain of unknown function (DUF4405) 5 58 1.4E-6 T 18-10-2018 IPR025517 Domain of unknown function DUF4405 SHALO_2527 8926fa03445b59965ced46f041e8b841 229 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 156 229 1.6E-14 T 18-10-2018 IPR006260 TonB/TolA, C-terminal SHALO_2527 8926fa03445b59965ced46f041e8b841 229 SUPERFAMILY SSF74653 129 229 6.02E-16 T 18-10-2018 SHALO_2527 8926fa03445b59965ced46f041e8b841 229 Gene3D G3DSA:3.30.1150.10 108 229 8.1E-21 T 18-10-2018 SHALO_2527 8926fa03445b59965ced46f041e8b841 229 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 153 228 1.4E-15 T 18-10-2018 IPR037682 TonB, C-terminal GO:0055085 SHALO_2560 82bfe8ff5239db370cc2479b4287c9dd 234 SUPERFAMILY SSF52540 14 234 4.09E-60 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_2560 82bfe8ff5239db370cc2479b4287c9dd 234 Pfam PF00005 ABC transporter 34 183 2.0E-35 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_2560 82bfe8ff5239db370cc2479b4287c9dd 234 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_2560 82bfe8ff5239db370cc2479b4287c9dd 234 SMART SM00382 43 232 6.7E-17 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_2560 82bfe8ff5239db370cc2479b4287c9dd 234 Gene3D G3DSA:3.40.50.300 12 234 1.8E-61 T 18-10-2018 SHALO_2264 22f42b387e36cc83ec6199f1f4eef03f 444 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 13 434 1.2E-79 T 18-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit SHALO_2264 22f42b387e36cc83ec6199f1f4eef03f 444 PIRSF PIRSF006066 7 444 8.7E-90 T 18-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 SHALO_2264 22f42b387e36cc83ec6199f1f4eef03f 444 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 24 439 3.5E-100 T 18-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 SHALO_1278 0123fea692117ad6ee21f11c81e8e449 218 SMART SM00862 146 217 5.5E-19 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_1278 0123fea692117ad6ee21f11c81e8e449 218 Gene3D G3DSA:1.10.10.10 125 218 8.5E-24 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_1278 0123fea692117ad6ee21f11c81e8e449 218 SMART SM00448 1 112 3.9E-31 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_1278 0123fea692117ad6ee21f11c81e8e449 218 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 217 1.5E-20 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_1278 0123fea692117ad6ee21f11c81e8e449 218 Pfam PF00072 Response regulator receiver domain 3 112 2.4E-23 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_1278 0123fea692117ad6ee21f11c81e8e449 218 SUPERFAMILY SSF52172 1 170 8.4E-33 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_1278 0123fea692117ad6ee21f11c81e8e449 218 Gene3D G3DSA:3.40.50.2300 1 124 4.9E-31 T 18-10-2018 SHALO_0406 6b6c9abaa8affd41ab2477be8c917989 317 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 6 314 1.8E-109 T 18-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family SHALO_0406 6b6c9abaa8affd41ab2477be8c917989 317 SUPERFAMILY SSF53850 22 316 7.0E-80 T 18-10-2018 SHALO_0406 6b6c9abaa8affd41ab2477be8c917989 317 Gene3D G3DSA:3.40.190.10 26 314 1.7E-105 T 18-10-2018 SHALO_0406 6b6c9abaa8affd41ab2477be8c917989 317 Pfam PF16868 NMT1-like family 26 314 6.7E-95 T 18-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family SHALO_0406 6b6c9abaa8affd41ab2477be8c917989 317 Gene3D G3DSA:3.40.190.10 113 251 1.7E-105 T 18-10-2018 SHALO_2680 33ff2184d3be96dfd60803146b1c762d 160 Gene3D G3DSA:2.40.128.110 17 160 7.8E-16 T 18-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily SHALO_2680 33ff2184d3be96dfd60803146b1c762d 160 Pfam PF04264 YceI-like domain 37 158 1.3E-9 T 18-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SHALO_2680 33ff2184d3be96dfd60803146b1c762d 160 SUPERFAMILY SSF101874 30 158 3.27E-10 T 18-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily SHALO_0852 89a72301fb85b8200a8f1e2731a0f748 403 SUPERFAMILY SSF52374 10 319 1.29E-87 T 18-10-2018 SHALO_0852 89a72301fb85b8200a8f1e2731a0f748 403 Pfam PF01479 S4 domain 343 382 1.6E-6 T 18-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_0852 89a72301fb85b8200a8f1e2731a0f748 403 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 6 402 7.2E-118 T 18-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 SHALO_0852 89a72301fb85b8200a8f1e2731a0f748 403 Gene3D G3DSA:1.10.240.10 228 329 6.5E-18 T 18-10-2018 SHALO_0852 89a72301fb85b8200a8f1e2731a0f748 403 Pfam PF00579 tRNA synthetases class I (W and Y) 37 321 2.3E-74 T 18-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_0852 89a72301fb85b8200a8f1e2731a0f748 403 Gene3D G3DSA:3.10.290.10 330 402 2.1E-18 T 18-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 SHALO_0852 89a72301fb85b8200a8f1e2731a0f748 403 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 183 205 7.8E-22 T 18-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 SHALO_0852 89a72301fb85b8200a8f1e2731a0f748 403 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 166 181 7.8E-22 T 18-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 SHALO_0852 89a72301fb85b8200a8f1e2731a0f748 403 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 217 229 7.8E-22 T 18-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 SHALO_0852 89a72301fb85b8200a8f1e2731a0f748 403 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 51 73 7.8E-22 T 18-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 SHALO_0852 89a72301fb85b8200a8f1e2731a0f748 403 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 47 57 - T 18-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_0852 89a72301fb85b8200a8f1e2731a0f748 403 SMART SM00363 342 403 2.2E-5 T 18-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_0852 89a72301fb85b8200a8f1e2731a0f748 403 SUPERFAMILY SSF55174 305 402 1.96E-17 T 18-10-2018 SHALO_0852 89a72301fb85b8200a8f1e2731a0f748 403 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 3 402 45.088 T 18-10-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 SHALO_0852 89a72301fb85b8200a8f1e2731a0f748 403 Gene3D G3DSA:3.40.50.620 6 223 1.2E-64 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_1505 b2ae06370dd32a414e4665a4063965a8 215 Gene3D G3DSA:3.30.70.20 163 215 1.1E-6 T 18-10-2018 SHALO_1505 b2ae06370dd32a414e4665a4063965a8 215 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 129 140 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_1505 b2ae06370dd32a414e4665a4063965a8 215 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 50 61 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_1505 b2ae06370dd32a414e4665a4063965a8 215 SUPERFAMILY SSF54862 30 211 1.19E-23 T 18-10-2018 SHALO_1505 b2ae06370dd32a414e4665a4063965a8 215 Pfam PF12800 4Fe-4S binding domain 127 140 0.24 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_1505 b2ae06370dd32a414e4665a4063965a8 215 Gene3D G3DSA:3.30.70.20 43 93 3.1E-7 T 18-10-2018 SHALO_1505 b2ae06370dd32a414e4665a4063965a8 215 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 183 194 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_1505 b2ae06370dd32a414e4665a4063965a8 215 Pfam PF00037 4Fe-4S binding domain 176 198 1.0E-5 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_1505 b2ae06370dd32a414e4665a4063965a8 215 Gene3D G3DSA:3.30.70.20 94 153 2.2E-8 T 18-10-2018 SHALO_1505 b2ae06370dd32a414e4665a4063965a8 215 Pfam PF12838 4Fe-4S dicluster domain 49 107 9.8E-9 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_2188 5de76ed8390f931d398f7b27ec28127e 227 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 1 222 3.7E-40 T 18-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 SHALO_2188 5de76ed8390f931d398f7b27ec28127e 227 Gene3D G3DSA:3.20.20.70 1 227 2.9E-68 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_2188 5de76ed8390f931d398f7b27ec28127e 227 SMART SM00934 2 223 7.4E-72 T 18-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 SHALO_2188 5de76ed8390f931d398f7b27ec28127e 227 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 56 69 - T 18-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 SHALO_2188 5de76ed8390f931d398f7b27ec28127e 227 SUPERFAMILY SSF51366 2 225 2.95E-56 T 18-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 SHALO_2188 5de76ed8390f931d398f7b27ec28127e 227 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 3 223 8.0E-58 T 18-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 SHALO_2411 abd06fbe5323b812b5151a97a7004ca5 208 Pfam PF01479 S4 domain 98 145 6.2E-20 T 18-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_2411 abd06fbe5323b812b5151a97a7004ca5 208 SUPERFAMILY SSF55174 2 208 1.57E-69 T 18-10-2018 SHALO_2411 abd06fbe5323b812b5151a97a7004ca5 208 SMART SM01390 3 97 4.2E-45 T 18-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 SHALO_2411 abd06fbe5323b812b5151a97a7004ca5 208 Gene3D G3DSA:3.10.290.10 97 193 1.5E-80 T 18-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 SHALO_2411 abd06fbe5323b812b5151a97a7004ca5 208 SMART SM00363 98 162 7.2E-19 T 18-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_2411 abd06fbe5323b812b5151a97a7004ca5 208 ProSitePatterns PS00632 Ribosomal protein S4 signature. 96 120 - T 18-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_2411 abd06fbe5323b812b5151a97a7004ca5 208 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 97 7.6E-30 T 18-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 SHALO_2411 abd06fbe5323b812b5151a97a7004ca5 208 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 208 1.0E-82 T 18-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 SHALO_2411 abd06fbe5323b812b5151a97a7004ca5 208 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 208 36.133 T 18-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 SHALO_2411 abd06fbe5323b812b5151a97a7004ca5 208 Gene3D G3DSA:1.10.1050.10 6 208 1.5E-80 T 18-10-2018 SHALO_2144 9445d8483082281a3e869fc557df6bef 75 Pfam PF02597 ThiS family 5 75 1.0E-12 T 18-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 SHALO_2144 9445d8483082281a3e869fc557df6bef 75 SUPERFAMILY SSF54285 3 75 3.18E-12 T 18-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp SHALO_2144 9445d8483082281a3e869fc557df6bef 75 Gene3D G3DSA:3.10.20.30 1 75 8.4E-10 T 18-10-2018 IPR012675 Beta-grasp domain superfamily SHALO_2537 7e701ad448fc1313f52a826fe0f8315b 680 SUPERFAMILY SSF56935 22 680 6.11E-114 T 18-10-2018 SHALO_2537 7e701ad448fc1313f52a826fe0f8315b 680 Pfam PF07715 TonB-dependent Receptor Plug Domain 42 144 3.2E-11 T 18-10-2018 IPR012910 TonB-dependent receptor, plug domain SHALO_2537 7e701ad448fc1313f52a826fe0f8315b 680 Gene3D G3DSA:2.40.170.20 32 680 2.5E-143 T 18-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily SHALO_2537 7e701ad448fc1313f52a826fe0f8315b 680 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 663 680 - T 18-10-2018 IPR010917 TonB-dependent receptor, conserved site SHALO_2537 7e701ad448fc1313f52a826fe0f8315b 680 Pfam PF00593 TonB dependent receptor 226 679 4.3E-48 T 18-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel SHALO_1598 f492e873d174bcc99187c44b0951e8b1 490 Gene3D G3DSA:3.50.50.100 57 485 8.4E-87 T 18-10-2018 SHALO_1598 f492e873d174bcc99187c44b0951e8b1 490 SUPERFAMILY SSF51905 59 418 4.92E-28 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SHALO_1598 f492e873d174bcc99187c44b0951e8b1 490 SUPERFAMILY SSF51905 227 317 2.85E-10 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SHALO_1598 f492e873d174bcc99187c44b0951e8b1 490 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 59 176 8.0E-15 T 18-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_2108 50cd0838c91438b20907f16ff14e594a 354 SMART SM00729 49 267 0.0029 T 18-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 SHALO_2108 50cd0838c91438b20907f16ff14e594a 354 Pfam PF04055 Radical SAM superfamily 53 224 6.5E-16 T 18-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 SHALO_2108 50cd0838c91438b20907f16ff14e594a 354 TIGRFAM TIGR03700 mena_SCO4494: putative menaquinone biosynthesis radical SAM enzyme, SCO4494 family 4 351 3.6E-146 T 18-10-2018 IPR022432 Aminodeoxyfutalosine synthase GO:0009234 KEGG: 00130+2.5.1.120|MetaCyc: PWY-7371|MetaCyc: PWY-7374 SHALO_2108 50cd0838c91438b20907f16ff14e594a 354 Hamap MF_00993 Aminodeoxyfutalosine synthase [mqnE]. 1 354 48.752 T 18-10-2018 IPR022432 Aminodeoxyfutalosine synthase GO:0009234 KEGG: 00130+2.5.1.120|MetaCyc: PWY-7371|MetaCyc: PWY-7374 SHALO_2108 50cd0838c91438b20907f16ff14e594a 354 Gene3D G3DSA:3.20.20.70 1 324 1.8E-54 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_2108 50cd0838c91438b20907f16ff14e594a 354 SUPERFAMILY SSF102114 13 305 5.49E-43 T 18-10-2018 SHALO_2108 50cd0838c91438b20907f16ff14e594a 354 TIGRFAM TIGR00423 TIGR00423: radical SAM domain protein, CofH subfamily 45 351 1.0E-115 T 18-10-2018 IPR020050 FO synthase, subunit 2 GO:0016765 KEGG: 00680+2.5.1.77 SHALO_2108 50cd0838c91438b20907f16ff14e594a 354 PIRSF PIRSF004762 2 354 6.7E-100 T 18-10-2018 SHALO_1319 f3c00b983173ec3a9a88c45cc9d9ac8b 361 Gene3D G3DSA:3.30.2350.20 3 175 1.4E-49 T 18-10-2018 SHALO_1319 f3c00b983173ec3a9a88c45cc9d9ac8b 361 SUPERFAMILY SSF55120 2 358 1.34E-84 T 18-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHALO_1319 f3c00b983173ec3a9a88c45cc9d9ac8b 361 TIGRFAM TIGR00094 tRNA_TruD_broad: tRNA pseudouridine synthase, TruD family 12 185 1.1E-51 T 18-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHALO_1319 f3c00b983173ec3a9a88c45cc9d9ac8b 361 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 1 361 26.464 T 18-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHALO_1319 f3c00b983173ec3a9a88c45cc9d9ac8b 361 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 184 355 1.3E-13 T 18-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHALO_1319 f3c00b983173ec3a9a88c45cc9d9ac8b 361 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 5 180 2.9E-40 T 18-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHALO_1319 f3c00b983173ec3a9a88c45cc9d9ac8b 361 Gene3D G3DSA:3.30.2350.20 176 360 8.6E-16 T 18-10-2018 SHALO_0653 251b7a8109cdaea33fd7b9d3aed2559c 67 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 7 62 5.4E-15 T 18-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SHALO_0653 251b7a8109cdaea33fd7b9d3aed2559c 67 SUPERFAMILY SSF116842 2 63 3.4E-12 T 18-10-2018 SHALO_0653 251b7a8109cdaea33fd7b9d3aed2559c 67 Gene3D G3DSA:1.10.287.1040 2 67 2.9E-9 T 18-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 SHALO_0653 251b7a8109cdaea33fd7b9d3aed2559c 67 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 7 67 10.891 T 18-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SHALO_0653 251b7a8109cdaea33fd7b9d3aed2559c 67 Pfam PF02609 Exonuclease VII small subunit 8 56 8.7E-13 T 18-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SHALO_2654 8290f8e95699d470796ee851fb3d9ea5 260 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 21 259 1.3E-56 T 18-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 SHALO_2654 8290f8e95699d470796ee851fb3d9ea5 260 Pfam PF02634 FdhD/NarQ family 25 259 2.0E-70 T 18-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 SHALO_2654 8290f8e95699d470796ee851fb3d9ea5 260 Gene3D G3DSA:3.40.140.10 115 260 2.2E-44 T 18-10-2018 SHALO_2654 8290f8e95699d470796ee851fb3d9ea5 260 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 2 259 28.449 T 18-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 SHALO_2654 8290f8e95699d470796ee851fb3d9ea5 260 Gene3D G3DSA:3.10.20.10 27 109 1.6E-13 T 18-10-2018 SHALO_2654 8290f8e95699d470796ee851fb3d9ea5 260 PIRSF PIRSF015626 2 260 5.4E-80 T 18-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 SHALO_2654 8290f8e95699d470796ee851fb3d9ea5 260 SUPERFAMILY SSF53927 4 258 7.52E-69 T 18-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 SHALO_2819 f47ee55e010e1373b237bbf99c0cad31 322 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 20 320 9.1E-18 T 18-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 SHALO_2819 f47ee55e010e1373b237bbf99c0cad31 322 SUPERFAMILY SSF51735 106 290 2.83E-45 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_2819 f47ee55e010e1373b237bbf99c0cad31 322 Gene3D G3DSA:3.40.50.720 3 307 8.0E-112 T 18-10-2018 SHALO_2819 f47ee55e010e1373b237bbf99c0cad31 322 SUPERFAMILY SSF52283 3 124 1.13E-21 T 18-10-2018 SHALO_2819 f47ee55e010e1373b237bbf99c0cad31 322 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 289 1.2E-47 T 18-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 SHALO_2819 f47ee55e010e1373b237bbf99c0cad31 322 Gene3D G3DSA:3.40.50.720 102 292 8.0E-112 T 18-10-2018 SHALO_1108 41597c2874d0f960dff0e994771decf3 349 PIRSF PIRSF004762 1 348 3.8E-107 T 18-10-2018 SHALO_1108 41597c2874d0f960dff0e994771decf3 349 SUPERFAMILY SSF102114 3 335 5.76E-51 T 18-10-2018 SHALO_1108 41597c2874d0f960dff0e994771decf3 349 Hamap MF_00992 Cyclic dehypoxanthine futalosine synthase [mqnC]. 1 348 53.332 T 18-10-2018 IPR022431 Cyclic dehypoxanthine futalosine synthase GO:0009234 KEGG: 00130+1.21.98.1|MetaCyc: PWY-7371|MetaCyc: PWY-7374 SHALO_1108 41597c2874d0f960dff0e994771decf3 349 TIGRFAM TIGR03699 menaquin_MqnC: dehypoxanthine futalosine cyclase 2 344 1.6E-154 T 18-10-2018 IPR022431 Cyclic dehypoxanthine futalosine synthase GO:0009234 KEGG: 00130+1.21.98.1|MetaCyc: PWY-7371|MetaCyc: PWY-7374 SHALO_1108 41597c2874d0f960dff0e994771decf3 349 Gene3D G3DSA:3.20.20.70 1 344 5.9E-54 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_1108 41597c2874d0f960dff0e994771decf3 349 TIGRFAM TIGR00423 TIGR00423: radical SAM domain protein, CofH subfamily 39 345 8.0E-130 T 18-10-2018 IPR020050 FO synthase, subunit 2 GO:0016765 KEGG: 00680+2.5.1.77 SHALO_1108 41597c2874d0f960dff0e994771decf3 349 Pfam PF04055 Radical SAM superfamily 46 216 2.2E-14 T 18-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 SHALO_1097 4db130f6d39539a5719b5df716e76448 401 Gene3D G3DSA:3.40.50.1100 18 213 1.4E-179 T 18-10-2018 SHALO_1097 4db130f6d39539a5719b5df716e76448 401 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 10 398 51.974 T 18-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 SHALO_1097 4db130f6d39539a5719b5df716e76448 401 PIRSF PIRSF001413 5 400 3.7E-165 T 18-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 SHALO_1097 4db130f6d39539a5719b5df716e76448 401 SUPERFAMILY SSF53686 11 393 6.29E-145 T 18-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme SHALO_1097 4db130f6d39539a5719b5df716e76448 401 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 61 385 4.0E-44 T 18-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme SHALO_1097 4db130f6d39539a5719b5df716e76448 401 Gene3D G3DSA:3.40.50.1100 62 391 1.4E-179 T 18-10-2018 SHALO_1097 4db130f6d39539a5719b5df716e76448 401 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 88 102 - T 18-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 SHALO_1097 4db130f6d39539a5719b5df716e76448 401 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 15 394 6.5E-191 T 18-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 SHALO_0235 90b04fb87629bc9d154b962e7bda6b88 1085 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 708 722 - T 18-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SHALO_0235 90b04fb87629bc9d154b962e7bda6b88 1085 SUPERFAMILY SSF52440 1 125 4.17E-44 T 18-10-2018 IPR016185 Pre-ATP-grasp domain superfamily SHALO_0235 90b04fb87629bc9d154b962e7bda6b88 1085 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 295 302 - T 18-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SHALO_0235 90b04fb87629bc9d154b962e7bda6b88 1085 SUPERFAMILY SSF52335 950 1084 1.7E-33 T 18-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily SHALO_0235 90b04fb87629bc9d154b962e7bda6b88 1085 SUPERFAMILY SSF56059 126 397 6.54E-102 T 18-10-2018 SHALO_0235 90b04fb87629bc9d154b962e7bda6b88 1085 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1075 12.815 T 18-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 SHALO_0235 90b04fb87629bc9d154b962e7bda6b88 1085 Gene3D G3DSA:3.30.470.20 117 399 1.3E-117 T 18-10-2018 SHALO_0235 90b04fb87629bc9d154b962e7bda6b88 1085 Gene3D G3DSA:3.40.50.20 520 661 1.6E-58 T 18-10-2018 SHALO_0235 90b04fb87629bc9d154b962e7bda6b88 1085 SUPERFAMILY SSF48108 392 543 1.22E-41 T 18-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 SHALO_0235 90b04fb87629bc9d154b962e7bda6b88 1085 Pfam PF02142 MGS-like domain 972 1054 3.3E-20 T 18-10-2018 IPR011607 Methylglyoxal synthase-like domain SHALO_0235 90b04fb87629bc9d154b962e7bda6b88 1085 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1065 0.0 T 18-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 SHALO_0235 90b04fb87629bc9d154b962e7bda6b88 1085 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 418 541 1.8E-37 T 18-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 SHALO_0235 90b04fb87629bc9d154b962e7bda6b88 1085 SMART SM01096 415 542 4.5E-60 T 18-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 SHALO_0235 90b04fb87629bc9d154b962e7bda6b88 1085 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 837 844 - T 18-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SHALO_0235 90b04fb87629bc9d154b962e7bda6b88 1085 Gene3D G3DSA:3.40.50.20 1 112 1.5E-45 T 18-10-2018 SHALO_0235 90b04fb87629bc9d154b962e7bda6b88 1085 SUPERFAMILY SSF56059 672 946 1.63E-102 T 18-10-2018 SHALO_0235 90b04fb87629bc9d154b962e7bda6b88 1085 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 166 178 2.9E-63 T 18-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 SHALO_0235 90b04fb87629bc9d154b962e7bda6b88 1085 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 202 221 2.9E-63 T 18-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 SHALO_0235 90b04fb87629bc9d154b962e7bda6b88 1085 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 376 394 2.9E-63 T 18-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 SHALO_0235 90b04fb87629bc9d154b962e7bda6b88 1085 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 237 254 2.9E-63 T 18-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 SHALO_0235 90b04fb87629bc9d154b962e7bda6b88 1085 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 295 324 2.9E-63 T 18-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 SHALO_0235 90b04fb87629bc9d154b962e7bda6b88 1085 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 2.9E-63 T 18-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 SHALO_0235 90b04fb87629bc9d154b962e7bda6b88 1085 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 2.9E-63 T 18-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 SHALO_0235 90b04fb87629bc9d154b962e7bda6b88 1085 Gene3D G3DSA:3.30.470.20 665 948 2.8E-116 T 18-10-2018 SHALO_0235 90b04fb87629bc9d154b962e7bda6b88 1085 Gene3D G3DSA:3.40.50.1380 949 1085 1.5E-36 T 18-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily SHALO_0235 90b04fb87629bc9d154b962e7bda6b88 1085 SMART SM00851 968 1054 2.3E-30 T 18-10-2018 IPR011607 Methylglyoxal synthase-like domain SHALO_0235 90b04fb87629bc9d154b962e7bda6b88 1085 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 672 873 2.0E-37 T 18-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SHALO_0235 90b04fb87629bc9d154b962e7bda6b88 1085 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 126 332 1.7E-65 T 18-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SHALO_0235 90b04fb87629bc9d154b962e7bda6b88 1085 Gene3D G3DSA:1.10.1030.10 400 506 5.4E-29 T 18-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 SHALO_0235 90b04fb87629bc9d154b962e7bda6b88 1085 SUPERFAMILY SSF52440 556 674 1.08E-46 T 18-10-2018 IPR016185 Pre-ATP-grasp domain superfamily SHALO_0543 646e773a10e5e009f894bdc37225a4d1 661 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 41 50 - T 18-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_0543 646e773a10e5e009f894bdc37225a4d1 661 Gene3D G3DSA:3.50.50.60 7 426 5.8E-140 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SHALO_0543 646e773a10e5e009f894bdc37225a4d1 661 Gene3D G3DSA:1.20.58.100 442 559 1.8E-37 T 18-10-2018 SHALO_0543 646e773a10e5e009f894bdc37225a4d1 661 SUPERFAMILY SSF56425 251 374 1.94E-35 T 18-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_0543 646e773a10e5e009f894bdc37225a4d1 661 SUPERFAMILY SSF46977 463 658 1.96E-58 T 18-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_0543 646e773a10e5e009f894bdc37225a4d1 661 Gene3D G3DSA:3.90.700.10 277 389 5.8E-140 T 18-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_0543 646e773a10e5e009f894bdc37225a4d1 661 Pfam PF00890 FAD binding domain 7 415 1.4E-119 T 18-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_0543 646e773a10e5e009f894bdc37225a4d1 661 Pfam PF02910 Fumarate reductase flavoprotein C-term 473 601 6.4E-38 T 18-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_0543 646e773a10e5e009f894bdc37225a4d1 661 Gene3D G3DSA:1.10.472.70 560 652 1.6E-38 T 18-10-2018 SHALO_0543 646e773a10e5e009f894bdc37225a4d1 661 SUPERFAMILY SSF51905 5 459 9.51E-58 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SHALO_0543 646e773a10e5e009f894bdc37225a4d1 661 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 601 3.6E-222 T 18-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_0312 329ae348214fea0ec7591f2f2749e1cb 188 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 91 102 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_0312 329ae348214fea0ec7591f2f2749e1cb 188 Gene3D G3DSA:3.30.70.20 5 179 3.0E-54 T 18-10-2018 SHALO_0312 329ae348214fea0ec7591f2f2749e1cb 188 Pfam PF13247 4Fe-4S dicluster domain 53 147 1.3E-20 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_0312 329ae348214fea0ec7591f2f2749e1cb 188 SUPERFAMILY SSF54862 2 184 2.41E-57 T 18-10-2018 SHALO_0312 329ae348214fea0ec7591f2f2749e1cb 188 Gene3D G3DSA:3.30.70.20 65 117 3.0E-54 T 18-10-2018 SHALO_2024 9b6450a80e34f1cb17a383cea170c710 287 Gene3D G3DSA:3.20.80.10 131 286 5.7E-31 T 18-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily SHALO_2024 9b6450a80e34f1cb17a383cea170c710 287 SMART SM00342 29 113 2.0E-22 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_2024 9b6450a80e34f1cb17a383cea170c710 287 SUPERFAMILY SSF46689 12 63 4.39E-8 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SHALO_2024 9b6450a80e34f1cb17a383cea170c710 287 Pfam PF12833 Helix-turn-helix domain 37 114 1.0E-21 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_2024 9b6450a80e34f1cb17a383cea170c710 287 SUPERFAMILY SSF46689 67 114 1.34E-10 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SHALO_2024 9b6450a80e34f1cb17a383cea170c710 287 SMART SM00871 131 285 1.6E-20 T 18-10-2018 IPR010499 Bacterial transcription activator, effector binding SHALO_2024 9b6450a80e34f1cb17a383cea170c710 287 Gene3D G3DSA:1.10.10.60 4 62 4.1E-11 T 18-10-2018 SHALO_2024 9b6450a80e34f1cb17a383cea170c710 287 Gene3D G3DSA:1.10.10.60 63 118 6.8E-16 T 18-10-2018 SHALO_2024 9b6450a80e34f1cb17a383cea170c710 287 SUPERFAMILY SSF55136 132 285 3.14E-25 T 18-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily SHALO_2024 9b6450a80e34f1cb17a383cea170c710 287 Pfam PF06445 GyrI-like small molecule binding domain 133 285 4.7E-21 T 18-10-2018 IPR029442 GyrI-like small molecule binding domain SHALO_2024 9b6450a80e34f1cb17a383cea170c710 287 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 97 113 2.1E-6 T 18-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SHALO_2024 9b6450a80e34f1cb17a383cea170c710 287 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 82 97 2.1E-6 T 18-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SHALO_0828 e400ed5333f9bf2ca9f0461ed607131e 466 Gene3D G3DSA:1.20.1600.10 46 457 2.7E-116 T 18-10-2018 SHALO_0828 e400ed5333f9bf2ca9f0461ed607131e 466 SUPERFAMILY SSF56954 2 458 2.35E-101 T 18-10-2018 SHALO_0828 e400ed5333f9bf2ca9f0461ed607131e 466 Gene3D G3DSA:2.20.200.10 92 345 2.7E-116 T 18-10-2018 SHALO_0828 e400ed5333f9bf2ca9f0461ed607131e 466 Pfam PF02321 Outer membrane efflux protein 272 454 4.7E-31 T 18-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 SHALO_0828 e400ed5333f9bf2ca9f0461ed607131e 466 Pfam PF02321 Outer membrane efflux protein 55 245 1.5E-17 T 18-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 SHALO_0828 e400ed5333f9bf2ca9f0461ed607131e 466 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 12 456 6.5E-98 T 18-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 SHALO_1712 ebe3c2d5466bdc33f9fa763af67b7e9a 304 Gene3D G3DSA:3.40.50.300 5 290 1.2E-92 T 18-10-2018 SHALO_1712 ebe3c2d5466bdc33f9fa763af67b7e9a 304 SUPERFAMILY SSF52540 74 262 9.75E-28 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_1712 ebe3c2d5466bdc33f9fa763af67b7e9a 304 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 44 270 4.5E-111 T 18-10-2018 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 KEGG: 00190+2.7.4.1 SHALO_1712 ebe3c2d5466bdc33f9fa763af67b7e9a 304 PIRSF PIRSF028756 7 298 3.2E-113 T 18-10-2018 IPR016898 Polyphosphate kinase 2 KEGG: 00190+2.7.4.1 SHALO_1712 ebe3c2d5466bdc33f9fa763af67b7e9a 304 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 44 269 3.5E-100 T 18-10-2018 IPR022488 Polyphosphate kinase-2-related SHALO_1421 f9cb8f6051bb65984bb75fc524cb1f4c 389 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 386 1.7E-156 T 18-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 SHALO_1421 f9cb8f6051bb65984bb75fc524cb1f4c 389 Gene3D G3DSA:3.30.1490.20 21 104 7.7E-96 T 18-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 SHALO_1421 f9cb8f6051bb65984bb75fc524cb1f4c 389 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 387 43.453 T 18-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 SHALO_1421 f9cb8f6051bb65984bb75fc524cb1f4c 389 Pfam PF08442 ATP-grasp domain 2 202 3.1E-80 T 18-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 SHALO_1421 f9cb8f6051bb65984bb75fc524cb1f4c 389 Pfam PF00549 CoA-ligase 262 372 5.9E-20 T 18-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 SHALO_1421 f9cb8f6051bb65984bb75fc524cb1f4c 389 SUPERFAMILY SSF56059 1 238 2.05E-82 T 18-10-2018 SHALO_1421 f9cb8f6051bb65984bb75fc524cb1f4c 389 SUPERFAMILY SSF52210 240 386 3.92E-48 T 18-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 SHALO_1421 f9cb8f6051bb65984bb75fc524cb1f4c 389 Gene3D G3DSA:3.30.470.20 1 234 7.7E-96 T 18-10-2018 SHALO_1421 f9cb8f6051bb65984bb75fc524cb1f4c 389 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 281 - T 18-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 SHALO_1421 f9cb8f6051bb65984bb75fc524cb1f4c 389 PIRSF PIRSF001554 1 389 6.8E-152 T 18-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 SHALO_1421 f9cb8f6051bb65984bb75fc524cb1f4c 389 Gene3D G3DSA:3.40.50.261 240 389 7.6E-52 T 18-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 SHALO_2664 d7842722110ce381b9c46765db690a88 344 Gene3D G3DSA:3.20.20.30 1 339 7.8E-70 T 18-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 SHALO_2664 d7842722110ce381b9c46765db690a88 344 Pfam PF00296 Luciferase-like monooxygenase 1 303 1.6E-43 T 18-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 SHALO_2664 d7842722110ce381b9c46765db690a88 344 SUPERFAMILY SSF51679 1 336 3.18E-62 T 18-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 SHALO_1734 b1b807e661676543b4d57b90b443e898 156 SUPERFAMILY SSF55811 5 150 8.8E-25 T 18-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 SHALO_1734 b1b807e661676543b4d57b90b443e898 156 PRINTS PR00502 NUDIX hydrolase family signature 52 67 1.7E-6 T 18-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 SHALO_1734 b1b807e661676543b4d57b90b443e898 156 PRINTS PR00502 NUDIX hydrolase family signature 38 52 1.7E-6 T 18-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 SHALO_1734 b1b807e661676543b4d57b90b443e898 156 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 155 30.332 T 18-10-2018 IPR022927 RNA pyrophosphohydrolase RppH SHALO_1734 b1b807e661676543b4d57b90b443e898 156 ProSitePatterns PS00893 Nudix box signature. 43 64 - T 18-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 SHALO_1734 b1b807e661676543b4d57b90b443e898 156 Gene3D G3DSA:3.90.79.10 1 154 1.1E-37 T 18-10-2018 SHALO_1734 b1b807e661676543b4d57b90b443e898 156 Pfam PF00293 NUDIX domain 7 144 2.9E-21 T 18-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 SHALO_1343 23255ca2c4a8c35a9092e4c1092849e4 410 SUPERFAMILY SSF47781 293 368 1.89E-10 T 18-10-2018 IPR010994 RuvA domain 2-like SHALO_1343 23255ca2c4a8c35a9092e4c1092849e4 410 TIGRFAM TIGR03916 rSAM_link_UDG: putative DNA modification/repair radical SAM protein 6 394 1.4E-164 T 18-10-2018 IPR023874 DNA modification/repair radical SAM protein, putative SHALO_1343 23255ca2c4a8c35a9092e4c1092849e4 410 SUPERFAMILY SSF102114 31 272 1.24E-14 T 18-10-2018 SHALO_1343 23255ca2c4a8c35a9092e4c1092849e4 410 Gene3D G3DSA:3.20.20.70 49 248 1.9E-7 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_1219 5756229e428b31c36932b36fdf8c6aed 170 Pfam PF13420 Acetyltransferase (GNAT) domain 2 153 1.8E-24 T 18-10-2018 SHALO_1219 5756229e428b31c36932b36fdf8c6aed 170 Gene3D G3DSA:3.40.630.30 1 170 6.8E-52 T 18-10-2018 SHALO_1219 5756229e428b31c36932b36fdf8c6aed 170 SUPERFAMILY SSF55729 1 162 6.98E-35 T 18-10-2018 IPR016181 Acyl-CoA N-acyltransferase SHALO_2277 6e0bcc83460b9af2410306da6a6124dc 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 191 5.0E-5 T 18-10-2018 SHALO_2277 6e0bcc83460b9af2410306da6a6124dc 247 Gene3D G3DSA:3.40.50.720 1 247 5.0E-79 T 18-10-2018 SHALO_2277 6e0bcc83460b9af2410306da6a6124dc 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 7.5E-12 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_2277 6e0bcc83460b9af2410306da6a6124dc 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 7.5E-12 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_2277 6e0bcc83460b9af2410306da6a6124dc 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 7.5E-12 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_2277 6e0bcc83460b9af2410306da6a6124dc 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 245 1.4E-62 T 18-10-2018 SHALO_2277 6e0bcc83460b9af2410306da6a6124dc 247 SUPERFAMILY SSF51735 5 247 5.41E-79 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_2277 6e0bcc83460b9af2410306da6a6124dc 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 5.7E-41 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_2277 6e0bcc83460b9af2410306da6a6124dc 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 5.7E-41 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_2277 6e0bcc83460b9af2410306da6a6124dc 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 5.7E-41 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_2277 6e0bcc83460b9af2410306da6a6124dc 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 5.7E-41 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_2277 6e0bcc83460b9af2410306da6a6124dc 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 5.7E-41 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_2277 6e0bcc83460b9af2410306da6a6124dc 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 5.7E-41 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_2277 6e0bcc83460b9af2410306da6a6124dc 247 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 246 5.3E-96 T 18-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 SHALO_2277 6e0bcc83460b9af2410306da6a6124dc 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 18-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SHALO_0851 f3f05d0ff97c34fde316cfde3d074ac7 718 SMART SM00471 49 169 3.0E-8 T 18-10-2018 IPR003607 HD/PDEase domain SHALO_0851 f3f05d0ff97c34fde316cfde3d074ac7 718 Pfam PF13328 HD domain 34 191 1.2E-40 T 18-10-2018 IPR003607 HD/PDEase domain SHALO_0851 f3f05d0ff97c34fde316cfde3d074ac7 718 SUPERFAMILY SSF109604 27 205 2.35E-57 T 18-10-2018 SHALO_0851 f3f05d0ff97c34fde316cfde3d074ac7 718 SMART SM00954 254 363 1.8E-58 T 18-10-2018 IPR007685 RelA/SpoT GO:0015969 SHALO_0851 f3f05d0ff97c34fde316cfde3d074ac7 718 SUPERFAMILY SSF81301 208 369 1.96E-51 T 18-10-2018 SHALO_0851 f3f05d0ff97c34fde316cfde3d074ac7 718 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 37 689 1.0E-198 T 18-10-2018 IPR004811 RelA/SpoT family GO:0015969 SHALO_0851 f3f05d0ff97c34fde316cfde3d074ac7 718 SUPERFAMILY SSF55021 634 709 2.68E-6 T 18-10-2018 SHALO_0851 f3f05d0ff97c34fde316cfde3d074ac7 718 Gene3D G3DSA:3.10.20.30 393 466 2.2E-26 T 18-10-2018 IPR012675 Beta-grasp domain superfamily SHALO_0851 f3f05d0ff97c34fde316cfde3d074ac7 718 Pfam PF04607 Region found in RelA / SpoT proteins 254 362 8.0E-34 T 18-10-2018 IPR007685 RelA/SpoT GO:0015969 SHALO_0851 f3f05d0ff97c34fde316cfde3d074ac7 718 Gene3D G3DSA:3.30.460.10 208 343 9.0E-42 T 18-10-2018 SHALO_0851 f3f05d0ff97c34fde316cfde3d074ac7 718 Pfam PF02824 TGS domain 400 459 6.3E-17 T 18-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 SHALO_0851 f3f05d0ff97c34fde316cfde3d074ac7 718 SUPERFAMILY SSF81271 387 460 9.81E-18 T 18-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 SHALO_0851 f3f05d0ff97c34fde316cfde3d074ac7 718 Gene3D G3DSA:1.10.3210.10 9 206 1.9E-62 T 18-10-2018 SHALO_2125 4ac742541ac4299d142561078da3c2ad 303 Gene3D G3DSA:1.20.1530.20 176 303 1.7E-10 T 18-10-2018 IPR038770 Sodium/solute symporter superfamily SHALO_2125 4ac742541ac4299d142561078da3c2ad 303 Pfam PF03547 Membrane transport protein 156 297 3.2E-14 T 18-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 SHALO_0889 1ebd66711ca6e94038c5177e6ec14efe 237 Pfam PF00072 Response regulator receiver domain 21 130 2.3E-23 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_0889 1ebd66711ca6e94038c5177e6ec14efe 237 SMART SM00448 19 130 2.0E-25 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_0889 1ebd66711ca6e94038c5177e6ec14efe 237 Gene3D G3DSA:3.40.50.2300 7 144 6.4E-30 T 18-10-2018 SHALO_0889 1ebd66711ca6e94038c5177e6ec14efe 237 Gene3D G3DSA:1.10.10.10 147 235 7.5E-17 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_0889 1ebd66711ca6e94038c5177e6ec14efe 237 SMART SM00862 163 234 2.8E-13 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_0889 1ebd66711ca6e94038c5177e6ec14efe 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 168 234 9.0E-13 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_0889 1ebd66711ca6e94038c5177e6ec14efe 237 SUPERFAMILY SSF52172 17 180 1.99E-32 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_0889 1ebd66711ca6e94038c5177e6ec14efe 237 SUPERFAMILY SSF46894 157 234 8.33E-12 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHALO_2432 da1a53e71f1906e9d214ad435dd10040 93 Gene3D G3DSA:3.30.860.10 1 91 1.1E-37 T 18-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_2432 da1a53e71f1906e9d214ad435dd10040 93 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 24.127 T 18-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_2432 da1a53e71f1906e9d214ad435dd10040 93 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 3.5E-21 T 18-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_2432 da1a53e71f1906e9d214ad435dd10040 93 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 3.5E-21 T 18-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_2432 da1a53e71f1906e9d214ad435dd10040 93 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 3.5E-21 T 18-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_2432 da1a53e71f1906e9d214ad435dd10040 93 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 89 6.3E-44 T 18-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 SHALO_2432 da1a53e71f1906e9d214ad435dd10040 93 PIRSF PIRSF002144 1 93 1.2E-31 T 18-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_2432 da1a53e71f1906e9d214ad435dd10040 93 Pfam PF00203 Ribosomal protein S19 3 83 1.2E-34 T 18-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_2432 da1a53e71f1906e9d214ad435dd10040 93 SUPERFAMILY SSF54570 3 84 3.79E-34 T 18-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_0094 4439b3ffc596513ef9aa18c284f76ead 478 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 394 427 1.3E-4 T 18-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 SHALO_0094 4439b3ffc596513ef9aa18c284f76ead 478 Pfam PF13424 Tetratricopeptide repeat 74 138 2.9E-11 T 18-10-2018 SHALO_0094 4439b3ffc596513ef9aa18c284f76ead 478 Gene3D G3DSA:3.40.50.2000 366 453 4.8E-7 T 18-10-2018 SHALO_0094 4439b3ffc596513ef9aa18c284f76ead 478 SUPERFAMILY SSF48452 48 223 2.85E-38 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SHALO_0094 4439b3ffc596513ef9aa18c284f76ead 478 SUPERFAMILY SSF53756 222 456 7.85E-20 T 18-10-2018 SHALO_0094 4439b3ffc596513ef9aa18c284f76ead 478 Pfam PF00515 Tetratricopeptide repeat 142 175 2.0E-9 T 18-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 SHALO_0094 4439b3ffc596513ef9aa18c284f76ead 478 Gene3D G3DSA:1.25.40.10 7 250 1.0E-46 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SHALO_0094 4439b3ffc596513ef9aa18c284f76ead 478 SMART SM00028 108 141 9.8E-6 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_0094 4439b3ffc596513ef9aa18c284f76ead 478 SMART SM00028 74 107 1.5E-6 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_0094 4439b3ffc596513ef9aa18c284f76ead 478 SMART SM00028 142 175 6.2E-8 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_0603 730e05c45fbb5f04206e32e2a2d8a669 166 Gene3D G3DSA:2.102.10.10 37 151 1.9E-23 T 18-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 SHALO_0603 730e05c45fbb5f04206e32e2a2d8a669 166 PRINTS PR00162 Rieske 2Fe-2S subunit signature 91 102 5.4E-7 T 18-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 SHALO_0603 730e05c45fbb5f04206e32e2a2d8a669 166 PRINTS PR00162 Rieske 2Fe-2S subunit signature 112 124 5.4E-7 T 18-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 SHALO_0603 730e05c45fbb5f04206e32e2a2d8a669 166 PRINTS PR00162 Rieske 2Fe-2S subunit signature 124 136 5.4E-7 T 18-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 SHALO_0603 730e05c45fbb5f04206e32e2a2d8a669 166 Pfam PF00355 Rieske [2Fe-2S] domain 57 139 7.0E-11 T 18-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 SHALO_0603 730e05c45fbb5f04206e32e2a2d8a669 166 SUPERFAMILY SSF50022 45 152 1.23E-23 T 18-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 SHALO_1970 177361108922207a2159ae57f7245de4 320 SUPERFAMILY SSF143865 1 259 7.72E-38 T 18-10-2018 SHALO_1970 177361108922207a2159ae57f7245de4 320 Gene3D G3DSA:1.20.58.340 244 320 3.2E-24 T 18-10-2018 SHALO_1970 177361108922207a2159ae57f7245de4 320 SUPERFAMILY SSF144083 255 318 1.44E-20 T 18-10-2018 SHALO_1970 177361108922207a2159ae57f7245de4 320 Gene3D G3DSA:3.30.460.20 5 130 2.4E-6 T 18-10-2018 SHALO_1970 177361108922207a2159ae57f7245de4 320 Pfam PF01544 CorA-like Mg2+ transporter protein 30 316 1.7E-55 T 18-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 SHALO_1970 177361108922207a2159ae57f7245de4 320 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 6 320 2.5E-71 T 18-10-2018 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 SHALO_1469 c27bfed87cbf05f67dbf076201774fd2 148 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 145 2.4E-40 T 18-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_1469 c27bfed87cbf05f67dbf076201774fd2 148 Gene3D G3DSA:3.40.5.10 1 52 1.0E-20 T 18-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_1469 c27bfed87cbf05f67dbf076201774fd2 148 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 18-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_1469 c27bfed87cbf05f67dbf076201774fd2 148 SUPERFAMILY SSF55653 57 147 1.57E-22 T 18-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily SHALO_1469 c27bfed87cbf05f67dbf076201774fd2 148 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 46 1.7E-19 T 18-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_1469 c27bfed87cbf05f67dbf076201774fd2 148 Pfam PF03948 Ribosomal protein L9, C-terminal domain 65 145 4.8E-23 T 18-10-2018 IPR020069 Ribosomal protein L9, C-terminal SHALO_1469 c27bfed87cbf05f67dbf076201774fd2 148 Gene3D G3DSA:3.10.430.100 60 147 7.8E-24 T 18-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily SHALO_1469 c27bfed87cbf05f67dbf076201774fd2 148 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 23.155 T 18-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_1469 c27bfed87cbf05f67dbf076201774fd2 148 SUPERFAMILY SSF55658 1 55 1.17E-16 T 18-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal SHALO_2761 21929a3fd1846f2e1ca6bd47dbde35ca 404 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 4 137 1.3E-32 T 18-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 SHALO_2761 21929a3fd1846f2e1ca6bd47dbde35ca 404 SUPERFAMILY SSF51735 2 187 3.31E-16 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_2761 21929a3fd1846f2e1ca6bd47dbde35ca 404 Gene3D G3DSA:3.30.360.10 151 347 2.5E-158 T 18-10-2018 SHALO_2761 21929a3fd1846f2e1ca6bd47dbde35ca 404 Gene3D G3DSA:3.40.50.720 5 390 2.5E-158 T 18-10-2018 SHALO_2761 21929a3fd1846f2e1ca6bd47dbde35ca 404 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 141 387 1.5E-37 T 18-10-2018 IPR032095 Saccharopine dehydrogenase, C-terminal Reactome: R-HSA-71064 SHALO_1864 06a50d12dc7c74e7c8869adca0b87c8e 315 SUPERFAMILY SSF161111 22 243 3.01E-51 T 18-10-2018 IPR027469 Cation efflux transmembrane domain superfamily SHALO_1864 06a50d12dc7c74e7c8869adca0b87c8e 315 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 24 297 3.6E-68 T 18-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SHALO_1864 06a50d12dc7c74e7c8869adca0b87c8e 315 Pfam PF01545 Cation efflux family 29 242 2.8E-42 T 18-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SHALO_1864 06a50d12dc7c74e7c8869adca0b87c8e 315 Gene3D G3DSA:1.20.1510.10 22 242 1.8E-30 T 18-10-2018 IPR027469 Cation efflux transmembrane domain superfamily SHALO_1912 d29d8933eeeaa8c672d74e09164dc5e8 537 Gene3D G3DSA:1.10.287.950 204 537 1.0E-55 T 18-10-2018 SHALO_1912 d29d8933eeeaa8c672d74e09164dc5e8 537 SUPERFAMILY SSF58104 226 536 2.96E-56 T 18-10-2018 SHALO_1912 d29d8933eeeaa8c672d74e09164dc5e8 537 SMART SM00283 273 535 8.2E-43 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_1912 d29d8933eeeaa8c672d74e09164dc5e8 537 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 351 450 3.5E-31 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_1389 0222c22d198550332d2bc1320365e063 125 Gene3D G3DSA:1.10.10.10 5 124 5.6E-34 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_1389 0222c22d198550332d2bc1320365e063 125 SUPERFAMILY SSF46785 5 105 8.59E-31 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SHALO_1389 0222c22d198550332d2bc1320365e063 125 Pfam PF01638 HxlR-like helix-turn-helix 21 105 7.5E-30 T 18-10-2018 IPR002577 Helix-turn-helix, HxlR type SHALO_0826 f0c5795f9d9207744f14858b1fb24466 299 Gene3D G3DSA:3.40.50.1820 26 288 2.5E-40 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold SHALO_0826 f0c5795f9d9207744f14858b1fb24466 299 Pfam PF07859 alpha/beta hydrolase fold 79 272 5.1E-12 T 18-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 SHALO_0826 f0c5795f9d9207744f14858b1fb24466 299 SUPERFAMILY SSF53474 58 266 7.83E-32 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold SHALO_1167 19981c64e493da71f40b5914cf3f2519 259 Pfam PF00145 C-5 cytosine-specific DNA methylase 35 103 6.2E-8 T 18-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 SHALO_1167 19981c64e493da71f40b5914cf3f2519 259 SUPERFAMILY SSF53335 5 212 3.05E-23 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_1167 19981c64e493da71f40b5914cf3f2519 259 Gene3D G3DSA:3.40.50.150 25 169 1.9E-14 T 18-10-2018 SHALO_2475 76d000ffb9818696780929351f15b54d 596 Gene3D G3DSA:3.60.21.10 105 399 2.4E-73 T 18-10-2018 IPR029052 Metallo-dependent phosphatase-like SHALO_2475 76d000ffb9818696780929351f15b54d 596 TIGRFAM TIGR04486 thiosulf_SoxB: thiosulfohydrolase SoxB 5 582 6.8E-243 T 18-10-2018 IPR030998 Thiosulfohydrolase SoxB SHALO_2475 76d000ffb9818696780929351f15b54d 596 PRINTS PR01607 Apyrase family signature 286 303 2.0E-11 T 18-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 SHALO_2475 76d000ffb9818696780929351f15b54d 596 PRINTS PR01607 Apyrase family signature 305 328 2.0E-11 T 18-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 SHALO_2475 76d000ffb9818696780929351f15b54d 596 PRINTS PR01607 Apyrase family signature 337 357 2.0E-11 T 18-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 SHALO_2475 76d000ffb9818696780929351f15b54d 596 PRINTS PR01607 Apyrase family signature 47 65 2.0E-11 T 18-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 SHALO_2475 76d000ffb9818696780929351f15b54d 596 SUPERFAMILY SSF55816 397 572 6.8E-29 T 18-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 SHALO_2475 76d000ffb9818696780929351f15b54d 596 SUPERFAMILY SSF56300 45 398 1.1E-73 T 18-10-2018 SHALO_2475 76d000ffb9818696780929351f15b54d 596 Pfam PF02872 5'-nucleotidase, C-terminal domain 401 546 7.4E-15 T 18-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 SHALO_2475 76d000ffb9818696780929351f15b54d 596 Gene3D G3DSA:3.90.780.10 400 586 3.6E-64 T 18-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 SHALO_2695 4f82a3aee64476fe5b611ebab68c04a2 614 PIRSF PIRSF000171 37 613 4.2E-39 T 18-10-2018 SHALO_2695 4f82a3aee64476fe5b611ebab68c04a2 614 Gene3D G3DSA:4.10.80.40 576 608 3.1E-6 T 18-10-2018 SHALO_2695 4f82a3aee64476fe5b611ebab68c04a2 614 Pfam PF00890 FAD binding domain 48 431 1.4E-94 T 18-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_2695 4f82a3aee64476fe5b611ebab68c04a2 614 Gene3D G3DSA:3.50.50.60 48 443 6.1E-136 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SHALO_2695 4f82a3aee64476fe5b611ebab68c04a2 614 SUPERFAMILY SSF51905 41 454 4.2E-64 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SHALO_2695 4f82a3aee64476fe5b611ebab68c04a2 614 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 48 614 1.8E-200 T 18-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_2695 4f82a3aee64476fe5b611ebab68c04a2 614 SUPERFAMILY SSF46977 484 614 3.92E-37 T 18-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_2695 4f82a3aee64476fe5b611ebab68c04a2 614 SUPERFAMILY SSF56425 270 389 4.19E-39 T 18-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_2695 4f82a3aee64476fe5b611ebab68c04a2 614 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 394 416 3.3E-5 T 18-10-2018 SHALO_2695 4f82a3aee64476fe5b611ebab68c04a2 614 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 49 68 3.3E-5 T 18-10-2018 SHALO_2695 4f82a3aee64476fe5b611ebab68c04a2 614 Gene3D G3DSA:3.90.700.10 280 395 6.1E-136 T 18-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_2695 4f82a3aee64476fe5b611ebab68c04a2 614 Pfam PF02910 Fumarate reductase flavoprotein C-term 488 614 3.8E-32 T 18-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_2695 4f82a3aee64476fe5b611ebab68c04a2 614 Gene3D G3DSA:1.20.58.100 458 575 8.1E-28 T 18-10-2018 SHALO_0944 fe3ebacdbf9d70a6f9d6cd77d3e6c8b9 548 SUPERFAMILY SSF81442 18 524 2.88E-165 T 18-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_0944 fe3ebacdbf9d70a6f9d6cd77d3e6c8b9 548 Gene3D G3DSA:1.20.210.10 8 527 1.9E-188 T 18-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_0944 fe3ebacdbf9d70a6f9d6cd77d3e6c8b9 548 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 250 304 - T 18-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_0944 fe3ebacdbf9d70a6f9d6cd77d3e6c8b9 548 PRINTS PR01165 Cytochrome c oxidase subunit I signature 353 371 2.1E-94 T 18-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_0944 fe3ebacdbf9d70a6f9d6cd77d3e6c8b9 548 PRINTS PR01165 Cytochrome c oxidase subunit I signature 381 400 2.1E-94 T 18-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_0944 fe3ebacdbf9d70a6f9d6cd77d3e6c8b9 548 PRINTS PR01165 Cytochrome c oxidase subunit I signature 96 120 2.1E-94 T 18-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_0944 fe3ebacdbf9d70a6f9d6cd77d3e6c8b9 548 PRINTS PR01165 Cytochrome c oxidase subunit I signature 168 186 2.1E-94 T 18-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_0944 fe3ebacdbf9d70a6f9d6cd77d3e6c8b9 548 PRINTS PR01165 Cytochrome c oxidase subunit I signature 21 46 2.1E-94 T 18-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_0944 fe3ebacdbf9d70a6f9d6cd77d3e6c8b9 548 PRINTS PR01165 Cytochrome c oxidase subunit I signature 139 151 2.1E-94 T 18-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_0944 fe3ebacdbf9d70a6f9d6cd77d3e6c8b9 548 PRINTS PR01165 Cytochrome c oxidase subunit I signature 248 269 2.1E-94 T 18-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_0944 fe3ebacdbf9d70a6f9d6cd77d3e6c8b9 548 PRINTS PR01165 Cytochrome c oxidase subunit I signature 68 91 2.1E-94 T 18-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_0944 fe3ebacdbf9d70a6f9d6cd77d3e6c8b9 548 PRINTS PR01165 Cytochrome c oxidase subunit I signature 431 452 2.1E-94 T 18-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_0944 fe3ebacdbf9d70a6f9d6cd77d3e6c8b9 548 PRINTS PR01165 Cytochrome c oxidase subunit I signature 197 216 2.1E-94 T 18-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_0944 fe3ebacdbf9d70a6f9d6cd77d3e6c8b9 548 PRINTS PR01165 Cytochrome c oxidase subunit I signature 294 309 2.1E-94 T 18-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_0944 fe3ebacdbf9d70a6f9d6cd77d3e6c8b9 548 PRINTS PR01165 Cytochrome c oxidase subunit I signature 318 339 2.1E-94 T 18-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_0944 fe3ebacdbf9d70a6f9d6cd77d3e6c8b9 548 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 30 473 4.0E-136 T 18-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_1405 1a73fda6f5d5a6f7b6e572d8cf28b2b1 739 Pfam PF01300 Telomere recombination 211 386 1.4E-51 T 18-10-2018 IPR006070 YrdC-like domain GO:0003725 SHALO_1405 1a73fda6f5d5a6f7b6e572d8cf28b2b1 739 TIGRFAM TIGR00143 hypF: carbamoyltransferase HypF 10 733 7.0E-240 T 18-10-2018 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 SHALO_1405 1a73fda6f5d5a6f7b6e572d8cf28b2b1 739 Pfam PF07503 HypF finger 109 142 6.6E-18 T 18-10-2018 IPR011125 Zinc finger, HypF-type GO:0008270 SHALO_1405 1a73fda6f5d5a6f7b6e572d8cf28b2b1 739 Pfam PF07503 HypF finger 159 191 2.1E-17 T 18-10-2018 IPR011125 Zinc finger, HypF-type GO:0008270 SHALO_1405 1a73fda6f5d5a6f7b6e572d8cf28b2b1 739 Pfam PF00708 Acylphosphatase 9 90 2.7E-16 T 18-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SHALO_1405 1a73fda6f5d5a6f7b6e572d8cf28b2b1 739 PIRSF PIRSF006256 2 739 9.6E-271 T 18-10-2018 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 SHALO_1405 1a73fda6f5d5a6f7b6e572d8cf28b2b1 739 ProSitePatterns PS00150 Acylphosphatase signature 1. 11 21 - T 18-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SHALO_1405 1a73fda6f5d5a6f7b6e572d8cf28b2b1 739 Gene3D G3DSA:3.30.420.350 486 722 6.6E-115 T 18-10-2018 SHALO_1405 1a73fda6f5d5a6f7b6e572d8cf28b2b1 739 Gene3D G3DSA:3.30.110.120 255 374 4.5E-145 T 18-10-2018 SHALO_1405 1a73fda6f5d5a6f7b6e572d8cf28b2b1 739 Gene3D G3DSA:3.30.420.360 387 733 6.6E-115 T 18-10-2018 SHALO_1405 1a73fda6f5d5a6f7b6e572d8cf28b2b1 739 SUPERFAMILY SSF54975 4 90 1.68E-19 T 18-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SHALO_1405 1a73fda6f5d5a6f7b6e572d8cf28b2b1 739 Gene3D G3DSA:3.90.870.50 10 365 4.5E-145 T 18-10-2018 SHALO_1405 1a73fda6f5d5a6f7b6e572d8cf28b2b1 739 SUPERFAMILY SSF55821 176 392 7.02E-46 T 18-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily SHALO_2274 a876f7c3fa908e842ec5480fd5d8f74e 312 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 4 141 4.0E-49 T 18-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 SHALO_2274 a876f7c3fa908e842ec5480fd5d8f74e 312 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 309 4.2E-138 T 18-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 SHALO_2274 a876f7c3fa908e842ec5480fd5d8f74e 312 Gene3D G3DSA:3.90.226.10 1 311 3.1E-103 T 18-10-2018 SHALO_2274 a876f7c3fa908e842ec5480fd5d8f74e 312 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 190 199 9.8E-45 T 18-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 SHALO_2274 a876f7c3fa908e842ec5480fd5d8f74e 312 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 106 124 9.8E-45 T 18-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 SHALO_2274 a876f7c3fa908e842ec5480fd5d8f74e 312 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 146 159 9.8E-45 T 18-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 SHALO_2274 a876f7c3fa908e842ec5480fd5d8f74e 312 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 81 92 9.8E-45 T 18-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 SHALO_2274 a876f7c3fa908e842ec5480fd5d8f74e 312 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 162 175 9.8E-45 T 18-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 SHALO_2274 a876f7c3fa908e842ec5480fd5d8f74e 312 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 127 143 9.8E-45 T 18-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 SHALO_2274 a876f7c3fa908e842ec5480fd5d8f74e 312 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 4 309 44.695 T 18-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 SHALO_2274 a876f7c3fa908e842ec5480fd5d8f74e 312 SUPERFAMILY SSF52096 30 309 1.29E-84 T 18-10-2018 IPR029045 ClpP/crotonase-like domain superfamily SHALO_0607 973caec08a6f7622ba28c6a683cd0a01 413 Gene3D G3DSA:3.40.50.300 1 211 6.1E-71 T 18-10-2018 SHALO_0607 973caec08a6f7622ba28c6a683cd0a01 413 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 18-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site SHALO_0607 973caec08a6f7622ba28c6a683cd0a01 413 SMART SM00490 259 340 1.1E-32 T 18-10-2018 IPR001650 Helicase, C-terminal SHALO_0607 973caec08a6f7622ba28c6a683cd0a01 413 Pfam PF00270 DEAD/DEAH box helicase 25 195 2.8E-47 T 18-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SHALO_0607 973caec08a6f7622ba28c6a683cd0a01 413 Pfam PF00271 Helicase conserved C-terminal domain 236 340 3.0E-27 T 18-10-2018 IPR001650 Helicase, C-terminal SHALO_0607 973caec08a6f7622ba28c6a683cd0a01 413 SMART SM00487 20 223 4.0E-55 T 18-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain SHALO_0607 973caec08a6f7622ba28c6a683cd0a01 413 Gene3D G3DSA:3.40.50.300 216 412 1.5E-47 T 18-10-2018 SHALO_0607 973caec08a6f7622ba28c6a683cd0a01 413 SUPERFAMILY SSF52540 74 360 1.6E-67 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_2365 92b3c4f515e59175fff594334dd584e4 390 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 143 387 1.8E-67 T 18-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 SHALO_2365 92b3c4f515e59175fff594334dd584e4 390 Gene3D G3DSA:1.10.3720.10 162 389 1.2E-32 T 18-10-2018 IPR035906 MetI-like superfamily SHALO_2365 92b3c4f515e59175fff594334dd584e4 390 SUPERFAMILY SSF161098 158 376 2.88E-35 T 18-10-2018 IPR035906 MetI-like superfamily SHALO_2365 92b3c4f515e59175fff594334dd584e4 390 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 188 386 1.4E-19 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 SHALO_2365 92b3c4f515e59175fff594334dd584e4 390 Pfam PF11812 Domain of unknown function (DUF3333) 82 131 9.8E-7 T 18-10-2018 IPR024573 Domain of unknown function DUF3333 SHALO_2365 92b3c4f515e59175fff594334dd584e4 390 Pfam PF11812 Domain of unknown function (DUF3333) 13 72 1.3E-13 T 18-10-2018 IPR024573 Domain of unknown function DUF3333 SHALO_0931 7374eaf26c700d2f7f27a653eac6ba20 303 SUPERFAMILY SSF51735 4 256 3.74E-18 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_0931 7374eaf26c700d2f7f27a653eac6ba20 303 Gene3D G3DSA:3.40.50.720 5 217 5.2E-28 T 18-10-2018 SHALO_0931 7374eaf26c700d2f7f27a653eac6ba20 303 Pfam PF05368 NmrA-like family 5 239 2.5E-15 T 18-10-2018 IPR008030 NmrA-like domain Reactome: R-HSA-70635 SHALO_0931 7374eaf26c700d2f7f27a653eac6ba20 303 Gene3D G3DSA:3.90.25.10 157 274 5.2E-28 T 18-10-2018 SHALO_1280 8aaa0b28c90c4089d7f01f5545187270 521 Pfam PF00795 Carbon-nitrogen hydrolase 228 489 8.6E-36 T 18-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 SHALO_1280 8aaa0b28c90c4089d7f01f5545187270 521 SUPERFAMILY SSF56317 225 496 3.01E-60 T 18-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily SHALO_1280 8aaa0b28c90c4089d7f01f5545187270 521 SUPERFAMILY SSF55729 10 144 2.23E-16 T 18-10-2018 IPR016181 Acyl-CoA N-acyltransferase SHALO_1280 8aaa0b28c90c4089d7f01f5545187270 521 Gene3D G3DSA:3.60.110.10 226 511 1.3E-59 T 18-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily SHALO_1280 8aaa0b28c90c4089d7f01f5545187270 521 Gene3D G3DSA:3.40.630.30 7 223 8.2E-52 T 18-10-2018 SHALO_1280 8aaa0b28c90c4089d7f01f5545187270 521 Pfam PF00583 Acetyltransferase (GNAT) family 49 142 1.7E-7 T 18-10-2018 IPR000182 GNAT domain SHALO_0930 07f06748b1c82f388096528cbe56b1ec 295 SUPERFAMILY SSF46689 239 288 4.48E-12 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SHALO_0930 07f06748b1c82f388096528cbe56b1ec 295 Gene3D G3DSA:1.10.10.60 182 291 1.8E-27 T 18-10-2018 SHALO_0930 07f06748b1c82f388096528cbe56b1ec 295 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 255 270 6.2E-7 T 18-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SHALO_0930 07f06748b1c82f388096528cbe56b1ec 295 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 270 286 6.2E-7 T 18-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SHALO_0930 07f06748b1c82f388096528cbe56b1ec 295 Pfam PF12833 Helix-turn-helix domain 209 286 2.5E-20 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_0930 07f06748b1c82f388096528cbe56b1ec 295 SMART SM00342 203 286 7.9E-27 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_0930 07f06748b1c82f388096528cbe56b1ec 295 Pfam PF06719 AraC-type transcriptional regulator N-terminus 24 172 1.2E-30 T 18-10-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal SHALO_0930 07f06748b1c82f388096528cbe56b1ec 295 SUPERFAMILY SSF46689 188 237 2.84E-8 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SHALO_0930 07f06748b1c82f388096528cbe56b1ec 295 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 240 282 - T 18-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 SHALO_2405 145d2dabe527d7ecd9d33af53cc7b4f8 121 Gene3D G3DSA:2.40.40.20 1 121 1.8E-51 T 18-10-2018 SHALO_2405 145d2dabe527d7ecd9d33af53cc7b4f8 121 SUPERFAMILY SSF50692 1 120 2.82E-48 T 18-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily SHALO_2405 145d2dabe527d7ecd9d33af53cc7b4f8 121 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 91 5.0E-36 T 18-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 SHALO_2405 145d2dabe527d7ecd9d33af53cc7b4f8 121 Pfam PF02261 Aspartate decarboxylase 1 114 3.9E-51 T 18-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 SHALO_2405 145d2dabe527d7ecd9d33af53cc7b4f8 121 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 117 3.3E-51 T 18-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 SHALO_2405 145d2dabe527d7ecd9d33af53cc7b4f8 121 PIRSF PIRSF006246 1 120 9.1E-51 T 18-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 SHALO_2405 145d2dabe527d7ecd9d33af53cc7b4f8 121 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 121 67.763 T 18-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 SHALO_1973 56d576faac9c06b56606f7c72bb7586d 459 Pfam PF02913 FAD linked oxidases, C-terminal domain 215 456 3.2E-65 T 18-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 SHALO_1973 56d576faac9c06b56606f7c72bb7586d 459 Gene3D G3DSA:3.30.465.40 4 234 5.2E-72 T 18-10-2018 SHALO_1973 56d576faac9c06b56606f7c72bb7586d 459 SUPERFAMILY SSF55103 220 458 7.85E-68 T 18-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 SHALO_1973 56d576faac9c06b56606f7c72bb7586d 459 Gene3D G3DSA:3.30.70.2740 335 417 2.4E-16 T 18-10-2018 SHALO_1973 56d576faac9c06b56606f7c72bb7586d 459 Gene3D G3DSA:1.10.45.10 418 457 1.8E-10 T 18-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 SHALO_1973 56d576faac9c06b56606f7c72bb7586d 459 Pfam PF01565 FAD binding domain 39 178 3.3E-42 T 18-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 SHALO_1973 56d576faac9c06b56606f7c72bb7586d 459 SUPERFAMILY SSF56176 6 216 4.35E-70 T 18-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 SHALO_2825 78b4aa7ccc59164292c7ba5cc47a9480 230 SUPERFAMILY SSF46689 8 79 1.85E-16 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SHALO_2825 78b4aa7ccc59164292c7ba5cc47a9480 230 Gene3D G3DSA:1.10.357.10 64 228 7.5E-31 T 18-10-2018 SHALO_2825 78b4aa7ccc59164292c7ba5cc47a9480 230 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 64 2.9E-14 T 18-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SHALO_2825 78b4aa7ccc59164292c7ba5cc47a9480 230 Gene3D G3DSA:1.10.10.60 2 63 1.6E-17 T 18-10-2018 SHALO_2825 78b4aa7ccc59164292c7ba5cc47a9480 230 Pfam PF09209 Domain of unknown function (DUF1956) 103 212 3.2E-16 T 18-10-2018 IPR015292 Transcription regulator YbiH, C-terminal SHALO_2825 78b4aa7ccc59164292c7ba5cc47a9480 230 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 4.4E-6 T 18-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SHALO_2825 78b4aa7ccc59164292c7ba5cc47a9480 230 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 4.4E-6 T 18-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SHALO_2825 78b4aa7ccc59164292c7ba5cc47a9480 230 SUPERFAMILY SSF48498 109 219 6.67E-16 T 18-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily SHALO_0153 1dafde18b05cd10b6ec0dc0371525a61 530 SUPERFAMILY SSF109604 333 519 2.63E-37 T 18-10-2018 SHALO_0153 1dafde18b05cd10b6ec0dc0371525a61 530 Gene3D G3DSA:1.10.3210.10 330 530 8.7E-70 T 18-10-2018 SHALO_0153 1dafde18b05cd10b6ec0dc0371525a61 530 Pfam PF01966 HD domain 356 478 3.3E-18 T 18-10-2018 IPR006674 HD domain SHALO_0153 1dafde18b05cd10b6ec0dc0371525a61 530 SMART SM00471 351 488 2.3E-7 T 18-10-2018 IPR003607 HD/PDEase domain SHALO_2295 294f5da645ec91e7c296646dc0116be7 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 161 227 4.4E-14 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_2295 294f5da645ec91e7c296646dc0116be7 230 Gene3D G3DSA:3.40.50.2300 8 130 1.6E-33 T 18-10-2018 SHALO_2295 294f5da645ec91e7c296646dc0116be7 230 SUPERFAMILY SSF46894 142 228 2.75E-15 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHALO_2295 294f5da645ec91e7c296646dc0116be7 230 Gene3D G3DSA:1.10.10.10 138 229 9.1E-18 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_2295 294f5da645ec91e7c296646dc0116be7 230 SMART SM00448 11 122 3.2E-32 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_2295 294f5da645ec91e7c296646dc0116be7 230 Pfam PF00072 Response regulator receiver domain 13 122 1.9E-26 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_2295 294f5da645ec91e7c296646dc0116be7 230 SUPERFAMILY SSF52172 10 171 2.13E-35 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_2295 294f5da645ec91e7c296646dc0116be7 230 SMART SM00862 157 227 1.2E-14 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_1684 9e2add052ae572a8c8ce4c98a3d75cbf 420 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 3 419 7.4E-166 T 18-10-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 SHALO_1684 9e2add052ae572a8c8ce4c98a3d75cbf 420 PIRSF PIRSF001434 1 420 5.7E-122 T 18-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 SHALO_1684 9e2add052ae572a8c8ce4c98a3d75cbf 420 SUPERFAMILY SSF53383 1 419 3.36E-105 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase SHALO_1684 9e2add052ae572a8c8ce4c98a3d75cbf 420 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 419 4.9E-129 T 18-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 SHALO_1684 9e2add052ae572a8c8ce4c98a3d75cbf 420 Gene3D G3DSA:3.40.640.10 1 284 1.3E-90 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 SHALO_1684 9e2add052ae572a8c8ce4c98a3d75cbf 420 Gene3D G3DSA:3.90.1150.10 285 420 2.9E-48 T 18-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 SHALO_1450 7ae7d6cb21bfb0c0b98b44f5aba05fa4 239 Pfam PF12697 Alpha/beta hydrolase family 28 152 3.9E-11 T 18-10-2018 IPR000073 Alpha/beta hydrolase fold-1 SHALO_1450 7ae7d6cb21bfb0c0b98b44f5aba05fa4 239 Gene3D G3DSA:3.40.50.1820 14 237 1.2E-27 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold SHALO_1450 7ae7d6cb21bfb0c0b98b44f5aba05fa4 239 SUPERFAMILY SSF53474 14 237 1.56E-29 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold SHALO_0329 d405d3e699d70a1a8567a2b477b34b03 299 Pfam PF12833 Helix-turn-helix domain 211 285 1.2E-20 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_0329 d405d3e699d70a1a8567a2b477b34b03 299 SMART SM00342 205 288 3.5E-25 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_0329 d405d3e699d70a1a8567a2b477b34b03 299 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 242 284 - T 18-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 SHALO_0329 d405d3e699d70a1a8567a2b477b34b03 299 Pfam PF06719 AraC-type transcriptional regulator N-terminus 26 176 7.4E-46 T 18-10-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal SHALO_0329 d405d3e699d70a1a8567a2b477b34b03 299 SUPERFAMILY SSF46689 241 286 1.84E-9 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SHALO_0329 d405d3e699d70a1a8567a2b477b34b03 299 Gene3D G3DSA:1.10.10.60 184 291 4.4E-28 T 18-10-2018 SHALO_0329 d405d3e699d70a1a8567a2b477b34b03 299 SUPERFAMILY SSF46689 189 239 2.69E-9 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SHALO_2661 3bb8cd239e138439ebab302277bc664a 262 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_2661 3bb8cd239e138439ebab302277bc664a 262 SUPERFAMILY SSF52540 5 222 8.8E-55 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_2661 3bb8cd239e138439ebab302277bc664a 262 Gene3D G3DSA:3.40.50.300 4 249 8.7E-57 T 18-10-2018 SHALO_2661 3bb8cd239e138439ebab302277bc664a 262 SMART SM00382 28 233 1.4E-8 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_2661 3bb8cd239e138439ebab302277bc664a 262 Pfam PF00005 ABC transporter 19 167 1.1E-29 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_1702 b052b52660186ff2e1a4240751c35245 199 Gene3D G3DSA:3.60.15.10 2 197 2.1E-47 T 18-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like SHALO_1702 b052b52660186ff2e1a4240751c35245 199 SMART SM00849 13 178 8.1E-34 T 18-10-2018 IPR001279 Metallo-beta-lactamase SHALO_1702 b052b52660186ff2e1a4240751c35245 199 SUPERFAMILY SSF56281 8 183 1.26E-44 T 18-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like SHALO_1702 b052b52660186ff2e1a4240751c35245 199 Pfam PF00753 Metallo-beta-lactamase superfamily 11 178 1.7E-24 T 18-10-2018 IPR001279 Metallo-beta-lactamase SHALO_2462 fafbc022c4fc0bba0d007ba0bc299fa1 340 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 2 340 39.109 T 18-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SHALO_2462 fafbc022c4fc0bba0d007ba0bc299fa1 340 Pfam PF01339 CheB methylesterase 157 335 4.6E-59 T 18-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SHALO_2462 fafbc022c4fc0bba0d007ba0bc299fa1 340 Gene3D G3DSA:3.40.50.180 146 340 3.6E-71 T 18-10-2018 IPR035909 Methylesterase CheB, C-terminal SHALO_2462 fafbc022c4fc0bba0d007ba0bc299fa1 340 PIRSF PIRSF000876 1 340 1.5E-129 T 18-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SHALO_2462 fafbc022c4fc0bba0d007ba0bc299fa1 340 SMART SM00448 2 125 2.7E-23 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_2462 fafbc022c4fc0bba0d007ba0bc299fa1 340 SUPERFAMILY SSF52172 1 108 4.98E-28 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_2462 fafbc022c4fc0bba0d007ba0bc299fa1 340 Gene3D G3DSA:3.40.50.2300 1 139 1.8E-30 T 18-10-2018 SHALO_2462 fafbc022c4fc0bba0d007ba0bc299fa1 340 Pfam PF00072 Response regulator receiver domain 4 107 7.4E-24 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_2462 fafbc022c4fc0bba0d007ba0bc299fa1 340 SUPERFAMILY SSF52738 152 338 1.83E-69 T 18-10-2018 IPR035909 Methylesterase CheB, C-terminal SHALO_0119 294eb11d3006e8a1433b572b82c611fc 562 Pfam PF02254 TrkA-N domain 278 396 7.1E-22 T 18-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SHALO_0119 294eb11d3006e8a1433b572b82c611fc 562 Pfam PF02254 TrkA-N domain 115 235 1.4E-13 T 18-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SHALO_0119 294eb11d3006e8a1433b572b82c611fc 562 SUPERFAMILY SSF81324 6 135 4.97E-11 T 18-10-2018 SHALO_0119 294eb11d3006e8a1433b572b82c611fc 562 SUPERFAMILY SSF51735 275 412 6.33E-25 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_0119 294eb11d3006e8a1433b572b82c611fc 562 SUPERFAMILY SSF51735 113 259 3.07E-18 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_0119 294eb11d3006e8a1433b572b82c611fc 562 Gene3D G3DSA:3.40.50.720 103 250 1.0E-21 T 18-10-2018 SHALO_0119 294eb11d3006e8a1433b572b82c611fc 562 Gene3D G3DSA:3.40.50.720 273 410 9.8E-26 T 18-10-2018 SHALO_0119 294eb11d3006e8a1433b572b82c611fc 562 Gene3D G3DSA:1.10.287.70 2 102 1.7E-5 T 18-10-2018 SHALO_1274 def5ca9d6bd5b9d6977a7a5c3632d3ce 552 Gene3D G3DSA:3.50.50.60 1 177 2.4E-16 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SHALO_1274 def5ca9d6bd5b9d6977a7a5c3632d3ce 552 Pfam PF00732 GMC oxidoreductase 7 297 9.4E-8 T 18-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 SHALO_1274 def5ca9d6bd5b9d6977a7a5c3632d3ce 552 SUPERFAMILY SSF51905 1 545 7.63E-51 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SHALO_1274 def5ca9d6bd5b9d6977a7a5c3632d3ce 552 Gene3D G3DSA:3.50.50.60 458 550 1.3E-11 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SHALO_1274 def5ca9d6bd5b9d6977a7a5c3632d3ce 552 Gene3D G3DSA:3.50.50.60 221 326 2.7E-8 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SHALO_1274 def5ca9d6bd5b9d6977a7a5c3632d3ce 552 Pfam PF05199 GMC oxidoreductase 417 537 1.7E-14 T 18-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 SHALO_0157 b5650282453f768fce2666cbfa2ca9bd 537 SUPERFAMILY SSF55874 369 506 7.99E-29 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_0157 b5650282453f768fce2666cbfa2ca9bd 537 SUPERFAMILY SSF47384 295 370 1.96E-8 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SHALO_0157 b5650282453f768fce2666cbfa2ca9bd 537 Gene3D G3DSA:3.30.565.10 371 532 1.1E-31 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_0157 b5650282453f768fce2666cbfa2ca9bd 537 Gene3D G3DSA:1.10.287.130 286 369 7.8E-11 T 18-10-2018 SHALO_0157 b5650282453f768fce2666cbfa2ca9bd 537 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 413 506 1.2E-16 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_0157 b5650282453f768fce2666cbfa2ca9bd 537 SMART SM00387 411 533 1.0E-21 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_0157 b5650282453f768fce2666cbfa2ca9bd 537 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 480 2.2E-8 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_0157 b5650282453f768fce2666cbfa2ca9bd 537 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 466 2.2E-8 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_0157 b5650282453f768fce2666cbfa2ca9bd 537 PRINTS PR00344 Bacterial sensor protein C-terminal signature 483 501 2.2E-8 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_0157 b5650282453f768fce2666cbfa2ca9bd 537 Pfam PF12729 Four helix bundle sensory module for signal transduction 16 70 3.6E-7 T 18-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain SHALO_2358 09481041a557badc6bc8ad25737ce69c 571 SUPERFAMILY SSF55729 307 447 7.21E-24 T 18-10-2018 IPR016181 Acyl-CoA N-acyltransferase SHALO_2358 09481041a557badc6bc8ad25737ce69c 571 SMART SM00563 82 199 6.6E-8 T 18-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 SHALO_2358 09481041a557badc6bc8ad25737ce69c 571 Gene3D G3DSA:3.40.630.30 313 451 1.8E-5 T 18-10-2018 SHALO_2358 09481041a557badc6bc8ad25737ce69c 571 Pfam PF01553 Acyltransferase 72 196 4.6E-11 T 18-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 SHALO_2358 09481041a557badc6bc8ad25737ce69c 571 Pfam PF13444 Acetyltransferase (GNAT) domain 325 426 1.1E-24 T 18-10-2018 SHALO_2358 09481041a557badc6bc8ad25737ce69c 571 SUPERFAMILY SSF69593 53 220 7.85E-14 T 18-10-2018 SHALO_1160 fabed71c0f85e88223257a3099b4f0f3 159 Gene3D G3DSA:3.90.960.10 2 159 4.5E-49 T 18-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 SHALO_1160 fabed71c0f85e88223257a3099b4f0f3 159 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 6 156 2.4E-52 T 18-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC SHALO_1160 fabed71c0f85e88223257a3099b4f0f3 159 Pfam PF04073 Aminoacyl-tRNA editing domain 33 145 5.3E-25 T 18-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 SHALO_1160 fabed71c0f85e88223257a3099b4f0f3 159 SUPERFAMILY SSF55826 6 156 1.83E-38 T 18-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 SHALO_1160 fabed71c0f85e88223257a3099b4f0f3 159 PIRSF PIRSF006181 1 159 7.8E-57 T 18-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC SHALO_2628 aa8760a54f0d29e1ce9045bbb96b5450 542 SUPERFAMILY SSF58104 233 541 1.96E-59 T 18-10-2018 SHALO_2628 aa8760a54f0d29e1ce9045bbb96b5450 542 SMART SM00283 280 541 1.6E-43 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_2628 aa8760a54f0d29e1ce9045bbb96b5450 542 Gene3D G3DSA:1.10.287.950 211 542 1.4E-61 T 18-10-2018 SHALO_2628 aa8760a54f0d29e1ce9045bbb96b5450 542 SMART SM00304 211 265 3.0E-8 T 18-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 SHALO_2628 aa8760a54f0d29e1ce9045bbb96b5450 542 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 349 450 5.3E-32 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_2947 bf50b905c90ad8202c63782c99f68ed8 416 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 14 406 2.4E-100 T 18-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 SHALO_2947 bf50b905c90ad8202c63782c99f68ed8 416 Pfam PF00860 Permease family 14 385 8.5E-79 T 18-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 SHALO_2947 bf50b905c90ad8202c63782c99f68ed8 416 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 330 350 - T 18-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 SHALO_1559 00709e2ebc5fd93da889aa71411f8ae7 852 PIRSF PIRSF036687 1 852 0.0 T 18-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 SHALO_1559 00709e2ebc5fd93da889aa71411f8ae7 852 ProSitePatterns PS01244 Aconitase family signature 2. 756 769 - T 18-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 SHALO_1559 00709e2ebc5fd93da889aa71411f8ae7 852 Gene3D G3DSA:3.30.499.10 674 852 6.8E-58 T 18-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 SHALO_1559 00709e2ebc5fd93da889aa71411f8ae7 852 Pfam PF11791 Aconitate B N-terminal domain 6 158 8.1E-63 T 18-10-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 SHALO_1559 00709e2ebc5fd93da889aa71411f8ae7 852 Gene3D G3DSA:3.40.1060.10 376 672 6.9E-143 T 18-10-2018 IPR015932 Aconitase, domain 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-1268020|Reactome: R-HSA-71403 SHALO_1559 00709e2ebc5fd93da889aa71411f8ae7 852 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 4 849 0.0 T 18-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 SHALO_1559 00709e2ebc5fd93da889aa71411f8ae7 852 Gene3D G3DSA:1.25.40.310 3 163 4.6E-60 T 18-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 SHALO_1559 00709e2ebc5fd93da889aa71411f8ae7 852 SUPERFAMILY SSF52016 164 362 5.1E-54 T 18-10-2018 SHALO_1559 00709e2ebc5fd93da889aa71411f8ae7 852 Gene3D G3DSA:3.20.19.10 164 351 1.3E-62 T 18-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 SHALO_1559 00709e2ebc5fd93da889aa71411f8ae7 852 SUPERFAMILY SSF74778 3 162 9.02E-60 T 18-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 SHALO_1559 00709e2ebc5fd93da889aa71411f8ae7 852 Pfam PF00330 Aconitase family (aconitate hydratase) 463 813 2.6E-43 T 18-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 SHALO_1559 00709e2ebc5fd93da889aa71411f8ae7 852 Pfam PF06434 Aconitate hydratase 2 N-terminus 170 372 3.2E-90 T 18-10-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 SHALO_1559 00709e2ebc5fd93da889aa71411f8ae7 852 Gene3D G3DSA:3.30.499.10 393 520 6.9E-143 T 18-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 SHALO_1559 00709e2ebc5fd93da889aa71411f8ae7 852 SUPERFAMILY SSF53732 369 848 2.09E-139 T 18-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 SHALO_0793 5afabfa18a11249842319046cc9e9441 604 SUPERFAMILY SSF51569 3 296 2.2E-55 T 18-10-2018 SHALO_0793 5afabfa18a11249842319046cc9e9441 604 SUPERFAMILY SSF89000 308 466 3.33E-37 T 18-10-2018 SHALO_0793 5afabfa18a11249842319046cc9e9441 604 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 561 578 - T 18-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 SHALO_0793 5afabfa18a11249842319046cc9e9441 604 Gene3D G3DSA:3.20.20.70 1 468 1.4E-91 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_0793 5afabfa18a11249842319046cc9e9441 604 Pfam PF00682 HMGL-like 7 280 4.5E-15 T 18-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 SHALO_0793 5afabfa18a11249842319046cc9e9441 604 Pfam PF00364 Biotin-requiring enzyme 539 604 3.5E-19 T 18-10-2018 IPR000089 Biotin/lipoyl attachment SHALO_0793 5afabfa18a11249842319046cc9e9441 604 Gene3D G3DSA:2.40.50.100 530 604 8.1E-23 T 18-10-2018 SHALO_0793 5afabfa18a11249842319046cc9e9441 604 SUPERFAMILY SSF51230 531 604 1.23E-20 T 18-10-2018 IPR011053 Single hybrid motif SHALO_0793 5afabfa18a11249842319046cc9e9441 604 Pfam PF02436 Conserved carboxylase domain 307 495 7.6E-42 T 18-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 SHALO_1333 4247130cb7b511a38f7702f14f3e86c3 246 Pfam PF12706 Beta-lactamase superfamily domain 49 217 6.1E-21 T 18-10-2018 IPR001279 Metallo-beta-lactamase SHALO_1333 4247130cb7b511a38f7702f14f3e86c3 246 SMART SM00849 36 217 0.0047 T 18-10-2018 IPR001279 Metallo-beta-lactamase SHALO_1333 4247130cb7b511a38f7702f14f3e86c3 246 SUPERFAMILY SSF56281 2 226 3.54E-36 T 18-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like SHALO_1333 4247130cb7b511a38f7702f14f3e86c3 246 Gene3D G3DSA:3.60.15.10 1 245 2.9E-53 T 18-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like SHALO_1741 da1e2d5ef82459e3e767a7e64eb43093 410 SUPERFAMILY SSF55874 274 398 1.96E-16 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_1741 da1e2d5ef82459e3e767a7e64eb43093 410 Pfam PF00672 HAMP domain 159 203 3.3E-9 T 18-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 SHALO_1741 da1e2d5ef82459e3e767a7e64eb43093 410 SMART SM00387 308 409 7.7E-8 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_1741 da1e2d5ef82459e3e767a7e64eb43093 410 SMART SM00388 209 267 4.4E-6 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_1741 da1e2d5ef82459e3e767a7e64eb43093 410 Gene3D G3DSA:3.30.565.10 264 406 3.5E-13 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_1741 da1e2d5ef82459e3e767a7e64eb43093 410 SUPERFAMILY SSF47384 193 267 3.14E-8 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SHALO_1741 da1e2d5ef82459e3e767a7e64eb43093 410 Gene3D G3DSA:1.10.287.130 156 260 2.0E-19 T 18-10-2018 SHALO_1741 da1e2d5ef82459e3e767a7e64eb43093 410 SUPERFAMILY SSF158472 159 205 9.15E-8 T 18-10-2018 SHALO_1741 da1e2d5ef82459e3e767a7e64eb43093 410 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 313 396 1.6E-5 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_1741 da1e2d5ef82459e3e767a7e64eb43093 410 SMART SM00304 156 208 5.6E-7 T 18-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 SHALO_1332 124a1576926d5a8f81bc542154aab21a 367 Gene3D G3DSA:1.10.287.950 12 266 3.5E-48 T 18-10-2018 SHALO_1332 124a1576926d5a8f81bc542154aab21a 367 SUPERFAMILY SSF58104 23 274 3.27E-50 T 18-10-2018 SHALO_1332 124a1576926d5a8f81bc542154aab21a 367 SMART SM00283 43 266 7.4E-20 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_1332 124a1576926d5a8f81bc542154aab21a 367 Pfam PF13682 Chemoreceptor zinc-binding domain 260 323 6.7E-10 T 18-10-2018 IPR025991 Chemoreceptor zinc-binding domain SHALO_1332 124a1576926d5a8f81bc542154aab21a 367 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 125 249 2.2E-33 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_0975 7109a823221e39a7863007fef11a1a12 284 SUPERFAMILY SSF46626 160 267 2.63E-16 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_0975 7109a823221e39a7863007fef11a1a12 284 Gene3D G3DSA:1.10.760.10 50 155 4.4E-16 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_0975 7109a823221e39a7863007fef11a1a12 284 Gene3D G3DSA:1.10.760.10 156 247 1.1E-10 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_0975 7109a823221e39a7863007fef11a1a12 284 Pfam PF00034 Cytochrome c 53 151 2.4E-12 T 18-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_0975 7109a823221e39a7863007fef11a1a12 284 PIRSF PIRSF019225 41 158 1.6E-36 T 18-10-2018 IPR021195 Ubiquinol cytochrome c reductase, cytochrome c1 subunit, predicted SHALO_0975 7109a823221e39a7863007fef11a1a12 284 PIRSF PIRSF019225 153 284 1.2E-55 T 18-10-2018 IPR021195 Ubiquinol cytochrome c reductase, cytochrome c1 subunit, predicted SHALO_0975 7109a823221e39a7863007fef11a1a12 284 PIRSF PIRSF019225 1 53 2.3E-18 T 18-10-2018 IPR021195 Ubiquinol cytochrome c reductase, cytochrome c1 subunit, predicted SHALO_0975 7109a823221e39a7863007fef11a1a12 284 SUPERFAMILY SSF46626 29 150 3.69E-19 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_1233 2e6c56040fae516771cb734453bc465f 295 SMART SM00880 20 270 1.8E-23 T 18-10-2018 IPR007899 CHAD domain SHALO_1233 2e6c56040fae516771cb734453bc465f 295 Pfam PF05235 CHAD domain 21 240 1.9E-29 T 18-10-2018 IPR007899 CHAD domain SHALO_1233 2e6c56040fae516771cb734453bc465f 295 Gene3D G3DSA:1.40.20.10 3 294 1.2E-40 T 18-10-2018 IPR038186 CHAD domain superfamily SHALO_0616 342b8789ac74d250a96a49d3a13cfaad 532 SMART SM00387 411 523 7.4E-19 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_0616 342b8789ac74d250a96a49d3a13cfaad 532 SUPERFAMILY SSF47384 297 366 3.92E-5 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SHALO_0616 342b8789ac74d250a96a49d3a13cfaad 532 Gene3D G3DSA:1.10.287.130 286 368 1.8E-9 T 18-10-2018 SHALO_0616 342b8789ac74d250a96a49d3a13cfaad 532 Gene3D G3DSA:3.30.450.20 50 211 2.6E-32 T 18-10-2018 SHALO_0616 342b8789ac74d250a96a49d3a13cfaad 532 SMART SM01049 48 154 1.7E-4 T 18-10-2018 IPR033480 Single Cache domain 2 SHALO_0616 342b8789ac74d250a96a49d3a13cfaad 532 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 415 520 1.1E-18 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_0616 342b8789ac74d250a96a49d3a13cfaad 532 Gene3D G3DSA:3.30.565.10 371 522 7.1E-35 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_0616 342b8789ac74d250a96a49d3a13cfaad 532 PRINTS PR00344 Bacterial sensor protein C-terminal signature 507 520 5.9E-9 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_0616 342b8789ac74d250a96a49d3a13cfaad 532 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 480 5.9E-9 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_0616 342b8789ac74d250a96a49d3a13cfaad 532 PRINTS PR00344 Bacterial sensor protein C-terminal signature 483 501 5.9E-9 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_0616 342b8789ac74d250a96a49d3a13cfaad 532 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 466 5.9E-9 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_0616 342b8789ac74d250a96a49d3a13cfaad 532 SUPERFAMILY SSF55874 370 519 4.06E-30 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_0616 342b8789ac74d250a96a49d3a13cfaad 532 Pfam PF08269 Cache domain 86 207 6.9E-21 T 18-10-2018 IPR004010 Double Cache domain 2 SHALO_0333 4198e5e2851814b80e176e60823fd96d 286 SUPERFAMILY SSF56300 1 269 1.22E-19 T 18-10-2018 SHALO_0333 4198e5e2851814b80e176e60823fd96d 286 Pfam PF00149 Calcineurin-like phosphoesterase 1 254 2.1E-9 T 18-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 SHALO_0376 c5441800a4d38fab8de7bff639619da9 342 Pfam PF00557 Metallopeptidase family M24 121 334 1.2E-59 T 18-10-2018 IPR000994 Peptidase M24 SHALO_0376 c5441800a4d38fab8de7bff639619da9 342 Gene3D G3DSA:3.90.230.10 111 342 6.8E-70 T 18-10-2018 SHALO_0376 c5441800a4d38fab8de7bff639619da9 342 SUPERFAMILY SSF53092 4 98 3.66E-5 T 18-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal SHALO_0376 c5441800a4d38fab8de7bff639619da9 342 Gene3D G3DSA:3.40.350.10 2 110 2.4E-12 T 18-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal SHALO_0376 c5441800a4d38fab8de7bff639619da9 342 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 281 293 - T 18-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site SHALO_0376 c5441800a4d38fab8de7bff639619da9 342 SUPERFAMILY SSF55920 71 341 4.84E-66 T 18-10-2018 IPR036005 Creatinase/aminopeptidase-like SHALO_2533 e0e827e21335aa821bfc570684d47c41 411 PRINTS PR01035 Tetracycline resistance protein signature 137 159 1.9E-5 T 18-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 SHALO_2533 e0e827e21335aa821bfc570684d47c41 411 PRINTS PR01035 Tetracycline resistance protein signature 252 272 1.9E-5 T 18-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 SHALO_2533 e0e827e21335aa821bfc570684d47c41 411 PRINTS PR01035 Tetracycline resistance protein signature 47 66 1.9E-5 T 18-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 SHALO_2533 e0e827e21335aa821bfc570684d47c41 411 PRINTS PR01035 Tetracycline resistance protein signature 19 35 1.9E-5 T 18-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 SHALO_2533 e0e827e21335aa821bfc570684d47c41 411 Pfam PF07690 Major Facilitator Superfamily 17 337 1.6E-26 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SHALO_2533 e0e827e21335aa821bfc570684d47c41 411 Gene3D G3DSA:1.20.1250.20 216 397 4.6E-13 T 18-10-2018 SHALO_2533 e0e827e21335aa821bfc570684d47c41 411 Gene3D G3DSA:1.20.1250.20 7 197 8.6E-12 T 18-10-2018 SHALO_2533 e0e827e21335aa821bfc570684d47c41 411 SUPERFAMILY SSF103473 12 396 1.7E-36 T 18-10-2018 IPR036259 MFS transporter superfamily SHALO_1890 a8db249fab7eb468e96cc2ebda8a5f28 683 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 4 681 9.3E-210 T 18-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SHALO_1890 a8db249fab7eb468e96cc2ebda8a5f28 683 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 2 681 22.423 T 18-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SHALO_1890 a8db249fab7eb468e96cc2ebda8a5f28 683 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 5 548 2.3E-172 T 18-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SHALO_1890 a8db249fab7eb468e96cc2ebda8a5f28 683 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 6 19 1.1E-30 T 18-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SHALO_1890 a8db249fab7eb468e96cc2ebda8a5f28 683 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 48 60 1.1E-30 T 18-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SHALO_1890 a8db249fab7eb468e96cc2ebda8a5f28 683 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 400 419 1.1E-30 T 18-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SHALO_1890 a8db249fab7eb468e96cc2ebda8a5f28 683 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 242 257 1.1E-30 T 18-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SHALO_1890 a8db249fab7eb468e96cc2ebda8a5f28 683 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 313 329 1.1E-30 T 18-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SHALO_0812 556c12ee6325a7a1f5de0ffff3648afd 189 SUPERFAMILY SSF52317 2 180 1.56E-44 T 18-10-2018 IPR029062 Class I glutamine amidotransferase-like SHALO_0812 556c12ee6325a7a1f5de0ffff3648afd 189 Pfam PF01965 DJ-1/PfpI family 3 163 1.8E-41 T 18-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 SHALO_0812 556c12ee6325a7a1f5de0ffff3648afd 189 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 3 176 3.6E-60 T 18-10-2018 IPR006287 Protein/nucleic acid deglycase DJ-1 Reactome: R-HSA-3899300 SHALO_0812 556c12ee6325a7a1f5de0ffff3648afd 189 Gene3D G3DSA:3.40.50.880 1 185 4.4E-49 T 18-10-2018 IPR029062 Class I glutamine amidotransferase-like SHALO_1897 785c3f6536f5e652d4be2bfb4a9361ff 233 Gene3D G3DSA:3.30.110.170 31 211 1.7E-9 T 18-10-2018 SHALO_1897 785c3f6536f5e652d4be2bfb4a9361ff 233 Gene3D G3DSA:3.30.70.2970 33 141 1.7E-9 T 18-10-2018 SHALO_1897 785c3f6536f5e652d4be2bfb4a9361ff 233 Pfam PF04402 Protein of unknown function (DUF541) 26 226 2.3E-10 T 18-10-2018 IPR007497 Protein of unknown function DUF541 SHALO_2895 5270ba7e25f62242c73d43dbaf761e0f 425 Gene3D G3DSA:3.40.50.10380 2 160 6.4E-71 T 18-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 SHALO_2895 5270ba7e25f62242c73d43dbaf761e0f 425 Pfam PF00390 Malic enzyme, N-terminal domain 20 114 2.6E-23 T 18-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 SHALO_2895 5270ba7e25f62242c73d43dbaf761e0f 425 SUPERFAMILY SSF51735 163 421 3.65E-84 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_2895 5270ba7e25f62242c73d43dbaf761e0f 425 PIRSF PIRSF000106 15 424 3.1E-73 T 18-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 SHALO_2895 5270ba7e25f62242c73d43dbaf761e0f 425 Pfam PF03949 Malic enzyme, NAD binding domain 165 355 2.2E-23 T 18-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 SHALO_2895 5270ba7e25f62242c73d43dbaf761e0f 425 SMART SM01274 18 151 1.5E-81 T 18-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 SHALO_2895 5270ba7e25f62242c73d43dbaf761e0f 425 SMART SM00919 163 397 6.0E-141 T 18-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 SHALO_2895 5270ba7e25f62242c73d43dbaf761e0f 425 Gene3D G3DSA:3.40.50.720 161 425 1.1E-83 T 18-10-2018 SHALO_2895 5270ba7e25f62242c73d43dbaf761e0f 425 SUPERFAMILY SSF53223 12 161 1.01E-53 T 18-10-2018 SHALO_1146 2272a0662ed0be400dee74306d13226a 491 Gene3D G3DSA:3.30.1370.10 179 271 1.9E-8 T 18-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 SHALO_1146 2272a0662ed0be400dee74306d13226a 491 Hamap MF_00335 Ribonuclease Y [rny]. 1 491 22.022 T 18-10-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 SHALO_1146 2272a0662ed0be400dee74306d13226a 491 SUPERFAMILY SSF109604 284 443 3.37E-29 T 18-10-2018 SHALO_1146 2272a0662ed0be400dee74306d13226a 491 SUPERFAMILY SSF54791 180 276 7.59E-13 T 18-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 SHALO_1146 2272a0662ed0be400dee74306d13226a 491 Pfam PF00013 KH domain 191 236 8.9E-5 T 18-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 SHALO_1146 2272a0662ed0be400dee74306d13226a 491 TIGRFAM TIGR03319 RNase_Y: ribonuclease Y 5 491 6.3E-177 T 18-10-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 SHALO_1146 2272a0662ed0be400dee74306d13226a 491 TIGRFAM TIGR00277 HDIG: HDIG domain 303 380 3.0E-22 T 18-10-2018 IPR006675 HDIG domain SHALO_1146 2272a0662ed0be400dee74306d13226a 491 SMART SM00322 179 246 0.0092 T 18-10-2018 IPR004087 K Homology domain GO:0003676 SHALO_1146 2272a0662ed0be400dee74306d13226a 491 Gene3D G3DSA:1.10.3210.10 281 433 3.7E-16 T 18-10-2018 SHALO_1146 2272a0662ed0be400dee74306d13226a 491 Pfam PF12072 Domain of unknown function (DUF3552) 5 175 3.6E-10 T 18-10-2018 IPR022711 Ribonuclease Y, N-terminal SHALO_1146 2272a0662ed0be400dee74306d13226a 491 Pfam PF01966 HD domain 309 399 2.4E-17 T 18-10-2018 IPR006674 HD domain SHALO_1146 2272a0662ed0be400dee74306d13226a 491 SMART SM00471 303 409 3.6E-12 T 18-10-2018 IPR003607 HD/PDEase domain SHALO_1805 fc5d74116175bf56cb708bdab2a5ad75 510 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 1 510 38.965 T 18-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 SHALO_1805 fc5d74116175bf56cb708bdab2a5ad75 510 PIRSF PIRSF000414 1 510 2.1E-191 T 18-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 SHALO_1805 fc5d74116175bf56cb708bdab2a5ad75 510 Pfam PF01808 AICARFT/IMPCHase bienzyme 131 441 2.1E-95 T 18-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 SHALO_1805 fc5d74116175bf56cb708bdab2a5ad75 510 Gene3D G3DSA:3.40.50.1380 1 193 1.5E-82 T 18-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily SHALO_1805 fc5d74116175bf56cb708bdab2a5ad75 510 SMART SM00798 131 442 1.8E-144 T 18-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 SHALO_1805 fc5d74116175bf56cb708bdab2a5ad75 510 Pfam PF02142 MGS-like domain 12 125 2.2E-25 T 18-10-2018 IPR011607 Methylglyoxal synthase-like domain SHALO_1805 fc5d74116175bf56cb708bdab2a5ad75 510 SUPERFAMILY SSF53927 203 510 6.42E-107 T 18-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 SHALO_1805 fc5d74116175bf56cb708bdab2a5ad75 510 Gene3D G3DSA:3.40.140.20 199 353 1.2E-55 T 18-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 SHALO_1805 fc5d74116175bf56cb708bdab2a5ad75 510 SUPERFAMILY SSF52335 2 190 6.15E-66 T 18-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily SHALO_1805 fc5d74116175bf56cb708bdab2a5ad75 510 SMART SM00851 12 126 3.0E-52 T 18-10-2018 IPR011607 Methylglyoxal synthase-like domain SHALO_1805 fc5d74116175bf56cb708bdab2a5ad75 510 Gene3D G3DSA:3.40.140.20 372 510 1.9E-53 T 18-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 SHALO_1805 fc5d74116175bf56cb708bdab2a5ad75 510 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 2 510 4.7E-169 T 18-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 SHALO_0978 385ad0ef725964a07e9b1a0eb44de700 647 Gene3D G3DSA:3.20.20.450 408 647 2.8E-67 T 18-10-2018 IPR035919 EAL domain superfamily SHALO_0978 385ad0ef725964a07e9b1a0eb44de700 647 SUPERFAMILY SSF55785 142 246 2.09E-28 T 18-10-2018 IPR035965 PAS domain superfamily SHALO_0978 385ad0ef725964a07e9b1a0eb44de700 647 Pfam PF00072 Response regulator receiver domain 4 114 1.0E-22 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_0978 385ad0ef725964a07e9b1a0eb44de700 647 SUPERFAMILY SSF141868 414 644 1.96E-66 T 18-10-2018 IPR035919 EAL domain superfamily SHALO_0978 385ad0ef725964a07e9b1a0eb44de700 647 Gene3D G3DSA:3.40.50.2300 1 129 1.6E-29 T 18-10-2018 SHALO_0978 385ad0ef725964a07e9b1a0eb44de700 647 SMART SM00052 408 645 1.8E-54 T 18-10-2018 IPR001633 EAL domain SHALO_0978 385ad0ef725964a07e9b1a0eb44de700 647 SUPERFAMILY SSF52172 1 134 1.27E-30 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_0978 385ad0ef725964a07e9b1a0eb44de700 647 Pfam PF00563 EAL domain 415 644 1.1E-58 T 18-10-2018 IPR001633 EAL domain SHALO_0978 385ad0ef725964a07e9b1a0eb44de700 647 SMART SM00448 1 114 3.9E-27 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_0978 385ad0ef725964a07e9b1a0eb44de700 647 SMART SM00086 207 249 5.4E-6 T 18-10-2018 IPR001610 PAC motif SHALO_0978 385ad0ef725964a07e9b1a0eb44de700 647 Pfam PF08447 PAS fold 157 241 4.3E-16 T 18-10-2018 IPR013655 PAS fold-3 GO:0005515 SHALO_0978 385ad0ef725964a07e9b1a0eb44de700 647 Gene3D G3DSA:3.30.450.20 130 265 2.9E-28 T 18-10-2018 SHALO_0978 385ad0ef725964a07e9b1a0eb44de700 647 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 135 249 1.1E-17 T 18-10-2018 IPR000014 PAS domain SHALO_0978 385ad0ef725964a07e9b1a0eb44de700 647 SMART SM00091 134 200 7.1E-4 T 18-10-2018 IPR000014 PAS domain SHALO_1969 40865b0c5550fc9b910a48075df1a217 189 Gene3D G3DSA:3.90.79.10 40 189 1.8E-51 T 18-10-2018 SHALO_1969 40865b0c5550fc9b910a48075df1a217 189 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 10 182 6.6E-44 T 18-10-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 SHALO_1969 40865b0c5550fc9b910a48075df1a217 189 SUPERFAMILY SSF55811 6 183 1.14E-37 T 18-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 SHALO_2048 39efd7e40d70a65a4cf534df30f629a8 363 SUPERFAMILY SSF53383 3 360 2.5E-70 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase SHALO_2048 39efd7e40d70a65a4cf534df30f629a8 363 Gene3D G3DSA:3.40.640.10 39 273 5.1E-83 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 SHALO_2048 39efd7e40d70a65a4cf534df30f629a8 363 Pfam PF00155 Aminotransferase class I and II 25 356 3.8E-34 T 18-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SHALO_2048 39efd7e40d70a65a4cf534df30f629a8 363 Gene3D G3DSA:3.90.1150.10 28 340 5.1E-83 T 18-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 SHALO_2048 39efd7e40d70a65a4cf534df30f629a8 363 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 220 229 - T 18-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 SHALO_0015 380618f87f61d5c4e1b91610cd80e9bf 204 Gene3D G3DSA:3.20.130.10 1 177 2.0E-63 T 18-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 SHALO_0015 380618f87f61d5c4e1b91610cd80e9bf 204 Pfam PF05683 Fumarase C-terminus 8 176 9.2E-40 T 18-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 SHALO_0015 380618f87f61d5c4e1b91610cd80e9bf 204 SUPERFAMILY SSF117457 3 176 9.94E-54 T 18-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 SHALO_0015 380618f87f61d5c4e1b91610cd80e9bf 204 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 12 176 1.8E-60 T 18-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 SHALO_0848 253f03cd3ef4e45cff5dad1db5ca93a2 408 SUPERFAMILY SSF51261 236 405 1.05E-19 T 18-10-2018 IPR011055 Duplicated hybrid motif SHALO_0848 253f03cd3ef4e45cff5dad1db5ca93a2 408 Gene3D G3DSA:2.70.70.10 286 407 2.4E-17 T 18-10-2018 IPR011055 Duplicated hybrid motif SHALO_0848 253f03cd3ef4e45cff5dad1db5ca93a2 408 Pfam PF01551 Peptidase family M23 321 389 5.3E-15 T 18-10-2018 IPR016047 Peptidase M23 SHALO_0768 9aaa967bcb983417698f58034779ea3a 423 Gene3D G3DSA:3.40.50.20 1 91 1.8E-27 T 18-10-2018 SHALO_0768 9aaa967bcb983417698f58034779ea3a 423 SUPERFAMILY SSF51246 323 420 7.46E-24 T 18-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 SHALO_0768 9aaa967bcb983417698f58034779ea3a 423 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 99 291 8.4E-76 T 18-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 SHALO_0768 9aaa967bcb983417698f58034779ea3a 423 SMART SM01209 99 291 1.5E-123 T 18-10-2018 SHALO_0768 9aaa967bcb983417698f58034779ea3a 423 Gene3D G3DSA:3.30.470.20 187 324 3.6E-52 T 18-10-2018 SHALO_0768 9aaa967bcb983417698f58034779ea3a 423 Gene3D G3DSA:3.30.1490.20 117 186 2.0E-24 T 18-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 SHALO_0768 9aaa967bcb983417698f58034779ea3a 423 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 420 1.8E-147 T 18-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 SHALO_0768 9aaa967bcb983417698f58034779ea3a 423 SUPERFAMILY SSF56059 100 318 6.19E-58 T 18-10-2018 SHALO_0768 9aaa967bcb983417698f58034779ea3a 423 Gene3D G3DSA:3.90.600.10 325 423 9.2E-23 T 18-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 SHALO_0768 9aaa967bcb983417698f58034779ea3a 423 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 98 8.3E-30 T 18-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 SHALO_0768 9aaa967bcb983417698f58034779ea3a 423 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 285 292 - T 18-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 SHALO_0768 9aaa967bcb983417698f58034779ea3a 423 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 326 417 2.4E-18 T 18-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 SHALO_0768 9aaa967bcb983417698f58034779ea3a 423 SUPERFAMILY SSF52440 1 99 2.73E-28 T 18-10-2018 IPR016185 Pre-ATP-grasp domain superfamily SHALO_0768 9aaa967bcb983417698f58034779ea3a 423 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 420 39.197 T 18-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 SHALO_0768 9aaa967bcb983417698f58034779ea3a 423 SMART SM01210 325 420 6.9E-33 T 18-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 SHALO_2094 1a783918583f77d03be8eae2229c6b83 98 PIRSF PIRSF002736 2 98 3.9E-32 T 18-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 SHALO_2094 1a783918583f77d03be8eae2229c6b83 98 TIGRFAM TIGR01608 citD: citrate lyase acyl carrier protein 7 95 7.9E-29 T 18-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 SHALO_2094 1a783918583f77d03be8eae2229c6b83 98 ProDom PD015389 LYASE CITRATE ACYL CARRIER GAMMA CHAIN CITD PRECURSOR SIGNAL DIRECT 6 81 4.0E-10 T 18-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 SHALO_2094 1a783918583f77d03be8eae2229c6b83 98 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 6 87 1.2E-27 T 18-10-2018 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein SHALO_2094 1a783918583f77d03be8eae2229c6b83 98 Hamap MF_00805 Citrate lyase acyl carrier protein [citD]. 2 98 21.818 T 18-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 SHALO_0114 fd0c47c17421bde4af1ba5c5441c3368 201 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 4 195 25.282 T 18-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 SHALO_0114 fd0c47c17421bde4af1ba5c5441c3368 201 SUPERFAMILY SSF52540 7 191 2.09E-35 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0114 fd0c47c17421bde4af1ba5c5441c3368 201 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 7 186 1.2E-48 T 18-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 SHALO_0114 fd0c47c17421bde4af1ba5c5441c3368 201 Gene3D G3DSA:3.40.50.300 2 194 4.1E-59 T 18-10-2018 SHALO_0114 fd0c47c17421bde4af1ba5c5441c3368 201 Pfam PF01121 Dephospho-CoA kinase 7 175 4.9E-47 T 18-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 SHALO_1262 66dfccce79aa01b2233f5d28add06c69 135 SUPERFAMILY SSF55298 5 134 1.73E-24 T 18-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 SHALO_1262 66dfccce79aa01b2233f5d28add06c69 135 Gene3D G3DSA:3.30.1330.40 3 134 1.2E-25 T 18-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 SHALO_1262 66dfccce79aa01b2233f5d28add06c69 135 Pfam PF01042 Endoribonuclease L-PSP 20 131 1.7E-17 T 18-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 SHALO_2606 d5a386a6fb2b18f67b4bd9048801d422 634 PRINTS PR00344 Bacterial sensor protein C-terminal signature 618 631 3.4E-9 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_2606 d5a386a6fb2b18f67b4bd9048801d422 634 PRINTS PR00344 Bacterial sensor protein C-terminal signature 583 593 3.4E-9 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_2606 d5a386a6fb2b18f67b4bd9048801d422 634 PRINTS PR00344 Bacterial sensor protein C-terminal signature 565 579 3.4E-9 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_2606 d5a386a6fb2b18f67b4bd9048801d422 634 PRINTS PR00344 Bacterial sensor protein C-terminal signature 594 612 3.4E-9 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_2606 d5a386a6fb2b18f67b4bd9048801d422 634 SUPERFAMILY SSF47384 405 472 7.26E-8 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SHALO_2606 d5a386a6fb2b18f67b4bd9048801d422 634 Pfam PF04392 ABC transporter substrate binding protein 102 303 2.8E-6 T 18-10-2018 IPR007487 ABC transporter, substrate-binding protein SHALO_2606 d5a386a6fb2b18f67b4bd9048801d422 634 Gene3D G3DSA:1.10.287.130 395 474 1.1E-10 T 18-10-2018 SHALO_2606 d5a386a6fb2b18f67b4bd9048801d422 634 Gene3D G3DSA:3.40.50.2300 164 331 3.4E-11 T 18-10-2018 SHALO_2606 d5a386a6fb2b18f67b4bd9048801d422 634 SMART SM00387 520 634 8.6E-18 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_2606 d5a386a6fb2b18f67b4bd9048801d422 634 Gene3D G3DSA:3.30.565.10 479 632 3.3E-34 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_2606 d5a386a6fb2b18f67b4bd9048801d422 634 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 522 630 5.1E-19 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_2606 d5a386a6fb2b18f67b4bd9048801d422 634 SUPERFAMILY SSF55874 477 630 1.7E-30 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_2606 d5a386a6fb2b18f67b4bd9048801d422 634 Gene3D G3DSA:3.40.50.2300 102 316 3.4E-11 T 18-10-2018 SHALO_0002 b70f0d35e157f170865af625f09d59bc 355 Gene3D G3DSA:3.10.150.10 242 355 3.8E-35 T 18-10-2018 SHALO_0002 b70f0d35e157f170865af625f09d59bc 355 Gene3D G3DSA:3.10.150.10 122 241 1.3E-29 T 18-10-2018 SHALO_0002 b70f0d35e157f170865af625f09d59bc 355 SUPERFAMILY SSF55979 240 354 1.45E-20 T 18-10-2018 SHALO_0002 b70f0d35e157f170865af625f09d59bc 355 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 241 353 3.0E-13 T 18-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 SHALO_0002 b70f0d35e157f170865af625f09d59bc 355 SUPERFAMILY SSF55979 126 239 8.79E-23 T 18-10-2018 SHALO_0002 b70f0d35e157f170865af625f09d59bc 355 Pfam PF02767 DNA polymerase III beta subunit, central domain 129 238 7.5E-20 T 18-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 SHALO_0002 b70f0d35e157f170865af625f09d59bc 355 SMART SM00480 17 354 1.3E-70 T 18-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 SHALO_0002 b70f0d35e157f170865af625f09d59bc 355 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 353 1.2E-79 T 18-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 SHALO_0002 b70f0d35e157f170865af625f09d59bc 355 SUPERFAMILY SSF55979 1 119 6.29E-21 T 18-10-2018 SHALO_0002 b70f0d35e157f170865af625f09d59bc 355 PIRSF PIRSF000804 1 355 1.9E-73 T 18-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 SHALO_0002 b70f0d35e157f170865af625f09d59bc 355 Gene3D G3DSA:3.10.150.10 1 118 1.6E-23 T 18-10-2018 SHALO_0002 b70f0d35e157f170865af625f09d59bc 355 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 117 4.0E-16 T 18-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 SHALO_1621 b1a859ff75e44a44d8a1710af9f6fc8e 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 377 404 8.7E-21 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 SHALO_1621 b1a859ff75e44a44d8a1710af9f6fc8e 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 8.7E-21 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 SHALO_1621 b1a859ff75e44a44d8a1710af9f6fc8e 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 406 435 8.7E-21 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 SHALO_1621 b1a859ff75e44a44d8a1710af9f6fc8e 541 SUPERFAMILY SSF58104 233 541 8.5E-57 T 18-10-2018 SHALO_1621 b1a859ff75e44a44d8a1710af9f6fc8e 541 SMART SM00283 282 526 6.2E-34 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_1621 b1a859ff75e44a44d8a1710af9f6fc8e 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 357 502 2.4E-32 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_1621 b1a859ff75e44a44d8a1710af9f6fc8e 541 SMART SM00304 211 264 0.0012 T 18-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 SHALO_1621 b1a859ff75e44a44d8a1710af9f6fc8e 541 Gene3D G3DSA:1.10.287.950 211 541 1.3E-55 T 18-10-2018 SHALO_0228 72983d284e9c337e586246f7187b5049 958 Pfam PF05359 Domain of Unknown Function (DUF748) 358 507 1.3E-20 T 18-10-2018 IPR008023 Protein of unknown function DUF748 SHALO_0228 72983d284e9c337e586246f7187b5049 958 Pfam PF05359 Domain of Unknown Function (DUF748) 144 294 1.4E-17 T 18-10-2018 IPR008023 Protein of unknown function DUF748 SHALO_0228 72983d284e9c337e586246f7187b5049 958 Pfam PF05359 Domain of Unknown Function (DUF748) 572 716 2.4E-31 T 18-10-2018 IPR008023 Protein of unknown function DUF748 SHALO_1279 8569d6a6a69e8f308a6bb0658a606768 388 SUPERFAMILY SSF47384 170 231 2.35E-5 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SHALO_1279 8569d6a6a69e8f308a6bb0658a606768 388 Gene3D G3DSA:3.30.565.10 237 380 2.4E-34 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_1279 8569d6a6a69e8f308a6bb0658a606768 388 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 280 382 1.9E-17 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_1279 8569d6a6a69e8f308a6bb0658a606768 388 SUPERFAMILY SSF55874 242 382 1.15E-28 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_1279 8569d6a6a69e8f308a6bb0658a606768 388 Gene3D G3DSA:1.10.287.130 179 236 2.4E-34 T 18-10-2018 SHALO_1279 8569d6a6a69e8f308a6bb0658a606768 388 SMART SM00387 279 383 7.0E-24 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_1279 8569d6a6a69e8f308a6bb0658a606768 388 PRINTS PR00344 Bacterial sensor protein C-terminal signature 330 340 2.9E-5 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_1279 8569d6a6a69e8f308a6bb0658a606768 388 PRINTS PR00344 Bacterial sensor protein C-terminal signature 343 361 2.9E-5 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_1279 8569d6a6a69e8f308a6bb0658a606768 388 PRINTS PR00344 Bacterial sensor protein C-terminal signature 367 380 2.9E-5 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_1279 8569d6a6a69e8f308a6bb0658a606768 388 PRINTS PR00344 Bacterial sensor protein C-terminal signature 312 326 2.9E-5 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_2779 c9886441a8985776e1aecd46048a25f1 363 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 194 326 8.1E-13 T 18-10-2018 IPR000160 GGDEF domain SHALO_2779 c9886441a8985776e1aecd46048a25f1 363 Gene3D G3DSA:3.30.70.270 190 346 5.2E-15 T 18-10-2018 SHALO_2779 c9886441a8985776e1aecd46048a25f1 363 SUPERFAMILY SSF55073 203 324 1.41E-11 T 18-10-2018 IPR029787 Nucleotide cyclase SHALO_2779 c9886441a8985776e1aecd46048a25f1 363 Pfam PF00990 Diguanylate cyclase, GGDEF domain 198 325 1.7E-10 T 18-10-2018 IPR000160 GGDEF domain SHALO_2779 c9886441a8985776e1aecd46048a25f1 363 SMART SM00267 185 351 3.3E-5 T 18-10-2018 IPR000160 GGDEF domain SHALO_0695 ff163046e4883e9bd8dd4648f1cfdb6c 205 Pfam PF13114 RecO N terminal 1 72 4.8E-33 T 18-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal SHALO_0525 110f5b14498d4ef10a47983a779ca8c6 187 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 7 187 4.6E-71 T 18-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 SHALO_0525 110f5b14498d4ef10a47983a779ca8c6 187 SUPERFAMILY SSF142695 3 165 1.44E-49 T 18-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 SHALO_0525 110f5b14498d4ef10a47983a779ca8c6 187 Pfam PF00925 GTP cyclohydrolase II 9 163 7.6E-57 T 18-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 SHALO_0525 110f5b14498d4ef10a47983a779ca8c6 187 Gene3D G3DSA:3.40.50.10990 1 167 4.2E-65 T 18-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 SHALO_0525 110f5b14498d4ef10a47983a779ca8c6 187 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 1 187 35.635 T 18-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 SHALO_2120 32b28a93be1e588f4dd8e5f2659af273 438 Gene3D G3DSA:3.40.630.10 12 249 1.2E-33 T 18-10-2018 SHALO_2120 32b28a93be1e588f4dd8e5f2659af273 438 Pfam PF17129 C-terminal domain of metallo-carboxypeptidase 336 430 2.3E-22 T 18-10-2018 IPR033397 Metallo-carboxypeptidase, C-terminal domain SHALO_2120 32b28a93be1e588f4dd8e5f2659af273 438 Pfam PF17033 Carboxypeptidase controlling helical cell shape catalytic 7 265 1.5E-71 T 18-10-2018 IPR031489 D,L-carboxypeptidase, peptidase domain SHALO_2120 32b28a93be1e588f4dd8e5f2659af273 438 SUPERFAMILY SSF53187 29 250 2.15E-27 T 18-10-2018 SHALO_1288 4936416894a7eb91d71b6baacfdd47bd 681 Gene3D G3DSA:3.30.565.10 519 669 1.4E-23 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_1288 4936416894a7eb91d71b6baacfdd47bd 681 Pfam PF10442 FIST C domain 220 347 4.1E-20 T 18-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 SHALO_1288 4936416894a7eb91d71b6baacfdd47bd 681 SMART SM01204 219 348 7.6E-29 T 18-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 SHALO_1288 4936416894a7eb91d71b6baacfdd47bd 681 PRINTS PR00344 Bacterial sensor protein C-terminal signature 598 612 6.5E-5 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_1288 4936416894a7eb91d71b6baacfdd47bd 681 PRINTS PR00344 Bacterial sensor protein C-terminal signature 616 626 6.5E-5 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_1288 4936416894a7eb91d71b6baacfdd47bd 681 PRINTS PR00344 Bacterial sensor protein C-terminal signature 628 646 6.5E-5 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_1288 4936416894a7eb91d71b6baacfdd47bd 681 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 559 665 4.4E-13 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_1288 4936416894a7eb91d71b6baacfdd47bd 681 SUPERFAMILY SSF55874 512 668 1.2E-23 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_1288 4936416894a7eb91d71b6baacfdd47bd 681 SMART SM00897 26 218 2.8E-28 T 18-10-2018 IPR013702 FIST domain, N-terminal SHALO_1288 4936416894a7eb91d71b6baacfdd47bd 681 SUPERFAMILY SSF47384 440 514 1.31E-7 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SHALO_1288 4936416894a7eb91d71b6baacfdd47bd 681 Gene3D G3DSA:1.10.287.130 430 514 1.2E-9 T 18-10-2018 SHALO_1288 4936416894a7eb91d71b6baacfdd47bd 681 Pfam PF08495 FIST N domain 31 216 1.6E-25 T 18-10-2018 IPR013702 FIST domain, N-terminal SHALO_1288 4936416894a7eb91d71b6baacfdd47bd 681 SMART SM00387 555 668 2.4E-16 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_0843 a87d7d9e1f4debc1060319aa837026c6 327 SUPERFAMILY SSF55174 10 59 1.14E-7 T 18-10-2018 SHALO_0843 a87d7d9e1f4debc1060319aa837026c6 327 Gene3D G3DSA:3.30.2350.10 75 300 8.9E-58 T 18-10-2018 SHALO_0843 a87d7d9e1f4debc1060319aa837026c6 327 Pfam PF01479 S4 domain 10 55 8.8E-5 T 18-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_0843 a87d7d9e1f4debc1060319aa837026c6 327 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 7 295 5.9E-68 T 18-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHALO_0843 a87d7d9e1f4debc1060319aa837026c6 327 Gene3D G3DSA:3.10.290.10 4 62 2.0E-9 T 18-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 SHALO_0843 a87d7d9e1f4debc1060319aa837026c6 327 SMART SM00363 9 66 0.001 T 18-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_0843 a87d7d9e1f4debc1060319aa837026c6 327 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 129 143 - T 18-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHALO_0843 a87d7d9e1f4debc1060319aa837026c6 327 SUPERFAMILY SSF55120 70 295 7.2E-60 T 18-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHALO_0843 a87d7d9e1f4debc1060319aa837026c6 327 Pfam PF00849 RNA pseudouridylate synthase 83 239 4.4E-26 T 18-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHALO_0357 20336cff05d8bd1759e21706f724597c 867 Gene3D G3DSA:2.60.40.420 527 644 1.3E-30 T 18-10-2018 IPR008972 Cupredoxin SHALO_0357 20336cff05d8bd1759e21706f724597c 867 TIGRFAM TIGR04246 nitrous_NosZ_Gp: nitrous-oxide reductase, Sec-dependent 48 645 1.4E-264 T 18-10-2018 IPR026468 Nitrous-oxide reductase, Sec-dependent SHALO_0357 20336cff05d8bd1759e21706f724597c 867 Gene3D G3DSA:1.10.760.10 755 863 6.1E-21 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_0357 20336cff05d8bd1759e21706f724597c 867 SUPERFAMILY SSF49503 479 657 8.84E-27 T 18-10-2018 IPR008972 Cupredoxin SHALO_0357 20336cff05d8bd1759e21706f724597c 867 SUPERFAMILY SSF50974 52 518 2.75E-88 T 18-10-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 SHALO_0357 20336cff05d8bd1759e21706f724597c 867 Pfam PF00034 Cytochrome c 772 859 3.6E-7 T 18-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_0357 20336cff05d8bd1759e21706f724597c 867 Pfam PF13473 Cupredoxin-like domain 555 629 1.3E-7 T 18-10-2018 IPR028096 EfeO-type cupredoxin-like domain SHALO_0357 20336cff05d8bd1759e21706f724597c 867 SUPERFAMILY SSF46626 761 861 3.15E-17 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_0357 20336cff05d8bd1759e21706f724597c 867 Gene3D G3DSA:2.130.10.10 52 526 1.1E-168 T 18-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 SHALO_1885 68225d911ff7e3cb71d4ece59baae9bb 438 ProSitePatterns PS01219 Ammonium transporters signature. 191 216 - T 18-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 SHALO_1885 68225d911ff7e3cb71d4ece59baae9bb 438 Pfam PF00909 Ammonium Transporter Family 40 435 1.6E-122 T 18-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 SHALO_1885 68225d911ff7e3cb71d4ece59baae9bb 438 PRINTS PR00342 Rhesus blood group protein signature 135 151 6.8E-8 T 18-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 SHALO_1885 68225d911ff7e3cb71d4ece59baae9bb 438 PRINTS PR00342 Rhesus blood group protein signature 229 247 6.8E-8 T 18-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 SHALO_1885 68225d911ff7e3cb71d4ece59baae9bb 438 PRINTS PR00342 Rhesus blood group protein signature 315 333 6.8E-8 T 18-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 SHALO_1885 68225d911ff7e3cb71d4ece59baae9bb 438 SUPERFAMILY SSF111352 34 411 5.23E-124 T 18-10-2018 SHALO_1885 68225d911ff7e3cb71d4ece59baae9bb 438 TIGRFAM TIGR00836 amt: ammonium transporter 38 434 8.5E-137 T 18-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 SHALO_1885 68225d911ff7e3cb71d4ece59baae9bb 438 Gene3D G3DSA:1.10.3430.10 17 438 3.0E-138 T 18-10-2018 IPR029020 Ammonium/urea transporter SHALO_0673 15e653f131247662d8bf6a1e6dc543aa 305 Gene3D G3DSA:3.10.25.10 205 305 5.4E-17 T 18-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SHALO_0673 15e653f131247662d8bf6a1e6dc543aa 305 Pfam PF02911 Formyl transferase, C-terminal domain 202 296 5.3E-18 T 18-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SHALO_0673 15e653f131247662d8bf6a1e6dc543aa 305 Pfam PF00551 Formyl transferase 1 177 1.7E-35 T 18-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SHALO_0673 15e653f131247662d8bf6a1e6dc543aa 305 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 1 299 30.106 T 18-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 SHALO_0673 15e653f131247662d8bf6a1e6dc543aa 305 SUPERFAMILY SSF53328 1 204 2.09E-50 T 18-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SHALO_0673 15e653f131247662d8bf6a1e6dc543aa 305 Gene3D G3DSA:3.40.50.170 1 204 1.5E-61 T 18-10-2018 SHALO_0673 15e653f131247662d8bf6a1e6dc543aa 305 SUPERFAMILY SSF50486 203 304 3.14E-20 T 18-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 SHALO_0673 15e653f131247662d8bf6a1e6dc543aa 305 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 1 301 4.5E-74 T 18-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 SHALO_0162 c356a1966d28345e52ecacbc4187e7bf 339 SUPERFAMILY SSF51430 1 335 2.88E-93 T 18-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily SHALO_0162 c356a1966d28345e52ecacbc4187e7bf 339 Gene3D G3DSA:3.20.20.100 1 339 9.6E-108 T 18-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily SHALO_0162 c356a1966d28345e52ecacbc4187e7bf 339 Pfam PF00248 Aldo/keto reductase family 15 330 6.7E-70 T 18-10-2018 IPR023210 NADP-dependent oxidoreductase domain SHALO_2117 24043ee726bdb80c452fab3fa3c41b26 589 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 410 573 6.0E-51 T 18-10-2018 IPR000160 GGDEF domain SHALO_2117 24043ee726bdb80c452fab3fa3c41b26 589 Gene3D G3DSA:3.30.70.270 407 577 5.1E-54 T 18-10-2018 SHALO_2117 24043ee726bdb80c452fab3fa3c41b26 589 SUPERFAMILY SSF55073 418 575 1.57E-47 T 18-10-2018 IPR029787 Nucleotide cyclase SHALO_2117 24043ee726bdb80c452fab3fa3c41b26 589 SMART SM00267 402 575 4.4E-52 T 18-10-2018 IPR000160 GGDEF domain SHALO_2117 24043ee726bdb80c452fab3fa3c41b26 589 Pfam PF00990 Diguanylate cyclase, GGDEF domain 414 570 2.0E-45 T 18-10-2018 IPR000160 GGDEF domain SHALO_0979 51a549d6742dc0734fdac181d979fabe 296 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 46 272 1.9E-67 T 18-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 SHALO_0979 51a549d6742dc0734fdac181d979fabe 296 Pfam PF02666 Phosphatidylserine decarboxylase 56 272 7.4E-54 T 18-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 SHALO_1523 7a4f9a50a3ecb219081f251fdc431477 234 Gene3D G3DSA:3.30.950.10 128 230 1.4E-21 T 18-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 SHALO_1523 7a4f9a50a3ecb219081f251fdc431477 234 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 3 207 1.6E-44 T 18-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 SHALO_1523 7a4f9a50a3ecb219081f251fdc431477 234 PIRSF PIRSF036427 1 232 3.1E-70 T 18-10-2018 IPR012382 Precorrin-2 C(20)-methyltransferase GO:0008757|GO:0009236|GO:0030788 SHALO_1523 7a4f9a50a3ecb219081f251fdc431477 234 Gene3D G3DSA:3.40.1010.10 1 126 2.1E-29 T 18-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 SHALO_1523 7a4f9a50a3ecb219081f251fdc431477 234 SUPERFAMILY SSF53790 3 228 1.44E-41 T 18-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 SHALO_1523 7a4f9a50a3ecb219081f251fdc431477 234 TIGRFAM TIGR01467 cobI_cbiL: precorrin-2 C(20)-methyltransferase 3 228 3.7E-66 T 18-10-2018 IPR006364 Precorrin-2 C(20)-methyltransferase domain GO:0008757|GO:0009236 SHALO_1991 18e293d50204c385bf2a84b79e356a84 220 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 35 152 1.9E-16 T 18-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 SHALO_1991 18e293d50204c385bf2a84b79e356a84 220 Pfam PF00633 Helix-hairpin-helix motif 112 134 1.8E-5 T 18-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 SHALO_1991 18e293d50204c385bf2a84b79e356a84 220 Gene3D G3DSA:1.10.1670.10 3 206 4.7E-93 T 18-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 SHALO_1991 18e293d50204c385bf2a84b79e356a84 220 Gene3D G3DSA:1.10.340.30 22 140 4.7E-93 T 18-10-2018 SHALO_1991 18e293d50204c385bf2a84b79e356a84 220 SUPERFAMILY SSF48150 15 205 2.2E-40 T 18-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 SHALO_1991 18e293d50204c385bf2a84b79e356a84 220 SMART SM00478 39 186 9.2E-22 T 18-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 SHALO_1267 a5480a63e940223dfdb9876d346ce17e 484 SUPERFAMILY SSF53807 40 481 1.84E-156 T 18-10-2018 SHALO_1267 a5480a63e940223dfdb9876d346ce17e 484 Gene3D G3DSA:3.40.50.1980 65 207 2.8E-205 T 18-10-2018 SHALO_1267 a5480a63e940223dfdb9876d346ce17e 484 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 83 90 - T 18-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 SHALO_1267 a5480a63e940223dfdb9876d346ce17e 484 TIGRFAM TIGR01862 N2-ase-Ialpha: nitrogenase component I, alpha chain 29 475 3.7E-181 T 18-10-2018 IPR010143 Nitrogenase component 1, alpha chain GO:0009399|GO:0016163|GO:0051536|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 SHALO_1267 a5480a63e940223dfdb9876d346ce17e 484 Gene3D G3DSA:3.40.50.1980 29 475 2.8E-205 T 18-10-2018 SHALO_1267 a5480a63e940223dfdb9876d346ce17e 484 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 64 468 1.3E-107 T 18-10-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 SHALO_1267 a5480a63e940223dfdb9876d346ce17e 484 TIGRFAM TIGR01282 nifD: nitrogenase molybdenum-iron protein alpha chain 14 481 4.9E-247 T 18-10-2018 IPR005972 Nitrogenase molybdenum-iron protein alpha chain GO:0009399|GO:0016163|GO:0016612|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 SHALO_1267 a5480a63e940223dfdb9876d346ce17e 484 ProSitePatterns PS00090 Nitrogenases component 1 alpha and beta subunits signature 2. 154 168 - T 18-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 SHALO_1267 a5480a63e940223dfdb9876d346ce17e 484 Gene3D G3DSA:3.40.50.1980 208 347 2.8E-205 T 18-10-2018 SHALO_1900 3ab2c41db154d4d00cd68be43429394a 374 Pfam PF01743 Poly A polymerase head domain 29 148 5.0E-15 T 18-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 SHALO_1900 3ab2c41db154d4d00cd68be43429394a 374 Gene3D G3DSA:1.10.3090.10 149 373 1.2E-22 T 18-10-2018 SHALO_1900 3ab2c41db154d4d00cd68be43429394a 374 Gene3D G3DSA:3.30.460.10 10 148 1.7E-21 T 18-10-2018 SHALO_1900 3ab2c41db154d4d00cd68be43429394a 374 SUPERFAMILY SSF81891 152 290 2.49E-21 T 18-10-2018 SHALO_1900 3ab2c41db154d4d00cd68be43429394a 374 SUPERFAMILY SSF81301 14 145 7.19E-23 T 18-10-2018 SHALO_0272 1c7e071caa16c98ea676eaf03d6b422a 50 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 50 1.1E-16 T 18-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_0272 1c7e071caa16c98ea676eaf03d6b422a 50 SUPERFAMILY SSF57829 1 50 4.58E-12 T 18-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 SHALO_0272 1c7e071caa16c98ea676eaf03d6b422a 50 Pfam PF01783 Ribosomal L32p protein family 2 50 6.1E-12 T 18-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_0272 1c7e071caa16c98ea676eaf03d6b422a 50 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 49 14.247 T 18-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_2963 d4ebd3fde73317471e87f8311c2824d2 376 SUPERFAMILY SSF160387 60 160 1.39E-29 T 18-10-2018 SHALO_2963 d4ebd3fde73317471e87f8311c2824d2 376 Gene3D G3DSA:3.30.70.2050 107 169 1.8E-10 T 18-10-2018 SHALO_2963 d4ebd3fde73317471e87f8311c2824d2 376 Gene3D G3DSA:3.30.70.2050 324 376 9.2E-12 T 18-10-2018 SHALO_2963 d4ebd3fde73317471e87f8311c2824d2 376 SUPERFAMILY SSF160387 273 373 4.71E-24 T 18-10-2018 SHALO_2963 d4ebd3fde73317471e87f8311c2824d2 376 Pfam PF05573 NosL 36 147 3.8E-21 T 18-10-2018 IPR008719 Nitrous oxide reductase accessory protein NosL SHALO_2963 d4ebd3fde73317471e87f8311c2824d2 376 Pfam PF05573 NosL 234 371 2.8E-31 T 18-10-2018 IPR008719 Nitrous oxide reductase accessory protein NosL SHALO_0190 cc86156276876e769528a3f7969a3d6a 204 Pfam PF12838 4Fe-4S dicluster domain 91 143 2.9E-10 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_0190 cc86156276876e769528a3f7969a3d6a 204 SUPERFAMILY SSF54862 64 163 6.28E-21 T 18-10-2018 SHALO_0190 cc86156276876e769528a3f7969a3d6a 204 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 37 195 25.138 T 18-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0190 cc86156276876e769528a3f7969a3d6a 204 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 46 168 6.0E-40 T 18-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0190 cc86156276876e769528a3f7969a3d6a 204 Gene3D G3DSA:3.30.70.3270 64 199 3.3E-31 T 18-10-2018 SHALO_0190 cc86156276876e769528a3f7969a3d6a 204 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 131 142 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_2412 df4c8ab1af410563317865d2e7ab991a 130 Gene3D G3DSA:3.30.420.80 1 130 6.4E-49 T 18-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 SHALO_2412 df4c8ab1af410563317865d2e7ab991a 130 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 130 32.293 T 18-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 SHALO_2412 df4c8ab1af410563317865d2e7ab991a 130 PIRSF PIRSF002131 1 130 4.1E-47 T 18-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 SHALO_2412 df4c8ab1af410563317865d2e7ab991a 130 SUPERFAMILY SSF53137 13 130 7.85E-43 T 18-10-2018 SHALO_2412 df4c8ab1af410563317865d2e7ab991a 130 Pfam PF00411 Ribosomal protein S11 19 129 2.1E-42 T 18-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 SHALO_2412 df4c8ab1af410563317865d2e7ab991a 130 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 12 127 2.0E-52 T 18-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_0186 384b7e09c452fe6662b965e46e685f24 79 Pfam PF16514 putative NADH-ubiquinone oxidoreductase chain E 1 73 2.1E-37 T 18-10-2018 IPR032424 Putative NADH-ubiquinone oxidoreductase chain E SHALO_0186 384b7e09c452fe6662b965e46e685f24 79 Gene3D G3DSA:3.30.110.40 1 75 1.3E-35 T 18-10-2018 IPR036868 TusA-like domain superfamily SHALO_2613 fd6f76c0e100f87293689258d953c3ff 359 Pfam PF08279 HTH domain 294 335 7.6E-6 T 18-10-2018 IPR013196 Helix-turn-helix, type 11 SHALO_2613 fd6f76c0e100f87293689258d953c3ff 359 Pfam PF13784 Fic/DOC family N-terminal 22 101 2.8E-26 T 18-10-2018 IPR025758 Fic/DOC N-terminal SHALO_2613 fd6f76c0e100f87293689258d953c3ff 359 SUPERFAMILY SSF46785 273 346 2.67E-9 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SHALO_2613 fd6f76c0e100f87293689258d953c3ff 359 Gene3D G3DSA:1.10.10.10 285 355 5.6E-7 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_2613 fd6f76c0e100f87293689258d953c3ff 359 SUPERFAMILY SSF140931 87 276 8.63E-34 T 18-10-2018 IPR036597 Fido-like domain superfamily SHALO_2613 fd6f76c0e100f87293689258d953c3ff 359 PIRSF PIRSF038925 1 357 2.7E-117 T 18-10-2018 IPR026287 Adenosine monophosphate-protein transferase SHALO_2613 fd6f76c0e100f87293689258d953c3ff 359 Pfam PF02661 Fic/DOC family 113 210 1.2E-20 T 18-10-2018 IPR003812 Fido domain SHALO_2613 fd6f76c0e100f87293689258d953c3ff 359 Gene3D G3DSA:1.10.3290.10 23 281 8.0E-43 T 18-10-2018 IPR036597 Fido-like domain superfamily SHALO_0575 a1f689a574f4240feca7034648dafe88 321 SUPERFAMILY SSF161098 89 306 3.4E-16 T 18-10-2018 IPR035906 MetI-like superfamily SHALO_0575 a1f689a574f4240feca7034648dafe88 321 Gene3D G3DSA:1.10.3720.10 86 314 8.0E-16 T 18-10-2018 IPR035906 MetI-like superfamily SHALO_0575 a1f689a574f4240feca7034648dafe88 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 318 7.0E-30 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 SHALO_0864 b88c8be8aef83ec5c97f713ee10fd57d 266 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 256 2.5E-80 T 18-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 SHALO_0864 b88c8be8aef83ec5c97f713ee10fd57d 266 PIRSF PIRSF005902 1 260 6.8E-77 T 18-10-2018 IPR001130 TatD family GO:0016788 SHALO_0864 b88c8be8aef83ec5c97f713ee10fd57d 266 Gene3D G3DSA:3.20.20.140 1 263 3.8E-87 T 18-10-2018 SHALO_0864 b88c8be8aef83ec5c97f713ee10fd57d 266 Pfam PF01026 TatD related DNase 3 256 1.9E-71 T 18-10-2018 IPR001130 TatD family GO:0016788 SHALO_0864 b88c8be8aef83ec5c97f713ee10fd57d 266 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 128 138 - T 18-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 SHALO_0864 b88c8be8aef83ec5c97f713ee10fd57d 266 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 192 208 - T 18-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 SHALO_0864 b88c8be8aef83ec5c97f713ee10fd57d 266 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 18-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 SHALO_0864 b88c8be8aef83ec5c97f713ee10fd57d 266 SUPERFAMILY SSF51556 2 256 1.01E-80 T 18-10-2018 IPR032466 Metal-dependent hydrolase SHALO_0477 2d2d1f4ae9996ddb9b980d913976459e 160 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 1 156 22.147 T 18-10-2018 IPR022973 Ribosomal protein L10 SHALO_0477 2d2d1f4ae9996ddb9b980d913976459e 160 ProSitePatterns PS01109 Ribosomal protein L10 signature. 6 40 - T 18-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_0477 2d2d1f4ae9996ddb9b980d913976459e 160 SUPERFAMILY SSF160369 2 155 1.83E-39 T 18-10-2018 SHALO_0477 2d2d1f4ae9996ddb9b980d913976459e 160 Gene3D G3DSA:3.30.70.1730 1 129 1.3E-32 T 18-10-2018 SHALO_0477 2d2d1f4ae9996ddb9b980d913976459e 160 Pfam PF00466 Ribosomal protein L10 2 96 9.4E-19 T 18-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 SHALO_0838 be6c27c4867134b0dd5ff3b790caa2b8 479 Pfam PF02386 Cation transport protein 292 471 1.3E-26 T 18-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 SHALO_0838 be6c27c4867134b0dd5ff3b790caa2b8 479 Pfam PF02386 Cation transport protein 50 256 2.8E-27 T 18-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 SHALO_0838 be6c27c4867134b0dd5ff3b790caa2b8 479 PIRSF PIRSF006247 1 478 8.9E-141 T 18-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 SHALO_2322 552983806ef19d67cec0b4ea3d6f1ba0 267 Pfam PF13852 Protein of unknown function (DUF4197) 43 266 5.0E-69 T 18-10-2018 IPR025245 Protein of unknown function DUF4197 SHALO_0512 df3535a3cf5b4bece676528a37202749 555 SUPERFAMILY SSF56762 181 555 1.7E-115 T 18-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0512 df3535a3cf5b4bece676528a37202749 555 SUPERFAMILY SSF143243 11 185 1.01E-41 T 18-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0512 df3535a3cf5b4bece676528a37202749 555 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 77 138 1.0E-12 T 18-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0512 df3535a3cf5b4bece676528a37202749 555 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 153 555 43.006 T 18-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0512 df3535a3cf5b4bece676528a37202749 555 Gene3D G3DSA:1.10.645.20 170 555 2.0E-146 T 18-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0512 df3535a3cf5b4bece676528a37202749 555 Hamap MF_01397 NADH-quinone oxidoreductase subunit C/D [nuoC]. 17 555 46.774 T 18-10-2018 IPR026662 NADH-quinone oxidoreductase subunit CD GO:0030964|GO:0050136|GO:0055114 KEGG: 00190+1.6.5.11 SHALO_0512 df3535a3cf5b4bece676528a37202749 555 Gene3D G3DSA:3.30.460.80 3 122 5.2E-25 T 18-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0512 df3535a3cf5b4bece676528a37202749 555 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 23 142 2.5E-32 T 18-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0512 df3535a3cf5b4bece676528a37202749 555 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 171 555 2.4E-140 T 18-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0512 df3535a3cf5b4bece676528a37202749 555 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 285 555 1.9E-103 T 18-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0667 af8c09ecdbeaac77768c80943c1f3e77 350 SUPERFAMILY SSF103039 204 346 1.96E-17 T 18-10-2018 IPR028976 CheC-like superfamily SHALO_0667 af8c09ecdbeaac77768c80943c1f3e77 350 Gene3D G3DSA:3.40.1550.10 196 349 1.3E-23 T 18-10-2018 IPR028976 CheC-like superfamily SHALO_0667 af8c09ecdbeaac77768c80943c1f3e77 350 Pfam PF13690 Chemotaxis phosphatase CheX 241 337 2.3E-13 T 18-10-2018 IPR028051 Chemotaxis phosphatase CheX-like domain SHALO_1486 6fa515654506bcf87bb500ccb45b3553 560 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 439 544 9.5E-8 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_1486 6fa515654506bcf87bb500ccb45b3553 560 Gene3D G3DSA:3.30.565.10 394 547 3.4E-20 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_1486 6fa515654506bcf87bb500ccb45b3553 560 Gene3D G3DSA:1.10.287.130 311 391 7.7E-7 T 18-10-2018 SHALO_1486 6fa515654506bcf87bb500ccb45b3553 560 Gene3D G3DSA:3.30.450.20 139 272 7.2E-14 T 18-10-2018 SHALO_1486 6fa515654506bcf87bb500ccb45b3553 560 SUPERFAMILY SSF55874 391 544 4.73E-18 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_1486 6fa515654506bcf87bb500ccb45b3553 560 SUPERFAMILY SSF47384 317 393 1.0E-4 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SHALO_1486 6fa515654506bcf87bb500ccb45b3553 560 SMART SM00387 436 548 3.4E-6 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_1486 6fa515654506bcf87bb500ccb45b3553 560 Pfam PF02743 Cache domain 36 258 4.5E-16 T 18-10-2018 IPR033479 Double Cache domain 1 SHALO_2437 13c53374dfb145487568aaf3ed736fcb 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 1 100 26.304 T 18-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_2437 13c53374dfb145487568aaf3ed736fcb 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 2 99 5.0E-43 T 18-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_2437 13c53374dfb145487568aaf3ed736fcb 103 SUPERFAMILY SSF54999 3 98 7.06E-38 T 18-10-2018 IPR036838 Ribosomal protein S10 domain superfamily SHALO_2437 13c53374dfb145487568aaf3ed736fcb 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 27 42 - T 18-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_2437 13c53374dfb145487568aaf3ed736fcb 103 Pfam PF00338 Ribosomal protein S10p/S20e 5 98 1.9E-35 T 18-10-2018 IPR027486 Ribosomal protein S10 domain SHALO_2437 13c53374dfb145487568aaf3ed736fcb 103 SMART SM01403 5 99 3.4E-51 T 18-10-2018 IPR027486 Ribosomal protein S10 domain SHALO_2437 13c53374dfb145487568aaf3ed736fcb 103 PRINTS PR00971 Ribosomal protein S10 family signature 59 73 3.6E-20 T 18-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_2437 13c53374dfb145487568aaf3ed736fcb 103 PRINTS PR00971 Ribosomal protein S10 family signature 3 16 3.6E-20 T 18-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_2437 13c53374dfb145487568aaf3ed736fcb 103 PRINTS PR00971 Ribosomal protein S10 family signature 38 53 3.6E-20 T 18-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_2437 13c53374dfb145487568aaf3ed736fcb 103 Gene3D G3DSA:3.30.70.600 1 100 2.9E-37 T 18-10-2018 IPR036838 Ribosomal protein S10 domain superfamily SHALO_2141 c80d7945b7a3cf5c71b4db18f9888427 148 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 5 139 8.8E-20 T 18-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SHALO_2141 c80d7945b7a3cf5c71b4db18f9888427 148 SUPERFAMILY SSF53163 3 141 8.11E-20 T 18-10-2018 IPR023430 Peptidase HybD-like domain superfamily SHALO_2141 c80d7945b7a3cf5c71b4db18f9888427 148 Gene3D G3DSA:3.40.50.1450 1 148 5.2E-49 T 18-10-2018 IPR023430 Peptidase HybD-like domain superfamily SHALO_1129 ff64dff17281ac98328e7dc380402b53 256 Pfam PF02481 DNA recombination-mediator protein A 12 194 2.8E-51 T 18-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 SHALO_1129 ff64dff17281ac98328e7dc380402b53 256 SUPERFAMILY SSF102405 12 191 1.33E-23 T 18-10-2018 SHALO_1129 ff64dff17281ac98328e7dc380402b53 256 Gene3D G3DSA:3.40.50.450 3 213 1.6E-59 T 18-10-2018 SHALO_2620 6426e276206aa90011385a5e3d242667 290 SUPERFAMILY SSF81901 29 132 3.53E-23 T 18-10-2018 SHALO_2620 6426e276206aa90011385a5e3d242667 290 Pfam PF08238 Sel1 repeat 242 274 1.4E-4 T 18-10-2018 IPR006597 Sel1-like repeat SHALO_2620 6426e276206aa90011385a5e3d242667 290 Pfam PF08238 Sel1 repeat 133 165 2.9E-6 T 18-10-2018 IPR006597 Sel1-like repeat SHALO_2620 6426e276206aa90011385a5e3d242667 290 Pfam PF08238 Sel1 repeat 98 132 6.8E-7 T 18-10-2018 IPR006597 Sel1-like repeat SHALO_2620 6426e276206aa90011385a5e3d242667 290 Pfam PF08238 Sel1 repeat 209 238 0.23 T 18-10-2018 IPR006597 Sel1-like repeat SHALO_2620 6426e276206aa90011385a5e3d242667 290 Pfam PF08238 Sel1 repeat 61 96 7.0E-8 T 18-10-2018 IPR006597 Sel1-like repeat SHALO_2620 6426e276206aa90011385a5e3d242667 290 Pfam PF08238 Sel1 repeat 171 201 2.2E-5 T 18-10-2018 IPR006597 Sel1-like repeat SHALO_2620 6426e276206aa90011385a5e3d242667 290 SUPERFAMILY SSF81901 133 282 1.83E-38 T 18-10-2018 SHALO_2620 6426e276206aa90011385a5e3d242667 290 Gene3D G3DSA:1.25.40.10 12 133 2.2E-25 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SHALO_2620 6426e276206aa90011385a5e3d242667 290 SMART SM00671 168 203 2.2E-9 T 18-10-2018 IPR006597 Sel1-like repeat SHALO_2620 6426e276206aa90011385a5e3d242667 290 SMART SM00671 61 97 1.4E-8 T 18-10-2018 IPR006597 Sel1-like repeat SHALO_2620 6426e276206aa90011385a5e3d242667 290 SMART SM00671 204 239 3.3E-6 T 18-10-2018 IPR006597 Sel1-like repeat SHALO_2620 6426e276206aa90011385a5e3d242667 290 SMART SM00671 134 167 8.1E-7 T 18-10-2018 IPR006597 Sel1-like repeat SHALO_2620 6426e276206aa90011385a5e3d242667 290 SMART SM00671 98 133 2.6E-8 T 18-10-2018 IPR006597 Sel1-like repeat SHALO_2620 6426e276206aa90011385a5e3d242667 290 SMART SM00671 240 275 1.5E-6 T 18-10-2018 IPR006597 Sel1-like repeat SHALO_2620 6426e276206aa90011385a5e3d242667 290 Gene3D G3DSA:1.25.40.10 134 286 1.8E-44 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SHALO_2400 cde98ccf52bd68f7453687d39629d37e 218 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 185 4.6E-33 T 18-10-2018 SHALO_2400 cde98ccf52bd68f7453687d39629d37e 218 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 99 112 1.3E-7 T 18-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 SHALO_2400 cde98ccf52bd68f7453687d39629d37e 218 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 130 146 1.3E-7 T 18-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 SHALO_2400 cde98ccf52bd68f7453687d39629d37e 218 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 1.3E-7 T 18-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 SHALO_2400 cde98ccf52bd68f7453687d39629d37e 218 Gene3D G3DSA:1.10.150.240 16 85 4.4E-54 T 18-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 SHALO_2400 cde98ccf52bd68f7453687d39629d37e 218 Gene3D G3DSA:3.40.50.1000 5 208 4.4E-54 T 18-10-2018 IPR023214 HAD superfamily SHALO_2400 cde98ccf52bd68f7453687d39629d37e 218 SUPERFAMILY SSF56784 1 217 1.01E-55 T 18-10-2018 IPR036412 HAD-like superfamily SHALO_2400 cde98ccf52bd68f7453687d39629d37e 218 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 82 180 5.5E-8 T 18-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 SHALO_0403 261eb8b68c034bc2d932b6bb695bf8f4 340 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 3 335 2.8E-115 T 18-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 SHALO_0403 261eb8b68c034bc2d932b6bb695bf8f4 340 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 16 25 - T 18-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 SHALO_0403 261eb8b68c034bc2d932b6bb695bf8f4 340 Gene3D G3DSA:3.20.20.210 1 339 4.1E-127 T 18-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 SHALO_0403 261eb8b68c034bc2d932b6bb695bf8f4 340 SUPERFAMILY SSF51726 3 335 4.36E-106 T 18-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 SHALO_0403 261eb8b68c034bc2d932b6bb695bf8f4 340 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 136 152 - T 18-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 SHALO_0403 261eb8b68c034bc2d932b6bb695bf8f4 340 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 5 338 45.805 T 18-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 SHALO_0403 261eb8b68c034bc2d932b6bb695bf8f4 340 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 3 335 3.0E-129 T 18-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 SHALO_0179 fd1cc46b236b8620d571d4243c5fd7a2 412 Gene3D G3DSA:2.40.160.60 21 412 1.3E-84 T 18-10-2018 SHALO_0179 fd1cc46b236b8620d571d4243c5fd7a2 412 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 15 412 4.1E-53 T 18-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) SHALO_0179 fd1cc46b236b8620d571d4243c5fd7a2 412 SUPERFAMILY SSF56935 21 412 3.98E-72 T 18-10-2018 SHALO_1841 275b3cfd16a6c9d9ac708cf3e54ac6e9 235 Gene3D G3DSA:3.40.50.2300 1 124 4.3E-30 T 18-10-2018 SHALO_1841 275b3cfd16a6c9d9ac708cf3e54ac6e9 235 SMART SM00448 5 115 1.6E-27 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_1841 275b3cfd16a6c9d9ac708cf3e54ac6e9 235 SUPERFAMILY SSF46894 124 226 4.54E-26 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHALO_1841 275b3cfd16a6c9d9ac708cf3e54ac6e9 235 SMART SM00862 149 225 2.5E-20 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_1841 275b3cfd16a6c9d9ac708cf3e54ac6e9 235 Pfam PF00072 Response regulator receiver domain 7 116 5.1E-23 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_1841 275b3cfd16a6c9d9ac708cf3e54ac6e9 235 SUPERFAMILY SSF52172 4 128 2.13E-32 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_1841 275b3cfd16a6c9d9ac708cf3e54ac6e9 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 225 1.3E-22 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_1841 275b3cfd16a6c9d9ac708cf3e54ac6e9 235 Gene3D G3DSA:1.10.10.10 125 234 1.1E-29 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_1386 607ce05f1cfec2376f785b1206d366e2 434 SUPERFAMILY SSF53448 1 247 5.25E-49 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_1386 607ce05f1cfec2376f785b1206d366e2 434 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 377 405 - T 18-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 SHALO_1386 607ce05f1cfec2376f785b1206d366e2 434 SUPERFAMILY SSF51161 243 412 4.01E-37 T 18-10-2018 IPR011004 Trimeric LpxA-like superfamily SHALO_1386 607ce05f1cfec2376f785b1206d366e2 434 Gene3D G3DSA:3.90.550.10 3 242 5.9E-58 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_1386 607ce05f1cfec2376f785b1206d366e2 434 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 426 34.334 T 18-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 SHALO_1386 607ce05f1cfec2376f785b1206d366e2 434 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 369 403 1.1E-8 T 18-10-2018 IPR001451 Hexapeptide repeat SHALO_1386 607ce05f1cfec2376f785b1206d366e2 434 Gene3D G3DSA:2.160.10.10 243 414 3.3E-39 T 18-10-2018 SHALO_1386 607ce05f1cfec2376f785b1206d366e2 434 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 4 426 6.5E-147 T 18-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 SHALO_1386 607ce05f1cfec2376f785b1206d366e2 434 Pfam PF12804 MobA-like NTP transferase domain 6 134 2.7E-11 T 18-10-2018 IPR025877 MobA-like NTP transferase SHALO_0551 a9c4146189173f99dafda1805d0cd719 262 PIRSF PIRSF000388 1 262 1.0E-99 T 18-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 SHALO_0551 a9c4146189173f99dafda1805d0cd719 262 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 3 260 8.3E-102 T 18-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 SHALO_0551 a9c4146189173f99dafda1805d0cd719 262 Pfam PF02548 Ketopantoate hydroxymethyltransferase 3 255 8.8E-100 T 18-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 SHALO_0551 a9c4146189173f99dafda1805d0cd719 262 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 2 260 37.254 T 18-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 SHALO_0551 a9c4146189173f99dafda1805d0cd719 262 SUPERFAMILY SSF51621 2 260 2.2E-92 T 18-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 SHALO_0551 a9c4146189173f99dafda1805d0cd719 262 Gene3D G3DSA:3.20.20.60 2 262 6.6E-98 T 18-10-2018 SHALO_2737 0bd5d081992306ad341cf09633c92b49 132 Gene3D G3DSA:3.10.490.10 1 132 3.3E-45 T 18-10-2018 SHALO_0482 e9017dc6ac2d0bf9057201a302f2de8e 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 2 156 1.2E-67 T 18-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 SHALO_0482 e9017dc6ac2d0bf9057201a302f2de8e 156 Pfam PF00177 Ribosomal protein S7p/S5e 2 149 3.6E-62 T 18-10-2018 IPR023798 Ribosomal protein S7 domain SHALO_0482 e9017dc6ac2d0bf9057201a302f2de8e 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 19 45 - T 18-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_0482 e9017dc6ac2d0bf9057201a302f2de8e 156 Gene3D G3DSA:1.10.455.10 1 156 2.7E-59 T 18-10-2018 IPR036823 Ribosomal protein S7 domain superfamily SHALO_0482 e9017dc6ac2d0bf9057201a302f2de8e 156 SUPERFAMILY SSF47973 2 152 7.46E-57 T 18-10-2018 IPR036823 Ribosomal protein S7 domain superfamily SHALO_0482 e9017dc6ac2d0bf9057201a302f2de8e 156 PIRSF PIRSF002122 3 156 2.8E-58 T 18-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 SHALO_0482 e9017dc6ac2d0bf9057201a302f2de8e 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.559 T 18-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 SHALO_2236 e7543fff135d81c7370aedbff8aa92f3 456 SUPERFAMILY SSF53738 258 345 9.42E-20 T 18-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHALO_2236 e7543fff135d81c7370aedbff8aa92f3 456 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 154 250 8.8E-18 T 18-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHALO_2236 e7543fff135d81c7370aedbff8aa92f3 456 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 116 2.9E-25 T 18-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHALO_2236 e7543fff135d81c7370aedbff8aa92f3 456 SUPERFAMILY SSF53738 153 254 3.61E-23 T 18-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHALO_2236 e7543fff135d81c7370aedbff8aa92f3 456 SUPERFAMILY SSF53738 3 177 2.5E-30 T 18-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHALO_2236 e7543fff135d81c7370aedbff8aa92f3 456 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 256 349 1.4E-15 T 18-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHALO_2236 e7543fff135d81c7370aedbff8aa92f3 456 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 367 447 8.1E-10 T 18-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHALO_2236 e7543fff135d81c7370aedbff8aa92f3 456 Gene3D G3DSA:3.40.120.10 173 248 1.1E-23 T 18-10-2018 SHALO_2236 e7543fff135d81c7370aedbff8aa92f3 456 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 96 105 - T 18-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHALO_2236 e7543fff135d81c7370aedbff8aa92f3 456 SUPERFAMILY SSF55957 361 450 1.83E-18 T 18-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHALO_2236 e7543fff135d81c7370aedbff8aa92f3 456 Gene3D G3DSA:3.30.310.50 361 456 1.1E-23 T 18-10-2018 SHALO_2236 e7543fff135d81c7370aedbff8aa92f3 456 Gene3D G3DSA:3.40.120.10 1 146 1.6E-40 T 18-10-2018 SHALO_2236 e7543fff135d81c7370aedbff8aa92f3 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 2.3E-20 T 18-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHALO_2236 e7543fff135d81c7370aedbff8aa92f3 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 170 189 2.3E-20 T 18-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHALO_2236 e7543fff135d81c7370aedbff8aa92f3 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 232 247 2.3E-20 T 18-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHALO_2236 e7543fff135d81c7370aedbff8aa92f3 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 204 217 2.3E-20 T 18-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHALO_2236 e7543fff135d81c7370aedbff8aa92f3 456 Gene3D G3DSA:3.40.120.10 250 358 3.4E-23 T 18-10-2018 SHALO_1907 062c3c9a57f87913557d2a08ddd483d4 1036 SUPERFAMILY SSF82693 40 132 3.66E-22 T 18-10-2018 SHALO_1907 062c3c9a57f87913557d2a08ddd483d4 1036 Gene3D G3DSA:3.30.70.1430 566 667 3.2E-299 T 18-10-2018 SHALO_1907 062c3c9a57f87913557d2a08ddd483d4 1036 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 8.9E-90 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SHALO_1907 062c3c9a57f87913557d2a08ddd483d4 1036 PRINTS PR00702 Acriflavin resistance protein family signature 620 634 8.9E-90 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SHALO_1907 062c3c9a57f87913557d2a08ddd483d4 1036 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 8.9E-90 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SHALO_1907 062c3c9a57f87913557d2a08ddd483d4 1036 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 8.9E-90 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SHALO_1907 062c3c9a57f87913557d2a08ddd483d4 1036 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 8.9E-90 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SHALO_1907 062c3c9a57f87913557d2a08ddd483d4 1036 PRINTS PR00702 Acriflavin resistance protein family signature 365 386 8.9E-90 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SHALO_1907 062c3c9a57f87913557d2a08ddd483d4 1036 PRINTS PR00702 Acriflavin resistance protein family signature 551 568 8.9E-90 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SHALO_1907 062c3c9a57f87913557d2a08ddd483d4 1036 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 8.9E-90 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SHALO_1907 062c3c9a57f87913557d2a08ddd483d4 1036 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 8.9E-90 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SHALO_1907 062c3c9a57f87913557d2a08ddd483d4 1036 Gene3D G3DSA:3.30.70.1320 134 334 3.2E-299 T 18-10-2018 SHALO_1907 062c3c9a57f87913557d2a08ddd483d4 1036 SUPERFAMILY SSF82866 299 500 7.06E-49 T 18-10-2018 SHALO_1907 062c3c9a57f87913557d2a08ddd483d4 1036 Gene3D G3DSA:3.30.2090.10 720 808 3.2E-299 T 18-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SHALO_1907 062c3c9a57f87913557d2a08ddd483d4 1036 SUPERFAMILY SSF82693 564 670 9.94E-20 T 18-10-2018 SHALO_1907 062c3c9a57f87913557d2a08ddd483d4 1036 SUPERFAMILY SSF82693 137 332 1.65E-20 T 18-10-2018 SHALO_1907 062c3c9a57f87913557d2a08ddd483d4 1036 Gene3D G3DSA:3.30.70.1440 668 865 3.2E-299 T 18-10-2018 SHALO_1907 062c3c9a57f87913557d2a08ddd483d4 1036 Gene3D G3DSA:1.20.1640.10 512 1022 3.2E-299 T 18-10-2018 SHALO_1907 062c3c9a57f87913557d2a08ddd483d4 1036 Gene3D G3DSA:3.30.2090.10 180 277 3.2E-299 T 18-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SHALO_1907 062c3c9a57f87913557d2a08ddd483d4 1036 SUPERFAMILY SSF82714 721 805 5.49E-20 T 18-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SHALO_1907 062c3c9a57f87913557d2a08ddd483d4 1036 Pfam PF00873 AcrB/AcrD/AcrF family 2 1025 0.0 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SHALO_1907 062c3c9a57f87913557d2a08ddd483d4 1036 SUPERFAMILY SSF82866 805 1030 6.28E-45 T 18-10-2018 SHALO_1907 062c3c9a57f87913557d2a08ddd483d4 1036 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 2 1028 0.0 T 18-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 SHALO_1907 062c3c9a57f87913557d2a08ddd483d4 1036 Gene3D G3DSA:1.20.1640.10 9 511 3.2E-299 T 18-10-2018 SHALO_1907 062c3c9a57f87913557d2a08ddd483d4 1036 SUPERFAMILY SSF82714 184 274 2.62E-21 T 18-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SHALO_1907 062c3c9a57f87913557d2a08ddd483d4 1036 Gene3D G3DSA:3.30.70.1430 39 816 3.2E-299 T 18-10-2018 SHALO_1586 afcf7e2f6ad486ed4655808ed83e2971 262 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 1 260 34.145 T 18-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 SHALO_1586 afcf7e2f6ad486ed4655808ed83e2971 262 SUPERFAMILY SSF51366 11 259 1.01E-83 T 18-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 SHALO_1586 afcf7e2f6ad486ed4655808ed83e2971 262 Gene3D G3DSA:3.20.20.70 1 261 4.2E-98 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_1586 afcf7e2f6ad486ed4655808ed83e2971 262 Pfam PF00218 Indole-3-glycerol phosphate synthase 3 257 1.3E-87 T 18-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 SHALO_1586 afcf7e2f6ad486ed4655808ed83e2971 262 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 54 72 - T 18-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 SHALO_1586 afcf7e2f6ad486ed4655808ed83e2971 262 Hamap MF_00134_A Indole-3-glycerol phosphate synthase [trpC]. 33 256 30.431 T 18-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 SHALO_2965 bc8df0535297ee56baa7aec147aeaf55 301 Pfam PF00892 EamA-like transporter family 6 137 5.1E-16 T 18-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 SHALO_2965 bc8df0535297ee56baa7aec147aeaf55 301 Pfam PF00892 EamA-like transporter family 153 283 8.0E-13 T 18-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 SHALO_2965 bc8df0535297ee56baa7aec147aeaf55 301 SUPERFAMILY SSF103481 194 285 2.62E-6 T 18-10-2018 SHALO_2965 bc8df0535297ee56baa7aec147aeaf55 301 SUPERFAMILY SSF103481 40 140 1.2E-10 T 18-10-2018 SHALO_2778 e8f554b1011d1435df5d6d1229267277 196 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 113 126 - T 18-10-2018 IPR033135 ClpP, histidine active site SHALO_2778 e8f554b1011d1435df5d6d1229267277 196 Pfam PF00574 Clp protease 14 193 1.3E-85 T 18-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA SHALO_2778 e8f554b1011d1435df5d6d1229267277 196 PRINTS PR00127 Clp protease catalytic subunit P signature 20 35 4.4E-54 T 18-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SHALO_2778 e8f554b1011d1435df5d6d1229267277 196 PRINTS PR00127 Clp protease catalytic subunit P signature 91 108 4.4E-54 T 18-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SHALO_2778 e8f554b1011d1435df5d6d1229267277 196 PRINTS PR00127 Clp protease catalytic subunit P signature 112 131 4.4E-54 T 18-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SHALO_2778 e8f554b1011d1435df5d6d1229267277 196 PRINTS PR00127 Clp protease catalytic subunit P signature 169 188 4.4E-54 T 18-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SHALO_2778 e8f554b1011d1435df5d6d1229267277 196 PRINTS PR00127 Clp protease catalytic subunit P signature 60 80 4.4E-54 T 18-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SHALO_2778 e8f554b1011d1435df5d6d1229267277 196 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 4 193 1.8E-105 T 18-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SHALO_2778 e8f554b1011d1435df5d6d1229267277 196 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 91 102 - T 18-10-2018 IPR018215 ClpP, Ser active site SHALO_2778 e8f554b1011d1435df5d6d1229267277 196 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 4 194 43.362 T 18-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SHALO_2778 e8f554b1011d1435df5d6d1229267277 196 SUPERFAMILY SSF52096 12 192 1.12E-70 T 18-10-2018 IPR029045 ClpP/crotonase-like domain superfamily SHALO_2778 e8f554b1011d1435df5d6d1229267277 196 Gene3D G3DSA:3.90.226.10 1 195 2.3E-80 T 18-10-2018 SHALO_2624 4deb85d3f1736a2830d7e89d4d4ff29f 278 SUPERFAMILY SSF54534 43 249 5.7E-51 T 18-10-2018 SHALO_2624 4deb85d3f1736a2830d7e89d4d4ff29f 278 Gene3D G3DSA:1.10.287.460 34 141 3.0E-25 T 18-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 SHALO_2624 4deb85d3f1736a2830d7e89d4d4ff29f 278 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 160 247 7.4E-18 T 18-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain SHALO_2624 4deb85d3f1736a2830d7e89d4d4ff29f 278 Gene3D G3DSA:3.10.50.40 142 250 7.8E-30 T 18-10-2018 SHALO_2624 4deb85d3f1736a2830d7e89d4d4ff29f 278 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 37 153 4.5E-30 T 18-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 SHALO_0148 1e3cf6a90ecb1e7b9c973eacf77115a3 376 SUPERFAMILY SSF52091 7 96 3.73E-8 T 18-10-2018 IPR036513 STAS domain superfamily SHALO_0148 1e3cf6a90ecb1e7b9c973eacf77115a3 376 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 140 372 4.9E-82 T 18-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria SHALO_0148 1e3cf6a90ecb1e7b9c973eacf77115a3 376 Gene3D G3DSA:3.30.750.24 4 105 3.9E-5 T 18-10-2018 IPR036513 STAS domain superfamily SHALO_0148 1e3cf6a90ecb1e7b9c973eacf77115a3 376 Pfam PF02405 Permease MlaE 160 370 2.4E-71 T 18-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 SHALO_0925 db2f1246fe2ab1b24173f975829ef1a4 349 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 34 45 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_0925 db2f1246fe2ab1b24173f975829ef1a4 349 Pfam PF13534 4Fe-4S dicluster domain 2 49 1.1E-5 T 18-10-2018 SHALO_0925 db2f1246fe2ab1b24173f975829ef1a4 349 SUPERFAMILY SSF46548 22 60 3.4E-6 T 18-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 SHALO_0925 db2f1246fe2ab1b24173f975829ef1a4 349 Pfam PF02754 Cysteine-rich domain 218 297 1.4E-5 T 18-10-2018 IPR004017 Cysteine-rich domain SHALO_0925 db2f1246fe2ab1b24173f975829ef1a4 349 Pfam PF02754 Cysteine-rich domain 103 183 3.3E-7 T 18-10-2018 IPR004017 Cysteine-rich domain SHALO_2336 52a7f6cc3975a345067fba046538cbf7 1041 Gene3D G3DSA:1.20.1640.10 9 513 0.0 T 18-10-2018 SHALO_2336 52a7f6cc3975a345067fba046538cbf7 1041 SUPERFAMILY SSF82714 721 808 4.71E-21 T 18-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SHALO_2336 52a7f6cc3975a345067fba046538cbf7 1041 SUPERFAMILY SSF82866 297 498 1.29E-48 T 18-10-2018 SHALO_2336 52a7f6cc3975a345067fba046538cbf7 1041 Gene3D G3DSA:3.30.70.1320 134 331 0.0 T 18-10-2018 SHALO_2336 52a7f6cc3975a345067fba046538cbf7 1041 Gene3D G3DSA:3.30.2090.10 722 810 0.0 T 18-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SHALO_2336 52a7f6cc3975a345067fba046538cbf7 1041 Pfam PF00873 AcrB/AcrD/AcrF family 2 1025 0.0 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SHALO_2336 52a7f6cc3975a345067fba046538cbf7 1041 SUPERFAMILY SSF82693 39 132 2.51E-26 T 18-10-2018 SHALO_2336 52a7f6cc3975a345067fba046538cbf7 1041 SUPERFAMILY SSF82693 564 670 5.18E-28 T 18-10-2018 SHALO_2336 52a7f6cc3975a345067fba046538cbf7 1041 Gene3D G3DSA:3.30.70.1430 568 672 0.0 T 18-10-2018 SHALO_2336 52a7f6cc3975a345067fba046538cbf7 1041 Gene3D G3DSA:3.30.70.1440 673 862 0.0 T 18-10-2018 SHALO_2336 52a7f6cc3975a345067fba046538cbf7 1041 Gene3D G3DSA:3.30.70.1430 39 818 0.0 T 18-10-2018 SHALO_2336 52a7f6cc3975a345067fba046538cbf7 1041 Gene3D G3DSA:1.20.1640.10 514 1022 0.0 T 18-10-2018 SHALO_2336 52a7f6cc3975a345067fba046538cbf7 1041 SUPERFAMILY SSF82714 183 273 8.5E-22 T 18-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SHALO_2336 52a7f6cc3975a345067fba046538cbf7 1041 SUPERFAMILY SSF82693 671 855 6.54E-20 T 18-10-2018 SHALO_2336 52a7f6cc3975a345067fba046538cbf7 1041 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 3 1036 0.0 T 18-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 SHALO_2336 52a7f6cc3975a345067fba046538cbf7 1041 Gene3D G3DSA:3.30.2090.10 181 278 0.0 T 18-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SHALO_2336 52a7f6cc3975a345067fba046538cbf7 1041 SUPERFAMILY SSF82693 136 331 8.72E-24 T 18-10-2018 SHALO_2336 52a7f6cc3975a345067fba046538cbf7 1041 SUPERFAMILY SSF82866 840 1024 5.1E-41 T 18-10-2018 SHALO_2336 52a7f6cc3975a345067fba046538cbf7 1041 PRINTS PR00702 Acriflavin resistance protein family signature 392 416 5.0E-107 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SHALO_2336 52a7f6cc3975a345067fba046538cbf7 1041 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 5.0E-107 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SHALO_2336 52a7f6cc3975a345067fba046538cbf7 1041 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 5.0E-107 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SHALO_2336 52a7f6cc3975a345067fba046538cbf7 1041 PRINTS PR00702 Acriflavin resistance protein family signature 620 634 5.0E-107 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SHALO_2336 52a7f6cc3975a345067fba046538cbf7 1041 PRINTS PR00702 Acriflavin resistance protein family signature 446 469 5.0E-107 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SHALO_2336 52a7f6cc3975a345067fba046538cbf7 1041 PRINTS PR00702 Acriflavin resistance protein family signature 551 568 5.0E-107 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SHALO_2336 52a7f6cc3975a345067fba046538cbf7 1041 PRINTS PR00702 Acriflavin resistance protein family signature 364 385 5.0E-107 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SHALO_2336 52a7f6cc3975a345067fba046538cbf7 1041 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 5.0E-107 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SHALO_2336 52a7f6cc3975a345067fba046538cbf7 1041 PRINTS PR00702 Acriflavin resistance protein family signature 337 360 5.0E-107 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SHALO_0244 ecde6198c1a10698aa4fc2e586b7ba20 337 SUPERFAMILY SSF51735 3 170 1.48E-41 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_0244 ecde6198c1a10698aa4fc2e586b7ba20 337 Gene3D G3DSA:3.30.360.10 148 309 1.1E-107 T 18-10-2018 SHALO_0244 ecde6198c1a10698aa4fc2e586b7ba20 337 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 144 160 - T 18-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 SHALO_0244 ecde6198c1a10698aa4fc2e586b7ba20 337 SMART SM00859 5 141 3.2E-45 T 18-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 SHALO_0244 ecde6198c1a10698aa4fc2e586b7ba20 337 Gene3D G3DSA:3.40.50.720 8 326 1.1E-107 T 18-10-2018 SHALO_0244 ecde6198c1a10698aa4fc2e586b7ba20 337 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 4 331 37.358 T 18-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 SHALO_0244 ecde6198c1a10698aa4fc2e586b7ba20 337 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 5 337 2.3E-108 T 18-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 SHALO_0244 ecde6198c1a10698aa4fc2e586b7ba20 337 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 171 307 4.6E-14 T 18-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 SHALO_0244 ecde6198c1a10698aa4fc2e586b7ba20 337 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 141 5.7E-30 T 18-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 SHALO_0244 ecde6198c1a10698aa4fc2e586b7ba20 337 SUPERFAMILY SSF55347 149 305 3.38E-42 T 18-10-2018 SHALO_0044 f1c2c0164b2f3b5b5e3e628d04249835 330 Gene3D G3DSA:3.20.20.70 63 279 2.3E-32 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_0044 f1c2c0164b2f3b5b5e3e628d04249835 330 SUPERFAMILY SSF102114 46 307 4.84E-30 T 18-10-2018 SHALO_0044 f1c2c0164b2f3b5b5e3e628d04249835 330 PIRSF PIRSF004869 2 304 4.1E-92 T 18-10-2018 IPR016431 Pyruvate-formate lyase-activating enzyme, predicted SHALO_0044 f1c2c0164b2f3b5b5e3e628d04249835 330 TIGRFAM TIGR04337 AmmeMemoSam_rS: AmmeMemoRadiSam system radical SAM enzyme 5 329 2.6E-107 T 18-10-2018 IPR027596 AmmeMemoRadiSam system radical SAM enzyme SHALO_0044 f1c2c0164b2f3b5b5e3e628d04249835 330 Pfam PF04055 Radical SAM superfamily 76 222 2.8E-20 T 18-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 SHALO_0134 16ee43907f07319707a22ed2d59fbe93 165 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 4 165 21.164 T 18-10-2018 IPR007551 Protein of unknown function DUF520 SHALO_0134 16ee43907f07319707a22ed2d59fbe93 165 SUPERFAMILY SSF89963 94 165 1.02E-21 T 18-10-2018 IPR036183 YajQ-like superfamily SHALO_0134 16ee43907f07319707a22ed2d59fbe93 165 Gene3D G3DSA:3.30.70.860 6 164 8.0E-49 T 18-10-2018 IPR035571 UPF0234-like, C-terminal SHALO_0134 16ee43907f07319707a22ed2d59fbe93 165 Pfam PF04461 Protein of unknown function (DUF520) 5 165 8.0E-51 T 18-10-2018 IPR007551 Protein of unknown function DUF520 SHALO_0134 16ee43907f07319707a22ed2d59fbe93 165 Gene3D G3DSA:3.30.70.990 12 103 8.0E-49 T 18-10-2018 IPR035570 UPF0234, N-terminal SHALO_0134 16ee43907f07319707a22ed2d59fbe93 165 SUPERFAMILY SSF89963 5 92 9.15E-23 T 18-10-2018 IPR036183 YajQ-like superfamily SHALO_2356 23d593ed0c32432eebc6e39c4f82cb8d 223 SUPERFAMILY SSF52172 3 178 4.87E-32 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_2356 23d593ed0c32432eebc6e39c4f82cb8d 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 222 7.0E-23 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_2356 23d593ed0c32432eebc6e39c4f82cb8d 223 Gene3D G3DSA:1.10.10.10 127 223 4.6E-30 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_2356 23d593ed0c32432eebc6e39c4f82cb8d 223 Gene3D G3DSA:3.40.50.2300 1 126 9.6E-27 T 18-10-2018 SHALO_2356 23d593ed0c32432eebc6e39c4f82cb8d 223 SMART SM00862 147 222 4.0E-21 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_2356 23d593ed0c32432eebc6e39c4f82cb8d 223 Pfam PF00072 Response regulator receiver domain 5 114 5.6E-22 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_2356 23d593ed0c32432eebc6e39c4f82cb8d 223 SMART SM00448 3 114 3.5E-27 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_0945 05ff68f7b646d6c6ab3a162bde308c8e 273 Gene3D G3DSA:3.40.30.10 39 216 1.1E-37 T 18-10-2018 SHALO_0945 05ff68f7b646d6c6ab3a162bde308c8e 273 SUPERFAMILY SSF52833 45 195 5.1E-20 T 18-10-2018 IPR036249 Thioredoxin-like superfamily SHALO_0506 a053f223c086573d4902e1a2690800a8 627 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 4 619 3.0E-192 T 18-10-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0506 a053f223c086573d4902e1a2690800a8 627 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 73 127 6.9E-19 T 18-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0506 a053f223c086573d4902e1a2690800a8 627 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 116 136 7.0E-58 T 18-10-2018 SHALO_0506 a053f223c086573d4902e1a2690800a8 627 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 320 332 7.0E-58 T 18-10-2018 SHALO_0506 a053f223c086573d4902e1a2690800a8 627 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 88 113 7.0E-58 T 18-10-2018 SHALO_0506 a053f223c086573d4902e1a2690800a8 627 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 230 251 7.0E-58 T 18-10-2018 SHALO_0506 a053f223c086573d4902e1a2690800a8 627 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 252 278 7.0E-58 T 18-10-2018 SHALO_0506 a053f223c086573d4902e1a2690800a8 627 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 163 184 7.0E-58 T 18-10-2018 SHALO_0506 a053f223c086573d4902e1a2690800a8 627 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 422 441 7.0E-58 T 18-10-2018 SHALO_0506 a053f223c086573d4902e1a2690800a8 627 Pfam PF00361 Proton-conducting membrane transporter 143 429 5.7E-84 T 18-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0506 a053f223c086573d4902e1a2690800a8 627 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 363 385 2.8E-6 T 18-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 SHALO_0506 a053f223c086573d4902e1a2690800a8 627 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 421 443 2.8E-6 T 18-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 SHALO_0506 a053f223c086573d4902e1a2690800a8 627 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 11 30 2.8E-6 T 18-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 SHALO_1217 8506d2067474636afcf60722865b36da 408 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 382 389 - T 18-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 SHALO_1217 8506d2067474636afcf60722865b36da 408 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 48 6.6E-10 T 18-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 SHALO_1217 8506d2067474636afcf60722865b36da 408 Gene3D G3DSA:1.10.10.1330 70 194 1.2E-20 T 18-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily SHALO_1217 8506d2067474636afcf60722865b36da 408 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 9 401 1.0E-90 T 18-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 SHALO_1217 8506d2067474636afcf60722865b36da 408 PIRSF PIRSF000774 52 404 2.7E-63 T 18-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 SHALO_1217 8506d2067474636afcf60722865b36da 408 PIRSF PIRSF000774 1 69 9.5E-5 T 18-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 SHALO_1217 8506d2067474636afcf60722865b36da 408 PRINTS PR00045 Sigma-54 factor signature 377 395 2.2E-15 T 18-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 SHALO_1217 8506d2067474636afcf60722865b36da 408 PRINTS PR00045 Sigma-54 factor signature 305 317 2.2E-15 T 18-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 SHALO_1217 8506d2067474636afcf60722865b36da 408 PRINTS PR00045 Sigma-54 factor signature 321 332 2.2E-15 T 18-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 SHALO_1217 8506d2067474636afcf60722865b36da 408 PRINTS PR00045 Sigma-54 factor signature 137 154 2.2E-15 T 18-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 SHALO_1217 8506d2067474636afcf60722865b36da 408 Pfam PF04963 Sigma-54 factor, core binding domain 67 241 1.9E-28 T 18-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 SHALO_1217 8506d2067474636afcf60722865b36da 408 Pfam PF04552 Sigma-54, DNA binding domain 249 402 2.9E-44 T 18-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding SHALO_1217 8506d2067474636afcf60722865b36da 408 Gene3D G3DSA:1.10.10.60 342 401 8.4E-15 T 18-10-2018 SHALO_0324 904803494c06fcf24767870b1da425b1 62 Pfam PF05082 Rop-like 3 59 1.9E-11 T 18-10-2018 IPR007774 Putative nitrogen fixation protein SHALO_0104 237c5feaee74fb11b919538d12f7ccf1 252 Gene3D G3DSA:3.20.20.70 3 252 1.0E-110 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_0104 237c5feaee74fb11b919538d12f7ccf1 252 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 4 251 1.7E-113 T 18-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 SHALO_0104 237c5feaee74fb11b919538d12f7ccf1 252 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 3 251 49.235 T 18-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 SHALO_0104 237c5feaee74fb11b919538d12f7ccf1 252 Pfam PF00977 Histidine biosynthesis protein 7 234 4.0E-92 T 18-10-2018 IPR006062 Histidine biosynthesis GO:0000105 SHALO_0104 237c5feaee74fb11b919538d12f7ccf1 252 SUPERFAMILY SSF51366 5 251 2.12E-85 T 18-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 SHALO_1492 fba2c19ee0396291daf55a3df1620a45 356 Pfam PF00925 GTP cyclohydrolase II 304 347 2.9E-7 T 18-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 SHALO_1492 fba2c19ee0396291daf55a3df1620a45 356 Gene3D G3DSA:3.40.50.10990 219 352 1.2E-8 T 18-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 SHALO_1492 fba2c19ee0396291daf55a3df1620a45 356 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 19 208 2.0E-77 T 18-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 SHALO_1492 fba2c19ee0396291daf55a3df1620a45 356 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 12 213 36.852 T 18-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 SHALO_1492 fba2c19ee0396291daf55a3df1620a45 356 PIRSF PIRSF001259 12 305 2.6E-78 T 18-10-2018 SHALO_1492 fba2c19ee0396291daf55a3df1620a45 356 PIRSF PIRSF001259 298 355 4.7E-8 T 18-10-2018 SHALO_1492 fba2c19ee0396291daf55a3df1620a45 356 SUPERFAMILY SSF55821 13 212 4.35E-78 T 18-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily SHALO_1492 fba2c19ee0396291daf55a3df1620a45 356 Gene3D G3DSA:3.90.870.10 3 216 8.4E-81 T 18-10-2018 SHALO_1492 fba2c19ee0396291daf55a3df1620a45 356 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 14 209 1.5E-72 T 18-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 SHALO_1492 fba2c19ee0396291daf55a3df1620a45 356 SUPERFAMILY SSF142695 214 348 9.42E-20 T 18-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 SHALO_1165 3d0e69e8655dea6a962991cdfef80562 309 Gene3D G3DSA:1.10.10.60 200 308 9.8E-15 T 18-10-2018 SHALO_1165 3d0e69e8655dea6a962991cdfef80562 309 SUPERFAMILY SSF46689 263 306 3.76E-5 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SHALO_1165 3d0e69e8655dea6a962991cdfef80562 309 SUPERFAMILY SSF51215 58 186 4.45E-6 T 18-10-2018 IPR037923 Transcription regulator HTH-like SHALO_1165 3d0e69e8655dea6a962991cdfef80562 309 SMART SM00342 221 304 5.7E-4 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_1165 3d0e69e8655dea6a962991cdfef80562 309 Pfam PF12833 Helix-turn-helix domain 227 304 1.1E-10 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_2996 64b55baa8a26bc7fa0a3ed8c72336482 303 SUPERFAMILY SSF46785 3 112 4.26E-20 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SHALO_2996 64b55baa8a26bc7fa0a3ed8c72336482 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.6E-7 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SHALO_2996 64b55baa8a26bc7fa0a3ed8c72336482 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.6E-7 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SHALO_2996 64b55baa8a26bc7fa0a3ed8c72336482 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.6E-7 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SHALO_2996 64b55baa8a26bc7fa0a3ed8c72336482 303 Gene3D G3DSA:1.10.10.10 4 71 5.8E-21 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_2996 64b55baa8a26bc7fa0a3ed8c72336482 303 Gene3D G3DSA:3.40.190.290 94 300 2.0E-15 T 18-10-2018 SHALO_2996 64b55baa8a26bc7fa0a3ed8c72336482 303 Pfam PF03466 LysR substrate binding domain 96 296 1.4E-18 T 18-10-2018 IPR005119 LysR, substrate-binding SHALO_2996 64b55baa8a26bc7fa0a3ed8c72336482 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 1.4E-18 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SHALO_2996 64b55baa8a26bc7fa0a3ed8c72336482 303 SUPERFAMILY SSF53850 92 293 2.53E-21 T 18-10-2018 SHALO_1081 19fdcbe3813c29caa0132c4ab943895b 301 SUPERFAMILY SSF103481 192 294 2.35E-16 T 18-10-2018 SHALO_1081 19fdcbe3813c29caa0132c4ab943895b 301 Pfam PF00892 EamA-like transporter family 155 288 3.9E-23 T 18-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 SHALO_1081 19fdcbe3813c29caa0132c4ab943895b 301 Pfam PF00892 EamA-like transporter family 9 141 8.2E-23 T 18-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 SHALO_1081 19fdcbe3813c29caa0132c4ab943895b 301 SUPERFAMILY SSF103481 44 144 3.53E-15 T 18-10-2018 SHALO_1326 37af3eb19ff4ba1657709b5cf0a3b57f 402 Gene3D G3DSA:1.10.4160.10 1 399 4.0E-47 T 18-10-2018 IPR038271 Purine-cytosine permease superfamily SHALO_1326 37af3eb19ff4ba1657709b5cf0a3b57f 402 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 3 343 2.0E-32 T 18-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 SHALO_1326 37af3eb19ff4ba1657709b5cf0a3b57f 402 TIGRFAM TIGR02358 thia_cytX: putative hydroxymethylpyrimidine transporter CytX 12 387 9.3E-121 T 18-10-2018 IPR012732 Hydroxymethylpyrimidine transporter CytX SHALO_0185 e9ffbdb8f851e55c8ac89240e90e5518 408 Gene3D G3DSA:1.10.645.20 21 408 2.6E-154 T 18-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0185 e9ffbdb8f851e55c8ac89240e90e5518 408 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 17 408 46.03 T 18-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0185 e9ffbdb8f851e55c8ac89240e90e5518 408 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 136 408 9.4E-109 T 18-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0185 e9ffbdb8f851e55c8ac89240e90e5518 408 SUPERFAMILY SSF56762 32 408 3.53E-120 T 18-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0185 e9ffbdb8f851e55c8ac89240e90e5518 408 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 22 408 6.6E-183 T 18-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_2567 32674d142b2600454a6392978dc9c3df 224 Gene3D G3DSA:3.40.50.2300 1 121 2.9E-39 T 18-10-2018 SHALO_2567 32674d142b2600454a6392978dc9c3df 224 SMART SM00862 144 219 8.1E-14 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_2567 32674d142b2600454a6392978dc9c3df 224 SMART SM00448 1 112 8.2E-40 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_2567 32674d142b2600454a6392978dc9c3df 224 Pfam PF00072 Response regulator receiver domain 3 112 9.8E-28 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_2567 32674d142b2600454a6392978dc9c3df 224 Gene3D G3DSA:1.10.10.10 122 223 1.1E-22 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_2567 32674d142b2600454a6392978dc9c3df 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 218 5.3E-18 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_2567 32674d142b2600454a6392978dc9c3df 224 SUPERFAMILY SSF52172 1 178 6.55E-37 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_2253 c6bb85eb2388ef8f8445633d3e1b170f 472 Pfam PF00563 EAL domain 237 464 3.3E-56 T 18-10-2018 IPR001633 EAL domain SHALO_2253 c6bb85eb2388ef8f8445633d3e1b170f 472 SMART SM00052 230 472 1.5E-50 T 18-10-2018 IPR001633 EAL domain SHALO_2253 c6bb85eb2388ef8f8445633d3e1b170f 472 Gene3D G3DSA:3.20.20.450 232 470 1.5E-65 T 18-10-2018 IPR035919 EAL domain superfamily SHALO_2253 c6bb85eb2388ef8f8445633d3e1b170f 472 SUPERFAMILY SSF141868 237 466 5.23E-63 T 18-10-2018 IPR035919 EAL domain superfamily SHALO_2253 c6bb85eb2388ef8f8445633d3e1b170f 472 Gene3D G3DSA:3.30.70.270 68 231 2.5E-17 T 18-10-2018 SHALO_2253 c6bb85eb2388ef8f8445633d3e1b170f 472 Pfam PF00990 Diguanylate cyclase, GGDEF domain 68 211 4.2E-11 T 18-10-2018 IPR000160 GGDEF domain SHALO_2253 c6bb85eb2388ef8f8445633d3e1b170f 472 SMART SM00267 56 218 9.4E-7 T 18-10-2018 IPR000160 GGDEF domain SHALO_2253 c6bb85eb2388ef8f8445633d3e1b170f 472 SUPERFAMILY SSF55073 73 211 2.59E-14 T 18-10-2018 IPR029787 Nucleotide cyclase SHALO_1249 d02634c6c692d355c1eb2e811f659741 461 Gene3D G3DSA:1.10.10.10 3 75 1.9E-18 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_1249 d02634c6c692d355c1eb2e811f659741 461 Pfam PF00155 Aminotransferase class I and II 128 449 4.6E-19 T 18-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SHALO_1249 d02634c6c692d355c1eb2e811f659741 461 SUPERFAMILY SSF53383 68 455 1.32E-76 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase SHALO_1249 d02634c6c692d355c1eb2e811f659741 461 SMART SM00345 16 74 1.1E-10 T 18-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SHALO_1249 d02634c6c692d355c1eb2e811f659741 461 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 74 4.4E-12 T 18-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SHALO_1249 d02634c6c692d355c1eb2e811f659741 461 Gene3D G3DSA:3.40.640.10 90 449 2.7E-103 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 SHALO_1249 d02634c6c692d355c1eb2e811f659741 461 SUPERFAMILY SSF46785 5 77 5.62E-16 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SHALO_1110 38484d0ddb70498e21ad8b89524c3ce4 605 Pfam PF00271 Helicase conserved C-terminal domain 420 531 6.1E-11 T 18-10-2018 IPR001650 Helicase, C-terminal SHALO_1110 38484d0ddb70498e21ad8b89524c3ce4 605 SMART SM00487 227 407 3.8E-18 T 18-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain SHALO_1110 38484d0ddb70498e21ad8b89524c3ce4 605 Gene3D G3DSA:3.40.50.300 405 568 1.6E-34 T 18-10-2018 SHALO_1110 38484d0ddb70498e21ad8b89524c3ce4 605 SUPERFAMILY SSF50249 11 147 2.57E-6 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold SHALO_1110 38484d0ddb70498e21ad8b89524c3ce4 605 Pfam PF00270 DEAD/DEAH box helicase 233 384 2.1E-11 T 18-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SHALO_1110 38484d0ddb70498e21ad8b89524c3ce4 605 SMART SM00490 452 531 2.5E-10 T 18-10-2018 IPR001650 Helicase, C-terminal SHALO_1110 38484d0ddb70498e21ad8b89524c3ce4 605 SUPERFAMILY SSF52540 278 546 7.23E-38 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_1110 38484d0ddb70498e21ad8b89524c3ce4 605 Gene3D G3DSA:2.40.50.140 44 124 2.3E-5 T 18-10-2018 SHALO_1110 38484d0ddb70498e21ad8b89524c3ce4 605 Gene3D G3DSA:3.40.50.300 184 399 5.5E-49 T 18-10-2018 SHALO_1769 61200553bf400cbd7e8798790bb312c3 578 SUPERFAMILY SSF52833 3 129 4.36E-30 T 18-10-2018 IPR036249 Thioredoxin-like superfamily SHALO_1769 61200553bf400cbd7e8798790bb312c3 578 Gene3D G3DSA:3.40.30.10 1 172 1.6E-60 T 18-10-2018 SHALO_1769 61200553bf400cbd7e8798790bb312c3 578 Pfam PF03190 Protein of unknown function, DUF255 3 165 3.7E-63 T 18-10-2018 IPR004879 Domain of unknown function DUF255 SHALO_1769 61200553bf400cbd7e8798790bb312c3 578 PIRSF PIRSF006402 1 578 1.3E-174 T 18-10-2018 IPR024705 Spermatogenesis-associated protein 20 SHALO_1769 61200553bf400cbd7e8798790bb312c3 578 SUPERFAMILY SSF48208 191 511 9.64E-44 T 18-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 SHALO_2167 bd57c542ad4e136e06949ef6ea18e3c6 304 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 33 255 3.1E-46 T 18-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 SHALO_2167 bd57c542ad4e136e06949ef6ea18e3c6 304 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 62 73 7.4E-14 T 18-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 SHALO_2167 bd57c542ad4e136e06949ef6ea18e3c6 304 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 138 151 7.4E-14 T 18-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 SHALO_2167 bd57c542ad4e136e06949ef6ea18e3c6 304 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 110 127 7.4E-14 T 18-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 SHALO_2167 bd57c542ad4e136e06949ef6ea18e3c6 304 SUPERFAMILY SSF56601 1 267 8.08E-58 T 18-10-2018 IPR012338 Beta-lactamase/transpeptidase-like SHALO_2167 bd57c542ad4e136e06949ef6ea18e3c6 304 Gene3D G3DSA:3.40.710.10 14 304 1.7E-76 T 18-10-2018 SHALO_0518 b864cd8ff3475c466b9c23273c6abc52 417 SUPERFAMILY SSF55073 260 406 2.9E-16 T 18-10-2018 IPR029787 Nucleotide cyclase SHALO_0518 b864cd8ff3475c466b9c23273c6abc52 417 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 252 408 3.3E-11 T 18-10-2018 IPR000160 GGDEF domain SHALO_0518 b864cd8ff3475c466b9c23273c6abc52 417 Pfam PF00990 Diguanylate cyclase, GGDEF domain 253 404 2.7E-13 T 18-10-2018 IPR000160 GGDEF domain SHALO_0518 b864cd8ff3475c466b9c23273c6abc52 417 SMART SM00267 239 409 6.6E-7 T 18-10-2018 IPR000160 GGDEF domain SHALO_0518 b864cd8ff3475c466b9c23273c6abc52 417 Gene3D G3DSA:3.30.70.270 249 414 2.1E-19 T 18-10-2018 SHALO_1747 c50a03543f4d84a1093783e2beb10d0e 395 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 5 389 23.24 T 18-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 SHALO_1747 c50a03543f4d84a1093783e2beb10d0e 395 Gene3D G3DSA:1.20.1530.10 2 390 4.1E-146 T 18-10-2018 IPR023171 Na/H antiporter domain superfamily SHALO_1747 c50a03543f4d84a1093783e2beb10d0e 395 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 8 383 1.6E-146 T 18-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 SHALO_1747 c50a03543f4d84a1093783e2beb10d0e 395 Pfam PF06965 Na+/H+ antiporter 1 7 383 2.2E-147 T 18-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 SHALO_1105 e6e26e935f8a869710d8153e63dd7e28 428 Pfam PF00202 Aminotransferase class-III 34 416 2.3E-79 T 18-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SHALO_1105 e6e26e935f8a869710d8153e63dd7e28 428 Gene3D G3DSA:3.40.640.10 71 319 3.3E-167 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 SHALO_1105 e6e26e935f8a869710d8153e63dd7e28 428 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 5 427 100.992 T 18-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 SHALO_1105 e6e26e935f8a869710d8153e63dd7e28 428 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 235 271 - T 18-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SHALO_1105 e6e26e935f8a869710d8153e63dd7e28 428 SUPERFAMILY SSF53383 2 426 7.75E-126 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase SHALO_1105 e6e26e935f8a869710d8153e63dd7e28 428 Gene3D G3DSA:3.90.1150.10 9 419 3.3E-167 T 18-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 SHALO_1105 e6e26e935f8a869710d8153e63dd7e28 428 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 5 426 5.9E-189 T 18-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 SHALO_2539 1d833b0806c3c21c23e5b3e326e93bc5 305 SMART SM00342 215 298 1.4E-24 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_2539 1d833b0806c3c21c23e5b3e326e93bc5 305 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 267 282 1.0E-5 T 18-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SHALO_2539 1d833b0806c3c21c23e5b3e326e93bc5 305 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 282 298 1.0E-5 T 18-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SHALO_2539 1d833b0806c3c21c23e5b3e326e93bc5 305 SUPERFAMILY SSF46689 252 301 4.48E-12 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SHALO_2539 1d833b0806c3c21c23e5b3e326e93bc5 305 Gene3D G3DSA:1.10.10.60 197 303 5.3E-25 T 18-10-2018 SHALO_2539 1d833b0806c3c21c23e5b3e326e93bc5 305 Pfam PF12833 Helix-turn-helix domain 224 299 1.4E-19 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_2335 871b41e1ad9f0b4c30246122628b57c0 389 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 67 296 4.7E-14 T 18-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SHALO_2335 871b41e1ad9f0b4c30246122628b57c0 389 SUPERFAMILY SSF111369 57 301 6.15E-78 T 18-10-2018 SHALO_2335 871b41e1ad9f0b4c30246122628b57c0 389 Pfam PF00529 HlyD membrane-fusion protein of T1SS 44 363 1.2E-8 T 18-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 SHALO_2335 871b41e1ad9f0b4c30246122628b57c0 389 Gene3D G3DSA:2.40.420.20 307 376 1.7E-105 T 18-10-2018 SHALO_2335 871b41e1ad9f0b4c30246122628b57c0 389 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 46 378 1.1E-83 T 18-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 SHALO_2335 871b41e1ad9f0b4c30246122628b57c0 389 Gene3D G3DSA:2.40.30.170 56 306 1.7E-105 T 18-10-2018 SHALO_2335 871b41e1ad9f0b4c30246122628b57c0 389 Gene3D G3DSA:1.10.287.470 104 177 1.7E-105 T 18-10-2018 SHALO_2335 871b41e1ad9f0b4c30246122628b57c0 389 Gene3D G3DSA:2.40.50.100 69 213 1.7E-105 T 18-10-2018 SHALO_2908 5feb0b5cfac699b2dfc8310d9949c0d7 373 TIGRFAM TIGR03588 PseC: UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase 1 363 1.0E-146 T 18-10-2018 IPR020026 UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase SHALO_2908 5feb0b5cfac699b2dfc8310d9949c0d7 373 Gene3D G3DSA:3.40.640.10 1 241 1.0E-89 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 SHALO_2908 5feb0b5cfac699b2dfc8310d9949c0d7 373 SUPERFAMILY SSF53383 2 367 8.57E-111 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase SHALO_2908 5feb0b5cfac699b2dfc8310d9949c0d7 373 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 9 360 4.4E-112 T 18-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SHALO_2908 5feb0b5cfac699b2dfc8310d9949c0d7 373 Gene3D G3DSA:3.90.1150.10 243 369 5.7E-32 T 18-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 SHALO_2908 5feb0b5cfac699b2dfc8310d9949c0d7 373 PIRSF PIRSF000390 1 369 1.4E-107 T 18-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SHALO_2972 46bf4ec42e2c33f800291843293cd504 82 Gene3D G3DSA:3.30.1450.10 17 55 3.9E-5 T 18-10-2018 IPR037873 BamE-like SHALO_2972 46bf4ec42e2c33f800291843293cd504 82 Pfam PF07467 Beta-lactamase inhibitor (BLIP) 17 54 1.9E-5 T 18-10-2018 IPR009099 Beta-lactamase-inhibitor protein BLIP SHALO_0302 536d389e1d21c896b50048ab9896034f 328 SUPERFAMILY SSF103190 62 196 4.71E-6 T 18-10-2018 IPR029151 Periplasmic sensor-like domain superfamily SHALO_0302 536d389e1d21c896b50048ab9896034f 328 Pfam PF14827 Double sensory domain of two-component sensor kinase 51 214 1.9E-14 T 18-10-2018 IPR029150 Double Cache domain 3 SHALO_1043 044ce3486c11f246816ae08a38cc6725 3111 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1168 1257 4.0E-6 T 18-10-2018 IPR010221 VCBS repeat SHALO_1043 044ce3486c11f246816ae08a38cc6725 3111 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1288 1370 3.4E-9 T 18-10-2018 IPR010221 VCBS repeat SHALO_1043 044ce3486c11f246816ae08a38cc6725 3111 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 877 988 7.9E-12 T 18-10-2018 IPR010221 VCBS repeat SHALO_1043 044ce3486c11f246816ae08a38cc6725 3111 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1032 1108 4.4E-11 T 18-10-2018 IPR010221 VCBS repeat SHALO_1043 044ce3486c11f246816ae08a38cc6725 3111 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1683 1754 4.2E-4 T 18-10-2018 IPR010221 VCBS repeat SHALO_1043 044ce3486c11f246816ae08a38cc6725 3111 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 760 871 4.3E-13 T 18-10-2018 IPR010221 VCBS repeat SHALO_1043 044ce3486c11f246816ae08a38cc6725 3111 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1535 1618 8.3E-15 T 18-10-2018 IPR010221 VCBS repeat SHALO_1043 044ce3486c11f246816ae08a38cc6725 3111 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1375 1474 8.1E-14 T 18-10-2018 IPR010221 VCBS repeat SHALO_1043 044ce3486c11f246816ae08a38cc6725 3111 SMART SM00112 636 740 1.6 T 18-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 SHALO_1043 044ce3486c11f246816ae08a38cc6725 3111 SMART SM00112 1377 1464 0.023 T 18-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 SHALO_1043 044ce3486c11f246816ae08a38cc6725 3111 SMART SM00112 509 611 0.44 T 18-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 SHALO_1043 044ce3486c11f246816ae08a38cc6725 3111 SMART SM00112 205 302 0.45 T 18-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 SHALO_1043 044ce3486c11f246816ae08a38cc6725 3111 SUPERFAMILY SSF51120 2895 3016 1.7E-22 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_1043 044ce3486c11f246816ae08a38cc6725 3111 Gene3D G3DSA:2.150.10.10 2933 3080 1.8E-19 T 18-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_1043 044ce3486c11f246816ae08a38cc6725 3111 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2951 2968 0.0041 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_1043 044ce3486c11f246816ae08a38cc6725 3111 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2924 2941 9.3E-5 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_1043 044ce3486c11f246816ae08a38cc6725 3111 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2969 2986 0.035 T 18-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_1043 044ce3486c11f246816ae08a38cc6725 3111 Gene3D G3DSA:2.60.120.380 2042 2138 3.7E-5 T 18-10-2018 SHALO_1043 044ce3486c11f246816ae08a38cc6725 3111 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2948 2966 - T 18-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_1043 044ce3486c11f246816ae08a38cc6725 3111 PRINTS PR00313 NodO calcium binding signature 2934 2942 1.3E-9 T 18-10-2018 SHALO_1043 044ce3486c11f246816ae08a38cc6725 3111 PRINTS PR00313 NodO calcium binding signature 2979 2988 1.3E-9 T 18-10-2018 SHALO_1043 044ce3486c11f246816ae08a38cc6725 3111 PRINTS PR00313 NodO calcium binding signature 2952 2960 1.3E-9 T 18-10-2018 SHALO_1043 044ce3486c11f246816ae08a38cc6725 3111 PRINTS PR00313 NodO calcium binding signature 2922 2933 1.3E-9 T 18-10-2018 SHALO_1943 5cde8d5e319125cbd4fa73419b176ba7 112 SUPERFAMILY SSF82057 39 112 3.25E-25 T 18-10-2018 SHALO_1943 5cde8d5e319125cbd4fa73419b176ba7 112 Gene3D G3DSA:2.20.25.10 1 41 1.0E-18 T 18-10-2018 SHALO_1943 5cde8d5e319125cbd4fa73419b176ba7 112 SUPERFAMILY SSF57783 1 36 1.02E-13 T 18-10-2018 SHALO_1943 5cde8d5e319125cbd4fa73419b176ba7 112 Gene3D G3DSA:2.30.30.40 42 112 3.9E-31 T 18-10-2018 SHALO_1943 5cde8d5e319125cbd4fa73419b176ba7 112 Pfam PF03831 PhnA domain 44 112 1.2E-31 T 18-10-2018 IPR013988 PhnA protein, C-terminal SHALO_1943 5cde8d5e319125cbd4fa73419b176ba7 112 Pfam PF08274 PhnA Zinc-Ribbon 2 31 1.2E-13 T 18-10-2018 IPR013987 PhnA protein, N-terminal SHALO_1943 5cde8d5e319125cbd4fa73419b176ba7 112 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 2 112 1.2E-46 T 18-10-2018 IPR004624 PhnA protein SHALO_0050 24914f9c46382d098202440d53ec9b8d 428 Gene3D G3DSA:3.50.50.60 128 176 1.4E-5 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SHALO_0050 24914f9c46382d098202440d53ec9b8d 428 Pfam PF01946 Thi4 family 10 57 1.2E-6 T 18-10-2018 SHALO_0050 24914f9c46382d098202440d53ec9b8d 428 SUPERFAMILY SSF51905 9 426 2.7E-26 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SHALO_0050 24914f9c46382d098202440d53ec9b8d 428 PIRSF PIRSF038984 88 219 9.8E-9 T 18-10-2018 IPR028348 FAD dependent protein SHALO_0050 24914f9c46382d098202440d53ec9b8d 428 PIRSF PIRSF038984 223 428 5.5E-8 T 18-10-2018 IPR028348 FAD dependent protein SHALO_0050 24914f9c46382d098202440d53ec9b8d 428 PIRSF PIRSF038984 1 50 9.0E-4 T 18-10-2018 IPR028348 FAD dependent protein SHALO_0050 24914f9c46382d098202440d53ec9b8d 428 Gene3D G3DSA:3.50.50.60 6 112 1.3E-9 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SHALO_1816 b21e3de4f457cde6902dd48ad15afaa7 628 SMART SM00086 155 199 6.5E-10 T 18-10-2018 IPR001610 PAC motif SHALO_1816 b21e3de4f457cde6902dd48ad15afaa7 628 Gene3D G3DSA:3.30.70.270 205 377 8.7E-56 T 18-10-2018 SHALO_1816 b21e3de4f457cde6902dd48ad15afaa7 628 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 209 359 9.1E-42 T 18-10-2018 IPR000160 GGDEF domain SHALO_1816 b21e3de4f457cde6902dd48ad15afaa7 628 SMART SM00052 374 620 1.0E-99 T 18-10-2018 IPR001633 EAL domain SHALO_1816 b21e3de4f457cde6902dd48ad15afaa7 628 SUPERFAMILY SSF55785 87 201 1.24E-22 T 18-10-2018 IPR035965 PAS domain superfamily SHALO_1816 b21e3de4f457cde6902dd48ad15afaa7 628 SMART SM00267 200 364 1.4E-56 T 18-10-2018 IPR000160 GGDEF domain SHALO_1816 b21e3de4f457cde6902dd48ad15afaa7 628 Gene3D G3DSA:3.30.450.20 74 195 4.4E-30 T 18-10-2018 SHALO_1816 b21e3de4f457cde6902dd48ad15afaa7 628 Pfam PF00563 EAL domain 380 615 3.3E-72 T 18-10-2018 IPR001633 EAL domain SHALO_1816 b21e3de4f457cde6902dd48ad15afaa7 628 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 81 204 7.9E-12 T 18-10-2018 IPR000014 PAS domain SHALO_1816 b21e3de4f457cde6902dd48ad15afaa7 628 SMART SM00091 81 149 0.0038 T 18-10-2018 IPR000014 PAS domain SHALO_1816 b21e3de4f457cde6902dd48ad15afaa7 628 SUPERFAMILY SSF141868 380 627 1.16E-85 T 18-10-2018 IPR035919 EAL domain superfamily SHALO_1816 b21e3de4f457cde6902dd48ad15afaa7 628 Pfam PF08447 PAS fold 106 193 8.8E-21 T 18-10-2018 IPR013655 PAS fold-3 GO:0005515 SHALO_1816 b21e3de4f457cde6902dd48ad15afaa7 628 Gene3D G3DSA:3.20.20.450 378 628 1.2E-93 T 18-10-2018 IPR035919 EAL domain superfamily SHALO_1816 b21e3de4f457cde6902dd48ad15afaa7 628 SUPERFAMILY SSF55073 215 366 8.63E-45 T 18-10-2018 IPR029787 Nucleotide cyclase SHALO_1816 b21e3de4f457cde6902dd48ad15afaa7 628 Pfam PF00990 Diguanylate cyclase, GGDEF domain 210 358 5.7E-47 T 18-10-2018 IPR000160 GGDEF domain SHALO_2919 2e225ca79e33973cd14ccbdeb3879862 382 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 206 338 7.2E-19 T 18-10-2018 IPR006342 Methyltransferase FkbM SHALO_2919 2e225ca79e33973cd14ccbdeb3879862 382 Pfam PF05050 Methyltransferase FkbM domain 221 352 1.2E-15 T 18-10-2018 IPR006342 Methyltransferase FkbM SHALO_2919 2e225ca79e33973cd14ccbdeb3879862 382 Gene3D G3DSA:3.40.50.150 186 378 2.0E-37 T 18-10-2018 SHALO_2919 2e225ca79e33973cd14ccbdeb3879862 382 SUPERFAMILY SSF53335 9 377 7.69E-55 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_0918 e6eabbcef28ec2a192a54e86f4d581cf 236 Pfam PF04172 LrgB-like family 21 233 5.2E-68 T 18-10-2018 IPR007300 CidB/LrgB family SHALO_1313 482b5d0af57fafb42106ece58ce59d79 465 Gene3D G3DSA:3.40.50.300 188 374 4.8E-70 T 18-10-2018 SHALO_1313 482b5d0af57fafb42106ece58ce59d79 465 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 415 424 - T 18-10-2018 IPR025944 Sigma-54 interaction domain, conserved site SHALO_1313 482b5d0af57fafb42106ece58ce59d79 465 SUPERFAMILY SSF55781 14 169 3.27E-20 T 18-10-2018 SHALO_1313 482b5d0af57fafb42106ece58ce59d79 465 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 227 240 - T 18-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 SHALO_1313 482b5d0af57fafb42106ece58ce59d79 465 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 289 304 - T 18-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 SHALO_1313 482b5d0af57fafb42106ece58ce59d79 465 Pfam PF13185 GAF domain 81 169 7.7E-8 T 18-10-2018 IPR003018 GAF domain GO:0005515 SHALO_1313 482b5d0af57fafb42106ece58ce59d79 465 SMART SM00382 223 366 6.4E-10 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_1313 482b5d0af57fafb42106ece58ce59d79 465 SMART SM00065 32 179 9.8E-9 T 18-10-2018 IPR003018 GAF domain GO:0005515 SHALO_1313 482b5d0af57fafb42106ece58ce59d79 465 Gene3D G3DSA:3.30.450.40 11 181 1.1E-33 T 18-10-2018 IPR029016 GAF-like domain superfamily SHALO_1313 482b5d0af57fafb42106ece58ce59d79 465 Gene3D G3DSA:1.10.8.60 375 447 4.0E-23 T 18-10-2018 SHALO_1313 482b5d0af57fafb42106ece58ce59d79 465 Pfam PF00158 Sigma-54 interaction domain 203 369 1.6E-74 T 18-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SHALO_1313 482b5d0af57fafb42106ece58ce59d79 465 SUPERFAMILY SSF52540 202 442 5.13E-73 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_1999 88e7d3257561ea9039fb9c262e960451 815 Gene3D G3DSA:3.10.20.590 755 815 6.8E-17 T 18-10-2018 SHALO_1999 88e7d3257561ea9039fb9c262e960451 815 Pfam PF09334 tRNA synthetases class I (M) 34 174 2.0E-21 T 18-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_1999 88e7d3257561ea9039fb9c262e960451 815 Gene3D G3DSA:3.40.50.620 32 580 4.0E-224 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_1999 88e7d3257561ea9039fb9c262e960451 815 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 422 623 1.1E-22 T 18-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_1999 88e7d3257561ea9039fb9c262e960451 815 SUPERFAMILY SSF47323 628 815 1.81E-19 T 18-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_1999 88e7d3257561ea9039fb9c262e960451 815 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 3 580 3.4E-252 T 18-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 SHALO_1999 88e7d3257561ea9039fb9c262e960451 815 Gene3D G3DSA:1.10.730.10 604 747 8.9E-31 T 18-10-2018 SHALO_1999 88e7d3257561ea9039fb9c262e960451 815 SUPERFAMILY SSF52374 1 632 1.38E-139 T 18-10-2018 SHALO_1999 88e7d3257561ea9039fb9c262e960451 815 Gene3D G3DSA:3.90.740.10 227 420 4.0E-224 T 18-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 SHALO_1999 88e7d3257561ea9039fb9c262e960451 815 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 2 814 20.929 T 18-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 SHALO_1999 88e7d3257561ea9039fb9c262e960451 815 Gene3D G3DSA:2.30.210.10 581 592 4.0E-224 T 18-10-2018 SHALO_1999 88e7d3257561ea9039fb9c262e960451 815 SUPERFAMILY SSF50677 225 420 5.13E-44 T 18-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 SHALO_1999 88e7d3257561ea9039fb9c262e960451 815 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 40 51 - T 18-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_1999 88e7d3257561ea9039fb9c262e960451 815 PRINTS PR00985 Leucyl-tRNA synthetase signature 566 576 1.9E-40 T 18-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 SHALO_1999 88e7d3257561ea9039fb9c262e960451 815 PRINTS PR00985 Leucyl-tRNA synthetase signature 125 142 1.9E-40 T 18-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 SHALO_1999 88e7d3257561ea9039fb9c262e960451 815 PRINTS PR00985 Leucyl-tRNA synthetase signature 151 167 1.9E-40 T 18-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 SHALO_1999 88e7d3257561ea9039fb9c262e960451 815 PRINTS PR00985 Leucyl-tRNA synthetase signature 214 233 1.9E-40 T 18-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 SHALO_1999 88e7d3257561ea9039fb9c262e960451 815 PRINTS PR00985 Leucyl-tRNA synthetase signature 492 510 1.9E-40 T 18-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 SHALO_1999 88e7d3257561ea9039fb9c262e960451 815 PRINTS PR00985 Leucyl-tRNA synthetase signature 183 196 1.9E-40 T 18-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 SHALO_1999 88e7d3257561ea9039fb9c262e960451 815 PRINTS PR00985 Leucyl-tRNA synthetase signature 533 555 1.9E-40 T 18-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 SHALO_1999 88e7d3257561ea9039fb9c262e960451 815 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 220 408 7.9E-59 T 18-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 SHALO_2159 4681a7761e97d275f79ad96fa52d9d81 273 Gene3D G3DSA:3.90.1170.20 3 264 2.9E-66 T 18-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 SHALO_2159 4681a7761e97d275f79ad96fa52d9d81 273 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 98 267 5.5E-33 T 18-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 SHALO_2159 4681a7761e97d275f79ad96fa52d9d81 273 Gene3D G3DSA:3.20.20.70 114 260 2.9E-66 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_2159 4681a7761e97d275f79ad96fa52d9d81 273 SUPERFAMILY SSF54675 3 97 1.81E-18 T 18-10-2018 SHALO_2159 4681a7761e97d275f79ad96fa52d9d81 273 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 10 96 2.9E-18 T 18-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 SHALO_2159 4681a7761e97d275f79ad96fa52d9d81 273 TIGRFAM TIGR01334 modD: modD protein 3 269 4.2E-71 T 18-10-2018 IPR006242 Putative pyrophosphorylase ModD GO:0016763 SHALO_2159 4681a7761e97d275f79ad96fa52d9d81 273 SUPERFAMILY SSF51690 98 267 9.42E-40 T 18-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 SHALO_2159 4681a7761e97d275f79ad96fa52d9d81 273 PIRSF PIRSF006250 1 272 7.1E-64 T 18-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 SHALO_2855 f8fdead72ba20ee8a786c717f62d954f 268 SUPERFAMILY SSF69572 2 251 2.22E-96 T 18-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 SHALO_2855 f8fdead72ba20ee8a786c717f62d954f 268 Pfam PF00899 ThiF family 12 246 1.2E-65 T 18-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 SHALO_2855 f8fdead72ba20ee8a786c717f62d954f 268 Gene3D G3DSA:3.40.50.720 4 256 1.3E-93 T 18-10-2018 SHALO_2698 ded4edd72462f8b55e7a9981db62bc83 188 Pfam PF04264 YceI-like domain 22 183 2.9E-41 T 18-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SHALO_2698 ded4edd72462f8b55e7a9981db62bc83 188 SMART SM00867 21 185 4.6E-65 T 18-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SHALO_2698 ded4edd72462f8b55e7a9981db62bc83 188 Gene3D G3DSA:2.40.128.110 21 186 2.1E-48 T 18-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily SHALO_2698 ded4edd72462f8b55e7a9981db62bc83 188 SUPERFAMILY SSF101874 20 185 3.4E-51 T 18-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily SHALO_1602 304cdcde3e4708373d09c4cd6a8a44d7 156 Pfam PF10369 Small subunit of acetolactate synthase 85 154 3.9E-13 T 18-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 SHALO_1602 304cdcde3e4708373d09c4cd6a8a44d7 156 Gene3D G3DSA:3.30.70.1150 84 156 7.2E-10 T 18-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal SHALO_1602 304cdcde3e4708373d09c4cd6a8a44d7 156 SUPERFAMILY SSF55021 5 77 2.06E-18 T 18-10-2018 SHALO_1602 304cdcde3e4708373d09c4cd6a8a44d7 156 Gene3D G3DSA:3.30.70.260 3 80 9.1E-28 T 18-10-2018 SHALO_1602 304cdcde3e4708373d09c4cd6a8a44d7 156 Pfam PF01842 ACT domain 7 71 1.4E-12 T 18-10-2018 IPR002912 ACT domain SHALO_1602 304cdcde3e4708373d09c4cd6a8a44d7 156 SUPERFAMILY SSF55021 78 154 1.68E-16 T 18-10-2018 SHALO_1602 304cdcde3e4708373d09c4cd6a8a44d7 156 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 5 154 2.3E-40 T 18-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 SHALO_1602 304cdcde3e4708373d09c4cd6a8a44d7 156 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 4 78 2.0E-26 T 18-10-2018 SHALO_1455 852f36091cb58ffce9175ad55274f19a 148 Gene3D G3DSA:1.10.1510.10 1 91 9.5E-25 T 18-10-2018 SHALO_1455 852f36091cb58ffce9175ad55274f19a 148 Gene3D G3DSA:1.10.10.410 92 147 5.2E-15 T 18-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal SHALO_1455 852f36091cb58ffce9175ad55274f19a 148 Pfam PF09424 Yqey-like protein 5 147 3.2E-45 T 18-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 SHALO_1455 852f36091cb58ffce9175ad55274f19a 148 SUPERFAMILY SSF89095 4 147 3.87E-34 T 18-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 SHALO_1298 20829bc2839cc8ae80a529d023a0fbc7 187 Gene3D G3DSA:1.10.3210.10 2 139 1.1E-8 T 18-10-2018 SHALO_1298 20829bc2839cc8ae80a529d023a0fbc7 187 Pfam PF01966 HD domain 21 86 8.9E-5 T 18-10-2018 IPR006674 HD domain SHALO_1298 20829bc2839cc8ae80a529d023a0fbc7 187 TIGRFAM TIGR00277 HDIG: HDIG domain 20 86 4.8E-8 T 18-10-2018 IPR006675 HDIG domain SHALO_1298 20829bc2839cc8ae80a529d023a0fbc7 187 SUPERFAMILY SSF109604 5 151 5.5E-16 T 18-10-2018 SHALO_2622 3dc874baf1ab06ae37252b0c40c480e7 320 Pfam PF03916 Polysulphide reductase, NrfD 13 318 3.5E-62 T 18-10-2018 IPR005614 NrfD family SHALO_2622 3dc874baf1ab06ae37252b0c40c480e7 320 Gene3D G3DSA:1.20.1630.10 7 230 2.4E-15 T 18-10-2018 SHALO_2398 d3d5c5bd28b196355934f5bbcba07f4c 606 Gene3D G3DSA:3.30.450.20 48 158 1.2E-47 T 18-10-2018 SHALO_2398 d3d5c5bd28b196355934f5bbcba07f4c 606 SMART SM00304 275 329 1.1E-9 T 18-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 SHALO_2398 d3d5c5bd28b196355934f5bbcba07f4c 606 SMART SM00283 330 605 1.2E-38 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_2398 d3d5c5bd28b196355934f5bbcba07f4c 606 Gene3D G3DSA:3.30.450.20 35 248 1.2E-47 T 18-10-2018 SHALO_2398 d3d5c5bd28b196355934f5bbcba07f4c 606 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 424 539 2.1E-33 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_2398 d3d5c5bd28b196355934f5bbcba07f4c 606 SUPERFAMILY SSF58104 297 605 6.67E-57 T 18-10-2018 SHALO_2398 d3d5c5bd28b196355934f5bbcba07f4c 606 Gene3D G3DSA:1.10.287.950 274 606 8.2E-58 T 18-10-2018 SHALO_2398 d3d5c5bd28b196355934f5bbcba07f4c 606 Pfam PF02743 Cache domain 23 234 3.8E-32 T 18-10-2018 IPR033479 Double Cache domain 1 SHALO_2398 d3d5c5bd28b196355934f5bbcba07f4c 606 SUPERFAMILY SSF103190 57 169 2.88E-15 T 18-10-2018 IPR029151 Periplasmic sensor-like domain superfamily SHALO_0491 8978ad0748113539d5a1321d7ff84b3d 423 Pfam PF00881 Nitroreductase family 274 422 1.1E-7 T 18-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 SHALO_0491 8978ad0748113539d5a1321d7ff84b3d 423 Gene3D G3DSA:3.40.109.10 4 422 2.9E-84 T 18-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 SHALO_0491 8978ad0748113539d5a1321d7ff84b3d 423 TIGRFAM TIGR03605 antibiot_sagB: SagB-type dehydrogenase domain 52 206 1.0E-22 T 18-10-2018 IPR020051 SagB-type dehydrogenase domain SHALO_0491 8978ad0748113539d5a1321d7ff84b3d 423 SUPERFAMILY SSF55469 268 422 2.75E-11 T 18-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 SHALO_0491 8978ad0748113539d5a1321d7ff84b3d 423 Gene3D G3DSA:3.40.109.10 21 245 2.9E-84 T 18-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 SHALO_1354 e2050a03d112afc9e9c70f938bd9c143 432 PIRSF PIRSF006444 1 432 2.2E-197 T 18-10-2018 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716 SHALO_1354 e2050a03d112afc9e9c70f938bd9c143 432 Gene3D G3DSA:3.30.300.30 328 431 1.4E-31 T 18-10-2018 SHALO_1354 e2050a03d112afc9e9c70f938bd9c143 432 SUPERFAMILY SSF56801 19 394 1.11E-57 T 18-10-2018 SHALO_1354 e2050a03d112afc9e9c70f938bd9c143 432 Gene3D G3DSA:3.40.50.12780 1 327 1.4E-119 T 18-10-2018 SHALO_1354 e2050a03d112afc9e9c70f938bd9c143 432 Pfam PF14535 AMP-binding enzyme C-terminal domain 334 430 2.0E-29 T 18-10-2018 IPR028154 AMP-dependent ligase, C-terminal SHALO_1354 e2050a03d112afc9e9c70f938bd9c143 432 Pfam PF00501 AMP-binding enzyme 77 286 1.8E-13 T 18-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 SHALO_1847 8aac20670764c107122da4dcd959f924 368 Gene3D G3DSA:3.90.550.10 1 198 5.8E-44 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_1847 8aac20670764c107122da4dcd959f924 368 SUPERFAMILY SSF53448 6 197 1.78E-25 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_1847 8aac20670764c107122da4dcd959f924 368 Pfam PF12804 MobA-like NTP transferase domain 8 166 3.5E-31 T 18-10-2018 IPR025877 MobA-like NTP transferase SHALO_1847 8aac20670764c107122da4dcd959f924 368 Gene3D G3DSA:1.10.3210.10 204 346 6.9E-8 T 18-10-2018 SHALO_1847 8aac20670764c107122da4dcd959f924 368 SUPERFAMILY SSF109604 207 314 8.37E-12 T 18-10-2018 SHALO_3007 94c556c26c52468bb57d216e73ffeccb 186 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 186 1.2E-70 T 18-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 SHALO_3007 94c556c26c52468bb57d216e73ffeccb 186 Gene3D G3DSA:3.30.1360.40 32 106 4.8E-60 T 18-10-2018 SHALO_3007 94c556c26c52468bb57d216e73ffeccb 186 Pfam PF01765 Ribosome recycling factor 21 184 1.2E-56 T 18-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 SHALO_3007 94c556c26c52468bb57d216e73ffeccb 186 Gene3D G3DSA:1.10.132.20 14 183 4.8E-60 T 18-10-2018 SHALO_3007 94c556c26c52468bb57d216e73ffeccb 186 SUPERFAMILY SSF55194 5 185 9.55E-64 T 18-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 SHALO_3007 94c556c26c52468bb57d216e73ffeccb 186 Hamap MF_00040 Ribosome-recycling factor [frr]. 4 186 24.603 T 18-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 SHALO_2210 83202e25ae0cff892e2db791a9e91d33 720 Pfam PF02516 Oligosaccharyl transferase STT3 subunit 40 480 8.9E-39 T 18-10-2018 IPR003674 Oligosaccharyl transferase, STT3 subunit GO:0004576|GO:0006486|GO:0016020 SHALO_2210 83202e25ae0cff892e2db791a9e91d33 720 Gene3D G3DSA:3.40.1380.40 426 591 6.2E-61 T 18-10-2018 SHALO_2896 3f7a55e2af47a5bb5767089b62290cf3 467 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 8 19 - T 18-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_2896 3f7a55e2af47a5bb5767089b62290cf3 467 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 2 456 1.6E-165 T 18-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 SHALO_2896 3f7a55e2af47a5bb5767089b62290cf3 467 Gene3D G3DSA:3.40.50.620 1 314 4.1E-126 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_2896 3f7a55e2af47a5bb5767089b62290cf3 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 5 17 1.8E-23 T 18-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 SHALO_2896 3f7a55e2af47a5bb5767089b62290cf3 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 19 30 1.8E-23 T 18-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 SHALO_2896 3f7a55e2af47a5bb5767089b62290cf3 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 195 203 1.8E-23 T 18-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 SHALO_2896 3f7a55e2af47a5bb5767089b62290cf3 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 34 47 1.8E-23 T 18-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 SHALO_2896 3f7a55e2af47a5bb5767089b62290cf3 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 179 189 1.8E-23 T 18-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 SHALO_2896 3f7a55e2af47a5bb5767089b62290cf3 467 Gene3D G3DSA:1.10.10.350 364 464 3.0E-18 T 18-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 SHALO_2896 3f7a55e2af47a5bb5767089b62290cf3 467 SUPERFAMILY SSF52374 2 296 2.36E-105 T 18-10-2018 SHALO_2896 3f7a55e2af47a5bb5767089b62290cf3 467 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 2 305 1.0E-100 T 18-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 SHALO_2896 3f7a55e2af47a5bb5767089b62290cf3 467 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 1 458 30.236 T 18-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 SHALO_2896 3f7a55e2af47a5bb5767089b62290cf3 467 SUPERFAMILY SSF48163 299 457 1.31E-30 T 18-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 SHALO_2692 b13a6d567d7f9b6df9ebeb597385cc80 611 Pfam PF00009 Elongation factor Tu GTP binding domain 5 164 4.4E-30 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHALO_2692 b13a6d567d7f9b6df9ebeb597385cc80 611 SUPERFAMILY SSF50447 174 263 3.34E-17 T 18-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily SHALO_2692 b13a6d567d7f9b6df9ebeb597385cc80 611 SUPERFAMILY SSF52540 5 193 3.2E-40 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_2692 b13a6d567d7f9b6df9ebeb597385cc80 611 Gene3D G3DSA:1.10.10.10 553 611 3.1E-6 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_2692 b13a6d567d7f9b6df9ebeb597385cc80 611 Gene3D G3DSA:3.40.50.300 1 170 8.4E-46 T 18-10-2018 SHALO_2692 b13a6d567d7f9b6df9ebeb597385cc80 611 Gene3D G3DSA:2.40.30.10 174 289 2.6E-21 T 18-10-2018 SHALO_2692 b13a6d567d7f9b6df9ebeb597385cc80 611 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 29 44 - T 18-10-2018 IPR031157 Tr-type G domain, conserved site SHALO_2692 b13a6d567d7f9b6df9ebeb597385cc80 611 SUPERFAMILY SSF46785 560 610 8.71E-7 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SHALO_2692 b13a6d567d7f9b6df9ebeb597385cc80 611 Pfam PF09107 Elongation factor SelB, winged helix 566 610 7.0E-10 T 18-10-2018 IPR015191 Translation elongation factor SelB, winged helix, type 3 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 SHALO_2692 b13a6d567d7f9b6df9ebeb597385cc80 611 SUPERFAMILY SSF50465 280 354 4.32E-8 T 18-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal SHALO_2692 b13a6d567d7f9b6df9ebeb597385cc80 611 TIGRFAM TIGR00475 selB: selenocysteine-specific translation elongation factor 5 610 2.3E-87 T 18-10-2018 IPR004535 Translation elongation factor, selenocysteine-specific GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 SHALO_2692 b13a6d567d7f9b6df9ebeb597385cc80 611 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 126 1.4E-12 T 18-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 SHALO_0049 65c194ab5d3ed87989afb898e1dd293b 188 Gene3D G3DSA:3.40.50.1820 1 187 3.0E-56 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold SHALO_0049 65c194ab5d3ed87989afb898e1dd293b 188 SUPERFAMILY SSF53474 2 183 1.76E-19 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold SHALO_0049 65c194ab5d3ed87989afb898e1dd293b 188 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 182 2.3E-43 T 18-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA SHALO_0580 f695ae65fb2a70ffd05ea6a1d44863d7 214 ProDom PD032436 LIPOPROTEIN UNCHARACTERIZED PROBABLE CJ0457C SIMILAR TRANSFERASE BACTERIA PRECURSOR SIGNAL CC0304 17 138 9.0E-25 T 18-10-2018 IPR007172 Domain of unknown function DUF374 SHALO_0580 f695ae65fb2a70ffd05ea6a1d44863d7 214 Pfam PF04028 Domain of unknown function (DUF374) 76 137 3.0E-25 T 18-10-2018 IPR007172 Domain of unknown function DUF374 SHALO_0043 4920663079d2cbaaa8bbee473561ad9a 264 TIGRFAM TIGR04336 AmmeMemoSam_B: AmmeMemoRadiSam system protein B 5 262 5.4E-76 T 18-10-2018 SHALO_0043 4920663079d2cbaaa8bbee473561ad9a 264 Pfam PF01875 Memo-like protein 7 261 3.3E-49 T 18-10-2018 IPR002737 MEMO1 family Reactome: R-HSA-6785631 SHALO_0043 4920663079d2cbaaa8bbee473561ad9a 264 Gene3D G3DSA:3.40.830.10 3 264 3.2E-57 T 18-10-2018 SHALO_0043 4920663079d2cbaaa8bbee473561ad9a 264 Hamap MF_00055 MEMO1 family protein . 3 264 47.859 T 18-10-2018 IPR002737 MEMO1 family Reactome: R-HSA-6785631 SHALO_0231 f99ddfe9445153f7523d65ecbd957778 263 Gene3D G3DSA:2.160.10.10 1 190 1.7E-48 T 18-10-2018 SHALO_0231 f99ddfe9445153f7523d65ecbd957778 263 SUPERFAMILY SSF51161 3 254 5.94E-70 T 18-10-2018 IPR011004 Trimeric LpxA-like superfamily SHALO_0231 f99ddfe9445153f7523d65ecbd957778 263 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 149 177 - T 18-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 SHALO_0231 f99ddfe9445153f7523d65ecbd957778 263 Gene3D G3DSA:1.20.1180.10 194 263 4.0E-19 T 18-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 SHALO_0231 f99ddfe9445153f7523d65ecbd957778 263 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 176 254 7.1E-23 T 18-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 SHALO_0231 f99ddfe9445153f7523d65ecbd957778 263 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 1 256 42.659 T 18-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 SHALO_0231 f99ddfe9445153f7523d65ecbd957778 263 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 32 65 8.7E-5 T 18-10-2018 IPR001451 Hexapeptide repeat SHALO_0231 f99ddfe9445153f7523d65ecbd957778 263 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 3 29 2.2E-4 T 18-10-2018 IPR001451 Hexapeptide repeat SHALO_0231 f99ddfe9445153f7523d65ecbd957778 263 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 105 139 1.9E-7 T 18-10-2018 IPR001451 Hexapeptide repeat SHALO_0231 f99ddfe9445153f7523d65ecbd957778 263 PIRSF PIRSF000456 1 263 1.1E-98 T 18-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 SHALO_0231 f99ddfe9445153f7523d65ecbd957778 263 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 4 254 1.0E-99 T 18-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 SHALO_0963 26fdde4386ef4368f18210bcda162643 158 Pfam PF04542 Sigma-70 region 2 3 64 4.4E-6 T 18-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 SHALO_0963 26fdde4386ef4368f18210bcda162643 158 SUPERFAMILY SSF88946 2 83 6.67E-10 T 18-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 SHALO_0963 26fdde4386ef4368f18210bcda162643 158 SUPERFAMILY SSF88659 84 151 2.06E-14 T 18-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like SHALO_0963 26fdde4386ef4368f18210bcda162643 158 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 3 150 1.9E-18 T 18-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 SHALO_0963 26fdde4386ef4368f18210bcda162643 158 Gene3D G3DSA:1.10.1740.10 1 66 1.2E-7 T 18-10-2018 SHALO_0963 26fdde4386ef4368f18210bcda162643 158 Pfam PF08281 Sigma-70, region 4 97 143 1.9E-14 T 18-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHALO_0963 26fdde4386ef4368f18210bcda162643 158 Gene3D G3DSA:1.10.10.10 75 155 2.2E-16 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_2009 ffe44fa5acb63a0d0491de031c372b87 199 SUPERFAMILY SSF52833 1 169 3.66E-13 T 18-10-2018 IPR036249 Thioredoxin-like superfamily SHALO_2009 ffe44fa5acb63a0d0491de031c372b87 199 ProSitePatterns PS00194 Thioredoxin family active site. 69 87 - T 18-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 SHALO_2009 ffe44fa5acb63a0d0491de031c372b87 199 Gene3D G3DSA:3.40.30.10 23 178 2.9E-11 T 18-10-2018 SHALO_0572 efdc706d8dbe229fc7f191ae32a2cfba 399 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 2.6E-86 T 18-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_0572 efdc706d8dbe229fc7f191ae32a2cfba 399 PRINTS PR00477 Phosphoglycerate kinase family signature 315 340 2.6E-86 T 18-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_0572 efdc706d8dbe229fc7f191ae32a2cfba 399 PRINTS PR00477 Phosphoglycerate kinase family signature 371 388 2.6E-86 T 18-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_0572 efdc706d8dbe229fc7f191ae32a2cfba 399 PRINTS PR00477 Phosphoglycerate kinase family signature 348 359 2.6E-86 T 18-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_0572 efdc706d8dbe229fc7f191ae32a2cfba 399 PRINTS PR00477 Phosphoglycerate kinase family signature 109 124 2.6E-86 T 18-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_0572 efdc706d8dbe229fc7f191ae32a2cfba 399 PRINTS PR00477 Phosphoglycerate kinase family signature 9 25 2.6E-86 T 18-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_0572 efdc706d8dbe229fc7f191ae32a2cfba 399 PRINTS PR00477 Phosphoglycerate kinase family signature 137 159 2.6E-86 T 18-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_0572 efdc706d8dbe229fc7f191ae32a2cfba 399 PRINTS PR00477 Phosphoglycerate kinase family signature 170 192 2.6E-86 T 18-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_0572 efdc706d8dbe229fc7f191ae32a2cfba 399 PRINTS PR00477 Phosphoglycerate kinase family signature 193 212 2.6E-86 T 18-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_0572 efdc706d8dbe229fc7f191ae32a2cfba 399 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 14 24 - T 18-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_0572 efdc706d8dbe229fc7f191ae32a2cfba 399 SUPERFAMILY SSF53748 3 395 1.65E-145 T 18-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_0572 efdc706d8dbe229fc7f191ae32a2cfba 399 Gene3D G3DSA:3.40.50.1260 7 393 7.1E-153 T 18-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_0572 efdc706d8dbe229fc7f191ae32a2cfba 399 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 7 395 39.478 T 18-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_0572 efdc706d8dbe229fc7f191ae32a2cfba 399 Gene3D G3DSA:3.40.50.1260 172 385 7.1E-153 T 18-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_0572 efdc706d8dbe229fc7f191ae32a2cfba 399 Pfam PF00162 Phosphoglycerate kinase 5 385 1.5E-151 T 18-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_0572 efdc706d8dbe229fc7f191ae32a2cfba 399 PIRSF PIRSF000724 1 399 2.5E-146 T 18-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_2483 7ca6c4a277070160d5743ed833744cb2 245 Pfam PF05448 Acetyl xylan esterase (AXE1) 19 152 9.6E-10 T 18-10-2018 IPR008391 Acetyl xylan esterase SHALO_2483 7ca6c4a277070160d5743ed833744cb2 245 Gene3D G3DSA:3.40.50.1820 14 228 3.2E-26 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold SHALO_2483 7ca6c4a277070160d5743ed833744cb2 245 SUPERFAMILY SSF53474 15 230 3.88E-25 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold SHALO_2070 122fba3b42ea11f08b5854298cff126d 345 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 2 339 28.046 T 18-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 SHALO_2070 122fba3b42ea11f08b5854298cff126d 345 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 2 141 9.8E-26 T 18-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 SHALO_2070 122fba3b42ea11f08b5854298cff126d 345 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 171 314 1.3E-35 T 18-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 SHALO_2070 122fba3b42ea11f08b5854298cff126d 345 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 333 2.5E-76 T 18-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 SHALO_2070 122fba3b42ea11f08b5854298cff126d 345 SUPERFAMILY SSF53756 2 336 2.86E-83 T 18-10-2018 SHALO_2070 122fba3b42ea11f08b5854298cff126d 345 Gene3D G3DSA:3.40.50.2000 4 154 1.8E-79 T 18-10-2018 SHALO_2070 122fba3b42ea11f08b5854298cff126d 345 Gene3D G3DSA:3.40.50.2000 155 308 1.8E-79 T 18-10-2018 SHALO_1484 3dc75e782d46cb71a43489ee116bbfcf 210 Pfam PF13487 HD domain 88 148 1.4E-20 T 18-10-2018 SHALO_1484 3dc75e782d46cb71a43489ee116bbfcf 210 SUPERFAMILY SSF109604 25 195 2.46E-36 T 18-10-2018 SHALO_1484 3dc75e782d46cb71a43489ee116bbfcf 210 Gene3D G3DSA:1.10.3210.10 13 206 9.6E-66 T 18-10-2018 SHALO_1484 3dc75e782d46cb71a43489ee116bbfcf 210 TIGRFAM TIGR00277 HDIG: HDIG domain 38 125 2.3E-7 T 18-10-2018 IPR006675 HDIG domain SHALO_1484 3dc75e782d46cb71a43489ee116bbfcf 210 SMART SM00471 31 166 8.5E-9 T 18-10-2018 IPR003607 HD/PDEase domain SHALO_0103 90869dbba8eb6c6800cb90b6d1717f86 182 SUPERFAMILY SSF53167 17 177 1.11E-17 T 18-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 SHALO_0103 90869dbba8eb6c6800cb90b6d1717f86 182 Gene3D G3DSA:3.40.50.1580 4 181 2.7E-17 T 18-10-2018 SHALO_1680 7aa065e77ef664b5d00c987c3b1fe664 434 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 316 413 4.8E-18 T 18-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 SHALO_1680 7aa065e77ef664b5d00c987c3b1fe664 434 SUPERFAMILY SSF51735 164 309 2.41E-25 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_1680 7aa065e77ef664b5d00c987c3b1fe664 434 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 157 1.3E-38 T 18-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 SHALO_1680 7aa065e77ef664b5d00c987c3b1fe664 434 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 413 2.7E-119 T 18-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 SHALO_1680 7aa065e77ef664b5d00c987c3b1fe664 434 Gene3D G3DSA:3.40.50.720 163 307 2.1E-35 T 18-10-2018 SHALO_1680 7aa065e77ef664b5d00c987c3b1fe664 434 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 100 123 - T 18-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 SHALO_1680 7aa065e77ef664b5d00c987c3b1fe664 434 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 174 301 5.8E-34 T 18-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase SHALO_1680 7aa065e77ef664b5d00c987c3b1fe664 434 SUPERFAMILY SSF69075 313 414 1.22E-12 T 18-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 SHALO_1680 7aa065e77ef664b5d00c987c3b1fe664 434 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 411 25.428 T 18-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 SHALO_1680 7aa065e77ef664b5d00c987c3b1fe664 434 SUPERFAMILY SSF69742 1 159 9.55E-41 T 18-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 SHALO_1680 7aa065e77ef664b5d00c987c3b1fe664 434 PIRSF PIRSF000445 1 427 9.8E-123 T 18-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 SHALO_1680 7aa065e77ef664b5d00c987c3b1fe664 434 Gene3D G3DSA:3.30.460.30 2 159 4.4E-45 T 18-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 SHALO_2705 10eb24f581ce0a4f07397d1fc6b8a926 378 SMART SM00091 268 336 4.2 T 18-10-2018 IPR000014 PAS domain SHALO_2705 10eb24f581ce0a4f07397d1fc6b8a926 378 SMART SM00091 140 208 5.0E-6 T 18-10-2018 IPR000014 PAS domain SHALO_2705 10eb24f581ce0a4f07397d1fc6b8a926 378 Gene3D G3DSA:3.30.450.20 134 252 1.3E-25 T 18-10-2018 SHALO_2705 10eb24f581ce0a4f07397d1fc6b8a926 378 Pfam PF08447 PAS fold 162 250 5.0E-14 T 18-10-2018 IPR013655 PAS fold-3 GO:0005515 SHALO_2705 10eb24f581ce0a4f07397d1fc6b8a926 378 SUPERFAMILY SSF55785 253 371 3.66E-8 T 18-10-2018 IPR035965 PAS domain superfamily SHALO_2705 10eb24f581ce0a4f07397d1fc6b8a926 378 Gene3D G3DSA:3.30.450.20 254 373 9.4E-6 T 18-10-2018 SHALO_2705 10eb24f581ce0a4f07397d1fc6b8a926 378 Pfam PF08448 PAS fold 274 340 5.9E-6 T 18-10-2018 IPR013656 PAS fold-4 SHALO_2705 10eb24f581ce0a4f07397d1fc6b8a926 378 SUPERFAMILY SSF55785 146 257 1.92E-17 T 18-10-2018 IPR035965 PAS domain superfamily SHALO_2705 10eb24f581ce0a4f07397d1fc6b8a926 378 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 137 260 6.1E-11 T 18-10-2018 IPR000014 PAS domain SHALO_1367 7df1b1ae3ca0ea498623e7b5fddccc7a 66 Pfam PF04316 Anti-sigma-28 factor, FlgM 32 60 1.2E-6 T 18-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal SHALO_1367 7df1b1ae3ca0ea498623e7b5fddccc7a 66 SUPERFAMILY SSF101498 16 63 1.05E-6 T 18-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily SHALO_2463 982115d52cdabc8fc8af29646212cfda 155 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 1 152 24.475 T 18-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 SHALO_2463 982115d52cdabc8fc8af29646212cfda 155 SUPERFAMILY SSF64438 5 153 3.66E-43 T 18-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic SHALO_2463 982115d52cdabc8fc8af29646212cfda 155 Pfam PF03975 CheD chemotactic sensory transduction 57 147 8.8E-25 T 18-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 SHALO_2463 982115d52cdabc8fc8af29646212cfda 155 Gene3D G3DSA:3.30.1330.200 3 155 9.1E-46 T 18-10-2018 IPR038592 CheD-like superfamily SHALO_0175 a3240e15177f01d005d3adf8d0d9110b 294 SUPERFAMILY SSF53807 21 293 2.89E-78 T 18-10-2018 SHALO_0175 a3240e15177f01d005d3adf8d0d9110b 294 Gene3D G3DSA:3.40.50.1980 21 191 7.2E-47 T 18-10-2018 SHALO_0175 a3240e15177f01d005d3adf8d0d9110b 294 Gene3D G3DSA:3.40.50.1980 192 293 6.4E-37 T 18-10-2018 SHALO_0175 a3240e15177f01d005d3adf8d0d9110b 294 Pfam PF01297 Zinc-uptake complex component A periplasmic 22 274 1.4E-60 T 18-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 SHALO_2808 e192e438307e53ceca7d8ee288a2e1de 304 Gene3D G3DSA:3.40.50.720 97 284 2.4E-87 T 18-10-2018 SHALO_2808 e192e438307e53ceca7d8ee288a2e1de 304 SUPERFAMILY SSF51735 104 283 5.01E-51 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_2808 e192e438307e53ceca7d8ee288a2e1de 304 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 222 238 - T 18-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site SHALO_2808 e192e438307e53ceca7d8ee288a2e1de 304 SUPERFAMILY SSF52283 1 135 2.76E-24 T 18-10-2018 SHALO_2808 e192e438307e53ceca7d8ee288a2e1de 304 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 282 2.6E-54 T 18-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 SHALO_2808 e192e438307e53ceca7d8ee288a2e1de 304 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 26 302 2.3E-19 T 18-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 SHALO_2808 e192e438307e53ceca7d8ee288a2e1de 304 Gene3D G3DSA:3.40.50.720 34 297 2.4E-87 T 18-10-2018 SHALO_2808 e192e438307e53ceca7d8ee288a2e1de 304 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 193 215 - T 18-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site SHALO_1410 eb3a26c303e88222e49b9edb285bc72c 282 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 99 258 3.3E-30 T 18-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain SHALO_1410 eb3a26c303e88222e49b9edb285bc72c 282 Gene3D G3DSA:3.40.50.300 79 281 2.4E-63 T 18-10-2018 SHALO_1410 eb3a26c303e88222e49b9edb285bc72c 282 TIGRFAM TIGR00073 hypB: hydrogenase accessory protein HypB 72 279 1.9E-87 T 18-10-2018 IPR004392 Hydrogenase maturation factor HypB GO:0016151|GO:0051604 SHALO_1410 eb3a26c303e88222e49b9edb285bc72c 282 PIRSF PIRSF005624 62 282 7.1E-94 T 18-10-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 SHALO_1410 eb3a26c303e88222e49b9edb285bc72c 282 SUPERFAMILY SSF52540 66 275 1.47E-35 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0331 85aebbcd671843b5ac856e2a791bcdbd 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 4.2E-13 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SHALO_0331 85aebbcd671843b5ac856e2a791bcdbd 296 SUPERFAMILY SSF46785 1 84 9.49E-16 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SHALO_0331 85aebbcd671843b5ac856e2a791bcdbd 296 SUPERFAMILY SSF53850 87 292 9.34E-28 T 18-10-2018 SHALO_0331 85aebbcd671843b5ac856e2a791bcdbd 296 Pfam PF03466 LysR substrate binding domain 87 289 5.0E-30 T 18-10-2018 IPR005119 LysR, substrate-binding SHALO_0331 85aebbcd671843b5ac856e2a791bcdbd 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.3E-6 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SHALO_0331 85aebbcd671843b5ac856e2a791bcdbd 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.3E-6 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SHALO_0331 85aebbcd671843b5ac856e2a791bcdbd 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.3E-6 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SHALO_0331 85aebbcd671843b5ac856e2a791bcdbd 296 Gene3D G3DSA:3.40.190.290 90 294 4.6E-25 T 18-10-2018 SHALO_0331 85aebbcd671843b5ac856e2a791bcdbd 296 Gene3D G3DSA:1.10.10.10 1 89 1.5E-15 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_2298 9e8a0593a766387c5f23b793b5c80c00 591 SUPERFAMILY SSF55073 405 526 1.88E-17 T 18-10-2018 IPR029787 Nucleotide cyclase SHALO_2298 9e8a0593a766387c5f23b793b5c80c00 591 Pfam PF00563 EAL domain 15 236 2.2E-41 T 18-10-2018 IPR001633 EAL domain SHALO_2298 9e8a0593a766387c5f23b793b5c80c00 591 Gene3D G3DSA:3.30.70.270 391 542 7.2E-18 T 18-10-2018 SHALO_2298 9e8a0593a766387c5f23b793b5c80c00 591 SMART SM00267 389 535 1.9E-4 T 18-10-2018 IPR000160 GGDEF domain SHALO_2298 9e8a0593a766387c5f23b793b5c80c00 591 Pfam PF00990 Diguanylate cyclase, GGDEF domain 404 527 3.8E-12 T 18-10-2018 IPR000160 GGDEF domain SHALO_2298 9e8a0593a766387c5f23b793b5c80c00 591 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 403 482 3.6E-11 T 18-10-2018 IPR000160 GGDEF domain SHALO_2298 9e8a0593a766387c5f23b793b5c80c00 591 SMART SM00052 7 241 4.3E-11 T 18-10-2018 IPR001633 EAL domain SHALO_2298 9e8a0593a766387c5f23b793b5c80c00 591 SUPERFAMILY SSF141868 15 237 4.71E-52 T 18-10-2018 IPR035919 EAL domain superfamily SHALO_2298 9e8a0593a766387c5f23b793b5c80c00 591 SUPERFAMILY SSF54631 275 392 1.18E-5 T 18-10-2018 SHALO_2298 9e8a0593a766387c5f23b793b5c80c00 591 Gene3D G3DSA:3.20.20.450 3 250 8.7E-52 T 18-10-2018 IPR035919 EAL domain superfamily SHALO_1157 cc00c6396bb5b61451b61056b5027796 724 Gene3D G3DSA:3.30.565.10 570 720 1.3E-31 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_1157 cc00c6396bb5b61451b61056b5027796 724 SUPERFAMILY SSF55874 568 717 3.14E-30 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_1157 cc00c6396bb5b61451b61056b5027796 724 Pfam PF02743 Cache domain 48 359 2.4E-12 T 18-10-2018 IPR033479 Double Cache domain 1 SHALO_1157 cc00c6396bb5b61451b61056b5027796 724 Gene3D G3DSA:1.10.287.130 474 569 2.7E-11 T 18-10-2018 SHALO_1157 cc00c6396bb5b61451b61056b5027796 724 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 611 718 2.3E-17 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_1157 cc00c6396bb5b61451b61056b5027796 724 SUPERFAMILY SSF47384 484 569 6.87E-6 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SHALO_1157 cc00c6396bb5b61451b61056b5027796 724 PRINTS PR00344 Bacterial sensor protein C-terminal signature 681 699 1.4E-7 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_1157 cc00c6396bb5b61451b61056b5027796 724 PRINTS PR00344 Bacterial sensor protein C-terminal signature 650 664 1.4E-7 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_1157 cc00c6396bb5b61451b61056b5027796 724 PRINTS PR00344 Bacterial sensor protein C-terminal signature 668 678 1.4E-7 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_1157 cc00c6396bb5b61451b61056b5027796 724 SMART SM00387 609 721 1.6E-23 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_1796 d9e40752641abba7d9286dd7f64893e0 424 Gene3D G3DSA:3.30.2010.10 209 291 3.8E-27 T 18-10-2018 SHALO_1796 d9e40752641abba7d9286dd7f64893e0 424 Pfam PF16491 CAAX prenyl protease N-terminal, five membrane helices 55 210 5.8E-33 T 18-10-2018 IPR032456 CAAX prenyl protease 1, N-terminal KEGG: 00900+3.4.24.84 SHALO_1796 d9e40752641abba7d9286dd7f64893e0 424 Pfam PF01435 Peptidase family M48 213 412 5.9E-41 T 18-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 SHALO_1903 1798b007a4f55762a27afe678635be5d 357 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 5 354 50.674 T 18-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 SHALO_1903 1798b007a4f55762a27afe678635be5d 357 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 241 260 - T 18-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 SHALO_1903 1798b007a4f55762a27afe678635be5d 357 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 6 348 2.4E-134 T 18-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 SHALO_1903 1798b007a4f55762a27afe678635be5d 357 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 6 342 2.1E-155 T 18-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 SHALO_1903 1798b007a4f55762a27afe678635be5d 357 Gene3D G3DSA:3.40.718.10 3 356 3.9E-142 T 18-10-2018 SHALO_1903 1798b007a4f55762a27afe678635be5d 357 SMART SM01329 6 350 9.1E-198 T 18-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 SHALO_1903 1798b007a4f55762a27afe678635be5d 357 SUPERFAMILY SSF53659 5 352 1.06E-123 T 18-10-2018 SHALO_0656 628954119c95b1decc1127e935ac60fb 375 SUPERFAMILY SSF53383 28 372 4.73E-69 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase SHALO_0656 628954119c95b1decc1127e935ac60fb 375 Gene3D G3DSA:3.90.1150.10 8 362 5.6E-117 T 18-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 SHALO_0656 628954119c95b1decc1127e935ac60fb 375 Pfam PF00155 Aminotransferase class I and II 27 366 1.6E-32 T 18-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SHALO_0656 628954119c95b1decc1127e935ac60fb 375 Gene3D G3DSA:3.40.640.10 38 278 5.6E-117 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 SHALO_1860 1d4395b6f56a3ec8cd584d1f10b139b8 147 Gene3D G3DSA:1.20.120.1490 48 146 1.4E-7 T 18-10-2018 SHALO_1123 291728f5eb77f2bb2672356724077d15 648 SMART SM00955 216 537 9.3E-127 T 18-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 SHALO_1123 291728f5eb77f2bb2672356724077d15 648 Pfam PF00773 RNB domain 216 533 3.1E-86 T 18-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 SHALO_1123 291728f5eb77f2bb2672356724077d15 648 SUPERFAMILY SSF50249 179 580 4.91E-107 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold SHALO_1123 291728f5eb77f2bb2672356724077d15 648 ProSitePatterns PS01175 Ribonuclease II family signature. 504 528 - T 18-10-2018 IPR022966 Ribonuclease II/R, conserved site SHALO_2221 a85c514bcade2da4fcd0b0314b041072 306 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 212 6.2E-25 T 18-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 SHALO_2221 a85c514bcade2da4fcd0b0314b041072 306 SUPERFAMILY SSF51735 1 283 3.05E-36 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_2221 a85c514bcade2da4fcd0b0314b041072 306 Gene3D G3DSA:3.40.50.720 1 284 1.1E-34 T 18-10-2018 SHALO_0940 512f727008583a33df3541fa7bbf2998 282 Pfam PF01040 UbiA prenyltransferase family 34 243 3.5E-39 T 18-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 SHALO_0940 512f727008583a33df3541fa7bbf2998 282 Gene3D G3DSA:1.10.357.140 5 176 9.8E-14 T 18-10-2018 SHALO_0940 512f727008583a33df3541fa7bbf2998 282 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 1 282 13.546 T 18-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 SHALO_1700 a8519893cbd5c6517664836f08135fe7 299 SUPERFAMILY SSF53335 89 285 2.81E-25 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_1700 a8519893cbd5c6517664836f08135fe7 299 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 15 297 4.3E-95 T 18-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 SHALO_1700 a8519893cbd5c6517664836f08135fe7 299 Pfam PF08003 Protein of unknown function (DUF1698) 15 298 1.1E-87 T 18-10-2018 IPR027555 tRNA (mo5U34)-methyltransferase-like SHALO_1700 a8519893cbd5c6517664836f08135fe7 299 Hamap MF_01590 tRNA U34 carboxymethyltransferase [cmoB]. 1 299 47.755 T 18-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 SHALO_1700 a8519893cbd5c6517664836f08135fe7 299 Gene3D G3DSA:3.40.50.150 47 275 6.3E-21 T 18-10-2018 SHALO_1055 5382d587759e404278e4d3e2208a3e02 457 PIRSF PIRSF005522 4 457 3.6E-159 T 18-10-2018 IPR016450 Uncharacterised conserved protein UCP005522 SHALO_1055 5382d587759e404278e4d3e2208a3e02 457 Gene3D G3DSA:3.40.50.11290 195 290 4.3E-31 T 18-10-2018 SHALO_1055 5382d587759e404278e4d3e2208a3e02 457 Gene3D G3DSA:3.30.1490.270 331 386 1.9E-17 T 18-10-2018 SHALO_1055 5382d587759e404278e4d3e2208a3e02 457 SUPERFAMILY SSF56059 11 446 1.06E-40 T 18-10-2018 SHALO_1055 5382d587759e404278e4d3e2208a3e02 457 Pfam PF14403 Circularly permuted ATP-grasp type 2 57 431 1.3E-133 T 18-10-2018 IPR025841 Circularly permuted ATP-grasp type 2 SHALO_2886 24ca3060cac6c31fe732a31c124d8af3 852 Gene3D G3DSA:2.20.25.90 37 100 6.0E-19 T 18-10-2018 SHALO_2886 24ca3060cac6c31fe732a31c124d8af3 852 SMART SM00926 43 96 2.5E-11 T 18-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_2886 24ca3060cac6c31fe732a31c124d8af3 852 Pfam PF00384 Molybdopterin oxidoreductase 99 558 4.8E-31 T 18-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_2886 24ca3060cac6c31fe732a31c124d8af3 852 SUPERFAMILY SSF50692 710 851 6.84E-22 T 18-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily SHALO_2886 24ca3060cac6c31fe732a31c124d8af3 852 Pfam PF01568 Molydopterin dinucleotide binding domain 736 840 9.6E-12 T 18-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 SHALO_2886 24ca3060cac6c31fe732a31c124d8af3 852 SUPERFAMILY SSF53706 44 717 7.85E-125 T 18-10-2018 SHALO_2886 24ca3060cac6c31fe732a31c124d8af3 852 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 44 95 6.1E-9 T 18-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_2886 24ca3060cac6c31fe732a31c124d8af3 852 Gene3D G3DSA:2.40.40.20 709 852 4.5E-22 T 18-10-2018 SHALO_2886 24ca3060cac6c31fe732a31c124d8af3 852 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 31 0.0012 T 18-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal SHALO_2239 23a6a7c0061c0c5c0877ab63336cd5a1 107 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 1 104 8.6E-19 T 18-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 SHALO_1681 36d11dc9b980a58d01d5d47e85969db7 298 Pfam PF00348 Polyprenyl synthetase 28 247 9.7E-59 T 18-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 SHALO_1681 36d11dc9b980a58d01d5d47e85969db7 298 Gene3D G3DSA:1.10.600.10 2 298 5.0E-90 T 18-10-2018 IPR008949 Isoprenoid synthase domain superfamily SHALO_1681 36d11dc9b980a58d01d5d47e85969db7 298 SUPERFAMILY SSF48576 25 283 2.88E-68 T 18-10-2018 IPR008949 Isoprenoid synthase domain superfamily SHALO_1681 36d11dc9b980a58d01d5d47e85969db7 298 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 64 78 - T 18-10-2018 IPR033749 Polyprenyl synthetase, conserved site SHALO_1681 36d11dc9b980a58d01d5d47e85969db7 298 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 182 194 - T 18-10-2018 IPR033749 Polyprenyl synthetase, conserved site SHALO_2510 ebf9ed91d6f24fa880db93b11052dc52 164 Gene3D G3DSA:1.10.10.10 15 104 1.9E-15 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_2510 ebf9ed91d6f24fa880db93b11052dc52 164 Gene3D G3DSA:3.30.1490.190 107 161 2.8E-19 T 18-10-2018 SHALO_2510 ebf9ed91d6f24fa880db93b11052dc52 164 Pfam PF01475 Ferric uptake regulator family 30 151 2.4E-28 T 18-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 SHALO_2510 ebf9ed91d6f24fa880db93b11052dc52 164 SUPERFAMILY SSF46785 24 155 3.5E-27 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SHALO_0095 80e68959609878e5b60cbb03277df779 229 Pfam PF04055 Radical SAM superfamily 32 168 2.8E-18 T 18-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 SHALO_0095 80e68959609878e5b60cbb03277df779 229 TIGRFAM TIGR02495 NrdG2: anaerobic ribonucleoside-triphosphate reductase activating protein 10 197 6.5E-57 T 18-10-2018 IPR012840 Anaerobic ribonucleoside-triphosphate reductase activating protein SHALO_0095 80e68959609878e5b60cbb03277df779 229 Gene3D G3DSA:3.20.20.70 7 215 4.6E-31 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_0095 80e68959609878e5b60cbb03277df779 229 Pfam PF13353 4Fe-4S single cluster domain 28 123 6.5E-8 T 18-10-2018 SHALO_0095 80e68959609878e5b60cbb03277df779 229 SUPERFAMILY SSF102114 28 195 3.92E-24 T 18-10-2018 SHALO_1062 7b85a8952cf02158cae073b3f563922e 125 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 36 51 1.3E-19 T 18-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SHALO_1062 7b85a8952cf02158cae073b3f563922e 125 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 83 98 1.3E-19 T 18-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SHALO_1062 7b85a8952cf02158cae073b3f563922e 125 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 68 83 1.3E-19 T 18-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SHALO_1062 7b85a8952cf02158cae073b3f563922e 125 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 66 1.3E-19 T 18-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SHALO_1062 7b85a8952cf02158cae073b3f563922e 125 SMART SM00418 34 112 2.5E-30 T 18-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SHALO_1062 7b85a8952cf02158cae073b3f563922e 125 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 57 75 - T 18-10-2018 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 SHALO_1062 7b85a8952cf02158cae073b3f563922e 125 Pfam PF01022 Bacterial regulatory protein, arsR family 41 86 1.1E-19 T 18-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SHALO_1062 7b85a8952cf02158cae073b3f563922e 125 SUPERFAMILY SSF46785 17 113 8.79E-29 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SHALO_1062 7b85a8952cf02158cae073b3f563922e 125 Gene3D G3DSA:1.10.10.10 1 118 9.7E-40 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_1670 d742ad5894ed2204c5286688c5982cc1 1008 SUPERFAMILY SSF82866 773 995 1.03E-51 T 18-10-2018 SHALO_1670 d742ad5894ed2204c5286688c5982cc1 1008 PRINTS PR00702 Acriflavin resistance protein family signature 593 607 2.9E-64 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SHALO_1670 d742ad5894ed2204c5286688c5982cc1 1008 PRINTS PR00702 Acriflavin resistance protein family signature 347 368 2.9E-64 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SHALO_1670 d742ad5894ed2204c5286688c5982cc1 1008 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 2.9E-64 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SHALO_1670 d742ad5894ed2204c5286688c5982cc1 1008 PRINTS PR00702 Acriflavin resistance protein family signature 428 451 2.9E-64 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SHALO_1670 d742ad5894ed2204c5286688c5982cc1 1008 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 2.9E-64 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SHALO_1670 d742ad5894ed2204c5286688c5982cc1 1008 PRINTS PR00702 Acriflavin resistance protein family signature 375 399 2.9E-64 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SHALO_1670 d742ad5894ed2204c5286688c5982cc1 1008 PRINTS PR00702 Acriflavin resistance protein family signature 453 476 2.9E-64 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SHALO_1670 d742ad5894ed2204c5286688c5982cc1 1008 PRINTS PR00702 Acriflavin resistance protein family signature 527 544 2.9E-64 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SHALO_1670 d742ad5894ed2204c5286688c5982cc1 1008 PRINTS PR00702 Acriflavin resistance protein family signature 320 343 2.9E-64 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SHALO_1670 d742ad5894ed2204c5286688c5982cc1 1008 Gene3D G3DSA:3.30.70.1430 38 784 1.9E-296 T 18-10-2018 SHALO_1670 d742ad5894ed2204c5286688c5982cc1 1008 Gene3D G3DSA:1.20.1640.10 8 489 1.9E-296 T 18-10-2018 SHALO_1670 d742ad5894ed2204c5286688c5982cc1 1008 Gene3D G3DSA:3.30.70.1430 542 636 1.9E-296 T 18-10-2018 SHALO_1670 d742ad5894ed2204c5286688c5982cc1 1008 SUPERFAMILY SSF82714 177 255 4.58E-10 T 18-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SHALO_1670 d742ad5894ed2204c5286688c5982cc1 1008 SUPERFAMILY SSF82866 280 479 1.27E-39 T 18-10-2018 SHALO_1670 d742ad5894ed2204c5286688c5982cc1 1008 Gene3D G3DSA:3.30.2090.10 173 259 1.9E-296 T 18-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SHALO_1670 d742ad5894ed2204c5286688c5982cc1 1008 SUPERFAMILY SSF82714 688 774 5.36E-12 T 18-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SHALO_1670 d742ad5894ed2204c5286688c5982cc1 1008 SUPERFAMILY SSF82693 540 632 5.75E-10 T 18-10-2018 SHALO_1670 d742ad5894ed2204c5286688c5982cc1 1008 Gene3D G3DSA:3.30.70.1440 637 832 1.9E-296 T 18-10-2018 SHALO_1670 d742ad5894ed2204c5286688c5982cc1 1008 SUPERFAMILY SSF82693 38 128 4.36E-25 T 18-10-2018 SHALO_1670 d742ad5894ed2204c5286688c5982cc1 1008 Gene3D G3DSA:3.30.70.1320 130 316 1.9E-296 T 18-10-2018 SHALO_1670 d742ad5894ed2204c5286688c5982cc1 1008 Gene3D G3DSA:1.20.1640.10 490 989 1.9E-296 T 18-10-2018 SHALO_1670 d742ad5894ed2204c5286688c5982cc1 1008 SUPERFAMILY SSF82693 133 314 3.49E-16 T 18-10-2018 SHALO_1670 d742ad5894ed2204c5286688c5982cc1 1008 Pfam PF00873 AcrB/AcrD/AcrF family 1 991 1.5E-272 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SHALO_1670 d742ad5894ed2204c5286688c5982cc1 1008 Gene3D G3DSA:3.30.2090.10 687 776 1.9E-296 T 18-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SHALO_2776 7249a2dc75aa5fb99f4c2292f54e35dd 191 Gene3D G3DSA:1.10.286.10 2 54 1.6E-19 T 18-10-2018 SHALO_2776 7249a2dc75aa5fb99f4c2292f54e35dd 191 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 8 183 6.8E-74 T 18-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 SHALO_2776 7249a2dc75aa5fb99f4c2292f54e35dd 191 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 3 184 39.683 T 18-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 SHALO_2776 7249a2dc75aa5fb99f4c2292f54e35dd 191 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 64 80 - T 18-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 SHALO_2776 7249a2dc75aa5fb99f4c2292f54e35dd 191 SUPERFAMILY SSF55620 4 184 5.19E-76 T 18-10-2018 SHALO_2776 7249a2dc75aa5fb99f4c2292f54e35dd 191 Pfam PF01227 GTP cyclohydrolase I 8 183 9.7E-77 T 18-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 SHALO_2776 7249a2dc75aa5fb99f4c2292f54e35dd 191 Gene3D G3DSA:3.30.1130.10 55 187 3.6E-59 T 18-10-2018 SHALO_0610 b26309c525d48946d704a74d70b7109d 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 57 4.1E-16 T 18-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SHALO_0610 b26309c525d48946d704a74d70b7109d 200 SUPERFAMILY SSF46689 2 79 1.7E-19 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SHALO_0610 b26309c525d48946d704a74d70b7109d 200 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 146 198 5.9E-11 T 18-10-2018 IPR039536 Transcriptional regulator TetR, C-terminal, Proteobacteria type SHALO_0610 b26309c525d48946d704a74d70b7109d 200 Gene3D G3DSA:1.10.357.10 62 199 1.7E-25 T 18-10-2018 SHALO_0610 b26309c525d48946d704a74d70b7109d 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 2.5E-8 T 18-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SHALO_0610 b26309c525d48946d704a74d70b7109d 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 2.5E-8 T 18-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SHALO_0610 b26309c525d48946d704a74d70b7109d 200 Gene3D G3DSA:1.10.10.60 1 58 7.2E-21 T 18-10-2018 SHALO_1791 c773b92e627a7840bdd1ca7c3d9db93d 482 Pfam PF13624 SurA N-terminal domain 1 160 1.7E-41 T 18-10-2018 SHALO_1791 c773b92e627a7840bdd1ca7c3d9db93d 482 Pfam PF13145 PPIC-type PPIASE domain 237 352 1.6E-10 T 18-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 SHALO_1791 c773b92e627a7840bdd1ca7c3d9db93d 482 Gene3D G3DSA:1.10.4030.30 40 177 5.2E-8 T 18-10-2018 SHALO_1791 c773b92e627a7840bdd1ca7c3d9db93d 482 SUPERFAMILY SSF109998 40 227 2.35E-20 T 18-10-2018 IPR027304 Trigger factor/SurA domain superfamily SHALO_2408 29a57cfcc1f5119f67166ffe3cd3249e 93 Gene3D G3DSA:3.30.300.130 1 86 1.8E-22 T 18-10-2018 IPR034904 Fe-S cluster assembly domain superfamily SHALO_2408 29a57cfcc1f5119f67166ffe3cd3249e 93 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 18 80 5.0E-15 T 18-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 SHALO_2408 29a57cfcc1f5119f67166ffe3cd3249e 93 Pfam PF01106 NifU-like domain 13 78 9.3E-22 T 18-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 SHALO_2408 29a57cfcc1f5119f67166ffe3cd3249e 93 SUPERFAMILY SSF117916 3 86 1.42E-23 T 18-10-2018 IPR034904 Fe-S cluster assembly domain superfamily SHALO_2364 a86461a3ffa006fd1983e74c79a25002 418 Gene3D G3DSA:1.10.3720.10 182 413 5.8E-34 T 18-10-2018 IPR035906 MetI-like superfamily SHALO_2364 a86461a3ffa006fd1983e74c79a25002 418 SUPERFAMILY SSF161098 175 401 1.83E-29 T 18-10-2018 IPR035906 MetI-like superfamily SHALO_2364 a86461a3ffa006fd1983e74c79a25002 418 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 112 409 1.4E-85 T 18-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 SHALO_2364 a86461a3ffa006fd1983e74c79a25002 418 Pfam PF12501 Phosphate ATP-binding cassette transporter 17 60 1.1E-7 T 18-10-2018 IPR022182 ABC transporter phosphate permease PstC, N-terminal domain GO:0006817 SHALO_2364 a86461a3ffa006fd1983e74c79a25002 418 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 201 403 2.2E-17 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 SHALO_1594 1b94fcedfdcf02e58c06deac3466ca82 312 Hamap MF_02086 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 1 300 46.209 T 18-10-2018 IPR037539 4-hydroxythreonine-4-phosphate dehydrogenase, epsilonproteobacteria KEGG: 00750+1.1.1.262 SHALO_1594 1b94fcedfdcf02e58c06deac3466ca82 312 Gene3D G3DSA:3.40.718.10 1 306 3.4E-100 T 18-10-2018 SHALO_1594 1b94fcedfdcf02e58c06deac3466ca82 312 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 29 299 8.7E-84 T 18-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 SHALO_1594 1b94fcedfdcf02e58c06deac3466ca82 312 SUPERFAMILY SSF53659 2 304 8.79E-79 T 18-10-2018 SHALO_1507 fa555cb5b57cd8ef3914cf3925c58a3a 303 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 4 284 1.5E-64 T 18-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 SHALO_1507 fa555cb5b57cd8ef3914cf3925c58a3a 303 Pfam PF03186 CobD/Cbib protein 8 280 2.4E-84 T 18-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 SHALO_1507 fa555cb5b57cd8ef3914cf3925c58a3a 303 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 303 70.52 T 18-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 SHALO_2333 f678112a0e4daf4a514fe3298ce6aee8 231 Gene3D G3DSA:3.40.250.10 95 226 1.5E-15 T 18-10-2018 IPR036873 Rhodanese-like domain superfamily SHALO_2333 f678112a0e4daf4a514fe3298ce6aee8 231 SUPERFAMILY SSF52821 78 224 6.02E-17 T 18-10-2018 IPR036873 Rhodanese-like domain superfamily SHALO_2333 f678112a0e4daf4a514fe3298ce6aee8 231 Pfam PF00581 Rhodanese-like domain 115 220 1.2E-9 T 18-10-2018 IPR001763 Rhodanese-like domain SHALO_2333 f678112a0e4daf4a514fe3298ce6aee8 231 SMART SM00450 102 225 4.8E-4 T 18-10-2018 IPR001763 Rhodanese-like domain SHALO_1516 20cc3394cb1e54eb7fb116442f69a93d 343 Gene3D G3DSA:1.10.3470.10 12 342 1.4E-97 T 18-10-2018 IPR037294 ABC transporter, BtuC-like SHALO_1516 20cc3394cb1e54eb7fb116442f69a93d 343 Pfam PF01032 FecCD transport family 29 335 5.1E-89 T 18-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 SHALO_1516 20cc3394cb1e54eb7fb116442f69a93d 343 SUPERFAMILY SSF81345 11 334 2.48E-75 T 18-10-2018 IPR037294 ABC transporter, BtuC-like SHALO_0226 dde1bf2a1e521f8296ba29d1e8a84c23 472 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 246 253 - T 18-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 SHALO_0226 dde1bf2a1e521f8296ba29d1e8a84c23 472 Pfam PF00171 Aldehyde dehydrogenase family 18 469 3.1E-139 T 18-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 SHALO_0226 dde1bf2a1e521f8296ba29d1e8a84c23 472 SUPERFAMILY SSF53720 3 471 3.8E-133 T 18-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 SHALO_0226 dde1bf2a1e521f8296ba29d1e8a84c23 472 Gene3D G3DSA:3.40.605.10 25 455 5.1E-138 T 18-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 SHALO_0226 dde1bf2a1e521f8296ba29d1e8a84c23 472 Gene3D G3DSA:3.40.309.10 250 438 5.1E-138 T 18-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 SHALO_0528 466dfc69bf3d08b09521a4db10104d15 162 Hamap MF_02110 UPF0763 protein . 10 154 25.93 T 18-10-2018 IPR019724 Uncharacterised protein family UPF0763 SHALO_0528 466dfc69bf3d08b09521a4db10104d15 162 Pfam PF10788 Protein of unknown function (DUF2603) 13 146 9.6E-46 T 18-10-2018 IPR019724 Uncharacterised protein family UPF0763 SHALO_0548 04144cee33deb498ebe4c7f94e5eed96 374 Gene3D G3DSA:3.20.20.140 63 370 1.0E-13 T 18-10-2018 SHALO_0548 04144cee33deb498ebe4c7f94e5eed96 374 SUPERFAMILY SSF51556 85 299 4.49E-8 T 18-10-2018 IPR032466 Metal-dependent hydrolase SHALO_0623 12565b5892526c335fa56883e4b18012 443 Pfam PF03573 outer membrane porin, OprD family 111 176 1.2E-8 T 18-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 SHALO_0623 12565b5892526c335fa56883e4b18012 443 Gene3D G3DSA:2.40.160.10 33 443 9.2E-27 T 18-10-2018 IPR023614 Porin domain superfamily SHALO_0623 12565b5892526c335fa56883e4b18012 443 SUPERFAMILY SSF56935 34 443 5.95E-5 T 18-10-2018 SHALO_0353 8113f61108ab27abb6f7f897a9cf17b9 195 Gene3D G3DSA:1.10.760.10 113 180 5.9E-10 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_0353 8113f61108ab27abb6f7f897a9cf17b9 195 SUPERFAMILY SSF46626 112 181 4.14E-11 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_1854 98a0b63e854b1cb80cee8054424961f2 787 Gene3D G3DSA:3.50.50.60 108 273 2.8E-27 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SHALO_1854 98a0b63e854b1cb80cee8054424961f2 787 Gene3D G3DSA:3.30.70.20 297 415 2.3E-5 T 18-10-2018 SHALO_1854 98a0b63e854b1cb80cee8054424961f2 787 Pfam PF13534 4Fe-4S dicluster domain 302 364 1.6E-7 T 18-10-2018 SHALO_1854 98a0b63e854b1cb80cee8054424961f2 787 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 351 362 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_1854 98a0b63e854b1cb80cee8054424961f2 787 Gene3D G3DSA:1.10.1060.10 2 107 1.3E-20 T 18-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 SHALO_1854 98a0b63e854b1cb80cee8054424961f2 787 SUPERFAMILY SSF46548 291 385 6.28E-11 T 18-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 SHALO_1854 98a0b63e854b1cb80cee8054424961f2 787 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 10 93 3.4E-16 T 18-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 SHALO_1854 98a0b63e854b1cb80cee8054424961f2 787 Pfam PF13450 NAD(P)-binding Rossmann-like domain 113 151 1.6E-9 T 18-10-2018 SHALO_1854 98a0b63e854b1cb80cee8054424961f2 787 Pfam PF02754 Cysteine-rich domain 443 529 0.0073 T 18-10-2018 IPR004017 Cysteine-rich domain SHALO_1854 98a0b63e854b1cb80cee8054424961f2 787 Pfam PF02754 Cysteine-rich domain 564 643 1.3E-5 T 18-10-2018 IPR004017 Cysteine-rich domain SHALO_1854 98a0b63e854b1cb80cee8054424961f2 787 SUPERFAMILY SSF51971 64 224 5.83E-19 T 18-10-2018 SHALO_1166 f24934d73588a4340eb5de7b00d972e6 137 Pfam PF01850 PIN domain 5 116 2.4E-9 T 18-10-2018 IPR002716 PIN domain SHALO_1166 f24934d73588a4340eb5de7b00d972e6 137 SUPERFAMILY SSF88723 1 127 3.92E-16 T 18-10-2018 IPR029060 PIN-like domain superfamily SHALO_1166 f24934d73588a4340eb5de7b00d972e6 137 Gene3D G3DSA:3.40.50.1010 1 127 2.1E-8 T 18-10-2018 SHALO_0749 37c8d0dd3ee36c35c5d2c0a16eed1864 315 Gene3D G3DSA:3.30.70.270 147 314 8.0E-49 T 18-10-2018 SHALO_0749 37c8d0dd3ee36c35c5d2c0a16eed1864 315 SUPERFAMILY SSF55073 159 312 2.43E-43 T 18-10-2018 IPR029787 Nucleotide cyclase SHALO_0749 37c8d0dd3ee36c35c5d2c0a16eed1864 315 Pfam PF00990 Diguanylate cyclase, GGDEF domain 155 309 4.0E-39 T 18-10-2018 IPR000160 GGDEF domain SHALO_0749 37c8d0dd3ee36c35c5d2c0a16eed1864 315 SMART SM00267 143 314 4.0E-47 T 18-10-2018 IPR000160 GGDEF domain SHALO_0749 37c8d0dd3ee36c35c5d2c0a16eed1864 315 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 150 311 1.7E-41 T 18-10-2018 IPR000160 GGDEF domain SHALO_2517 47beb56fe398781c4d7de428fba74cbd 632 Pfam PF00672 HAMP domain 367 409 1.4E-6 T 18-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 SHALO_2517 47beb56fe398781c4d7de428fba74cbd 632 SUPERFAMILY SSF55874 511 628 2.88E-12 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_2517 47beb56fe398781c4d7de428fba74cbd 632 SMART SM00304 361 413 1.1E-6 T 18-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 SHALO_2517 47beb56fe398781c4d7de428fba74cbd 632 Pfam PF07568 Histidine kinase 439 514 1.4E-21 T 18-10-2018 IPR011495 Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain SHALO_2517 47beb56fe398781c4d7de428fba74cbd 632 Gene3D G3DSA:3.30.565.10 496 632 2.6E-25 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_2517 47beb56fe398781c4d7de428fba74cbd 632 SUPERFAMILY SSF158472 365 412 5.89E-7 T 18-10-2018 SHALO_2517 47beb56fe398781c4d7de428fba74cbd 632 Gene3D G3DSA:3.30.450.20 416 491 4.8E-8 T 18-10-2018 SHALO_2517 47beb56fe398781c4d7de428fba74cbd 632 Pfam PF08269 Cache domain 168 331 1.1E-9 T 18-10-2018 IPR004010 Double Cache domain 2 SHALO_2517 47beb56fe398781c4d7de428fba74cbd 632 Gene3D G3DSA:1.20.1480.50 323 415 2.5E-8 T 18-10-2018 SHALO_1654 bbd449bc0913b5119f1f1a233adccacd 431 Pfam PF06114 IrrE N-terminal-like domain 294 422 7.8E-14 T 18-10-2018 IPR010359 IrrE N-terminal-like domain SHALO_1654 bbd449bc0913b5119f1f1a233adccacd 431 SUPERFAMILY SSF52980 35 136 1.66E-6 T 18-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 SHALO_1654 bbd449bc0913b5119f1f1a233adccacd 431 Gene3D G3DSA:3.40.1350.10 28 146 4.0E-5 T 18-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 SHALO_1654 bbd449bc0913b5119f1f1a233adccacd 431 Pfam PF04471 Restriction endonuclease 36 131 1.8E-7 T 18-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 SHALO_0195 600d39586509ae7dd5795d3eb4a56ef0 495 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 16 480 1.4E-115 T 18-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 SHALO_0195 600d39586509ae7dd5795d3eb4a56ef0 495 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 12 483 15.544 T 18-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 SHALO_0195 600d39586509ae7dd5795d3eb4a56ef0 495 Pfam PF00361 Proton-conducting membrane transporter 129 427 4.5E-58 T 18-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0842 1cc5e46bdd98a22bb9b53e697066836e 368 Pfam PF01098 Cell cycle protein 16 354 1.0E-85 T 18-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 SHALO_2586 e7f5827ff36adbdd0dafb24d9d82aa49 439 Gene3D G3DSA:1.20.1270.370 54 264 4.7E-29 T 18-10-2018 SHALO_2586 e7f5827ff36adbdd0dafb24d9d82aa49 439 Gene3D G3DSA:3.40.50.11890 71 196 4.7E-29 T 18-10-2018 SHALO_2586 e7f5827ff36adbdd0dafb24d9d82aa49 439 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 78 426 2.6E-82 T 18-10-2018 IPR010327 FldB/FldC dehydratase alpha/beta subunit SHALO_2586 e7f5827ff36adbdd0dafb24d9d82aa49 439 Gene3D G3DSA:3.40.50.11900 280 436 7.0E-42 T 18-10-2018 SHALO_0313 c194ca2053426a5ca4dacff5452a03a8 322 Gene3D G3DSA:1.20.1630.10 8 245 6.8E-17 T 18-10-2018 SHALO_0313 c194ca2053426a5ca4dacff5452a03a8 322 Pfam PF03916 Polysulphide reductase, NrfD 9 320 6.4E-69 T 18-10-2018 IPR005614 NrfD family SHALO_1987 a74ff0a202eb32496377cd9e98dc9e1d 195 Gene3D G3DSA:3.20.20.70 1 195 8.2E-58 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_1987 a74ff0a202eb32496377cd9e98dc9e1d 195 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 3 191 3.8E-38 T 18-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 SHALO_1987 a74ff0a202eb32496377cd9e98dc9e1d 195 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 1 195 34.601 T 18-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 SHALO_1987 a74ff0a202eb32496377cd9e98dc9e1d 195 SUPERFAMILY SSF51366 1 193 3.45E-51 T 18-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 SHALO_3010 993af44b533f8c845c16abe967fad1c8 363 Gene3D G3DSA:1.20.1250.20 186 363 3.1E-23 T 18-10-2018 SHALO_3010 993af44b533f8c845c16abe967fad1c8 363 PIRSF PIRSF004925 1 363 8.4E-67 T 18-10-2018 IPR026032 Probable 3-phenylpropionic acid transporter SHALO_3010 993af44b533f8c845c16abe967fad1c8 363 SUPERFAMILY SSF103473 3 361 9.42E-28 T 18-10-2018 IPR036259 MFS transporter superfamily SHALO_3010 993af44b533f8c845c16abe967fad1c8 363 Pfam PF12832 MFS_1 like family 5 340 7.6E-35 T 18-10-2018 IPR024989 Major facilitator superfamily associated domain SHALO_3010 993af44b533f8c845c16abe967fad1c8 363 Gene3D G3DSA:1.20.1250.20 2 176 3.2E-12 T 18-10-2018 SHALO_2731 a8f2a09319ebc2cdd99dc679191e5686 91 Gene3D G3DSA:3.30.70.100 15 89 3.6E-14 T 18-10-2018 SHALO_2731 a8f2a09319ebc2cdd99dc679191e5686 91 SUPERFAMILY SSF55008 18 85 1.57E-15 T 18-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 SHALO_2731 a8f2a09319ebc2cdd99dc679191e5686 91 PRINTS PR00946 Mercury scavenger protein signature 26 42 5.0E-7 T 18-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 SHALO_2731 a8f2a09319ebc2cdd99dc679191e5686 91 PRINTS PR00946 Mercury scavenger protein signature 42 57 5.0E-7 T 18-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 SHALO_2731 a8f2a09319ebc2cdd99dc679191e5686 91 PRINTS PR00946 Mercury scavenger protein signature 15 26 5.0E-7 T 18-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 SHALO_2731 a8f2a09319ebc2cdd99dc679191e5686 91 PRINTS PR00946 Mercury scavenger protein signature 70 84 5.0E-7 T 18-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 SHALO_2731 a8f2a09319ebc2cdd99dc679191e5686 91 Pfam PF00403 Heavy-metal-associated domain 20 80 7.2E-12 T 18-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SHALO_2457 a25e111a0a2ce7d091f19ae5e6f7421e 126 SUPERFAMILY SSF52172 7 125 1.15E-30 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_2457 a25e111a0a2ce7d091f19ae5e6f7421e 126 Gene3D G3DSA:3.40.50.2300 4 125 1.3E-29 T 18-10-2018 SHALO_2457 a25e111a0a2ce7d091f19ae5e6f7421e 126 SMART SM00448 7 121 2.9E-24 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_2457 a25e111a0a2ce7d091f19ae5e6f7421e 126 Pfam PF00072 Response regulator receiver domain 10 120 2.2E-24 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_2234 5e373bc87a437332bbe90f55d40007f6 340 Gene3D G3DSA:3.40.50.720 6 327 1.7E-125 T 18-10-2018 SHALO_2234 5e373bc87a437332bbe90f55d40007f6 340 Pfam PF16363 GDP-mannose 4,6 dehydratase 7 326 1.3E-94 T 18-10-2018 IPR016040 NAD(P)-binding domain SHALO_2234 5e373bc87a437332bbe90f55d40007f6 340 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 6 335 7.2E-141 T 18-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 SHALO_2234 5e373bc87a437332bbe90f55d40007f6 340 SUPERFAMILY SSF51735 2 336 1.75E-86 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_2234 5e373bc87a437332bbe90f55d40007f6 340 Gene3D G3DSA:3.90.25.10 207 334 1.7E-125 T 18-10-2018 SHALO_0484 40309a6b6b87164b64ed112ff30653b1 319 Gene3D G3DSA:3.40.50.300 1 236 3.2E-70 T 18-10-2018 SHALO_0484 40309a6b6b87164b64ed112ff30653b1 319 SMART SM00382 26 222 7.9E-15 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_0484 40309a6b6b87164b64ed112ff30653b1 319 SUPERFAMILY SSF52540 1 235 1.39E-76 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0484 40309a6b6b87164b64ed112ff30653b1 319 Pfam PF00005 ABC transporter 17 165 5.9E-34 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_0484 40309a6b6b87164b64ed112ff30653b1 319 SMART SM00930 245 319 7.6E-18 T 18-10-2018 IPR018449 NIL domain SHALO_0484 40309a6b6b87164b64ed112ff30653b1 319 Gene3D G3DSA:3.30.70.260 237 318 2.0E-10 T 18-10-2018 SHALO_0484 40309a6b6b87164b64ed112ff30653b1 319 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_0484 40309a6b6b87164b64ed112ff30653b1 319 SUPERFAMILY SSF55021 231 313 3.55E-16 T 18-10-2018 SHALO_0484 40309a6b6b87164b64ed112ff30653b1 319 Pfam PF09383 NIL domain 248 311 3.9E-15 T 18-10-2018 IPR018449 NIL domain SHALO_2420 5135f92db10c49ee0d73ad86576eac8d 118 SUPERFAMILY SSF53137 9 116 1.12E-36 T 18-10-2018 SHALO_2420 5135f92db10c49ee0d73ad86576eac8d 118 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 9 116 4.3E-35 T 18-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_2420 5135f92db10c49ee0d73ad86576eac8d 118 Gene3D G3DSA:3.30.420.100 7 117 2.8E-29 T 18-10-2018 SHALO_2420 5135f92db10c49ee0d73ad86576eac8d 118 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 8 118 22.754 T 18-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_2420 5135f92db10c49ee0d73ad86576eac8d 118 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 11 117 3.0E-35 T 18-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_1870 070be31effbb31e182e6ae9582c9a176 355 Gene3D G3DSA:3.30.70.100 247 343 5.0E-18 T 18-10-2018 SHALO_1870 070be31effbb31e182e6ae9582c9a176 355 SUPERFAMILY SSF82861 100 180 6.93E-10 T 18-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 SHALO_1870 070be31effbb31e182e6ae9582c9a176 355 Gene3D G3DSA:2.30.30.60 197 246 1.6E-9 T 18-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily SHALO_1870 070be31effbb31e182e6ae9582c9a176 355 SUPERFAMILY SSF82689 248 350 1.83E-18 T 18-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 SHALO_1870 070be31effbb31e182e6ae9582c9a176 355 SUPERFAMILY SSF50182 182 246 5.56E-13 T 18-10-2018 IPR010920 LSM domain superfamily SHALO_1870 070be31effbb31e182e6ae9582c9a176 355 Pfam PF00924 Mechanosensitive ion channel 139 339 4.8E-47 T 18-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 SHALO_2189 32ff2450c562ed5e7bc91a4da84cde4d 135 Gene3D G3DSA:1.10.940.10 1 135 9.6E-39 T 18-10-2018 IPR035926 NusB-like superfamily SHALO_2189 32ff2450c562ed5e7bc91a4da84cde4d 135 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 2 133 20.498 T 18-10-2018 IPR011605 NusB antitermination factor GO:0006353 SHALO_2189 32ff2450c562ed5e7bc91a4da84cde4d 135 Pfam PF01029 NusB family 5 128 4.2E-32 T 18-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 SHALO_2189 32ff2450c562ed5e7bc91a4da84cde4d 135 SUPERFAMILY SSF48013 3 131 4.45E-36 T 18-10-2018 IPR035926 NusB-like superfamily SHALO_2189 32ff2450c562ed5e7bc91a4da84cde4d 135 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 4 130 2.7E-38 T 18-10-2018 IPR011605 NusB antitermination factor GO:0006353 SHALO_2914 ed4d047524d2ee93280b53cfe89390e4 354 PIRSF PIRSF005357 1 348 1.4E-72 T 18-10-2018 IPR007152 Protein of unknown function DUF354 SHALO_2914 ed4d047524d2ee93280b53cfe89390e4 354 SUPERFAMILY SSF53756 98 329 7.63E-15 T 18-10-2018 SHALO_2914 ed4d047524d2ee93280b53cfe89390e4 354 Pfam PF04007 Protein of unknown function (DUF354) 2 334 5.1E-44 T 18-10-2018 IPR007152 Protein of unknown function DUF354 SHALO_1190 fbf8ad69bc72395ddb4ae3856b61e4af 220 Pfam PF03167 Uracil DNA glycosylase superfamily 66 213 1.0E-39 T 18-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 SHALO_1190 fbf8ad69bc72395ddb4ae3856b61e4af 220 SMART SM00986 66 214 3.7E-29 T 18-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 SHALO_1190 fbf8ad69bc72395ddb4ae3856b61e4af 220 Gene3D G3DSA:3.40.470.10 40 220 1.7E-60 T 18-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 SHALO_1190 fbf8ad69bc72395ddb4ae3856b61e4af 220 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 52 219 1.2E-49 T 18-10-2018 IPR005273 Uracil-DNA glycosylase family 4 SHALO_1190 fbf8ad69bc72395ddb4ae3856b61e4af 220 SUPERFAMILY SSF52141 40 219 1.5E-52 T 18-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 SHALO_1190 fbf8ad69bc72395ddb4ae3856b61e4af 220 SMART SM00987 66 214 3.7E-29 T 18-10-2018 SHALO_0090 3f048e2840331628d54e8749d7b20bf0 527 Pfam PF02272 DHHA1 domain 288 404 6.1E-20 T 18-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 SHALO_0090 3f048e2840331628d54e8749d7b20bf0 527 Pfam PF01368 DHH family 55 182 3.1E-10 T 18-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 SHALO_0090 3f048e2840331628d54e8749d7b20bf0 527 SUPERFAMILY SSF64182 30 410 4.97E-103 T 18-10-2018 IPR038763 DHH phosphoesterase superfamily SHALO_0090 3f048e2840331628d54e8749d7b20bf0 527 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 17 522 2.2E-156 T 18-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 SHALO_0090 3f048e2840331628d54e8749d7b20bf0 527 Gene3D G3DSA:3.10.310.30 291 410 2.3E-30 T 18-10-2018 SHALO_0090 3f048e2840331628d54e8749d7b20bf0 527 Gene3D G3DSA:3.90.1640.30 29 290 6.9E-78 T 18-10-2018 SHALO_0011 711bdc39568e5fcc8477418060deb603 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 144 306 1.0E-25 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 SHALO_0011 711bdc39568e5fcc8477418060deb603 341 Gene3D G3DSA:1.10.3720.10 122 310 7.5E-35 T 18-10-2018 IPR035906 MetI-like superfamily SHALO_0011 711bdc39568e5fcc8477418060deb603 341 SUPERFAMILY SSF161098 123 305 5.63E-41 T 18-10-2018 IPR035906 MetI-like superfamily SHALO_1519 b5d45167a6d2a48be9989a121b71007b 214 Gene3D G3DSA:3.40.50.10230 4 212 1.2E-77 T 18-10-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 SHALO_1519 b5d45167a6d2a48be9989a121b71007b 214 Pfam PF02570 Precorrin-8X methylmutase 10 206 1.1E-74 T 18-10-2018 IPR003722 Cobalamin biosynthesis precorrin-8X methylmutase CobH/CbiC GO:0009236|GO:0016993 SHALO_1519 b5d45167a6d2a48be9989a121b71007b 214 SUPERFAMILY SSF63965 9 211 4.84E-69 T 18-10-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 SHALO_2197 614c15b15cc18d65a1a2bfdd38c2970d 179 SUPERFAMILY SSF52540 5 174 4.02E-21 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_2197 614c15b15cc18d65a1a2bfdd38c2970d 179 Gene3D G3DSA:3.40.50.300 4 179 6.8E-45 T 18-10-2018 SHALO_2197 614c15b15cc18d65a1a2bfdd38c2970d 179 Pfam PF01202 Shikimate kinase 15 172 8.7E-28 T 18-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 SHALO_2197 614c15b15cc18d65a1a2bfdd38c2970d 179 Hamap MF_00109 Shikimate kinase [aroK]. 6 173 22.441 T 18-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 SHALO_2197 614c15b15cc18d65a1a2bfdd38c2970d 179 PRINTS PR01100 Shikimate kinase family signature 80 89 2.7E-18 T 18-10-2018 SHALO_2197 614c15b15cc18d65a1a2bfdd38c2970d 179 PRINTS PR01100 Shikimate kinase family signature 97 114 2.7E-18 T 18-10-2018 SHALO_2197 614c15b15cc18d65a1a2bfdd38c2970d 179 PRINTS PR01100 Shikimate kinase family signature 9 24 2.7E-18 T 18-10-2018 SHALO_2197 614c15b15cc18d65a1a2bfdd38c2970d 179 PRINTS PR01100 Shikimate kinase family signature 61 69 2.7E-18 T 18-10-2018 SHALO_2197 614c15b15cc18d65a1a2bfdd38c2970d 179 PRINTS PR01100 Shikimate kinase family signature 33 46 2.7E-18 T 18-10-2018 SHALO_0594 387b87053ad52264c53ee235b46b83e2 249 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 193 210 - T 18-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 SHALO_0594 387b87053ad52264c53ee235b46b83e2 249 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 30 247 2.6E-80 T 18-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 SHALO_0594 387b87053ad52264c53ee235b46b83e2 249 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 27 248 36.161 T 18-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 SHALO_0594 387b87053ad52264c53ee235b46b83e2 249 Gene3D G3DSA:3.40.1180.10 17 249 9.2E-85 T 18-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 SHALO_0594 387b87053ad52264c53ee235b46b83e2 249 Pfam PF01255 Putative undecaprenyl diphosphate synthase 34 247 1.5E-75 T 18-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 SHALO_0594 387b87053ad52264c53ee235b46b83e2 249 SUPERFAMILY SSF64005 30 241 1.83E-75 T 18-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 SHALO_1707 44935eb0f64756d9ee87b18daedfc7d0 498 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 90 409 2.2E-15 T 18-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme SHALO_1707 44935eb0f64756d9ee87b18daedfc7d0 498 Gene3D G3DSA:3.40.50.1100 110 229 3.4E-111 T 18-10-2018 SHALO_1707 44935eb0f64756d9ee87b18daedfc7d0 498 Gene3D G3DSA:3.90.1380.10 1 90 7.1E-12 T 18-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily SHALO_1707 44935eb0f64756d9ee87b18daedfc7d0 498 Pfam PF14821 Threonine synthase N terminus 2 78 1.1E-12 T 18-10-2018 IPR029144 Threonine synthase, N-terminal SHALO_1707 44935eb0f64756d9ee87b18daedfc7d0 498 Gene3D G3DSA:3.40.50.1100 98 440 3.4E-111 T 18-10-2018 SHALO_1707 44935eb0f64756d9ee87b18daedfc7d0 498 SUPERFAMILY SSF53686 9 477 1.6E-127 T 18-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme SHALO_1707 44935eb0f64756d9ee87b18daedfc7d0 498 TIGRFAM TIGR00260 thrC: threonine synthase 80 440 4.2E-82 T 18-10-2018 IPR004450 Threonine synthase-like SHALO_1707 44935eb0f64756d9ee87b18daedfc7d0 498 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 104 118 - T 18-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 SHALO_2897 2f720577e79c88f03cec65a01315fda6 284 SUPERFAMILY SSF109998 27 179 8.63E-21 T 18-10-2018 IPR027304 Trigger factor/SurA domain superfamily SHALO_2897 2f720577e79c88f03cec65a01315fda6 284 Gene3D G3DSA:1.10.4030.30 30 282 4.9E-79 T 18-10-2018 SHALO_2897 2f720577e79c88f03cec65a01315fda6 284 Gene3D G3DSA:3.10.50.40 159 240 4.9E-79 T 18-10-2018 SHALO_1120 c492dc6310ba8fde048d522b68925fa4 168 PIRSF PIRSF002070 1 155 2.9E-30 T 18-10-2018 SHALO_1120 c492dc6310ba8fde048d522b68925fa4 168 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 168 3.1E-51 T 18-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 SHALO_1120 c492dc6310ba8fde048d522b68925fa4 168 SUPERFAMILY SSF50249 1 168 4.11E-48 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold SHALO_1120 c492dc6310ba8fde048d522b68925fa4 168 Hamap MF_00984 Single-stranded DNA-binding protein. 2 109 32.619 T 18-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 SHALO_1120 c492dc6310ba8fde048d522b68925fa4 168 Pfam PF00436 Single-strand binding protein family 2 104 6.4E-34 T 18-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 SHALO_1120 c492dc6310ba8fde048d522b68925fa4 168 Gene3D G3DSA:2.40.50.140 1 119 3.7E-38 T 18-10-2018 SHALO_1184 946fa04cfe7efe7103a94761368d537a 80 SUPERFAMILY SSF47413 6 64 5.63E-13 T 18-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 SHALO_1184 946fa04cfe7efe7103a94761368d537a 80 Pfam PF12844 Helix-turn-helix domain 11 62 3.9E-12 T 18-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SHALO_1184 946fa04cfe7efe7103a94761368d537a 80 Gene3D G3DSA:1.10.260.40 1 75 2.2E-14 T 18-10-2018 SHALO_1184 946fa04cfe7efe7103a94761368d537a 80 SMART SM00530 9 65 5.1E-8 T 18-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SHALO_0993 45a37c03b9c0bdb2a8fccf29acadecf7 215 Pfam PF00196 Bacterial regulatory proteins, luxR family 153 207 2.8E-20 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SHALO_0993 45a37c03b9c0bdb2a8fccf29acadecf7 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 183 8.8E-16 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SHALO_0993 45a37c03b9c0bdb2a8fccf29acadecf7 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 167 8.8E-16 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SHALO_0993 45a37c03b9c0bdb2a8fccf29acadecf7 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 195 8.8E-16 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SHALO_0993 45a37c03b9c0bdb2a8fccf29acadecf7 215 ProSitePatterns PS00622 LuxR-type HTH domain signature. 167 194 - T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SHALO_0993 45a37c03b9c0bdb2a8fccf29acadecf7 215 SUPERFAMILY SSF46894 146 213 5.1E-21 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHALO_0993 45a37c03b9c0bdb2a8fccf29acadecf7 215 Pfam PF00072 Response regulator receiver domain 8 118 4.7E-22 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_0993 45a37c03b9c0bdb2a8fccf29acadecf7 215 SMART SM00421 150 207 1.5E-19 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SHALO_0993 45a37c03b9c0bdb2a8fccf29acadecf7 215 SMART SM00448 5 118 6.4E-23 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_0993 45a37c03b9c0bdb2a8fccf29acadecf7 215 SUPERFAMILY SSF52172 4 134 1.99E-30 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_0993 45a37c03b9c0bdb2a8fccf29acadecf7 215 Gene3D G3DSA:3.40.50.12740 5 213 1.2E-62 T 18-10-2018 SHALO_1745 9febcf4692cd700707a800216b920c22 171 SUPERFAMILY SSF89392 14 170 1.92E-25 T 18-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX SHALO_1745 9febcf4692cd700707a800216b920c22 171 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 20 96 2.5E-9 T 18-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like SHALO_1745 9febcf4692cd700707a800216b920c22 171 Gene3D G3DSA:2.50.20.10 11 171 1.3E-20 T 18-10-2018 SHALO_0943 15bdb4b2ef26f6da51641eca33189366 215 Pfam PF00510 Cytochrome c oxidase subunit III 27 214 2.3E-6 T 18-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_0943 15bdb4b2ef26f6da51641eca33189366 215 Gene3D G3DSA:1.20.120.80 21 215 1.8E-47 T 18-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_0943 15bdb4b2ef26f6da51641eca33189366 215 SUPERFAMILY SSF81452 22 214 3.4E-40 T 18-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_0225 43e01b144638069ed3b8d5db7fa6e57c 304 Gene3D G3DSA:3.30.470.10 1 127 8.0E-40 T 18-10-2018 SHALO_0225 43e01b144638069ed3b8d5db7fa6e57c 304 Gene3D G3DSA:3.20.10.10 128 293 2.0E-52 T 18-10-2018 SHALO_0225 43e01b144638069ed3b8d5db7fa6e57c 304 Pfam PF01063 Amino-transferase class IV 33 265 1.1E-42 T 18-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 SHALO_0225 43e01b144638069ed3b8d5db7fa6e57c 304 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 8 304 1.4E-130 T 18-10-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 SHALO_0225 43e01b144638069ed3b8d5db7fa6e57c 304 SUPERFAMILY SSF56752 3 300 3.4E-95 T 18-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 SHALO_1756 98fcf60ee3981a48243f4bca567c2d7e 119 SUPERFAMILY SSF48695 24 101 2.4E-10 T 18-10-2018 IPR036280 Multiheme cytochrome superfamily SHALO_0060 8524ce94ea2d9d66c94e196b0cf3be67 860 SMART SM00028 526 559 0.22 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_0060 8524ce94ea2d9d66c94e196b0cf3be67 860 SMART SM00028 776 809 55.0 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_0060 8524ce94ea2d9d66c94e196b0cf3be67 860 SMART SM00028 692 725 0.85 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_0060 8524ce94ea2d9d66c94e196b0cf3be67 860 SMART SM00028 734 767 0.033 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_0060 8524ce94ea2d9d66c94e196b0cf3be67 860 SMART SM00028 568 601 0.0019 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_0060 8524ce94ea2d9d66c94e196b0cf3be67 860 SMART SM00028 650 683 0.0037 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_0060 8524ce94ea2d9d66c94e196b0cf3be67 860 SMART SM00028 610 643 0.084 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_0060 8524ce94ea2d9d66c94e196b0cf3be67 860 SUPERFAMILY SSF103642 838 858 3.27E-6 T 18-10-2018 SHALO_0060 8524ce94ea2d9d66c94e196b0cf3be67 860 SUPERFAMILY SSF52540 172 372 8.71E-19 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0060 8524ce94ea2d9d66c94e196b0cf3be67 860 Gene3D G3DSA:1.25.40.10 612 676 9.7E-11 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SHALO_0060 8524ce94ea2d9d66c94e196b0cf3be67 860 SUPERFAMILY SSF48452 644 763 3.79E-20 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SHALO_0060 8524ce94ea2d9d66c94e196b0cf3be67 860 Pfam PF13374 Tetratricopeptide repeat 775 815 1.0E-4 T 18-10-2018 SHALO_0060 8524ce94ea2d9d66c94e196b0cf3be67 860 Pfam PF13424 Tetratricopeptide repeat 691 765 3.4E-15 T 18-10-2018 SHALO_0060 8524ce94ea2d9d66c94e196b0cf3be67 860 Pfam PF13424 Tetratricopeptide repeat 567 641 4.8E-11 T 18-10-2018 SHALO_0060 8524ce94ea2d9d66c94e196b0cf3be67 860 SUPERFAMILY SSF48452 527 684 1.24E-22 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SHALO_0060 8524ce94ea2d9d66c94e196b0cf3be67 860 Pfam PF02810 SEC-C motif 841 858 3.4E-8 T 18-10-2018 IPR004027 SEC-C motif SHALO_0060 8524ce94ea2d9d66c94e196b0cf3be67 860 Gene3D G3DSA:1.25.40.10 677 842 5.9E-37 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SHALO_0060 8524ce94ea2d9d66c94e196b0cf3be67 860 Gene3D G3DSA:3.40.50.300 162 305 3.7E-14 T 18-10-2018 SHALO_0060 8524ce94ea2d9d66c94e196b0cf3be67 860 Gene3D G3DSA:1.25.40.10 507 611 2.8E-16 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SHALO_1197 52bd235a3fc6092dff3a3ad3a7d97c76 593 Pfam PF00990 Diguanylate cyclase, GGDEF domain 179 327 5.7E-18 T 18-10-2018 IPR000160 GGDEF domain SHALO_1197 52bd235a3fc6092dff3a3ad3a7d97c76 593 SUPERFAMILY SSF55073 183 333 6.36E-20 T 18-10-2018 IPR029787 Nucleotide cyclase SHALO_1197 52bd235a3fc6092dff3a3ad3a7d97c76 593 SMART SM00267 167 333 1.5E-12 T 18-10-2018 IPR000160 GGDEF domain SHALO_1197 52bd235a3fc6092dff3a3ad3a7d97c76 593 SMART SM00448 16 143 2.2E-22 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_1197 52bd235a3fc6092dff3a3ad3a7d97c76 593 Gene3D G3DSA:3.30.70.270 166 332 1.1E-22 T 18-10-2018 SHALO_1197 52bd235a3fc6092dff3a3ad3a7d97c76 593 Gene3D G3DSA:3.20.20.450 346 589 3.2E-56 T 18-10-2018 IPR035919 EAL domain superfamily SHALO_1197 52bd235a3fc6092dff3a3ad3a7d97c76 593 SMART SM00052 344 590 6.4E-38 T 18-10-2018 IPR001633 EAL domain SHALO_1197 52bd235a3fc6092dff3a3ad3a7d97c76 593 SUPERFAMILY SSF141868 352 586 1.57E-55 T 18-10-2018 IPR035919 EAL domain superfamily SHALO_1197 52bd235a3fc6092dff3a3ad3a7d97c76 593 SUPERFAMILY SSF52172 15 176 3.7E-29 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_1197 52bd235a3fc6092dff3a3ad3a7d97c76 593 Pfam PF00563 EAL domain 352 585 1.4E-49 T 18-10-2018 IPR001633 EAL domain SHALO_1197 52bd235a3fc6092dff3a3ad3a7d97c76 593 Pfam PF00072 Response regulator receiver domain 18 142 4.2E-20 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_1197 52bd235a3fc6092dff3a3ad3a7d97c76 593 Gene3D G3DSA:3.40.50.2300 5 165 5.4E-29 T 18-10-2018 SHALO_1197 52bd235a3fc6092dff3a3ad3a7d97c76 593 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 174 332 3.5E-14 T 18-10-2018 IPR000160 GGDEF domain SHALO_2741 031fba67de3e55ae808d58df8bdfd696 234 TIGRFAM TIGR03425 urea_degr_2: urea carboxylase-associated protein 2 7 234 6.1E-79 T 18-10-2018 IPR017792 Urea carboxylase-associated protein 2 SHALO_2741 031fba67de3e55ae808d58df8bdfd696 234 Pfam PF09347 Domain of unknown function (DUF1989) 11 183 1.8E-44 T 18-10-2018 IPR018959 Protein of unknown function DUF1989 SHALO_2018 e5f45010998760a3b4ca46b108763321 197 Pfam PF01063 Amino-transferase class IV 106 193 1.4E-11 T 18-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 SHALO_2018 e5f45010998760a3b4ca46b108763321 197 Gene3D G3DSA:3.30.470.10 7 81 4.0E-13 T 18-10-2018 SHALO_2018 e5f45010998760a3b4ca46b108763321 197 Gene3D G3DSA:3.20.10.10 83 187 1.0E-20 T 18-10-2018 SHALO_2018 e5f45010998760a3b4ca46b108763321 197 SUPERFAMILY SSF56752 10 190 2.49E-21 T 18-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 SHALO_1491 5d4b6a6d71c2af3be6a91c597faee651 187 SUPERFAMILY SSF142695 3 165 1.18E-47 T 18-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 SHALO_1491 5d4b6a6d71c2af3be6a91c597faee651 187 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 7 187 8.9E-73 T 18-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 SHALO_1491 5d4b6a6d71c2af3be6a91c597faee651 187 Gene3D G3DSA:3.40.50.10990 1 167 2.2E-65 T 18-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 SHALO_1491 5d4b6a6d71c2af3be6a91c597faee651 187 Pfam PF00925 GTP cyclohydrolase II 9 161 4.7E-57 T 18-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 SHALO_1491 5d4b6a6d71c2af3be6a91c597faee651 187 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 1 187 36.102 T 18-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 SHALO_2751 0ce59ed596077bf158d3861f7660fa1f 227 Pfam PF00072 Response regulator receiver domain 8 117 7.9E-22 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_2751 0ce59ed596077bf158d3861f7660fa1f 227 SMART SM00862 150 226 2.8E-21 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_2751 0ce59ed596077bf158d3861f7660fa1f 227 SMART SM00448 6 116 4.6E-27 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_2751 0ce59ed596077bf158d3861f7660fa1f 227 SUPERFAMILY SSF52172 4 175 4.32E-33 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_2751 0ce59ed596077bf158d3861f7660fa1f 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 226 7.1E-22 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_2751 0ce59ed596077bf158d3861f7660fa1f 227 Gene3D G3DSA:3.40.50.2300 1 123 1.2E-29 T 18-10-2018 SHALO_2751 0ce59ed596077bf158d3861f7660fa1f 227 Gene3D G3DSA:1.10.10.10 124 227 1.7E-30 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_0713 b490881bd5825af5518da47b76681c2a 184 Pfam PF04229 GrpB protein 11 173 4.9E-36 T 18-10-2018 IPR007344 GrpB/Dephospho-CoA kinase SHALO_0713 b490881bd5825af5518da47b76681c2a 184 SUPERFAMILY SSF81301 14 179 5.89E-35 T 18-10-2018 SHALO_0713 b490881bd5825af5518da47b76681c2a 184 Gene3D G3DSA:3.30.460.10 8 180 3.5E-40 T 18-10-2018 SHALO_0676 34ceb536278a9de0cc9f731d3527127e 285 Gene3D G3DSA:3.90.1530.30 47 109 1.5E-24 T 18-10-2018 SHALO_0676 34ceb536278a9de0cc9f731d3527127e 285 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 34 205 2.0E-54 T 18-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 SHALO_0676 34ceb536278a9de0cc9f731d3527127e 285 Pfam PF02195 ParB-like nuclease domain 36 123 2.7E-23 T 18-10-2018 IPR003115 ParB/Sulfiredoxin SHALO_0676 34ceb536278a9de0cc9f731d3527127e 285 Gene3D G3DSA:1.10.10.2830 111 223 8.3E-32 T 18-10-2018 SHALO_0676 34ceb536278a9de0cc9f731d3527127e 285 SUPERFAMILY SSF110849 36 169 1.73E-32 T 18-10-2018 IPR036086 ParB/Sulfiredoxin superfamily SHALO_0676 34ceb536278a9de0cc9f731d3527127e 285 SMART SM00470 34 123 7.9E-30 T 18-10-2018 IPR003115 ParB/Sulfiredoxin SHALO_2960 792d903e0e88078ec7745d36d16482c2 421 Gene3D G3DSA:3.30.499.10 273 421 7.0E-54 T 18-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 SHALO_2960 792d903e0e88078ec7745d36d16482c2 421 Gene3D G3DSA:3.30.499.20 4 270 4.6E-92 T 18-10-2018 SHALO_2960 792d903e0e88078ec7745d36d16482c2 421 ProSitePatterns PS00450 Aconitase family signature 1. 294 310 - T 18-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 SHALO_2960 792d903e0e88078ec7745d36d16482c2 421 Hamap MF_01027 3-isopropylmalate dehydratase large subunit [leuC]. 3 421 47.25 T 18-10-2018 IPR011826 Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 SHALO_2960 792d903e0e88078ec7745d36d16482c2 421 SUPERFAMILY SSF53732 1 420 4.19E-140 T 18-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 SHALO_2960 792d903e0e88078ec7745d36d16482c2 421 TIGRFAM TIGR01343 hacA_fam: homoaconitate hydratase family protein 4 419 1.7E-171 T 18-10-2018 IPR006251 Homoaconitase/3-isopropylmalate dehydratase, large subunit GO:0008652|GO:0016836|GO:0051539 KEGG: 00290+4.2.1.33 SHALO_2960 792d903e0e88078ec7745d36d16482c2 421 Pfam PF00330 Aconitase family (aconitate hydratase) 7 413 1.0E-91 T 18-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 SHALO_2960 792d903e0e88078ec7745d36d16482c2 421 PRINTS PR00415 Aconitase family signature 189 202 1.1E-22 T 18-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 SHALO_2960 792d903e0e88078ec7745d36d16482c2 421 PRINTS PR00415 Aconitase family signature 203 216 1.1E-22 T 18-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 SHALO_2960 792d903e0e88078ec7745d36d16482c2 421 PRINTS PR00415 Aconitase family signature 298 309 1.1E-22 T 18-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 SHALO_2960 792d903e0e88078ec7745d36d16482c2 421 PRINTS PR00415 Aconitase family signature 354 367 1.1E-22 T 18-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 SHALO_2960 792d903e0e88078ec7745d36d16482c2 421 PRINTS PR00415 Aconitase family signature 113 126 1.1E-22 T 18-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 SHALO_2960 792d903e0e88078ec7745d36d16482c2 421 PRINTS PR00415 Aconitase family signature 127 142 1.1E-22 T 18-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 SHALO_2960 792d903e0e88078ec7745d36d16482c2 421 TIGRFAM TIGR02086 IPMI_arch: 3-isopropylmalate dehydratase, large subunit 3 419 2.4E-156 T 18-10-2018 IPR011826 Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 SHALO_2960 792d903e0e88078ec7745d36d16482c2 421 TIGRFAM TIGR02083 LEU2: 3-isopropylmalate dehydratase, large subunit 4 420 3.8E-189 T 18-10-2018 IPR011823 3-isopropylmalate dehydratase, large subunit, bacteria GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 SHALO_2884 d78c3aaeb8a3e69990a873e804521a31 290 Gene3D G3DSA:3.40.190.10 117 225 4.2E-48 T 18-10-2018 SHALO_2884 d78c3aaeb8a3e69990a873e804521a31 290 SUPERFAMILY SSF53850 30 258 4.31E-35 T 18-10-2018 SHALO_2884 d78c3aaeb8a3e69990a873e804521a31 290 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 31 250 2.5E-36 T 18-10-2018 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 SHALO_2884 d78c3aaeb8a3e69990a873e804521a31 290 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 52 274 1.8E-48 T 18-10-2018 SHALO_2884 d78c3aaeb8a3e69990a873e804521a31 290 Gene3D G3DSA:3.40.190.10 53 256 4.2E-48 T 18-10-2018 SHALO_2627 159b24b763ddee9a11e5287605fae748 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 226 6.3E-15 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_2627 159b24b763ddee9a11e5287605fae748 229 Gene3D G3DSA:3.40.50.2300 9 131 6.9E-30 T 18-10-2018 SHALO_2627 159b24b763ddee9a11e5287605fae748 229 SUPERFAMILY SSF46894 156 226 1.63E-12 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHALO_2627 159b24b763ddee9a11e5287605fae748 229 Gene3D G3DSA:1.10.10.10 142 229 1.8E-18 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_2627 159b24b763ddee9a11e5287605fae748 229 SUPERFAMILY SSF52172 11 178 1.17E-33 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_2627 159b24b763ddee9a11e5287605fae748 229 SMART SM00862 157 227 1.2E-14 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_2627 159b24b763ddee9a11e5287605fae748 229 SMART SM00448 13 124 6.3E-28 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_2627 159b24b763ddee9a11e5287605fae748 229 Pfam PF00072 Response regulator receiver domain 15 124 7.5E-25 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_1145 67505d7386c3e11cc3ce1bf23ebcdcc8 247 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 37 207 5.6E-32 T 18-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase SHALO_1145 67505d7386c3e11cc3ce1bf23ebcdcc8 247 Gene3D G3DSA:3.40.50.10420 35 218 5.0E-30 T 18-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily SHALO_1145 67505d7386c3e11cc3ce1bf23ebcdcc8 247 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 39 207 2.2E-19 T 18-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase SHALO_1145 67505d7386c3e11cc3ce1bf23ebcdcc8 247 SUPERFAMILY SSF100950 36 213 1.4E-34 T 18-10-2018 IPR037171 NagB/RpiA transferase-like SHALO_1145 67505d7386c3e11cc3ce1bf23ebcdcc8 247 PIRSF PIRSF006806 32 209 1.0E-22 T 18-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase SHALO_2729 2b21ac6ac091999e1885d0e2e1ae8d38 207 PIRSF PIRSF006324 1 206 2.0E-52 T 18-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 SHALO_2729 2b21ac6ac091999e1885d0e2e1ae8d38 207 Pfam PF01810 LysE type translocator 14 203 1.8E-33 T 18-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 SHALO_2892 a864c797ea4bb39e4fc21f5b9f2b0e61 218 Gene3D G3DSA:3.40.190.10 1 105 2.7E-15 T 18-10-2018 SHALO_2892 a864c797ea4bb39e4fc21f5b9f2b0e61 218 Gene3D G3DSA:3.40.190.10 114 218 1.2E-11 T 18-10-2018 SHALO_2892 a864c797ea4bb39e4fc21f5b9f2b0e61 218 Hamap MF_00995 Chorismate dehydratase [mqnA]. 2 218 20.048 T 18-10-2018 IPR030868 Chorismate dehydratase GO:0009234|GO:0016829 KEGG: 00130+4.2.1.151|MetaCyc: PWY-7371|MetaCyc: PWY-7374 SHALO_2892 a864c797ea4bb39e4fc21f5b9f2b0e61 218 Pfam PF02621 Menaquinone biosynthesis 108 216 4.7E-11 T 18-10-2018 IPR003773 Menaquinone biosynthesis enzyme SHALO_2892 a864c797ea4bb39e4fc21f5b9f2b0e61 218 Pfam PF02621 Menaquinone biosynthesis 4 85 6.4E-6 T 18-10-2018 IPR003773 Menaquinone biosynthesis enzyme SHALO_2892 a864c797ea4bb39e4fc21f5b9f2b0e61 218 SUPERFAMILY SSF53850 1 217 1.85E-47 T 18-10-2018 SHALO_0865 74e45058f8aae9cfa5cdaeb7df5982cf 413 SUPERFAMILY SSF54106 368 411 4.71E-8 T 18-10-2018 SHALO_0865 74e45058f8aae9cfa5cdaeb7df5982cf 413 Gene3D G3DSA:1.10.530.10 69 217 3.8E-32 T 18-10-2018 SHALO_0865 74e45058f8aae9cfa5cdaeb7df5982cf 413 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 92 120 - T 18-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 SHALO_0865 74e45058f8aae9cfa5cdaeb7df5982cf 413 Pfam PF01476 LysM domain 369 411 9.6E-8 T 18-10-2018 IPR018392 LysM domain SHALO_0865 74e45058f8aae9cfa5cdaeb7df5982cf 413 Pfam PF01476 LysM domain 308 350 1.5E-11 T 18-10-2018 IPR018392 LysM domain SHALO_0865 74e45058f8aae9cfa5cdaeb7df5982cf 413 Gene3D G3DSA:3.10.350.10 367 411 2.6E-11 T 18-10-2018 IPR036779 LysM domain superfamily SHALO_0865 74e45058f8aae9cfa5cdaeb7df5982cf 413 SUPERFAMILY SSF54106 306 350 2.75E-9 T 18-10-2018 SHALO_0865 74e45058f8aae9cfa5cdaeb7df5982cf 413 SMART SM00257 238 285 7.3 T 18-10-2018 IPR018392 LysM domain SHALO_0865 74e45058f8aae9cfa5cdaeb7df5982cf 413 SMART SM00257 368 411 1.8E-10 T 18-10-2018 IPR018392 LysM domain SHALO_0865 74e45058f8aae9cfa5cdaeb7df5982cf 413 SMART SM00257 307 350 1.3E-10 T 18-10-2018 IPR018392 LysM domain SHALO_0865 74e45058f8aae9cfa5cdaeb7df5982cf 413 Gene3D G3DSA:3.10.350.10 291 354 2.6E-14 T 18-10-2018 IPR036779 LysM domain superfamily SHALO_0865 74e45058f8aae9cfa5cdaeb7df5982cf 413 Pfam PF01464 Transglycosylase SLT domain 80 184 2.9E-27 T 18-10-2018 IPR008258 Transglycosylase SLT domain 1 SHALO_0865 74e45058f8aae9cfa5cdaeb7df5982cf 413 SUPERFAMILY SSF53955 71 210 1.58E-35 T 18-10-2018 IPR023346 Lysozyme-like domain superfamily SHALO_0531 241a89dbf2f497223c0786711bd525b8 197 Pfam PF10543 ORF6N domain 15 98 1.3E-30 T 18-10-2018 IPR018873 KilA-N, DNA-binding domain SHALO_1258 067c0adf2aa17f4c752cde5494a2656b 188 SUPERFAMILY SSF46626 114 181 1.89E-6 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_1258 067c0adf2aa17f4c752cde5494a2656b 188 Gene3D G3DSA:1.10.760.10 126 182 1.8E-5 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_2002 565f71f625d5c572ace0e7e7af4037c4 91 Pfam PF02699 Preprotein translocase subunit 10 87 1.8E-30 T 18-10-2018 IPR003849 Preprotein translocase YajC SHALO_2002 565f71f625d5c572ace0e7e7af4037c4 91 SMART SM01323 6 89 2.0E-42 T 18-10-2018 IPR003849 Preprotein translocase YajC SHALO_2002 565f71f625d5c572ace0e7e7af4037c4 91 PRINTS PR01853 Bacterial YajC preprotein translocase signature 8 28 7.9E-17 T 18-10-2018 IPR003849 Preprotein translocase YajC SHALO_2002 565f71f625d5c572ace0e7e7af4037c4 91 PRINTS PR01853 Bacterial YajC preprotein translocase signature 28 46 7.9E-17 T 18-10-2018 IPR003849 Preprotein translocase YajC SHALO_2002 565f71f625d5c572ace0e7e7af4037c4 91 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 7 89 5.4E-31 T 18-10-2018 IPR003849 Preprotein translocase YajC SHALO_0886 5fd1ea27edd799e4e9c4d87e42e0978a 750 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 338 522 3.0E-53 T 18-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 SHALO_0886 5fd1ea27edd799e4e9c4d87e42e0978a 750 Gene3D G3DSA:3.40.50.620 24 244 4.4E-96 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_0886 5fd1ea27edd799e4e9c4d87e42e0978a 750 Gene3D G3DSA:2.40.240.10 338 540 4.2E-71 T 18-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 SHALO_0886 5fd1ea27edd799e4e9c4d87e42e0978a 750 SMART SM00845 604 747 5.0E-56 T 18-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 SHALO_0886 5fd1ea27edd799e4e9c4d87e42e0978a 750 Gene3D G3DSA:1.10.1160.10 258 336 7.4E-32 T 18-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 SHALO_0886 5fd1ea27edd799e4e9c4d87e42e0978a 750 SUPERFAMILY SSF89095 577 675 1.92E-17 T 18-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 SHALO_0886 5fd1ea27edd799e4e9c4d87e42e0978a 750 SUPERFAMILY SSF50715 337 542 2.41E-62 T 18-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 SHALO_0886 5fd1ea27edd799e4e9c4d87e42e0978a 750 SUPERFAMILY SSF52374 10 334 2.17E-90 T 18-10-2018 SHALO_0886 5fd1ea27edd799e4e9c4d87e42e0978a 750 PRINTS PR00987 Glutamyl-tRNA synthetase signature 27 39 8.0E-8 T 18-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 SHALO_0886 5fd1ea27edd799e4e9c4d87e42e0978a 750 PRINTS PR00987 Glutamyl-tRNA synthetase signature 56 69 8.0E-8 T 18-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 SHALO_0886 5fd1ea27edd799e4e9c4d87e42e0978a 750 PRINTS PR00987 Glutamyl-tRNA synthetase signature 206 216 8.0E-8 T 18-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 SHALO_0886 5fd1ea27edd799e4e9c4d87e42e0978a 750 PRINTS PR00987 Glutamyl-tRNA synthetase signature 41 52 8.0E-8 T 18-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 SHALO_0886 5fd1ea27edd799e4e9c4d87e42e0978a 750 Pfam PF02637 GatB domain 605 747 1.0E-40 T 18-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 SHALO_0886 5fd1ea27edd799e4e9c4d87e42e0978a 750 Gene3D G3DSA:1.10.150.380 577 685 6.1E-24 T 18-10-2018 SHALO_0886 5fd1ea27edd799e4e9c4d87e42e0978a 750 SUPERFAMILY SSF89095 636 747 4.88E-19 T 18-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 SHALO_0886 5fd1ea27edd799e4e9c4d87e42e0978a 750 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 30 41 - T 18-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_0886 5fd1ea27edd799e4e9c4d87e42e0978a 750 Gene3D G3DSA:3.90.800.10 97 205 4.4E-96 T 18-10-2018 SHALO_0886 5fd1ea27edd799e4e9c4d87e42e0978a 750 Gene3D G3DSA:1.10.10.410 687 749 1.1E-22 T 18-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal SHALO_0886 5fd1ea27edd799e4e9c4d87e42e0978a 750 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 25 545 3.0E-210 T 18-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 SHALO_0886 5fd1ea27edd799e4e9c4d87e42e0978a 750 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 24 334 9.9E-102 T 18-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 SHALO_0886 5fd1ea27edd799e4e9c4d87e42e0978a 750 Gene3D G3DSA:2.40.240.10 345 462 4.2E-71 T 18-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 SHALO_2044 47270333c1d01af1469bcf97377b5adf 259 Gene3D G3DSA:3.20.20.140 2 259 3.6E-76 T 18-10-2018 SHALO_2044 47270333c1d01af1469bcf97377b5adf 259 Pfam PF02811 PHP domain 4 188 1.4E-13 T 18-10-2018 IPR004013 PHP domain GO:0003824 SHALO_2044 47270333c1d01af1469bcf97377b5adf 259 SUPERFAMILY SSF89550 1 257 1.09E-50 T 18-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 SHALO_2044 47270333c1d01af1469bcf97377b5adf 259 TIGRFAM TIGR01856 hisJ_fam: histidinol phosphate phosphatase, HisJ family 3 232 2.5E-54 T 18-10-2018 IPR010140 Histidinol phosphate phosphatase, HisJ GO:0000105|GO:0004401 KEGG: 00340+3.1.3.15 SHALO_1072 af982536c52ac57d4e4c3c1b642c52c0 208 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 7 205 23.084 T 18-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 SHALO_1072 af982536c52ac57d4e4c3c1b642c52c0 208 Pfam PF02581 Thiamine monophosphate synthase 10 191 2.8E-55 T 18-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 SHALO_1072 af982536c52ac57d4e4c3c1b642c52c0 208 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 10 203 5.9E-57 T 18-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 SHALO_1072 af982536c52ac57d4e4c3c1b642c52c0 208 SUPERFAMILY SSF51391 7 205 1.1E-53 T 18-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 SHALO_1072 af982536c52ac57d4e4c3c1b642c52c0 208 Gene3D G3DSA:3.20.20.70 3 208 1.0E-54 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_0382 2bfd46391ac1b4edae2544388ffb780b 352 SUPERFAMILY SSF103039 45 229 4.45E-27 T 18-10-2018 IPR028976 CheC-like superfamily SHALO_0382 2bfd46391ac1b4edae2544388ffb780b 352 PRINTS PR00955 Flagellar motor switch protein FliM signature 211 229 1.9E-29 T 18-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 SHALO_0382 2bfd46391ac1b4edae2544388ffb780b 352 PRINTS PR00955 Flagellar motor switch protein FliM signature 115 134 1.9E-29 T 18-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 SHALO_0382 2bfd46391ac1b4edae2544388ffb780b 352 PRINTS PR00955 Flagellar motor switch protein FliM signature 2 15 1.9E-29 T 18-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 SHALO_0382 2bfd46391ac1b4edae2544388ffb780b 352 PRINTS PR00955 Flagellar motor switch protein FliM signature 90 106 1.9E-29 T 18-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 SHALO_0382 2bfd46391ac1b4edae2544388ffb780b 352 Gene3D G3DSA:2.30.330.10 238 331 5.0E-7 T 18-10-2018 IPR036429 SpoA-like superfamily SHALO_0382 2bfd46391ac1b4edae2544388ffb780b 352 Gene3D G3DSA:3.40.1550.10 47 236 6.3E-60 T 18-10-2018 IPR028976 CheC-like superfamily SHALO_0382 2bfd46391ac1b4edae2544388ffb780b 352 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 253 322 8.6E-15 T 18-10-2018 IPR001543 Surface presentation of antigen (SpoA) SHALO_0382 2bfd46391ac1b4edae2544388ffb780b 352 Pfam PF02154 Flagellar motor switch protein FliM 39 229 4.0E-76 T 18-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 SHALO_0382 2bfd46391ac1b4edae2544388ffb780b 352 SUPERFAMILY SSF101801 249 327 1.2E-13 T 18-10-2018 IPR036429 SpoA-like superfamily SHALO_0382 2bfd46391ac1b4edae2544388ffb780b 352 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 3 321 2.5E-103 T 18-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 SHALO_0382 2bfd46391ac1b4edae2544388ffb780b 352 PIRSF PIRSF002888 1 332 4.0E-109 T 18-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 SHALO_0236 75361db09acb47cfa87261963f89f135 146 SUPERFAMILY SSF55821 22 146 2.9E-9 T 18-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily SHALO_1128 3f5b3c388f1696bbd17b05764b099e36 378 Gene3D G3DSA:3.20.20.370 165 378 9.4E-62 T 18-10-2018 SHALO_1128 3f5b3c388f1696bbd17b05764b099e36 378 Pfam PF04748 Divergent polysaccharide deacetylase 172 378 1.0E-58 T 18-10-2018 IPR006837 Divergent polysaccharide deacetylase SHALO_1128 3f5b3c388f1696bbd17b05764b099e36 378 SUPERFAMILY SSF88713 168 378 3.11E-59 T 18-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 SHALO_1193 c64cce9052862a2fcaa5a1d4e37f4eba 370 Gene3D G3DSA:3.20.20.70 1 264 1.1E-73 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_1193 c64cce9052862a2fcaa5a1d4e37f4eba 370 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 8 24 - T 18-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 SHALO_1193 c64cce9052862a2fcaa5a1d4e37f4eba 370 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 187 200 - T 18-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 SHALO_1193 c64cce9052862a2fcaa5a1d4e37f4eba 370 Pfam PF00682 HMGL-like 2 239 3.9E-66 T 18-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 SHALO_1193 c64cce9052862a2fcaa5a1d4e37f4eba 370 SUPERFAMILY SSF51569 2 276 7.51E-69 T 18-10-2018 SHALO_1193 c64cce9052862a2fcaa5a1d4e37f4eba 370 TIGRFAM TIGR02660 nifV_homocitr: homocitrate synthase 2 364 3.6E-144 T 18-10-2018 IPR013477 Homocitrate synthase NifV-like GO:0046912|GO:0051188 KEGG: 00300+2.3.3.14|KEGG: 00620+2.3.3.14|MetaCyc: PWY-3081|MetaCyc: PWY-7710 SHALO_1193 c64cce9052862a2fcaa5a1d4e37f4eba 370 Gene3D G3DSA:1.10.238.260 265 369 5.0E-25 T 18-10-2018 SHALO_0428 303c387a093d3bb90b5da1a6dbfd6285 372 Pfam PF00149 Calcineurin-like phosphoesterase 2 201 1.0E-14 T 18-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 SHALO_0428 303c387a093d3bb90b5da1a6dbfd6285 372 Gene3D G3DSA:3.60.21.10 1 261 3.8E-49 T 18-10-2018 IPR029052 Metallo-dependent phosphatase-like SHALO_0428 303c387a093d3bb90b5da1a6dbfd6285 372 SUPERFAMILY SSF56300 2 293 2.39E-44 T 18-10-2018 SHALO_0088 37426d1a89502392ad2abe4d88728379 289 Gene3D G3DSA:3.90.550.10 15 288 1.9E-83 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_0088 37426d1a89502392ad2abe4d88728379 289 SUPERFAMILY SSF53448 15 286 2.7E-63 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_0088 37426d1a89502392ad2abe4d88728379 289 Pfam PF00483 Nucleotidyl transferase 23 283 1.1E-30 T 18-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 SHALO_0088 37426d1a89502392ad2abe4d88728379 289 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 16 280 2.6E-121 T 18-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 SHALO_1395 cb3d97ebc8d070d458de849bb2a96b05 421 Pfam PF00342 Phosphoglucose isomerase 51 405 4.8E-39 T 18-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_1395 cb3d97ebc8d070d458de849bb2a96b05 421 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 385 402 - T 18-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_1395 cb3d97ebc8d070d458de849bb2a96b05 421 PRINTS PR00662 Glucose-6-phosphate isomerase signature 168 186 4.5E-21 T 18-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_1395 cb3d97ebc8d070d458de849bb2a96b05 421 PRINTS PR00662 Glucose-6-phosphate isomerase signature 353 371 4.5E-21 T 18-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_1395 cb3d97ebc8d070d458de849bb2a96b05 421 PRINTS PR00662 Glucose-6-phosphate isomerase signature 242 263 4.5E-21 T 18-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_1395 cb3d97ebc8d070d458de849bb2a96b05 421 PRINTS PR00662 Glucose-6-phosphate isomerase signature 58 77 4.5E-21 T 18-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_1395 cb3d97ebc8d070d458de849bb2a96b05 421 PRINTS PR00662 Glucose-6-phosphate isomerase signature 371 385 4.5E-21 T 18-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_1395 cb3d97ebc8d070d458de849bb2a96b05 421 PRINTS PR00662 Glucose-6-phosphate isomerase signature 385 398 4.5E-21 T 18-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_1395 cb3d97ebc8d070d458de849bb2a96b05 421 SUPERFAMILY SSF53697 37 409 4.31E-98 T 18-10-2018 SHALO_1395 cb3d97ebc8d070d458de849bb2a96b05 421 Gene3D G3DSA:3.40.50.10490 27 409 1.4E-105 T 18-10-2018 SHALO_1395 cb3d97ebc8d070d458de849bb2a96b05 421 Gene3D G3DSA:3.40.50.10490 34 192 1.4E-105 T 18-10-2018 SHALO_1395 cb3d97ebc8d070d458de849bb2a96b05 421 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 2 412 22.562 T 18-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_1041 98cd9dce91f4326336a27444a75e586f 441 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 28 441 1.6E-121 T 18-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 SHALO_1041 98cd9dce91f4326336a27444a75e586f 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 305 326 2.3E-41 T 18-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SHALO_1041 98cd9dce91f4326336a27444a75e586f 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 362 385 2.3E-41 T 18-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SHALO_1041 98cd9dce91f4326336a27444a75e586f 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 338 362 2.3E-41 T 18-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SHALO_1041 98cd9dce91f4326336a27444a75e586f 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 405 420 2.3E-41 T 18-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SHALO_1041 98cd9dce91f4326336a27444a75e586f 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 78 98 2.3E-41 T 18-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SHALO_1041 98cd9dce91f4326336a27444a75e586f 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 36 59 2.3E-41 T 18-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SHALO_1041 98cd9dce91f4326336a27444a75e586f 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 420 440 2.3E-41 T 18-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SHALO_1041 98cd9dce91f4326336a27444a75e586f 441 Gene3D G3DSA:2.40.30.170 330 418 2.4E-10 T 18-10-2018 SHALO_1041 98cd9dce91f4326336a27444a75e586f 441 Gene3D G3DSA:2.40.50.100 293 329 2.4E-10 T 18-10-2018 SHALO_1041 98cd9dce91f4326336a27444a75e586f 441 Gene3D G3DSA:2.40.30.170 56 65 8.1E-8 T 18-10-2018 SHALO_1041 98cd9dce91f4326336a27444a75e586f 441 Pfam PF13533 Biotin-lipoyl like 75 101 4.0E-6 T 18-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain SHALO_1041 98cd9dce91f4326336a27444a75e586f 441 ProSitePatterns PS00543 HlyD family secretion proteins signature. 405 427 - T 18-10-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 SHALO_1041 98cd9dce91f4326336a27444a75e586f 441 Gene3D G3DSA:1.10.287.470 101 190 8.1E-8 T 18-10-2018 SHALO_1041 98cd9dce91f4326336a27444a75e586f 441 Gene3D G3DSA:2.40.50.100 66 100 8.1E-8 T 18-10-2018 SHALO_1041 98cd9dce91f4326336a27444a75e586f 441 Gene3D G3DSA:1.10.287.470 243 292 2.4E-10 T 18-10-2018 SHALO_1041 98cd9dce91f4326336a27444a75e586f 441 Pfam PF13437 HlyD family secretion protein 293 406 4.6E-16 T 18-10-2018 SHALO_2889 0cd135f2d8e417eb21ec5166fc64b48a 564 SUPERFAMILY SSF58104 255 564 2.88E-52 T 18-10-2018 SHALO_2889 0cd135f2d8e417eb21ec5166fc64b48a 564 SMART SM00304 235 287 0.003 T 18-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 SHALO_2889 0cd135f2d8e417eb21ec5166fc64b48a 564 Gene3D G3DSA:1.10.287.950 236 564 7.9E-54 T 18-10-2018 SHALO_2889 0cd135f2d8e417eb21ec5166fc64b48a 564 SMART SM00283 302 563 6.8E-36 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_2889 0cd135f2d8e417eb21ec5166fc64b48a 564 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 378 528 1.7E-34 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_2931 8200d69e2795628f123c676d012aac1c 428 PIRSF PIRSF001369 39 426 7.8E-148 T 18-10-2018 IPR024176 Citrate synthase, bacterial-type SHALO_2931 8200d69e2795628f123c676d012aac1c 428 ProSitePatterns PS00480 Citrate synthase signature. 305 317 - T 18-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 SHALO_2931 8200d69e2795628f123c676d012aac1c 428 Gene3D G3DSA:1.10.580.10 59 413 3.3E-136 T 18-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 SHALO_2931 8200d69e2795628f123c676d012aac1c 428 PRINTS PR00143 Citrate synthase signature 221 236 1.1E-49 T 18-10-2018 IPR002020 Citrate synthase GO:0046912 SHALO_2931 8200d69e2795628f123c676d012aac1c 428 PRINTS PR00143 Citrate synthase signature 167 180 1.1E-49 T 18-10-2018 IPR002020 Citrate synthase GO:0046912 SHALO_2931 8200d69e2795628f123c676d012aac1c 428 PRINTS PR00143 Citrate synthase signature 298 318 1.1E-49 T 18-10-2018 IPR002020 Citrate synthase GO:0046912 SHALO_2931 8200d69e2795628f123c676d012aac1c 428 PRINTS PR00143 Citrate synthase signature 243 271 1.1E-49 T 18-10-2018 IPR002020 Citrate synthase GO:0046912 SHALO_2931 8200d69e2795628f123c676d012aac1c 428 PRINTS PR00143 Citrate synthase signature 361 377 1.1E-49 T 18-10-2018 IPR002020 Citrate synthase GO:0046912 SHALO_2931 8200d69e2795628f123c676d012aac1c 428 PRINTS PR00143 Citrate synthase signature 381 395 1.1E-49 T 18-10-2018 IPR002020 Citrate synthase GO:0046912 SHALO_2931 8200d69e2795628f123c676d012aac1c 428 Gene3D G3DSA:1.10.230.10 270 378 3.3E-136 T 18-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain SHALO_2931 8200d69e2795628f123c676d012aac1c 428 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 15 422 2.2E-170 T 18-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 SHALO_2931 8200d69e2795628f123c676d012aac1c 428 Gene3D G3DSA:2.20.28.60 4 52 6.3E-17 T 18-10-2018 SHALO_2931 8200d69e2795628f123c676d012aac1c 428 SUPERFAMILY SSF48256 8 422 1.06E-151 T 18-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 SHALO_2931 8200d69e2795628f123c676d012aac1c 428 Pfam PF00285 Citrate synthase, C-terminal domain 48 413 1.8E-125 T 18-10-2018 IPR002020 Citrate synthase GO:0046912 SHALO_1863 fca13b6f73926488f203149d468655d9 90 Pfam PF02583 Metal-sensitive transcriptional repressor 7 86 2.7E-21 T 18-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 SHALO_1863 fca13b6f73926488f203149d468655d9 90 Gene3D G3DSA:1.20.58.1000 1 90 1.2E-26 T 18-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily SHALO_1634 f60eb47362d05744df1425d2477a7882 186 SUPERFAMILY SSF117457 5 177 3.4E-63 T 18-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 SHALO_1634 f60eb47362d05744df1425d2477a7882 186 Pfam PF05683 Fumarase C-terminus 11 177 2.2E-56 T 18-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 SHALO_1634 f60eb47362d05744df1425d2477a7882 186 Gene3D G3DSA:3.20.130.10 1 177 1.0E-70 T 18-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 SHALO_1634 f60eb47362d05744df1425d2477a7882 186 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 15 177 1.9E-54 T 18-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 SHALO_0735 38e2d32d6b39dc46045c49fc7caa5371 223 Gene3D G3DSA:3.40.50.2300 1 127 1.3E-29 T 18-10-2018 SHALO_0735 38e2d32d6b39dc46045c49fc7caa5371 223 SMART SM00862 146 221 3.7E-16 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_0735 38e2d32d6b39dc46045c49fc7caa5371 223 Gene3D G3DSA:1.10.10.10 128 223 2.1E-22 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_0735 38e2d32d6b39dc46045c49fc7caa5371 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 221 3.3E-17 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_0735 38e2d32d6b39dc46045c49fc7caa5371 223 Pfam PF00072 Response regulator receiver domain 4 112 3.1E-22 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_0735 38e2d32d6b39dc46045c49fc7caa5371 223 SUPERFAMILY SSF46894 134 222 5.67E-20 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHALO_0735 38e2d32d6b39dc46045c49fc7caa5371 223 SMART SM00448 2 111 4.5E-31 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_0735 38e2d32d6b39dc46045c49fc7caa5371 223 SUPERFAMILY SSF52172 1 128 3.84E-33 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_0652 e15ea821810990dcb4c386d489b8f416 369 Gene3D G3DSA:3.40.50.1820 16 354 1.2E-118 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold SHALO_0652 e15ea821810990dcb4c386d489b8f416 369 SUPERFAMILY SSF53474 9 366 3.45E-82 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold SHALO_0652 e15ea821810990dcb4c386d489b8f416 369 Pfam PF00561 alpha/beta hydrolase fold 41 353 9.9E-25 T 18-10-2018 IPR000073 Alpha/beta hydrolase fold-1 SHALO_0652 e15ea821810990dcb4c386d489b8f416 369 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 11 365 1.1E-112 T 18-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 SHALO_0652 e15ea821810990dcb4c386d489b8f416 369 Gene3D G3DSA:1.10.1740.110 176 283 1.2E-118 T 18-10-2018 SHALO_0652 e15ea821810990dcb4c386d489b8f416 369 PIRSF PIRSF000443 2 369 2.8E-119 T 18-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 SHALO_0652 e15ea821810990dcb4c386d489b8f416 369 Hamap MF_00296 Homoserine O-acetyltransferase [metXA]. 4 366 26.065 T 18-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 SHALO_0801 c619781fe9a6251799bcb6de5060e71e 277 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 276 31.832 T 18-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 SHALO_0801 c619781fe9a6251799bcb6de5060e71e 277 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 275 1.7E-94 T 18-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 SHALO_0801 c619781fe9a6251799bcb6de5060e71e 277 Gene3D G3DSA:3.40.50.11270 12 92 3.1E-89 T 18-10-2018 SHALO_0801 c619781fe9a6251799bcb6de5060e71e 277 Gene3D G3DSA:3.40.1010.20 93 186 3.1E-89 T 18-10-2018 SHALO_0801 c619781fe9a6251799bcb6de5060e71e 277 Gene3D G3DSA:3.40.1010.20 3 272 3.1E-89 T 18-10-2018 SHALO_0801 c619781fe9a6251799bcb6de5060e71e 277 Pfam PF02401 LytB protein 3 272 3.0E-86 T 18-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 SHALO_0909 813490a99ad1a04acc1917bff5275878 220 SUPERFAMILY SSF51206 9 142 1.57E-23 T 18-10-2018 IPR018490 Cyclic nucleotide-binding-like SHALO_0909 813490a99ad1a04acc1917bff5275878 220 Gene3D G3DSA:2.60.120.10 5 146 5.3E-22 T 18-10-2018 IPR014710 RmlC-like jelly roll fold SHALO_0909 813490a99ad1a04acc1917bff5275878 220 Pfam PF00027 Cyclic nucleotide-binding domain 33 120 1.2E-8 T 18-10-2018 IPR000595 Cyclic nucleotide-binding domain SHALO_0909 813490a99ad1a04acc1917bff5275878 220 SUPERFAMILY SSF46785 155 219 1.6E-11 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SHALO_0909 813490a99ad1a04acc1917bff5275878 220 Pfam PF13545 Crp-like helix-turn-helix domain 156 218 1.4E-10 T 18-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SHALO_0909 813490a99ad1a04acc1917bff5275878 220 Gene3D G3DSA:1.10.10.10 152 218 5.9E-12 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_1611 5c97d4a24041bcfab43ccced98f15479 125 ProDom PD006096 DELTA SUBUNIT NITROGENASE DINITROGENASE OXIDOREDUCTASE VANADIUM FIXATION METAL-BINDING IRON CHAIN 17 120 3.0E-33 T 18-10-2018 IPR004349 Vanadium/alternative nitrogenase delta subunit GO:0009399|GO:0016163|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 SHALO_1611 5c97d4a24041bcfab43ccced98f15479 125 Pfam PF03139 Vanadium/alternative nitrogenase delta subunit 16 125 1.3E-49 T 18-10-2018 IPR004349 Vanadium/alternative nitrogenase delta subunit GO:0009399|GO:0016163|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 SHALO_1611 5c97d4a24041bcfab43ccced98f15479 125 TIGRFAM TIGR02929 anfG_nitrog: Fe-only nitrogenase, delta subunit 17 125 4.0E-52 T 18-10-2018 IPR014278 Nitrogenase iron-iron, delta subunit GO:0005506|GO:0009399|GO:0016163|GO:0051536|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 SHALO_1976 7dab9071bfe2e8c12722eba85b1e7f44 815 Gene3D G3DSA:2.170.16.10 204 323 2.8E-27 T 18-10-2018 SHALO_1976 7dab9071bfe2e8c12722eba85b1e7f44 815 Pfam PF05203 Hom_end-associated Hint 206 279 4.6E-20 T 18-10-2018 IPR007868 Hom-end-associated Hint GO:0030908 SHALO_1976 7dab9071bfe2e8c12722eba85b1e7f44 815 Gene3D G3DSA:1.10.860.10 1 118 2.7E-26 T 18-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal SHALO_1976 7dab9071bfe2e8c12722eba85b1e7f44 815 SUPERFAMILY SSF55608 400 489 3.16E-14 T 18-10-2018 IPR027434 Homing endonuclease SHALO_1976 7dab9071bfe2e8c12722eba85b1e7f44 815 Pfam PF05204 Homing endonuclease 403 483 4.6E-6 T 18-10-2018 IPR007869 Homing endonuclease PI-Sce GO:0003677|GO:0004519|GO:0030908 SHALO_1976 7dab9071bfe2e8c12722eba85b1e7f44 815 Pfam PF03796 DnaB-like helicase C terminal domain 512 786 2.0E-82 T 18-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 SHALO_1976 7dab9071bfe2e8c12722eba85b1e7f44 815 Gene3D G3DSA:3.40.50.300 149 203 5.9E-8 T 18-10-2018 SHALO_1976 7dab9071bfe2e8c12722eba85b1e7f44 815 Gene3D G3DSA:3.40.50.300 502 787 3.8E-85 T 18-10-2018 SHALO_1976 7dab9071bfe2e8c12722eba85b1e7f44 815 SUPERFAMILY SSF48024 4 107 1.23E-20 T 18-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 SHALO_1976 7dab9071bfe2e8c12722eba85b1e7f44 815 Gene3D G3DSA:3.10.28.10 324 491 4.9E-17 T 18-10-2018 IPR027434 Homing endonuclease SHALO_1976 7dab9071bfe2e8c12722eba85b1e7f44 815 Pfam PF00772 DnaB-like helicase N terminal domain 4 99 1.8E-21 T 18-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 SHALO_1976 7dab9071bfe2e8c12722eba85b1e7f44 815 SUPERFAMILY SSF52540 545 778 4.09E-35 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_1976 7dab9071bfe2e8c12722eba85b1e7f44 815 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 4 787 6.3E-138 T 18-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 SHALO_1976 7dab9071bfe2e8c12722eba85b1e7f44 815 SUPERFAMILY SSF51294 205 547 3.14E-35 T 18-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 SHALO_1976 7dab9071bfe2e8c12722eba85b1e7f44 815 Pfam PF03796 DnaB-like helicase C terminal domain 174 206 2.8E-8 T 18-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 SHALO_2014 f8caf978cf841ce4f3545ef5c9a9060f 681 Pfam PF13361 UvrD-like helicase C-terminal domain 269 598 2.8E-71 T 18-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 SHALO_2014 f8caf978cf841ce4f3545ef5c9a9060f 681 Gene3D G3DSA:3.40.50.300 7 264 1.1E-87 T 18-10-2018 SHALO_2014 f8caf978cf841ce4f3545ef5c9a9060f 681 SUPERFAMILY SSF52540 6 618 4.47E-153 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_2014 f8caf978cf841ce4f3545ef5c9a9060f 681 Gene3D G3DSA:1.10.486.10 374 536 5.8E-105 T 18-10-2018 SHALO_2014 f8caf978cf841ce4f3545ef5c9a9060f 681 Gene3D G3DSA:1.10.10.160 107 181 1.1E-87 T 18-10-2018 IPR013986 DExx box DNA helicase domain superfamily SHALO_2014 f8caf978cf841ce4f3545ef5c9a9060f 681 Gene3D G3DSA:3.40.50.300 272 616 5.8E-105 T 18-10-2018 SHALO_2014 f8caf978cf841ce4f3545ef5c9a9060f 681 Pfam PF00580 UvrD/REP helicase N-terminal domain 124 264 2.2E-41 T 18-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 SHALO_2014 f8caf978cf841ce4f3545ef5c9a9060f 681 Pfam PF00580 UvrD/REP helicase N-terminal domain 7 116 5.3E-26 T 18-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 SHALO_1143 453bb56fcc4cc4c3e6bd9155dd2ef4b0 294 SMART SM00962 85 286 1.4E-103 T 18-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 SHALO_1143 453bb56fcc4cc4c3e6bd9155dd2ef4b0 294 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 32 284 3.3E-93 T 18-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 SHALO_1143 453bb56fcc4cc4c3e6bd9155dd2ef4b0 294 SUPERFAMILY SSF52540 83 285 5.2E-48 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_1143 453bb56fcc4cc4c3e6bd9155dd2ef4b0 294 Gene3D G3DSA:1.20.120.140 3 283 2.1E-92 T 18-10-2018 SHALO_1143 453bb56fcc4cc4c3e6bd9155dd2ef4b0 294 SMART SM00382 84 267 1.4E-4 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_1143 453bb56fcc4cc4c3e6bd9155dd2ef4b0 294 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 23 286 53.79 T 18-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 SHALO_1143 453bb56fcc4cc4c3e6bd9155dd2ef4b0 294 Gene3D G3DSA:3.40.50.300 85 274 2.1E-92 T 18-10-2018 SHALO_1143 453bb56fcc4cc4c3e6bd9155dd2ef4b0 294 Pfam PF00448 SRP54-type protein, GTPase domain 86 285 2.7E-73 T 18-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 SHALO_2315 b7b976a017bb96ed0f03a35edcd8ef4e 197 SUPERFAMILY SSF54001 21 136 1.2E-20 T 18-10-2018 IPR038765 Papain-like cysteine peptidase superfamily SHALO_2315 b7b976a017bb96ed0f03a35edcd8ef4e 197 Pfam PF01841 Transglutaminase-like superfamily 26 132 1.3E-13 T 18-10-2018 IPR002931 Transglutaminase-like SHALO_2315 b7b976a017bb96ed0f03a35edcd8ef4e 197 Gene3D G3DSA:3.10.620.30 2 144 9.8E-15 T 18-10-2018 SHALO_0053 ce17a963ed19708edadd87b4eac1847f 365 Gene3D G3DSA:1.10.150.130 75 187 6.9E-11 T 18-10-2018 IPR010998 Integrase/recombinase, N-terminal SHALO_0053 ce17a963ed19708edadd87b4eac1847f 365 Gene3D G3DSA:1.10.443.10 188 362 5.3E-32 T 18-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 SHALO_0053 ce17a963ed19708edadd87b4eac1847f 365 Pfam PF00589 Phage integrase family 190 352 1.8E-22 T 18-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SHALO_0053 ce17a963ed19708edadd87b4eac1847f 365 SUPERFAMILY SSF56349 83 359 1.18E-46 T 18-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SHALO_2591 98b8f55259d413be639d340e128f37fe 423 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 290 311 9.1E-39 T 18-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SHALO_2591 98b8f55259d413be639d340e128f37fe 423 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 323 347 9.1E-39 T 18-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SHALO_2591 98b8f55259d413be639d340e128f37fe 423 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 21 44 9.1E-39 T 18-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SHALO_2591 98b8f55259d413be639d340e128f37fe 423 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 387 402 9.1E-39 T 18-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SHALO_2591 98b8f55259d413be639d340e128f37fe 423 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 63 83 9.1E-39 T 18-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SHALO_2591 98b8f55259d413be639d340e128f37fe 423 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 402 422 9.1E-39 T 18-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SHALO_2591 98b8f55259d413be639d340e128f37fe 423 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 347 370 9.1E-39 T 18-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SHALO_2591 98b8f55259d413be639d340e128f37fe 423 Pfam PF13437 HlyD family secretion protein 278 378 5.2E-14 T 18-10-2018 SHALO_2591 98b8f55259d413be639d340e128f37fe 423 Gene3D G3DSA:2.40.50.100 278 314 1.1E-13 T 18-10-2018 SHALO_2591 98b8f55259d413be639d340e128f37fe 423 Gene3D G3DSA:2.40.30.170 315 400 1.1E-13 T 18-10-2018 SHALO_2591 98b8f55259d413be639d340e128f37fe 423 Gene3D G3DSA:1.10.287.470 153 274 1.1E-13 T 18-10-2018 SHALO_2591 98b8f55259d413be639d340e128f37fe 423 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 15 422 2.7E-100 T 18-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 SHALO_2710 17e87e062853293d76152c2a9cd8dc90 104 SUPERFAMILY SSF54637 16 81 2.98E-5 T 18-10-2018 IPR029069 HotDog domain superfamily SHALO_2710 17e87e062853293d76152c2a9cd8dc90 104 Gene3D G3DSA:3.10.129.10 7 102 1.7E-5 T 18-10-2018 SHALO_0237 03e6a73ef3731a807a3cebf19c160d2b 94 Gene3D G3DSA:3.10.450.530 1 90 7.0E-15 T 18-10-2018 IPR038573 Ribonuclease toxin BrnT superfamily SHALO_0237 03e6a73ef3731a807a3cebf19c160d2b 94 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 5 87 2.8E-23 T 18-10-2018 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system SHALO_0130 7282f1b48286047b4eb3a55a5de29f6e 70 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 17.668 T 18-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_0130 7282f1b48286047b4eb3a55a5de29f6e 70 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 3.2E-19 T 18-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_0130 7282f1b48286047b4eb3a55a5de29f6e 70 Gene3D G3DSA:1.20.5.1150 16 56 3.0E-7 T 18-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_0130 7282f1b48286047b4eb3a55a5de29f6e 70 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 43 1.0E-7 T 18-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_0130 7282f1b48286047b4eb3a55a5de29f6e 70 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 3.6E-8 T 18-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_0130 7282f1b48286047b4eb3a55a5de29f6e 70 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 3.6E-8 T 18-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_0130 7282f1b48286047b4eb3a55a5de29f6e 70 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 3.6E-8 T 18-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_0130 7282f1b48286047b4eb3a55a5de29f6e 70 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 3.6E-8 T 18-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_0130 7282f1b48286047b4eb3a55a5de29f6e 70 Pfam PF01165 Ribosomal protein S21 4 56 2.2E-15 T 18-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_1917 3fa6cbf2dff88055e4afe2ca65001ae8 536 Pfam PF12729 Four helix bundle sensory module for signal transduction 1 174 2.7E-14 T 18-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain SHALO_1917 3fa6cbf2dff88055e4afe2ca65001ae8 536 SMART SM00283 274 535 2.6E-44 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_1917 3fa6cbf2dff88055e4afe2ca65001ae8 536 SUPERFAMILY SSF58104 228 535 8.02E-58 T 18-10-2018 SHALO_1917 3fa6cbf2dff88055e4afe2ca65001ae8 536 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 350 459 5.5E-33 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_1917 3fa6cbf2dff88055e4afe2ca65001ae8 536 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 372 399 9.0E-22 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 SHALO_1917 3fa6cbf2dff88055e4afe2ca65001ae8 536 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 1 26 9.0E-22 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 SHALO_1917 3fa6cbf2dff88055e4afe2ca65001ae8 536 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 401 430 9.0E-22 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 SHALO_1917 3fa6cbf2dff88055e4afe2ca65001ae8 536 Gene3D G3DSA:1.10.287.950 206 536 1.9E-58 T 18-10-2018 SHALO_2859 140ffda07bd46fd8534c362305650976 406 Gene3D G3DSA:3.40.640.10 1 272 1.9E-74 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 SHALO_2859 140ffda07bd46fd8534c362305650976 406 PIRSF PIRSF001434 1 406 5.4E-112 T 18-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 SHALO_2859 140ffda07bd46fd8534c362305650976 406 SUPERFAMILY SSF53383 1 406 7.26E-95 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase SHALO_2859 140ffda07bd46fd8534c362305650976 406 Gene3D G3DSA:3.90.1150.10 276 406 1.4E-37 T 18-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 SHALO_2859 140ffda07bd46fd8534c362305650976 406 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 5 405 7.2E-105 T 18-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 SHALO_0878 e144c0cc641badd34be88a13db564739 645 Hamap MF_01228 Methionine--tRNA ligase [metG]. 1 506 46.468 T 18-10-2018 IPR023457 Methionine-tRNA synthetase, type 2 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 SHALO_0878 e144c0cc641badd34be88a13db564739 645 Gene3D G3DSA:2.170.220.10 116 228 1.6E-149 T 18-10-2018 SHALO_0878 e144c0cc641badd34be88a13db564739 645 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 14 136 2.5E-6 T 18-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 SHALO_0878 e144c0cc641badd34be88a13db564739 645 Gene3D G3DSA:2.40.50.140 534 644 1.7E-31 T 18-10-2018 SHALO_0878 e144c0cc641badd34be88a13db564739 645 SUPERFAMILY SSF52374 3 348 9.38E-110 T 18-10-2018 SHALO_0878 e144c0cc641badd34be88a13db564739 645 Pfam PF09334 tRNA synthetases class I (M) 143 361 2.4E-66 T 18-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_0878 e144c0cc641badd34be88a13db564739 645 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 6 507 6.0E-160 T 18-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 SHALO_0878 e144c0cc641badd34be88a13db564739 645 Pfam PF01588 Putative tRNA binding domain 550 641 9.3E-26 T 18-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 SHALO_0878 e144c0cc641badd34be88a13db564739 645 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 525 644 7.1E-36 T 18-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 SHALO_0878 e144c0cc641badd34be88a13db564739 645 PRINTS PR01041 Methionyl-tRNA synthetase signature 7 20 7.1E-36 T 18-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 SHALO_0878 e144c0cc641badd34be88a13db564739 645 PRINTS PR01041 Methionyl-tRNA synthetase signature 349 360 7.1E-36 T 18-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 SHALO_0878 e144c0cc641badd34be88a13db564739 645 PRINTS PR01041 Methionyl-tRNA synthetase signature 39 53 7.1E-36 T 18-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 SHALO_0878 e144c0cc641badd34be88a13db564739 645 PRINTS PR01041 Methionyl-tRNA synthetase signature 226 237 7.1E-36 T 18-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 SHALO_0878 e144c0cc641badd34be88a13db564739 645 PRINTS PR01041 Methionyl-tRNA synthetase signature 257 272 7.1E-36 T 18-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 SHALO_0878 e144c0cc641badd34be88a13db564739 645 PRINTS PR01041 Methionyl-tRNA synthetase signature 87 98 7.1E-36 T 18-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 SHALO_0878 e144c0cc641badd34be88a13db564739 645 SUPERFAMILY SSF47323 354 516 3.18E-30 T 18-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_0878 e144c0cc641badd34be88a13db564739 645 Gene3D G3DSA:3.40.50.620 6 334 1.6E-149 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_0878 e144c0cc641badd34be88a13db564739 645 SUPERFAMILY SSF50249 544 644 7.59E-30 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold SHALO_0878 e144c0cc641badd34be88a13db564739 645 Gene3D G3DSA:1.10.730.10 338 509 1.6E-34 T 18-10-2018 SHALO_2021 f5e893475954b4fbcee146ea753d2ac8 173 Pfam PF05433 Glycine zipper 2TM domain 69 108 3.6E-8 T 18-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 SHALO_0663 733f6989b6ac0351ac08e233a16008b7 229 SUPERFAMILY SSF53335 13 201 2.61E-26 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_0663 733f6989b6ac0351ac08e233a16008b7 229 Gene3D G3DSA:2.20.25.110 135 193 1.0E-27 T 18-10-2018 SHALO_0663 733f6989b6ac0351ac08e233a16008b7 229 Pfam PF13649 Methyltransferase domain 40 127 1.1E-13 T 18-10-2018 SHALO_0663 733f6989b6ac0351ac08e233a16008b7 229 Gene3D G3DSA:3.40.50.150 17 201 1.0E-27 T 18-10-2018 SHALO_0962 a2b4eac65b1623a806583c57ea4d78ba 319 Gene3D G3DSA:2.60.120.1440 106 242 7.8E-23 T 18-10-2018 SHALO_0962 a2b4eac65b1623a806583c57ea4d78ba 319 Pfam PF04773 FecR protein 118 205 4.8E-17 T 18-10-2018 IPR006860 FecR protein SHALO_0962 a2b4eac65b1623a806583c57ea4d78ba 319 Gene3D G3DSA:3.55.50.30 243 307 8.1E-6 T 18-10-2018 SHALO_0962 a2b4eac65b1623a806583c57ea4d78ba 319 PIRSF PIRSF018266 1 319 1.8E-62 T 18-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component SHALO_0962 a2b4eac65b1623a806583c57ea4d78ba 319 Pfam PF16344 Domain of unknown function (DUF4974) 220 316 1.2E-9 T 18-10-2018 IPR032508 Protein FecR, C-terminal SHALO_1641 a49f0fabb5665c0e2b810a6c9be6d5f0 166 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 102 1.3E-11 T 18-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 SHALO_1641 a49f0fabb5665c0e2b810a6c9be6d5f0 166 SMART SM00855 3 117 7.0E-6 T 18-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 SHALO_1641 a49f0fabb5665c0e2b810a6c9be6d5f0 166 Gene3D G3DSA:3.40.50.1240 1 163 3.1E-36 T 18-10-2018 IPR029033 Histidine phosphatase superfamily SHALO_1641 a49f0fabb5665c0e2b810a6c9be6d5f0 166 SUPERFAMILY SSF53254 1 161 6.0E-28 T 18-10-2018 IPR029033 Histidine phosphatase superfamily SHALO_1489 f05bb81cb24813dd13e73155f1fadd75 212 SUPERFAMILY SSF48695 11 174 7.92E-24 T 18-10-2018 IPR036280 Multiheme cytochrome superfamily SHALO_1489 f05bb81cb24813dd13e73155f1fadd75 212 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 10 175 5.3E-38 T 18-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal SHALO_1489 f05bb81cb24813dd13e73155f1fadd75 212 PIRSF PIRSF000013 3 187 4.1E-19 T 18-10-2018 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 SHALO_1489 f05bb81cb24813dd13e73155f1fadd75 212 Gene3D G3DSA:1.10.3820.10 6 183 3.5E-35 T 18-10-2018 IPR038266 NapC/NirT cytochrome c superfamily SHALO_1243 10a01d58257c7081f77ca9a45d8f8875 305 PRINTS PR00412 Epoxide hydrolase signature 107 120 2.3E-9 T 18-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 SHALO_1243 10a01d58257c7081f77ca9a45d8f8875 305 PRINTS PR00412 Epoxide hydrolase signature 275 297 2.3E-9 T 18-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 SHALO_1243 10a01d58257c7081f77ca9a45d8f8875 305 PRINTS PR00412 Epoxide hydrolase signature 39 57 2.3E-9 T 18-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 SHALO_1243 10a01d58257c7081f77ca9a45d8f8875 305 Gene3D G3DSA:3.40.50.1820 1 300 3.4E-77 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold SHALO_1243 10a01d58257c7081f77ca9a45d8f8875 305 Pfam PF00561 alpha/beta hydrolase fold 34 287 1.2E-23 T 18-10-2018 IPR000073 Alpha/beta hydrolase fold-1 SHALO_1243 10a01d58257c7081f77ca9a45d8f8875 305 SUPERFAMILY SSF53474 5 300 2.92E-70 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold SHALO_1196 d603b9919d7b92f5af6d2db7d31acbd8 222 Gene3D G3DSA:3.40.50.2300 2 127 8.7E-31 T 18-10-2018 SHALO_1196 d603b9919d7b92f5af6d2db7d31acbd8 222 SMART SM00862 147 220 1.4E-15 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_1196 d603b9919d7b92f5af6d2db7d31acbd8 222 Pfam PF00072 Response regulator receiver domain 7 112 2.0E-21 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_1196 d603b9919d7b92f5af6d2db7d31acbd8 222 SUPERFAMILY SSF52172 3 168 5.69E-33 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_1196 d603b9919d7b92f5af6d2db7d31acbd8 222 Gene3D G3DSA:1.10.10.10 128 222 2.3E-23 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_1196 d603b9919d7b92f5af6d2db7d31acbd8 222 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 220 2.5E-17 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_1196 d603b9919d7b92f5af6d2db7d31acbd8 222 SMART SM00448 5 115 3.6E-28 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_0590 943e7497e2c806882fb10679fd5ddce4 248 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 11 228 1.7E-15 T 18-10-2018 SHALO_2422 1e5e1857875e3352c37d6269a995b4d0 105 SUPERFAMILY SSF56047 2 105 9.16E-32 T 18-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_2422 1e5e1857875e3352c37d6269a995b4d0 105 ProSitePatterns PS00053 Ribosomal protein S8 signature. 75 92 - T 18-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_2422 1e5e1857875e3352c37d6269a995b4d0 105 Gene3D G3DSA:3.30.1490.10 52 105 3.4E-23 T 18-10-2018 SHALO_2422 1e5e1857875e3352c37d6269a995b4d0 105 Pfam PF00410 Ribosomal protein S8 2 105 2.0E-35 T 18-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_2422 1e5e1857875e3352c37d6269a995b4d0 105 Gene3D G3DSA:3.30.1370.30 1 51 5.0E-10 T 18-10-2018 SHALO_2419 9f7b62bac2ae216f2a9c5b1978909892 147 SUPERFAMILY SSF54211 77 146 8.09E-23 T 18-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold SHALO_2419 9f7b62bac2ae216f2a9c5b1978909892 147 Pfam PF00333 Ribosomal protein S5, N-terminal domain 9 73 7.8E-29 T 18-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 SHALO_2419 9f7b62bac2ae216f2a9c5b1978909892 147 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 147 31.35 T 18-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 SHALO_2419 9f7b62bac2ae216f2a9c5b1978909892 147 ProSitePatterns PS00585 Ribosomal protein S5 signature. 26 58 - T 18-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site SHALO_2419 9f7b62bac2ae216f2a9c5b1978909892 147 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 7 146 3.7E-64 T 18-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 SHALO_2419 9f7b62bac2ae216f2a9c5b1978909892 147 Pfam PF03719 Ribosomal protein S5, C-terminal domain 85 147 1.0E-25 T 18-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 SHALO_2419 9f7b62bac2ae216f2a9c5b1978909892 147 SUPERFAMILY SSF54768 5 74 5.55E-24 T 18-10-2018 SHALO_2419 9f7b62bac2ae216f2a9c5b1978909892 147 Gene3D G3DSA:3.30.230.10 72 147 4.2E-31 T 18-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SHALO_2419 9f7b62bac2ae216f2a9c5b1978909892 147 Gene3D G3DSA:3.30.160.20 1 71 1.5E-30 T 18-10-2018 SHALO_0125 3ad2cf666be0a0510226c1c540ec407f 171 SUPERFAMILY SSF55200 84 171 7.72E-27 T 18-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 SHALO_0125 3ad2cf666be0a0510226c1c540ec407f 171 Gene3D G3DSA:3.10.20.80 3 80 8.5E-33 T 18-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 SHALO_0125 3ad2cf666be0a0510226c1c540ec407f 171 ProSitePatterns PS00938 Initiation factor 3 signature. 60 73 - T 18-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 SHALO_0125 3ad2cf666be0a0510226c1c540ec407f 171 SUPERFAMILY SSF54364 7 80 4.32E-29 T 18-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 SHALO_0125 3ad2cf666be0a0510226c1c540ec407f 171 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 85 170 6.9E-30 T 18-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 SHALO_0125 3ad2cf666be0a0510226c1c540ec407f 171 Gene3D G3DSA:3.30.110.10 81 171 3.3E-32 T 18-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 SHALO_0125 3ad2cf666be0a0510226c1c540ec407f 171 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 9 171 6.6E-66 T 18-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 SHALO_0125 3ad2cf666be0a0510226c1c540ec407f 171 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 9 78 1.1E-30 T 18-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 SHALO_0125 3ad2cf666be0a0510226c1c540ec407f 171 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 3 171 27.472 T 18-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 SHALO_1645 9e2b02bd086e8af550070dddffbfe1b6 467 SUPERFAMILY SSF116726 146 213 1.02E-7 T 18-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 SHALO_1645 9e2b02bd086e8af550070dddffbfe1b6 467 Pfam PF02080 TrkA-C domain 147 212 4.3E-7 T 18-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SHALO_1645 9e2b02bd086e8af550070dddffbfe1b6 467 Gene3D G3DSA:3.30.70.1450 137 217 6.5E-8 T 18-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 SHALO_2179 649ad38d9ec8eed112c17ba7655d3cfc 227 SUPERFAMILY SSF81901 28 86 4.58E-13 T 18-10-2018 SHALO_2179 649ad38d9ec8eed112c17ba7655d3cfc 227 SMART SM00671 143 174 0.25 T 18-10-2018 IPR006597 Sel1-like repeat SHALO_2179 649ad38d9ec8eed112c17ba7655d3cfc 227 SMART SM00671 175 210 4.3E-6 T 18-10-2018 IPR006597 Sel1-like repeat SHALO_2179 649ad38d9ec8eed112c17ba7655d3cfc 227 SMART SM00671 72 106 1.7E-4 T 18-10-2018 IPR006597 Sel1-like repeat SHALO_2179 649ad38d9ec8eed112c17ba7655d3cfc 227 SMART SM00671 107 142 5.4E-8 T 18-10-2018 IPR006597 Sel1-like repeat SHALO_2179 649ad38d9ec8eed112c17ba7655d3cfc 227 SMART SM00671 36 71 1.4E-7 T 18-10-2018 IPR006597 Sel1-like repeat SHALO_2179 649ad38d9ec8eed112c17ba7655d3cfc 227 SUPERFAMILY SSF81901 90 218 1.02E-29 T 18-10-2018 SHALO_2179 649ad38d9ec8eed112c17ba7655d3cfc 227 Gene3D G3DSA:1.25.40.10 22 227 4.7E-51 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SHALO_2179 649ad38d9ec8eed112c17ba7655d3cfc 227 Pfam PF08238 Sel1 repeat 75 102 0.0014 T 18-10-2018 IPR006597 Sel1-like repeat SHALO_2179 649ad38d9ec8eed112c17ba7655d3cfc 227 Pfam PF08238 Sel1 repeat 145 173 170.0 T 18-10-2018 IPR006597 Sel1-like repeat SHALO_2179 649ad38d9ec8eed112c17ba7655d3cfc 227 Pfam PF08238 Sel1 repeat 37 71 1.7E-5 T 18-10-2018 IPR006597 Sel1-like repeat SHALO_2179 649ad38d9ec8eed112c17ba7655d3cfc 227 Pfam PF08238 Sel1 repeat 112 142 2.3E-5 T 18-10-2018 IPR006597 Sel1-like repeat SHALO_2179 649ad38d9ec8eed112c17ba7655d3cfc 227 Pfam PF08238 Sel1 repeat 181 210 6.5E-5 T 18-10-2018 IPR006597 Sel1-like repeat SHALO_2688 5cd299a6000ae65796db3bf431311d09 387 SUPERFAMILY SSF53822 33 382 4.04E-64 T 18-10-2018 IPR028082 Periplasmic binding protein-like I SHALO_2688 5cd299a6000ae65796db3bf431311d09 387 Pfam PF13458 Periplasmic binding protein 34 367 4.8E-53 T 18-10-2018 IPR028081 Leucine-binding protein domain SHALO_2688 5cd299a6000ae65796db3bf431311d09 387 Gene3D G3DSA:3.40.50.2300 42 349 3.1E-88 T 18-10-2018 SHALO_2688 5cd299a6000ae65796db3bf431311d09 387 Gene3D G3DSA:3.40.50.2300 154 284 3.1E-88 T 18-10-2018 SHALO_2496 cf0aca3163eb286e7863388ddecb4b87 350 Gene3D G3DSA:3.40.630.30 2 156 1.1E-10 T 18-10-2018 SHALO_2496 cf0aca3163eb286e7863388ddecb4b87 350 SUPERFAMILY SSF55729 17 141 3.47E-7 T 18-10-2018 IPR016181 Acyl-CoA N-acyltransferase SHALO_3000 98dd43a07ed08e88e2ed176844dda9f8 187 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 96 107 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_3000 98dd43a07ed08e88e2ed176844dda9f8 187 SUPERFAMILY SSF54862 1 186 6.59E-57 T 18-10-2018 SHALO_3000 98dd43a07ed08e88e2ed176844dda9f8 187 Pfam PF13247 4Fe-4S dicluster domain 58 153 2.0E-20 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_3000 98dd43a07ed08e88e2ed176844dda9f8 187 Gene3D G3DSA:3.30.70.20 4 186 5.1E-55 T 18-10-2018 SHALO_3000 98dd43a07ed08e88e2ed176844dda9f8 187 Gene3D G3DSA:3.30.70.20 70 122 5.1E-55 T 18-10-2018 SHALO_0495 f9944eb6aa5fa1409d3bd90b0dd59da0 228 SUPERFAMILY SSF52172 9 172 2.28E-33 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_0495 f9944eb6aa5fa1409d3bd90b0dd59da0 228 SMART SM00448 11 122 1.9E-27 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_0495 f9944eb6aa5fa1409d3bd90b0dd59da0 228 Pfam PF00072 Response regulator receiver domain 14 122 9.8E-26 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_0495 f9944eb6aa5fa1409d3bd90b0dd59da0 228 SUPERFAMILY SSF46894 146 226 3.06E-13 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHALO_0495 f9944eb6aa5fa1409d3bd90b0dd59da0 228 Gene3D G3DSA:1.10.10.10 135 228 3.7E-19 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_0495 f9944eb6aa5fa1409d3bd90b0dd59da0 228 Gene3D G3DSA:3.40.50.2300 5 127 8.3E-31 T 18-10-2018 SHALO_0495 f9944eb6aa5fa1409d3bd90b0dd59da0 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 226 1.5E-13 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_0495 f9944eb6aa5fa1409d3bd90b0dd59da0 228 SMART SM00862 156 226 9.0E-12 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_1808 1e6844548decba03bb7db5420131d84b 160 SUPERFAMILY SSF54637 6 150 1.8E-43 T 18-10-2018 IPR029069 HotDog domain superfamily SHALO_1808 1e6844548decba03bb7db5420131d84b 160 Gene3D G3DSA:3.10.129.10 3 156 5.7E-56 T 18-10-2018 SHALO_1808 1e6844548decba03bb7db5420131d84b 160 Pfam PF03061 Thioesterase superfamily 26 99 3.7E-13 T 18-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 SHALO_2675 4d602336660106db57cf8fe74afad5a8 69 SUPERFAMILY SSF50331 1 68 3.16E-14 T 18-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal SHALO_2675 4d602336660106db57cf8fe74afad5a8 69 Pfam PF03459 TOBE domain 5 65 1.7E-9 T 18-10-2018 IPR005116 Transport-associated OB, type 1 SHALO_2675 4d602336660106db57cf8fe74afad5a8 69 Gene3D G3DSA:2.40.50.100 1 67 1.3E-17 T 18-10-2018 SHALO_1438 e4d06e153f6dfab09a9e5905d41d37fc 180 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2 176 2.0E-48 T 18-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 SHALO_1438 e4d06e153f6dfab09a9e5905d41d37fc 180 Gene3D G3DSA:1.20.120.1760 5 176 1.4E-12 T 18-10-2018 SHALO_1438 e4d06e153f6dfab09a9e5905d41d37fc 180 PIRSF PIRSF000847 1 179 1.6E-47 T 18-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 SHALO_1438 e4d06e153f6dfab09a9e5905d41d37fc 180 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 57 79 - T 18-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 SHALO_1438 e4d06e153f6dfab09a9e5905d41d37fc 180 Pfam PF01066 CDP-alcohol phosphatidyltransferase 3 79 1.1E-14 T 18-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 SHALO_1237 f222293f4992504bb1940ef9c9b74405 94 PIRSF PIRSF006156 6 94 1.5E-19 T 18-10-2018 IPR004386 Toxin-antitoxin system, YafQ-like toxin SHALO_1237 f222293f4992504bb1940ef9c9b74405 94 SUPERFAMILY SSF143011 8 93 1.39E-22 T 18-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily SHALO_1237 f222293f4992504bb1940ef9c9b74405 94 Pfam PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ 8 93 4.0E-27 T 18-10-2018 IPR004386 Toxin-antitoxin system, YafQ-like toxin SHALO_1237 f222293f4992504bb1940ef9c9b74405 94 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 9 93 1.3E-19 T 18-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family SHALO_1237 f222293f4992504bb1940ef9c9b74405 94 Gene3D G3DSA:3.30.2310.20 3 93 2.1E-27 T 18-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily SHALO_1675 99024eeb0fde582f11be5ad19b0e06f5 602 SUPERFAMILY SSF143968 318 447 2.35E-38 T 18-10-2018 SHALO_1675 99024eeb0fde582f11be5ad19b0e06f5 602 SUPERFAMILY SSF143968 467 586 5.62E-10 T 18-10-2018 SHALO_1675 99024eeb0fde582f11be5ad19b0e06f5 602 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 468 548 8.9E-5 T 18-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 SHALO_1675 99024eeb0fde582f11be5ad19b0e06f5 602 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 5 417 7.1E-124 T 18-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 SHALO_1675 99024eeb0fde582f11be5ad19b0e06f5 602 Gene3D G3DSA:3.40.1670.10 332 446 3.9E-25 T 18-10-2018 SHALO_1675 99024eeb0fde582f11be5ad19b0e06f5 602 TIGRFAM TIGR03701 mena_SCO4490: menaquinone biosynthesis decarboxylase, SCO4490 family 4 440 9.8E-190 T 18-10-2018 IPR022390 4-hydroxybenzoate decarboxylase subunit C GO:0016831 SHALO_1675 99024eeb0fde582f11be5ad19b0e06f5 602 SUPERFAMILY SSF50475 1 317 4.71E-97 T 18-10-2018 SHALO_1675 99024eeb0fde582f11be5ad19b0e06f5 602 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 1 446 5.8E-132 T 18-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 SHALO_1495 38c03dd008dea537feeea7699014268f 501 SUPERFAMILY SSF54862 355 430 1.05E-9 T 18-10-2018 SHALO_1495 38c03dd008dea537feeea7699014268f 501 Gene3D G3DSA:3.30.70.20 360 431 3.3E-8 T 18-10-2018 SHALO_1495 38c03dd008dea537feeea7699014268f 501 Pfam PF13486 Reductive dehalogenase subunit 65 352 2.5E-32 T 18-10-2018 IPR028894 Reductive dehalogenase domain SHALO_1495 38c03dd008dea537feeea7699014268f 501 TIGRFAM TIGR02486 RDH: reductive dehalogenase 177 464 4.3E-96 T 18-10-2018 IPR012832 Reductive dehalogenase SHALO_1495 38c03dd008dea537feeea7699014268f 501 Pfam PF13484 4Fe-4S double cluster binding domain 365 429 1.2E-9 T 18-10-2018 SHALO_1495 38c03dd008dea537feeea7699014268f 501 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 366 377 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_1844 b755ad29180f312db45586dbda19831b 121 Gene3D G3DSA:2.170.150.20 2 121 8.0E-47 T 18-10-2018 SHALO_1844 b755ad29180f312db45586dbda19831b 121 SUPERFAMILY SSF51316 4 120 4.92E-47 T 18-10-2018 IPR011057 Mss4-like superfamily SHALO_1844 b755ad29180f312db45586dbda19831b 121 Pfam PF01641 SelR domain 5 118 1.5E-43 T 18-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 SHALO_1844 b755ad29180f312db45586dbda19831b 121 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 5 120 1.0E-35 T 18-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 SHALO_0420 7c0c01162d42424b08998179025118e7 700 ProSitePatterns PS00211 ABC transporters family signature. 599 613 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_0420 7c0c01162d42424b08998179025118e7 700 Pfam PF03412 Peptidase C39 family 4 120 6.3E-8 T 18-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 SHALO_0420 7c0c01162d42424b08998179025118e7 700 SUPERFAMILY SSF52540 449 697 1.15E-90 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0420 7c0c01162d42424b08998179025118e7 700 Pfam PF00664 ABC transporter transmembrane region 149 416 3.1E-53 T 18-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 SHALO_0420 7c0c01162d42424b08998179025118e7 700 Gene3D G3DSA:3.40.50.300 452 700 3.3E-91 T 18-10-2018 SHALO_0420 7c0c01162d42424b08998179025118e7 700 SMART SM00382 487 673 1.2E-18 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_0420 7c0c01162d42424b08998179025118e7 700 SUPERFAMILY SSF90123 134 445 8.76E-69 T 18-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 SHALO_0420 7c0c01162d42424b08998179025118e7 700 Gene3D G3DSA:3.90.70.10 3 129 3.5E-16 T 18-10-2018 SHALO_0420 7c0c01162d42424b08998179025118e7 700 Pfam PF00005 ABC transporter 478 627 2.3E-34 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_0420 7c0c01162d42424b08998179025118e7 700 TIGRFAM TIGR01846 type_I_sec_HlyB: type I secretion system ATPase 5 697 3.3E-263 T 18-10-2018 IPR010132 ATPase, type I secretion system, HlyB GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 SHALO_0420 7c0c01162d42424b08998179025118e7 700 Gene3D G3DSA:1.20.1560.10 133 447 5.7E-78 T 18-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 SHALO_2653 f62a03d20d975a07f8d8fa1f1c5b6842 245 Gene3D G3DSA:1.10.10.10 121 245 3.3E-30 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_2653 f62a03d20d975a07f8d8fa1f1c5b6842 245 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 149 208 2.0E-7 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SHALO_2653 f62a03d20d975a07f8d8fa1f1c5b6842 245 SUPERFAMILY SSF46785 130 234 4.97E-19 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SHALO_2224 58c49e0e5315f5fba9865151f16649f7 292 SUPERFAMILY SSF51735 1 150 1.29E-22 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_2224 58c49e0e5315f5fba9865151f16649f7 292 Pfam PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation 125 262 2.4E-51 T 18-10-2018 IPR015426 Acetaldehyde dehydrogenase, C-terminal GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 SHALO_2224 58c49e0e5315f5fba9865151f16649f7 292 Hamap MF_01657 Acetaldehyde dehydrogenase [mhpF]. 1 292 90.724 T 18-10-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 SHALO_2224 58c49e0e5315f5fba9865151f16649f7 292 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 99 3.4E-10 T 18-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 SHALO_2224 58c49e0e5315f5fba9865151f16649f7 292 SMART SM00859 4 117 2.7E-4 T 18-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 SHALO_2224 58c49e0e5315f5fba9865151f16649f7 292 TIGRFAM TIGR03215 ac_ald_DH_ac: acetaldehyde dehydrogenase (acetylating) 2 286 7.7E-116 T 18-10-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 SHALO_2224 58c49e0e5315f5fba9865151f16649f7 292 PIRSF PIRSF015689 1 292 1.5E-118 T 18-10-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 SHALO_2224 58c49e0e5315f5fba9865151f16649f7 292 SUPERFAMILY SSF55347 125 263 3.53E-47 T 18-10-2018 SHALO_2224 58c49e0e5315f5fba9865151f16649f7 292 Gene3D G3DSA:3.40.50.720 4 281 4.9E-115 T 18-10-2018 SHALO_2224 58c49e0e5315f5fba9865151f16649f7 292 Gene3D G3DSA:3.30.360.10 125 262 4.9E-115 T 18-10-2018 SHALO_2121 344bda1f95c7190fb9fab358362868f5 413 Gene3D G3DSA:1.10.3210.10 200 383 1.1E-12 T 18-10-2018 SHALO_2121 344bda1f95c7190fb9fab358362868f5 413 PIRSF PIRSF003180 1 410 1.9E-102 T 18-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing SHALO_2121 344bda1f95c7190fb9fab358362868f5 413 Pfam PF00563 EAL domain 61 195 1.7E-13 T 18-10-2018 IPR001633 EAL domain SHALO_2121 344bda1f95c7190fb9fab358362868f5 413 SUPERFAMILY SSF141868 5 198 1.03E-26 T 18-10-2018 IPR035919 EAL domain superfamily SHALO_2121 344bda1f95c7190fb9fab358362868f5 413 Gene3D G3DSA:3.20.20.450 3 199 2.2E-14 T 18-10-2018 IPR035919 EAL domain superfamily SHALO_2121 344bda1f95c7190fb9fab358362868f5 413 SUPERFAMILY SSF109604 186 369 6.91E-24 T 18-10-2018 SHALO_2121 344bda1f95c7190fb9fab358362868f5 413 Pfam PF08668 HDOD domain 217 322 4.0E-7 T 18-10-2018 IPR013976 Metal-dependent hydrolase HDOD SHALO_1754 eec4c43f657331da2dcc1daad6c9d830 454 PIRSF PIRSF001495 2 451 9.3E-119 T 18-10-2018 IPR006396 Glutamate mutase epsilon subunit GO:0019670|GO:0050097 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 SHALO_1754 eec4c43f657331da2dcc1daad6c9d830 454 SUPERFAMILY SSF51703 3 453 7.06E-156 T 18-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 SHALO_1754 eec4c43f657331da2dcc1daad6c9d830 454 Pfam PF06368 Methylaspartate mutase E chain (MutE) 42 434 7.1E-120 T 18-10-2018 IPR006396 Glutamate mutase epsilon subunit GO:0019670|GO:0050097 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 SHALO_1754 eec4c43f657331da2dcc1daad6c9d830 454 Gene3D G3DSA:3.20.20.240 2 400 3.0E-129 T 18-10-2018 SHALO_2830 2bdcca621767a82f4a42988eeec74359 144 Pfam PF14537 Cytochrome c3 48 133 1.1E-14 T 18-10-2018 IPR012286 Tetrahaem cytochrome domain KEGG: 00020+1.3.5.4|KEGG: 00620+1.3.5.4|KEGG: 00650+1.3.5.4|KEGG: 00720+1.3.5.4|MetaCyc: PWY-5392|MetaCyc: PWY-5913|MetaCyc: PWY-7384 SHALO_2830 2bdcca621767a82f4a42988eeec74359 144 Gene3D G3DSA:1.10.1130.10 43 142 1.5E-17 T 18-10-2018 SHALO_2830 2bdcca621767a82f4a42988eeec74359 144 SUPERFAMILY SSF48695 39 134 4.19E-14 T 18-10-2018 IPR036280 Multiheme cytochrome superfamily SHALO_1070 5616bce6ae3c339e515188a266482fa2 604 SMART SM00283 316 584 4.1E-30 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_1070 5616bce6ae3c339e515188a266482fa2 604 Gene3D G3DSA:1.10.287.950 262 585 3.6E-51 T 18-10-2018 SHALO_1070 5616bce6ae3c339e515188a266482fa2 604 SUPERFAMILY SSF58104 281 584 2.75E-50 T 18-10-2018 SHALO_1070 5616bce6ae3c339e515188a266482fa2 604 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 390 547 1.0E-33 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_1432 b752af105bead11a1872d9d5f2078771 146 SUPERFAMILY SSF48403 13 138 1.52E-30 T 18-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily SHALO_1432 b752af105bead11a1872d9d5f2078771 146 Pfam PF12796 Ankyrin repeats (3 copies) 8 89 1.0E-9 T 18-10-2018 IPR020683 Ankyrin repeat-containing domain SHALO_1432 b752af105bead11a1872d9d5f2078771 146 Pfam PF00023 Ankyrin repeat 91 120 0.0045 T 18-10-2018 IPR002110 Ankyrin repeat GO:0005515 SHALO_1432 b752af105bead11a1872d9d5f2078771 146 SMART SM00248 25 54 0.024 T 18-10-2018 IPR002110 Ankyrin repeat GO:0005515 SHALO_1432 b752af105bead11a1872d9d5f2078771 146 SMART SM00248 91 120 0.24 T 18-10-2018 IPR002110 Ankyrin repeat GO:0005515 SHALO_1432 b752af105bead11a1872d9d5f2078771 146 SMART SM00248 58 87 0.064 T 18-10-2018 IPR002110 Ankyrin repeat GO:0005515 SHALO_1432 b752af105bead11a1872d9d5f2078771 146 Gene3D G3DSA:1.25.40.20 3 144 1.4E-31 T 18-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily SHALO_1883 e0cf20d2ff1bcd62500fb7eb1da4b088 291 SUPERFAMILY SSF103481 185 285 8.89E-11 T 18-10-2018 SHALO_1883 e0cf20d2ff1bcd62500fb7eb1da4b088 291 Pfam PF00892 EamA-like transporter family 142 281 5.0E-16 T 18-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 SHALO_1883 e0cf20d2ff1bcd62500fb7eb1da4b088 291 Pfam PF00892 EamA-like transporter family 5 132 1.8E-17 T 18-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 SHALO_1883 e0cf20d2ff1bcd62500fb7eb1da4b088 291 SUPERFAMILY SSF103481 41 134 4.84E-10 T 18-10-2018 SHALO_1198 b0f4e0f55c8c7b87c4bd7395c24bfe99 404 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 294 401 1.5E-15 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_1198 b0f4e0f55c8c7b87c4bd7395c24bfe99 404 Gene3D G3DSA:3.30.450.20 29 138 6.8E-14 T 18-10-2018 SHALO_1198 b0f4e0f55c8c7b87c4bd7395c24bfe99 404 SUPERFAMILY SSF47384 174 248 1.0E-9 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SHALO_1198 b0f4e0f55c8c7b87c4bd7395c24bfe99 404 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 30 147 4.2E-12 T 18-10-2018 IPR000014 PAS domain SHALO_1198 b0f4e0f55c8c7b87c4bd7395c24bfe99 404 SMART SM00086 100 140 9.5E-4 T 18-10-2018 IPR001610 PAC motif SHALO_1198 b0f4e0f55c8c7b87c4bd7395c24bfe99 404 SMART SM00387 290 404 2.0E-13 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_1198 b0f4e0f55c8c7b87c4bd7395c24bfe99 404 SMART SM00388 180 250 4.9E-4 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_1198 b0f4e0f55c8c7b87c4bd7395c24bfe99 404 Gene3D G3DSA:1.10.287.130 165 248 1.1E-11 T 18-10-2018 SHALO_1198 b0f4e0f55c8c7b87c4bd7395c24bfe99 404 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 401 7.8E-10 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_1198 b0f4e0f55c8c7b87c4bd7395c24bfe99 404 PRINTS PR00344 Bacterial sensor protein C-terminal signature 351 361 7.8E-10 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_1198 b0f4e0f55c8c7b87c4bd7395c24bfe99 404 PRINTS PR00344 Bacterial sensor protein C-terminal signature 364 382 7.8E-10 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_1198 b0f4e0f55c8c7b87c4bd7395c24bfe99 404 PRINTS PR00344 Bacterial sensor protein C-terminal signature 333 347 7.8E-10 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_1198 b0f4e0f55c8c7b87c4bd7395c24bfe99 404 SMART SM00091 32 98 0.0012 T 18-10-2018 IPR000014 PAS domain SHALO_1198 b0f4e0f55c8c7b87c4bd7395c24bfe99 404 Gene3D G3DSA:3.30.565.10 250 402 1.8E-31 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_1198 b0f4e0f55c8c7b87c4bd7395c24bfe99 404 SUPERFAMILY SSF55785 46 148 9.5E-13 T 18-10-2018 IPR035965 PAS domain superfamily SHALO_1198 b0f4e0f55c8c7b87c4bd7395c24bfe99 404 SUPERFAMILY SSF55874 250 400 9.92E-28 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_1198 b0f4e0f55c8c7b87c4bd7395c24bfe99 404 Pfam PF13426 PAS domain 43 139 1.1E-9 T 18-10-2018 IPR000014 PAS domain SHALO_0266 93a81db48626b8925407121bf9c5383f 139 Gene3D G3DSA:1.10.10.10 1 80 2.6E-24 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_0266 93a81db48626b8925407121bf9c5383f 139 SUPERFAMILY SSF46785 3 122 8.33E-29 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SHALO_0266 93a81db48626b8925407121bf9c5383f 139 Pfam PF01475 Ferric uptake regulator family 11 125 8.1E-28 T 18-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 SHALO_0266 93a81db48626b8925407121bf9c5383f 139 Gene3D G3DSA:3.30.1490.190 82 139 1.2E-6 T 18-10-2018 SHALO_0855 b70d7c129b27380871d1bf4842402bbf 244 Gene3D G3DSA:3.40.980.10 5 165 3.8E-28 T 18-10-2018 IPR036425 MoaB/Mog-like domain superfamily SHALO_0855 b70d7c129b27380871d1bf4842402bbf 244 Pfam PF00994 Probable molybdopterin binding domain 7 161 4.6E-17 T 18-10-2018 IPR001453 MoaB/Mog domain SHALO_0855 b70d7c129b27380871d1bf4842402bbf 244 SUPERFAMILY SSF53218 7 165 9.68E-21 T 18-10-2018 IPR036425 MoaB/Mog-like domain superfamily SHALO_0855 b70d7c129b27380871d1bf4842402bbf 244 SMART SM00852 5 168 3.4E-14 T 18-10-2018 IPR001453 MoaB/Mog domain SHALO_0099 8092e0651d31a3886187130f1391262e 442 PRINTS PR00145 Argininosuccinate lyase family signature 261 277 4.3E-7 T 18-10-2018 SHALO_0099 8092e0651d31a3886187130f1391262e 442 PRINTS PR00145 Argininosuccinate lyase family signature 87 109 4.3E-7 T 18-10-2018 SHALO_0099 8092e0651d31a3886187130f1391262e 442 PRINTS PR00145 Argininosuccinate lyase family signature 128 148 4.3E-7 T 18-10-2018 SHALO_0099 8092e0651d31a3886187130f1391262e 442 PRINTS PR00145 Argininosuccinate lyase family signature 216 240 4.3E-7 T 18-10-2018 SHALO_0099 8092e0651d31a3886187130f1391262e 442 Pfam PF00206 Lyase 7 284 5.0E-53 T 18-10-2018 IPR022761 Fumarate lyase, N-terminal SHALO_0099 8092e0651d31a3886187130f1391262e 442 SMART SM00998 349 441 2.9E-35 T 18-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 SHALO_0099 8092e0651d31a3886187130f1391262e 442 Pfam PF10397 Adenylosuccinate lyase C-terminus 350 440 4.5E-26 T 18-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 SHALO_0099 8092e0651d31a3886187130f1391262e 442 Gene3D G3DSA:1.10.275.10 1 92 1.1E-33 T 18-10-2018 IPR024083 Fumarase/histidase, N-terminal SHALO_0099 8092e0651d31a3886187130f1391262e 442 Gene3D G3DSA:1.10.40.30 349 440 1.0E-24 T 18-10-2018 SHALO_0099 8092e0651d31a3886187130f1391262e 442 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 1 441 2.1E-170 T 18-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 SHALO_0099 8092e0651d31a3886187130f1391262e 442 Gene3D G3DSA:1.20.200.10 93 348 4.4E-90 T 18-10-2018 SHALO_0099 8092e0651d31a3886187130f1391262e 442 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 4.5E-23 T 18-10-2018 IPR000362 Fumarate lyase family SHALO_0099 8092e0651d31a3886187130f1391262e 442 PRINTS PR00149 Fumarate lyase superfamily signature 88 106 4.5E-23 T 18-10-2018 IPR000362 Fumarate lyase family SHALO_0099 8092e0651d31a3886187130f1391262e 442 PRINTS PR00149 Fumarate lyase superfamily signature 216 243 4.5E-23 T 18-10-2018 IPR000362 Fumarate lyase family SHALO_0099 8092e0651d31a3886187130f1391262e 442 PRINTS PR00149 Fumarate lyase superfamily signature 261 277 4.5E-23 T 18-10-2018 IPR000362 Fumarate lyase family SHALO_0099 8092e0651d31a3886187130f1391262e 442 ProSitePatterns PS00163 Fumarate lyases signature. 261 270 - T 18-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 SHALO_0099 8092e0651d31a3886187130f1391262e 442 SUPERFAMILY SSF48557 3 441 4.24E-126 T 18-10-2018 IPR008948 L-Aspartase-like GO:0003824 SHALO_0249 9d599b561a23130cfd548b9d077e4778 304 SUPERFAMILY SSF51730 13 303 6.87E-39 T 18-10-2018 IPR029041 FAD-linked oxidoreductase-like SHALO_0249 9d599b561a23130cfd548b9d077e4778 304 Pfam PF02219 Methylenetetrahydrofolate reductase 62 302 3.4E-17 T 18-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 SHALO_0249 9d599b561a23130cfd548b9d077e4778 304 Gene3D G3DSA:3.20.20.220 2 304 1.6E-28 T 18-10-2018 SHALO_2930 8c286675e9e929be094ba2025e7602a0 281 SMART SM00729 8 213 1.5E-30 T 18-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 SHALO_2930 8c286675e9e929be094ba2025e7602a0 281 TIGRFAM TIGR00433 bioB: biotin synthase 2 273 7.4E-87 T 18-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 SHALO_2930 8c286675e9e929be094ba2025e7602a0 281 PIRSF PIRSF001619 1 280 3.8E-81 T 18-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 SHALO_2930 8c286675e9e929be094ba2025e7602a0 281 SUPERFAMILY SSF102114 4 275 2.88E-53 T 18-10-2018 SHALO_2930 8c286675e9e929be094ba2025e7602a0 281 Pfam PF04055 Radical SAM superfamily 16 174 7.5E-16 T 18-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 SHALO_2930 8c286675e9e929be094ba2025e7602a0 281 SMART SM00876 185 275 2.6E-15 T 18-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 SHALO_2930 8c286675e9e929be094ba2025e7602a0 281 Hamap MF_01694 Biotin synthase [bioB]. 2 276 32.479 T 18-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 SHALO_2930 8c286675e9e929be094ba2025e7602a0 281 Gene3D G3DSA:3.20.20.70 1 277 9.0E-85 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_2930 8c286675e9e929be094ba2025e7602a0 281 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 200 273 4.8E-11 T 18-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 SHALO_1186 c0a01960da1c2db091093d7a90143a0c 130 SUPERFAMILY SSF52833 23 125 2.76E-22 T 18-10-2018 IPR036249 Thioredoxin-like superfamily SHALO_1186 c0a01960da1c2db091093d7a90143a0c 130 Gene3D G3DSA:3.40.30.10 19 129 3.0E-19 T 18-10-2018 SHALO_1186 c0a01960da1c2db091093d7a90143a0c 130 Pfam PF13899 Thioredoxin-like 23 99 3.1E-14 T 18-10-2018 SHALO_0662 03c44a14de16c2270c5f19ad16607ff2 446 Gene3D G3DSA:3.50.50.60 3 144 7.7E-12 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SHALO_0662 03c44a14de16c2270c5f19ad16607ff2 446 SUPERFAMILY SSF51905 1 295 3.56E-24 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SHALO_0662 03c44a14de16c2270c5f19ad16607ff2 446 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 5 413 7.0E-27 T 18-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 SHALO_1248 a62e11b89e3a3af4dcf72b9402678287 381 Gene3D G3DSA:3.30.70.270 208 381 1.2E-53 T 18-10-2018 SHALO_1248 a62e11b89e3a3af4dcf72b9402678287 381 SMART SM00267 210 381 4.6E-57 T 18-10-2018 IPR000160 GGDEF domain SHALO_1248 a62e11b89e3a3af4dcf72b9402678287 381 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 217 380 3.7E-51 T 18-10-2018 IPR000160 GGDEF domain SHALO_1248 a62e11b89e3a3af4dcf72b9402678287 381 SUPERFAMILY SSF55073 226 380 3.14E-45 T 18-10-2018 IPR029787 Nucleotide cyclase SHALO_1248 a62e11b89e3a3af4dcf72b9402678287 381 Pfam PF00990 Diguanylate cyclase, GGDEF domain 221 378 6.5E-45 T 18-10-2018 IPR000160 GGDEF domain SHALO_1422 66f555ae8851a0e1153f6ca751f668b7 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 18-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site SHALO_1422 66f555ae8851a0e1153f6ca751f668b7 290 SUPERFAMILY SSF52210 123 288 2.22E-50 T 18-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 SHALO_1422 66f555ae8851a0e1153f6ca751f668b7 290 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 2.7E-32 T 18-10-2018 SHALO_1422 66f555ae8851a0e1153f6ca751f668b7 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 2.7E-32 T 18-10-2018 SHALO_1422 66f555ae8851a0e1153f6ca751f668b7 290 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 2.7E-32 T 18-10-2018 SHALO_1422 66f555ae8851a0e1153f6ca751f668b7 290 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 2.7E-32 T 18-10-2018 SHALO_1422 66f555ae8851a0e1153f6ca751f668b7 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 288 5.2E-131 T 18-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 SHALO_1422 66f555ae8851a0e1153f6ca751f668b7 290 Gene3D G3DSA:3.40.50.720 1 123 3.9E-49 T 18-10-2018 SHALO_1422 66f555ae8851a0e1153f6ca751f668b7 290 Pfam PF00549 CoA-ligase 151 270 3.5E-14 T 18-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 SHALO_1422 66f555ae8851a0e1153f6ca751f668b7 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 18-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site SHALO_1422 66f555ae8851a0e1153f6ca751f668b7 290 Pfam PF02629 CoA binding domain 6 99 1.7E-28 T 18-10-2018 IPR003781 CoA-binding GO:0048037 SHALO_1422 66f555ae8851a0e1153f6ca751f668b7 290 SMART SM00881 4 100 5.3E-35 T 18-10-2018 IPR003781 CoA-binding GO:0048037 SHALO_1422 66f555ae8851a0e1153f6ca751f668b7 290 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 42.156 T 18-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 SHALO_1422 66f555ae8851a0e1153f6ca751f668b7 290 PIRSF PIRSF001553 1 290 5.9E-128 T 18-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 SHALO_1422 66f555ae8851a0e1153f6ca751f668b7 290 SUPERFAMILY SSF51735 1 122 1.23E-40 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_1422 66f555ae8851a0e1153f6ca751f668b7 290 Gene3D G3DSA:3.40.50.261 124 289 1.3E-68 T 18-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 SHALO_0188 4c1d5d66d7391597c202b7664fda1e5e 825 Gene3D G3DSA:3.10.20.740 4 123 1.4E-34 T 18-10-2018 SHALO_0188 4c1d5d66d7391597c202b7664fda1e5e 825 Gene3D G3DSA:3.30.70.20 125 226 7.4E-12 T 18-10-2018 SHALO_0188 4c1d5d66d7391597c202b7664fda1e5e 825 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 83 121 2.6E-13 T 18-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0188 4c1d5d66d7391597c202b7664fda1e5e 825 SUPERFAMILY SSF54862 75 229 6.28E-28 T 18-10-2018 SHALO_0188 4c1d5d66d7391597c202b7664fda1e5e 825 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 4 76 9.7E-13 T 18-10-2018 SHALO_0188 4c1d5d66d7391597c202b7664fda1e5e 825 SUPERFAMILY SSF54292 4 74 1.27E-14 T 18-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 SHALO_0188 4c1d5d66d7391597c202b7664fda1e5e 825 SUPERFAMILY SSF53706 236 667 4.71E-18 T 18-10-2018 SHALO_0188 4c1d5d66d7391597c202b7664fda1e5e 825 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 209 220 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_0188 4c1d5d66d7391597c202b7664fda1e5e 825 SMART SM00929 83 123 2.1E-14 T 18-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0881 4701ed6ae454688b460705d86bf5520d 165 Gene3D G3DSA:3.40.50.300 3 165 3.5E-34 T 18-10-2018 SHALO_0881 4701ed6ae454688b460705d86bf5520d 165 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 7 159 4.6E-34 T 18-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 SHALO_0881 4701ed6ae454688b460705d86bf5520d 165 SUPERFAMILY SSF52540 6 160 1.23E-17 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0881 4701ed6ae454688b460705d86bf5520d 165 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 6 117 7.3E-24 T 18-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 SHALO_1706 3e29d278aa405c83dc028ba9deb354e1 283 TIGRFAM TIGR00761 argB: acetylglutamate kinase 25 258 2.9E-78 T 18-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 SHALO_1706 3e29d278aa405c83dc028ba9deb354e1 283 SUPERFAMILY SSF53633 4 282 7.33E-88 T 18-10-2018 IPR036393 Acetylglutamate kinase-like superfamily SHALO_1706 3e29d278aa405c83dc028ba9deb354e1 283 Pfam PF00696 Amino acid kinase family 24 259 3.5E-46 T 18-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 SHALO_1706 3e29d278aa405c83dc028ba9deb354e1 283 Hamap MF_00082 Acetylglutamate kinase [argB]. 23 276 47.563 T 18-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 SHALO_1706 3e29d278aa405c83dc028ba9deb354e1 283 PIRSF PIRSF000728 9 283 2.4E-105 T 18-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 SHALO_1706 3e29d278aa405c83dc028ba9deb354e1 283 PRINTS PR01469 Bacterial carbamate kinase signature 183 198 3.7E-5 T 18-10-2018 SHALO_1706 3e29d278aa405c83dc028ba9deb354e1 283 PRINTS PR01469 Bacterial carbamate kinase signature 233 248 3.7E-5 T 18-10-2018 SHALO_1706 3e29d278aa405c83dc028ba9deb354e1 283 PRINTS PR01469 Bacterial carbamate kinase signature 55 74 3.7E-5 T 18-10-2018 SHALO_1706 3e29d278aa405c83dc028ba9deb354e1 283 Gene3D G3DSA:3.40.1160.10 2 283 1.6E-93 T 18-10-2018 IPR036393 Acetylglutamate kinase-like superfamily SHALO_2246 70fa20d3308304204c0f523fefc74261 191 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 34 183 7.8E-68 T 18-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 SHALO_2246 70fa20d3308304204c0f523fefc74261 191 Pfam PF13580 SIS domain 10 144 5.5E-30 T 18-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 SHALO_2246 70fa20d3308304204c0f523fefc74261 191 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 187 37.762 T 18-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 SHALO_2246 70fa20d3308304204c0f523fefc74261 191 SUPERFAMILY SSF53697 1 185 2.43E-56 T 18-10-2018 SHALO_2246 70fa20d3308304204c0f523fefc74261 191 Gene3D G3DSA:3.40.50.10490 1 187 1.5E-75 T 18-10-2018 SHALO_1589 dc908fcda7d3d329aa7368708aebb2cb 248 Pfam PF10670 Domain of unknown function (DUF4198) 15 220 4.2E-49 T 18-10-2018 IPR019613 Protein of unknown function DUF4198 SHALO_2954 e0d814cfb6105d05da5784533139616a 150 Gene3D G3DSA:3.40.630.30 4 149 4.1E-30 T 18-10-2018 SHALO_2954 e0d814cfb6105d05da5784533139616a 150 Pfam PF00583 Acetyltransferase (GNAT) family 39 126 3.9E-11 T 18-10-2018 IPR000182 GNAT domain SHALO_2954 e0d814cfb6105d05da5784533139616a 150 SUPERFAMILY SSF55729 31 148 1.1E-21 T 18-10-2018 IPR016181 Acyl-CoA N-acyltransferase SHALO_2424 fcd040cdb226e80f7d151c25e85d1f3e 181 PIRSF PIRSF002161 1 181 3.5E-58 T 18-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_2424 fcd040cdb226e80f7d151c25e85d1f3e 181 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 38.499 T 18-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_2424 fcd040cdb226e80f7d151c25e85d1f3e 181 Gene3D G3DSA:3.30.1440.10 1 179 1.0E-68 T 18-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_2424 fcd040cdb226e80f7d151c25e85d1f3e 181 Pfam PF00281 Ribosomal protein L5 24 80 5.7E-20 T 18-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_2424 fcd040cdb226e80f7d151c25e85d1f3e 181 Pfam PF00673 ribosomal L5P family C-terminus 84 177 7.4E-36 T 18-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_2424 fcd040cdb226e80f7d151c25e85d1f3e 181 SUPERFAMILY SSF55282 3 178 2.35E-64 T 18-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_2384 eb85ed32b37cf81500af8443859f4dd4 282 Gene3D G3DSA:1.10.760.10 195 281 1.8E-12 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_2384 eb85ed32b37cf81500af8443859f4dd4 282 SUPERFAMILY SSF46626 199 280 5.28E-14 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_2384 eb85ed32b37cf81500af8443859f4dd4 282 PIRSF PIRSF000006 11 282 2.8E-59 T 18-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III SHALO_2384 eb85ed32b37cf81500af8443859f4dd4 282 SUPERFAMILY SSF46626 60 191 9.61E-17 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_2384 eb85ed32b37cf81500af8443859f4dd4 282 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 204 277 4.9E-8 T 18-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_2384 eb85ed32b37cf81500af8443859f4dd4 282 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 117 189 6.1E-7 T 18-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_2384 eb85ed32b37cf81500af8443859f4dd4 282 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 42 88 1.0E-15 T 18-10-2018 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal SHALO_2384 eb85ed32b37cf81500af8443859f4dd4 282 Gene3D G3DSA:1.10.760.10 101 194 1.9E-10 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_2384 eb85ed32b37cf81500af8443859f4dd4 282 Gene3D G3DSA:1.20.58.1490 8 99 3.9E-10 T 18-10-2018 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily SHALO_1398 3bc0df865f90924454882e82fa096137 296 SUPERFAMILY SSF56770 4 247 3.14E-56 T 18-10-2018 SHALO_1398 3bc0df865f90924454882e82fa096137 296 Gene3D G3DSA:4.10.480.10 175 253 1.9E-20 T 18-10-2018 IPR037148 [NiFe]-hydrogenase, small subunit, C-terminal domain superfamily SHALO_1398 3bc0df865f90924454882e82fa096137 296 Gene3D G3DSA:3.40.50.700 1 174 2.1E-31 T 18-10-2018 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily SHALO_1398 3bc0df865f90924454882e82fa096137 296 Pfam PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal 175 248 3.5E-23 T 18-10-2018 IPR027394 Cytochrome-c3 hydrogenase, C-terminal SHALO_1398 3bc0df865f90924454882e82fa096137 296 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 15 157 2.5E-21 T 18-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_1398 3bc0df865f90924454882e82fa096137 296 PIRSF PIRSF000310 1 296 1.4E-60 T 18-10-2018 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SHALO_1398 3bc0df865f90924454882e82fa096137 296 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 201 227 5.5E-11 T 18-10-2018 SHALO_1398 3bc0df865f90924454882e82fa096137 296 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 86 100 5.5E-11 T 18-10-2018 SHALO_1398 3bc0df865f90924454882e82fa096137 296 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 137 160 5.5E-11 T 18-10-2018 SHALO_1398 3bc0df865f90924454882e82fa096137 296 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 228 241 5.5E-11 T 18-10-2018 SHALO_0747 385b15a4a846f64fc2723a1cc9f7b466 154 Pfam PF01475 Ferric uptake regulator family 23 142 2.5E-37 T 18-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 SHALO_0747 385b15a4a846f64fc2723a1cc9f7b466 154 SUPERFAMILY SSF46785 15 147 2.04E-33 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SHALO_0747 385b15a4a846f64fc2723a1cc9f7b466 154 Gene3D G3DSA:3.30.1490.190 98 154 2.2E-21 T 18-10-2018 SHALO_0747 385b15a4a846f64fc2723a1cc9f7b466 154 Gene3D G3DSA:1.10.10.10 6 97 5.6E-29 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_0404 91c42b8e0d2b694d2b08c1c9756edcde 260 Pfam PF04055 Radical SAM superfamily 12 143 1.8E-9 T 18-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 SHALO_0404 91c42b8e0d2b694d2b08c1c9756edcde 260 SUPERFAMILY SSF102114 12 176 8.5E-18 T 18-10-2018 SHALO_0404 91c42b8e0d2b694d2b08c1c9756edcde 260 Gene3D G3DSA:3.20.20.70 4 213 1.1E-18 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_0250 29392e93e40dbb1879aeed21d0afe1bb 206 Pfam PF12710 haloacid dehalogenase-like hydrolase 5 172 6.5E-22 T 18-10-2018 SHALO_0250 29392e93e40dbb1879aeed21d0afe1bb 206 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 2 206 1.1E-72 T 18-10-2018 SHALO_0250 29392e93e40dbb1879aeed21d0afe1bb 206 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 172 5.8E-28 T 18-10-2018 SHALO_0250 29392e93e40dbb1879aeed21d0afe1bb 206 SUPERFAMILY SSF56784 1 206 2.04E-47 T 18-10-2018 IPR036412 HAD-like superfamily SHALO_0250 29392e93e40dbb1879aeed21d0afe1bb 206 Gene3D G3DSA:3.40.50.1000 1 206 7.5E-64 T 18-10-2018 IPR023214 HAD superfamily SHALO_2864 835805c1af3678963bf4e0359c7ccb16 223 Gene3D G3DSA:3.40.50.2300 1 122 2.7E-41 T 18-10-2018 SHALO_2864 835805c1af3678963bf4e0359c7ccb16 223 SUPERFAMILY SSF52172 1 175 5.71E-40 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_2864 835805c1af3678963bf4e0359c7ccb16 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 220 5.1E-22 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_2864 835805c1af3678963bf4e0359c7ccb16 223 Pfam PF00072 Response regulator receiver domain 4 113 1.8E-29 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_2864 835805c1af3678963bf4e0359c7ccb16 223 SMART SM00448 1 112 7.9E-41 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_2864 835805c1af3678963bf4e0359c7ccb16 223 SMART SM00862 145 220 1.5E-21 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_2864 835805c1af3678963bf4e0359c7ccb16 223 Gene3D G3DSA:1.10.10.10 125 223 3.0E-26 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_1316 98a47d5f1b7f304456ae969552de4cb3 281 Gene3D G3DSA:3.40.50.11800 1 129 3.0E-9 T 18-10-2018 SHALO_1316 98a47d5f1b7f304456ae969552de4cb3 281 Gene3D G3DSA:3.40.50.11810 135 281 1.2E-9 T 18-10-2018 SHALO_0635 c3cf42ac2ca856cbe58715a1190140b4 294 Pfam PF02653 Branched-chain amino acid transport system / permease component 6 277 3.6E-39 T 18-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 SHALO_1360 fe353e2b714b8a38465ff0e4af0e73cd 125 SUPERFAMILY SSF101116 6 118 2.22E-32 T 18-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 SHALO_1360 fe353e2b714b8a38465ff0e4af0e73cd 125 TIGRFAM TIGR00208 fliS: flagellar protein FliS 1 119 4.5E-41 T 18-10-2018 IPR003713 Flagellar protein FliS GO:0044780 SHALO_1360 fe353e2b714b8a38465ff0e4af0e73cd 125 PIRSF PIRSF039090 1 124 6.6E-31 T 18-10-2018 IPR003713 Flagellar protein FliS GO:0044780 SHALO_1360 fe353e2b714b8a38465ff0e4af0e73cd 125 Gene3D G3DSA:1.20.120.340 1 123 3.9E-36 T 18-10-2018 SHALO_1360 fe353e2b714b8a38465ff0e4af0e73cd 125 Pfam PF02561 Flagellar protein FliS 7 118 2.9E-33 T 18-10-2018 IPR003713 Flagellar protein FliS GO:0044780 SHALO_0982 ec376a2a0baa5b1481b0814d28acc9a2 203 Pfam PF13309 HTH domain 139 199 1.7E-15 T 18-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain SHALO_0982 ec376a2a0baa5b1481b0814d28acc9a2 203 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 5 105 3.0E-20 T 18-10-2018 IPR013559 YheO-like SHALO_0982 ec376a2a0baa5b1481b0814d28acc9a2 203 Pfam PF08348 YheO-like PAS domain 5 108 7.6E-25 T 18-10-2018 IPR013559 YheO-like SHALO_1622 40d0d8cca0fc075282b2d8c90d7b0136 398 Gene3D G3DSA:3.40.980.10 174 326 6.6E-98 T 18-10-2018 IPR036425 MoaB/Mog-like domain superfamily SHALO_1622 40d0d8cca0fc075282b2d8c90d7b0136 398 Pfam PF00994 Probable molybdopterin binding domain 179 315 4.1E-20 T 18-10-2018 IPR001453 MoaB/Mog domain SHALO_1622 40d0d8cca0fc075282b2d8c90d7b0136 398 SUPERFAMILY SSF53218 177 321 1.44E-34 T 18-10-2018 IPR036425 MoaB/Mog-like domain superfamily SHALO_1622 40d0d8cca0fc075282b2d8c90d7b0136 398 Pfam PF03453 MoeA N-terminal region (domain I and II) 8 166 4.6E-32 T 18-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 SHALO_1622 40d0d8cca0fc075282b2d8c90d7b0136 398 SUPERFAMILY SSF63882 6 175 3.53E-42 T 18-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 SHALO_1622 40d0d8cca0fc075282b2d8c90d7b0136 398 Gene3D G3DSA:2.170.190.11 50 140 6.6E-98 T 18-10-2018 SHALO_1622 40d0d8cca0fc075282b2d8c90d7b0136 398 Gene3D G3DSA:3.90.105.10 26 173 6.6E-98 T 18-10-2018 SHALO_1622 40d0d8cca0fc075282b2d8c90d7b0136 398 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 251 285 - T 18-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 SHALO_1622 40d0d8cca0fc075282b2d8c90d7b0136 398 Gene3D G3DSA:2.40.340.10 327 387 6.6E-98 T 18-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 SHALO_1622 40d0d8cca0fc075282b2d8c90d7b0136 398 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 175 305 5.1E-25 T 18-10-2018 IPR001453 MoaB/Mog domain SHALO_1622 40d0d8cca0fc075282b2d8c90d7b0136 398 SUPERFAMILY SSF63867 328 398 6.54E-7 T 18-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 SHALO_1622 40d0d8cca0fc075282b2d8c90d7b0136 398 SMART SM00852 179 316 1.2E-30 T 18-10-2018 IPR001453 MoaB/Mog domain SHALO_1881 aa58ca33faa5f74785ba4047039367be 393 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 246 382 1.6E-28 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_1881 aa58ca33faa5f74785ba4047039367be 393 SMART SM00283 179 393 3.1E-8 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_1881 aa58ca33faa5f74785ba4047039367be 393 SUPERFAMILY SSF58104 184 384 5.1E-46 T 18-10-2018 SHALO_1881 aa58ca33faa5f74785ba4047039367be 393 Gene3D G3DSA:1.10.287.950 177 391 1.3E-39 T 18-10-2018 SHALO_0012 4615e4fbdc6756ef88c197059453a7d9 335 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 39 317 1.1E-43 T 18-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 SHALO_0012 4615e4fbdc6756ef88c197059453a7d9 335 Gene3D G3DSA:3.40.190.100 120 258 5.1E-120 T 18-10-2018 SHALO_0012 4615e4fbdc6756ef88c197059453a7d9 335 Gene3D G3DSA:3.40.190.10 28 330 5.1E-120 T 18-10-2018 SHALO_0012 4615e4fbdc6756ef88c197059453a7d9 335 SUPERFAMILY SSF53850 27 331 4.61E-73 T 18-10-2018 SHALO_0161 8f9d1503cfb982c031871fe4b91fcdd9 393 Pfam PF00909 Ammonium Transporter Family 14 385 1.7E-98 T 18-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 SHALO_0161 8f9d1503cfb982c031871fe4b91fcdd9 393 Gene3D G3DSA:1.10.3430.10 1 393 3.9E-119 T 18-10-2018 IPR029020 Ammonium/urea transporter SHALO_0161 8f9d1503cfb982c031871fe4b91fcdd9 393 SUPERFAMILY SSF111352 9 365 3.01E-99 T 18-10-2018 SHALO_0755 a876e2f036ba1f1d14e0346b26501af6 208 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 1 199 1.7E-21 T 18-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 SHALO_0755 a876e2f036ba1f1d14e0346b26501af6 208 Pfam PF03309 Type III pantothenate kinase 69 163 8.2E-11 T 18-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 SHALO_0755 a876e2f036ba1f1d14e0346b26501af6 208 Gene3D G3DSA:3.30.420.40 59 208 3.7E-46 T 18-10-2018 SHALO_0755 a876e2f036ba1f1d14e0346b26501af6 208 SUPERFAMILY SSF53067 84 202 9.06E-24 T 18-10-2018 SHALO_0755 a876e2f036ba1f1d14e0346b26501af6 208 Gene3D G3DSA:3.30.420.40 1 58 7.7E-19 T 18-10-2018 SHALO_0755 a876e2f036ba1f1d14e0346b26501af6 208 SUPERFAMILY SSF53067 1 82 2.27E-30 T 18-10-2018 SHALO_1601 a9c3fc4af5051f69099f7c4f32c15e18 563 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 166 2.0E-58 T 18-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 SHALO_1601 a9c3fc4af5051f69099f7c4f32c15e18 563 SUPERFAMILY SSF52467 185 356 2.55E-60 T 18-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily SHALO_1601 a9c3fc4af5051f69099f7c4f32c15e18 563 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 425 444 - T 18-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 SHALO_1601 a9c3fc4af5051f69099f7c4f32c15e18 563 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 193 327 3.8E-46 T 18-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 SHALO_1601 a9c3fc4af5051f69099f7c4f32c15e18 563 SUPERFAMILY SSF52518 366 562 2.66E-71 T 18-10-2018 IPR029061 Thiamin diphosphate-binding fold SHALO_1601 a9c3fc4af5051f69099f7c4f32c15e18 563 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 388 536 3.0E-53 T 18-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 SHALO_1601 a9c3fc4af5051f69099f7c4f32c15e18 563 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 3 559 3.4E-247 T 18-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 SHALO_1601 a9c3fc4af5051f69099f7c4f32c15e18 563 Gene3D G3DSA:3.40.50.970 1 184 2.9E-71 T 18-10-2018 SHALO_1601 a9c3fc4af5051f69099f7c4f32c15e18 563 Gene3D G3DSA:3.40.50.970 357 563 3.9E-71 T 18-10-2018 SHALO_1601 a9c3fc4af5051f69099f7c4f32c15e18 563 Gene3D G3DSA:3.40.50.1220 187 353 1.9E-57 T 18-10-2018 SHALO_1601 a9c3fc4af5051f69099f7c4f32c15e18 563 SUPERFAMILY SSF52518 2 182 4.32E-64 T 18-10-2018 IPR029061 Thiamin diphosphate-binding fold SHALO_1892 d38314722e750da123833dd213c689af 310 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 21 247 7.6E-9 T 18-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase SHALO_1892 d38314722e750da123833dd213c689af 310 SUPERFAMILY SSF56219 16 305 1.13E-35 T 18-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily SHALO_1892 d38314722e750da123833dd213c689af 310 Gene3D G3DSA:3.60.10.10 13 306 1.3E-36 T 18-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily SHALO_2783 0e8b17065312ec331fc28eb06a2e0db6 192 Pfam PF00551 Formyl transferase 4 185 8.2E-42 T 18-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SHALO_2783 0e8b17065312ec331fc28eb06a2e0db6 192 Gene3D G3DSA:3.40.50.170 2 190 8.7E-62 T 18-10-2018 SHALO_2783 0e8b17065312ec331fc28eb06a2e0db6 192 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 4 191 7.7E-50 T 18-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 SHALO_2783 0e8b17065312ec331fc28eb06a2e0db6 192 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 5 191 25.441 T 18-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 SHALO_2783 0e8b17065312ec331fc28eb06a2e0db6 192 SUPERFAMILY SSF53328 4 191 9.29E-48 T 18-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SHALO_2031 bbc95136aa61452f997943ebbccc5b8f 180 Gene3D G3DSA:2.40.30.60 7 86 5.9E-11 T 18-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 SHALO_2031 bbc95136aa61452f997943ebbccc5b8f 180 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 7 176 17.733 T 18-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 SHALO_2031 bbc95136aa61452f997943ebbccc5b8f 180 Pfam PF01782 RimM N-terminal domain 9 84 2.0E-13 T 18-10-2018 IPR002676 RimM, N-terminal GO:0006364 SHALO_2031 bbc95136aa61452f997943ebbccc5b8f 180 SUPERFAMILY SSF50346 98 168 9.02E-10 T 18-10-2018 IPR011033 PRC-barrel-like superfamily SHALO_2031 bbc95136aa61452f997943ebbccc5b8f 180 Gene3D G3DSA:2.30.30.240 93 179 5.6E-12 T 18-10-2018 SHALO_2031 bbc95136aa61452f997943ebbccc5b8f 180 SUPERFAMILY SSF50447 7 85 1.27E-9 T 18-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily SHALO_2031 bbc95136aa61452f997943ebbccc5b8f 180 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 8 171 6.0E-31 T 18-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 SHALO_2706 fa223e22d556adaa09754e2c0a796258 226 SMART SM00448 3 113 1.2E-31 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_2706 fa223e22d556adaa09754e2c0a796258 226 SMART SM00862 148 224 1.4E-19 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_2706 fa223e22d556adaa09754e2c0a796258 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 224 3.5E-21 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_2706 fa223e22d556adaa09754e2c0a796258 226 Gene3D G3DSA:3.40.50.2300 1 119 1.0E-29 T 18-10-2018 SHALO_2706 fa223e22d556adaa09754e2c0a796258 226 Pfam PF00072 Response regulator receiver domain 6 113 3.4E-23 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_2706 fa223e22d556adaa09754e2c0a796258 226 Gene3D G3DSA:1.10.10.10 120 225 1.2E-27 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_2706 fa223e22d556adaa09754e2c0a796258 226 SUPERFAMILY SSF46894 127 224 3.12E-23 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHALO_2706 fa223e22d556adaa09754e2c0a796258 226 SUPERFAMILY SSF52172 3 127 1.22E-34 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_2608 9465bf03df7858e11617a294b8c6dbb5 206 SUPERFAMILY SSF53955 26 190 2.51E-19 T 18-10-2018 IPR023346 Lysozyme-like domain superfamily SHALO_2608 9465bf03df7858e11617a294b8c6dbb5 206 Pfam PF01464 Transglycosylase SLT domain 27 171 1.9E-14 T 18-10-2018 IPR008258 Transglycosylase SLT domain 1 SHALO_0710 7586341e15bb9b150708a028d9d6c294 194 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 11 42 2.5E-5 T 18-10-2018 IPR001451 Hexapeptide repeat SHALO_0710 7586341e15bb9b150708a028d9d6c294 194 Gene3D G3DSA:2.160.10.10 1 165 3.5E-40 T 18-10-2018 SHALO_0710 7586341e15bb9b150708a028d9d6c294 194 SUPERFAMILY SSF51161 4 159 2.23E-28 T 18-10-2018 IPR011004 Trimeric LpxA-like superfamily SHALO_1740 ec978e0d3c29d7f7295693f89c423836 226 SMART SM00862 148 224 1.1E-19 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_1740 ec978e0d3c29d7f7295693f89c423836 226 Gene3D G3DSA:1.10.10.10 128 226 1.1E-25 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_1740 ec978e0d3c29d7f7295693f89c423836 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 224 2.5E-20 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_1740 ec978e0d3c29d7f7295693f89c423836 226 Pfam PF00072 Response regulator receiver domain 4 112 2.2E-25 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_1740 ec978e0d3c29d7f7295693f89c423836 226 Gene3D G3DSA:3.40.50.2300 1 127 1.6E-33 T 18-10-2018 SHALO_1740 ec978e0d3c29d7f7295693f89c423836 226 SUPERFAMILY SSF46894 126 224 2.13E-22 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHALO_1740 ec978e0d3c29d7f7295693f89c423836 226 SMART SM00448 2 112 8.5E-36 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_1740 ec978e0d3c29d7f7295693f89c423836 226 SUPERFAMILY SSF52172 2 130 8.25E-37 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_2993 8c2547dfb64f584f1454ade709f9ace3 221 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 91 102 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_2993 8c2547dfb64f584f1454ade709f9ace3 221 Gene3D G3DSA:3.30.70.20 3 180 2.3E-51 T 18-10-2018 SHALO_2993 8c2547dfb64f584f1454ade709f9ace3 221 SUPERFAMILY SSF54862 1 187 9.52E-55 T 18-10-2018 SHALO_2993 8c2547dfb64f584f1454ade709f9ace3 221 Gene3D G3DSA:3.30.70.20 65 117 2.3E-51 T 18-10-2018 SHALO_2993 8c2547dfb64f584f1454ade709f9ace3 221 Pfam PF13247 4Fe-4S dicluster domain 54 147 7.3E-20 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_2669 514210c9a50290a9ad3e06e9b357fc72 257 Gene3D G3DSA:2.40.50.100 191 256 2.8E-17 T 18-10-2018 SHALO_2669 514210c9a50290a9ad3e06e9b357fc72 257 Gene3D G3DSA:2.40.50.100 120 186 5.4E-21 T 18-10-2018 SHALO_2669 514210c9a50290a9ad3e06e9b357fc72 257 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 120 187 1.8E-18 T 18-10-2018 IPR004606 Molybdenum-pterin binding GO:0015689 SHALO_2669 514210c9a50290a9ad3e06e9b357fc72 257 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 20 82 6.3E-11 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SHALO_2669 514210c9a50290a9ad3e06e9b357fc72 257 PIRSF PIRSF005763 1 257 6.9E-87 T 18-10-2018 IPR016462 Molybdate-dependent transcriptional regulator ModE GO:0006355|GO:0015689|GO:0030151 SHALO_2669 514210c9a50290a9ad3e06e9b357fc72 257 SUPERFAMILY SSF50331 171 255 2.92E-15 T 18-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal SHALO_2669 514210c9a50290a9ad3e06e9b357fc72 257 SUPERFAMILY SSF50331 120 187 1.48E-16 T 18-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal SHALO_2669 514210c9a50290a9ad3e06e9b357fc72 257 Pfam PF03459 TOBE domain 195 255 1.6E-11 T 18-10-2018 IPR005116 Transport-associated OB, type 1 SHALO_2669 514210c9a50290a9ad3e06e9b357fc72 257 Pfam PF03459 TOBE domain 123 184 6.0E-11 T 18-10-2018 IPR005116 Transport-associated OB, type 1 SHALO_2669 514210c9a50290a9ad3e06e9b357fc72 257 SUPERFAMILY SSF46785 3 106 1.16E-24 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SHALO_2669 514210c9a50290a9ad3e06e9b357fc72 257 Gene3D G3DSA:1.10.10.10 1 106 5.0E-34 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_1168 fea9622e90209230e07eb938cc87e3b0 295 Gene3D G3DSA:1.10.150.130 1 106 9.7E-21 T 18-10-2018 IPR010998 Integrase/recombinase, N-terminal SHALO_1168 fea9622e90209230e07eb938cc87e3b0 295 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 2 59 1.9E-11 T 18-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 SHALO_1168 fea9622e90209230e07eb938cc87e3b0 295 Gene3D G3DSA:1.10.443.10 107 289 2.5E-24 T 18-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 SHALO_1168 fea9622e90209230e07eb938cc87e3b0 295 SUPERFAMILY SSF56349 1 285 1.32E-45 T 18-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SHALO_1168 fea9622e90209230e07eb938cc87e3b0 295 Pfam PF00589 Phage integrase family 127 276 2.2E-15 T 18-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SHALO_0972 1263230a65f0675a5aa8e91f22deeecd 96 SUPERFAMILY SSF46626 23 93 1.77E-10 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_0972 1263230a65f0675a5aa8e91f22deeecd 96 Gene3D G3DSA:1.10.760.10 19 95 9.6E-15 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_0972 1263230a65f0675a5aa8e91f22deeecd 96 Pfam PF00034 Cytochrome c 23 94 2.9E-4 T 18-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_2625 c373f9674113a46a2d9d4273350094f2 689 Gene3D G3DSA:1.10.1130.10 133 169 9.2E-6 T 18-10-2018 SHALO_2625 c373f9674113a46a2d9d4273350094f2 689 SUPERFAMILY SSF48695 135 685 2.6E-48 T 18-10-2018 IPR036280 Multiheme cytochrome superfamily SHALO_2625 c373f9674113a46a2d9d4273350094f2 689 Gene3D G3DSA:1.10.1130.10 389 542 2.0E-5 T 18-10-2018 SHALO_2625 c373f9674113a46a2d9d4273350094f2 689 Gene3D G3DSA:3.90.10.10 279 365 4.3E-5 T 18-10-2018 SHALO_2625 c373f9674113a46a2d9d4273350094f2 689 Hamap MF_02023 Dissimilatory sulfite reductase. 2 688 50.647 T 18-10-2018 IPR032897 Dissimilatory sulfite reductase GO:0016002|GO:0020037|GO:0070814 SHALO_0020 ab1ff0510487787aa220d688b79c2147 209 SUPERFAMILY SSF81901 27 203 4.19E-49 T 18-10-2018 SHALO_0020 ab1ff0510487787aa220d688b79c2147 209 SMART SM00671 88 123 4.5E-10 T 18-10-2018 IPR006597 Sel1-like repeat SHALO_0020 ab1ff0510487787aa220d688b79c2147 209 SMART SM00671 160 195 1.5E-10 T 18-10-2018 IPR006597 Sel1-like repeat SHALO_0020 ab1ff0510487787aa220d688b79c2147 209 SMART SM00671 124 159 6.6E-8 T 18-10-2018 IPR006597 Sel1-like repeat SHALO_0020 ab1ff0510487787aa220d688b79c2147 209 SMART SM00671 52 87 7.4E-12 T 18-10-2018 IPR006597 Sel1-like repeat SHALO_0020 ab1ff0510487787aa220d688b79c2147 209 Gene3D G3DSA:1.25.40.10 22 207 1.1E-60 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SHALO_0020 ab1ff0510487787aa220d688b79c2147 209 Pfam PF08238 Sel1 repeat 161 194 4.0E-8 T 18-10-2018 IPR006597 Sel1-like repeat SHALO_0020 ab1ff0510487787aa220d688b79c2147 209 Pfam PF08238 Sel1 repeat 126 159 1.5E-4 T 18-10-2018 IPR006597 Sel1-like repeat SHALO_0020 ab1ff0510487787aa220d688b79c2147 209 Pfam PF08238 Sel1 repeat 90 123 2.0E-7 T 18-10-2018 IPR006597 Sel1-like repeat SHALO_0020 ab1ff0510487787aa220d688b79c2147 209 Pfam PF08238 Sel1 repeat 52 86 1.2E-8 T 18-10-2018 IPR006597 Sel1-like repeat SHALO_1474 046e890ff346ab7cf4e126b18b722122 143 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 12 128 8.1E-23 T 18-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 SHALO_1474 046e890ff346ab7cf4e126b18b722122 143 Gene3D G3DSA:3.40.50.300 3 142 3.9E-25 T 18-10-2018 SHALO_1474 046e890ff346ab7cf4e126b18b722122 143 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 10 116 1.2E-24 T 18-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 SHALO_1474 046e890ff346ab7cf4e126b18b722122 143 SUPERFAMILY SSF52540 28 106 5.32E-7 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_2241 b95f596ea95e76b193efcf23c87f67c0 367 Gene3D G3DSA:3.40.50.2000 1 172 3.9E-27 T 18-10-2018 SHALO_2241 b95f596ea95e76b193efcf23c87f67c0 367 Gene3D G3DSA:3.40.50.2000 173 346 1.9E-33 T 18-10-2018 SHALO_2241 b95f596ea95e76b193efcf23c87f67c0 367 Pfam PF13439 Glycosyltransferase Family 4 13 161 2.2E-27 T 18-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 SHALO_2241 b95f596ea95e76b193efcf23c87f67c0 367 Pfam PF00534 Glycosyl transferases group 1 180 334 3.4E-28 T 18-10-2018 IPR001296 Glycosyl transferase, family 1 SHALO_2241 b95f596ea95e76b193efcf23c87f67c0 367 SUPERFAMILY SSF53756 3 361 1.06E-72 T 18-10-2018 SHALO_0118 a1766c5f06e660ca42ebfafff79841a5 91 SUPERFAMILY SSF46992 3 86 1.02E-26 T 18-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_0118 a1766c5f06e660ca42ebfafff79841a5 91 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 15.751 T 18-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_0118 a1766c5f06e660ca42ebfafff79841a5 91 Gene3D G3DSA:1.20.58.110 1 87 1.3E-25 T 18-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_0118 a1766c5f06e660ca42ebfafff79841a5 91 Pfam PF01649 Ribosomal protein S20 2 84 8.8E-25 T 18-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_0118 a1766c5f06e660ca42ebfafff79841a5 91 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 85 1.4E-26 T 18-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_0118 a1766c5f06e660ca42ebfafff79841a5 91 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 12 88 2.0E-19 T 18-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_2663 147faa4bfcb4a77148fd05626f916eb4 338 Pfam PF01497 Periplasmic binding protein 89 276 1.0E-17 T 18-10-2018 IPR002491 ABC transporter periplasmic binding domain SHALO_2663 147faa4bfcb4a77148fd05626f916eb4 338 Gene3D G3DSA:3.40.50.1980 16 151 1.8E-38 T 18-10-2018 SHALO_2663 147faa4bfcb4a77148fd05626f916eb4 338 Gene3D G3DSA:1.20.58.2180 157 329 7.7E-53 T 18-10-2018 SHALO_2663 147faa4bfcb4a77148fd05626f916eb4 338 SUPERFAMILY SSF53807 18 302 8.24E-40 T 18-10-2018 SHALO_2663 147faa4bfcb4a77148fd05626f916eb4 338 Gene3D G3DSA:3.40.50.1980 180 283 7.7E-53 T 18-10-2018 SHALO_2630 105840ddb17d26c0bdbe624ac336e7b3 116 SUPERFAMILY SSF46785 19 112 1.19E-27 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SHALO_2630 105840ddb17d26c0bdbe624ac336e7b3 116 Pfam PF01638 HxlR-like helix-turn-helix 26 115 1.3E-26 T 18-10-2018 IPR002577 Helix-turn-helix, HxlR type SHALO_2630 105840ddb17d26c0bdbe624ac336e7b3 116 Gene3D G3DSA:1.10.10.10 17 115 4.2E-30 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_0805 7141562e7d91d26b11843e4196e155a5 445 Gene3D G3DSA:1.20.1600.10 18 445 4.1E-53 T 18-10-2018 SHALO_0805 7141562e7d91d26b11843e4196e155a5 445 SUPERFAMILY SSF56954 3 439 1.06E-51 T 18-10-2018 SHALO_0805 7141562e7d91d26b11843e4196e155a5 445 Pfam PF02321 Outer membrane efflux protein 261 439 1.2E-21 T 18-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 SHALO_0805 7141562e7d91d26b11843e4196e155a5 445 Pfam PF02321 Outer membrane efflux protein 22 232 5.1E-9 T 18-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 SHALO_2534 e92bbcd77a2668c753b48c243dd0656c 595 SUPERFAMILY SSF90123 29 497 1.44E-31 T 18-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 SHALO_2534 e92bbcd77a2668c753b48c243dd0656c 595 Gene3D G3DSA:1.20.1560.10 25 328 2.2E-26 T 18-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 SHALO_2534 e92bbcd77a2668c753b48c243dd0656c 595 Pfam PF00005 ABC transporter 363 512 5.3E-31 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_2534 e92bbcd77a2668c753b48c243dd0656c 595 SUPERFAMILY SSF52540 340 582 3.91E-85 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_2534 e92bbcd77a2668c753b48c243dd0656c 595 SMART SM00382 372 558 2.4E-14 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_2534 e92bbcd77a2668c753b48c243dd0656c 595 ProSitePatterns PS00211 ABC transporters family signature. 484 498 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_2534 e92bbcd77a2668c753b48c243dd0656c 595 Pfam PF00664 ABC transporter transmembrane region 68 302 2.4E-12 T 18-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 SHALO_2534 e92bbcd77a2668c753b48c243dd0656c 595 Gene3D G3DSA:3.40.50.300 333 585 2.8E-84 T 18-10-2018 SHALO_2013 35ad496003f538f62b401ecf7747fff6 276 Gene3D G3DSA:3.30.2350.10 2 223 4.6E-58 T 18-10-2018 SHALO_2013 35ad496003f538f62b401ecf7747fff6 276 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 25 172 2.9E-42 T 18-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 SHALO_2013 35ad496003f538f62b401ecf7747fff6 276 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 3 261 12.48 T 18-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHALO_2013 35ad496003f538f62b401ecf7747fff6 276 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 7 209 5.0E-48 T 18-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHALO_2013 35ad496003f538f62b401ecf7747fff6 276 SUPERFAMILY SSF55120 4 216 3.2E-59 T 18-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHALO_0285 0bd279ac1adf489bcc5cd143c4203549 352 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 205 223 1.3E-42 T 18-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 SHALO_0285 0bd279ac1adf489bcc5cd143c4203549 352 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 299 320 1.3E-42 T 18-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 SHALO_0285 0bd279ac1adf489bcc5cd143c4203549 352 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 269 284 1.3E-42 T 18-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 SHALO_0285 0bd279ac1adf489bcc5cd143c4203549 352 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 225 242 1.3E-42 T 18-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 SHALO_0285 0bd279ac1adf489bcc5cd143c4203549 352 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 8 30 1.3E-42 T 18-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 SHALO_0285 0bd279ac1adf489bcc5cd143c4203549 352 Pfam PF01312 FlhB HrpN YscU SpaS Family 5 344 2.7E-122 T 18-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 SHALO_0285 0bd279ac1adf489bcc5cd143c4203549 352 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 5 350 4.4E-129 T 18-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 SHALO_0285 0bd279ac1adf489bcc5cd143c4203549 352 SUPERFAMILY SSF160544 241 347 1.24E-41 T 18-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal SHALO_0285 0bd279ac1adf489bcc5cd143c4203549 352 Gene3D G3DSA:3.40.1690.10 214 352 4.1E-58 T 18-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal SHALO_0537 e24fff49ff03f373a3086180954977b8 392 Pfam PF07690 Major Facilitator Superfamily 19 348 2.1E-33 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SHALO_0537 e24fff49ff03f373a3086180954977b8 392 Gene3D G3DSA:1.20.1250.20 13 385 5.6E-41 T 18-10-2018 SHALO_0537 e24fff49ff03f373a3086180954977b8 392 SUPERFAMILY SSF103473 7 385 1.96E-49 T 18-10-2018 IPR036259 MFS transporter superfamily SHALO_1723 04a9f476ded8c6aaa0e281e4e93d7b97 236 Pfam PF13649 Methyltransferase domain 55 150 9.8E-14 T 18-10-2018 SHALO_1723 04a9f476ded8c6aaa0e281e4e93d7b97 236 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 2 234 9.6E-78 T 18-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 SHALO_1723 04a9f476ded8c6aaa0e281e4e93d7b97 236 Hamap MF_01589 Carboxy-S-adenosyl-L-methionine synthase [cmoA]. 1 234 37.631 T 18-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 SHALO_1723 04a9f476ded8c6aaa0e281e4e93d7b97 236 PIRSF PIRSF006325 1 235 9.7E-86 T 18-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 SHALO_1723 04a9f476ded8c6aaa0e281e4e93d7b97 236 Gene3D G3DSA:3.40.50.150 15 234 7.3E-60 T 18-10-2018 SHALO_1723 04a9f476ded8c6aaa0e281e4e93d7b97 236 SUPERFAMILY SSF53335 14 234 1.08E-37 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_0018 4596ba0fa85fc56b9dfa422038574e11 169 Hamap MF_01032 Methanogen homoaconitase small subunit [hacB]. 5 164 34.057 T 18-10-2018 IPR011827 Hydrolyase LeuD/HacB/DmdB GO:0016836 KEGG: 00290+4.2.1.33 SHALO_0018 4596ba0fa85fc56b9dfa422038574e11 169 TIGRFAM TIGR02087 LEUD_arch: 3-isopropylmalate dehydratase, small subunit 7 161 4.6E-57 T 18-10-2018 IPR011827 Hydrolyase LeuD/HacB/DmdB GO:0016836 KEGG: 00290+4.2.1.33 SHALO_0018 4596ba0fa85fc56b9dfa422038574e11 169 Gene3D G3DSA:3.20.19.10 1 168 8.2E-54 T 18-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 SHALO_0018 4596ba0fa85fc56b9dfa422038574e11 169 Pfam PF00694 Aconitase C-terminal domain 24 102 1.2E-20 T 18-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 SHALO_0018 4596ba0fa85fc56b9dfa422038574e11 169 SUPERFAMILY SSF52016 3 166 1.55E-45 T 18-10-2018 SHALO_2161 c7c3657e9972815392456144471de2c2 237 Pfam PF13531 Bacterial extracellular solute-binding protein 21 236 1.1E-22 T 18-10-2018 SHALO_2161 c7c3657e9972815392456144471de2c2 237 Gene3D G3DSA:3.40.190.10 95 199 1.7E-32 T 18-10-2018 SHALO_2161 c7c3657e9972815392456144471de2c2 237 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 30 236 2.7E-28 T 18-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 SHALO_2161 c7c3657e9972815392456144471de2c2 237 SUPERFAMILY SSF53850 19 236 1.13E-37 T 18-10-2018 SHALO_2161 c7c3657e9972815392456144471de2c2 237 Gene3D G3DSA:3.40.190.10 25 236 1.7E-32 T 18-10-2018 SHALO_2098 79c611cebce7737befa54fac8349cd01 528 Gene3D G3DSA:3.30.565.10 371 521 9.3E-22 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_2098 79c611cebce7737befa54fac8349cd01 528 SMART SM00387 417 525 3.9E-18 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_2098 79c611cebce7737befa54fac8349cd01 528 Gene3D G3DSA:3.30.450.20 206 310 2.6E-13 T 18-10-2018 SHALO_2098 79c611cebce7737befa54fac8349cd01 528 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 322 363 1.1E-7 T 18-10-2018 IPR039506 SpoOB, alpha-helical domain SHALO_2098 79c611cebce7737befa54fac8349cd01 528 SUPERFAMILY SSF55874 382 523 1.31E-21 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_2098 79c611cebce7737befa54fac8349cd01 528 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 419 523 1.2E-13 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_2098 79c611cebce7737befa54fac8349cd01 528 SUPERFAMILY SSF103190 44 175 1.06E-35 T 18-10-2018 IPR029151 Periplasmic sensor-like domain superfamily SHALO_2098 79c611cebce7737befa54fac8349cd01 528 Gene3D G3DSA:3.30.450.20 38 171 2.4E-42 T 18-10-2018 SHALO_2098 79c611cebce7737befa54fac8349cd01 528 PRINTS PR00344 Bacterial sensor protein C-terminal signature 456 470 7.8E-7 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_2098 79c611cebce7737befa54fac8349cd01 528 PRINTS PR00344 Bacterial sensor protein C-terminal signature 474 484 7.8E-7 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_2098 79c611cebce7737befa54fac8349cd01 528 PRINTS PR00344 Bacterial sensor protein C-terminal signature 509 522 7.8E-7 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_2098 79c611cebce7737befa54fac8349cd01 528 PRINTS PR00344 Bacterial sensor protein C-terminal signature 486 504 7.8E-7 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_2098 79c611cebce7737befa54fac8349cd01 528 SUPERFAMILY SSF55890 320 394 2.48E-10 T 18-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 SHALO_2098 79c611cebce7737befa54fac8349cd01 528 Pfam PF17203 Single cache domain 3 44 176 8.7E-22 T 18-10-2018 IPR033463 Single cache domain 3 SHALO_1810 a55f25e9f6f87b9ea3f8cf8ccaaeaeaf 377 Gene3D G3DSA:3.90.1150.10 12 370 9.6E-129 T 18-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 SHALO_1810 a55f25e9f6f87b9ea3f8cf8ccaaeaeaf 377 Pfam PF00155 Aminotransferase class I and II 37 369 4.6E-35 T 18-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SHALO_1810 a55f25e9f6f87b9ea3f8cf8ccaaeaeaf 377 Gene3D G3DSA:3.40.640.10 63 284 9.6E-129 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 SHALO_1810 a55f25e9f6f87b9ea3f8cf8ccaaeaeaf 377 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 4 374 4.9E-131 T 18-10-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 SHALO_1810 a55f25e9f6f87b9ea3f8cf8ccaaeaeaf 377 SUPERFAMILY SSF53383 1 376 1.29E-87 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase SHALO_1241 cea15eea6f9ffc8c0498649c20f7a466 199 Gene3D G3DSA:3.30.1330.60 61 199 2.9E-27 T 18-10-2018 IPR036737 OmpA-like domain superfamily SHALO_1241 cea15eea6f9ffc8c0498649c20f7a466 199 SUPERFAMILY SSF103088 92 198 1.7E-26 T 18-10-2018 IPR036737 OmpA-like domain superfamily SHALO_1241 cea15eea6f9ffc8c0498649c20f7a466 199 Pfam PF00691 OmpA family 97 192 5.7E-17 T 18-10-2018 IPR006665 OmpA-like domain SHALO_1241 cea15eea6f9ffc8c0498649c20f7a466 199 PRINTS PR01021 OMPA domain signature 143 159 3.2E-10 T 18-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SHALO_1241 cea15eea6f9ffc8c0498649c20f7a466 199 PRINTS PR01021 OMPA domain signature 98 120 3.2E-10 T 18-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SHALO_1241 cea15eea6f9ffc8c0498649c20f7a466 199 PRINTS PR01021 OMPA domain signature 128 143 3.2E-10 T 18-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SHALO_2351 4e0661edc44f9bc9577c4608275c6e10 117 Gene3D G3DSA:1.10.10.10 4 114 1.1E-28 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_2351 4e0661edc44f9bc9577c4608275c6e10 117 Pfam PF01638 HxlR-like helix-turn-helix 19 105 3.6E-24 T 18-10-2018 IPR002577 Helix-turn-helix, HxlR type SHALO_2351 4e0661edc44f9bc9577c4608275c6e10 117 SUPERFAMILY SSF46785 2 107 1.84E-26 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SHALO_1730 2bfc900fe201cf087885debdbca63476 381 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 121 375 5.0E-86 T 18-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 SHALO_1730 2bfc900fe201cf087885debdbca63476 381 Gene3D G3DSA:3.20.20.20 100 380 2.2E-86 T 18-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 SHALO_1730 2bfc900fe201cf087885debdbca63476 381 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 154 167 - T 18-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 SHALO_1730 2bfc900fe201cf087885debdbca63476 381 Pfam PF00809 Pterin binding enzyme 122 361 2.1E-68 T 18-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 SHALO_1730 2bfc900fe201cf087885debdbca63476 381 SUPERFAMILY SSF51717 113 378 2.88E-86 T 18-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 SHALO_1730 2bfc900fe201cf087885debdbca63476 381 PIRSF PIRSF000501 1 381 2.0E-145 T 18-10-2018 IPR016227 Dihydropteroate synthase, predicted KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 SHALO_1327 39919c3ce469b122a946604ccdcd057a 267 TIGRFAM TIGR00694 thiM: hydroxyethylthiazole kinase 13 254 5.9E-82 T 18-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 SHALO_1327 39919c3ce469b122a946604ccdcd057a 267 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 19 26 8.3E-38 T 18-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 SHALO_1327 39919c3ce469b122a946604ccdcd057a 267 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 120 134 8.3E-38 T 18-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 SHALO_1327 39919c3ce469b122a946604ccdcd057a 267 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 89 106 8.3E-38 T 18-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 SHALO_1327 39919c3ce469b122a946604ccdcd057a 267 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 164 181 8.3E-38 T 18-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 SHALO_1327 39919c3ce469b122a946604ccdcd057a 267 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 32 53 8.3E-38 T 18-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 SHALO_1327 39919c3ce469b122a946604ccdcd057a 267 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 63 71 8.3E-38 T 18-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 SHALO_1327 39919c3ce469b122a946604ccdcd057a 267 SUPERFAMILY SSF53613 11 257 3.45E-53 T 18-10-2018 IPR029056 Ribokinase-like SHALO_1327 39919c3ce469b122a946604ccdcd057a 267 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 13 258 31.228 T 18-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 SHALO_1327 39919c3ce469b122a946604ccdcd057a 267 PIRSF PIRSF000513 5 266 1.0E-84 T 18-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 SHALO_1327 39919c3ce469b122a946604ccdcd057a 267 Pfam PF02110 Hydroxyethylthiazole kinase family 13 253 5.5E-80 T 18-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 SHALO_1327 39919c3ce469b122a946604ccdcd057a 267 Gene3D G3DSA:3.40.1190.20 2 266 1.2E-94 T 18-10-2018 IPR029056 Ribokinase-like SHALO_2020 963398a65fd335472290c0276f904f3d 290 Gene3D G3DSA:3.40.50.1370 127 275 6.1E-95 T 18-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 SHALO_2020 963398a65fd335472290c0276f904f3d 290 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 146 285 2.4E-24 T 18-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 SHALO_2020 963398a65fd335472290c0276f904f3d 290 Gene3D G3DSA:3.40.50.1370 3 285 6.1E-95 T 18-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 SHALO_2020 963398a65fd335472290c0276f904f3d 290 SUPERFAMILY SSF53671 2 289 3.93E-94 T 18-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 SHALO_2020 963398a65fd335472290c0276f904f3d 290 PRINTS PR00101 Aspartate carbamoyltransferase signature 71 80 1.2E-31 T 18-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 SHALO_2020 963398a65fd335472290c0276f904f3d 290 PRINTS PR00101 Aspartate carbamoyltransferase signature 245 250 1.2E-31 T 18-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 SHALO_2020 963398a65fd335472290c0276f904f3d 290 PRINTS PR00101 Aspartate carbamoyltransferase signature 126 143 1.2E-31 T 18-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 SHALO_2020 963398a65fd335472290c0276f904f3d 290 PRINTS PR00101 Aspartate carbamoyltransferase signature 206 215 1.2E-31 T 18-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 SHALO_2020 963398a65fd335472290c0276f904f3d 290 PRINTS PR00101 Aspartate carbamoyltransferase signature 269 283 1.2E-31 T 18-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 SHALO_2020 963398a65fd335472290c0276f904f3d 290 PRINTS PR00101 Aspartate carbamoyltransferase signature 33 55 1.2E-31 T 18-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 SHALO_2020 963398a65fd335472290c0276f904f3d 290 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 3 139 3.9E-45 T 18-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 SHALO_2020 963398a65fd335472290c0276f904f3d 290 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 43 50 - T 18-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SHALO_2020 963398a65fd335472290c0276f904f3d 290 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 1 290 39.557 T 18-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 SHALO_2020 963398a65fd335472290c0276f904f3d 290 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 241 250 2.0E-20 T 18-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SHALO_2020 963398a65fd335472290c0276f904f3d 290 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 43 62 2.0E-20 T 18-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SHALO_2020 963398a65fd335472290c0276f904f3d 290 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 127 138 2.0E-20 T 18-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SHALO_2020 963398a65fd335472290c0276f904f3d 290 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 253 276 2.0E-20 T 18-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SHALO_2020 963398a65fd335472290c0276f904f3d 290 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 2 288 3.0E-100 T 18-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 SHALO_1618 c8614c2bb49a082505e0dc6ced56b525 175 SUPERFAMILY SSF52507 2 174 5.36E-53 T 18-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 SHALO_1618 c8614c2bb49a082505e0dc6ced56b525 175 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 3 172 4.5E-49 T 18-10-2018 IPR004507 Flavin prenyltransferase UbiX-like SHALO_1618 c8614c2bb49a082505e0dc6ced56b525 175 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 2 174 30.899 T 18-10-2018 IPR004507 Flavin prenyltransferase UbiX-like SHALO_1618 c8614c2bb49a082505e0dc6ced56b525 175 Gene3D G3DSA:3.40.50.1950 2 175 6.0E-62 T 18-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 SHALO_1618 c8614c2bb49a082505e0dc6ced56b525 175 Pfam PF02441 Flavoprotein 2 153 4.3E-24 T 18-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 SHALO_0202 707d5518d9c608e8f963113011fd2be8 482 Gene3D G3DSA:1.10.287.950 138 387 3.0E-49 T 18-10-2018 SHALO_0202 707d5518d9c608e8f963113011fd2be8 482 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 227 357 2.1E-33 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_0202 707d5518d9c608e8f963113011fd2be8 482 Pfam PF13682 Chemoreceptor zinc-binding domain 368 429 9.1E-12 T 18-10-2018 IPR025991 Chemoreceptor zinc-binding domain SHALO_0202 707d5518d9c608e8f963113011fd2be8 482 SUPERFAMILY SSF58104 83 382 1.57E-52 T 18-10-2018 SHALO_0202 707d5518d9c608e8f963113011fd2be8 482 SMART SM00283 155 404 2.3E-33 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_0288 3b8cc5ce954b9c12efbfbbfb34d9dd9c 197 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 102 147 1.6E-8 T 18-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 SHALO_0288 3b8cc5ce954b9c12efbfbbfb34d9dd9c 197 Gene3D G3DSA:2.160.20.70 81 195 2.7E-9 T 18-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 SHALO_0288 3b8cc5ce954b9c12efbfbbfb34d9dd9c 197 SUPERFAMILY SSF63848 99 195 2.22E-11 T 18-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 SHALO_0857 23c99ce9232e07de95a951adee122bb2 582 SUPERFAMILY SSF55681 112 579 4.02E-106 T 18-10-2018 SHALO_0857 23c99ce9232e07de95a951adee122bb2 582 Gene3D G3DSA:2.40.50.140 1 106 1.1E-28 T 18-10-2018 SHALO_0857 23c99ce9232e07de95a951adee122bb2 582 Gene3D G3DSA:3.30.930.10 118 575 7.7E-187 T 18-10-2018 SHALO_0857 23c99ce9232e07de95a951adee122bb2 582 Pfam PF00152 tRNA synthetases class II (D, K and N) 120 552 3.6E-113 T 18-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_0857 23c99ce9232e07de95a951adee122bb2 582 Gene3D G3DSA:3.30.1360.30 273 419 7.7E-187 T 18-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 SHALO_0857 23c99ce9232e07de95a951adee122bb2 582 SUPERFAMILY SSF55261 290 419 1.19E-33 T 18-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 SHALO_0857 23c99ce9232e07de95a951adee122bb2 582 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 578 32.568 T 18-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 SHALO_0857 23c99ce9232e07de95a951adee122bb2 582 Pfam PF01336 OB-fold nucleic acid binding domain 18 100 4.5E-14 T 18-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 SHALO_0857 23c99ce9232e07de95a951adee122bb2 582 SUPERFAMILY SSF50249 1 106 8.57E-27 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold SHALO_0857 23c99ce9232e07de95a951adee122bb2 582 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 2 576 8.6E-239 T 18-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 SHALO_0857 23c99ce9232e07de95a951adee122bb2 582 PRINTS PR01042 Aspartyl-tRNA synthetase signature 512 526 3.1E-26 T 18-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_0857 23c99ce9232e07de95a951adee122bb2 582 PRINTS PR01042 Aspartyl-tRNA synthetase signature 468 484 3.1E-26 T 18-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_0857 23c99ce9232e07de95a951adee122bb2 582 PRINTS PR01042 Aspartyl-tRNA synthetase signature 192 204 3.1E-26 T 18-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_0857 23c99ce9232e07de95a951adee122bb2 582 PRINTS PR01042 Aspartyl-tRNA synthetase signature 209 222 3.1E-26 T 18-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_0857 23c99ce9232e07de95a951adee122bb2 582 Pfam PF02938 GAD domain 309 405 4.2E-22 T 18-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 SHALO_1037 19253748bc002f8bca245626b5d64591 442 Gene3D G3DSA:1.20.1600.10 22 425 1.4E-65 T 18-10-2018 SHALO_1037 19253748bc002f8bca245626b5d64591 442 SUPERFAMILY SSF56954 5 419 1.27E-62 T 18-10-2018 SHALO_1037 19253748bc002f8bca245626b5d64591 442 Pfam PF02321 Outer membrane efflux protein 29 210 4.9E-18 T 18-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 SHALO_1037 19253748bc002f8bca245626b5d64591 442 Pfam PF02321 Outer membrane efflux protein 238 413 5.9E-19 T 18-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 SHALO_1037 19253748bc002f8bca245626b5d64591 442 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 20 422 1.3E-70 T 18-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 SHALO_1780 fe78ed99a10579d458cef0bf48b53206 175 Pfam PF00857 Isochorismatase family 3 144 1.4E-33 T 18-10-2018 IPR000868 Isochorismatase-like GO:0003824 SHALO_1780 fe78ed99a10579d458cef0bf48b53206 175 SUPERFAMILY SSF52499 3 157 1.1E-40 T 18-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 SHALO_1780 fe78ed99a10579d458cef0bf48b53206 175 Gene3D G3DSA:3.40.50.850 1 159 2.9E-42 T 18-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 SHALO_0372 0e5a1b9afe7b02988f99a31bde1e730a 283 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 13 220 8.0E-59 T 18-10-2018 IPR003740 Uncharacterised membrane protein YitT SHALO_0372 0e5a1b9afe7b02988f99a31bde1e730a 283 PIRSF PIRSF006483 2 283 2.7E-67 T 18-10-2018 IPR003740 Uncharacterised membrane protein YitT SHALO_0372 0e5a1b9afe7b02988f99a31bde1e730a 283 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 229 281 4.1E-11 T 18-10-2018 IPR019264 Domain of unknown function DUF2179 SHALO_0372 0e5a1b9afe7b02988f99a31bde1e730a 283 Gene3D G3DSA:3.30.70.120 198 274 1.1E-10 T 18-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal SHALO_0520 6ad2c83ccabe4deb73bd890b13e9d17c 74 Pfam PF02069 Prokaryotic metallothionein 44 72 6.7E-7 T 18-10-2018 IPR000518 Metallothionein, family 14, prokaryote GO:0046872 SHALO_0520 6ad2c83ccabe4deb73bd890b13e9d17c 74 SUPERFAMILY SSF57868 44 71 2.24E-5 T 18-10-2018 IPR017854 Metallothionein domain superfamily GO:0046872 SHALO_0520 6ad2c83ccabe4deb73bd890b13e9d17c 74 Gene3D G3DSA:2.30.170.10 40 73 1.6E-6 T 18-10-2018 SHALO_1500 58cc96f9367c790b5e7a742405106492 493 SUPERFAMILY SSF54862 347 422 8.38E-11 T 18-10-2018 SHALO_1500 58cc96f9367c790b5e7a742405106492 493 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 358 369 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_1500 58cc96f9367c790b5e7a742405106492 493 TIGRFAM TIGR02486 RDH: reductive dehalogenase 168 456 3.7E-86 T 18-10-2018 IPR012832 Reductive dehalogenase SHALO_1500 58cc96f9367c790b5e7a742405106492 493 Pfam PF13486 Reductive dehalogenase subunit 177 344 1.8E-31 T 18-10-2018 IPR028894 Reductive dehalogenase domain SHALO_1500 58cc96f9367c790b5e7a742405106492 493 Pfam PF13484 4Fe-4S double cluster binding domain 357 421 1.9E-11 T 18-10-2018 SHALO_1500 58cc96f9367c790b5e7a742405106492 493 Gene3D G3DSA:3.30.70.20 352 423 2.6E-8 T 18-10-2018 SHALO_2745 e010464a527a741caa24510cad709410 429 SUPERFAMILY SSF55874 304 424 3.67E-17 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_2745 e010464a527a741caa24510cad709410 429 SMART SM00387 324 425 1.3E-9 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_2745 e010464a527a741caa24510cad709410 429 Gene3D G3DSA:1.10.287.130 169 274 8.9E-11 T 18-10-2018 SHALO_2745 e010464a527a741caa24510cad709410 429 Gene3D G3DSA:3.30.565.10 292 425 2.1E-13 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_2745 e010464a527a741caa24510cad709410 429 SUPERFAMILY SSF47384 207 273 1.08E-5 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SHALO_2745 e010464a527a741caa24510cad709410 429 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 331 421 4.5E-9 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_1364 adc17370228bcdd82f3683c78cebb3df 191 Pfam PF03602 Conserved hypothetical protein 95 10 190 1.7E-37 T 18-10-2018 SHALO_1364 adc17370228bcdd82f3683c78cebb3df 191 SUPERFAMILY SSF53335 10 190 3.5E-28 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_1364 adc17370228bcdd82f3683c78cebb3df 191 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 9 190 1.0E-39 T 18-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 SHALO_1364 adc17370228bcdd82f3683c78cebb3df 191 Gene3D G3DSA:3.40.50.150 4 191 3.0E-33 T 18-10-2018 SHALO_1364 adc17370228bcdd82f3683c78cebb3df 191 PIRSF PIRSF004553 7 191 7.3E-37 T 18-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 SHALO_2030 e54f3149b9e1062b349412818be95047 230 Gene3D G3DSA:1.10.1270.20 173 230 1.1E-14 T 18-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SHALO_2030 e54f3149b9e1062b349412818be95047 230 PIRSF PIRSF000386 1 230 1.5E-80 T 18-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SHALO_2030 e54f3149b9e1062b349412818be95047 230 SUPERFAMILY SSF75217 1 227 1.31E-78 T 18-10-2018 IPR029028 Alpha/beta knot methyltransferases SHALO_2030 e54f3149b9e1062b349412818be95047 230 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 230 80.142 T 18-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SHALO_2030 e54f3149b9e1062b349412818be95047 230 Gene3D G3DSA:3.40.1280.10 1 172 5.1E-62 T 18-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SHALO_2030 e54f3149b9e1062b349412818be95047 230 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 220 1.2E-50 T 18-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SHALO_2030 e54f3149b9e1062b349412818be95047 230 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 228 5.3E-80 T 18-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SHALO_1488 968b1623a99854c084fe3b90a28d2197 154 SUPERFAMILY SSF48695 62 147 1.35E-13 T 18-10-2018 IPR036280 Multiheme cytochrome superfamily SHALO_1488 968b1623a99854c084fe3b90a28d2197 154 Pfam PF14537 Cytochrome c3 57 142 3.6E-15 T 18-10-2018 IPR012286 Tetrahaem cytochrome domain KEGG: 00020+1.3.5.4|KEGG: 00620+1.3.5.4|KEGG: 00650+1.3.5.4|KEGG: 00720+1.3.5.4|MetaCyc: PWY-5392|MetaCyc: PWY-5913|MetaCyc: PWY-7384 SHALO_1488 968b1623a99854c084fe3b90a28d2197 154 Gene3D G3DSA:1.10.1130.10 52 152 1.1E-17 T 18-10-2018 SHALO_0954 bc189f72a9a20fd7b55da0b4dd79d411 315 Gene3D G3DSA:2.130.10.10 15 239 9.4E-19 T 18-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 SHALO_0954 bc189f72a9a20fd7b55da0b4dd79d411 315 SMART SM00320 109 148 150.0 T 18-10-2018 IPR001680 WD40 repeat GO:0005515 SHALO_0954 bc189f72a9a20fd7b55da0b4dd79d411 315 SMART SM00320 275 313 0.0012 T 18-10-2018 IPR001680 WD40 repeat GO:0005515 SHALO_0954 bc189f72a9a20fd7b55da0b4dd79d411 315 SMART SM00320 193 231 10.0 T 18-10-2018 IPR001680 WD40 repeat GO:0005515 SHALO_0954 bc189f72a9a20fd7b55da0b4dd79d411 315 SMART SM00320 151 190 12.0 T 18-10-2018 IPR001680 WD40 repeat GO:0005515 SHALO_0954 bc189f72a9a20fd7b55da0b4dd79d411 315 SUPERFAMILY SSF50978 28 314 6.0E-27 T 18-10-2018 IPR036322 WD40-repeat-containing domain superfamily GO:0005515 SHALO_0954 bc189f72a9a20fd7b55da0b4dd79d411 315 Gene3D G3DSA:2.130.10.10 240 315 1.8E-7 T 18-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 SHALO_2171 5acf6680026b7487ae561de79e0bee6f 393 Gene3D G3DSA:2.40.420.20 49 373 4.6E-71 T 18-10-2018 SHALO_2171 5acf6680026b7487ae561de79e0bee6f 393 Gene3D G3DSA:1.10.287.470 99 176 4.6E-71 T 18-10-2018 SHALO_2171 5acf6680026b7487ae561de79e0bee6f 393 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 46 376 9.6E-50 T 18-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 SHALO_2171 5acf6680026b7487ae561de79e0bee6f 393 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 62 286 4.1E-22 T 18-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SHALO_2171 5acf6680026b7487ae561de79e0bee6f 393 SUPERFAMILY SSF111369 54 290 2.09E-26 T 18-10-2018 SHALO_2171 5acf6680026b7487ae561de79e0bee6f 393 Gene3D G3DSA:2.40.30.170 54 293 4.6E-71 T 18-10-2018 SHALO_2171 5acf6680026b7487ae561de79e0bee6f 393 Gene3D G3DSA:2.40.50.100 65 214 4.6E-71 T 18-10-2018 SHALO_2377 0c0cc8bc7a7756df3420558755b28f3b 130 Pfam PF00380 Ribosomal protein S9/S16 8 130 4.1E-41 T 18-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 SHALO_2377 0c0cc8bc7a7756df3420558755b28f3b 130 Gene3D G3DSA:3.30.230.10 1 130 3.5E-45 T 18-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SHALO_2377 0c0cc8bc7a7756df3420558755b28f3b 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 29.321 T 18-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid SHALO_2377 0c0cc8bc7a7756df3420558755b28f3b 130 SUPERFAMILY SSF54211 4 130 8.72E-41 T 18-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold SHALO_2377 0c0cc8bc7a7756df3420558755b28f3b 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 18-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 SHALO_2250 4b4769aa86d8559d2184af6e9f248ca9 98 SUPERFAMILY SSF46626 6 96 5.87E-15 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_2250 4b4769aa86d8559d2184af6e9f248ca9 98 Gene3D G3DSA:1.10.760.10 19 96 3.8E-15 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_2250 4b4769aa86d8559d2184af6e9f248ca9 98 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 18 91 1.5E-10 T 18-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_1437 7d2164969bbe56bd3b7c038c406588df 352 SMART SM00228 115 179 5.6E-8 T 18-10-2018 IPR001478 PDZ domain GO:0005515 SHALO_1437 7d2164969bbe56bd3b7c038c406588df 352 SUPERFAMILY SSF50156 83 188 6.05E-17 T 18-10-2018 IPR036034 PDZ superfamily GO:0005515 SHALO_1437 7d2164969bbe56bd3b7c038c406588df 352 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 125 176 2.3E-7 T 18-10-2018 IPR001478 PDZ domain GO:0005515 SHALO_1437 7d2164969bbe56bd3b7c038c406588df 352 Gene3D G3DSA:2.30.42.10 122 217 5.8E-17 T 18-10-2018 SHALO_1437 7d2164969bbe56bd3b7c038c406588df 352 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 123 349 3.8E-51 T 18-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 SHALO_1437 7d2164969bbe56bd3b7c038c406588df 352 Pfam PF02163 Peptidase family M50 7 336 6.6E-75 T 18-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 SHALO_2019 ba76dcc5cce10d7173792191155e5b02 320 SUPERFAMILY SSF56322 19 316 1.05E-69 T 18-10-2018 IPR005801 ADC synthase GO:0009058 SHALO_2019 ba76dcc5cce10d7173792191155e5b02 320 Pfam PF00425 chorismate binding enzyme 69 314 3.8E-62 T 18-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal SHALO_2019 ba76dcc5cce10d7173792191155e5b02 320 Gene3D G3DSA:3.60.120.10 15 319 2.1E-73 T 18-10-2018 IPR005801 ADC synthase GO:0009058 SHALO_2019 ba76dcc5cce10d7173792191155e5b02 320 PRINTS PR00095 Anthranilate synthase component I signature 173 186 5.8E-9 T 18-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 SHALO_2019 ba76dcc5cce10d7173792191155e5b02 320 PRINTS PR00095 Anthranilate synthase component I signature 159 172 5.8E-9 T 18-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 SHALO_2019 ba76dcc5cce10d7173792191155e5b02 320 PRINTS PR00095 Anthranilate synthase component I signature 271 285 5.8E-9 T 18-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 SHALO_2019 ba76dcc5cce10d7173792191155e5b02 320 PRINTS PR00095 Anthranilate synthase component I signature 257 271 5.8E-9 T 18-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 SHALO_0340 b9ca2097bf8477e37195c80536ffd5a5 245 SUPERFAMILY SSF52540 4 211 1.54E-50 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0340 b9ca2097bf8477e37195c80536ffd5a5 245 Pfam PF00005 ABC transporter 19 151 1.9E-24 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_0340 b9ca2097bf8477e37195c80536ffd5a5 245 Gene3D G3DSA:3.40.50.300 2 233 2.6E-53 T 18-10-2018 SHALO_0340 b9ca2097bf8477e37195c80536ffd5a5 245 ProSitePatterns PS00211 ABC transporters family signature. 124 138 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_0340 b9ca2097bf8477e37195c80536ffd5a5 245 SMART SM00382 28 200 1.5E-14 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_1632 1bb74ecea0d455555837d6c61bdb3335 395 Hamap MF_01074 Pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel insertion protein [larC]. 1 393 38.791 T 18-10-2018 IPR002822 Nickel insertion protein SHALO_1632 1bb74ecea0d455555837d6c61bdb3335 395 Pfam PF01969 Protein of unknown function DUF111 4 383 1.8E-140 T 18-10-2018 IPR002822 Nickel insertion protein SHALO_1632 1bb74ecea0d455555837d6c61bdb3335 395 Gene3D G3DSA:3.30.70.1380 242 333 1.4E-11 T 18-10-2018 SHALO_1632 1bb74ecea0d455555837d6c61bdb3335 395 TIGRFAM TIGR00299 TIGR00299: TIGR00299 family protein 3 383 9.1E-102 T 18-10-2018 IPR002822 Nickel insertion protein SHALO_2964 f7c5cda92af206e20f11b6e852a7016b 95 Pfam PF07876 Stress responsive A/B Barrel Domain 2 94 2.4E-25 T 18-10-2018 IPR013097 Stress responsive alpha-beta barrel SHALO_2964 f7c5cda92af206e20f11b6e852a7016b 95 Gene3D G3DSA:3.30.70.100 1 95 1.5E-24 T 18-10-2018 SHALO_2964 f7c5cda92af206e20f11b6e852a7016b 95 SMART SM00886 2 95 1.4E-30 T 18-10-2018 IPR013097 Stress responsive alpha-beta barrel SHALO_2964 f7c5cda92af206e20f11b6e852a7016b 95 SUPERFAMILY SSF54909 1 95 2.5E-23 T 18-10-2018 IPR011008 Dimeric alpha-beta barrel SHALO_2124 b9f2ff1f65766e2fa687c8af136b776d 231 Pfam PF02254 TrkA-N domain 6 120 8.0E-16 T 18-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SHALO_2124 b9f2ff1f65766e2fa687c8af136b776d 231 SUPERFAMILY SSF116726 146 227 5.1E-9 T 18-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 SHALO_2124 b9f2ff1f65766e2fa687c8af136b776d 231 SUPERFAMILY SSF51735 4 144 1.71E-20 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_2124 b9f2ff1f65766e2fa687c8af136b776d 231 Gene3D G3DSA:3.30.70.1450 154 228 1.0E-9 T 18-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 SHALO_2124 b9f2ff1f65766e2fa687c8af136b776d 231 Gene3D G3DSA:3.40.50.720 1 142 4.7E-21 T 18-10-2018 SHALO_0322 509c3ba7701ddb7fcca5c79372e030ab 249 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 32 47 - T 18-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 SHALO_0322 509c3ba7701ddb7fcca5c79372e030ab 249 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 21 248 2.1E-65 T 18-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 SHALO_0322 509c3ba7701ddb7fcca5c79372e030ab 249 Gene3D G3DSA:3.40.50.150 27 249 2.7E-46 T 18-10-2018 SHALO_0322 509c3ba7701ddb7fcca5c79372e030ab 249 Pfam PF01209 ubiE/COQ5 methyltransferase family 15 243 2.2E-40 T 18-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 SHALO_0322 509c3ba7701ddb7fcca5c79372e030ab 249 SUPERFAMILY SSF53335 19 243 9.29E-30 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_0322 509c3ba7701ddb7fcca5c79372e030ab 249 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 12 248 29.255 T 18-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 SHALO_0168 eb857d014b544a2febc6ed8bfde4b5c4 266 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 38 257 1.2E-61 T 18-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SHALO_0168 eb857d014b544a2febc6ed8bfde4b5c4 266 Gene3D G3DSA:3.40.190.10 122 218 4.0E-77 T 18-10-2018 SHALO_0168 eb857d014b544a2febc6ed8bfde4b5c4 266 Gene3D G3DSA:3.40.190.10 38 256 4.0E-77 T 18-10-2018 SHALO_0168 eb857d014b544a2febc6ed8bfde4b5c4 266 SMART SM00062 37 258 1.6E-63 T 18-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SHALO_0168 eb857d014b544a2febc6ed8bfde4b5c4 266 SUPERFAMILY SSF53850 2 257 1.2E-69 T 18-10-2018 SHALO_0168 eb857d014b544a2febc6ed8bfde4b5c4 266 SMART SM00079 37 258 1.1E-5 T 18-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 SHALO_0168 eb857d014b544a2febc6ed8bfde4b5c4 266 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 60 73 - T 18-10-2018 IPR018313 Solute-binding protein family 3, conserved site SHALO_2636 055eda3d1b12c52d8e18dcefa3d5464d 213 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 140 212 7.5E-16 T 18-10-2018 IPR037682 TonB, C-terminal GO:0055085 SHALO_2636 055eda3d1b12c52d8e18dcefa3d5464d 213 Gene3D G3DSA:3.30.1150.10 91 213 4.0E-19 T 18-10-2018 SHALO_2636 055eda3d1b12c52d8e18dcefa3d5464d 213 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 142 213 1.8E-11 T 18-10-2018 IPR006260 TonB/TolA, C-terminal SHALO_2636 055eda3d1b12c52d8e18dcefa3d5464d 213 SUPERFAMILY SSF74653 107 213 7.85E-15 T 18-10-2018 SHALO_0429 93f09ba6c1b8f2baa9f8390d4e4afe88 789 SUPERFAMILY SSF52540 1 783 5.79E-29 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0429 93f09ba6c1b8f2baa9f8390d4e4afe88 789 Gene3D G3DSA:3.40.50.300 1 265 7.7E-41 T 18-10-2018 SHALO_0429 93f09ba6c1b8f2baa9f8390d4e4afe88 789 Gene3D G3DSA:3.40.50.300 556 789 3.9E-29 T 18-10-2018 SHALO_0429 93f09ba6c1b8f2baa9f8390d4e4afe88 789 Pfam PF13476 AAA domain 5 254 1.4E-20 T 18-10-2018 IPR038729 Rad50/SbcC-type AAA domain SHALO_0429 93f09ba6c1b8f2baa9f8390d4e4afe88 789 SUPERFAMILY SSF75712 363 457 7.06E-5 T 18-10-2018 SHALO_2065 5d8d70e916a76070a9c5c244f51b0a99 593 Gene3D G3DSA:3.40.710.10 304 497 6.1E-79 T 18-10-2018 SHALO_2065 5d8d70e916a76070a9c5c244f51b0a99 593 Pfam PF03717 Penicillin-binding Protein dimerisation domain 49 209 2.7E-13 T 18-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 SHALO_2065 5d8d70e916a76070a9c5c244f51b0a99 593 SUPERFAMILY SSF56601 193 580 2.82E-68 T 18-10-2018 IPR012338 Beta-lactamase/transpeptidase-like SHALO_2065 5d8d70e916a76070a9c5c244f51b0a99 593 Gene3D G3DSA:3.30.450.330 247 576 6.1E-79 T 18-10-2018 SHALO_2065 5d8d70e916a76070a9c5c244f51b0a99 593 SUPERFAMILY SSF56519 49 242 3.79E-18 T 18-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 SHALO_2065 5d8d70e916a76070a9c5c244f51b0a99 593 Pfam PF00905 Penicillin binding protein transpeptidase domain 269 575 3.3E-61 T 18-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 SHALO_2065 5d8d70e916a76070a9c5c244f51b0a99 593 Gene3D G3DSA:3.90.1310.30 44 242 6.4E-16 T 18-10-2018 SHALO_1655 a5712efe803fe0de99d870c40a34d836 260 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 18-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SHALO_1655 a5712efe803fe0de99d870c40a34d836 260 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 255 3.7E-38 T 18-10-2018 SHALO_1655 a5712efe803fe0de99d870c40a34d836 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 4.8E-8 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_1655 a5712efe803fe0de99d870c40a34d836 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 4.8E-8 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_1655 a5712efe803fe0de99d870c40a34d836 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 4.8E-8 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_1655 a5712efe803fe0de99d870c40a34d836 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 4.2E-32 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_1655 a5712efe803fe0de99d870c40a34d836 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 4.2E-32 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_1655 a5712efe803fe0de99d870c40a34d836 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 4.2E-32 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_1655 a5712efe803fe0de99d870c40a34d836 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 4.2E-32 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_1655 a5712efe803fe0de99d870c40a34d836 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 4.2E-32 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_1655 a5712efe803fe0de99d870c40a34d836 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 4.2E-32 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_1655 a5712efe803fe0de99d870c40a34d836 260 SUPERFAMILY SSF51735 9 256 6.37E-59 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_1655 a5712efe803fe0de99d870c40a34d836 260 Gene3D G3DSA:3.40.50.720 3 260 1.5E-65 T 18-10-2018 SHALO_1600 7bfe082d037cddcd726b7fe26a12d046 301 SUPERFAMILY SSF53067 5 117 1.12E-18 T 18-10-2018 SHALO_1600 7bfe082d037cddcd726b7fe26a12d046 301 Gene3D G3DSA:3.30.420.40 3 118 3.2E-21 T 18-10-2018 SHALO_1600 7bfe082d037cddcd726b7fe26a12d046 301 Gene3D G3DSA:3.30.420.150 124 298 3.9E-35 T 18-10-2018 SHALO_1600 7bfe082d037cddcd726b7fe26a12d046 301 SUPERFAMILY SSF53067 126 296 8.55E-27 T 18-10-2018 SHALO_1600 7bfe082d037cddcd726b7fe26a12d046 301 Pfam PF02541 Ppx/GppA phosphatase family 24 294 2.3E-37 T 18-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 SHALO_0719 311e434dce8bac19dc957da954d7c717 445 Pfam PF00324 Amino acid permease 14 444 2.7E-110 T 18-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 SHALO_0719 311e434dce8bac19dc957da954d7c717 445 ProSitePatterns PS00218 Amino acid permeases signature. 39 69 - T 18-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 SHALO_0719 311e434dce8bac19dc957da954d7c717 445 Gene3D G3DSA:1.20.1740.10 7 445 9.8E-54 T 18-10-2018 SHALO_0719 311e434dce8bac19dc957da954d7c717 445 PIRSF PIRSF006060 1 445 1.6E-68 T 18-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 SHALO_2480 cdd92bc231009d4fff64fae201a6fd65 122 Gene3D G3DSA:1.10.760.10 16 120 5.3E-18 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_2480 cdd92bc231009d4fff64fae201a6fd65 122 SUPERFAMILY SSF46626 4 118 2.88E-17 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_2480 cdd92bc231009d4fff64fae201a6fd65 122 TIGRFAM TIGR04485 thiosulf_SoxX: sulfur oxidation c-type cytochrome SoxX 45 117 1.2E-17 T 18-10-2018 IPR030999 Sulfur oxidation c-type cytochrome SoxX SHALO_2480 cdd92bc231009d4fff64fae201a6fd65 122 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 32 117 1.5E-8 T 18-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_1930 9045fd94ebfc342d99e37e90495e924b 645 SMART SM00091 353 419 1.4E-7 T 18-10-2018 IPR000014 PAS domain SHALO_1930 9045fd94ebfc342d99e37e90495e924b 645 Pfam PF14827 Double sensory domain of two-component sensor kinase 103 183 3.0E-10 T 18-10-2018 IPR029150 Double Cache domain 3 SHALO_1930 9045fd94ebfc342d99e37e90495e924b 645 SUPERFAMILY SSF55785 365 475 1.77E-22 T 18-10-2018 IPR035965 PAS domain superfamily SHALO_1930 9045fd94ebfc342d99e37e90495e924b 645 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 475 643 6.0E-38 T 18-10-2018 IPR000160 GGDEF domain SHALO_1930 9045fd94ebfc342d99e37e90495e924b 645 Pfam PF13426 PAS domain 364 467 5.0E-17 T 18-10-2018 IPR000014 PAS domain SHALO_1930 9045fd94ebfc342d99e37e90495e924b 645 SUPERFAMILY SSF103190 80 189 7.3E-7 T 18-10-2018 IPR029151 Periplasmic sensor-like domain superfamily SHALO_1930 9045fd94ebfc342d99e37e90495e924b 645 SUPERFAMILY SSF55073 484 642 1.49E-38 T 18-10-2018 IPR029787 Nucleotide cyclase SHALO_1930 9045fd94ebfc342d99e37e90495e924b 645 Pfam PF00990 Diguanylate cyclase, GGDEF domain 479 640 3.7E-41 T 18-10-2018 IPR000160 GGDEF domain SHALO_1930 9045fd94ebfc342d99e37e90495e924b 645 Gene3D G3DSA:3.30.70.270 477 645 3.9E-50 T 18-10-2018 SHALO_1930 9045fd94ebfc342d99e37e90495e924b 645 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 353 473 9.7E-20 T 18-10-2018 IPR000014 PAS domain SHALO_1930 9045fd94ebfc342d99e37e90495e924b 645 SMART SM00267 468 645 3.5E-42 T 18-10-2018 IPR000160 GGDEF domain SHALO_1930 9045fd94ebfc342d99e37e90495e924b 645 Gene3D G3DSA:3.30.450.20 350 476 7.4E-25 T 18-10-2018 SHALO_1154 fb13860b5cbb08aa5f000c345bc380a5 429 Pfam PF00989 PAS fold 182 281 7.0E-13 T 18-10-2018 IPR013767 PAS fold GO:0006355 SHALO_1154 fb13860b5cbb08aa5f000c345bc380a5 429 SMART SM00091 169 237 1.0E-4 T 18-10-2018 IPR000014 PAS domain SHALO_1154 fb13860b5cbb08aa5f000c345bc380a5 429 Gene3D G3DSA:3.30.450.20 167 312 1.6E-27 T 18-10-2018 SHALO_1154 fb13860b5cbb08aa5f000c345bc380a5 429 Gene3D G3DSA:3.40.50.2300 7 152 4.0E-33 T 18-10-2018 SHALO_1154 fb13860b5cbb08aa5f000c345bc380a5 429 SUPERFAMILY SSF52172 14 180 4.7E-36 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_1154 fb13860b5cbb08aa5f000c345bc380a5 429 SMART SM00448 15 126 2.2E-31 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_1154 fb13860b5cbb08aa5f000c345bc380a5 429 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 170 290 4.9E-17 T 18-10-2018 IPR000014 PAS domain SHALO_1154 fb13860b5cbb08aa5f000c345bc380a5 429 Pfam PF00072 Response regulator receiver domain 17 126 2.0E-25 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_1154 fb13860b5cbb08aa5f000c345bc380a5 429 SUPERFAMILY SSF55785 183 281 1.74E-24 T 18-10-2018 IPR035965 PAS domain superfamily SHALO_1397 808dff0dcf3562aaecf17ef08e3756eb 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 57 2.1E-17 T 18-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SHALO_1397 808dff0dcf3562aaecf17ef08e3756eb 194 SUPERFAMILY SSF46689 6 79 2.29E-17 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SHALO_1397 808dff0dcf3562aaecf17ef08e3756eb 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 1.7E-9 T 18-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SHALO_1397 808dff0dcf3562aaecf17ef08e3756eb 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 1.7E-9 T 18-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SHALO_1397 808dff0dcf3562aaecf17ef08e3756eb 194 Gene3D G3DSA:1.10.357.10 4 194 1.0E-30 T 18-10-2018 SHALO_0574 d9c1ab4b2f9cd5c75e831fc818cc9d2d 273 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 250 6.3E-87 T 18-10-2018 SHALO_0574 d9c1ab4b2f9cd5c75e831fc818cc9d2d 273 PIRSF PIRSF000094 1 258 5.2E-116 T 18-10-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 SHALO_0574 d9c1ab4b2f9cd5c75e831fc818cc9d2d 273 Gene3D G3DSA:1.10.8.400 201 257 9.8E-20 T 18-10-2018 SHALO_0574 d9c1ab4b2f9cd5c75e831fc818cc9d2d 273 Gene3D G3DSA:3.40.50.720 7 199 8.1E-41 T 18-10-2018 SHALO_0574 d9c1ab4b2f9cd5c75e831fc818cc9d2d 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 3.7E-12 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_0574 d9c1ab4b2f9cd5c75e831fc818cc9d2d 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 3.7E-12 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_0574 d9c1ab4b2f9cd5c75e831fc818cc9d2d 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 3.7E-12 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_0574 d9c1ab4b2f9cd5c75e831fc818cc9d2d 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 3.7E-12 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_0574 d9c1ab4b2f9cd5c75e831fc818cc9d2d 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 3.7E-12 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_0574 d9c1ab4b2f9cd5c75e831fc818cc9d2d 273 SUPERFAMILY SSF51735 4 254 3.12E-66 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_0113 24f8e06292d978e9716f665015e40ed9 331 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 4 319 2.5E-121 T 18-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 SHALO_0113 24f8e06292d978e9716f665015e40ed9 331 SUPERFAMILY SSF56042 171 328 2.49E-47 T 18-10-2018 IPR036676 PurM-like, C-terminal domain superfamily SHALO_0113 24f8e06292d978e9716f665015e40ed9 331 SUPERFAMILY SSF55326 4 165 2.09E-46 T 18-10-2018 IPR036921 PurM-like, N-terminal domain superfamily SHALO_0113 24f8e06292d978e9716f665015e40ed9 331 Pfam PF02769 AIR synthase related protein, C-terminal domain 173 329 4.9E-28 T 18-10-2018 IPR010918 PurM-like, C-terminal domain SHALO_0113 24f8e06292d978e9716f665015e40ed9 331 Pfam PF00586 AIR synthase related protein, N-terminal domain 61 160 5.4E-11 T 18-10-2018 IPR016188 PurM-like, N-terminal domain SHALO_0113 24f8e06292d978e9716f665015e40ed9 331 Gene3D G3DSA:3.90.650.10 170 330 6.6E-54 T 18-10-2018 IPR036676 PurM-like, C-terminal domain superfamily SHALO_0113 24f8e06292d978e9716f665015e40ed9 331 Gene3D G3DSA:3.30.1330.10 3 166 1.7E-61 T 18-10-2018 IPR036921 PurM-like, N-terminal domain superfamily SHALO_0113 24f8e06292d978e9716f665015e40ed9 331 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 4 331 40.861 T 18-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 SHALO_2368 dde71b6742c20f8378b9bcbdd82e5200 244 SUPERFAMILY SSF46894 133 219 7.94E-12 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHALO_2368 dde71b6742c20f8378b9bcbdd82e5200 244 SMART SM00862 149 219 9.1E-4 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_2368 dde71b6742c20f8378b9bcbdd82e5200 244 Gene3D G3DSA:1.10.10.10 133 227 6.8E-11 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_2368 dde71b6742c20f8378b9bcbdd82e5200 244 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 219 1.6E-8 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_0863 d99c10d3e2e99c7832ee903bda219458 417 Gene3D G3DSA:3.40.50.2300 125 255 6.0E-31 T 18-10-2018 SHALO_0863 d99c10d3e2e99c7832ee903bda219458 417 Pfam PF00990 Diguanylate cyclase, GGDEF domain 258 413 2.3E-42 T 18-10-2018 IPR000160 GGDEF domain SHALO_0863 d99c10d3e2e99c7832ee903bda219458 417 SUPERFAMILY SSF52172 3 121 2.42E-17 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_0863 d99c10d3e2e99c7832ee903bda219458 417 Pfam PF00072 Response regulator receiver domain 6 105 7.4E-9 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_0863 d99c10d3e2e99c7832ee903bda219458 417 Pfam PF00072 Response regulator receiver domain 128 240 1.2E-21 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_0863 d99c10d3e2e99c7832ee903bda219458 417 SMART SM00267 246 417 5.5E-49 T 18-10-2018 IPR000160 GGDEF domain SHALO_0863 d99c10d3e2e99c7832ee903bda219458 417 SUPERFAMILY SSF52172 125 255 9.53E-30 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_0863 d99c10d3e2e99c7832ee903bda219458 417 Gene3D G3DSA:3.30.70.270 256 417 8.3E-49 T 18-10-2018 SHALO_0863 d99c10d3e2e99c7832ee903bda219458 417 SMART SM00448 4 120 2.4E-4 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_0863 d99c10d3e2e99c7832ee903bda219458 417 SMART SM00448 126 240 1.8E-27 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_0863 d99c10d3e2e99c7832ee903bda219458 417 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 254 416 1.8E-46 T 18-10-2018 IPR000160 GGDEF domain SHALO_0863 d99c10d3e2e99c7832ee903bda219458 417 SUPERFAMILY SSF55073 262 416 7.85E-43 T 18-10-2018 IPR029787 Nucleotide cyclase SHALO_0863 d99c10d3e2e99c7832ee903bda219458 417 Gene3D G3DSA:3.40.50.2300 2 124 2.8E-19 T 18-10-2018 SHALO_2226 75ddaddfa885a764ec1e944f9bfa7ce6 365 SUPERFAMILY SSF51735 8 337 2.72E-64 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_2226 75ddaddfa885a764ec1e944f9bfa7ce6 365 TIGRFAM TIGR02622 CDP_4_6_dhtase: CDP-glucose 4,6-dehydratase 8 351 6.8E-145 T 18-10-2018 IPR013445 CDP-glucose 4,6-dehydratase KEGG: 00520+4.2.1.45|MetaCyc: PWY-5833 SHALO_2226 75ddaddfa885a764ec1e944f9bfa7ce6 365 Gene3D G3DSA:3.90.25.10 194 357 6.5E-59 T 18-10-2018 SHALO_2226 75ddaddfa885a764ec1e944f9bfa7ce6 365 Pfam PF16363 GDP-mannose 4,6 dehydratase 15 328 9.8E-37 T 18-10-2018 IPR016040 NAD(P)-binding domain SHALO_2226 75ddaddfa885a764ec1e944f9bfa7ce6 365 Gene3D G3DSA:3.40.50.720 7 193 9.4E-51 T 18-10-2018 SHALO_1299 cef1ec4b9265af2a4da313786e04d6b2 259 Pfam PF01936 NYN domain 9 142 4.0E-31 T 18-10-2018 IPR021139 NYN domain, limkain-b1-type SHALO_1299 cef1ec4b9265af2a4da313786e04d6b2 259 Pfam PF12872 OST-HTH/LOTUS domain 169 237 4.7E-13 T 18-10-2018 IPR025605 OST-HTH/LOTUS domain SHALO_1299 cef1ec4b9265af2a4da313786e04d6b2 259 Gene3D G3DSA:3.40.50.1010 1 147 1.6E-17 T 18-10-2018 SHALO_1299 cef1ec4b9265af2a4da313786e04d6b2 259 Gene3D G3DSA:1.10.10.1880 175 245 1.6E-17 T 18-10-2018 SHALO_2118 02891966425ee05be9e6b30a3ee38839 291 SUPERFAMILY SSF102114 4 284 9.94E-28 T 18-10-2018 SHALO_2118 02891966425ee05be9e6b30a3ee38839 291 Pfam PF13186 Iron-sulfur cluster-binding domain 216 282 7.4E-11 T 18-10-2018 IPR023885 4Fe4S-binding SPASM domain SHALO_2118 02891966425ee05be9e6b30a3ee38839 291 Pfam PF04055 Radical SAM superfamily 9 113 1.1E-7 T 18-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 SHALO_2918 22afe1589b37b5fb9ba6051ba0ef0f37 250 SUPERFAMILY SSF53335 39 195 4.22E-24 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_2918 22afe1589b37b5fb9ba6051ba0ef0f37 250 Gene3D G3DSA:3.40.50.150 39 196 7.9E-24 T 18-10-2018 SHALO_2918 22afe1589b37b5fb9ba6051ba0ef0f37 250 Pfam PF08241 Methyltransferase domain 55 143 6.1E-16 T 18-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 SHALO_2666 d53e819ab911731db037ff1fb7a85381 225 Gene3D G3DSA:3.30.1150.10 101 224 1.4E-25 T 18-10-2018 SHALO_2666 d53e819ab911731db037ff1fb7a85381 225 SUPERFAMILY SSF74653 123 224 3.01E-20 T 18-10-2018 SHALO_2666 d53e819ab911731db037ff1fb7a85381 225 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 149 224 2.3E-17 T 18-10-2018 IPR006260 TonB/TolA, C-terminal SHALO_2666 d53e819ab911731db037ff1fb7a85381 225 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 148 223 1.3E-15 T 18-10-2018 IPR037682 TonB, C-terminal GO:0055085 SHALO_1257 dcf1a28b1d12b81c4401ef8f81778930 847 SUPERFAMILY SSF50692 695 844 1.13E-41 T 18-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily SHALO_1257 dcf1a28b1d12b81c4401ef8f81778930 847 Pfam PF00384 Molybdopterin oxidoreductase 92 577 6.7E-85 T 18-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_1257 dcf1a28b1d12b81c4401ef8f81778930 847 Pfam PF01568 Molydopterin dinucleotide binding domain 704 822 6.0E-24 T 18-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 SHALO_1257 dcf1a28b1d12b81c4401ef8f81778930 847 SUPERFAMILY SSF53706 50 701 3.93E-152 T 18-10-2018 SHALO_1257 dcf1a28b1d12b81c4401ef8f81778930 847 Gene3D G3DSA:2.40.40.20 679 841 6.1E-49 T 18-10-2018 SHALO_1257 dcf1a28b1d12b81c4401ef8f81778930 847 TIGRFAM TIGR00509 bisC_fam: molybdopterin guanine dinucleotide-containing S/N-oxide reductases 49 845 0.0 T 18-10-2018 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase GO:0016491|GO:0055114 SHALO_1746 66b879a367a6a70ade42dd6a71bcefaf 859 Gene3D G3DSA:3.30.70.270 431 613 8.9E-52 T 18-10-2018 SHALO_1746 66b879a367a6a70ade42dd6a71bcefaf 859 SMART SM00267 424 600 3.9E-50 T 18-10-2018 IPR000160 GGDEF domain SHALO_1746 66b879a367a6a70ade42dd6a71bcefaf 859 Pfam PF11845 Protein of unknown function (DUF3365) 18 196 4.7E-31 T 18-10-2018 IPR021796 Protein of unknown function DUF3365 SHALO_1746 66b879a367a6a70ade42dd6a71bcefaf 859 SUPERFAMILY SSF141868 616 857 6.28E-86 T 18-10-2018 IPR035919 EAL domain superfamily SHALO_1746 66b879a367a6a70ade42dd6a71bcefaf 859 SUPERFAMILY SSF55073 440 602 1.41E-41 T 18-10-2018 IPR029787 Nucleotide cyclase SHALO_1746 66b879a367a6a70ade42dd6a71bcefaf 859 Pfam PF00990 Diguanylate cyclase, GGDEF domain 436 596 8.1E-41 T 18-10-2018 IPR000160 GGDEF domain SHALO_1746 66b879a367a6a70ade42dd6a71bcefaf 859 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 434 599 3.3E-34 T 18-10-2018 IPR000160 GGDEF domain SHALO_1746 66b879a367a6a70ade42dd6a71bcefaf 859 Gene3D G3DSA:3.30.450.40 270 430 5.0E-8 T 18-10-2018 IPR029016 GAF-like domain superfamily SHALO_1746 66b879a367a6a70ade42dd6a71bcefaf 859 Pfam PF00563 EAL domain 616 851 1.3E-71 T 18-10-2018 IPR001633 EAL domain SHALO_1746 66b879a367a6a70ade42dd6a71bcefaf 859 Gene3D G3DSA:3.20.20.450 614 859 5.4E-94 T 18-10-2018 IPR035919 EAL domain superfamily SHALO_1746 66b879a367a6a70ade42dd6a71bcefaf 859 SUPERFAMILY SSF55781 259 423 3.45E-6 T 18-10-2018 SHALO_1746 66b879a367a6a70ade42dd6a71bcefaf 859 SMART SM00052 610 856 2.3E-107 T 18-10-2018 IPR001633 EAL domain SHALO_1300 d8a4f1718795ee06c3542ae06b518cd5 407 Gene3D G3DSA:1.20.1250.20 13 395 1.2E-35 T 18-10-2018 SHALO_1300 d8a4f1718795ee06c3542ae06b518cd5 407 Pfam PF05977 Transmembrane secretion effector 5 392 9.5E-60 T 18-10-2018 IPR010290 Transmembrane secretion effector SHALO_1300 d8a4f1718795ee06c3542ae06b518cd5 407 SUPERFAMILY SSF103473 12 399 3.79E-45 T 18-10-2018 IPR036259 MFS transporter superfamily SHALO_1411 5c8dc60e7675a65b8c8808c7bf12d2d7 89 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 78 1.8E-26 T 18-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC SHALO_1411 5c8dc60e7675a65b8c8808c7bf12d2d7 89 SUPERFAMILY SSF159127 1 78 1.18E-25 T 18-10-2018 IPR037254 HupF/HypC superfamily SHALO_1411 5c8dc60e7675a65b8c8808c7bf12d2d7 89 Pfam PF01455 HupF/HypC family 1 66 1.2E-25 T 18-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC SHALO_1411 5c8dc60e7675a65b8c8808c7bf12d2d7 89 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 18 34 1.1E-13 T 18-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC SHALO_1411 5c8dc60e7675a65b8c8808c7bf12d2d7 89 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 40 56 1.1E-13 T 18-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC SHALO_1411 5c8dc60e7675a65b8c8808c7bf12d2d7 89 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 58 70 1.1E-13 T 18-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC SHALO_1411 5c8dc60e7675a65b8c8808c7bf12d2d7 89 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 1.1E-13 T 18-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC SHALO_1411 5c8dc60e7675a65b8c8808c7bf12d2d7 89 Gene3D G3DSA:2.40.50.970 1 81 9.9E-30 T 18-10-2018 IPR037254 HupF/HypC superfamily SHALO_2967 ed4050364a40dd38886df48e891c93c1 92 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 3 73 2.1E-24 T 18-10-2018 IPR000504 RNA recognition motif domain GO:0003676 SHALO_2967 ed4050364a40dd38886df48e891c93c1 92 SMART SM00360 2 75 5.9E-28 T 18-10-2018 IPR000504 RNA recognition motif domain GO:0003676 SHALO_2967 ed4050364a40dd38886df48e891c93c1 92 Gene3D G3DSA:3.30.70.330 1 90 6.8E-31 T 18-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily SHALO_2967 ed4050364a40dd38886df48e891c93c1 92 SUPERFAMILY SSF54928 2 89 1.17E-31 T 18-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 SHALO_1115 b7bdd9e04644b5536573fb33bc826b1f 1243 SUPERFAMILY SSF141072 251 373 7.19E-21 T 18-10-2018 IPR038081 CalX-like domain superfamily SHALO_1115 b7bdd9e04644b5536573fb33bc826b1f 1243 SUPERFAMILY SSF49899 390 643 4.35E-15 T 18-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily SHALO_1115 b7bdd9e04644b5536573fb33bc826b1f 1243 Gene3D G3DSA:2.60.40.2030 249 375 6.3E-19 T 18-10-2018 IPR038081 CalX-like domain superfamily SHALO_1115 b7bdd9e04644b5536573fb33bc826b1f 1243 SUPERFAMILY SSF141072 141 266 1.22E-26 T 18-10-2018 IPR038081 CalX-like domain superfamily SHALO_1115 b7bdd9e04644b5536573fb33bc826b1f 1243 Pfam PF03160 Calx-beta domain 160 229 6.7E-14 T 18-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 SHALO_1115 b7bdd9e04644b5536573fb33bc826b1f 1243 Pfam PF03160 Calx-beta domain 242 350 3.5E-13 T 18-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 SHALO_1115 b7bdd9e04644b5536573fb33bc826b1f 1243 SMART SM00237 132 229 3.7E-4 T 18-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 SHALO_1115 b7bdd9e04644b5536573fb33bc826b1f 1243 SMART SM00237 241 351 3.7E-6 T 18-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 SHALO_1115 b7bdd9e04644b5536573fb33bc826b1f 1243 Gene3D G3DSA:2.60.120.380 18 134 2.3E-12 T 18-10-2018 SHALO_1115 b7bdd9e04644b5536573fb33bc826b1f 1243 SUPERFAMILY SSF89260 21 133 4.84E-5 T 18-10-2018 SHALO_1115 b7bdd9e04644b5536573fb33bc826b1f 1243 Gene3D G3DSA:2.60.40.2030 143 248 7.0E-24 T 18-10-2018 IPR038081 CalX-like domain superfamily SHALO_1104 54f9d3af889bdd56cdac24b76bc64e5b 115 SUPERFAMILY SSF46626 27 111 1.6E-7 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_1104 54f9d3af889bdd56cdac24b76bc64e5b 115 Gene3D G3DSA:1.10.760.10 28 115 3.0E-6 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_2474 2267b1cbadefe4eca255c2520f4cb413 145 Pfam PF02635 DsrE/DsrF-like family 43 138 9.6E-9 T 18-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein SHALO_2474 2267b1cbadefe4eca255c2520f4cb413 145 Gene3D G3DSA:3.40.1260.10 30 144 6.4E-22 T 18-10-2018 IPR027396 DsrEFH-like SHALO_2474 2267b1cbadefe4eca255c2520f4cb413 145 SUPERFAMILY SSF75169 31 143 4.71E-23 T 18-10-2018 IPR027396 DsrEFH-like SHALO_1845 6ccd1f9680c03f41042859c51aa3c16e 358 Gene3D G3DSA:3.10.580.10 179 325 3.6E-38 T 18-10-2018 SHALO_1845 6ccd1f9680c03f41042859c51aa3c16e 358 SUPERFAMILY SSF54631 184 317 9.43E-24 T 18-10-2018 SHALO_1845 6ccd1f9680c03f41042859c51aa3c16e 358 Pfam PF01595 Domain of unknown function DUF21 10 180 6.8E-27 T 18-10-2018 IPR002550 CNNM, transmembrane domain SHALO_1845 6ccd1f9680c03f41042859c51aa3c16e 358 Pfam PF00571 CBS domain 196 245 0.0029 T 18-10-2018 IPR000644 CBS domain SHALO_1845 6ccd1f9680c03f41042859c51aa3c16e 358 Pfam PF00571 CBS domain 266 316 1.2E-5 T 18-10-2018 IPR000644 CBS domain SHALO_2561 c212bfa33461c2a87dd2ce73760a1d12 391 Pfam PF02687 FtsX-like permease family 283 383 2.9E-13 T 18-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 SHALO_0347 c212bfa33461c2a87dd2ce73760a1d12 391 Pfam PF02687 FtsX-like permease family 283 383 2.9E-13 T 18-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 SHALO_0197 4658bf47645c03b780349bdd562cbbf5 472 SUPERFAMILY SSF53720 4 471 1.83E-136 T 18-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 SHALO_0197 4658bf47645c03b780349bdd562cbbf5 472 Pfam PF00171 Aldehyde dehydrogenase family 19 470 7.5E-146 T 18-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 SHALO_0197 4658bf47645c03b780349bdd562cbbf5 472 Gene3D G3DSA:3.40.605.10 9 468 3.7E-147 T 18-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 SHALO_0197 4658bf47645c03b780349bdd562cbbf5 472 Gene3D G3DSA:3.40.309.10 248 440 3.7E-147 T 18-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 SHALO_0197 4658bf47645c03b780349bdd562cbbf5 472 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 243 250 - T 18-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 SHALO_2515 d32a40f07339288c79d3bea223fae2e2 671 Gene3D G3DSA:2.170.130.10 41 147 1.1E-28 T 18-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily SHALO_2515 d32a40f07339288c79d3bea223fae2e2 671 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 654 671 - T 18-10-2018 IPR010917 TonB-dependent receptor, conserved site SHALO_2515 d32a40f07339288c79d3bea223fae2e2 671 Pfam PF07715 TonB-dependent Receptor Plug Domain 42 138 2.7E-12 T 18-10-2018 IPR012910 TonB-dependent receptor, plug domain SHALO_2515 d32a40f07339288c79d3bea223fae2e2 671 Pfam PF00593 TonB dependent receptor 239 669 8.1E-36 T 18-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel SHALO_2515 d32a40f07339288c79d3bea223fae2e2 671 Gene3D G3DSA:2.40.170.20 149 671 1.0E-89 T 18-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily SHALO_2515 d32a40f07339288c79d3bea223fae2e2 671 SUPERFAMILY SSF56935 44 671 1.1E-85 T 18-10-2018 SHALO_1139 031cef1a7afcb34073bab89132cdbce3 66 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 4 65 1.0E-18 T 18-10-2018 IPR010035 ThiS, thiamine-biosynthesis SHALO_1139 031cef1a7afcb34073bab89132cdbce3 66 Pfam PF02597 ThiS family 9 65 6.5E-14 T 18-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 SHALO_1139 031cef1a7afcb34073bab89132cdbce3 66 SUPERFAMILY SSF54285 2 64 1.64E-15 T 18-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp SHALO_1139 031cef1a7afcb34073bab89132cdbce3 66 Gene3D G3DSA:3.10.20.30 1 66 5.2E-19 T 18-10-2018 IPR012675 Beta-grasp domain superfamily SHALO_1366 e9a57dbdacec34c49dd1f2320d288b80 99 ProDom PD351196 CJ1463 JHP0230 HP0245 26 98 2.0E-18 T 18-10-2018 SHALO_1366 e9a57dbdacec34c49dd1f2320d288b80 99 Pfam PF10135 Rod binding protein 54 92 2.6E-6 T 18-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal SHALO_0593 86f7dfa247a735024c78cc077d816a4a 471 Pfam PF07498 Rho termination factor, N-terminal domain 62 103 4.7E-15 T 18-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 SHALO_0593 86f7dfa247a735024c78cc077d816a4a 471 SUPERFAMILY SSF50249 105 178 3.26E-23 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold SHALO_0593 86f7dfa247a735024c78cc077d816a4a 471 Gene3D G3DSA:1.10.720.10 58 102 3.5E-14 T 18-10-2018 SHALO_0593 86f7dfa247a735024c78cc077d816a4a 471 SUPERFAMILY SSF68912 58 103 1.69E-9 T 18-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily SHALO_0593 86f7dfa247a735024c78cc077d816a4a 471 Gene3D G3DSA:3.40.50.300 187 470 1.2E-120 T 18-10-2018 SHALO_0593 86f7dfa247a735024c78cc077d816a4a 471 SMART SM00357 108 174 1.5E-11 T 18-10-2018 IPR011129 Cold shock domain GO:0003676 SHALO_0593 86f7dfa247a735024c78cc077d816a4a 471 Gene3D G3DSA:2.40.50.140 103 179 3.9E-29 T 18-10-2018 SHALO_0593 86f7dfa247a735024c78cc077d816a4a 471 Pfam PF07497 Rho termination factor, RNA-binding domain 108 178 4.5E-27 T 18-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 SHALO_0593 86f7dfa247a735024c78cc077d816a4a 471 SMART SM00959 61 103 1.5E-14 T 18-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 SHALO_0593 86f7dfa247a735024c78cc077d816a4a 471 SUPERFAMILY SSF52540 147 424 1.09E-64 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0593 86f7dfa247a735024c78cc077d816a4a 471 Hamap MF_01884 Transcription termination factor Rho [rho]. 57 471 210.241 T 18-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 SHALO_0593 86f7dfa247a735024c78cc077d816a4a 471 SMART SM00382 223 381 5.9E-8 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_0593 86f7dfa247a735024c78cc077d816a4a 471 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 213 416 2.8E-21 T 18-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 SHALO_0593 86f7dfa247a735024c78cc077d816a4a 471 TIGRFAM TIGR00767 rho: transcription termination factor Rho 58 470 5.2E-202 T 18-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 SHALO_2876 1dd9e271d4708c6aad35fd6ac1e4c94f 161 TIGRFAM TIGR02694 arsenite_ox_S: arsenite oxidase, small subunit 45 158 1.6E-32 T 18-10-2018 IPR014067 Arsenite oxidase, small subunit MetaCyc: PWY-7429 SHALO_2876 1dd9e271d4708c6aad35fd6ac1e4c94f 161 Pfam PF00355 Rieske [2Fe-2S] domain 76 132 6.3E-11 T 18-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 SHALO_2876 1dd9e271d4708c6aad35fd6ac1e4c94f 161 Gene3D G3DSA:2.102.10.10 42 160 3.6E-28 T 18-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 SHALO_2876 1dd9e271d4708c6aad35fd6ac1e4c94f 161 SUPERFAMILY SSF50022 43 146 9.17E-22 T 18-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 SHALO_2184 ef80819a51d43e58bace1df80065c38b 286 Pfam PF09982 Uncharacterized protein conserved in bacteria (DUF2219) 2 283 9.7E-50 T 18-10-2018 IPR018707 Protein of unknown function DUF2219 SHALO_2184 ef80819a51d43e58bace1df80065c38b 286 Gene3D G3DSA:2.40.128.140 2 272 1.1E-40 T 18-10-2018 IPR037107 Putative outer membrane protein superfamily SHALO_1400 27c564892d3f794e61de3fb3c9853625 385 Pfam PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal 250 332 2.5E-32 T 18-10-2018 IPR027394 Cytochrome-c3 hydrogenase, C-terminal SHALO_1400 27c564892d3f794e61de3fb3c9853625 385 SUPERFAMILY SSF56770 72 334 1.02E-87 T 18-10-2018 SHALO_1400 27c564892d3f794e61de3fb3c9853625 385 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 84 230 2.7E-28 T 18-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_1400 27c564892d3f794e61de3fb3c9853625 385 Gene3D G3DSA:3.40.50.700 68 249 1.5E-64 T 18-10-2018 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily SHALO_1400 27c564892d3f794e61de3fb3c9853625 385 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 38 61 1.7E-6 T 18-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal SHALO_1400 27c564892d3f794e61de3fb3c9853625 385 TIGRFAM TIGR00391 hydA: hydrogenase (NiFe) small subunit (hydA) 25 378 3.0E-161 T 18-10-2018 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SHALO_1400 27c564892d3f794e61de3fb3c9853625 385 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 183 207 5.2E-84 T 18-10-2018 SHALO_1400 27c564892d3f794e61de3fb3c9853625 385 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 237 254 5.2E-84 T 18-10-2018 SHALO_1400 27c564892d3f794e61de3fb3c9853625 385 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 307 320 5.2E-84 T 18-10-2018 SHALO_1400 27c564892d3f794e61de3fb3c9853625 385 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 255 273 5.2E-84 T 18-10-2018 SHALO_1400 27c564892d3f794e61de3fb3c9853625 385 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 279 305 5.2E-84 T 18-10-2018 SHALO_1400 27c564892d3f794e61de3fb3c9853625 385 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 92 116 5.2E-84 T 18-10-2018 SHALO_1400 27c564892d3f794e61de3fb3c9853625 385 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 138 161 5.2E-84 T 18-10-2018 SHALO_1400 27c564892d3f794e61de3fb3c9853625 385 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 69 91 5.2E-84 T 18-10-2018 SHALO_1400 27c564892d3f794e61de3fb3c9853625 385 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 211 234 5.2E-84 T 18-10-2018 SHALO_1400 27c564892d3f794e61de3fb3c9853625 385 Gene3D G3DSA:4.10.480.10 252 368 4.9E-44 T 18-10-2018 IPR037148 [NiFe]-hydrogenase, small subunit, C-terminal domain superfamily SHALO_1400 27c564892d3f794e61de3fb3c9853625 385 PIRSF PIRSF000310 27 385 1.1E-143 T 18-10-2018 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SHALO_0296 19c130faadc4fcaec1767d9e6d4a9346 337 SUPERFAMILY SSF53597 175 332 5.13E-25 T 18-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 SHALO_0296 19c130faadc4fcaec1767d9e6d4a9346 337 Gene3D G3DSA:3.40.140.10 3 170 2.3E-26 T 18-10-2018 SHALO_0296 19c130faadc4fcaec1767d9e6d4a9346 337 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 7 130 7.5E-14 T 18-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain SHALO_0296 19c130faadc4fcaec1767d9e6d4a9346 337 Gene3D G3DSA:3.40.430.10 171 291 9.8E-15 T 18-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 SHALO_0296 19c130faadc4fcaec1767d9e6d4a9346 337 SUPERFAMILY SSF53927 6 172 5.38E-29 T 18-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 SHALO_0296 19c130faadc4fcaec1767d9e6d4a9346 337 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 10 254 3.3E-60 T 18-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 SHALO_1576 c37faa0d1eeeda82d390f53f415ec910 92 Pfam PF00226 DnaJ domain 16 62 3.1E-8 T 18-10-2018 IPR001623 DnaJ domain SHALO_1576 c37faa0d1eeeda82d390f53f415ec910 92 SUPERFAMILY SSF46565 12 72 7.07E-11 T 18-10-2018 IPR036869 Chaperone J-domain superfamily SHALO_1576 c37faa0d1eeeda82d390f53f415ec910 92 SMART SM00271 11 66 0.0013 T 18-10-2018 IPR001623 DnaJ domain SHALO_1576 c37faa0d1eeeda82d390f53f415ec910 92 Gene3D G3DSA:1.10.287.110 1 78 8.4E-12 T 18-10-2018 IPR036869 Chaperone J-domain superfamily SHALO_1174 cb379733145d0460578c7fe716d7a569 255 Pfam PF00149 Calcineurin-like phosphoesterase 29 192 4.1E-16 T 18-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 SHALO_1174 cb379733145d0460578c7fe716d7a569 255 SUPERFAMILY SSF56300 29 247 2.81E-38 T 18-10-2018 SHALO_1174 cb379733145d0460578c7fe716d7a569 255 Gene3D G3DSA:3.60.21.10 27 230 2.6E-27 T 18-10-2018 IPR029052 Metallo-dependent phosphatase-like SHALO_2182 61c9d8abffcd939c7a466afadb16d209 120 Gene3D G3DSA:1.20.120.50 2 119 1.1E-14 T 18-10-2018 IPR035938 Hemerythrin-like superfamily SHALO_2182 61c9d8abffcd939c7a466afadb16d209 120 ProSitePatterns PS00550 Hemerythrin family signature. 42 65 - T 18-10-2018 IPR016131 Haemerythrin, iron-binding site GO:0046872 SHALO_2182 61c9d8abffcd939c7a466afadb16d209 120 SUPERFAMILY SSF47188 2 113 1.31E-16 T 18-10-2018 IPR035938 Hemerythrin-like superfamily SHALO_1720 5f0271b0c2379d38e8ebae9b67975747 730 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 164 182 4.1E-54 T 18-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SHALO_1720 5f0271b0c2379d38e8ebae9b67975747 730 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 194 211 4.1E-54 T 18-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SHALO_1720 5f0271b0c2379d38e8ebae9b67975747 730 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 41 54 4.1E-54 T 18-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SHALO_1720 5f0271b0c2379d38e8ebae9b67975747 730 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 245 259 4.1E-54 T 18-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SHALO_1720 5f0271b0c2379d38e8ebae9b67975747 730 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 78 97 4.1E-54 T 18-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SHALO_1720 5f0271b0c2379d38e8ebae9b67975747 730 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 145 161 4.1E-54 T 18-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SHALO_1720 5f0271b0c2379d38e8ebae9b67975747 730 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 23 725 2.1E-272 T 18-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 SHALO_1720 5f0271b0c2379d38e8ebae9b67975747 730 Gene3D G3DSA:3.40.30.60 392 535 1.0E-53 T 18-10-2018 SHALO_1720 5f0271b0c2379d38e8ebae9b67975747 730 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 150 173 - T 18-10-2018 IPR025505 FHIPEP conserved site SHALO_1720 5f0271b0c2379d38e8ebae9b67975747 730 Pfam PF00771 FHIPEP family 34 716 7.6E-250 T 18-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SHALO_1720 5f0271b0c2379d38e8ebae9b67975747 730 Gene3D G3DSA:1.10.490.80 626 725 4.0E-5 T 18-10-2018 SHALO_1720 5f0271b0c2379d38e8ebae9b67975747 730 PIRSF PIRSF005419 9 730 1.2E-231 T 18-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SHALO_1720 5f0271b0c2379d38e8ebae9b67975747 730 Gene3D G3DSA:1.10.8.540 536 624 1.0E-24 T 18-10-2018 SHALO_1245 5eebf949a310c2f91fe9653a301487f0 316 Pfam PF13536 Putative multidrug resistance efflux transporter 39 303 5.8E-96 T 18-10-2018 IPR032713 Putative multidrug resistance efflux transporter SHALO_1245 5eebf949a310c2f91fe9653a301487f0 316 SUPERFAMILY SSF103481 209 306 8.76E-5 T 18-10-2018 SHALO_0370 e615b68988c14ce2d9588f9eee6eebea 83 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 3 83 1.1E-7 T 18-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family SHALO_0370 e615b68988c14ce2d9588f9eee6eebea 83 SUPERFAMILY SSF143011 1 82 2.09E-19 T 18-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily SHALO_0370 e615b68988c14ce2d9588f9eee6eebea 83 Gene3D G3DSA:3.30.2310.20 1 83 4.8E-18 T 18-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily SHALO_0370 e615b68988c14ce2d9588f9eee6eebea 83 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 83 7.2E-9 T 18-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family SHALO_1053 7563687fcb2f909d24a1af37a93ecea5 256 Pfam PF01841 Transglutaminase-like superfamily 139 207 3.1E-15 T 18-10-2018 IPR002931 Transglutaminase-like SHALO_1053 7563687fcb2f909d24a1af37a93ecea5 256 SMART SM00460 151 209 7.9E-15 T 18-10-2018 IPR002931 Transglutaminase-like SHALO_1053 7563687fcb2f909d24a1af37a93ecea5 256 Gene3D G3DSA:3.10.620.30 74 243 8.1E-27 T 18-10-2018 SHALO_1053 7563687fcb2f909d24a1af37a93ecea5 256 SUPERFAMILY SSF54001 117 230 2.94E-22 T 18-10-2018 IPR038765 Papain-like cysteine peptidase superfamily SHALO_1053 7563687fcb2f909d24a1af37a93ecea5 256 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 7 81 9.0E-10 T 18-10-2018 IPR013589 Bacterial transglutaminase-like, N-terminal SHALO_2835 35787678a1d0708c990ed3d771157e83 150 PIRSF PIRSF028777 1 138 4.0E-50 T 18-10-2018 IPR031308 Uncharacterised conserved protein UCP028777 SHALO_2835 35787678a1d0708c990ed3d771157e83 150 Pfam PF03733 Inner membrane component domain 4 54 1.2E-13 T 18-10-2018 IPR005185 Inner membrane component domain SHALO_2835 35787678a1d0708c990ed3d771157e83 150 Pfam PF03733 Inner membrane component domain 76 126 2.3E-17 T 18-10-2018 IPR005185 Inner membrane component domain SHALO_1619 94b0eb66613003f834a345dfbceec1dc 245 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 110 243 2.1E-23 T 18-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal SHALO_1619 94b0eb66613003f834a345dfbceec1dc 245 Pfam PF13144 Chaperone for flagella basal body P-ring formation 69 242 5.9E-22 T 18-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal SHALO_1619 94b0eb66613003f834a345dfbceec1dc 245 Gene3D G3DSA:2.30.30.760 186 245 3.9E-6 T 18-10-2018 SHALO_0127 17e6365c3d484712a0cbe1d3c6c74944 117 Gene3D G3DSA:1.10.720.90 2 55 2.8E-21 T 18-10-2018 SHALO_0127 17e6365c3d484712a0cbe1d3c6c74944 117 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 2.4E-50 T 18-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_0127 17e6365c3d484712a0cbe1d3c6c74944 117 Pfam PF00453 Ribosomal protein L20 3 108 5.2E-46 T 18-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_0127 17e6365c3d484712a0cbe1d3c6c74944 117 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 18-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_0127 17e6365c3d484712a0cbe1d3c6c74944 117 Gene3D G3DSA:1.10.1900.20 56 117 1.2E-30 T 18-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_0127 17e6365c3d484712a0cbe1d3c6c74944 117 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 20 70 9.0E-13 T 18-10-2018 SHALO_0127 17e6365c3d484712a0cbe1d3c6c74944 117 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 29.257 T 18-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_0127 17e6365c3d484712a0cbe1d3c6c74944 117 SUPERFAMILY SSF74731 3 115 1.57E-46 T 18-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_0127 17e6365c3d484712a0cbe1d3c6c74944 117 PRINTS PR00062 Ribosomal protein L20 signature 75 101 4.8E-39 T 18-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_0127 17e6365c3d484712a0cbe1d3c6c74944 117 PRINTS PR00062 Ribosomal protein L20 signature 42 71 4.8E-39 T 18-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_0127 17e6365c3d484712a0cbe1d3c6c74944 117 PRINTS PR00062 Ribosomal protein L20 signature 12 41 4.8E-39 T 18-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_0102 dc026a9f5fdca0c46b837d8d45d5d76d 358 Pfam PF04055 Radical SAM superfamily 116 279 8.1E-14 T 18-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 SHALO_0102 dc026a9f5fdca0c46b837d8d45d5d76d 358 PIRSF PIRSF006004 2 358 5.4E-132 T 18-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 SHALO_0102 dc026a9f5fdca0c46b837d8d45d5d76d 358 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 2 355 1.5E-134 T 18-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 SHALO_0102 dc026a9f5fdca0c46b837d8d45d5d76d 358 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 3 354 69.078 T 18-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 SHALO_0102 dc026a9f5fdca0c46b837d8d45d5d76d 358 Gene3D G3DSA:1.10.150.530 3 59 8.0E-18 T 18-10-2018 SHALO_0102 dc026a9f5fdca0c46b837d8d45d5d76d 358 SUPERFAMILY SSF102114 110 312 1.05E-10 T 18-10-2018 SHALO_0102 dc026a9f5fdca0c46b837d8d45d5d76d 358 Gene3D G3DSA:3.20.20.70 63 338 3.4E-96 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_2595 4f9fa8fc24552a8ab0ab0395944c8fff 598 Gene3D G3DSA:3.40.50.2000 435 568 6.2E-7 T 18-10-2018 SHALO_2595 4f9fa8fc24552a8ab0ab0395944c8fff 598 Gene3D G3DSA:1.25.40.10 7 115 3.0E-15 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SHALO_2595 4f9fa8fc24552a8ab0ab0395944c8fff 598 Gene3D G3DSA:1.25.40.10 209 316 1.6E-26 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SHALO_2595 4f9fa8fc24552a8ab0ab0395944c8fff 598 Pfam PF13181 Tetratricopeptide repeat 48 78 4.1E-4 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_2595 4f9fa8fc24552a8ab0ab0395944c8fff 598 SUPERFAMILY SSF53756 337 568 6.28E-15 T 18-10-2018 SHALO_2595 4f9fa8fc24552a8ab0ab0395944c8fff 598 Gene3D G3DSA:1.25.40.10 116 208 1.0E-21 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SHALO_2595 4f9fa8fc24552a8ab0ab0395944c8fff 598 SUPERFAMILY SSF48452 14 314 1.9E-48 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SHALO_2595 4f9fa8fc24552a8ab0ab0395944c8fff 598 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 504 565 8.5E-5 T 18-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 SHALO_2595 4f9fa8fc24552a8ab0ab0395944c8fff 598 Pfam PF13432 Tetratricopeptide repeat 128 180 5.7E-4 T 18-10-2018 SHALO_2595 4f9fa8fc24552a8ab0ab0395944c8fff 598 Pfam PF00515 Tetratricopeptide repeat 183 215 1.5E-11 T 18-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 SHALO_2595 4f9fa8fc24552a8ab0ab0395944c8fff 598 Pfam PF00515 Tetratricopeptide repeat 217 249 5.3E-7 T 18-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 SHALO_2595 4f9fa8fc24552a8ab0ab0395944c8fff 598 Pfam PF00515 Tetratricopeptide repeat 250 283 1.1E-10 T 18-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 SHALO_2595 4f9fa8fc24552a8ab0ab0395944c8fff 598 SMART SM00028 10 43 350.0 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_2595 4f9fa8fc24552a8ab0ab0395944c8fff 598 SMART SM00028 81 114 260.0 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_2595 4f9fa8fc24552a8ab0ab0395944c8fff 598 SMART SM00028 47 80 2.9E-4 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_2595 4f9fa8fc24552a8ab0ab0395944c8fff 598 SMART SM00028 182 215 3.3E-9 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_2595 4f9fa8fc24552a8ab0ab0395944c8fff 598 SMART SM00028 250 283 2.2E-9 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_2595 4f9fa8fc24552a8ab0ab0395944c8fff 598 SMART SM00028 216 249 1.5E-5 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_2595 4f9fa8fc24552a8ab0ab0395944c8fff 598 SMART SM00028 148 181 7.2E-4 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_1607 869c5d441698b90d8785d63e6f0ecb92 442 Gene3D G3DSA:3.40.50.1980 27 169 5.5E-36 T 18-10-2018 SHALO_1607 869c5d441698b90d8785d63e6f0ecb92 442 Gene3D G3DSA:3.40.50.12380 170 435 8.3E-59 T 18-10-2018 SHALO_1607 869c5d441698b90d8785d63e6f0ecb92 442 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 40 427 3.4E-69 T 18-10-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 SHALO_1607 869c5d441698b90d8785d63e6f0ecb92 442 SUPERFAMILY SSF53807 18 437 3.27E-86 T 18-10-2018 SHALO_1755 5764820a2cf0e182d7f84dfc6231bef2 134 Gene3D G3DSA:3.40.50.280 1 132 6.1E-27 T 18-10-2018 SHALO_1755 5764820a2cf0e182d7f84dfc6231bef2 134 SUPERFAMILY SSF52242 1 116 2.75E-26 T 18-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 SHALO_1755 5764820a2cf0e182d7f84dfc6231bef2 134 Pfam PF02310 B12 binding domain 1 91 8.9E-11 T 18-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 SHALO_2282 3aa0f06206caf705af1d68f476863bff 391 Pfam PF02397 Bacterial sugar transferase 194 385 2.8E-67 T 18-10-2018 IPR003362 Bacterial sugar transferase SHALO_2282 3aa0f06206caf705af1d68f476863bff 391 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 10 391 3.1E-98 T 18-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase SHALO_2279 10c0c958137c408279e77c3ee0fc815a 354 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 32 354 5.6E-116 T 18-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 SHALO_2279 10c0c958137c408279e77c3ee0fc815a 354 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 20 352 22.55 T 18-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 SHALO_2279 10c0c958137c408279e77c3ee0fc815a 354 Pfam PF00953 Glycosyl transferase family 4 94 278 8.6E-35 T 18-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 SHALO_2279 10c0c958137c408279e77c3ee0fc815a 354 ProSitePatterns PS01347 MraY family signature 1. 63 75 - T 18-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 SHALO_2279 10c0c958137c408279e77c3ee0fc815a 354 ProSitePatterns PS01348 MraY family signature 2. 183 194 - T 18-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 SHALO_2998 553ce58ac971dd974e4c07159e6eef8b 404 SUPERFAMILY SSF52821 169 266 2.23E-19 T 18-10-2018 IPR036873 Rhodanese-like domain superfamily SHALO_2998 553ce58ac971dd974e4c07159e6eef8b 404 SUPERFAMILY SSF52821 292 373 3.4E-18 T 18-10-2018 IPR036873 Rhodanese-like domain superfamily SHALO_2998 553ce58ac971dd974e4c07159e6eef8b 404 Gene3D G3DSA:3.40.250.10 165 266 1.6E-17 T 18-10-2018 IPR036873 Rhodanese-like domain superfamily SHALO_2998 553ce58ac971dd974e4c07159e6eef8b 404 Gene3D G3DSA:3.40.250.10 43 162 1.1E-17 T 18-10-2018 IPR036873 Rhodanese-like domain superfamily SHALO_2998 553ce58ac971dd974e4c07159e6eef8b 404 Gene3D G3DSA:3.40.250.10 303 385 1.1E-16 T 18-10-2018 IPR036873 Rhodanese-like domain superfamily SHALO_2998 553ce58ac971dd974e4c07159e6eef8b 404 SMART SM00450 293 392 5.2E-7 T 18-10-2018 IPR001763 Rhodanese-like domain SHALO_2998 553ce58ac971dd974e4c07159e6eef8b 404 SMART SM00450 60 160 2.9E-13 T 18-10-2018 IPR001763 Rhodanese-like domain SHALO_2998 553ce58ac971dd974e4c07159e6eef8b 404 SMART SM00450 162 261 1.4E-9 T 18-10-2018 IPR001763 Rhodanese-like domain SHALO_2998 553ce58ac971dd974e4c07159e6eef8b 404 Pfam PF00581 Rhodanese-like domain 73 156 6.7E-11 T 18-10-2018 IPR001763 Rhodanese-like domain SHALO_2998 553ce58ac971dd974e4c07159e6eef8b 404 Pfam PF00581 Rhodanese-like domain 169 258 1.1E-10 T 18-10-2018 IPR001763 Rhodanese-like domain SHALO_2998 553ce58ac971dd974e4c07159e6eef8b 404 Pfam PF00581 Rhodanese-like domain 297 372 1.4E-10 T 18-10-2018 IPR001763 Rhodanese-like domain SHALO_2998 553ce58ac971dd974e4c07159e6eef8b 404 SUPERFAMILY SSF52821 55 159 2.75E-18 T 18-10-2018 IPR036873 Rhodanese-like domain superfamily SHALO_1797 7bd81be9c6c4decff8ebb4691df3978e 536 SMART SM00283 274 535 2.1E-49 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_1797 7bd81be9c6c4decff8ebb4691df3978e 536 Pfam PF12729 Four helix bundle sensory module for signal transduction 1 176 1.2E-17 T 18-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain SHALO_1797 7bd81be9c6c4decff8ebb4691df3978e 536 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 372 399 1.2E-20 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 SHALO_1797 7bd81be9c6c4decff8ebb4691df3978e 536 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 1 13 1.2E-20 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 SHALO_1797 7bd81be9c6c4decff8ebb4691df3978e 536 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 401 430 1.2E-20 T 18-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 SHALO_1797 7bd81be9c6c4decff8ebb4691df3978e 536 SUPERFAMILY SSF58104 228 535 9.59E-60 T 18-10-2018 SHALO_1797 7bd81be9c6c4decff8ebb4691df3978e 536 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 347 452 1.4E-33 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_1797 7bd81be9c6c4decff8ebb4691df3978e 536 Gene3D G3DSA:1.10.287.950 206 536 1.2E-60 T 18-10-2018 SHALO_0490 229e20115b3acec0c99270f7fbe7e09b 279 Pfam PF00248 Aldo/keto reductase family 17 277 1.9E-30 T 18-10-2018 IPR023210 NADP-dependent oxidoreductase domain SHALO_0490 229e20115b3acec0c99270f7fbe7e09b 279 PRINTS PR00069 Aldo-keto reductase signature 139 156 3.1E-10 T 18-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SHALO_0490 229e20115b3acec0c99270f7fbe7e09b 279 PRINTS PR00069 Aldo-keto reductase signature 213 237 3.1E-10 T 18-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SHALO_0490 229e20115b3acec0c99270f7fbe7e09b 279 PRINTS PR00069 Aldo-keto reductase signature 33 57 3.1E-10 T 18-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SHALO_0490 229e20115b3acec0c99270f7fbe7e09b 279 SUPERFAMILY SSF51430 3 277 1.44E-53 T 18-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily SHALO_0490 229e20115b3acec0c99270f7fbe7e09b 279 Gene3D G3DSA:3.20.20.100 2 278 2.4E-58 T 18-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily SHALO_1985 a4c58210bd619e8ae31f894a281be21a 176 Gene3D G3DSA:2.160.10.10 1 176 1.1E-61 T 18-10-2018 SHALO_1985 a4c58210bd619e8ae31f894a281be21a 176 SUPERFAMILY SSF51161 5 173 5.27E-50 T 18-10-2018 IPR011004 Trimeric LpxA-like superfamily SHALO_1985 a4c58210bd619e8ae31f894a281be21a 176 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 95 130 1.1E-7 T 18-10-2018 IPR001451 Hexapeptide repeat SHALO_1985 a4c58210bd619e8ae31f894a281be21a 176 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 12 44 3.2E-5 T 18-10-2018 IPR001451 Hexapeptide repeat SHALO_1536 02989ecb5e0bc74a1a36c3b272e24634 132 SUPERFAMILY SSF50475 4 119 6.02E-11 T 18-10-2018 SHALO_1536 02989ecb5e0bc74a1a36c3b272e24634 132 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 20 74 1.3E-5 T 18-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 SHALO_1536 02989ecb5e0bc74a1a36c3b272e24634 132 Gene3D G3DSA:2.30.110.10 2 120 2.2E-23 T 18-10-2018 IPR012349 FMN-binding split barrel GO:0048037 SHALO_2671 77886bbfb699ae608bd78603b3f401d3 692 Pfam PF00593 TonB dependent receptor 226 663 1.2E-25 T 18-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel SHALO_2671 77886bbfb699ae608bd78603b3f401d3 692 Pfam PF07715 TonB-dependent Receptor Plug Domain 54 139 1.1E-9 T 18-10-2018 IPR012910 TonB-dependent receptor, plug domain SHALO_2671 77886bbfb699ae608bd78603b3f401d3 692 Gene3D G3DSA:2.40.170.20 158 692 1.8E-50 T 18-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily SHALO_2671 77886bbfb699ae608bd78603b3f401d3 692 SUPERFAMILY SSF56935 17 689 2.07E-65 T 18-10-2018 SHALO_2671 77886bbfb699ae608bd78603b3f401d3 692 Gene3D G3DSA:2.170.130.10 34 147 1.3E-10 T 18-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily SHALO_1663 ebec717566bd0986816e784f3082bc75 305 Hamap MF_00313 Glutaminase [glsA]. 4 305 44.489 T 18-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 SHALO_1663 ebec717566bd0986816e784f3082bc75 305 Gene3D G3DSA:3.40.710.10 2 305 1.8E-107 T 18-10-2018 SHALO_1663 ebec717566bd0986816e784f3082bc75 305 Pfam PF04960 Glutaminase 22 305 4.0E-111 T 18-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 SHALO_1663 ebec717566bd0986816e784f3082bc75 305 SUPERFAMILY SSF56601 3 305 8.09E-105 T 18-10-2018 IPR012338 Beta-lactamase/transpeptidase-like SHALO_1663 ebec717566bd0986816e784f3082bc75 305 TIGRFAM TIGR03814 Gln_ase: glutaminase A 8 305 8.3E-124 T 18-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 SHALO_0606 3f45189d4d778a194be8883f68c11411 171 Pfam PF03653 Uncharacterised protein family (UPF0093) 1 145 2.9E-48 T 18-10-2018 IPR005265 Uncharacterised protein family UPF0093 SHALO_0606 3f45189d4d778a194be8883f68c11411 171 TIGRFAM TIGR00701 TIGR00701: TIGR00701 family protein 5 145 6.7E-42 T 18-10-2018 IPR005265 Uncharacterised protein family UPF0093 SHALO_0606 3f45189d4d778a194be8883f68c11411 171 PIRSF PIRSF004638 1 148 2.6E-42 T 18-10-2018 IPR005265 Uncharacterised protein family UPF0093 SHALO_2334 4cbe19d8415a6c5a36d219a2104694be 142 Gene3D G3DSA:1.20.120.50 1 132 8.8E-29 T 18-10-2018 IPR035938 Hemerythrin-like superfamily SHALO_2334 4cbe19d8415a6c5a36d219a2104694be 142 ProSitePatterns PS00550 Hemerythrin family signature. 57 80 - T 18-10-2018 IPR016131 Haemerythrin, iron-binding site GO:0046872 SHALO_2334 4cbe19d8415a6c5a36d219a2104694be 142 SUPERFAMILY SSF47188 2 125 2.09E-27 T 18-10-2018 IPR035938 Hemerythrin-like superfamily SHALO_2334 4cbe19d8415a6c5a36d219a2104694be 142 Pfam PF01814 Hemerythrin HHE cation binding domain 14 120 2.9E-10 T 18-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 SHALO_2334 4cbe19d8415a6c5a36d219a2104694be 142 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 4 126 2.3E-29 T 18-10-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 SHALO_1177 89dfee0b9e5dc2bff9b2bbdbaa3bf971 525 SUPERFAMILY SSF81442 12 391 5.1E-10 T 18-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_1177 89dfee0b9e5dc2bff9b2bbdbaa3bf971 525 Gene3D G3DSA:1.20.210.10 5 395 9.1E-14 T 18-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_1177 89dfee0b9e5dc2bff9b2bbdbaa3bf971 525 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 11 361 3.8E-10 T 18-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_2478 c5d67cc9447f072a85b88748fbf7933d 97 Gene3D G3DSA:2.60.40.10 3 97 3.2E-20 T 18-10-2018 IPR013783 Immunoglobulin-like fold SHALO_2478 c5d67cc9447f072a85b88748fbf7933d 97 TIGRFAM TIGR04490 SoxZ_true: thiosulfate oxidation carrier complex protein SoxZ 5 94 6.1E-28 T 18-10-2018 IPR030995 Thiosulfate oxidation carrier complex protein SoxZ SHALO_2478 c5d67cc9447f072a85b88748fbf7933d 97 SUPERFAMILY SSF81296 7 96 7.7E-19 T 18-10-2018 IPR014756 Immunoglobulin E-set SHALO_2478 c5d67cc9447f072a85b88748fbf7933d 97 Pfam PF08770 Sulphur oxidation protein SoxZ 7 94 4.5E-26 T 18-10-2018 IPR014880 Sulphur oxidation protein SoxZ SHALO_1058 5ebdd620116a4e115ace35ba9d158525 236 Pfam PF06738 Putative threonine/serine exporter 1 230 3.4E-52 T 18-10-2018 IPR010619 Putative threonine/serine exporter SHALO_1904 0271d865891e12e70bb10eef72cc576d 162 TIGRFAM TIGR02087 LEUD_arch: 3-isopropylmalate dehydratase, small subunit 6 158 5.8E-64 T 18-10-2018 IPR011827 Hydrolyase LeuD/HacB/DmdB GO:0016836 KEGG: 00290+4.2.1.33 SHALO_1904 0271d865891e12e70bb10eef72cc576d 162 Hamap MF_01032 Methanogen homoaconitase small subunit [hacB]. 4 161 38.373 T 18-10-2018 IPR011827 Hydrolyase LeuD/HacB/DmdB GO:0016836 KEGG: 00290+4.2.1.33 SHALO_1904 0271d865891e12e70bb10eef72cc576d 162 Gene3D G3DSA:3.20.19.10 1 162 1.1E-60 T 18-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 SHALO_1904 0271d865891e12e70bb10eef72cc576d 162 SUPERFAMILY SSF52016 2 160 7.85E-50 T 18-10-2018 SHALO_1904 0271d865891e12e70bb10eef72cc576d 162 Pfam PF00694 Aconitase C-terminal domain 45 101 4.0E-21 T 18-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 SHALO_0601 623f5037fab0157bb7ac54d82090ba58 291 SUPERFAMILY SSF52540 69 256 7.97E-10 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0601 623f5037fab0157bb7ac54d82090ba58 291 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 31 264 2.7E-66 T 18-10-2018 IPR022488 Polyphosphate kinase-2-related SHALO_0601 623f5037fab0157bb7ac54d82090ba58 291 TIGRFAM TIGR03709 PPK2_rel_1: polyphosphate:nucleotide phosphotransferase, PPK2 family 6 279 1.4E-119 T 18-10-2018 IPR022300 Polyphosphate:nucleotide phosphotransferase, PPK2 GO:0006797|GO:0016776 KEGG: 00190+2.7.4.1 SHALO_0601 623f5037fab0157bb7ac54d82090ba58 291 Gene3D G3DSA:3.40.50.300 2 286 4.9E-108 T 18-10-2018 SHALO_0601 623f5037fab0157bb7ac54d82090ba58 291 PIRSF PIRSF028756 3 291 9.1E-83 T 18-10-2018 IPR016898 Polyphosphate kinase 2 KEGG: 00190+2.7.4.1 SHALO_0295 b65d78adbd25ba4eb5483623c9ef91fb 142 SUPERFAMILY SSF75420 7 78 5.36E-17 T 18-10-2018 IPR035956 RimP, N-terminal domain superfamily SHALO_0295 b65d78adbd25ba4eb5483623c9ef91fb 142 Pfam PF17384 RimP C-terminal SH3 domain 81 142 1.2E-8 T 18-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal SHALO_0295 b65d78adbd25ba4eb5483623c9ef91fb 142 Gene3D G3DSA:3.30.300.70 3 75 9.7E-16 T 18-10-2018 IPR035956 RimP, N-terminal domain superfamily SHALO_0295 b65d78adbd25ba4eb5483623c9ef91fb 142 SUPERFAMILY SSF74942 79 142 3.4E-9 T 18-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily SHALO_0295 b65d78adbd25ba4eb5483623c9ef91fb 142 Pfam PF02576 RimP N-terminal domain 7 78 1.4E-19 T 18-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal SHALO_0295 b65d78adbd25ba4eb5483623c9ef91fb 142 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 5 142 19.305 T 18-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 SHALO_0788 f3668b479caa0ea656be256fb424501c 214 SUPERFAMILY SSF52172 1 119 2.42E-28 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_0788 f3668b479caa0ea656be256fb424501c 214 Gene3D G3DSA:3.40.50.2300 1 122 6.3E-30 T 18-10-2018 SHALO_0788 f3668b479caa0ea656be256fb424501c 214 SMART SM00862 142 212 6.6E-11 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_0788 f3668b479caa0ea656be256fb424501c 214 SUPERFAMILY SSF46894 129 212 6.24E-14 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHALO_0788 f3668b479caa0ea656be256fb424501c 214 Pfam PF00072 Response regulator receiver domain 3 111 6.9E-22 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_0788 f3668b479caa0ea656be256fb424501c 214 Pfam PF00486 Transcriptional regulatory protein, C terminal 144 212 4.3E-13 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_0788 f3668b479caa0ea656be256fb424501c 214 Gene3D G3DSA:1.10.10.10 125 214 4.4E-15 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_0788 f3668b479caa0ea656be256fb424501c 214 SMART SM00448 1 111 6.6E-28 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_1419 fa7447597d8fa51806123b4159e1096c 745 Gene3D G3DSA:3.40.718.10 407 651 2.4E-6 T 18-10-2018 SHALO_1419 fa7447597d8fa51806123b4159e1096c 745 Gene3D G3DSA:3.40.718.10 115 343 2.6E-6 T 18-10-2018 SHALO_1419 fa7447597d8fa51806123b4159e1096c 745 PIRSF PIRSF009407 1 744 0.0 T 18-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 SHALO_1419 fa7447597d8fa51806123b4159e1096c 745 SUPERFAMILY SSF53659 5 743 0.0 T 18-10-2018 SHALO_1419 fa7447597d8fa51806123b4159e1096c 745 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 2 744 0.0 T 18-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 SHALO_1419 fa7447597d8fa51806123b4159e1096c 745 Pfam PF03971 Monomeric isocitrate dehydrogenase 7 741 0.0 T 18-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 SHALO_2863 e5762bad1efc3417fc11409f81eb0ea6 354 SUPERFAMILY SSF49344 45 186 8.63E-9 T 18-10-2018 SHALO_2863 e5762bad1efc3417fc11409f81eb0ea6 354 Gene3D G3DSA:2.60.40.1190 35 131 4.1E-5 T 18-10-2018 SHALO_2863 e5762bad1efc3417fc11409f81eb0ea6 354 Pfam PF09459 Ethylbenzene dehydrogenase 49 346 3.5E-50 T 18-10-2018 IPR019020 Cytochrome c-552/DMSO reductase-like, haem-binding domain GO:0020037 SHALO_2863 e5762bad1efc3417fc11409f81eb0ea6 354 SMART SM00887 48 347 1.7E-47 T 18-10-2018 IPR019020 Cytochrome c-552/DMSO reductase-like, haem-binding domain GO:0020037 SHALO_0565 22a0aa8a57beda4379f98aff9ab87aa0 634 SMART SM00267 215 385 1.3E-41 T 18-10-2018 IPR000160 GGDEF domain SHALO_0565 22a0aa8a57beda4379f98aff9ab87aa0 634 Pfam PF00990 Diguanylate cyclase, GGDEF domain 226 381 2.3E-35 T 18-10-2018 IPR000160 GGDEF domain SHALO_0565 22a0aa8a57beda4379f98aff9ab87aa0 634 SMART SM00052 393 633 7.8E-38 T 18-10-2018 IPR001633 EAL domain SHALO_0565 22a0aa8a57beda4379f98aff9ab87aa0 634 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 224 384 3.1E-41 T 18-10-2018 IPR000160 GGDEF domain SHALO_0565 22a0aa8a57beda4379f98aff9ab87aa0 634 Gene3D G3DSA:3.20.20.450 396 634 5.8E-58 T 18-10-2018 IPR035919 EAL domain superfamily SHALO_0565 22a0aa8a57beda4379f98aff9ab87aa0 634 Pfam PF00563 EAL domain 399 628 3.0E-52 T 18-10-2018 IPR001633 EAL domain SHALO_0565 22a0aa8a57beda4379f98aff9ab87aa0 634 SUPERFAMILY SSF55073 231 387 1.57E-36 T 18-10-2018 IPR029787 Nucleotide cyclase SHALO_0565 22a0aa8a57beda4379f98aff9ab87aa0 634 Gene3D G3DSA:3.30.70.270 221 393 6.4E-42 T 18-10-2018 SHALO_0565 22a0aa8a57beda4379f98aff9ab87aa0 634 SUPERFAMILY SSF141868 399 631 4.58E-56 T 18-10-2018 IPR035919 EAL domain superfamily SHALO_0149 63383d4664cdc7ae92dd6a6c1925b4fe 199 Pfam PF01625 Peptide methionine sulfoxide reductase 30 179 2.6E-67 T 18-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 SHALO_0149 63383d4664cdc7ae92dd6a6c1925b4fe 199 Gene3D G3DSA:3.30.1060.10 8 188 3.0E-76 T 18-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 SHALO_0149 63383d4664cdc7ae92dd6a6c1925b4fe 199 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 28 179 8.2E-63 T 18-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 SHALO_0149 63383d4664cdc7ae92dd6a6c1925b4fe 199 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 27 184 38.345 T 18-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 SHALO_0149 63383d4664cdc7ae92dd6a6c1925b4fe 199 SUPERFAMILY SSF55068 11 190 3.4E-79 T 18-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 SHALO_0047 becfbe603184149ba7382167e3a4a0a9 266 Gene3D G3DSA:1.10.10.60 210 261 2.1E-10 T 18-10-2018 SHALO_0047 becfbe603184149ba7382167e3a4a0a9 266 SUPERFAMILY SSF51215 19 141 4.84E-11 T 18-10-2018 IPR037923 Transcription regulator HTH-like SHALO_0047 becfbe603184149ba7382167e3a4a0a9 266 SMART SM00342 175 257 9.9E-26 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_0047 becfbe603184149ba7382167e3a4a0a9 266 SUPERFAMILY SSF46689 212 259 4.93E-7 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SHALO_0047 becfbe603184149ba7382167e3a4a0a9 266 Gene3D G3DSA:1.10.10.60 154 209 3.2E-16 T 18-10-2018 SHALO_0047 becfbe603184149ba7382167e3a4a0a9 266 SUPERFAMILY SSF46689 160 208 1.42E-12 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SHALO_0047 becfbe603184149ba7382167e3a4a0a9 266 Pfam PF12833 Helix-turn-helix domain 181 258 1.2E-19 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_0047 becfbe603184149ba7382167e3a4a0a9 266 Pfam PF02311 AraC-like ligand binding domain 18 136 2.0E-9 T 18-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 SHALO_0701 2b858014e2bbb2cb8f9451405659435b 119 SUPERFAMILY SSF109635 1 80 3.27E-16 T 18-10-2018 IPR037187 DksA, N-terminal domain superfamily SHALO_0701 2b858014e2bbb2cb8f9451405659435b 119 Gene3D G3DSA:1.20.120.910 1 119 1.3E-32 T 18-10-2018 SHALO_0701 2b858014e2bbb2cb8f9451405659435b 119 SUPERFAMILY SSF57716 81 116 1.71E-8 T 18-10-2018 SHALO_0701 2b858014e2bbb2cb8f9451405659435b 119 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 84 108 - T 18-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site SHALO_0701 2b858014e2bbb2cb8f9451405659435b 119 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 79 114 7.0E-12 T 18-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 SHALO_2468 bdcb1f48f3e5c60eebd0503ea92fad28 659 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 407 562 1.3E-47 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_2468 bdcb1f48f3e5c60eebd0503ea92fad28 659 SMART SM00283 347 594 2.4E-71 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_2468 bdcb1f48f3e5c60eebd0503ea92fad28 659 Gene3D G3DSA:1.10.287.950 332 594 2.1E-67 T 18-10-2018 SHALO_2468 bdcb1f48f3e5c60eebd0503ea92fad28 659 SUPERFAMILY SSF58104 355 595 8.24E-60 T 18-10-2018 SHALO_2834 c084d9672c6f53b7211b81556a577f58 221 Pfam PF00881 Nitroreductase family 8 196 2.0E-29 T 18-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 SHALO_2834 c084d9672c6f53b7211b81556a577f58 221 Gene3D G3DSA:3.40.109.10 1 221 4.1E-64 T 18-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 SHALO_2834 c084d9672c6f53b7211b81556a577f58 221 SUPERFAMILY SSF55469 1 219 1.83E-44 T 18-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 SHALO_0145 10e24849bb49a387dce2124d547c4c20 198 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 29 190 1.5E-10 T 18-10-2018 IPR005586 ABC-type transport auxiliary lipoprotein component SHALO_0145 10e24849bb49a387dce2124d547c4c20 198 Gene3D G3DSA:3.40.50.10610 22 198 3.6E-26 T 18-10-2018 SHALO_0145 10e24849bb49a387dce2124d547c4c20 198 SUPERFAMILY SSF159594 28 195 2.35E-27 T 18-10-2018 SHALO_0447 ad1656d3b15a32649053e4f1b0bd644c 134 Gene3D G3DSA:3.10.490.10 4 133 8.1E-13 T 18-10-2018 SHALO_0447 ad1656d3b15a32649053e4f1b0bd644c 134 SUPERFAMILY SSF110857 9 100 2.16E-6 T 18-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily SHALO_2260 94f8a8ba623f7e4a7103f5eb37448d1f 650 Pfam PF14827 Double sensory domain of two-component sensor kinase 43 283 1.3E-36 T 18-10-2018 IPR029150 Double Cache domain 3 SHALO_2260 94f8a8ba623f7e4a7103f5eb37448d1f 650 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 467 576 9.7E-34 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_2260 94f8a8ba623f7e4a7103f5eb37448d1f 650 SMART SM00304 319 373 1.1E-7 T 18-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 SHALO_2260 94f8a8ba623f7e4a7103f5eb37448d1f 650 SMART SM00283 381 649 2.7E-44 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_2260 94f8a8ba623f7e4a7103f5eb37448d1f 650 Gene3D G3DSA:1.10.287.950 318 650 1.7E-60 T 18-10-2018 SHALO_2260 94f8a8ba623f7e4a7103f5eb37448d1f 650 SUPERFAMILY SSF103190 57 179 8.24E-10 T 18-10-2018 IPR029151 Periplasmic sensor-like domain superfamily SHALO_2260 94f8a8ba623f7e4a7103f5eb37448d1f 650 SUPERFAMILY SSF58104 341 649 8.24E-58 T 18-10-2018 SHALO_2166 3072cc5d267ba7df21a3609ec40f777e 259 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 19 81 4.2E-14 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SHALO_2166 3072cc5d267ba7df21a3609ec40f777e 259 SUPERFAMILY SSF50331 193 258 9.96E-17 T 18-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal SHALO_2166 3072cc5d267ba7df21a3609ec40f777e 259 SUPERFAMILY SSF50331 121 187 1.04E-17 T 18-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal SHALO_2166 3072cc5d267ba7df21a3609ec40f777e 259 Gene3D G3DSA:1.10.10.10 8 116 4.7E-27 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_2166 3072cc5d267ba7df21a3609ec40f777e 259 Gene3D G3DSA:2.40.50.100 179 188 3.4E-21 T 18-10-2018 SHALO_2166 3072cc5d267ba7df21a3609ec40f777e 259 PIRSF PIRSF005763 8 259 5.3E-77 T 18-10-2018 IPR016462 Molybdate-dependent transcriptional regulator ModE GO:0006355|GO:0015689|GO:0030151 SHALO_2166 3072cc5d267ba7df21a3609ec40f777e 259 Gene3D G3DSA:2.40.50.100 117 178 3.4E-21 T 18-10-2018 SHALO_2166 3072cc5d267ba7df21a3609ec40f777e 259 SUPERFAMILY SSF46785 18 102 3.48E-23 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SHALO_2166 3072cc5d267ba7df21a3609ec40f777e 259 Gene3D G3DSA:2.40.50.100 193 259 8.9E-20 T 18-10-2018 SHALO_2166 3072cc5d267ba7df21a3609ec40f777e 259 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 121 187 9.3E-19 T 18-10-2018 IPR004606 Molybdenum-pterin binding GO:0015689 SHALO_2166 3072cc5d267ba7df21a3609ec40f777e 259 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 194 258 1.1E-16 T 18-10-2018 IPR004606 Molybdenum-pterin binding GO:0015689 SHALO_2166 3072cc5d267ba7df21a3609ec40f777e 259 Pfam PF03459 TOBE domain 194 255 3.0E-11 T 18-10-2018 IPR005116 Transport-associated OB, type 1 SHALO_2166 3072cc5d267ba7df21a3609ec40f777e 259 Pfam PF03459 TOBE domain 124 185 6.6E-11 T 18-10-2018 IPR005116 Transport-associated OB, type 1 SHALO_1074 f157c376671b068986a6c925030fc7fd 170 Gene3D G3DSA:1.20.1260.10 1 144 5.2E-29 T 18-10-2018 IPR012347 Ferritin-like SHALO_1074 f157c376671b068986a6c925030fc7fd 170 Pfam PF02915 Rubrerythrin 5 139 2.7E-11 T 18-10-2018 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 SHALO_1074 f157c376671b068986a6c925030fc7fd 170 SUPERFAMILY SSF47240 4 149 6.82E-25 T 18-10-2018 IPR009078 Ferritin-like superfamily SHALO_0988 a57890c41d2418153f95b734e926d6b6 734 Gene3D G3DSA:3.30.450.20 412 526 7.4E-25 T 18-10-2018 SHALO_0988 a57890c41d2418153f95b734e926d6b6 734 Pfam PF00072 Response regulator receiver domain 140 251 4.1E-14 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_0988 a57890c41d2418153f95b734e926d6b6 734 Pfam PF00072 Response regulator receiver domain 17 121 9.5E-10 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_0988 a57890c41d2418153f95b734e926d6b6 734 Pfam PF01966 HD domain 554 676 3.0E-21 T 18-10-2018 IPR006674 HD domain SHALO_0988 a57890c41d2418153f95b734e926d6b6 734 Gene3D G3DSA:3.30.450.20 269 411 1.0E-31 T 18-10-2018 SHALO_0988 a57890c41d2418153f95b734e926d6b6 734 SUPERFAMILY SSF55785 283 382 7.68E-30 T 18-10-2018 IPR035965 PAS domain superfamily SHALO_0988 a57890c41d2418153f95b734e926d6b6 734 Gene3D G3DSA:1.10.3210.10 528 730 1.8E-71 T 18-10-2018 SHALO_0988 a57890c41d2418153f95b734e926d6b6 734 SMART SM00448 15 125 7.2E-4 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_0988 a57890c41d2418153f95b734e926d6b6 734 SMART SM00448 138 251 1.2E-11 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_0988 a57890c41d2418153f95b734e926d6b6 734 Gene3D G3DSA:3.40.50.2300 15 134 4.2E-13 T 18-10-2018 SHALO_0988 a57890c41d2418153f95b734e926d6b6 734 SMART SM00471 549 686 9.9E-11 T 18-10-2018 IPR003607 HD/PDEase domain SHALO_0988 a57890c41d2418153f95b734e926d6b6 734 SUPERFAMILY SSF52172 16 129 1.14E-13 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_0988 a57890c41d2418153f95b734e926d6b6 734 SMART SM00086 343 385 9.1E-6 T 18-10-2018 IPR001610 PAC motif SHALO_0988 a57890c41d2418153f95b734e926d6b6 734 SMART SM00086 482 524 0.0031 T 18-10-2018 IPR001610 PAC motif SHALO_0988 a57890c41d2418153f95b734e926d6b6 734 SUPERFAMILY SSF55785 424 522 3.14E-25 T 18-10-2018 IPR035965 PAS domain superfamily SHALO_0988 a57890c41d2418153f95b734e926d6b6 734 SUPERFAMILY SSF109604 535 714 1.22E-38 T 18-10-2018 SHALO_0988 a57890c41d2418153f95b734e926d6b6 734 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 274 388 1.3E-18 T 18-10-2018 IPR000014 PAS domain SHALO_0988 a57890c41d2418153f95b734e926d6b6 734 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 411 531 8.4E-19 T 18-10-2018 IPR000014 PAS domain SHALO_0988 a57890c41d2418153f95b734e926d6b6 734 SMART SM00091 408 476 0.028 T 18-10-2018 IPR000014 PAS domain SHALO_0988 a57890c41d2418153f95b734e926d6b6 734 SMART SM00091 269 338 0.006 T 18-10-2018 IPR000014 PAS domain SHALO_0988 a57890c41d2418153f95b734e926d6b6 734 Pfam PF08447 PAS fold 294 378 1.3E-15 T 18-10-2018 IPR013655 PAS fold-3 GO:0005515 SHALO_0988 a57890c41d2418153f95b734e926d6b6 734 Pfam PF08447 PAS fold 433 514 3.5E-12 T 18-10-2018 IPR013655 PAS fold-3 GO:0005515 SHALO_0988 a57890c41d2418153f95b734e926d6b6 734 Gene3D G3DSA:3.40.50.2300 135 268 1.4E-20 T 18-10-2018 SHALO_0988 a57890c41d2418153f95b734e926d6b6 734 SUPERFAMILY SSF52172 139 272 3.27E-22 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_2041 681babfec0bece9ca13c31d502875ea6 157 SUPERFAMILY SSF52255 1 150 3.4E-56 T 18-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 SHALO_2041 681babfec0bece9ca13c31d502875ea6 157 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 1 151 1.4E-54 T 18-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 SHALO_2041 681babfec0bece9ca13c31d502875ea6 157 Gene3D G3DSA:3.40.50.7700 1 154 1.4E-59 T 18-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 SHALO_2041 681babfec0bece9ca13c31d502875ea6 157 Pfam PF00731 AIR carboxylase 1 139 7.3E-54 T 18-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 SHALO_2041 681babfec0bece9ca13c31d502875ea6 157 PIRSF PIRSF001338 1 156 3.1E-58 T 18-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 SHALO_2041 681babfec0bece9ca13c31d502875ea6 157 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 1 150 26.835 T 18-10-2018 IPR033747 Class I PurE SHALO_2041 681babfec0bece9ca13c31d502875ea6 157 SMART SM01001 1 146 2.3E-82 T 18-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 SHALO_1371 b592fc3f925a39a108ed26041d84a160 251 Pfam PF09674 Protein of unknown function (DUF2400) 29 247 7.2E-65 T 18-10-2018 IPR014127 Conserved hypothetical protein CHP02757 SHALO_1371 b592fc3f925a39a108ed26041d84a160 251 TIGRFAM TIGR02757 TIGR02757: TIGR02757 family protein 26 248 7.9E-74 T 18-10-2018 IPR014127 Conserved hypothetical protein CHP02757 SHALO_1402 e69ae159e83d01e75b5e50cd7c5a6224 225 Gene3D G3DSA:1.20.950.20 2 205 6.2E-53 T 18-10-2018 SHALO_1402 e69ae159e83d01e75b5e50cd7c5a6224 225 SUPERFAMILY SSF81342 8 225 2.04E-33 T 18-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 SHALO_1402 e69ae159e83d01e75b5e50cd7c5a6224 225 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 11 34 4.1E-26 T 18-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 SHALO_1402 e69ae159e83d01e75b5e50cd7c5a6224 225 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 207 220 4.1E-26 T 18-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 SHALO_1402 e69ae159e83d01e75b5e50cd7c5a6224 225 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 176 198 4.1E-26 T 18-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 SHALO_1402 e69ae159e83d01e75b5e50cd7c5a6224 225 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 126 145 4.1E-26 T 18-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 SHALO_1402 e69ae159e83d01e75b5e50cd7c5a6224 225 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 50 74 4.1E-26 T 18-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 SHALO_1402 e69ae159e83d01e75b5e50cd7c5a6224 225 ProSitePatterns PS00882 Nickel-dependent hydrogenases b-type cytochrome subunit signature 1. 14 31 - T 18-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 SHALO_1402 e69ae159e83d01e75b5e50cd7c5a6224 225 Pfam PF01292 Prokaryotic cytochrome b561 9 215 2.5E-27 T 18-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 SHALO_1402 e69ae159e83d01e75b5e50cd7c5a6224 225 TIGRFAM TIGR02125 CytB-hydogenase: Ni/Fe-hydrogenase, b-type cytochrome subunit 8 220 9.9E-75 T 18-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 SHALO_2558 f19803052a1430cea54e80fbf1af865f 168 SUPERFAMILY SSF160387 66 132 1.67E-7 T 18-10-2018 SHALO_0151 97266d428564a858f30b490135259c3c 563 SMART SM00283 308 562 6.5E-42 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_0151 97266d428564a858f30b490135259c3c 563 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 379 500 2.8E-34 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_0151 97266d428564a858f30b490135259c3c 563 Pfam PF08269 Cache domain 33 214 6.8E-39 T 18-10-2018 IPR004010 Double Cache domain 2 SHALO_0151 97266d428564a858f30b490135259c3c 563 Gene3D G3DSA:3.30.450.20 29 209 2.0E-44 T 18-10-2018 SHALO_0151 97266d428564a858f30b490135259c3c 563 Gene3D G3DSA:1.10.287.950 231 563 2.6E-60 T 18-10-2018 SHALO_0151 97266d428564a858f30b490135259c3c 563 SMART SM00304 232 286 5.3E-9 T 18-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 SHALO_0151 97266d428564a858f30b490135259c3c 563 SMART SM01049 42 138 1.6E-17 T 18-10-2018 IPR033480 Single Cache domain 2 SHALO_0151 97266d428564a858f30b490135259c3c 563 SUPERFAMILY SSF58104 254 562 7.72E-58 T 18-10-2018 SHALO_0151 97266d428564a858f30b490135259c3c 563 Pfam PF00672 HAMP domain 232 281 1.3E-6 T 18-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 SHALO_2574 d27416f30d3b623e5a1c91f865ea7f12 509 SUPERFAMILY SSF55874 343 508 9.82E-32 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_2574 d27416f30d3b623e5a1c91f865ea7f12 509 SMART SM00091 147 213 2.2E-11 T 18-10-2018 IPR000014 PAS domain SHALO_2574 d27416f30d3b623e5a1c91f865ea7f12 509 SMART SM00091 4 72 5.0E-9 T 18-10-2018 IPR000014 PAS domain SHALO_2574 d27416f30d3b623e5a1c91f865ea7f12 509 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 396 507 1.1E-15 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_2574 d27416f30d3b623e5a1c91f865ea7f12 509 SUPERFAMILY SSF55785 6 113 1.03E-19 T 18-10-2018 IPR035965 PAS domain superfamily SHALO_2574 d27416f30d3b623e5a1c91f865ea7f12 509 Gene3D G3DSA:1.10.287.130 267 351 8.3E-13 T 18-10-2018 SHALO_2574 d27416f30d3b623e5a1c91f865ea7f12 509 SMART SM00387 393 509 1.4E-19 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_2574 d27416f30d3b623e5a1c91f865ea7f12 509 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 4 111 7.5E-16 T 18-10-2018 IPR000014 PAS domain SHALO_2574 d27416f30d3b623e5a1c91f865ea7f12 509 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 143 265 1.0E-24 T 18-10-2018 IPR000014 PAS domain SHALO_2574 d27416f30d3b623e5a1c91f865ea7f12 509 Pfam PF13426 PAS domain 159 260 1.1E-9 T 18-10-2018 IPR000014 PAS domain SHALO_2574 d27416f30d3b623e5a1c91f865ea7f12 509 SUPERFAMILY SSF47384 273 352 1.96E-9 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SHALO_2574 d27416f30d3b623e5a1c91f865ea7f12 509 Pfam PF08448 PAS fold 11 116 3.8E-10 T 18-10-2018 IPR013656 PAS fold-4 SHALO_2574 d27416f30d3b623e5a1c91f865ea7f12 509 SMART SM00388 283 353 0.0099 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_2574 d27416f30d3b623e5a1c91f865ea7f12 509 Gene3D G3DSA:3.30.565.10 352 509 1.1E-30 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_2574 d27416f30d3b623e5a1c91f865ea7f12 509 Gene3D G3DSA:3.30.450.20 6 116 1.9E-20 T 18-10-2018 SHALO_2574 d27416f30d3b623e5a1c91f865ea7f12 509 Gene3D G3DSA:3.30.450.20 136 259 5.6E-23 T 18-10-2018 SHALO_2574 d27416f30d3b623e5a1c91f865ea7f12 509 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 462 5.1E-9 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_2574 d27416f30d3b623e5a1c91f865ea7f12 509 PRINTS PR00344 Bacterial sensor protein C-terminal signature 465 483 5.1E-9 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_2574 d27416f30d3b623e5a1c91f865ea7f12 509 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 448 5.1E-9 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_2574 d27416f30d3b623e5a1c91f865ea7f12 509 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 507 5.1E-9 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_2574 d27416f30d3b623e5a1c91f865ea7f12 509 SUPERFAMILY SSF55785 138 259 7.41E-22 T 18-10-2018 IPR035965 PAS domain superfamily SHALO_1253 88c796638fed3125a7e3fda44a447c27 284 SUPERFAMILY SSF56752 1 278 1.14E-70 T 18-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 SHALO_1253 88c796638fed3125a7e3fda44a447c27 284 Gene3D G3DSA:3.30.470.10 1 117 3.1E-29 T 18-10-2018 SHALO_1253 88c796638fed3125a7e3fda44a447c27 284 Gene3D G3DSA:3.20.10.10 123 283 4.6E-53 T 18-10-2018 SHALO_1253 88c796638fed3125a7e3fda44a447c27 284 Pfam PF01063 Amino-transferase class IV 31 253 5.1E-40 T 18-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 SHALO_0167 927b1707d48a339ff0ce8a61a4aff0cb 321 Gene3D G3DSA:1.10.3720.10 110 318 9.6E-53 T 18-10-2018 IPR035906 MetI-like superfamily SHALO_0167 927b1707d48a339ff0ce8a61a4aff0cb 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 138 316 4.1E-18 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 SHALO_0167 927b1707d48a339ff0ce8a61a4aff0cb 321 SUPERFAMILY SSF161098 117 307 1.06E-43 T 18-10-2018 IPR035906 MetI-like superfamily SHALO_0167 927b1707d48a339ff0ce8a61a4aff0cb 321 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 114 210 6.1E-25 T 18-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 SHALO_0023 e1a7790f5de3291f47c5ba8dbca30d8d 441 SUPERFAMILY SSF56349 201 422 3.53E-28 T 18-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SHALO_0023 e1a7790f5de3291f47c5ba8dbca30d8d 441 Gene3D G3DSA:1.10.443.10 263 438 4.9E-18 T 18-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 SHALO_0023 e1a7790f5de3291f47c5ba8dbca30d8d 441 Gene3D G3DSA:1.10.150.130 123 262 8.7E-6 T 18-10-2018 IPR010998 Integrase/recombinase, N-terminal SHALO_0023 e1a7790f5de3291f47c5ba8dbca30d8d 441 Pfam PF00589 Phage integrase family 277 422 5.3E-9 T 18-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SHALO_2268 7cb35afc84c0e5aa4ac4e50681ded047 625 SMART SM00387 515 624 1.5E-16 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_2268 7cb35afc84c0e5aa4ac4e50681ded047 625 Gene3D G3DSA:1.10.287.130 382 470 1.1E-9 T 18-10-2018 SHALO_2268 7cb35afc84c0e5aa4ac4e50681ded047 625 SUPERFAMILY SSF47384 399 473 1.24E-5 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SHALO_2268 7cb35afc84c0e5aa4ac4e50681ded047 625 PRINTS PR00344 Bacterial sensor protein C-terminal signature 557 571 9.5E-9 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_2268 7cb35afc84c0e5aa4ac4e50681ded047 625 PRINTS PR00344 Bacterial sensor protein C-terminal signature 575 585 9.5E-9 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_2268 7cb35afc84c0e5aa4ac4e50681ded047 625 PRINTS PR00344 Bacterial sensor protein C-terminal signature 588 606 9.5E-9 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_2268 7cb35afc84c0e5aa4ac4e50681ded047 625 Gene3D G3DSA:3.30.450.20 196 317 3.6E-35 T 18-10-2018 SHALO_2268 7cb35afc84c0e5aa4ac4e50681ded047 625 SUPERFAMILY SSF55874 473 621 1.44E-26 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_2268 7cb35afc84c0e5aa4ac4e50681ded047 625 SMART SM01049 189 256 2.5E-6 T 18-10-2018 IPR033480 Single Cache domain 2 SHALO_2268 7cb35afc84c0e5aa4ac4e50681ded047 625 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 519 623 3.8E-16 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_2268 7cb35afc84c0e5aa4ac4e50681ded047 625 Pfam PF08269 Cache domain 39 310 3.9E-48 T 18-10-2018 IPR004010 Double Cache domain 2 SHALO_2268 7cb35afc84c0e5aa4ac4e50681ded047 625 Gene3D G3DSA:3.30.565.10 475 625 3.4E-29 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_0178 452911cbbc6fbae7f2f5cd8216973f55 280 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 69 77 - T 18-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 SHALO_0178 452911cbbc6fbae7f2f5cd8216973f55 280 Pfam PF01261 Xylose isomerase-like TIM barrel 21 238 1.0E-36 T 18-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain SHALO_0178 452911cbbc6fbae7f2f5cd8216973f55 280 Gene3D G3DSA:3.20.20.150 1 279 5.9E-107 T 18-10-2018 SHALO_0178 452911cbbc6fbae7f2f5cd8216973f55 280 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 3 276 6.3E-104 T 18-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 SHALO_0178 452911cbbc6fbae7f2f5cd8216973f55 280 SUPERFAMILY SSF51658 1 279 2.49E-95 T 18-10-2018 IPR036237 Xylose isomerase-like superfamily SHALO_0178 452911cbbc6fbae7f2f5cd8216973f55 280 SMART SM00518 3 279 1.3E-117 T 18-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 SHALO_0178 452911cbbc6fbae7f2f5cd8216973f55 280 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 215 231 - T 18-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 SHALO_0178 452911cbbc6fbae7f2f5cd8216973f55 280 Hamap MF_00152 Probable endonuclease 4 [nfo]. 2 279 41.533 T 18-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 SHALO_0178 452911cbbc6fbae7f2f5cd8216973f55 280 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 175 182 - T 18-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 SHALO_0034 6e3d9b0b9d166b925152a4b0018c9025 219 SUPERFAMILY SSF52833 26 217 7.84E-31 T 18-10-2018 IPR036249 Thioredoxin-like superfamily SHALO_0034 6e3d9b0b9d166b925152a4b0018c9025 219 Pfam PF01323 DSBA-like thioredoxin domain 47 198 7.5E-10 T 18-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 SHALO_0034 6e3d9b0b9d166b925152a4b0018c9025 219 PIRSF PIRSF001488 7 219 3.8E-27 T 18-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL SHALO_0034 6e3d9b0b9d166b925152a4b0018c9025 219 Gene3D G3DSA:3.40.30.10 24 219 3.2E-50 T 18-10-2018 SHALO_1338 db4405bc6966f794b9824f0ade5a6d52 218 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 160 212 7.5E-6 T 18-10-2018 IPR039536 Transcriptional regulator TetR, C-terminal, Proteobacteria type SHALO_1338 db4405bc6966f794b9824f0ade5a6d52 218 Gene3D G3DSA:1.10.357.10 73 216 6.6E-22 T 18-10-2018 SHALO_1338 db4405bc6966f794b9824f0ade5a6d52 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 47 70 2.3E-9 T 18-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SHALO_1338 db4405bc6966f794b9824f0ade5a6d52 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 26 39 2.3E-9 T 18-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SHALO_1338 db4405bc6966f794b9824f0ade5a6d52 218 Gene3D G3DSA:1.10.10.60 10 72 7.8E-21 T 18-10-2018 SHALO_1338 db4405bc6966f794b9824f0ade5a6d52 218 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 71 7.5E-16 T 18-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SHALO_1338 db4405bc6966f794b9824f0ade5a6d52 218 SUPERFAMILY SSF46689 16 85 3.74E-18 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SHALO_2068 da29775483b320c3e745eae3230d4010 144 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 18-10-2018 IPR019776 Flagellar basal body rod protein, conserved site SHALO_2068 da29775483b320c3e745eae3230d4010 144 PIRSF PIRSF002889 1 141 1.4E-36 T 18-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 SHALO_2068 da29775483b320c3e745eae3230d4010 144 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 8 138 3.6E-31 T 18-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 SHALO_2068 da29775483b320c3e745eae3230d4010 144 Pfam PF00460 Flagella basal body rod protein 15 39 9.8E-7 T 18-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 SHALO_1861 b37a024910b244923d83742bd85ec87b 406 Gene3D G3DSA:1.10.287.130 148 266 2.7E-6 T 18-10-2018 SHALO_1861 b37a024910b244923d83742bd85ec87b 406 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 312 395 2.4E-7 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_1861 b37a024910b244923d83742bd85ec87b 406 Gene3D G3DSA:3.30.565.10 268 404 2.6E-8 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_1861 b37a024910b244923d83742bd85ec87b 406 SUPERFAMILY SSF55874 268 394 1.66E-12 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_0413 696d320ecd5f4068ee34725a546f5db1 78 SUPERFAMILY SSF47413 3 75 2.92E-11 T 18-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 SHALO_0413 696d320ecd5f4068ee34725a546f5db1 78 Pfam PF12844 Helix-turn-helix domain 11 71 1.4E-7 T 18-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SHALO_0413 696d320ecd5f4068ee34725a546f5db1 78 Gene3D G3DSA:1.10.260.40 3 77 2.8E-11 T 18-10-2018 SHALO_0413 696d320ecd5f4068ee34725a546f5db1 78 SMART SM00530 12 70 7.9E-6 T 18-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SHALO_1874 1d50e145ec619e7574e789288193ace5 145 Gene3D G3DSA:3.40.140.10 1 145 7.1E-45 T 18-10-2018 SHALO_1874 1d50e145ec619e7574e789288193ace5 145 SUPERFAMILY SSF53927 2 142 1.63E-39 T 18-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 SHALO_1874 1d50e145ec619e7574e789288193ace5 145 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 3 97 8.3E-22 T 18-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain SHALO_2979 f362c0f700704e430b6b6aeb10d793a2 342 Gene3D G3DSA:3.40.250.10 15 158 6.2E-19 T 18-10-2018 IPR036873 Rhodanese-like domain superfamily SHALO_2979 f362c0f700704e430b6b6aeb10d793a2 342 SMART SM00450 26 145 7.3E-7 T 18-10-2018 IPR001763 Rhodanese-like domain SHALO_2979 f362c0f700704e430b6b6aeb10d793a2 342 SMART SM00450 215 338 9.3E-16 T 18-10-2018 IPR001763 Rhodanese-like domain SHALO_2979 f362c0f700704e430b6b6aeb10d793a2 342 Gene3D G3DSA:3.40.250.10 211 341 3.2E-32 T 18-10-2018 IPR036873 Rhodanese-like domain superfamily SHALO_2979 f362c0f700704e430b6b6aeb10d793a2 342 SUPERFAMILY SSF52821 22 138 5.76E-16 T 18-10-2018 IPR036873 Rhodanese-like domain superfamily SHALO_2979 f362c0f700704e430b6b6aeb10d793a2 342 Pfam PF00581 Rhodanese-like domain 218 334 1.4E-15 T 18-10-2018 IPR001763 Rhodanese-like domain SHALO_2979 f362c0f700704e430b6b6aeb10d793a2 342 Pfam PF00581 Rhodanese-like domain 28 137 1.4E-11 T 18-10-2018 IPR001763 Rhodanese-like domain SHALO_2979 f362c0f700704e430b6b6aeb10d793a2 342 SUPERFAMILY SSF52821 215 340 1.7E-28 T 18-10-2018 IPR036873 Rhodanese-like domain superfamily SHALO_0314 8f49480ae32ba33bdbbd590d41c42d5f 222 SUPERFAMILY SSF46894 131 218 9.64E-14 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHALO_0314 8f49480ae32ba33bdbbd590d41c42d5f 222 SMART SM00862 147 218 2.8E-10 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_0314 8f49480ae32ba33bdbbd590d41c42d5f 222 SMART SM00448 1 112 3.1E-31 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_0314 8f49480ae32ba33bdbbd590d41c42d5f 222 SUPERFAMILY SSF52172 1 160 3.42E-32 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_0314 8f49480ae32ba33bdbbd590d41c42d5f 222 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 218 7.1E-12 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_0314 8f49480ae32ba33bdbbd590d41c42d5f 222 Gene3D G3DSA:1.10.10.10 124 220 3.0E-16 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_0314 8f49480ae32ba33bdbbd590d41c42d5f 222 Gene3D G3DSA:3.40.50.2300 1 123 3.6E-31 T 18-10-2018 SHALO_0314 8f49480ae32ba33bdbbd590d41c42d5f 222 Pfam PF00072 Response regulator receiver domain 3 112 1.4E-22 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_2714 cdb1b12ce205754bdd58a1e788f3442e 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 192 212 1.3E-39 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_2714 cdb1b12ce205754bdd58a1e788f3442e 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 1.3E-39 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_2714 cdb1b12ce205754bdd58a1e788f3442e 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 116 132 1.3E-39 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_2714 cdb1b12ce205754bdd58a1e788f3442e 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 69 80 1.3E-39 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_2714 cdb1b12ce205754bdd58a1e788f3442e 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 180 1.3E-39 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_2714 cdb1b12ce205754bdd58a1e788f3442e 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 142 161 1.3E-39 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_2714 cdb1b12ce205754bdd58a1e788f3442e 229 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 8 227 1.1E-53 T 18-10-2018 SHALO_2714 cdb1b12ce205754bdd58a1e788f3442e 229 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 129 157 - T 18-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SHALO_2714 cdb1b12ce205754bdd58a1e788f3442e 229 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 122 130 5.8E-12 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_2714 cdb1b12ce205754bdd58a1e788f3442e 229 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 161 5.8E-12 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_2714 cdb1b12ce205754bdd58a1e788f3442e 229 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 69 80 5.8E-12 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_2714 cdb1b12ce205754bdd58a1e788f3442e 229 SUPERFAMILY SSF51735 2 228 2.6E-71 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_2714 cdb1b12ce205754bdd58a1e788f3442e 229 Gene3D G3DSA:3.40.50.720 1 228 1.5E-71 T 18-10-2018 SHALO_2066 9514d36f023c1d26128d257296e52c5b 98 Pfam PF02049 Flagellar hook-basal body complex protein FliE 13 98 2.9E-25 T 18-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 SHALO_2066 9514d36f023c1d26128d257296e52c5b 98 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 13 98 1.9E-26 T 18-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 SHALO_2066 9514d36f023c1d26128d257296e52c5b 98 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 3 98 17.198 T 18-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 SHALO_2066 9514d36f023c1d26128d257296e52c5b 98 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 28 44 5.9E-13 T 18-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 SHALO_2066 9514d36f023c1d26128d257296e52c5b 98 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 83 96 5.9E-13 T 18-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 SHALO_2066 9514d36f023c1d26128d257296e52c5b 98 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 62 78 5.9E-13 T 18-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 SHALO_0937 ba5faadfcbacc95d91bee5116b9d2e31 213 Pfam PF01411 tRNA synthetases class II (A) 14 87 1.2E-8 T 18-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 SHALO_0937 ba5faadfcbacc95d91bee5116b9d2e31 213 SMART SM00863 166 208 3.0E-7 T 18-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 SHALO_0937 ba5faadfcbacc95d91bee5116b9d2e31 213 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 178 208 3.0E-6 T 18-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 SHALO_0937 ba5faadfcbacc95d91bee5116b9d2e31 213 Gene3D G3DSA:3.30.980.10 84 212 6.2E-29 T 18-10-2018 SHALO_0937 ba5faadfcbacc95d91bee5116b9d2e31 213 SUPERFAMILY SSF55186 84 210 6.15E-28 T 18-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 SHALO_0937 ba5faadfcbacc95d91bee5116b9d2e31 213 SUPERFAMILY SSF50447 3 83 5.65E-15 T 18-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily SHALO_0937 ba5faadfcbacc95d91bee5116b9d2e31 213 Gene3D G3DSA:2.40.30.130 1 83 4.6E-18 T 18-10-2018 SHALO_0275 05f29d29622f298c6d0f9c1c4029d111 275 SUPERFAMILY SSF48179 167 274 1.13E-33 T 18-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 SHALO_0275 05f29d29622f298c6d0f9c1c4029d111 275 Gene3D G3DSA:1.10.3660.10 167 274 2.6E-34 T 18-10-2018 SHALO_0275 05f29d29622f298c6d0f9c1c4029d111 275 SUPERFAMILY SSF51735 3 164 7.08E-35 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_0275 05f29d29622f298c6d0f9c1c4029d111 275 Gene3D G3DSA:3.40.50.720 2 164 1.5E-39 T 18-10-2018 SHALO_0275 05f29d29622f298c6d0f9c1c4029d111 275 Pfam PF02153 Prephenate dehydrogenase 15 266 3.3E-73 T 18-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 SHALO_2771 14c42f21703c0134b1a185176c1aa92f 148 Pfam PF02391 MoaE protein 18 114 4.6E-12 T 18-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 SHALO_2771 14c42f21703c0134b1a185176c1aa92f 148 Gene3D G3DSA:3.90.1170.40 1 145 8.9E-45 T 18-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 SHALO_2771 14c42f21703c0134b1a185176c1aa92f 148 SUPERFAMILY SSF54690 17 137 2.48E-29 T 18-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 SHALO_2976 5ea1c99b5771e6d1c5ce6e17c42b244a 394 Pfam PF09459 Ethylbenzene dehydrogenase 41 258 2.8E-18 T 18-10-2018 IPR019020 Cytochrome c-552/DMSO reductase-like, haem-binding domain GO:0020037 SHALO_2976 5ea1c99b5771e6d1c5ce6e17c42b244a 394 Gene3D G3DSA:1.10.760.10 284 394 5.8E-18 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_2976 5ea1c99b5771e6d1c5ce6e17c42b244a 394 SUPERFAMILY SSF46626 276 389 2.29E-14 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_2976 5ea1c99b5771e6d1c5ce6e17c42b244a 394 Pfam PF00034 Cytochrome c 286 389 1.4E-11 T 18-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_2976 5ea1c99b5771e6d1c5ce6e17c42b244a 394 SMART SM00887 40 260 7.1E-6 T 18-10-2018 IPR019020 Cytochrome c-552/DMSO reductase-like, haem-binding domain GO:0020037 SHALO_2262 8f24c96a50120e07a3a039a8d58f631f 227 Gene3D G3DSA:2.40.100.10 89 226 5.8E-54 T 18-10-2018 IPR029000 Cyclophilin-like domain superfamily SHALO_2262 8f24c96a50120e07a3a039a8d58f631f 227 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 9 212 1.1E-51 T 18-10-2018 IPR010016 KipI family KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 SHALO_2262 8f24c96a50120e07a3a039a8d58f631f 227 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 5 201 5.1E-66 T 18-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D SHALO_2262 8f24c96a50120e07a3a039a8d58f631f 227 SMART SM00796 3 204 2.3E-76 T 18-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D SHALO_2262 8f24c96a50120e07a3a039a8d58f631f 227 SUPERFAMILY SSF160467 4 95 9.15E-17 T 18-10-2018 SHALO_2262 8f24c96a50120e07a3a039a8d58f631f 227 SUPERFAMILY SSF50891 90 220 2.58E-43 T 18-10-2018 IPR029000 Cyclophilin-like domain superfamily SHALO_2262 8f24c96a50120e07a3a039a8d58f631f 227 Gene3D G3DSA:3.30.1360.40 6 82 6.2E-17 T 18-10-2018 SHALO_1201 d9c431c64747c6a20b37f25bfee33e2a 127 Gene3D G3DSA:3.30.420.130 1 118 1.5E-26 T 18-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily SHALO_1201 d9c431c64747c6a20b37f25bfee33e2a 127 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 12 101 7.2E-14 T 18-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis SHALO_1201 d9c431c64747c6a20b37f25bfee33e2a 127 SUPERFAMILY SSF53146 1 116 7.98E-24 T 18-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily SHALO_1533 7e358b72c472af1936b36b477ad2f31b 186 Gene3D G3DSA:1.10.357.10 10 186 8.5E-27 T 18-10-2018 SHALO_1533 7e358b72c472af1936b36b477ad2f31b 186 SUPERFAMILY SSF48498 90 185 2.49E-7 T 18-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily SHALO_1533 7e358b72c472af1936b36b477ad2f31b 186 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 58 2.1E-12 T 18-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SHALO_1533 7e358b72c472af1936b36b477ad2f31b 186 SUPERFAMILY SSF46689 4 74 1.28E-14 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SHALO_1533 7e358b72c472af1936b36b477ad2f31b 186 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 3.7E-7 T 18-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SHALO_1533 7e358b72c472af1936b36b477ad2f31b 186 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 3.7E-7 T 18-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SHALO_2101 1f15e5cbf0b6c9c8585cd664b3c0a4fa 149 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 5 136 2.5E-17 T 18-10-2018 IPR009936 Protein of unknown function DUF1468 SHALO_2811 52621a906446cb27fc0a13126aa22ca1 89 Gene3D G3DSA:1.20.58.1000 4 89 1.9E-23 T 18-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily SHALO_2811 52621a906446cb27fc0a13126aa22ca1 89 Pfam PF02583 Metal-sensitive transcriptional repressor 7 86 5.7E-23 T 18-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 SHALO_1685 743e56765f5fa32536635d74cff7b9c4 137 Gene3D G3DSA:1.10.10.10 1 135 1.5E-31 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_1685 743e56765f5fa32536635d74cff7b9c4 137 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 50 68 - T 18-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site SHALO_1685 743e56765f5fa32536635d74cff7b9c4 137 Pfam PF02082 Transcriptional regulator 4 83 1.3E-22 T 18-10-2018 IPR000944 Transcription regulator Rrf2-type SHALO_1685 743e56765f5fa32536635d74cff7b9c4 137 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 4 96 2.9E-26 T 18-10-2018 IPR000944 Transcription regulator Rrf2-type SHALO_1685 743e56765f5fa32536635d74cff7b9c4 137 SUPERFAMILY SSF46785 4 97 1.43E-22 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SHALO_0207 35eb872a32ae204ca7114da17fb3b6fc 222 PIRSF PIRSF015601 1 222 1.9E-41 T 18-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 SHALO_0207 35eb872a32ae204ca7114da17fb3b6fc 222 Gene3D G3DSA:3.40.1280.10 5 222 2.3E-31 T 18-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SHALO_0207 35eb872a32ae204ca7114da17fb3b6fc 222 SUPERFAMILY SSF75217 76 221 1.5E-29 T 18-10-2018 IPR029028 Alpha/beta knot methyltransferases SHALO_0207 35eb872a32ae204ca7114da17fb3b6fc 222 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 1 220 1.3E-45 T 18-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 SHALO_0207 35eb872a32ae204ca7114da17fb3b6fc 222 Pfam PF04452 RNA methyltransferase 16 220 3.4E-40 T 18-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 SHALO_1158 66724e361ab01a6bdf29da782c9aa9cc 405 SMART SM00387 294 405 1.9E-17 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_1158 66724e361ab01a6bdf29da782c9aa9cc 405 SUPERFAMILY SSF47384 169 252 8.04E-6 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SHALO_1158 66724e361ab01a6bdf29da782c9aa9cc 405 SUPERFAMILY SSF55874 254 402 3.93E-30 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_1158 66724e361ab01a6bdf29da782c9aa9cc 405 Gene3D G3DSA:1.10.287.130 160 253 8.9E-12 T 18-10-2018 SHALO_1158 66724e361ab01a6bdf29da782c9aa9cc 405 Gene3D G3DSA:3.30.565.10 254 404 1.9E-32 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_1158 66724e361ab01a6bdf29da782c9aa9cc 405 PRINTS PR00344 Bacterial sensor protein C-terminal signature 335 349 3.8E-14 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_1158 66724e361ab01a6bdf29da782c9aa9cc 405 PRINTS PR00344 Bacterial sensor protein C-terminal signature 366 384 3.8E-14 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_1158 66724e361ab01a6bdf29da782c9aa9cc 405 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 363 3.8E-14 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_1158 66724e361ab01a6bdf29da782c9aa9cc 405 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 403 3.8E-14 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_1158 66724e361ab01a6bdf29da782c9aa9cc 405 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 298 404 2.9E-18 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_1212 6736b25764a5aca989fbfbbc24da45ee 171 PIRSF PIRSF038996 1 171 1.8E-47 T 18-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 SHALO_1212 6736b25764a5aca989fbfbbc24da45ee 171 Gene3D G3DSA:3.40.50.360 3 171 2.1E-41 T 18-10-2018 IPR029039 Flavoprotein-like superfamily SHALO_1212 6736b25764a5aca989fbfbbc24da45ee 171 Pfam PF00258 Flavodoxin 6 163 7.6E-22 T 18-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 SHALO_1212 6736b25764a5aca989fbfbbc24da45ee 171 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 18-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 SHALO_1212 6736b25764a5aca989fbfbbc24da45ee 171 TIGRFAM TIGR01752 flav_long: flavodoxin 3 170 2.6E-44 T 18-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 SHALO_1212 6736b25764a5aca989fbfbbc24da45ee 171 SUPERFAMILY SSF52218 3 170 1.42E-37 T 18-10-2018 IPR029039 Flavoprotein-like superfamily SHALO_0922 bf4a0ae50b9eea2e92f1a5b36b93c189 373 SUPERFAMILY SSF56112 33 366 8.47E-53 T 18-10-2018 IPR011009 Protein kinase-like domain superfamily SHALO_0922 bf4a0ae50b9eea2e92f1a5b36b93c189 373 Pfam PF01636 Phosphotransferase enzyme family 115 260 2.0E-12 T 18-10-2018 IPR002575 Aminoglycoside phosphotransferase SHALO_0922 bf4a0ae50b9eea2e92f1a5b36b93c189 373 Gene3D G3DSA:3.30.200.20 10 120 2.8E-30 T 18-10-2018 SHALO_0922 bf4a0ae50b9eea2e92f1a5b36b93c189 373 Gene3D G3DSA:3.90.1200.10 126 369 2.0E-39 T 18-10-2018 SHALO_0289 01d1050cff43e1f545f89d249ce9c9fe 294 SUPERFAMILY SSF54211 2 120 2.88E-36 T 18-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold SHALO_0289 01d1050cff43e1f545f89d249ce9c9fe 294 Gene3D G3DSA:3.30.230.20 1 124 4.7E-38 T 18-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 SHALO_0289 01d1050cff43e1f545f89d249ce9c9fe 294 Gene3D G3DSA:3.30.1700.10 125 293 2.1E-60 T 18-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 SHALO_0289 01d1050cff43e1f545f89d249ce9c9fe 294 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 3 270 2.6E-99 T 18-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 SHALO_0289 01d1050cff43e1f545f89d249ce9c9fe 294 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 1 290 1.5E-109 T 18-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 SHALO_0289 01d1050cff43e1f545f89d249ce9c9fe 294 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 1 274 43.174 T 18-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 SHALO_0289 01d1050cff43e1f545f89d249ce9c9fe 294 SUPERFAMILY SSF54211 130 273 6.83E-48 T 18-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold SHALO_1811 bbb4b688e00ea6a9e3782e16ef378b4f 291 Pfam PF00149 Calcineurin-like phosphoesterase 19 224 3.0E-17 T 18-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 SHALO_1811 bbb4b688e00ea6a9e3782e16ef378b4f 291 Gene3D G3DSA:3.60.21.10 15 280 4.0E-27 T 18-10-2018 IPR029052 Metallo-dependent phosphatase-like SHALO_1811 bbb4b688e00ea6a9e3782e16ef378b4f 291 SUPERFAMILY SSF56300 19 224 2.58E-32 T 18-10-2018 SHALO_2191 4dcf2ff1cb0ec8b05e69220992af1fe7 202 Pfam PF01184 GPR1/FUN34/yaaH family 8 185 1.4E-21 T 18-10-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 SHALO_0101 b9c7b308bf15ca63a4a54398455518b2 204 SUPERFAMILY SSF56529 10 186 2.49E-43 T 18-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 SHALO_0101 b9c7b308bf15ca63a4a54398455518b2 204 Gene3D G3DSA:3.90.850.10 9 203 1.9E-45 T 18-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 SHALO_0101 b9c7b308bf15ca63a4a54398455518b2 204 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 15 178 7.6E-27 T 18-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 SHALO_0690 a7e45d833c4d2848d3239c4178ef7f3f 208 SUPERFAMILY SSF54534 3 141 6.09E-34 T 18-10-2018 SHALO_0690 a7e45d833c4d2848d3239c4178ef7f3f 208 Gene3D G3DSA:2.40.10.330 72 122 2.3E-48 T 18-10-2018 SHALO_0690 a7e45d833c4d2848d3239c4178ef7f3f 208 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 5 99 7.7E-13 T 18-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain SHALO_0690 a7e45d833c4d2848d3239c4178ef7f3f 208 Gene3D G3DSA:3.10.50.40 3 153 2.3E-48 T 18-10-2018 SHALO_0359 d97a00ee9a9fca02838b5d5aa2b05ed4 231 SMART SM00862 159 229 9.0E-9 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_0359 d97a00ee9a9fca02838b5d5aa2b05ed4 231 SUPERFAMILY SSF52172 14 180 9.96E-33 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_0359 d97a00ee9a9fca02838b5d5aa2b05ed4 231 Pfam PF00072 Response regulator receiver domain 17 124 5.2E-25 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_0359 d97a00ee9a9fca02838b5d5aa2b05ed4 231 Gene3D G3DSA:3.40.50.2300 12 137 1.1E-30 T 18-10-2018 SHALO_0359 d97a00ee9a9fca02838b5d5aa2b05ed4 231 SMART SM00448 14 125 6.3E-24 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_0359 d97a00ee9a9fca02838b5d5aa2b05ed4 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 162 228 3.8E-10 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_0359 d97a00ee9a9fca02838b5d5aa2b05ed4 231 SUPERFAMILY SSF46894 152 229 1.63E-9 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHALO_0359 d97a00ee9a9fca02838b5d5aa2b05ed4 231 Gene3D G3DSA:1.10.10.10 138 231 9.5E-14 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_0017 b9c552dcad5343ac61250d181198d40c 416 TIGRFAM TIGR01343 hacA_fam: homoaconitate hydratase family protein 4 412 2.7E-153 T 18-10-2018 IPR006251 Homoaconitase/3-isopropylmalate dehydratase, large subunit GO:0008652|GO:0016836|GO:0051539 KEGG: 00290+4.2.1.33 SHALO_0017 b9c552dcad5343ac61250d181198d40c 416 TIGRFAM TIGR02086 IPMI_arch: 3-isopropylmalate dehydratase, large subunit 3 412 1.9E-151 T 18-10-2018 IPR011826 Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 SHALO_0017 b9c552dcad5343ac61250d181198d40c 416 Pfam PF00330 Aconitase family (aconitate hydratase) 34 407 2.9E-90 T 18-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 SHALO_0017 b9c552dcad5343ac61250d181198d40c 416 Hamap MF_01027 3-isopropylmalate dehydratase large subunit [leuC]. 1 415 43.691 T 18-10-2018 IPR011826 Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 SHALO_0017 b9c552dcad5343ac61250d181198d40c 416 PRINTS PR00415 Aconitase family signature 124 139 1.3E-17 T 18-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 SHALO_0017 b9c552dcad5343ac61250d181198d40c 416 PRINTS PR00415 Aconitase family signature 348 361 1.3E-17 T 18-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 SHALO_0017 b9c552dcad5343ac61250d181198d40c 416 PRINTS PR00415 Aconitase family signature 200 213 1.3E-17 T 18-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 SHALO_0017 b9c552dcad5343ac61250d181198d40c 416 PRINTS PR00415 Aconitase family signature 110 123 1.3E-17 T 18-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 SHALO_0017 b9c552dcad5343ac61250d181198d40c 416 Gene3D G3DSA:3.30.499.20 3 266 2.4E-93 T 18-10-2018 SHALO_0017 b9c552dcad5343ac61250d181198d40c 416 Gene3D G3DSA:3.30.499.10 269 416 1.8E-51 T 18-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 SHALO_0017 b9c552dcad5343ac61250d181198d40c 416 SUPERFAMILY SSF53732 5 415 5.89E-129 T 18-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 SHALO_0814 d7d136a104c2857acdd86ee978306cb3 977 Gene3D G3DSA:1.10.1420.10 310 616 2.4E-31 T 18-10-2018 SHALO_0814 d7d136a104c2857acdd86ee978306cb3 977 Gene3D G3DSA:1.10.1420.10 420 559 2.4E-31 T 18-10-2018 SHALO_0814 d7d136a104c2857acdd86ee978306cb3 977 SUPERFAMILY SSF53150 140 319 9.68E-9 T 18-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 SHALO_0814 d7d136a104c2857acdd86ee978306cb3 977 Pfam PF00488 MutS domain V 691 879 6.6E-41 T 18-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 SHALO_0814 d7d136a104c2857acdd86ee978306cb3 977 Gene3D G3DSA:3.40.1170.10 21 140 6.3E-15 T 18-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 SHALO_0814 d7d136a104c2857acdd86ee978306cb3 977 SUPERFAMILY SSF55271 30 135 4.32E-14 T 18-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 SHALO_0814 d7d136a104c2857acdd86ee978306cb3 977 Gene3D G3DSA:3.40.50.300 625 952 1.9E-61 T 18-10-2018 SHALO_0814 d7d136a104c2857acdd86ee978306cb3 977 SUPERFAMILY SSF52540 630 878 5.57E-29 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0814 d7d136a104c2857acdd86ee978306cb3 977 Pfam PF01624 MutS domain I 30 137 4.7E-11 T 18-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 SHALO_0814 d7d136a104c2857acdd86ee978306cb3 977 SUPERFAMILY SSF48334 311 623 4.71E-34 T 18-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily SHALO_0814 d7d136a104c2857acdd86ee978306cb3 977 PIRSF PIRSF037677 30 926 3.1E-75 T 18-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 SHALO_0814 d7d136a104c2857acdd86ee978306cb3 977 Pfam PF05192 MutS domain III 310 616 2.6E-28 T 18-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 SHALO_0814 d7d136a104c2857acdd86ee978306cb3 977 SMART SM00533 322 652 7.4E-34 T 18-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 SHALO_0814 d7d136a104c2857acdd86ee978306cb3 977 SMART SM00534 687 877 9.1E-51 T 18-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 SHALO_2948 4a12eb9ba10e0a1f00a88e1f3827199a 356 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 353 9.9E-109 T 18-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 SHALO_2948 4a12eb9ba10e0a1f00a88e1f3827199a 356 PIRSF PIRSF006205 1 356 5.0E-110 T 18-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 SHALO_2948 4a12eb9ba10e0a1f00a88e1f3827199a 356 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 127 207 3.2E-31 T 18-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 SHALO_2948 4a12eb9ba10e0a1f00a88e1f3827199a 356 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 119 1.5E-32 T 18-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 SHALO_2948 4a12eb9ba10e0a1f00a88e1f3827199a 356 Gene3D G3DSA:1.10.1740.10 278 356 5.2E-9 T 18-10-2018 SHALO_2948 4a12eb9ba10e0a1f00a88e1f3827199a 356 SUPERFAMILY SSF51735 1 123 6.82E-26 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_2948 4a12eb9ba10e0a1f00a88e1f3827199a 356 Pfam PF13288 DXP reductoisomerase C-terminal domain 237 351 3.1E-21 T 18-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 SHALO_2948 4a12eb9ba10e0a1f00a88e1f3827199a 356 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 1 356 38.541 T 18-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 SHALO_2948 4a12eb9ba10e0a1f00a88e1f3827199a 356 SUPERFAMILY SSF69055 267 355 2.22E-15 T 18-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 SHALO_2948 4a12eb9ba10e0a1f00a88e1f3827199a 356 Gene3D G3DSA:3.40.50.720 1 131 1.1E-36 T 18-10-2018 SHALO_2948 4a12eb9ba10e0a1f00a88e1f3827199a 356 SUPERFAMILY SSF55347 113 238 4.58E-43 T 18-10-2018 SHALO_1649 bfe8efc7a3a274b506963437ef1cffe2 553 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 191 320 4.8E-44 T 18-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 SHALO_1649 bfe8efc7a3a274b506963437ef1cffe2 553 SMART SM00382 187 323 1.3E-23 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_1649 bfe8efc7a3a274b506963437ef1cffe2 553 Pfam PF01434 Peptidase family M41 386 500 9.6E-15 T 18-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 SHALO_1649 bfe8efc7a3a274b506963437ef1cffe2 553 Gene3D G3DSA:1.10.8.60 323 394 1.3E-17 T 18-10-2018 SHALO_1649 bfe8efc7a3a274b506963437ef1cffe2 553 ProSitePatterns PS00674 AAA-protein family signature. 291 309 - T 18-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 SHALO_1649 bfe8efc7a3a274b506963437ef1cffe2 553 SUPERFAMILY SSF140990 400 551 2.75E-29 T 18-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 SHALO_1649 bfe8efc7a3a274b506963437ef1cffe2 553 Gene3D G3DSA:1.20.58.760 395 552 6.4E-21 T 18-10-2018 SHALO_1649 bfe8efc7a3a274b506963437ef1cffe2 553 SUPERFAMILY SSF52540 150 388 7.22E-65 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_1649 bfe8efc7a3a274b506963437ef1cffe2 553 Gene3D G3DSA:3.40.50.300 140 322 1.7E-65 T 18-10-2018 SHALO_1989 a44737af7add82397113c43bb1330afb 396 Gene3D G3DSA:3.60.70.12 9 266 1.7E-74 T 18-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 SHALO_1989 a44737af7add82397113c43bb1330afb 396 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 12 396 9.9E-108 T 18-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 SHALO_1989 a44737af7add82397113c43bb1330afb 396 Pfam PF01960 ArgJ family 20 396 1.7E-120 T 18-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 SHALO_1989 a44737af7add82397113c43bb1330afb 396 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 25 396 6.0E-116 T 18-10-2018 SHALO_1989 a44737af7add82397113c43bb1330afb 396 SUPERFAMILY SSF56266 14 393 5.89E-112 T 18-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 SHALO_1989 a44737af7add82397113c43bb1330afb 396 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 396 108.717 T 18-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 SHALO_1989 a44737af7add82397113c43bb1330afb 396 Gene3D G3DSA:3.10.20.340 267 396 9.5E-41 T 18-10-2018 SHALO_0692 66d1ab91eced49d55805609e89805a81 307 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 5 288 2.4E-95 T 18-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 SHALO_0692 66d1ab91eced49d55805609e89805a81 307 PIRSF PIRSF000446 1 307 4.6E-79 T 18-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 SHALO_0692 66d1ab91eced49d55805609e89805a81 307 SUPERFAMILY SSF52151 5 294 1.94E-53 T 18-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase SHALO_0692 66d1ab91eced49d55805609e89805a81 307 Pfam PF00698 Acyl transferase domain 5 273 2.5E-34 T 18-10-2018 IPR014043 Acyl transferase SHALO_0692 66d1ab91eced49d55805609e89805a81 307 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 299 2.9E-16 T 18-10-2018 IPR020801 Polyketide synthase, acyl transferase domain SHALO_0692 66d1ab91eced49d55805609e89805a81 307 SUPERFAMILY SSF55048 129 193 6.67E-13 T 18-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding SHALO_0692 66d1ab91eced49d55805609e89805a81 307 Gene3D G3DSA:3.30.70.250 124 197 1.8E-82 T 18-10-2018 SHALO_0692 66d1ab91eced49d55805609e89805a81 307 Gene3D G3DSA:3.40.366.10 6 282 1.8E-82 T 18-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 SHALO_0346 8846faa6a80c27c305862bea20a05f80 221 SUPERFAMILY SSF52540 1 221 3.28E-60 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0346 8846faa6a80c27c305862bea20a05f80 221 SMART SM00382 30 219 6.7E-17 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_0346 8846faa6a80c27c305862bea20a05f80 221 Gene3D G3DSA:3.40.50.300 1 221 2.1E-61 T 18-10-2018 SHALO_0346 8846faa6a80c27c305862bea20a05f80 221 Pfam PF00005 ABC transporter 21 170 1.7E-35 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_0346 8846faa6a80c27c305862bea20a05f80 221 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_1292 370d4b97e579ac0b602e0eaaa81ea48d 115 TIGRFAM TIGR00100 hypA: hydrogenase nickel insertion protein HypA 1 113 1.8E-26 T 18-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 SHALO_1292 370d4b97e579ac0b602e0eaaa81ea48d 115 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 1 112 4.6E-29 T 18-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 SHALO_1292 370d4b97e579ac0b602e0eaaa81ea48d 115 Gene3D G3DSA:3.30.2320.80 1 115 4.3E-32 T 18-10-2018 SHALO_1292 370d4b97e579ac0b602e0eaaa81ea48d 115 PIRSF PIRSF004761 1 115 1.1E-31 T 18-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 SHALO_1292 370d4b97e579ac0b602e0eaaa81ea48d 115 Hamap MF_00213 Hydrogenase maturation factor HypA [hypA]. 1 113 19.582 T 18-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 SHALO_1292 370d4b97e579ac0b602e0eaaa81ea48d 115 ProSitePatterns PS01249 Hydrogenases expression/synthesis hypA family signature. 34 76 - T 18-10-2018 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site SHALO_1191 9d22dd5495dab60df9e4d0834332b483 331 SUPERFAMILY SSF52058 15 320 6.12E-62 T 18-10-2018 SHALO_1191 9d22dd5495dab60df9e4d0834332b483 331 PRINTS PR00019 Leucine-rich repeat signature 257 270 1.3E-5 T 18-10-2018 SHALO_1191 9d22dd5495dab60df9e4d0834332b483 331 PRINTS PR00019 Leucine-rich repeat signature 169 182 1.3E-5 T 18-10-2018 SHALO_1191 9d22dd5495dab60df9e4d0834332b483 331 SMART SM00369 120 142 8.4 T 18-10-2018 IPR003591 Leucine-rich repeat, typical subtype SHALO_1191 9d22dd5495dab60df9e4d0834332b483 331 SMART SM00369 280 302 9.6 T 18-10-2018 IPR003591 Leucine-rich repeat, typical subtype SHALO_1191 9d22dd5495dab60df9e4d0834332b483 331 SMART SM00369 189 211 69.0 T 18-10-2018 IPR003591 Leucine-rich repeat, typical subtype SHALO_1191 9d22dd5495dab60df9e4d0834332b483 331 SMART SM00369 257 279 0.14 T 18-10-2018 IPR003591 Leucine-rich repeat, typical subtype SHALO_1191 9d22dd5495dab60df9e4d0834332b483 331 SMART SM00369 234 255 31.0 T 18-10-2018 IPR003591 Leucine-rich repeat, typical subtype SHALO_1191 9d22dd5495dab60df9e4d0834332b483 331 SMART SM00369 143 165 46.0 T 18-10-2018 IPR003591 Leucine-rich repeat, typical subtype SHALO_1191 9d22dd5495dab60df9e4d0834332b483 331 SMART SM00369 166 187 6.8 T 18-10-2018 IPR003591 Leucine-rich repeat, typical subtype SHALO_1191 9d22dd5495dab60df9e4d0834332b483 331 SMART SM00369 74 96 40.0 T 18-10-2018 IPR003591 Leucine-rich repeat, typical subtype SHALO_1191 9d22dd5495dab60df9e4d0834332b483 331 SMART SM00369 51 73 12.0 T 18-10-2018 IPR003591 Leucine-rich repeat, typical subtype SHALO_1191 9d22dd5495dab60df9e4d0834332b483 331 SMART SM00369 97 119 0.24 T 18-10-2018 IPR003591 Leucine-rich repeat, typical subtype SHALO_1191 9d22dd5495dab60df9e4d0834332b483 331 SMART SM00369 28 50 42.0 T 18-10-2018 IPR003591 Leucine-rich repeat, typical subtype SHALO_1191 9d22dd5495dab60df9e4d0834332b483 331 Pfam PF13855 Leucine rich repeat 214 270 7.6E-9 T 18-10-2018 IPR001611 Leucine-rich repeat GO:0005515 SHALO_1191 9d22dd5495dab60df9e4d0834332b483 331 Pfam PF13855 Leucine rich repeat 76 133 1.9E-7 T 18-10-2018 IPR001611 Leucine-rich repeat GO:0005515 SHALO_1191 9d22dd5495dab60df9e4d0834332b483 331 SMART SM00364 74 93 47.0 T 18-10-2018 SHALO_1191 9d22dd5495dab60df9e4d0834332b483 331 SMART SM00364 189 208 28.0 T 18-10-2018 SHALO_1191 9d22dd5495dab60df9e4d0834332b483 331 SMART SM00364 166 185 1.2 T 18-10-2018 SHALO_1191 9d22dd5495dab60df9e4d0834332b483 331 SMART SM00364 28 47 180.0 T 18-10-2018 SHALO_1191 9d22dd5495dab60df9e4d0834332b483 331 SMART SM00364 257 276 6.1 T 18-10-2018 SHALO_1191 9d22dd5495dab60df9e4d0834332b483 331 SMART SM00364 97 116 65.0 T 18-10-2018 SHALO_1191 9d22dd5495dab60df9e4d0834332b483 331 SMART SM00364 234 253 260.0 T 18-10-2018 SHALO_1191 9d22dd5495dab60df9e4d0834332b483 331 SMART SM00364 280 299 16.0 T 18-10-2018 SHALO_1191 9d22dd5495dab60df9e4d0834332b483 331 SMART SM00364 51 70 5.4 T 18-10-2018 SHALO_1191 9d22dd5495dab60df9e4d0834332b483 331 Gene3D G3DSA:3.80.10.10 207 322 3.5E-26 T 18-10-2018 IPR032675 Leucine-rich repeat domain superfamily SHALO_1191 9d22dd5495dab60df9e4d0834332b483 331 Gene3D G3DSA:3.80.10.10 108 206 1.8E-23 T 18-10-2018 IPR032675 Leucine-rich repeat domain superfamily SHALO_1191 9d22dd5495dab60df9e4d0834332b483 331 Gene3D G3DSA:3.80.10.10 9 107 1.3E-25 T 18-10-2018 IPR032675 Leucine-rich repeat domain superfamily SHALO_0672 30573c97803be95a63b1d9565980db8a 254 Gene3D G3DSA:3.40.1160.10 1 251 1.9E-71 T 18-10-2018 IPR036393 Acetylglutamate kinase-like superfamily SHALO_0672 30573c97803be95a63b1d9565980db8a 254 Hamap MF_00456 Glutamate 5-kinase [proB]. 2 254 30.889 T 18-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 SHALO_0672 30573c97803be95a63b1d9565980db8a 254 PIRSF PIRSF000729 1 254 5.6E-75 T 18-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 SHALO_0672 30573c97803be95a63b1d9565980db8a 254 SUPERFAMILY SSF53633 2 251 3.27E-57 T 18-10-2018 IPR036393 Acetylglutamate kinase-like superfamily SHALO_0672 30573c97803be95a63b1d9565980db8a 254 Pfam PF00696 Amino acid kinase family 3 227 1.7E-40 T 18-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 SHALO_0672 30573c97803be95a63b1d9565980db8a 254 PRINTS PR00474 Glutamate 5-kinase family signature 37 51 5.3E-43 T 18-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 SHALO_0672 30573c97803be95a63b1d9565980db8a 254 PRINTS PR00474 Glutamate 5-kinase family signature 109 130 5.3E-43 T 18-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 SHALO_0672 30573c97803be95a63b1d9565980db8a 254 PRINTS PR00474 Glutamate 5-kinase family signature 202 222 5.3E-43 T 18-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 SHALO_0672 30573c97803be95a63b1d9565980db8a 254 PRINTS PR00474 Glutamate 5-kinase family signature 69 97 5.3E-43 T 18-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 SHALO_0672 30573c97803be95a63b1d9565980db8a 254 PRINTS PR00474 Glutamate 5-kinase family signature 141 168 5.3E-43 T 18-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 SHALO_0672 30573c97803be95a63b1d9565980db8a 254 TIGRFAM TIGR01027 proB: glutamate 5-kinase 2 250 5.4E-71 T 18-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 SHALO_0408 7b3c4666f586adf955a4fc0f1e080029 401 SUPERFAMILY SSF56349 102 389 3.53E-48 T 18-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SHALO_0408 7b3c4666f586adf955a4fc0f1e080029 401 Gene3D G3DSA:3.30.160.390 5 105 3.3E-29 T 18-10-2018 IPR038488 Integrase, DNA-binding domain superfamily SHALO_0408 7b3c4666f586adf955a4fc0f1e080029 401 Gene3D G3DSA:1.10.443.10 212 390 1.0E-17 T 18-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 SHALO_0408 7b3c4666f586adf955a4fc0f1e080029 401 Pfam PF13356 Arm DNA-binding domain 6 90 1.1E-14 T 18-10-2018 IPR025166 Integrase, DNA-binding domain SHALO_0408 7b3c4666f586adf955a4fc0f1e080029 401 Gene3D G3DSA:1.10.150.130 106 182 3.8E-16 T 18-10-2018 IPR010998 Integrase/recombinase, N-terminal SHALO_0408 7b3c4666f586adf955a4fc0f1e080029 401 Pfam PF00589 Phage integrase family 215 379 1.8E-19 T 18-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SHALO_2899 4a279b1ea3b7cb2c28c1bb7bf8051a18 155 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 154 2.5E-49 T 18-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 SHALO_2899 4a279b1ea3b7cb2c28c1bb7bf8051a18 155 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 82 95 1.4E-17 T 18-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 SHALO_2899 4a279b1ea3b7cb2c28c1bb7bf8051a18 155 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 114 127 1.4E-17 T 18-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 SHALO_2899 4a279b1ea3b7cb2c28c1bb7bf8051a18 155 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 99 113 1.4E-17 T 18-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 SHALO_2899 4a279b1ea3b7cb2c28c1bb7bf8051a18 155 SUPERFAMILY SSF51230 79 152 1.44E-21 T 18-10-2018 IPR011053 Single hybrid motif SHALO_2899 4a279b1ea3b7cb2c28c1bb7bf8051a18 155 Gene3D G3DSA:2.40.50.100 76 153 4.8E-28 T 18-10-2018 SHALO_2899 4a279b1ea3b7cb2c28c1bb7bf8051a18 155 Pfam PF00364 Biotin-requiring enzyme 80 151 1.2E-19 T 18-10-2018 IPR000089 Biotin/lipoyl attachment SHALO_0850 36b6945536963da9d2e7d0957a509a7e 71 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 4 66 13.615 T 18-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_0850 36b6945536963da9d2e7d0957a509a7e 71 Pfam PF01192 RNA polymerase Rpb6 18 64 2.4E-12 T 18-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 SHALO_0850 36b6945536963da9d2e7d0957a509a7e 71 SUPERFAMILY SSF63562 15 68 2.35E-15 T 18-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 SHALO_0850 36b6945536963da9d2e7d0957a509a7e 71 SMART SM01409 10 65 1.9E-11 T 18-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 SHALO_0850 36b6945536963da9d2e7d0957a509a7e 71 Gene3D G3DSA:3.90.940.10 5 70 3.9E-15 T 18-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 SHALO_0850 36b6945536963da9d2e7d0957a509a7e 71 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 17 63 1.5E-9 T 18-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_2038 eaa9e00e12d0ae3d3501c1eb535d43d4 239 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 221 3.1E-45 T 18-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 SHALO_2038 eaa9e00e12d0ae3d3501c1eb535d43d4 239 Gene3D G3DSA:3.40.1390.30 98 204 7.4E-54 T 18-10-2018 SHALO_2038 eaa9e00e12d0ae3d3501c1eb535d43d4 239 Gene3D G3DSA:3.40.1390.30 6 214 7.4E-54 T 18-10-2018 SHALO_2038 eaa9e00e12d0ae3d3501c1eb535d43d4 239 SUPERFAMILY SSF102705 1 237 5.62E-63 T 18-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily SHALO_2038 eaa9e00e12d0ae3d3501c1eb535d43d4 239 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 6 223 3.5E-58 T 18-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 SHALO_2427 0b04ac66e436f6b01df85dd3f4e89908 83 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 4 79 22.434 T 18-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_2427 0b04ac66e436f6b01df85dd3f4e89908 83 Pfam PF00366 Ribosomal protein S17 9 74 1.4E-29 T 18-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_2427 0b04ac66e436f6b01df85dd3f4e89908 83 ProSitePatterns PS00056 Ribosomal protein S17 signature. 55 67 - T 18-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_2427 0b04ac66e436f6b01df85dd3f4e89908 83 PRINTS PR00973 Ribosomal protein S17 family signature 55 65 1.2E-11 T 18-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_2427 0b04ac66e436f6b01df85dd3f4e89908 83 PRINTS PR00973 Ribosomal protein S17 family signature 65 72 1.2E-11 T 18-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_2427 0b04ac66e436f6b01df85dd3f4e89908 83 PRINTS PR00973 Ribosomal protein S17 family signature 23 46 1.2E-11 T 18-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_2427 0b04ac66e436f6b01df85dd3f4e89908 83 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 4 70 7.0E-18 T 18-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_2427 0b04ac66e436f6b01df85dd3f4e89908 83 Gene3D G3DSA:2.40.50.140 3 83 6.5E-30 T 18-10-2018 SHALO_2427 0b04ac66e436f6b01df85dd3f4e89908 83 SUPERFAMILY SSF50249 4 79 4.71E-28 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold SHALO_2427 0b04ac66e436f6b01df85dd3f4e89908 83 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 4 74 8.6E-33 T 18-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_1525 755c3321f7cf82cca1b4260a472129d1 330 Gene3D G3DSA:3.40.50.11220 1 124 7.5E-31 T 18-10-2018 SHALO_1525 755c3321f7cf82cca1b4260a472129d1 330 Pfam PF01890 Cobalamin synthesis G C-terminus 203 321 1.5E-23 T 18-10-2018 IPR002750 CobE/GbiG C-terminal domain GO:0009236 SHALO_1525 755c3321f7cf82cca1b4260a472129d1 330 Pfam PF11761 Cobalamin biosynthesis central region 134 190 6.8E-6 T 18-10-2018 IPR021745 Cobalamin biosynthesis central region KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 SHALO_1525 755c3321f7cf82cca1b4260a472129d1 330 Pfam PF11760 Cobalamin synthesis G N-terminal 50 129 1.4E-31 T 18-10-2018 IPR021744 Cobalamin synthesis G, N-terminal KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 SHALO_1525 755c3321f7cf82cca1b4260a472129d1 330 SUPERFAMILY SSF159664 197 324 2.22E-28 T 18-10-2018 IPR036518 CobE/GbiG C-terminal domain superfamily GO:0009236 SHALO_1525 755c3321f7cf82cca1b4260a472129d1 330 Gene3D G3DSA:3.30.420.180 193 326 1.9E-25 T 18-10-2018 IPR036518 CobE/GbiG C-terminal domain superfamily GO:0009236 SHALO_1525 755c3321f7cf82cca1b4260a472129d1 330 SUPERFAMILY SSF159672 3 210 3.66E-51 T 18-10-2018 IPR038029 GbiG N-terminal domain superfamily KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 SHALO_2045 69d36df8b9bbea4a156fb9fdc8440657 476 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 9 474 2.6E-191 T 18-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SHALO_2045 69d36df8b9bbea4a156fb9fdc8440657 476 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 264 279 - T 18-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 SHALO_2045 69d36df8b9bbea4a156fb9fdc8440657 476 SUPERFAMILY SSF54368 8 106 9.55E-34 T 18-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SHALO_2045 69d36df8b9bbea4a156fb9fdc8440657 476 SMART SM01230 107 385 2.3E-141 T 18-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SHALO_2045 69d36df8b9bbea4a156fb9fdc8440657 476 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 19 99 6.6E-31 T 18-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 SHALO_2045 69d36df8b9bbea4a156fb9fdc8440657 476 SUPERFAMILY SSF55931 108 475 1.67E-121 T 18-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 SHALO_2045 69d36df8b9bbea4a156fb9fdc8440657 476 ProSitePatterns PS00180 Glutamine synthetase signature 1. 55 73 - T 18-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 SHALO_2045 69d36df8b9bbea4a156fb9fdc8440657 476 Gene3D G3DSA:3.30.590.10 110 458 2.5E-126 T 18-10-2018 SHALO_2045 69d36df8b9bbea4a156fb9fdc8440657 476 Pfam PF00120 Glutamine synthetase, catalytic domain 108 471 1.3E-124 T 18-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SHALO_2045 69d36df8b9bbea4a156fb9fdc8440657 476 Gene3D G3DSA:3.10.20.70 7 109 6.8E-34 T 18-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SHALO_3022 d545ccb6b42832c94da6f655e9f9ad16 157 SUPERFAMILY SSF53098 2 154 7.33E-42 T 18-10-2018 IPR012337 Ribonuclease H-like superfamily SHALO_3022 d545ccb6b42832c94da6f655e9f9ad16 157 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 106 125 2.2E-21 T 18-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SHALO_3022 d545ccb6b42832c94da6f655e9f9ad16 157 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 4 17 2.2E-21 T 18-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SHALO_3022 d545ccb6b42832c94da6f655e9f9ad16 157 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 2.2E-21 T 18-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SHALO_3022 d545ccb6b42832c94da6f655e9f9ad16 157 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 60 76 2.2E-21 T 18-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SHALO_3022 d545ccb6b42832c94da6f655e9f9ad16 157 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 112 147 - T 18-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 SHALO_3022 d545ccb6b42832c94da6f655e9f9ad16 157 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 3 150 7.1E-57 T 18-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SHALO_3022 d545ccb6b42832c94da6f655e9f9ad16 157 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 3 155 4.3E-62 T 18-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SHALO_3022 d545ccb6b42832c94da6f655e9f9ad16 157 Gene3D G3DSA:3.30.420.10 1 156 1.8E-44 T 18-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 SHALO_3022 d545ccb6b42832c94da6f655e9f9ad16 157 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 1 153 40.226 T 18-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SHALO_0116 f506e2f88917f3a53562e29293ad68eb 239 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 106 234 7.9E-18 T 18-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 SHALO_0116 f506e2f88917f3a53562e29293ad68eb 239 Gene3D G3DSA:1.10.530.10 100 238 7.6E-19 T 18-10-2018 SHALO_0116 f506e2f88917f3a53562e29293ad68eb 239 SMART SM00047 90 222 5.6E-4 T 18-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 SHALO_0158 9415219f77ef808d39af9e1755d5cf26 219 Pfam PF05732 Firmicute plasmid replication protein (RepL) 146 208 3.7E-5 T 18-10-2018 IPR008813 Plasmid replication protein, RepL GO:0006260|GO:0006276 SHALO_0158 9415219f77ef808d39af9e1755d5cf26 219 SUPERFAMILY SSF46785 150 206 3.75E-5 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SHALO_0158 9415219f77ef808d39af9e1755d5cf26 219 Pfam PF00072 Response regulator receiver domain 11 121 5.7E-25 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_0158 9415219f77ef808d39af9e1755d5cf26 219 Gene3D G3DSA:3.40.50.2300 5 133 2.9E-30 T 18-10-2018 SHALO_0158 9415219f77ef808d39af9e1755d5cf26 219 SUPERFAMILY SSF52172 10 125 1.2E-32 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_0158 9415219f77ef808d39af9e1755d5cf26 219 SMART SM00448 9 121 1.0E-25 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_0180 54a1d1efb4769b20b24ec7cfe6798fe7 523 Pfam PF00501 AMP-binding enzyme 15 419 5.5E-103 T 18-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 SHALO_0180 54a1d1efb4769b20b24ec7cfe6798fe7 523 SUPERFAMILY SSF56801 5 515 8.9E-143 T 18-10-2018 SHALO_0180 54a1d1efb4769b20b24ec7cfe6798fe7 523 PRINTS PR00154 AMP-binding signature 167 178 8.7E-5 T 18-10-2018 IPR020459 AMP-binding SHALO_0180 54a1d1efb4769b20b24ec7cfe6798fe7 523 PRINTS PR00154 AMP-binding signature 179 187 8.7E-5 T 18-10-2018 IPR020459 AMP-binding SHALO_0180 54a1d1efb4769b20b24ec7cfe6798fe7 523 ProSitePatterns PS00455 Putative AMP-binding domain signature. 172 183 - T 18-10-2018 IPR020845 AMP-binding, conserved site SHALO_0180 54a1d1efb4769b20b24ec7cfe6798fe7 523 Gene3D G3DSA:3.30.300.30 414 518 3.9E-28 T 18-10-2018 SHALO_0180 54a1d1efb4769b20b24ec7cfe6798fe7 523 Pfam PF13193 AMP-binding enzyme C-terminal domain 428 504 2.8E-15 T 18-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain SHALO_0180 54a1d1efb4769b20b24ec7cfe6798fe7 523 Gene3D G3DSA:3.40.50.12780 4 412 1.2E-112 T 18-10-2018 SHALO_2682 c08a340122da9505b7411f4c8ee14087 299 Gene3D G3DSA:1.20.950.20 87 298 2.3E-50 T 18-10-2018 SHALO_2682 c08a340122da9505b7411f4c8ee14087 299 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 92 295 3.4E-60 T 18-10-2018 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 SHALO_2682 c08a340122da9505b7411f4c8ee14087 299 SUPERFAMILY SSF81342 87 298 4.47E-37 T 18-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 SHALO_2682 c08a340122da9505b7411f4c8ee14087 299 Pfam PF01292 Prokaryotic cytochrome b561 94 275 8.8E-16 T 18-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 SHALO_2245 73c47add4688877ea13819b5ef0aa9fb 337 Gene3D G3DSA:3.40.50.11660 94 281 6.2E-24 T 18-10-2018 IPR038577 GT10-like superfamily SHALO_2245 73c47add4688877ea13819b5ef0aa9fb 337 Pfam PF00852 Glycosyltransferase family 10 (fucosyltransferase) C-term 138 273 1.5E-10 T 18-10-2018 IPR001503 Glycosyl transferase family 10 GO:0006486|GO:0008417|GO:0016020 SHALO_2245 73c47add4688877ea13819b5ef0aa9fb 337 SUPERFAMILY SSF53756 25 286 7.53E-45 T 18-10-2018 SHALO_2590 f9296033b2d9f8d888cab13980280964 91 Gene3D G3DSA:3.30.2310.20 1 91 3.2E-11 T 18-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily SHALO_2590 f9296033b2d9f8d888cab13980280964 91 SUPERFAMILY SSF143011 1 91 1.83E-19 T 18-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily SHALO_2590 f9296033b2d9f8d888cab13980280964 91 Pfam PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ 3 90 3.9E-8 T 18-10-2018 IPR004386 Toxin-antitoxin system, YafQ-like toxin SHALO_2590 f9296033b2d9f8d888cab13980280964 91 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 4 91 4.6E-7 T 18-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family SHALO_0983 b259791c2ffe84a11dac49683c1b82ff 283 PIRSF PIRSF000103 1 283 1.7E-72 T 18-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 SHALO_0983 b259791c2ffe84a11dac49683c1b82ff 283 SUPERFAMILY SSF51735 1 159 6.54E-36 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_0983 b259791c2ffe84a11dac49683c1b82ff 283 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 162 280 1.7E-22 T 18-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 SHALO_0983 b259791c2ffe84a11dac49683c1b82ff 283 SUPERFAMILY SSF48179 159 282 7.14E-27 T 18-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 SHALO_0983 b259791c2ffe84a11dac49683c1b82ff 283 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 156 1.4E-32 T 18-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 SHALO_0983 b259791c2ffe84a11dac49683c1b82ff 283 Gene3D G3DSA:1.10.1040.10 161 283 4.0E-29 T 18-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SHALO_0983 b259791c2ffe84a11dac49683c1b82ff 283 Gene3D G3DSA:3.40.50.720 1 157 7.8E-40 T 18-10-2018 SHALO_0894 bca7aefcd5538555e5a9319eb4e92c31 233 Gene3D G3DSA:1.10.10.10 130 223 5.8E-15 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_0894 bca7aefcd5538555e5a9319eb4e92c31 233 SMART SM00448 2 114 1.6E-29 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_0894 bca7aefcd5538555e5a9319eb4e92c31 233 SMART SM00862 149 219 2.8E-7 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_0894 bca7aefcd5538555e5a9319eb4e92c31 233 Pfam PF00072 Response regulator receiver domain 4 114 5.0E-23 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_0894 bca7aefcd5538555e5a9319eb4e92c31 233 SUPERFAMILY SSF52172 1 169 2.7E-31 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_0894 bca7aefcd5538555e5a9319eb4e92c31 233 SUPERFAMILY SSF46894 148 219 9.18E-10 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHALO_0894 bca7aefcd5538555e5a9319eb4e92c31 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 218 1.5E-9 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_0894 bca7aefcd5538555e5a9319eb4e92c31 233 Gene3D G3DSA:3.40.50.2300 1 123 3.1E-29 T 18-10-2018 SHALO_0723 91a2d3b0185f400f5d9ad63c9ba57c13 442 Pfam PF00375 Sodium:dicarboxylate symporter family 22 416 8.6E-87 T 18-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 SHALO_0723 91a2d3b0185f400f5d9ad63c9ba57c13 442 SUPERFAMILY SSF118215 22 417 2.35E-92 T 18-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 SHALO_0723 91a2d3b0185f400f5d9ad63c9ba57c13 442 PRINTS PR00173 Glutamate-aspartate symporter signature 307 333 3.8E-23 T 18-10-2018 SHALO_0723 91a2d3b0185f400f5d9ad63c9ba57c13 442 PRINTS PR00173 Glutamate-aspartate symporter signature 342 361 3.8E-23 T 18-10-2018 SHALO_0723 91a2d3b0185f400f5d9ad63c9ba57c13 442 PRINTS PR00173 Glutamate-aspartate symporter signature 16 36 3.8E-23 T 18-10-2018 SHALO_0723 91a2d3b0185f400f5d9ad63c9ba57c13 442 PRINTS PR00173 Glutamate-aspartate symporter signature 207 226 3.8E-23 T 18-10-2018 SHALO_0723 91a2d3b0185f400f5d9ad63c9ba57c13 442 PRINTS PR00173 Glutamate-aspartate symporter signature 87 112 3.8E-23 T 18-10-2018 SHALO_0723 91a2d3b0185f400f5d9ad63c9ba57c13 442 PRINTS PR00173 Glutamate-aspartate symporter signature 57 77 3.8E-23 T 18-10-2018 SHALO_0723 91a2d3b0185f400f5d9ad63c9ba57c13 442 Gene3D G3DSA:1.10.3860.10 6 435 7.7E-100 T 18-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 SHALO_2010 582d0622d793812fc34d5225dddefd95 154 Hamap MF_00023 SsrA-binding protein [smpB]. 1 153 62.384 T 18-10-2018 IPR000037 SsrA-binding protein GO:0003723 SHALO_2010 582d0622d793812fc34d5225dddefd95 154 TIGRFAM TIGR00086 smpB: SsrA-binding protein 5 148 3.2E-55 T 18-10-2018 IPR000037 SsrA-binding protein GO:0003723 SHALO_2010 582d0622d793812fc34d5225dddefd95 154 SUPERFAMILY SSF74982 5 130 2.35E-43 T 18-10-2018 IPR023620 Small protein B SHALO_2010 582d0622d793812fc34d5225dddefd95 154 ProSitePatterns PS01317 SsrA-binding protein. 23 35 - T 18-10-2018 IPR020081 SsrA-binding protein, conserved site SHALO_2010 582d0622d793812fc34d5225dddefd95 154 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 5 130 2.0E-44 T 18-10-2018 IPR000037 SsrA-binding protein GO:0003723 SHALO_2010 582d0622d793812fc34d5225dddefd95 154 Gene3D G3DSA:2.40.280.10 2 126 3.8E-45 T 18-10-2018 IPR023620 Small protein B SHALO_2010 582d0622d793812fc34d5225dddefd95 154 Pfam PF01668 SmpB protein 5 149 2.7E-55 T 18-10-2018 IPR000037 SsrA-binding protein GO:0003723 SHALO_0654 c1bd1d17bb3ba0a2917c608cd0fda52d 263 Pfam PF00795 Carbon-nitrogen hydrolase 29 248 2.1E-13 T 18-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 SHALO_0654 c1bd1d17bb3ba0a2917c608cd0fda52d 263 Gene3D G3DSA:3.60.110.10 1 262 4.6E-33 T 18-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily SHALO_0654 c1bd1d17bb3ba0a2917c608cd0fda52d 263 SUPERFAMILY SSF56317 1 253 1.31E-40 T 18-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily SHALO_1475 4f1b2896b1783afb0473f0decd397642 240 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 3 240 5.7E-104 T 18-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 SHALO_1475 4f1b2896b1783afb0473f0decd397642 240 Pfam PF00005 ABC transporter 20 165 9.0E-35 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_1475 4f1b2896b1783afb0473f0decd397642 240 SMART SM00382 28 212 3.0E-9 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_1475 4f1b2896b1783afb0473f0decd397642 240 Gene3D G3DSA:3.40.50.300 2 240 1.1E-69 T 18-10-2018 SHALO_1475 4f1b2896b1783afb0473f0decd397642 240 SUPERFAMILY SSF52540 3 235 2.59E-67 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_1871 9f379d7ff15d0f65517b9215e58f3ac5 755 TIGRFAM TIGR02398 gluc_glyc_Psyn: glucosylglycerol-phosphate synthase 269 753 2.5E-200 T 18-10-2018 IPR012764 Glucosylglycerol-phosphate synthase GO:0016758|GO:0051473 MetaCyc: PWY-7902 SHALO_1871 9f379d7ff15d0f65517b9215e58f3ac5 755 ProSitePatterns PS01228 Hypothetical cof family signature 1. 17 28 - T 18-10-2018 SHALO_1871 9f379d7ff15d0f65517b9215e58f3ac5 755 Pfam PF00982 Glycosyltransferase family 20 266 747 2.1E-134 T 18-10-2018 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 KEGG: 00500+2.4.1.15 SHALO_1871 9f379d7ff15d0f65517b9215e58f3ac5 755 Pfam PF05116 Sucrose-6F-phosphate phosphohydrolase 16 249 8.4E-50 T 18-10-2018 IPR006380 Sucrose-phosphatase-like, N-terminal SHALO_1871 9f379d7ff15d0f65517b9215e58f3ac5 755 Gene3D G3DSA:3.40.50.2000 290 745 6.0E-146 T 18-10-2018 SHALO_1871 9f379d7ff15d0f65517b9215e58f3ac5 755 Gene3D G3DSA:3.40.50.1000 17 246 3.8E-51 T 18-10-2018 IPR023214 HAD superfamily SHALO_1871 9f379d7ff15d0f65517b9215e58f3ac5 755 SUPERFAMILY SSF56784 17 222 5.32E-27 T 18-10-2018 IPR036412 HAD-like superfamily SHALO_1871 9f379d7ff15d0f65517b9215e58f3ac5 755 SUPERFAMILY SSF53756 264 746 5.02E-126 T 18-10-2018 SHALO_1871 9f379d7ff15d0f65517b9215e58f3ac5 755 Gene3D G3DSA:3.40.50.2000 525 734 6.0E-146 T 18-10-2018 SHALO_1871 9f379d7ff15d0f65517b9215e58f3ac5 755 Gene3D G3DSA:3.90.1070.10 104 168 3.8E-51 T 18-10-2018 SHALO_0290 ca3bd68811dbad76124355843df10c67 120 Gene3D G3DSA:3.30.420.40 2 96 2.1E-5 T 18-10-2018 SHALO_0290 ca3bd68811dbad76124355843df10c67 120 SUPERFAMILY SSF53067 4 62 1.62E-8 T 18-10-2018 SHALO_2599 4214a050602daf92086592738d82cc90 351 SUPERFAMILY SSF53807 33 344 5.89E-54 T 18-10-2018 SHALO_2599 4214a050602daf92086592738d82cc90 351 Gene3D G3DSA:3.40.50.1980 21 348 2.0E-73 T 18-10-2018 SHALO_2599 4214a050602daf92086592738d82cc90 351 Pfam PF01497 Periplasmic binding protein 92 283 1.7E-24 T 18-10-2018 IPR002491 ABC transporter periplasmic binding domain SHALO_0479 e2360b07734b1338173de5a6ca9b0e77 1385 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1375 11.545 T 18-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_0479 e2360b07734b1338173de5a6ca9b0e77 1385 Gene3D G3DSA:3.90.1110.10 160 252 8.9E-24 T 18-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_0479 e2360b07734b1338173de5a6ca9b0e77 1385 Gene3D G3DSA:2.40.50.100 731 806 3.8E-23 T 18-10-2018 SHALO_0479 e2360b07734b1338173de5a6ca9b0e77 1385 Pfam PF10385 RNA polymerase beta subunit external 1 domain 608 673 2.2E-17 T 18-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_0479 e2360b07734b1338173de5a6ca9b0e77 1385 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1094 1106 - T 18-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_0479 e2360b07734b1338173de5a6ca9b0e77 1385 Gene3D G3DSA:3.90.1100.10 364 660 1.1E-68 T 18-10-2018 SHALO_0479 e2360b07734b1338173de5a6ca9b0e77 1385 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 10 1372 0.0 T 18-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_0479 e2360b07734b1338173de5a6ca9b0e77 1385 Pfam PF04565 RNA polymerase Rpb2, domain 3 530 598 1.8E-31 T 18-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_0479 e2360b07734b1338173de5a6ca9b0e77 1385 SUPERFAMILY SSF64484 12 1375 0.0 T 18-10-2018 SHALO_0479 e2360b07734b1338173de5a6ca9b0e77 1385 Pfam PF04563 RNA polymerase beta subunit 27 517 1.6E-21 T 18-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_0479 e2360b07734b1338173de5a6ca9b0e77 1385 Pfam PF04560 RNA polymerase Rpb2, domain 7 1299 1374 6.0E-24 T 18-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_0479 e2360b07734b1338173de5a6ca9b0e77 1385 Gene3D G3DSA:3.90.1100.10 664 730 2.0E-18 T 18-10-2018 SHALO_0479 e2360b07734b1338173de5a6ca9b0e77 1385 Gene3D G3DSA:3.90.1100.10 18 159 3.3E-51 T 18-10-2018 SHALO_0479 e2360b07734b1338173de5a6ca9b0e77 1385 Pfam PF04561 RNA polymerase Rpb2, domain 2 155 228 2.8E-12 T 18-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_0479 e2360b07734b1338173de5a6ca9b0e77 1385 Pfam PF04561 RNA polymerase Rpb2, domain 2 375 469 2.6E-17 T 18-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_0479 e2360b07734b1338173de5a6ca9b0e77 1385 Gene3D G3DSA:3.90.1800.10 1285 1358 7.0E-10 T 18-10-2018 SHALO_0479 e2360b07734b1338173de5a6ca9b0e77 1385 Pfam PF00562 RNA polymerase Rpb2, domain 6 735 1296 1.3E-144 T 18-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_0479 e2360b07734b1338173de5a6ca9b0e77 1385 Gene3D G3DSA:2.40.270.10 807 846 6.5E-6 T 18-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_0479 e2360b07734b1338173de5a6ca9b0e77 1385 Gene3D G3DSA:2.40.270.10 1067 1275 1.8E-73 T 18-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_0479 e2360b07734b1338173de5a6ca9b0e77 1385 Gene3D G3DSA:2.40.50.150 847 966 3.9E-36 T 18-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_0961 0e2ecca8ebf48925a19b8cab5882c80e 778 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 142 778 2.1E-94 T 18-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 SHALO_0961 0e2ecca8ebf48925a19b8cab5882c80e 778 Gene3D G3DSA:2.170.130.10 118 246 1.1E-31 T 18-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily SHALO_0961 0e2ecca8ebf48925a19b8cab5882c80e 778 SUPERFAMILY SSF56935 101 778 1.68E-113 T 18-10-2018 SHALO_0961 0e2ecca8ebf48925a19b8cab5882c80e 778 Pfam PF07715 TonB-dependent Receptor Plug Domain 140 236 1.4E-14 T 18-10-2018 IPR012910 TonB-dependent receptor, plug domain SHALO_0961 0e2ecca8ebf48925a19b8cab5882c80e 778 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 761 778 - T 18-10-2018 IPR010917 TonB-dependent receptor, conserved site SHALO_0961 0e2ecca8ebf48925a19b8cab5882c80e 778 Pfam PF00593 TonB dependent receptor 340 777 9.9E-47 T 18-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel SHALO_0961 0e2ecca8ebf48925a19b8cab5882c80e 778 SMART SM00965 48 98 5.3E-4 T 18-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 SHALO_0961 0e2ecca8ebf48925a19b8cab5882c80e 778 Gene3D G3DSA:3.55.50.30 23 117 4.2E-10 T 18-10-2018 SHALO_0961 0e2ecca8ebf48925a19b8cab5882c80e 778 Gene3D G3DSA:2.40.170.20 249 778 2.0E-153 T 18-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily SHALO_0199 c41e2a90de2c04eb89d4b91a836c2954 289 Pfam PF01040 UbiA prenyltransferase family 24 272 7.6E-45 T 18-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 SHALO_0199 c41e2a90de2c04eb89d4b91a836c2954 289 TIGRFAM TIGR01475 ubiA_other: putative 4-hydroxybenzoate polyprenyltransferase 7 288 3.8E-94 T 18-10-2018 IPR006371 4-hydroxybenzoate polyprenyltransferase-related SHALO_0199 c41e2a90de2c04eb89d4b91a836c2954 289 Gene3D G3DSA:1.10.357.140 14 185 2.3E-44 T 18-10-2018 SHALO_1766 30afaa48ed98c2ace66741ed348349d4 217 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 38 163 1.8E-31 T 18-10-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 SHALO_1766 30afaa48ed98c2ace66741ed348349d4 217 SUPERFAMILY SSF69593 5 209 1.05E-32 T 18-10-2018 SHALO_1766 30afaa48ed98c2ace66741ed348349d4 217 Pfam PF01553 Acyltransferase 50 163 1.4E-21 T 18-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 SHALO_1766 30afaa48ed98c2ace66741ed348349d4 217 SMART SM00563 52 166 1.9E-29 T 18-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 SHALO_0956 b2b4782956897ef1939993b8419574c9 178 Gene3D G3DSA:3.30.450.20 10 176 1.2E-22 T 18-10-2018 SHALO_0956 b2b4782956897ef1939993b8419574c9 178 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 23 103 1.0E-14 T 18-10-2018 IPR000014 PAS domain SHALO_0956 b2b4782956897ef1939993b8419574c9 178 Pfam PF08447 PAS fold 30 110 5.6E-16 T 18-10-2018 IPR013655 PAS fold-3 GO:0005515 SHALO_0956 b2b4782956897ef1939993b8419574c9 178 SMART SM00091 6 73 1.2E-5 T 18-10-2018 IPR000014 PAS domain SHALO_0956 b2b4782956897ef1939993b8419574c9 178 SUPERFAMILY SSF55785 19 107 2.58E-25 T 18-10-2018 IPR035965 PAS domain superfamily SHALO_2417 fa036c03a3f3e55845d0da9fee1b7b95 420 Gene3D G3DSA:1.10.3370.10 1 412 3.2E-138 T 18-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 SHALO_2417 fa036c03a3f3e55845d0da9fee1b7b95 420 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 7 411 9.7E-105 T 18-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 SHALO_2417 fa036c03a3f3e55845d0da9fee1b7b95 420 PRINTS PR00303 Preprotein translocase SecY subunit signature 259 278 1.1E-85 T 18-10-2018 SHALO_2417 fa036c03a3f3e55845d0da9fee1b7b95 420 PRINTS PR00303 Preprotein translocase SecY subunit signature 353 371 1.1E-85 T 18-10-2018 SHALO_2417 fa036c03a3f3e55845d0da9fee1b7b95 420 PRINTS PR00303 Preprotein translocase SecY subunit signature 101 124 1.1E-85 T 18-10-2018 SHALO_2417 fa036c03a3f3e55845d0da9fee1b7b95 420 PRINTS PR00303 Preprotein translocase SecY subunit signature 385 403 1.1E-85 T 18-10-2018 SHALO_2417 fa036c03a3f3e55845d0da9fee1b7b95 420 PRINTS PR00303 Preprotein translocase SecY subunit signature 298 320 1.1E-85 T 18-10-2018 SHALO_2417 fa036c03a3f3e55845d0da9fee1b7b95 420 PRINTS PR00303 Preprotein translocase SecY subunit signature 9 27 1.1E-85 T 18-10-2018 SHALO_2417 fa036c03a3f3e55845d0da9fee1b7b95 420 PRINTS PR00303 Preprotein translocase SecY subunit signature 61 81 1.1E-85 T 18-10-2018 SHALO_2417 fa036c03a3f3e55845d0da9fee1b7b95 420 PRINTS PR00303 Preprotein translocase SecY subunit signature 141 166 1.1E-85 T 18-10-2018 SHALO_2417 fa036c03a3f3e55845d0da9fee1b7b95 420 PRINTS PR00303 Preprotein translocase SecY subunit signature 167 190 1.1E-85 T 18-10-2018 SHALO_2417 fa036c03a3f3e55845d0da9fee1b7b95 420 ProSitePatterns PS00755 Protein secY signature 1. 62 81 - T 18-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 SHALO_2417 fa036c03a3f3e55845d0da9fee1b7b95 420 SUPERFAMILY SSF103491 4 407 2.48E-108 T 18-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 SHALO_2417 fa036c03a3f3e55845d0da9fee1b7b95 420 Hamap MF_01465 Protein translocase subunit SecY [secY]. 1 416 26.877 T 18-10-2018 IPR026593 Protein translocase subunit SecY SHALO_2417 fa036c03a3f3e55845d0da9fee1b7b95 420 PIRSF PIRSF004557 1 419 1.2E-119 T 18-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 SHALO_2417 fa036c03a3f3e55845d0da9fee1b7b95 420 ProSitePatterns PS00756 Protein secY signature 2. 160 177 - T 18-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 SHALO_2417 fa036c03a3f3e55845d0da9fee1b7b95 420 Pfam PF00344 SecY translocase 62 400 1.2E-98 T 18-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 SHALO_1064 02e3f129c0da9b18f5dc3add4c02714a 488 Pfam PF13250 Domain of unknown function (DUF4041) 211 266 3.7E-14 T 18-10-2018 IPR025280 Domain of unknown function DUF4041 SHALO_1064 02e3f129c0da9b18f5dc3add4c02714a 488 SMART SM00974 381 464 2.8E-33 T 18-10-2018 IPR018306 Bacteriophage T5, Orf172 DNA-binding SHALO_1064 02e3f129c0da9b18f5dc3add4c02714a 488 SUPERFAMILY SSF103657 203 397 5.75E-6 T 18-10-2018 IPR027267 AH/BAR domain superfamily SHALO_1064 02e3f129c0da9b18f5dc3add4c02714a 488 Pfam PF13455 Meiotically up-regulated gene 113 387 463 5.2E-16 T 18-10-2018 SHALO_1109 df256dbec0b41ddcd1ddc1353615622f 433 Pfam PF00675 Insulinase (Peptidase family M16) 34 174 9.2E-13 T 18-10-2018 IPR011765 Peptidase M16, N-terminal SHALO_1109 df256dbec0b41ddcd1ddc1353615622f 433 SUPERFAMILY SSF63411 32 223 6.5E-33 T 18-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SHALO_1109 df256dbec0b41ddcd1ddc1353615622f 433 Gene3D G3DSA:3.30.830.10 241 432 7.7E-41 T 18-10-2018 SHALO_1109 df256dbec0b41ddcd1ddc1353615622f 433 Gene3D G3DSA:3.30.830.10 28 234 2.1E-34 T 18-10-2018 SHALO_1109 df256dbec0b41ddcd1ddc1353615622f 433 SUPERFAMILY SSF63411 246 432 2.0E-36 T 18-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SHALO_1109 df256dbec0b41ddcd1ddc1353615622f 433 Pfam PF05193 Peptidase M16 inactive domain 187 361 2.0E-26 T 18-10-2018 IPR007863 Peptidase M16, C-terminal SHALO_2749 cc337ce892d96b5e403cf06444466dd2 315 Gene3D G3DSA:3.55.50.30 241 314 3.9E-7 T 18-10-2018 SHALO_2749 cc337ce892d96b5e403cf06444466dd2 315 PIRSF PIRSF018266 1 314 1.0E-67 T 18-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component SHALO_2749 cc337ce892d96b5e403cf06444466dd2 315 Gene3D G3DSA:2.60.120.1440 105 239 8.5E-30 T 18-10-2018 SHALO_2749 cc337ce892d96b5e403cf06444466dd2 315 Pfam PF04773 FecR protein 111 199 7.2E-20 T 18-10-2018 IPR006860 FecR protein SHALO_2749 cc337ce892d96b5e403cf06444466dd2 315 Pfam PF16344 Domain of unknown function (DUF4974) 212 307 1.0E-12 T 18-10-2018 IPR032508 Protein FecR, C-terminal SHALO_2749 cc337ce892d96b5e403cf06444466dd2 315 Pfam PF16220 Domain of unknown function (DUF4880) 18 48 1.6E-8 T 18-10-2018 IPR032623 FecR, N-terminal SHALO_2646 cd055b64c82ccf25f4d3ee0e306744c2 380 Pfam PF07690 Major Facilitator Superfamily 15 231 1.6E-31 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SHALO_2646 cd055b64c82ccf25f4d3ee0e306744c2 380 SUPERFAMILY SSF103473 12 372 1.14E-56 T 18-10-2018 IPR036259 MFS transporter superfamily SHALO_2646 cd055b64c82ccf25f4d3ee0e306744c2 380 Gene3D G3DSA:1.20.1250.20 10 374 7.7E-62 T 18-10-2018 SHALO_2646 cd055b64c82ccf25f4d3ee0e306744c2 380 PRINTS PR01035 Tetracycline resistance protein signature 20 36 2.1E-14 T 18-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 SHALO_2646 cd055b64c82ccf25f4d3ee0e306744c2 380 PRINTS PR01035 Tetracycline resistance protein signature 133 155 2.1E-14 T 18-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 SHALO_2646 cd055b64c82ccf25f4d3ee0e306744c2 380 PRINTS PR01035 Tetracycline resistance protein signature 161 181 2.1E-14 T 18-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 SHALO_0488 19dc3c88d69e188ac03083b6c752c82f 150 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 48 1.8E-14 T 18-10-2018 SHALO_0488 19dc3c88d69e188ac03083b6c752c82f 150 SUPERFAMILY SSF46785 1 59 1.42E-15 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SHALO_0488 19dc3c88d69e188ac03083b6c752c82f 150 SMART SM00344 1 111 3.9E-28 T 18-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 SHALO_0488 19dc3c88d69e188ac03083b6c752c82f 150 Gene3D G3DSA:1.10.10.10 1 51 1.4E-19 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_0488 19dc3c88d69e188ac03083b6c752c82f 150 Gene3D G3DSA:3.30.70.920 52 147 4.8E-19 T 18-10-2018 SHALO_0488 19dc3c88d69e188ac03083b6c752c82f 150 SUPERFAMILY SSF54909 63 146 1.14E-12 T 18-10-2018 IPR011008 Dimeric alpha-beta barrel SHALO_0488 19dc3c88d69e188ac03083b6c752c82f 150 Pfam PF01037 Lrp/AsnC ligand binding domain 69 141 3.3E-10 T 18-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain SHALO_0488 19dc3c88d69e188ac03083b6c752c82f 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 2.5E-11 T 18-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 SHALO_0488 19dc3c88d69e188ac03083b6c752c82f 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 2.5E-11 T 18-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 SHALO_0488 19dc3c88d69e188ac03083b6c752c82f 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 2.5E-11 T 18-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 SHALO_0712 e74f00564ccc4501efcf6782a8d020fd 160 PIRSF PIRSF004633 1 160 2.8E-46 T 18-10-2018 IPR014419 Heme utilization protein with pyridoxamine 5'-phosphate domain SHALO_0712 e74f00564ccc4501efcf6782a8d020fd 160 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 1 87 1.3E-12 T 18-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 SHALO_0712 e74f00564ccc4501efcf6782a8d020fd 160 Gene3D G3DSA:2.30.110.10 1 160 1.9E-46 T 18-10-2018 IPR012349 FMN-binding split barrel GO:0048037 SHALO_0712 e74f00564ccc4501efcf6782a8d020fd 160 SUPERFAMILY SSF50475 2 144 7.48E-27 T 18-10-2018 SHALO_0544 a3e7bbe03adfeeb515edf828204a3d98 239 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 6 111 5.5E-29 T 18-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_0544 a3e7bbe03adfeeb515edf828204a3d98 239 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 57 65 - T 18-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 SHALO_0544 a3e7bbe03adfeeb515edf828204a3d98 239 Pfam PF13183 4Fe-4S dicluster domain 147 221 4.5E-9 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_0544 a3e7bbe03adfeeb515edf828204a3d98 239 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 151 162 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_0544 a3e7bbe03adfeeb515edf828204a3d98 239 SUPERFAMILY SSF54292 2 106 3.28E-25 T 18-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 SHALO_0544 a3e7bbe03adfeeb515edf828204a3d98 239 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 11 230 2.9E-50 T 18-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_0544 a3e7bbe03adfeeb515edf828204a3d98 239 Gene3D G3DSA:1.10.1060.10 107 239 6.9E-45 T 18-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 SHALO_0544 a3e7bbe03adfeeb515edf828204a3d98 239 SUPERFAMILY SSF46548 109 236 3.49E-25 T 18-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 SHALO_0544 a3e7bbe03adfeeb515edf828204a3d98 239 Gene3D G3DSA:3.10.20.30 1 106 8.2E-31 T 18-10-2018 IPR012675 Beta-grasp domain superfamily SHALO_0921 18bfc9336deb0c7c758e060677265ed9 442 TIGRFAM TIGR04282 glyco_like_cofC: transferase 1, rSAM/selenodomain-associated 6 191 2.8E-52 T 18-10-2018 IPR018641 Transferase 1, rSAM/selenodomain-associated SHALO_0921 18bfc9336deb0c7c758e060677265ed9 442 Pfam PF09837 Uncharacterized protein conserved in bacteria (DUF2064) 49 160 1.1E-29 T 18-10-2018 IPR018641 Transferase 1, rSAM/selenodomain-associated SHALO_0921 18bfc9336deb0c7c758e060677265ed9 442 Gene3D G3DSA:3.90.550.10 1 216 1.1E-59 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_0921 18bfc9336deb0c7c758e060677265ed9 442 SUPERFAMILY SSF53448 212 415 7.88E-28 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_0921 18bfc9336deb0c7c758e060677265ed9 442 TIGRFAM TIGR04283 glyco_like_mftF: transferase 2, rSAM/selenodomain-associated 217 436 7.2E-68 T 18-10-2018 IPR026461 Transferase 2, rSAM/selenodomain-associated SHALO_0921 18bfc9336deb0c7c758e060677265ed9 442 Pfam PF00535 Glycosyl transferase family 2 218 339 3.8E-14 T 18-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 SHALO_0921 18bfc9336deb0c7c758e060677265ed9 442 Gene3D G3DSA:3.90.550.10 217 394 3.3E-15 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_0921 18bfc9336deb0c7c758e060677265ed9 442 SUPERFAMILY SSF53448 8 194 1.03E-27 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_0756 54e428aaa9cd8872c09cc3933f1b3fcb 206 Pfam PF01634 ATP phosphoribosyltransferase 47 199 7.0E-50 T 18-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 SHALO_0756 54e428aaa9cd8872c09cc3933f1b3fcb 206 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 1 203 49.757 T 18-10-2018 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 SHALO_0756 54e428aaa9cd8872c09cc3933f1b3fcb 206 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 138 159 - T 18-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 SHALO_0756 54e428aaa9cd8872c09cc3933f1b3fcb 206 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 2 179 2.1E-58 T 18-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 SHALO_0756 54e428aaa9cd8872c09cc3933f1b3fcb 206 Gene3D G3DSA:3.40.190.10 88 171 2.1E-66 T 18-10-2018 SHALO_0756 54e428aaa9cd8872c09cc3933f1b3fcb 206 Gene3D G3DSA:3.40.190.10 3 193 2.1E-66 T 18-10-2018 SHALO_0756 54e428aaa9cd8872c09cc3933f1b3fcb 206 SUPERFAMILY SSF53850 1 202 1.41E-61 T 18-10-2018 SHALO_1270 5c8a976ad0c87271b4cfbd295259329a 349 SUPERFAMILY SSF55874 211 343 8.12E-23 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_1270 5c8a976ad0c87271b4cfbd295259329a 349 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 248 347 2.5E-14 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_1270 5c8a976ad0c87271b4cfbd295259329a 349 SMART SM00387 247 347 2.3E-17 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_1270 5c8a976ad0c87271b4cfbd295259329a 349 SUPERFAMILY SSF47384 138 200 1.26E-5 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SHALO_1270 5c8a976ad0c87271b4cfbd295259329a 349 Gene3D G3DSA:3.30.565.10 210 348 2.7E-22 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_1270 5c8a976ad0c87271b4cfbd295259329a 349 Gene3D G3DSA:1.10.287.130 141 208 4.2E-5 T 18-10-2018 SHALO_0660 5b6ab8fc368bb1196ae48ddabc1e2044 370 SUPERFAMILY SSF53187 5 365 1.76E-53 T 18-10-2018 SHALO_0660 5b6ab8fc368bb1196ae48ddabc1e2044 370 Gene3D G3DSA:3.30.70.360 172 283 2.7E-97 T 18-10-2018 SHALO_0660 5b6ab8fc368bb1196ae48ddabc1e2044 370 Pfam PF07687 Peptidase dimerisation domain 168 269 4.6E-17 T 18-10-2018 IPR011650 Peptidase M20, dimerisation domain SHALO_0660 5b6ab8fc368bb1196ae48ddabc1e2044 370 Gene3D G3DSA:3.40.630.10 10 354 2.7E-97 T 18-10-2018 SHALO_0660 5b6ab8fc368bb1196ae48ddabc1e2044 370 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 6 365 8.8E-126 T 18-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 SHALO_0660 5b6ab8fc368bb1196ae48ddabc1e2044 370 SUPERFAMILY SSF55031 172 272 8.37E-22 T 18-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain SHALO_0660 5b6ab8fc368bb1196ae48ddabc1e2044 370 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 2 367 42.813 T 18-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 SHALO_0660 5b6ab8fc368bb1196ae48ddabc1e2044 370 Pfam PF01546 Peptidase family M20/M25/M40 61 364 8.4E-36 T 18-10-2018 IPR002933 Peptidase M20 GO:0016787 SHALO_1111 b4804c760eddf130fed036e7e5ad7714 170 Gene3D G3DSA:3.30.505.50 128 170 6.9E-8 T 18-10-2018 IPR038416 Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily SHALO_1111 b4804c760eddf130fed036e7e5ad7714 170 SUPERFAMILY SSF69754 1 105 1.7E-20 T 18-10-2018 IPR036567 Ribosome hibernation promotion factor-like SHALO_1111 b4804c760eddf130fed036e7e5ad7714 170 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 103 9.6E-16 T 18-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 SHALO_1111 b4804c760eddf130fed036e7e5ad7714 170 Gene3D G3DSA:3.30.160.100 1 108 4.0E-19 T 18-10-2018 IPR036567 Ribosome hibernation promotion factor-like SHALO_1111 b4804c760eddf130fed036e7e5ad7714 170 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 97 2.7E-17 T 18-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 SHALO_1111 b4804c760eddf130fed036e7e5ad7714 170 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 116 169 1.1E-12 T 18-10-2018 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal SHALO_1036 78d34bac8bac528bb2ec69e49b87a520 629 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 519 626 2.9E-14 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_1036 78d34bac8bac528bb2ec69e49b87a520 629 Pfam PF07695 7TM diverse intracellular signalling 180 373 6.6E-24 T 18-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 SHALO_1036 78d34bac8bac528bb2ec69e49b87a520 629 Gene3D G3DSA:2.60.40.2380 33 167 2.7E-18 T 18-10-2018 SHALO_1036 78d34bac8bac528bb2ec69e49b87a520 629 Pfam PF07696 7TMR-DISM extracellular 2 39 162 9.0E-15 T 18-10-2018 IPR011622 7TM-DISM receptor, extracellular domain, type 2 SHALO_1036 78d34bac8bac528bb2ec69e49b87a520 629 SMART SM00387 518 628 1.2E-12 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_1036 78d34bac8bac528bb2ec69e49b87a520 629 Gene3D G3DSA:3.30.565.10 478 628 2.3E-26 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_1036 78d34bac8bac528bb2ec69e49b87a520 629 SUPERFAMILY SSF55874 477 626 1.57E-25 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_1036 78d34bac8bac528bb2ec69e49b87a520 629 Gene3D G3DSA:1.10.287.130 391 474 5.9E-6 T 18-10-2018 SHALO_2837 c108a78994ac7263a7a5dd0dfe6ba6f8 167 SUPERFAMILY SSF52218 6 146 8.21E-22 T 18-10-2018 IPR029039 Flavoprotein-like superfamily SHALO_2837 c108a78994ac7263a7a5dd0dfe6ba6f8 167 Gene3D G3DSA:3.40.50.360 3 167 1.1E-25 T 18-10-2018 IPR029039 Flavoprotein-like superfamily SHALO_2837 c108a78994ac7263a7a5dd0dfe6ba6f8 167 Pfam PF03358 NADPH-dependent FMN reductase 4 143 1.3E-22 T 18-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 SHALO_2836 005e98a199b2faf9cc5800274e1cbe88 133 Pfam PF13673 Acetyltransferase (GNAT) domain 27 128 1.5E-16 T 18-10-2018 IPR000182 GNAT domain SHALO_2836 005e98a199b2faf9cc5800274e1cbe88 133 Gene3D G3DSA:3.40.630.30 1 133 2.4E-29 T 18-10-2018 SHALO_2836 005e98a199b2faf9cc5800274e1cbe88 133 SUPERFAMILY SSF55729 6 132 1.15E-24 T 18-10-2018 IPR016181 Acyl-CoA N-acyltransferase SHALO_1580 b1737936fb4e28da7ab07a0abf160217 411 Gene3D G3DSA:3.40.309.10 221 368 6.7E-165 T 18-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 SHALO_1580 b1737936fb4e28da7ab07a0abf160217 411 PIRSF PIRSF000151 1 411 5.0E-175 T 18-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 SHALO_1580 b1737936fb4e28da7ab07a0abf160217 411 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 1 410 39.493 T 18-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 SHALO_1580 b1737936fb4e28da7ab07a0abf160217 411 SUPERFAMILY SSF53720 2 410 5.5E-115 T 18-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 SHALO_1580 b1737936fb4e28da7ab07a0abf160217 411 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 317 338 - T 18-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 SHALO_1580 b1737936fb4e28da7ab07a0abf160217 411 Gene3D G3DSA:3.40.605.10 13 405 6.7E-165 T 18-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 SHALO_1580 b1737936fb4e28da7ab07a0abf160217 411 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 8 400 3.8E-151 T 18-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 SHALO_1580 b1737936fb4e28da7ab07a0abf160217 411 Pfam PF00171 Aldehyde dehydrogenase family 2 278 3.5E-18 T 18-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 SHALO_2428 6f83e49111eee4dab2fd459541edf4da 62 Pfam PF00831 Ribosomal L29 protein 5 58 1.2E-17 T 18-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_2428 6f83e49111eee4dab2fd459541edf4da 62 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 15.147 T 18-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_2428 6f83e49111eee4dab2fd459541edf4da 62 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 18-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_2428 6f83e49111eee4dab2fd459541edf4da 62 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 59 5.8E-20 T 18-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_2428 6f83e49111eee4dab2fd459541edf4da 62 SUPERFAMILY SSF46561 1 59 2.88E-16 T 18-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_2428 6f83e49111eee4dab2fd459541edf4da 62 Gene3D G3DSA:1.10.287.310 1 62 2.4E-17 T 18-10-2018 SHALO_0281 7d3ad29ac30cb71900716b19ab8a8e77 111 TIGRFAM TIGR00526 folB_dom: FolB domain 2 110 9.5E-18 T 18-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 SHALO_0281 7d3ad29ac30cb71900716b19ab8a8e77 111 SUPERFAMILY SSF55620 3 101 3.45E-19 T 18-10-2018 SHALO_0281 7d3ad29ac30cb71900716b19ab8a8e77 111 Gene3D G3DSA:3.30.1130.10 1 106 3.8E-13 T 18-10-2018 SHALO_0281 7d3ad29ac30cb71900716b19ab8a8e77 111 SMART SM00905 3 106 1.1E-18 T 18-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 SHALO_0281 7d3ad29ac30cb71900716b19ab8a8e77 111 Pfam PF02152 Dihydroneopterin aldolase 3 103 2.1E-16 T 18-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 SHALO_0252 d684601e4b634fc9ba286b43202d2a07 400 Gene3D G3DSA:3.40.50.300 115 373 7.2E-93 T 18-10-2018 SHALO_0252 d684601e4b634fc9ba286b43202d2a07 400 Pfam PF00437 Type II/IV secretion system protein 92 285 5.0E-44 T 18-10-2018 IPR001482 Type II/IV secretion system protein SHALO_0252 d684601e4b634fc9ba286b43202d2a07 400 SMART SM00382 137 262 5.1E-5 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_0252 d684601e4b634fc9ba286b43202d2a07 400 SUPERFAMILY SSF52540 19 351 4.35E-63 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0252 d684601e4b634fc9ba286b43202d2a07 400 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 20 359 6.3E-126 T 18-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 SHALO_0252 d684601e4b634fc9ba286b43202d2a07 400 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 208 222 - T 18-10-2018 IPR001482 Type II/IV secretion system protein SHALO_0252 d684601e4b634fc9ba286b43202d2a07 400 Gene3D G3DSA:3.30.450.90 9 114 3.6E-20 T 18-10-2018 SHALO_2704 4f534027bd8ed1a0c9d4eb3cbac4706f 239 Gene3D G3DSA:3.40.30.10 112 239 2.2E-33 T 18-10-2018 SHALO_2704 4f534027bd8ed1a0c9d4eb3cbac4706f 239 SUPERFAMILY SSF52833 103 232 6.8E-17 T 18-10-2018 IPR036249 Thioredoxin-like superfamily SHALO_2704 4f534027bd8ed1a0c9d4eb3cbac4706f 239 Pfam PF13098 Thioredoxin-like domain 124 200 9.4E-7 T 18-10-2018 IPR012336 Thioredoxin-like fold SHALO_2172 a64c87f087f739c3587625d65dec30c2 452 Pfam PF02321 Outer membrane efflux protein 53 234 1.9E-26 T 18-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 SHALO_2172 a64c87f087f739c3587625d65dec30c2 452 Pfam PF02321 Outer membrane efflux protein 262 441 1.0E-30 T 18-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 SHALO_2172 a64c87f087f739c3587625d65dec30c2 452 SUPERFAMILY SSF56954 9 443 6.02E-89 T 18-10-2018 SHALO_2172 a64c87f087f739c3587625d65dec30c2 452 Gene3D G3DSA:1.20.1600.10 51 450 9.8E-92 T 18-10-2018 SHALO_2172 a64c87f087f739c3587625d65dec30c2 452 PIRSF PIRSF001892 18 449 1.1E-119 T 18-10-2018 IPR028351 Cyclolysin transport protein CyaE GO:0005215 SHALO_0513 07923e9250b81e9fd104e0fd089a3006 172 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 39 147 3.2E-23 T 18-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0513 07923e9250b81e9fd104e0fd089a3006 172 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 3 153 41.111 T 18-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0513 07923e9250b81e9fd104e0fd089a3006 172 Gene3D G3DSA:3.40.50.12280 4 168 1.3E-68 T 18-10-2018 SHALO_0513 07923e9250b81e9fd104e0fd089a3006 172 SUPERFAMILY SSF56770 12 154 5.49E-62 T 18-10-2018 SHALO_0513 07923e9250b81e9fd104e0fd089a3006 172 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 13 150 2.0E-65 T 18-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_2421 2d1a6b9a1af759dc38e79a4ee7c9e369 178 Gene3D G3DSA:3.90.930.12 83 178 1.1E-36 T 18-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_2421 2d1a6b9a1af759dc38e79a4ee7c9e369 178 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 175 33.49 T 18-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SHALO_2421 2d1a6b9a1af759dc38e79a4ee7c9e369 178 PIRSF PIRSF002162 1 176 1.7E-41 T 18-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_2421 2d1a6b9a1af759dc38e79a4ee7c9e369 178 Gene3D G3DSA:3.90.930.12 1 82 4.0E-20 T 18-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_2421 2d1a6b9a1af759dc38e79a4ee7c9e369 178 SUPERFAMILY SSF56053 83 175 1.24E-33 T 18-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_2421 2d1a6b9a1af759dc38e79a4ee7c9e369 178 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 175 2.6E-65 T 18-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SHALO_2421 2d1a6b9a1af759dc38e79a4ee7c9e369 178 Pfam PF00347 Ribosomal protein L6 91 163 6.1E-21 T 18-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_2421 2d1a6b9a1af759dc38e79a4ee7c9e369 178 Pfam PF00347 Ribosomal protein L6 11 82 5.1E-8 T 18-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_2421 2d1a6b9a1af759dc38e79a4ee7c9e369 178 SUPERFAMILY SSF56053 2 82 1.85E-16 T 18-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_2421 2d1a6b9a1af759dc38e79a4ee7c9e369 178 PRINTS PR00059 Ribosomal protein L6 signature 71 96 5.6E-32 T 18-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SHALO_2421 2d1a6b9a1af759dc38e79a4ee7c9e369 178 PRINTS PR00059 Ribosomal protein L6 signature 99 115 5.6E-32 T 18-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SHALO_2421 2d1a6b9a1af759dc38e79a4ee7c9e369 178 PRINTS PR00059 Ribosomal protein L6 signature 140 161 5.6E-32 T 18-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SHALO_2421 2d1a6b9a1af759dc38e79a4ee7c9e369 178 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 153 161 - T 18-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_2820 c47c8f2bb58a99d5e809c3fbb5bc7851 244 Pfam PF01925 Sulfite exporter TauE/SafE 7 237 1.1E-27 T 18-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 SHALO_2651 14bcb873f7583df906c55b1e56c83c98 233 Gene3D G3DSA:1.10.3720.10 3 231 1.1E-29 T 18-10-2018 IPR035906 MetI-like superfamily SHALO_2651 14bcb873f7583df906c55b1e56c83c98 233 SUPERFAMILY SSF161098 13 225 2.35E-30 T 18-10-2018 IPR035906 MetI-like superfamily SHALO_2651 14bcb873f7583df906c55b1e56c83c98 233 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 230 4.0E-11 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 SHALO_0913 7aecbd6ca608eb3c46fd8375fa1cede9 272 SUPERFAMILY SSF52172 2 48 4.13E-5 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_0913 7aecbd6ca608eb3c46fd8375fa1cede9 272 Gene3D G3DSA:3.40.50.2300 43 172 8.8E-32 T 18-10-2018 SHALO_0913 7aecbd6ca608eb3c46fd8375fa1cede9 272 Gene3D G3DSA:1.10.10.10 174 272 1.4E-24 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_0913 7aecbd6ca608eb3c46fd8375fa1cede9 272 SUPERFAMILY SSF52172 49 175 5.98E-34 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_0913 7aecbd6ca608eb3c46fd8375fa1cede9 272 SMART SM00862 193 269 2.3E-16 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_0913 7aecbd6ca608eb3c46fd8375fa1cede9 272 Pfam PF00072 Response regulator receiver domain 53 160 1.3E-22 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_0913 7aecbd6ca608eb3c46fd8375fa1cede9 272 SMART SM00448 51 163 3.8E-35 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_0913 7aecbd6ca608eb3c46fd8375fa1cede9 272 SUPERFAMILY SSF46894 179 270 5.1E-19 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHALO_0913 7aecbd6ca608eb3c46fd8375fa1cede9 272 Pfam PF00486 Transcriptional regulatory protein, C terminal 194 269 1.3E-18 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_2488 f289ed175834b3a82039c00cb273e489 223 Gene3D G3DSA:3.10.620.30 2 204 2.9E-10 T 18-10-2018 SHALO_2488 f289ed175834b3a82039c00cb273e489 223 SUPERFAMILY SSF54001 35 166 1.01E-12 T 18-10-2018 IPR038765 Papain-like cysteine peptidase superfamily SHALO_2488 f289ed175834b3a82039c00cb273e489 223 Pfam PF01841 Transglutaminase-like superfamily 64 147 7.8E-7 T 18-10-2018 IPR002931 Transglutaminase-like SHALO_2169 749c3dacf517860b6f696425ef7de6ee 406 Pfam PF02687 FtsX-like permease family 312 399 4.4E-14 T 18-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 SHALO_2169 749c3dacf517860b6f696425ef7de6ee 406 Pfam PF12704 MacB-like periplasmic core domain 20 244 2.2E-38 T 18-10-2018 IPR025857 MacB-like periplasmic core domain SHALO_2075 d8ac1173629bf229bacd5bf34018f117 296 Pfam PF00892 EamA-like transporter family 7 144 1.2E-16 T 18-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 SHALO_2075 d8ac1173629bf229bacd5bf34018f117 296 Pfam PF00892 EamA-like transporter family 157 287 4.4E-14 T 18-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 SHALO_2075 d8ac1173629bf229bacd5bf34018f117 296 SUPERFAMILY SSF103481 191 289 3.4E-5 T 18-10-2018 SHALO_2075 d8ac1173629bf229bacd5bf34018f117 296 SUPERFAMILY SSF103481 47 146 1.7E-10 T 18-10-2018 SHALO_2708 e39d87ddbaaca3550a797b23dd6a55f4 202 Gene3D G3DSA:3.40.50.880 1 202 2.1E-63 T 18-10-2018 IPR029062 Class I glutamine amidotransferase-like SHALO_2708 e39d87ddbaaca3550a797b23dd6a55f4 202 SUPERFAMILY SSF52317 4 198 1.42E-50 T 18-10-2018 IPR029062 Class I glutamine amidotransferase-like SHALO_2708 e39d87ddbaaca3550a797b23dd6a55f4 202 Pfam PF01965 DJ-1/PfpI family 4 179 1.3E-23 T 18-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 SHALO_1638 4c0996f2268d7477bbdadc1a77aba734 216 Gene3D G3DSA:3.40.50.2300 1 120 4.3E-31 T 18-10-2018 SHALO_1638 4c0996f2268d7477bbdadc1a77aba734 216 Gene3D G3DSA:1.10.10.10 128 216 4.7E-16 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_1638 4c0996f2268d7477bbdadc1a77aba734 216 SMART SM00448 1 111 1.3E-29 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_1638 4c0996f2268d7477bbdadc1a77aba734 216 SUPERFAMILY SSF52172 1 117 1.71E-28 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_1638 4c0996f2268d7477bbdadc1a77aba734 216 Pfam PF00072 Response regulator receiver domain 4 111 1.3E-24 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_1638 4c0996f2268d7477bbdadc1a77aba734 216 SUPERFAMILY SSF46894 137 212 3.97E-14 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHALO_1638 4c0996f2268d7477bbdadc1a77aba734 216 Pfam PF00486 Transcriptional regulatory protein, C terminal 142 212 6.4E-13 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_1638 4c0996f2268d7477bbdadc1a77aba734 216 SMART SM00862 142 212 1.2E-11 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_2254 85bfc5d70ceb118a018580b619a46039 298 SUPERFAMILY SSF103481 42 139 2.22E-12 T 18-10-2018 SHALO_2254 85bfc5d70ceb118a018580b619a46039 298 SUPERFAMILY SSF103481 188 288 9.81E-16 T 18-10-2018 SHALO_2254 85bfc5d70ceb118a018580b619a46039 298 Pfam PF00892 EamA-like transporter family 4 136 6.0E-23 T 18-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 SHALO_2254 85bfc5d70ceb118a018580b619a46039 298 Pfam PF00892 EamA-like transporter family 151 286 1.7E-23 T 18-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 SHALO_1296 7b47da0dd2578d2d9850058c4ec01548 140 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 49 60 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_1296 7b47da0dd2578d2d9850058c4ec01548 140 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 15 26 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_1296 7b47da0dd2578d2d9850058c4ec01548 140 Pfam PF13187 4Fe-4S dicluster domain 14 64 2.6E-8 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_1296 7b47da0dd2578d2d9850058c4ec01548 140 Gene3D G3DSA:3.30.70.20 2 33 7.3E-6 T 18-10-2018 SHALO_1296 7b47da0dd2578d2d9850058c4ec01548 140 SUPERFAMILY SSF54862 4 68 6.7E-16 T 18-10-2018 SHALO_1296 7b47da0dd2578d2d9850058c4ec01548 140 Gene3D G3DSA:3.30.70.20 34 90 1.1E-6 T 18-10-2018 SHALO_2826 f80982e6758c095ea0b0ce5435bb69a8 388 Gene3D G3DSA:3.30.460.10 3 153 2.2E-27 T 18-10-2018 SHALO_2826 f80982e6758c095ea0b0ce5435bb69a8 388 SUPERFAMILY SSF81301 6 203 1.29E-36 T 18-10-2018 SHALO_2826 f80982e6758c095ea0b0ce5435bb69a8 388 Pfam PF04607 Region found in RelA / SpoT proteins 47 169 5.2E-25 T 18-10-2018 IPR007685 RelA/SpoT GO:0015969 SHALO_2826 f80982e6758c095ea0b0ce5435bb69a8 388 SMART SM00954 46 172 4.9E-23 T 18-10-2018 IPR007685 RelA/SpoT GO:0015969 SHALO_2826 f80982e6758c095ea0b0ce5435bb69a8 388 Gene3D G3DSA:1.10.287.860 155 206 2.5E-8 T 18-10-2018 SHALO_0994 a9831559168b98a525883a3d4f87592f 448 Gene3D G3DSA:1.25.40.880 310 447 2.7E-43 T 18-10-2018 IPR038536 Alkyl/aryl-sulfatase, dimerisation domain superfamily SHALO_0994 a9831559168b98a525883a3d4f87592f 448 SUPERFAMILY SSF56281 5 445 5.32E-99 T 18-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like SHALO_0994 a9831559168b98a525883a3d4f87592f 448 Pfam PF14863 Alkyl sulfatase dimerisation 311 445 3.7E-43 T 18-10-2018 IPR029228 Alkyl sulfatase dimerisation domain GO:0046983 SHALO_0994 a9831559168b98a525883a3d4f87592f 448 Pfam PF00753 Metallo-beta-lactamase superfamily 61 273 8.2E-26 T 18-10-2018 IPR001279 Metallo-beta-lactamase SHALO_0994 a9831559168b98a525883a3d4f87592f 448 Gene3D G3DSA:3.60.15.30 8 308 1.2E-71 T 18-10-2018 SHALO_0994 a9831559168b98a525883a3d4f87592f 448 SMART SM00849 60 273 1.8E-19 T 18-10-2018 IPR001279 Metallo-beta-lactamase SHALO_2677 69c2901b5eeb26c8d75e71b0cb288b9e 103 Pfam PF02641 Uncharacterized ACR, COG1993 14 86 2.1E-8 T 18-10-2018 IPR003793 Domain of unknown function DUF190 SHALO_2677 69c2901b5eeb26c8d75e71b0cb288b9e 103 Gene3D G3DSA:3.30.70.120 2 99 4.2E-11 T 18-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal SHALO_2677 69c2901b5eeb26c8d75e71b0cb288b9e 103 SUPERFAMILY SSF54913 1 101 1.67E-17 T 18-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta SHALO_0984 9d9707c73fbd6067c2909a710fd7374c 533 SUPERFAMILY SSF58104 223 532 9.55E-51 T 18-10-2018 SHALO_0984 9d9707c73fbd6067c2909a710fd7374c 533 SMART SM00283 270 531 2.1E-38 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_0984 9d9707c73fbd6067c2909a710fd7374c 533 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 349 476 1.1E-33 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_0984 9d9707c73fbd6067c2909a710fd7374c 533 Gene3D G3DSA:1.10.287.950 202 533 5.3E-55 T 18-10-2018 SHALO_1294 5c2d60bb79034d6c0ef823b044a3254c 362 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 126 284 1.8E-45 T 18-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_1294 5c2d60bb79034d6c0ef823b044a3254c 362 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 289 362 6.9E-17 T 18-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_1294 5c2d60bb79034d6c0ef823b044a3254c 362 Gene3D G3DSA:1.10.645.20 5 362 7.1E-112 T 18-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_1294 5c2d60bb79034d6c0ef823b044a3254c 362 SUPERFAMILY SSF56762 26 362 4.58E-103 T 18-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_1294 5c2d60bb79034d6c0ef823b044a3254c 362 Pfam PF00374 Nickel-dependent hydrogenase 44 113 2.3E-7 T 18-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 SHALO_0030 5e870e97ca441c609dc32ecb397db6c0 230 SMART SM00862 154 224 8.8E-7 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_0030 5e870e97ca441c609dc32ecb397db6c0 230 Gene3D G3DSA:3.40.50.2300 10 135 1.4E-29 T 18-10-2018 SHALO_0030 5e870e97ca441c609dc32ecb397db6c0 230 SUPERFAMILY SSF52172 12 187 2.99E-33 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_0030 5e870e97ca441c609dc32ecb397db6c0 230 Pfam PF00072 Response regulator receiver domain 14 123 1.1E-23 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_0030 5e870e97ca441c609dc32ecb397db6c0 230 Gene3D G3DSA:1.10.10.10 136 226 1.4E-10 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_0030 5e870e97ca441c609dc32ecb397db6c0 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 224 6.9E-8 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_0030 5e870e97ca441c609dc32ecb397db6c0 230 SMART SM00448 12 123 4.1E-26 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_1575 fdf4ef0324e5c656e8538aafff603ffb 454 Pfam PF01474 Class-II DAHP synthetase family 4 441 5.1E-206 T 18-10-2018 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 SHALO_1575 fdf4ef0324e5c656e8538aafff603ffb 454 Gene3D G3DSA:3.20.20.70 190 446 9.5E-102 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_1575 fdf4ef0324e5c656e8538aafff603ffb 454 SUPERFAMILY SSF51569 3 445 8.79E-201 T 18-10-2018 SHALO_1575 fdf4ef0324e5c656e8538aafff603ffb 454 TIGRFAM TIGR01358 DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase 4 447 3.5E-215 T 18-10-2018 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 SHALO_0558 40b4fc64c6badf7564df85db915e998d 214 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_0558 40b4fc64c6badf7564df85db915e998d 214 SUPERFAMILY SSF52540 3 205 3.45E-49 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0558 40b4fc64c6badf7564df85db915e998d 214 Pfam PF00005 ABC transporter 19 160 2.8E-30 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_0558 40b4fc64c6badf7564df85db915e998d 214 SMART SM00382 27 211 5.5E-10 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_0558 40b4fc64c6badf7564df85db915e998d 214 Gene3D G3DSA:3.40.50.300 3 213 1.3E-47 T 18-10-2018 SHALO_0176 50ed8c9eb5b9a5df93e613d44bcec246 123 SUPERFAMILY SSF46785 4 119 2.11E-22 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SHALO_0176 50ed8c9eb5b9a5df93e613d44bcec246 123 Pfam PF01475 Ferric uptake regulator family 13 99 8.4E-16 T 18-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 SHALO_0176 50ed8c9eb5b9a5df93e613d44bcec246 123 Gene3D G3DSA:1.10.10.10 1 81 1.4E-11 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_1893 6acebe8090bc8326c2ef88b193daa99a 216 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 43 50 - T 18-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 SHALO_1893 6acebe8090bc8326c2ef88b193daa99a 216 SMART SM00947 31 202 1.7E-56 T 18-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 SHALO_1893 6acebe8090bc8326c2ef88b193daa99a 216 Gene3D G3DSA:3.40.1050.10 1 211 2.4E-62 T 18-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 SHALO_1893 6acebe8090bc8326c2ef88b193daa99a 216 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 88 108 - T 18-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 SHALO_1893 6acebe8090bc8326c2ef88b193daa99a 216 Pfam PF00484 Carbonic anhydrase 39 198 3.1E-44 T 18-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 SHALO_1893 6acebe8090bc8326c2ef88b193daa99a 216 SUPERFAMILY SSF53056 4 211 2.49E-55 T 18-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 SHALO_2375 f5585d60917d1ab7b15465aa9dee7a95 122 Gene3D G3DSA:1.10.260.40 53 117 1.3E-5 T 18-10-2018 SHALO_2375 f5585d60917d1ab7b15465aa9dee7a95 122 SUPERFAMILY SSF47413 60 117 2.82E-6 T 18-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 SHALO_2375 f5585d60917d1ab7b15465aa9dee7a95 122 SMART SM00530 62 116 1.0E-4 T 18-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SHALO_0699 3ba81b1316675f548142ad82c58ec194 292 Pfam PF01039 Carboxyl transferase domain 58 238 2.2E-20 T 18-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 SHALO_0699 3ba81b1316675f548142ad82c58ec194 292 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 4 279 38.466 T 18-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 SHALO_0699 3ba81b1316675f548142ad82c58ec194 292 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 161 179 7.1E-38 T 18-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 SHALO_0699 3ba81b1316675f548142ad82c58ec194 292 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 198 215 7.1E-38 T 18-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 SHALO_0699 3ba81b1316675f548142ad82c58ec194 292 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 227 238 7.1E-38 T 18-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 SHALO_0699 3ba81b1316675f548142ad82c58ec194 292 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 127 141 7.1E-38 T 18-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 SHALO_0699 3ba81b1316675f548142ad82c58ec194 292 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 249 258 7.1E-38 T 18-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 SHALO_0699 3ba81b1316675f548142ad82c58ec194 292 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 2 277 3.5E-130 T 18-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 SHALO_0699 3ba81b1316675f548142ad82c58ec194 292 Gene3D G3DSA:3.90.226.10 23 283 1.6E-86 T 18-10-2018 SHALO_0699 3ba81b1316675f548142ad82c58ec194 292 SUPERFAMILY SSF52096 24 277 2.81E-82 T 18-10-2018 IPR029045 ClpP/crotonase-like domain superfamily SHALO_2193 b40e8d8c49256ae197e0206f5ea8ccd9 266 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 2 264 5.1E-113 T 18-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 SHALO_2193 b40e8d8c49256ae197e0206f5ea8ccd9 266 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 1 266 47.049 T 18-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 SHALO_2193 b40e8d8c49256ae197e0206f5ea8ccd9 266 Gene3D G3DSA:3.20.20.70 1 266 4.5E-94 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_2193 b40e8d8c49256ae197e0206f5ea8ccd9 266 SUPERFAMILY SSF51569 2 265 5.86E-89 T 18-10-2018 SHALO_2193 b40e8d8c49256ae197e0206f5ea8ccd9 266 Pfam PF00793 DAHP synthetase I family 2 252 2.4E-58 T 18-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 SHALO_2152 edd2921cb55efc8091bb3f54edba83e0 387 SUPERFAMILY SSF69765 226 384 2.35E-55 T 18-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 SHALO_2152 edd2921cb55efc8091bb3f54edba83e0 387 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 226 381 30.42 T 18-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 SHALO_2152 edd2921cb55efc8091bb3f54edba83e0 387 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 228 379 3.4E-52 T 18-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 SHALO_2152 edd2921cb55efc8091bb3f54edba83e0 387 Gene3D G3DSA:3.90.550.10 16 220 1.5E-51 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_2152 edd2921cb55efc8091bb3f54edba83e0 387 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 19 214 4.1E-34 T 18-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 SHALO_2152 edd2921cb55efc8091bb3f54edba83e0 387 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 19 215 8.8E-56 T 18-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 SHALO_2152 edd2921cb55efc8091bb3f54edba83e0 387 SUPERFAMILY SSF53448 17 215 2.18E-45 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_2152 edd2921cb55efc8091bb3f54edba83e0 387 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 260 275 - T 18-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 SHALO_2152 edd2921cb55efc8091bb3f54edba83e0 387 Pfam PF02542 YgbB family 227 379 9.0E-54 T 18-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 SHALO_2152 edd2921cb55efc8091bb3f54edba83e0 387 Hamap MF_01520 Bifunctional enzyme IspD/IspF [ispDF]. 15 382 34.903 T 18-10-2018 IPR026596 Bifunctional enzyme IspD/IspF KEGG: 00900+4.6.1.12+2.7.7.60|MetaCyc: PWY-7560 SHALO_2152 edd2921cb55efc8091bb3f54edba83e0 387 Gene3D G3DSA:3.30.1330.50 225 387 8.8E-60 T 18-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 SHALO_0358 cc1675d9aa6cf2f5671e4a8d868ae1f3 548 Gene3D G3DSA:3.30.565.10 396 544 5.6E-23 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_0358 cc1675d9aa6cf2f5671e4a8d868ae1f3 548 SUPERFAMILY SSF47384 324 391 5.89E-6 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SHALO_0358 cc1675d9aa6cf2f5671e4a8d868ae1f3 548 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 435 542 4.3E-9 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_0358 cc1675d9aa6cf2f5671e4a8d868ae1f3 548 Pfam PF13426 PAS domain 210 313 1.7E-9 T 18-10-2018 IPR000014 PAS domain SHALO_0358 cc1675d9aa6cf2f5671e4a8d868ae1f3 548 SUPERFAMILY SSF55785 189 298 3.66E-12 T 18-10-2018 IPR035965 PAS domain superfamily SHALO_0358 cc1675d9aa6cf2f5671e4a8d868ae1f3 548 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 202 315 1.2E-13 T 18-10-2018 IPR000014 PAS domain SHALO_0358 cc1675d9aa6cf2f5671e4a8d868ae1f3 548 SUPERFAMILY SSF55874 392 543 3.01E-20 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_0358 cc1675d9aa6cf2f5671e4a8d868ae1f3 548 PRINTS PR00344 Bacterial sensor protein C-terminal signature 493 503 9.7E-6 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_0358 cc1675d9aa6cf2f5671e4a8d868ae1f3 548 PRINTS PR00344 Bacterial sensor protein C-terminal signature 475 489 9.7E-6 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_0358 cc1675d9aa6cf2f5671e4a8d868ae1f3 548 PRINTS PR00344 Bacterial sensor protein C-terminal signature 529 542 9.7E-6 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_0358 cc1675d9aa6cf2f5671e4a8d868ae1f3 548 PRINTS PR00344 Bacterial sensor protein C-terminal signature 505 523 9.7E-6 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_0358 cc1675d9aa6cf2f5671e4a8d868ae1f3 548 SMART SM00387 434 545 7.8E-7 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_0358 cc1675d9aa6cf2f5671e4a8d868ae1f3 548 SMART SM00091 199 265 5.1E-6 T 18-10-2018 IPR000014 PAS domain SHALO_0358 cc1675d9aa6cf2f5671e4a8d868ae1f3 548 Gene3D G3DSA:3.30.450.20 196 316 4.3E-18 T 18-10-2018 SHALO_0358 cc1675d9aa6cf2f5671e4a8d868ae1f3 548 Gene3D G3DSA:1.10.287.130 319 393 1.5E-10 T 18-10-2018 SHALO_0105 b6b2fc736bce417d9b30c56e0b284db7 281 SMART SM00650 18 189 1.5E-55 T 18-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 SHALO_0105 b6b2fc736bce417d9b30c56e0b284db7 281 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 33 59 - T 18-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 SHALO_0105 b6b2fc736bce417d9b30c56e0b284db7 281 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 2 268 40.634 T 18-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 SHALO_0105 b6b2fc736bce417d9b30c56e0b284db7 281 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 3 262 3.9E-63 T 18-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 SHALO_0105 b6b2fc736bce417d9b30c56e0b284db7 281 Gene3D G3DSA:3.40.50.150 1 191 9.4E-54 T 18-10-2018 SHALO_0105 b6b2fc736bce417d9b30c56e0b284db7 281 SUPERFAMILY SSF53335 4 267 1.6E-47 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_0105 b6b2fc736bce417d9b30c56e0b284db7 281 Pfam PF00398 Ribosomal RNA adenine dimethylase 4 242 6.7E-41 T 18-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm SHALO_0496 7e1cac343c3e68c987c3ec439063f9f0 530 Gene3D G3DSA:3.10.105.10 277 325 8.7E-39 T 18-10-2018 SHALO_0496 7e1cac343c3e68c987c3ec439063f9f0 530 SUPERFAMILY SSF53850 40 501 2.53E-46 T 18-10-2018 SHALO_0496 7e1cac343c3e68c987c3ec439063f9f0 530 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 91 324 8.0E-34 T 18-10-2018 IPR000914 Solute-binding protein family 5 domain SHALO_0496 7e1cac343c3e68c987c3ec439063f9f0 530 Gene3D G3DSA:3.40.190.10 54 276 8.7E-39 T 18-10-2018 SHALO_1715 f4508ced87b5b2b5dac58f4e9d65ec6a 267 Gene3D G3DSA:1.10.10.10 1 85 8.1E-22 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_1715 f4508ced87b5b2b5dac58f4e9d65ec6a 267 SUPERFAMILY SSF46785 5 82 1.82E-13 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SHALO_0166 46b24fd604ee59805306dbae93af756b 383 SUPERFAMILY SSF141371 256 316 9.02E-6 T 18-10-2018 SHALO_0166 46b24fd604ee59805306dbae93af756b 383 Gene3D G3DSA:2.40.10.220 254 380 5.1E-5 T 18-10-2018 SHALO_0166 46b24fd604ee59805306dbae93af756b 383 Pfam PF07238 PilZ domain 256 363 2.2E-5 T 18-10-2018 IPR009875 PilZ domain GO:0035438 SHALO_0224 74e101b41a0aa248210cd4f6686fcb20 364 PRINTS PR00679 Prohibitin signature 145 164 1.7E-14 T 18-10-2018 IPR000163 Prohibitin GO:0016020 Reactome: R-HSA-8949664 SHALO_0224 74e101b41a0aa248210cd4f6686fcb20 364 PRINTS PR00679 Prohibitin signature 191 207 1.7E-14 T 18-10-2018 IPR000163 Prohibitin GO:0016020 Reactome: R-HSA-8949664 SHALO_0224 74e101b41a0aa248210cd4f6686fcb20 364 PRINTS PR00679 Prohibitin signature 168 186 1.7E-14 T 18-10-2018 IPR000163 Prohibitin GO:0016020 Reactome: R-HSA-8949664 SHALO_0224 74e101b41a0aa248210cd4f6686fcb20 364 PRINTS PR00679 Prohibitin signature 242 265 1.7E-14 T 18-10-2018 IPR000163 Prohibitin GO:0016020 Reactome: R-HSA-8949664 SHALO_0224 74e101b41a0aa248210cd4f6686fcb20 364 PRINTS PR00679 Prohibitin signature 265 281 1.7E-14 T 18-10-2018 IPR000163 Prohibitin GO:0016020 Reactome: R-HSA-8949664 SHALO_0224 74e101b41a0aa248210cd4f6686fcb20 364 SMART SM00244 63 247 3.5E-25 T 18-10-2018 IPR001107 Band 7 domain SHALO_0224 74e101b41a0aa248210cd4f6686fcb20 364 SUPERFAMILY SSF117892 95 252 2.62E-13 T 18-10-2018 IPR036013 Band 7/SPFH domain superfamily SHALO_0224 74e101b41a0aa248210cd4f6686fcb20 364 Pfam PF01145 SPFH domain / Band 7 family 67 267 1.8E-28 T 18-10-2018 IPR001107 Band 7 domain SHALO_2447 d801515579e324225d47eb3c56d5a3e6 161 Pfam PF00578 AhpC/TSA family 28 142 1.3E-18 T 18-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 SHALO_2447 d801515579e324225d47eb3c56d5a3e6 161 Gene3D G3DSA:3.40.30.10 17 160 2.6E-32 T 18-10-2018 SHALO_2447 d801515579e324225d47eb3c56d5a3e6 161 SUPERFAMILY SSF52833 26 157 1.72E-29 T 18-10-2018 IPR036249 Thioredoxin-like superfamily SHALO_1103 198a8cfb51c22d95bebda9567d99f4e4 280 Gene3D G3DSA:3.40.50.10860 6 274 3.1E-112 T 18-10-2018 SHALO_1103 198a8cfb51c22d95bebda9567d99f4e4 280 SUPERFAMILY SSF53223 1 119 1.92E-37 T 18-10-2018 SHALO_1103 198a8cfb51c22d95bebda9567d99f4e4 280 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 3 118 1.0E-38 T 18-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 SHALO_1103 198a8cfb51c22d95bebda9567d99f4e4 280 SUPERFAMILY SSF51735 120 276 4.57E-51 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_1103 198a8cfb51c22d95bebda9567d99f4e4 280 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 107 128 1.2E-82 T 18-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 SHALO_1103 198a8cfb51c22d95bebda9567d99f4e4 280 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 201 230 1.2E-82 T 18-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 SHALO_1103 198a8cfb51c22d95bebda9567d99f4e4 280 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 152 172 1.2E-82 T 18-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 SHALO_1103 198a8cfb51c22d95bebda9567d99f4e4 280 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 72 99 1.2E-82 T 18-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 SHALO_1103 198a8cfb51c22d95bebda9567d99f4e4 280 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 236 252 1.2E-82 T 18-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 SHALO_1103 198a8cfb51c22d95bebda9567d99f4e4 280 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 253 271 1.2E-82 T 18-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 SHALO_1103 198a8cfb51c22d95bebda9567d99f4e4 280 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 31 53 1.2E-82 T 18-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 SHALO_1103 198a8cfb51c22d95bebda9567d99f4e4 280 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 73 98 - T 18-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 SHALO_1103 198a8cfb51c22d95bebda9567d99f4e4 280 Hamap MF_01576 Bifunctional protein FolD [folD]. 1 280 38.242 T 18-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 SHALO_1103 198a8cfb51c22d95bebda9567d99f4e4 280 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 121 278 1.6E-69 T 18-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 SHALO_1103 198a8cfb51c22d95bebda9567d99f4e4 280 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 257 265 - T 18-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 SHALO_1103 198a8cfb51c22d95bebda9567d99f4e4 280 Gene3D G3DSA:3.40.50.720 4 256 3.1E-112 T 18-10-2018 SHALO_0486 642b9e97b7e5d4bf9ee58f470d5f76b7 273 Gene3D G3DSA:3.40.190.10 42 267 5.5E-100 T 18-10-2018 SHALO_0486 642b9e97b7e5d4bf9ee58f470d5f76b7 273 PIRSF PIRSF002854 1 273 2.8E-107 T 18-10-2018 IPR004872 Lipoprotein NlpA family SHALO_0486 642b9e97b7e5d4bf9ee58f470d5f76b7 273 Pfam PF03180 NLPA lipoprotein 40 273 3.4E-95 T 18-10-2018 IPR004872 Lipoprotein NlpA family SHALO_0486 642b9e97b7e5d4bf9ee58f470d5f76b7 273 Gene3D G3DSA:3.40.190.10 120 223 5.5E-100 T 18-10-2018 SHALO_0486 642b9e97b7e5d4bf9ee58f470d5f76b7 273 SUPERFAMILY SSF53850 39 273 8.21E-84 T 18-10-2018 SHALO_0486 642b9e97b7e5d4bf9ee58f470d5f76b7 273 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 14 271 2.3E-71 T 18-10-2018 IPR004872 Lipoprotein NlpA family SHALO_1888 faa97105ef3d2cd94eebb328e2ae10c9 581 SMART SM00926 1 50 0.0021 T 18-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_1888 faa97105ef3d2cd94eebb328e2ae10c9 581 Gene3D G3DSA:3.40.228.10 113 472 3.7E-62 T 18-10-2018 SHALO_1888 faa97105ef3d2cd94eebb328e2ae10c9 581 SUPERFAMILY SSF53706 4 475 3.66E-69 T 18-10-2018 SHALO_1888 faa97105ef3d2cd94eebb328e2ae10c9 581 SUPERFAMILY SSF50692 480 580 9.95E-11 T 18-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily SHALO_1888 faa97105ef3d2cd94eebb328e2ae10c9 581 Gene3D G3DSA:3.30.2070.10 380 452 3.7E-62 T 18-10-2018 SHALO_1888 faa97105ef3d2cd94eebb328e2ae10c9 581 Gene3D G3DSA:2.40.40.20 510 581 1.3E-6 T 18-10-2018 SHALO_1888 faa97105ef3d2cd94eebb328e2ae10c9 581 Pfam PF00384 Molybdopterin oxidoreductase 119 404 2.0E-19 T 18-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_1888 faa97105ef3d2cd94eebb328e2ae10c9 581 Gene3D G3DSA:3.40.50.740 59 424 3.7E-62 T 18-10-2018 SHALO_2601 206ab335ee53485f7a263afed2032ca7 705 Pfam PF07715 TonB-dependent Receptor Plug Domain 72 170 1.0E-8 T 18-10-2018 IPR012910 TonB-dependent receptor, plug domain SHALO_2601 206ab335ee53485f7a263afed2032ca7 705 SUPERFAMILY SSF56935 32 705 3.8E-88 T 18-10-2018 SHALO_2601 206ab335ee53485f7a263afed2032ca7 705 Pfam PF00593 TonB dependent receptor 249 704 7.1E-31 T 18-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel SHALO_2601 206ab335ee53485f7a263afed2032ca7 705 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 688 705 - T 18-10-2018 IPR010917 TonB-dependent receptor, conserved site SHALO_2601 206ab335ee53485f7a263afed2032ca7 705 Gene3D G3DSA:2.40.170.20 182 705 5.3E-70 T 18-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily SHALO_2601 206ab335ee53485f7a263afed2032ca7 705 Gene3D G3DSA:2.170.130.10 51 181 1.4E-14 T 18-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily SHALO_1583 e165edd2d1410ce7b502a525ef9753af 232 Pfam PF05175 Methyltransferase small domain 19 112 1.1E-17 T 18-10-2018 IPR007848 Methyltransferase small domain GO:0008168 SHALO_1583 e165edd2d1410ce7b502a525ef9753af 232 SUPERFAMILY SSF53335 3 176 9.5E-22 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_1583 e165edd2d1410ce7b502a525ef9753af 232 Gene3D G3DSA:3.40.50.150 1 227 1.8E-48 T 18-10-2018 SHALO_1583 e165edd2d1410ce7b502a525ef9753af 232 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 99 105 - T 18-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SHALO_2276 dfd6fa499b7673cabb470ba5584b1528 76 Pfam PF00550 Phosphopantetheine attachment site 6 71 2.7E-15 T 18-10-2018 IPR009081 Phosphopantetheine binding ACP domain SHALO_2276 dfd6fa499b7673cabb470ba5584b1528 76 Gene3D G3DSA:1.10.1200.10 1 76 1.7E-28 T 18-10-2018 IPR036736 ACP-like superfamily SHALO_2276 dfd6fa499b7673cabb470ba5584b1528 76 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 2 75 1.3E-33 T 18-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 SHALO_2276 dfd6fa499b7673cabb470ba5584b1528 76 ProSitePatterns PS00012 Phosphopantetheine attachment site. 31 46 - T 18-10-2018 IPR006162 Phosphopantetheine attachment site SHALO_2276 dfd6fa499b7673cabb470ba5584b1528 76 SMART SM00823 Phosphopantetheine attachment site 4 62 0.0074 T 18-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 SHALO_2276 dfd6fa499b7673cabb470ba5584b1528 76 SUPERFAMILY SSF47336 3 75 1.31E-22 T 18-10-2018 IPR036736 ACP-like superfamily SHALO_2276 dfd6fa499b7673cabb470ba5584b1528 76 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 33 73 2.0E-9 T 18-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 SHALO_2276 dfd6fa499b7673cabb470ba5584b1528 76 Hamap MF_01217 Acyl carrier protein [acpP]. 2 76 21.916 T 18-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 SHALO_2678 acc1294a0c4a76e67b5ac01504e5361c 270 Pfam PF02311 AraC-like ligand binding domain 24 87 4.5E-8 T 18-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 SHALO_2678 acc1294a0c4a76e67b5ac01504e5361c 270 SUPERFAMILY SSF46689 216 263 9.41E-12 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SHALO_2678 acc1294a0c4a76e67b5ac01504e5361c 270 SMART SM00342 180 261 1.0E-12 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_2678 acc1294a0c4a76e67b5ac01504e5361c 270 Gene3D G3DSA:1.10.10.60 157 269 2.2E-23 T 18-10-2018 SHALO_2678 acc1294a0c4a76e67b5ac01504e5361c 270 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 245 261 7.4E-6 T 18-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SHALO_2678 acc1294a0c4a76e67b5ac01504e5361c 270 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 230 245 7.4E-6 T 18-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SHALO_2678 acc1294a0c4a76e67b5ac01504e5361c 270 SUPERFAMILY SSF51215 24 148 6.54E-15 T 18-10-2018 IPR037923 Transcription regulator HTH-like SHALO_2678 acc1294a0c4a76e67b5ac01504e5361c 270 Pfam PF12833 Helix-turn-helix domain 184 262 1.7E-17 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_2678 acc1294a0c4a76e67b5ac01504e5361c 270 Gene3D G3DSA:2.60.120.10 9 90 1.3E-12 T 18-10-2018 IPR014710 RmlC-like jelly roll fold SHALO_0997 66869571178ae669740f0da979c6c8ea 236 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 236 26.009 T 18-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_0997 66869571178ae669740f0da979c6c8ea 236 Gene3D G3DSA:1.10.10.200 21 77 3.5E-24 T 18-10-2018 IPR017856 Integrase-like, N-terminal SHALO_0997 66869571178ae669740f0da979c6c8ea 236 Gene3D G3DSA:3.30.70.980 82 234 2.9E-47 T 18-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_0997 66869571178ae669740f0da979c6c8ea 236 Pfam PF01709 Transcriptional regulator 5 235 8.6E-75 T 18-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_0997 66869571178ae669740f0da979c6c8ea 236 SUPERFAMILY SSF75625 1 235 6.67E-74 T 18-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_0997 66869571178ae669740f0da979c6c8ea 236 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 2 235 2.0E-73 T 18-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_0997 66869571178ae669740f0da979c6c8ea 236 Gene3D G3DSA:3.30.70.980 131 201 2.9E-47 T 18-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_0737 c01ccb19dba084615167a090b424872d 189 Hamap MF_00017 Recombination protein RecR [recR]. 1 189 61.626 T 18-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 SHALO_0737 c01ccb19dba084615167a090b424872d 189 Pfam PF02132 RecR protein 41 79 6.6E-14 T 18-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger SHALO_0737 c01ccb19dba084615167a090b424872d 189 SUPERFAMILY SSF111304 4 188 3.4E-57 T 18-10-2018 IPR023627 Recombination protein RecR SHALO_0737 c01ccb19dba084615167a090b424872d 189 Gene3D G3DSA:3.40.1360.10 78 189 2.0E-23 T 18-10-2018 SHALO_0737 c01ccb19dba084615167a090b424872d 189 Pfam PF13662 Toprim domain 82 161 2.6E-5 T 18-10-2018 IPR006171 TOPRIM domain SHALO_0737 c01ccb19dba084615167a090b424872d 189 TIGRFAM TIGR00615 recR: recombination protein RecR 6 187 2.7E-57 T 18-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 SHALO_0737 c01ccb19dba084615167a090b424872d 189 ProSitePatterns PS01300 RecR protein signature. 58 79 - T 18-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 SHALO_0737 c01ccb19dba084615167a090b424872d 189 Gene3D G3DSA:1.10.8.420 2 53 7.9E-12 T 18-10-2018 SHALO_1094 5c4157b2853685ab4c6132699fe26b61 188 SUPERFAMILY SSF52738 3 185 5.36E-46 T 18-10-2018 IPR035909 Methylesterase CheB, C-terminal SHALO_1094 5c4157b2853685ab4c6132699fe26b61 188 Gene3D G3DSA:3.40.50.180 1 184 1.1E-45 T 18-10-2018 IPR035909 Methylesterase CheB, C-terminal SHALO_1094 5c4157b2853685ab4c6132699fe26b61 188 Pfam PF01339 CheB methylesterase 6 181 1.6E-46 T 18-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SHALO_2607 5a57c3dc1dcc67f3a7173bfaeaeccaa8 215 SMART SM00862 142 212 7.2E-8 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_2607 5a57c3dc1dcc67f3a7173bfaeaeccaa8 215 SUPERFAMILY SSF52172 1 119 7.83E-28 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_2607 5a57c3dc1dcc67f3a7173bfaeaeccaa8 215 Gene3D G3DSA:1.10.10.10 125 214 1.2E-13 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_2607 5a57c3dc1dcc67f3a7173bfaeaeccaa8 215 Pfam PF00072 Response regulator receiver domain 3 111 1.4E-22 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_2607 5a57c3dc1dcc67f3a7173bfaeaeccaa8 215 SMART SM00448 1 111 3.2E-29 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_2607 5a57c3dc1dcc67f3a7173bfaeaeccaa8 215 SUPERFAMILY SSF46894 128 212 5.1E-11 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHALO_2607 5a57c3dc1dcc67f3a7173bfaeaeccaa8 215 Gene3D G3DSA:3.40.50.2300 1 122 1.0E-29 T 18-10-2018 SHALO_2607 5a57c3dc1dcc67f3a7173bfaeaeccaa8 215 Pfam PF00486 Transcriptional regulatory protein, C terminal 143 212 6.6E-11 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_0433 96b9cefa646c81268bc3757655bd04f5 320 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 140 1.6E-31 T 18-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 SHALO_0433 96b9cefa646c81268bc3757655bd04f5 320 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 144 309 4.0E-22 T 18-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 SHALO_0433 96b9cefa646c81268bc3757655bd04f5 320 Gene3D G3DSA:3.90.110.10 144 317 4.4E-48 T 18-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 SHALO_0433 96b9cefa646c81268bc3757655bd04f5 320 PIRSF PIRSF000102 1 316 3.2E-88 T 18-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SHALO_0433 96b9cefa646c81268bc3757655bd04f5 320 SUPERFAMILY SSF56327 143 308 4.32E-44 T 18-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 SHALO_0433 96b9cefa646c81268bc3757655bd04f5 320 PRINTS PR00086 L-lactate dehydrogenase signature 115 135 1.5E-24 T 18-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SHALO_0433 96b9cefa646c81268bc3757655bd04f5 320 PRINTS PR00086 L-lactate dehydrogenase signature 139 157 1.5E-24 T 18-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SHALO_0433 96b9cefa646c81268bc3757655bd04f5 320 PRINTS PR00086 L-lactate dehydrogenase signature 169 182 1.5E-24 T 18-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SHALO_0433 96b9cefa646c81268bc3757655bd04f5 320 PRINTS PR00086 L-lactate dehydrogenase signature 2 26 1.5E-24 T 18-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SHALO_0433 96b9cefa646c81268bc3757655bd04f5 320 PRINTS PR00086 L-lactate dehydrogenase signature 27 51 1.5E-24 T 18-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SHALO_0433 96b9cefa646c81268bc3757655bd04f5 320 Gene3D G3DSA:3.40.50.720 1 143 9.0E-42 T 18-10-2018 SHALO_0433 96b9cefa646c81268bc3757655bd04f5 320 SUPERFAMILY SSF51735 2 143 2.34E-36 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_0084 67b4d130917d237c90222661d68282ba 559 Pfam PF00920 Dehydratase family 31 553 5.4E-217 T 18-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 SHALO_0084 67b4d130917d237c90222661d68282ba 559 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 464 475 - T 18-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 SHALO_0084 67b4d130917d237c90222661d68282ba 559 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 14 556 1.5E-229 T 18-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 SHALO_0084 67b4d130917d237c90222661d68282ba 559 Gene3D G3DSA:3.50.30.80 377 527 1.4E-51 T 18-10-2018 SHALO_0084 67b4d130917d237c90222661d68282ba 559 SUPERFAMILY SSF52016 377 556 1.18E-57 T 18-10-2018 SHALO_0084 67b4d130917d237c90222661d68282ba 559 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 119 129 - T 18-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 SHALO_0084 67b4d130917d237c90222661d68282ba 559 SUPERFAMILY SSF143975 1 376 2.09E-134 T 18-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 SHALO_0084 67b4d130917d237c90222661d68282ba 559 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 1 556 44.649 T 18-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 SHALO_1381 9e79f8e493a27e412e4b54ce9671a329 244 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 244 30.476 T 18-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHALO_1381 9e79f8e493a27e412e4b54ce9671a329 244 SUPERFAMILY SSF55120 1 244 5.9E-62 T 18-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHALO_1381 9e79f8e493a27e412e4b54ce9671a329 244 PIRSF PIRSF001430 1 244 7.7E-69 T 18-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHALO_1381 9e79f8e493a27e412e4b54ce9671a329 244 Pfam PF01416 tRNA pseudouridine synthase 145 244 2.4E-11 T 18-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHALO_1381 9e79f8e493a27e412e4b54ce9671a329 244 Pfam PF01416 tRNA pseudouridine synthase 8 107 1.3E-6 T 18-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHALO_1381 9e79f8e493a27e412e4b54ce9671a329 244 Gene3D G3DSA:3.30.70.580 1 108 1.6E-28 T 18-10-2018 SHALO_1381 9e79f8e493a27e412e4b54ce9671a329 244 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 2 239 4.8E-49 T 18-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHALO_1381 9e79f8e493a27e412e4b54ce9671a329 244 Gene3D G3DSA:3.30.70.660 109 242 1.6E-25 T 18-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 SHALO_1456 a9a2dd6ea1ed865ad391f9f0381d5db3 234 PRINTS PR01008 Flagellar L-ring protein signature 148 163 7.6E-16 T 18-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 SHALO_1456 a9a2dd6ea1ed865ad391f9f0381d5db3 234 PRINTS PR01008 Flagellar L-ring protein signature 211 225 7.6E-16 T 18-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 SHALO_1456 a9a2dd6ea1ed865ad391f9f0381d5db3 234 PRINTS PR01008 Flagellar L-ring protein signature 174 190 7.6E-16 T 18-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 SHALO_1456 a9a2dd6ea1ed865ad391f9f0381d5db3 234 PRINTS PR01008 Flagellar L-ring protein signature 195 209 7.6E-16 T 18-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 SHALO_1456 a9a2dd6ea1ed865ad391f9f0381d5db3 234 PRINTS PR01008 Flagellar L-ring protein signature 68 80 7.6E-16 T 18-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 SHALO_1456 a9a2dd6ea1ed865ad391f9f0381d5db3 234 Pfam PF02107 Flagellar L-ring protein 47 233 4.0E-52 T 18-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 SHALO_1456 a9a2dd6ea1ed865ad391f9f0381d5db3 234 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 232 24.635 T 18-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 SHALO_1439 f8f5926536df16731a8ac38a92b797d0 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 8.8E-32 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_1439 f8f5926536df16731a8ac38a92b797d0 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 8.8E-32 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_1439 f8f5926536df16731a8ac38a92b797d0 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 8.8E-32 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_1439 f8f5926536df16731a8ac38a92b797d0 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 8.8E-32 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_1439 f8f5926536df16731a8ac38a92b797d0 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 8.8E-32 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_1439 f8f5926536df16731a8ac38a92b797d0 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 8.8E-32 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_1439 f8f5926536df16731a8ac38a92b797d0 255 SUPERFAMILY SSF51735 2 253 1.1E-66 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_1439 f8f5926536df16731a8ac38a92b797d0 255 Gene3D G3DSA:3.40.50.720 1 255 1.7E-59 T 18-10-2018 SHALO_1439 f8f5926536df16731a8ac38a92b797d0 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 253 8.3E-60 T 18-10-2018 SHALO_2414 0540d3bc7ca442e40fe7125cb18e0cef 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 18-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_2414 0540d3bc7ca442e40fe7125cb18e0cef 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 2.7E-23 T 18-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_2414 0540d3bc7ca442e40fe7125cb18e0cef 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 37 1.0E-7 T 18-10-2018 SHALO_2414 0540d3bc7ca442e40fe7125cb18e0cef 37 Pfam PF00444 Ribosomal protein L36 1 37 8.0E-19 T 18-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_2414 0540d3bc7ca442e40fe7125cb18e0cef 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 17.291 T 18-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_2414 0540d3bc7ca442e40fe7125cb18e0cef 37 SUPERFAMILY SSF57840 1 37 1.7E-16 T 18-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_0369 ab0e3ed6214aceaa9013921af96583d4 76 Pfam PF01402 Ribbon-helix-helix protein, copG family 5 39 1.0E-6 T 18-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 SHALO_0369 ab0e3ed6214aceaa9013921af96583d4 76 SUPERFAMILY SSF47598 4 43 1.73E-6 T 18-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 SHALO_0091 ebe2b1438c34f57b705d37877377d24b 219 SUPERFAMILY SSF53335 28 217 6.29E-37 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_0091 ebe2b1438c34f57b705d37877377d24b 219 Gene3D G3DSA:3.40.50.150 2 218 3.0E-60 T 18-10-2018 SHALO_0091 ebe2b1438c34f57b705d37877377d24b 219 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 16 217 6.7E-54 T 18-10-2018 SHALO_0091 ebe2b1438c34f57b705d37877377d24b 219 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 140 155 - T 18-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 SHALO_0091 ebe2b1438c34f57b705d37877377d24b 219 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 14 218 2.2E-62 T 18-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 SHALO_1293 388dc95c3af6b49f11b04678dcbbc066 157 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 91 102 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_1293 388dc95c3af6b49f11b04678dcbbc066 157 Pfam PF13247 4Fe-4S dicluster domain 54 144 2.7E-11 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_1293 388dc95c3af6b49f11b04678dcbbc066 157 Gene3D G3DSA:3.30.70.20 6 151 2.7E-28 T 18-10-2018 SHALO_1293 388dc95c3af6b49f11b04678dcbbc066 157 Gene3D G3DSA:3.30.70.20 66 119 2.7E-28 T 18-10-2018 SHALO_1293 388dc95c3af6b49f11b04678dcbbc066 157 SUPERFAMILY SSF54862 1 149 1.88E-36 T 18-10-2018 SHALO_1669 80021b553ec86cf3fc947056ae761a83 232 Gene3D G3DSA:2.40.50.100 30 161 2.9E-28 T 18-10-2018 SHALO_1669 80021b553ec86cf3fc947056ae761a83 232 Gene3D G3DSA:1.10.287.470 64 125 2.9E-28 T 18-10-2018 SHALO_1669 80021b553ec86cf3fc947056ae761a83 232 SUPERFAMILY SSF111369 30 227 1.7E-14 T 18-10-2018 SHALO_1669 80021b553ec86cf3fc947056ae761a83 232 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 26 212 4.4E-16 T 18-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SHALO_1669 80021b553ec86cf3fc947056ae761a83 232 Gene3D G3DSA:2.40.30.170 26 217 2.9E-28 T 18-10-2018 SHALO_1708 68bcf5f76fef103c516094cf2e732af7 234 Gene3D G3DSA:3.90.550.10 1 233 1.1E-74 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_1708 68bcf5f76fef103c516094cf2e732af7 234 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 234 33.322 T 18-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 SHALO_1708 68bcf5f76fef103c516094cf2e732af7 234 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 227 7.5E-78 T 18-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 SHALO_1708 68bcf5f76fef103c516094cf2e732af7 234 SUPERFAMILY SSF53448 2 233 1.64E-52 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_1708 68bcf5f76fef103c516094cf2e732af7 234 Pfam PF02348 Cytidylyltransferase 1 208 1.3E-48 T 18-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 SHALO_2501 917ab76d4f7d3d8b18c65c9003b2a081 210 Pfam PF13189 Cytidylate kinase-like family 8 190 1.5E-52 T 18-10-2018 SHALO_2501 917ab76d4f7d3d8b18c65c9003b2a081 210 Gene3D G3DSA:3.40.50.300 3 207 5.3E-61 T 18-10-2018 SHALO_2501 917ab76d4f7d3d8b18c65c9003b2a081 210 SUPERFAMILY SSF52540 7 208 2.03E-8 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_2056 f4ef08bc7ef4fd8dd30bc83e1c3f34e1 217 SUPERFAMILY SSF54862 1 202 2.09E-65 T 18-10-2018 SHALO_2056 f4ef08bc7ef4fd8dd30bc83e1c3f34e1 217 Gene3D G3DSA:3.30.70.20 1 213 6.5E-51 T 18-10-2018 SHALO_2056 f4ef08bc7ef4fd8dd30bc83e1c3f34e1 217 Pfam PF13247 4Fe-4S dicluster domain 63 157 7.6E-23 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_2056 f4ef08bc7ef4fd8dd30bc83e1c3f34e1 217 TIGRFAM TIGR02951 DMSO_dmsB: dimethylsulfoxide reductase, chain B 7 167 3.3E-74 T 18-10-2018 IPR014297 Dimethylsulphoxide reductase, chain B SHALO_2056 f4ef08bc7ef4fd8dd30bc83e1c3f34e1 217 Pfam PF12800 4Fe-4S binding domain 13 27 0.03 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_2056 f4ef08bc7ef4fd8dd30bc83e1c3f34e1 217 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 103 114 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_0087 3b47f697d4a8d077ed8f8dfefd6fc843 556 Gene3D G3DSA:1.10.287.950 100 396 7.1E-59 T 18-10-2018 SHALO_0087 3b47f697d4a8d077ed8f8dfefd6fc843 556 SUPERFAMILY SSF58104 124 383 1.44E-56 T 18-10-2018 SHALO_0087 3b47f697d4a8d077ed8f8dfefd6fc843 556 SMART SM00283 125 386 5.0E-48 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_0087 3b47f697d4a8d077ed8f8dfefd6fc843 556 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 171 350 3.0E-43 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_0507 9cbe0a504b2f13ac0ba456e0fde3eb8c 493 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 6 483 6.6E-131 T 18-10-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0507 9cbe0a504b2f13ac0ba456e0fde3eb8c 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 162 186 5.1E-27 T 18-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0507 9cbe0a504b2f13ac0ba456e0fde3eb8c 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 132 151 5.1E-27 T 18-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0507 9cbe0a504b2f13ac0ba456e0fde3eb8c 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 238 262 5.1E-27 T 18-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0507 9cbe0a504b2f13ac0ba456e0fde3eb8c 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 326 345 5.1E-27 T 18-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0507 9cbe0a504b2f13ac0ba456e0fde3eb8c 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 378 404 5.1E-27 T 18-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0507 9cbe0a504b2f13ac0ba456e0fde3eb8c 493 Pfam PF00361 Proton-conducting membrane transporter 126 416 8.3E-54 T 18-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_1840 97114f91d94ce26d7e12b4a13a07c253 339 Pfam PF00512 His Kinase A (phospho-acceptor) domain 113 173 4.0E-14 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_1840 97114f91d94ce26d7e12b4a13a07c253 339 SMART SM00387 220 329 7.6E-23 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_1840 97114f91d94ce26d7e12b4a13a07c253 339 Pfam PF13493 Domain of unknown function (DUF4118) 9 107 6.8E-19 T 18-10-2018 IPR025201 Sensor protein KdpD, transmembrane domain SHALO_1840 97114f91d94ce26d7e12b4a13a07c253 339 Gene3D G3DSA:3.30.565.10 180 334 1.2E-28 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_1840 97114f91d94ce26d7e12b4a13a07c253 339 SMART SM00388 109 176 2.6E-14 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_1840 97114f91d94ce26d7e12b4a13a07c253 339 PRINTS PR00344 Bacterial sensor protein C-terminal signature 290 308 2.8E-7 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_1840 97114f91d94ce26d7e12b4a13a07c253 339 PRINTS PR00344 Bacterial sensor protein C-terminal signature 313 326 2.8E-7 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_1840 97114f91d94ce26d7e12b4a13a07c253 339 PRINTS PR00344 Bacterial sensor protein C-terminal signature 275 285 2.8E-7 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_1840 97114f91d94ce26d7e12b4a13a07c253 339 Gene3D G3DSA:1.20.120.620 4 104 5.4E-18 T 18-10-2018 IPR038318 KdpD, transmembrane domain superfamily SHALO_1840 97114f91d94ce26d7e12b4a13a07c253 339 SUPERFAMILY SSF55874 165 327 7.33E-32 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_1840 97114f91d94ce26d7e12b4a13a07c253 339 SUPERFAMILY SSF47384 95 175 1.2E-16 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SHALO_1840 97114f91d94ce26d7e12b4a13a07c253 339 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 220 327 4.1E-14 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_1840 97114f91d94ce26d7e12b4a13a07c253 339 Gene3D G3DSA:1.10.287.130 105 175 3.7E-16 T 18-10-2018 SHALO_0753 f07d76e3302f4f33bbf254688d1cd7bf 336 SUPERFAMILY SSF50998 87 297 1.73E-10 T 18-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily SHALO_0753 f07d76e3302f4f33bbf254688d1cd7bf 336 Gene3D G3DSA:2.130.10.10 56 261 2.2E-11 T 18-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 SHALO_0753 f07d76e3302f4f33bbf254688d1cd7bf 336 Pfam PF13360 PQQ-like domain 75 189 1.0E-7 T 18-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat SHALO_0508 63db493e68fa0d43e1fb1c7be0abd0ef 501 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 4 479 16.109 T 18-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 SHALO_0508 63db493e68fa0d43e1fb1c7be0abd0ef 501 Pfam PF00361 Proton-conducting membrane transporter 127 426 7.4E-62 T 18-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0508 63db493e68fa0d43e1fb1c7be0abd0ef 501 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 8 473 1.3E-102 T 18-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 SHALO_2157 f9c145cdd3fa2a4b5903bb056b56e3a7 188 SUPERFAMILY SSF101874 22 187 6.93E-48 T 18-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily SHALO_2157 f9c145cdd3fa2a4b5903bb056b56e3a7 188 Gene3D G3DSA:2.40.128.110 21 186 4.4E-46 T 18-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily SHALO_2157 f9c145cdd3fa2a4b5903bb056b56e3a7 188 SMART SM00867 22 186 1.3E-59 T 18-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SHALO_2157 f9c145cdd3fa2a4b5903bb056b56e3a7 188 Pfam PF04264 YceI-like domain 25 185 1.6E-40 T 18-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SHALO_0254 cc0e927a1bbb22c07c42ea276aa55edb 191 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 1 174 2.9E-52 T 18-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SHALO_0254 cc0e927a1bbb22c07c42ea276aa55edb 191 SUPERFAMILY SSF53178 1 176 1.05E-57 T 18-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 SHALO_0254 cc0e927a1bbb22c07c42ea276aa55edb 191 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 14 27 - T 18-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 SHALO_0254 cc0e927a1bbb22c07c42ea276aa55edb 191 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 1 173 33.315 T 18-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SHALO_0254 cc0e927a1bbb22c07c42ea276aa55edb 191 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 103 113 - T 18-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 SHALO_0254 cc0e927a1bbb22c07c42ea276aa55edb 191 Pfam PF01195 Peptidyl-tRNA hydrolase 3 175 3.2E-53 T 18-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SHALO_0254 cc0e927a1bbb22c07c42ea276aa55edb 191 Gene3D G3DSA:3.40.50.1470 1 183 9.8E-60 T 18-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 SHALO_0951 d9d91a6edb0630b82b3e9bce518ffac2 277 TIGRFAM TIGR02163 napH_: ferredoxin-type protein, NapH/MauN family 10 263 6.6E-96 T 18-10-2018 IPR011886 Ferredoxin-type protein, NapH/MauN family SHALO_0951 d9d91a6edb0630b82b3e9bce518ffac2 277 Pfam PF12801 4Fe-4S binding domain 71 109 1.8E-11 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_0951 d9d91a6edb0630b82b3e9bce518ffac2 277 Pfam PF12801 4Fe-4S binding domain 177 205 2.1E-4 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_0951 d9d91a6edb0630b82b3e9bce518ffac2 277 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 246 257 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_0951 d9d91a6edb0630b82b3e9bce518ffac2 277 Pfam PF13237 4Fe-4S dicluster domain 208 256 1.7E-7 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_0951 d9d91a6edb0630b82b3e9bce518ffac2 277 Gene3D G3DSA:3.30.70.20 234 273 4.1E-5 T 18-10-2018 SHALO_0951 d9d91a6edb0630b82b3e9bce518ffac2 277 Gene3D G3DSA:3.30.70.20 178 233 1.4E-5 T 18-10-2018 SHALO_0951 d9d91a6edb0630b82b3e9bce518ffac2 277 SUPERFAMILY SSF54862 81 264 3.72E-22 T 18-10-2018 SHALO_0561 769523b51106f2ef28e0275e6b52c9ed 198 Gene3D G3DSA:3.40.50.300 1 174 1.0E-59 T 18-10-2018 SHALO_0561 769523b51106f2ef28e0275e6b52c9ed 198 Hamap MF_00328 Guanylate kinase [gmk]. 1 179 31.762 T 18-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 SHALO_0561 769523b51106f2ef28e0275e6b52c9ed 198 Pfam PF00625 Guanylate kinase 1 172 2.5E-44 T 18-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit SHALO_0561 769523b51106f2ef28e0275e6b52c9ed 198 SUPERFAMILY SSF52540 1 182 2.96E-58 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0561 769523b51106f2ef28e0275e6b52c9ed 198 ProSitePatterns PS00856 Guanylate kinase-like signature. 31 48 - T 18-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 SHALO_0561 769523b51106f2ef28e0275e6b52c9ed 198 SMART SM00072 1 179 1.1E-54 T 18-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit SHALO_0561 769523b51106f2ef28e0275e6b52c9ed 198 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 1 176 2.4E-65 T 18-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 SHALO_0561 769523b51106f2ef28e0275e6b52c9ed 198 Gene3D G3DSA:3.30.63.10 28 87 1.0E-59 T 18-10-2018 SHALO_1285 51c5556d6fd62ec1bd2e207ea1139135 307 SMART SM00028 223 256 2.0 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_1285 51c5556d6fd62ec1bd2e207ea1139135 307 SMART SM00028 257 290 16.0 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_1285 51c5556d6fd62ec1bd2e207ea1139135 307 Gene3D G3DSA:1.25.40.10 179 296 3.7E-12 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SHALO_1285 51c5556d6fd62ec1bd2e207ea1139135 307 Pfam PF13181 Tetratricopeptide repeat 228 255 0.01 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_1285 51c5556d6fd62ec1bd2e207ea1139135 307 Gene3D G3DSA:3.90.70.10 43 178 1.0E-9 T 18-10-2018 SHALO_1285 51c5556d6fd62ec1bd2e207ea1139135 307 SUPERFAMILY SSF48452 206 304 3.96E-11 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SHALO_2448 73722d2ade207f9b2d259b16bae341e7 167 SUPERFAMILY SSF52833 4 160 9.14E-21 T 18-10-2018 IPR036249 Thioredoxin-like superfamily SHALO_2448 73722d2ade207f9b2d259b16bae341e7 167 Gene3D G3DSA:3.40.30.10 29 166 2.8E-17 T 18-10-2018 SHALO_2448 73722d2ade207f9b2d259b16bae341e7 167 Pfam PF00578 AhpC/TSA family 48 116 1.2E-8 T 18-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 SHALO_2255 8b05342bb5042c52c20fdef2605cc3da 389 SUPERFAMILY SSF109604 236 352 3.87E-12 T 18-10-2018 SHALO_2255 8b05342bb5042c52c20fdef2605cc3da 389 SUPERFAMILY SSF109604 20 177 8.38E-20 T 18-10-2018 SHALO_2255 8b05342bb5042c52c20fdef2605cc3da 389 Pfam PF01966 HD domain 234 349 7.8E-11 T 18-10-2018 IPR006674 HD domain SHALO_2255 8b05342bb5042c52c20fdef2605cc3da 389 Pfam PF01966 HD domain 28 139 5.8E-12 T 18-10-2018 IPR006674 HD domain SHALO_2255 8b05342bb5042c52c20fdef2605cc3da 389 SMART SM00471 236 364 4.4 T 18-10-2018 IPR003607 HD/PDEase domain SHALO_2255 8b05342bb5042c52c20fdef2605cc3da 389 SMART SM00471 21 149 0.0053 T 18-10-2018 IPR003607 HD/PDEase domain SHALO_2255 8b05342bb5042c52c20fdef2605cc3da 389 Gene3D G3DSA:1.10.3210.10 9 183 2.3E-24 T 18-10-2018 SHALO_2255 8b05342bb5042c52c20fdef2605cc3da 389 Gene3D G3DSA:1.10.3210.10 216 378 3.2E-23 T 18-10-2018 SHALO_0365 cc2c087650cbc9b121ccced65122ed27 458 SUPERFAMILY SSF56349 194 393 1.38E-13 T 18-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SHALO_0365 cc2c087650cbc9b121ccced65122ed27 458 Pfam PF00589 Phage integrase family 189 349 3.3E-8 T 18-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SHALO_0365 cc2c087650cbc9b121ccced65122ed27 458 Gene3D G3DSA:1.10.443.10 173 400 4.1E-15 T 18-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 SHALO_0942 593b29ef5b44cc6e7a175428c23320d2 90 TIGRFAM TIGR02229 caa3_sub_IV: caa(3)-type oxidase, subunit IV 6 88 1.1E-11 T 18-10-2018 IPR011743 Caa(3)-type oxidase, subunit IV SHALO_0942 593b29ef5b44cc6e7a175428c23320d2 90 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 13 81 2.4E-8 T 18-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 SHALO_1044 40ea5e59953f9e4526ec8139ade40048 211 Gene3D G3DSA:3.10.620.30 22 209 2.0E-46 T 18-10-2018 SHALO_1044 40ea5e59953f9e4526ec8139ade40048 211 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 53 161 7.2E-14 T 18-10-2018 IPR010319 Transglutaminase-like cysteine peptidase, predicted SHALO_1352 4cf0b034610d31f43b3839cb5471fac3 432 Pfam PF14535 AMP-binding enzyme C-terminal domain 334 430 9.3E-29 T 18-10-2018 IPR028154 AMP-dependent ligase, C-terminal SHALO_1352 4cf0b034610d31f43b3839cb5471fac3 432 PIRSF PIRSF006444 1 432 1.4E-190 T 18-10-2018 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716 SHALO_1352 4cf0b034610d31f43b3839cb5471fac3 432 Gene3D G3DSA:3.30.300.30 328 431 4.1E-30 T 18-10-2018 SHALO_1352 4cf0b034610d31f43b3839cb5471fac3 432 Pfam PF00501 AMP-binding enzyme 77 285 4.6E-13 T 18-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 SHALO_1352 4cf0b034610d31f43b3839cb5471fac3 432 SUPERFAMILY SSF56801 36 393 4.32E-50 T 18-10-2018 SHALO_1352 4cf0b034610d31f43b3839cb5471fac3 432 Gene3D G3DSA:3.40.50.12780 1 327 5.9E-120 T 18-10-2018 SHALO_0510 3827ada2bfac0827cae919895d2b95f0 414 SUPERFAMILY SSF140490 324 413 2.22E-29 T 18-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0510 3827ada2bfac0827cae919895d2b95f0 414 Gene3D G3DSA:3.10.20.600 229 324 4.6E-36 T 18-10-2018 SHALO_0510 3827ada2bfac0827cae919895d2b95f0 414 SUPERFAMILY SSF142019 4 237 2.75E-72 T 18-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0510 3827ada2bfac0827cae919895d2b95f0 414 SUPERFAMILY SSF142984 239 322 1.15E-23 T 18-10-2018 SHALO_0510 3827ada2bfac0827cae919895d2b95f0 414 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 45 216 1.2E-43 T 18-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0510 3827ada2bfac0827cae919895d2b95f0 414 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 329 410 4.6E-27 T 18-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0510 3827ada2bfac0827cae919895d2b95f0 414 Gene3D G3DSA:3.40.50.11540 50 228 7.6E-68 T 18-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0510 3827ada2bfac0827cae919895d2b95f0 414 Gene3D G3DSA:1.20.1440.230 325 414 2.5E-27 T 18-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0510 3827ada2bfac0827cae919895d2b95f0 414 Pfam PF10531 SLBB domain 241 289 4.8E-11 T 18-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0510 3827ada2bfac0827cae919895d2b95f0 414 SMART SM00928 327 372 7.2E-23 T 18-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0510 3827ada2bfac0827cae919895d2b95f0 414 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 340 351 - T 18-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0904 0a4734e12ca2641f1665cfcc29f3da66 212 Pfam PF13545 Crp-like helix-turn-helix domain 148 210 1.8E-12 T 18-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SHALO_0904 0a4734e12ca2641f1665cfcc29f3da66 212 SMART SM00419 154 204 3.8E-8 T 18-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SHALO_0904 0a4734e12ca2641f1665cfcc29f3da66 212 SMART SM00100 9 127 2.6E-16 T 18-10-2018 IPR000595 Cyclic nucleotide-binding domain SHALO_0904 0a4734e12ca2641f1665cfcc29f3da66 212 Gene3D G3DSA:2.60.120.10 2 139 2.4E-29 T 18-10-2018 IPR014710 RmlC-like jelly roll fold SHALO_0904 0a4734e12ca2641f1665cfcc29f3da66 212 SUPERFAMILY SSF46785 145 211 1.97E-9 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SHALO_0904 0a4734e12ca2641f1665cfcc29f3da66 212 Pfam PF00027 Cyclic nucleotide-binding domain 28 109 6.3E-17 T 18-10-2018 IPR000595 Cyclic nucleotide-binding domain SHALO_0904 0a4734e12ca2641f1665cfcc29f3da66 212 Gene3D G3DSA:1.10.10.10 144 212 7.8E-13 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_0904 0a4734e12ca2641f1665cfcc29f3da66 212 SUPERFAMILY SSF51206 3 137 3.14E-30 T 18-10-2018 IPR018490 Cyclic nucleotide-binding-like SHALO_2652 6ffb7cec93f69355b90546ad58905e0f 279 Pfam PF12849 PBP superfamily domain 29 252 2.1E-29 T 18-10-2018 IPR024370 PBP domain SHALO_2652 6ffb7cec93f69355b90546ad58905e0f 279 Gene3D G3DSA:3.40.190.10 105 222 3.3E-83 T 18-10-2018 SHALO_2652 6ffb7cec93f69355b90546ad58905e0f 279 SUPERFAMILY SSF53850 28 262 3.51E-24 T 18-10-2018 SHALO_2652 6ffb7cec93f69355b90546ad58905e0f 279 Gene3D G3DSA:3.40.190.10 32 252 3.3E-83 T 18-10-2018 SHALO_2548 7772a9ac539bbad3c8309e7f69dcd491 306 SUPERFAMILY SSF56784 42 300 3.04E-37 T 18-10-2018 IPR036412 HAD-like superfamily SHALO_2548 7772a9ac539bbad3c8309e7f69dcd491 306 Pfam PF13242 HAD-hyrolase-like 221 272 1.0E-10 T 18-10-2018 SHALO_2548 7772a9ac539bbad3c8309e7f69dcd491 306 Gene3D G3DSA:3.40.50.1000 123 221 3.2E-41 T 18-10-2018 IPR023214 HAD superfamily SHALO_2548 7772a9ac539bbad3c8309e7f69dcd491 306 Gene3D G3DSA:3.40.50.1000 44 271 3.2E-41 T 18-10-2018 IPR023214 HAD superfamily SHALO_2548 7772a9ac539bbad3c8309e7f69dcd491 306 Pfam PF13344 Haloacid dehalogenase-like hydrolase 45 130 3.7E-14 T 18-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA SHALO_0967 4ace8e3430fcbdf454adb05458b3e0f1 212 Gene3D G3DSA:3.30.70.20 1 211 5.9E-51 T 18-10-2018 SHALO_0967 4ace8e3430fcbdf454adb05458b3e0f1 212 Pfam PF13247 4Fe-4S dicluster domain 70 164 1.1E-24 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_0967 4ace8e3430fcbdf454adb05458b3e0f1 212 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 111 122 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_0967 4ace8e3430fcbdf454adb05458b3e0f1 212 SUPERFAMILY SSF54862 1 171 9.63E-51 T 18-10-2018 SHALO_1252 e39d0ad3345d78f10208d42fc4583745 294 Pfam PF11059 Protein of unknown function (DUF2860) 25 293 3.2E-35 T 18-10-2018 IPR016896 Protein of unknown function DUF2860 SHALO_1252 e39d0ad3345d78f10208d42fc4583745 294 PIRSF PIRSF028696 21 294 2.2E-31 T 18-10-2018 IPR016896 Protein of unknown function DUF2860 SHALO_0524 22208f8785a76ed3c6fcce84234bc1ca 140 Gene3D G3DSA:3.40.630.30 1 139 1.5E-27 T 18-10-2018 SHALO_0524 22208f8785a76ed3c6fcce84234bc1ca 140 SUPERFAMILY SSF55729 1 132 5.57E-23 T 18-10-2018 IPR016181 Acyl-CoA N-acyltransferase SHALO_0524 22208f8785a76ed3c6fcce84234bc1ca 140 Pfam PF00583 Acetyltransferase (GNAT) family 28 128 3.3E-12 T 18-10-2018 IPR000182 GNAT domain SHALO_0592 21364f4d353126948d13890393cd787f 553 Pfam PF13177 DNA polymerase III, delta subunit 20 178 4.8E-45 T 18-10-2018 SHALO_0592 21364f4d353126948d13890393cd787f 553 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 299 5.4E-124 T 18-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 SHALO_0592 21364f4d353126948d13890393cd787f 553 SMART SM00382 37 179 9.9E-8 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_0592 21364f4d353126948d13890393cd787f 553 Gene3D G3DSA:3.40.50.300 13 177 1.6E-100 T 18-10-2018 SHALO_0592 21364f4d353126948d13890393cd787f 553 Gene3D G3DSA:1.10.8.60 9 240 1.6E-100 T 18-10-2018 SHALO_0592 21364f4d353126948d13890393cd787f 553 SUPERFAMILY SSF52540 33 225 2.44E-58 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_1721 be8dae453b52ba1d7bb2f82a5d0ce124 341 Gene3D G3DSA:3.10.310.30 274 336 6.5E-10 T 18-10-2018 SHALO_1721 be8dae453b52ba1d7bb2f82a5d0ce124 341 SUPERFAMILY SSF64182 9 321 8.72E-15 T 18-10-2018 IPR038763 DHH phosphoesterase superfamily SHALO_1518 8887cf04170877c97bd1a89f646e0777 302 Gene3D G3DSA:3.40.50.1980 13 302 1.0E-47 T 18-10-2018 SHALO_1518 8887cf04170877c97bd1a89f646e0777 302 Pfam PF01497 Periplasmic binding protein 37 272 1.6E-22 T 18-10-2018 IPR002491 ABC transporter periplasmic binding domain SHALO_1518 8887cf04170877c97bd1a89f646e0777 302 SUPERFAMILY SSF53807 22 299 5.89E-49 T 18-10-2018 SHALO_0233 41ef61b6adc015a20c733c11b0513e67 344 SUPERFAMILY SSF53067 10 151 7.34E-39 T 18-10-2018 SHALO_0233 41ef61b6adc015a20c733c11b0513e67 344 Pfam PF06723 MreB/Mbl protein 12 339 3.2E-145 T 18-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 SHALO_0233 41ef61b6adc015a20c733c11b0513e67 344 Gene3D G3DSA:3.90.640.10 189 262 2.0E-127 T 18-10-2018 SHALO_0233 41ef61b6adc015a20c733c11b0513e67 344 Gene3D G3DSA:3.30.420.40 15 330 2.0E-127 T 18-10-2018 SHALO_0233 41ef61b6adc015a20c733c11b0513e67 344 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 10 339 4.3E-156 T 18-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 SHALO_0233 41ef61b6adc015a20c733c11b0513e67 344 Gene3D G3DSA:3.30.420.40 157 320 2.0E-127 T 18-10-2018 SHALO_0233 41ef61b6adc015a20c733c11b0513e67 344 SUPERFAMILY SSF53067 153 333 3.53E-47 T 18-10-2018 SHALO_0233 41ef61b6adc015a20c733c11b0513e67 344 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 303 329 1.0E-62 T 18-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 SHALO_0233 41ef61b6adc015a20c733c11b0513e67 344 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 1.0E-62 T 18-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 SHALO_0233 41ef61b6adc015a20c733c11b0513e67 344 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 135 154 1.0E-62 T 18-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 SHALO_0233 41ef61b6adc015a20c733c11b0513e67 344 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 1.0E-62 T 18-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 SHALO_0233 41ef61b6adc015a20c733c11b0513e67 344 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 190 210 1.0E-62 T 18-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 SHALO_2270 804319e0c15b350300a8ededbaf0a23c 168 Pfam PF00355 Rieske [2Fe-2S] domain 51 142 2.2E-12 T 18-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 SHALO_2270 804319e0c15b350300a8ededbaf0a23c 168 SUPERFAMILY SSF50022 29 161 1.06E-30 T 18-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 SHALO_2270 804319e0c15b350300a8ededbaf0a23c 168 Gene3D G3DSA:2.102.10.10 39 154 8.5E-31 T 18-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 SHALO_2270 804319e0c15b350300a8ededbaf0a23c 168 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 6 152 5.2E-43 T 18-10-2018 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 SHALO_2270 804319e0c15b350300a8ededbaf0a23c 168 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 5 43 2.3E-5 T 18-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal SHALO_2270 804319e0c15b350300a8ededbaf0a23c 168 PRINTS PR00162 Rieske 2Fe-2S subunit signature 94 105 1.1E-7 T 18-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 SHALO_2270 804319e0c15b350300a8ededbaf0a23c 168 PRINTS PR00162 Rieske 2Fe-2S subunit signature 127 139 1.1E-7 T 18-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 SHALO_2270 804319e0c15b350300a8ededbaf0a23c 168 PRINTS PR00162 Rieske 2Fe-2S subunit signature 115 127 1.1E-7 T 18-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 SHALO_0827 abafc59d0346c0423d821b35b04cd5a8 342 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 13 322 5.9E-74 T 18-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 SHALO_0827 abafc59d0346c0423d821b35b04cd5a8 342 Gene3D G3DSA:3.20.20.70 1 336 4.5E-113 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_0827 abafc59d0346c0423d821b35b04cd5a8 342 SUPERFAMILY SSF51395 1 329 1.58E-108 T 18-10-2018 SHALO_0618 72901a47d7b8d15ef49185ff1806be1d 329 Gene3D G3DSA:3.40.190.170 21 329 1.5E-125 T 18-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily SHALO_0618 72901a47d7b8d15ef49185ff1806be1d 329 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 28 281 2.3E-99 T 18-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 SHALO_0618 72901a47d7b8d15ef49185ff1806be1d 329 PIRSF PIRSF006470 1 329 7.7E-120 T 18-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 SHALO_0618 72901a47d7b8d15ef49185ff1806be1d 329 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 28 314 1.2E-99 T 18-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 SHALO_2495 f216050706e4d9f21c35c14fb0d29117 124 Pfam PF04266 ASCH domain 5 72 2.7E-4 T 18-10-2018 IPR007374 ASCH domain SHALO_2495 f216050706e4d9f21c35c14fb0d29117 124 SUPERFAMILY SSF88697 1 122 4.47E-24 T 18-10-2018 IPR015947 PUA-like superfamily SHALO_2495 f216050706e4d9f21c35c14fb0d29117 124 Gene3D G3DSA:2.30.130.30 2 106 3.9E-6 T 18-10-2018 SHALO_2495 f216050706e4d9f21c35c14fb0d29117 124 SMART SM01022 5 99 3.7E-7 T 18-10-2018 IPR007374 ASCH domain SHALO_1977 fe4f8af65bce0b28e89b484cbcf01f12 354 Gene3D G3DSA:3.30.413.10 255 353 4.8E-32 T 18-10-2018 SHALO_1977 fe4f8af65bce0b28e89b484cbcf01f12 354 Pfam PF04551 GcpE protein 7 346 2.9E-132 T 18-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 SHALO_1977 fe4f8af65bce0b28e89b484cbcf01f12 354 PIRSF PIRSF004640 1 354 1.1E-145 T 18-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 SHALO_1977 fe4f8af65bce0b28e89b484cbcf01f12 354 Gene3D G3DSA:3.20.20.20 1 254 9.8E-102 T 18-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 SHALO_1977 fe4f8af65bce0b28e89b484cbcf01f12 354 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 4 345 5.2E-121 T 18-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 SHALO_1977 fe4f8af65bce0b28e89b484cbcf01f12 354 SUPERFAMILY SSF51717 13 207 3.06E-11 T 18-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 SHALO_1977 fe4f8af65bce0b28e89b484cbcf01f12 354 SUPERFAMILY SSF56014 259 345 6.08E-9 T 18-10-2018 SHALO_1977 fe4f8af65bce0b28e89b484cbcf01f12 354 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 2 350 34.068 T 18-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 SHALO_2549 32f6d456a63f62fcd9ffd1fca2b0c91d 108 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 4 108 5.4E-43 T 18-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 SHALO_2549 32f6d456a63f62fcd9ffd1fca2b0c91d 108 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 4 108 23.057 T 18-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 SHALO_2549 32f6d456a63f62fcd9ffd1fca2b0c91d 108 SUPERFAMILY SSF103481 9 106 6.67E-6 T 18-10-2018 SHALO_1814 b19253ccbd7a8446b9d22a9667ab1d2c 198 PIRSF PIRSF020606 1 197 1.3E-73 T 18-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 SHALO_1814 b19253ccbd7a8446b9d22a9667ab1d2c 198 Pfam PF09997 Predicted membrane protein (DUF2238) 35 175 2.7E-56 T 18-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 SHALO_2347 55129b5877b24130652d387ce4f8450e 192 Pfam PF13353 4Fe-4S single cluster domain 12 107 2.4E-8 T 18-10-2018 SHALO_2347 55129b5877b24130652d387ce4f8450e 192 Pfam PF04055 Radical SAM superfamily 26 130 2.0E-11 T 18-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 SHALO_2347 55129b5877b24130652d387ce4f8450e 192 SUPERFAMILY SSF102114 24 102 2.35E-13 T 18-10-2018 SHALO_2347 55129b5877b24130652d387ce4f8450e 192 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 2 192 36.863 T 18-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 SHALO_2347 55129b5877b24130652d387ce4f8450e 192 PIRSF PIRSF000370 1 192 1.5E-41 T 18-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 SHALO_2347 55129b5877b24130652d387ce4f8450e 192 Gene3D G3DSA:3.20.20.70 1 192 5.4E-49 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_0895 fd5f55afdd2148575285ef9f73869ab5 384 Pfam PF07568 Histidine kinase 197 270 1.4E-20 T 18-10-2018 IPR011495 Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain SHALO_0895 fd5f55afdd2148575285ef9f73869ab5 384 Gene3D G3DSA:3.30.450.20 164 248 1.8E-8 T 18-10-2018 SHALO_0895 fd5f55afdd2148575285ef9f73869ab5 384 Gene3D G3DSA:3.30.565.10 253 381 3.1E-17 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_0895 fd5f55afdd2148575285ef9f73869ab5 384 SUPERFAMILY SSF55874 255 371 3.8E-11 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_2553 af1ad4ae3f7751efa9f60fcf3eea20d2 171 Pfam PF06226 Protein of unknown function (DUF1007) 6 155 3.8E-26 T 18-10-2018 IPR010412 Protein of unknown function DUF1007 SHALO_0144 4b1075ac51f67cf8a7c573f4b463adb9 75 Gene3D G3DSA:1.20.120.1430 12 74 5.9E-7 T 18-10-2018 SHALO_0549 5cbf7775a649b6b1d535283548d92197 346 Pfam PF01594 AI-2E family transporter 8 337 1.2E-37 T 18-10-2018 IPR002549 Transmembrane protein TqsA-like SHALO_0923 717fc0213c46acf77da60a1c0d0c244b 148 SMART SM00450 34 141 6.1E-5 T 18-10-2018 IPR001763 Rhodanese-like domain SHALO_0923 717fc0213c46acf77da60a1c0d0c244b 148 Gene3D G3DSA:3.40.250.10 22 142 6.6E-14 T 18-10-2018 IPR036873 Rhodanese-like domain superfamily SHALO_0923 717fc0213c46acf77da60a1c0d0c244b 148 Pfam PF00581 Rhodanese-like domain 34 135 5.0E-8 T 18-10-2018 IPR001763 Rhodanese-like domain SHALO_0923 717fc0213c46acf77da60a1c0d0c244b 148 SUPERFAMILY SSF52821 26 137 1.65E-13 T 18-10-2018 IPR036873 Rhodanese-like domain superfamily SHALO_1085 af34cbbe50e90862c3fdf55f2fd203f6 203 Pfam PF00929 Exonuclease 32 192 8.7E-24 T 18-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III SHALO_1085 af34cbbe50e90862c3fdf55f2fd203f6 203 SMART SM00479 30 203 1.1E-30 T 18-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III SHALO_1085 af34cbbe50e90862c3fdf55f2fd203f6 203 Gene3D G3DSA:3.30.420.10 24 202 3.8E-37 T 18-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 SHALO_1085 af34cbbe50e90862c3fdf55f2fd203f6 203 SUPERFAMILY SSF53098 28 199 1.12E-39 T 18-10-2018 IPR012337 Ribonuclease H-like superfamily SHALO_0117 abdf2a6376100a3468a1f80545cc1cc1 355 SMART SM00937 61 175 8.4E-56 T 18-10-2018 IPR005139 Peptide chain release factor GO:0006415 SHALO_0117 abdf2a6376100a3468a1f80545cc1cc1 355 Gene3D G3DSA:3.30.160.20 207 293 4.7E-92 T 18-10-2018 SHALO_0117 abdf2a6376100a3468a1f80545cc1cc1 355 SUPERFAMILY SSF75620 9 350 5.89E-130 T 18-10-2018 SHALO_0117 abdf2a6376100a3468a1f80545cc1cc1 355 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 2 354 38.925 T 18-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 SHALO_0117 abdf2a6376100a3468a1f80545cc1cc1 355 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 224 240 - T 18-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 SHALO_0117 abdf2a6376100a3468a1f80545cc1cc1 355 Pfam PF00472 RF-1 domain 207 317 2.3E-39 T 18-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 SHALO_0117 abdf2a6376100a3468a1f80545cc1cc1 355 Pfam PF03462 PCRF domain 11 200 1.8E-66 T 18-10-2018 IPR005139 Peptide chain release factor GO:0006415 SHALO_0117 abdf2a6376100a3468a1f80545cc1cc1 355 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 4 352 2.9E-157 T 18-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 SHALO_0117 abdf2a6376100a3468a1f80545cc1cc1 355 Gene3D G3DSA:3.30.70.1660 109 338 4.7E-92 T 18-10-2018 SHALO_2711 ae133aab30d3ce89119f3fb8213c7e01 230 Gene3D G3DSA:3.90.550.10 1 218 7.4E-24 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_2711 ae133aab30d3ce89119f3fb8213c7e01 230 SUPERFAMILY SSF53448 3 224 1.21E-23 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_2711 ae133aab30d3ce89119f3fb8213c7e01 230 Pfam PF00535 Glycosyl transferase family 2 3 124 3.7E-16 T 18-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 SHALO_2154 dcde4b2adbe624cb2aedb7a4a79edc6b 397 Gene3D G3DSA:3.10.400.10 6 141 1.7E-12 T 18-10-2018 SHALO_2154 dcde4b2adbe624cb2aedb7a4a79edc6b 397 Pfam PF01747 ATP-sulfurylase 149 349 6.7E-48 T 18-10-2018 IPR024951 Sulphate adenylyltransferase catalytic domain GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 SHALO_2154 dcde4b2adbe624cb2aedb7a4a79edc6b 397 SUPERFAMILY SSF88697 5 139 7.75E-19 T 18-10-2018 IPR015947 PUA-like superfamily SHALO_2154 dcde4b2adbe624cb2aedb7a4a79edc6b 397 Gene3D G3DSA:3.40.50.620 144 351 2.5E-47 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_2154 dcde4b2adbe624cb2aedb7a4a79edc6b 397 Pfam PF14306 PUA-like domain 6 137 9.1E-12 T 18-10-2018 IPR025980 ATP-sulfurylase PUA-like domain KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 SHALO_2154 dcde4b2adbe624cb2aedb7a4a79edc6b 397 SUPERFAMILY SSF52374 143 357 1.57E-52 T 18-10-2018 SHALO_0450 3deccd282ff2b13f055ceb07dab163ef 255 SUPERFAMILY SSF160920 1 248 2.22E-98 T 18-10-2018 IPR038021 Putative hydro-lyase SHALO_0450 3deccd282ff2b13f055ceb07dab163ef 255 Gene3D G3DSA:3.30.2040.10 115 227 5.7E-86 T 18-10-2018 SHALO_0450 3deccd282ff2b13f055ceb07dab163ef 255 Gene3D G3DSA:3.40.1640.10 15 243 5.7E-86 T 18-10-2018 SHALO_0450 3deccd282ff2b13f055ceb07dab163ef 255 PIRSF PIRSF029755 1 255 3.2E-103 T 18-10-2018 IPR016938 Uncharacterised protein family UPF0317 SHALO_0450 3deccd282ff2b13f055ceb07dab163ef 255 Pfam PF07286 Protein of unknown function (DUF1445) 105 247 5.0E-64 T 18-10-2018 IPR009906 D-glutamate cyclase SHALO_2357 28c90b80023e5557ebb945974a2da854 222 SUPERFAMILY SSF109755 5 216 1.78E-22 T 18-10-2018 SHALO_2357 28c90b80023e5557ebb945974a2da854 222 Pfam PF01895 PhoU domain 124 209 2.7E-7 T 18-10-2018 IPR026022 PhoU domain SHALO_2357 28c90b80023e5557ebb945974a2da854 222 Gene3D G3DSA:1.20.58.220 1 220 2.0E-23 T 18-10-2018 IPR038078 PhoU-like domain superfamily SHALO_2849 2704ec437201c486a46403e73651a3ac 176 Gene3D G3DSA:2.60.40.200 22 176 8.5E-48 T 18-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 SHALO_2849 2704ec437201c486a46403e73651a3ac 176 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 164 175 - T 18-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 SHALO_2849 2704ec437201c486a46403e73651a3ac 176 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 36 175 6.9E-30 T 18-10-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 SHALO_2849 2704ec437201c486a46403e73651a3ac 176 SUPERFAMILY SSF49329 25 176 1.44E-43 T 18-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 SHALO_2849 2704ec437201c486a46403e73651a3ac 176 ProSitePatterns PS00087 Copper/Zinc superoxide dismutase signature 1. 66 76 - T 18-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 SHALO_2592 b339f2d75aeaf6ee1eb125c6dd2b6bcd 713 Gene3D G3DSA:3.40.50.300 473 711 1.7E-72 T 18-10-2018 SHALO_2592 b339f2d75aeaf6ee1eb125c6dd2b6bcd 713 SMART SM00382 509 694 1.8E-14 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_2592 b339f2d75aeaf6ee1eb125c6dd2b6bcd 713 Gene3D G3DSA:3.90.70.10 24 146 1.5E-12 T 18-10-2018 SHALO_2592 b339f2d75aeaf6ee1eb125c6dd2b6bcd 713 Gene3D G3DSA:1.20.1560.10 156 469 1.0E-39 T 18-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 SHALO_2592 b339f2d75aeaf6ee1eb125c6dd2b6bcd 713 SUPERFAMILY SSF90123 153 467 3.92E-40 T 18-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 SHALO_2592 b339f2d75aeaf6ee1eb125c6dd2b6bcd 713 Pfam PF03412 Peptidase C39 family 20 140 3.5E-9 T 18-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 SHALO_2592 b339f2d75aeaf6ee1eb125c6dd2b6bcd 713 Pfam PF00005 ABC transporter 500 647 3.5E-31 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_2592 b339f2d75aeaf6ee1eb125c6dd2b6bcd 713 SUPERFAMILY SSF52540 477 707 1.78E-64 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_2592 b339f2d75aeaf6ee1eb125c6dd2b6bcd 713 Pfam PF00664 ABC transporter transmembrane region 173 427 4.5E-11 T 18-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 SHALO_2338 0b341e379eae2ffaf16bab6c54031a10 434 Pfam PF07690 Major Facilitator Superfamily 2 334 6.0E-39 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SHALO_2338 0b341e379eae2ffaf16bab6c54031a10 434 SUPERFAMILY SSF103473 2 426 3.14E-53 T 18-10-2018 IPR036259 MFS transporter superfamily SHALO_2338 0b341e379eae2ffaf16bab6c54031a10 434 PRINTS PR01036 Tetracycline resistance protein TetB signature 64 88 3.9E-6 T 18-10-2018 SHALO_2338 0b341e379eae2ffaf16bab6c54031a10 434 PRINTS PR01036 Tetracycline resistance protein TetB signature 2 24 3.9E-6 T 18-10-2018 SHALO_2338 0b341e379eae2ffaf16bab6c54031a10 434 PRINTS PR01036 Tetracycline resistance protein TetB signature 326 345 3.9E-6 T 18-10-2018 SHALO_2338 0b341e379eae2ffaf16bab6c54031a10 434 Gene3D G3DSA:1.20.1250.20 165 349 1.1E-14 T 18-10-2018 SHALO_2338 0b341e379eae2ffaf16bab6c54031a10 434 Gene3D G3DSA:1.20.1720.10 2 144 1.9E-33 T 18-10-2018 SHALO_1789 40b298265c5f6038afb3fce4b000856c 305 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 4 301 6.0E-97 T 18-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 SHALO_1789 40b298265c5f6038afb3fce4b000856c 305 SUPERFAMILY SSF81799 109 205 3.92E-24 T 18-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 SHALO_1789 40b298265c5f6038afb3fce4b000856c 305 Gene3D G3DSA:1.10.150.170 108 208 2.0E-84 T 18-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 SHALO_1789 40b298265c5f6038afb3fce4b000856c 305 SUPERFAMILY SSF53335 4 301 4.3E-36 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_1789 40b298265c5f6038afb3fce4b000856c 305 Pfam PF01795 MraW methylase family 3 302 8.8E-101 T 18-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 SHALO_1789 40b298265c5f6038afb3fce4b000856c 305 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 5 303 32.566 T 18-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 SHALO_1789 40b298265c5f6038afb3fce4b000856c 305 PIRSF PIRSF004486 1 304 5.5E-97 T 18-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 SHALO_1789 40b298265c5f6038afb3fce4b000856c 305 Gene3D G3DSA:3.40.50.150 5 299 2.0E-84 T 18-10-2018 SHALO_2738 3c637d3972cdc6180c4d188ba0b79a9c 445 TIGRFAM TIGR02713 allophanate_hyd: allophanate hydrolase 35 440 3.7E-178 T 18-10-2018 IPR014085 Allophanate hydrolase KEGG: 00220+3.5.1.54|KEGG: 00791+3.5.1.54|MetaCyc: PWY-5169|MetaCyc: PWY-5703 SHALO_2738 3c637d3972cdc6180c4d188ba0b79a9c 445 Gene3D G3DSA:1.20.58.1700 287 360 1.1E-153 T 18-10-2018 SHALO_2738 3c637d3972cdc6180c4d188ba0b79a9c 445 Pfam PF01425 Amidase 49 431 5.5E-87 T 18-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SHALO_2738 3c637d3972cdc6180c4d188ba0b79a9c 445 Gene3D G3DSA:3.90.1300.10 35 434 1.1E-153 T 18-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SHALO_2738 3c637d3972cdc6180c4d188ba0b79a9c 445 SUPERFAMILY SSF75304 2 439 4.84E-113 T 18-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SHALO_1997 a7cda756635f9001eb8412d09d0ccdd3 514 SUPERFAMILY SSF55073 358 511 2.67E-43 T 18-10-2018 IPR029787 Nucleotide cyclase SHALO_1997 a7cda756635f9001eb8412d09d0ccdd3 514 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 354 511 4.7E-45 T 18-10-2018 IPR000160 GGDEF domain SHALO_1997 a7cda756635f9001eb8412d09d0ccdd3 514 Gene3D G3DSA:3.30.70.270 349 512 1.0E-46 T 18-10-2018 SHALO_1997 a7cda756635f9001eb8412d09d0ccdd3 514 Pfam PF00990 Diguanylate cyclase, GGDEF domain 355 509 1.5E-38 T 18-10-2018 IPR000160 GGDEF domain SHALO_1997 a7cda756635f9001eb8412d09d0ccdd3 514 SMART SM00267 342 513 5.8E-42 T 18-10-2018 IPR000160 GGDEF domain SHALO_1218 081fabe5b61734c5cf77bad4c70aed80 120 Pfam PF04891 NifQ 22 115 8.3E-14 T 18-10-2018 IPR006975 NifQ GO:0009399|GO:0030151 SHALO_2111 a47bdd16afbf40bae971a1e6782e7d7e 403 SUPERFAMILY SSF53686 11 393 3.01E-128 T 18-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme SHALO_2111 a47bdd16afbf40bae971a1e6782e7d7e 403 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 10 397 47.483 T 18-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 SHALO_2111 a47bdd16afbf40bae971a1e6782e7d7e 403 Gene3D G3DSA:3.40.50.1100 18 214 1.9E-156 T 18-10-2018 SHALO_2111 a47bdd16afbf40bae971a1e6782e7d7e 403 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 15 394 2.9E-155 T 18-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 SHALO_2111 a47bdd16afbf40bae971a1e6782e7d7e 403 PIRSF PIRSF001413 3 402 4.0E-149 T 18-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 SHALO_2111 a47bdd16afbf40bae971a1e6782e7d7e 403 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 62 384 5.1E-37 T 18-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme SHALO_2111 a47bdd16afbf40bae971a1e6782e7d7e 403 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 89 103 - T 18-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 SHALO_2111 a47bdd16afbf40bae971a1e6782e7d7e 403 Gene3D G3DSA:3.40.50.1100 62 390 1.9E-156 T 18-10-2018 SHALO_2903 47005687b366451600598119f46111b0 390 SUPERFAMILY SSF53335 77 373 4.72E-58 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_2903 47005687b366451600598119f46111b0 390 SUPERFAMILY SSF88697 2 72 1.19E-12 T 18-10-2018 IPR015947 PUA-like superfamily SHALO_2903 47005687b366451600598119f46111b0 390 SMART SM00359 2 86 3.7E-11 T 18-10-2018 IPR002478 PUA domain GO:0003723 SHALO_2903 47005687b366451600598119f46111b0 390 Gene3D G3DSA:3.30.750.80 71 176 1.3E-34 T 18-10-2018 SHALO_2903 47005687b366451600598119f46111b0 390 Gene3D G3DSA:2.30.130.10 2 70 3.9E-16 T 18-10-2018 IPR036974 PUA domain superfamily GO:0003723 SHALO_2903 47005687b366451600598119f46111b0 390 Gene3D G3DSA:3.40.50.150 178 390 4.7E-58 T 18-10-2018 SHALO_2903 47005687b366451600598119f46111b0 390 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 164 353 2.1E-17 T 18-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 SHALO_2868 989756c936c72407c62de9ba9df4a47c 77 Pfam PF13192 Thioredoxin domain 1 75 1.9E-25 T 18-10-2018 IPR012336 Thioredoxin-like fold SHALO_2868 989756c936c72407c62de9ba9df4a47c 77 SUPERFAMILY SSF52833 1 75 1.23E-18 T 18-10-2018 IPR036249 Thioredoxin-like superfamily SHALO_2868 989756c936c72407c62de9ba9df4a47c 77 TIGRFAM TIGR00412 redox_disulf_2: redox-active disulfide protein 2 1 75 6.9E-23 T 18-10-2018 IPR005243 Redox-active disulphide protein 2 SHALO_2868 989756c936c72407c62de9ba9df4a47c 77 Gene3D G3DSA:3.40.30.10 1 75 1.6E-27 T 18-10-2018 SHALO_2868 989756c936c72407c62de9ba9df4a47c 77 PIRSF PIRSF037031 1 77 1.7E-31 T 18-10-2018 IPR005243 Redox-active disulphide protein 2 SHALO_0522 df030ff170fec0df0e37ba52cf4fa294 198 Gene3D G3DSA:1.10.287.990 20 86 2.5E-24 T 18-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 SHALO_0522 df030ff170fec0df0e37ba52cf4fa294 198 SUPERFAMILY SSF46609 1 87 2.23E-35 T 18-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 SHALO_0522 df030ff170fec0df0e37ba52cf4fa294 198 PIRSF PIRSF000349 1 198 3.8E-82 T 18-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 SHALO_0522 df030ff170fec0df0e37ba52cf4fa294 198 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 94 194 1.3E-38 T 18-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 SHALO_0522 df030ff170fec0df0e37ba52cf4fa294 198 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 4 87 4.5E-32 T 18-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 SHALO_0522 df030ff170fec0df0e37ba52cf4fa294 198 SUPERFAMILY SSF54719 89 197 7.86E-43 T 18-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 SHALO_0522 df030ff170fec0df0e37ba52cf4fa294 198 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 161 168 - T 18-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 SHALO_0522 df030ff170fec0df0e37ba52cf4fa294 198 Gene3D G3DSA:2.40.500.20 88 198 3.2E-43 T 18-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 SHALO_0522 df030ff170fec0df0e37ba52cf4fa294 198 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 6.6E-24 T 18-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 SHALO_0522 df030ff170fec0df0e37ba52cf4fa294 198 PRINTS PR01703 Manganese superoxide dismutase signature 159 171 6.6E-24 T 18-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 SHALO_0522 df030ff170fec0df0e37ba52cf4fa294 198 PRINTS PR01703 Manganese superoxide dismutase signature 70 83 6.6E-24 T 18-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 SHALO_0522 df030ff170fec0df0e37ba52cf4fa294 198 PRINTS PR01703 Manganese superoxide dismutase signature 123 131 6.6E-24 T 18-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 SHALO_0522 df030ff170fec0df0e37ba52cf4fa294 198 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 6.6E-24 T 18-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 SHALO_2487 316f12d7925c8926f2baf565f95fb670 480 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 25 478 1.8E-98 T 18-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 SHALO_2487 316f12d7925c8926f2baf565f95fb670 480 Pfam PF13286 Phosphohydrolase-associated domain 453 475 1.1E-5 T 18-10-2018 IPR026875 Phosphohydrolase-associated domain SHALO_2487 316f12d7925c8926f2baf565f95fb670 480 Gene3D G3DSA:1.10.3210.10 1 234 6.2E-49 T 18-10-2018 SHALO_2487 316f12d7925c8926f2baf565f95fb670 480 Gene3D G3DSA:1.10.3410.10 237 367 1.0E-21 T 18-10-2018 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain superfamily KEGG: 00230+3.1.5.1 SHALO_2487 316f12d7925c8926f2baf565f95fb670 480 Pfam PF01966 HD domain 58 140 5.5E-8 T 18-10-2018 IPR006674 HD domain SHALO_2487 316f12d7925c8926f2baf565f95fb670 480 SUPERFAMILY SSF109604 21 478 1.73E-55 T 18-10-2018 SHALO_2487 316f12d7925c8926f2baf565f95fb670 480 SMART SM00471 54 259 2.0E-9 T 18-10-2018 IPR003607 HD/PDEase domain SHALO_1880 d4f32da95702d42c78af2d511611e09d 372 Gene3D G3DSA:3.40.50.2300 45 351 2.3E-86 T 18-10-2018 SHALO_1880 d4f32da95702d42c78af2d511611e09d 372 Gene3D G3DSA:3.40.50.2300 139 268 2.3E-86 T 18-10-2018 SHALO_1880 d4f32da95702d42c78af2d511611e09d 372 SUPERFAMILY SSF53822 21 366 1.09E-76 T 18-10-2018 IPR028082 Periplasmic binding protein-like I SHALO_1880 d4f32da95702d42c78af2d511611e09d 372 Pfam PF13458 Periplasmic binding protein 22 362 2.6E-53 T 18-10-2018 IPR028081 Leucine-binding protein domain SHALO_0681 1e919ea603a9e0ea5782cc7d082f8787 294 Gene3D G3DSA:3.40.1380.10 66 210 1.2E-85 T 18-10-2018 SHALO_0681 1e919ea603a9e0ea5782cc7d082f8787 294 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 292 4.7E-92 T 18-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SHALO_0681 1e919ea603a9e0ea5782cc7d082f8787 294 SUPERFAMILY SSF52943 2 292 7.85E-78 T 18-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SHALO_0681 1e919ea603a9e0ea5782cc7d082f8787 294 Gene3D G3DSA:1.10.287.80 6 289 1.2E-85 T 18-10-2018 SHALO_0681 1e919ea603a9e0ea5782cc7d082f8787 294 Pfam PF00231 ATP synthase 3 292 4.1E-84 T 18-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SHALO_0681 1e919ea603a9e0ea5782cc7d082f8787 294 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 293 31.691 T 18-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SHALO_0681 1e919ea603a9e0ea5782cc7d082f8787 294 PRINTS PR00126 ATP synthase gamma subunit signature 79 98 5.3E-30 T 18-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SHALO_0681 1e919ea603a9e0ea5782cc7d082f8787 294 PRINTS PR00126 ATP synthase gamma subunit signature 271 292 5.3E-30 T 18-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SHALO_0681 1e919ea603a9e0ea5782cc7d082f8787 294 PRINTS PR00126 ATP synthase gamma subunit signature 240 259 5.3E-30 T 18-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SHALO_0681 1e919ea603a9e0ea5782cc7d082f8787 294 PRINTS PR00126 ATP synthase gamma subunit signature 172 189 5.3E-30 T 18-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SHALO_0078 fc072d6975b2e01197b549a39d15ab27 94 Gene3D G3DSA:1.10.260.40 17 94 6.6E-10 T 18-10-2018 SHALO_0078 fc072d6975b2e01197b549a39d15ab27 94 Pfam PF13744 Helix-turn-helix domain 22 92 3.8E-13 T 18-10-2018 IPR039554 HigA2-like, helix-turn-helix domain SHALO_0078 fc072d6975b2e01197b549a39d15ab27 94 SUPERFAMILY SSF47413 23 92 2.6E-8 T 18-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 SHALO_1692 ca23456834e254ada9ebb99d2af324f4 431 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 34 427 4.8E-161 T 18-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 SHALO_1692 ca23456834e254ada9ebb99d2af324f4 431 PIRSF PIRSF000099 2 431 5.4E-168 T 18-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 SHALO_1692 ca23456834e254ada9ebb99d2af324f4 431 SUPERFAMILY SSF53720 29 428 1.02E-81 T 18-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 SHALO_1692 ca23456834e254ada9ebb99d2af324f4 431 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 5 428 40.788 T 18-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 SHALO_1692 ca23456834e254ada9ebb99d2af324f4 431 Gene3D G3DSA:3.40.50.1980 234 350 6.4E-122 T 18-10-2018 SHALO_1692 ca23456834e254ada9ebb99d2af324f4 431 PRINTS PR00083 Histidinol dehydrogenase signature 230 251 1.5E-79 T 18-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 SHALO_1692 ca23456834e254ada9ebb99d2af324f4 431 PRINTS PR00083 Histidinol dehydrogenase signature 201 226 1.5E-79 T 18-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 SHALO_1692 ca23456834e254ada9ebb99d2af324f4 431 PRINTS PR00083 Histidinol dehydrogenase signature 362 380 1.5E-79 T 18-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 SHALO_1692 ca23456834e254ada9ebb99d2af324f4 431 PRINTS PR00083 Histidinol dehydrogenase signature 321 346 1.5E-79 T 18-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 SHALO_1692 ca23456834e254ada9ebb99d2af324f4 431 PRINTS PR00083 Histidinol dehydrogenase signature 252 271 1.5E-79 T 18-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 SHALO_1692 ca23456834e254ada9ebb99d2af324f4 431 PRINTS PR00083 Histidinol dehydrogenase signature 137 163 1.5E-79 T 18-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 SHALO_1692 ca23456834e254ada9ebb99d2af324f4 431 PRINTS PR00083 Histidinol dehydrogenase signature 171 197 1.5E-79 T 18-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 SHALO_1692 ca23456834e254ada9ebb99d2af324f4 431 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 1.5E-79 T 18-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 SHALO_1692 ca23456834e254ada9ebb99d2af324f4 431 Pfam PF00815 Histidinol dehydrogenase 20 428 3.0E-167 T 18-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 SHALO_1692 ca23456834e254ada9ebb99d2af324f4 431 Gene3D G3DSA:3.40.50.1980 30 232 6.4E-122 T 18-10-2018 SHALO_1420 0b1e5a9e421b7541cd691b8c26d51660 322 PIRSF PIRSF000102 2 315 1.7E-106 T 18-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SHALO_1420 0b1e5a9e421b7541cd691b8c26d51660 322 SUPERFAMILY SSF51735 6 146 1.06E-47 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_1420 0b1e5a9e421b7541cd691b8c26d51660 322 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 150 307 5.3E-28 T 18-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 SHALO_1420 0b1e5a9e421b7541cd691b8c26d51660 322 PRINTS PR00086 L-lactate dehydrogenase signature 31 55 3.3E-23 T 18-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SHALO_1420 0b1e5a9e421b7541cd691b8c26d51660 322 PRINTS PR00086 L-lactate dehydrogenase signature 119 139 3.3E-23 T 18-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SHALO_1420 0b1e5a9e421b7541cd691b8c26d51660 322 PRINTS PR00086 L-lactate dehydrogenase signature 6 30 3.3E-23 T 18-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SHALO_1420 0b1e5a9e421b7541cd691b8c26d51660 322 PRINTS PR00086 L-lactate dehydrogenase signature 143 161 3.3E-23 T 18-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SHALO_1420 0b1e5a9e421b7541cd691b8c26d51660 322 PRINTS PR00086 L-lactate dehydrogenase signature 173 186 3.3E-23 T 18-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SHALO_1420 0b1e5a9e421b7541cd691b8c26d51660 322 Gene3D G3DSA:3.40.50.720 2 146 1.3E-52 T 18-10-2018 SHALO_1420 0b1e5a9e421b7541cd691b8c26d51660 322 Gene3D G3DSA:3.90.110.10 147 312 1.7E-52 T 18-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 SHALO_1420 0b1e5a9e421b7541cd691b8c26d51660 322 SUPERFAMILY SSF56327 146 308 1.73E-48 T 18-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 SHALO_1420 0b1e5a9e421b7541cd691b8c26d51660 322 Hamap MF_00487 Malate dehydrogenase [mdh]. 5 309 42.155 T 18-10-2018 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 SHALO_1420 0b1e5a9e421b7541cd691b8c26d51660 322 TIGRFAM TIGR01763 MalateDH_bact: malate dehydrogenase, NAD-dependent 5 308 2.4E-116 T 18-10-2018 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 SHALO_1420 0b1e5a9e421b7541cd691b8c26d51660 322 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 6 145 7.2E-41 T 18-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 SHALO_2423 9f5cca43ae9d2d824abd0bc41cc58b8a 61 Pfam PF00253 Ribosomal protein S14p/S29e 9 60 8.8E-24 T 18-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_2423 9f5cca43ae9d2d824abd0bc41cc58b8a 61 Hamap MF_01364_B 30S ribosomal protein S14 type Z [rpsZ]. 1 61 25.579 T 18-10-2018 IPR023053 Ribosomal protein S14, type Z SHALO_2423 9f5cca43ae9d2d824abd0bc41cc58b8a 61 SUPERFAMILY SSF57716 3 61 3.56E-21 T 18-10-2018 SHALO_2423 9f5cca43ae9d2d824abd0bc41cc58b8a 61 Gene3D G3DSA:4.10.830.10 1 61 3.0E-30 T 18-10-2018 SHALO_2423 9f5cca43ae9d2d824abd0bc41cc58b8a 61 ProSitePatterns PS00527 Ribosomal protein S14 signature. 23 45 - T 18-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_1310 a8e81374c45e5b546d78163d98aea86e 375 Gene3D G3DSA:3.20.20.100 26 373 3.4E-33 T 18-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily SHALO_1310 a8e81374c45e5b546d78163d98aea86e 375 Pfam PF00248 Aldo/keto reductase family 36 362 2.1E-31 T 18-10-2018 IPR023210 NADP-dependent oxidoreductase domain SHALO_1310 a8e81374c45e5b546d78163d98aea86e 375 SUPERFAMILY SSF51430 27 364 1.83E-38 T 18-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily SHALO_2271 f14fb0a7a727cc1c316d6c8ca4abfbca 395 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 261 370 8.6E-26 T 18-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 SHALO_2271 f14fb0a7a727cc1c316d6c8ca4abfbca 395 Gene3D G3DSA:1.20.810.10 1 392 7.9E-125 T 18-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 SHALO_2271 f14fb0a7a727cc1c316d6c8ca4abfbca 395 SUPERFAMILY SSF81342 2 263 2.04E-80 T 18-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 SHALO_2271 f14fb0a7a727cc1c316d6c8ca4abfbca 395 SUPERFAMILY SSF81648 217 363 1.03E-33 T 18-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 SHALO_2271 f14fb0a7a727cc1c316d6c8ca4abfbca 395 Pfam PF00033 Cytochrome b/b6/petB 3 189 7.1E-58 T 18-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 SHALO_2805 b64263bcb584fa137d71cab2105b8efb 498 Gene3D G3DSA:3.40.309.10 259 456 5.0E-156 T 18-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 SHALO_2805 b64263bcb584fa137d71cab2105b8efb 498 SUPERFAMILY SSF53720 7 490 5.24E-155 T 18-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 SHALO_2805 b64263bcb584fa137d71cab2105b8efb 498 Gene3D G3DSA:3.40.605.10 16 484 5.0E-156 T 18-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 SHALO_2805 b64263bcb584fa137d71cab2105b8efb 498 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 287 298 - T 18-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 SHALO_2805 b64263bcb584fa137d71cab2105b8efb 498 Pfam PF00171 Aldehyde dehydrogenase family 20 486 6.1E-157 T 18-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 SHALO_2805 b64263bcb584fa137d71cab2105b8efb 498 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 254 261 - T 18-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 SHALO_1731 5af3ba98a91dc53020da6ad9251729f1 208 Gene3D G3DSA:3.40.50.300 3 113 3.8E-17 T 18-10-2018 SHALO_1731 5af3ba98a91dc53020da6ad9251729f1 208 Pfam PF13177 DNA polymerase III, delta subunit 41 111 2.3E-13 T 18-10-2018 SHALO_1731 5af3ba98a91dc53020da6ad9251729f1 208 SUPERFAMILY SSF52540 39 115 7.83E-13 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_2451 b94c8945fea533e9d713a654ca650c4b 357 Hamap MF_00300 Chorismate synthase [aroC]. 8 349 36.583 T 18-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 SHALO_2451 b94c8945fea533e9d713a654ca650c4b 357 PIRSF PIRSF001456 1 356 8.1E-135 T 18-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 SHALO_2451 b94c8945fea533e9d713a654ca650c4b 357 SUPERFAMILY SSF103263 1 348 9.03E-138 T 18-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 SHALO_2451 b94c8945fea533e9d713a654ca650c4b 357 ProSitePatterns PS00787 Chorismate synthase signature 1. 14 29 - T 18-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 SHALO_2451 b94c8945fea533e9d713a654ca650c4b 357 ProSitePatterns PS00788 Chorismate synthase signature 2. 122 138 - T 18-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 SHALO_2451 b94c8945fea533e9d713a654ca650c4b 357 Gene3D G3DSA:3.60.150.10 1 357 1.9E-149 T 18-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 SHALO_2451 b94c8945fea533e9d713a654ca650c4b 357 TIGRFAM TIGR00033 aroC: chorismate synthase 9 345 1.2E-123 T 18-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 SHALO_2451 b94c8945fea533e9d713a654ca650c4b 357 ProSitePatterns PS00789 Chorismate synthase signature 3. 316 332 - T 18-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 SHALO_2451 b94c8945fea533e9d713a654ca650c4b 357 Pfam PF01264 Chorismate synthase 8 342 1.8E-133 T 18-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 SHALO_2440 78f147a0ac3bbafeae0a768632e7a0cc 182 Pfam PF01351 Ribonuclease HII 3 173 1.6E-29 T 18-10-2018 IPR024567 Ribonuclease HII/HIII domain SHALO_2440 78f147a0ac3bbafeae0a768632e7a0cc 182 SUPERFAMILY SSF53098 2 173 1.82E-53 T 18-10-2018 IPR012337 Ribonuclease H-like superfamily SHALO_2440 78f147a0ac3bbafeae0a768632e7a0cc 182 Gene3D G3DSA:3.30.420.10 1 181 8.0E-62 T 18-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 SHALO_2610 8715f152364847ca039dd18477c9e144 222 SUPERFAMILY SSF161098 20 209 6.41E-46 T 18-10-2018 IPR035906 MetI-like superfamily SHALO_2610 8715f152364847ca039dd18477c9e144 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 19 115 1.4E-21 T 18-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 SHALO_2610 8715f152364847ca039dd18477c9e144 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 40 221 9.7E-27 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 SHALO_2610 8715f152364847ca039dd18477c9e144 222 Gene3D G3DSA:1.10.3720.10 7 222 3.3E-55 T 18-10-2018 IPR035906 MetI-like superfamily SHALO_2532 4214b79f25b80fb2a789ff65ccc9dd0d 393 SUPERFAMILY SSF103473 7 383 1.96E-48 T 18-10-2018 IPR036259 MFS transporter superfamily SHALO_2532 4214b79f25b80fb2a789ff65ccc9dd0d 393 Pfam PF07690 Major Facilitator Superfamily 12 267 1.6E-24 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SHALO_2532 4214b79f25b80fb2a789ff65ccc9dd0d 393 Gene3D G3DSA:1.20.1250.20 3 385 6.2E-50 T 18-10-2018 SHALO_2532 4214b79f25b80fb2a789ff65ccc9dd0d 393 PRINTS PR01035 Tetracycline resistance protein signature 337 360 4.3E-10 T 18-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 SHALO_2532 4214b79f25b80fb2a789ff65ccc9dd0d 393 PRINTS PR01035 Tetracycline resistance protein signature 40 59 4.3E-10 T 18-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 SHALO_2532 4214b79f25b80fb2a789ff65ccc9dd0d 393 PRINTS PR01035 Tetracycline resistance protein signature 302 322 4.3E-10 T 18-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 SHALO_2532 4214b79f25b80fb2a789ff65ccc9dd0d 393 PRINTS PR01035 Tetracycline resistance protein signature 250 270 4.3E-10 T 18-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 SHALO_2532 4214b79f25b80fb2a789ff65ccc9dd0d 393 PRINTS PR01035 Tetracycline resistance protein signature 71 95 4.3E-10 T 18-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 SHALO_2114 36ee2cce6f8c7921155e6db5f641896b 603 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 603 36.822 T 18-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 SHALO_2114 36ee2cce6f8c7921155e6db5f641896b 603 Gene3D G3DSA:3.40.50.10490 248 602 1.9E-122 T 18-10-2018 SHALO_2114 36ee2cce6f8c7921155e6db5f641896b 603 SUPERFAMILY SSF53697 245 603 3.53E-92 T 18-10-2018 SHALO_2114 36ee2cce6f8c7921155e6db5f641896b 603 Pfam PF01380 SIS domain 288 412 4.8E-29 T 18-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 SHALO_2114 36ee2cce6f8c7921155e6db5f641896b 603 Pfam PF01380 SIS domain 466 567 4.3E-10 T 18-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 SHALO_2114 36ee2cce6f8c7921155e6db5f641896b 603 Pfam PF13522 Glutamine amidotransferase domain 64 193 6.0E-20 T 18-10-2018 SHALO_2114 36ee2cce6f8c7921155e6db5f641896b 603 Gene3D G3DSA:3.60.20.10 2 238 2.2E-66 T 18-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal SHALO_2114 36ee2cce6f8c7921155e6db5f641896b 603 Gene3D G3DSA:3.40.50.10490 444 588 1.9E-122 T 18-10-2018 SHALO_2114 36ee2cce6f8c7921155e6db5f641896b 603 SUPERFAMILY SSF56235 2 228 4.8E-62 T 18-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal SHALO_2114 36ee2cce6f8c7921155e6db5f641896b 603 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 603 9.8E-233 T 18-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 SHALO_0986 df87c1db09fe100925e4972f2f9946cc 255 Gene3D G3DSA:3.40.50.150 19 255 1.2E-49 T 18-10-2018 SHALO_0986 df87c1db09fe100925e4972f2f9946cc 255 Pfam PF08241 Methyltransferase domain 38 128 9.9E-23 T 18-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 SHALO_0986 df87c1db09fe100925e4972f2f9946cc 255 SUPERFAMILY SSF53335 21 208 4.45E-37 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_0349 b8d508de4ac4b278229011a96b71f8cc 147 SUPERFAMILY SSF160387 51 143 3.92E-11 T 18-10-2018 SHALO_0349 b8d508de4ac4b278229011a96b71f8cc 147 Pfam PF05573 NosL 18 109 8.5E-7 T 18-10-2018 IPR008719 Nitrous oxide reductase accessory protein NosL SHALO_1581 d1330a29c453fe818a071dc1cdb6a1d9 317 Gene3D G3DSA:3.50.50.60 6 294 3.5E-56 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SHALO_1581 d1330a29c453fe818a071dc1cdb6a1d9 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 270 292 1.1E-20 T 18-10-2018 SHALO_1581 d1330a29c453fe818a071dc1cdb6a1d9 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.1E-20 T 18-10-2018 SHALO_1581 d1330a29c453fe818a071dc1cdb6a1d9 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 243 259 1.1E-20 T 18-10-2018 SHALO_1581 d1330a29c453fe818a071dc1cdb6a1d9 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 161 179 1.1E-20 T 18-10-2018 SHALO_1581 d1330a29c453fe818a071dc1cdb6a1d9 317 SUPERFAMILY SSF51905 1 315 5.87E-34 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SHALO_1581 d1330a29c453fe818a071dc1cdb6a1d9 317 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 8 289 1.5E-57 T 18-10-2018 SHALO_1581 d1330a29c453fe818a071dc1cdb6a1d9 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 157 181 8.6E-19 T 18-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHALO_1581 d1330a29c453fe818a071dc1cdb6a1d9 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 122 130 8.6E-19 T 18-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHALO_1581 d1330a29c453fe818a071dc1cdb6a1d9 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 280 298 8.6E-19 T 18-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHALO_1581 d1330a29c453fe818a071dc1cdb6a1d9 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 6 28 8.6E-19 T 18-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHALO_1581 d1330a29c453fe818a071dc1cdb6a1d9 317 Gene3D G3DSA:3.50.50.60 134 250 3.5E-56 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SHALO_0337 916481863b53444544036190c1b9c078 327 Gene3D G3DSA:3.40.190.10 36 319 7.7E-64 T 18-10-2018 SHALO_0337 916481863b53444544036190c1b9c078 327 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 52 240 2.2E-6 T 18-10-2018 SHALO_0337 916481863b53444544036190c1b9c078 327 Gene3D G3DSA:3.40.190.10 102 221 7.7E-64 T 18-10-2018 SHALO_0337 916481863b53444544036190c1b9c078 327 SUPERFAMILY SSF53850 36 306 2.03E-26 T 18-10-2018 SHALO_0337 916481863b53444544036190c1b9c078 327 PIRSF PIRSF027386 1 323 6.6E-101 T 18-10-2018 IPR027024 ABC-type uncharacterised transport system, substrate-binding component, TM0202 type SHALO_3002 6f5d5cc99843243eb8ac5d881d3d6d35 233 Pfam PF13649 Methyltransferase domain 41 130 4.9E-7 T 18-10-2018 SHALO_3002 6f5d5cc99843243eb8ac5d881d3d6d35 233 Gene3D G3DSA:3.40.50.150 3 211 1.3E-19 T 18-10-2018 SHALO_3002 6f5d5cc99843243eb8ac5d881d3d6d35 233 SUPERFAMILY SSF53335 9 196 3.66E-21 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_1356 77b096a588c35d0a9bb8c0f258bb4f7e 608 Gene3D G3DSA:3.40.50.970 368 531 1.5E-20 T 18-10-2018 SHALO_1356 77b096a588c35d0a9bb8c0f258bb4f7e 608 SUPERFAMILY SSF52518 357 533 2.0E-29 T 18-10-2018 IPR029061 Thiamin diphosphate-binding fold SHALO_1356 77b096a588c35d0a9bb8c0f258bb4f7e 608 PIRSF PIRSF006439 1 608 2.8E-215 T 18-10-2018 IPR017721 Indolepyruvate ferredoxin oxidoreductase, alpha subunit GO:0043805|GO:0055114 SHALO_1356 77b096a588c35d0a9bb8c0f258bb4f7e 608 SUPERFAMILY SSF52922 239 301 9.03E-9 T 18-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 SHALO_1356 77b096a588c35d0a9bb8c0f258bb4f7e 608 Gene3D G3DSA:3.30.70.20 536 604 6.6E-7 T 18-10-2018 SHALO_1356 77b096a588c35d0a9bb8c0f258bb4f7e 608 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 19 184 6.7E-7 T 18-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 SHALO_1356 77b096a588c35d0a9bb8c0f258bb4f7e 608 Gene3D G3DSA:3.40.50.970 1 189 1.9E-45 T 18-10-2018 SHALO_1356 77b096a588c35d0a9bb8c0f258bb4f7e 608 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 390 519 6.7E-23 T 18-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 SHALO_1356 77b096a588c35d0a9bb8c0f258bb4f7e 608 SUPERFAMILY SSF52518 7 200 7.36E-48 T 18-10-2018 IPR029061 Thiamin diphosphate-binding fold SHALO_1356 77b096a588c35d0a9bb8c0f258bb4f7e 608 Gene3D G3DSA:3.40.50.920 232 324 7.9E-7 T 18-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 SHALO_1356 77b096a588c35d0a9bb8c0f258bb4f7e 608 SUPERFAMILY SSF54862 530 605 4.19E-11 T 18-10-2018 SHALO_1494 487ece0709cf8849631647223b98152e 177 SUPERFAMILY SSF69118 1 174 3.48E-33 T 18-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 SHALO_1494 487ece0709cf8849631647223b98152e 177 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 61 107 2.5E-17 T 18-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 SHALO_1494 487ece0709cf8849631647223b98152e 177 Pfam PF02627 Carboxymuconolactone decarboxylase family 56 120 2.3E-7 T 18-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 SHALO_1494 487ece0709cf8849631647223b98152e 177 Gene3D G3DSA:1.20.1290.10 14 177 4.0E-22 T 18-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 SHALO_1119 1ca113be152d250cbca894ce227caffa 88 Gene3D G3DSA:4.10.640.10 1 77 1.4E-22 T 18-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_1119 1ca113be152d250cbca894ce227caffa 88 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 74 8.0E-19 T 18-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_1119 1ca113be152d250cbca894ce227caffa 88 TIGRFAM TIGR00165 S18: ribosomal protein bS18 6 72 4.8E-30 T 18-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_1119 1ca113be152d250cbca894ce227caffa 88 PRINTS PR00974 Ribosomal protein S18 family signature 29 39 3.3E-12 T 18-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_1119 1ca113be152d250cbca894ce227caffa 88 PRINTS PR00974 Ribosomal protein S18 family signature 39 46 3.3E-12 T 18-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_1119 1ca113be152d250cbca894ce227caffa 88 PRINTS PR00974 Ribosomal protein S18 family signature 47 61 3.3E-12 T 18-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_1119 1ca113be152d250cbca894ce227caffa 88 PRINTS PR00974 Ribosomal protein S18 family signature 61 71 3.3E-12 T 18-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_1119 1ca113be152d250cbca894ce227caffa 88 SUPERFAMILY SSF46911 4 74 2.49E-23 T 18-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_1119 1ca113be152d250cbca894ce227caffa 88 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 1 74 18.138 T 18-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_1119 1ca113be152d250cbca894ce227caffa 88 Pfam PF01084 Ribosomal protein S18 18 68 2.3E-21 T 18-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_2225 685d71e754939ab6b105b5b25c9e41a5 594 SUPERFAMILY SSF52518 1 180 8.83E-38 T 18-10-2018 IPR029061 Thiamin diphosphate-binding fold SHALO_2225 685d71e754939ab6b105b5b25c9e41a5 594 SUPERFAMILY SSF52467 161 365 4.91E-36 T 18-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily SHALO_2225 685d71e754939ab6b105b5b25c9e41a5 594 SUPERFAMILY SSF52518 368 586 1.45E-45 T 18-10-2018 IPR029061 Thiamin diphosphate-binding fold SHALO_2225 685d71e754939ab6b105b5b25c9e41a5 594 Gene3D G3DSA:3.40.50.970 364 547 4.5E-94 T 18-10-2018 SHALO_2225 685d71e754939ab6b105b5b25c9e41a5 594 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 197 333 4.4E-31 T 18-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 SHALO_2225 685d71e754939ab6b105b5b25c9e41a5 594 Gene3D G3DSA:3.40.50.1220 204 363 4.5E-94 T 18-10-2018 SHALO_2225 685d71e754939ab6b105b5b25c9e41a5 594 Gene3D G3DSA:3.40.50.970 1 182 1.2E-48 T 18-10-2018 SHALO_2225 685d71e754939ab6b105b5b25c9e41a5 594 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 177 1.8E-39 T 18-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 SHALO_2225 685d71e754939ab6b105b5b25c9e41a5 594 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 395 547 5.7E-32 T 18-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 SHALO_2842 b2979b1e1cdaa5c2f5af47e7277ff2c6 128 Pfam PF13115 YtkA-like 31 110 1.1E-20 T 18-10-2018 IPR032693 YtkA-like domain SHALO_0243 2b653b5fa961906b08637ea9663a4e37 165 SUPERFAMILY SSF54534 83 158 2.22E-21 T 18-10-2018 SHALO_0243 2b653b5fa961906b08637ea9663a4e37 165 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 84 158 8.6E-26 T 18-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 SHALO_0243 2b653b5fa961906b08637ea9663a4e37 165 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 7 156 2.8E-53 T 18-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 SHALO_0243 2b653b5fa961906b08637ea9663a4e37 165 SUPERFAMILY SSF46557 6 80 3.79E-25 T 18-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 SHALO_0243 2b653b5fa961906b08637ea9663a4e37 165 Gene3D G3DSA:1.10.287.180 4 77 3.3E-27 T 18-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 SHALO_0243 2b653b5fa961906b08637ea9663a4e37 165 PIRSF PIRSF006092 1 160 1.5E-47 T 18-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 SHALO_0243 2b653b5fa961906b08637ea9663a4e37 165 Gene3D G3DSA:3.10.50.30 79 159 1.1E-24 T 18-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 SHALO_0243 2b653b5fa961906b08637ea9663a4e37 165 Pfam PF03449 Transcription elongation factor, N-terminal 7 76 7.4E-27 T 18-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 SHALO_0243 2b653b5fa961906b08637ea9663a4e37 165 Hamap MF_00105 Transcription elongation factor GreA [greA]. 4 157 28.976 T 18-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 SHALO_2096 7e6135b21f4a7db1ca5c63f3310a80d7 351 Pfam PF05145 Transition state regulatory protein AbrB 33 345 2.4E-82 T 18-10-2018 IPR007820 AbrB family GO:0010468|GO:0016021 SHALO_2096 7e6135b21f4a7db1ca5c63f3310a80d7 351 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 11 165 5.0E-36 T 18-10-2018 IPR017516 AbrB duplication SHALO_2096 7e6135b21f4a7db1ca5c63f3310a80d7 351 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 190 345 7.3E-30 T 18-10-2018 IPR017516 AbrB duplication SHALO_2096 7e6135b21f4a7db1ca5c63f3310a80d7 351 PIRSF PIRSF038991 3 351 2.1E-92 T 18-10-2018 IPR007820 AbrB family GO:0010468|GO:0016021 SHALO_1517 f20ab686be4bd1b44b1aa767b9cbda3d 255 Gene3D G3DSA:3.40.50.300 3 254 2.3E-63 T 18-10-2018 SHALO_1517 f20ab686be4bd1b44b1aa767b9cbda3d 255 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_1517 f20ab686be4bd1b44b1aa767b9cbda3d 255 SUPERFAMILY SSF52540 4 230 1.23E-56 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_1517 f20ab686be4bd1b44b1aa767b9cbda3d 255 SMART SM00382 28 216 1.2E-12 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_1517 f20ab686be4bd1b44b1aa767b9cbda3d 255 Pfam PF00005 ABC transporter 19 168 8.8E-29 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_0334 e1119de7fd918c8836a6eeefc7f58897 204 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 3 191 1.1E-6 T 18-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 SHALO_0334 e1119de7fd918c8836a6eeefc7f58897 204 SUPERFAMILY SSF56300 3 181 4.37E-15 T 18-10-2018 SHALO_1636 678b0a916bd1eba80cbacd3254c38aa9 453 PIRSF PIRSF004539 3 451 2.8E-170 T 18-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 SHALO_1636 678b0a916bd1eba80cbacd3254c38aa9 453 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 8 383 8.1E-137 T 18-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 SHALO_1636 678b0a916bd1eba80cbacd3254c38aa9 453 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 8 450 7.9E-154 T 18-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 SHALO_1180 f55762a2c6aa81ee964342d572e030a2 294 SMART SM00479 2 178 5.1E-14 T 18-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III SHALO_1180 f55762a2c6aa81ee964342d572e030a2 294 Pfam PF00929 Exonuclease 4 164 1.4E-13 T 18-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III SHALO_1180 f55762a2c6aa81ee964342d572e030a2 294 Gene3D G3DSA:3.30.420.10 1 179 3.4E-30 T 18-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 SHALO_1180 f55762a2c6aa81ee964342d572e030a2 294 SUPERFAMILY SSF53098 1 203 7.59E-29 T 18-10-2018 IPR012337 Ribonuclease H-like superfamily SHALO_2552 97366df205a15d325d56c181295173a3 475 Pfam PF03824 High-affinity nickel-transport protein 257 359 1.5E-12 T 18-10-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 SHALO_2552 97366df205a15d325d56c181295173a3 475 Pfam PF03824 High-affinity nickel-transport protein 383 446 5.4E-8 T 18-10-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 SHALO_2552 97366df205a15d325d56c181295173a3 475 ProSitePatterns PS00018 EF-hand calcium-binding domain. 66 78 - T 18-10-2018 IPR018247 EF-Hand 1, calcium-binding site SHALO_1631 01a56e0aa3c6d4833353e8f990f5652b 267 SUPERFAMILY SSF52402 18 199 4.41E-32 T 18-10-2018 SHALO_1631 01a56e0aa3c6d4833353e8f990f5652b 267 TIGRFAM TIGR00268 TIGR00268: TIGR00268 family protein 4 256 2.1E-73 T 18-10-2018 IPR005232 Pyridinium-3,5-bisthiocarboxylic acid mononucleotide synthase LarE GO:0016783 SHALO_1631 01a56e0aa3c6d4833353e8f990f5652b 267 Gene3D G3DSA:3.40.50.620 2 164 2.9E-22 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_1631 01a56e0aa3c6d4833353e8f990f5652b 267 PIRSF PIRSF006661 1 265 1.1E-90 T 18-10-2018 IPR005232 Pyridinium-3,5-bisthiocarboxylic acid mononucleotide synthase LarE GO:0016783 SHALO_2237 5d2bf1de9e04313b4f9b8a07bdfe4eac 260 Pfam PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB 43 242 4.4E-71 T 18-10-2018 IPR019288 Predicted 3'-5' exonuclease, PolB-like SHALO_2237 5d2bf1de9e04313b4f9b8a07bdfe4eac 260 Gene3D G3DSA:3.30.420.10 2 210 2.1E-21 T 18-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 SHALO_2237 5d2bf1de9e04313b4f9b8a07bdfe4eac 260 SUPERFAMILY SSF53098 2 219 5.48E-38 T 18-10-2018 IPR012337 Ribonuclease H-like superfamily SHALO_1203 03b54a3055f2c8cebd9c96252332f671 454 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 44 437 7.7E-89 T 18-10-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 SHALO_1203 03b54a3055f2c8cebd9c96252332f671 454 Gene3D G3DSA:3.40.50.12380 183 445 3.6E-86 T 18-10-2018 SHALO_1203 03b54a3055f2c8cebd9c96252332f671 454 Gene3D G3DSA:3.40.50.1980 31 182 3.4E-42 T 18-10-2018 SHALO_1203 03b54a3055f2c8cebd9c96252332f671 454 SUPERFAMILY SSF53807 14 446 8.1E-117 T 18-10-2018 SHALO_2131 9701e2364d323e8933b4c4ad24f9ba33 127 Pfam PF13359 DDE superfamily endonuclease 17 119 1.3E-10 T 18-10-2018 IPR027806 Harbinger transposase-derived nuclease domain SHALO_1482 9701e2364d323e8933b4c4ad24f9ba33 127 Pfam PF13359 DDE superfamily endonuclease 17 119 1.3E-10 T 18-10-2018 IPR027806 Harbinger transposase-derived nuclease domain SHALO_0819 1a3b3f9731c89e69be36c83a86d7f6b9 936 SUPERFAMILY SSF103515 631 934 1.07E-35 T 18-10-2018 IPR036709 Autotransporter beta-domain superfamily SHALO_0819 1a3b3f9731c89e69be36c83a86d7f6b9 936 Gene3D G3DSA:2.40.128.130 648 936 4.7E-44 T 18-10-2018 IPR036709 Autotransporter beta-domain superfamily SHALO_0819 1a3b3f9731c89e69be36c83a86d7f6b9 936 SMART SM00869 670 928 1.0E-29 T 18-10-2018 IPR005546 Autotransporter beta-domain SHALO_0819 1a3b3f9731c89e69be36c83a86d7f6b9 936 Pfam PF03797 Autotransporter beta-domain 674 917 7.7E-33 T 18-10-2018 IPR005546 Autotransporter beta-domain SHALO_0189 7e99054489c2adca959b3ef41481a724 330 Pfam PF00146 NADH dehydrogenase 13 325 7.8E-109 T 18-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0189 7e99054489c2adca959b3ef41481a724 330 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 6 330 22.602 T 18-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0189 7e99054489c2adca959b3ef41481a724 330 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 52 67 - T 18-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_2090 7ef0972d508f1df28a2ef097b0b601b1 328 SUPERFAMILY SSF51556 2 287 5.33E-33 T 18-10-2018 IPR032466 Metal-dependent hydrolase SHALO_2090 7ef0972d508f1df28a2ef097b0b601b1 328 Pfam PF04909 Amidohydrolase 4 280 2.0E-19 T 18-10-2018 IPR006680 Amidohydrolase-related GO:0016787 SHALO_1737 068a112110a8e5a038870cda8f0328c6 124 Gene3D G3DSA:1.10.1660.10 9 102 2.4E-23 T 18-10-2018 SHALO_1737 068a112110a8e5a038870cda8f0328c6 124 Pfam PF13411 MerR HTH family regulatory protein 10 77 4.6E-17 T 18-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SHALO_1737 068a112110a8e5a038870cda8f0328c6 124 SMART SM00422 10 79 5.9E-25 T 18-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SHALO_1737 068a112110a8e5a038870cda8f0328c6 124 SUPERFAMILY SSF46955 10 104 2.15E-18 T 18-10-2018 IPR009061 Putative DNA-binding domain superfamily SHALO_0445 a9e396ae87318de68da95616bf66e7fd 434 SUPERFAMILY SSF55073 38 178 8.63E-19 T 18-10-2018 IPR029787 Nucleotide cyclase SHALO_0445 a9e396ae87318de68da95616bf66e7fd 434 Pfam PF00563 EAL domain 208 428 4.2E-55 T 18-10-2018 IPR001633 EAL domain SHALO_0445 a9e396ae87318de68da95616bf66e7fd 434 SMART SM00267 22 182 3.1E-7 T 18-10-2018 IPR000160 GGDEF domain SHALO_0445 a9e396ae87318de68da95616bf66e7fd 434 Gene3D G3DSA:3.20.20.450 192 434 2.3E-61 T 18-10-2018 IPR035919 EAL domain superfamily SHALO_0445 a9e396ae87318de68da95616bf66e7fd 434 Gene3D G3DSA:3.30.70.270 19 180 6.6E-21 T 18-10-2018 SHALO_0445 a9e396ae87318de68da95616bf66e7fd 434 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 33 139 5.7E-14 T 18-10-2018 IPR000160 GGDEF domain SHALO_0445 a9e396ae87318de68da95616bf66e7fd 434 SUPERFAMILY SSF141868 209 431 6.02E-61 T 18-10-2018 IPR035919 EAL domain superfamily SHALO_0445 a9e396ae87318de68da95616bf66e7fd 434 Pfam PF00990 Diguanylate cyclase, GGDEF domain 34 173 4.1E-15 T 18-10-2018 IPR000160 GGDEF domain SHALO_0445 a9e396ae87318de68da95616bf66e7fd 434 SMART SM00052 193 433 9.5E-45 T 18-10-2018 IPR001633 EAL domain SHALO_2470 8071aad21b43c2dfb50eb73ed1ec74b7 128 Pfam PF00072 Response regulator receiver domain 5 122 2.1E-19 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_2470 8071aad21b43c2dfb50eb73ed1ec74b7 128 Gene3D G3DSA:3.40.50.2300 2 126 2.8E-25 T 18-10-2018 SHALO_2470 8071aad21b43c2dfb50eb73ed1ec74b7 128 SMART SM00448 3 122 6.0E-24 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_2470 8071aad21b43c2dfb50eb73ed1ec74b7 128 SUPERFAMILY SSF52172 3 127 5.12E-25 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_2061 2ca79dcec367e133ed2cfcd63b6c37f1 160 Pfam PF07603 Protein of unknown function (DUF1566) 32 160 1.3E-16 T 18-10-2018 IPR011460 Protein of unknown function DUF1566 SHALO_2922 6556aa17e1efe8de85e479beab0fa856 442 Gene3D G3DSA:3.20.20.70 136 425 6.4E-49 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_2922 6556aa17e1efe8de85e479beab0fa856 442 Pfam PF13186 Iron-sulfur cluster-binding domain 345 412 4.6E-10 T 18-10-2018 IPR023885 4Fe4S-binding SPASM domain SHALO_2922 6556aa17e1efe8de85e479beab0fa856 442 SUPERFAMILY SSF102114 135 412 2.75E-36 T 18-10-2018 SHALO_2922 6556aa17e1efe8de85e479beab0fa856 442 Pfam PF04055 Radical SAM superfamily 143 275 4.6E-11 T 18-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 SHALO_2922 6556aa17e1efe8de85e479beab0fa856 442 SUPERFAMILY SSF55729 2 98 7.02E-13 T 18-10-2018 IPR016181 Acyl-CoA N-acyltransferase SHALO_2922 6556aa17e1efe8de85e479beab0fa856 442 Pfam PF13394 4Fe-4S single cluster domain 148 245 3.3E-5 T 18-10-2018 SHALO_2922 6556aa17e1efe8de85e479beab0fa856 442 Gene3D G3DSA:3.40.630.30 1 111 2.2E-12 T 18-10-2018 SHALO_0718 b2efdfe9729d8d14afc501f09df390e5 138 SUPERFAMILY SSF103039 35 115 6.15E-9 T 18-10-2018 IPR028976 CheC-like superfamily SHALO_0718 b2efdfe9729d8d14afc501f09df390e5 138 Pfam PF13690 Chemotaxis phosphatase CheX 41 110 6.7E-8 T 18-10-2018 IPR028051 Chemotaxis phosphatase CheX-like domain SHALO_0718 b2efdfe9729d8d14afc501f09df390e5 138 Gene3D G3DSA:3.40.1550.10 1 136 1.1E-9 T 18-10-2018 IPR028976 CheC-like superfamily SHALO_1884 8bafa0407d8e47d3775364b6f4f69185 645 Pfam PF00884 Sulfatase 172 460 1.2E-21 T 18-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 SHALO_1884 8bafa0407d8e47d3775364b6f4f69185 645 Gene3D G3DSA:3.40.720.10 166 464 1.1E-41 T 18-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 SHALO_1884 8bafa0407d8e47d3775364b6f4f69185 645 SUPERFAMILY SSF53649 171 473 2.33E-30 T 18-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 SHALO_0274 23fe601228010d552f072fd55b155045 330 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 107 186 1.6E-30 T 18-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 SHALO_0274 23fe601228010d552f072fd55b155045 330 SUPERFAMILY SSF53901 7 327 6.89E-64 T 18-10-2018 IPR016039 Thiolase-like GO:0003824 SHALO_0274 23fe601228010d552f072fd55b155045 330 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 238 326 6.6E-35 T 18-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 SHALO_0274 23fe601228010d552f072fd55b155045 330 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 2 327 7.6E-139 T 18-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 SHALO_0274 23fe601228010d552f072fd55b155045 330 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 327 69.557 T 18-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 SHALO_0274 23fe601228010d552f072fd55b155045 330 Gene3D G3DSA:3.40.47.10 1 330 3.6E-127 T 18-10-2018 IPR016039 Thiolase-like GO:0003824 SHALO_0106 cb46f8b9c3a2d09dfcf3df567cad0a17 666 Pfam PF00753 Metallo-beta-lactamase superfamily 127 277 9.9E-12 T 18-10-2018 IPR001279 Metallo-beta-lactamase SHALO_0106 cb46f8b9c3a2d09dfcf3df567cad0a17 666 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 118 663 1.3E-191 T 18-10-2018 IPR004613 Ribonuclease J GO:0003723|GO:0046872 SHALO_0106 cb46f8b9c3a2d09dfcf3df567cad0a17 666 Hamap MF_01491 Ribonuclease J [rnj]. 113 666 41.623 T 18-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 SHALO_0106 cb46f8b9c3a2d09dfcf3df567cad0a17 666 Gene3D G3DSA:3.40.50.10710 318 476 3.7E-168 T 18-10-2018 SHALO_0106 cb46f8b9c3a2d09dfcf3df567cad0a17 666 SMART SM00849 130 326 6.9E-18 T 18-10-2018 IPR001279 Metallo-beta-lactamase SHALO_0106 cb46f8b9c3a2d09dfcf3df567cad0a17 666 Gene3D G3DSA:3.60.15.10 119 547 3.7E-168 T 18-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like SHALO_0106 cb46f8b9c3a2d09dfcf3df567cad0a17 666 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 469 519 4.4E-10 T 18-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain SHALO_0106 cb46f8b9c3a2d09dfcf3df567cad0a17 666 SUPERFAMILY SSF56281 118 534 1.26E-85 T 18-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like SHALO_0106 cb46f8b9c3a2d09dfcf3df567cad0a17 666 Gene3D G3DSA:3.10.20.580 560 666 1.2E-17 T 18-10-2018 SHALO_2952 4317a11efbc8016f7454558ef91c062b 381 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 3 375 2.5E-139 T 18-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 SHALO_2952 4317a11efbc8016f7454558ef91c062b 381 Pfam PF02595 Glycerate kinase family 3 374 3.4E-136 T 18-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 SHALO_2952 4317a11efbc8016f7454558ef91c062b 381 Gene3D G3DSA:3.90.1510.10 42 276 1.2E-131 T 18-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 SHALO_2952 4317a11efbc8016f7454558ef91c062b 381 Gene3D G3DSA:3.40.50.10350 3 355 1.2E-131 T 18-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold SHALO_2952 4317a11efbc8016f7454558ef91c062b 381 SUPERFAMILY SSF110738 1 375 6.54E-117 T 18-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 SHALO_2952 4317a11efbc8016f7454558ef91c062b 381 PIRSF PIRSF006078 1 378 2.7E-133 T 18-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 SHALO_2464 6cbf859a4f3d916662cc3a49df13be66 303 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 164 276 5.2E-15 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_2464 6cbf859a4f3d916662cc3a49df13be66 303 Gene3D G3DSA:3.30.565.10 116 271 1.1E-30 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_2464 6cbf859a4f3d916662cc3a49df13be66 303 Gene3D G3DSA:1.10.287.130 65 115 1.1E-30 T 18-10-2018 SHALO_2464 6cbf859a4f3d916662cc3a49df13be66 303 SMART SM00387 163 277 3.8E-15 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_2464 6cbf859a4f3d916662cc3a49df13be66 303 SUPERFAMILY SSF55874 107 275 3.01E-27 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_0999 eea5467ef627304dba4f6ee158853dbe 313 Gene3D G3DSA:3.40.190.10 27 310 2.3E-98 T 18-10-2018 SHALO_0999 eea5467ef627304dba4f6ee158853dbe 313 Gene3D G3DSA:3.40.190.10 111 247 2.3E-98 T 18-10-2018 SHALO_0999 eea5467ef627304dba4f6ee158853dbe 313 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 1 310 5.3E-110 T 18-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family SHALO_0999 eea5467ef627304dba4f6ee158853dbe 313 SUPERFAMILY SSF53850 22 312 2.48E-75 T 18-10-2018 SHALO_0999 eea5467ef627304dba4f6ee158853dbe 313 Pfam PF16868 NMT1-like family 27 310 5.9E-95 T 18-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family SHALO_2052 79a8de81391d5866f36d0e74e3cf8336 650 SUPERFAMILY SSF51445 39 306 1.58E-48 T 18-10-2018 IPR017853 Glycoside hydrolase superfamily SHALO_2052 79a8de81391d5866f36d0e74e3cf8336 650 Gene3D G3DSA:3.20.20.80 48 319 6.8E-13 T 18-10-2018 SHALO_2350 59ee6e51da57ade50eb62fe7025c5617 187 Pfam PF02525 Flavodoxin-like fold 2 170 2.5E-43 T 18-10-2018 IPR003680 Flavodoxin-like fold SHALO_2350 59ee6e51da57ade50eb62fe7025c5617 187 SUPERFAMILY SSF52218 1 174 3.56E-44 T 18-10-2018 IPR029039 Flavoprotein-like superfamily SHALO_2350 59ee6e51da57ade50eb62fe7025c5617 187 Gene3D G3DSA:3.40.50.360 2 180 4.1E-55 T 18-10-2018 IPR029039 Flavoprotein-like superfamily SHALO_1801 865d208cf50bd5b923f467962c833493 98 Pfam PF01883 Iron-sulfur cluster assembly protein 4 77 2.6E-19 T 18-10-2018 IPR002744 MIP18 family-like SHALO_1801 865d208cf50bd5b923f467962c833493 98 Gene3D G3DSA:3.30.300.130 1 97 1.5E-29 T 18-10-2018 IPR034904 Fe-S cluster assembly domain superfamily SHALO_1801 865d208cf50bd5b923f467962c833493 98 SUPERFAMILY SSF117916 1 95 6.21E-28 T 18-10-2018 IPR034904 Fe-S cluster assembly domain superfamily SHALO_2104 7a581232f87b4c3671fc4292e819ded8 349 SUPERFAMILY SSF109604 141 326 3.45E-41 T 18-10-2018 SHALO_2104 7a581232f87b4c3671fc4292e819ded8 349 Pfam PF00072 Response regulator receiver domain 4 115 7.6E-26 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_2104 7a581232f87b4c3671fc4292e819ded8 349 SMART SM00448 2 115 3.9E-36 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_2104 7a581232f87b4c3671fc4292e819ded8 349 Gene3D G3DSA:1.10.3210.10 136 338 1.4E-74 T 18-10-2018 SHALO_2104 7a581232f87b4c3671fc4292e819ded8 349 Gene3D G3DSA:3.40.50.2300 1 135 6.1E-36 T 18-10-2018 SHALO_2104 7a581232f87b4c3671fc4292e819ded8 349 Pfam PF01966 HD domain 162 284 6.2E-16 T 18-10-2018 IPR006674 HD domain SHALO_2104 7a581232f87b4c3671fc4292e819ded8 349 SUPERFAMILY SSF52172 2 137 1.24E-37 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_2104 7a581232f87b4c3671fc4292e819ded8 349 SMART SM00471 157 294 1.1E-9 T 18-10-2018 IPR003607 HD/PDEase domain SHALO_2312 7213d8d54d564c17dd8a2d032b17584a 465 Pfam PF00654 Voltage gated chloride channel 62 400 3.6E-73 T 18-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 SHALO_2312 7213d8d54d564c17dd8a2d032b17584a 465 PRINTS PR00762 Chloride channel signature 103 122 4.9E-20 T 18-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 SHALO_2312 7213d8d54d564c17dd8a2d032b17584a 465 PRINTS PR00762 Chloride channel signature 323 343 4.9E-20 T 18-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 SHALO_2312 7213d8d54d564c17dd8a2d032b17584a 465 PRINTS PR00762 Chloride channel signature 351 367 4.9E-20 T 18-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 SHALO_2312 7213d8d54d564c17dd8a2d032b17584a 465 PRINTS PR00762 Chloride channel signature 154 173 4.9E-20 T 18-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 SHALO_2312 7213d8d54d564c17dd8a2d032b17584a 465 Gene3D G3DSA:1.10.3080.10 5 417 5.2E-70 T 18-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 SHALO_2312 7213d8d54d564c17dd8a2d032b17584a 465 SUPERFAMILY SSF81340 5 409 8.11E-82 T 18-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 SHALO_2726 2b4b39f86984fe593a3b6afa5ffc2546 608 SMART SM00490 262 343 2.1E-29 T 18-10-2018 IPR001650 Helicase, C-terminal SHALO_2726 2b4b39f86984fe593a3b6afa5ffc2546 608 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 156 164 - T 18-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site SHALO_2726 2b4b39f86984fe593a3b6afa5ffc2546 608 Gene3D G3DSA:3.40.50.300 217 447 2.6E-52 T 18-10-2018 SHALO_2726 2b4b39f86984fe593a3b6afa5ffc2546 608 SMART SM00487 28 226 1.6E-59 T 18-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain SHALO_2726 2b4b39f86984fe593a3b6afa5ffc2546 608 Pfam PF00270 DEAD/DEAH box helicase 34 199 1.3E-42 T 18-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SHALO_2726 2b4b39f86984fe593a3b6afa5ffc2546 608 Gene3D G3DSA:3.40.50.300 1 213 1.5E-69 T 18-10-2018 SHALO_2726 2b4b39f86984fe593a3b6afa5ffc2546 608 SUPERFAMILY SSF52540 76 361 1.6E-74 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_2726 2b4b39f86984fe593a3b6afa5ffc2546 608 Pfam PF00271 Helicase conserved C-terminal domain 237 343 1.5E-29 T 18-10-2018 IPR001650 Helicase, C-terminal SHALO_2163 07233ba6220485a850b2759e63b5dadc 232 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 29 223 2.3E-19 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 SHALO_2163 07233ba6220485a850b2759e63b5dadc 232 Gene3D G3DSA:1.10.3720.10 3 227 2.2E-45 T 18-10-2018 IPR035906 MetI-like superfamily SHALO_2163 07233ba6220485a850b2759e63b5dadc 232 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 15 222 1.4E-65 T 18-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 SHALO_2163 07233ba6220485a850b2759e63b5dadc 232 SUPERFAMILY SSF161098 10 220 2.35E-42 T 18-10-2018 IPR035906 MetI-like superfamily SHALO_0915 f7c9e589fdcb2fa7f74cf508b30e164c 587 SUPERFAMILY SSF51905 68 584 1.57E-39 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SHALO_0915 f7c9e589fdcb2fa7f74cf508b30e164c 587 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 516 531 4.2E-6 T 18-10-2018 SHALO_0915 f7c9e589fdcb2fa7f74cf508b30e164c 587 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 76 98 4.2E-6 T 18-10-2018 SHALO_0915 f7c9e589fdcb2fa7f74cf508b30e164c 587 SUPERFAMILY SSF56425 354 518 3.14E-20 T 18-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_0915 f7c9e589fdcb2fa7f74cf508b30e164c 587 Gene3D G3DSA:3.90.700.10 346 510 6.5E-86 T 18-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_0915 f7c9e589fdcb2fa7f74cf508b30e164c 587 Pfam PF00890 FAD binding domain 76 553 6.0E-44 T 18-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_0915 f7c9e589fdcb2fa7f74cf508b30e164c 587 Gene3D G3DSA:3.50.50.60 75 575 6.5E-86 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SHALO_2891 5b044d22fb677bbe69aa3d77082bc1d1 247 Pfam PF03741 Integral membrane protein TerC family 15 205 1.1E-51 T 18-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 SHALO_1016 f68ee2b048af219ca45baee385e0d578 350 SUPERFAMILY SSF52540 74 294 2.93E-36 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_1016 f68ee2b048af219ca45baee385e0d578 350 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 102 120 3.4E-5 T 18-10-2018 IPR001270 ClpA/B family GO:0005524 SHALO_1016 f68ee2b048af219ca45baee385e0d578 350 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 200 214 3.4E-5 T 18-10-2018 IPR001270 ClpA/B family GO:0005524 SHALO_1016 f68ee2b048af219ca45baee385e0d578 350 SMART SM00382 98 234 1.3E-13 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_1016 f68ee2b048af219ca45baee385e0d578 350 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 103 231 2.7E-27 T 18-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 SHALO_1016 f68ee2b048af219ca45baee385e0d578 350 Gene3D G3DSA:3.40.50.300 57 244 1.2E-34 T 18-10-2018 SHALO_1846 ba60fce4b5db80dbcc7a1a00b18288fa 193 PIRSF PIRSF000709 2 192 8.5E-21 T 18-10-2018 SHALO_1846 ba60fce4b5db80dbcc7a1a00b18288fa 193 SMART SM00855 4 153 1.4E-19 T 18-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 SHALO_1846 ba60fce4b5db80dbcc7a1a00b18288fa 193 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 187 6.6E-51 T 18-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 SHALO_1846 ba60fce4b5db80dbcc7a1a00b18288fa 193 Gene3D G3DSA:3.40.50.1240 3 192 2.3E-51 T 18-10-2018 IPR029033 Histidine phosphatase superfamily SHALO_1846 ba60fce4b5db80dbcc7a1a00b18288fa 193 SUPERFAMILY SSF53254 4 188 6.15E-52 T 18-10-2018 IPR029033 Histidine phosphatase superfamily SHALO_2631 9adce376286471b2bc945c3abb64a575 176 Pfam PF02525 Flavodoxin-like fold 2 171 9.1E-40 T 18-10-2018 IPR003680 Flavodoxin-like fold SHALO_2631 9adce376286471b2bc945c3abb64a575 176 SUPERFAMILY SSF52218 1 176 3.35E-43 T 18-10-2018 IPR029039 Flavoprotein-like superfamily SHALO_2631 9adce376286471b2bc945c3abb64a575 176 Gene3D G3DSA:3.40.50.360 1 176 1.1E-52 T 18-10-2018 IPR029039 Flavoprotein-like superfamily SHALO_2362 07b6e6d1cb9b4a1b5bfa211ba0fcbea2 498 Gene3D G3DSA:1.10.287.950 167 498 1.4E-54 T 18-10-2018 SHALO_2362 07b6e6d1cb9b4a1b5bfa211ba0fcbea2 498 SUPERFAMILY SSF58104 188 497 1.22E-55 T 18-10-2018 SHALO_2362 07b6e6d1cb9b4a1b5bfa211ba0fcbea2 498 SMART SM00283 228 496 1.1E-42 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_2362 07b6e6d1cb9b4a1b5bfa211ba0fcbea2 498 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 314 462 9.7E-35 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_1341 c9e598bb82910d6c763138079d526191 474 SUPERFAMILY SSF56954 2 463 4.84E-106 T 18-10-2018 SHALO_1341 c9e598bb82910d6c763138079d526191 474 Gene3D G3DSA:2.20.200.10 96 350 1.6E-122 T 18-10-2018 SHALO_1341 c9e598bb82910d6c763138079d526191 474 Pfam PF02321 Outer membrane efflux protein 61 248 1.0E-26 T 18-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 SHALO_1341 c9e598bb82910d6c763138079d526191 474 Pfam PF02321 Outer membrane efflux protein 275 458 4.1E-27 T 18-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 SHALO_1341 c9e598bb82910d6c763138079d526191 474 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 10 461 1.3E-110 T 18-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 SHALO_1341 c9e598bb82910d6c763138079d526191 474 Gene3D G3DSA:1.20.1600.10 50 462 1.6E-122 T 18-10-2018 SHALO_0164 6042a649cb369b39090da8eb44ca9ad6 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 219 5.1E-15 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_0164 6042a649cb369b39090da8eb44ca9ad6 221 Gene3D G3DSA:1.10.10.10 128 221 1.3E-20 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_0164 6042a649cb369b39090da8eb44ca9ad6 221 SMART SM00448 3 114 1.2E-34 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_0164 6042a649cb369b39090da8eb44ca9ad6 221 SUPERFAMILY SSF52172 3 176 4.41E-36 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_0164 6042a649cb369b39090da8eb44ca9ad6 221 Pfam PF00072 Response regulator receiver domain 5 114 1.5E-25 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_0164 6042a649cb369b39090da8eb44ca9ad6 221 SMART SM00862 148 219 5.4E-15 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_0164 6042a649cb369b39090da8eb44ca9ad6 221 Gene3D G3DSA:3.40.50.2300 1 125 1.6E-34 T 18-10-2018 SHALO_1526 c7e940cb5c3fd3437f7051b82799c328 242 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 5 208 1.4E-38 T 18-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 SHALO_1526 c7e940cb5c3fd3437f7051b82799c328 242 Gene3D G3DSA:3.30.950.10 112 239 9.3E-53 T 18-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 SHALO_1526 c7e940cb5c3fd3437f7051b82799c328 242 Gene3D G3DSA:3.40.1010.10 1 111 1.8E-29 T 18-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 SHALO_1526 c7e940cb5c3fd3437f7051b82799c328 242 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 76 109 - T 18-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 SHALO_1526 c7e940cb5c3fd3437f7051b82799c328 242 TIGRFAM TIGR01466 cobJ_cbiH: precorrin-3B C17-methyltransferase 5 240 1.8E-90 T 18-10-2018 IPR006363 Precorrin-3B C17-methyltransferase domain GO:0008168|GO:0009236 SHALO_1526 c7e940cb5c3fd3437f7051b82799c328 242 SUPERFAMILY SSF53790 2 241 2.75E-57 T 18-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 SHALO_1511 fe8446952aab0b3adcd136fd73242ad4 344 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 17 340 7.4E-108 T 18-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 SHALO_1511 fe8446952aab0b3adcd136fd73242ad4 344 SUPERFAMILY SSF52733 6 337 7.85E-97 T 18-10-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 SHALO_1511 fe8446952aab0b3adcd136fd73242ad4 344 Pfam PF02277 Phosphoribosyltransferase 12 338 2.2E-110 T 18-10-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 SHALO_1511 fe8446952aab0b3adcd136fd73242ad4 344 Gene3D G3DSA:1.10.1610.10 14 335 2.2E-114 T 18-10-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 SHALO_1511 fe8446952aab0b3adcd136fd73242ad4 344 Gene3D G3DSA:3.40.50.10210 56 329 2.2E-114 T 18-10-2018 SHALO_3013 c24065d9d69ec8c63868ccb4d40d5631 185 Gene3D G3DSA:1.20.1440.20 13 180 4.9E-54 T 18-10-2018 IPR023353 LemA-like domain superfamily SHALO_3013 c24065d9d69ec8c63868ccb4d40d5631 185 Pfam PF04011 LemA family 7 180 4.7E-60 T 18-10-2018 IPR007156 LemA SHALO_3013 c24065d9d69ec8c63868ccb4d40d5631 185 SUPERFAMILY SSF140478 22 170 3.14E-47 T 18-10-2018 IPR023353 LemA-like domain superfamily SHALO_1515 7f42523a49fbd4ca8284beae0eafdb37 300 Gene3D G3DSA:3.40.50.1400 140 262 1.1E-97 T 18-10-2018 SHALO_1515 7f42523a49fbd4ca8284beae0eafdb37 300 SUPERFAMILY SSF53800 28 282 1.11E-78 T 18-10-2018 SHALO_1515 7f42523a49fbd4ca8284beae0eafdb37 300 Gene3D G3DSA:3.40.50.1400 29 281 1.1E-97 T 18-10-2018 SHALO_1515 7f42523a49fbd4ca8284beae0eafdb37 300 PIRSF PIRSF033579 27 294 2.2E-100 T 18-10-2018 IPR010388 Anaerobic cobalt chelatase GO:0016852|GO:0019251 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 SHALO_1515 7f42523a49fbd4ca8284beae0eafdb37 300 Pfam PF06180 Cobalt chelatase (CbiK) 29 282 1.0E-94 T 18-10-2018 IPR010388 Anaerobic cobalt chelatase GO:0016852|GO:0019251 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 SHALO_2178 85c5493c3a34371394da498ec2957bac 145 SUPERFAMILY SSF55961 4 138 4.62E-19 T 18-10-2018 SHALO_2178 85c5493c3a34371394da498ec2957bac 145 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 13 130 2.6E-7 T 18-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 SHALO_2178 85c5493c3a34371394da498ec2957bac 145 Gene3D G3DSA:3.30.530.20 4 144 1.5E-13 T 18-10-2018 IPR023393 START-like domain superfamily SHALO_0319 413d60fe5fff7217cb5411523aaa25fd 305 Gene3D G3DSA:3.90.1640.10 1 187 2.0E-63 T 18-10-2018 SHALO_0319 413d60fe5fff7217cb5411523aaa25fd 305 Gene3D G3DSA:3.10.310.20 189 305 4.3E-34 T 18-10-2018 IPR038222 DHHA2 domain superfamily KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 SHALO_0319 413d60fe5fff7217cb5411523aaa25fd 305 Pfam PF01368 DHH family 3 143 5.8E-20 T 18-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 SHALO_0319 413d60fe5fff7217cb5411523aaa25fd 305 SUPERFAMILY SSF64182 3 305 8.89E-68 T 18-10-2018 IPR038763 DHH phosphoesterase superfamily SHALO_0319 413d60fe5fff7217cb5411523aaa25fd 305 Pfam PF02833 DHHA2 domain 180 302 2.2E-20 T 18-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 SHALO_0319 413d60fe5fff7217cb5411523aaa25fd 305 SMART SM01131 179 305 6.3E-50 T 18-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 SHALO_2308 0909f7bf8d92112e766871e44a814454 282 Pfam PF01609 Transposase DDE domain 99 267 3.4E-15 T 18-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 SHALO_2374 0909f7bf8d92112e766871e44a814454 282 Pfam PF01609 Transposase DDE domain 99 267 3.4E-15 T 18-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 SHALO_1142 3cc3fcc36656cbc08d5044c05651bba8 451 SUPERFAMILY SSF52540 68 288 5.89E-50 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_1142 3cc3fcc36656cbc08d5044c05651bba8 451 Pfam PF13481 AAA domain 69 222 5.2E-13 T 18-10-2018 SHALO_1142 3cc3fcc36656cbc08d5044c05651bba8 451 SUPERFAMILY SSF54211 255 450 5.69E-33 T 18-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold SHALO_1142 3cc3fcc36656cbc08d5044c05651bba8 451 Pfam PF13541 Subunit ChlI of Mg-chelatase 346 427 4.4E-8 T 18-10-2018 SHALO_1142 3cc3fcc36656cbc08d5044c05651bba8 451 Gene3D G3DSA:3.30.230.10 324 451 1.7E-15 T 18-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SHALO_1142 3cc3fcc36656cbc08d5044c05651bba8 451 SMART SM00382 90 244 5.4E-14 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_1142 3cc3fcc36656cbc08d5044c05651bba8 451 Hamap MF_01498 DNA repair protein RadA [radA]. 21 449 41.586 T 18-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 SHALO_1142 3cc3fcc36656cbc08d5044c05651bba8 451 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 447 1.4E-184 T 18-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 SHALO_1142 3cc3fcc36656cbc08d5044c05651bba8 451 PRINTS PR01874 DNA repair protein radA signature 213 241 2.6E-88 T 18-10-2018 SHALO_1142 3cc3fcc36656cbc08d5044c05651bba8 451 PRINTS PR01874 DNA repair protein radA signature 124 141 2.6E-88 T 18-10-2018 SHALO_1142 3cc3fcc36656cbc08d5044c05651bba8 451 PRINTS PR01874 DNA repair protein radA signature 248 274 2.6E-88 T 18-10-2018 SHALO_1142 3cc3fcc36656cbc08d5044c05651bba8 451 PRINTS PR01874 DNA repair protein radA signature 321 344 2.6E-88 T 18-10-2018 SHALO_1142 3cc3fcc36656cbc08d5044c05651bba8 451 PRINTS PR01874 DNA repair protein radA signature 82 110 2.6E-88 T 18-10-2018 SHALO_1142 3cc3fcc36656cbc08d5044c05651bba8 451 PRINTS PR01874 DNA repair protein radA signature 10 34 2.6E-88 T 18-10-2018 SHALO_1142 3cc3fcc36656cbc08d5044c05651bba8 451 PRINTS PR01874 DNA repair protein radA signature 174 198 2.6E-88 T 18-10-2018 SHALO_1142 3cc3fcc36656cbc08d5044c05651bba8 451 Gene3D G3DSA:3.40.50.300 66 284 2.8E-42 T 18-10-2018 SHALO_1617 8ec3f06b6c8f4120a4476d642f94d8c4 160 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 11 153 1.0E-4 T 18-10-2018 SHALO_1617 8ec3f06b6c8f4120a4476d642f94d8c4 160 Gene3D G3DSA:3.40.50.620 1 159 4.0E-54 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_1617 8ec3f06b6c8f4120a4476d642f94d8c4 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 112 134 4.1E-46 T 18-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 SHALO_1617 8ec3f06b6c8f4120a4476d642f94d8c4 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 20 41 4.1E-46 T 18-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 SHALO_1617 8ec3f06b6c8f4120a4476d642f94d8c4 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 49 73 4.1E-46 T 18-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 SHALO_1617 8ec3f06b6c8f4120a4476d642f94d8c4 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 2 20 4.1E-46 T 18-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 SHALO_1617 8ec3f06b6c8f4120a4476d642f94d8c4 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 85 101 4.1E-46 T 18-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 SHALO_1617 8ec3f06b6c8f4120a4476d642f94d8c4 160 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 2 158 33.984 T 18-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 SHALO_1617 8ec3f06b6c8f4120a4476d642f94d8c4 160 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 60 9.1E-18 T 18-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SHALO_1617 8ec3f06b6c8f4120a4476d642f94d8c4 160 SUPERFAMILY SSF52374 1 154 4.56E-44 T 18-10-2018 SHALO_1617 8ec3f06b6c8f4120a4476d642f94d8c4 160 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 3 156 8.5E-60 T 18-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 SHALO_1617 8ec3f06b6c8f4120a4476d642f94d8c4 160 Pfam PF01467 Cytidylyltransferase-like 5 133 1.9E-21 T 18-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SHALO_1091 94b0518ad698223a79148a934f135099 178 Pfam PF06821 Serine hydrolase 5 173 2.8E-60 T 18-10-2018 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 SHALO_1091 94b0518ad698223a79148a934f135099 178 Gene3D G3DSA:3.40.50.1820 1 177 7.1E-51 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold SHALO_1091 94b0518ad698223a79148a934f135099 178 SUPERFAMILY SSF53474 5 170 8.56E-30 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold SHALO_1514 8a7ce55376949f4932a3dfb64d2d00a4 213 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 7 16 - T 18-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 SHALO_1514 8a7ce55376949f4932a3dfb64d2d00a4 213 SMART SM00855 4 157 2.9E-11 T 18-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 SHALO_1514 8a7ce55376949f4932a3dfb64d2d00a4 213 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 191 1.0E-49 T 18-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 SHALO_1514 8a7ce55376949f4932a3dfb64d2d00a4 213 Gene3D G3DSA:3.40.50.1240 2 209 2.1E-51 T 18-10-2018 IPR029033 Histidine phosphatase superfamily SHALO_1514 8a7ce55376949f4932a3dfb64d2d00a4 213 PIRSF PIRSF000709 1 186 2.6E-12 T 18-10-2018 SHALO_1514 8a7ce55376949f4932a3dfb64d2d00a4 213 SUPERFAMILY SSF53254 1 196 1.84E-49 T 18-10-2018 IPR029033 Histidine phosphatase superfamily SHALO_0608 dc022e6d7b2d0e4a65e146223beb8149 446 Pfam PF02447 GntP family permease 1 444 3.4E-98 T 18-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 SHALO_0608 dc022e6d7b2d0e4a65e146223beb8149 446 PIRSF PIRSF002746 1 446 4.9E-117 T 18-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 SHALO_2113 30035bd2c84bb61c08b54b2288aa36a1 841 Pfam PF01966 HD domain 457 566 6.9E-9 T 18-10-2018 IPR006674 HD domain SHALO_2113 30035bd2c84bb61c08b54b2288aa36a1 841 SUPERFAMILY SSF109604 423 595 3.35E-11 T 18-10-2018 SHALO_2113 30035bd2c84bb61c08b54b2288aa36a1 841 PIRSF PIRSF006288 749 832 7.1E-6 T 18-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 SHALO_2113 30035bd2c84bb61c08b54b2288aa36a1 841 PIRSF PIRSF006288 11 692 3.5E-123 T 18-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 SHALO_2113 30035bd2c84bb61c08b54b2288aa36a1 841 Pfam PF08335 GlnD PII-uridylyltransferase 197 321 1.3E-18 T 18-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 SHALO_2113 30035bd2c84bb61c08b54b2288aa36a1 841 SUPERFAMILY SSF81301 61 185 4.16E-16 T 18-10-2018 SHALO_2113 30035bd2c84bb61c08b54b2288aa36a1 841 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 841 73.62 T 18-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 SHALO_2113 30035bd2c84bb61c08b54b2288aa36a1 841 Gene3D G3DSA:1.10.3210.10 424 603 5.0E-7 T 18-10-2018 SHALO_1635 38e6efc204e20f24b3b56551613ffe63 283 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 11 281 4.4E-90 T 18-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 SHALO_1635 38e6efc204e20f24b3b56551613ffe63 283 Pfam PF05681 Fumarate hydratase (Fumerase) 11 281 5.4E-102 T 18-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 SHALO_2584 11c0432002e73930ba3200311d8baf51 328 Gene3D G3DSA:3.40.50.300 5 248 1.4E-78 T 18-10-2018 SHALO_2584 11c0432002e73930ba3200311d8baf51 328 SUPERFAMILY SSF52540 7 233 5.57E-77 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_2584 11c0432002e73930ba3200311d8baf51 328 Pfam PF00005 ABC transporter 23 171 2.5E-39 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_2584 11c0432002e73930ba3200311d8baf51 328 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_2584 11c0432002e73930ba3200311d8baf51 328 SMART SM00382 32 220 1.8E-16 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_0802 89372c25563faf79918c8d1972e7976b 569 SUPERFAMILY SSF50249 215 301 1.03E-21 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold SHALO_0802 89372c25563faf79918c8d1972e7976b 569 PRINTS PR00681 Ribosomal protein S1 signature 65 79 5.7E-36 T 18-10-2018 SHALO_0802 89372c25563faf79918c8d1972e7976b 569 PRINTS PR00681 Ribosomal protein S1 signature 134 150 5.7E-36 T 18-10-2018 SHALO_0802 89372c25563faf79918c8d1972e7976b 569 PRINTS PR00681 Ribosomal protein S1 signature 314 333 5.7E-36 T 18-10-2018 SHALO_0802 89372c25563faf79918c8d1972e7976b 569 PRINTS PR00681 Ribosomal protein S1 signature 179 199 5.7E-36 T 18-10-2018 SHALO_0802 89372c25563faf79918c8d1972e7976b 569 PRINTS PR00681 Ribosomal protein S1 signature 236 257 5.7E-36 T 18-10-2018 SHALO_0802 89372c25563faf79918c8d1972e7976b 569 PRINTS PR00681 Ribosomal protein S1 signature 47 65 5.7E-36 T 18-10-2018 SHALO_0802 89372c25563faf79918c8d1972e7976b 569 PRINTS PR00681 Ribosomal protein S1 signature 354 372 5.7E-36 T 18-10-2018 SHALO_0802 89372c25563faf79918c8d1972e7976b 569 Pfam PF00575 S1 RNA binding domain 216 284 9.6E-17 T 18-10-2018 IPR003029 S1 domain GO:0003676 SHALO_0802 89372c25563faf79918c8d1972e7976b 569 Pfam PF00575 S1 RNA binding domain 384 456 5.7E-18 T 18-10-2018 IPR003029 S1 domain GO:0003676 SHALO_0802 89372c25563faf79918c8d1972e7976b 569 Pfam PF00575 S1 RNA binding domain 47 109 8.3E-6 T 18-10-2018 IPR003029 S1 domain GO:0003676 SHALO_0802 89372c25563faf79918c8d1972e7976b 569 Pfam PF00575 S1 RNA binding domain 131 195 1.2E-5 T 18-10-2018 IPR003029 S1 domain GO:0003676 SHALO_0802 89372c25563faf79918c8d1972e7976b 569 Pfam PF00575 S1 RNA binding domain 298 371 1.4E-19 T 18-10-2018 IPR003029 S1 domain GO:0003676 SHALO_0802 89372c25563faf79918c8d1972e7976b 569 Pfam PF00575 S1 RNA binding domain 470 538 1.6E-12 T 18-10-2018 IPR003029 S1 domain GO:0003676 SHALO_0802 89372c25563faf79918c8d1972e7976b 569 SUPERFAMILY SSF50249 284 376 3.66E-23 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold SHALO_0802 89372c25563faf79918c8d1972e7976b 569 Gene3D G3DSA:2.40.50.140 294 382 2.6E-27 T 18-10-2018 SHALO_0802 89372c25563faf79918c8d1972e7976b 569 Gene3D G3DSA:2.40.50.140 208 293 4.3E-21 T 18-10-2018 SHALO_0802 89372c25563faf79918c8d1972e7976b 569 SMART SM00316 214 284 9.4E-19 T 18-10-2018 IPR022967 RNA-binding domain, S1 SHALO_0802 89372c25563faf79918c8d1972e7976b 569 SMART SM00316 386 456 6.8E-23 T 18-10-2018 IPR022967 RNA-binding domain, S1 SHALO_0802 89372c25563faf79918c8d1972e7976b 569 SMART SM00316 471 538 6.3E-18 T 18-10-2018 IPR022967 RNA-binding domain, S1 SHALO_0802 89372c25563faf79918c8d1972e7976b 569 SMART SM00316 45 111 8.7E-6 T 18-10-2018 IPR022967 RNA-binding domain, S1 SHALO_0802 89372c25563faf79918c8d1972e7976b 569 SMART SM00316 128 195 0.0011 T 18-10-2018 IPR022967 RNA-binding domain, S1 SHALO_0802 89372c25563faf79918c8d1972e7976b 569 SMART SM00316 299 371 1.6E-24 T 18-10-2018 IPR022967 RNA-binding domain, S1 SHALO_0802 89372c25563faf79918c8d1972e7976b 569 Gene3D G3DSA:2.40.50.140 470 546 8.3E-17 T 18-10-2018 SHALO_0802 89372c25563faf79918c8d1972e7976b 569 SUPERFAMILY SSF50249 385 468 2.76E-22 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold SHALO_0802 89372c25563faf79918c8d1972e7976b 569 SUPERFAMILY SSF50249 456 562 9.29E-17 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold SHALO_0802 89372c25563faf79918c8d1972e7976b 569 Gene3D G3DSA:2.40.50.140 383 466 1.3E-24 T 18-10-2018 SHALO_0802 89372c25563faf79918c8d1972e7976b 569 SUPERFAMILY SSF50249 40 128 2.13E-10 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold SHALO_0802 89372c25563faf79918c8d1972e7976b 569 SUPERFAMILY SSF50249 133 207 5.56E-9 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold SHALO_0802 89372c25563faf79918c8d1972e7976b 569 Gene3D G3DSA:2.40.50.140 121 207 3.5E-5 T 18-10-2018 SHALO_0802 89372c25563faf79918c8d1972e7976b 569 Gene3D G3DSA:2.40.50.140 31 120 4.9E-11 T 18-10-2018 SHALO_1322 efb8db3232d43d91c3c7569074f1d840 90 Pfam PF01381 Helix-turn-helix 26 80 8.2E-10 T 18-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SHALO_1322 efb8db3232d43d91c3c7569074f1d840 90 SUPERFAMILY SSF47413 15 82 1.9E-10 T 18-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 SHALO_1322 efb8db3232d43d91c3c7569074f1d840 90 SMART SM00530 22 80 9.2E-5 T 18-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SHALO_1322 efb8db3232d43d91c3c7569074f1d840 90 Gene3D G3DSA:1.10.260.40 9 83 2.9E-12 T 18-10-2018 SHALO_2249 26342443d0fc7e945d5e6c3c3f85a8da 219 Gene3D G3DSA:1.25.40.10 7 194 1.2E-20 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SHALO_2249 26342443d0fc7e945d5e6c3c3f85a8da 219 SMART SM00028 95 128 11.0 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_2249 26342443d0fc7e945d5e6c3c3f85a8da 219 SMART SM00028 33 66 12.0 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_2249 26342443d0fc7e945d5e6c3c3f85a8da 219 SMART SM00028 129 162 200.0 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_2249 26342443d0fc7e945d5e6c3c3f85a8da 219 Pfam PF13181 Tetratricopeptide repeat 36 66 0.022 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_2249 26342443d0fc7e945d5e6c3c3f85a8da 219 SUPERFAMILY SSF48452 11 208 7.59E-13 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SHALO_3015 d643a73884078d8f79460c809aff3006 513 Gene3D G3DSA:3.30.750.140 380 488 1.4E-7 T 18-10-2018 IPR038610 FliK-like, C-terminal domain superfamily SHALO_3015 d643a73884078d8f79460c809aff3006 513 Pfam PF02120 Flagellar hook-length control protein FliK 400 478 1.9E-11 T 18-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal SHALO_0342 997437050fc0bbe0734800f7275028eb 156 Pfam PF05573 NosL 19 146 2.5E-20 T 18-10-2018 IPR008719 Nitrous oxide reductase accessory protein NosL SHALO_0342 997437050fc0bbe0734800f7275028eb 156 SUPERFAMILY SSF160387 41 153 2.62E-25 T 18-10-2018 SHALO_1642 d4a6a00d5bc8c3a32da0424831300619 261 Gene3D G3DSA:1.20.58.340 74 180 2.0E-5 T 18-10-2018 SHALO_1642 d4a6a00d5bc8c3a32da0424831300619 261 SUPERFAMILY SSF144083 195 252 1.83E-14 T 18-10-2018 SHALO_1642 d4a6a00d5bc8c3a32da0424831300619 261 Pfam PF01544 CorA-like Mg2+ transporter protein 79 257 3.7E-30 T 18-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 SHALO_1642 d4a6a00d5bc8c3a32da0424831300619 261 Gene3D G3DSA:1.20.58.340 183 261 1.1E-15 T 18-10-2018 SHALO_1642 d4a6a00d5bc8c3a32da0424831300619 261 SUPERFAMILY SSF143865 8 191 1.57E-7 T 18-10-2018 SHALO_1743 7d5b69c47f64f9b13966633884122afc 400 Pfam PF02687 FtsX-like permease family 293 392 3.2E-9 T 18-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 SHALO_2777 15f95251695220a28935929e11cd36b2 432 SUPERFAMILY SSF54534 134 252 1.08E-26 T 18-10-2018 SHALO_2777 15f95251695220a28935929e11cd36b2 432 Pfam PF05697 Bacterial trigger factor protein (TF) 1 145 7.0E-28 T 18-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 SHALO_2777 15f95251695220a28935929e11cd36b2 432 Gene3D G3DSA:1.10.3120.10 116 430 5.9E-68 T 18-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 SHALO_2777 15f95251695220a28935929e11cd36b2 432 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 270 428 1.1E-27 T 18-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 SHALO_2777 15f95251695220a28935929e11cd36b2 432 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 159 242 4.3E-12 T 18-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain SHALO_2777 15f95251695220a28935929e11cd36b2 432 SUPERFAMILY SSF102735 1 129 1.83E-23 T 18-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 SHALO_2777 15f95251695220a28935929e11cd36b2 432 Gene3D G3DSA:3.10.50.40 152 251 5.9E-68 T 18-10-2018 SHALO_2777 15f95251695220a28935929e11cd36b2 432 Hamap MF_00303 Trigger factor [tig]. 1 432 18.362 T 18-10-2018 IPR005215 Trigger factor GO:0015031 SHALO_2777 15f95251695220a28935929e11cd36b2 432 TIGRFAM TIGR00115 tig: trigger factor 12 427 7.2E-102 T 18-10-2018 IPR005215 Trigger factor GO:0015031 SHALO_2777 15f95251695220a28935929e11cd36b2 432 PIRSF PIRSF003095 1 432 1.0E-92 T 18-10-2018 IPR005215 Trigger factor GO:0015031 SHALO_2777 15f95251695220a28935929e11cd36b2 432 SUPERFAMILY SSF109998 257 431 7.65E-27 T 18-10-2018 IPR027304 Trigger factor/SurA domain superfamily SHALO_2777 15f95251695220a28935929e11cd36b2 432 Gene3D G3DSA:3.30.70.1050 1 115 4.9E-20 T 18-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 SHALO_1244 c448dcea1d9b1aaacada8ca0f7f575a0 291 Pfam PF00892 EamA-like transporter family 154 290 2.5E-12 T 18-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 SHALO_1244 c448dcea1d9b1aaacada8ca0f7f575a0 291 Pfam PF00892 EamA-like transporter family 6 139 9.8E-20 T 18-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 SHALO_1244 c448dcea1d9b1aaacada8ca0f7f575a0 291 SUPERFAMILY SSF103481 40 141 1.18E-13 T 18-10-2018 SHALO_0174 8038d96f9820709115d9f63c02c661fa 253 Gene3D G3DSA:3.40.50.300 1 234 3.7E-58 T 18-10-2018 SHALO_0174 8038d96f9820709115d9f63c02c661fa 253 Pfam PF00005 ABC transporter 20 166 8.0E-31 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_0174 8038d96f9820709115d9f63c02c661fa 253 SUPERFAMILY SSF52540 5 222 3.62E-54 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0174 8038d96f9820709115d9f63c02c661fa 253 SMART SM00382 29 213 3.8E-15 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_0174 8038d96f9820709115d9f63c02c661fa 253 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_1442 a874abc77ce4f966776c5dc436089b0f 354 SUPERFAMILY SSF51395 7 352 1.44E-88 T 18-10-2018 SHALO_1442 a874abc77ce4f966776c5dc436089b0f 354 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 289 309 - T 18-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 SHALO_1442 a874abc77ce4f966776c5dc436089b0f 354 PIRSF PIRSF000164 19 354 1.5E-94 T 18-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 SHALO_1442 a874abc77ce4f966776c5dc436089b0f 354 Gene3D G3DSA:3.20.20.70 4 354 2.2E-107 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_1442 a874abc77ce4f966776c5dc436089b0f 354 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 7 354 1.7E-118 T 18-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 SHALO_1442 a874abc77ce4f966776c5dc436089b0f 354 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 88 107 - T 18-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 SHALO_1442 a874abc77ce4f966776c5dc436089b0f 354 Pfam PF01180 Dihydroorotate dehydrogenase 53 337 7.7E-73 T 18-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 SHALO_0759 f8b5b49dfbf27e1255420c19d7f2f1cd 132 SUPERFAMILY SSF81901 26 113 7.59E-12 T 18-10-2018 SHALO_0759 f8b5b49dfbf27e1255420c19d7f2f1cd 132 SMART SM00671 49 84 3.6E-6 T 18-10-2018 IPR006597 Sel1-like repeat SHALO_0759 f8b5b49dfbf27e1255420c19d7f2f1cd 132 Gene3D G3DSA:1.25.40.10 17 130 2.3E-15 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SHALO_1215 081deecc1e37ac818581bab435ffbf01 112 Gene3D G3DSA:3.10.20.30 1 111 2.8E-9 T 18-10-2018 IPR012675 Beta-grasp domain superfamily SHALO_0526 867bb84f1582c9c39c56f7cf82a42187 324 SMART SM01004 1 321 8.1E-220 T 18-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 SHALO_0526 867bb84f1582c9c39c56f7cf82a42187 324 PIRSF PIRSF001415 1 324 6.8E-145 T 18-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 SHALO_0526 867bb84f1582c9c39c56f7cf82a42187 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 188 207 3.4E-55 T 18-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 SHALO_0526 867bb84f1582c9c39c56f7cf82a42187 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 295 314 3.4E-55 T 18-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 SHALO_0526 867bb84f1582c9c39c56f7cf82a42187 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 118 132 3.4E-55 T 18-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 SHALO_0526 867bb84f1582c9c39c56f7cf82a42187 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 150 169 3.4E-55 T 18-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 SHALO_0526 867bb84f1582c9c39c56f7cf82a42187 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 265 280 3.4E-55 T 18-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 SHALO_0526 867bb84f1582c9c39c56f7cf82a42187 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 240 256 3.4E-55 T 18-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 SHALO_0526 867bb84f1582c9c39c56f7cf82a42187 324 Gene3D G3DSA:3.20.20.70 1 322 3.3E-141 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_0526 867bb84f1582c9c39c56f7cf82a42187 324 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 240 252 - T 18-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 SHALO_0526 867bb84f1582c9c39c56f7cf82a42187 324 SUPERFAMILY SSF51569 2 322 4.1E-137 T 18-10-2018 SHALO_0526 867bb84f1582c9c39c56f7cf82a42187 324 Pfam PF00490 Delta-aminolevulinic acid dehydratase 3 319 1.8E-143 T 18-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 SHALO_2667 9dd24662b7ff7e1a71b38327eeb21cd5 135 Gene3D G3DSA:3.30.420.270 61 128 3.3E-8 T 18-10-2018 SHALO_2667 9dd24662b7ff7e1a71b38327eeb21cd5 135 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 132 1.6E-30 T 18-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 SHALO_1597 566c85f0d9212232165acafe851832ef 123 Pfam PF00034 Cytochrome c 36 116 1.2E-5 T 18-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_1597 566c85f0d9212232165acafe851832ef 123 Gene3D G3DSA:1.10.760.10 31 117 5.4E-14 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_1597 566c85f0d9212232165acafe851832ef 123 SUPERFAMILY SSF46626 3 119 4.49E-11 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_2721 cd7fac45062b937ec024d812ea71c43c 440 PRINTS PR00111 Alpha/beta hydrolase fold signature 70 85 1.7E-15 T 18-10-2018 IPR000073 Alpha/beta hydrolase fold-1 SHALO_2721 cd7fac45062b937ec024d812ea71c43c 440 PRINTS PR00111 Alpha/beta hydrolase fold signature 128 141 1.7E-15 T 18-10-2018 IPR000073 Alpha/beta hydrolase fold-1 SHALO_2721 cd7fac45062b937ec024d812ea71c43c 440 PRINTS PR00111 Alpha/beta hydrolase fold signature 241 255 1.7E-15 T 18-10-2018 IPR000073 Alpha/beta hydrolase fold-1 SHALO_2721 cd7fac45062b937ec024d812ea71c43c 440 PRINTS PR00111 Alpha/beta hydrolase fold signature 114 127 1.7E-15 T 18-10-2018 IPR000073 Alpha/beta hydrolase fold-1 SHALO_2721 cd7fac45062b937ec024d812ea71c43c 440 Pfam PF00561 alpha/beta hydrolase fold 44 281 2.1E-28 T 18-10-2018 IPR000073 Alpha/beta hydrolase fold-1 SHALO_2721 cd7fac45062b937ec024d812ea71c43c 440 Gene3D G3DSA:3.40.50.1820 16 306 1.1E-51 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold SHALO_2721 cd7fac45062b937ec024d812ea71c43c 440 SUPERFAMILY SSF53474 31 296 1.91E-46 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold SHALO_2207 a4400d2a6520ee3e4fc4a86864a68ea3 240 SUPERFAMILY SSF51366 1 234 1.21E-68 T 18-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 SHALO_2207 a4400d2a6520ee3e4fc4a86864a68ea3 240 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 3 230 2.7E-80 T 18-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 SHALO_2207 a4400d2a6520ee3e4fc4a86864a68ea3 240 Gene3D G3DSA:3.20.20.70 3 239 2.5E-80 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_2207 a4400d2a6520ee3e4fc4a86864a68ea3 240 Pfam PF00977 Histidine biosynthesis protein 3 226 1.5E-75 T 18-10-2018 IPR006062 Histidine biosynthesis GO:0000105 SHALO_2207 a4400d2a6520ee3e4fc4a86864a68ea3 240 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 234 35.545 T 18-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 SHALO_1315 f86d31497735cec47185a6b2e4c60556 130 SUPERFAMILY SSF49367 14 122 5.36E-26 T 18-10-2018 IPR036073 Desulfoferrodoxin, ferrous iron-binding domain superfamily GO:0005506|GO:0016491|GO:0055114 SHALO_1315 f86d31497735cec47185a6b2e4c60556 130 Gene3D G3DSA:2.60.40.730 3 130 1.1E-23 T 18-10-2018 IPR036073 Desulfoferrodoxin, ferrous iron-binding domain superfamily GO:0005506|GO:0016491|GO:0055114 SHALO_1315 f86d31497735cec47185a6b2e4c60556 130 Pfam PF01880 Desulfoferrodoxin 21 121 5.8E-25 T 18-10-2018 IPR002742 Desulfoferrodoxin, ferrous iron-binding domain GO:0005506|GO:0016491|GO:0055114 SHALO_1798 2d4e9ea23134383d8b8b1aafeb0cdc07 652 Pfam PF00005 ABC transporter 348 481 1.0E-17 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_1798 2d4e9ea23134383d8b8b1aafeb0cdc07 652 ProSitePatterns PS00211 ABC transporters family signature. 453 467 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_1798 2d4e9ea23134383d8b8b1aafeb0cdc07 652 Pfam PF16326 ABC transporter C-terminal domain 577 644 7.0E-12 T 18-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 SHALO_1798 2d4e9ea23134383d8b8b1aafeb0cdc07 652 SUPERFAMILY SSF52540 334 530 1.19E-42 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_1798 2d4e9ea23134383d8b8b1aafeb0cdc07 652 Gene3D G3DSA:3.40.50.300 4 282 1.5E-64 T 18-10-2018 SHALO_1798 2d4e9ea23134383d8b8b1aafeb0cdc07 652 Pfam PF12848 ABC transporter 227 297 7.9E-7 T 18-10-2018 IPR032781 ABC-transporter extension domain SHALO_1798 2d4e9ea23134383d8b8b1aafeb0cdc07 652 Pfam PF00005 ABC transporter 19 188 1.4E-27 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_1798 2d4e9ea23134383d8b8b1aafeb0cdc07 652 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_1798 2d4e9ea23134383d8b8b1aafeb0cdc07 652 Gene3D G3DSA:3.40.50.300 297 568 4.8E-50 T 18-10-2018 SHALO_1798 2d4e9ea23134383d8b8b1aafeb0cdc07 652 SMART SM00382 356 525 1.6E-10 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_1798 2d4e9ea23134383d8b8b1aafeb0cdc07 652 SMART SM00382 28 235 4.2E-10 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_1798 2d4e9ea23134383d8b8b1aafeb0cdc07 652 SUPERFAMILY SSF52540 9 237 1.24E-47 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_1798 2d4e9ea23134383d8b8b1aafeb0cdc07 652 Gene3D G3DSA:1.10.287.380 569 647 1.4E-10 T 18-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 SHALO_2882 81c5d7195383605874f507e38d841a0a 460 SMART SM00448 1 114 4.4E-19 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_2882 81c5d7195383605874f507e38d841a0a 460 Gene3D G3DSA:1.10.8.60 311 382 1.5E-21 T 18-10-2018 SHALO_2882 81c5d7195383605874f507e38d841a0a 460 Pfam PF00072 Response regulator receiver domain 3 113 9.1E-17 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_2882 81c5d7195383605874f507e38d841a0a 460 SUPERFAMILY SSF52172 1 182 1.08E-24 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_2882 81c5d7195383605874f507e38d841a0a 460 Gene3D G3DSA:3.40.50.2300 1 126 1.3E-20 T 18-10-2018 SHALO_2882 81c5d7195383605874f507e38d841a0a 460 Pfam PF00158 Sigma-54 interaction domain 139 304 1.1E-63 T 18-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SHALO_2882 81c5d7195383605874f507e38d841a0a 460 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 162 175 - T 18-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 SHALO_2882 81c5d7195383605874f507e38d841a0a 460 Gene3D G3DSA:3.40.50.300 127 309 3.9E-60 T 18-10-2018 SHALO_2882 81c5d7195383605874f507e38d841a0a 460 SUPERFAMILY SSF52540 138 381 8.11E-62 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_2882 81c5d7195383605874f507e38d841a0a 460 SMART SM00382 158 305 6.2E-6 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_0897 5f63570851fd32f4d2c39a61826bdadd 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 8 19 1.1E-9 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SHALO_0897 5f63570851fd32f4d2c39a61826bdadd 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 29 1.1E-9 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SHALO_0897 5f63570851fd32f4d2c39a61826bdadd 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 40 1.1E-9 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SHALO_0897 5f63570851fd32f4d2c39a61826bdadd 289 SUPERFAMILY SSF46785 2 75 1.36E-16 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SHALO_0897 5f63570851fd32f4d2c39a61826bdadd 289 Gene3D G3DSA:1.10.10.10 1 81 1.3E-21 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_0897 5f63570851fd32f4d2c39a61826bdadd 289 Gene3D G3DSA:3.40.190.290 82 288 5.6E-46 T 18-10-2018 SHALO_0897 5f63570851fd32f4d2c39a61826bdadd 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 2 52 1.2E-16 T 18-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SHALO_0897 5f63570851fd32f4d2c39a61826bdadd 289 Pfam PF03466 LysR substrate binding domain 80 287 5.0E-33 T 18-10-2018 IPR005119 LysR, substrate-binding SHALO_0897 5f63570851fd32f4d2c39a61826bdadd 289 SUPERFAMILY SSF53850 80 288 4.98E-31 T 18-10-2018 SHALO_0625 0d47e04a0becde3574ec9bf8e8ffc4c5 107 Gene3D G3DSA:3.30.2310.20 1 101 1.2E-14 T 18-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily SHALO_0625 0d47e04a0becde3574ec9bf8e8ffc4c5 107 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 6 97 6.0E-12 T 18-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family SHALO_0625 0d47e04a0becde3574ec9bf8e8ffc4c5 107 SUPERFAMILY SSF143011 4 95 9.94E-5 T 18-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily SHALO_2866 1b26e858f6f6565186fd16af3db13cd7 147 Pfam PF09719 Putative redox-active protein (C_GCAxxG_C_C) 17 139 1.8E-24 T 18-10-2018 IPR010181 CGCAxxGCC motif SHALO_2866 1b26e858f6f6565186fd16af3db13cd7 147 SUPERFAMILY SSF48695 13 84 5.44E-6 T 18-10-2018 IPR036280 Multiheme cytochrome superfamily SHALO_2866 1b26e858f6f6565186fd16af3db13cd7 147 TIGRFAM TIGR01909 C_GCAxxG_C_C: C_GCAxxG_C_C family protein 18 107 3.8E-17 T 18-10-2018 IPR010181 CGCAxxGCC motif SHALO_1935 7c1e78d68c947985911c77bb042d4e58 151 SUPERFAMILY SSF48695 5 137 4.74E-5 T 18-10-2018 IPR036280 Multiheme cytochrome superfamily SHALO_1935 7c1e78d68c947985911c77bb042d4e58 151 Pfam PF09626 Dihaem cytochrome c 28 137 3.6E-36 T 18-10-2018 IPR018588 Dihaem cytochrome c SHALO_1470 c526083ecdcc429a0ae20223038b5031 139 SMART SM00450 32 130 4.7E-12 T 18-10-2018 IPR001763 Rhodanese-like domain SHALO_1470 c526083ecdcc429a0ae20223038b5031 139 SUPERFAMILY SSF52821 23 127 1.24E-18 T 18-10-2018 IPR036873 Rhodanese-like domain superfamily SHALO_1470 c526083ecdcc429a0ae20223038b5031 139 Gene3D G3DSA:3.40.250.10 14 133 5.4E-18 T 18-10-2018 IPR036873 Rhodanese-like domain superfamily SHALO_1470 c526083ecdcc429a0ae20223038b5031 139 Pfam PF00581 Rhodanese-like domain 40 125 1.2E-9 T 18-10-2018 IPR001763 Rhodanese-like domain SHALO_1318 e852d44477567da501c55352da999506 274 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 2 274 21.62 T 18-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 SHALO_1318 e852d44477567da501c55352da999506 274 Gene3D G3DSA:3.90.650.10 131 273 9.5E-23 T 18-10-2018 IPR036676 PurM-like, C-terminal domain superfamily SHALO_1318 e852d44477567da501c55352da999506 274 SUPERFAMILY SSF56042 128 263 5.58E-16 T 18-10-2018 IPR036676 PurM-like, C-terminal domain superfamily SHALO_1318 e852d44477567da501c55352da999506 274 SUPERFAMILY SSF55326 12 122 1.31E-23 T 18-10-2018 IPR036921 PurM-like, N-terminal domain superfamily SHALO_1318 e852d44477567da501c55352da999506 274 Gene3D G3DSA:3.30.1330.10 4 125 5.2E-28 T 18-10-2018 IPR036921 PurM-like, N-terminal domain superfamily SHALO_1318 e852d44477567da501c55352da999506 274 Pfam PF00586 AIR synthase related protein, N-terminal domain 18 122 5.9E-15 T 18-10-2018 IPR016188 PurM-like, N-terminal domain SHALO_1703 11f6dd43c4ad4756fc705c69e207dbc4 255 Gene3D G3DSA:3.40.50.620 2 251 6.7E-81 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_1703 11f6dd43c4ad4756fc705c69e207dbc4 255 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 3 249 46.901 T 18-10-2018 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 SHALO_1703 11f6dd43c4ad4756fc705c69e207dbc4 255 TIGRFAM TIGR00552 nadE: NAD+ synthetase 5 249 9.0E-74 T 18-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 SHALO_1703 11f6dd43c4ad4756fc705c69e207dbc4 255 Pfam PF02540 NAD synthase 11 246 3.9E-76 T 18-10-2018 IPR022310 NAD/GMP synthase SHALO_1703 11f6dd43c4ad4756fc705c69e207dbc4 255 SUPERFAMILY SSF52402 4 248 5.29E-68 T 18-10-2018 SHALO_1423 a9bc70849e80e5a19cff8bd5d33a51f7 105 Gene3D G3DSA:3.30.70.20 13 87 2.2E-14 T 18-10-2018 SHALO_1423 a9bc70849e80e5a19cff8bd5d33a51f7 105 Pfam PF12838 4Fe-4S dicluster domain 18 67 4.0E-8 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_1423 a9bc70849e80e5a19cff8bd5d33a51f7 105 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 56 67 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_1423 a9bc70849e80e5a19cff8bd5d33a51f7 105 SUPERFAMILY SSF54862 8 88 1.15E-17 T 18-10-2018 SHALO_0680 9e818dbfd4e88166f699249bbf9b3271 505 Gene3D G3DSA:3.40.50.300 96 373 4.8E-128 T 18-10-2018 SHALO_0680 9e818dbfd4e88166f699249bbf9b3271 505 Gene3D G3DSA:2.40.30.20 3 94 1.5E-34 T 18-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 SHALO_0680 9e818dbfd4e88166f699249bbf9b3271 505 SUPERFAMILY SSF52540 98 372 2.92E-100 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0680 9e818dbfd4e88166f699249bbf9b3271 505 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 93 4.6E-16 T 18-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 SHALO_0680 9e818dbfd4e88166f699249bbf9b3271 505 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 151 366 7.7E-77 T 18-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 SHALO_0680 9e818dbfd4e88166f699249bbf9b3271 505 Gene3D G3DSA:1.20.150.20 374 505 1.8E-50 T 18-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SHALO_0680 9e818dbfd4e88166f699249bbf9b3271 505 PIRSF PIRSF039088 3 505 1.8E-261 T 18-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SHALO_0680 9e818dbfd4e88166f699249bbf9b3271 505 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 3 503 52.195 T 18-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SHALO_0680 9e818dbfd4e88166f699249bbf9b3271 505 SUPERFAMILY SSF47917 374 502 1.67E-46 T 18-10-2018 SHALO_0680 9e818dbfd4e88166f699249bbf9b3271 505 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 373 498 2.2E-47 T 18-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SHALO_0680 9e818dbfd4e88166f699249bbf9b3271 505 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 357 366 - T 18-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 SHALO_0680 9e818dbfd4e88166f699249bbf9b3271 505 SUPERFAMILY SSF50615 12 94 3.4E-28 T 18-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 SHALO_0680 9e818dbfd4e88166f699249bbf9b3271 505 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 5 503 5.7E-261 T 18-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SHALO_0687 355558ec6cc30c768159e33c78568e2f 422 Gene3D G3DSA:2.120.10.30 161 422 4.9E-32 T 18-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like SHALO_0687 355558ec6cc30c768159e33c78568e2f 422 Pfam PF07676 WD40-like Beta Propeller Repeat 274 307 0.0048 T 18-10-2018 IPR011659 WD40-like Beta Propeller SHALO_0687 355558ec6cc30c768159e33c78568e2f 422 SUPERFAMILY SSF69304 175 422 6.02E-31 T 18-10-2018 SHALO_2992 927f76ea6d7d2feeacb1861bc104f688 421 Pfam PF03916 Polysulphide reductase, NrfD 82 357 2.2E-11 T 18-10-2018 IPR005614 NrfD family SHALO_2797 cff275c7ef6faec31f28f6713fa72d59 212 Gene3D G3DSA:3.30.70.20 42 206 4.2E-52 T 18-10-2018 SHALO_2797 cff275c7ef6faec31f28f6713fa72d59 212 Gene3D G3DSA:3.30.70.20 1 41 5.5E-8 T 18-10-2018 SHALO_2797 cff275c7ef6faec31f28f6713fa72d59 212 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 90 101 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_2797 cff275c7ef6faec31f28f6713fa72d59 212 Pfam PF13247 4Fe-4S dicluster domain 51 145 3.2E-22 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_2797 cff275c7ef6faec31f28f6713fa72d59 212 SUPERFAMILY SSF54862 2 183 2.83E-60 T 18-10-2018 SHALO_2797 cff275c7ef6faec31f28f6713fa72d59 212 Pfam PF12800 4Fe-4S binding domain 10 24 6.1E-4 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_0165 c680be3dadc930f85cc33866b2ed5852 282 SMART SM00387 175 279 4.6E-16 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_0165 c680be3dadc930f85cc33866b2ed5852 282 SUPERFAMILY SSF47384 60 133 9.02E-6 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SHALO_0165 c680be3dadc930f85cc33866b2ed5852 282 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 176 274 2.0E-13 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_0165 c680be3dadc930f85cc33866b2ed5852 282 Gene3D G3DSA:3.30.565.10 133 273 6.6E-30 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_0165 c680be3dadc930f85cc33866b2ed5852 282 SUPERFAMILY SSF55874 135 275 3.54E-22 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_0165 c680be3dadc930f85cc33866b2ed5852 282 Gene3D G3DSA:1.10.287.130 76 132 6.6E-30 T 18-10-2018 SHALO_0711 425465a4b8a7ca07f97b7aae18a5e2a9 307 Pfam PF03547 Membrane transport protein 4 143 4.8E-17 T 18-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 SHALO_1250 c6791bbef477e703f0506e41eaf94af6 122 SUPERFAMILY SSF50475 1 119 6.81E-22 T 18-10-2018 SHALO_1250 c6791bbef477e703f0506e41eaf94af6 122 Gene3D G3DSA:2.30.110.10 1 122 2.6E-43 T 18-10-2018 IPR012349 FMN-binding split barrel GO:0048037 SHALO_2220 442ec036d4bd9c23764dd07dcf59bff7 444 SUPERFAMILY SSF53383 39 442 2.24E-101 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase SHALO_2220 442ec036d4bd9c23764dd07dcf59bff7 444 PIRSF PIRSF000390 19 443 4.2E-109 T 18-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SHALO_2220 442ec036d4bd9c23764dd07dcf59bff7 444 Gene3D G3DSA:3.90.1150.10 311 444 2.7E-48 T 18-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 SHALO_2220 442ec036d4bd9c23764dd07dcf59bff7 444 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 49 437 4.1E-94 T 18-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SHALO_2220 442ec036d4bd9c23764dd07dcf59bff7 444 Gene3D G3DSA:3.40.640.10 2 309 2.7E-96 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 SHALO_2387 0dea25e6ec96e1988e5e8947030bdee4 488 SUPERFAMILY SSF81442 9 485 4.84E-114 T 18-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_2387 0dea25e6ec96e1988e5e8947030bdee4 488 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 215 270 - T 18-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_2387 0dea25e6ec96e1988e5e8947030bdee4 488 Gene3D G3DSA:1.20.210.10 1 484 8.9E-181 T 18-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_2387 0dea25e6ec96e1988e5e8947030bdee4 488 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 8 485 7.4E-217 T 18-10-2018 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 SHALO_2387 0dea25e6ec96e1988e5e8947030bdee4 488 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 13 454 5.1E-110 T 18-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_0703 6a133cf92573c09a337ceed4e099a603 312 PIRSF PIRSF006621 1 312 2.2E-82 T 18-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 SHALO_0703 6a133cf92573c09a337ceed4e099a603 312 Gene3D G3DSA:1.10.1200.80 247 312 1.7E-11 T 18-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 SHALO_0703 6a133cf92573c09a337ceed4e099a603 312 SUPERFAMILY SSF51395 12 310 8.06E-71 T 18-10-2018 SHALO_0703 6a133cf92573c09a337ceed4e099a603 312 Pfam PF01207 Dihydrouridine synthase (Dus) 14 299 1.7E-71 T 18-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 SHALO_0703 6a133cf92573c09a337ceed4e099a603 312 Gene3D G3DSA:3.20.20.70 9 246 4.9E-71 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_0703 6a133cf92573c09a337ceed4e099a603 312 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 95 113 - T 18-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 SHALO_1520 cbda92c9177444913873e771179fcb0a 372 Pfam PF01888 CbiD 12 270 4.8E-90 T 18-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 SHALO_1520 cbda92c9177444913873e771179fcb0a 372 PIRSF PIRSF026782 8 365 1.4E-114 T 18-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 SHALO_1520 cbda92c9177444913873e771179fcb0a 372 TIGRFAM TIGR00312 cbiD: cobalamin biosynthesis protein CbiD 20 357 1.3E-87 T 18-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 SHALO_1520 cbda92c9177444913873e771179fcb0a 372 Hamap MF_00787 Cobalt-precorrin-5B C(1)-methyltransferase [cbiD]. 12 361 29.269 T 18-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 SHALO_1520 cbda92c9177444913873e771179fcb0a 372 Gene3D G3DSA:3.30.2110.10 14 184 3.6E-48 T 18-10-2018 IPR036074 CbiD superfamily GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 SHALO_1520 cbda92c9177444913873e771179fcb0a 372 SUPERFAMILY SSF111342 3 288 2.75E-83 T 18-10-2018 IPR036074 CbiD superfamily GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 SHALO_0906 8c9bf122de75be04c1debfec391ad844 510 Gene3D G3DSA:1.10.1130.10 50 480 1.0E-196 T 18-10-2018 SHALO_0906 8c9bf122de75be04c1debfec391ad844 510 Gene3D G3DSA:1.20.140.10 321 462 1.0E-196 T 18-10-2018 SHALO_0906 8c9bf122de75be04c1debfec391ad844 510 PIRSF PIRSF000243 1 491 3.1E-167 T 18-10-2018 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 SHALO_0906 8c9bf122de75be04c1debfec391ad844 510 SUPERFAMILY SSF48695 48 489 7.62E-156 T 18-10-2018 IPR036280 Multiheme cytochrome superfamily SHALO_0906 8c9bf122de75be04c1debfec391ad844 510 Pfam PF02335 Cytochrome c552 50 483 8.0E-175 T 18-10-2018 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 SHALO_0906 8c9bf122de75be04c1debfec391ad844 510 Hamap MF_01182 Cytochrome c-552 [nrfA]. 2 488 53.484 T 18-10-2018 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 SHALO_2856 6e5a15ada0054f1bfd6d5b22c3ff43ba 131 SMART SM00232 1 128 2.3E-16 T 18-10-2018 IPR000555 JAB1/MPN/MOV34 metalloenzyme domain GO:0005515 SHALO_2856 6e5a15ada0054f1bfd6d5b22c3ff43ba 131 Gene3D G3DSA:3.40.140.10 1 131 3.5E-41 T 18-10-2018 SHALO_2856 6e5a15ada0054f1bfd6d5b22c3ff43ba 131 SUPERFAMILY SSF102712 1 127 1.31E-30 T 18-10-2018 SHALO_2856 6e5a15ada0054f1bfd6d5b22c3ff43ba 131 Pfam PF14464 Prokaryotic homologs of the JAB domain 5 112 9.1E-26 T 18-10-2018 IPR028090 JAB domain, prokaryotic SHALO_0463 8821ee919b97768a2bcae71185f32763 240 Gene3D G3DSA:3.40.50.300 1 237 1.8E-61 T 18-10-2018 SHALO_0463 8821ee919b97768a2bcae71185f32763 240 Pfam PF00005 ABC transporter 22 164 2.1E-29 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_0463 8821ee919b97768a2bcae71185f32763 240 PIRSF PIRSF039137 1 237 8.3E-110 T 18-10-2018 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 SHALO_0463 8821ee919b97768a2bcae71185f32763 240 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_0463 8821ee919b97768a2bcae71185f32763 240 SMART SM00382 30 215 7.0E-11 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_0463 8821ee919b97768a2bcae71185f32763 240 SUPERFAMILY SSF52540 5 235 1.66E-59 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0568 b8dc7e8a376f47f2bcb46f2e96154352 141 Gene3D G3DSA:1.10.10.10 1 82 1.4E-14 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_0568 b8dc7e8a376f47f2bcb46f2e96154352 141 Pfam PF01475 Ferric uptake regulator family 11 121 2.2E-20 T 18-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 SHALO_0568 b8dc7e8a376f47f2bcb46f2e96154352 141 SUPERFAMILY SSF46785 3 130 8.16E-24 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SHALO_0568 b8dc7e8a376f47f2bcb46f2e96154352 141 Gene3D G3DSA:3.30.1490.190 83 140 1.0E-10 T 18-10-2018 SHALO_1962 94cd3fb6b7badf37773625a109fb9896 698 Pfam PF07664 Ferrous iron transport protein B C terminus 458 510 1.7E-14 T 18-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 SHALO_1962 94cd3fb6b7badf37773625a109fb9896 698 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 10 666 1.8E-191 T 18-10-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 SHALO_1962 94cd3fb6b7badf37773625a109fb9896 698 Gene3D G3DSA:3.40.50.300 5 183 4.3E-45 T 18-10-2018 SHALO_1962 94cd3fb6b7badf37773625a109fb9896 698 SUPERFAMILY SSF52540 6 163 1.3E-38 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_1962 94cd3fb6b7badf37773625a109fb9896 698 Pfam PF02421 Ferrous iron transport protein B 6 157 3.9E-65 T 18-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 SHALO_1962 94cd3fb6b7badf37773625a109fb9896 698 Pfam PF07670 Nucleoside recognition 354 447 6.2E-14 T 18-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 SHALO_1962 94cd3fb6b7badf37773625a109fb9896 698 Pfam PF07670 Nucleoside recognition 515 669 1.3E-30 T 18-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 SHALO_0883 1a758b1a5c61856bc0b1d84a216b3f07 547 Pfam PF01464 Transglycosylase SLT domain 388 482 3.2E-15 T 18-10-2018 IPR008258 Transglycosylase SLT domain 1 SHALO_0883 1a758b1a5c61856bc0b1d84a216b3f07 547 Gene3D G3DSA:1.10.530.10 343 534 7.1E-25 T 18-10-2018 SHALO_0883 1a758b1a5c61856bc0b1d84a216b3f07 547 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 394 422 - T 18-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 SHALO_0883 1a758b1a5c61856bc0b1d84a216b3f07 547 SUPERFAMILY SSF53955 388 534 9.57E-28 T 18-10-2018 IPR023346 Lysozyme-like domain superfamily SHALO_1965 e7c494f8615cd32f05856e7d37eac92b 536 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 62 406 1.2E-17 T 18-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 SHALO_1965 e7c494f8615cd32f05856e7d37eac92b 536 SUPERFAMILY SSF52540 61 424 1.71E-21 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0550 64729132e0affe856071a53cc16ff3c6 340 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 251 326 3.0E-28 T 18-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 SHALO_0550 64729132e0affe856071a53cc16ff3c6 340 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 24 325 4.2E-136 T 18-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 SHALO_0550 64729132e0affe856071a53cc16ff3c6 340 SMART SM00382 51 186 4.6E-12 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_0550 64729132e0affe856071a53cc16ff3c6 340 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 253 325 7.2E-26 T 18-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 SHALO_0550 64729132e0affe856071a53cc16ff3c6 340 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 4 234 1.2E-111 T 18-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 SHALO_0550 64729132e0affe856071a53cc16ff3c6 340 SUPERFAMILY SSF52540 20 247 1.16E-52 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0550 64729132e0affe856071a53cc16ff3c6 340 SUPERFAMILY SSF46785 256 329 9.52E-20 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SHALO_0550 64729132e0affe856071a53cc16ff3c6 340 Gene3D G3DSA:1.10.10.10 257 333 1.6E-26 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_0550 64729132e0affe856071a53cc16ff3c6 340 Gene3D G3DSA:3.40.50.300 20 181 3.1E-44 T 18-10-2018 SHALO_0550 64729132e0affe856071a53cc16ff3c6 340 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 340 149.232 T 18-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 SHALO_0550 64729132e0affe856071a53cc16ff3c6 340 Gene3D G3DSA:1.10.8.60 182 256 1.5E-23 T 18-10-2018 SHALO_1144 3605c6efc13c402746478efc2f69036e 182 ProSitePatterns PS00194 Thioredoxin family active site. 72 90 - T 18-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 SHALO_1144 3605c6efc13c402746478efc2f69036e 182 Gene3D G3DSA:3.40.30.10 15 182 2.3E-34 T 18-10-2018 SHALO_1144 3605c6efc13c402746478efc2f69036e 182 Pfam PF13905 Thioredoxin-like 68 160 1.5E-14 T 18-10-2018 IPR012336 Thioredoxin-like fold SHALO_1144 3605c6efc13c402746478efc2f69036e 182 SUPERFAMILY SSF52833 2 182 1.02E-29 T 18-10-2018 IPR036249 Thioredoxin-like superfamily SHALO_1216 67fe905139b7cef97bd0cbaf130a4ca2 98 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 13 87 1.5E-13 T 18-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SHALO_1216 67fe905139b7cef97bd0cbaf130a4ca2 98 Gene3D G3DSA:3.10.20.30 1 98 1.8E-18 T 18-10-2018 IPR012675 Beta-grasp domain superfamily SHALO_1216 67fe905139b7cef97bd0cbaf130a4ca2 98 SUPERFAMILY SSF54292 2 94 3.15E-17 T 18-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 SHALO_1216 67fe905139b7cef97bd0cbaf130a4ca2 98 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 18-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 SHALO_1295 3792488e97eb09f5f03c0cdaa8b3dce9 164 Gene3D G3DSA:3.30.460.80 18 121 2.0E-12 T 18-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_1295 3792488e97eb09f5f03c0cdaa8b3dce9 164 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 88 126 3.0E-12 T 18-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_1295 3792488e97eb09f5f03c0cdaa8b3dce9 164 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 39 138 2.6E-18 T 18-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_1295 3792488e97eb09f5f03c0cdaa8b3dce9 164 SUPERFAMILY SSF143243 27 137 1.19E-21 T 18-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_2339 22b099ffc70470ed4248faff84474568 381 Gene3D G3DSA:1.20.1250.20 1 372 2.0E-38 T 18-10-2018 SHALO_2339 22b099ffc70470ed4248faff84474568 381 SUPERFAMILY SSF103473 5 371 2.35E-41 T 18-10-2018 IPR036259 MFS transporter superfamily SHALO_2339 22b099ffc70470ed4248faff84474568 381 Pfam PF07690 Major Facilitator Superfamily 5 341 8.7E-33 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SHALO_2519 811edfacf220b3dcf5dc45d5256f8115 820 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 8 551 8.0E-130 T 18-10-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 SHALO_2519 811edfacf220b3dcf5dc45d5256f8115 820 Gene3D G3DSA:3.40.50.300 2 179 1.2E-42 T 18-10-2018 SHALO_2519 811edfacf220b3dcf5dc45d5256f8115 820 SUPERFAMILY SSF52540 2 185 2.38E-41 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_2519 811edfacf220b3dcf5dc45d5256f8115 820 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 25 43 6.5E-5 T 18-10-2018 IPR006073 GTP binding domain GO:0005525 SHALO_2519 811edfacf220b3dcf5dc45d5256f8115 820 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 4 24 6.5E-5 T 18-10-2018 IPR006073 GTP binding domain GO:0005525 SHALO_2519 811edfacf220b3dcf5dc45d5256f8115 820 Pfam PF07670 Nucleoside recognition 353 449 2.2E-11 T 18-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 SHALO_2519 811edfacf220b3dcf5dc45d5256f8115 820 Pfam PF07670 Nucleoside recognition 520 750 4.9E-15 T 18-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 SHALO_2519 811edfacf220b3dcf5dc45d5256f8115 820 Pfam PF07664 Ferrous iron transport protein B C terminus 459 512 1.8E-14 T 18-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 SHALO_2519 811edfacf220b3dcf5dc45d5256f8115 820 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 2 149 5.3E-12 T 18-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 SHALO_2519 811edfacf220b3dcf5dc45d5256f8115 820 Pfam PF02421 Ferrous iron transport protein B 2 156 8.4E-62 T 18-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 SHALO_2867 790f4e77a31e5e9b1ca8e427d622d0af 477 Pfam PF00990 Diguanylate cyclase, GGDEF domain 317 472 3.3E-42 T 18-10-2018 IPR000160 GGDEF domain SHALO_2867 790f4e77a31e5e9b1ca8e427d622d0af 477 Gene3D G3DSA:3.30.70.270 307 477 6.0E-49 T 18-10-2018 SHALO_2867 790f4e77a31e5e9b1ca8e427d622d0af 477 SMART SM00267 307 477 1.7E-52 T 18-10-2018 IPR000160 GGDEF domain SHALO_2867 790f4e77a31e5e9b1ca8e427d622d0af 477 SUPERFAMILY SSF55073 322 476 4.0E-41 T 18-10-2018 IPR029787 Nucleotide cyclase SHALO_2867 790f4e77a31e5e9b1ca8e427d622d0af 477 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 315 476 1.5E-45 T 18-10-2018 IPR000160 GGDEF domain SHALO_2321 7d0da2f78bfca8f216f92609e4bb6e46 267 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 131 165 - T 18-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 SHALO_2321 7d0da2f78bfca8f216f92609e4bb6e46 267 Gene3D G3DSA:2.30.30.60 117 166 4.3E-18 T 18-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily SHALO_2321 7d0da2f78bfca8f216f92609e4bb6e46 267 SUPERFAMILY SSF82861 16 100 1.96E-17 T 18-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 SHALO_2321 7d0da2f78bfca8f216f92609e4bb6e46 267 SUPERFAMILY SSF50182 102 167 1.7E-16 T 18-10-2018 IPR010920 LSM domain superfamily SHALO_2321 7d0da2f78bfca8f216f92609e4bb6e46 267 Pfam PF00924 Mechanosensitive ion channel 59 256 1.5E-50 T 18-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 SHALO_2321 7d0da2f78bfca8f216f92609e4bb6e46 267 SUPERFAMILY SSF82689 170 260 1.44E-21 T 18-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 SHALO_2321 7d0da2f78bfca8f216f92609e4bb6e46 267 Gene3D G3DSA:3.30.70.100 167 260 5.4E-18 T 18-10-2018 SHALO_1545 163895dee6b2496bcbf24770816bf5df 72 SUPERFAMILY SSF47413 5 55 5.35E-6 T 18-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 SHALO_1545 163895dee6b2496bcbf24770816bf5df 72 Gene3D G3DSA:1.10.260.40 6 65 5.1E-6 T 18-10-2018 SHALO_1750 93eddeaf8ad613da6668387ecf3b268f 528 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 335 515 5.9E-69 T 18-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_1750 93eddeaf8ad613da6668387ecf3b268f 528 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 9 517 20.698 T 18-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 SHALO_1750 93eddeaf8ad613da6668387ecf3b268f 528 Pfam PF14849 YidC periplasmic domain 236 324 3.5E-8 T 18-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain SHALO_1750 93eddeaf8ad613da6668387ecf3b268f 528 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 8 334 6.1E-40 T 18-10-2018 IPR028053 Membrane insertase YidC, N-terminal SHALO_1750 93eddeaf8ad613da6668387ecf3b268f 528 Pfam PF02096 60Kd inner membrane protein 336 515 1.6E-62 T 18-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 SHALO_1750 93eddeaf8ad613da6668387ecf3b268f 528 PRINTS PR00701 60kDa inner membrane protein signature 7 28 2.7E-41 T 18-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 SHALO_1750 93eddeaf8ad613da6668387ecf3b268f 528 PRINTS PR00701 60kDa inner membrane protein signature 481 504 2.7E-41 T 18-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 SHALO_1750 93eddeaf8ad613da6668387ecf3b268f 528 PRINTS PR00701 60kDa inner membrane protein signature 444 466 2.7E-41 T 18-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 SHALO_1750 93eddeaf8ad613da6668387ecf3b268f 528 PRINTS PR00701 60kDa inner membrane protein signature 397 420 2.7E-41 T 18-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 SHALO_1750 93eddeaf8ad613da6668387ecf3b268f 528 PRINTS PR00701 60kDa inner membrane protein signature 306 326 2.7E-41 T 18-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 SHALO_1750 93eddeaf8ad613da6668387ecf3b268f 528 PRINTS PR01900 YidC translocation/secretion protein signature 321 337 1.3E-27 T 18-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 SHALO_1750 93eddeaf8ad613da6668387ecf3b268f 528 PRINTS PR01900 YidC translocation/secretion protein signature 470 494 1.3E-27 T 18-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 SHALO_1750 93eddeaf8ad613da6668387ecf3b268f 528 PRINTS PR01900 YidC translocation/secretion protein signature 450 465 1.3E-27 T 18-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 SHALO_0367 528d7c448fdbf5a7f7763507a7fe9b1b 633 Pfam PF00589 Phage integrase family 283 446 4.7E-9 T 18-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SHALO_0367 528d7c448fdbf5a7f7763507a7fe9b1b 633 SUPERFAMILY SSF56349 284 458 2.65E-14 T 18-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SHALO_0367 528d7c448fdbf5a7f7763507a7fe9b1b 633 Gene3D G3DSA:1.10.443.10 267 449 4.8E-12 T 18-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 SHALO_1665 6a2773c945fef9945beca9cfe2712b91 341 Gene3D G3DSA:1.10.10.60 233 340 1.1E-19 T 18-10-2018 SHALO_1665 6a2773c945fef9945beca9cfe2712b91 341 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 28 209 4.9E-30 T 18-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal SHALO_1665 6a2773c945fef9945beca9cfe2712b91 341 SMART SM00342 254 335 3.2E-15 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_1665 6a2773c945fef9945beca9cfe2712b91 341 SUPERFAMILY SSF46689 289 334 7.62E-8 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SHALO_1665 6a2773c945fef9945beca9cfe2712b91 341 Pfam PF12833 Helix-turn-helix domain 260 336 4.6E-15 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_1149 ec24b4ac11771af78d16992ca9cfd65d 187 Pfam PF09335 SNARE associated Golgi protein 25 140 7.5E-14 T 18-10-2018 IPR032816 SNARE associated Golgi protein SHALO_0707 bfc7e2a1c7e557374489ca67fba85008 103 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 19 90 2.7E-23 T 18-10-2018 IPR001543 Surface presentation of antigen (SpoA) SHALO_0707 bfc7e2a1c7e557374489ca67fba85008 103 Gene3D G3DSA:2.30.330.10 8 99 6.3E-25 T 18-10-2018 IPR036429 SpoA-like superfamily SHALO_0707 bfc7e2a1c7e557374489ca67fba85008 103 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 19 91 1.2E-25 T 18-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 SHALO_0707 bfc7e2a1c7e557374489ca67fba85008 103 PRINTS PR00956 Flagellar motor switch protein FliN signature 36 52 1.2E-21 T 18-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 SHALO_0707 bfc7e2a1c7e557374489ca67fba85008 103 PRINTS PR00956 Flagellar motor switch protein FliN signature 19 35 1.2E-21 T 18-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 SHALO_0707 bfc7e2a1c7e557374489ca67fba85008 103 PRINTS PR00956 Flagellar motor switch protein FliN signature 52 65 1.2E-21 T 18-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 SHALO_0707 bfc7e2a1c7e557374489ca67fba85008 103 PRINTS PR00956 Flagellar motor switch protein FliN signature 65 80 1.2E-21 T 18-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 SHALO_0707 bfc7e2a1c7e557374489ca67fba85008 103 SUPERFAMILY SSF101801 18 93 2.88E-21 T 18-10-2018 IPR036429 SpoA-like superfamily SHALO_0459 988ecb683ac05598d5bd714f72903c9d 376 Gene3D G3DSA:3.40.50.2300 30 351 5.9E-86 T 18-10-2018 SHALO_0459 988ecb683ac05598d5bd714f72903c9d 376 Gene3D G3DSA:3.40.50.2300 146 274 5.9E-86 T 18-10-2018 SHALO_0459 988ecb683ac05598d5bd714f72903c9d 376 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 29 45 9.7E-12 T 18-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 SHALO_0459 988ecb683ac05598d5bd714f72903c9d 376 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 70 88 9.7E-12 T 18-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 SHALO_0459 988ecb683ac05598d5bd714f72903c9d 376 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 51 67 9.7E-12 T 18-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 SHALO_0459 988ecb683ac05598d5bd714f72903c9d 376 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 91 101 9.7E-12 T 18-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 SHALO_0459 988ecb683ac05598d5bd714f72903c9d 376 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 256 274 9.7E-12 T 18-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 SHALO_0459 988ecb683ac05598d5bd714f72903c9d 376 SUPERFAMILY SSF53822 27 374 1.12E-81 T 18-10-2018 IPR028082 Periplasmic binding protein-like I SHALO_0459 988ecb683ac05598d5bd714f72903c9d 376 Pfam PF13458 Periplasmic binding protein 29 368 1.5E-60 T 18-10-2018 IPR028081 Leucine-binding protein domain SHALO_0005 b7a9b4523a45744cf933ed8c618e2500 131 PIRSF PIRSF027377 1 130 5.4E-49 T 18-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 SHALO_0005 b7a9b4523a45744cf933ed8c618e2500 131 SUPERFAMILY SSF55620 11 116 1.45E-31 T 18-10-2018 SHALO_0005 b7a9b4523a45744cf933ed8c618e2500 131 Pfam PF14489 QueF-like protein 47 124 1.2E-30 T 18-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 SHALO_0005 b7a9b4523a45744cf933ed8c618e2500 131 TIGRFAM TIGR03139 QueF-II: 7-cyano-7-deazaguanine reductase 15 123 1.7E-38 T 18-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 SHALO_0005 b7a9b4523a45744cf933ed8c618e2500 131 Hamap MF_00818 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 131 45.035 T 18-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 SHALO_0005 b7a9b4523a45744cf933ed8c618e2500 131 Gene3D G3DSA:3.30.1130.10 12 130 3.9E-37 T 18-10-2018 SHALO_0273 a9f3370e31779476e41aa01c3a5bd148 322 Gene3D G3DSA:3.40.718.10 1 322 2.3E-117 T 18-10-2018 SHALO_0273 a9f3370e31779476e41aa01c3a5bd148 322 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 322 128.197 T 18-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 SHALO_0273 a9f3370e31779476e41aa01c3a5bd148 322 Pfam PF02504 Fatty acid synthesis protein 1 307 1.2E-102 T 18-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 SHALO_0273 a9f3370e31779476e41aa01c3a5bd148 322 SUPERFAMILY SSF53659 1 317 5.35E-87 T 18-10-2018 SHALO_0273 a9f3370e31779476e41aa01c3a5bd148 322 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 1 319 1.5E-107 T 18-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 SHALO_0273 a9f3370e31779476e41aa01c3a5bd148 322 PIRSF PIRSF002465 1 322 9.5E-117 T 18-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 SHALO_1138 49bc6656b2b83c0d3d9f51c2736bdb87 344 Gene3D G3DSA:3.40.50.12710 1 342 2.0E-47 T 18-10-2018 IPR038375 Protein arginine methyltransferase NDUFAF7 superfamily Reactome: R-HSA-6799198 SHALO_1138 49bc6656b2b83c0d3d9f51c2736bdb87 344 SUPERFAMILY SSF53335 2 339 1.16E-60 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_1138 49bc6656b2b83c0d3d9f51c2736bdb87 344 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 59 281 5.7E-13 T 18-10-2018 IPR003788 Protein arginine methyltransferase NDUFAF7 Reactome: R-HSA-6799198 SHALO_0096 68378ba6be6ae53acd1ba3f2c32cdb1a 701 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 122 693 1.8E-165 T 18-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 SHALO_0096 68378ba6be6ae53acd1ba3f2c32cdb1a 701 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 121 695 9.9E-128 T 18-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 SHALO_0096 68378ba6be6ae53acd1ba3f2c32cdb1a 701 SUPERFAMILY SSF51998 123 691 1.77E-140 T 18-10-2018 SHALO_0096 68378ba6be6ae53acd1ba3f2c32cdb1a 701 Pfam PF03477 ATP cone domain 4 86 1.0E-17 T 18-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 SHALO_1910 eb1fddefe7906f329120a554abff4742 254 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 252 3.7E-80 T 18-10-2018 SHALO_1910 eb1fddefe7906f329120a554abff4742 254 SUPERFAMILY SSF56219 1 254 9.55E-73 T 18-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily SHALO_1910 eb1fddefe7906f329120a554abff4742 254 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 28 37 - T 18-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 SHALO_1910 eb1fddefe7906f329120a554abff4742 254 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 253 1.4E-83 T 18-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 SHALO_1910 eb1fddefe7906f329120a554abff4742 254 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 245 1.4E-21 T 18-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase SHALO_1910 eb1fddefe7906f329120a554abff4742 254 Gene3D G3DSA:3.60.10.10 1 253 1.2E-82 T 18-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily SHALO_1910 eb1fddefe7906f329120a554abff4742 254 ProSitePatterns PS00727 AP endonucleases family 1 signature 2. 187 203 - T 18-10-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 SHALO_1205 88b1db0e805cd59ddae4491bf3d902aa 311 PIRSF PIRSF037505 3 107 7.0E-9 T 18-10-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 SHALO_1205 88b1db0e805cd59ddae4491bf3d902aa 311 PIRSF PIRSF037505 260 310 0.17 T 18-10-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 SHALO_1205 88b1db0e805cd59ddae4491bf3d902aa 311 Pfam PF02574 Homocysteine S-methyltransferase 14 308 3.6E-81 T 18-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 SHALO_1205 88b1db0e805cd59ddae4491bf3d902aa 311 SUPERFAMILY SSF82282 4 310 1.96E-88 T 18-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 SHALO_1205 88b1db0e805cd59ddae4491bf3d902aa 311 Gene3D G3DSA:3.20.20.330 1 308 3.2E-115 T 18-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 SHALO_2750 c692b670ce821a5835b313fb801316bb 160 Pfam PF04542 Sigma-70 region 2 3 66 2.6E-9 T 18-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 SHALO_2750 c692b670ce821a5835b313fb801316bb 160 SUPERFAMILY SSF88659 94 153 2.62E-12 T 18-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like SHALO_2750 c692b670ce821a5835b313fb801316bb 160 SUPERFAMILY SSF88946 2 76 4.32E-12 T 18-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 SHALO_2750 c692b670ce821a5835b313fb801316bb 160 Gene3D G3DSA:1.10.10.10 71 156 1.8E-10 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_2750 c692b670ce821a5835b313fb801316bb 160 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 3 151 1.7E-19 T 18-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 SHALO_2750 c692b670ce821a5835b313fb801316bb 160 Pfam PF08281 Sigma-70, region 4 97 141 1.2E-9 T 18-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHALO_2750 c692b670ce821a5835b313fb801316bb 160 Gene3D G3DSA:1.10.1740.10 1 68 1.0E-9 T 18-10-2018 SHALO_2293 9ce44e2f60b87c7c69ce0d64b7a993a9 266 Gene3D G3DSA:3.30.70.20 47 253 3.7E-69 T 18-10-2018 SHALO_2293 9ce44e2f60b87c7c69ce0d64b7a993a9 266 Pfam PF12800 4Fe-4S binding domain 64 77 0.022 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_2293 9ce44e2f60b87c7c69ce0d64b7a993a9 266 SUPERFAMILY SSF54862 54 237 7.85E-73 T 18-10-2018 SHALO_2293 9ce44e2f60b87c7c69ce0d64b7a993a9 266 Pfam PF13247 4Fe-4S dicluster domain 103 197 1.0E-28 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_2293 9ce44e2f60b87c7c69ce0d64b7a993a9 266 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 142 153 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_1933 3d2425602966a17872f6971e58863cb1 125 Gene3D G3DSA:1.20.120.1490 19 125 2.2E-12 T 18-10-2018 SHALO_1933 3d2425602966a17872f6971e58863cb1 125 Pfam PF07813 LTXXQ motif family protein 21 116 2.7E-6 T 18-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 SHALO_2701 59a7adafbfa0cd29df05895049fce445 304 SUPERFAMILY SSF52980 181 271 5.63E-6 T 18-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 SHALO_2701 59a7adafbfa0cd29df05895049fce445 304 Pfam PF03008 Archaea bacterial proteins of unknown function 146 235 5.1E-14 T 18-10-2018 IPR004256 Domain of unknown function DUF234, DEXX-box ATPase C-terminal SHALO_1968 611b72e29f41a7ea124a5e32a6de12cd 141 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 75 140 3.9E-20 T 18-10-2018 IPR004606 Molybdenum-pterin binding GO:0015689 SHALO_1968 611b72e29f41a7ea124a5e32a6de12cd 141 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 1 68 1.9E-20 T 18-10-2018 IPR004606 Molybdenum-pterin binding GO:0015689 SHALO_1968 611b72e29f41a7ea124a5e32a6de12cd 141 Gene3D G3DSA:2.40.50.100 1 67 6.4E-25 T 18-10-2018 SHALO_1968 611b72e29f41a7ea124a5e32a6de12cd 141 Gene3D G3DSA:2.40.50.100 73 139 3.6E-23 T 18-10-2018 SHALO_1968 611b72e29f41a7ea124a5e32a6de12cd 141 SUPERFAMILY SSF50331 1 68 7.53E-19 T 18-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal SHALO_1968 611b72e29f41a7ea124a5e32a6de12cd 141 Pfam PF03459 TOBE domain 4 65 4.5E-12 T 18-10-2018 IPR005116 Transport-associated OB, type 1 SHALO_1968 611b72e29f41a7ea124a5e32a6de12cd 141 Pfam PF03459 TOBE domain 76 137 4.9E-16 T 18-10-2018 IPR005116 Transport-associated OB, type 1 SHALO_1968 611b72e29f41a7ea124a5e32a6de12cd 141 SUPERFAMILY SSF50331 74 140 1.25E-18 T 18-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal SHALO_1159 72d69761042eaad61b81396e5f003bce 360 SMART SM01204 201 343 1.2E-17 T 18-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 SHALO_1159 72d69761042eaad61b81396e5f003bce 360 Pfam PF08495 FIST N domain 51 199 4.4E-16 T 18-10-2018 IPR013702 FIST domain, N-terminal SHALO_1159 72d69761042eaad61b81396e5f003bce 360 Pfam PF10442 FIST C domain 201 341 6.5E-18 T 18-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 SHALO_1159 72d69761042eaad61b81396e5f003bce 360 SMART SM00897 30 200 3.1E-9 T 18-10-2018 IPR013702 FIST domain, N-terminal SHALO_0013 867e1f68cecda1afac5e50ade5804e29 392 Gene3D G3DSA:1.20.1720.10 10 381 3.3E-88 T 18-10-2018 SHALO_0013 867e1f68cecda1afac5e50ade5804e29 392 Pfam PF07690 Major Facilitator Superfamily 15 348 4.4E-36 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SHALO_0013 867e1f68cecda1afac5e50ade5804e29 392 ProSitePatterns PS00216 Sugar transport proteins signature 1. 64 80 - T 18-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 SHALO_0013 867e1f68cecda1afac5e50ade5804e29 392 SUPERFAMILY SSF103473 8 380 4.32E-56 T 18-10-2018 IPR036259 MFS transporter superfamily SHALO_0013 867e1f68cecda1afac5e50ade5804e29 392 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 9 375 7.6E-81 T 18-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 SHALO_1273 0198410a6f0bee12bf8a5beba2d3f03b 153 Pfam PF00072 Response regulator receiver domain 3 80 7.9E-11 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_1273 0198410a6f0bee12bf8a5beba2d3f03b 153 SUPERFAMILY SSF52172 2 88 1.99E-15 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_1273 0198410a6f0bee12bf8a5beba2d3f03b 153 Gene3D G3DSA:3.40.50.2300 1 98 3.1E-15 T 18-10-2018 SHALO_1353 98f5996add372f458a35a064ea6201aa 144 SUPERFAMILY SSF55021 74 140 7.75E-9 T 18-10-2018 SHALO_1353 98f5996add372f458a35a064ea6201aa 144 SUPERFAMILY SSF55021 5 71 1.79E-14 T 18-10-2018 SHALO_1353 98f5996add372f458a35a064ea6201aa 144 Gene3D G3DSA:3.30.2130.10 2 144 6.0E-43 T 18-10-2018 SHALO_2551 e35cc5e6e058d297e100d7b2b54e5d7c 249 Pfam PF03824 High-affinity nickel-transport protein 39 139 7.1E-14 T 18-10-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 SHALO_0423 42ec83e48b7ba9acb81ccaa38cacd4a2 234 SUPERFAMILY SSF47413 3 63 2.68E-10 T 18-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 SHALO_0423 42ec83e48b7ba9acb81ccaa38cacd4a2 234 Pfam PF01381 Helix-turn-helix 4 56 9.9E-10 T 18-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SHALO_0423 42ec83e48b7ba9acb81ccaa38cacd4a2 234 SMART SM00530 2 57 5.0E-7 T 18-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SHALO_0423 42ec83e48b7ba9acb81ccaa38cacd4a2 234 Gene3D G3DSA:1.10.260.40 2 74 2.2E-11 T 18-10-2018 SHALO_0208 5cadd79c3fbae5a43836755877454646 66 Gene3D G3DSA:2.30.170.50 1 66 1.5E-31 T 18-10-2018 SHALO_0208 5cadd79c3fbae5a43836755877454646 66 ProSitePatterns PS01143 Ribosomal protein L31 signature. 34 55 - T 18-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_0208 5cadd79c3fbae5a43836755877454646 66 SUPERFAMILY SSF143800 1 64 1.41E-25 T 18-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_0208 5cadd79c3fbae5a43836755877454646 66 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 66 29.411 T 18-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_0208 5cadd79c3fbae5a43836755877454646 66 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 65 3.1E-31 T 18-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_0208 5cadd79c3fbae5a43836755877454646 66 PRINTS PR01249 Ribosomal protein L31 signature 2 19 5.1E-23 T 18-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_0208 5cadd79c3fbae5a43836755877454646 66 PRINTS PR01249 Ribosomal protein L31 signature 45 63 5.1E-23 T 18-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_0208 5cadd79c3fbae5a43836755877454646 66 PRINTS PR01249 Ribosomal protein L31 signature 30 45 5.1E-23 T 18-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_0208 5cadd79c3fbae5a43836755877454646 66 Pfam PF01197 Ribosomal protein L31 1 63 1.6E-31 T 18-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_0453 b9bf09a93914c0dfe4ed1e7faf5e2fcf 137 Gene3D G3DSA:3.10.450.50 1 135 1.4E-32 T 18-10-2018 SHALO_0453 b9bf09a93914c0dfe4ed1e7faf5e2fcf 137 Pfam PF07366 SnoaL-like polyketide cyclase 10 132 5.6E-30 T 18-10-2018 IPR009959 Polyketide cyclase SnoaL-like GO:0030638 MetaCyc: PWY-7352|MetaCyc: PWY-7354 SHALO_0453 b9bf09a93914c0dfe4ed1e7faf5e2fcf 137 SUPERFAMILY SSF54427 2 134 4.05E-34 T 18-10-2018 IPR032710 NTF2-like domain superfamily SHALO_0637 a20c9b4eb55dda95b62faafb5fecd6a3 255 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_0637 a20c9b4eb55dda95b62faafb5fecd6a3 255 SUPERFAMILY SSF52540 2 251 3.16E-65 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0637 a20c9b4eb55dda95b62faafb5fecd6a3 255 Pfam PF00005 ABC transporter 19 178 2.7E-32 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_0637 a20c9b4eb55dda95b62faafb5fecd6a3 255 Gene3D G3DSA:3.40.50.300 1 250 1.3E-64 T 18-10-2018 SHALO_0637 a20c9b4eb55dda95b62faafb5fecd6a3 255 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 228 250 1.8E-6 T 18-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal SHALO_0637 a20c9b4eb55dda95b62faafb5fecd6a3 255 SMART SM00382 27 237 7.1E-8 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_1508 6616183acf8f74c1c95f56dc67fabaaf 392 Gene3D G3DSA:3.40.640.10 74 288 2.2E-68 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 SHALO_1508 6616183acf8f74c1c95f56dc67fabaaf 392 Gene3D G3DSA:3.90.1150.10 289 384 2.2E-68 T 18-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 SHALO_1508 6616183acf8f74c1c95f56dc67fabaaf 392 Pfam PF00155 Aminotransferase class I and II 79 377 4.2E-35 T 18-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SHALO_1508 6616183acf8f74c1c95f56dc67fabaaf 392 SUPERFAMILY SSF53383 71 387 1.11E-51 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase SHALO_1394 4a9e9b3646e333275d62fe2005b48f8e 571 SMART SM00729 291 545 5.9E-5 T 18-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 SHALO_1394 4a9e9b3646e333275d62fe2005b48f8e 571 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 2 560 49.265 T 18-10-2018 IPR022946 Uncharacterised protein family UPF0313 SHALO_1394 4a9e9b3646e333275d62fe2005b48f8e 571 Gene3D G3DSA:3.80.30.20 291 559 1.3E-16 T 18-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe SHALO_1394 4a9e9b3646e333275d62fe2005b48f8e 571 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 2 558 4.1E-242 T 18-10-2018 IPR022946 Uncharacterised protein family UPF0313 SHALO_1394 4a9e9b3646e333275d62fe2005b48f8e 571 Pfam PF08497 Radical SAM N-terminal 2 294 5.2E-117 T 18-10-2018 IPR013704 Uncharacterised protein family UPF0313, N-terminal SHALO_1394 4a9e9b3646e333275d62fe2005b48f8e 571 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 295 315 - T 18-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 SHALO_1394 4a9e9b3646e333275d62fe2005b48f8e 571 Pfam PF04055 Radical SAM superfamily 296 503 5.5E-17 T 18-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 SHALO_1394 4a9e9b3646e333275d62fe2005b48f8e 571 SUPERFAMILY SSF102114 295 537 2.55E-12 T 18-10-2018 SHALO_0887 e61a7ea5d0b20049514fa8644c198fe1 454 Gene3D G3DSA:3.40.50.1820 43 249 6.2E-8 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold SHALO_0887 e61a7ea5d0b20049514fa8644c198fe1 454 SUPERFAMILY SSF53474 50 413 7.84E-14 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold SHALO_2557 b9dfb6a25586142e6937f5a3d73fa7b0 271 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 265 2.1E-75 T 18-10-2018 IPR010099 Epimerase family protein SDR39U1 SHALO_2557 b9dfb6a25586142e6937f5a3d73fa7b0 271 Pfam PF01370 NAD dependent epimerase/dehydratase family 30 189 8.0E-11 T 18-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 SHALO_2557 b9dfb6a25586142e6937f5a3d73fa7b0 271 Pfam PF08338 Domain of unknown function (DUF1731) 223 269 2.0E-15 T 18-10-2018 IPR013549 Domain of unknown function DUF1731 SHALO_2557 b9dfb6a25586142e6937f5a3d73fa7b0 271 SUPERFAMILY SSF51735 1 269 2.14E-31 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_2557 b9dfb6a25586142e6937f5a3d73fa7b0 271 Gene3D G3DSA:3.40.50.720 2 271 2.0E-59 T 18-10-2018 SHALO_2214 fd40e1f158a5d0447e5131c55b57349f 376 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 284 6.3E-46 T 18-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 SHALO_2214 fd40e1f158a5d0447e5131c55b57349f 376 Gene3D G3DSA:3.40.50.720 7 139 9.7E-32 T 18-10-2018 SHALO_2214 fd40e1f158a5d0447e5131c55b57349f 376 Gene3D G3DSA:3.90.25.10 215 351 2.4E-49 T 18-10-2018 SHALO_2214 fd40e1f158a5d0447e5131c55b57349f 376 Gene3D G3DSA:3.40.50.720 173 339 2.4E-49 T 18-10-2018 SHALO_2214 fd40e1f158a5d0447e5131c55b57349f 376 SUPERFAMILY SSF51735 2 358 2.29E-77 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_1868 bceea2d468edde694573171495a4310b 671 Pfam PF00593 TonB dependent receptor 281 670 6.4E-40 T 18-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel SHALO_1868 bceea2d468edde694573171495a4310b 671 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 654 671 - T 18-10-2018 IPR010917 TonB-dependent receptor, conserved site SHALO_1868 bceea2d468edde694573171495a4310b 671 Gene3D G3DSA:2.40.170.20 38 671 1.0E-118 T 18-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily SHALO_1868 bceea2d468edde694573171495a4310b 671 SUPERFAMILY SSF56935 28 671 7.33E-104 T 18-10-2018 SHALO_1868 bceea2d468edde694573171495a4310b 671 Pfam PF07715 TonB-dependent Receptor Plug Domain 45 157 1.7E-12 T 18-10-2018 IPR012910 TonB-dependent receptor, plug domain SHALO_1595 730bad8e934895f5220c2d702cd88cd0 259 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 3 257 5.6E-93 T 18-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 SHALO_1595 730bad8e934895f5220c2d702cd88cd0 259 SUPERFAMILY SSF63892 2 258 1.27E-83 T 18-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 SHALO_1595 730bad8e934895f5220c2d702cd88cd0 259 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 259 97.16 T 18-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 SHALO_1595 730bad8e934895f5220c2d702cd88cd0 259 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 3 258 1.8E-88 T 18-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 SHALO_1595 730bad8e934895f5220c2d702cd88cd0 259 Gene3D G3DSA:3.20.20.70 1 259 5.2E-97 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_2915 c63f5e6361499489851f4b0165ec308c 231 Gene3D G3DSA:3.40.50.150 37 226 4.8E-40 T 18-10-2018 SHALO_2915 c63f5e6361499489851f4b0165ec308c 231 Pfam PF13578 Methyltransferase domain 86 190 7.9E-19 T 18-10-2018 SHALO_2915 c63f5e6361499489851f4b0165ec308c 231 SUPERFAMILY SSF53335 65 212 3.68E-31 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_0854 a9b8c83fc81ac769f29fb2cc5a53e17c 548 SUPERFAMILY SSF53187 325 544 4.08E-48 T 18-10-2018 SHALO_0854 a9b8c83fc81ac769f29fb2cc5a53e17c 548 Gene3D G3DSA:3.40.630.40 313 548 8.2E-70 T 18-10-2018 SHALO_0854 a9b8c83fc81ac769f29fb2cc5a53e17c 548 SMART SM00646 386 541 2.5E-41 T 18-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 SHALO_0854 a9b8c83fc81ac769f29fb2cc5a53e17c 548 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 327 541 3.5E-46 T 18-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 SHALO_1344 4763424ee1d2c3ad2babf8b8e25a4ebe 209 Pfam PF00881 Nitroreductase family 10 188 3.0E-32 T 18-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 SHALO_1344 4763424ee1d2c3ad2babf8b8e25a4ebe 209 SUPERFAMILY SSF55469 4 206 1.27E-56 T 18-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 SHALO_1344 4763424ee1d2c3ad2babf8b8e25a4ebe 209 Gene3D G3DSA:3.40.109.10 3 207 3.4E-57 T 18-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 SHALO_0456 1a07a512759817a1b23e740c03ce5236 251 SUPERFAMILY SSF51735 3 233 1.52E-60 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_0456 1a07a512759817a1b23e740c03ce5236 251 PIRSF PIRSF000126 1 236 8.7E-52 T 18-10-2018 SHALO_0456 1a07a512759817a1b23e740c03ce5236 251 Gene3D G3DSA:3.40.50.720 1 242 8.2E-64 T 18-10-2018 SHALO_0456 1a07a512759817a1b23e740c03ce5236 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 1.9E-8 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_0456 1a07a512759817a1b23e740c03ce5236 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 1.9E-8 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_0456 1a07a512759817a1b23e740c03ce5236 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 1.9E-8 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_0456 1a07a512759817a1b23e740c03ce5236 251 Pfam PF00106 short chain dehydrogenase 3 189 5.7E-54 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_0456 1a07a512759817a1b23e740c03ce5236 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 18-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SHALO_0456 1a07a512759817a1b23e740c03ce5236 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 3.4E-21 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_0456 1a07a512759817a1b23e740c03ce5236 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.4E-21 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_0456 1a07a512759817a1b23e740c03ce5236 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 3.4E-21 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_0456 1a07a512759817a1b23e740c03ce5236 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 3.4E-21 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_0456 1a07a512759817a1b23e740c03ce5236 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 3.4E-21 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_2396 d42164e8b214ae94745f9ec53af23e04 284 SUPERFAMILY SSF55681 5 279 1.73E-33 T 18-10-2018 SHALO_2396 d42164e8b214ae94745f9ec53af23e04 284 Gene3D G3DSA:3.30.930.10 3 282 2.4E-33 T 18-10-2018 SHALO_2396 d42164e8b214ae94745f9ec53af23e04 284 Pfam PF13393 Histidyl-tRNA synthetase 18 259 1.8E-18 T 18-10-2018 SHALO_1080 29640c6c554837219e6851e4e2f76ffb 196 Gene3D G3DSA:3.40.50.10420 19 196 8.1E-23 T 18-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily SHALO_1080 29640c6c554837219e6851e4e2f76ffb 196 Pfam PF02589 LUD domain 96 196 1.9E-16 T 18-10-2018 IPR003741 LUD domain SHALO_1080 29640c6c554837219e6851e4e2f76ffb 196 SUPERFAMILY SSF100950 32 196 6.28E-31 T 18-10-2018 IPR037171 NagB/RpiA transferase-like SHALO_2756 af30d857445d5e46c52d83cd56a93683 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 246 1.6E-47 T 18-10-2018 SHALO_2756 af30d857445d5e46c52d83cd56a93683 249 SUPERFAMILY SSF51735 8 248 5.75E-63 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_2756 af30d857445d5e46c52d83cd56a93683 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 5.0E-25 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_2756 af30d857445d5e46c52d83cd56a93683 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 5.0E-25 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_2756 af30d857445d5e46c52d83cd56a93683 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 5.0E-25 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_2756 af30d857445d5e46c52d83cd56a93683 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 5.0E-25 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_2756 af30d857445d5e46c52d83cd56a93683 249 Gene3D G3DSA:3.40.50.720 1 248 2.0E-61 T 18-10-2018 SHALO_0946 e0ae30c1fd2e78b188fb85a4932d3eaf 447 Gene3D G3DSA:2.40.160.10 18 447 9.1E-28 T 18-10-2018 IPR023614 Porin domain superfamily SHALO_0946 e0ae30c1fd2e78b188fb85a4932d3eaf 447 Pfam PF03573 outer membrane porin, OprD family 123 446 3.1E-10 T 18-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 SHALO_0442 5fde9cbd1e0acd305960bd6174c4f62a 246 Pfam PF01738 Dienelactone hydrolase family 34 242 6.1E-35 T 18-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 SHALO_0442 5fde9cbd1e0acd305960bd6174c4f62a 246 SUPERFAMILY SSF53474 24 244 3.12E-34 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold SHALO_0442 5fde9cbd1e0acd305960bd6174c4f62a 246 Gene3D G3DSA:3.40.50.1820 18 245 9.3E-43 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold SHALO_0964 0136cf7e3cab13885fd89254f4e22ba3 247 SMART SM00450 147 245 6.5E-11 T 18-10-2018 IPR001763 Rhodanese-like domain SHALO_0964 0136cf7e3cab13885fd89254f4e22ba3 247 SUPERFAMILY SSF52821 134 239 1.31E-16 T 18-10-2018 IPR036873 Rhodanese-like domain superfamily SHALO_0964 0136cf7e3cab13885fd89254f4e22ba3 247 Gene3D G3DSA:3.90.460.10 11 122 3.7E-18 T 18-10-2018 IPR036644 Ferredoxin thioredoxin reductase catalytic beta subunit superfamily GO:0016730|GO:0055114 SHALO_0964 0136cf7e3cab13885fd89254f4e22ba3 247 Pfam PF00581 Rhodanese-like domain 148 240 1.3E-10 T 18-10-2018 IPR001763 Rhodanese-like domain SHALO_0964 0136cf7e3cab13885fd89254f4e22ba3 247 SUPERFAMILY SSF57662 15 118 7.19E-22 T 18-10-2018 IPR036644 Ferredoxin thioredoxin reductase catalytic beta subunit superfamily GO:0016730|GO:0055114 SHALO_0964 0136cf7e3cab13885fd89254f4e22ba3 247 Gene3D G3DSA:3.40.250.10 123 247 3.8E-16 T 18-10-2018 IPR036873 Rhodanese-like domain superfamily SHALO_0964 0136cf7e3cab13885fd89254f4e22ba3 247 Pfam PF02943 Ferredoxin thioredoxin reductase catalytic beta chain 16 121 2.1E-33 T 18-10-2018 IPR004209 Ferredoxin thioredoxin reductase catalytic beta subunit GO:0016730|GO:0055114 SHALO_1848 67e44908b856c5b35e2517e434ebc024 344 Pfam PF02625 XdhC and CoxI family 13 75 4.1E-16 T 18-10-2018 IPR003777 XdhC- CoxI SHALO_1848 67e44908b856c5b35e2517e434ebc024 344 Gene3D G3DSA:3.40.50.720 195 344 1.0E-46 T 18-10-2018 SHALO_1848 67e44908b856c5b35e2517e434ebc024 344 Pfam PF13478 XdhC Rossmann domain 196 338 1.4E-39 T 18-10-2018 IPR027051 XdhC Rossmann domain SHALO_2742 cc40bec37b57230a908757eeb956b502 246 Pfam PF00005 ABC transporter 19 168 1.6E-31 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_2742 cc40bec37b57230a908757eeb956b502 246 SMART SM00382 28 218 8.7E-14 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_2742 cc40bec37b57230a908757eeb956b502 246 Gene3D G3DSA:3.40.50.300 1 229 1.5E-59 T 18-10-2018 SHALO_2742 cc40bec37b57230a908757eeb956b502 246 SUPERFAMILY SSF52540 3 216 6.78E-61 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_2742 cc40bec37b57230a908757eeb956b502 246 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_2937 37917869e1da5668526536ab652d09eb 88 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 3 86 3.8E-29 T 18-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 SHALO_2937 37917869e1da5668526536ab652d09eb 88 PIRSF PIRSF004669 1 88 1.6E-28 T 18-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 SHALO_2937 37917869e1da5668526536ab652d09eb 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 38 53 2.2E-20 T 18-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 SHALO_2937 37917869e1da5668526536ab652d09eb 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 53 75 2.2E-20 T 18-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 SHALO_2937 37917869e1da5668526536ab652d09eb 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 17 38 2.2E-20 T 18-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 SHALO_2937 37917869e1da5668526536ab652d09eb 88 Pfam PF01313 Bacterial export proteins, family 3 6 76 1.4E-27 T 18-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 SHALO_2655 7e511fdfb047ec2c7a215376d6d916d2 299 Pfam PF01292 Prokaryotic cytochrome b561 94 275 9.8E-17 T 18-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 SHALO_2655 7e511fdfb047ec2c7a215376d6d916d2 299 Gene3D G3DSA:1.20.950.20 86 298 2.1E-52 T 18-10-2018 SHALO_2655 7e511fdfb047ec2c7a215376d6d916d2 299 SUPERFAMILY SSF81342 88 298 1.57E-38 T 18-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 SHALO_2655 7e511fdfb047ec2c7a215376d6d916d2 299 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 91 294 1.4E-63 T 18-10-2018 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 SHALO_1048 c3461d9e3f9b398b436872dd39a6f7f9 90 Gene3D G3DSA:3.30.2310.20 1 90 1.8E-35 T 18-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily SHALO_1048 c3461d9e3f9b398b436872dd39a6f7f9 90 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 3 90 1.6E-24 T 18-10-2018 IPR007711 Toxin HigB-1 SHALO_1048 c3461d9e3f9b398b436872dd39a6f7f9 90 SUPERFAMILY SSF143011 1 88 4.84E-14 T 18-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily SHALO_1171 50d601e3a0b5dd4f9815e4295eff77e6 340 Pfam PF00925 GTP cyclohydrolase II 194 337 3.7E-9 T 18-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 SHALO_1171 50d601e3a0b5dd4f9815e4295eff77e6 340 Gene3D G3DSA:3.40.50.10990 216 340 3.3E-5 T 18-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 SHALO_1171 50d601e3a0b5dd4f9815e4295eff77e6 340 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 8 197 2.7E-80 T 18-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 SHALO_1171 50d601e3a0b5dd4f9815e4295eff77e6 340 Gene3D G3DSA:3.90.870.10 1 210 4.7E-82 T 18-10-2018 SHALO_1171 50d601e3a0b5dd4f9815e4295eff77e6 340 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 202 37.173 T 18-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 SHALO_1171 50d601e3a0b5dd4f9815e4295eff77e6 340 SUPERFAMILY SSF142695 215 336 2.75E-14 T 18-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 SHALO_1171 50d601e3a0b5dd4f9815e4295eff77e6 340 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 3 198 6.5E-75 T 18-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 SHALO_1171 50d601e3a0b5dd4f9815e4295eff77e6 340 PIRSF PIRSF001259 258 340 6.6E-9 T 18-10-2018 SHALO_1171 50d601e3a0b5dd4f9815e4295eff77e6 340 PIRSF PIRSF001259 2 253 1.4E-76 T 18-10-2018 SHALO_1171 50d601e3a0b5dd4f9815e4295eff77e6 340 SUPERFAMILY SSF55821 2 201 3.89E-79 T 18-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily SHALO_0764 f26d36c0214e5b4ba52455aeebde5862 486 Pfam PF00890 FAD binding domain 6 372 6.7E-82 T 18-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_0764 f26d36c0214e5b4ba52455aeebde5862 486 SUPERFAMILY SSF46977 412 479 6.02E-12 T 18-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_0764 f26d36c0214e5b4ba52455aeebde5862 486 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 4 482 6.6E-148 T 18-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 SHALO_0764 f26d36c0214e5b4ba52455aeebde5862 486 SUPERFAMILY SSF56425 217 331 3.44E-34 T 18-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_0764 f26d36c0214e5b4ba52455aeebde5862 486 Gene3D G3DSA:3.90.700.10 227 326 1.3E-124 T 18-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_0764 f26d36c0214e5b4ba52455aeebde5862 486 SUPERFAMILY SSF51905 2 400 2.56E-51 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SHALO_0764 f26d36c0214e5b4ba52455aeebde5862 486 Gene3D G3DSA:3.50.50.60 6 383 1.3E-124 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SHALO_0764 f26d36c0214e5b4ba52455aeebde5862 486 Gene3D G3DSA:1.20.58.100 398 482 9.2E-12 T 18-10-2018 SHALO_0744 ad0f305a5055d23b5185bac6effe90a6 180 SUPERFAMILY SSF56747 3 178 1.24E-89 T 18-10-2018 SHALO_0744 ad0f305a5055d23b5185bac6effe90a6 180 Pfam PF08966 Domain of unknown function (DUF1882) 1 73 2.0E-35 T 18-10-2018 IPR015061 Domain of unknown function DUF1882 SHALO_0744 ad0f305a5055d23b5185bac6effe90a6 180 Gene3D G3DSA:3.90.920.20 1 180 9.5E-81 T 18-10-2018 SHALO_2165 d8a3f98ec306c6e98901acbfe03e23c7 249 Gene3D G3DSA:3.40.190.10 99 207 2.0E-63 T 18-10-2018 SHALO_2165 d8a3f98ec306c6e98901acbfe03e23c7 249 SUPERFAMILY SSF53850 19 246 3.35E-52 T 18-10-2018 SHALO_2165 d8a3f98ec306c6e98901acbfe03e23c7 249 Gene3D G3DSA:3.40.190.10 24 245 2.0E-63 T 18-10-2018 SHALO_2165 d8a3f98ec306c6e98901acbfe03e23c7 249 PIRSF PIRSF004846 1 249 1.2E-47 T 18-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 SHALO_2165 d8a3f98ec306c6e98901acbfe03e23c7 249 Pfam PF13531 Bacterial extracellular solute-binding protein 20 245 4.3E-41 T 18-10-2018 SHALO_2165 d8a3f98ec306c6e98901acbfe03e23c7 249 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 25 244 2.9E-55 T 18-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 SHALO_0932 ab97cee548ef95b4ab19b425ede9ed5f 378 SUPERFAMILY SSF51690 115 370 2.86E-31 T 18-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 SHALO_0932 ab97cee548ef95b4ab19b425ede9ed5f 378 Gene3D G3DSA:3.20.20.70 106 347 2.5E-22 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_0932 ab97cee548ef95b4ab19b425ede9ed5f 378 SUPERFAMILY SSF54675 10 107 1.31E-6 T 18-10-2018 SHALO_2580 2e4c1c31f1eb9fe8e6647272526ca2da 267 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 14 267 17.24 T 18-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 SHALO_2580 2e4c1c31f1eb9fe8e6647272526ca2da 267 Pfam PF02673 Bacitracin resistance protein BacA 20 262 1.9E-71 T 18-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 SHALO_2147 e7ae4ea2ce5a3cc319596c65e8ba4f87 405 SUPERFAMILY SSF55073 241 403 1.1E-33 T 18-10-2018 IPR029787 Nucleotide cyclase SHALO_2147 e7ae4ea2ce5a3cc319596c65e8ba4f87 405 Pfam PF00990 Diguanylate cyclase, GGDEF domain 236 400 1.3E-30 T 18-10-2018 IPR000160 GGDEF domain SHALO_2147 e7ae4ea2ce5a3cc319596c65e8ba4f87 405 SMART SM00267 226 405 2.6E-33 T 18-10-2018 IPR000160 GGDEF domain SHALO_2147 e7ae4ea2ce5a3cc319596c65e8ba4f87 405 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 234 402 6.1E-34 T 18-10-2018 IPR000160 GGDEF domain SHALO_2147 e7ae4ea2ce5a3cc319596c65e8ba4f87 405 Gene3D G3DSA:3.30.70.270 227 404 4.5E-43 T 18-10-2018 SHALO_1277 3cff8ddcb895bebdd3863c411affd4e2 144 Pfam PF07681 DoxX 14 94 5.1E-17 T 18-10-2018 IPR032808 DoxX family SHALO_2759 58d9f77d5e007a582c4cf39c9670a948 275 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 18-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SHALO_2759 58d9f77d5e007a582c4cf39c9670a948 275 Gene3D G3DSA:3.40.50.720 2 256 1.4E-64 T 18-10-2018 SHALO_2759 58d9f77d5e007a582c4cf39c9670a948 275 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 1.5E-6 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_2759 58d9f77d5e007a582c4cf39c9670a948 275 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 1.5E-6 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_2759 58d9f77d5e007a582c4cf39c9670a948 275 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 134 1.5E-6 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_2759 58d9f77d5e007a582c4cf39c9670a948 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 6.9E-20 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_2759 58d9f77d5e007a582c4cf39c9670a948 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 6.9E-20 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_2759 58d9f77d5e007a582c4cf39c9670a948 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 6.9E-20 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_2759 58d9f77d5e007a582c4cf39c9670a948 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 6.9E-20 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_2759 58d9f77d5e007a582c4cf39c9670a948 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 6.9E-20 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_2759 58d9f77d5e007a582c4cf39c9670a948 275 SUPERFAMILY SSF51735 3 270 5.35E-58 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_2759 58d9f77d5e007a582c4cf39c9670a948 275 Pfam PF00106 short chain dehydrogenase 3 187 8.6E-43 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_0293 83c24d0d0ed1aed5d482b3851e72c78e 885 SUPERFAMILY SSF52540 378 556 1.04E-52 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0293 83c24d0d0ed1aed5d482b3851e72c78e 885 Pfam PF11987 Translation-initiation factor 2 671 774 3.8E-35 T 18-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 SHALO_0293 83c24d0d0ed1aed5d482b3851e72c78e 885 Gene3D G3DSA:1.10.10.2480 1 66 1.5E-15 T 18-10-2018 SHALO_0293 83c24d0d0ed1aed5d482b3851e72c78e 885 Gene3D G3DSA:3.40.50.10050 678 786 1.1E-35 T 18-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily SHALO_0293 83c24d0d0ed1aed5d482b3851e72c78e 885 PRINTS PR00449 Transforming protein P21 ras signature 426 448 4.4E-5 T 18-10-2018 SHALO_0293 83c24d0d0ed1aed5d482b3851e72c78e 885 PRINTS PR00449 Transforming protein P21 ras signature 387 408 4.4E-5 T 18-10-2018 SHALO_0293 83c24d0d0ed1aed5d482b3851e72c78e 885 PRINTS PR00449 Transforming protein P21 ras signature 525 547 4.4E-5 T 18-10-2018 SHALO_0293 83c24d0d0ed1aed5d482b3851e72c78e 885 PRINTS PR00449 Transforming protein P21 ras signature 484 497 4.4E-5 T 18-10-2018 SHALO_0293 83c24d0d0ed1aed5d482b3851e72c78e 885 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 883 16.653 T 18-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 SHALO_0293 83c24d0d0ed1aed5d482b3851e72c78e 885 Gene3D G3DSA:3.40.50.300 381 555 2.0E-70 T 18-10-2018 SHALO_0293 83c24d0d0ed1aed5d482b3851e72c78e 885 SUPERFAMILY SSF52156 661 792 3.01E-34 T 18-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily SHALO_0293 83c24d0d0ed1aed5d482b3851e72c78e 885 Gene3D G3DSA:2.40.30.10 787 883 3.6E-32 T 18-10-2018 SHALO_0293 83c24d0d0ed1aed5d482b3851e72c78e 885 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 300 882 2.0E-252 T 18-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 SHALO_0293 83c24d0d0ed1aed5d482b3851e72c78e 885 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 305 354 3.0E-14 T 18-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal SHALO_0293 83c24d0d0ed1aed5d482b3851e72c78e 885 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 49 1.2E-13 T 18-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal SHALO_0293 83c24d0d0ed1aed5d482b3851e72c78e 885 SUPERFAMILY SSF50447 557 639 1.69E-22 T 18-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily SHALO_0293 83c24d0d0ed1aed5d482b3851e72c78e 885 SUPERFAMILY SSF50447 787 882 5.11E-30 T 18-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily SHALO_0293 83c24d0d0ed1aed5d482b3851e72c78e 885 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 387 543 7.3E-36 T 18-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 SHALO_0293 83c24d0d0ed1aed5d482b3851e72c78e 885 Gene3D G3DSA:2.40.30.10 556 674 2.5E-36 T 18-10-2018 SHALO_0293 83c24d0d0ed1aed5d482b3851e72c78e 885 Pfam PF00009 Elongation factor Tu GTP binding domain 388 544 3.6E-35 T 18-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHALO_0293 83c24d0d0ed1aed5d482b3851e72c78e 885 ProSitePatterns PS01176 Initiation factor 2 signature. 836 858 - T 18-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 SHALO_1573 ad70466a460ac06875cb2867e20a8d64 384 SUPERFAMILY SSF161098 172 365 2.49E-26 T 18-10-2018 IPR035906 MetI-like superfamily SHALO_1573 ad70466a460ac06875cb2867e20a8d64 384 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 206 380 1.3E-12 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 SHALO_1573 ad70466a460ac06875cb2867e20a8d64 384 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 75 137 1.5E-15 T 18-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 SHALO_1573 ad70466a460ac06875cb2867e20a8d64 384 SUPERFAMILY SSF161098 75 140 1.44E-13 T 18-10-2018 IPR035906 MetI-like superfamily SHALO_1573 ad70466a460ac06875cb2867e20a8d64 384 Gene3D G3DSA:1.10.3720.10 63 165 3.6E-15 T 18-10-2018 IPR035906 MetI-like superfamily SHALO_1573 ad70466a460ac06875cb2867e20a8d64 384 Gene3D G3DSA:1.10.3720.10 166 381 8.1E-33 T 18-10-2018 IPR035906 MetI-like superfamily SHALO_0871 8d80e6f22d81698069d8f1e77ba5394e 200 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 12 195 27.721 T 18-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 SHALO_0871 8d80e6f22d81698069d8f1e77ba5394e 200 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 9 189 3.3E-54 T 18-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 SHALO_0871 8d80e6f22d81698069d8f1e77ba5394e 200 SUPERFAMILY SSF52540 9 194 1.74E-30 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0871 8d80e6f22d81698069d8f1e77ba5394e 200 Pfam PF01926 50S ribosome-binding GTPase 26 154 7.1E-21 T 18-10-2018 IPR006073 GTP binding domain GO:0005525 SHALO_0871 8d80e6f22d81698069d8f1e77ba5394e 200 Gene3D G3DSA:3.40.50.300 1 198 3.4E-45 T 18-10-2018 SHALO_1535 713c15ecdeea0ad58d6c795760b790e5 139 SUPERFAMILY SSF50022 41 137 1.57E-13 T 18-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 SHALO_1535 713c15ecdeea0ad58d6c795760b790e5 139 Pfam PF00355 Rieske [2Fe-2S] domain 45 126 2.9E-7 T 18-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 SHALO_1535 713c15ecdeea0ad58d6c795760b790e5 139 Gene3D G3DSA:2.102.10.10 36 138 1.1E-12 T 18-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 SHALO_1774 2b0546e65126b905f0a72c0a6ba304ea 265 Pfam PF13401 AAA domain 44 154 8.3E-13 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_1774 2b0546e65126b905f0a72c0a6ba304ea 265 Gene3D G3DSA:3.40.50.300 13 164 2.5E-8 T 18-10-2018 SHALO_1774 2b0546e65126b905f0a72c0a6ba304ea 265 SUPERFAMILY SSF52540 31 235 1.8E-19 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_1774 2b0546e65126b905f0a72c0a6ba304ea 265 SMART SM00382 41 178 2.8E-6 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_0973 a043797dd2c839d89bda567810eb04ea 168 Pfam PF00355 Rieske [2Fe-2S] domain 49 142 7.5E-12 T 18-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 SHALO_0973 a043797dd2c839d89bda567810eb04ea 168 Gene3D G3DSA:2.102.10.10 39 154 3.8E-29 T 18-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 SHALO_0973 a043797dd2c839d89bda567810eb04ea 168 SUPERFAMILY SSF50022 29 155 4.19E-28 T 18-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 SHALO_0973 a043797dd2c839d89bda567810eb04ea 168 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 7 43 0.0015 T 18-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal SHALO_0973 a043797dd2c839d89bda567810eb04ea 168 PRINTS PR00162 Rieske 2Fe-2S subunit signature 94 105 9.2E-8 T 18-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 SHALO_0973 a043797dd2c839d89bda567810eb04ea 168 PRINTS PR00162 Rieske 2Fe-2S subunit signature 127 139 9.2E-8 T 18-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 SHALO_0973 a043797dd2c839d89bda567810eb04ea 168 PRINTS PR00162 Rieske 2Fe-2S subunit signature 115 127 9.2E-8 T 18-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 SHALO_2619 dd50070f0674469702b1d8cf9a5ff442 287 Gene3D G3DSA:3.30.70.2050 237 286 3.8E-15 T 18-10-2018 SHALO_2619 dd50070f0674469702b1d8cf9a5ff442 287 Gene3D G3DSA:3.30.70.2050 98 154 8.2E-9 T 18-10-2018 SHALO_2619 dd50070f0674469702b1d8cf9a5ff442 287 Pfam PF05573 NosL 36 138 3.0E-12 T 18-10-2018 IPR008719 Nitrous oxide reductase accessory protein NosL SHALO_2619 dd50070f0674469702b1d8cf9a5ff442 287 Pfam PF05573 NosL 164 284 5.8E-30 T 18-10-2018 IPR008719 Nitrous oxide reductase accessory protein NosL SHALO_2619 dd50070f0674469702b1d8cf9a5ff442 287 SUPERFAMILY SSF160387 189 286 7.59E-26 T 18-10-2018 SHALO_2619 dd50070f0674469702b1d8cf9a5ff442 287 SUPERFAMILY SSF160387 57 150 6.54E-23 T 18-10-2018 SHALO_0818 b5eccc818090f22bc094b6ec7dd76f5f 275 SUPERFAMILY SSF53474 118 254 2.68E-15 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold SHALO_0818 b5eccc818090f22bc094b6ec7dd76f5f 275 Gene3D G3DSA:3.40.50.1820 110 256 1.7E-13 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold SHALO_2523 4f92b558e651cd6041627feaaa957074 315 Pfam PF04773 FecR protein 103 195 5.9E-20 T 18-10-2018 IPR006860 FecR protein SHALO_2523 4f92b558e651cd6041627feaaa957074 315 Pfam PF16220 Domain of unknown function (DUF4880) 9 49 5.6E-8 T 18-10-2018 IPR032623 FecR, N-terminal SHALO_2523 4f92b558e651cd6041627feaaa957074 315 Gene3D G3DSA:2.60.120.1440 86 234 1.2E-21 T 18-10-2018 SHALO_2523 4f92b558e651cd6041627feaaa957074 315 Pfam PF16344 Domain of unknown function (DUF4974) 213 310 2.6E-7 T 18-10-2018 IPR032508 Protein FecR, C-terminal SHALO_2523 4f92b558e651cd6041627feaaa957074 315 Gene3D G3DSA:3.55.50.30 240 315 2.1E-8 T 18-10-2018 SHALO_2523 4f92b558e651cd6041627feaaa957074 315 PIRSF PIRSF018266 2 315 1.7E-74 T 18-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component SHALO_2317 a657466cc5a9836a4ef53f0dbf46e6f3 187 Gene3D G3DSA:1.10.340.30 5 187 1.1E-74 T 18-10-2018 SHALO_2317 a657466cc5a9836a4ef53f0dbf46e6f3 187 SUPERFAMILY SSF48150 6 186 4.08E-71 T 18-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 SHALO_2317 a657466cc5a9836a4ef53f0dbf46e6f3 187 Pfam PF03352 Methyladenine glycosylase 10 185 1.3E-72 T 18-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 SHALO_0412 2b56cd00ae2e5c014104839a227faa11 621 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 91 107 3.9E-13 T 18-10-2018 SHALO_0412 2b56cd00ae2e5c014104839a227faa11 621 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 121 135 3.9E-13 T 18-10-2018 SHALO_0412 2b56cd00ae2e5c014104839a227faa11 621 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 248 272 3.9E-13 T 18-10-2018 SHALO_0412 2b56cd00ae2e5c014104839a227faa11 621 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 213 225 3.9E-13 T 18-10-2018 SHALO_0412 2b56cd00ae2e5c014104839a227faa11 621 Gene3D G3DSA:3.40.50.150 86 358 8.2E-45 T 18-10-2018 SHALO_0412 2b56cd00ae2e5c014104839a227faa11 621 Pfam PF02384 N-6 DNA Methylase 89 343 1.4E-18 T 18-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 SHALO_0412 2b56cd00ae2e5c014104839a227faa11 621 SUPERFAMILY SSF53335 47 355 7.93E-45 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_0412 2b56cd00ae2e5c014104839a227faa11 621 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 216 222 - T 18-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SHALO_0912 69bc81d293c5ae420226c89fbac27b37 423 Gene3D G3DSA:1.10.287.130 166 282 3.1E-11 T 18-10-2018 SHALO_0912 69bc81d293c5ae420226c89fbac27b37 423 Gene3D G3DSA:3.30.565.10 285 421 5.2E-12 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_0912 69bc81d293c5ae420226c89fbac27b37 423 SUPERFAMILY SSF47384 203 265 4.12E-6 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SHALO_0912 69bc81d293c5ae420226c89fbac27b37 423 SUPERFAMILY SSF55874 289 415 2.01E-13 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_0912 69bc81d293c5ae420226c89fbac27b37 423 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 333 413 3.2E-7 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_1956 09fdf1b8395e4944ee48f958423b0f7e 546 Pfam PF00474 Sodium:solute symporter family 59 465 5.8E-113 T 18-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 SHALO_1956 09fdf1b8395e4944ee48f958423b0f7e 546 Gene3D G3DSA:1.20.1730.10 47 543 1.4E-56 T 18-10-2018 IPR038377 Sodium/glucose symporter superfamily SHALO_1956 09fdf1b8395e4944ee48f958423b0f7e 546 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 59 462 1.0E-59 T 18-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 SHALO_1956 09fdf1b8395e4944ee48f958423b0f7e 546 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 174 199 - T 18-10-2018 IPR018212 Sodium/solute symporter, conserved site SHALO_2266 85691baa596431a529d4c59c526e96da 319 Gene3D G3DSA:3.40.190.170 21 319 6.4E-77 T 18-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily SHALO_2266 85691baa596431a529d4c59c526e96da 319 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 28 300 1.5E-40 T 18-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 SHALO_0499 66d727dbda9fccd1a9653c50c0d20353 168 SUPERFAMILY SSF55785 19 106 3.49E-23 T 18-10-2018 IPR035965 PAS domain superfamily SHALO_0499 66d727dbda9fccd1a9653c50c0d20353 168 Gene3D G3DSA:3.30.450.20 5 115 1.3E-19 T 18-10-2018 SHALO_0499 66d727dbda9fccd1a9653c50c0d20353 168 Pfam PF08447 PAS fold 29 106 6.0E-12 T 18-10-2018 IPR013655 PAS fold-3 GO:0005515 SHALO_0499 66d727dbda9fccd1a9653c50c0d20353 168 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 22 108 2.0E-10 T 18-10-2018 IPR000014 PAS domain SHALO_1361 e79c0f738e3227ebf202e00c96077b53 566 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 18 109 6.7E-12 T 18-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 SHALO_1361 e79c0f738e3227ebf202e00c96077b53 566 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 477 550 8.7E-7 T 18-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 SHALO_1361 e79c0f738e3227ebf202e00c96077b53 566 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 225 394 5.3E-39 T 18-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 SHALO_0355 25cb0a4ca6f47fdf41cce35689fb135c 432 TIGRFAM TIGR03804 para_beta_helix: parallel beta-helix repeat 269 297 5.8E-5 T 18-10-2018 IPR022441 Parallel beta-helix repeat-2 Reactome: R-HSA-8951664|Reactome: R-HSA-983168 SHALO_0355 25cb0a4ca6f47fdf41cce35689fb135c 432 SUPERFAMILY SSF51126 42 419 9.08E-56 T 18-10-2018 IPR011050 Pectin lyase fold/virulence factor SHALO_0355 25cb0a4ca6f47fdf41cce35689fb135c 432 Pfam PF05048 Periplasmic copper-binding protein (NosD) 162 393 1.6E-42 T 18-10-2018 IPR007742 Periplasmic copper-binding protein NosD, beta helix domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 SHALO_0355 25cb0a4ca6f47fdf41cce35689fb135c 432 TIGRFAM TIGR04247 NosD_copper_fam: nitrous oxide reductase family maturation protein NosD 44 429 1.1E-119 T 18-10-2018 IPR026464 Nitrous oxide reductase family maturation protein NosD SHALO_0355 25cb0a4ca6f47fdf41cce35689fb135c 432 SMART SM00710 249 274 2700.0 T 18-10-2018 IPR006626 Parallel beta-helix repeat SHALO_0355 25cb0a4ca6f47fdf41cce35689fb135c 432 SMART SM00710 302 323 2300.0 T 18-10-2018 IPR006626 Parallel beta-helix repeat SHALO_0355 25cb0a4ca6f47fdf41cce35689fb135c 432 SMART SM00710 275 296 13.0 T 18-10-2018 IPR006626 Parallel beta-helix repeat SHALO_0355 25cb0a4ca6f47fdf41cce35689fb135c 432 SMART SM00710 98 126 570.0 T 18-10-2018 IPR006626 Parallel beta-helix repeat SHALO_0355 25cb0a4ca6f47fdf41cce35689fb135c 432 SMART SM00710 155 183 640.0 T 18-10-2018 IPR006626 Parallel beta-helix repeat SHALO_0355 25cb0a4ca6f47fdf41cce35689fb135c 432 SMART SM00710 205 226 3600.0 T 18-10-2018 IPR006626 Parallel beta-helix repeat SHALO_0355 25cb0a4ca6f47fdf41cce35689fb135c 432 SMART SM00710 227 248 1700.0 T 18-10-2018 IPR006626 Parallel beta-helix repeat SHALO_0355 25cb0a4ca6f47fdf41cce35689fb135c 432 Gene3D G3DSA:2.160.20.10 37 391 2.1E-27 T 18-10-2018 IPR012334 Pectin lyase fold SHALO_1406 9a25befb97378de34aff23843d503c29 137 Gene3D G3DSA:3.30.70.1150 47 136 3.0E-31 T 18-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal SHALO_1406 9a25befb97378de34aff23843d503c29 137 Pfam PF01402 Ribbon-helix-helix protein, copG family 6 43 6.2E-10 T 18-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 SHALO_1406 9a25befb97378de34aff23843d503c29 137 Hamap MF_00476 Nickel-responsive regulator [nikR]. 4 134 26.675 T 18-10-2018 IPR022988 Nickel-responsive transcriptional regulator NikR GO:0003677|GO:0006355|GO:0010045|GO:0016151 SHALO_1406 9a25befb97378de34aff23843d503c29 137 Gene3D G3DSA:1.10.1220.10 11 46 3.3E-15 T 18-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 SHALO_1406 9a25befb97378de34aff23843d503c29 137 SUPERFAMILY SSF47598 3 50 3.04E-12 T 18-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 SHALO_1406 9a25befb97378de34aff23843d503c29 137 SUPERFAMILY SSF55021 54 131 2.98E-23 T 18-10-2018 SHALO_1406 9a25befb97378de34aff23843d503c29 137 Pfam PF08753 NikR C terminal nickel binding domain 56 130 2.6E-28 T 18-10-2018 IPR014864 Transcription factor, NikR, nickel binding C-terminal SHALO_1757 326bbaf64f16e353372fd37cfb852c4d 159 SUPERFAMILY SSF89562 1 157 3.14E-37 T 18-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily SHALO_1757 326bbaf64f16e353372fd37cfb852c4d 159 Gene3D G3DSA:3.50.30.40 1 159 6.4E-52 T 18-10-2018 SHALO_1757 326bbaf64f16e353372fd37cfb852c4d 159 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 153 2.4E-44 T 18-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 SHALO_1757 326bbaf64f16e353372fd37cfb852c4d 159 Pfam PF03737 Aldolase/RraA 5 152 4.1E-35 T 18-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein SHALO_1732 8af5988b8a65fbc1a6141d3abcd9c168 183 Pfam PF12163 DNA replication regulator 1 179 7.7E-76 T 18-10-2018 IPR021011 DNA replication regulator, HobA SHALO_1732 8af5988b8a65fbc1a6141d3abcd9c168 183 Gene3D G3DSA:3.40.50.11670 1 180 1.6E-61 T 18-10-2018 IPR038381 DNA replication regulator HobA superfamily SHALO_1416 134c8b71cef4b771813eaa9d5fe2abae 211 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 99 177 3.7E-7 T 18-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 SHALO_1416 134c8b71cef4b771813eaa9d5fe2abae 211 Gene3D G3DSA:3.40.50.1000 7 190 1.8E-46 T 18-10-2018 IPR023214 HAD superfamily SHALO_1416 134c8b71cef4b771813eaa9d5fe2abae 211 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 67 181 7.8E-9 T 18-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 SHALO_1416 134c8b71cef4b771813eaa9d5fe2abae 211 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 182 2.6E-36 T 18-10-2018 SHALO_1416 134c8b71cef4b771813eaa9d5fe2abae 211 Gene3D G3DSA:1.10.150.240 19 83 1.8E-46 T 18-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 SHALO_1416 134c8b71cef4b771813eaa9d5fe2abae 211 SUPERFAMILY SSF56784 6 208 6.7E-46 T 18-10-2018 IPR036412 HAD-like superfamily SHALO_2235 29724fa9ef4900630cdc70f16a24e76a 287 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 287 1.7E-152 T 18-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 SHALO_2235 29724fa9ef4900630cdc70f16a24e76a 287 SUPERFAMILY SSF53448 1 286 1.55E-94 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_2235 29724fa9ef4900630cdc70f16a24e76a 287 Pfam PF00483 Nucleotidyl transferase 2 237 2.4E-69 T 18-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 SHALO_2235 29724fa9ef4900630cdc70f16a24e76a 287 Gene3D G3DSA:3.90.550.10 1 287 3.0E-85 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_2755 211a47dac03a35cedfb07a2126456afd 565 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 7 558 1.4E-219 T 18-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 SHALO_2755 211a47dac03a35cedfb07a2126456afd 565 Pfam PF03814 Potassium-transporting ATPase A subunit 11 557 1.4E-231 T 18-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 SHALO_2755 211a47dac03a35cedfb07a2126456afd 565 PIRSF PIRSF001294 1 561 1.2E-232 T 18-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 SHALO_2755 211a47dac03a35cedfb07a2126456afd 565 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 1 559 33.818 T 18-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 SHALO_2798 5fe38bff6e33dce6a45a48346ead8732 899 Pfam PF01568 Molydopterin dinucleotide binding domain 745 849 1.1E-19 T 18-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 SHALO_2798 5fe38bff6e33dce6a45a48346ead8732 899 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 10 41 1.2E-4 T 18-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal SHALO_2798 5fe38bff6e33dce6a45a48346ead8732 899 Gene3D G3DSA:3.40.228.10 197 312 3.0E-65 T 18-10-2018 SHALO_2798 5fe38bff6e33dce6a45a48346ead8732 899 Gene3D G3DSA:3.40.228.10 377 466 4.3E-42 T 18-10-2018 SHALO_2798 5fe38bff6e33dce6a45a48346ead8732 899 SMART SM00926 54 108 2.0E-13 T 18-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_2798 5fe38bff6e33dce6a45a48346ead8732 899 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 55 108 8.8E-14 T 18-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_2798 5fe38bff6e33dce6a45a48346ead8732 899 Gene3D G3DSA:2.40.40.20 719 869 1.6E-39 T 18-10-2018 SHALO_2798 5fe38bff6e33dce6a45a48346ead8732 899 SUPERFAMILY SSF53706 53 706 3.4E-130 T 18-10-2018 SHALO_2798 5fe38bff6e33dce6a45a48346ead8732 899 Pfam PF00384 Molybdopterin oxidoreductase 111 604 5.1E-44 T 18-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_2798 5fe38bff6e33dce6a45a48346ead8732 899 Gene3D G3DSA:3.40.50.740 467 653 4.3E-42 T 18-10-2018 SHALO_2798 5fe38bff6e33dce6a45a48346ead8732 899 Gene3D G3DSA:3.40.50.740 113 196 3.0E-65 T 18-10-2018 SHALO_2798 5fe38bff6e33dce6a45a48346ead8732 899 SUPERFAMILY SSF50692 685 869 1.35E-35 T 18-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily SHALO_2798 5fe38bff6e33dce6a45a48346ead8732 899 Gene3D G3DSA:2.20.25.90 47 112 2.8E-20 T 18-10-2018 SHALO_1202 db6abfdeb154535c40a0e9ade160919f 125 SUPERFAMILY SSF54862 1 88 9.08E-14 T 18-10-2018 SHALO_1202 db6abfdeb154535c40a0e9ade160919f 125 Pfam PF13187 4Fe-4S dicluster domain 9 64 2.3E-7 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_1202 db6abfdeb154535c40a0e9ade160919f 125 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_1202 db6abfdeb154535c40a0e9ade160919f 125 Gene3D G3DSA:3.30.70.20 2 86 3.3E-19 T 18-10-2018 SHALO_1261 a069941b97825315bdd591fe1e59bb0b 224 Gene3D G3DSA:3.40.50.2300 2 134 6.6E-31 T 18-10-2018 SHALO_1261 a069941b97825315bdd591fe1e59bb0b 224 SMART SM00448 9 120 1.4E-25 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_1261 a069941b97825315bdd591fe1e59bb0b 224 SUPERFAMILY SSF52172 8 187 1.28E-33 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_1261 a069941b97825315bdd591fe1e59bb0b 224 Gene3D G3DSA:1.10.10.10 138 224 7.2E-18 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_1261 a069941b97825315bdd591fe1e59bb0b 224 Pfam PF00072 Response regulator receiver domain 11 120 6.0E-23 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_1261 a069941b97825315bdd591fe1e59bb0b 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 223 3.9E-13 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_1261 a069941b97825315bdd591fe1e59bb0b 224 SMART SM00862 153 223 3.7E-13 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_2086 38d4b071f9318befc63787bce8baef01 420 Pfam PF07690 Major Facilitator Superfamily 15 380 1.5E-13 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SHALO_2086 38d4b071f9318befc63787bce8baef01 420 SUPERFAMILY SSF103473 9 415 3.79E-26 T 18-10-2018 IPR036259 MFS transporter superfamily SHALO_2086 38d4b071f9318befc63787bce8baef01 420 Gene3D G3DSA:1.20.1250.20 7 415 1.2E-22 T 18-10-2018 SHALO_1175 a847edd334dff003a5d2ad413ea934af 179 Gene3D G3DSA:2.40.128.110 29 179 3.2E-25 T 18-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily SHALO_1175 a847edd334dff003a5d2ad413ea934af 179 SMART SM00867 23 177 0.0015 T 18-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SHALO_1175 a847edd334dff003a5d2ad413ea934af 179 Pfam PF04264 YceI-like domain 52 174 1.3E-14 T 18-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SHALO_1175 a847edd334dff003a5d2ad413ea934af 179 SUPERFAMILY SSF101874 27 178 8.89E-22 T 18-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily SHALO_2736 a9fb0a18a8b0b965c24828b6126969b3 119 SUPERFAMILY SSF52172 2 118 5.27E-36 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_2736 a9fb0a18a8b0b965c24828b6126969b3 119 Pfam PF00072 Response regulator receiver domain 4 114 4.6E-29 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_2736 a9fb0a18a8b0b965c24828b6126969b3 119 SMART SM00448 1 114 3.2E-31 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_2736 a9fb0a18a8b0b965c24828b6126969b3 119 Gene3D G3DSA:3.40.50.12740 1 119 1.2E-37 T 18-10-2018 SHALO_2600 cbc8f83fceebf9b5bf91785bcf5e66aa 278 Gene3D G3DSA:3.40.50.150 40 174 6.8E-18 T 18-10-2018 SHALO_2600 cbc8f83fceebf9b5bf91785bcf5e66aa 278 Pfam PF13649 Methyltransferase domain 62 132 9.6E-10 T 18-10-2018 SHALO_2600 cbc8f83fceebf9b5bf91785bcf5e66aa 278 SUPERFAMILY SSF53335 19 143 8.59E-21 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_0245 274c888b2ee5c661b3d3f54e05682b40 244 Pfam PF00149 Calcineurin-like phosphoesterase 12 200 1.7E-4 T 18-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 SHALO_0245 274c888b2ee5c661b3d3f54e05682b40 244 Gene3D G3DSA:3.60.21.10 11 240 2.4E-9 T 18-10-2018 IPR029052 Metallo-dependent phosphatase-like SHALO_0245 274c888b2ee5c661b3d3f54e05682b40 244 SUPERFAMILY SSF56300 12 223 5.7E-18 T 18-10-2018 SHALO_1060 4d5554dee9451e9ff83b098b16b2b740 152 Gene3D G3DSA:1.20.120.50 1 131 7.0E-35 T 18-10-2018 IPR035938 Hemerythrin-like superfamily SHALO_1060 4d5554dee9451e9ff83b098b16b2b740 152 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 5 126 6.1E-35 T 18-10-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 SHALO_1060 4d5554dee9451e9ff83b098b16b2b740 152 Pfam PF01814 Hemerythrin HHE cation binding domain 13 123 6.4E-10 T 18-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 SHALO_1060 4d5554dee9451e9ff83b098b16b2b740 152 SUPERFAMILY SSF47188 1 126 2.22E-30 T 18-10-2018 IPR035938 Hemerythrin-like superfamily SHALO_1521 f88d21f4763178d8ce20eb44b38ef542 221 TIGRFAM TIGR02467 CbiE: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 12 210 2.4E-56 T 18-10-2018 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase GO:0008276|GO:0009236 SHALO_1521 f88d21f4763178d8ce20eb44b38ef542 221 SUPERFAMILY SSF53790 9 211 2.49E-37 T 18-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 SHALO_1521 f88d21f4763178d8ce20eb44b38ef542 221 Gene3D G3DSA:3.40.1010.10 7 111 1.7E-18 T 18-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 SHALO_1521 f88d21f4763178d8ce20eb44b38ef542 221 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 9 192 3.5E-21 T 18-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 SHALO_1467 10aaf746c211dfb864a67b49f480ae1d 441 Pfam PF07724 AAA domain (Cdc48 subfamily) 200 326 1.5E-37 T 18-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 SHALO_1467 10aaf746c211dfb864a67b49f480ae1d 441 Pfam PF07724 AAA domain (Cdc48 subfamily) 51 114 1.4E-6 T 18-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 SHALO_1467 10aaf746c211dfb864a67b49f480ae1d 441 SMART SM01086 333 429 2.1E-21 T 18-10-2018 IPR019489 Clp ATPase, C-terminal SHALO_1467 10aaf746c211dfb864a67b49f480ae1d 441 SMART SM00382 48 330 1.0E-10 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_1467 10aaf746c211dfb864a67b49f480ae1d 441 Gene3D G3DSA:1.10.8.60 333 438 5.8E-36 T 18-10-2018 SHALO_1467 10aaf746c211dfb864a67b49f480ae1d 441 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 333 403 5.6E-7 T 18-10-2018 IPR019489 Clp ATPase, C-terminal SHALO_1467 10aaf746c211dfb864a67b49f480ae1d 441 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 3 441 4.3E-192 T 18-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 SHALO_1467 10aaf746c211dfb864a67b49f480ae1d 441 SUPERFAMILY SSF52540 2 438 2.86E-73 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0874 d48a889d28873b3833e616c7c831bc39 599 Gene3D G3DSA:3.40.710.10 234 597 1.0E-85 T 18-10-2018 SHALO_0874 d48a889d28873b3833e616c7c831bc39 599 SUPERFAMILY SSF56601 235 592 6.61E-85 T 18-10-2018 IPR012338 Beta-lactamase/transpeptidase-like SHALO_0874 d48a889d28873b3833e616c7c831bc39 599 SUPERFAMILY SSF56519 39 230 1.07E-30 T 18-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 SHALO_0874 d48a889d28873b3833e616c7c831bc39 599 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 2 592 1.3E-172 T 18-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 SHALO_0874 d48a889d28873b3833e616c7c831bc39 599 Pfam PF03717 Penicillin-binding Protein dimerisation domain 47 221 4.7E-26 T 18-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 SHALO_0874 d48a889d28873b3833e616c7c831bc39 599 Gene3D G3DSA:3.90.1310.10 46 227 9.6E-32 T 18-10-2018 SHALO_0874 d48a889d28873b3833e616c7c831bc39 599 Gene3D G3DSA:3.30.1390.30 67 148 9.6E-32 T 18-10-2018 SHALO_0874 d48a889d28873b3833e616c7c831bc39 599 Pfam PF00905 Penicillin binding protein transpeptidase domain 252 588 4.6E-62 T 18-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 SHALO_2367 3cd0ee08f4ef77d898d23bef8fc479ac 209 Pfam PF07277 SapC 31 158 5.3E-6 T 18-10-2018 IPR010836 SapC SHALO_2367 3cd0ee08f4ef77d898d23bef8fc479ac 209 Pfam PF03692 Putative zinc- or iron-chelating domain 20 111 2.7E-7 T 18-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein SHALO_0824 5ba2cd0b5cd614415ac1f283ea7d9ec5 96 Pfam PF01909 Nucleotidyltransferase domain 10 95 2.2E-11 T 18-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 SHALO_0824 5ba2cd0b5cd614415ac1f283ea7d9ec5 96 SUPERFAMILY SSF81301 5 96 1.78E-18 T 18-10-2018 SHALO_0824 5ba2cd0b5cd614415ac1f283ea7d9ec5 96 Gene3D G3DSA:3.30.460.10 4 95 4.4E-21 T 18-10-2018 SHALO_2122 d7207c903d7fba75e18b14c4792ee99f 68 Gene3D G3DSA:3.40.30.10 1 67 3.6E-10 T 18-10-2018 SHALO_2122 d7207c903d7fba75e18b14c4792ee99f 68 SUPERFAMILY SSF52833 2 64 3.58E-6 T 18-10-2018 IPR036249 Thioredoxin-like superfamily SHALO_2122 d7207c903d7fba75e18b14c4792ee99f 68 Pfam PF10262 Rdx family 1 63 2.0E-10 T 18-10-2018 IPR011893 Selenoprotein, Rdx-type SHALO_1781 6ab8f5f616c4be8cc22f93d607fe7d43 62 Pfam PF08410 Domain of unknown function (DUF1737) 2 50 1.2E-21 T 18-10-2018 IPR013619 Domain of unknown function DUF1737 SHALO_0674 220001a354547128702010061999a8bd 210 SUPERFAMILY SSF55681 2 152 1.14E-28 T 18-10-2018 SHALO_0674 220001a354547128702010061999a8bd 210 Gene3D G3DSA:3.30.930.10 1 177 4.1E-27 T 18-10-2018 SHALO_0674 220001a354547128702010061999a8bd 210 Pfam PF03099 Biotin/lipoate A/B protein ligase family 6 116 1.6E-12 T 18-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 SHALO_0674 220001a354547128702010061999a8bd 210 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 2 187 3.0E-26 T 18-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 SHALO_2848 da6263bfa7cc58ae9ddde1ec2998f86e 339 SUPERFAMILY SSF53850 25 332 8.93E-80 T 18-10-2018 SHALO_2848 da6263bfa7cc58ae9ddde1ec2998f86e 339 PIRSF PIRSF002825 12 339 1.3E-83 T 18-10-2018 IPR026045 Ferric binding protein SHALO_2848 da6263bfa7cc58ae9ddde1ec2998f86e 339 Gene3D G3DSA:3.40.190.10 125 336 5.2E-125 T 18-10-2018 SHALO_2848 da6263bfa7cc58ae9ddde1ec2998f86e 339 Gene3D G3DSA:3.40.190.10 27 302 5.2E-125 T 18-10-2018 SHALO_2848 da6263bfa7cc58ae9ddde1ec2998f86e 339 Pfam PF13343 Bacterial extracellular solute-binding protein 72 301 5.5E-27 T 18-10-2018 SHALO_3005 a09c1e5c56f466767cced0a707774dcc 111 Pfam PF03840 Preprotein translocase SecG subunit 4 71 2.5E-15 T 18-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 SHALO_3005 a09c1e5c56f466767cced0a707774dcc 111 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 71 1.2E-17 T 18-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 SHALO_0191 ad00bc6cf2e6fc78cc2ecc0999eff10f 184 Gene3D G3DSA:1.20.120.1200 4 163 1.4E-33 T 18-10-2018 SHALO_0191 ad00bc6cf2e6fc78cc2ecc0999eff10f 184 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 20 161 2.6E-29 T 18-10-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0665 b80e91e3094fbb927eeb598f9d79f4eb 149 Pfam PF00583 Acetyltransferase (GNAT) family 35 136 8.5E-23 T 18-10-2018 IPR000182 GNAT domain SHALO_0665 b80e91e3094fbb927eeb598f9d79f4eb 149 Gene3D G3DSA:3.40.630.30 1 144 1.0E-33 T 18-10-2018 SHALO_0665 b80e91e3094fbb927eeb598f9d79f4eb 149 SUPERFAMILY SSF55729 1 137 3.99E-32 T 18-10-2018 IPR016181 Acyl-CoA N-acyltransferase SHALO_2907 07cd52a6ca8da486b5e9cd2ddaff7e74 329 Pfam PF02719 Polysaccharide biosynthesis protein 7 280 1.4E-103 T 18-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain SHALO_2907 07cd52a6ca8da486b5e9cd2ddaff7e74 329 Gene3D G3DSA:3.40.50.720 5 310 1.0E-133 T 18-10-2018 SHALO_2907 07cd52a6ca8da486b5e9cd2ddaff7e74 329 Gene3D G3DSA:3.90.25.30 167 314 1.0E-133 T 18-10-2018 SHALO_2907 07cd52a6ca8da486b5e9cd2ddaff7e74 329 SUPERFAMILY SSF51735 4 269 1.76E-49 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_2907 07cd52a6ca8da486b5e9cd2ddaff7e74 329 TIGRFAM TIGR03589 PseB: UDP-N-acetylglucosamine 4,6-dehydratase (inverting) 2 327 2.9E-167 T 18-10-2018 IPR020025 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) KEGG: 00520+4.2.1.115|MetaCyc: PWY-6143|MetaCyc: PWY-7330|MetaCyc: PWY-7331|MetaCyc: PWY-7332|MetaCyc: PWY-7719 SHALO_0036 33600e88488278f46acd7e1e14cd7ba0 310 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 13 309 1.1E-21 T 18-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 SHALO_0036 33600e88488278f46acd7e1e14cd7ba0 310 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 106 286 6.3E-48 T 18-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 SHALO_0036 33600e88488278f46acd7e1e14cd7ba0 310 Gene3D G3DSA:3.40.50.720 96 285 3.5E-101 T 18-10-2018 SHALO_0036 33600e88488278f46acd7e1e14cd7ba0 310 SUPERFAMILY SSF52283 1 131 5.29E-27 T 18-10-2018 SHALO_0036 33600e88488278f46acd7e1e14cd7ba0 310 Gene3D G3DSA:3.40.50.720 14 309 3.5E-101 T 18-10-2018 SHALO_0036 33600e88488278f46acd7e1e14cd7ba0 310 SUPERFAMILY SSF51735 98 287 1.6E-44 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_2589 0a7f807dd6801b74baf440cd9d715474 86 SUPERFAMILY SSF143120 2 69 1.7E-9 T 18-10-2018 IPR036165 YefM-like superfamily SHALO_2589 0a7f807dd6801b74baf440cd9d715474 86 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 25 53 3.6E-5 T 18-10-2018 SHALO_0140 5bccc1be007cd27dc0b9c8f60d0f544a 98 Gene3D G3DSA:1.10.760.10 19 96 3.4E-19 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_0140 5bccc1be007cd27dc0b9c8f60d0f544a 98 Pfam PF00034 Cytochrome c 18 98 1.0E-8 T 18-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_0140 5bccc1be007cd27dc0b9c8f60d0f544a 98 SUPERFAMILY SSF46626 10 97 2.54E-15 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_2294 b91e19c7186cf086ee7d0276f002b896 561 SUPERFAMILY SSF47384 337 411 1.94E-5 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SHALO_2294 b91e19c7186cf086ee7d0276f002b896 561 PRINTS PR00344 Bacterial sensor protein C-terminal signature 549 561 2.3E-9 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_2294 b91e19c7186cf086ee7d0276f002b896 561 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 508 2.3E-9 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_2294 b91e19c7186cf086ee7d0276f002b896 561 PRINTS PR00344 Bacterial sensor protein C-terminal signature 525 543 2.3E-9 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_2294 b91e19c7186cf086ee7d0276f002b896 561 PRINTS PR00344 Bacterial sensor protein C-terminal signature 512 522 2.3E-9 T 18-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_2294 b91e19c7186cf086ee7d0276f002b896 561 Gene3D G3DSA:3.30.565.10 413 561 2.4E-30 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_2294 b91e19c7186cf086ee7d0276f002b896 561 Gene3D G3DSA:1.10.287.130 320 408 2.1E-9 T 18-10-2018 SHALO_2294 b91e19c7186cf086ee7d0276f002b896 561 SUPERFAMILY SSF55874 411 561 9.17E-30 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_2294 b91e19c7186cf086ee7d0276f002b896 561 SMART SM00387 453 561 1.2E-9 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_2294 b91e19c7186cf086ee7d0276f002b896 561 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 455 558 4.2E-13 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_2352 04bfe6bff88c03f60bbd1500e62e5e9f 107 SUPERFAMILY SSF51182 22 104 1.6E-9 T 18-10-2018 IPR011051 RmlC-like cupin domain superfamily SHALO_1440 e4233029afcd5946260de460dc3973b9 297 SMART SM01130 4 293 1.4E-129 T 18-10-2018 IPR002220 DapA-like GO:0016829 SHALO_1440 e4233029afcd5946260de460dc3973b9 297 Pfam PF00701 Dihydrodipicolinate synthetase family 5 291 3.3E-88 T 18-10-2018 IPR002220 DapA-like GO:0016829 SHALO_1440 e4233029afcd5946260de460dc3973b9 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 37 58 1.4E-34 T 18-10-2018 IPR002220 DapA-like GO:0016829 SHALO_1440 e4233029afcd5946260de460dc3973b9 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 74 92 1.4E-34 T 18-10-2018 IPR002220 DapA-like GO:0016829 SHALO_1440 e4233029afcd5946260de460dc3973b9 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 106 122 1.4E-34 T 18-10-2018 IPR002220 DapA-like GO:0016829 SHALO_1440 e4233029afcd5946260de460dc3973b9 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 131 148 1.4E-34 T 18-10-2018 IPR002220 DapA-like GO:0016829 SHALO_1440 e4233029afcd5946260de460dc3973b9 297 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 8 292 6.7E-106 T 18-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 SHALO_1440 e4233029afcd5946260de460dc3973b9 297 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 136 167 - T 18-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 SHALO_1440 e4233029afcd5946260de460dc3973b9 297 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 4 291 62.531 T 18-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 SHALO_1440 e4233029afcd5946260de460dc3973b9 297 SUPERFAMILY SSF51569 5 292 4.81E-93 T 18-10-2018 SHALO_1440 e4233029afcd5946260de460dc3973b9 297 Gene3D G3DSA:3.20.20.70 1 297 1.2E-117 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_1440 e4233029afcd5946260de460dc3973b9 297 PIRSF PIRSF001365 1 295 9.3E-84 T 18-10-2018 IPR002220 DapA-like GO:0016829 SHALO_2469 d59a6194f0d39ce24fab0a88d6a9ff25 164 Gene3D G3DSA:2.40.50.180 32 141 1.9E-40 T 18-10-2018 SHALO_2469 d59a6194f0d39ce24fab0a88d6a9ff25 164 SMART SM00260 9 146 3.8E-29 T 18-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 SHALO_2469 d59a6194f0d39ce24fab0a88d6a9ff25 164 SUPERFAMILY SSF50341 12 151 2.35E-36 T 18-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 SHALO_2469 d59a6194f0d39ce24fab0a88d6a9ff25 164 Gene3D G3DSA:2.30.30.40 15 140 1.9E-40 T 18-10-2018 SHALO_2469 d59a6194f0d39ce24fab0a88d6a9ff25 164 Pfam PF01584 CheW-like domain 14 149 3.2E-33 T 18-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 SHALO_2920 906a889eb9c6d841f333229ad3f2b3a9 314 Pfam PF08241 Methyltransferase domain 102 196 9.0E-17 T 18-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 SHALO_2920 906a889eb9c6d841f333229ad3f2b3a9 314 SUPERFAMILY SSF158997 3 66 4.97E-9 T 18-10-2018 SHALO_2920 906a889eb9c6d841f333229ad3f2b3a9 314 SUPERFAMILY SSF53335 77 300 2.79E-29 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_0742 69a4ac5d132d5768300d1ad0c4782653 470 Gene3D G3DSA:3.60.120.10 1 470 6.9E-143 T 18-10-2018 IPR005801 ADC synthase GO:0009058 SHALO_0742 69a4ac5d132d5768300d1ad0c4782653 470 Pfam PF04715 Anthranilate synthase component I, N terminal region 10 161 4.2E-20 T 18-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 SHALO_0742 69a4ac5d132d5768300d1ad0c4782653 470 SUPERFAMILY SSF56322 4 466 3.01E-131 T 18-10-2018 IPR005801 ADC synthase GO:0009058 SHALO_0742 69a4ac5d132d5768300d1ad0c4782653 470 Pfam PF00425 chorismate binding enzyme 203 457 9.0E-92 T 18-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal SHALO_0742 69a4ac5d132d5768300d1ad0c4782653 470 PRINTS PR00095 Anthranilate synthase component I signature 399 413 1.3E-22 T 18-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 SHALO_0742 69a4ac5d132d5768300d1ad0c4782653 470 PRINTS PR00095 Anthranilate synthase component I signature 319 332 1.3E-22 T 18-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 SHALO_0742 69a4ac5d132d5768300d1ad0c4782653 470 PRINTS PR00095 Anthranilate synthase component I signature 414 428 1.3E-22 T 18-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 SHALO_0742 69a4ac5d132d5768300d1ad0c4782653 470 PRINTS PR00095 Anthranilate synthase component I signature 305 318 1.3E-22 T 18-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 SHALO_1894 47880f387d04bcd02b602de2bc85128e 103 Gene3D G3DSA:2.60.120.10 1 102 1.8E-36 T 18-10-2018 IPR014710 RmlC-like jelly roll fold SHALO_1894 47880f387d04bcd02b602de2bc85128e 103 SUPERFAMILY SSF51182 10 101 1.69E-28 T 18-10-2018 IPR011051 RmlC-like cupin domain superfamily SHALO_1894 47880f387d04bcd02b602de2bc85128e 103 Pfam PF06865 Protein of unknown function (DUF1255) 10 101 7.2E-32 T 18-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 SHALO_1894 47880f387d04bcd02b602de2bc85128e 103 Hamap MF_01537 Pyrimidine/purine nucleoside phosphorylase [ppnP]. 9 102 23.136 T 18-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 SHALO_2951 17104d85a42dc5f5e33b3ad8f923059c 444 Pfam PF05833 Fibronectin-binding protein A N-terminus (FbpA) 174 320 4.3E-10 T 18-10-2018 SHALO_2951 17104d85a42dc5f5e33b3ad8f923059c 444 Pfam PF05833 Fibronectin-binding protein A N-terminus (FbpA) 18 168 5.6E-10 T 18-10-2018 SHALO_2951 17104d85a42dc5f5e33b3ad8f923059c 444 Pfam PF05670 Domain of unknown function (DUF814) 344 424 1.5E-18 T 18-10-2018 IPR008532 Domain of unknown function DUF814 SHALO_2951 17104d85a42dc5f5e33b3ad8f923059c 444 Gene3D G3DSA:2.30.310.10 6 156 6.0E-14 T 18-10-2018 SHALO_2206 fb139bc154e6670401105a997c44dde4 110 Pfam PF00072 Response regulator receiver domain 1 105 2.8E-25 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_2206 fb139bc154e6670401105a997c44dde4 110 SMART SM00448 1 105 7.1E-24 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_2206 fb139bc154e6670401105a997c44dde4 110 Gene3D G3DSA:3.40.50.2300 1 110 1.6E-31 T 18-10-2018 SHALO_2206 fb139bc154e6670401105a997c44dde4 110 SUPERFAMILY SSF52172 1 109 4.98E-30 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_0529 cf39b9e26731c1c6dd1aae29111d65ec 457 SUPERFAMILY SSF102114 4 443 3.4E-132 T 18-10-2018 SHALO_0529 cf39b9e26731c1c6dd1aae29111d65ec 457 Gene3D G3DSA:1.10.10.920 361 457 6.0E-26 T 18-10-2018 SHALO_0529 cf39b9e26731c1c6dd1aae29111d65ec 457 Pfam PF04055 Radical SAM superfamily 53 225 3.3E-20 T 18-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 SHALO_0529 cf39b9e26731c1c6dd1aae29111d65ec 457 Pfam PF06969 HemN C-terminal domain 361 416 6.8E-7 T 18-10-2018 IPR010723 HemN, C-terminal SHALO_0529 cf39b9e26731c1c6dd1aae29111d65ec 457 PIRSF PIRSF000167 1 453 1.0E-164 T 18-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 SHALO_0529 cf39b9e26731c1c6dd1aae29111d65ec 457 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 2 457 4.8E-193 T 18-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 SHALO_0529 cf39b9e26731c1c6dd1aae29111d65ec 457 SMART SM00729 47 269 2.2E-57 T 18-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 SHALO_0529 cf39b9e26731c1c6dd1aae29111d65ec 457 Gene3D G3DSA:3.80.30.20 1 360 6.0E-116 T 18-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe SHALO_2217 eefbe8842dd905d01c3ed109acb171c3 204 SUPERFAMILY SSF51161 79 201 7.76E-35 T 18-10-2018 IPR011004 Trimeric LpxA-like superfamily SHALO_2217 eefbe8842dd905d01c3ed109acb171c3 204 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 84 119 1.2E-7 T 18-10-2018 IPR001451 Hexapeptide repeat SHALO_2217 eefbe8842dd905d01c3ed109acb171c3 204 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 154 182 - T 18-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 SHALO_2217 eefbe8842dd905d01c3ed109acb171c3 204 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 145 180 2.1E-7 T 18-10-2018 IPR001451 Hexapeptide repeat SHALO_2217 eefbe8842dd905d01c3ed109acb171c3 204 Gene3D G3DSA:2.160.10.10 26 204 2.3E-41 T 18-10-2018 SHALO_1843 7b74e36c93948b13fbd583393ea54966 118 Gene3D G3DSA:3.40.50.720 1 115 2.4E-26 T 18-10-2018 SHALO_1843 7b74e36c93948b13fbd583393ea54966 118 Pfam PF02254 TrkA-N domain 4 113 2.6E-20 T 18-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SHALO_1843 7b74e36c93948b13fbd583393ea54966 118 SUPERFAMILY SSF51735 3 113 5.15E-25 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_2105 fe8a5cd4d35ef5245e3628887132a177 397 SUPERFAMILY SSF103473 19 394 2.62E-50 T 18-10-2018 IPR036259 MFS transporter superfamily SHALO_2105 fe8a5cd4d35ef5245e3628887132a177 397 Pfam PF07690 Major Facilitator Superfamily 26 271 2.4E-25 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SHALO_2105 fe8a5cd4d35ef5245e3628887132a177 397 Gene3D G3DSA:1.20.1250.20 19 395 3.9E-43 T 18-10-2018 SHALO_2660 c9636f50429782b5433fdf42c5189754 670 Gene3D G3DSA:2.40.170.20 149 670 2.8E-70 T 18-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily SHALO_2660 c9636f50429782b5433fdf42c5189754 670 Gene3D G3DSA:2.170.130.10 36 148 1.6E-26 T 18-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily SHALO_2660 c9636f50429782b5433fdf42c5189754 670 Pfam PF00593 TonB dependent receptor 210 669 1.3E-48 T 18-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel SHALO_2660 c9636f50429782b5433fdf42c5189754 670 Pfam PF07715 TonB-dependent Receptor Plug Domain 40 139 8.1E-22 T 18-10-2018 IPR012910 TonB-dependent receptor, plug domain SHALO_2660 c9636f50429782b5433fdf42c5189754 670 SUPERFAMILY SSF56935 26 670 8.06E-108 T 18-10-2018 SHALO_2660 c9636f50429782b5433fdf42c5189754 670 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 653 670 - T 18-10-2018 IPR010917 TonB-dependent receptor, conserved site SHALO_2769 f2331245ae8bc6a8901ba67695be427f 68 PIRSF PIRSF037225 1 67 2.7E-17 T 18-10-2018 IPR017143 Uncharacterised conserved protein UCP037225 SHALO_2769 f2331245ae8bc6a8901ba67695be427f 68 Pfam PF14255 Cysteine-rich CPXCG 10 60 2.0E-17 T 18-10-2018 IPR025990 Cysteine-rich CPXCG protein SHALO_2091 e6f14b72172617ec497183c951d27446 449 TIGRFAM TIGR03125 citrate_citG: triphosphoribosyl-dephospho-CoA synthase CitG 177 444 3.1E-88 T 18-10-2018 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 SHALO_2091 e6f14b72172617ec497183c951d27446 449 Gene3D G3DSA:1.10.4200.10 337 446 1.7E-5 T 18-10-2018 SHALO_2091 e6f14b72172617ec497183c951d27446 449 Pfam PF01874 ATP:dephospho-CoA triphosphoribosyl transferase 181 442 4.6E-68 T 18-10-2018 IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 SHALO_2091 e6f14b72172617ec497183c951d27446 449 Pfam PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase 7 170 2.0E-46 T 18-10-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 SHALO_2091 e6f14b72172617ec497183c951d27446 449 TIGRFAM TIGR03124 citrate_citX: holo-ACP synthase CitX 7 170 1.0E-45 T 18-10-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 SHALO_2091 e6f14b72172617ec497183c951d27446 449 Hamap MF_00397 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase [citG]. 157 449 120.013 T 18-10-2018 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 SHALO_2481 accfbf9fab31b78290ba4617f7a16565 372 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 295 367 2.9E-14 T 18-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_2481 accfbf9fab31b78290ba4617f7a16565 372 Gene3D G3DSA:1.10.760.10 87 235 5.9E-45 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_2481 accfbf9fab31b78290ba4617f7a16565 372 SUPERFAMILY SSF46626 5 204 2.84E-13 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_2481 accfbf9fab31b78290ba4617f7a16565 372 PRINTS PR00607 Class IE cytochrome C signature 357 368 5.0E-13 T 18-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 SHALO_2481 accfbf9fab31b78290ba4617f7a16565 372 PRINTS PR00607 Class IE cytochrome C signature 342 354 5.0E-13 T 18-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 SHALO_2481 accfbf9fab31b78290ba4617f7a16565 372 PRINTS PR00607 Class IE cytochrome C signature 303 314 5.0E-13 T 18-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 SHALO_2481 accfbf9fab31b78290ba4617f7a16565 372 PRINTS PR00607 Class IE cytochrome C signature 314 324 5.0E-13 T 18-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 SHALO_2481 accfbf9fab31b78290ba4617f7a16565 372 Gene3D G3DSA:1.10.760.10 286 372 2.2E-26 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_2481 accfbf9fab31b78290ba4617f7a16565 372 SUPERFAMILY SSF46626 295 370 1.06E-13 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_2546 dc860ba716da3529a160facbeaa32ab9 263 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 15 262 4.4E-83 T 18-10-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 SHALO_2546 dc860ba716da3529a160facbeaa32ab9 263 SUPERFAMILY SSF161098 66 252 9.29E-34 T 18-10-2018 IPR035906 MetI-like superfamily SHALO_2546 dc860ba716da3529a160facbeaa32ab9 263 Gene3D G3DSA:1.10.3720.10 68 261 1.6E-33 T 18-10-2018 IPR035906 MetI-like superfamily SHALO_2546 dc860ba716da3529a160facbeaa32ab9 263 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 251 3.7E-16 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 SHALO_1850 80066ccff60fa5c5173a7661a6d5c2c7 444 Pfam PF13353 4Fe-4S single cluster domain 99 161 3.3E-6 T 18-10-2018 SHALO_1850 80066ccff60fa5c5173a7661a6d5c2c7 444 Pfam PF04055 Radical SAM superfamily 96 256 1.4E-17 T 18-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 SHALO_1850 80066ccff60fa5c5173a7661a6d5c2c7 444 Gene3D G3DSA:3.20.20.70 91 380 3.5E-40 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_1850 80066ccff60fa5c5173a7661a6d5c2c7 444 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 98 109 - T 18-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 SHALO_1850 80066ccff60fa5c5173a7661a6d5c2c7 444 SMART SM00729 92 299 0.0098 T 18-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 SHALO_1850 80066ccff60fa5c5173a7661a6d5c2c7 444 SUPERFAMILY SSF102114 81 303 1.31E-45 T 18-10-2018 SHALO_0219 2a37e7f566652c98f6429f9feeb3feb8 445 Gene3D G3DSA:3.40.50.2020 262 426 3.1E-152 T 18-10-2018 SHALO_0219 2a37e7f566652c98f6429f9feeb3feb8 445 Gene3D G3DSA:3.60.20.10 2 443 3.1E-152 T 18-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal SHALO_0219 2a37e7f566652c98f6429f9feeb3feb8 445 PIRSF PIRSF000485 1 445 5.9E-167 T 18-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 SHALO_0219 2a37e7f566652c98f6429f9feeb3feb8 445 Pfam PF00156 Phosphoribosyl transferase domain 263 373 5.6E-8 T 18-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 SHALO_0219 2a37e7f566652c98f6429f9feeb3feb8 445 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 442 43.933 T 18-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 SHALO_0219 2a37e7f566652c98f6429f9feeb3feb8 445 SUPERFAMILY SSF56235 2 222 1.89E-63 T 18-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal SHALO_0219 2a37e7f566652c98f6429f9feeb3feb8 445 Pfam PF13537 Glutamine amidotransferase domain 71 199 3.1E-21 T 18-10-2018 IPR017932 Glutamine amidotransferase type 2 domain SHALO_0219 2a37e7f566652c98f6429f9feeb3feb8 445 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 442 2.8E-158 T 18-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 SHALO_0219 2a37e7f566652c98f6429f9feeb3feb8 445 SUPERFAMILY SSF53271 238 443 2.98E-65 T 18-10-2018 IPR029057 Phosphoribosyltransferase-like SHALO_1380 82ba213a120c08ed6e4fa165eb6c5d54 409 SUPERFAMILY SSF51556 52 360 9.18E-61 T 18-10-2018 IPR032466 Metal-dependent hydrolase SHALO_1380 82ba213a120c08ed6e4fa165eb6c5d54 409 Pfam PF00449 Urease alpha-subunit, N-terminal domain 2 41 1.2E-4 T 18-10-2018 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 SHALO_1380 82ba213a120c08ed6e4fa165eb6c5d54 409 Pfam PF01979 Amidohydrolase family 48 406 2.9E-18 T 18-10-2018 IPR006680 Amidohydrolase-related GO:0016787 SHALO_1380 82ba213a120c08ed6e4fa165eb6c5d54 409 Gene3D G3DSA:3.20.20.140 1 409 6.1E-86 T 18-10-2018 SHALO_1380 82ba213a120c08ed6e4fa165eb6c5d54 409 SUPERFAMILY SSF51338 1 407 1.62E-25 T 18-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 SHALO_0853 cee9c51c8d821822c05da307d5dee23e 365 Pfam PF03060 Nitronate monooxygenase 5 361 5.9E-85 T 18-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 SHALO_0853 cee9c51c8d821822c05da307d5dee23e 365 Gene3D G3DSA:3.20.20.70 9 365 3.3E-67 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_0853 cee9c51c8d821822c05da307d5dee23e 365 SUPERFAMILY SSF51412 8 357 7.33E-51 T 18-10-2018 SHALO_1150 7adb4915a1081a873f91dcb3d947907d 219 ProSitePatterns PS00501 Signal peptidases I serine active site. 137 144 - T 18-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 SHALO_1150 7adb4915a1081a873f91dcb3d947907d 219 SUPERFAMILY SSF51306 94 214 2.62E-19 T 18-10-2018 IPR036286 LexA/Signal peptidase-like superfamily SHALO_1150 7adb4915a1081a873f91dcb3d947907d 219 Gene3D G3DSA:2.10.109.10 95 218 2.0E-11 T 18-10-2018 SHALO_1150 7adb4915a1081a873f91dcb3d947907d 219 Gene3D G3DSA:1.10.260.40 15 75 6.6E-11 T 18-10-2018 SHALO_1150 7adb4915a1081a873f91dcb3d947907d 219 Pfam PF00717 Peptidase S24-like 135 202 2.9E-11 T 18-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C SHALO_2359 787fa7b8fc7ad9d5065b96007478aa41 434 SUPERFAMILY SSF52540 17 170 4.54E-18 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_2359 787fa7b8fc7ad9d5065b96007478aa41 434 Pfam PF13173 AAA domain 34 168 7.4E-36 T 18-10-2018 SHALO_2359 787fa7b8fc7ad9d5065b96007478aa41 434 Pfam PF13635 Domain of unknown function (DUF4143) 224 365 1.5E-6 T 18-10-2018 IPR025420 Domain of unknown function DUF4143 SHALO_0309 bfee0f00103c4a7ea087828b782d2e71 321 Pfam PF03916 Polysulphide reductase, NrfD 8 320 2.7E-79 T 18-10-2018 IPR005614 NrfD family SHALO_0309 bfee0f00103c4a7ea087828b782d2e71 321 Gene3D G3DSA:1.20.1630.10 8 233 6.8E-16 T 18-10-2018 SHALO_0033 cd6e9b4ad3b8510926a211b0eac8fc2a 205 SUPERFAMILY SSF158442 14 191 1.27E-26 T 18-10-2018 IPR023380 DsbB-like superfamily SHALO_0033 cd6e9b4ad3b8510926a211b0eac8fc2a 205 Gene3D G3DSA:1.20.1550.10 1 156 5.7E-36 T 18-10-2018 IPR023380 DsbB-like superfamily SHALO_0033 cd6e9b4ad3b8510926a211b0eac8fc2a 205 Pfam PF02600 Disulfide bond formation protein DsbB 11 192 7.7E-39 T 18-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 SHALO_0194 405f1227a83d97f2a255146ed3d7caed 508 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 235 259 8.8E-40 T 18-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0194 405f1227a83d97f2a255146ed3d7caed 508 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 160 184 8.8E-40 T 18-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0194 405f1227a83d97f2a255146ed3d7caed 508 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 323 342 8.8E-40 T 18-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0194 405f1227a83d97f2a255146ed3d7caed 508 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 375 401 8.8E-40 T 18-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0194 405f1227a83d97f2a255146ed3d7caed 508 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 130 149 8.8E-40 T 18-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0194 405f1227a83d97f2a255146ed3d7caed 508 Pfam PF00361 Proton-conducting membrane transporter 126 416 7.3E-68 T 18-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0194 405f1227a83d97f2a255146ed3d7caed 508 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 5 482 2.2E-173 T 18-10-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0639 864f0ea42d6edf987cdceb7ed0671591 1048 Pfam PF05140 ResB-like family 346 418 4.3E-12 T 18-10-2018 IPR007816 ResB-like domain SHALO_0639 864f0ea42d6edf987cdceb7ed0671591 1048 Pfam PF01578 Cytochrome C assembly protein 803 1010 2.6E-40 T 18-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 SHALO_1290 63a600ed96fe6f3e7676bff2aa46e7fb 380 Gene3D G3DSA:1.10.287.950 55 380 1.9E-50 T 18-10-2018 SHALO_1290 63a600ed96fe6f3e7676bff2aa46e7fb 380 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 196 345 6.2E-33 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_1290 63a600ed96fe6f3e7676bff2aa46e7fb 380 SMART SM00283 114 379 1.1E-37 T 18-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SHALO_1290 63a600ed96fe6f3e7676bff2aa46e7fb 380 SUPERFAMILY SSF58104 75 380 1.03E-50 T 18-10-2018 SHALO_2880 b3d609fbf8a096e755430bf4ef5f0ec2 412 Pfam PF12704 MacB-like periplasmic core domain 19 243 2.9E-9 T 18-10-2018 IPR025857 MacB-like periplasmic core domain SHALO_2880 b3d609fbf8a096e755430bf4ef5f0ec2 412 Pfam PF02687 FtsX-like permease family 307 405 2.2E-7 T 18-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 SHALO_0422 a1e691e7afaab124fe4a598f13332736 210 SMART SM00857 4 149 5.1E-38 T 18-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 SHALO_0422 a1e691e7afaab124fe4a598f13332736 210 Gene3D G3DSA:3.40.50.1390 2 156 8.2E-31 T 18-10-2018 SHALO_0422 a1e691e7afaab124fe4a598f13332736 210 Pfam PF00239 Resolvase, N terminal domain 4 147 2.1E-35 T 18-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 SHALO_0422 a1e691e7afaab124fe4a598f13332736 210 ProSitePatterns PS00397 Site-specific recombinases active site. 7 15 - T 18-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 SHALO_0422 a1e691e7afaab124fe4a598f13332736 210 SUPERFAMILY SSF53041 4 148 1.57E-29 T 18-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 SHALO_0173 7e2a483fbc7c04572c9f490b6fc2a81c 268 Gene3D G3DSA:1.10.3470.10 38 267 1.7E-7 T 18-10-2018 IPR037294 ABC transporter, BtuC-like SHALO_0173 7e2a483fbc7c04572c9f490b6fc2a81c 268 Pfam PF00950 ABC 3 transport family 7 262 2.0E-73 T 18-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 SHALO_0173 7e2a483fbc7c04572c9f490b6fc2a81c 268 SUPERFAMILY SSF81345 3 260 1.44E-34 T 18-10-2018 IPR037294 ABC transporter, BtuC-like SHALO_0632 238f23deef2bfc75ecc8cde618a0cdd3 96 SUPERFAMILY SSF81301 1 96 2.62E-20 T 18-10-2018 SHALO_0632 238f23deef2bfc75ecc8cde618a0cdd3 96 Gene3D G3DSA:3.30.460.10 3 95 1.5E-21 T 18-10-2018 SHALO_0632 238f23deef2bfc75ecc8cde618a0cdd3 96 Pfam PF01909 Nucleotidyltransferase domain 13 95 5.7E-15 T 18-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 SHALO_0396 1e80f209640c4e907aac0340a73f960d 252 Gene3D G3DSA:3.30.70.1290 1 156 1.1E-33 T 18-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 SHALO_0396 1e80f209640c4e907aac0340a73f960d 252 Pfam PF01797 Transposase IS200 like 12 122 1.1E-16 T 18-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SHALO_0396 1e80f209640c4e907aac0340a73f960d 252 SMART SM01321 8 122 3.5E-37 T 18-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SHALO_0396 1e80f209640c4e907aac0340a73f960d 252 SUPERFAMILY SSF143422 11 128 4.58E-25 T 18-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 SHALO_0860 c3a263e153f0a6d7997971d68e2ecafc 292 SUPERFAMILY SSF111331 15 290 5.49E-81 T 18-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily SHALO_0860 c3a263e153f0a6d7997971d68e2ecafc 292 Gene3D G3DSA:3.40.50.10330 33 289 1.0E-85 T 18-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 SHALO_0860 c3a263e153f0a6d7997971d68e2ecafc 292 Gene3D G3DSA:2.60.200.30 134 266 1.0E-85 T 18-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 SHALO_0860 c3a263e153f0a6d7997971d68e2ecafc 292 Pfam PF01513 ATP-NAD kinase 68 273 1.1E-49 T 18-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 SHALO_0860 c3a263e153f0a6d7997971d68e2ecafc 292 Hamap MF_00361 NAD kinase [nadK]. 14 289 31.734 T 18-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 SHALO_1408 a3d8c42b100c5b0899c71a5d5b311d4c 396 Pfam PF13520 Amino acid permease 5 379 3.8E-21 T 18-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 SHALO_1408 a3d8c42b100c5b0899c71a5d5b311d4c 396 Gene3D G3DSA:1.20.1740.10 1 396 1.4E-37 T 18-10-2018 SHALO_1408 a3d8c42b100c5b0899c71a5d5b311d4c 396 PIRSF PIRSF006060 1 395 6.9E-31 T 18-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 SHALO_1255 196046dfd4f054a479bc069900eba587 307 Pfam PF14022 Protein of unknown function (DUF4238) 6 286 3.6E-30 T 18-10-2018 IPR025332 Protein of unknown function DUF4238 SHALO_1329 a510793bfe64494a3ee206fa6501d4d9 281 Pfam PF02535 ZIP Zinc transporter 117 273 1.4E-27 T 18-10-2018 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 SHALO_1329 a510793bfe64494a3ee206fa6501d4d9 281 Hamap MF_00548 Zinc transporter ZupT [zupT]. 9 279 32.912 T 18-10-2018 IPR023498 Zinc transporter ZupT SHALO_2573 45d7255a5052dea8e4af3f7a71493010 95 SUPERFAMILY SSF143011 9 91 1.31E-20 T 18-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily SHALO_2573 45d7255a5052dea8e4af3f7a71493010 95 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 11 92 8.0E-11 T 18-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family SHALO_2573 45d7255a5052dea8e4af3f7a71493010 95 Gene3D G3DSA:3.30.2310.20 7 93 1.6E-29 T 18-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily SHALO_2573 45d7255a5052dea8e4af3f7a71493010 95 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 11 92 2.1E-12 T 18-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family SHALO_1131 d96efb2bb6ee91fd13655cd598f4a852 157 SUPERFAMILY SSF55826 4 152 5.62E-32 T 18-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 SHALO_1131 d96efb2bb6ee91fd13655cd598f4a852 157 Pfam PF04073 Aminoacyl-tRNA editing domain 26 139 2.3E-23 T 18-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 SHALO_1131 d96efb2bb6ee91fd13655cd598f4a852 157 Gene3D G3DSA:3.90.960.10 1 156 2.5E-38 T 18-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 SHALO_0137 eb2340acc58054240a4e01919745d4e3 722 SUPERFAMILY SSF51645 5 719 1.31E-259 T 18-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 SHALO_0137 eb2340acc58054240a4e01919745d4e3 722 Gene3D G3DSA:1.20.1220.12 582 722 8.4E-69 T 18-10-2018 SHALO_0137 eb2340acc58054240a4e01919745d4e3 722 Pfam PF01274 Malate synthase 17 694 2.5E-148 T 18-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 SHALO_0137 eb2340acc58054240a4e01919745d4e3 722 Hamap MF_00641 Malate synthase G [glcB]. 1 722 319.225 T 18-10-2018 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 SHALO_0137 eb2340acc58054240a4e01919745d4e3 722 Gene3D G3DSA:2.170.170.11 135 264 1.6E-242 T 18-10-2018 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 SHALO_0137 eb2340acc58054240a4e01919745d4e3 722 Gene3D G3DSA:3.20.20.360 10 580 1.6E-242 T 18-10-2018 SHALO_2231 e5448faf1c6c85c5f7bcb6ed1c1aa3ad 422 Gene3D G3DSA:2.60.120.10 300 418 1.6E-16 T 18-10-2018 IPR014710 RmlC-like jelly roll fold SHALO_2231 e5448faf1c6c85c5f7bcb6ed1c1aa3ad 422 Gene3D G3DSA:3.90.550.10 1 299 4.0E-91 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_2231 e5448faf1c6c85c5f7bcb6ed1c1aa3ad 422 SUPERFAMILY SSF51182 151 421 4.09E-67 T 18-10-2018 IPR011051 RmlC-like cupin domain superfamily SHALO_2231 e5448faf1c6c85c5f7bcb6ed1c1aa3ad 422 Pfam PF01050 Mannose-6-phosphate isomerase 266 415 1.1E-63 T 18-10-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 SHALO_2231 e5448faf1c6c85c5f7bcb6ed1c1aa3ad 422 Pfam PF00483 Nucleotidyl transferase 2 250 4.9E-47 T 18-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 SHALO_2231 e5448faf1c6c85c5f7bcb6ed1c1aa3ad 422 SUPERFAMILY SSF53448 1 250 3.84E-39 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_2231 e5448faf1c6c85c5f7bcb6ed1c1aa3ad 422 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 2 419 1.3E-144 T 18-10-2018 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 SHALO_1385 02d505c349494d2a86ca29a2739cf008 403 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 6 399 1.5E-115 T 18-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 SHALO_1385 02d505c349494d2a86ca29a2739cf008 403 SUPERFAMILY SSF102645 174 401 1.06E-56 T 18-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 SHALO_1385 02d505c349494d2a86ca29a2739cf008 403 Pfam PF02441 Flavoprotein 9 177 4.2E-40 T 18-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 SHALO_1385 02d505c349494d2a86ca29a2739cf008 403 Gene3D G3DSA:3.40.50.10300 188 403 8.6E-59 T 18-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 SHALO_1385 02d505c349494d2a86ca29a2739cf008 403 Gene3D G3DSA:3.40.50.1950 2 187 1.7E-55 T 18-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 SHALO_1385 02d505c349494d2a86ca29a2739cf008 403 SUPERFAMILY SSF52507 5 181 1.83E-54 T 18-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 SHALO_1385 02d505c349494d2a86ca29a2739cf008 403 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 189 376 6.8E-50 T 18-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 SHALO_2556 d3f3ee4fa9a812e4c53191510ec8e5d8 208 PIRSF PIRSF006324 1 208 9.2E-53 T 18-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 SHALO_2556 d3f3ee4fa9a812e4c53191510ec8e5d8 208 Pfam PF01810 LysE type translocator 15 206 1.9E-34 T 18-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 SHALO_1281 e3d7cd184343e0800969f070df2b7dc6 155 Pfam PF00075 RNase H 3 129 2.7E-12 T 18-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 SHALO_1281 e3d7cd184343e0800969f070df2b7dc6 155 Gene3D G3DSA:3.30.420.10 1 154 3.4E-18 T 18-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 SHALO_1281 e3d7cd184343e0800969f070df2b7dc6 155 SUPERFAMILY SSF53098 2 151 1.26E-16 T 18-10-2018 IPR012337 Ribonuclease H-like superfamily SHALO_0733 50fa6f33712d06e26e2b54b72d93d1a9 509 PIRSF PIRSF006446 335 509 8.2E-30 T 18-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 SHALO_0733 50fa6f33712d06e26e2b54b72d93d1a9 509 PIRSF PIRSF006446 2 340 4.1E-107 T 18-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 SHALO_0733 50fa6f33712d06e26e2b54b72d93d1a9 509 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 505 8.8E-169 T 18-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 SHALO_2576 0f956341297edb96224b924f8ce63dae 122 SUPERFAMILY SSF52172 4 120 5.83E-30 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_2576 0f956341297edb96224b924f8ce63dae 122 SMART SM00448 5 117 1.3E-27 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_2576 0f956341297edb96224b924f8ce63dae 122 Pfam PF00072 Response regulator receiver domain 7 115 6.7E-26 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_2576 0f956341297edb96224b924f8ce63dae 122 Gene3D G3DSA:3.40.50.2300 4 122 9.7E-32 T 18-10-2018 SHALO_0636 5e05fbc531d1d4281501f7e7dd19fe5a 346 Pfam PF02653 Branched-chain amino acid transport system / permease component 36 320 9.9E-36 T 18-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 SHALO_1944 559cd52dbc6e7849f3e3ad700f92d04a 107 PIRSF PIRSF003203 1 107 9.8E-34 T 18-10-2018 IPR008407 Branched-chain amino acid transport, AzlD SHALO_1944 559cd52dbc6e7849f3e3ad700f92d04a 107 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 7 102 2.8E-19 T 18-10-2018 IPR008407 Branched-chain amino acid transport, AzlD SHALO_2832 33abbbea7d4f241b712b3a3daf8a05a4 207 SMART SM01144 1 187 1.7E-18 T 18-10-2018 IPR005636 DTW SHALO_2832 33abbbea7d4f241b712b3a3daf8a05a4 207 Pfam PF03942 DTW domain 1 182 1.7E-35 T 18-10-2018 IPR005636 DTW SHALO_2482 52fd7d0f437bc20d427749173074b628 431 Pfam PF00174 Oxidoreductase molybdopterin binding domain 114 273 5.3E-47 T 18-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 SHALO_2482 52fd7d0f437bc20d427749173074b628 431 Pfam PF03404 Mo-co oxidoreductase dimerisation domain 298 414 7.5E-14 T 18-10-2018 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation GO:0016491|GO:0030151|GO:0055114 Reactome: R-HSA-1614517 SHALO_2482 52fd7d0f437bc20d427749173074b628 431 TIGRFAM TIGR04555 sulfite_DH_soxC: sulfite dehydrogenase 10 426 5.8E-180 T 18-10-2018 IPR030835 Sulfite dehydrogenase SoxC SHALO_2482 52fd7d0f437bc20d427749173074b628 431 Gene3D G3DSA:2.60.40.650 299 429 1.1E-42 T 18-10-2018 SHALO_2482 52fd7d0f437bc20d427749173074b628 431 Gene3D G3DSA:3.90.420.10 41 298 2.3E-82 T 18-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 SHALO_2482 52fd7d0f437bc20d427749173074b628 431 PRINTS PR00407 Eukaryotic molybdopterin domain signature 258 271 4.0E-15 T 18-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 SHALO_2482 52fd7d0f437bc20d427749173074b628 431 PRINTS PR00407 Eukaryotic molybdopterin domain signature 338 350 4.0E-15 T 18-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 SHALO_2482 52fd7d0f437bc20d427749173074b628 431 PRINTS PR00407 Eukaryotic molybdopterin domain signature 179 194 4.0E-15 T 18-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 SHALO_2482 52fd7d0f437bc20d427749173074b628 431 PRINTS PR00407 Eukaryotic molybdopterin domain signature 242 255 4.0E-15 T 18-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 SHALO_2482 52fd7d0f437bc20d427749173074b628 431 PRINTS PR00407 Eukaryotic molybdopterin domain signature 102 118 4.0E-15 T 18-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 SHALO_2482 52fd7d0f437bc20d427749173074b628 431 SUPERFAMILY SSF81296 301 417 1.54E-25 T 18-10-2018 IPR014756 Immunoglobulin E-set SHALO_2482 52fd7d0f437bc20d427749173074b628 431 SUPERFAMILY SSF56524 64 292 1.31E-62 T 18-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 SHALO_2765 b33c5ee6eb52ee11b32223e4ab701180 438 PRINTS PR01035 Tetracycline resistance protein signature 98 119 3.8E-5 T 18-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 SHALO_2765 b33c5ee6eb52ee11b32223e4ab701180 438 PRINTS PR01035 Tetracycline resistance protein signature 128 150 3.8E-5 T 18-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 SHALO_2765 b33c5ee6eb52ee11b32223e4ab701180 438 PRINTS PR01035 Tetracycline resistance protein signature 14 30 3.8E-5 T 18-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 SHALO_2765 b33c5ee6eb52ee11b32223e4ab701180 438 PRINTS PR01035 Tetracycline resistance protein signature 293 313 3.8E-5 T 18-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 SHALO_2765 b33c5ee6eb52ee11b32223e4ab701180 438 Pfam PF07690 Major Facilitator Superfamily 9 254 1.4E-33 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SHALO_2765 b33c5ee6eb52ee11b32223e4ab701180 438 Gene3D G3DSA:1.20.1250.20 3 382 2.7E-77 T 18-10-2018 SHALO_2765 b33c5ee6eb52ee11b32223e4ab701180 438 SUPERFAMILY SSF103473 4 381 1.09E-65 T 18-10-2018 IPR036259 MFS transporter superfamily SHALO_0350 c7af958013e41998b5680bf481bfae53 212 Pfam PF00005 ABC transporter 17 158 2.5E-26 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_0350 c7af958013e41998b5680bf481bfae53 212 SMART SM00382 26 205 3.8E-14 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_0350 c7af958013e41998b5680bf481bfae53 212 SUPERFAMILY SSF52540 2 208 6.18E-51 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0350 c7af958013e41998b5680bf481bfae53 212 Gene3D G3DSA:3.40.50.300 1 212 6.0E-52 T 18-10-2018 SHALO_0350 c7af958013e41998b5680bf481bfae53 212 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_2180 cebfb4092171d9ff906e27211428136c 285 SMART SM00342 198 280 2.4E-23 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_2180 cebfb4092171d9ff906e27211428136c 285 Pfam PF12833 Helix-turn-helix domain 204 280 4.8E-20 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_2180 cebfb4092171d9ff906e27211428136c 285 SUPERFAMILY SSF51215 42 169 4.05E-13 T 18-10-2018 IPR037923 Transcription regulator HTH-like SHALO_2180 cebfb4092171d9ff906e27211428136c 285 SUPERFAMILY SSF46689 234 282 3.99E-10 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SHALO_2180 cebfb4092171d9ff906e27211428136c 285 Gene3D G3DSA:2.60.120.10 33 109 5.0E-6 T 18-10-2018 IPR014710 RmlC-like jelly roll fold SHALO_2180 cebfb4092171d9ff906e27211428136c 285 Gene3D G3DSA:1.10.10.60 178 283 3.8E-26 T 18-10-2018 SHALO_2180 cebfb4092171d9ff906e27211428136c 285 Pfam PF02311 AraC-like ligand binding domain 43 148 1.5E-6 T 18-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 SHALO_2180 cebfb4092171d9ff906e27211428136c 285 SUPERFAMILY SSF46689 183 231 2.55E-7 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SHALO_1786 28c7c80ed04773ae06d84eb4f57799c4 790 SUPERFAMILY SSF109604 413 514 5.34E-9 T 18-10-2018 SHALO_1786 28c7c80ed04773ae06d84eb4f57799c4 790 Pfam PF13487 HD domain 649 714 5.6E-21 T 18-10-2018 SHALO_1786 28c7c80ed04773ae06d84eb4f57799c4 790 Pfam PF02743 Cache domain 70 305 4.6E-17 T 18-10-2018 IPR033479 Double Cache domain 1 SHALO_1786 28c7c80ed04773ae06d84eb4f57799c4 790 SMART SM00471 418 732 1.2E-7 T 18-10-2018 IPR003607 HD/PDEase domain SHALO_1786 28c7c80ed04773ae06d84eb4f57799c4 790 SUPERFAMILY SSF109604 648 761 3.77E-10 T 18-10-2018 SHALO_1786 28c7c80ed04773ae06d84eb4f57799c4 790 Gene3D G3DSA:1.10.3210.10 628 773 1.9E-28 T 18-10-2018 SHALO_1786 28c7c80ed04773ae06d84eb4f57799c4 790 Gene3D G3DSA:1.10.3210.10 397 529 1.8E-20 T 18-10-2018 SHALO_1786 28c7c80ed04773ae06d84eb4f57799c4 790 SUPERFAMILY SSF103190 150 223 1.8E-8 T 18-10-2018 IPR029151 Periplasmic sensor-like domain superfamily SHALO_1786 28c7c80ed04773ae06d84eb4f57799c4 790 Gene3D G3DSA:3.30.450.20 154 213 3.9E-22 T 18-10-2018 SHALO_1786 28c7c80ed04773ae06d84eb4f57799c4 790 Gene3D G3DSA:3.30.450.20 214 318 3.9E-22 T 18-10-2018 SHALO_2571 495a974606f8c25cfc43b0eb430f3eaf 405 SMART SM00052 2 250 2.3E-21 T 18-10-2018 IPR001633 EAL domain SHALO_2571 495a974606f8c25cfc43b0eb430f3eaf 405 Pfam PF00563 EAL domain 14 245 1.6E-49 T 18-10-2018 IPR001633 EAL domain SHALO_2571 495a974606f8c25cfc43b0eb430f3eaf 405 SUPERFAMILY SSF141868 14 246 5.62E-57 T 18-10-2018 IPR035919 EAL domain superfamily SHALO_2571 495a974606f8c25cfc43b0eb430f3eaf 405 SUPERFAMILY SSF103190 273 404 9.42E-14 T 18-10-2018 IPR029151 Periplasmic sensor-like domain superfamily SHALO_2571 495a974606f8c25cfc43b0eb430f3eaf 405 Gene3D G3DSA:3.20.20.450 11 238 5.8E-57 T 18-10-2018 IPR035919 EAL domain superfamily SHALO_2371 1953c1f6b99c3f677f48a0119b16c4af 210 PIRSF PIRSF000013 93 208 0.046 T 18-10-2018 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 SHALO_2371 1953c1f6b99c3f677f48a0119b16c4af 210 PIRSF PIRSF000013 5 181 1.6E-12 T 18-10-2018 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 SHALO_2371 1953c1f6b99c3f677f48a0119b16c4af 210 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 11 174 2.3E-33 T 18-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal SHALO_2371 1953c1f6b99c3f677f48a0119b16c4af 210 SUPERFAMILY SSF48695 16 173 6.43E-21 T 18-10-2018 IPR036280 Multiheme cytochrome superfamily SHALO_2371 1953c1f6b99c3f677f48a0119b16c4af 210 Gene3D G3DSA:1.10.3820.10 4 183 3.0E-30 T 18-10-2018 IPR038266 NapC/NirT cytochrome c superfamily SHALO_1878 e5b38a4ae288b71de289dad4e87fc55c 263 Pfam PF00561 alpha/beta hydrolase fold 20 249 1.7E-20 T 18-10-2018 IPR000073 Alpha/beta hydrolase fold-1 SHALO_1878 e5b38a4ae288b71de289dad4e87fc55c 263 Gene3D G3DSA:3.40.50.1820 3 263 1.6E-59 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold SHALO_1878 e5b38a4ae288b71de289dad4e87fc55c 263 PRINTS PR00412 Epoxide hydrolase signature 204 220 8.1E-7 T 18-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 SHALO_1878 e5b38a4ae288b71de289dad4e87fc55c 263 PRINTS PR00412 Epoxide hydrolase signature 237 259 8.1E-7 T 18-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 SHALO_1878 e5b38a4ae288b71de289dad4e87fc55c 263 PRINTS PR00412 Epoxide hydrolase signature 25 43 8.1E-7 T 18-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 SHALO_1878 e5b38a4ae288b71de289dad4e87fc55c 263 PRINTS PR00111 Alpha/beta hydrolase fold signature 44 59 1.5E-5 T 18-10-2018 IPR000073 Alpha/beta hydrolase fold-1 SHALO_1878 e5b38a4ae288b71de289dad4e87fc55c 263 PRINTS PR00111 Alpha/beta hydrolase fold signature 206 220 1.5E-5 T 18-10-2018 IPR000073 Alpha/beta hydrolase fold-1 SHALO_1878 e5b38a4ae288b71de289dad4e87fc55c 263 PRINTS PR00111 Alpha/beta hydrolase fold signature 89 102 1.5E-5 T 18-10-2018 IPR000073 Alpha/beta hydrolase fold-1 SHALO_1878 e5b38a4ae288b71de289dad4e87fc55c 263 SUPERFAMILY SSF53474 9 261 5.63E-53 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold SHALO_1153 ef1b83aca0b0080019c0598e2f86fdd4 716 SUPERFAMILY SSF50978 73 302 4.58E-19 T 18-10-2018 IPR036322 WD40-repeat-containing domain superfamily GO:0005515 SHALO_1153 ef1b83aca0b0080019c0598e2f86fdd4 716 Gene3D G3DSA:2.130.10.10 69 343 8.9E-16 T 18-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 SHALO_1812 daefa1315008e074e222be021485ee3a 206 SUPERFAMILY SSF54001 37 164 2.7E-6 T 18-10-2018 IPR038765 Papain-like cysteine peptidase superfamily SHALO_1812 daefa1315008e074e222be021485ee3a 206 Gene3D G3DSA:3.90.1720.10 33 192 6.0E-13 T 18-10-2018 SHALO_1812 daefa1315008e074e222be021485ee3a 206 Pfam PF00877 NlpC/P60 family 50 168 4.3E-5 T 18-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain SHALO_2342 55d093005ee90367e71bb59964051a83 465 SUPERFAMILY SSF88723 5 157 1.05E-6 T 18-10-2018 IPR029060 PIN-like domain superfamily SHALO_2342 55d093005ee90367e71bb59964051a83 465 Gene3D G3DSA:3.40.50.1010 2 158 7.0E-16 T 18-10-2018 SHALO_2342 55d093005ee90367e71bb59964051a83 465 Gene3D G3DSA:3.40.50.300 230 458 1.8E-42 T 18-10-2018 SHALO_2342 55d093005ee90367e71bb59964051a83 465 Pfam PF02562 PhoH-like protein 233 451 3.0E-47 T 18-10-2018 IPR003714 PhoH-like protein GO:0005524 SHALO_2342 55d093005ee90367e71bb59964051a83 465 SUPERFAMILY SSF52540 232 434 1.6E-19 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_2342 55d093005ee90367e71bb59964051a83 465 Pfam PF13638 PIN domain 7 154 2.0E-22 T 18-10-2018 IPR002716 PIN domain SHALO_2638 dac852d1b70289f31ef94bd6b03c64f7 138 Pfam PF01618 MotA/TolQ/ExbB proton channel family 43 133 1.4E-23 T 18-10-2018 IPR002898 MotA/TolQ/ExbB proton channel SHALO_2775 b7c7c940bffa556a37abe30a30a98c2f 434 SMART SM00382 156 337 3.9E-8 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_2775 b7c7c940bffa556a37abe30a30a98c2f 434 Gene3D G3DSA:3.40.50.12240 14 434 1.3E-138 T 18-10-2018 SHALO_2775 b7c7c940bffa556a37abe30a30a98c2f 434 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 8 433 1.1E-176 T 18-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 SHALO_2775 b7c7c940bffa556a37abe30a30a98c2f 434 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 144 353 1.6E-70 T 18-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 SHALO_2775 b7c7c940bffa556a37abe30a30a98c2f 434 SUPERFAMILY SSF52540 92 359 5.15E-90 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0741 0d41a2aeb9daf03c582bbed9999e80d4 263 Gene3D G3DSA:3.40.50.10860 4 243 9.3E-74 T 18-10-2018 SHALO_0741 0d41a2aeb9daf03c582bbed9999e80d4 263 Gene3D G3DSA:3.40.50.720 99 235 9.3E-74 T 18-10-2018 SHALO_0741 0d41a2aeb9daf03c582bbed9999e80d4 263 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 6 86 7.0E-25 T 18-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 SHALO_0741 0d41a2aeb9daf03c582bbed9999e80d4 263 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 1 259 27.984 T 18-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 SHALO_0741 0d41a2aeb9daf03c582bbed9999e80d4 263 SUPERFAMILY SSF51735 99 259 3.0E-28 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_0741 0d41a2aeb9daf03c582bbed9999e80d4 263 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 3 258 2.2E-68 T 18-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 SHALO_0741 0d41a2aeb9daf03c582bbed9999e80d4 263 SUPERFAMILY SSF53223 2 98 8.06E-29 T 18-10-2018 SHALO_2263 478a933f76a2d3a69efdfb58ddc6b774 243 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 1 243 42.238 T 18-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 SHALO_2263 478a933f76a2d3a69efdfb58ddc6b774 243 SUPERFAMILY SSF88713 1 242 2.82E-94 T 18-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 SHALO_2263 478a933f76a2d3a69efdfb58ddc6b774 243 Pfam PF03746 LamB/YcsF family 3 242 2.9E-97 T 18-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 SHALO_2263 478a933f76a2d3a69efdfb58ddc6b774 243 Gene3D G3DSA:3.20.20.370 1 243 1.7E-100 T 18-10-2018 SHALO_2969 cc7ffec6a61218e87262553800db9a4a 85 SUPERFAMILY SSF117991 3 85 3.4E-21 T 18-10-2018 IPR027471 YbeD-like domain superfamily SHALO_2969 cc7ffec6a61218e87262553800db9a4a 85 Gene3D G3DSA:3.30.70.260 2 85 3.5E-12 T 18-10-2018 SHALO_2969 cc7ffec6a61218e87262553800db9a4a 85 Pfam PF04359 Protein of unknown function (DUF493) 8 85 2.1E-15 T 18-10-2018 IPR007454 Uncharacterised protein family UPF0250 SHALO_2969 cc7ffec6a61218e87262553800db9a4a 85 ProDom PD061650 JHP0447 HP0495 CJ0253 10 85 2.0E-14 T 18-10-2018 SHALO_1223 645a2fab6a3ee7787d950c180dcd4511 283 Pfam PF02498 BRO family, N-terminal domain 22 109 7.9E-8 T 18-10-2018 IPR003497 BRO N-terminal domain SHALO_0779 801d79caa5762df5971ea3563f96b082 396 SUPERFAMILY SSF52540 3 167 2.23E-5 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0779 801d79caa5762df5971ea3563f96b082 396 Gene3D G3DSA:3.40.50.300 1 218 1.8E-28 T 18-10-2018 SHALO_0779 801d79caa5762df5971ea3563f96b082 396 Pfam PF05707 Zonular occludens toxin (Zot) 3 216 3.9E-10 T 18-10-2018 IPR008900 Zona occludens toxin SHALO_1948 8c3e1fecfc3d198393062ea26f2e0157 267 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 18-10-2018 IPR019776 Flagellar basal body rod protein, conserved site SHALO_1948 8c3e1fecfc3d198393062ea26f2e0157 267 SUPERFAMILY SSF117143 97 222 2.09E-12 T 18-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like SHALO_1948 8c3e1fecfc3d198393062ea26f2e0157 267 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 5 140 5.4E-29 T 18-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G SHALO_1948 8c3e1fecfc3d198393062ea26f2e0157 267 Pfam PF00460 Flagella basal body rod protein 9 35 1.4E-5 T 18-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 SHALO_1948 8c3e1fecfc3d198393062ea26f2e0157 267 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 189 249 1.1E-10 T 18-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain SHALO_2570 644e9f5f60db7a26fa1bacea3f1d8c87 157 SUPERFAMILY SSF52141 4 155 4.97E-28 T 18-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 SHALO_2570 644e9f5f60db7a26fa1bacea3f1d8c87 157 Gene3D G3DSA:3.40.470.10 1 157 1.2E-53 T 18-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 SHALO_2570 644e9f5f60db7a26fa1bacea3f1d8c87 157 Pfam PF03167 Uracil DNA glycosylase superfamily 10 152 2.8E-12 T 18-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 SHALO_2570 644e9f5f60db7a26fa1bacea3f1d8c87 157 TIGRFAM TIGR04274 hypoxanDNAglyco: DNA-deoxyinosine glycosylase 5 152 6.6E-41 T 18-10-2018 IPR026353 Hypoxanthine-DNA glycosylase SHALO_0031 61e729728f578ab5bb24e4a5208f7931 607 Pfam PF17425 Arylsulfotransferase Ig-like domain 45 136 3.3E-27 T 18-10-2018 IPR035391 Arylsulfotransferase, Ig-like domain SHALO_0031 61e729728f578ab5bb24e4a5208f7931 607 Gene3D G3DSA:2.60.40.3100 32 140 3.3E-30 T 18-10-2018 IPR038477 Arylsulfotransferase, N-terminal domain superfamily SHALO_0031 61e729728f578ab5bb24e4a5208f7931 607 Pfam PF05935 Arylsulfotransferase (ASST) 154 596 1.7E-142 T 18-10-2018 IPR010262 Arylsulfotransferase, bacteria GO:0004062 SHALO_0481 7ba1f8b902eda7ac1c478e82b7746219 125 SUPERFAMILY SSF50249 2 123 2.06E-50 T 18-10-2018 IPR012340 Nucleic acid-binding, OB-fold SHALO_0481 7ba1f8b902eda7ac1c478e82b7746219 125 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.472 T 18-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_0481 7ba1f8b902eda7ac1c478e82b7746219 125 PRINTS PR01034 Ribosomal protein S12 signature 77 94 2.5E-57 T 18-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_0481 7ba1f8b902eda7ac1c478e82b7746219 125 PRINTS PR01034 Ribosomal protein S12 signature 27 42 2.5E-57 T 18-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_0481 7ba1f8b902eda7ac1c478e82b7746219 125 PRINTS PR01034 Ribosomal protein S12 signature 58 77 2.5E-57 T 18-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_0481 7ba1f8b902eda7ac1c478e82b7746219 125 PRINTS PR01034 Ribosomal protein S12 signature 110 122 2.5E-57 T 18-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_0481 7ba1f8b902eda7ac1c478e82b7746219 125 PRINTS PR01034 Ribosomal protein S12 signature 42 57 2.5E-57 T 18-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_0481 7ba1f8b902eda7ac1c478e82b7746219 125 PRINTS PR01034 Ribosomal protein S12 signature 94 110 2.5E-57 T 18-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_0481 7ba1f8b902eda7ac1c478e82b7746219 125 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 18-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_0481 7ba1f8b902eda7ac1c478e82b7746219 125 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 2 124 1.5E-68 T 18-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_0481 7ba1f8b902eda7ac1c478e82b7746219 125 Pfam PF00164 Ribosomal protein S12/S23 12 123 2.0E-40 T 18-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_0481 7ba1f8b902eda7ac1c478e82b7746219 125 PIRSF PIRSF002133 1 124 1.8E-53 T 18-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_0481 7ba1f8b902eda7ac1c478e82b7746219 125 Gene3D G3DSA:2.40.50.140 1 125 3.3E-61 T 18-10-2018 SHALO_2138 3347ac1d8707b6e0c307c57556ca9641 179 SUPERFAMILY SSF54862 18 101 1.33E-22 T 18-10-2018 SHALO_2138 3347ac1d8707b6e0c307c57556ca9641 179 Gene3D G3DSA:3.30.70.3270 18 158 1.3E-22 T 18-10-2018 SHALO_2138 3347ac1d8707b6e0c307c57556ca9641 179 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 75 86 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_2138 3347ac1d8707b6e0c307c57556ca9641 179 Pfam PF12838 4Fe-4S dicluster domain 40 89 5.8E-12 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_2176 b6cc40cb7cc68c566d5e2f81047608cb 133 Pfam PF07883 Cupin domain 54 121 3.0E-11 T 18-10-2018 IPR013096 Cupin 2, conserved barrel SHALO_2176 b6cc40cb7cc68c566d5e2f81047608cb 133 SUPERFAMILY SSF51182 27 123 1.67E-17 T 18-10-2018 IPR011051 RmlC-like cupin domain superfamily SHALO_2176 b6cc40cb7cc68c566d5e2f81047608cb 133 Gene3D G3DSA:2.60.120.10 31 131 1.8E-15 T 18-10-2018 IPR014710 RmlC-like jelly roll fold SHALO_0981 288bad0071d242264b909f4df3330560 279 SUPERFAMILY SSF55729 183 274 9.51E-13 T 18-10-2018 IPR016181 Acyl-CoA N-acyltransferase SHALO_0981 288bad0071d242264b909f4df3330560 279 Gene3D G3DSA:3.40.630.30 134 265 1.0E-29 T 18-10-2018 SHALO_0981 288bad0071d242264b909f4df3330560 279 Pfam PF12746 GNAT acetyltransferase 34 270 8.7E-31 T 18-10-2018 IPR027365 GNAT acetyltransferase YdfB-like SHALO_2238 2b5924fd558cecb6363833af6e596011 190 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 8 185 1.5E-25 T 18-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 SHALO_0430 573bdb0a186c977618da2bf39fc57057 379 Pfam PF01844 HNH endonuclease 26 67 1.2E-6 T 18-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 SHALO_0430 573bdb0a186c977618da2bf39fc57057 379 SMART SM00507 12 66 4.4E-4 T 18-10-2018 IPR003615 HNH nuclease SHALO_2453 1c6a6265e19bb4b2eeacbf2f5b078eb2 143 Gene3D G3DSA:3.30.420.10 1 141 5.7E-44 T 18-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 SHALO_2453 1c6a6265e19bb4b2eeacbf2f5b078eb2 143 Pfam PF00075 RNase H 2 135 3.8E-38 T 18-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 SHALO_2453 1c6a6265e19bb4b2eeacbf2f5b078eb2 143 SUPERFAMILY SSF53098 1 136 2.53E-42 T 18-10-2018 IPR012337 Ribonuclease H-like superfamily SHALO_2604 a14df162aece53629d3b592a08350f95 433 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 365 1.5E-150 T 18-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 SHALO_2604 a14df162aece53629d3b592a08350f95 433 PIRSF PIRSF004539 1 433 5.1E-181 T 18-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 SHALO_2604 a14df162aece53629d3b592a08350f95 433 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 433 2.0E-192 T 18-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 SHALO_3016 61b7ae54259060e15142a4963c61752e 231 Gene3D G3DSA:2.60.40.4070 105 193 1.8E-19 T 18-10-2018 SHALO_3016 61b7ae54259060e15142a4963c61752e 231 Pfam PF13860 FlgD Ig-like domain 111 184 2.2E-17 T 18-10-2018 IPR025965 FlgD Ig-like domain SHALO_3016 61b7ae54259060e15142a4963c61752e 231 Pfam PF03963 Flagellar hook capping protein - N-terminal region 14 79 4.7E-17 T 18-10-2018 IPR005648 Flagellar hook capping protein SHALO_3016 61b7ae54259060e15142a4963c61752e 231 Gene3D G3DSA:2.30.30.910 92 214 1.8E-19 T 18-10-2018 SHALO_0328 20dd4cc9da7ffad49870a9756c040eb8 250 Gene3D G3DSA:3.40.50.720 1 249 1.3E-70 T 18-10-2018 SHALO_0328 20dd4cc9da7ffad49870a9756c040eb8 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.1E-8 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_0328 20dd4cc9da7ffad49870a9756c040eb8 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 1.1E-8 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_0328 20dd4cc9da7ffad49870a9756c040eb8 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.1E-8 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_0328 20dd4cc9da7ffad49870a9756c040eb8 250 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 248 1.9E-56 T 18-10-2018 SHALO_0328 20dd4cc9da7ffad49870a9756c040eb8 250 SUPERFAMILY SSF51735 2 249 4.31E-72 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_0328 20dd4cc9da7ffad49870a9756c040eb8 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 3.0E-33 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_0328 20dd4cc9da7ffad49870a9756c040eb8 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 3.0E-33 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_0328 20dd4cc9da7ffad49870a9756c040eb8 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 3.0E-33 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_0328 20dd4cc9da7ffad49870a9756c040eb8 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 3.0E-33 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_0328 20dd4cc9da7ffad49870a9756c040eb8 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 3.0E-33 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_0328 20dd4cc9da7ffad49870a9756c040eb8 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 3.0E-33 T 18-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_2129 3ddb1c068863cacfc67d1b219ec27273 218 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 85 96 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_2129 3ddb1c068863cacfc67d1b219ec27273 218 Pfam PF12838 4Fe-4S dicluster domain 85 153 7.6E-9 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_2129 3ddb1c068863cacfc67d1b219ec27273 218 Gene3D G3DSA:3.30.70.20 44 159 1.7E-21 T 18-10-2018 SHALO_2129 3ddb1c068863cacfc67d1b219ec27273 218 SUPERFAMILY SSF54862 4 158 5.44E-32 T 18-10-2018 SHALO_2563 aca33d81559f378479ebbdfa82487a49 207 PIRSF PIRSF006324 1 206 2.0E-47 T 18-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 SHALO_2563 aca33d81559f378479ebbdfa82487a49 207 Pfam PF01810 LysE type translocator 15 201 2.6E-27 T 18-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 SHALO_1042 ab8c55f3a1b7e770a18f01042eed38e6 203 Gene3D G3DSA:3.40.50.12740 6 203 8.7E-24 T 18-10-2018 SHALO_1042 ab8c55f3a1b7e770a18f01042eed38e6 203 SMART SM00421 146 203 8.5E-18 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SHALO_1042 ab8c55f3a1b7e770a18f01042eed38e6 203 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 202 1.9E-14 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SHALO_1042 ab8c55f3a1b7e770a18f01042eed38e6 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 8.2E-11 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SHALO_1042 ab8c55f3a1b7e770a18f01042eed38e6 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 8.2E-11 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SHALO_1042 ab8c55f3a1b7e770a18f01042eed38e6 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 8.2E-11 T 18-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SHALO_1042 ab8c55f3a1b7e770a18f01042eed38e6 203 SUPERFAMILY SSF46894 133 202 2.72E-17 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHALO_0155 64b3e2ee238736509c7f9b6cc4986e64 223 Pfam PF13489 Methyltransferase domain 76 211 2.6E-20 T 18-10-2018 SHALO_0155 64b3e2ee238736509c7f9b6cc4986e64 223 Gene3D G3DSA:3.40.50.150 51 219 3.3E-19 T 18-10-2018 SHALO_0155 64b3e2ee238736509c7f9b6cc4986e64 223 SUPERFAMILY SSF53335 76 213 3.38E-22 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_2658 37a1aacfd73fb6868291944a06af03db 65 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 4 25 7.3E-4 T 18-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal SHALO_0875 b57cb6ac94aaafdd4de4201a21bb1f17 192 Pfam PF01965 DJ-1/PfpI family 4 168 1.2E-27 T 18-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 SHALO_0875 b57cb6ac94aaafdd4de4201a21bb1f17 192 Gene3D G3DSA:3.40.50.880 1 191 1.3E-59 T 18-10-2018 IPR029062 Class I glutamine amidotransferase-like SHALO_0875 b57cb6ac94aaafdd4de4201a21bb1f17 192 SUPERFAMILY SSF52317 1 186 3.59E-44 T 18-10-2018 IPR029062 Class I glutamine amidotransferase-like SHALO_1572 ad95d295b93402126d9fc1a23e249343 361 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 152 248 1.8E-20 T 18-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 SHALO_1572 ad95d295b93402126d9fc1a23e249343 361 SUPERFAMILY SSF161098 152 342 1.44E-37 T 18-10-2018 IPR035906 MetI-like superfamily SHALO_1572 ad95d295b93402126d9fc1a23e249343 361 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 170 356 6.3E-23 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 SHALO_1572 ad95d295b93402126d9fc1a23e249343 361 Gene3D G3DSA:1.10.3720.10 147 359 1.2E-43 T 18-10-2018 IPR035906 MetI-like superfamily SHALO_2817 d80dbbc4df020c408351a33bdf1d4650 97 SUPERFAMILY SSF54909 2 91 1.32E-22 T 18-10-2018 IPR011008 Dimeric alpha-beta barrel SHALO_2817 d80dbbc4df020c408351a33bdf1d4650 97 Pfam PF03992 Antibiotic biosynthesis monooxygenase 4 78 2.9E-13 T 18-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain SHALO_2817 d80dbbc4df020c408351a33bdf1d4650 97 Gene3D G3DSA:3.30.70.100 3 97 2.3E-23 T 18-10-2018 SHALO_1147 151d8db7b81d5d7ddc0f5d60d40887e8 601 Pfam PF00664 ABC transporter transmembrane region 57 308 4.6E-21 T 18-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 SHALO_1147 151d8db7b81d5d7ddc0f5d60d40887e8 601 SUPERFAMILY SSF52540 349 587 4.99E-81 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_1147 151d8db7b81d5d7ddc0f5d60d40887e8 601 Pfam PF00005 ABC transporter 372 520 6.2E-30 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_1147 151d8db7b81d5d7ddc0f5d60d40887e8 601 SUPERFAMILY SSF90123 8 336 1.44E-49 T 18-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 SHALO_1147 151d8db7b81d5d7ddc0f5d60d40887e8 601 ProSitePatterns PS00211 ABC transporters family signature. 492 506 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_1147 151d8db7b81d5d7ddc0f5d60d40887e8 601 Gene3D G3DSA:1.20.1560.10 1 340 5.7E-49 T 18-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 SHALO_1147 151d8db7b81d5d7ddc0f5d60d40887e8 601 Gene3D G3DSA:3.40.50.300 346 601 1.1E-85 T 18-10-2018 SHALO_1147 151d8db7b81d5d7ddc0f5d60d40887e8 601 SMART SM00382 381 566 1.0E-13 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_0402 af4c0941321dc30262b2f045b7511129 169 PIRSF PIRSF026509 1 169 3.0E-42 T 18-10-2018 IPR005134 Uncharacterised protein family UPF0114 SHALO_0402 af4c0941321dc30262b2f045b7511129 169 Pfam PF03350 Uncharacterized protein family, UPF0114 10 134 2.0E-32 T 18-10-2018 IPR005134 Uncharacterised protein family UPF0114 SHALO_2001 cb34751972ac9b91c878c221727da62b 527 Pfam PF02355 Protein export membrane protein 339 497 1.3E-14 T 18-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial SHALO_2001 cb34751972ac9b91c878c221727da62b 527 SUPERFAMILY SSF82866 313 510 5.1E-39 T 18-10-2018 SHALO_2001 cb34751972ac9b91c878c221727da62b 527 Gene3D G3DSA:3.30.70.3400 135 340 4.8E-58 T 18-10-2018 SHALO_2001 cb34751972ac9b91c878c221727da62b 527 Gene3D G3DSA:1.20.1640.10 351 506 2.0E-8 T 18-10-2018 SHALO_2001 cb34751972ac9b91c878c221727da62b 527 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 515 40.132 T 18-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 SHALO_2001 cb34751972ac9b91c878c221727da62b 527 Gene3D G3DSA:3.30.1360.200 194 334 4.8E-58 T 18-10-2018 SHALO_2001 cb34751972ac9b91c878c221727da62b 527 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 266 496 2.9E-77 T 18-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SHALO_2001 cb34751972ac9b91c878c221727da62b 527 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 39 502 4.0E-137 T 18-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 SHALO_2001 cb34751972ac9b91c878c221727da62b 527 PRINTS PR00702 Acriflavin resistance protein family signature 405 429 2.6E-5 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SHALO_2001 cb34751972ac9b91c878c221727da62b 527 PRINTS PR00702 Acriflavin resistance protein family signature 352 375 2.6E-5 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SHALO_2001 cb34751972ac9b91c878c221727da62b 527 PRINTS PR00702 Acriflavin resistance protein family signature 480 503 2.6E-5 T 18-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SHALO_2635 630524060d86c91dc28a8686a426618b 668 SUPERFAMILY SSF56935 24 668 1.03E-81 T 18-10-2018 SHALO_2635 630524060d86c91dc28a8686a426618b 668 Gene3D G3DSA:2.40.170.20 142 668 1.6E-78 T 18-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily SHALO_2635 630524060d86c91dc28a8686a426618b 668 Gene3D G3DSA:2.170.130.10 35 141 5.1E-6 T 18-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily SHALO_2635 630524060d86c91dc28a8686a426618b 668 Pfam PF07715 TonB-dependent Receptor Plug Domain 37 123 1.2E-6 T 18-10-2018 IPR012910 TonB-dependent receptor, plug domain SHALO_2635 630524060d86c91dc28a8686a426618b 668 Pfam PF00593 TonB dependent receptor 194 667 1.7E-34 T 18-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel SHALO_2403 7eeea5942348f4b023ece76c21fbbf0e 361 Gene3D G3DSA:2.30.42.10 176 258 2.9E-9 T 18-10-2018 SHALO_2403 7eeea5942348f4b023ece76c21fbbf0e 361 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 293 346 2.7E-6 T 18-10-2018 IPR001478 PDZ domain GO:0005515 SHALO_2403 7eeea5942348f4b023ece76c21fbbf0e 361 SMART SM00228 286 352 4.8E-5 T 18-10-2018 IPR001478 PDZ domain GO:0005515 SHALO_2403 7eeea5942348f4b023ece76c21fbbf0e 361 SMART SM00228 183 251 0.13 T 18-10-2018 IPR001478 PDZ domain GO:0005515 SHALO_2403 7eeea5942348f4b023ece76c21fbbf0e 361 Pfam PF13180 PDZ domain 185 251 9.0E-7 T 18-10-2018 IPR001478 PDZ domain GO:0005515 SHALO_2403 7eeea5942348f4b023ece76c21fbbf0e 361 Gene3D G3DSA:2.30.42.10 288 361 1.1E-9 T 18-10-2018 SHALO_2403 7eeea5942348f4b023ece76c21fbbf0e 361 SUPERFAMILY SSF50156 285 360 1.21E-10 T 18-10-2018 IPR036034 PDZ superfamily GO:0005515 SHALO_2403 7eeea5942348f4b023ece76c21fbbf0e 361 SUPERFAMILY SSF50156 171 255 6.05E-9 T 18-10-2018 IPR036034 PDZ superfamily GO:0005515 SHALO_1390 3e5550b2674e1069eeb7119f5b924f7f 196 Pfam PF02525 Flavodoxin-like fold 2 183 4.5E-32 T 18-10-2018 IPR003680 Flavodoxin-like fold SHALO_1390 3e5550b2674e1069eeb7119f5b924f7f 196 SUPERFAMILY SSF52218 1 195 2.46E-35 T 18-10-2018 IPR029039 Flavoprotein-like superfamily SHALO_1390 3e5550b2674e1069eeb7119f5b924f7f 196 Gene3D G3DSA:3.40.50.360 1 196 5.4E-53 T 18-10-2018 IPR029039 Flavoprotein-like superfamily SHALO_2343 fe7015cc95b5086e5ac627e70db2e17e 257 Pfam PF00149 Calcineurin-like phosphoesterase 16 217 1.6E-12 T 18-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 SHALO_2343 fe7015cc95b5086e5ac627e70db2e17e 257 SUPERFAMILY SSF56300 15 254 4.71E-31 T 18-10-2018 SHALO_2343 fe7015cc95b5086e5ac627e70db2e17e 257 Gene3D G3DSA:3.60.21.10 14 253 2.0E-21 T 18-10-2018 IPR029052 Metallo-dependent phosphatase-like SHALO_1382 d8f9cffe9c15e07d2af302ca7ce272d9 341 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 318 1.4E-35 T 18-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 SHALO_0688 f525ca4fe7b0b822d57902965d3be04a 167 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 2 165 27.89 T 18-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 SHALO_0688 f525ca4fe7b0b822d57902965d3be04a 167 Pfam PF00691 OmpA family 62 159 3.8E-17 T 18-10-2018 IPR006665 OmpA-like domain SHALO_0688 f525ca4fe7b0b822d57902965d3be04a 167 SUPERFAMILY SSF103088 59 167 3.92E-29 T 18-10-2018 IPR036737 OmpA-like domain superfamily SHALO_0688 f525ca4fe7b0b822d57902965d3be04a 167 Gene3D G3DSA:3.30.1330.60 32 164 2.2E-34 T 18-10-2018 IPR036737 OmpA-like domain superfamily SHALO_0688 f525ca4fe7b0b822d57902965d3be04a 167 PRINTS PR01021 OMPA domain signature 110 126 5.9E-15 T 18-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SHALO_0688 f525ca4fe7b0b822d57902965d3be04a 167 PRINTS PR01021 OMPA domain signature 95 110 5.9E-15 T 18-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SHALO_0688 f525ca4fe7b0b822d57902965d3be04a 167 PRINTS PR01021 OMPA domain signature 63 85 5.9E-15 T 18-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SHALO_1668 e5a99a97a469bf44a4273dbbef3ac27d 409 Gene3D G3DSA:1.20.1600.10 19 408 9.1E-53 T 18-10-2018 SHALO_1668 e5a99a97a469bf44a4273dbbef3ac27d 409 Pfam PF02321 Outer membrane efflux protein 224 401 2.1E-23 T 18-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 SHALO_1668 e5a99a97a469bf44a4273dbbef3ac27d 409 Pfam PF02321 Outer membrane efflux protein 21 201 3.4E-19 T 18-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 SHALO_1668 e5a99a97a469bf44a4273dbbef3ac27d 409 SUPERFAMILY SSF56954 5 401 1.14E-54 T 18-10-2018 SHALO_2386 9577fab97a9c9d59f0e32c05e4158ab5 221 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 3 220 1.9E-88 T 18-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO SHALO_2386 9577fab97a9c9d59f0e32c05e4158ab5 221 SUPERFAMILY SSF46626 15 221 2.47E-20 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_2386 9577fab97a9c9d59f0e32c05e4158ab5 221 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 3 220 2.8E-84 T 18-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO SHALO_2386 9577fab97a9c9d59f0e32c05e4158ab5 221 Gene3D G3DSA:1.10.760.10 37 221 1.0E-48 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_1392 a78ef8239cdbc50aea4db3c512bd8885 103 Pfam PF01910 Thiamine-binding protein 5 94 9.3E-20 T 18-10-2018 IPR002767 Thiamine-binding protein SHALO_1392 a78ef8239cdbc50aea4db3c512bd8885 103 Gene3D G3DSA:3.30.70.930 1 96 8.6E-22 T 18-10-2018 IPR029756 MTH1187/YkoF-like SHALO_1392 a78ef8239cdbc50aea4db3c512bd8885 103 SUPERFAMILY SSF89957 1 97 3.53E-21 T 18-10-2018 IPR029756 MTH1187/YkoF-like SHALO_0147 d4143258cee6e34b10cad401aef96216 244 SUPERFAMILY SSF52540 6 236 6.07E-60 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0147 d4143258cee6e34b10cad401aef96216 244 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_0147 d4143258cee6e34b10cad401aef96216 244 Gene3D G3DSA:3.40.50.300 2 244 1.7E-61 T 18-10-2018 SHALO_0147 d4143258cee6e34b10cad401aef96216 244 Pfam PF00005 ABC transporter 23 172 2.2E-30 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_0147 d4143258cee6e34b10cad401aef96216 244 SMART SM00382 31 221 4.8E-14 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_0394 6795c6f30296a41b06120ad01b715579 190 SUPERFAMILY SSF53271 46 189 9.35E-14 T 18-10-2018 IPR029057 Phosphoribosyltransferase-like SHALO_0394 6795c6f30296a41b06120ad01b715579 190 Gene3D G3DSA:3.40.50.2020 94 190 1.2E-9 T 18-10-2018 SHALO_0394 6795c6f30296a41b06120ad01b715579 190 Pfam PF00156 Phosphoribosyl transferase domain 151 188 2.0E-6 T 18-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 SHALO_1924 598f8929c9850b2d847ad626a308c6b0 65 Pfam PF09962 Uncharacterized conserved protein (DUF2196) 4 63 2.6E-31 T 18-10-2018 IPR019240 Protein of unknown function DUF2196 SHALO_1924 598f8929c9850b2d847ad626a308c6b0 65 TIGRFAM TIGR03833 TIGR03833: conserved hypothetical protein 4 63 7.8E-34 T 18-10-2018 IPR019240 Protein of unknown function DUF2196 SHALO_1858 89a0e8d7aac69a5b96e264d8112e6e1d 151 SUPERFAMILY SSF47175 56 143 4.56E-6 T 18-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 SHALO_1896 ff31ea785f35fa2e52f92b628fedbe01 381 SUPERFAMILY SSF160996 183 325 2.75E-27 T 18-10-2018 SHALO_1896 ff31ea785f35fa2e52f92b628fedbe01 381 Gene3D G3DSA:1.10.8.260 253 307 5.5E-103 T 18-10-2018 IPR023166 HI0933-like insert domain superfamily SHALO_1896 ff31ea785f35fa2e52f92b628fedbe01 381 Gene3D G3DSA:3.50.50.60 9 373 5.5E-103 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SHALO_1896 ff31ea785f35fa2e52f92b628fedbe01 381 Gene3D G3DSA:2.40.30.10 182 324 5.5E-103 T 18-10-2018 SHALO_1896 ff31ea785f35fa2e52f92b628fedbe01 381 SUPERFAMILY SSF51905 4 374 7.24E-33 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SHALO_1896 ff31ea785f35fa2e52f92b628fedbe01 381 Pfam PF03486 HI0933-like protein 5 373 2.4E-100 T 18-10-2018 SHALO_1896 ff31ea785f35fa2e52f92b628fedbe01 381 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 7 373 1.7E-100 T 18-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like SHALO_2994 fa1099b675896c486c7bcca0dc047486 807 Gene3D G3DSA:3.40.50.740 102 522 3.4E-111 T 18-10-2018 SHALO_2994 fa1099b675896c486c7bcca0dc047486 807 Pfam PF00384 Molybdopterin oxidoreductase 100 519 1.1E-56 T 18-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_2994 fa1099b675896c486c7bcca0dc047486 807 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 43 96 5.2E-9 T 18-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_2994 fa1099b675896c486c7bcca0dc047486 807 Gene3D G3DSA:2.20.25.90 38 101 5.3E-21 T 18-10-2018 SHALO_2994 fa1099b675896c486c7bcca0dc047486 807 Pfam PF01568 Molydopterin dinucleotide binding domain 685 800 8.4E-19 T 18-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 SHALO_2994 fa1099b675896c486c7bcca0dc047486 807 SUPERFAMILY SSF53706 44 674 1.7E-135 T 18-10-2018 SHALO_2994 fa1099b675896c486c7bcca0dc047486 807 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 461 478 - T 18-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 SHALO_2994 fa1099b675896c486c7bcca0dc047486 807 Gene3D G3DSA:3.40.228.10 186 375 3.4E-111 T 18-10-2018 SHALO_2994 fa1099b675896c486c7bcca0dc047486 807 SUPERFAMILY SSF50692 646 807 2.12E-26 T 18-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily SHALO_2994 fa1099b675896c486c7bcca0dc047486 807 Gene3D G3DSA:2.40.40.20 669 807 4.8E-40 T 18-10-2018 SHALO_2994 fa1099b675896c486c7bcca0dc047486 807 SMART SM00926 43 97 7.8E-13 T 18-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0893 956097993731d4b89ff3028dd5fc4cc5 216 Gene3D G3DSA:3.90.1720.10 22 174 1.2E-6 T 18-10-2018 SHALO_1616 6570189f1fde991fc37fad25a4b898e9 194 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 1 188 1.3E-36 T 18-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 SHALO_1616 6570189f1fde991fc37fad25a4b898e9 194 Hamap MF_00165 Thymidylate kinase [tmk]. 1 192 18.044 T 18-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 SHALO_1616 6570189f1fde991fc37fad25a4b898e9 194 Pfam PF02223 Thymidylate kinase 5 188 8.7E-31 T 18-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 SHALO_1616 6570189f1fde991fc37fad25a4b898e9 194 SUPERFAMILY SSF52540 1 193 5.22E-29 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_1616 6570189f1fde991fc37fad25a4b898e9 194 Gene3D G3DSA:3.40.50.300 1 193 6.5E-36 T 18-10-2018 SHALO_0395 6a4d3048532ee7317fdc444b8f9ff81a 168 ProSitePatterns PS00028 Zinc finger C2H2 type domain signature. 101 124 - T 18-10-2018 IPR013087 Zinc finger C2H2-type GO:0003676 SHALO_1412 57e685e3bc36d63ec2b04179d749905b 374 TIGRFAM TIGR00075 hypD: hydrogenase expression/formation protein HypD 1 367 3.3E-152 T 18-10-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 SHALO_1412 57e685e3bc36d63ec2b04179d749905b 374 Gene3D G3DSA:3.40.50.11740 62 300 5.8E-109 T 18-10-2018 SHALO_1412 57e685e3bc36d63ec2b04179d749905b 374 Pfam PF01924 Hydrogenase formation hypA family 16 365 1.1E-152 T 18-10-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 SHALO_1412 57e685e3bc36d63ec2b04179d749905b 374 Gene3D G3DSA:1.10.10.2140 316 368 4.2E-25 T 18-10-2018 SHALO_1412 57e685e3bc36d63ec2b04179d749905b 374 Gene3D G3DSA:3.40.50.11750 25 259 5.8E-109 T 18-10-2018 SHALO_1412 57e685e3bc36d63ec2b04179d749905b 374 PIRSF PIRSF005622 4 370 9.0E-163 T 18-10-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 SHALO_0222 fef9b25e7a8b0cfdd3bffc8db73b2a37 178 Pfam PF09624 Protein of unknown function (DUF2393) 35 178 3.5E-29 T 18-10-2018 IPR013417 Conserved hypothetical protein CHP02588 SHALO_1630 555fb832080cb9cb6528f13ca570002d 248 SMART SM01001 119 248 1.4E-29 T 18-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 SHALO_1630 555fb832080cb9cb6528f13ca570002d 248 Gene3D G3DSA:3.40.50.7700 120 248 2.9E-32 T 18-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 SHALO_1630 555fb832080cb9cb6528f13ca570002d 248 Pfam PF00731 AIR carboxylase 121 243 4.0E-14 T 18-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 SHALO_1630 555fb832080cb9cb6528f13ca570002d 248 SUPERFAMILY SSF52255 120 247 2.35E-27 T 18-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 SHALO_2194 62f3d8ed5ee94703474c15a4f5c3ddee 283 SUPERFAMILY SSF103481 33 129 4.84E-14 T 18-10-2018 SHALO_2194 62f3d8ed5ee94703474c15a4f5c3ddee 283 Pfam PF00892 EamA-like transporter family 1 125 8.3E-17 T 18-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 SHALO_2194 62f3d8ed5ee94703474c15a4f5c3ddee 283 SUPERFAMILY SSF103481 195 279 1.83E-6 T 18-10-2018 SHALO_0626 5a57733647057ffe303e032fb6a53fb7 65 Pfam PF10049 Protein of unknown function (DUF2283) 2 49 1.2E-11 T 18-10-2018 IPR019270 Protein of unknown function DUF2283 SHALO_0724 22e5971c48f9f3204482e93f83bb80b9 269 Gene3D G3DSA:1.10.3210.10 1 267 1.2E-56 T 18-10-2018 SHALO_0724 22e5971c48f9f3204482e93f83bb80b9 269 Pfam PF08668 HDOD domain 12 207 1.3E-39 T 18-10-2018 IPR013976 Metal-dependent hydrolase HDOD SHALO_0724 22e5971c48f9f3204482e93f83bb80b9 269 SUPERFAMILY SSF109604 2 258 1.57E-48 T 18-10-2018 SHALO_2962 56a45bc6fca84f6e820c9ce5c250653b 389 Pfam PF00990 Diguanylate cyclase, GGDEF domain 24 124 2.6E-12 T 18-10-2018 IPR000160 GGDEF domain SHALO_2962 56a45bc6fca84f6e820c9ce5c250653b 389 SMART SM00267 1 147 3.1E-5 T 18-10-2018 IPR000160 GGDEF domain SHALO_2962 56a45bc6fca84f6e820c9ce5c250653b 389 SUPERFAMILY SSF55073 22 146 8.63E-14 T 18-10-2018 IPR029787 Nucleotide cyclase SHALO_2962 56a45bc6fca84f6e820c9ce5c250653b 389 SMART SM00052 159 384 1.3E-9 T 18-10-2018 IPR001633 EAL domain SHALO_2962 56a45bc6fca84f6e820c9ce5c250653b 389 Gene3D G3DSA:3.30.70.270 1 154 1.4E-15 T 18-10-2018 SHALO_2962 56a45bc6fca84f6e820c9ce5c250653b 389 SUPERFAMILY SSF141868 166 386 4.05E-32 T 18-10-2018 IPR035919 EAL domain superfamily SHALO_2962 56a45bc6fca84f6e820c9ce5c250653b 389 Gene3D G3DSA:3.20.20.450 158 389 2.0E-35 T 18-10-2018 IPR035919 EAL domain superfamily SHALO_2962 56a45bc6fca84f6e820c9ce5c250653b 389 Pfam PF00563 EAL domain 166 385 4.6E-29 T 18-10-2018 IPR001633 EAL domain SHALO_1116 8c3a98d069fdfd75d33deacee7316254 131 Hamap MF_01185 Flagellar assembly factor FliW [fliW]. 1 120 18.687 T 18-10-2018 IPR003775 Flagellar assembly factor FliW GO:0044780 SHALO_1116 8c3a98d069fdfd75d33deacee7316254 131 SUPERFAMILY SSF141457 2 113 1.44E-27 T 18-10-2018 IPR024046 Flagellar assembly factor FliW domain superfamily SHALO_1116 8c3a98d069fdfd75d33deacee7316254 131 Pfam PF02623 FliW protein 4 112 1.1E-25 T 18-10-2018 IPR003775 Flagellar assembly factor FliW GO:0044780 SHALO_1116 8c3a98d069fdfd75d33deacee7316254 131 Gene3D G3DSA:2.30.290.10 1 122 3.6E-20 T 18-10-2018 IPR024046 Flagellar assembly factor FliW domain superfamily SHALO_2852 e8dced2a891c64ea8da6d81075e55215 292 Gene3D G3DSA:3.40.50.620 2 226 4.2E-53 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_2852 e8dced2a891c64ea8da6d81075e55215 292 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 25 244 3.5E-39 T 18-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 SHALO_2852 e8dced2a891c64ea8da6d81075e55215 292 PIRSF PIRSF002936 1 230 4.5E-88 T 18-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 SHALO_2852 e8dced2a891c64ea8da6d81075e55215 292 PIRSF PIRSF002936 227 292 7.8E-18 T 18-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 SHALO_2852 e8dced2a891c64ea8da6d81075e55215 292 SUPERFAMILY SSF52402 2 225 2.05E-52 T 18-10-2018 SHALO_1426 df3c3e60e8f00d140bfb92ea9b398aea 185 SUPERFAMILY SSF53323 2 180 1.03E-34 T 18-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 SHALO_1426 df3c3e60e8f00d140bfb92ea9b398aea 185 Gene3D G3DSA:3.40.920.10 1 184 4.5E-54 T 18-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 SHALO_1426 df3c3e60e8f00d140bfb92ea9b398aea 185 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 11 175 4.5E-25 T 18-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 SHALO_1919 e1770e99c5e2a6049ec53c5c1a95f15d 213 Gene3D G3DSA:3.40.50.360 2 210 3.8E-39 T 18-10-2018 IPR029039 Flavoprotein-like superfamily SHALO_1919 e1770e99c5e2a6049ec53c5c1a95f15d 213 SUPERFAMILY SSF52218 1 192 3.88E-47 T 18-10-2018 IPR029039 Flavoprotein-like superfamily SHALO_1919 e1770e99c5e2a6049ec53c5c1a95f15d 213 Pfam PF03358 NADPH-dependent FMN reductase 1 159 3.3E-32 T 18-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 SHALO_2372 eb5ad43df0cef5762c0a81715d9e9e09 145 Pfam PF14537 Cytochrome c3 49 134 6.3E-15 T 18-10-2018 IPR012286 Tetrahaem cytochrome domain KEGG: 00020+1.3.5.4|KEGG: 00620+1.3.5.4|KEGG: 00650+1.3.5.4|KEGG: 00720+1.3.5.4|MetaCyc: PWY-5392|MetaCyc: PWY-5913|MetaCyc: PWY-7384 SHALO_2372 eb5ad43df0cef5762c0a81715d9e9e09 145 SUPERFAMILY SSF48695 39 135 1.77E-14 T 18-10-2018 IPR036280 Multiheme cytochrome superfamily SHALO_2372 eb5ad43df0cef5762c0a81715d9e9e09 145 Gene3D G3DSA:1.10.1130.10 45 143 4.4E-18 T 18-10-2018 SHALO_1030 ccfa349690ddc0b4aea1bd27a8b7fa66 126 SUPERFAMILY SSF47413 2 60 9.48E-7 T 18-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 SHALO_1030 ccfa349690ddc0b4aea1bd27a8b7fa66 126 SMART SM00530 9 63 0.001 T 18-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SHALO_1030 ccfa349690ddc0b4aea1bd27a8b7fa66 126 Pfam PF01381 Helix-turn-helix 10 61 2.5E-6 T 18-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SHALO_1030 ccfa349690ddc0b4aea1bd27a8b7fa66 126 Gene3D G3DSA:1.10.260.40 1 67 6.8E-9 T 18-10-2018 SHALO_0384 1da3f3ad48eb80ba08bcdc98167e0557 223 SUPERFAMILY SSF102405 4 190 1.68E-52 T 18-10-2018 SHALO_0384 1da3f3ad48eb80ba08bcdc98167e0557 223 Pfam PF03641 Possible lysine decarboxylase 59 190 1.3E-31 T 18-10-2018 IPR031100 LOG family SHALO_0384 1da3f3ad48eb80ba08bcdc98167e0557 223 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 17 191 3.2E-43 T 18-10-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG SHALO_0384 1da3f3ad48eb80ba08bcdc98167e0557 223 Gene3D G3DSA:3.40.50.450 10 221 6.4E-60 T 18-10-2018 SHALO_2341 5e6deb3ed499016c88f8d23b4edd0c01 465 Pfam PF00999 Sodium/hydrogen exchanger family 68 454 1.0E-61 T 18-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 SHALO_2341 5e6deb3ed499016c88f8d23b4edd0c01 465 Gene3D G3DSA:1.20.1530.20 62 461 4.6E-98 T 18-10-2018 IPR038770 Sodium/solute symporter superfamily SHALO_2153 ca82fbbe4d7f08b5d36106cd86c4b2da 295 SUPERFAMILY SSF52172 1 128 1.31E-18 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_2153 ca82fbbe4d7f08b5d36106cd86c4b2da 295 Pfam PF00072 Response regulator receiver domain 3 105 1.4E-7 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_2153 ca82fbbe4d7f08b5d36106cd86c4b2da 295 Gene3D G3DSA:1.10.10.60 262 295 2.9E-5 T 18-10-2018 SHALO_2153 ca82fbbe4d7f08b5d36106cd86c4b2da 295 PIRSF PIRSF016788 1 295 3.6E-97 T 18-10-2018 IPR014483 Fis-like DNA-binding domain-containing signal transduction response regulator, predicted SHALO_2153 ca82fbbe4d7f08b5d36106cd86c4b2da 295 Gene3D G3DSA:3.40.50.2300 1 116 1.2E-16 T 18-10-2018 SHALO_2153 ca82fbbe4d7f08b5d36106cd86c4b2da 295 SMART SM00448 1 105 1.4E-7 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_2418 bbc8da3fdeb7d5719560be80fe076b13 134 SUPERFAMILY SSF52080 4 123 9.81E-31 T 18-10-2018 IPR036227 Ribosomal L18e/L15P superfamily SHALO_2418 bbc8da3fdeb7d5719560be80fe076b13 134 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 123 1.8E-20 T 18-10-2018 IPR021131 Ribosomal protein L18e/L15P SHALO_2418 bbc8da3fdeb7d5719560be80fe076b13 134 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 3 127 4.5E-39 T 18-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_2418 bbc8da3fdeb7d5719560be80fe076b13 134 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 129 14.006 T 18-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 SHALO_2846 e45f23d53b71f8abae4a1efc0ba9c3a6 317 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_2846 e45f23d53b71f8abae4a1efc0ba9c3a6 317 SMART SM00382 31 211 1.1E-13 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_2846 e45f23d53b71f8abae4a1efc0ba9c3a6 317 SUPERFAMILY SSF52540 4 240 2.84E-72 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_2846 e45f23d53b71f8abae4a1efc0ba9c3a6 317 Pfam PF00005 ABC transporter 23 161 1.2E-34 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_2846 e45f23d53b71f8abae4a1efc0ba9c3a6 317 Gene3D G3DSA:3.40.50.300 2 254 1.8E-66 T 18-10-2018 SHALO_2142 49594ee67465c7f07ac941d0db6671e5 844 Gene3D G3DSA:3.90.550.10 404 626 2.7E-52 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_2142 49594ee67465c7f07ac941d0db6671e5 844 Pfam PF13641 Glycosyltransferase like family 2 414 642 1.4E-26 T 18-10-2018 SHALO_2142 49594ee67465c7f07ac941d0db6671e5 844 SUPERFAMILY SSF53448 411 677 2.38E-41 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_2142 49594ee67465c7f07ac941d0db6671e5 844 Gene3D G3DSA:3.20.20.80 108 304 1.7E-12 T 18-10-2018 SHALO_2142 49594ee67465c7f07ac941d0db6671e5 844 SUPERFAMILY SSF51445 52 296 1.75E-41 T 18-10-2018 IPR017853 Glycoside hydrolase superfamily SHALO_1955 6d1e8d224b8e62f5875e4e78f0abbca9 648 Pfam PF13193 AMP-binding enzyme C-terminal domain 531 611 8.0E-22 T 18-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain SHALO_1955 6d1e8d224b8e62f5875e4e78f0abbca9 648 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 1 646 50.155 T 18-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 SHALO_1955 6d1e8d224b8e62f5875e4e78f0abbca9 648 SUPERFAMILY SSF56801 9 642 1.57E-175 T 18-10-2018 SHALO_1955 6d1e8d224b8e62f5875e4e78f0abbca9 648 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 23 78 2.2E-18 T 18-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 SHALO_1955 6d1e8d224b8e62f5875e4e78f0abbca9 648 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 18 644 9.2E-296 T 18-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 SHALO_1955 6d1e8d224b8e62f5875e4e78f0abbca9 648 ProSitePatterns PS00455 Putative AMP-binding domain signature. 257 268 - T 18-10-2018 IPR020845 AMP-binding, conserved site SHALO_1955 6d1e8d224b8e62f5875e4e78f0abbca9 648 Gene3D G3DSA:3.40.50.12780 47 515 7.6E-110 T 18-10-2018 SHALO_1955 6d1e8d224b8e62f5875e4e78f0abbca9 648 Pfam PF00501 AMP-binding enzyme 82 522 1.5E-91 T 18-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 SHALO_1955 6d1e8d224b8e62f5875e4e78f0abbca9 648 Gene3D G3DSA:3.30.300.30 518 647 1.9E-26 T 18-10-2018 SHALO_2123 21d4695fafd1741ac6f43a78c096fc93 519 SUPERFAMILY SSF51735 288 423 5.58E-29 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_2123 21d4695fafd1741ac6f43a78c096fc93 519 PRINTS PR00169 Potassium channel signature 243 269 3.6E-21 T 18-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 SHALO_2123 21d4695fafd1741ac6f43a78c096fc93 519 PRINTS PR00169 Potassium channel signature 155 181 3.6E-21 T 18-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 SHALO_2123 21d4695fafd1741ac6f43a78c096fc93 519 PRINTS PR00169 Potassium channel signature 184 207 3.6E-21 T 18-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 SHALO_2123 21d4695fafd1741ac6f43a78c096fc93 519 PRINTS PR00169 Potassium channel signature 214 236 3.6E-21 T 18-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 SHALO_2123 21d4695fafd1741ac6f43a78c096fc93 519 PRINTS PR00169 Potassium channel signature 34 62 3.6E-21 T 18-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 SHALO_2123 21d4695fafd1741ac6f43a78c096fc93 519 PRINTS PR00169 Potassium channel signature 73 96 3.6E-21 T 18-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 SHALO_2123 21d4695fafd1741ac6f43a78c096fc93 519 Gene3D G3DSA:3.30.70.1450 442 515 2.7E-9 T 18-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 SHALO_2123 21d4695fafd1741ac6f43a78c096fc93 519 Gene3D G3DSA:3.40.50.720 288 432 7.1E-30 T 18-10-2018 SHALO_2123 21d4695fafd1741ac6f43a78c096fc93 519 SUPERFAMILY SSF116726 431 512 1.7E-8 T 18-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 SHALO_2123 21d4695fafd1741ac6f43a78c096fc93 519 Pfam PF00520 Ion transport protein 41 271 5.2E-23 T 18-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 SHALO_2123 21d4695fafd1741ac6f43a78c096fc93 519 SUPERFAMILY SSF81324 37 272 1.96E-39 T 18-10-2018 SHALO_2123 21d4695fafd1741ac6f43a78c096fc93 519 Pfam PF02254 TrkA-N domain 292 407 9.2E-26 T 18-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SHALO_2123 21d4695fafd1741ac6f43a78c096fc93 519 Gene3D G3DSA:1.10.287.70 66 274 6.4E-41 T 18-10-2018 SHALO_1648 8a5761ea5154cb8ef244900b12b3049a 414 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 136 156 - T 18-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 SHALO_1648 8a5761ea5154cb8ef244900b12b3049a 414 SUPERFAMILY SSF102114 117 354 4.19E-45 T 18-10-2018 SHALO_1648 8a5761ea5154cb8ef244900b12b3049a 414 Gene3D G3DSA:3.40.50.12160 2 124 3.5E-16 T 18-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily SHALO_1648 8a5761ea5154cb8ef244900b12b3049a 414 Gene3D G3DSA:3.80.30.20 130 357 9.1E-61 T 18-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe SHALO_1648 8a5761ea5154cb8ef244900b12b3049a 414 SMART SM00729 132 345 2.6E-41 T 18-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 SHALO_1648 8a5761ea5154cb8ef244900b12b3049a 414 Pfam PF04055 Radical SAM superfamily 137 300 3.6E-21 T 18-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 SHALO_1648 8a5761ea5154cb8ef244900b12b3049a 414 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 3 411 4.1E-103 T 18-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 SHALO_1648 8a5761ea5154cb8ef244900b12b3049a 414 TIGRFAM TIGR01579 MiaB-like-C: MiaB-like tRNA modifying enzyme 6 400 1.4E-121 T 18-10-2018 IPR006467 MiaB-like tRNA modifying enzyme GO:0016740 SHALO_1648 8a5761ea5154cb8ef244900b12b3049a 414 Pfam PF00919 Uncharacterized protein family UPF0004 3 89 1.1E-18 T 18-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 SHALO_2211 77ef5bb701c9c1749a9752a04158f46b 577 SUPERFAMILY SSF53335 105 311 5.15E-16 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_2211 77ef5bb701c9c1749a9752a04158f46b 577 Gene3D G3DSA:3.40.50.720 124 246 5.6E-22 T 18-10-2018 SHALO_2211 77ef5bb701c9c1749a9752a04158f46b 577 Pfam PF02719 Polysaccharide biosynthesis protein 265 538 1.5E-115 T 18-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain SHALO_2211 77ef5bb701c9c1749a9752a04158f46b 577 SUPERFAMILY SSF51735 263 524 1.89E-55 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_2211 77ef5bb701c9c1749a9752a04158f46b 577 Gene3D G3DSA:3.40.50.720 260 574 2.9E-114 T 18-10-2018 SHALO_0722 a5cbec99fe3f5a3f349c50abc22cf12a 441 SUPERFAMILY SSF118215 21 416 3.14E-91 T 18-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 SHALO_0722 a5cbec99fe3f5a3f349c50abc22cf12a 441 Pfam PF00375 Sodium:dicarboxylate symporter family 21 415 4.0E-83 T 18-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 SHALO_0722 a5cbec99fe3f5a3f349c50abc22cf12a 441 PRINTS PR00173 Glutamate-aspartate symporter signature 158 180 8.2E-18 T 18-10-2018 SHALO_0722 a5cbec99fe3f5a3f349c50abc22cf12a 441 PRINTS PR00173 Glutamate-aspartate symporter signature 306 332 8.2E-18 T 18-10-2018 SHALO_0722 a5cbec99fe3f5a3f349c50abc22cf12a 441 PRINTS PR00173 Glutamate-aspartate symporter signature 341 360 8.2E-18 T 18-10-2018 SHALO_0722 a5cbec99fe3f5a3f349c50abc22cf12a 441 PRINTS PR00173 Glutamate-aspartate symporter signature 86 111 8.2E-18 T 18-10-2018 SHALO_0722 a5cbec99fe3f5a3f349c50abc22cf12a 441 PRINTS PR00173 Glutamate-aspartate symporter signature 206 225 8.2E-18 T 18-10-2018 SHALO_0722 a5cbec99fe3f5a3f349c50abc22cf12a 441 PRINTS PR00173 Glutamate-aspartate symporter signature 19 39 8.2E-18 T 18-10-2018 SHALO_0722 a5cbec99fe3f5a3f349c50abc22cf12a 441 Gene3D G3DSA:1.10.3860.10 8 433 2.2E-97 T 18-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 SHALO_2097 5cbce7f1dcf4918765dfc7f588b82570 396 Gene3D G3DSA:2.40.160.10 32 396 2.9E-25 T 18-10-2018 IPR023614 Porin domain superfamily SHALO_2097 5cbce7f1dcf4918765dfc7f588b82570 396 Pfam PF03573 outer membrane porin, OprD family 83 333 1.3E-9 T 18-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 SHALO_1038 15ef226b508cf4da701fc9986dbb0002 213 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 55 161 7.3E-14 T 18-10-2018 IPR010319 Transglutaminase-like cysteine peptidase, predicted SHALO_1038 15ef226b508cf4da701fc9986dbb0002 213 Gene3D G3DSA:3.10.620.30 21 213 1.8E-67 T 18-10-2018 SHALO_1998 4d919dd6107ef355ffa7a20c7b1b237f 171 Pfam PF04390 Lipopolysaccharide-assembly 37 160 1.9E-10 T 18-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 SHALO_1369 1d30148b10aa2d32450cc5720d5eb2ea 614 PRINTS PR01005 Flagellar hook-associated protein signature 126 146 1.5E-11 T 18-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 SHALO_1369 1d30148b10aa2d32450cc5720d5eb2ea 614 PRINTS PR01005 Flagellar hook-associated protein signature 51 73 1.5E-11 T 18-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 SHALO_1369 1d30148b10aa2d32450cc5720d5eb2ea 614 PRINTS PR01005 Flagellar hook-associated protein signature 159 183 1.5E-11 T 18-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 SHALO_1369 1d30148b10aa2d32450cc5720d5eb2ea 614 PRINTS PR01005 Flagellar hook-associated protein signature 13 36 1.5E-11 T 18-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 SHALO_1369 1d30148b10aa2d32450cc5720d5eb2ea 614 SUPERFAMILY SSF64518 110 611 1.44E-10 T 18-10-2018 SHALO_1369 1d30148b10aa2d32450cc5720d5eb2ea 614 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 552 611 9.1E-15 T 18-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain SHALO_1369 1d30148b10aa2d32450cc5720d5eb2ea 614 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 5 424 8.6E-87 T 18-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 SHALO_1369 1d30148b10aa2d32450cc5720d5eb2ea 614 Pfam PF00460 Flagella basal body rod protein 7 34 8.5E-5 T 18-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 SHALO_0587 462549f3485451cfd43f1166aa7ac810 364 Gene3D G3DSA:3.30.70.1660 129 356 1.4E-93 T 18-10-2018 SHALO_0587 462549f3485451cfd43f1166aa7ac810 364 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 244 260 - T 18-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 SHALO_0587 462549f3485451cfd43f1166aa7ac810 364 Pfam PF03462 PCRF domain 31 219 4.4E-59 T 18-10-2018 IPR005139 Peptide chain release factor GO:0006415 SHALO_0587 462549f3485451cfd43f1166aa7ac810 364 Gene3D G3DSA:1.20.58.410 4 115 7.3E-19 T 18-10-2018 SHALO_0587 462549f3485451cfd43f1166aa7ac810 364 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 2 363 38.125 T 18-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 SHALO_0587 462549f3485451cfd43f1166aa7ac810 364 SMART SM00937 84 194 4.0E-59 T 18-10-2018 IPR005139 Peptide chain release factor GO:0006415 SHALO_0587 462549f3485451cfd43f1166aa7ac810 364 Gene3D G3DSA:3.30.160.20 225 318 1.4E-93 T 18-10-2018 SHALO_0587 462549f3485451cfd43f1166aa7ac810 364 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 3 362 5.0E-158 T 18-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 SHALO_0587 462549f3485451cfd43f1166aa7ac810 364 SUPERFAMILY SSF75620 29 361 5.49E-128 T 18-10-2018 SHALO_0587 462549f3485451cfd43f1166aa7ac810 364 Pfam PF00472 RF-1 domain 227 335 2.7E-40 T 18-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 SHALO_1564 bfda919367fc0376331dec9645910635 504 SUPERFAMILY SSF102114 157 355 1.7E-31 T 18-10-2018 SHALO_1564 bfda919367fc0376331dec9645910635 504 Pfam PF04055 Radical SAM superfamily 167 322 1.6E-12 T 18-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 SHALO_1564 bfda919367fc0376331dec9645910635 504 Pfam PF02310 B12 binding domain 15 122 2.8E-10 T 18-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 SHALO_1564 bfda919367fc0376331dec9645910635 504 SMART SM00729 162 371 9.2E-11 T 18-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 SHALO_1564 bfda919367fc0376331dec9645910635 504 Pfam PF13311 Protein of unknown function (DUF4080) 356 484 1.0E-17 T 18-10-2018 IPR025288 Domain of unknown function DUF4080 SHALO_1564 bfda919367fc0376331dec9645910635 504 Gene3D G3DSA:3.40.50.280 11 131 2.9E-6 T 18-10-2018 SHALO_1564 bfda919367fc0376331dec9645910635 504 Gene3D G3DSA:3.80.30.20 160 361 6.4E-20 T 18-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe SHALO_2088 2a9b2ed6cd0d01547094d7c18ef86c13 102 SUPERFAMILY SSF46785 14 98 1.82E-17 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SHALO_2088 2a9b2ed6cd0d01547094d7c18ef86c13 102 SMART SM00418 18 97 7.3E-10 T 18-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SHALO_2088 2a9b2ed6cd0d01547094d7c18ef86c13 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 53 68 1.1E-6 T 18-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SHALO_2088 2a9b2ed6cd0d01547094d7c18ef86c13 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 68 83 1.1E-6 T 18-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SHALO_2088 2a9b2ed6cd0d01547094d7c18ef86c13 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 20 35 1.1E-6 T 18-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SHALO_2088 2a9b2ed6cd0d01547094d7c18ef86c13 102 Gene3D G3DSA:1.10.10.10 4 101 5.2E-19 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_2088 2a9b2ed6cd0d01547094d7c18ef86c13 102 Pfam PF12840 Helix-turn-helix domain 18 76 3.9E-8 T 18-10-2018 SHALO_1916 371842f31f88eb414e1510754293da74 199 Pfam PF01810 LysE type translocator 13 197 3.0E-35 T 18-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 SHALO_1833 ffb3889626ba791c105e48d33d4da9c7 228 Gene3D G3DSA:3.40.190.10 24 226 5.3E-17 T 18-10-2018 SHALO_1833 ffb3889626ba791c105e48d33d4da9c7 228 Gene3D G3DSA:3.40.190.10 104 200 5.3E-17 T 18-10-2018 SHALO_1833 ffb3889626ba791c105e48d33d4da9c7 228 SUPERFAMILY SSF53850 16 226 5.83E-25 T 18-10-2018 SHALO_1833 ffb3889626ba791c105e48d33d4da9c7 228 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 21 226 2.5E-14 T 18-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SHALO_1568 699925a8ee01311fd384880a82510d7e 144 Pfam PF13380 CoA binding domain 24 139 3.1E-36 T 18-10-2018 IPR003781 CoA-binding GO:0048037 SHALO_1568 699925a8ee01311fd384880a82510d7e 144 SUPERFAMILY SSF51735 9 141 3.04E-37 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_1568 699925a8ee01311fd384880a82510d7e 144 SMART SM00881 19 113 6.5E-19 T 18-10-2018 IPR003781 CoA-binding GO:0048037 SHALO_1568 699925a8ee01311fd384880a82510d7e 144 Gene3D G3DSA:3.40.50.720 7 144 6.2E-40 T 18-10-2018 SHALO_0872 ca1a0e9bd1eefbb144415b4024400265 152 Gene3D G3DSA:3.40.630.30 4 135 4.5E-25 T 18-10-2018 SHALO_0872 ca1a0e9bd1eefbb144415b4024400265 152 SUPERFAMILY SSF55729 36 151 1.72E-18 T 18-10-2018 IPR016181 Acyl-CoA N-acyltransferase SHALO_0872 ca1a0e9bd1eefbb144415b4024400265 152 Pfam PF00583 Acetyltransferase (GNAT) family 36 117 7.0E-11 T 18-10-2018 IPR000182 GNAT domain SHALO_2345 53dcb0a2791ba179c04d8a44cffd44d8 232 Pfam PF08761 dUTPase 7 188 3.1E-35 T 18-10-2018 IPR014871 dUTPase/dCTP pyrophosphatase KEGG: 00240+3.6.1.12 SHALO_2345 53dcb0a2791ba179c04d8a44cffd44d8 232 Gene3D G3DSA:1.10.4010.10 1 232 1.1E-79 T 18-10-2018 SHALO_2345 53dcb0a2791ba179c04d8a44cffd44d8 232 SUPERFAMILY SSF101386 1 231 5.23E-69 T 18-10-2018 SHALO_0437 6f94e4f1bcdb83e876a97e7ee7cf7543 256 SUPERFAMILY SSF55909 21 251 2.75E-47 T 18-10-2018 SHALO_0437 6f94e4f1bcdb83e876a97e7ee7cf7543 256 Pfam PF02274 Amidinotransferase 22 249 1.3E-15 T 18-10-2018 SHALO_0437 6f94e4f1bcdb83e876a97e7ee7cf7543 256 Gene3D G3DSA:3.75.10.10 3 251 4.7E-63 T 18-10-2018 SHALO_2676 c99b1f3dd66e45e83d73a0b3cabb26ac 129 TIGRFAM TIGR00494 crcB: protein CrcB 6 118 2.2E-32 T 18-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 SHALO_2676 c99b1f3dd66e45e83d73a0b3cabb26ac 129 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 7 117 1.6E-21 T 18-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 SHALO_2676 c99b1f3dd66e45e83d73a0b3cabb26ac 129 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 5 122 17.709 T 18-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 SHALO_2288 f486b6f7555827d781acb78145d55764 191 SUPERFAMILY SSF51182 1 186 2.58E-74 T 18-10-2018 IPR011051 RmlC-like cupin domain superfamily SHALO_2288 f486b6f7555827d781acb78145d55764 191 Gene3D G3DSA:2.60.120.10 1 189 3.1E-72 T 18-10-2018 IPR014710 RmlC-like jelly roll fold SHALO_2288 f486b6f7555827d781acb78145d55764 191 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 178 2.0E-58 T 18-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 SHALO_2288 f486b6f7555827d781acb78145d55764 191 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 3 178 9.0E-73 T 18-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 SHALO_2288 f486b6f7555827d781acb78145d55764 191 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 7 178 8.2E-71 T 18-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 SHALO_1188 54c967a8e3b4d2e2107f329d5e6bbf8e 124 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 2 104 1.0E-26 T 18-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 SHALO_1188 54c967a8e3b4d2e2107f329d5e6bbf8e 124 PIRSF PIRSF003230 1 124 8.0E-37 T 18-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 SHALO_1188 54c967a8e3b4d2e2107f329d5e6bbf8e 124 Gene3D G3DSA:3.10.129.10 1 120 3.2E-32 T 18-10-2018 SHALO_1188 54c967a8e3b4d2e2107f329d5e6bbf8e 124 SUPERFAMILY SSF54637 2 122 1.87E-29 T 18-10-2018 IPR029069 HotDog domain superfamily SHALO_1188 54c967a8e3b4d2e2107f329d5e6bbf8e 124 Pfam PF03061 Thioesterase superfamily 13 93 7.9E-17 T 18-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 SHALO_1188 54c967a8e3b4d2e2107f329d5e6bbf8e 124 ProSitePatterns PS01328 4-hydroxybenzoyl-CoA thioesterase family active site. 4 21 - T 18-10-2018 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site GO:0016787 SHALO_2354 3b043f2487e06450b4483506e4c56ae8 139 Gene3D G3DSA:3.10.129.10 1 132 2.5E-36 T 18-10-2018 SHALO_2354 3b043f2487e06450b4483506e4c56ae8 139 Pfam PF03061 Thioesterase superfamily 22 92 9.6E-19 T 18-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 SHALO_2354 3b043f2487e06450b4483506e4c56ae8 139 SUPERFAMILY SSF54637 5 125 1.19E-31 T 18-10-2018 IPR029069 HotDog domain superfamily SHALO_2058 20293a3dd4a0a50d144df2c1063aabf8 211 Gene3D G3DSA:1.10.3480.10 2 206 2.3E-37 T 18-10-2018 SHALO_2058 20293a3dd4a0a50d144df2c1063aabf8 211 SUPERFAMILY SSF89155 6 200 1.96E-33 T 18-10-2018 IPR036411 TorD-like superfamily SHALO_2058 20293a3dd4a0a50d144df2c1063aabf8 211 Pfam PF02613 Nitrate reductase delta subunit 57 166 4.6E-23 T 18-10-2018 IPR020945 DMSO/Nitrate reductase chaperone SHALO_0530 0351122f86a4add9543b375fe6d0fe0e 421 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 63 74 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_0530 0351122f86a4add9543b375fe6d0fe0e 421 Gene3D G3DSA:1.10.1060.10 4 94 2.2E-7 T 18-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 SHALO_0530 0351122f86a4add9543b375fe6d0fe0e 421 PIRSF PIRSF000139 1 421 1.8E-119 T 18-10-2018 SHALO_0530 0351122f86a4add9543b375fe6d0fe0e 421 Pfam PF13534 4Fe-4S dicluster domain 11 78 1.4E-8 T 18-10-2018 SHALO_0530 0351122f86a4add9543b375fe6d0fe0e 421 SUPERFAMILY SSF46548 9 92 7.5E-16 T 18-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 SHALO_0530 0351122f86a4add9543b375fe6d0fe0e 421 Pfam PF02754 Cysteine-rich domain 175 260 1.4E-13 T 18-10-2018 IPR004017 Cysteine-rich domain SHALO_0530 0351122f86a4add9543b375fe6d0fe0e 421 Pfam PF02754 Cysteine-rich domain 311 394 1.4E-11 T 18-10-2018 IPR004017 Cysteine-rich domain SHALO_1271 26a70e44413ca4768238f6e5dbd6d958 211 SMART SM00448 2 113 2.8E-30 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_1271 26a70e44413ca4768238f6e5dbd6d958 211 Gene3D G3DSA:3.40.50.2300 1 118 2.9E-30 T 18-10-2018 SHALO_1271 26a70e44413ca4768238f6e5dbd6d958 211 Pfam PF00072 Response regulator receiver domain 4 113 4.3E-24 T 18-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_1271 26a70e44413ca4768238f6e5dbd6d958 211 SMART SM00862 142 208 2.2E-5 T 18-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_1271 26a70e44413ca4768238f6e5dbd6d958 211 SUPERFAMILY SSF46894 120 209 1.56E-11 T 18-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHALO_1271 26a70e44413ca4768238f6e5dbd6d958 211 SUPERFAMILY SSF52172 2 133 6.55E-32 T 18-10-2018 IPR011006 CheY-like superfamily SHALO_1271 26a70e44413ca4768238f6e5dbd6d958 211 Gene3D G3DSA:1.10.10.10 119 210 3.1E-10 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_0262 d8c4d8147f02e79d03a31497f61ef489 152 Pfam PF13613 Helix-turn-helix of DDE superfamily endonuclease 49 99 2.2E-13 T 18-10-2018 IPR027805 Transposase, Helix-turn-helix domain SHALO_1961 5ef4b7a941e573b6cee394c3f47c3fba 302 Gene3D G3DSA:3.30.70.1350 202 292 2.7E-20 T 18-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 SHALO_1961 5ef4b7a941e573b6cee394c3f47c3fba 302 Gene3D G3DSA:1.20.1510.10 3 201 5.5E-52 T 18-10-2018 IPR027469 Cation efflux transmembrane domain superfamily SHALO_1961 5ef4b7a941e573b6cee394c3f47c3fba 302 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 5 275 1.2E-66 T 18-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SHALO_1961 5ef4b7a941e573b6cee394c3f47c3fba 302 Pfam PF16916 Dimerisation domain of Zinc Transporter 206 285 2.5E-19 T 18-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain SHALO_1961 5ef4b7a941e573b6cee394c3f47c3fba 302 SUPERFAMILY SSF160240 205 287 3.14E-17 T 18-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 SHALO_1961 5ef4b7a941e573b6cee394c3f47c3fba 302 SUPERFAMILY SSF161111 4 203 5.89E-49 T 18-10-2018 IPR027469 Cation efflux transmembrane domain superfamily SHALO_1961 5ef4b7a941e573b6cee394c3f47c3fba 302 Pfam PF01545 Cation efflux family 9 202 8.3E-38 T 18-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SHALO_0638 e3303f475b2a61eb536fa183a07b8506 231 Gene3D G3DSA:3.40.50.300 1 231 5.8E-54 T 18-10-2018 SHALO_0638 e3303f475b2a61eb536fa183a07b8506 231 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 18-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_0638 e3303f475b2a61eb536fa183a07b8506 231 SUPERFAMILY SSF52540 2 223 6.48E-52 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0638 e3303f475b2a61eb536fa183a07b8506 231 SMART SM00382 26 210 2.3E-5 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_0638 e3303f475b2a61eb536fa183a07b8506 231 Pfam PF00005 ABC transporter 18 159 2.7E-26 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_2397 c92f6e724f5a91d8aae42ff219a008e0 369 PIRSF PIRSF000524 1 368 9.2E-96 T 18-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 SHALO_2397 c92f6e724f5a91d8aae42ff219a008e0 369 Gene3D G3DSA:3.90.1150.10 7 354 5.0E-88 T 18-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 SHALO_2397 c92f6e724f5a91d8aae42ff219a008e0 369 Pfam PF00266 Aminotransferase class-V 2 320 3.8E-23 T 18-10-2018 IPR000192 Aminotransferase class V domain SHALO_2397 c92f6e724f5a91d8aae42ff219a008e0 369 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 175 195 - T 18-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site SHALO_2397 c92f6e724f5a91d8aae42ff219a008e0 369 SUPERFAMILY SSF53383 2 350 1.78E-76 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase SHALO_2397 c92f6e724f5a91d8aae42ff219a008e0 369 Gene3D G3DSA:3.40.640.10 12 250 5.0E-88 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 SHALO_1221 4b7ce575e94af73b6465fca59116f384 128 SUPERFAMILY SSF88723 1 122 1.23E-13 T 18-10-2018 IPR029060 PIN-like domain superfamily SHALO_1221 4b7ce575e94af73b6465fca59116f384 128 Gene3D G3DSA:3.40.50.1010 3 126 1.2E-6 T 18-10-2018 SHALO_1221 4b7ce575e94af73b6465fca59116f384 128 Pfam PF01850 PIN domain 5 118 4.1E-8 T 18-10-2018 IPR002716 PIN domain SHALO_0900 0b95c67fe7d3f9f74f8d5c8ed05534a9 284 Pfam PF02754 Cysteine-rich domain 145 235 1.7E-15 T 18-10-2018 IPR004017 Cysteine-rich domain SHALO_0900 0b95c67fe7d3f9f74f8d5c8ed05534a9 284 Pfam PF02754 Cysteine-rich domain 6 87 1.3E-12 T 18-10-2018 IPR004017 Cysteine-rich domain SHALO_1979 fe39a57ee65dfb4830b60507615bc7d0 151 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 30 7.8E-6 T 18-10-2018 IPR012902 Prokaryotic N-terminal methylation site SHALO_1979 fe39a57ee65dfb4830b60507615bc7d0 151 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 29 5.4E-6 T 18-10-2018 IPR012902 Prokaryotic N-terminal methylation site SHALO_1979 fe39a57ee65dfb4830b60507615bc7d0 151 SUPERFAMILY SSF54523 10 137 7.85E-13 T 18-10-2018 SHALO_1979 fe39a57ee65dfb4830b60507615bc7d0 151 PRINTS PR00813 Bacterial general secretion pathway protein G signature 9 34 2.2E-9 T 18-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 SHALO_1979 fe39a57ee65dfb4830b60507615bc7d0 151 PRINTS PR00813 Bacterial general secretion pathway protein G signature 45 63 2.2E-9 T 18-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 SHALO_1979 fe39a57ee65dfb4830b60507615bc7d0 151 Gene3D G3DSA:3.30.700.10 10 149 9.2E-15 T 18-10-2018 SHALO_1078 7b9a0b7361ff0851677901814a27fb77 247 Pfam PF02754 Cysteine-rich domain 4 83 4.3E-13 T 18-10-2018 IPR004017 Cysteine-rich domain SHALO_1078 7b9a0b7361ff0851677901814a27fb77 247 Pfam PF02754 Cysteine-rich domain 128 222 2.1E-10 T 18-10-2018 IPR004017 Cysteine-rich domain SHALO_1481 b40d1e841d379e4a643e75c9a0444f3c 349 Pfam PF03573 outer membrane porin, OprD family 53 348 4.6E-13 T 18-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 SHALO_1481 b40d1e841d379e4a643e75c9a0444f3c 349 Gene3D G3DSA:2.40.160.10 36 349 2.5E-22 T 18-10-2018 IPR023614 Porin domain superfamily SHALO_2763 1f197c599ad07d34f387657ab446f2d5 357 Gene3D G3DSA:2.40.240.50 113 268 2.0E-95 T 18-10-2018 SHALO_2763 1f197c599ad07d34f387657ab446f2d5 357 SMART SM00925 114 264 1.3E-68 T 18-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 SHALO_2763 1f197c599ad07d34f387657ab446f2d5 357 SUPERFAMILY SSF50685 37 356 5.23E-103 T 18-10-2018 IPR036908 RlpA-like domain superfamily SHALO_2763 1f197c599ad07d34f387657ab446f2d5 357 Gene3D G3DSA:2.40.40.10 68 356 2.0E-95 T 18-10-2018 IPR036908 RlpA-like domain superfamily SHALO_2763 1f197c599ad07d34f387657ab446f2d5 357 Pfam PF06725 3D domain 282 353 2.1E-20 T 18-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 SHALO_2763 1f197c599ad07d34f387657ab446f2d5 357 PIRSF PIRSF019422 21 357 2.6E-101 T 18-10-2018 IPR026044 Membrane-bound lytic murein transglycosylase A SHALO_2763 1f197c599ad07d34f387657ab446f2d5 357 Pfam PF03562 MltA specific insert domain 49 264 1.9E-68 T 18-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 SHALO_1182 b7fe3aa623cdb9bf6080c9f45baa5579 400 Pfam PF00872 Transposase, Mutator family 11 373 2.7E-102 T 18-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 SHALO_1182 b7fe3aa623cdb9bf6080c9f45baa5579 400 ProSitePatterns PS01007 Transposases, Mutator family, signature. 228 252 - T 18-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 SHALO_0067 7f59a8ece6d33b1e72943825dc765484 138 Pfam PF07022 Bacteriophage CI repressor helix-turn-helix domain 7 42 1.0E-4 T 18-10-2018 IPR010744 Bacteriophage CI repressor GO:0003677|GO:0045892 SHALO_0067 7f59a8ece6d33b1e72943825dc765484 138 Gene3D G3DSA:1.10.260.40 1 58 1.2E-8 T 18-10-2018 SHALO_2314 d6a8d06553fea6aee52b23f4b3e7af7e 381 Gene3D G3DSA:3.40.50.1970 1 185 4.3E-49 T 18-10-2018 SHALO_2314 d6a8d06553fea6aee52b23f4b3e7af7e 381 Gene3D G3DSA:1.20.1090.10 186 381 3.3E-40 T 18-10-2018 SHALO_2314 d6a8d06553fea6aee52b23f4b3e7af7e 381 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 359 2.0E-91 T 18-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 SHALO_2314 d6a8d06553fea6aee52b23f4b3e7af7e 381 SUPERFAMILY SSF56796 4 379 2.22E-99 T 18-10-2018 SHALO_1134 c0360b1fe2906b821341ee84a48b330b 396 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 71 393 1.3E-104 T 18-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 SHALO_1134 c0360b1fe2906b821341ee84a48b330b 396 Pfam PF03315 Serine dehydratase beta chain 70 112 2.5E-5 T 18-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 SHALO_1134 c0360b1fe2906b821341ee84a48b330b 396 Pfam PF03315 Serine dehydratase beta chain 6 64 5.7E-15 T 18-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 SHALO_1134 c0360b1fe2906b821341ee84a48b330b 396 Gene3D G3DSA:3.30.1330.90 10 70 6.5E-17 T 18-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 SHALO_1134 c0360b1fe2906b821341ee84a48b330b 396 SUPERFAMILY SSF143548 16 114 8.37E-23 T 18-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 SHALO_1134 c0360b1fe2906b821341ee84a48b330b 396 Pfam PF03313 Serine dehydratase alpha chain 145 392 5.3E-79 T 18-10-2018 IPR005130 Serine dehydratase-like, alpha subunit SHALO_2126 0328d6bed8d2601398daa6543ee054e0 111 SUPERFAMILY SSF55159 39 110 1.15E-13 T 18-10-2018 IPR036877 SUI1 domain superfamily GO:0003743|GO:0006413 SHALO_2126 0328d6bed8d2601398daa6543ee054e0 111 PIRSF PIRSF037511 2 111 3.2E-21 T 18-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 SHALO_2126 0328d6bed8d2601398daa6543ee054e0 111 Gene3D G3DSA:3.30.780.10 39 111 1.1E-16 T 18-10-2018 SHALO_2126 0328d6bed8d2601398daa6543ee054e0 111 Pfam PF01253 Translation initiation factor SUI1 43 105 2.3E-6 T 18-10-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 SHALO_2643 836e05c0c8491ff5edd1c5e495664e41 173 Gene3D G3DSA:3.30.450.20 35 133 1.4E-10 T 18-10-2018 SHALO_0767 2a344e8d17c8f8b42a0aa4f3486f4990 208 SUPERFAMILY SSF69618 13 205 9.94E-33 T 18-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 SHALO_0767 2a344e8d17c8f8b42a0aa4f3486f4990 208 Gene3D G3DSA:3.40.50.10090 25 130 5.3E-41 T 18-10-2018 SHALO_0767 2a344e8d17c8f8b42a0aa4f3486f4990 208 Gene3D G3DSA:3.40.50.10090 131 206 5.3E-41 T 18-10-2018 SHALO_0767 2a344e8d17c8f8b42a0aa4f3486f4990 208 Pfam PF02602 Uroporphyrinogen-III synthase HemD 13 199 2.4E-24 T 18-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 SHALO_1224 f8ad0d1e025c1e5ea17e751c7505fdc4 136 SUPERFAMILY SSF54593 5 130 6.71E-28 T 18-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SHALO_1224 f8ad0d1e025c1e5ea17e751c7505fdc4 136 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 124 1.1E-13 T 18-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain SHALO_1224 f8ad0d1e025c1e5ea17e751c7505fdc4 136 Gene3D G3DSA:3.10.180.10 3 136 1.3E-50 T 18-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SHALO_0489 9248daad15ad053260beda4a45f017a6 313 SUPERFAMILY SSF103481 53 156 2.22E-13 T 18-10-2018 SHALO_0489 9248daad15ad053260beda4a45f017a6 313 SUPERFAMILY SSF103481 201 308 1.96E-13 T 18-10-2018 SHALO_0489 9248daad15ad053260beda4a45f017a6 313 Pfam PF00892 EamA-like transporter family 165 303 1.3E-18 T 18-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 SHALO_0489 9248daad15ad053260beda4a45f017a6 313 Pfam PF00892 EamA-like transporter family 21 152 1.2E-21 T 18-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 SHALO_0438 1983aa264baf6c5942556254a7efc7b2 129 SUPERFAMILY SSF54593 4 123 3.99E-21 T 18-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SHALO_0438 1983aa264baf6c5942556254a7efc7b2 129 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 122 6.2E-8 T 18-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain SHALO_0438 1983aa264baf6c5942556254a7efc7b2 129 Gene3D G3DSA:3.10.180.10 8 126 1.9E-34 T 18-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SHALO_0171 c9dd76f2d1987b1a0c79ed352fc5c9e1 104 Pfam PF00034 Cytochrome c 23 102 2.1E-5 T 18-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_0171 c9dd76f2d1987b1a0c79ed352fc5c9e1 104 Gene3D G3DSA:1.10.760.10 23 101 1.5E-15 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_0171 c9dd76f2d1987b1a0c79ed352fc5c9e1 104 SUPERFAMILY SSF46626 21 101 4.15E-13 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_0375 14a8468a9116ee3c9441fc23021d7dd7 161 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 3 138 3.0E-58 T 18-10-2018 SHALO_0375 14a8468a9116ee3c9441fc23021d7dd7 161 SUPERFAMILY SSF52304 1 149 2.22E-58 T 18-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 SHALO_0375 14a8468a9116ee3c9441fc23021d7dd7 161 PIRSF PIRSF001399 1 145 1.5E-59 T 18-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 SHALO_0375 14a8468a9116ee3c9441fc23021d7dd7 161 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 161 65.993 T 18-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 SHALO_0375 14a8468a9116ee3c9441fc23021d7dd7 161 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 2 141 1.1E-64 T 18-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 SHALO_0375 14a8468a9116ee3c9441fc23021d7dd7 161 Pfam PF01220 Dehydroquinase class II 2 137 2.0E-57 T 18-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 SHALO_0375 14a8468a9116ee3c9441fc23021d7dd7 161 Gene3D G3DSA:3.40.50.9100 1 152 1.7E-60 T 18-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 SHALO_2145 9f563d96495f8d864eeefe36f7671256 91 Gene3D G3DSA:3.10.20.30 1 78 1.6E-5 T 18-10-2018 IPR012675 Beta-grasp domain superfamily SHALO_2145 9f563d96495f8d864eeefe36f7671256 91 SUPERFAMILY SSF54285 27 78 9.45E-9 T 18-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp SHALO_2145 9f563d96495f8d864eeefe36f7671256 91 Pfam PF02597 ThiS family 24 80 1.9E-9 T 18-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 SHALO_1093 2ce2134f0fde38695f4f3df67e61e062 280 SMART SM00138 21 276 7.3E-52 T 18-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SHALO_1093 2ce2134f0fde38695f4f3df67e61e062 280 SUPERFAMILY SSF53335 91 267 8.98E-43 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_1093 2ce2134f0fde38695f4f3df67e61e062 280 Gene3D G3DSA:3.40.50.150 90 278 2.2E-48 T 18-10-2018 SHALO_1093 2ce2134f0fde38695f4f3df67e61e062 280 Pfam PF01739 CheR methyltransferase, SAM binding domain 91 266 1.9E-45 T 18-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal SHALO_1093 2ce2134f0fde38695f4f3df67e61e062 280 PRINTS PR00996 Glutamate methyltransferase family signature 47 60 7.2E-31 T 18-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SHALO_1093 2ce2134f0fde38695f4f3df67e61e062 280 PRINTS PR00996 Glutamate methyltransferase family signature 236 259 7.2E-31 T 18-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SHALO_1093 2ce2134f0fde38695f4f3df67e61e062 280 PRINTS PR00996 Glutamate methyltransferase family signature 84 96 7.2E-31 T 18-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SHALO_1093 2ce2134f0fde38695f4f3df67e61e062 280 PRINTS PR00996 Glutamate methyltransferase family signature 217 231 7.2E-31 T 18-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SHALO_1093 2ce2134f0fde38695f4f3df67e61e062 280 PRINTS PR00996 Glutamate methyltransferase family signature 149 165 7.2E-31 T 18-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SHALO_1093 2ce2134f0fde38695f4f3df67e61e062 280 PRINTS PR00996 Glutamate methyltransferase family signature 116 136 7.2E-31 T 18-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SHALO_1093 2ce2134f0fde38695f4f3df67e61e062 280 SUPERFAMILY SSF47757 24 90 5.75E-5 T 18-10-2018 SHALO_2032 7ab72627cb32b1d88d6c6598e4e78640 81 Pfam PF13083 KH domain 4 76 1.4E-18 T 18-10-2018 SHALO_3021 da360d9d20b608bdc06fb2a0283846b2 204 TIGRFAM TIGR02170 thyX: thymidylate synthase, flavin-dependent 12 198 1.4E-49 T 18-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 SHALO_3021 da360d9d20b608bdc06fb2a0283846b2 204 Pfam PF02511 Thymidylate synthase complementing protein 9 190 1.6E-46 T 18-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 SHALO_3021 da360d9d20b608bdc06fb2a0283846b2 204 Gene3D G3DSA:3.30.1360.170 1 201 1.8E-67 T 18-10-2018 SHALO_3021 da360d9d20b608bdc06fb2a0283846b2 204 SUPERFAMILY SSF69796 1 202 2.62E-49 T 18-10-2018 IPR036098 Thymidylate synthase ThyX superfamily GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 SHALO_3021 da360d9d20b608bdc06fb2a0283846b2 204 Hamap MF_01408 Flavin-dependent thymidylate synthase [thyX]. 1 203 22.645 T 18-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 SHALO_1396 7470b86cd4e52f45b445535fa5a10808 132 Gene3D G3DSA:1.10.3680.10 4 125 1.0E-11 T 18-10-2018 IPR029024 TerB-like SHALO_1396 7470b86cd4e52f45b445535fa5a10808 132 SUPERFAMILY SSF158682 6 111 1.57E-14 T 18-10-2018 IPR029024 TerB-like SHALO_0870 6f01f867271ba96661da8e55c9de27bf 154 Pfam PF03968 OstA-like protein 21 131 6.6E-20 T 18-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal SHALO_0870 6f01f867271ba96661da8e55c9de27bf 154 Gene3D G3DSA:2.60.450.10 17 147 4.6E-18 T 18-10-2018 SHALO_0870 6f01f867271ba96661da8e55c9de27bf 154 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 18 148 6.2E-22 T 18-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 SHALO_0523 6ba35ab5031f43bdb1490878f2f303bc 142 Gene3D G3DSA:1.10.1200.120 1 128 1.3E-28 T 18-10-2018 IPR036019 Gated mechanosensitive channel SHALO_0523 6ba35ab5031f43bdb1490878f2f303bc 142 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 1 120 1.2E-32 T 18-10-2018 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L SHALO_0523 6ba35ab5031f43bdb1490878f2f303bc 142 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 1 136 19.606 T 18-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 SHALO_0523 6ba35ab5031f43bdb1490878f2f303bc 142 Pfam PF10571 Uncharacterised protein family UPF0547 118 138 1.5E-8 T 18-10-2018 IPR018886 Uncharacterised domain UPF0547 SHALO_0523 6ba35ab5031f43bdb1490878f2f303bc 142 SUPERFAMILY SSF81330 10 127 2.75E-28 T 18-10-2018 IPR036019 Gated mechanosensitive channel SHALO_0523 6ba35ab5031f43bdb1490878f2f303bc 142 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 1 119 2.9E-29 T 18-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 SHALO_0523 6ba35ab5031f43bdb1490878f2f303bc 142 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 89 97 4.2E-8 T 18-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 SHALO_0523 6ba35ab5031f43bdb1490878f2f303bc 142 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 4 18 4.2E-8 T 18-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 SHALO_0523 6ba35ab5031f43bdb1490878f2f303bc 142 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 98 107 4.2E-8 T 18-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 SHALO_0929 5256c32f0f3088eae6e02d892d2cf44c 70 SUPERFAMILY SSF54862 5 66 5.28E-15 T 18-10-2018 SHALO_0929 5256c32f0f3088eae6e02d892d2cf44c 70 Gene3D G3DSA:3.30.70.20 2 69 8.0E-20 T 18-10-2018 SHALO_0929 5256c32f0f3088eae6e02d892d2cf44c 70 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_0929 5256c32f0f3088eae6e02d892d2cf44c 70 Pfam PF12838 4Fe-4S dicluster domain 9 63 1.2E-8 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_3017 6c5c24d29ce9a1163affba073e8a6b6f 560 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 275 540 5.7E-26 T 18-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G SHALO_3017 6c5c24d29ce9a1163affba073e8a6b6f 560 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 258 4.6E-36 T 18-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G SHALO_3017 6c5c24d29ce9a1163affba073e8a6b6f 560 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 477 558 1.6E-16 T 18-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain SHALO_3017 6c5c24d29ce9a1163affba073e8a6b6f 560 Pfam PF00460 Flagella basal body rod protein 5 35 2.1E-5 T 18-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 SHALO_3017 6c5c24d29ce9a1163affba073e8a6b6f 560 SUPERFAMILY SSF117143 84 520 1.31E-39 T 18-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like SHALO_0743 42b6afb441059d2a20bed795f6d7a8dd 245 Pfam PF05036 Sporulation related domain 170 242 3.2E-8 T 18-10-2018 IPR007730 Sporulation-like domain GO:0042834 SHALO_0743 42b6afb441059d2a20bed795f6d7a8dd 245 SUPERFAMILY SSF110997 169 241 1.96E-7 T 18-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 SHALO_0286 414b6b566938a1a165608fac08f6435a 314 Gene3D G3DSA:3.10.310.30 197 313 2.6E-28 T 18-10-2018 SHALO_0286 414b6b566938a1a165608fac08f6435a 314 SUPERFAMILY SSF64182 13 307 1.03E-57 T 18-10-2018 IPR038763 DHH phosphoesterase superfamily SHALO_0286 414b6b566938a1a165608fac08f6435a 314 Pfam PF02272 DHHA1 domain 225 297 4.1E-12 T 18-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 SHALO_0286 414b6b566938a1a165608fac08f6435a 314 Gene3D G3DSA:3.90.1640.10 1 196 1.2E-50 T 18-10-2018 SHALO_0286 414b6b566938a1a165608fac08f6435a 314 Pfam PF01368 DHH family 14 150 2.1E-13 T 18-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 SHALO_2579 7c306c3bf59265b2f639ccb9713aee58 194 Gene3D G3DSA:3.30.420.130 84 194 1.6E-7 T 18-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily SHALO_2579 7c306c3bf59265b2f639ccb9713aee58 194 SUPERFAMILY SSF53146 96 188 6.67E-7 T 18-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily SHALO_2579 7c306c3bf59265b2f639ccb9713aee58 194 Pfam PF02001 Protein of unknown function DUF134 3 87 2.7E-13 T 18-10-2018 IPR002852 Uncharacterised protein family UPF0251 SHALO_0449 211dd74c60724c3c64b72d3adc706ea1 278 Gene3D G3DSA:3.90.1640.20 7 277 3.3E-64 T 18-10-2018 SHALO_0449 211dd74c60724c3c64b72d3adc706ea1 278 Pfam PF14336 Domain of unknown function (DUF4392) 7 271 2.4E-64 T 18-10-2018 IPR025504 Domain of unknown function DUF4392 KEGG: 00471+4.2.1.48 SHALO_1052 2c6c518deb1df0465e6ddf533d29d482 317 Gene3D G3DSA:3.40.630.10 28 316 1.0E-59 T 18-10-2018 SHALO_1052 2c6c518deb1df0465e6ddf533d29d482 317 SUPERFAMILY SSF53187 31 309 5.95E-54 T 18-10-2018 SHALO_1052 2c6c518deb1df0465e6ddf533d29d482 317 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 32 307 2.3E-31 T 18-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 SHALO_1490 5de2a99479e181abf730689cdbef77e6 569 Pfam PF00890 FAD binding domain 81 530 5.6E-42 T 18-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_1490 5de2a99479e181abf730689cdbef77e6 569 SUPERFAMILY SSF56425 338 498 2.01E-24 T 18-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_1490 5de2a99479e181abf730689cdbef77e6 569 SUPERFAMILY SSF51905 71 557 1.75E-37 T 18-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SHALO_1025 caeb9d12797a543713642dc2b0d3a995 262 Pfam PF04471 Restriction endonuclease 9 84 3.6E-5 T 18-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 SHALO_1025 caeb9d12797a543713642dc2b0d3a995 262 SUPERFAMILY SSF52980 14 125 8.04E-7 T 18-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 SHALO_2642 2837fc3cd93115cace6e118b398e117b 260 SUPERFAMILY SSF53850 4 254 2.82E-46 T 18-10-2018 SHALO_2642 2837fc3cd93115cace6e118b398e117b 260 SMART SM00062 31 255 6.2E-40 T 18-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SHALO_2642 2837fc3cd93115cace6e118b398e117b 260 Gene3D G3DSA:3.40.190.10 23 242 7.6E-51 T 18-10-2018 SHALO_2642 2837fc3cd93115cace6e118b398e117b 260 Gene3D G3DSA:3.40.190.10 119 209 7.6E-51 T 18-10-2018 SHALO_2642 2837fc3cd93115cace6e118b398e117b 260 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 32 250 4.7E-41 T 18-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SHALO_1817 973de3049735043a81c46a047389ca01 141 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 69 2.7E-20 T 18-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 SHALO_1817 973de3049735043a81c46a047389ca01 141 Pfam PF02416 mttA/Hcf106 family 4 49 1.0E-5 T 18-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 SHALO_1817 973de3049735043a81c46a047389ca01 141 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 141 14.736 T 18-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 SHALO_1817 973de3049735043a81c46a047389ca01 141 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 4.9E-14 T 18-10-2018 SHALO_1817 973de3049735043a81c46a047389ca01 141 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 4.9E-14 T 18-10-2018 SHALO_1817 973de3049735043a81c46a047389ca01 141 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 4.9E-14 T 18-10-2018 SHALO_0914 03f6e8d1df74de6957c6043d9225312a 476 Gene3D G3DSA:2.40.160.10 50 476 1.4E-8 T 18-10-2018 IPR023614 Porin domain superfamily SHALO_0624 531854b2fef1a29fd0ff98c5cfd8059c 93 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 9 59 4.2E-9 T 18-10-2018 SHALO_0624 531854b2fef1a29fd0ff98c5cfd8059c 93 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 6 71 2.3E-12 T 18-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM SHALO_0624 531854b2fef1a29fd0ff98c5cfd8059c 93 SUPERFAMILY SSF143120 6 79 4.45E-14 T 18-10-2018 IPR036165 YefM-like superfamily SHALO_0726 2ce57e84ac1303f387ed03ae11731780 180 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 1 180 23.332 T 18-10-2018 IPR022929 Putative manganese efflux pump MntP SHALO_0726 2ce57e84ac1303f387ed03ae11731780 180 Pfam PF02659 Putative manganese efflux pump 33 178 2.6E-46 T 18-10-2018 IPR003810 Putative manganese efflux pump SHALO_2454 10ba5c060e846182d8782335b7bbcd52 348 SUPERFAMILY SSF48452 60 165 1.43E-11 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SHALO_2454 10ba5c060e846182d8782335b7bbcd52 348 Pfam PF13176 Tetratricopeptide repeat 73 95 0.004 T 18-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_2454 10ba5c060e846182d8782335b7bbcd52 348 Gene3D G3DSA:1.25.40.10 34 223 8.9E-14 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SHALO_0564 ac443a4c28158a1bd938e28e8281abb2 277 SMART SM00477 64 262 2.8E-35 T 18-10-2018 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 SHALO_0564 ac443a4c28158a1bd938e28e8281abb2 277 SUPERFAMILY SSF54060 57 271 1.24E-49 T 18-10-2018 SHALO_0564 ac443a4c28158a1bd938e28e8281abb2 277 Gene3D G3DSA:3.40.570.10 45 273 5.7E-55 T 18-10-2018 SHALO_0564 ac443a4c28158a1bd938e28e8281abb2 277 SMART SM00892 63 262 5.7E-47 T 18-10-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 SHALO_0564 ac443a4c28158a1bd938e28e8281abb2 277 Pfam PF01223 DNA/RNA non-specific endonuclease 61 261 6.3E-35 T 18-10-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 SHALO_1485 9a5e3c57ef109b461cff92e3089e70f2 217 Gene3D G3DSA:3.30.2210.10 96 212 1.3E-14 T 18-10-2018 SHALO_2494 bc0aee606ec7a193535e83176dc9a683 327 Pfam PF04245 37-kD nucleoid-associated bacterial protein 7 288 4.2E-29 T 18-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 SHALO_1017 5d613705d5d8d7f70901db1dd9308d84 741 Pfam PF00082 Subtilase family 288 530 2.1E-26 T 18-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SHALO_1017 5d613705d5d8d7f70901db1dd9308d84 741 SUPERFAMILY SSF52743 195 608 1.13E-49 T 18-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 SHALO_1017 5d613705d5d8d7f70901db1dd9308d84 741 Gene3D G3DSA:3.40.50.200 266 534 9.8E-25 T 18-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 SHALO_2525 db0a58f523e2bf78ac6f09c50b377709 417 SUPERFAMILY SSF53474 169 409 1.71E-38 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold SHALO_2525 db0a58f523e2bf78ac6f09c50b377709 417 Pfam PF11806 Domain of unknown function (DUF3327) 65 170 2.2E-15 T 18-10-2018 IPR021764 Enterochelin esterase, N-terminal GO:0005506|GO:0005737|GO:0006826|GO:0008849 SHALO_2525 db0a58f523e2bf78ac6f09c50b377709 417 Pfam PF00756 Putative esterase 188 408 4.2E-23 T 18-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 SHALO_2525 db0a58f523e2bf78ac6f09c50b377709 417 Gene3D G3DSA:2.60.40.10 32 154 5.5E-7 T 18-10-2018 IPR013783 Immunoglobulin-like fold SHALO_2525 db0a58f523e2bf78ac6f09c50b377709 417 Gene3D G3DSA:3.40.50.1820 161 415 1.2E-63 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold SHALO_2525 db0a58f523e2bf78ac6f09c50b377709 417 SUPERFAMILY SSF81296 38 166 1.82E-20 T 18-10-2018 IPR014756 Immunoglobulin E-set SHALO_2100 577c27a1cf003b5705f824c0e55b9aef 502 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 21 441 2.2E-144 T 18-10-2018 IPR002823 Protein of unknown function DUF112, transmembrane SHALO_0504 04c32e806271c618fb82b04141f2b669 165 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 16 159 1.5E-34 T 18-10-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0504 04c32e806271c618fb82b04141f2b669 165 Gene3D G3DSA:1.20.120.1200 2 161 1.5E-42 T 18-10-2018 SHALO_2637 0842336a8265a25d7d34fe99e555a545 122 Gene3D G3DSA:3.30.420.270 52 116 1.8E-5 T 18-10-2018 SHALO_2637 0842336a8265a25d7d34fe99e555a545 122 Pfam PF02472 Biopolymer transport protein ExbD/TolR 6 121 4.6E-19 T 18-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 SHALO_1842 9be0a15ffe5082a9c3af09c63b5bfb6e 443 Pfam PF02386 Cation transport protein 24 420 1.1E-52 T 18-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 SHALO_1842 9be0a15ffe5082a9c3af09c63b5bfb6e 443 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 23 415 1.1E-102 T 18-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 SHALO_0068 3a5a5340ca2a947b73328b5a1e846616 260 Pfam PF09681 N-terminal phage replisome organiser (Phage_rep_org_N) 7 122 5.5E-23 T 18-10-2018 IPR010056 Phage replisome organiser, N-terminal domain SHALO_0068 3a5a5340ca2a947b73328b5a1e846616 260 TIGRFAM TIGR01714 phage_rep_org_N: phage replisome organizer, putative, N-terminal region 7 122 2.4E-23 T 18-10-2018 IPR010056 Phage replisome organiser, N-terminal domain SHALO_0234 99734af484f2391905e882e8a63dad4d 248 Pfam PF04085 rod shape-determining protein MreC 152 245 2.6E-13 T 18-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 SHALO_0234 99734af484f2391905e882e8a63dad4d 248 Gene3D G3DSA:2.40.10.350 160 232 5.9E-10 T 18-10-2018 SHALO_2543 8bf4585bbdfe299f550b19783ec849a1 103 PIRSF PIRSF020408 2 100 6.1E-32 T 18-10-2018 IPR016772 Uncharacterised conserved protein UCP020408 SHALO_2543 8bf4585bbdfe299f550b19783ec849a1 103 Pfam PF10087 Uncharacterized protein conserved in bacteria (DUF2325) 4 92 5.1E-16 T 18-10-2018 IPR016772 Uncharacterised conserved protein UCP020408 SHALO_2816 98ae23960c2e935cb958c25618d95e82 251 SUPERFAMILY SSF55469 3 248 4.58E-48 T 18-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 SHALO_2816 98ae23960c2e935cb958c25618d95e82 251 Pfam PF00881 Nitroreductase family 10 164 4.8E-20 T 18-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 SHALO_2816 98ae23960c2e935cb958c25618d95e82 251 Gene3D G3DSA:3.40.109.10 3 251 8.3E-53 T 18-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 SHALO_2816 98ae23960c2e935cb958c25618d95e82 251 PIRSF PIRSF005426 1 249 4.3E-63 T 18-10-2018 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 SHALO_0267 e9dff097aeb2583f5f02c9ba81e05892 198 PIRSF PIRSF000239 1 197 9.5E-58 T 18-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 SHALO_0267 e9dff097aeb2583f5f02c9ba81e05892 198 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 161 191 1.3E-9 T 18-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 SHALO_0267 e9dff097aeb2583f5f02c9ba81e05892 198 SUPERFAMILY SSF52833 2 195 2.91E-64 T 18-10-2018 IPR036249 Thioredoxin-like superfamily SHALO_0267 e9dff097aeb2583f5f02c9ba81e05892 198 Pfam PF00578 AhpC/TSA family 4 137 6.4E-33 T 18-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 SHALO_0267 e9dff097aeb2583f5f02c9ba81e05892 198 Gene3D G3DSA:3.40.30.10 1 195 1.5E-70 T 18-10-2018 SHALO_0542 19f6e1dd51bd8c343ab7a67696961344 260 PIRSF PIRSF000177 1 255 1.1E-113 T 18-10-2018 IPR004224 Fumarate reductase type B, transmembrane subunit GO:0006099 SHALO_0542 19f6e1dd51bd8c343ab7a67696961344 260 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 105 217 7.0E-15 T 18-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_0542 19f6e1dd51bd8c343ab7a67696961344 260 SUPERFAMILY SSF81343 3 244 5.4E-78 T 18-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_0542 19f6e1dd51bd8c343ab7a67696961344 260 Gene3D G3DSA:1.20.1300.10 1 250 5.4E-88 T 18-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_1263 b3fbff2f97edbacb8292fb2c554d439d 158 Pfam PF13302 Acetyltransferase (GNAT) domain 5 138 1.2E-17 T 18-10-2018 IPR000182 GNAT domain SHALO_1263 b3fbff2f97edbacb8292fb2c554d439d 158 SUPERFAMILY SSF55729 2 142 5.1E-24 T 18-10-2018 IPR016181 Acyl-CoA N-acyltransferase SHALO_1263 b3fbff2f97edbacb8292fb2c554d439d 158 Gene3D G3DSA:3.40.630.30 1 154 3.1E-24 T 18-10-2018 SHALO_0628 661f9a11475a0739f3c9ab79ad50178c 84 SUPERFAMILY SSF143011 2 82 2.22E-20 T 18-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily SHALO_0628 661f9a11475a0739f3c9ab79ad50178c 84 Gene3D G3DSA:3.30.2310.20 4 84 2.9E-20 T 18-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily SHALO_0628 661f9a11475a0739f3c9ab79ad50178c 84 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 83 2.7E-8 T 18-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family SHALO_2033 421861629c2ac609e038f56c5c64e16b 76 ProSitePatterns PS00732 Ribosomal protein S16 signature. 3 12 - T 18-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_2033 421861629c2ac609e038f56c5c64e16b 76 Gene3D G3DSA:3.30.1320.10 1 76 2.0E-28 T 18-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_2033 421861629c2ac609e038f56c5c64e16b 76 SUPERFAMILY SSF54565 3 74 5.76E-27 T 18-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_2033 421861629c2ac609e038f56c5c64e16b 76 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 76 20.328 T 18-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_2033 421861629c2ac609e038f56c5c64e16b 76 Pfam PF00886 Ribosomal protein S16 9 67 2.0E-23 T 18-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_2033 421861629c2ac609e038f56c5c64e16b 76 TIGRFAM TIGR00002 S16: ribosomal protein bS16 5 73 2.9E-27 T 18-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_2949 70b129db75ad2926887df06ad2015a21 254 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 211 237 - T 18-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 SHALO_2949 70b129db75ad2926887df06ad2015a21 254 Pfam PF01148 Cytidylyltransferase family 11 251 2.2E-49 T 18-10-2018 SHALO_1926 4f5d32328315a9471e73f195871afe09 167 Gene3D G3DSA:3.10.129.10 3 143 3.4E-33 T 18-10-2018 SHALO_1926 4f5d32328315a9471e73f195871afe09 167 Pfam PF03061 Thioesterase superfamily 53 123 1.5E-10 T 18-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 SHALO_1926 4f5d32328315a9471e73f195871afe09 167 SUPERFAMILY SSF54637 10 137 1.92E-32 T 18-10-2018 IPR029069 HotDog domain superfamily SHALO_1807 8d863b9f50c042d0994117d3fa541731 208 SUPERFAMILY SSF52833 41 204 3.18E-37 T 18-10-2018 IPR036249 Thioredoxin-like superfamily SHALO_1807 8d863b9f50c042d0994117d3fa541731 208 Gene3D G3DSA:3.40.30.10 42 208 2.1E-35 T 18-10-2018 SHALO_1807 8d863b9f50c042d0994117d3fa541731 208 Pfam PF13462 Thioredoxin 46 192 6.9E-23 T 18-10-2018 IPR012336 Thioredoxin-like fold SHALO_1996 b743b19295381dc9c5c2e325cef4d9c4 384 TIGRFAM TIGR01499 folC: bifunctional protein FolC 21 379 2.7E-81 T 18-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 SHALO_1996 b743b19295381dc9c5c2e325cef4d9c4 384 Gene3D G3DSA:3.40.1190.10 2 267 3.3E-57 T 18-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 SHALO_1996 b743b19295381dc9c5c2e325cef4d9c4 384 Gene3D G3DSA:3.90.190.20 268 383 3.1E-17 T 18-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 SHALO_1996 b743b19295381dc9c5c2e325cef4d9c4 384 SUPERFAMILY SSF53623 8 261 4.88E-56 T 18-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 SHALO_1996 b743b19295381dc9c5c2e325cef4d9c4 384 SUPERFAMILY SSF53244 268 380 7.33E-18 T 18-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 SHALO_1373 58c92386031ab9ae56bd590286cc91a4 68 Pfam PF01361 Tautomerase enzyme 2 61 3.6E-23 T 18-10-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 SHALO_1373 58c92386031ab9ae56bd590286cc91a4 68 TIGRFAM TIGR00013 taut: 4-oxalocrotonate tautomerase family enzyme 1 64 4.4E-28 T 18-10-2018 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type GO:0006725|GO:0016853 SHALO_1373 58c92386031ab9ae56bd590286cc91a4 68 SUPERFAMILY SSF55331 2 64 1.41E-21 T 18-10-2018 IPR014347 Tautomerase/MIF superfamily SHALO_1373 58c92386031ab9ae56bd590286cc91a4 68 Gene3D G3DSA:3.30.429.10 2 66 2.5E-27 T 18-10-2018 IPR014347 Tautomerase/MIF superfamily SHALO_1783 3671ad5986476672f10b637430f98748 399 Pfam PF05940 NnrS protein 21 398 1.8E-59 T 18-10-2018 IPR010266 NnrS SHALO_2071 52ca2d116d1710a219b521ce1d7c0236 152 Gene3D G3DSA:3.40.630.30 2 102 5.0E-19 T 18-10-2018 SHALO_2071 52ca2d116d1710a219b521ce1d7c0236 152 Pfam PF00583 Acetyltransferase (GNAT) family 45 139 2.8E-7 T 18-10-2018 IPR000182 GNAT domain SHALO_2071 52ca2d116d1710a219b521ce1d7c0236 152 SUPERFAMILY SSF55729 5 146 7.83E-16 T 18-10-2018 IPR016181 Acyl-CoA N-acyltransferase SHALO_2732 a2454da077d3181f91c47ad87dae8070 112 Pfam PF02411 MerT mercuric transport protein 8 105 1.1E-8 T 18-10-2018 IPR003457 Mercuric transport protein MerT GO:0015097|GO:0015694|GO:0016020 SHALO_1236 2f7d186bacfbd7c11882f45c1b5d701d 91 PIRSF PIRSF003108 1 87 1.8E-23 T 18-10-2018 IPR026262 Antitoxin DinJ GO:0000986|GO:0015643|GO:0044010 SHALO_1236 2f7d186bacfbd7c11882f45c1b5d701d 91 Pfam PF04221 RelB antitoxin 5 79 3.2E-21 T 18-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ SHALO_1236 2f7d186bacfbd7c11882f45c1b5d701d 91 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 1 72 3.6E-22 T 18-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ SHALO_1236 2f7d186bacfbd7c11882f45c1b5d701d 91 Gene3D G3DSA:1.10.1220.10 4 79 2.1E-13 T 18-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 SHALO_2875 1bf23fc839df8dbfa80f56f10c356582 143 SUPERFAMILY SSF52788 1 137 7.06E-34 T 18-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily SHALO_2875 1bf23fc839df8dbfa80f56f10c356582 143 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 132 8.2E-16 T 18-10-2018 IPR023485 Phosphotyrosine protein phosphatase I SHALO_2875 1bf23fc839df8dbfa80f56f10c356582 143 SMART SM00226 2 138 3.2E-29 T 18-10-2018 IPR023485 Phosphotyrosine protein phosphatase I SHALO_2875 1bf23fc839df8dbfa80f56f10c356582 143 Gene3D G3DSA:3.40.50.2300 2 140 6.5E-41 T 18-10-2018 SHALO_2569 24c81719f24fb8544629d7ead118cb6f 518 Pfam PF00884 Sulfatase 230 504 1.2E-45 T 18-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 SHALO_2569 24c81719f24fb8544629d7ead118cb6f 518 Gene3D G3DSA:3.40.720.10 212 518 1.3E-88 T 18-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 SHALO_2569 24c81719f24fb8544629d7ead118cb6f 518 SUPERFAMILY SSF53649 227 509 1.45E-21 T 18-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 SHALO_2569 24c81719f24fb8544629d7ead118cb6f 518 Pfam PF08019 Domain of unknown function (DUF1705) 58 206 4.5E-37 T 18-10-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 SHALO_0473 649feb60b819e21b9cc3cdb6d00ffe5c 59 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 6 55 7.8E-12 T 18-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 SHALO_0473 649feb60b819e21b9cc3cdb6d00ffe5c 59 Gene3D G3DSA:1.20.5.1030 1 58 8.3E-12 T 18-10-2018 IPR038379 SecE superfamily SHALO_0473 649feb60b819e21b9cc3cdb6d00ffe5c 59 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 6 56 5.2E-11 T 18-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 SHALO_0473 649feb60b819e21b9cc3cdb6d00ffe5c 59 Hamap MF_00422 Protein translocase subunit SecE [secE]. 2 57 11.228 T 18-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 SHALO_0890 07c3295702fa65ac5885162b8e8786d0 478 Pfam PF00939 Sodium:sulfate symporter transmembrane region 10 477 1.5E-125 T 18-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 SHALO_0890 07c3295702fa65ac5885162b8e8786d0 478 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 25 472 1.2E-116 T 18-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 SHALO_0890 07c3295702fa65ac5885162b8e8786d0 478 PIRSF PIRSF002457 1 478 2.1E-134 T 18-10-2018 IPR030676 Citrate carrier CitT-related SHALO_2392 0e299f03071a4ca41d9749fa8b362baa 184 Pfam PF04368 Protein of unknown function (DUF507) 1 182 4.6E-70 T 18-10-2018 IPR007463 Protein of unknown function DUF507 SHALO_0888 a9d955c1e0266079b1c1b358c60b03af 417 Pfam PF05538 Campylobacter major outer membrane protein 1 170 3.1E-9 T 18-10-2018 IPR008439 Campylobacter major outer membrane SHALO_0888 a9d955c1e0266079b1c1b358c60b03af 417 Gene3D G3DSA:2.40.160.10 32 417 1.0E-22 T 18-10-2018 IPR023614 Porin domain superfamily SHALO_0888 a9d955c1e0266079b1c1b358c60b03af 417 SUPERFAMILY SSF56935 34 376 6.41E-5 T 18-10-2018 SHALO_0389 8034d380abb1d49ef9ef223e49e202aa 120 Pfam PF00893 Small Multidrug Resistance protein 1 110 2.0E-5 T 18-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 SHALO_0389 8034d380abb1d49ef9ef223e49e202aa 120 Gene3D G3DSA:1.10.3730.20 1 119 3.5E-5 T 18-10-2018 SHALO_0389 8034d380abb1d49ef9ef223e49e202aa 120 SUPERFAMILY SSF103481 47 119 1.44E-10 T 18-10-2018 SHALO_0729 15d650c411dfd6fe588d481cbb6c6941 167 Gene3D G3DSA:1.20.120.1490 51 156 1.7E-18 T 18-10-2018 SHALO_0729 15d650c411dfd6fe588d481cbb6c6941 167 Pfam PF07813 LTXXQ motif family protein 60 149 2.9E-9 T 18-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 SHALO_1704 0b8b7a862903b435492b249b79871980 377 SUPERFAMILY SSF53383 4 373 1.27E-87 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase SHALO_1704 0b8b7a862903b435492b249b79871980 377 PIRSF PIRSF000390 1 376 1.4E-80 T 18-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SHALO_1704 0b8b7a862903b435492b249b79871980 377 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 16 369 1.2E-88 T 18-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SHALO_1704 0b8b7a862903b435492b249b79871980 377 Gene3D G3DSA:3.90.1150.10 255 376 4.1E-33 T 18-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 SHALO_1704 0b8b7a862903b435492b249b79871980 377 Gene3D G3DSA:3.40.640.10 2 253 3.0E-66 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 SHALO_1124 79c15bdb54e1bbb4e2907e3a8e9dddfb 270 Gene3D G3DSA:1.10.3210.10 1 264 1.3E-60 T 18-10-2018 SHALO_1124 79c15bdb54e1bbb4e2907e3a8e9dddfb 270 SUPERFAMILY SSF109604 3 268 1.73E-48 T 18-10-2018 SHALO_1124 79c15bdb54e1bbb4e2907e3a8e9dddfb 270 Pfam PF08668 HDOD domain 12 212 3.2E-34 T 18-10-2018 IPR013976 Metal-dependent hydrolase HDOD SHALO_0332 bbc1269656d486bd698edef720253ecf 342 TIGRFAM TIGR00698 TIGR00698: conserved hypothetical protein 12 336 3.6E-100 T 18-10-2018 IPR004630 Uncharacterised protein family UPF0324, bacteria GO:0016021 SHALO_0332 bbc1269656d486bd698edef720253ecf 342 Pfam PF03601 Conserved hypothetical protein 698 13 321 2.1E-100 T 18-10-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 SHALO_2794 431b11326f0c373562c78dafb71ab5af 210 SUPERFAMILY SSF54862 63 185 4.81E-20 T 18-10-2018 SHALO_2794 431b11326f0c373562c78dafb71ab5af 210 Pfam PF12838 4Fe-4S dicluster domain 64 118 4.0E-8 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_2794 431b11326f0c373562c78dafb71ab5af 210 Pfam PF12838 4Fe-4S dicluster domain 145 185 1.2E-7 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_2794 431b11326f0c373562c78dafb71ab5af 210 Gene3D G3DSA:3.30.70.20 133 190 7.6E-12 T 18-10-2018 SHALO_2794 431b11326f0c373562c78dafb71ab5af 210 Gene3D G3DSA:3.30.70.3270 47 129 1.8E-10 T 18-10-2018 SHALO_2794 431b11326f0c373562c78dafb71ab5af 210 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 173 184 - T 18-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_0485 448a791a11a08f8edea714fa7a94f4f0 226 Gene3D G3DSA:1.10.3720.10 12 225 5.8E-47 T 18-10-2018 IPR035906 MetI-like superfamily SHALO_0485 448a791a11a08f8edea714fa7a94f4f0 226 SUPERFAMILY SSF161098 17 210 1.01E-45 T 18-10-2018 IPR035906 MetI-like superfamily SHALO_0485 448a791a11a08f8edea714fa7a94f4f0 226 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 40 224 6.9E-23 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 SHALO_3020 7873b9dab902918542ca94b5aadc706a 89 Pfam PF10387 Protein of unknown function (DUF2442) 5 78 7.4E-13 T 18-10-2018 IPR018841 Protein of unknown function DUF2442 SHALO_3020 7873b9dab902918542ca94b5aadc706a 89 SUPERFAMILY SSF143880 1 79 1.31E-12 T 18-10-2018 IPR036782 NE0471-like, N-terminal SHALO_0861 d35c49c30d005411c3a5df3ad2c5a842 517 Pfam PF02463 RecF/RecN/SMC N terminal domain 6 472 1.9E-12 T 18-10-2018 IPR003395 RecF/RecN/SMC, N-terminal SHALO_0861 d35c49c30d005411c3a5df3ad2c5a842 517 SMART SM00382 25 486 0.0014 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_0861 d35c49c30d005411c3a5df3ad2c5a842 517 Gene3D G3DSA:3.40.50.300 241 480 3.8E-24 T 18-10-2018 SHALO_0861 d35c49c30d005411c3a5df3ad2c5a842 517 Gene3D G3DSA:3.40.50.300 5 240 1.1E-19 T 18-10-2018 SHALO_0861 d35c49c30d005411c3a5df3ad2c5a842 517 SUPERFAMILY SSF52540 6 472 2.55E-35 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0861 d35c49c30d005411c3a5df3ad2c5a842 517 PIRSF PIRSF003128 5 517 7.3E-102 T 18-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 SHALO_1938 1738da20acd91e10f250c774506ea802 636 ProSitePatterns PS00455 Putative AMP-binding domain signature. 237 248 - T 18-10-2018 IPR020845 AMP-binding, conserved site SHALO_1938 1738da20acd91e10f250c774506ea802 636 Gene3D G3DSA:3.30.300.30 498 627 8.9E-25 T 18-10-2018 SHALO_1938 1738da20acd91e10f250c774506ea802 636 SUPERFAMILY SSF56801 5 617 3.66E-160 T 18-10-2018 SHALO_1938 1738da20acd91e10f250c774506ea802 636 Pfam PF00501 AMP-binding enzyme 67 501 3.8E-86 T 18-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 SHALO_1938 1738da20acd91e10f250c774506ea802 636 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 5 58 4.1E-19 T 18-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 SHALO_1938 1738da20acd91e10f250c774506ea802 636 Gene3D G3DSA:3.40.50.12780 28 494 1.2E-107 T 18-10-2018 SHALO_1938 1738da20acd91e10f250c774506ea802 636 Pfam PF13193 AMP-binding enzyme C-terminal domain 510 589 3.9E-23 T 18-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain SHALO_1915 ba187f010c946aa4c91539ed77c287f1 182 Pfam PF01794 Ferric reductase like transmembrane component 35 142 1.1E-12 T 18-10-2018 IPR013130 Ferric reductase transmembrane component-like domain SHALO_1350 e6ba7805ddbe8692e1d0e209f63576c2 315 Pfam PF04463 Protein of unknown function (DUF523) 4 143 3.3E-32 T 18-10-2018 IPR007553 Domain of unknown function DUF523 SHALO_1350 e6ba7805ddbe8692e1d0e209f63576c2 315 Pfam PF08349 Protein of unknown function (DUF1722) 186 302 7.2E-33 T 18-10-2018 IPR013560 Domain of unknown function DUF1722 SHALO_1763 f98452b01c2761156ce1187e3f441a03 81 ProDom PD010362 PHOSPHORIBOSYLFORMYLGLYCINAMIDINE PURS SYNTHETASE SYNTHASE COMPONENT SYNTHASE LIGASE FGAM UPF0062 I 9 77 3.0E-23 T 18-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 SHALO_1763 f98452b01c2761156ce1187e3f441a03 81 Gene3D G3DSA:3.30.1280.10 1 80 2.0E-30 T 18-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 SHALO_1763 f98452b01c2761156ce1187e3f441a03 81 Pfam PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase 2 77 1.1E-31 T 18-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 SHALO_1763 f98452b01c2761156ce1187e3f441a03 81 SUPERFAMILY SSF82697 1 77 5.76E-29 T 18-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 SHALO_1763 f98452b01c2761156ce1187e3f441a03 81 Hamap MF_01926 Phosphoribosylformylglycinamidine synthase subunit PurS [purS]. 1 78 20.955 T 18-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 SHALO_1763 f98452b01c2761156ce1187e3f441a03 81 TIGRFAM TIGR00302 TIGR00302: phosphoribosylformylglycinamidine synthase, purS protein 1 78 7.8E-30 T 18-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 SHALO_2394 f0624de7edda2ed8d13ffa360a3af6c9 144 Pfam PF02050 Flagellar FliJ protein 17 134 3.1E-13 T 18-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 SHALO_1077 96749d10c6907f34ed35bffbe9b790c6 208 PIRSF PIRSF006324 1 208 8.8E-56 T 18-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 SHALO_1077 96749d10c6907f34ed35bffbe9b790c6 208 Pfam PF01810 LysE type translocator 17 205 1.1E-40 T 18-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 SHALO_2340 364f1d1b6a461ae42c17cb7819766308 294 SMART SM00342 208 289 4.1E-16 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_2340 364f1d1b6a461ae42c17cb7819766308 294 Gene3D G3DSA:1.10.10.60 184 293 7.9E-20 T 18-10-2018 SHALO_2340 364f1d1b6a461ae42c17cb7819766308 294 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 258 273 7.5E-5 T 18-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SHALO_2340 364f1d1b6a461ae42c17cb7819766308 294 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 273 289 7.5E-5 T 18-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SHALO_2340 364f1d1b6a461ae42c17cb7819766308 294 Pfam PF12833 Helix-turn-helix domain 213 290 3.6E-17 T 18-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_2340 364f1d1b6a461ae42c17cb7819766308 294 SUPERFAMILY SSF46689 244 291 2.02E-11 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SHALO_1952 962e8ec8b478002a1573594f1107dffe 205 Gene3D G3DSA:3.30.70.100 99 205 1.4E-13 T 18-10-2018 SHALO_1952 962e8ec8b478002a1573594f1107dffe 205 SUPERFAMILY SSF54909 106 204 4.56E-14 T 18-10-2018 IPR011008 Dimeric alpha-beta barrel SHALO_1952 962e8ec8b478002a1573594f1107dffe 205 SUPERFAMILY SSF54909 1 99 3.49E-9 T 18-10-2018 IPR011008 Dimeric alpha-beta barrel SHALO_1952 962e8ec8b478002a1573594f1107dffe 205 Pfam PF07978 NIPSNAP 109 203 5.4E-10 T 18-10-2018 IPR012577 NIPSNAP SHALO_1531 f3d6838255a4dc2e5f35d715aa217357 66 Pfam PF14375 Cysteine-rich CWC 9 56 1.8E-12 T 18-10-2018 IPR032720 Cysteine-rich CWC SHALO_0387 aa308346c542268946c5409762bf6316 229 Pfam PF08889 WbqC-like protein family 8 222 5.7E-77 T 18-10-2018 IPR014985 WbqC-like protein family SHALO_1532 08d63ad12874c130f6e88a41d3bde2ff 201 Pfam PF13241 Putative NAD(P)-binding 7 115 6.0E-25 T 18-10-2018 SHALO_1532 08d63ad12874c130f6e88a41d3bde2ff 201 Gene3D G3DSA:3.40.50.720 1 112 3.5E-27 T 18-10-2018 SHALO_1532 08d63ad12874c130f6e88a41d3bde2ff 201 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 153 2.7E-33 T 18-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 SHALO_1532 08d63ad12874c130f6e88a41d3bde2ff 201 Gene3D G3DSA:3.30.160.110 113 148 4.4E-9 T 18-10-2018 SHALO_1532 08d63ad12874c130f6e88a41d3bde2ff 201 SUPERFAMILY SSF75615 108 184 1.07E-12 T 18-10-2018 SHALO_1532 08d63ad12874c130f6e88a41d3bde2ff 201 SUPERFAMILY SSF51735 1 113 6.97E-21 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_0966 b07948a4c010cd188b1bc50086767fd7 758 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 58 112 6.3E-8 T 18-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0966 b07948a4c010cd188b1bc50086767fd7 758 SUPERFAMILY SSF53706 59 639 4.97E-145 T 18-10-2018 SHALO_0966 b07948a4c010cd188b1bc50086767fd7 758 Gene3D G3DSA:3.40.50.740 126 550 3.4E-125 T 18-10-2018 SHALO_0966 b07948a4c010cd188b1bc50086767fd7 758 Gene3D G3DSA:3.40.228.10 193 617 3.4E-125 T 18-10-2018 SHALO_0966 b07948a4c010cd188b1bc50086767fd7 758 Pfam PF00384 Molybdopterin oxidoreductase 115 545 2.8E-64 T 18-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0966 b07948a4c010cd188b1bc50086767fd7 758 Gene3D G3DSA:2.40.40.20 623 758 8.3E-29 T 18-10-2018 SHALO_0966 b07948a4c010cd188b1bc50086767fd7 758 Pfam PF01568 Molydopterin dinucleotide binding domain 639 735 1.7E-23 T 18-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 SHALO_0966 b07948a4c010cd188b1bc50086767fd7 758 SUPERFAMILY SSF50692 635 758 2.49E-30 T 18-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily SHALO_0966 b07948a4c010cd188b1bc50086767fd7 758 Gene3D G3DSA:3.30.2070.10 504 591 3.4E-125 T 18-10-2018 SHALO_0966 b07948a4c010cd188b1bc50086767fd7 758 SMART SM00926 57 112 9.5E-11 T 18-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0966 b07948a4c010cd188b1bc50086767fd7 758 Gene3D G3DSA:2.20.25.90 53 117 1.3E-8 T 18-10-2018 SHALO_2743 79cb33d9d575a6f0410864c6b24391a0 257 SUPERFAMILY SSF161098 56 242 1.3E-28 T 18-10-2018 IPR035906 MetI-like superfamily SHALO_2743 79cb33d9d575a6f0410864c6b24391a0 257 Gene3D G3DSA:1.10.3720.10 51 246 1.7E-19 T 18-10-2018 IPR035906 MetI-like superfamily SHALO_2743 79cb33d9d575a6f0410864c6b24391a0 257 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 78 239 4.3E-16 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 SHALO_0439 2dc23a1e95f8c080c7bbf44d988e190d 192 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 4 186 3.6E-57 T 18-10-2018 IPR006286 Deglycase PfpI SHALO_0439 2dc23a1e95f8c080c7bbf44d988e190d 192 Gene3D G3DSA:3.40.50.880 1 192 9.4E-53 T 18-10-2018 IPR029062 Class I glutamine amidotransferase-like SHALO_0439 2dc23a1e95f8c080c7bbf44d988e190d 192 SUPERFAMILY SSF52317 3 187 8.89E-50 T 18-10-2018 IPR029062 Class I glutamine amidotransferase-like SHALO_0439 2dc23a1e95f8c080c7bbf44d988e190d 192 Pfam PF01965 DJ-1/PfpI family 3 183 3.2E-52 T 18-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 SHALO_0092 27d21798cf23d134280b0285a0e69e73 251 SUPERFAMILY SSF56317 3 239 1.22E-33 T 18-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily SHALO_0092 27d21798cf23d134280b0285a0e69e73 251 Gene3D G3DSA:3.60.110.10 6 245 5.9E-38 T 18-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily SHALO_0092 27d21798cf23d134280b0285a0e69e73 251 Pfam PF00795 Carbon-nitrogen hydrolase 40 235 4.7E-14 T 18-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 SHALO_0461 40551bff042f192ba6d7480a91434952 316 Pfam PF02653 Branched-chain amino acid transport system / permease component 32 292 2.7E-39 T 18-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 SHALO_2540 bf3748ca3670188a15d5d36bcd406b07 525 Gene3D G3DSA:3.30.70.270 356 525 4.9E-47 T 18-10-2018 SHALO_2540 bf3748ca3670188a15d5d36bcd406b07 525 SUPERFAMILY SSF55073 374 523 5.89E-38 T 18-10-2018 IPR029787 Nucleotide cyclase SHALO_2540 bf3748ca3670188a15d5d36bcd406b07 525 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 365 524 4.5E-42 T 18-10-2018 IPR000160 GGDEF domain SHALO_2540 bf3748ca3670188a15d5d36bcd406b07 525 Pfam PF00990 Diguanylate cyclase, GGDEF domain 369 521 6.0E-38 T 18-10-2018 IPR000160 GGDEF domain SHALO_2540 bf3748ca3670188a15d5d36bcd406b07 525 SMART SM00267 358 525 4.6E-47 T 18-10-2018 IPR000160 GGDEF domain SHALO_2540 bf3748ca3670188a15d5d36bcd406b07 525 Gene3D G3DSA:3.30.450.20 256 348 7.4E-6 T 18-10-2018 SHALO_0181 2ebc39b13f99af2a275b4a483b127099 577 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 359 491 1.4E-28 T 18-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 SHALO_0181 2ebc39b13f99af2a275b4a483b127099 577 SMART SM00382 355 494 1.1E-13 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_0181 2ebc39b13f99af2a275b4a483b127099 577 SUPERFAMILY SSF52540 311 564 7.13E-39 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0181 2ebc39b13f99af2a275b4a483b127099 577 Gene3D G3DSA:3.40.50.300 288 512 1.4E-41 T 18-10-2018 SHALO_2909 e7af0e0f41542b51986560b40b3cefc2 232 TIGRFAM TIGR03584 PseF: pseudaminic acid cytidylyltransferase 3 223 5.6E-108 T 18-10-2018 IPR020039 Pseudaminic acid cytidylyltransferase KEGG: 00520+2.7.7.81|MetaCyc: PWY-6143 SHALO_2909 e7af0e0f41542b51986560b40b3cefc2 232 Gene3D G3DSA:3.90.550.10 2 224 5.4E-67 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_2909 e7af0e0f41542b51986560b40b3cefc2 232 SUPERFAMILY SSF53448 3 225 4.22E-59 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_2909 e7af0e0f41542b51986560b40b3cefc2 232 Pfam PF02348 Cytidylyltransferase 3 202 1.1E-38 T 18-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 SHALO_1113 b4efbf18e767cb7fefb9f10eb81635a4 297 SUPERFAMILY SSF54523 8 108 1.41E-6 T 18-10-2018 SHALO_1113 b4efbf18e767cb7fefb9f10eb81635a4 297 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 27 1.3E-6 T 18-10-2018 IPR012902 Prokaryotic N-terminal methylation site SHALO_1113 b4efbf18e767cb7fefb9f10eb81635a4 297 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 26 7.7E-5 T 18-10-2018 IPR012902 Prokaryotic N-terminal methylation site SHALO_0740 8577ba6469214807b97ab4c41e9d2989 546 Gene3D G3DSA:3.40.50.12780 7 440 1.5E-105 T 18-10-2018 SHALO_0740 8577ba6469214807b97ab4c41e9d2989 546 SUPERFAMILY SSF56801 15 545 3.92E-123 T 18-10-2018 SHALO_0740 8577ba6469214807b97ab4c41e9d2989 546 Gene3D G3DSA:3.30.300.310 441 546 2.0E-28 T 18-10-2018 SHALO_0740 8577ba6469214807b97ab4c41e9d2989 546 Pfam PF00501 AMP-binding enzyme 31 445 1.1E-89 T 18-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 SHALO_0740 8577ba6469214807b97ab4c41e9d2989 546 Pfam PF13193 AMP-binding enzyme C-terminal domain 454 534 5.3E-14 T 18-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain SHALO_2280 f009454bd95af552eff464a23f433da8 397 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 2 395 2.3E-99 T 18-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 SHALO_2280 f009454bd95af552eff464a23f433da8 397 Gene3D G3DSA:3.40.1190.10 80 260 7.8E-29 T 18-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 SHALO_2280 f009454bd95af552eff464a23f433da8 397 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 89 112 - T 18-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 SHALO_2280 f009454bd95af552eff464a23f433da8 397 SUPERFAMILY SSF53623 87 215 4.19E-28 T 18-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 SHALO_2280 f009454bd95af552eff464a23f433da8 397 SUPERFAMILY SSF53244 262 395 1.6E-30 T 18-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 SHALO_2280 f009454bd95af552eff464a23f433da8 397 Pfam PF08245 Mur ligase middle domain 91 196 2.9E-16 T 18-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 SHALO_2280 f009454bd95af552eff464a23f433da8 397 Gene3D G3DSA:3.90.190.20 263 395 2.1E-33 T 18-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 SHALO_3003 725a73fd578b1e82a4d086840f6aba52 738 Pfam PF05226 CHASE2 domain 22 354 1.5E-64 T 18-10-2018 IPR007890 CHASE2 SHALO_3003 725a73fd578b1e82a4d086840f6aba52 738 SMART SM01080 29 357 2.1E-82 T 18-10-2018 IPR007890 CHASE2 SHALO_3003 725a73fd578b1e82a4d086840f6aba52 738 Gene3D G3DSA:3.30.70.1230 446 663 7.5E-60 T 18-10-2018 IPR029787 Nucleotide cyclase SHALO_3003 725a73fd578b1e82a4d086840f6aba52 738 SUPERFAMILY SSF55073 450 651 4.24E-52 T 18-10-2018 IPR029787 Nucleotide cyclase SHALO_3003 725a73fd578b1e82a4d086840f6aba52 738 SMART SM00044 417 632 9.3E-7 T 18-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 SHALO_3003 725a73fd578b1e82a4d086840f6aba52 738 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 455 648 4.3E-29 T 18-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 SHALO_3006 6c3eb3f1ad431a9af56134c63978d7a2 318 SUPERFAMILY SSF88713 31 214 1.21E-34 T 18-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 SHALO_3006 6c3eb3f1ad431a9af56134c63978d7a2 318 Gene3D G3DSA:3.20.20.370 16 230 4.4E-51 T 18-10-2018 SHALO_3006 6c3eb3f1ad431a9af56134c63978d7a2 318 Pfam PF01522 Polysaccharide deacetylase 72 195 4.8E-21 T 18-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 SHALO_2723 943efb567e0a85e6a28e00c88b6ebf34 214 Pfam PF13723 Beta-ketoacyl synthase, N-terminal domain 30 183 6.1E-20 T 18-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal SHALO_2800 9b4a51b36a62b142e3c5268d4e6f399f 219 Pfam PF13276 HTH-like domain 144 196 6.6E-11 T 18-10-2018 IPR025948 HTH-like domain SHALO_2800 9b4a51b36a62b142e3c5268d4e6f399f 219 SUPERFAMILY SSF46689 4 81 3.94E-10 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SHALO_2800 9b4a51b36a62b142e3c5268d4e6f399f 219 Pfam PF01527 Transposase 3 76 1.4E-7 T 18-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SHALO_1383 c2703424a55bfadd53e4718c99bcfcb3 243 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 10 92 1.1E-34 T 18-10-2018 IPR010627 Peptidase A24A, N-terminal SHALO_1383 c2703424a55bfadd53e4718c99bcfcb3 243 Pfam PF01478 Type IV leader peptidase family 105 204 2.9E-11 T 18-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 SHALO_1613 8b86e38b17a20f093a1134070c7b669e 237 Gene3D G3DSA:2.160.10.10 72 199 6.8E-35 T 18-10-2018 SHALO_1613 8b86e38b17a20f093a1134070c7b669e 237 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 77 113 1.2E-5 T 18-10-2018 IPR001451 Hexapeptide repeat SHALO_1613 8b86e38b17a20f093a1134070c7b669e 237 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 123 156 3.5E-9 T 18-10-2018 IPR001451 Hexapeptide repeat SHALO_1613 8b86e38b17a20f093a1134070c7b669e 237 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 10 172 4.0E-66 T 18-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 SHALO_1613 8b86e38b17a20f093a1134070c7b669e 237 SUPERFAMILY SSF51161 6 181 5.68E-51 T 18-10-2018 IPR011004 Trimeric LpxA-like superfamily SHALO_1613 8b86e38b17a20f093a1134070c7b669e 237 Gene3D G3DSA:1.10.3130.10 2 70 1.6E-15 T 18-10-2018 SHALO_1459 d1618ba4f70bc5206629478f14554ce1 600 SMART SM00382 353 474 7.4E-4 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_1459 d1618ba4f70bc5206629478f14554ce1 600 SUPERFAMILY SSF160246 93 186 6.54E-16 T 18-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily SHALO_1459 d1618ba4f70bc5206629478f14554ce1 600 Gene3D G3DSA:3.30.450.90 193 325 9.0E-43 T 18-10-2018 SHALO_1459 d1618ba4f70bc5206629478f14554ce1 600 Pfam PF00437 Type II/IV secretion system protein 233 492 9.3E-83 T 18-10-2018 IPR001482 Type II/IV secretion system protein SHALO_1459 d1618ba4f70bc5206629478f14554ce1 600 Gene3D G3DSA:3.40.50.300 326 600 5.0E-109 T 18-10-2018 SHALO_1459 d1618ba4f70bc5206629478f14554ce1 600 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 93 190 4.7E-23 T 18-10-2018 IPR007831 General secretory system II, protein E, N-terminal SHALO_1459 d1618ba4f70bc5206629478f14554ce1 600 SUPERFAMILY SSF52540 217 597 6.7E-98 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_1459 d1618ba4f70bc5206629478f14554ce1 600 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 420 434 - T 18-10-2018 IPR001482 Type II/IV secretion system protein SHALO_1459 d1618ba4f70bc5206629478f14554ce1 600 SUPERFAMILY SSF160246 22 93 5.49E-5 T 18-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily SHALO_0142 ffe42441e0420b451d6593baa68931ad 395 SUPERFAMILY SSF47384 177 246 4.9E-9 T 18-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SHALO_0142 ffe42441e0420b451d6593baa68931ad 395 SUPERFAMILY SSF55874 251 394 4.45E-27 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_0142 ffe42441e0420b451d6593baa68931ad 395 Pfam PF00512 His Kinase A (phospho-acceptor) domain 188 244 2.2E-7 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_0142 ffe42441e0420b451d6593baa68931ad 395 Gene3D G3DSA:3.30.565.10 246 395 1.0E-26 T 18-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SHALO_0142 ffe42441e0420b451d6593baa68931ad 395 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 296 393 2.1E-15 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_0142 ffe42441e0420b451d6593baa68931ad 395 SMART SM00388 187 252 1.0E-4 T 18-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_0142 ffe42441e0420b451d6593baa68931ad 395 SMART SM00387 295 395 2.8E-17 T 18-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SHALO_0142 ffe42441e0420b451d6593baa68931ad 395 Gene3D G3DSA:1.10.287.130 179 245 2.3E-7 T 18-10-2018 SHALO_2151 93d9f79cc35783101f43032ed085c891 376 SUPERFAMILY SSF52540 101 351 8.54E-58 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_2151 93d9f79cc35783101f43032ed085c891 376 SUPERFAMILY SSF117916 1 92 2.84E-13 T 18-10-2018 IPR034904 Fe-S cluster assembly domain superfamily SHALO_2151 93d9f79cc35783101f43032ed085c891 376 Gene3D G3DSA:3.40.50.300 84 339 1.2E-79 T 18-10-2018 SHALO_2151 93d9f79cc35783101f43032ed085c891 376 Hamap MF_02040 Iron-sulfur cluster carrier protein. 92 341 35.586 T 18-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein SHALO_2151 93d9f79cc35783101f43032ed085c891 376 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 98 340 1.2E-94 T 18-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 SHALO_2151 93d9f79cc35783101f43032ed085c891 376 Pfam PF01883 Iron-sulfur cluster assembly protein 4 70 1.8E-9 T 18-10-2018 IPR002744 MIP18 family-like SHALO_1460 987e2a3460bd56e4b1ada3dd4dd7ff0f 291 SUPERFAMILY SSF48452 207 274 5.69E-6 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SHALO_0460 d7959968ef56a0a84b27986d0634b7f2 300 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 284 8.0E-42 T 18-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 SHALO_2843 2bfb74ba1a7cacfbe629bb6c66ab3c9a 164 Pfam PF07731 Multicopper oxidase 62 163 5.4E-5 T 18-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 SHALO_2843 2bfb74ba1a7cacfbe629bb6c66ab3c9a 164 Gene3D G3DSA:2.60.40.420 39 164 1.6E-23 T 18-10-2018 IPR008972 Cupredoxin SHALO_2843 2bfb74ba1a7cacfbe629bb6c66ab3c9a 164 SUPERFAMILY SSF49503 53 164 7.86E-25 T 18-10-2018 IPR008972 Cupredoxin SHALO_0545 22e80d5504261a4243046323b53f9e26 790 Pfam PF00350 Dynamin family 197 394 6.9E-29 T 18-10-2018 IPR022812 Dynamin superfamily SHALO_0545 22e80d5504261a4243046323b53f9e26 790 SUPERFAMILY SSF52540 176 417 9.14E-30 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0720 6d4ff99253256fea82de79af478620a6 249 Pfam PF01925 Sulfite exporter TauE/SafE 6 236 7.1E-45 T 18-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 SHALO_2037 02ceea2229eae1a4b7dd144c412948ff 240 Pfam PF02591 C4-type zinc ribbon domain 198 230 2.7E-11 T 18-10-2018 IPR003743 C4-type zinc ribbon domain SHALO_1483 7d291a9d35e10a6e7c9adb0e78783021 153 Pfam PF13613 Helix-turn-helix of DDE superfamily endonuclease 50 100 2.3E-13 T 18-10-2018 IPR027805 Transposase, Helix-turn-helix domain SHALO_0316 e810c720dd28f11e111078e7d9a0050f 282 SUPERFAMILY SSF103190 51 183 1.06E-5 T 18-10-2018 IPR029151 Periplasmic sensor-like domain superfamily SHALO_0316 e810c720dd28f11e111078e7d9a0050f 282 Pfam PF14827 Double sensory domain of two-component sensor kinase 36 269 3.7E-22 T 18-10-2018 IPR029150 Double Cache domain 3 SHALO_1914 e4541da47c8aa5841bd026899c184660 305 SUPERFAMILY SSF56524 55 301 5.49E-76 T 18-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 SHALO_1914 e4541da47c8aa5841bd026899c184660 305 Pfam PF00174 Oxidoreductase molybdopterin binding domain 83 243 4.5E-25 T 18-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 SHALO_1914 e4541da47c8aa5841bd026899c184660 305 Gene3D G3DSA:3.90.420.10 46 305 6.3E-89 T 18-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 SHALO_2946 9b259350dfed6b30466ff4b0d0ef3bb7 443 PRINTS PR00175 Sodium/alanine symporter signature 209 228 1.5E-56 T 18-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SHALO_2946 9b259350dfed6b30466ff4b0d0ef3bb7 443 PRINTS PR00175 Sodium/alanine symporter signature 348 370 1.5E-56 T 18-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SHALO_2946 9b259350dfed6b30466ff4b0d0ef3bb7 443 PRINTS PR00175 Sodium/alanine symporter signature 304 322 1.5E-56 T 18-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SHALO_2946 9b259350dfed6b30466ff4b0d0ef3bb7 443 PRINTS PR00175 Sodium/alanine symporter signature 181 199 1.5E-56 T 18-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SHALO_2946 9b259350dfed6b30466ff4b0d0ef3bb7 443 PRINTS PR00175 Sodium/alanine symporter signature 90 112 1.5E-56 T 18-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SHALO_2946 9b259350dfed6b30466ff4b0d0ef3bb7 443 PRINTS PR00175 Sodium/alanine symporter signature 407 427 1.5E-56 T 18-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SHALO_2946 9b259350dfed6b30466ff4b0d0ef3bb7 443 Pfam PF01235 Sodium:alanine symporter family 51 442 7.8E-144 T 18-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SHALO_2946 9b259350dfed6b30466ff4b0d0ef3bb7 443 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 438 2.9E-162 T 18-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SHALO_0629 48c8d5781ec8fb1d05680061b4ea1829 82 SUPERFAMILY SSF143120 1 76 3.4E-18 T 18-10-2018 IPR036165 YefM-like superfamily SHALO_0629 48c8d5781ec8fb1d05680061b4ea1829 82 Gene3D G3DSA:3.40.1620.40 3 68 2.5E-22 T 18-10-2018 SHALO_0629 48c8d5781ec8fb1d05680061b4ea1829 82 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 72 4.8E-17 T 18-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM SHALO_0629 48c8d5781ec8fb1d05680061b4ea1829 82 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 6 55 2.9E-7 T 18-10-2018 SHALO_2242 505a8f025110971312afc06524710601 409 Pfam PF04932 O-Antigen ligase 184 330 9.1E-17 T 18-10-2018 IPR007016 O-antigen ligase-related SHALO_1122 a28235dcd61d6553476f121e0f3ac190 328 SUPERFAMILY SSF52540 14 199 2.44E-9 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_1122 a28235dcd61d6553476f121e0f3ac190 328 Pfam PF06144 DNA polymerase III, delta subunit 21 182 1.9E-8 T 18-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 SHALO_2305 215d4c1c65e621adb4779fcd7c712073 494 Pfam PF01384 Phosphate transporter family 33 481 5.7E-76 T 18-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 SHALO_0156 ca76c45eed8032f219ff7c1a449d1e2a 377 Gene3D G3DSA:3.40.50.2300 27 337 3.8E-85 T 18-10-2018 SHALO_0156 ca76c45eed8032f219ff7c1a449d1e2a 377 Gene3D G3DSA:3.40.50.2300 139 271 3.8E-85 T 18-10-2018 SHALO_0156 ca76c45eed8032f219ff7c1a449d1e2a 377 SUPERFAMILY SSF53822 20 371 1.55E-60 T 18-10-2018 IPR028082 Periplasmic binding protein-like I SHALO_0156 ca76c45eed8032f219ff7c1a449d1e2a 377 Pfam PF13458 Periplasmic binding protein 20 335 3.1E-55 T 18-10-2018 IPR028081 Leucine-binding protein domain SHALO_0698 477214f26723289d6004530ed3d5231c 241 Gene3D G3DSA:3.30.540.10 4 132 1.6E-16 T 18-10-2018 SHALO_0698 477214f26723289d6004530ed3d5231c 241 Pfam PF00459 Inositol monophosphatase family 38 123 2.3E-8 T 18-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 SHALO_0698 477214f26723289d6004530ed3d5231c 241 SUPERFAMILY SSF56655 3 213 4.32E-22 T 18-10-2018 SHALO_1207 c6c80bbff2c9d63f6ff0278e7abd0348 618 SUPERFAMILY SSF50182 418 485 3.24E-14 T 18-10-2018 IPR010920 LSM domain superfamily SHALO_1207 c6c80bbff2c9d63f6ff0278e7abd0348 618 Pfam PF00924 Mechanosensitive ion channel 376 582 1.0E-41 T 18-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 SHALO_1207 c6c80bbff2c9d63f6ff0278e7abd0348 618 SUPERFAMILY SSF82861 333 417 8.63E-12 T 18-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 SHALO_1207 c6c80bbff2c9d63f6ff0278e7abd0348 618 Gene3D G3DSA:2.30.30.60 435 484 6.4E-12 T 18-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily SHALO_1207 c6c80bbff2c9d63f6ff0278e7abd0348 618 Gene3D G3DSA:3.30.70.100 487 586 1.0E-14 T 18-10-2018 SHALO_1207 c6c80bbff2c9d63f6ff0278e7abd0348 618 SUPERFAMILY SSF82689 488 592 6.8E-19 T 18-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 SHALO_1577 8c7e9e295e8787e47cd15d7343ea773a 207 Pfam PF09335 SNARE associated Golgi protein 33 159 3.6E-22 T 18-10-2018 IPR032816 SNARE associated Golgi protein SHALO_1960 076663a36b6d80f2c8827e02ecd623b5 373 Gene3D G3DSA:3.75.10.10 44 369 1.3E-105 T 18-10-2018 SHALO_1960 076663a36b6d80f2c8827e02ecd623b5 373 SUPERFAMILY SSF55909 41 367 5.71E-105 T 18-10-2018 SHALO_1960 076663a36b6d80f2c8827e02ecd623b5 373 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 47 366 2.1E-99 T 18-10-2018 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 SHALO_0335 95068a4131599207e031c49d27e87df2 232 Gene3D G3DSA:3.40.50.880 1 224 1.3E-58 T 18-10-2018 IPR029062 Class I glutamine amidotransferase-like SHALO_0335 95068a4131599207e031c49d27e87df2 232 Pfam PF00117 Glutamine amidotransferase class-I 23 185 6.7E-22 T 18-10-2018 IPR017926 Glutamine amidotransferase SHALO_0335 95068a4131599207e031c49d27e87df2 232 SUPERFAMILY SSF52317 2 191 1.29E-52 T 18-10-2018 IPR029062 Class I glutamine amidotransferase-like SHALO_2218 a59b80dedcbb303cfb8c8a6689759b5d 333 SUPERFAMILY SSF53448 7 168 1.85E-18 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_2218 a59b80dedcbb303cfb8c8a6689759b5d 333 Gene3D G3DSA:3.90.550.10 5 201 1.4E-18 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_2218 a59b80dedcbb303cfb8c8a6689759b5d 333 Pfam PF00535 Glycosyl transferase family 2 8 185 1.3E-14 T 18-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 SHALO_2174 2f2dd837c7c163f5dee84e7e6437af90 75 Pfam PF11391 Protein of unknown function (DUF2798) 13 71 8.4E-23 T 18-10-2018 IPR021529 Protein of unknown function DUF2798 SHALO_0229 39faacd2091c7318d70e326371560439 362 Pfam PF02677 Uncharacterized BCR, COG1636 1 175 1.4E-51 T 18-10-2018 IPR003828 Epoxyqueuosine reductase QueH MetaCyc: PWY-6700 SHALO_0229 39faacd2091c7318d70e326371560439 362 Hamap MF_02089 Epoxyqueuosine reductase QueH [queH]. 1 178 30.839 T 18-10-2018 IPR003828 Epoxyqueuosine reductase QueH MetaCyc: PWY-6700 SHALO_3019 8a24e8199be10a8fb96418e07c890b49 88 Pfam PF13711 Domain of unknown function (DUF4160) 9 71 8.1E-21 T 18-10-2018 IPR025427 Protein of unknown function DUF4160 SHALO_2248 8f1a96b5778f710256c1d7e7d58e8e89 168 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 3 148 2.7E-57 T 18-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 SHALO_2248 8f1a96b5778f710256c1d7e7d58e8e89 168 Gene3D G3DSA:3.40.50.1000 1 165 1.8E-54 T 18-10-2018 IPR023214 HAD superfamily SHALO_2248 8f1a96b5778f710256c1d7e7d58e8e89 168 Pfam PF13242 HAD-hyrolase-like 99 141 4.4E-10 T 18-10-2018 SHALO_2248 8f1a96b5778f710256c1d7e7d58e8e89 168 PIRSF PIRSF004682 1 162 1.6E-62 T 18-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 SHALO_2248 8f1a96b5778f710256c1d7e7d58e8e89 168 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 3 143 5.8E-43 T 18-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 SHALO_2248 8f1a96b5778f710256c1d7e7d58e8e89 168 SUPERFAMILY SSF56784 1 151 1.65E-42 T 18-10-2018 IPR036412 HAD-like superfamily SHALO_2248 8f1a96b5778f710256c1d7e7d58e8e89 168 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 3 141 9.1E-37 T 18-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 SHALO_1606 0c5d9d80c6981802084fae0d78aa869e 389 SUPERFAMILY SSF53383 2 388 1.63E-117 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase SHALO_1606 0c5d9d80c6981802084fae0d78aa869e 389 Gene3D G3DSA:3.40.640.10 61 284 1.2E-133 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 SHALO_1606 0c5d9d80c6981802084fae0d78aa869e 389 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 227 251 2.2E-13 T 18-10-2018 SHALO_1606 0c5d9d80c6981802084fae0d78aa869e 389 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 113 134 2.2E-13 T 18-10-2018 SHALO_1606 0c5d9d80c6981802084fae0d78aa869e 389 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 160 184 2.2E-13 T 18-10-2018 SHALO_1606 0c5d9d80c6981802084fae0d78aa869e 389 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 196 219 2.2E-13 T 18-10-2018 SHALO_1606 0c5d9d80c6981802084fae0d78aa869e 389 Pfam PF00155 Aminotransferase class I and II 30 381 1.7E-69 T 18-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SHALO_1606 0c5d9d80c6981802084fae0d78aa869e 389 Gene3D G3DSA:3.90.1150.10 24 381 1.2E-133 T 18-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 SHALO_0611 62717205198cc8496cf011de123e569c 484 Pfam PF02321 Outer membrane efflux protein 297 472 2.0E-20 T 18-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 SHALO_0611 62717205198cc8496cf011de123e569c 484 Pfam PF02321 Outer membrane efflux protein 72 264 5.4E-25 T 18-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 SHALO_0611 62717205198cc8496cf011de123e569c 484 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 25 475 2.7E-118 T 18-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 SHALO_0611 62717205198cc8496cf011de123e569c 484 SUPERFAMILY SSF56954 10 476 6.41E-89 T 18-10-2018 SHALO_0611 62717205198cc8496cf011de123e569c 484 Gene3D G3DSA:2.20.200.10 108 360 2.0E-115 T 18-10-2018 SHALO_0611 62717205198cc8496cf011de123e569c 484 Gene3D G3DSA:1.20.1600.10 63 475 2.0E-115 T 18-10-2018 SHALO_0014 f809018f01b73624507c5870fa6cff9c 299 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 15 281 1.0E-93 T 18-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 SHALO_0014 f809018f01b73624507c5870fa6cff9c 299 Pfam PF05681 Fumarate hydratase (Fumerase) 17 279 6.6E-75 T 18-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 SHALO_0419 a997132f79f178bb477b829fcd91b375 435 Gene3D G3DSA:1.20.1600.10 17 419 8.8E-45 T 18-10-2018 SHALO_0419 a997132f79f178bb477b829fcd91b375 435 Pfam PF02321 Outer membrane efflux protein 25 221 4.5E-17 T 18-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 SHALO_0419 a997132f79f178bb477b829fcd91b375 435 Pfam PF02321 Outer membrane efflux protein 247 412 3.5E-15 T 18-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 SHALO_0419 a997132f79f178bb477b829fcd91b375 435 SUPERFAMILY SSF56954 4 411 2.88E-45 T 18-10-2018 SHALO_2383 54562762acb884cdbfd2938a9ee3c223 70 Pfam PF13179 Family of unknown function (DUF4006) 1 64 7.5E-30 T 18-10-2018 IPR025065 Protein of unknown function DUF4006 SHALO_0056 49dbb4f838f59e87baa4e32f79bd0ea5 326 Pfam PF14390 Putative PD-(D/E)XK family member, (DUF4420) 7 310 2.4E-44 T 18-10-2018 IPR025534 Putative PD-(D/E)XK family member (DUF4420) SHALO_1650 3ff2a7e251ff2ccce8933d514b65f735 169 SUPERFAMILY SSF53474 11 168 1.55E-10 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold SHALO_1650 3ff2a7e251ff2ccce8933d514b65f735 169 Gene3D G3DSA:3.40.50.1820 10 169 2.7E-7 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold SHALO_2904 ecd668eaf7d407b477e83ee01acbd20a 260 SUPERFAMILY SSF53474 30 248 1.51E-24 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold SHALO_2904 ecd668eaf7d407b477e83ee01acbd20a 260 Gene3D G3DSA:3.40.50.1820 47 243 4.0E-21 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold SHALO_2904 ecd668eaf7d407b477e83ee01acbd20a 260 Pfam PF00561 alpha/beta hydrolase fold 90 170 2.2E-7 T 18-10-2018 IPR000073 Alpha/beta hydrolase fold-1 SHALO_1433 4a5d5e6ba8e9adfc1386f57deacaed75 201 Pfam PF01914 MarC family integral membrane protein 5 199 1.2E-37 T 18-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 SHALO_1433 4a5d5e6ba8e9adfc1386f57deacaed75 201 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 3 196 2.6E-34 T 18-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 SHALO_2057 2f1958e55559c94a5450845bdac3dd3d 276 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 1 268 3.0E-13 T 18-10-2018 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 SHALO_2822 96c11ebe1784877f9b89d85ba4e6efb9 363 Pfam PF12698 ABC-2 family transporter protein 24 355 7.0E-40 T 18-10-2018 SHALO_1995 6b5f1b9c9d0e43ceeb190b4cd1e5554b 299 SUPERFAMILY SSF51261 24 261 1.41E-50 T 18-10-2018 IPR011055 Duplicated hybrid motif SHALO_1995 6b5f1b9c9d0e43ceeb190b4cd1e5554b 299 Gene3D G3DSA:2.70.70.10 107 265 5.0E-42 T 18-10-2018 IPR011055 Duplicated hybrid motif SHALO_1995 6b5f1b9c9d0e43ceeb190b4cd1e5554b 299 Pfam PF01551 Peptidase family M23 161 258 1.1E-29 T 18-10-2018 IPR016047 Peptidase M23 SHALO_1683 0633d9f1df7db1801c76ecfe8ff5302b 92 Gene3D G3DSA:1.10.3350.10 12 92 5.2E-24 T 18-10-2018 IPR023126 HP0242-like superfamily SHALO_1683 0633d9f1df7db1801c76ecfe8ff5302b 92 Pfam PF09442 Domain of unknown function (DUF2018) 10 92 8.2E-26 T 18-10-2018 IPR018563 Protein of unknown function DUF2018 SHALO_1683 0633d9f1df7db1801c76ecfe8ff5302b 92 SUPERFAMILY SSF158752 1 91 3.4E-24 T 18-10-2018 IPR023126 HP0242-like superfamily SHALO_1417 51ca82ae6da5ec0ad261f59f5e22d6c4 853 Pfam PF13116 Protein of unknown function 206 453 1.3E-38 T 18-10-2018 IPR025263 Domain of unknown function DUF3971 SHALO_1417 51ca82ae6da5ec0ad261f59f5e22d6c4 853 Pfam PF13109 AsmA-like C-terminal region 631 845 6.7E-65 T 18-10-2018 IPR039441 AsmA-like C-terminal region SHALO_0769 62adb25f618320ec1513f783a8292a9e 151 Pfam PF06271 RDD family 19 144 9.8E-22 T 18-10-2018 IPR010432 RDD SHALO_0532 65f0486cfb8ab9575f47a7c39d6d6377 311 SUPERFAMILY SSF52467 17 217 1.05E-5 T 18-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily SHALO_0532 65f0486cfb8ab9575f47a7c39d6d6377 311 Pfam PF13289 SIR2-like domain 134 234 2.2E-13 T 18-10-2018 IPR039444 SIR2-like domain SHALO_0693 f9111ee6dbd7c16896a3047b06865fd5 233 Pfam PF01048 Phosphorylase superfamily 2 225 2.6E-48 T 18-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SHALO_0693 f9111ee6dbd7c16896a3047b06865fd5 233 Gene3D G3DSA:3.40.50.1580 1 232 1.9E-65 T 18-10-2018 SHALO_0693 f9111ee6dbd7c16896a3047b06865fd5 233 SUPERFAMILY SSF53167 1 228 1.3E-66 T 18-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 SHALO_0693 f9111ee6dbd7c16896a3047b06865fd5 233 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 226 1.1E-50 T 18-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SHALO_0241 beaea6cb4e592d3ee2720f65d7b8c44a 261 SUPERFAMILY SSF64167 3 260 2.09E-78 T 18-10-2018 SHALO_0241 beaea6cb4e592d3ee2720f65d7b8c44a 261 Pfam PF01975 Survival protein SurE 4 196 1.1E-57 T 18-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 SHALO_0241 beaea6cb4e592d3ee2720f65d7b8c44a 261 Gene3D G3DSA:3.40.1210.10 1 261 5.5E-86 T 18-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 SHALO_0241 beaea6cb4e592d3ee2720f65d7b8c44a 261 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 3 248 8.8E-69 T 18-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 SHALO_0241 beaea6cb4e592d3ee2720f65d7b8c44a 261 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 2 261 36.395 T 18-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 SHALO_2491 851ba036477a505b291556b4d0db7928 110 Pfam PF13310 Virulence protein RhuM family 40 94 2.1E-8 T 18-10-2018 IPR011204 Virulence protein RhuM-like SHALO_2791 dd4fa7fa9cc2c0e8d9569a99fdffd869 102 Pfam PF01527 Transposase 2 76 2.1E-8 T 18-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SHALO_2791 dd4fa7fa9cc2c0e8d9569a99fdffd869 102 SUPERFAMILY SSF46689 4 83 1.13E-10 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SHALO_1764 559a0811b3e678161975e9769fc863fe 223 TIGRFAM TIGR01737 FGAM_synth_I: phosphoribosylformylglycinamidine synthase I 1 222 7.5E-89 T 18-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 SHALO_1764 559a0811b3e678161975e9769fc863fe 223 SUPERFAMILY SSF52317 1 222 4.31E-71 T 18-10-2018 IPR029062 Class I glutamine amidotransferase-like SHALO_1764 559a0811b3e678161975e9769fc863fe 223 PIRSF PIRSF001586 1 223 2.1E-79 T 18-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 SHALO_1764 559a0811b3e678161975e9769fc863fe 223 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 3 209 2.2E-47 T 18-10-2018 SHALO_1764 559a0811b3e678161975e9769fc863fe 223 Hamap MF_00421 Phosphoribosylformylglycinamidine synthase subunit PurQ [purQ]. 1 223 40.106 T 18-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 SHALO_1764 559a0811b3e678161975e9769fc863fe 223 Gene3D G3DSA:3.40.50.880 1 223 8.4E-68 T 18-10-2018 IPR029062 Class I glutamine amidotransferase-like SHALO_1764 559a0811b3e678161975e9769fc863fe 223 SMART SM01211 1 222 4.1E-110 T 18-10-2018 SHALO_0390 034b70b1d7e30d714fe30b86c3b5a502 107 Gene3D G3DSA:1.10.238.10 29 101 9.3E-12 T 18-10-2018 SHALO_0390 034b70b1d7e30d714fe30b86c3b5a502 107 ProSitePatterns PS00018 EF-hand calcium-binding domain. 34 46 - T 18-10-2018 IPR018247 EF-Hand 1, calcium-binding site SHALO_0390 034b70b1d7e30d714fe30b86c3b5a502 107 ProSitePatterns PS00018 EF-hand calcium-binding domain. 77 89 - T 18-10-2018 IPR018247 EF-Hand 1, calcium-binding site SHALO_0390 034b70b1d7e30d714fe30b86c3b5a502 107 SUPERFAMILY SSF47473 29 96 2.98E-9 T 18-10-2018 IPR011992 EF-hand domain pair SHALO_0390 034b70b1d7e30d714fe30b86c3b5a502 107 Pfam PF13202 EF hand 30 49 1.9E-4 T 18-10-2018 IPR002048 EF-hand domain GO:0005509 SHALO_0390 034b70b1d7e30d714fe30b86c3b5a502 107 Pfam PF13202 EF hand 73 91 9.5E-5 T 18-10-2018 IPR002048 EF-hand domain GO:0005509 SHALO_2135 255f6b8d8e0a0867b9e32f964e99b098 217 ProDom PD037531 MEMBRANE HYDROGENASE SUBUNIT COMPONENT HYDROGENASE-4 E OXIDOREDUCTASE PRECURSOR SIGNAL 1.-.-.- 12 193 2.0E-72 T 18-10-2018 SHALO_2135 255f6b8d8e0a0867b9e32f964e99b098 217 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 131 211 3.9E-7 T 18-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like SHALO_1374 7b46949ca2ced7a16283574e815144ce 225 SUPERFAMILY SSF81336 72 215 5.36E-35 T 18-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SHALO_1374 7b46949ca2ced7a16283574e815144ce 225 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 19 217 2.5E-39 T 18-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SHALO_1374 7b46949ca2ced7a16283574e815144ce 225 Pfam PF00119 ATP synthase A chain 23 215 5.5E-52 T 18-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SHALO_1374 7b46949ca2ced7a16283574e815144ce 225 ProSitePatterns PS00449 ATP synthase a subunit signature. 161 170 - T 18-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SHALO_1374 7b46949ca2ced7a16283574e815144ce 225 Hamap MF_01393 ATP synthase subunit a [atpB]. 11 222 14.53 T 18-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SHALO_1374 7b46949ca2ced7a16283574e815144ce 225 Gene3D G3DSA:1.20.120.220 70 225 4.1E-39 T 18-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SHALO_1374 7b46949ca2ced7a16283574e815144ce 225 PRINTS PR00123 ATP synthase A subunit signature 202 217 2.0E-13 T 18-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SHALO_1374 7b46949ca2ced7a16283574e815144ce 225 PRINTS PR00123 ATP synthase A subunit signature 78 94 2.0E-13 T 18-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SHALO_1374 7b46949ca2ced7a16283574e815144ce 225 PRINTS PR00123 ATP synthase A subunit signature 138 153 2.0E-13 T 18-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SHALO_1374 7b46949ca2ced7a16283574e815144ce 225 PRINTS PR00123 ATP synthase A subunit signature 158 180 2.0E-13 T 18-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SHALO_0599 5b3aa88548ad6fc05908dc15aff86df7 1243 SUPERFAMILY SSF52540 207 382 8.21E-10 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_2346 d6a871761213e76bada8d915d6971af1 180 SUPERFAMILY SSF55620 1 177 2.67E-23 T 18-10-2018 SHALO_2346 d6a871761213e76bada8d915d6971af1 180 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 4 177 3.2E-33 T 18-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 SHALO_2346 d6a871761213e76bada8d915d6971af1 180 Gene3D G3DSA:3.30.479.10 1 180 6.5E-54 T 18-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 SHALO_1724 39c730741e9c9e18a044ffb54d4729c9 260 SMART SM00267 101 260 1.8E-19 T 18-10-2018 IPR000160 GGDEF domain SHALO_1724 39c730741e9c9e18a044ffb54d4729c9 260 Pfam PF00990 Diguanylate cyclase, GGDEF domain 113 258 3.8E-29 T 18-10-2018 IPR000160 GGDEF domain SHALO_1724 39c730741e9c9e18a044ffb54d4729c9 260 SUPERFAMILY SSF55073 117 258 1.41E-29 T 18-10-2018 IPR029787 Nucleotide cyclase SHALO_1724 39c730741e9c9e18a044ffb54d4729c9 260 Gene3D G3DSA:3.30.70.270 98 260 2.1E-35 T 18-10-2018 SHALO_1724 39c730741e9c9e18a044ffb54d4729c9 260 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 113 258 2.0E-29 T 18-10-2018 IPR000160 GGDEF domain SHALO_0907 e9001a245887b57fdac3bf9139784a28 791 Pfam PF01578 Cytochrome C assembly protein 553 753 5.2E-36 T 18-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 SHALO_0907 e9001a245887b57fdac3bf9139784a28 791 Pfam PF05140 ResB-like family 75 181 1.9E-20 T 18-10-2018 IPR007816 ResB-like domain SHALO_2932 02cb090542e085f343ce6d8a85927656 235 Pfam PF11741 AMIN domain 150 234 4.9E-10 T 18-10-2018 IPR021731 AMIN domain SHALO_1265 d1f3ddafdb10ccedc32eea92eecb9b3b 303 TIGRFAM TIGR01287 nifH: nitrogenase iron protein 5 291 1.7E-126 T 18-10-2018 IPR005977 Nitrogenase iron protein NifH GO:0009399|GO:0016163|GO:0016612|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 SHALO_1265 d1f3ddafdb10ccedc32eea92eecb9b3b 303 SUPERFAMILY SSF52540 5 286 2.09E-52 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_1265 d1f3ddafdb10ccedc32eea92eecb9b3b 303 Gene3D G3DSA:3.40.50.300 3 291 1.5E-61 T 18-10-2018 SHALO_1265 d1f3ddafdb10ccedc32eea92eecb9b3b 303 ProSitePatterns PS00692 NifH/frxC family signature 2. 140 153 - T 18-10-2018 IPR030655 NifH/chlL conserved site SHALO_1265 d1f3ddafdb10ccedc32eea92eecb9b3b 303 PIRSF PIRSF000363 3 292 1.8E-111 T 18-10-2018 IPR000392 NifH/frxC family GO:0005524|GO:0016491|GO:0055114 SHALO_1265 d1f3ddafdb10ccedc32eea92eecb9b3b 303 PRINTS PR00091 Nitrogenase component II signature 100 114 3.5E-37 T 18-10-2018 SHALO_1265 d1f3ddafdb10ccedc32eea92eecb9b3b 303 PRINTS PR00091 Nitrogenase component II signature 33 48 3.5E-37 T 18-10-2018 SHALO_1265 d1f3ddafdb10ccedc32eea92eecb9b3b 303 PRINTS PR00091 Nitrogenase component II signature 10 23 3.5E-37 T 18-10-2018 SHALO_1265 d1f3ddafdb10ccedc32eea92eecb9b3b 303 PRINTS PR00091 Nitrogenase component II signature 139 154 3.5E-37 T 18-10-2018 SHALO_1265 d1f3ddafdb10ccedc32eea92eecb9b3b 303 Pfam PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family 5 288 3.2E-123 T 18-10-2018 IPR000392 NifH/frxC family GO:0005524|GO:0016491|GO:0055114 SHALO_1265 d1f3ddafdb10ccedc32eea92eecb9b3b 303 ProSitePatterns PS00746 NifH/frxC family signature 1. 102 114 - T 18-10-2018 IPR030655 NifH/chlL conserved site SHALO_0876 39668e1911557476090025c47b9333aa 139 Gene3D G3DSA:3.40.390.30 6 133 2.4E-34 T 18-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 SHALO_0876 39668e1911557476090025c47b9333aa 139 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 1 131 20.218 T 18-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 SHALO_0876 39668e1911557476090025c47b9333aa 139 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 99 109 - T 18-10-2018 IPR020549 Endoribonuclease YbeY, conserved site SHALO_0876 39668e1911557476090025c47b9333aa 139 Pfam PF02130 Uncharacterized protein family UPF0054 15 125 7.4E-33 T 18-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 SHALO_0876 39668e1911557476090025c47b9333aa 139 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 28 127 1.0E-28 T 18-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 SHALO_0876 39668e1911557476090025c47b9333aa 139 SUPERFAMILY SSF55486 20 135 1.07E-33 T 18-10-2018 SHALO_1719 9929ad1a5c9a944595fe2539ef2f5865 134 Pfam PF02082 Transcriptional regulator 1 80 3.9E-18 T 18-10-2018 IPR000944 Transcription regulator Rrf2-type SHALO_1719 9929ad1a5c9a944595fe2539ef2f5865 134 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 132 1.7E-31 T 18-10-2018 IPR000944 Transcription regulator Rrf2-type SHALO_1719 9929ad1a5c9a944595fe2539ef2f5865 134 Gene3D G3DSA:1.10.10.10 1 134 2.0E-29 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_1719 9929ad1a5c9a944595fe2539ef2f5865 134 SUPERFAMILY SSF46785 3 132 5.45E-25 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SHALO_1909 693980af430c2995753caaa28c1743c5 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 8 23 1.3E-16 T 18-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SHALO_1909 693980af430c2995753caaa28c1743c5 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 41 56 1.3E-16 T 18-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SHALO_1909 693980af430c2995753caaa28c1743c5 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 56 71 1.3E-16 T 18-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SHALO_1909 693980af430c2995753caaa28c1743c5 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 28 39 1.3E-16 T 18-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SHALO_1909 693980af430c2995753caaa28c1743c5 106 SMART SM00418 7 84 1.3E-22 T 18-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SHALO_1909 693980af430c2995753caaa28c1743c5 106 Pfam PF01022 Bacterial regulatory protein, arsR family 13 59 1.4E-14 T 18-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SHALO_1909 693980af430c2995753caaa28c1743c5 106 Gene3D G3DSA:1.10.10.10 1 91 1.9E-24 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_1909 693980af430c2995753caaa28c1743c5 106 SUPERFAMILY SSF46785 4 85 2.0E-22 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SHALO_1407 b43ddc1129b89fd86bf678824a378555 705 Pfam PF00593 TonB dependent receptor 289 701 1.3E-30 T 18-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel SHALO_1407 b43ddc1129b89fd86bf678824a378555 705 SUPERFAMILY SSF56935 55 702 4.12E-105 T 18-10-2018 SHALO_1407 b43ddc1129b89fd86bf678824a378555 705 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 65 702 7.1E-91 T 18-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 SHALO_1407 b43ddc1129b89fd86bf678824a378555 705 Gene3D G3DSA:2.170.130.10 45 173 5.8E-29 T 18-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily SHALO_1407 b43ddc1129b89fd86bf678824a378555 705 Pfam PF07715 TonB-dependent Receptor Plug Domain 64 163 4.8E-17 T 18-10-2018 IPR012910 TonB-dependent receptor, plug domain SHALO_1407 b43ddc1129b89fd86bf678824a378555 705 Gene3D G3DSA:2.40.170.20 174 703 1.4E-82 T 18-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily SHALO_0928 9234a742352ee57be7b0bc3f9bfe30ad 286 Pfam PF00892 EamA-like transporter family 3 128 1.1E-6 T 18-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 SHALO_0928 9234a742352ee57be7b0bc3f9bfe30ad 286 Pfam PF00892 EamA-like transporter family 139 266 1.7E-6 T 18-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 SHALO_1735 6c969567e117e65be893179def8cdec4 351 SMART SM00729 1 216 1.3E-38 T 18-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 SHALO_1735 6c969567e117e65be893179def8cdec4 351 Gene3D G3DSA:3.80.30.20 1 283 1.1E-80 T 18-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe SHALO_1735 6c969567e117e65be893179def8cdec4 351 SUPERFAMILY SSF102114 3 337 1.44E-81 T 18-10-2018 SHALO_1735 6c969567e117e65be893179def8cdec4 351 Pfam PF04055 Radical SAM superfamily 6 159 4.7E-17 T 18-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 SHALO_1735 6c969567e117e65be893179def8cdec4 351 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 3 347 9.7E-97 T 18-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 SHALO_2926 8952ccbf4bac5ad112bc5e5844bbc260 662 Gene3D G3DSA:3.40.50.2000 477 640 4.5E-18 T 18-10-2018 SHALO_2926 8952ccbf4bac5ad112bc5e5844bbc260 662 SUPERFAMILY SSF53756 350 638 3.56E-9 T 18-10-2018 SHALO_1358 0fcae59380c207bdd4cc8ca4b9839254 546 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 33 472 3.9E-58 T 18-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 SHALO_1358 0fcae59380c207bdd4cc8ca4b9839254 546 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 454 474 - T 18-10-2018 IPR018212 Sodium/solute symporter, conserved site SHALO_1358 0fcae59380c207bdd4cc8ca4b9839254 546 Gene3D G3DSA:1.20.1730.10 22 543 4.3E-75 T 18-10-2018 IPR038377 Sodium/glucose symporter superfamily SHALO_1358 0fcae59380c207bdd4cc8ca4b9839254 546 Pfam PF00474 Sodium:solute symporter family 33 472 1.3E-56 T 18-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 SHALO_2479 fef2e3a7543daa9796f06d9550169021 150 TIGRFAM TIGR04488 SoxY_true_GGCGG: thiosulfate oxidation carrier protein SoxY 2 150 9.9E-46 T 18-10-2018 IPR016568 Sulphur oxidation, SoxY SHALO_2479 fef2e3a7543daa9796f06d9550169021 150 PIRSF PIRSF010312 1 150 1.4E-44 T 18-10-2018 IPR016568 Sulphur oxidation, SoxY SHALO_2479 fef2e3a7543daa9796f06d9550169021 150 Pfam PF13501 Sulfur oxidation protein SoxY 45 148 3.2E-34 T 18-10-2018 IPR032711 Ig-like SoxY domain SHALO_2479 fef2e3a7543daa9796f06d9550169021 150 Gene3D G3DSA:2.60.40.2470 28 150 9.1E-41 T 18-10-2018 IPR038162 Ig-like SoxY domain superfamily SHALO_2110 8cb1ef59fcd5703e516719c6097b8af4 203 Pfam PF13599 Pentapeptide repeats (9 copies) 104 165 5.3E-11 T 18-10-2018 IPR001646 Pentapeptide repeat SHALO_2110 8cb1ef59fcd5703e516719c6097b8af4 203 Pfam PF13599 Pentapeptide repeats (9 copies) 32 95 7.9E-12 T 18-10-2018 IPR001646 Pentapeptide repeat SHALO_2110 8cb1ef59fcd5703e516719c6097b8af4 203 Gene3D G3DSA:2.160.20.80 7 203 3.3E-55 T 18-10-2018 SHALO_2110 8cb1ef59fcd5703e516719c6097b8af4 203 SUPERFAMILY SSF141571 18 202 7.36E-43 T 18-10-2018 SHALO_0538 288c753418ab92ac9099d1c5793a39ae 133 SUPERFAMILY SSF54427 26 131 1.93E-31 T 18-10-2018 IPR032710 NTF2-like domain superfamily SHALO_0538 288c753418ab92ac9099d1c5793a39ae 133 Gene3D G3DSA:3.10.450.50 6 132 4.0E-38 T 18-10-2018 SHALO_0538 288c753418ab92ac9099d1c5793a39ae 133 Pfam PF02810 SEC-C motif 5 21 2.7E-7 T 18-10-2018 IPR004027 SEC-C motif SHALO_0820 09323182eabd573fe75516ee0c85ce3b 539 SUPERFAMILY SSF55073 380 532 2.04E-41 T 18-10-2018 IPR029787 Nucleotide cyclase SHALO_0820 09323182eabd573fe75516ee0c85ce3b 539 Gene3D G3DSA:3.30.450.20 52 187 7.5E-13 T 18-10-2018 SHALO_0820 09323182eabd573fe75516ee0c85ce3b 539 Pfam PF00990 Diguanylate cyclase, GGDEF domain 375 532 2.0E-45 T 18-10-2018 IPR000160 GGDEF domain SHALO_0820 09323182eabd573fe75516ee0c85ce3b 539 SMART SM00267 364 539 9.8E-48 T 18-10-2018 IPR000160 GGDEF domain SHALO_0820 09323182eabd573fe75516ee0c85ce3b 539 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 372 532 1.8E-36 T 18-10-2018 IPR000160 GGDEF domain SHALO_0820 09323182eabd573fe75516ee0c85ce3b 539 Gene3D G3DSA:3.30.70.270 373 538 1.9E-48 T 18-10-2018 SHALO_0820 09323182eabd573fe75516ee0c85ce3b 539 Gene3D G3DSA:1.20.1480.50 278 372 3.9E-5 T 18-10-2018 SHALO_0820 09323182eabd573fe75516ee0c85ce3b 539 Pfam PF02743 Cache domain 54 278 1.1E-18 T 18-10-2018 IPR033479 Double Cache domain 1 SHALO_0620 dd97b3600a5824efedb63e0907c83707 427 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 421 1.7E-150 T 18-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 SHALO_0620 dd97b3600a5824efedb63e0907c83707 427 PIRSF PIRSF006066 1 427 1.6E-163 T 18-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 SHALO_0620 dd97b3600a5824efedb63e0907c83707 427 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 415 4.3E-122 T 18-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit SHALO_1183 90a78fa1f8d085c06f3126c05fe9504a 417 Gene3D G3DSA:1.10.1070.20 217 304 2.2E-8 T 18-10-2018 SHALO_1183 90a78fa1f8d085c06f3126c05fe9504a 417 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 5 95 2.5E-12 T 18-10-2018 IPR017508 HipA, N-terminal subdomain 1 SHALO_1183 90a78fa1f8d085c06f3126c05fe9504a 417 Pfam PF13657 HipA N-terminal domain 5 99 4.2E-14 T 18-10-2018 IPR017508 HipA, N-terminal subdomain 1 SHALO_1183 90a78fa1f8d085c06f3126c05fe9504a 417 Pfam PF07804 HipA-like C-terminal domain 137 350 1.3E-44 T 18-10-2018 IPR012893 HipA-like, C-terminal SHALO_2251 ced5724dbabc907aaa4f4a338268193d 79 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 9 38 5.4E-10 T 18-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type SHALO_2251 ced5724dbabc907aaa4f4a338268193d 79 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 5 46 2.9E-13 T 18-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type SHALO_2229 f8ed8610ab314ce58c560669d548d663 252 Gene3D G3DSA:3.30.460.10 1 105 7.8E-8 T 18-10-2018 SHALO_2229 f8ed8610ab314ce58c560669d548d663 252 SUPERFAMILY SSF81301 8 95 6.54E-8 T 18-10-2018 SHALO_2229 f8ed8610ab314ce58c560669d548d663 252 SUPERFAMILY SSF81593 101 236 2.71E-16 T 18-10-2018 SHALO_2229 f8ed8610ab314ce58c560669d548d663 252 Gene3D G3DSA:1.20.120.330 159 244 1.7E-5 T 18-10-2018 SHALO_2229 f8ed8610ab314ce58c560669d548d663 252 Pfam PF01909 Nucleotidyltransferase domain 15 89 2.6E-7 T 18-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 SHALO_1370 15dff3f8e39f6176b6209dc21b43782f 270 Gene3D G3DSA:1.10.3720.10 55 265 4.9E-10 T 18-10-2018 IPR035906 MetI-like superfamily SHALO_1370 15dff3f8e39f6176b6209dc21b43782f 270 SUPERFAMILY SSF161098 61 248 1.94E-14 T 18-10-2018 IPR035906 MetI-like superfamily SHALO_1370 15dff3f8e39f6176b6209dc21b43782f 270 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 260 1.2E-18 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 SHALO_2970 fe6a1e5905a1546f3487718cb4b939d6 417 SUPERFAMILY SSF47162 219 356 2.48E-6 T 18-10-2018 SHALO_0792 d4b511c86db1a01866283ea8f4618ac6 81 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 5 79 7.3E-10 T 18-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 SHALO_0792 d4b511c86db1a01866283ea8f4618ac6 81 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 8 75 2.0E-11 T 18-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 SHALO_1579 1fc10bd6f329e8f71da9992c92ea9e38 192 Gene3D G3DSA:3.40.50.300 3 192 1.1E-48 T 18-10-2018 SHALO_1579 1fc10bd6f329e8f71da9992c92ea9e38 192 SMART SM00382 31 192 6.1E-9 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_1579 1fc10bd6f329e8f71da9992c92ea9e38 192 SUPERFAMILY SSF52540 4 191 4.42E-47 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_1579 1fc10bd6f329e8f71da9992c92ea9e38 192 Pfam PF00005 ABC transporter 22 147 4.3E-25 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_0037 2cac9dabf4e1c6888308409aa6db456c 185 SUPERFAMILY SSF52499 2 182 7.46E-48 T 18-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 SHALO_0037 2cac9dabf4e1c6888308409aa6db456c 185 Pfam PF00857 Isochorismatase family 4 150 1.2E-32 T 18-10-2018 IPR000868 Isochorismatase-like GO:0003824 SHALO_0037 2cac9dabf4e1c6888308409aa6db456c 185 Gene3D G3DSA:3.40.50.850 1 185 2.5E-48 T 18-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 SHALO_3012 4dec145c312eb61291179f428df0c8fc 322 Pfam PF11335 Protein of unknown function (DUF3137) 170 314 5.8E-37 T 18-10-2018 IPR021484 Protein of unknown function DUF3137 SHALO_1336 03b3b1e3bf447415c29621af0c9e6b10 265 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 4 52 2.8E-13 T 18-10-2018 IPR025713 Motility protein B, N-terminal domain SHALO_1336 03b3b1e3bf447415c29621af0c9e6b10 265 Gene3D G3DSA:3.30.1330.60 99 265 1.7E-43 T 18-10-2018 IPR036737 OmpA-like domain superfamily SHALO_1336 03b3b1e3bf447415c29621af0c9e6b10 265 SUPERFAMILY SSF103088 119 239 3.14E-26 T 18-10-2018 IPR036737 OmpA-like domain superfamily SHALO_1336 03b3b1e3bf447415c29621af0c9e6b10 265 Pfam PF00691 OmpA family 132 233 5.4E-18 T 18-10-2018 IPR006665 OmpA-like domain SHALO_2003 7add1cc51cadc79ad635cec18d3ec1fb 410 SUPERFAMILY SSF56317 189 409 3.27E-21 T 18-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily SHALO_2003 7add1cc51cadc79ad635cec18d3ec1fb 410 Gene3D G3DSA:3.60.110.10 192 408 5.7E-9 T 18-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily SHALO_2003 7add1cc51cadc79ad635cec18d3ec1fb 410 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 61 410 2.1E-53 T 18-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 SHALO_2003 7add1cc51cadc79ad635cec18d3ec1fb 410 Pfam PF00795 Carbon-nitrogen hydrolase 222 392 5.1E-7 T 18-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 SHALO_0911 072223a970d98680f296bc2b732af696 188 Pfam PF06821 Serine hydrolase 4 182 8.8E-28 T 18-10-2018 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 SHALO_0911 072223a970d98680f296bc2b732af696 188 Gene3D G3DSA:3.40.50.1820 1 188 2.0E-43 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold SHALO_0911 072223a970d98680f296bc2b732af696 188 SUPERFAMILY SSF53474 1 184 1.84E-32 T 18-10-2018 IPR029058 Alpha/Beta hydrolase fold SHALO_0343 c441b7a0bb975a885fc285d100fc2b23 275 Pfam PF12679 ABC-2 family transporter protein 7 274 1.6E-19 T 18-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 SHALO_2106 734b510ae8f7932da03dfe0f0ff60b2f 149 SUPERFAMILY SSF53271 3 138 4.59E-24 T 18-10-2018 IPR029057 Phosphoribosyltransferase-like SHALO_2106 734b510ae8f7932da03dfe0f0ff60b2f 149 Gene3D G3DSA:3.40.50.2020 1 148 8.0E-31 T 18-10-2018 SHALO_2106 734b510ae8f7932da03dfe0f0ff60b2f 149 Pfam PF00156 Phosphoribosyl transferase domain 7 146 8.2E-24 T 18-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 SHALO_0182 3c7fb4e4b758de7b24f29ba8f3c29e62 132 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 9 129 16.655 T 18-10-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 SHALO_0182 3c7fb4e4b758de7b24f29ba8f3c29e62 132 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 36 128 6.1E-32 T 18-10-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0182 3c7fb4e4b758de7b24f29ba8f3c29e62 132 Gene3D G3DSA:1.20.58.1610 6 129 3.7E-35 T 18-10-2018 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_2977 d76a4dd1442ec7c93eb7ba870ff774fa 367 Pfam PF13247 4Fe-4S dicluster domain 124 218 1.1E-31 T 18-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_2977 d76a4dd1442ec7c93eb7ba870ff774fa 367 TIGRFAM TIGR03478 DMSO_red_II_bet: DMSO reductase family type II enzyme, iron-sulfur subunit 3 323 1.7E-154 T 18-10-2018 IPR017839 DMSO reductase family, type II, iron-sulphur subunit GO:0009061|GO:0042597|GO:0051536 SHALO_2977 d76a4dd1442ec7c93eb7ba870ff774fa 367 SUPERFAMILY SSF54862 4 293 1.99E-81 T 18-10-2018 SHALO_2977 d76a4dd1442ec7c93eb7ba870ff774fa 367 Gene3D G3DSA:3.30.70.20 1 333 1.7E-129 T 18-10-2018 SHALO_2458 79da9cfed8a5b17576ceda98798d19b1 199 SUPERFAMILY SSF103039 5 197 2.88E-28 T 18-10-2018 IPR028976 CheC-like superfamily SHALO_2458 79da9cfed8a5b17576ceda98798d19b1 199 Gene3D G3DSA:3.40.1550.10 5 197 2.4E-33 T 18-10-2018 IPR028976 CheC-like superfamily SHALO_0339 33822e288e9eb8e9e461c357c0406501 260 SUPERFAMILY SSF161098 67 245 1.28E-19 T 18-10-2018 IPR035906 MetI-like superfamily SHALO_0339 33822e288e9eb8e9e461c357c0406501 260 Gene3D G3DSA:1.10.3720.10 65 256 2.8E-16 T 18-10-2018 IPR035906 MetI-like superfamily SHALO_0339 33822e288e9eb8e9e461c357c0406501 260 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 242 1.7E-10 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 SHALO_0609 9b9e5a34bafd35981add502fa2ede781 540 TIGRFAM TIGR00702 TIGR00702: YcaO-type kinase domain 10 390 2.1E-65 T 18-10-2018 IPR003776 YcaO-like domain SHALO_0609 9b9e5a34bafd35981add502fa2ede781 540 Gene3D G3DSA:1.10.490.140 156 251 1.0E-6 T 18-10-2018 SHALO_0609 9b9e5a34bafd35981add502fa2ede781 540 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 57 376 1.2E-60 T 18-10-2018 IPR003776 YcaO-like domain SHALO_0919 998c178f70345524773d57816c5e7795 115 Pfam PF03788 LrgA family 12 104 5.0E-22 T 18-10-2018 IPR005538 LrgA/CidA family GO:0016021 SHALO_1493 953457bef1f5c7622637c40d53b024b5 156 SUPERFAMILY SSF52121 9 154 1.02E-56 T 18-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 SHALO_1493 953457bef1f5c7622637c40d53b024b5 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 15 151 7.2E-53 T 18-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 SHALO_1493 953457bef1f5c7622637c40d53b024b5 156 Gene3D G3DSA:3.40.50.960 1 155 5.1E-56 T 18-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 SHALO_1493 953457bef1f5c7622637c40d53b024b5 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 9 154 29.721 T 18-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 SHALO_1493 953457bef1f5c7622637c40d53b024b5 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 15 150 6.4E-55 T 18-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 SHALO_1920 535f1712bfee4a98824ec75338a41578 195 Hamap MF_01515 UPF0316 protein . 13 181 26.955 T 18-10-2018 IPR022930 Protein of unknown function UPF0316 SHALO_1920 535f1712bfee4a98824ec75338a41578 195 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 122 170 1.3E-6 T 18-10-2018 IPR019264 Domain of unknown function DUF2179 SHALO_1151 c3e000d55d7f92b4fed98af2f362f2df 301 Gene3D G3DSA:1.20.1530.20 1 301 1.5E-102 T 18-10-2018 IPR038770 Sodium/solute symporter superfamily SHALO_1151 c3e000d55d7f92b4fed98af2f362f2df 301 Pfam PF01758 Sodium Bile acid symporter family 35 214 4.3E-43 T 18-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 SHALO_0822 ed0983166a70afa5620d3bd7c86d75ca 100 Hamap MF_02117 N(2)-fixation sustaining protein CowN [cowN]. 2 100 16.776 T 18-10-2018 IPR024899 Nitrogen fixation-sustaining protein CowN GO:0009399 SHALO_0901 036ff9a08125fa7f43dfe6ee5e586ca6 266 Pfam PF13531 Bacterial extracellular solute-binding protein 27 254 9.8E-23 T 18-10-2018 SHALO_0901 036ff9a08125fa7f43dfe6ee5e586ca6 266 SUPERFAMILY SSF53850 26 257 6.21E-29 T 18-10-2018 SHALO_0901 036ff9a08125fa7f43dfe6ee5e586ca6 266 Gene3D G3DSA:3.40.190.10 34 245 2.0E-22 T 18-10-2018 SHALO_0901 036ff9a08125fa7f43dfe6ee5e586ca6 266 Gene3D G3DSA:3.40.190.10 109 218 2.0E-22 T 18-10-2018 SHALO_2393 a73a3a36d16a6e1aaf9abbaf303c51c4 175 SUPERFAMILY SSF158791 66 161 7.72E-7 T 18-10-2018 SHALO_0451 3640b6ac953458f71f2bca998f2f7d2b 299 Gene3D G3DSA:3.20.20.370 102 298 1.2E-11 T 18-10-2018 SHALO_0451 3640b6ac953458f71f2bca998f2f7d2b 299 SUPERFAMILY SSF88713 101 285 1.89E-8 T 18-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 SHALO_1451 b46ace3bd300669bca110c4f13359cd7 90 Pfam PF00708 Acylphosphatase 7 88 2.8E-17 T 18-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SHALO_1451 b46ace3bd300669bca110c4f13359cd7 90 SUPERFAMILY SSF54975 3 89 2.62E-19 T 18-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SHALO_1451 b46ace3bd300669bca110c4f13359cd7 90 Gene3D G3DSA:3.30.70.100 1 89 7.0E-21 T 18-10-2018 SHALO_0926 d9d1d501065afd8134315fa7df488978 201 Pfam PF09335 SNARE associated Golgi protein 45 161 3.2E-29 T 18-10-2018 IPR032816 SNARE associated Golgi protein SHALO_2829 4354dace230254d3ff22af557b8898c2 210 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 12 175 4.2E-34 T 18-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal SHALO_2829 4354dace230254d3ff22af557b8898c2 210 PIRSF PIRSF000013 7 188 4.3E-14 T 18-10-2018 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 SHALO_2829 4354dace230254d3ff22af557b8898c2 210 Gene3D G3DSA:1.10.3820.10 8 184 5.0E-31 T 18-10-2018 IPR038266 NapC/NirT cytochrome c superfamily SHALO_2829 4354dace230254d3ff22af557b8898c2 210 SUPERFAMILY SSF48695 29 174 1.47E-19 T 18-10-2018 IPR036280 Multiheme cytochrome superfamily SHALO_0958 ac185346df60d016f02fb538ee4cd502 165 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 39 - T 18-10-2018 IPR010916 TonB box, conserved site SHALO_2717 8d5745d7eada7a5847ac74c61788dcb7 705 SUPERFAMILY SSF82866 565 697 6.28E-6 T 18-10-2018 SHALO_2717 8d5745d7eada7a5847ac74c61788dcb7 705 SUPERFAMILY SSF82866 210 360 1.12E-11 T 18-10-2018 SHALO_1859 4066a11daeb23010672f941322d805da 170 Pfam PF01292 Prokaryotic cytochrome b561 3 169 3.3E-17 T 18-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 SHALO_1859 4066a11daeb23010672f941322d805da 170 SUPERFAMILY SSF81342 2 169 2.51E-16 T 18-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 SHALO_0441 0b76095c8f843d8f483e31022e1a93f0 613 Pfam PF05787 Bacterial protein of unknown function (DUF839) 171 558 1.0E-20 T 18-10-2018 IPR008557 Protein of unknown function DUF839 SHALO_2140 58f03dabc0600711edc8dc75d955d6c2 117 Pfam PF07450 Formate hydrogenlyase maturation protein HycH 2 92 5.6E-11 T 18-10-2018 IPR010005 Formate hydrogenlyase maturation HycH SHALO_2140 58f03dabc0600711edc8dc75d955d6c2 117 ProDom PD021295 MATURATION HYDROGENLYASE FORMATE HYCH LYASE HYCE PROCESSING OXIDOREDUCTASE J COMPONENT 2 88 4.0E-5 T 18-10-2018 IPR010005 Formate hydrogenlyase maturation HycH SHALO_0152 44019b9f8badf011e46d91c4d9c86958 396 Gene3D G3DSA:1.20.1250.20 8 388 1.3E-23 T 18-10-2018 SHALO_0152 44019b9f8badf011e46d91c4d9c86958 396 SUPERFAMILY SSF103473 10 389 3.4E-27 T 18-10-2018 IPR036259 MFS transporter superfamily SHALO_0152 44019b9f8badf011e46d91c4d9c86958 396 Pfam PF07690 Major Facilitator Superfamily 18 352 4.3E-17 T 18-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SHALO_1089 332a470c006103306b0c510c866aefda 283 Hamap MF_00188 Protease HtpX [htpX]. 3 278 27.988 T 18-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 SHALO_1089 332a470c006103306b0c510c866aefda 283 Gene3D G3DSA:3.30.2010.10 58 148 2.7E-30 T 18-10-2018 SHALO_1089 332a470c006103306b0c510c866aefda 283 Pfam PF01435 Peptidase family M48 72 278 6.0E-39 T 18-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 SHALO_1647 c14a23a801f1d885f5ba7a4e915c6ef8 536 SUPERFAMILY SSF50182 315 395 4.25E-7 T 18-10-2018 IPR010920 LSM domain superfamily SHALO_1647 c14a23a801f1d885f5ba7a4e915c6ef8 536 Pfam PF00924 Mechanosensitive ion channel 271 464 4.0E-37 T 18-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 SHALO_2265 fd5a31dcb3e0444cfa8341b0fcbc54e0 163 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 27 158 4.4E-23 T 18-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ SHALO_1588 7526eeaaebe7ba600ab1e1791991a19e 337 SMART SM00450 3 133 4.1E-7 T 18-10-2018 IPR001763 Rhodanese-like domain SHALO_1588 7526eeaaebe7ba600ab1e1791991a19e 337 SUPERFAMILY SSF52821 18 151 3.54E-19 T 18-10-2018 IPR036873 Rhodanese-like domain superfamily SHALO_1588 7526eeaaebe7ba600ab1e1791991a19e 337 Pfam PF00581 Rhodanese-like domain 18 128 1.7E-7 T 18-10-2018 IPR001763 Rhodanese-like domain SHALO_1588 7526eeaaebe7ba600ab1e1791991a19e 337 TIGRFAM TIGR03167 tRNA_sel_U_synt: tRNA 2-selenouridine synthase 17 312 1.0E-93 T 18-10-2018 IPR017582 tRNA 2-selenouridine/geranyl-2-thiouridine synthase GO:0016785|GO:0043828|GO:0070329 SHALO_1588 7526eeaaebe7ba600ab1e1791991a19e 337 Gene3D G3DSA:3.40.250.10 7 134 6.3E-34 T 18-10-2018 IPR036873 Rhodanese-like domain superfamily SHALO_1588 7526eeaaebe7ba600ab1e1791991a19e 337 SUPERFAMILY SSF52540 140 296 4.82E-5 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_2943 d93c54dfb7f567ad5f2d05db595180ec 207 Pfam PF13649 Methyltransferase domain 37 128 1.0E-8 T 18-10-2018 SHALO_2943 d93c54dfb7f567ad5f2d05db595180ec 207 Gene3D G3DSA:3.40.50.150 4 205 7.6E-33 T 18-10-2018 SHALO_2943 d93c54dfb7f567ad5f2d05db595180ec 207 SUPERFAMILY SSF53335 3 165 1.66E-19 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_0770 fccfb1e457789dcec062f775b0e52ff6 717 Pfam PF04453 Organic solvent tolerance protein 306 668 4.8E-5 T 18-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 SHALO_0770 fccfb1e457789dcec062f775b0e52ff6 717 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 6 702 13.532 T 18-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 SHALO_2906 b11f6bdb91e34ac4913604ee525998cc 239 SUPERFAMILY SSF64518 9 231 4.32E-18 T 18-10-2018 SHALO_2906 b11f6bdb91e34ac4913604ee525998cc 239 Gene3D G3DSA:1.20.1330.10 39 226 2.4E-22 T 18-10-2018 SHALO_2906 b11f6bdb91e34ac4913604ee525998cc 239 Pfam PF00669 Bacterial flagellin N-terminal helical region 37 135 1.1E-13 T 18-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SHALO_1051 cf915d77a279f800f25a45dd862a5fbf 317 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 60 275 1.4E-15 T 18-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 SHALO_1051 cf915d77a279f800f25a45dd862a5fbf 317 Gene3D G3DSA:3.40.630.10 9 310 1.9E-39 T 18-10-2018 SHALO_1051 cf915d77a279f800f25a45dd862a5fbf 317 SUPERFAMILY SSF53187 30 302 1.76E-15 T 18-10-2018 SHALO_0352 fd8f3146cdb3c8f4e6b191531163a9bd 161 Pfam PF00034 Cytochrome c 85 137 7.5E-5 T 18-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_0352 fd8f3146cdb3c8f4e6b191531163a9bd 161 SUPERFAMILY SSF46626 84 147 8.45E-12 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_0352 fd8f3146cdb3c8f4e6b191531163a9bd 161 Gene3D G3DSA:1.10.760.10 82 149 4.3E-12 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_1775 7c90c4634b0dd7a92faf4a4b8b2412d5 122 SUPERFAMILY SSF53146 1 122 2.22E-23 T 18-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily SHALO_1775 7c90c4634b0dd7a92faf4a4b8b2412d5 122 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 19 105 8.7E-13 T 18-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis SHALO_1775 7c90c4634b0dd7a92faf4a4b8b2412d5 122 Gene3D G3DSA:3.30.420.130 1 108 1.6E-19 T 18-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily SHALO_2139 5e27c2ff95b48c43bd6dce4f83c8cc2d 274 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 40 149 7.0E-26 T 18-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_2139 5e27c2ff95b48c43bd6dce4f83c8cc2d 274 SUPERFAMILY SSF56770 28 159 1.2E-52 T 18-10-2018 SHALO_2139 5e27c2ff95b48c43bd6dce4f83c8cc2d 274 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 123 139 - T 18-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_2139 5e27c2ff95b48c43bd6dce4f83c8cc2d 274 Gene3D G3DSA:3.40.50.12280 4 174 5.7E-52 T 18-10-2018 SHALO_2940 988616b2effb077d18284153cc50e990 248 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 137 246 8.8E-12 T 18-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 SHALO_2940 988616b2effb077d18284153cc50e990 248 Gene3D G3DSA:3.30.1380.10 105 248 9.4E-8 T 18-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 SHALO_1693 8cec9258c4e8e6468c8b259c072325a3 290 PIRSF PIRSF006278 5 172 1.4E-11 T 18-10-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase SHALO_1693 8cec9258c4e8e6468c8b259c072325a3 290 PIRSF PIRSF006278 209 288 35.0 T 18-10-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase SHALO_1693 8cec9258c4e8e6468c8b259c072325a3 290 Gene3D G3DSA:3.40.50.1100 33 129 1.5E-13 T 18-10-2018 SHALO_1693 8cec9258c4e8e6468c8b259c072325a3 290 SUPERFAMILY SSF53686 13 284 3.05E-36 T 18-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme SHALO_1693 8cec9258c4e8e6468c8b259c072325a3 290 Gene3D G3DSA:3.40.50.1100 16 258 1.5E-13 T 18-10-2018 SHALO_0039 bab4d8b28255dd95d5641df3172bd13e 144 SUPERFAMILY SSF55729 1 135 3.66E-23 T 18-10-2018 IPR016181 Acyl-CoA N-acyltransferase SHALO_0039 bab4d8b28255dd95d5641df3172bd13e 144 Gene3D G3DSA:3.40.630.30 1 137 4.5E-25 T 18-10-2018 SHALO_0039 bab4d8b28255dd95d5641df3172bd13e 144 Pfam PF00583 Acetyltransferase (GNAT) family 41 131 2.3E-14 T 18-10-2018 IPR000182 GNAT domain SHALO_2801 5a91c8a6ca404d51bfe5d8579d77915d 132 Pfam PF01527 Transposase 7 82 1.1E-5 T 18-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SHALO_2801 5a91c8a6ca404d51bfe5d8579d77915d 132 SUPERFAMILY SSF46689 6 80 4.66E-7 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SHALO_2905 35df73722de309578efee0bf7d5a2ed1 195 SUPERFAMILY SSF53335 4 144 2.37E-16 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_2905 35df73722de309578efee0bf7d5a2ed1 195 Pfam PF13649 Methyltransferase domain 52 141 6.7E-7 T 18-10-2018 SHALO_2905 35df73722de309578efee0bf7d5a2ed1 195 Gene3D G3DSA:3.40.50.150 6 181 9.2E-15 T 18-10-2018 SHALO_2443 b5e4cfd94c066bbe360dc0ea64bc986e 500 Pfam PF04945 YHS domain 435 481 2.2E-7 T 18-10-2018 IPR007029 YHS domain SHALO_2443 b5e4cfd94c066bbe360dc0ea64bc986e 500 Pfam PF10080 Predicted membrane protein (DUF2318) 326 427 3.0E-28 T 18-10-2018 IPR018758 Domain of unknown function DUF2318, membrane SHALO_1009 2d2cc030b0d7f8e2aa2a3d91c5439432 287 Pfam PF14297 Domain of unknown function (DUF4373) 10 94 8.4E-17 T 18-10-2018 IPR025400 Domain of unknown function DUF4373 SHALO_0183 3eef292d45d0e42f4584b8b68adaafe1 169 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 16 156 6.3E-75 T 18-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0183 3eef292d45d0e42f4584b8b68adaafe1 169 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 12 155 42.586 T 18-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0183 3eef292d45d0e42f4584b8b68adaafe1 169 Gene3D G3DSA:3.40.50.12280 2 168 2.4E-74 T 18-10-2018 SHALO_0183 3eef292d45d0e42f4584b8b68adaafe1 169 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 42 148 1.9E-23 T 18-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0183 3eef292d45d0e42f4584b8b68adaafe1 169 SUPERFAMILY SSF56770 16 159 2.22E-65 T 18-10-2018 SHALO_1305 a9b029111fb68617f677952f4313bf74 157 Gene3D G3DSA:3.10.50.40 3 156 3.8E-41 T 18-10-2018 SHALO_1305 a9b029111fb68617f677952f4313bf74 157 Gene3D G3DSA:2.40.10.330 70 125 3.8E-41 T 18-10-2018 SHALO_1305 a9b029111fb68617f677952f4313bf74 157 SUPERFAMILY SSF54534 3 144 1.04E-23 T 18-10-2018 SHALO_0136 3df73bc07044cf05c7ab64c16fc2292d 121 Pfam PF01219 Prokaryotic diacylglycerol kinase 15 114 3.0E-27 T 18-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 SHALO_0136 3df73bc07044cf05c7ab64c16fc2292d 121 Gene3D G3DSA:1.10.3830.10 2 119 2.3E-30 T 18-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 SHALO_1849 683c2a202e578c66e6a4a0b1a2bae828 433 SUPERFAMILY SSF56801 46 398 1.11E-32 T 18-10-2018 SHALO_1849 683c2a202e578c66e6a4a0b1a2bae828 433 Pfam PF00501 AMP-binding enzyme 87 289 2.1E-11 T 18-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 SHALO_1849 683c2a202e578c66e6a4a0b1a2bae828 433 Gene3D G3DSA:3.40.50.12780 7 331 9.8E-77 T 18-10-2018 SHALO_0995 448ba4400ca0174058114d0ecb1fa39f 194 Gene3D G3DSA:3.40.50.360 1 193 1.7E-58 T 18-10-2018 IPR029039 Flavoprotein-like superfamily SHALO_0995 448ba4400ca0174058114d0ecb1fa39f 194 SUPERFAMILY SSF52218 1 194 4.01E-57 T 18-10-2018 IPR029039 Flavoprotein-like superfamily SHALO_0995 448ba4400ca0174058114d0ecb1fa39f 194 Pfam PF02525 Flavodoxin-like fold 1 184 1.1E-49 T 18-10-2018 IPR003680 Flavodoxin-like fold SHALO_1590 a015cb24ea1599e67f1e1dd9df7e7e2f 207 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 2 194 1.4E-48 T 18-10-2018 IPR002751 Metal transport protein CbiM/NikMN GO:0000041|GO:0016021 SHALO_1590 a015cb24ea1599e67f1e1dd9df7e7e2f 207 Gene3D G3DSA:1.10.1760.20 1 194 6.4E-41 T 18-10-2018 SHALO_1007 8405518361e078571f4bd6c0d5730974 402 SUPERFAMILY SSF56349 91 379 3.24E-37 T 18-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SHALO_1007 8405518361e078571f4bd6c0d5730974 402 Gene3D G3DSA:1.10.150.130 56 179 1.0E-11 T 18-10-2018 IPR010998 Integrase/recombinase, N-terminal SHALO_1007 8405518361e078571f4bd6c0d5730974 402 Pfam PF00589 Phage integrase family 186 374 2.3E-12 T 18-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SHALO_1007 8405518361e078571f4bd6c0d5730974 402 Gene3D G3DSA:1.10.443.10 180 387 1.9E-26 T 18-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 SHALO_2473 97f6828b50dd813baa8ffbce3ff7b082 144 Gene3D G3DSA:2.40.33.20 13 144 1.3E-14 T 18-10-2018 SHALO_2473 97f6828b50dd813baa8ffbce3ff7b082 144 SUPERFAMILY SSF50800 16 144 2.35E-17 T 18-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily SHALO_2181 47f96a6996eb3a05f353b4b625f7ce4d 202 Pfam PF01810 LysE type translocator 16 199 7.1E-29 T 18-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 SHALO_0297 ae5894a65c58e5dbeeea2956ea1d6b60 104 SUPERFAMILY SSF140663 6 70 6.93E-9 T 18-10-2018 IPR023203 TTHA0068-like superfamily SHALO_0297 ae5894a65c58e5dbeeea2956ea1d6b60 104 Pfam PF03745 Domain of unknown function (DUF309) 5 67 2.3E-13 T 18-10-2018 IPR005500 Protein of unknown function DUF309 SHALO_0297 ae5894a65c58e5dbeeea2956ea1d6b60 104 Gene3D G3DSA:1.10.3450.10 3 84 3.5E-6 T 18-10-2018 SHALO_1297 df1cf561e29c4f5d481380ac57f156e3 138 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 16 127 6.1E-22 T 18-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_1297 df1cf561e29c4f5d481380ac57f156e3 138 SUPERFAMILY SSF56770 6 135 7.85E-38 T 18-10-2018 SHALO_1297 df1cf561e29c4f5d481380ac57f156e3 138 Gene3D G3DSA:3.40.50.12280 3 138 2.3E-35 T 18-10-2018 SHALO_1260 2b67e1b29beec4a531bab35093bbe64a 546 Gene3D G3DSA:3.40.190.10 52 274 4.1E-50 T 18-10-2018 SHALO_1260 2b67e1b29beec4a531bab35093bbe64a 546 SUPERFAMILY SSF53850 35 513 9.77E-56 T 18-10-2018 SHALO_1260 2b67e1b29beec4a531bab35093bbe64a 546 PIRSF PIRSF002741 373 517 49.0 T 18-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 SHALO_1260 2b67e1b29beec4a531bab35093bbe64a 546 PIRSF PIRSF002741 18 347 8.3E-38 T 18-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 SHALO_1260 2b67e1b29beec4a531bab35093bbe64a 546 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 83 440 2.9E-41 T 18-10-2018 IPR000914 Solute-binding protein family 5 domain SHALO_1260 2b67e1b29beec4a531bab35093bbe64a 546 Gene3D G3DSA:3.10.105.10 275 441 4.1E-50 T 18-10-2018 SHALO_2160 50cc6d7c3aa7f83e450587362b16bada 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 30 212 7.4E-14 T 18-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 SHALO_2160 50cc6d7c3aa7f83e450587362b16bada 225 Gene3D G3DSA:1.10.3720.10 2 224 1.3E-47 T 18-10-2018 IPR035906 MetI-like superfamily SHALO_2160 50cc6d7c3aa7f83e450587362b16bada 225 SUPERFAMILY SSF161098 7 219 6.67E-43 T 18-10-2018 IPR035906 MetI-like superfamily SHALO_2160 50cc6d7c3aa7f83e450587362b16bada 225 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 14 220 9.2E-57 T 18-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 SHALO_0240 4f33b812d6bd2b81a301ca82eba984fa 214 SUPERFAMILY SSF69572 2 213 5.76E-39 T 18-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 SHALO_0240 4f33b812d6bd2b81a301ca82eba984fa 214 Gene3D G3DSA:3.40.50.720 1 214 2.8E-48 T 18-10-2018 SHALO_0240 4f33b812d6bd2b81a301ca82eba984fa 214 Pfam PF00899 ThiF family 6 129 1.8E-23 T 18-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 SHALO_1342 81672fa065bd21a914804fadcf5d78e0 243 Pfam PF13566 Domain of unknown function (DUF4130 82 240 1.2E-36 T 18-10-2018 IPR025404 Domain of unknown function DUF4130 SHALO_1342 81672fa065bd21a914804fadcf5d78e0 243 TIGRFAM TIGR03915 SAM_7_link_chp: probable DNA metabolism protein 3 241 4.4E-62 T 18-10-2018 IPR023875 DNA metabolism protein, putative SHALO_0541 aa57e80bb29491031f963b85b019485d 272 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 13 263 1.9E-66 T 18-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 SHALO_0541 aa57e80bb29491031f963b85b019485d 272 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 4 268 7.8E-71 T 18-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 SHALO_0541 aa57e80bb29491031f963b85b019485d 272 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 269 18.501 T 18-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 SHALO_0541 aa57e80bb29491031f963b85b019485d 272 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 151 163 - T 18-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 SHALO_2285 36a2b6e2a71685fb8b7985d70e1cf887 269 Pfam PF01061 ABC-2 type transporter 22 227 1.5E-24 T 18-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 SHALO_2901 bbdfe4ba22dba6cb49d555fafe587576 212 Gene3D G3DSA:3.40.630.30 1 158 4.0E-29 T 18-10-2018 SHALO_2901 bbdfe4ba22dba6cb49d555fafe587576 212 Pfam PF00583 Acetyltransferase (GNAT) family 21 121 1.7E-9 T 18-10-2018 IPR000182 GNAT domain SHALO_2901 bbdfe4ba22dba6cb49d555fafe587576 212 SUPERFAMILY SSF55729 12 146 1.26E-17 T 18-10-2018 IPR016181 Acyl-CoA N-acyltransferase SHALO_0619 54ab99bb928701cc994ab9c52debf153 187 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 28 156 1.3E-30 T 18-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ SHALO_0172 d074b2097a9ed6726469ca748523c825 301 SUPERFAMILY SSF103481 203 288 5.89E-10 T 18-10-2018 SHALO_0172 d074b2097a9ed6726469ca748523c825 301 SUPERFAMILY SSF103481 44 143 1.44E-11 T 18-10-2018 SHALO_0172 d074b2097a9ed6726469ca748523c825 301 Pfam PF00892 EamA-like transporter family 11 140 1.2E-16 T 18-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 SHALO_0172 d074b2097a9ed6726469ca748523c825 301 Pfam PF00892 EamA-like transporter family 149 283 4.3E-16 T 18-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 SHALO_2733 d4f452e720864cff639ca2be79251121 362 Pfam PF01841 Transglutaminase-like superfamily 153 275 1.6E-23 T 18-10-2018 IPR002931 Transglutaminase-like SHALO_2733 d4f452e720864cff639ca2be79251121 362 SUPERFAMILY SSF54001 128 276 8.97E-26 T 18-10-2018 IPR038765 Papain-like cysteine peptidase superfamily SHALO_2733 d4f452e720864cff639ca2be79251121 362 Gene3D G3DSA:3.10.620.30 105 290 4.0E-24 T 18-10-2018 SHALO_2733 d4f452e720864cff639ca2be79251121 362 SMART SM00460 199 277 1.5E-12 T 18-10-2018 IPR002931 Transglutaminase-like SHALO_0492 e4a626169c0541cf07184d49581b7ceb 450 Pfam PF01554 MatE 21 181 9.5E-26 T 18-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 SHALO_0492 e4a626169c0541cf07184d49581b7ceb 450 Pfam PF01554 MatE 248 400 9.8E-26 T 18-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 SHALO_0492 e4a626169c0541cf07184d49581b7ceb 450 TIGRFAM TIGR00797 matE: MATE efflux family protein 23 420 5.0E-59 T 18-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 SHALO_0492 e4a626169c0541cf07184d49581b7ceb 450 PIRSF PIRSF006603 1 447 1.5E-96 T 18-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 SHALO_2796 627d23c512cf5ac64cd8b1731c0f5ec4 276 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 1 266 7.2E-15 T 18-10-2018 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 SHALO_2974 dfd8f35a880945696dc0a35b0a6c9c04 183 Gene3D G3DSA:1.10.3480.10 1 179 1.1E-31 T 18-10-2018 SHALO_2974 dfd8f35a880945696dc0a35b0a6c9c04 183 SUPERFAMILY SSF89155 4 182 3.53E-30 T 18-10-2018 IPR036411 TorD-like superfamily SHALO_2974 dfd8f35a880945696dc0a35b0a6c9c04 183 Pfam PF02613 Nitrate reductase delta subunit 53 149 2.3E-13 T 18-10-2018 IPR020945 DMSO/Nitrate reductase chaperone SHALO_2307 f6ea5ae7cdd744500c745f0b482e5929 150 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 18 146 4.6E-43 T 18-10-2018 IPR003791 Protein of unknown function UPF0178 SHALO_2307 f6ea5ae7cdd744500c745f0b482e5929 150 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 28.987 T 18-10-2018 IPR003791 Protein of unknown function UPF0178 SHALO_1832 f647aad6c8b0c4ed13f10bc650638086 93 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 29 90 2.1E-6 T 18-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain SHALO_1975 b94773a95499cb4a6e47a08638e63aac 420 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 173 347 3.5E-10 T 18-10-2018 IPR004477 ComEC/Rec2-related protein SHALO_1975 b94773a95499cb4a6e47a08638e63aac 420 Pfam PF03772 Competence protein 160 417 1.7E-23 T 18-10-2018 IPR004477 ComEC/Rec2-related protein SHALO_2531 9152fea19c4ddd2b4f3d276b4e9b4e70 186 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 1 180 21.714 T 18-10-2018 IPR022929 Putative manganese efflux pump MntP SHALO_2531 9152fea19c4ddd2b4f3d276b4e9b4e70 186 Pfam PF02659 Putative manganese efflux pump 32 177 2.0E-43 T 18-10-2018 IPR003810 Putative manganese efflux pump SHALO_2921 e83ce7e87be02e185ce8f74f20e79eb2 344 Gene3D G3DSA:3.90.25.10 195 319 9.0E-107 T 18-10-2018 SHALO_2921 e83ce7e87be02e185ce8f74f20e79eb2 344 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 312 1.5E-73 T 18-10-2018 IPR016040 NAD(P)-binding domain SHALO_2921 e83ce7e87be02e185ce8f74f20e79eb2 344 Gene3D G3DSA:3.40.50.720 4 311 9.0E-107 T 18-10-2018 SHALO_2921 e83ce7e87be02e185ce8f74f20e79eb2 344 SUPERFAMILY SSF51735 1 324 7.1E-89 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_1866 79a091cae2d0066db6dc6fb9e349e6e5 529 Pfam PF03929 PepSY-associated TM region 16 384 3.2E-31 T 18-10-2018 IPR005625 PepSY-associated TM protein SHALO_0282 1811af40479156cc71a30acde2c3aa92 208 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 6 207 3.7E-55 T 18-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 SHALO_0282 1811af40479156cc71a30acde2c3aa92 208 SMART SM01207 13 200 7.4E-75 T 18-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 SHALO_0282 1811af40479156cc71a30acde2c3aa92 208 Pfam PF02660 Glycerol-3-phosphate acyltransferase 14 199 5.1E-45 T 18-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 SHALO_0282 1811af40479156cc71a30acde2c3aa92 208 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 10 208 19.017 T 18-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 SHALO_1314 18eef81fdb1214a1f12f7eec6ce6591d 276 Pfam PF13289 SIR2-like domain 107 262 1.9E-6 T 18-10-2018 IPR039444 SIR2-like domain SHALO_1431 a7120cffb05c0a96387b9793954aef26 165 Gene3D G3DSA:3.40.30.10 83 151 4.8E-7 T 18-10-2018 SHALO_1431 a7120cffb05c0a96387b9793954aef26 165 SUPERFAMILY SSF52833 7 135 7.7E-6 T 18-10-2018 IPR036249 Thioredoxin-like superfamily SHALO_1528 fbff03d05cce54c38866b96888fecaad 252 Pfam PF02571 Precorrin-6x reductase CbiJ/CobK 2 246 2.4E-67 T 18-10-2018 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 SHALO_1528 fbff03d05cce54c38866b96888fecaad 252 TIGRFAM TIGR00715 precor6x_red: precorrin-6x reductase 2 244 1.8E-59 T 18-10-2018 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 SHALO_2971 2e39a6b0ad917a6412fb3e1bfb03cd52 169 Pfam PF14358 Domain of unknown function (DUF4405) 8 59 6.8E-8 T 18-10-2018 IPR025517 Domain of unknown function DUF4405 SHALO_1461 a300b86b4130fe20a61e8c4f25919b4b 269 Pfam PF13401 AAA domain 43 155 4.3E-8 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_1461 a300b86b4130fe20a61e8c4f25919b4b 269 Gene3D G3DSA:3.40.50.300 28 172 1.5E-12 T 18-10-2018 SHALO_1461 a300b86b4130fe20a61e8c4f25919b4b 269 SMART SM00382 40 177 2.6E-5 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_1461 a300b86b4130fe20a61e8c4f25919b4b 269 SUPERFAMILY SSF52540 38 239 4.51E-22 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0831 217ee3831fb4d02ff5c8d9cb73becf84 132 Pfam PF08447 PAS fold 26 103 1.6E-15 T 18-10-2018 IPR013655 PAS fold-3 GO:0005515 SHALO_0831 217ee3831fb4d02ff5c8d9cb73becf84 132 Gene3D G3DSA:3.30.450.20 6 127 4.1E-20 T 18-10-2018 SHALO_0831 217ee3831fb4d02ff5c8d9cb73becf84 132 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 16 98 9.9E-9 T 18-10-2018 IPR000014 PAS domain SHALO_0831 217ee3831fb4d02ff5c8d9cb73becf84 132 SUPERFAMILY SSF55785 14 98 4.03E-24 T 18-10-2018 IPR035965 PAS domain superfamily SHALO_1945 475ad232de84368ad8a2d318340d3096 224 Pfam PF03591 AzlC protein 12 150 1.9E-41 T 18-10-2018 IPR011606 Branched-chain amino acid transport, permease SHALO_0213 241642302483d2a775c9af15b1ba2202 403 Gene3D G3DSA:3.40.640.10 67 297 2.0E-122 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 SHALO_0213 241642302483d2a775c9af15b1ba2202 403 Pfam PF00155 Aminotransferase class I and II 34 391 7.7E-64 T 18-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SHALO_0213 241642302483d2a775c9af15b1ba2202 403 Gene3D G3DSA:3.90.1150.10 298 395 2.0E-122 T 18-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 SHALO_0213 241642302483d2a775c9af15b1ba2202 403 SUPERFAMILY SSF53383 7 400 5.56E-106 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase SHALO_1569 8f96551b1b9d4b07f64ef67c060966b3 403 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 42 55 - T 18-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 SHALO_1569 8f96551b1b9d4b07f64ef67c060966b3 403 Gene3D G3DSA:3.40.50.1100 50 146 3.9E-119 T 18-10-2018 SHALO_1569 8f96551b1b9d4b07f64ef67c060966b3 403 Gene3D G3DSA:3.40.50.1100 7 309 3.9E-119 T 18-10-2018 SHALO_1569 8f96551b1b9d4b07f64ef67c060966b3 403 SUPERFAMILY SSF53686 4 354 1.24E-97 T 18-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme SHALO_1569 8f96551b1b9d4b07f64ef67c060966b3 403 TIGRFAM TIGR01127 ilvA_1Cterm: threonine ammonia-lyase 21 400 3.3E-159 T 18-10-2018 IPR005789 Threonine dehydratase, catabolic GO:0004794|GO:0006567 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 SHALO_1569 8f96551b1b9d4b07f64ef67c060966b3 403 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 16 304 1.4E-80 T 18-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme SHALO_0139 f7883632ae169368136dbd9d2e3cbf6f 445 SUPERFAMILY SSF46626 262 444 1.49E-9 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_0139 f7883632ae169368136dbd9d2e3cbf6f 445 Gene3D G3DSA:1.10.760.10 351 445 1.9E-5 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_0849 34475cb3df8804b2d0110e71322c667b 239 Pfam PF00696 Amino acid kinase family 5 215 3.7E-33 T 18-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 SHALO_0849 34475cb3df8804b2d0110e71322c667b 239 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 5 232 3.3E-95 T 18-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 SHALO_0849 34475cb3df8804b2d0110e71322c667b 239 SUPERFAMILY SSF53633 3 230 1.03E-65 T 18-10-2018 IPR036393 Acetylglutamate kinase-like superfamily SHALO_0849 34475cb3df8804b2d0110e71322c667b 239 Gene3D G3DSA:3.40.1160.10 1 237 2.1E-74 T 18-10-2018 IPR036393 Acetylglutamate kinase-like superfamily SHALO_0849 34475cb3df8804b2d0110e71322c667b 239 Hamap MF_01220_B Uridylate kinase [pyrH]. 2 237 41.841 T 18-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 SHALO_0849 34475cb3df8804b2d0110e71322c667b 239 PIRSF PIRSF005650 1 238 1.9E-87 T 18-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 SHALO_0730 9b356f7ecc4ef343184e0af0fb700be9 322 Gene3D G3DSA:1.50.10.150 8 321 8.5E-88 T 18-10-2018 IPR038665 Voltage-dependent anion channel superfamily SHALO_0730 9b356f7ecc4ef343184e0af0fb700be9 322 Pfam PF03595 Voltage-dependent anion channel 15 310 4.9E-56 T 18-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 SHALO_1164 b056972dff6dd54e127664958850a3a3 204 Gene3D G3DSA:1.10.472.60 64 167 9.7E-17 T 18-10-2018 SHALO_1164 b056972dff6dd54e127664958850a3a3 204 SUPERFAMILY SSF52833 26 180 7.61E-5 T 18-10-2018 IPR036249 Thioredoxin-like superfamily SHALO_2668 35a42d91081c73754a062e8869feb606 148 Pfam PF01618 MotA/TolQ/ExbB proton channel family 57 141 8.6E-32 T 18-10-2018 IPR002898 MotA/TolQ/ExbB proton channel SHALO_1818 88bc147709680554317415d6e983bbbe 253 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 5 222 1.1E-67 T 18-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SHALO_1818 88bc147709680554317415d6e983bbbe 253 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 99 125 2.6E-40 T 18-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SHALO_1818 88bc147709680554317415d6e983bbbe 253 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 81 99 2.6E-40 T 18-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SHALO_1818 88bc147709680554317415d6e983bbbe 253 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 150 178 2.6E-40 T 18-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SHALO_1818 88bc147709680554317415d6e983bbbe 253 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 4 31 2.6E-40 T 18-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SHALO_1818 88bc147709680554317415d6e983bbbe 253 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 3 240 16.913 T 18-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SHALO_1818 88bc147709680554317415d6e983bbbe 253 Pfam PF00902 Sec-independent protein translocase protein (TatC) 8 217 8.9E-69 T 18-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SHALO_2542 ebdf5d9d3decbe1dc36c232735c5a93f 247 Pfam PF00563 EAL domain 21 236 4.5E-33 T 18-10-2018 IPR001633 EAL domain SHALO_2542 ebdf5d9d3decbe1dc36c232735c5a93f 247 SUPERFAMILY SSF141868 15 237 8.37E-40 T 18-10-2018 IPR035919 EAL domain superfamily SHALO_2542 ebdf5d9d3decbe1dc36c232735c5a93f 247 SMART SM00052 9 243 5.0E-8 T 18-10-2018 IPR001633 EAL domain SHALO_2542 ebdf5d9d3decbe1dc36c232735c5a93f 247 Gene3D G3DSA:3.20.20.450 11 243 1.5E-37 T 18-10-2018 IPR035919 EAL domain superfamily SHALO_1019 1c43423ba74c53281e9c86897907ebd2 212 SUPERFAMILY SSF56349 36 204 1.09E-33 T 18-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SHALO_1019 1c43423ba74c53281e9c86897907ebd2 212 Pfam PF00589 Phage integrase family 37 195 2.0E-29 T 18-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SHALO_1019 1c43423ba74c53281e9c86897907ebd2 212 Gene3D G3DSA:1.10.443.10 30 211 1.5E-33 T 18-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 SHALO_1388 2acaeedd5d18eac24da787ee49d7efbd 272 Pfam PF01263 Aldose 1-epimerase 19 258 4.4E-36 T 18-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 SHALO_1388 2acaeedd5d18eac24da787ee49d7efbd 272 PIRSF PIRSF016020 2 269 1.3E-55 T 18-10-2018 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 SHALO_1388 2acaeedd5d18eac24da787ee49d7efbd 272 SUPERFAMILY SSF74650 17 266 7.77E-53 T 18-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 SHALO_1388 2acaeedd5d18eac24da787ee49d7efbd 272 Gene3D G3DSA:2.70.98.10 4 270 1.7E-72 T 18-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 SHALO_0823 f239f457aebd0825957b116e4883439a 126 Pfam PF01934 Protein of unknown function DUF86 15 117 3.9E-15 T 18-10-2018 IPR008201 Protein of unknown function DUF86 SHALO_0304 64688d382faf156f3edc62f381c27dee 115 Pfam PF11756 Nitrous oxide-stimulated promoter 5 104 2.5E-13 T 18-10-2018 IPR020483 Uncharacterised protein family YgbA SHALO_0304 64688d382faf156f3edc62f381c27dee 115 ProDom PD075772 YGBA ECS3588 CYTOPLASMIC UVRA STM2860 AMIDOPHOSPHORIBOSYLTRANSFERASE VVA0912 SO0324 VPA0976 CPE0229 51 104 5.0E-14 T 18-10-2018 IPR020483 Uncharacterised protein family YgbA SHALO_2385 7b7bdd857f15ab4fe2efe66a30855df5 69 TIGRFAM TIGR02736 cbb3_Q_epsi: cytochrome c oxidase, cbb3-type, CcoQ subunit 9 62 1.9E-25 T 18-10-2018 IPR014107 Cytochrome c oxidase cbb3-type, CcoQ SHALO_2385 7b7bdd857f15ab4fe2efe66a30855df5 69 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 2 51 1.6E-14 T 18-10-2018 IPR008621 Cbb3-type cytochrome oxidase component SHALO_0552 4bde16eae9b87f0179dc56378aae72ec 136 Gene3D G3DSA:1.20.120.160 6 133 1.3E-15 T 18-10-2018 IPR036641 HPT domain superfamily GO:0000160 SHALO_0552 4bde16eae9b87f0179dc56378aae72ec 136 SUPERFAMILY SSF47226 11 120 2.09E-17 T 18-10-2018 IPR036641 HPT domain superfamily GO:0000160 SHALO_0552 4bde16eae9b87f0179dc56378aae72ec 136 Pfam PF01627 Hpt domain 43 96 1.4E-5 T 18-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 SHALO_1963 a6e75303b9a19390a0b89711029faa41 75 Pfam PF04023 FeoA domain 3 73 6.0E-14 T 18-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 SHALO_1963 a6e75303b9a19390a0b89711029faa41 75 SUPERFAMILY SSF50037 4 73 2.04E-14 T 18-10-2018 IPR008988 Transcriptional repressor, C-terminal SHALO_1963 a6e75303b9a19390a0b89711029faa41 75 SMART SM00899 2 74 4.1E-15 T 18-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 SHALO_1963 a6e75303b9a19390a0b89711029faa41 75 Gene3D G3DSA:2.30.30.90 1 75 6.6E-18 T 18-10-2018 IPR038157 Ferrous iron transporter, core domain SHALO_2286 a02f7b635d1fc4a0f80e015086ac2b44 335 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 325 4.7E-93 T 18-10-2018 IPR016040 NAD(P)-binding domain SHALO_2286 a02f7b635d1fc4a0f80e015086ac2b44 335 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 3 333 2.8E-140 T 18-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 SHALO_2286 a02f7b635d1fc4a0f80e015086ac2b44 335 Gene3D G3DSA:3.40.50.720 3 325 1.9E-125 T 18-10-2018 SHALO_2286 a02f7b635d1fc4a0f80e015086ac2b44 335 Gene3D G3DSA:3.90.25.10 205 332 1.9E-125 T 18-10-2018 SHALO_2286 a02f7b635d1fc4a0f80e015086ac2b44 335 SUPERFAMILY SSF51735 3 334 5.72E-86 T 18-10-2018 IPR036291 NAD(P)-binding domain superfamily SHALO_2115 bbd3eb7ce20263f2f67e03406840f881 94 Pfam PF13613 Helix-turn-helix of DDE superfamily endonuclease 2 41 8.7E-10 T 18-10-2018 IPR027805 Transposase, Helix-turn-helix domain SHALO_2449 317fd26fb00f1b5a786b1f25c707fcd7 74 SUPERFAMILY SSF50037 3 73 1.01E-13 T 18-10-2018 IPR008988 Transcriptional repressor, C-terminal SHALO_2449 317fd26fb00f1b5a786b1f25c707fcd7 74 Pfam PF04023 FeoA domain 1 72 5.4E-13 T 18-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 SHALO_2449 317fd26fb00f1b5a786b1f25c707fcd7 74 SMART SM00899 1 73 1.6E-14 T 18-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 SHALO_2449 317fd26fb00f1b5a786b1f25c707fcd7 74 Gene3D G3DSA:2.30.30.90 1 74 3.4E-17 T 18-10-2018 IPR038157 Ferrous iron transporter, core domain SHALO_0789 11d684b199ff3ea4ab626266f2b65b6d 207 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 57 189 8.6E-24 T 18-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ SHALO_1804 e1c74a0da33b8dfe09eb11ec9c4dc7ef 606 Pfam PF02705 K+ potassium transporter 14 541 2.2E-155 T 18-10-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 SHALO_1275 6e9a97b78a37f3018a4a4b9fbfdfc6dc 162 Pfam PF13618 Gluconate 2-dehydrogenase subunit 3 31 145 7.1E-7 T 18-10-2018 IPR027056 Gluconate 2-dehydrogenase subunit 3 KEGG: 00030+1.1.99.3|MetaCyc: PWY-7165 SHALO_2833 831f9e3970e2a2a5687ada8cf57284a4 209 PIRSF PIRSF006324 4 209 7.2E-42 T 18-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 SHALO_2833 831f9e3970e2a2a5687ada8cf57284a4 209 Pfam PF01810 LysE type translocator 19 207 7.4E-22 T 18-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 SHALO_2959 5521a0901eda21454212dd3d7ff59e79 75 Pfam PF11127 Protein of unknown function (DUF2892) 1 59 3.4E-20 T 18-10-2018 IPR021309 Protein of unknown function DUF2892 SHALO_0910 f9a0cfb618103d776bec33e5ac6cd8a9 459 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 32 126 6.4E-19 T 18-10-2018 IPR029095 NarX-like, N-terminal SHALO_2025 2fa517f3962f90a4660b5276dae5b781 386 Gene3D G3DSA:3.90.1150.10 18 382 4.8E-116 T 18-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 SHALO_2025 2fa517f3962f90a4660b5276dae5b781 386 Pfam PF00155 Aminotransferase class I and II 51 378 6.1E-32 T 18-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SHALO_2025 2fa517f3962f90a4660b5276dae5b781 386 SUPERFAMILY SSF53383 3 385 2.23E-94 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase SHALO_2025 2fa517f3962f90a4660b5276dae5b781 386 Gene3D G3DSA:3.40.640.10 64 277 4.8E-116 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 SHALO_0093 88a7374ae87e95993064fd3ed1b57d7a 340 Pfam PF00268 Ribonucleotide reductase, small chain 30 305 2.8E-66 T 18-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 SHALO_0093 88a7374ae87e95993064fd3ed1b57d7a 340 Gene3D G3DSA:1.10.620.20 5 312 1.5E-87 T 18-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 SHALO_0093 88a7374ae87e95993064fd3ed1b57d7a 340 SUPERFAMILY SSF47240 14 336 1.43E-86 T 18-10-2018 IPR009078 Ferritin-like superfamily SHALO_0093 88a7374ae87e95993064fd3ed1b57d7a 340 PIRSF PIRSF000355 1 340 2.7E-112 T 18-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 SHALO_2244 68367a0d6b42980bfaf81d169821681c 295 Gene3D G3DSA:3.40.50.2000 117 295 8.2E-31 T 18-10-2018 SHALO_2244 68367a0d6b42980bfaf81d169821681c 295 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 124 265 5.5E-25 T 18-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 SHALO_2244 68367a0d6b42980bfaf81d169821681c 295 Gene3D G3DSA:3.40.50.2000 2 99 1.2E-5 T 18-10-2018 SHALO_2244 68367a0d6b42980bfaf81d169821681c 295 SUPERFAMILY SSF53756 1 287 1.13E-45 T 18-10-2018 SHALO_2806 ea8b35e1e57d3e3bb093e6cd7837c6b7 125 Pfam PF05610 Protein of unknown function (DUF779) 15 111 1.7E-36 T 18-10-2018 IPR008497 Protein of unknown function DUF779 SHALO_2806 ea8b35e1e57d3e3bb093e6cd7837c6b7 125 PIRSF PIRSF009151 1 125 1.2E-37 T 18-10-2018 IPR008497 Protein of unknown function DUF779 SHALO_2923 8ae38ec153e14bfee1fa4a6560e2ffe7 336 Pfam PF04055 Radical SAM superfamily 29 165 2.9E-9 T 18-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 SHALO_2923 8ae38ec153e14bfee1fa4a6560e2ffe7 336 SUPERFAMILY SSF102114 23 301 7.32E-40 T 18-10-2018 SHALO_2923 8ae38ec153e14bfee1fa4a6560e2ffe7 336 Pfam PF13186 Iron-sulfur cluster-binding domain 233 301 4.7E-13 T 18-10-2018 IPR023885 4Fe4S-binding SPASM domain SHALO_2923 8ae38ec153e14bfee1fa4a6560e2ffe7 336 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 233 301 5.5E-7 T 18-10-2018 IPR023885 4Fe4S-binding SPASM domain SHALO_1787 2248b6c8433adcb4bf6240dff4e8efe5 435 Pfam PF02646 RmuC family 111 407 1.9E-96 T 18-10-2018 IPR003798 DNA recombination RmuC SHALO_0203 ab0e451b711b21fa782a3a2aa92fb157 170 Pfam PF08447 PAS fold 30 114 4.6E-11 T 18-10-2018 IPR013655 PAS fold-3 GO:0005515 SHALO_0203 ab0e451b711b21fa782a3a2aa92fb157 170 SUPERFAMILY SSF55785 20 115 1.16E-21 T 18-10-2018 IPR035965 PAS domain superfamily SHALO_0203 ab0e451b711b21fa782a3a2aa92fb157 170 Gene3D G3DSA:3.30.450.20 10 119 3.5E-18 T 18-10-2018 SHALO_0203 ab0e451b711b21fa782a3a2aa92fb157 170 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 23 114 2.5E-9 T 18-10-2018 IPR000014 PAS domain SHALO_0655 451ad120516f8f5d8c620ca4ef1d2269 221 SUPERFAMILY SSF69572 4 210 3.92E-53 T 18-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 SHALO_0655 451ad120516f8f5d8c620ca4ef1d2269 221 Pfam PF00899 ThiF family 6 191 6.6E-40 T 18-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 SHALO_0655 451ad120516f8f5d8c620ca4ef1d2269 221 Gene3D G3DSA:3.40.50.720 1 216 3.3E-49 T 18-10-2018 SHALO_2240 42fd89f88cbee65eca6cd0c090b7303a 297 Pfam PF06258 Mitochondrial fission ELM1 12 281 2.9E-38 T 18-10-2018 IPR009367 Mitochondrial fission protein ELM1-like SHALO_2645 eb1e443189f62ac2392ea9a3b2c1355b 137 Gene3D G3DSA:1.10.10.10 1 137 1.5E-29 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_2645 eb1e443189f62ac2392ea9a3b2c1355b 137 SMART SM00347 26 126 6.8E-12 T 18-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SHALO_2645 eb1e443189f62ac2392ea9a3b2c1355b 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 67 82 3.0E-10 T 18-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SHALO_2645 eb1e443189f62ac2392ea9a3b2c1355b 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 116 136 3.0E-10 T 18-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SHALO_2645 eb1e443189f62ac2392ea9a3b2c1355b 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 102 3.0E-10 T 18-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SHALO_2645 eb1e443189f62ac2392ea9a3b2c1355b 137 SUPERFAMILY SSF46785 6 136 4.72E-27 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SHALO_2645 eb1e443189f62ac2392ea9a3b2c1355b 137 Pfam PF01047 MarR family 40 90 7.8E-8 T 18-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SHALO_0627 e3492ea89c94ff5fbd1c3292d73a1c45 71 Gene3D G3DSA:1.10.1220.10 1 64 3.1E-5 T 18-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 SHALO_0833 76a247cd7ab42df7d2dc0fc8338036fc 170 Gene3D G3DSA:1.10.8.1170 82 168 2.0E-5 T 18-10-2018 SHALO_2498 1b31000e3fc1d36df6ba464a557800eb 212 Pfam PF04012 PspA/IM30 family 6 149 9.0E-11 T 18-10-2018 IPR007157 PspA/IM30 SHALO_0038 6fe239eeedbed2c8ab0a57f3d33d2f0e 188 SUPERFAMILY SSF48498 87 184 1.81E-16 T 18-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily SHALO_0038 6fe239eeedbed2c8ab0a57f3d33d2f0e 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 4.6E-5 T 18-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SHALO_0038 6fe239eeedbed2c8ab0a57f3d33d2f0e 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 4.6E-5 T 18-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SHALO_0038 6fe239eeedbed2c8ab0a57f3d33d2f0e 188 Pfam PF16925 Bacterial transcriptional repressor C-terminal 81 173 5.0E-12 T 18-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal SHALO_0038 6fe239eeedbed2c8ab0a57f3d33d2f0e 188 Gene3D G3DSA:1.10.357.10 1 188 2.2E-37 T 18-10-2018 SHALO_0038 6fe239eeedbed2c8ab0a57f3d33d2f0e 188 ProSitePatterns PS01081 TetR-type HTH domain signature. 20 50 - T 18-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site SHALO_0038 6fe239eeedbed2c8ab0a57f3d33d2f0e 188 SUPERFAMILY SSF46689 3 68 1.33E-13 T 18-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SHALO_0038 6fe239eeedbed2c8ab0a57f3d33d2f0e 188 Pfam PF00440 Bacterial regulatory proteins, tetR family 9 53 5.5E-10 T 18-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SHALO_2005 d4ed03798beaff7e25c8d737937283f1 306 Pfam PF03547 Membrane transport protein 10 141 1.0E-14 T 18-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 SHALO_2005 d4ed03798beaff7e25c8d737937283f1 306 Pfam PF03547 Membrane transport protein 173 301 1.1E-6 T 18-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 SHALO_2005 d4ed03798beaff7e25c8d737937283f1 306 Gene3D G3DSA:1.20.1530.20 2 144 1.3E-6 T 18-10-2018 IPR038770 Sodium/solute symporter superfamily SHALO_2513 db486dcd0d5c1f15c928fa599a8583b9 519 Pfam PF03929 PepSY-associated TM region 13 370 1.5E-37 T 18-10-2018 IPR005625 PepSY-associated TM protein SHALO_2945 5504a35a48f3ea06d4b27974bbbed9e9 374 Gene3D G3DSA:3.60.21.10 148 327 2.3E-25 T 18-10-2018 IPR029052 Metallo-dependent phosphatase-like SHALO_2945 5504a35a48f3ea06d4b27974bbbed9e9 374 Pfam PF00149 Calcineurin-like phosphoesterase 151 313 2.4E-10 T 18-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 SHALO_2945 5504a35a48f3ea06d4b27974bbbed9e9 374 SUPERFAMILY SSF56300 152 369 4.88E-39 T 18-10-2018 SHALO_0221 1eb5af73a41c27a27937887319bb4b26 180 Pfam PF09624 Protein of unknown function (DUF2393) 20 180 6.9E-33 T 18-10-2018 IPR013417 Conserved hypothetical protein CHP02588 SHALO_2564 bec394d4e7403b9384980c22a4d107fc 113 SUPERFAMILY SSF52833 1 111 4.41E-24 T 18-10-2018 IPR036249 Thioredoxin-like superfamily SHALO_2564 bec394d4e7403b9384980c22a4d107fc 113 Gene3D G3DSA:3.40.30.10 1 113 8.5E-29 T 18-10-2018 SHALO_2564 bec394d4e7403b9384980c22a4d107fc 113 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 2 111 1.5E-24 T 18-10-2018 IPR006504 Transcriptional regulator Spx/MgsR SHALO_2564 bec394d4e7403b9384980c22a4d107fc 113 Pfam PF03960 ArsC family 49 110 1.4E-11 T 18-10-2018 IPR006660 Arsenate reductase-like SHALO_2134 4e3afede937d273a425cd75c9cd6703f 306 Pfam PF00146 NADH dehydrogenase 9 302 1.0E-48 T 18-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_0041 98f82bdbcf3115f68a81171308d433dd 204 Pfam PF13489 Methyltransferase domain 27 180 3.7E-18 T 18-10-2018 SHALO_0041 98f82bdbcf3115f68a81171308d433dd 204 SUPERFAMILY SSF53335 6 203 1.67E-34 T 18-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_0041 98f82bdbcf3115f68a81171308d433dd 204 Gene3D G3DSA:3.40.50.150 1 187 4.7E-30 T 18-10-2018 SHALO_1328 0921577ba7f28315da480a41490c5ef5 171 Pfam PF00210 Ferritin-like domain 19 159 1.0E-29 T 18-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 SHALO_1328 0921577ba7f28315da480a41490c5ef5 171 PIRSF PIRSF018063 1 163 2.0E-55 T 18-10-2018 IPR014490 DNA-binding protein from starved cells-like SHALO_1328 0921577ba7f28315da480a41490c5ef5 171 SUPERFAMILY SSF47240 14 160 2.12E-34 T 18-10-2018 IPR009078 Ferritin-like superfamily SHALO_1328 0921577ba7f28315da480a41490c5ef5 171 Gene3D G3DSA:1.20.1260.10 1 169 2.2E-55 T 18-10-2018 IPR012347 Ferritin-like SHALO_2526 be961e41dcf0356ba1714dd6f6845e9e 673 SUPERFAMILY SSF56935 26 673 4.03E-98 T 18-10-2018 SHALO_2526 be961e41dcf0356ba1714dd6f6845e9e 673 Pfam PF00593 TonB dependent receptor 276 672 5.5E-35 T 18-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel SHALO_2526 be961e41dcf0356ba1714dd6f6845e9e 673 Gene3D G3DSA:2.40.170.20 41 673 2.1E-110 T 18-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily SHALO_2526 be961e41dcf0356ba1714dd6f6845e9e 673 Pfam PF07715 TonB-dependent Receptor Plug Domain 48 159 4.8E-11 T 18-10-2018 IPR012910 TonB-dependent receptor, plug domain SHALO_0074 6e8420b768e589d66aa8b1f6987ef049 259 Gene3D G3DSA:3.40.50.300 1 204 3.6E-13 T 18-10-2018 SHALO_0074 6e8420b768e589d66aa8b1f6987ef049 259 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 93 2.9E-7 T 18-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain SHALO_0074 6e8420b768e589d66aa8b1f6987ef049 259 SUPERFAMILY SSF52540 1 164 1.31E-9 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0884 5e2269a99e2fa56ecd31ea9aafef204f 98 Pfam PF02325 YGGT family 17 84 1.8E-18 T 18-10-2018 IPR003425 CCB3/YggT GO:0016020 SHALO_1435 99b385d8d8ae0d4d11391b59fedc0597 218 Pfam PF08901 Protein of unknown function (DUF1847) 29 187 2.4E-65 T 18-10-2018 IPR014997 Protein of unknown function DUF1847 SHALO_1980 f57978a16dc68dfedc0931c32a74be4f 164 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 24 1.6E-6 T 18-10-2018 IPR012902 Prokaryotic N-terminal methylation site SHALO_1980 f57978a16dc68dfedc0931c32a74be4f 164 SUPERFAMILY SSF54523 5 108 2.83E-15 T 18-10-2018 SHALO_1980 f57978a16dc68dfedc0931c32a74be4f 164 Gene3D G3DSA:3.30.700.10 5 163 8.3E-17 T 18-10-2018 SHALO_1980 f57978a16dc68dfedc0931c32a74be4f 164 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 2 25 2.4E-8 T 18-10-2018 IPR012902 Prokaryotic N-terminal methylation site SHALO_1905 6c5ef39766f5317f69f766b636efd14f 262 Pfam PF00005 ABC transporter 19 175 7.5E-23 T 18-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_1905 6c5ef39766f5317f69f766b636efd14f 262 SUPERFAMILY SSF52540 3 238 1.64E-46 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_1905 6c5ef39766f5317f69f766b636efd14f 262 Gene3D G3DSA:3.40.50.300 1 259 4.9E-54 T 18-10-2018 SHALO_1905 6c5ef39766f5317f69f766b636efd14f 262 SMART SM00382 28 231 1.7E-7 T 18-10-2018 IPR003593 AAA+ ATPase domain SHALO_2691 735631a0bb1067439afa3c7d20b521a6 445 Hamap MF_00423 L-seryl-tRNA(Sec) selenium transferase [selA]. 1 445 170.849 T 18-10-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 SHALO_2691 735631a0bb1067439afa3c7d20b521a6 445 SUPERFAMILY SSF53383 69 428 2.55E-35 T 18-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase SHALO_2691 735631a0bb1067439afa3c7d20b521a6 445 TIGRFAM TIGR00474 selA: L-seryl-tRNA(Sec) selenium transferase 4 440 1.9E-156 T 18-10-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 SHALO_2691 735631a0bb1067439afa3c7d20b521a6 445 Gene3D G3DSA:3.90.1150.110 7 429 3.2E-148 T 18-10-2018 SHALO_2691 735631a0bb1067439afa3c7d20b521a6 445 Pfam PF03841 L-seryl-tRNA selenium transferase 74 427 2.3E-130 T 18-10-2018 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 SHALO_2691 735631a0bb1067439afa3c7d20b521a6 445 Gene3D G3DSA:3.40.640.10 86 348 3.2E-148 T 18-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 SHALO_1465 91eefb8755c8ec49ceea1cf17296f10a 508 Gene3D G3DSA:3.30.420.40 155 280 1.5E-6 T 18-10-2018 SHALO_1379 ddf5a1126c97dee8187a5e7bd80adc44 364 Gene3D G3DSA:3.20.20.300 20 355 1.0E-64 T 18-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 SHALO_1379 ddf5a1126c97dee8187a5e7bd80adc44 364 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 23 351 1.0E-48 T 18-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SHALO_1379 ddf5a1126c97dee8187a5e7bd80adc44 364 SUPERFAMILY SSF51445 28 357 1.68E-50 T 18-10-2018 IPR017853 Glycoside hydrolase superfamily SHALO_1286 dc75dda9658936e5d7ad05edd3fc9873 126 PIRSF PIRSF029543 2 126 5.4E-30 T 18-10-2018 IPR016924 Uncharacterised conserved protein UCP029543 SHALO_1232 6c479779ba48b4785a0c4141a4c7ca54 397 Pfam PF01618 MotA/TolQ/ExbB proton channel family 139 219 3.4E-6 T 18-10-2018 IPR002898 MotA/TolQ/ExbB proton channel SHALO_1075 6ec2f848d6db8e8ce8f59abfd5648cfe 218 Pfam PF03006 Haemolysin-III related 13 209 1.6E-34 T 18-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 SHALO_1075 6ec2f848d6db8e8ce8f59abfd5648cfe 218 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 16 215 1.3E-57 T 18-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 SHALO_2436 f16346d7cb1aefb3f8a1b4182edf3be1 192 Pfam PF00297 Ribosomal protein L3 95 161 2.3E-8 T 18-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_2436 f16346d7cb1aefb3f8a1b4182edf3be1 192 SUPERFAMILY SSF50447 5 185 9.71E-45 T 18-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily SHALO_2436 f16346d7cb1aefb3f8a1b4182edf3be1 192 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 185 1.1E-51 T 18-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_2436 f16346d7cb1aefb3f8a1b4182edf3be1 192 Gene3D G3DSA:2.40.30.10 119 189 7.2E-9 T 18-10-2018 SHALO_0694 73a783c1e990b734098f963ee8464187 250 Gene3D G3DSA:3.40.50.620 4 247 4.0E-45 T 18-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_0694 73a783c1e990b734098f963ee8464187 250 Pfam PF01171 PP-loop family 27 197 5.2E-22 T 18-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 SHALO_0694 73a783c1e990b734098f963ee8464187 250 SUPERFAMILY SSF52402 14 240 2.65E-44 T 18-10-2018 SHALO_0694 73a783c1e990b734098f963ee8464187 250 PIRSF PIRSF004976 3 247 8.9E-61 T 18-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 SHALO_2027 500996f7d19108344343b139b1f7a9f2 231 Pfam PF10670 Domain of unknown function (DUF4198) 26 207 7.3E-20 T 18-10-2018 IPR019613 Protein of unknown function DUF4198 SHALO_0264 eb5a682de0c99fa194d6e3e428df02f9 137 Pfam PF02108 Flagellar assembly protein FliH 16 130 9.2E-22 T 18-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE SHALO_0264 eb5a682de0c99fa194d6e3e428df02f9 137 SUPERFAMILY SSF160527 40 131 3.27E-5 T 18-10-2018 SHALO_0264 eb5a682de0c99fa194d6e3e428df02f9 137 Gene3D G3DSA:3.30.2320.30 53 137 1.7E-5 T 18-10-2018 IPR038495 V-type ATPase subunit E, C-terminal domain superfamily Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 SHALO_1666 731a4f57cc691c142a1210caa29f9a83 141 PIRSF PIRSF004638 1 141 3.7E-33 T 18-10-2018 IPR005265 Uncharacterised protein family UPF0093 SHALO_1666 731a4f57cc691c142a1210caa29f9a83 141 Pfam PF03653 Uncharacterised protein family (UPF0093) 2 141 5.0E-31 T 18-10-2018 IPR005265 Uncharacterised protein family UPF0093 SHALO_2617 1c077aa860e9e6fb87a6c79129dad510 370 Pfam PF02687 FtsX-like permease family 262 360 7.0E-10 T 18-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 SHALO_2633 1c2f388c9028c35d4a9b5b704fa5f3a6 190 Pfam PF09335 SNARE associated Golgi protein 28 142 1.1E-14 T 18-10-2018 IPR032816 SNARE associated Golgi protein SHALO_2216 161047a2ddeb8335944ea5345df8e0be 411 SUPERFAMILY SSF53448 9 250 1.41E-12 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_2854 ab017a43736efa0bcd02bfe9bdf79430 68 SUPERFAMILY SSF54285 1 67 5.09E-14 T 18-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp SHALO_2854 ab017a43736efa0bcd02bfe9bdf79430 68 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 67 5.7E-18 T 18-10-2018 IPR010035 ThiS, thiamine-biosynthesis SHALO_2854 ab017a43736efa0bcd02bfe9bdf79430 68 Gene3D G3DSA:3.10.20.30 1 68 2.6E-22 T 18-10-2018 IPR012675 Beta-grasp domain superfamily SHALO_2854 ab017a43736efa0bcd02bfe9bdf79430 68 Pfam PF02597 ThiS family 4 67 7.3E-11 T 18-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 SHALO_1211 c7a1c55c3aae21e62680bcdbf6f87a28 143 PIRSF PIRSF005788 1 143 1.4E-41 T 18-10-2018 IPR004952 Uncharacterised protein family UPF0460 SHALO_1211 c7a1c55c3aae21e62680bcdbf6f87a28 143 Pfam PF03270 Protein of unknown function, DUF269 25 142 7.1E-36 T 18-10-2018 IPR004952 Uncharacterised protein family UPF0460 SHALO_1211 c7a1c55c3aae21e62680bcdbf6f87a28 143 Gene3D G3DSA:1.10.3100.20 1 143 3.6E-45 T 18-10-2018 SHALO_0555 4899934273e9c6d6e14dd47f2a28beb5 249 PRINTS PR01805 VacJ lipoprotein signature 112 129 1.2E-20 T 18-10-2018 IPR007428 MlaA lipoprotein GO:0016020 SHALO_0555 4899934273e9c6d6e14dd47f2a28beb5 249 PRINTS PR01805 VacJ lipoprotein signature 61 77 1.2E-20 T 18-10-2018 IPR007428 MlaA lipoprotein GO:0016020 SHALO_0555 4899934273e9c6d6e14dd47f2a28beb5 249 PRINTS PR01805 VacJ lipoprotein signature 149 166 1.2E-20 T 18-10-2018 IPR007428 MlaA lipoprotein GO:0016020 SHALO_0555 4899934273e9c6d6e14dd47f2a28beb5 249 PRINTS PR01805 VacJ lipoprotein signature 44 57 1.2E-20 T 18-10-2018 IPR007428 MlaA lipoprotein GO:0016020 SHALO_0555 4899934273e9c6d6e14dd47f2a28beb5 249 Pfam PF04333 MlaA lipoprotein 44 244 7.9E-64 T 18-10-2018 IPR007428 MlaA lipoprotein GO:0016020 SHALO_1512 cde28e7370699886258657161f2f7bd1 85 Pfam PF04071 Cysteine-rich small domain 3 82 1.3E-27 T 18-10-2018 IPR007212 Cysteine-rich small domain SHALO_0035 94458dcd5e500966811472d6f99fdbdb 178 Gene3D G3DSA:1.20.1290.10 15 178 8.0E-28 T 18-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 SHALO_0035 94458dcd5e500966811472d6f99fdbdb 178 SUPERFAMILY SSF69118 1 177 1.44E-37 T 18-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 SHALO_0344 61bf5c3b9a070c042c661c2dd8bd5bd7 168 SUPERFAMILY SSF160387 66 132 1.67E-7 T 18-10-2018 SHALO_0708 454c002cac2afe5a238f8ef3f8ed6108 141 SUPERFAMILY SSF52833 9 125 9.88E-25 T 18-10-2018 IPR036249 Thioredoxin-like superfamily SHALO_0708 454c002cac2afe5a238f8ef3f8ed6108 141 Pfam PF03960 ArsC family 70 101 2.0E-5 T 18-10-2018 IPR006660 Arsenate reductase-like SHALO_0708 454c002cac2afe5a238f8ef3f8ed6108 141 Gene3D G3DSA:3.40.30.10 4 119 1.7E-16 T 18-10-2018 SHALO_1677 60d53b8a6d071815220693305f474f73 282 Pfam PF13462 Thioredoxin 123 277 5.3E-13 T 18-10-2018 IPR012336 Thioredoxin-like fold SHALO_1677 60d53b8a6d071815220693305f474f73 282 Gene3D G3DSA:3.40.30.10 121 282 8.0E-23 T 18-10-2018 SHALO_1677 60d53b8a6d071815220693305f474f73 282 SUPERFAMILY SSF52833 121 274 5.81E-21 T 18-10-2018 IPR036249 Thioredoxin-like superfamily SHALO_2767 705b06f1a570e0bdff9c2fb59fed5727 76 SUPERFAMILY SSF101744 3 70 2.62E-7 T 18-10-2018 IPR023534 Rof/RNase P-like Reactome: R-HSA-6784531 SHALO_1214 6449a46d1e673941d3fb0d048f87f55b 120 Pfam PF04319 NifZ domain 25 98 3.4E-24 T 18-10-2018 IPR007415 Nitrogenase MoFe maturation protein, NifZ GO:0009399 SHALO_0535 440fb56918d72d80b33fa9473413ebdb 96 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 83 1.5E-12 T 18-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family SHALO_0535 440fb56918d72d80b33fa9473413ebdb 96 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 4 83 2.1E-10 T 18-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family SHALO_0535 440fb56918d72d80b33fa9473413ebdb 96 Gene3D G3DSA:3.30.2310.20 1 94 6.3E-24 T 18-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily SHALO_0535 440fb56918d72d80b33fa9473413ebdb 96 SUPERFAMILY SSF143011 1 83 1.7E-20 T 18-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily SHALO_0991 0c4ef6641b2dce339c9af2a79c4821d8 275 Pfam PF06629 MltA-interacting protein MipA 55 275 1.9E-41 T 18-10-2018 IPR010583 MltA-interacting MipA SHALO_2910 689114525cf9c7300f7fbc27f6c9802f 287 TIGRFAM TIGR03590 PseG: UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase 1 258 7.3E-68 T 18-10-2018 IPR020023 UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase SHALO_2910 689114525cf9c7300f7fbc27f6c9802f 287 Gene3D G3DSA:3.40.50.11190 1 140 1.2E-41 T 18-10-2018 SHALO_2910 689114525cf9c7300f7fbc27f6c9802f 287 Gene3D G3DSA:3.40.50.2000 141 279 2.0E-37 T 18-10-2018 SHALO_0494 6eb2900cabba6c7492fe447eb1db71c5 186 SUPERFAMILY SSF46626 131 186 1.21E-6 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_0494 6eb2900cabba6c7492fe447eb1db71c5 186 Gene3D G3DSA:1.10.760.10 129 185 2.3E-5 T 18-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_0386 d122baa087f4cd63f4b4e880abe8e059 309 SUPERFAMILY SSF53448 5 257 8.26E-37 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_0386 d122baa087f4cd63f4b4e880abe8e059 309 Gene3D G3DSA:3.90.550.10 2 227 5.5E-31 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_0386 d122baa087f4cd63f4b4e880abe8e059 309 Pfam PF00535 Glycosyl transferase family 2 7 150 7.1E-26 T 18-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 SHALO_1376 030d9e82bf07f34f70489ed654a81e3a 185 SUPERFAMILY SSF51391 3 184 6.8E-34 T 18-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 SHALO_1376 030d9e82bf07f34f70489ed654a81e3a 185 Gene3D G3DSA:3.20.20.70 1 185 1.1E-37 T 18-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_1376 030d9e82bf07f34f70489ed654a81e3a 185 Pfam PF02581 Thiamine monophosphate synthase 5 181 1.3E-28 T 18-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 SHALO_2084 8505d8d11f495fbf769f6ae087126eb9 396 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 41 162 6.8E-10 T 18-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like SHALO_0600 8bf405bddd74673202be3c412cb49e28 259 Pfam PF08378 Nuclease-related domain 22 134 5.8E-28 T 18-10-2018 IPR011528 Nuclease-related domain, NERD SHALO_0600 8bf405bddd74673202be3c412cb49e28 259 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 213 249 2.0E-10 T 18-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 SHALO_0600 8bf405bddd74673202be3c412cb49e28 259 SUPERFAMILY SSF57783 210 247 4.42E-6 T 18-10-2018 SHALO_0533 f1d7a1ea3a4236f40aee71dad54d0e8b 908 SUPERFAMILY SSF48371 502 869 1.07E-6 T 18-10-2018 IPR016024 Armadillo-type fold SHALO_2489 215e5e9b52d565da4bac4b2cc9eeef73 75 Pfam PF03994 Domain of Unknown Function (DUF350) 20 71 2.5E-6 T 18-10-2018 IPR007140 Protein of unknown function DUF350 SHALO_1651 c4c0f7ea47bd1df8469c31e6af12d47d 120 Gene3D G3DSA:3.40.30.10 8 103 8.6E-10 T 18-10-2018 SHALO_1651 c4c0f7ea47bd1df8469c31e6af12d47d 120 SUPERFAMILY SSF52833 4 97 1.61E-10 T 18-10-2018 IPR036249 Thioredoxin-like superfamily SHALO_1651 c4c0f7ea47bd1df8469c31e6af12d47d 120 Pfam PF00085 Thioredoxin 20 99 2.4E-8 T 18-10-2018 IPR013766 Thioredoxin domain GO:0045454 SHALO_1513 8c1ed213a1aad775ba03dce308742a67 230 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 230 36.397 T 18-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 SHALO_1513 8c1ed213a1aad775ba03dce308742a67 230 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 1 224 5.1E-42 T 18-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 SHALO_1513 8c1ed213a1aad775ba03dce308742a67 230 Pfam PF02654 Cobalamin-5-phosphate synthase 1 224 1.1E-51 T 18-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 SHALO_2841 c58c384a80f7ab4ef60c978c2bb7b899 394 Gene3D G3DSA:1.20.1600.10 6 174 5.0E-8 T 18-10-2018 SHALO_2841 c58c384a80f7ab4ef60c978c2bb7b899 394 Gene3D G3DSA:1.20.1600.10 181 393 5.0E-18 T 18-10-2018 SHALO_2841 c58c384a80f7ab4ef60c978c2bb7b899 394 Pfam PF02321 Outer membrane efflux protein 20 147 4.0E-8 T 18-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 SHALO_2841 c58c384a80f7ab4ef60c978c2bb7b899 394 Pfam PF02321 Outer membrane efflux protein 221 391 8.8E-11 T 18-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 SHALO_2841 c58c384a80f7ab4ef60c978c2bb7b899 394 SUPERFAMILY SSF56954 5 392 4.71E-31 T 18-10-2018 SHALO_1210 ea932cbcb9c9f34781710fdf20a9e5b3 118 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 12 99 3.5E-13 T 18-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis SHALO_1210 ea932cbcb9c9f34781710fdf20a9e5b3 118 SUPERFAMILY SSF53146 2 113 1.57E-22 T 18-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily SHALO_1210 ea932cbcb9c9f34781710fdf20a9e5b3 118 Gene3D G3DSA:3.30.420.130 1 114 1.5E-22 T 18-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily SHALO_2301 859ee39ea78bcbe1da723f0422d6bcdb 232 Pfam PF03649 Uncharacterised protein family (UPF0014) 16 154 3.6E-32 T 18-10-2018 IPR005226 UPF0014 family SHALO_2301 859ee39ea78bcbe1da723f0422d6bcdb 232 Pfam PF03649 Uncharacterised protein family (UPF0014) 152 225 1.9E-25 T 18-10-2018 IPR005226 UPF0014 family SHALO_2353 d99c81c0865bb5d4eb5a724d0ee1c818 136 Pfam PF04120 Low affinity iron permease 9 126 4.5E-50 T 18-10-2018 IPR007251 Low affinity iron permease, Fet4 GO:0055085 SHALO_0455 43e3a26015a9c1e062b88cf28eeaea7c 77 Pfam PF09905 DNA-binding protein VF530 8 69 7.3E-33 T 18-10-2018 IPR018668 DNA-binding protein VF530-like GO:0003677 SHALO_0455 43e3a26015a9c1e062b88cf28eeaea7c 77 Gene3D G3DSA:1.10.720.30 15 73 6.6E-28 T 18-10-2018 IPR036361 SAP domain superfamily SHALO_1584 1f78c131696d452a9c7aa4966ac4a9bf 126 Pfam PF03692 Putative zinc- or iron-chelating domain 18 120 5.1E-13 T 18-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein SHALO_1717 f23e55e1f35d94d6daaa1edf236af632 82 Gene3D G3DSA:1.10.260.40 19 74 1.0E-7 T 18-10-2018 SHALO_1717 f23e55e1f35d94d6daaa1edf236af632 82 SUPERFAMILY SSF47413 21 53 2.82E-6 T 18-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 SHALO_2821 453276a1074ef349aafa6dcbf1eaae73 364 Pfam PF12698 ABC-2 family transporter protein 20 356 1.2E-38 T 18-10-2018 SHALO_2390 cbc65c0d6f73c48f5344607918e3bb88 203 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 1 192 1.0E-46 T 18-10-2018 IPR039447 Urease accessory protein UreH-like, transmembrane domain SHALO_2109 3829dcc1f8a3cd7932050b4560201caa 134 Pfam PF03994 Domain of Unknown Function (DUF350) 13 66 1.8E-10 T 18-10-2018 IPR007140 Protein of unknown function DUF350 SHALO_2109 3829dcc1f8a3cd7932050b4560201caa 134 Pfam PF03994 Domain of Unknown Function (DUF350) 78 132 7.4E-9 T 18-10-2018 IPR007140 Protein of unknown function DUF350 SHALO_1141 a1bca61d1af2600c59b7fd2e14974b75 178 Pfam PF03748 Flagellar basal body-associated protein FliL 83 178 1.9E-26 T 18-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 SHALO_1130 1ea477371d1d410f1a7fac1f23f6e4c8 267 Pfam PF01925 Sulfite exporter TauE/SafE 10 262 7.9E-51 T 18-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 SHALO_1592 750700bab289b87db93736f54ba1e016 190 Pfam PF02361 Cobalt transport protein 23 156 1.5E-12 T 18-10-2018 IPR003339 ABC/ECF transporter, transmembrane component SHALO_0112 bd2244aa00078f3c686787ce8f1c54dc 261 Pfam PF02698 DUF218 domain 76 252 2.4E-20 T 18-10-2018 IPR003848 Domain of unknown function DUF218 SHALO_2116 718f57e2f7df582b4ddae2346c763a93 111 Pfam PF13359 DDE superfamily endonuclease 17 104 2.1E-9 T 18-10-2018 IPR027806 Harbinger transposase-derived nuclease domain SHALO_0777 4cf5265e010858a19a3e8b6367a4d142 448 Pfam PF05840 Bacteriophage replication gene A protein (GPA) 34 169 3.5E-15 T 18-10-2018 IPR008766 Replication gene A protein GO:0006260 SHALO_0391 755d3be6314ac084341f582bf07026a5 274 Pfam PF14358 Domain of unknown function (DUF4405) 7 73 3.1E-14 T 18-10-2018 IPR025517 Domain of unknown function DUF4405 SHALO_2040 b6cf2f4db6f196fafe353a7009b6aa24 162 Pfam PF13118 Protein of unknown function (DUF3972) 9 133 8.2E-47 T 18-10-2018 IPR025002 Domain of unknown function DUF3972 SHALO_2990 971d3753dc0d110fdb9fbafcce203df1 251 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 47 243 9.7E-49 T 18-10-2018 IPR006214 Bax inhibitor 1-related SHALO_1090 bc5abe0de017ee60d578aaf3ddb2ab22 125 Gene3D G3DSA:2.60.120.10 6 122 1.1E-26 T 18-10-2018 IPR014710 RmlC-like jelly roll fold SHALO_1090 bc5abe0de017ee60d578aaf3ddb2ab22 125 Pfam PF07883 Cupin domain 39 104 8.0E-12 T 18-10-2018 IPR013096 Cupin 2, conserved barrel SHALO_1090 bc5abe0de017ee60d578aaf3ddb2ab22 125 SUPERFAMILY SSF51182 10 107 1.13E-21 T 18-10-2018 IPR011051 RmlC-like cupin domain superfamily SHALO_3011 98fa24890a6947c1beefd4ad0386356c 150 Pfam PF03748 Flagellar basal body-associated protein FliL 57 147 1.9E-13 T 18-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 SHALO_1308 8e88d918b669e85340c04a68f275002b 66 Pfam PF04328 Selenoprotein, putative 5 66 1.2E-28 T 18-10-2018 IPR007423 Selenoprotein, putative SHALO_2686 894fab5e9ffa8ca6be4d64a58570246d 239 SUPERFAMILY SSF89155 6 203 3.4E-30 T 18-10-2018 IPR036411 TorD-like superfamily SHALO_2686 894fab5e9ffa8ca6be4d64a58570246d 239 Gene3D G3DSA:1.10.3480.10 2 205 9.2E-22 T 18-10-2018 SHALO_2686 894fab5e9ffa8ca6be4d64a58570246d 239 Pfam PF02613 Nitrate reductase delta subunit 67 168 3.3E-9 T 18-10-2018 IPR020945 DMSO/Nitrate reductase chaperone SHALO_0150 1726648b545863de5a16d33ff8a6f11a 201 Pfam PF01914 MarC family integral membrane protein 7 197 2.9E-53 T 18-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 SHALO_0255 9f207448514c80781b714ac910119aae 352 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 348 1.4E-35 T 18-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 SHALO_0760 230813ec4344f5fab57539b1b41fb08b 392 SUPERFAMILY SSF47226 285 387 1.56E-6 T 18-10-2018 IPR036641 HPT domain superfamily GO:0000160 SHALO_0760 230813ec4344f5fab57539b1b41fb08b 392 Gene3D G3DSA:1.20.120.160 280 391 4.9E-7 T 18-10-2018 IPR036641 HPT domain superfamily GO:0000160 SHALO_0398 90ca028632a38ccf0a5a4655e9499891 145 PIRSF PIRSF028687 1 145 1.1E-27 T 18-10-2018 IPR007293 Flagellar protein FlgP SHALO_1851 91944d9931aa5205645292f33deda3f5 148 Pfam PF09719 Putative redox-active protein (C_GCAxxG_C_C) 16 136 4.5E-23 T 18-10-2018 IPR010181 CGCAxxGCC motif SHALO_0924 95fb35acc1d86f90b094480c248f23ba 223 Pfam PF09335 SNARE associated Golgi protein 73 190 4.3E-27 T 18-10-2018 IPR032816 SNARE associated Golgi protein SHALO_1179 2fc6dc04906714a4aa62f94f1f515340 360 Pfam PF12704 MacB-like periplasmic core domain 16 204 1.4E-8 T 18-10-2018 IPR025857 MacB-like periplasmic core domain SHALO_1179 2fc6dc04906714a4aa62f94f1f515340 360 Pfam PF02687 FtsX-like permease family 259 351 1.1E-12 T 18-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 SHALO_2659 f93163eb7a836550497386916a8a1d3f 247 Pfam PF02613 Nitrate reductase delta subunit 46 169 3.0E-14 T 18-10-2018 IPR020945 DMSO/Nitrate reductase chaperone SHALO_2659 f93163eb7a836550497386916a8a1d3f 247 SUPERFAMILY SSF89155 7 206 4.32E-30 T 18-10-2018 IPR036411 TorD-like superfamily SHALO_2659 f93163eb7a836550497386916a8a1d3f 247 Gene3D G3DSA:1.10.3480.10 3 201 2.0E-23 T 18-10-2018 SHALO_1882 23e6dc268035f37b48ebba437d5c0ab9 206 PIRSF PIRSF006324 1 206 2.2E-59 T 18-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 SHALO_1882 23e6dc268035f37b48ebba437d5c0ab9 206 Pfam PF01810 LysE type translocator 18 203 6.2E-36 T 18-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 SHALO_2766 fb660ccf6d221192ad71f0b489b37eca 140 Pfam PF09335 SNARE associated Golgi protein 32 133 1.5E-13 T 18-10-2018 IPR032816 SNARE associated Golgi protein SHALO_1872 959178574b51c2bc51023a0b7377c865 102 Gene3D G3DSA:3.30.460.10 1 101 1.1E-13 T 18-10-2018 SHALO_1872 959178574b51c2bc51023a0b7377c865 102 SUPERFAMILY SSF81301 4 86 2.72E-11 T 18-10-2018 SHALO_1872 959178574b51c2bc51023a0b7377c865 102 Pfam PF01909 Nucleotidyltransferase domain 27 101 6.6E-10 T 18-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 SHALO_2203 4a4f2546279911d240688e61b4d2d65b 220 Pfam PF02666 Phosphatidylserine decarboxylase 49 208 1.3E-4 T 18-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 SHALO_1320 5e0cd2bc589241d7d2f32628eba5895e 392 Gene3D G3DSA:1.20.1530.20 1 386 3.2E-39 T 18-10-2018 IPR038770 Sodium/solute symporter superfamily SHALO_1320 5e0cd2bc589241d7d2f32628eba5895e 392 Pfam PF00999 Sodium/hydrogen exchanger family 10 379 2.6E-38 T 18-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 SHALO_2381 49049974e2b9f9ff0fcf74f5267d3671 147 Pfam PF13115 YtkA-like 49 126 2.3E-11 T 18-10-2018 IPR032693 YtkA-like domain SHALO_2870 f618e6b03e942e9ac023835ea46d5c21 319 Pfam PF03773 Predicted permease 26 316 4.5E-68 T 18-10-2018 IPR005524 Predicted permease DUF318 SHALO_1309 9401577de33d4e7c5087b03af467433e 707 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 473 601 1.1E-33 T 18-10-2018 IPR025299 CstA, C-terminal domain SHALO_1309 9401577de33d4e7c5087b03af467433e 707 Pfam PF02554 Carbon starvation protein CstA 36 405 2.8E-163 T 18-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 SHALO_2173 f5e0146ae9953f0fee73b4147d9d742d 263 Pfam PF02582 Uncharacterised ACR, YagE family COG1723 95 215 6.8E-19 T 18-10-2018 IPR003734 Domain of unknown function DUF155 SHALO_1951 92bdd7e3be1fbcba3eefabe5896a40ab 124 Gene3D G3DSA:1.10.10.10 1 117 4.8E-35 T 18-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHALO_1951 92bdd7e3be1fbcba3eefabe5896a40ab 124 SUPERFAMILY SSF46785 11 111 3.7E-30 T 18-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SHALO_1951 92bdd7e3be1fbcba3eefabe5896a40ab 124 Pfam PF01638 HxlR-like helix-turn-helix 23 112 2.7E-29 T 18-10-2018 IPR002577 Helix-turn-helix, HxlR type SHALO_2961 69f26fb86cb5976903414562f5651819 191 SUPERFAMILY SSF53448 6 187 2.48E-22 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_2961 69f26fb86cb5976903414562f5651819 191 Gene3D G3DSA:3.90.550.10 6 190 5.7E-41 T 18-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_2961 69f26fb86cb5976903414562f5651819 191 Pfam PF12804 MobA-like NTP transferase domain 9 161 4.4E-24 T 18-10-2018 IPR025877 MobA-like NTP transferase SHALO_2961 69f26fb86cb5976903414562f5651819 191 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 4 187 20.974 T 18-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 SHALO_2885 2e90872f255e6da31b8465cd4d5a1840 278 Pfam PF03916 Polysulphide reductase, NrfD 2 277 2.5E-22 T 18-10-2018 IPR005614 NrfD family SHALO_1092 936af52f32dc3e8f2c262a5dedc8d97e 182 Pfam PF00857 Isochorismatase family 8 157 3.8E-26 T 18-10-2018 IPR000868 Isochorismatase-like GO:0003824 SHALO_1092 936af52f32dc3e8f2c262a5dedc8d97e 182 Gene3D G3DSA:3.40.50.850 1 182 8.5E-53 T 18-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 SHALO_1092 936af52f32dc3e8f2c262a5dedc8d97e 182 SUPERFAMILY SSF52499 2 180 1.05E-46 T 18-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 SHALO_2872 c46880585581a162f58efc3612664b2f 235 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 23 228 8.2E-16 T 18-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 SHALO_1794 e4900b162e0dc46d69bae1b6dd6a5eec 156 Pfam PF13664 Domain of unknown function (DUF4149) 11 115 1.2E-10 T 18-10-2018 IPR025423 Domain of unknown function DUF4149 SHALO_0292 1c46bf3d376d810032ecdc90384e7886 83 SUPERFAMILY SSF64376 2 66 1.83E-8 T 18-10-2018 IPR035931 YlxR-like superfamily SHALO_0292 1c46bf3d376d810032ecdc90384e7886 83 Pfam PF04296 Protein of unknown function (DUF448) 6 65 7.5E-5 T 18-10-2018 IPR007393 Domain of unknown function DUF448 SHALO_2927 f7d1c201a5b693e4c735143efe975efc 630 Pfam PF01973 Protein of unknown function DUF115 206 377 9.2E-35 T 18-10-2018 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like SHALO_0540 35b54f2b5cb7128efb48a5248e3f22e1 158 SUPERFAMILY SSF49764 34 157 2.97E-38 T 18-10-2018 IPR008978 HSP20-like chaperone SHALO_0540 35b54f2b5cb7128efb48a5248e3f22e1 158 Gene3D G3DSA:2.60.40.790 9 158 3.8E-37 T 18-10-2018 IPR008978 HSP20-like chaperone SHALO_0540 35b54f2b5cb7128efb48a5248e3f22e1 158 Pfam PF00011 Hsp20/alpha crystallin family 58 158 2.5E-27 T 18-10-2018 IPR002068 Alpha crystallin/Hsp20 domain SHALO_2445 5666646b754c2ba8fe56f2c91f75e71f 387 Pfam PF02687 FtsX-like permease family 292 377 9.2E-11 T 18-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 SHALO_2508 7fc2413cf95d96449c01fe3edee330eb 219 SUPERFAMILY SSF47240 13 125 4.65E-9 T 18-10-2018 IPR009078 Ferritin-like superfamily SHALO_0732 01ff06ac37880f385607cb311c9c3993 70 Pfam PF14899 Domain of unknown function (DUF4492) 7 66 9.3E-22 T 18-10-2018 IPR027853 Protein of unknown function DUF4492 SHALO_1234 8fa3568d7e3825cd9d383e78cf2c6dca 167 Gene3D G3DSA:3.30.2010.10 70 161 5.9E-7 T 18-10-2018 SHALO_1234 8fa3568d7e3825cd9d383e78cf2c6dca 167 Pfam PF01863 Protein of unknown function DUF45 95 149 3.6E-11 T 18-10-2018 IPR002725 Protein of unknown function DUF45 SHALO_0211 0d6b001dbdd689a6569b1352e398ea30 307 Gene3D G3DSA:1.10.260.40 3 97 2.3E-5 T 18-10-2018 SHALO_2187 0e29c6d02ae64753fefde31a77a5c7fb 479 Pfam PF13502 AsmA-like C-terminal region 209 398 2.1E-10 T 18-10-2018 IPR032712 AsmA-like, C-terminal SHALO_2187 0e29c6d02ae64753fefde31a77a5c7fb 479 Pfam PF05170 AsmA family 7 168 5.3E-19 T 18-10-2018 IPR007844 AsmA SHALO_0727 9bc8d9ea4f7341f49329505d3ba4d32e 218 Gene3D G3DSA:3.30.2010.10 121 215 6.8E-20 T 18-10-2018 SHALO_0727 9bc8d9ea4f7341f49329505d3ba4d32e 218 Pfam PF01863 Protein of unknown function DUF45 109 212 3.9E-34 T 18-10-2018 IPR002725 Protein of unknown function DUF45 SHALO_1753 92acb0d84b830aa9e900ee111e19cd06 400 Pfam PF13941 MutL protein 35 297 1.1E-25 T 18-10-2018 IPR006230 Protein MutL SHALO_2069 736ee444a3c2122370a2b032951f0250 386 Pfam PF01098 Cell cycle protein 7 385 1.7E-82 T 18-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 SHALO_2572 812f8006e7d55379de27c3e32f1ecb49 71 SUPERFAMILY SSF47598 2 42 1.09E-6 T 18-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 SHALO_1059 66e766b3c37301f08932cb5a83d78496 155 Pfam PF12821 Threonine/Serine exporter, ThrE 11 145 2.6E-39 T 18-10-2018 IPR024528 Threonine/Serine exporter, ThrE SHALO_0341 9bed60bb03e7939407c80babc91223d7 410 Pfam PF05940 NnrS protein 22 404 7.8E-63 T 18-10-2018 IPR010266 NnrS SHALO_0562 bb9c55957bc9ab862a3ff3dc6fe923ed 80 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 8.9E-23 T 18-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 SHALO_0562 bb9c55957bc9ab862a3ff3dc6fe923ed 80 Pfam PF02416 mttA/Hcf106 family 5 51 2.9E-21 T 18-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 SHALO_0562 bb9c55957bc9ab862a3ff3dc6fe923ed 80 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 76 21.675 T 18-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 SHALO_1678 8c25bec04a18e73001a6ac9c6c4ef643 142 Pfam PF04186 FxsA cytoplasmic membrane protein 4 103 6.9E-16 T 18-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 SHALO_1054 db4beb8498abcc3c5e3fa5aac78412b9 220 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 6 173 6.3E-23 T 18-10-2018 IPR007296 Domain of unknown function DUF403 SHALO_0028 e797108b2ebd3e616916c8dc3c6cd62c 447 Pfam PF05538 Campylobacter major outer membrane protein 1 447 6.7E-13 T 18-10-2018 IPR008439 Campylobacter major outer membrane SHALO_0028 e797108b2ebd3e616916c8dc3c6cd62c 447 Gene3D G3DSA:2.40.160.10 75 447 7.1E-26 T 18-10-2018 IPR023614 Porin domain superfamily SHALO_0705 c8f30a783ea4d4b0479e375298a5415a 309 Pfam PF03547 Membrane transport protein 3 143 2.8E-17 T 18-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 SHALO_1032 b4f557bcf5af9535f9b22fba6f67676c 162 PIRSF PIRSF003174 3 161 4.9E-64 T 18-10-2018 IPR010292 Uncharacterised protein family CreA SHALO_1032 b4f557bcf5af9535f9b22fba6f67676c 162 Pfam PF05981 CreA protein 27 157 4.3E-57 T 18-10-2018 IPR010292 Uncharacterised protein family CreA SHALO_0896 cb83d18b03b267cfb066d3d95b6d67e7 217 SUPERFAMILY SSF48452 96 213 1.36E-12 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SHALO_0896 cb83d18b03b267cfb066d3d95b6d67e7 217 Gene3D G3DSA:1.25.40.10 87 215 9.7E-13 T 18-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SHALO_1106 fda4ad279dd4d3d88fc83e7a8569f4fc 100 Pfam PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter 20 66 9.1E-10 T 18-10-2018 IPR032820 Putative F0F1-ATPase subunit, Ca2+/Mg2+ transporter SHALO_0734 b94ad8fd2b5e459ad9076dd777a6edb9 377 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 10 359 9.3E-65 T 18-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 SHALO_1906 e95823f8554b4c94fe63fd67ffbf22a2 301 Pfam PF10543 ORF6N domain 15 100 1.2E-29 T 18-10-2018 IPR018873 KilA-N, DNA-binding domain SHALO_2155 37a847d0e65bea7d4628f92e6b567a4f 388 Pfam PF07238 PilZ domain 270 370 3.8E-9 T 18-10-2018 IPR009875 PilZ domain GO:0035438 SHALO_2299 70fd86a4df982472f8605a8673cb16a3 199 ProDom PD105539 COIL PRECURSOR AQ_678 COILED SIGNAL 16 198 3.0E-24 T 18-10-2018 SHALO_1994 8da04d8aa781d46daf12215913b494ce 130 Pfam PF04519 Polymer-forming cytoskeletal 18 113 2.7E-20 T 18-10-2018 IPR007607 Bactofilin A/B SHALO_1337 046f4c656e0c0586678139311da9e90b 257 Pfam PF01618 MotA/TolQ/ExbB proton channel family 103 217 3.6E-18 T 18-10-2018 IPR002898 MotA/TolQ/ExbB proton channel SHALO_0686 edc13f2a8beb5e80328a56d72d808b3f 257 Pfam PF13103 TonB C terminal 169 252 2.8E-13 T 18-10-2018 SHALO_1701 b25ea1f320abe3d48d0dd492417e823c 181 Gene3D G3DSA:3.10.129.10 17 167 8.9E-41 T 18-10-2018 SHALO_1701 b25ea1f320abe3d48d0dd492417e823c 181 SUPERFAMILY SSF54637 60 154 2.61E-14 T 18-10-2018 IPR029069 HotDog domain superfamily SHALO_1227 787aca788b075ed434cfc77748541b98 659 PIRSF PIRSF015380 2 659 4.4E-183 T 18-10-2018 IPR011385 Putative site-specific recombinase Gcr SHALO_1227 787aca788b075ed434cfc77748541b98 659 Pfam PF10136 Site-specific recombinase 20 652 5.7E-194 T 18-10-2018 IPR011385 Putative site-specific recombinase Gcr SHALO_1661 52d1a56e533441c9733a35931c072bee 221 SUPERFAMILY SSF52833 6 216 3.11E-41 T 18-10-2018 IPR036249 Thioredoxin-like superfamily SHALO_1661 52d1a56e533441c9733a35931c072bee 221 Pfam PF01323 DSBA-like thioredoxin domain 8 208 1.3E-26 T 18-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 SHALO_1661 52d1a56e533441c9733a35931c072bee 221 Gene3D G3DSA:3.40.30.10 2 213 3.2E-60 T 18-10-2018 SHALO_3009 0f95269b9bf7d47eb620515ac661bc92 153 Pfam PF06271 RDD family 24 146 1.5E-13 T 18-10-2018 IPR010432 RDD SHALO_1446 36f3d44c65c82d440e8f66755d4ed15a 643 Pfam PF03961 Flagellar Assembly Protein A 150 620 3.2E-39 T 18-10-2018 IPR005646 Flagellar assembly protein A SHALO_2722 ee9b0bd5205a33f045d67a7c2457d7de 120 SUPERFAMILY SSF54637 3 114 4.47E-6 T 18-10-2018 IPR029069 HotDog domain superfamily SHALO_2722 ee9b0bd5205a33f045d67a7c2457d7de 120 Gene3D G3DSA:3.10.129.10 2 120 4.5E-5 T 18-10-2018 SHALO_0765 cd8c81a7b8aab0238321608fa7448496 449 Pfam PF03600 Citrate transporter 40 392 7.8E-37 T 18-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 SHALO_0748 8d3ce3ceda0bed898c8a63cafa57908a 179 Pfam PF02674 Colicin V production protein 7 153 2.4E-27 T 18-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 SHALO_0505 50c5f5b497aa944446621250c48c83e2 106 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 4 102 18.239 T 18-10-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 SHALO_0505 50c5f5b497aa944446621250c48c83e2 106 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 9 95 9.2E-21 T 18-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like SHALO_1001 5bb14fe36eadc43f1894e547edec8f38 125 Pfam PF08905 Domain of unknown function (DUF1850) 20 105 4.6E-26 T 18-10-2018 IPR015001 Protein of unknown function DUF1850 SHALO_2810 08f680599bab7b9db2436c5b2a9d8e01 73 Pfam PF09851 Short C-terminal domain 45 71 6.6E-8 T 18-10-2018 IPR018649 SHOCT domain SHALO_0859 94508349bb4b3994efad5286d64ad228 188 Pfam PF03923 Uncharacterized lipoprotein 49 182 1.8E-10 T 18-10-2018 IPR005619 Uncharacterised protein family, YajG SHALO_0815 c9c7dee7e302a2caaca7d7bb9deee4b4 137 Pfam PF11026 Protein of unknown function (DUF2721) 6 121 3.6E-33 T 18-10-2018 IPR021279 Protein of unknown function DUF2721 SHALO_2313 1a11648aac1598abb2d22e928c606cd0 157 Pfam PF04463 Protein of unknown function (DUF523) 6 144 3.7E-42 T 18-10-2018 IPR007553 Domain of unknown function DUF523 SHALO_0466 c78bf59d5b65b0803cbfbc1efff2e0b8 247 Pfam PF03883 Peroxide stress protein YaaA 1 230 2.9E-40 T 18-10-2018 IPR005583 Peroxide stress protein YaaA SHALO_2693 3bf1b6ae9a7c8a9ca95fb5cbf1f4e1af 284 Pfam PF02754 Cysteine-rich domain 6 86 5.6E-12 T 18-10-2018 IPR004017 Cysteine-rich domain SHALO_2693 3bf1b6ae9a7c8a9ca95fb5cbf1f4e1af 284 Pfam PF02754 Cysteine-rich domain 145 235 3.8E-15 T 18-10-2018 IPR004017 Cysteine-rich domain SHALO_2621 c3406e072ad74d68c50f5a5b6f576e11 897 Pfam PF01578 Cytochrome C assembly protein 655 859 1.2E-41 T 18-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 SHALO_2621 c3406e072ad74d68c50f5a5b6f576e11 897 Pfam PF05140 ResB-like family 211 285 4.0E-16 T 18-10-2018 IPR007816 ResB-like domain SHALO_2621 c3406e072ad74d68c50f5a5b6f576e11 897 Pfam PF05140 ResB-like family 73 116 2.8E-6 T 18-10-2018 IPR007816 ResB-like domain SHALO_2999 25417d7962f5ef54a1c5e4a9120420a7 388 Pfam PF03916 Polysulphide reductase, NrfD 50 328 5.9E-21 T 18-10-2018 IPR005614 NrfD family SHALO_0778 34bd52c7ca7960b626667cdfdf0aaddc 391 Pfam PF00263 Bacterial type II and III secretion system protein 236 388 1.0E-20 T 18-10-2018 IPR004846 Type II/III secretion system GO:0009306 SHALO_2712 e6b7c9e0c524e88f12c74bf3bac15488 286 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 104 283 4.8E-14 T 18-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 SHALO_0146 fac27e580c276cb89c3f3a1e3ae66a63 317 Pfam PF02470 MlaD protein 46 115 1.4E-15 T 18-10-2018 IPR003399 Mce/MlaD SHALO_0546 906a6113c6a98cbc6613141dedc187df 674 Pfam PF00350 Dynamin family 65 219 1.8E-27 T 18-10-2018 IPR022812 Dynamin superfamily SHALO_0546 906a6113c6a98cbc6613141dedc187df 674 SUPERFAMILY SSF52540 58 256 2.3E-30 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0546 906a6113c6a98cbc6613141dedc187df 674 Gene3D G3DSA:3.40.50.300 65 288 1.7E-40 T 18-10-2018 SHALO_2376 8c702b8f8b39ff4081ebdfe6bf03d287 97 Pfam PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system 20 92 2.0E-28 T 18-10-2018 IPR018669 Toxin-antitoxin system, toxin component, HigB, putative GO:0016788 SHALO_2760 c4bd31ea0fef36fd25716232dccf299d 112 Gene3D G3DSA:3.40.1260.10 1 112 9.7E-41 T 18-10-2018 IPR027396 DsrEFH-like SHALO_2760 c4bd31ea0fef36fd25716232dccf299d 112 SUPERFAMILY SSF75169 4 96 6.47E-8 T 18-10-2018 IPR027396 DsrEFH-like SHALO_0321 167781cf5e45d5da78ef60ccec3360ef 256 Pfam PF05818 Enterobacterial TraT complement resistance protein 25 256 6.3E-63 T 18-10-2018 IPR008874 Enterobacterial TraT complement resistance GO:0019867|GO:0046999 SHALO_1813 21c08e1393891c4ae828461e10711413 257 Gene3D G3DSA:3.90.1720.10 68 241 3.7E-12 T 18-10-2018 SHALO_0509 110b192d1b9ae924f16c8187dcc97093 221 Pfam PF13643 Domain of unknown function (DUF4145) 98 177 6.5E-14 T 18-10-2018 IPR025285 Domain of unknown function DUF4145 SHALO_2596 6e7eccb22d92a745ca20e191f7017fb8 461 Pfam PF02321 Outer membrane efflux protein 264 445 1.9E-14 T 18-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 SHALO_2596 6e7eccb22d92a745ca20e191f7017fb8 461 Pfam PF02321 Outer membrane efflux protein 59 235 1.0E-17 T 18-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 SHALO_2596 6e7eccb22d92a745ca20e191f7017fb8 461 Gene3D G3DSA:1.20.1600.10 28 457 5.5E-50 T 18-10-2018 SHALO_2596 6e7eccb22d92a745ca20e191f7017fb8 461 SUPERFAMILY SSF56954 53 456 1.18E-50 T 18-10-2018 SHALO_2728 9473510d0208b39f1cffa7390c2d6127 208 Pfam PF01810 LysE type translocator 17 206 6.7E-33 T 18-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 SHALO_1240 0f8e45c9017708cd954747985312a1ac 146 Pfam PF04773 FecR protein 56 142 3.8E-8 T 18-10-2018 IPR006860 FecR protein SHALO_1301 10e7c6169c739fd9b988d53e012fa4a1 93 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 5 84 8.3E-6 T 18-10-2018 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system SHALO_1189 eb787033a231af3cabeff718e0b91a67 422 SUPERFAMILY SSF53822 118 335 3.69E-5 T 18-10-2018 IPR028082 Periplasmic binding protein-like I SHALO_2790 051d1514599fd7925525964704304c64 413 Gene3D G3DSA:2.40.160.10 32 413 2.1E-18 T 18-10-2018 IPR023614 Porin domain superfamily SHALO_2790 051d1514599fd7925525964704304c64 413 Pfam PF03573 outer membrane porin, OprD family 125 216 6.5E-9 T 18-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 SHALO_0622 c552dd6a239f778578f5c0545b19bba2 111 Pfam PF01934 Protein of unknown function DUF86 13 107 4.2E-18 T 18-10-2018 IPR008201 Protein of unknown function DUF86 SHALO_0055 7ddda016ffb76e88684c902130ee2e68 1022 SUPERFAMILY SSF52540 150 348 3.78E-5 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_0055 7ddda016ffb76e88684c902130ee2e68 1022 Pfam PF10593 Z1 domain 458 704 1.4E-71 T 18-10-2018 IPR018310 Putative endonuclease, Z1 domain SHALO_0057 013943cda36aab940f3bd14149420a70 631 Pfam PF10592 AIPR protein 267 581 7.6E-64 T 18-10-2018 IPR018891 Abortive bacteriophage infection, resistance SHALO_0432 ff22cb8b469d85a4e4795363ab04e408 495 Pfam PF11074 Domain of unknown function(DUF2779) 297 421 1.0E-39 T 18-10-2018 IPR021301 Domain of unknown functionDUF2779 SHALO_1096 69d9ca4a38ca092caaca92fee592501c 237 Pfam PF09335 SNARE associated Golgi protein 61 177 6.0E-13 T 18-10-2018 IPR032816 SNARE associated Golgi protein SHALO_2550 d8b74beb01eeb22c28aba0c4102837c8 168 Pfam PF06226 Protein of unknown function (DUF1007) 5 141 9.4E-23 T 18-10-2018 IPR010412 Protein of unknown function DUF1007 SHALO_0739 9c480c72c4ea9e5f5d59003a7370633f 94 Pfam PF13453 Transcription factor zinc-finger 2 43 8.9E-22 T 18-10-2018 IPR027392 Transcription factor zinc-finger SHALO_1728 9673b52293c414ac0d677c5c0374873b 253 Pfam PF01925 Sulfite exporter TauE/SafE 12 245 1.0E-41 T 18-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 SHALO_2679 e8aa8f8f03a8686d0d56fc7efb8aa5e5 427 SUPERFAMILY SSF56935 140 427 5.49E-5 T 18-10-2018 SHALO_0903 de35e3d9e01fda0fec96b81c9b249e9e 236 Pfam PF01925 Sulfite exporter TauE/SafE 8 230 1.7E-20 T 18-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 SHALO_0684 e47567be2e1f208726ade99f86c815c4 196 Pfam PF01618 MotA/TolQ/ExbB proton channel family 83 179 1.5E-28 T 18-10-2018 IPR002898 MotA/TolQ/ExbB proton channel SHALO_0069 b6dd1401554309e6b829df6926654039 87 SUPERFAMILY SSF46955 28 80 3.48E-5 T 18-10-2018 IPR009061 Putative DNA-binding domain superfamily SHALO_1954 4490e98960fc5365ba690ab1e4712d39 229 Pfam PF07277 SapC 10 227 4.2E-52 T 18-10-2018 IPR010836 SapC SHALO_2685 7b41ca5e55ccec90c605069978cd1634 69 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 5 24 0.0016 T 18-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal SHALO_1626 a7bfe92af2c8a30dbf6471c8f2854b21 71 Pfam PF11381 Protein of unknown function (DUF3185) 10 67 1.8E-19 T 18-10-2018 IPR021521 Protein of unknown function DUF3185 SHALO_0691 42fd94bef73672bcebe34533535e17cf 254 SUPERFAMILY SSF52540 22 149 1.02E-7 T 18-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase