locus-tag class description FA584_00010 PF00890 FAD binding domain FA584_00010 PF14537 Cytochrome c3 FA584_00015 PF00925 GTP cyclohydrolase II FA584_00020 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FA584_00020 PF00925 GTP cyclohydrolase II FA584_00025 PF00885 6,7-dimethyl-8-ribityllumazine synthase FA584_00050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA584_00050 PF08447 PAS fold FA584_00050 PF08448 PAS fold FA584_00055 PF00072 Response regulator receiver domain FA584_00055 PF01966 HD domain FA584_00070 PF08447 PAS fold FA584_00070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA584_00070 PF08448 PAS fold FA584_00075 PF00486 Transcriptional regulatory protein, C terminal FA584_00075 PF00072 Response regulator receiver domain FA584_00085 PF12838 4Fe-4S dicluster domain FA584_00085 PF12800 4Fe-4S binding domain FA584_00095 PF03186 CobD/Cbib protein FA584_00100 PF00155 Aminotransferase class I and II FA584_00105 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase FA584_00110 PF07685 CobB/CobQ-like glutamine amidotransferase domain FA584_00115 PF02277 Phosphoribosyltransferase FA584_00125 PF02654 Cobalamin-5-phosphate synthase FA584_00130 PF00300 Histidine phosphatase superfamily (branch 1) FA584_00135 PF06180 Cobalt chelatase (CbiK) FA584_00145 PF00005 ABC transporter FA584_00155 PF02570 Precorrin-8X methylmutase FA584_00160 PF01888 CbiD FA584_00170 PF05175 Methyltransferase small domain FA584_00175 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FA584_00180 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FA584_00185 PF11761 Cobalamin biosynthesis central region FA584_00185 PF01890 Cobalamin synthesis G C-terminus FA584_00185 PF11760 Cobalamin synthesis G N-terminal FA584_00190 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FA584_00190 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FA584_00195 PF02602 Uroporphyrinogen-III synthase HemD FA584_00195 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FA584_00200 PF02571 Precorrin-6x reductase CbiJ/CobK FA584_00205 PF00005 ABC transporter FA584_00205 PF00664 ABC transporter transmembrane region FA584_00210 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FA584_00210 PF07685 CobB/CobQ-like glutamine amidotransferase domain FA584_00220 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FA584_00220 PF14824 Sirohaem biosynthesis protein central FA584_00220 PF10414 Sirohaem synthase dimerisation region FA584_00225 PF00440 Bacterial regulatory proteins, tetR family FA584_00225 PF18665 Tetracyclin repressor-like, C-terminal domain FA584_00330 PF00589 Phage integrase family FA584_00330 PF13356 Arm DNA-binding domain FA584_00365 PF00589 Phage integrase family FA584_00365 PF14659 Phage integrase, N-terminal SAM-like domain FA584_00375 PF00216 Bacterial DNA-binding protein FA584_00385 PF01580 FtsK/SpoIIIE family FA584_00385 PF09397 Ftsk gamma domain FA584_00385 PF17854 FtsK alpha domain FA584_00390 PF11791 Aconitate B N-terminal domain FA584_00390 PF06434 Aconitate hydratase 2 N-terminus FA584_00390 PF00330 Aconitase family (aconitate hydratase) FA584_00395 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FA584_00400 PF02896 PEP-utilising enzyme, TIM barrel domain FA584_00400 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain FA584_00400 PF00391 PEP-utilising enzyme, mobile domain FA584_00405 PF06629 MltA-interacting protein MipA FA584_00415 PF07690 Major Facilitator Superfamily FA584_00435 PF05958 tRNA (Uracil-5-)-methyltransferase FA584_00440 PF02743 Cache domain FA584_00440 PF00672 HAMP domain FA584_00440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA584_00445 PF13380 CoA binding domain FA584_00450 PF00291 Pyridoxal-phosphate dependent enzyme FA584_00450 PF13291 ACT domain FA584_00460 PF00005 ABC transporter FA584_00465 PF00528 Binding-protein-dependent transport system inner membrane component FA584_00470 PF00528 Binding-protein-dependent transport system inner membrane component FA584_00475 PF00497 Bacterial extracellular solute-binding proteins, family 3 FA584_00495 PF09335 SNARE associated Golgi protein FA584_00500 PF02687 FtsX-like permease family FA584_00500 PF12704 MacB-like periplasmic core domain FA584_00500 PF00005 ABC transporter FA584_00505 PF00171 Aldehyde dehydrogenase family FA584_00510 PF07992 Pyridine nucleotide-disulphide oxidoreductase FA584_00525 PF05175 Methyltransferase small domain FA584_00525 PF08468 Methyltransferase small domain N-terminal FA584_00530 PF03692 Putative zinc- or iron-chelating domain FA584_00540 PF00218 Indole-3-glycerol phosphate synthase FA584_00555 PF00005 ABC transporter FA584_00570 PF13190 PDGLE domain FA584_00570 PF01891 Cobalt uptake substrate-specific transmembrane region FA584_00575 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FA584_00580 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ FA584_00595 PF07992 Pyridine nucleotide-disulphide oxidoreductase FA584_00605 PF00205 Thiamine pyrophosphate enzyme, central domain FA584_00605 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FA584_00605 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FA584_00610 PF10369 Small subunit of acetolactate synthase FA584_00615 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD FA584_00615 PF00132 Bacterial transferase hexapeptide (six repeats) FA584_00625 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FA584_00625 PF07992 Pyridine nucleotide-disulphide oxidoreductase FA584_00630 PF00155 Aminotransferase class I and II FA584_00635 PF00148 Nitrogenase component 1 type Oxidoreductase FA584_00640 PF01590 GAF domain FA584_00640 PF02954 Bacterial regulatory protein, Fis family FA584_00640 PF00158 Sigma-54 interaction domain FA584_00650 PF00148 Nitrogenase component 1 type Oxidoreductase FA584_00655 PF03139 Vanadium/alternative nitrogenase delta subunit FA584_00660 PF00148 Nitrogenase component 1 type Oxidoreductase FA584_00665 PF00132 Bacterial transferase hexapeptide (six repeats) FA584_00670 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FA584_00670 PF17810 Arginine decarboxylase helical bundle domain FA584_00670 PF17944 Arginine decarboxylase C-terminal helical extension FA584_00675 PF03129 Anticodon binding domain FA584_00675 PF13393 Histidyl-tRNA synthetase FA584_00680 PF02223 Thymidylate kinase FA584_00685 PF01467 Cytidylyltransferase-like FA584_00690 PF02441 Flavoprotein FA584_00705 PF02743 Cache domain FA584_00705 PF00672 HAMP domain FA584_00705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA584_00710 PF03453 MoeA N-terminal region (domain I and II) FA584_00710 PF03454 MoeA C-terminal region (domain IV) FA584_00710 PF00994 Probable molybdopterin binding domain FA584_00715 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FA584_00730 PF00731 AIR carboxylase FA584_00735 PF02540 NAD synthase FA584_00740 PF01969 Protein of unknown function DUF111 FA584_00745 PF09861 Lactate racemase N-terminal domain FA584_00750 PF05681 Fumarate hydratase (Fumerase) FA584_00750 PF05683 Fumarase C-terminus FA584_00755 PF05683 Fumarase C-terminus FA584_00755 PF05681 Fumarate hydratase (Fumerase) FA584_00760 PF00939 Sodium:sulfate symporter transmembrane region FA584_00765 PF09308 LuxQ, periplasmic FA584_00765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA584_00765 PF00512 His Kinase A (phospho-acceptor) domain FA584_00765 PF00072 Response regulator receiver domain FA584_00770 PF00486 Transcriptional regulatory protein, C terminal FA584_00770 PF00072 Response regulator receiver domain FA584_00785 PF00300 Histidine phosphatase superfamily (branch 1) FA584_00795 PF00589 Phage integrase family FA584_00795 PF18644 Phage integrase SAM-like domain FA584_00800 PF01702 Queuine tRNA-ribosyltransferase FA584_00810 PF01761 3-dehydroquinate synthase FA584_00820 PF04055 Radical SAM superfamily FA584_00820 PF00919 Uncharacterized protein family UPF0004 FA584_00825 PF00004 ATPase family associated with various cellular activities (AAA) FA584_00825 PF01434 Peptidase family M41 FA584_00825 PF06480 FtsH Extracellular FA584_00825 PF17862 AAA+ lid domain FA584_00845 PF00296 Luciferase-like monooxygenase FA584_00850 PF01479 S4 domain FA584_00850 PF00849 RNA pseudouridylate synthase FA584_00860 PF00205 Thiamine pyrophosphate enzyme, central domain FA584_00860 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FA584_00860 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FA584_00880 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term FA584_00880 PF12833 Helix-turn-helix domain FA584_00890 PF08359 YsiA-like protein, C-terminal region FA584_00890 PF00440 Bacterial regulatory proteins, tetR family FA584_00900 PF00529 HlyD membrane-fusion protein of T1SS FA584_00900 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FA584_00905 PF00873 AcrB/AcrD/AcrF family FA584_00925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA584_00925 PF00672 HAMP domain FA584_00925 PF17202 Single cache domain 3 FA584_00930 PF02915 Rubrerythrin FA584_00940 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase FA584_00945 PF03900 Porphobilinogen deaminase, C-terminal domain FA584_00945 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain FA584_00950 PF13462 Thioredoxin FA584_00950 PF06965 Na+/H+ antiporter 1 FA584_00955 PF04186 FxsA cytoplasmic membrane protein FA584_00960 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FA584_00960 PF04073 Aminoacyl-tRNA editing domain FA584_00960 PF03129 Anticodon binding domain FA584_00965 PF01488 Shikimate / quinate 5-dehydrogenase FA584_00965 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain FA584_00965 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain FA584_00970 PF00348 Polyprenyl synthetase FA584_00985 PF01053 Cys/Met metabolism PLP-dependent enzyme FA584_00990 PF02082 Transcriptional regulator FA584_00995 PF00291 Pyridoxal-phosphate dependent enzyme FA584_01000 PF00990 Diguanylate cyclase, GGDEF domain FA584_01005 PF08264 Anticodon-binding domain of tRNA FA584_01005 PF00133 tRNA synthetases class I (I, L, M and V) FA584_01005 PF10458 Valyl tRNA synthetase tRNA binding arm FA584_01010 PF00994 Probable molybdopterin binding domain FA584_01015 PF08546 Ketopantoate reductase PanE/ApbA C terminal FA584_01015 PF02558 Ketopantoate reductase PanE/ApbA FA584_01020 PF00815 Histidinol dehydrogenase FA584_01030 PF01116 Fructose-bisphosphate aldolase class-II FA584_01040 PF00730 HhH-GPD superfamily base excision DNA repair protein FA584_01040 PF10576 Iron-sulfur binding domain of endonuclease III FA584_01040 PF00633 Helix-hairpin-helix motif FA584_01050 PF07687 Peptidase dimerisation domain FA584_01050 PF01546 Peptidase family M20/M25/M40 FA584_01075 PF02540 NAD synthase FA584_01080 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FA584_01085 PF02606 Tetraacyldisaccharide-1-P 4'-kinase FA584_01090 PF00696 Amino acid kinase family FA584_01095 PF00291 Pyridoxal-phosphate dependent enzyme FA584_01100 PF02348 Cytidylyltransferase FA584_01110 PF03976 Polyphosphate kinase 2 (PPK2) FA584_01115 PF01966 HD domain FA584_01120 PF00012 Hsp70 protein FA584_01125 PF01025 GrpE FA584_01140 PF00312 Ribosomal protein S15 FA584_01145 PF02082 Transcriptional regulator FA584_01150 PF00771 FHIPEP family FA584_01165 PF13649 Methyltransferase domain FA584_01170 PF00990 Diguanylate cyclase, GGDEF domain FA584_01170 PF13185 GAF domain FA584_01175 PF06574 FAD synthetase FA584_01175 PF01687 Riboflavin kinase FA584_01185 PF00533 BRCA1 C Terminus (BRCT) domain FA584_01185 PF12826 Helix-hairpin-helix motif FA584_01185 PF01653 NAD-dependent DNA ligase adenylation domain FA584_01185 PF03120 NAD-dependent DNA ligase OB-fold domain FA584_01190 PF01925 Sulfite exporter TauE/SafE FA584_01200 PF00809 Pterin binding enzyme FA584_01205 PF12169 DNA polymerase III subunits gamma and tau domain III FA584_01215 PF13840 ACT domain FA584_01215 PF01842 ACT domain FA584_01215 PF00696 Amino acid kinase family FA584_01220 PF00293 NUDIX domain FA584_01225 PF04055 Radical SAM superfamily FA584_01225 PF06969 HemN C-terminal domain FA584_01230 PF02254 TrkA-N domain FA584_01230 PF00999 Sodium/hydrogen exchanger family FA584_01235 PF13411 MerR HTH family regulatory protein FA584_01240 PF00684 DnaJ central domain FA584_01240 PF00226 DnaJ domain FA584_01240 PF01556 DnaJ C terminal domain FA584_01245 PF17820 PDZ domain FA584_01245 PF13180 PDZ domain FA584_01250 PF00486 Transcriptional regulatory protein, C terminal FA584_01250 PF00072 Response regulator receiver domain FA584_01270 PF07516 SecA Wing and Scaffold domain FA584_01270 PF01043 SecA preprotein cross-linking domain FA584_01270 PF07517 SecA DEAD-like domain FA584_01270 PF00271 Helicase conserved C-terminal domain FA584_01270 PF02810 SEC-C motif FA584_01275 PF03548 Outer membrane lipoprotein carrier protein LolA FA584_01280 PF00990 Diguanylate cyclase, GGDEF domain FA584_01280 PF03707 Bacterial signalling protein N terminal repeat FA584_01280 PF00563 EAL domain FA584_01285 PF06965 Na+/H+ antiporter 1 FA584_01290 PF10396 GTP-binding protein TrmE N-terminus FA584_01290 PF12631 MnmE helical domain FA584_01290 PF01926 50S ribosome-binding GTPase FA584_01300 PF14849 YidC periplasmic domain FA584_01300 PF02096 60Kd inner membrane protein FA584_01305 PF01809 Putative membrane protein insertion efficiency factor FA584_01310 PF00825 Ribonuclease P FA584_01315 PF00468 Ribosomal protein L34 FA584_01320 PF00668 Condensation domain FA584_01320 PF00550 Phosphopantetheine attachment site FA584_01320 PF13193 AMP-binding enzyme C-terminal domain FA584_01320 PF00501 AMP-binding enzyme FA584_01325 PF13941 MutL protein FA584_01330 PF06368 Methylaspartate mutase E chain (MutE) FA584_01335 PF02310 B12 binding domain FA584_01345 PF03737 Aldolase/RraA FA584_01360 PF17871 AAA lid domain FA584_01360 PF02861 Clp amino terminal domain, pathogenicity island component FA584_01360 PF07724 AAA domain (Cdc48 subfamily) FA584_01360 PF00004 ATPase family associated with various cellular activities (AAA) FA584_01360 PF10431 C-terminal, D2-small domain, of ClpB protein FA584_01365 PF03572 Peptidase family S41 FA584_01365 PF13180 PDZ domain FA584_01370 PF01259 SAICAR synthetase FA584_01375 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase FA584_01390 PF01553 Acyltransferase FA584_01395 PF00183 Hsp90 protein FA584_01415 PF03190 Protein of unknown function, DUF255 FA584_01420 PF00581 Rhodanese-like domain FA584_01425 PF00580 UvrD/REP helicase N-terminal domain FA584_01425 PF13361 UvrD-like helicase C-terminal domain FA584_01455 PF05970 PIF1-like helicase FA584_01455 PF02689 Helicase FA584_01475 PF08534 Redoxin FA584_01485 PF00403 Heavy-metal-associated domain FA584_01490 PF00403 Heavy-metal-associated domain FA584_01495 PF01966 HD domain FA584_01500 PF02646 RmuC family FA584_01510 PF01795 MraW methylase family FA584_01515 PF00202 Aminotransferase class-III FA584_01520 PF13145 PPIC-type PPIASE domain FA584_01525 PF02491 SHS2 domain inserted in FTSA FA584_01530 PF00091 Tubulin/FtsZ family, GTPase domain FA584_01530 PF12327 FtsZ family, C-terminal domain FA584_01540 PF02390 Putative methyltransferase FA584_01540 PF17827 PrmC N-terminal domain FA584_01540 PF05175 Methyltransferase small domain FA584_01545 PF01435 Peptidase family M48 FA584_01550 PF00672 HAMP domain FA584_01550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA584_01550 PF12729 Four helix bundle sensory module for signal transduction FA584_01560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA584_01560 PF00672 HAMP domain FA584_01570 PF01883 Iron-sulfur cluster assembly protein FA584_01585 PF02142 MGS-like domain FA584_01585 PF01808 AICARFT/IMPCHase bienzyme FA584_01590 PF02600 Disulfide bond formation protein DsbB FA584_01600 PF03061 Thioesterase superfamily FA584_01605 PF05099 Tellurite resistance protein TerB FA584_01605 PF00226 DnaJ domain FA584_01610 PF00155 Aminotransferase class I and II FA584_01630 PF03641 Possible lysine decarboxylase FA584_01650 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FA584_01655 PF09209 Tetracyclin repressor-like, C-terminal domain FA584_01655 PF00440 Bacterial regulatory proteins, tetR family FA584_01665 PF00872 Transposase, Mutator family FA584_01670 PF02769 AIR synthase related protein, C-terminal domain FA584_01670 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain FA584_01670 PF00586 AIR synthase related protein, N-terminal domain FA584_01675 PF00990 Diguanylate cyclase, GGDEF domain FA584_01675 PF03707 Bacterial signalling protein N terminal repeat FA584_01675 PF00563 EAL domain FA584_01680 PF02416 mttA/Hcf106 family FA584_01685 PF00902 Sec-independent protein translocase protein (TatC) FA584_01690 PF02547 Queuosine biosynthesis protein FA584_01715 PF00072 Response regulator receiver domain FA584_01720 PF00072 Response regulator receiver domain FA584_01725 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FA584_01725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA584_01725 PF00072 Response regulator receiver domain FA584_01725 PF01627 Hpt domain FA584_01725 PF00672 HAMP domain FA584_01725 PF00512 His Kinase A (phospho-acceptor) domain FA584_01730 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain FA584_01730 PF10996 Beta-Casp domain FA584_01730 PF00753 Metallo-beta-lactamase superfamily FA584_01735 PF00501 AMP-binding enzyme FA584_01745 PF07715 TonB-dependent Receptor Plug Domain FA584_01745 PF00593 TonB dependent receptor FA584_01750 PF02386 Cation transport protein FA584_01755 PF02254 TrkA-N domain FA584_01755 PF02080 TrkA-C domain FA584_01760 PF01641 SelR domain FA584_01765 PF00571 CBS domain FA584_01765 PF03471 Transporter associated domain FA584_01765 PF01595 Cyclin M transmembrane N-terminal domain FA584_01770 PF13456 Reverse transcriptase-like FA584_01770 PF00300 Histidine phosphatase superfamily (branch 1) FA584_01775 PF12804 MobA-like NTP transferase domain FA584_01780 PF13478 XdhC Rossmann domain FA584_01780 PF02625 XdhC and CoxI family FA584_01785 PF00501 AMP-binding enzyme FA584_01785 PF14535 AMP-binding enzyme C-terminal domain FA584_01800 PF08241 Methyltransferase domain FA584_01810 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FA584_01810 PF07992 Pyridine nucleotide-disulphide oxidoreductase FA584_01810 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FA584_01815 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FA584_01815 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FA584_01815 PF00111 2Fe-2S iron-sulfur cluster binding domain FA584_01815 PF01799 [2Fe-2S] binding domain FA584_01820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA584_01820 PF00072 Response regulator receiver domain FA584_01820 PF00512 His Kinase A (phospho-acceptor) domain FA584_01820 PF00497 Bacterial extracellular solute-binding proteins, family 3 FA584_01825 PF00072 Response regulator receiver domain FA584_01825 PF00486 Transcriptional regulatory protein, C terminal FA584_01825 PF01627 Hpt domain FA584_01830 PF14437 MafB19-like deaminase FA584_01840 PF02146 Sir2 family FA584_01850 PF02574 Homocysteine S-methyltransferase FA584_01850 PF00809 Pterin binding enzyme FA584_01850 PF02965 Vitamin B12 dependent methionine synthase, activation domain FA584_01850 PF02607 B12 binding domain FA584_01850 PF02310 B12 binding domain FA584_01855 PF13458 Periplasmic binding protein FA584_01860 PF13458 Periplasmic binding protein FA584_01865 PF02743 Cache domain FA584_01865 PF00672 HAMP domain FA584_01865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA584_01870 PF01810 LysE type translocator FA584_01875 PF00892 EamA-like transporter family FA584_01880 PF02743 Cache domain FA584_01880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA584_01880 PF00672 HAMP domain FA584_01885 PF00884 Sulfatase FA584_01890 PF00909 Ammonium Transporter Family FA584_01895 PF00543 Nitrogen regulatory protein P-II FA584_01910 PF00072 Response regulator receiver domain FA584_01910 PF01966 HD domain FA584_01915 PF02092 Glycyl-tRNA synthetase beta subunit FA584_01930 PF00484 Carbonic anhydrase FA584_01935 PF06865 Pyrimidine/purine nucleoside phosphorylase FA584_01940 PF00563 EAL domain FA584_01940 PF03707 Bacterial signalling protein N terminal repeat FA584_01940 PF00990 Diguanylate cyclase, GGDEF domain FA584_01955 PF00588 SpoU rRNA Methylase family FA584_01960 PF00551 Formyl transferase FA584_01960 PF01842 ACT domain FA584_01965 PF13735 tRNA nucleotidyltransferase domain 2 putative FA584_01965 PF12627 Probable RNA and SrmB- binding site of polymerase A FA584_01965 PF01743 Poly A polymerase head domain FA584_01980 PF00180 Isocitrate/isopropylmalate dehydrogenase FA584_01985 PF00694 Aconitase C-terminal domain FA584_02000 PF00005 ABC transporter FA584_02005 PF00873 AcrB/AcrD/AcrF family FA584_02020 PF02040 Arsenical pump membrane protein FA584_02035 PF03372 Endonuclease/Exonuclease/phosphatase family FA584_02055 PF09297 NADH pyrophosphatase zinc ribbon domain FA584_02055 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain FA584_02055 PF00293 NUDIX domain FA584_02060 PF00174 Oxidoreductase molybdopterin binding domain FA584_02065 PF01794 Ferric reductase like transmembrane component FA584_02070 PF13474 SnoaL-like domain FA584_02085 PF00672 HAMP domain FA584_02085 PF02743 Cache domain FA584_02085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA584_02090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA584_02090 PF02743 Cache domain FA584_02090 PF00672 HAMP domain FA584_02100 PF03358 NADPH-dependent FMN reductase FA584_02105 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) FA584_02110 PF00990 Diguanylate cyclase, GGDEF domain FA584_02110 PF08448 PAS fold FA584_02120 PF09962 Uncharacterized conserved protein (DUF2196) FA584_02125 PF09382 RQC domain FA584_02125 PF16124 RecQ zinc-binding FA584_02125 PF00271 Helicase conserved C-terminal domain FA584_02125 PF00270 DEAD/DEAH box helicase FA584_02125 PF00570 HRDC domain FA584_02140 PF00270 DEAD/DEAH box helicase FA584_02140 PF00271 Helicase conserved C-terminal domain FA584_02155 PF00486 Transcriptional regulatory protein, C terminal FA584_02155 PF00072 Response regulator receiver domain FA584_02200 PF00285 Citrate synthase, C-terminal domain FA584_02205 PF03972 MmgE/PrpD family FA584_02215 PF03831 PhnA domain FA584_02215 PF08274 PhnA Zinc-Ribbon FA584_02225 PF03591 AzlC protein FA584_02230 PF00460 Flagella basal body rod protein FA584_02230 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FA584_02235 PF00460 Flagella basal body rod protein FA584_02235 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FA584_02240 PF04539 Sigma-70 region 3 FA584_02240 PF04545 Sigma-70, region 4 FA584_02240 PF04542 Sigma-70 region 2 FA584_02240 PF00140 Sigma-70 factor, region 1.2 FA584_02250 PF01638 HxlR-like helix-turn-helix FA584_02265 PF03824 High-affinity nickel-transport protein FA584_02270 PF00005 ABC transporter FA584_02275 PF00950 ABC 3 transport family FA584_02280 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment FA584_02280 PF01297 Zinc-uptake complex component A periplasmic FA584_02295 PF00501 AMP-binding enzyme FA584_02295 PF13193 AMP-binding enzyme C-terminal domain FA584_02295 PF16177 Acetyl-coenzyme A synthetase N-terminus FA584_02300 PF00474 Sodium:solute symporter family FA584_02305 PF04341 Protein of unknown function, DUF485 FA584_02310 PF00486 Transcriptional regulatory protein, C terminal FA584_02310 PF00072 Response regulator receiver domain FA584_02315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA584_02320 PF04371 Porphyromonas-type peptidyl-arginine deiminase FA584_02325 PF16916 Dimerisation domain of Zinc Transporter FA584_02325 PF01545 Cation efflux family FA584_02330 PF07664 Ferrous iron transport protein B C terminus FA584_02330 PF02421 Ferrous iron transport protein B FA584_02330 PF07670 Nucleoside recognition FA584_02335 PF04023 FeoA domain FA584_02340 PF00795 Carbon-nitrogen hydrolase FA584_02365 PF03459 TOBE domain FA584_02370 PF00293 NUDIX domain FA584_02375 PF01544 CorA-like Mg2+ transporter protein FA584_02380 PF04225 Opacity-associated protein A LysM-like domain FA584_02380 PF01551 Peptidase family M23 FA584_02385 PF15436 Plasminogen-binding protein pgbA N-terminal FA584_02385 PF15437 Plasminogen-binding protein pgbA C-terminal FA584_02390 PF01565 FAD binding domain FA584_02390 PF02913 FAD linked oxidases, C-terminal domain FA584_02395 PF03631 Virulence factor BrkB FA584_02405 PF03796 DnaB-like helicase C terminal domain FA584_02405 PF00772 DnaB-like helicase N terminal domain FA584_02410 PF04551 GcpE protein FA584_02415 PF18319 PriA DNA helicase Cys-rich region (CRR) domain FA584_02415 PF00271 Helicase conserved C-terminal domain FA584_02415 PF18074 Primosomal protein N C-terminal domain FA584_02415 PF17764 3′ DNA-binding domain (3′BD) FA584_02415 PF00270 DEAD/DEAH box helicase FA584_02420 PF00114 Pilin (bacterial filament) FA584_02420 PF07963 Prokaryotic N-terminal methylation motif FA584_02440 PF02151 UvrB/uvrC motif FA584_02440 PF12344 Ultra-violet resistance protein B FA584_02440 PF17757 UvrB interaction domain FA584_02440 PF04851 Type III restriction enzyme, res subunit FA584_02440 PF00271 Helicase conserved C-terminal domain FA584_02450 PF13089 Polyphosphate kinase N-terminal domain FA584_02450 PF17941 Polyphosphate kinase C-terminal domain 1 FA584_02450 PF13090 Polyphosphate kinase C-terminal domain 2 FA584_02450 PF02503 Polyphosphate kinase middle domain FA584_02455 PF00132 Bacterial transferase hexapeptide (six repeats) FA584_02460 PF14579 Helix-hairpin-helix motif FA584_02460 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FA584_02460 PF00929 Exonuclease FA584_02460 PF07733 Bacterial DNA polymerase III alpha NTPase domain FA584_02460 PF02811 PHP domain FA584_02465 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FA584_02470 PF00834 Ribulose-phosphate 3 epimerase family FA584_02475 PF00830 Ribosomal L28 family FA584_02480 PF01960 ArgJ family FA584_02495 PF13277 YmdB-like protein FA584_02500 PF03461 TRCF domain FA584_02500 PF17757 UvrB interaction domain FA584_02500 PF02559 CarD-like/TRCF domain FA584_02500 PF00270 DEAD/DEAH box helicase FA584_02500 PF00271 Helicase conserved C-terminal domain FA584_02510 PF01551 Peptidase family M23 FA584_02510 PF04225 Opacity-associated protein A LysM-like domain FA584_02515 PF08245 Mur ligase middle domain FA584_02520 PF00990 Diguanylate cyclase, GGDEF domain FA584_02520 PF07694 5TMR of 5TMR-LYT FA584_02530 PF13603 Leucyl-tRNA synthetase, Domain 2 FA584_02530 PF09334 tRNA synthetases class I (M) FA584_02530 PF00133 tRNA synthetases class I (I, L, M and V) FA584_02535 PF02355 Protein export membrane protein FA584_02535 PF07549 SecD/SecF GG Motif FA584_02540 PF02355 Protein export membrane protein FA584_02545 PF02699 Preprotein translocase subunit FA584_02555 PF02773 S-adenosylmethionine synthetase, C-terminal domain FA584_02555 PF00438 S-adenosylmethionine synthetase, N-terminal domain FA584_02555 PF02772 S-adenosylmethionine synthetase, central domain FA584_02565 PF03588 Leucyl/phenylalanyl-tRNA protein transferase FA584_02570 PF07724 AAA domain (Cdc48 subfamily) FA584_02570 PF10431 C-terminal, D2-small domain, of ClpB protein FA584_02570 PF02861 Clp amino terminal domain, pathogenicity island component FA584_02570 PF17871 AAA lid domain FA584_02570 PF00004 ATPase family associated with various cellular activities (AAA) FA584_02575 PF02617 ATP-dependent Clp protease adaptor protein ClpS FA584_02585 PF01668 SmpB protein FA584_02590 PF00288 GHMP kinases N terminal domain FA584_02595 PF02599 Global regulator protein family FA584_02600 PF01509 TruB family pseudouridylate synthase (N terminal domain) FA584_02605 PF00580 UvrD/REP helicase N-terminal domain FA584_02605 PF13361 UvrD-like helicase C-terminal domain FA584_02610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FA584_02610 PF03466 LysR substrate binding domain FA584_02630 PF00425 chorismate binding enzyme FA584_02635 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FA584_02635 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FA584_02660 PF00392 Bacterial regulatory proteins, gntR family FA584_02660 PF00155 Aminotransferase class I and II FA584_02675 PF01782 RimM N-terminal domain FA584_02685 PF00886 Ribosomal protein S16 FA584_02690 PF00448 SRP54-type protein, GTPase domain FA584_02690 PF02978 Signal peptide binding domain FA584_02690 PF02881 SRP54-type protein, helical bundle domain FA584_02695 PF00849 RNA pseudouridylate synthase FA584_02700 PF00534 Glycosyl transferases group 1 FA584_02700 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) FA584_02710 PF01784 NIF3 (NGG1p interacting factor 3) FA584_02715 PF02091 Glycyl-tRNA synthetase alpha subunit FA584_02725 PF00731 AIR carboxylase FA584_02740 PF02811 PHP domain FA584_02745 PF03951 Glutamine synthetase, beta-Grasp domain FA584_02745 PF00120 Glutamine synthetase, catalytic domain FA584_02750 PF17092 Penicillin-binding protein OB-like domain FA584_02750 PF00905 Penicillin binding protein transpeptidase domain FA584_02750 PF00912 Transglycosylase FA584_02755 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FA584_02755 PF00005 ABC transporter FA584_02760 PF00155 Aminotransferase class I and II FA584_02765 PF02545 Maf-like protein FA584_02775 PF01411 tRNA synthetases class II (A) FA584_02775 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FA584_02775 PF02272 DHHA1 domain FA584_02805 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FA584_02815 PF00762 Ferrochelatase FA584_02820 PF00905 Penicillin binding protein transpeptidase domain FA584_02820 PF03717 Penicillin-binding Protein dimerisation domain FA584_02825 PF02049 Flagellar hook-basal body complex protein FliE FA584_02830 PF00460 Flagella basal body rod protein FA584_02830 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FA584_02835 PF00460 Flagella basal body rod protein FA584_02840 PF01098 Cell cycle protein FA584_02845 PF04101 Glycosyltransferase family 28 C-terminal domain FA584_02845 PF03033 Glycosyltransferase family 28 N-terminal domain FA584_02950 PF07670 Nucleoside recognition FA584_02960 PF00892 EamA-like transporter family FA584_03025 PF00117 Glutamine amidotransferase class-I FA584_03040 PF09827 CRISPR associated protein Cas2 FA584_03050 PF01867 CRISPR associated protein Cas1 FA584_03055 PF00665 Integrase core domain FA584_03055 PF02796 Helix-turn-helix domain of resolvase FA584_03060 PF01695 IstB-like ATP binding protein FA584_03180 PF01145 SPFH domain / Band 7 family FA584_03205 PF07690 Major Facilitator Superfamily FA584_03210 PF01553 Acyltransferase FA584_03210 PF00501 AMP-binding enzyme FA584_03215 PF01022 Bacterial regulatory protein, arsR family FA584_03225 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase FA584_03230 PF04223 Citrate lyase, alpha subunit (CitF) FA584_03235 PF03328 HpcH/HpaI aldolase/citrate lyase family FA584_03240 PF06857 Malonate decarboxylase delta subunit (MdcD) FA584_03245 PF00583 Acetyltransferase (GNAT) family FA584_03245 PF08218 Citrate lyase ligase C-terminal domain FA584_03255 PF07690 Major Facilitator Superfamily FA584_03265 PF00860 Permease family FA584_03270 PF04055 Radical SAM superfamily FA584_03280 PF02463 RecF/RecN/SMC N terminal domain FA584_03290 PF00291 Pyridoxal-phosphate dependent enzyme FA584_03300 PF01966 HD domain FA584_03300 PF08335 GlnD PII-uridylyltransferase FA584_03300 PF01842 ACT domain FA584_03300 PF01909 Nucleotidyltransferase domain FA584_03305 PF01380 SIS domain FA584_03310 PF00990 Diguanylate cyclase, GGDEF domain FA584_03330 PF13426 PAS domain FA584_03330 PF00990 Diguanylate cyclase, GGDEF domain FA584_03330 PF00563 EAL domain FA584_03340 PF00520 Ion transport protein FA584_03340 PF00027 Cyclic nucleotide-binding domain FA584_03360 PF00005 ABC transporter FA584_03360 PF12848 ABC transporter FA584_03370 PF00072 Response regulator receiver domain FA584_03370 PF00486 Transcriptional regulatory protein, C terminal FA584_03375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA584_03375 PF08447 PAS fold FA584_03375 PF08448 PAS fold FA584_03380 PF13247 4Fe-4S dicluster domain FA584_03385 PF03063 Prismane/CO dehydrogenase family FA584_03390 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FA584_03395 PF13247 4Fe-4S dicluster domain FA584_03405 PF00146 NADH dehydrogenase FA584_03410 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FA584_03415 PF00361 Proton-conducting membrane transporter FA584_03415 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FA584_03420 PF00374 Nickel-dependent hydrogenase FA584_03420 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FA584_03420 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FA584_03430 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FA584_03465 PF00899 ThiF family FA584_03470 PF00072 Response regulator receiver domain FA584_03470 PF00990 Diguanylate cyclase, GGDEF domain FA584_03480 PF14602 Hexapeptide repeat of succinyl-transferase FA584_03480 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle FA584_03485 PF01883 Iron-sulfur cluster assembly protein FA584_03485 PF10609 NUBPL iron-transfer P-loop NTPase FA584_03490 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase FA584_03490 PF02542 YgbB family FA584_03500 PF14306 PUA-like domain FA584_03500 PF01747 ATP-sulfurylase FA584_03510 PF04264 YceI-like domain FA584_03515 PF01205 Uncharacterized protein family UPF0029 FA584_03515 PF09186 Domain of unknown function (DUF1949) FA584_03520 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain FA584_03520 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain FA584_03535 PF00005 ABC transporter FA584_03535 PF08402 TOBE domain FA584_03540 PF00528 Binding-protein-dependent transport system inner membrane component FA584_03555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FA584_03555 PF03459 TOBE domain FA584_03560 PF07943 Penicillin-binding protein 5, C-terminal domain FA584_03560 PF00768 D-alanyl-D-alanine carboxypeptidase FA584_03565 PF14748 Pyrroline-5-carboxylate reductase dimerisation FA584_03565 PF03807 NADP oxidoreductase coenzyme F420-dependent FA584_03570 PF00005 ABC transporter FA584_03570 PF12704 MacB-like periplasmic core domain FA584_03570 PF02687 FtsX-like permease family FA584_03575 PF00005 ABC transporter FA584_03600 PF00924 Mechanosensitive ion channel FA584_03600 PF05552 Conserved TM helix FA584_03605 PF03707 Bacterial signalling protein N terminal repeat FA584_03605 PF00563 EAL domain FA584_03605 PF00990 Diguanylate cyclase, GGDEF domain FA584_03730 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FA584_03735 PF01029 NusB family FA584_03740 PF00885 6,7-dimethyl-8-ribityllumazine synthase FA584_03750 PF00793 DAHP synthetase I family FA584_03755 PF00892 EamA-like transporter family FA584_03760 PF00924 Mechanosensitive ion channel FA584_03765 PF01926 50S ribosome-binding GTPase FA584_03765 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FA584_03770 PF01202 Shikimate kinase FA584_03775 PF00579 tRNA synthetases class I (W and Y) FA584_03780 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FA584_03780 PF02403 Seryl-tRNA synthetase N-terminal domain FA584_03790 PF08502 LeuA allosteric (dimerisation) domain FA584_03790 PF00682 HMGL-like FA584_03795 PF01066 CDP-alcohol phosphatidyltransferase FA584_03805 PF00004 ATPase family associated with various cellular activities (AAA) FA584_03805 PF17862 AAA+ lid domain FA584_03805 PF01434 Peptidase family M41 FA584_03815 PF00072 Response regulator receiver domain FA584_03820 PF00977 Histidine biosynthesis protein FA584_03825 PF00117 Glutamine amidotransferase class-I FA584_03835 PF18527 STT3/PglB C-terminal beta-barrel domain FA584_03835 PF02516 Oligosaccharyl transferase STT3 subunit FA584_03845 PF00953 Glycosyl transferase family 4 FA584_03850 PF01370 NAD dependent epimerase/dehydratase family FA584_03855 PF00535 Glycosyl transferase family 2 FA584_03860 PF01501 Glycosyl transferase family 8 FA584_03860 PF00535 Glycosyl transferase family 2 FA584_03865 PF00535 Glycosyl transferase family 2 FA584_03870 PF14602 Hexapeptide repeat of succinyl-transferase FA584_03870 PF12464 Maltose acetyltransferase FA584_03875 PF00535 Glycosyl transferase family 2 FA584_03885 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FA584_03895 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FA584_03895 PF00205 Thiamine pyrophosphate enzyme, central domain FA584_03895 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FA584_03900 PF16363 GDP-mannose 4,6 dehydratase FA584_03905 PF00483 Nucleotidyl transferase FA584_03910 PF04321 RmlD substrate binding domain FA584_03915 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase FA584_03920 PF14743 DNA ligase OB-like domain FA584_03920 PF01068 ATP dependent DNA ligase domain FA584_03925 PF16363 GDP-mannose 4,6 dehydratase FA584_03930 PF00483 Nucleotidyl transferase FA584_03935 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FA584_03935 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FA584_03935 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FA584_03935 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FA584_03945 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FA584_03960 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FA584_03980 PF13580 SIS domain FA584_03985 PF01467 Cytidylyltransferase-like FA584_03985 PF00294 pfkB family carbohydrate kinase FA584_03990 PF01370 NAD dependent epimerase/dehydratase family FA584_03995 PF08645 Polynucleotide kinase 3 phosphatase FA584_04015 PF00403 Heavy-metal-associated domain FA584_04025 PF00892 EamA-like transporter family FA584_04040 PF00990 Diguanylate cyclase, GGDEF domain FA584_04040 PF17158 Membrane-associated sensor, integral membrane domain FA584_04045 PF08534 Redoxin FA584_04060 PF00677 Lumazine binding domain FA584_04065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA584_04065 PF00672 HAMP domain FA584_04065 PF02743 Cache domain FA584_04070 PF02626 Carboxyltransferase domain, subdomain A and B FA584_04080 PF03746 LamB/YcsF family FA584_04085 PF01134 Glucose inhibited division protein A FA584_04085 PF13932 GidA associated domain FA584_04090 PF00355 Rieske [2Fe-2S] domain FA584_04090 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal FA584_04095 PF00032 Cytochrome b(C-terminal)/b6/petD FA584_04095 PF00033 Cytochrome b/b6/petB FA584_04100 PF02167 Cytochrome C1 family FA584_04110 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FA584_04115 PF02801 Beta-ketoacyl synthase, C-terminal domain FA584_04115 PF00109 Beta-ketoacyl synthase, N-terminal domain FA584_04120 PF00550 Phosphopantetheine attachment site FA584_04130 PF01676 Metalloenzyme superfamily FA584_04130 PF06415 BPG-independent PGAM N-terminus (iPGM_N) FA584_04135 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 FA584_04135 PF00953 Glycosyl transferase family 4 FA584_04140 PF08245 Mur ligase middle domain FA584_04150 PF02397 Bacterial sugar transferase FA584_04155 PF00534 Glycosyl transferases group 1 FA584_04155 PF13439 Glycosyltransferase Family 4 FA584_04160 PF13439 Glycosyltransferase Family 4 FA584_04160 PF00534 Glycosyl transferases group 1 FA584_04165 PF01370 NAD dependent epimerase/dehydratase family FA584_04170 PF16363 GDP-mannose 4,6 dehydratase FA584_04190 PF00535 Glycosyl transferase family 2 FA584_04200 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FA584_04205 PF00550 Phosphopantetheine attachment site FA584_04210 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FA584_04210 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FA584_04220 PF05523 WxcM-like, C-terminal FA584_04230 PF16363 GDP-mannose 4,6 dehydratase FA584_04235 PF00483 Nucleotidyl transferase FA584_04245 PF13847 Methyltransferase domain FA584_04245 PF00069 Protein kinase domain FA584_04250 PF00005 ABC transporter FA584_04260 PF00483 Nucleotidyl transferase FA584_04260 PF01050 Mannose-6-phosphate isomerase FA584_04265 PF16363 GDP-mannose 4,6 dehydratase FA584_04270 PF01568 Molydopterin dinucleotide binding domain FA584_04270 PF00384 Molybdopterin oxidoreductase FA584_04270 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FA584_04280 PF13247 4Fe-4S dicluster domain FA584_04285 PF08447 PAS fold FA584_04285 PF08448 PAS fold FA584_04285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA584_04290 PF00072 Response regulator receiver domain FA584_04290 PF00486 Transcriptional regulatory protein, C terminal FA584_04305 PF09335 SNARE associated Golgi protein FA584_04310 PF12792 CSS motif domain associated with EAL FA584_04310 PF00563 EAL domain FA584_04325 PF03649 Uncharacterised protein family (UPF0014) FA584_04330 PF02785 Biotin carboxylase C-terminal domain FA584_04330 PF00289 Biotin carboxylase, N-terminal domain FA584_04330 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FA584_04345 PF00271 Helicase conserved C-terminal domain FA584_04345 PF00270 DEAD/DEAH box helicase FA584_04350 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 FA584_04355 PF00248 Aldo/keto reductase family FA584_04360 PF07690 Major Facilitator Superfamily FA584_04365 PF12833 Helix-turn-helix domain FA584_04365 PF06719 AraC-type transcriptional regulator N-terminus FA584_04370 PF12706 Beta-lactamase superfamily domain FA584_04380 PF12849 PBP superfamily domain FA584_04385 PF00528 Binding-protein-dependent transport system inner membrane component FA584_04390 PF00528 Binding-protein-dependent transport system inner membrane component FA584_04395 PF00005 ABC transporter FA584_04400 PF17202 Single cache domain 3 FA584_04400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA584_04400 PF00672 HAMP domain FA584_04405 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase FA584_04410 PF00672 HAMP domain FA584_04410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA584_04410 PF12729 Four helix bundle sensory module for signal transduction FA584_04420 PF01895 PhoU domain FA584_04425 PF00486 Transcriptional regulatory protein, C terminal FA584_04425 PF00072 Response regulator receiver domain FA584_04430 PF00989 PAS fold FA584_04430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA584_04430 PF11808 Phosphate regulon sensor protein PhoR FA584_04430 PF00512 His Kinase A (phospho-acceptor) domain FA584_04435 PF03061 Thioesterase superfamily FA584_04455 PF01638 HxlR-like helix-turn-helix FA584_04460 PF02525 Flavodoxin-like fold FA584_04465 PF02743 Cache domain FA584_04465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA584_04465 PF00512 His Kinase A (phospho-acceptor) domain FA584_04470 PF06508 Queuosine biosynthesis protein QueC FA584_04475 PF04055 Radical SAM superfamily FA584_04505 PF02562 PhoH-like protein FA584_04515 PF07690 Major Facilitator Superfamily FA584_04520 PF07690 Major Facilitator Superfamily FA584_04525 PF02321 Outer membrane efflux protein FA584_04530 PF00873 AcrB/AcrD/AcrF family FA584_04535 PF00529 HlyD membrane-fusion protein of T1SS FA584_04535 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FA584_04550 PF01243 Pyridoxamine 5'-phosphate oxidase FA584_04555 PF00375 Sodium:dicarboxylate symporter family FA584_04560 PF02664 S-Ribosylhomocysteinase (LuxS) FA584_04585 PF10371 Domain of unknown function FA584_04585 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II FA584_04585 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase FA584_04585 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg FA584_04585 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FA584_04590 PF13419 Haloacid dehalogenase-like hydrolase FA584_04595 PF00939 Sodium:sulfate symporter transmembrane region FA584_04605 PF05552 Conserved TM helix FA584_04605 PF00924 Mechanosensitive ion channel FA584_04610 PF00691 OmpA family FA584_04610 PF05736 OprF membrane domain FA584_04615 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FA584_04620 PF01161 Phosphatidylethanolamine-binding protein FA584_04625 PF12833 Helix-turn-helix domain FA584_04625 PF06719 AraC-type transcriptional regulator N-terminus FA584_04630 PF13673 Acetyltransferase (GNAT) domain FA584_04630 PF00117 Glutamine amidotransferase class-I FA584_04630 PF03352 Methyladenine glycosylase FA584_04630 PF00958 GMP synthase C terminal domain FA584_04630 PF13302 Acetyltransferase (GNAT) domain FA584_04650 PF00465 Iron-containing alcohol dehydrogenase FA584_04660 PF00654 Voltage gated chloride channel FA584_04665 PF02222 ATP-grasp domain FA584_04675 PF03091 CutA1 divalent ion tolerance protein FA584_04680 PF00380 Ribosomal protein S9/S16 FA584_04685 PF00572 Ribosomal protein L13 FA584_04690 PF12705 PD-(D/E)XK nuclease superfamily FA584_04690 PF00580 UvrD/REP helicase N-terminal domain FA584_04690 PF13361 UvrD-like helicase C-terminal domain FA584_04715 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP FA584_04715 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FA584_04730 PF00115 Cytochrome C and Quinol oxidase polypeptide I FA584_04735 PF00486 Transcriptional regulatory protein, C terminal FA584_04735 PF00072 Response regulator receiver domain FA584_04740 PF08448 PAS fold FA584_04740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA584_04740 PF08447 PAS fold FA584_04750 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain FA584_04750 PF00117 Glutamine amidotransferase class-I FA584_04770 PF00709 Adenylosuccinate synthetase FA584_04775 PF13393 Histidyl-tRNA synthetase FA584_04780 PF00266 Aminotransferase class-V FA584_04785 PF00672 HAMP domain FA584_04785 PF02743 Cache domain FA584_04785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA584_04790 PF00672 HAMP domain FA584_04790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA584_04790 PF17200 Single Cache domain 2 FA584_04795 PF13419 Haloacid dehalogenase-like hydrolase FA584_04800 PF00456 Transketolase, thiamine diphosphate binding domain FA584_04800 PF02780 Transketolase, C-terminal domain FA584_04800 PF02779 Transketolase, pyrimidine binding domain FA584_04805 PF00348 Polyprenyl synthetase FA584_04810 PF00595 PDZ domain FA584_04815 PF02575 YbaB/EbfC DNA-binding family FA584_04820 PF02261 Aspartate decarboxylase FA584_04825 PF08245 Mur ligase middle domain FA584_04825 PF02875 Mur ligase family, glutamate ligase domain FA584_04840 PF01196 Ribosomal protein L17 FA584_04845 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain FA584_04845 PF01000 RNA polymerase Rpb3/RpoA insert domain FA584_04845 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain FA584_04850 PF01479 S4 domain FA584_04850 PF00163 Ribosomal protein S4/S9 N-terminal domain FA584_04855 PF00411 Ribosomal protein S11 FA584_04860 PF00416 Ribosomal protein S13/S18 FA584_04865 PF00444 Ribosomal protein L36 FA584_04870 PF01176 Translation initiation factor 1A / IF-1 FA584_04875 PF00557 Metallopeptidase family M24 FA584_04880 PF00344 SecY translocase FA584_04885 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A FA584_04890 PF00333 Ribosomal protein S5, N-terminal domain FA584_04890 PF03719 Ribosomal protein S5, C-terminal domain FA584_04895 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast FA584_04900 PF00347 Ribosomal protein L6 FA584_04905 PF00410 Ribosomal protein S8 FA584_04910 PF00253 Ribosomal protein S14p/S29e FA584_04915 PF00281 Ribosomal protein L5 FA584_04915 PF00673 ribosomal L5P family C-terminus FA584_04920 PF00467 KOW motif FA584_04920 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 FA584_04925 PF00238 Ribosomal protein L14p/L23e FA584_04930 PF00366 Ribosomal protein S17 FA584_04935 PF00831 Ribosomal L29 protein FA584_04940 PF00252 Ribosomal protein L16p/L10e FA584_04945 PF07650 KH domain FA584_04945 PF00189 Ribosomal protein S3, C-terminal domain FA584_04950 PF00237 Ribosomal protein L22p/L17e FA584_04955 PF00203 Ribosomal protein S19 FA584_04960 PF00181 Ribosomal Proteins L2, RNA binding domain FA584_04960 PF03947 Ribosomal Proteins L2, C-terminal domain FA584_04965 PF00276 Ribosomal protein L23 FA584_04970 PF00573 Ribosomal protein L4/L1 family FA584_04975 PF00297 Ribosomal protein L3 FA584_04980 PF00338 Ribosomal protein S10p/S20e FA584_04995 PF01351 Ribonuclease HII FA584_05000 PF03239 Iron permease FTR1 family FA584_05005 PF10634 Fe2+ transport protein FA584_05025 PF12704 MacB-like periplasmic core domain FA584_05025 PF02687 FtsX-like permease family FA584_05025 PF00005 ABC transporter FA584_05045 PF07670 Nucleoside recognition FA584_05045 PF02421 Ferrous iron transport protein B FA584_05045 PF07664 Ferrous iron transport protein B C terminus FA584_05050 PF01264 Chorismate synthase FA584_05055 PF00035 Double-stranded RNA binding motif FA584_05055 PF14622 Ribonuclease-III-like FA584_05060 PF00075 RNase H FA584_05070 PF01807 CHC2 zinc finger FA584_05070 PF13662 Toprim domain FA584_05070 PF08275 DNA primase catalytic core, N-terminal domain FA584_05070 PF16730 DnaG-primase C-terminal, helicase-binding domain FA584_05075 PF00764 Arginosuccinate synthase FA584_05080 PF00072 Response regulator receiver domain FA584_05095 PF00072 Response regulator receiver domain FA584_05095 PF00672 HAMP domain FA584_05095 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FA584_05095 PF00512 His Kinase A (phospho-acceptor) domain FA584_05095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA584_05095 PF01627 Hpt domain FA584_05100 PF00512 His Kinase A (phospho-acceptor) domain FA584_05100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA584_05105 PF01339 CheB methylesterase FA584_05105 PF00072 Response regulator receiver domain FA584_05110 PF03975 CheD chemotactic sensory transduction FA584_05120 PF13613 Helix-turn-helix of DDE superfamily endonuclease FA584_05120 PF13359 DDE superfamily endonuclease FA584_05130 PF13359 DDE superfamily endonuclease FA584_05130 PF13613 Helix-turn-helix of DDE superfamily endonuclease FA584_05140 PF03705 CheR methyltransferase, all-alpha domain FA584_05140 PF01739 CheR methyltransferase, SAM binding domain FA584_05145 PF07194 P2 response regulator binding domain FA584_05145 PF01584 CheW-like domain FA584_05145 PF02895 Signal transducing histidine kinase, homodimeric domain FA584_05145 PF01627 Hpt domain FA584_05145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA584_05155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA584_05155 PF00672 HAMP domain FA584_05155 PF02203 Tar ligand binding domain homologue FA584_05160 PF01584 CheW-like domain FA584_05165 PF00072 Response regulator receiver domain FA584_05170 PF01556 DnaJ C terminal domain FA584_05170 PF00226 DnaJ domain FA584_05195 PF03824 High-affinity nickel-transport protein FA584_05200 PF03824 High-affinity nickel-transport protein FA584_05210 PF00258 Flavodoxin FA584_05220 PF01810 LysE type translocator FA584_05225 PF01370 NAD dependent epimerase/dehydratase family FA584_05225 PF08338 Domain of unknown function (DUF1731) FA584_05240 PF12704 MacB-like periplasmic core domain FA584_05240 PF00005 ABC transporter FA584_05240 PF02687 FtsX-like permease family FA584_05255 PF01810 LysE type translocator FA584_05265 PF03707 Bacterial signalling protein N terminal repeat FA584_05265 PF00563 EAL domain FA584_05265 PF00990 Diguanylate cyclase, GGDEF domain FA584_05270 PF00892 EamA-like transporter family FA584_05275 PF00486 Transcriptional regulatory protein, C terminal FA584_05275 PF00072 Response regulator receiver domain FA584_05280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA584_05280 PF00512 His Kinase A (phospho-acceptor) domain FA584_05280 PF00672 HAMP domain FA584_05285 PF00884 Sulfatase FA584_05285 PF08019 Phosphoethanolamine transferase EptA/EptB FA584_05295 PF12792 CSS motif domain associated with EAL FA584_05295 PF00563 EAL domain FA584_05310 PF02673 Bacitracin resistance protein BacA FA584_05315 PF01613 Flavin reductase like domain FA584_05320 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component FA584_05325 PF01869 BadF/BadG/BcrA/BcrD ATPase family FA584_05345 PF10415 Fumarase C C-terminus FA584_05345 PF00206 Lyase FA584_05350 PF10415 Fumarase C C-terminus FA584_05350 PF00206 Lyase FA584_05355 PF03605 Anaerobic c4-dicarboxylate membrane transporter FA584_05360 PF17763 Glutaminase/Asparaginase C-terminal domain FA584_05360 PF00710 Asparaginase, N-terminal FA584_05365 PF00989 PAS fold FA584_05365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA584_05365 PF00512 His Kinase A (phospho-acceptor) domain FA584_05370 PF00072 Response regulator receiver domain FA584_05370 PF00486 Transcriptional regulatory protein, C terminal FA584_05375 PF02492 CobW/HypB/UreG, nucleotide-binding domain FA584_05380 PF01730 UreF FA584_05385 PF05194 UreE urease accessory protein, C-terminal domain FA584_05390 PF01979 Amidohydrolase family FA584_05390 PF00449 Urease alpha-subunit, N-terminal domain FA584_05395 PF00547 Urease, gamma subunit FA584_05395 PF00699 Urease beta subunit FA584_05400 PF01774 UreD urease accessory protein FA584_05405 PF00005 ABC transporter FA584_05410 PF00005 ABC transporter FA584_05410 PF12399 Branched-chain amino acid ATP-binding cassette transporter FA584_05420 PF02653 Branched-chain amino acid transport system / permease component FA584_05430 PF00072 Response regulator receiver domain FA584_05430 PF09308 LuxQ, periplasmic FA584_05430 PF00512 His Kinase A (phospho-acceptor) domain FA584_05430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA584_05435 PF00486 Transcriptional regulatory protein, C terminal FA584_05435 PF00072 Response regulator receiver domain FA584_05440 PF00072 Response regulator receiver domain FA584_05440 PF00486 Transcriptional regulatory protein, C terminal FA584_05450 PF17863 AAA lid domain FA584_05450 PF07726 ATPase family associated with various cellular activities (AAA) FA584_05455 PF01882 Protein of unknown function DUF58 FA584_05465 PF00092 von Willebrand factor type A domain FA584_05495 PF00528 Binding-protein-dependent transport system inner membrane component FA584_05520 PF11798 IMS family HHH motif FA584_05520 PF00817 impB/mucB/samB family FA584_05520 PF11799 impB/mucB/samB family C-terminal domain FA584_05525 PF00690 Cation transporter/ATPase, N-terminus FA584_05525 PF00689 Cation transporting ATPase, C-terminus FA584_05530 PF01545 Cation efflux family FA584_05530 PF16916 Dimerisation domain of Zinc Transporter FA584_05565 PF00586 AIR synthase related protein, N-terminal domain FA584_05565 PF02769 AIR synthase related protein, C-terminal domain FA584_05570 PF01206 Sulfurtransferase TusA FA584_05580 PF00497 Bacterial extracellular solute-binding proteins, family 3 FA584_05580 PF01464 Transglycosylase SLT domain FA584_05585 PF13426 PAS domain FA584_05585 PF08448 PAS fold FA584_05585 PF08447 PAS fold FA584_05585 PF05231 MASE1 FA584_05585 PF00990 Diguanylate cyclase, GGDEF domain FA584_05585 PF00563 EAL domain FA584_05595 PF07690 Major Facilitator Superfamily FA584_05620 PF00005 ABC transporter FA584_05625 PF00528 Binding-protein-dependent transport system inner membrane component FA584_05630 PF12849 PBP superfamily domain FA584_05650 PF13247 4Fe-4S dicluster domain FA584_05670 PF07715 TonB-dependent Receptor Plug Domain FA584_05670 PF07660 Secretin and TonB N terminus short domain FA584_05670 PF00593 TonB dependent receptor FA584_05675 PF00005 ABC transporter FA584_05690 PF00296 Luciferase-like monooxygenase FA584_05710 PF02472 Biopolymer transport protein ExbD/TolR FA584_05715 PF01618 MotA/TolQ/ExbB proton channel family FA584_05720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FA584_05720 PF03459 TOBE domain FA584_05745 PF13649 Methyltransferase domain FA584_05750 PF03459 TOBE domain FA584_05755 PF17850 CysA C-terminal regulatory domain FA584_05755 PF12857 TOBE-like domain FA584_05755 PF00005 ABC transporter FA584_05760 PF00528 Binding-protein-dependent transport system inner membrane component FA584_05765 PF00528 Binding-protein-dependent transport system inner membrane component FA584_05775 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FA584_05810 PF13247 4Fe-4S dicluster domain FA584_05840 PF13493 Domain of unknown function (DUF4118) FA584_05840 PF02702 Osmosensitive K+ channel His kinase sensor domain FA584_05840 PF00512 His Kinase A (phospho-acceptor) domain FA584_05840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA584_05850 PF03841 L-seryl-tRNA selenium transferase FA584_05855 PF00009 Elongation factor Tu GTP binding domain FA584_05855 PF03144 Elongation factor Tu domain 2 FA584_05855 PF09105 Elongation factor SelB, winged helix FA584_05855 PF09106 Elongation factor SelB, winged helix FA584_05855 PF09107 Elongation factor SelB, winged helix FA584_05870 PF04264 YceI-like domain FA584_05875 PF17954 Quercetinase C-terminal cupin domain FA584_05875 PF02678 Pirin FA584_05910 PF00486 Transcriptional regulatory protein, C terminal FA584_05910 PF00072 Response regulator receiver domain FA584_05920 PF01965 DJ-1/PfpI family FA584_05925 PF07977 FabA-like domain FA584_05930 PF00535 Glycosyl transferase family 2 FA584_05960 PF16177 Acetyl-coenzyme A synthetase N-terminus FA584_05960 PF00501 AMP-binding enzyme FA584_05960 PF13193 AMP-binding enzyme C-terminal domain FA584_05970 PF12697 Alpha/beta hydrolase family FA584_05985 PF02801 Beta-ketoacyl synthase, C-terminal domain FA584_05985 PF00109 Beta-ketoacyl synthase, N-terminal domain FA584_05990 PF00550 Phosphopantetheine attachment site FA584_05995 PF00270 DEAD/DEAH box helicase FA584_05995 PF00271 Helicase conserved C-terminal domain FA584_06025 PF01841 Transglutaminase-like superfamily FA584_06035 PF02086 D12 class N6 adenine-specific DNA methyltransferase FA584_06040 PF00072 Response regulator receiver domain FA584_06045 PF01425 Amidase FA584_06050 PF01425 Amidase FA584_06060 PF00289 Biotin carboxylase, N-terminal domain FA584_06060 PF02785 Biotin carboxylase C-terminal domain FA584_06060 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FA584_06075 PF00005 ABC transporter FA584_06080 PF00528 Binding-protein-dependent transport system inner membrane component FA584_06095 PF00486 Transcriptional regulatory protein, C terminal FA584_06095 PF00072 Response regulator receiver domain FA584_06120 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FA584_06125 PF00672 HAMP domain FA584_06125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA584_06130 PF00106 short chain dehydrogenase FA584_06140 PF03435 Saccharopine dehydrogenase NADP binding domain FA584_06140 PF16653 Saccharopine dehydrogenase C-terminal domain FA584_06145 PF01725 Ham1 family FA584_06155 PF07690 Major Facilitator Superfamily FA584_06160 PF09335 SNARE associated Golgi protein FA584_06175 PF00939 Sodium:sulfate symporter transmembrane region FA584_06190 PF03454 MoeA C-terminal region (domain IV) FA584_06190 PF03453 MoeA N-terminal region (domain I and II) FA584_06190 PF00994 Probable molybdopterin binding domain FA584_06195 PF02391 MoaE protein FA584_06205 PF04324 BFD-like [2Fe-2S] binding domain FA584_06205 PF01592 NifU-like N terminal domain FA584_06205 PF01106 NifU-like domain FA584_06210 PF00266 Aminotransferase class-V FA584_06215 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FA584_06215 PF18269 T3SS EscN ATPase C-terminal domain FA584_06220 PF01227 GTP cyclohydrolase I FA584_06225 PF05697 Bacterial trigger factor protein (TF) FA584_06225 PF05698 Bacterial trigger factor protein (TF) C-terminus FA584_06225 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FA584_06230 PF00574 Clp protease FA584_06240 PF01327 Polypeptide deformylase FA584_06245 PF01078 Magnesium chelatase, subunit ChlI FA584_06245 PF13335 Magnesium chelatase, subunit ChlI C-terminal FA584_06250 PF01256 Carbohydrate kinase FA584_06250 PF03853 YjeF-related protein N-terminus FA584_06255 PF00551 Formyl transferase FA584_06260 PF05690 Thiazole biosynthesis protein ThiG FA584_06290 PF14659 Phage integrase, N-terminal SAM-like domain FA584_06290 PF00589 Phage integrase family FA584_06310 PF01420 Type I restriction modification DNA specificity domain FA584_06315 PF12161 HsdM N-terminal domain FA584_06315 PF02384 N-6 DNA Methylase FA584_06325 PF02796 Helix-turn-helix domain of resolvase FA584_06325 PF00665 Integrase core domain FA584_06330 PF01695 IstB-like ATP binding protein FA584_06365 PF11849 Domain of unknown function (DUF3369) FA584_06400 PF13533 Biotin-lipoyl like FA584_06405 PF00873 AcrB/AcrD/AcrF family FA584_06410 PF00873 AcrB/AcrD/AcrF family FA584_06415 PF02321 Outer membrane efflux protein FA584_06415 PF08139 Prokaryotic membrane lipoprotein lipid attachment site FA584_06425 PF00535 Glycosyl transferase family 2 FA584_06430 PF04794 YdjC-like protein FA584_06440 PF01569 PAP2 superfamily FA584_06455 PF00171 Aldehyde dehydrogenase family FA584_06470 PF01842 ACT domain FA584_06470 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FA584_06470 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FA584_06495 PF02743 Cache domain FA584_06495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA584_06495 PF00672 HAMP domain FA584_06500 PF09371 Tex-like protein N-terminal domain FA584_06500 PF16921 Tex protein YqgF-like domain FA584_06500 PF00575 S1 RNA binding domain FA584_06500 PF17674 HHH domain FA584_06530 PF00005 ABC transporter FA584_06535 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FA584_06545 PF00881 Nitroreductase family FA584_06590 PF02687 FtsX-like permease family FA584_06595 PF00005 ABC transporter FA584_06605 PF01915 Glycosyl hydrolase family 3 C-terminal domain FA584_06605 PF00933 Glycosyl hydrolase family 3 N terminal domain FA584_06635 PF03358 NADPH-dependent FMN reductase FA584_06640 PF01047 MarR family FA584_06645 PF00106 short chain dehydrogenase FA584_06655 PF00873 AcrB/AcrD/AcrF family FA584_06660 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FA584_06660 PF00529 HlyD membrane-fusion protein of T1SS FA584_06685 PF00563 EAL domain FA584_06685 PF03707 Bacterial signalling protein N terminal repeat FA584_06685 PF00990 Diguanylate cyclase, GGDEF domain FA584_06690 PF00072 Response regulator receiver domain FA584_06690 PF00486 Transcriptional regulatory protein, C terminal FA584_06695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA584_06705 PF01507 Phosphoadenosine phosphosulfate reductase family FA584_06710 PF01507 Phosphoadenosine phosphosulfate reductase family FA584_06715 PF00009 Elongation factor Tu GTP binding domain FA584_06725 PF00899 ThiF family FA584_06735 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FA584_06735 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FA584_06740 PF14824 Sirohaem biosynthesis protein central FA584_06740 PF10414 Sirohaem synthase dimerisation region FA584_06740 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FA584_06745 PF01053 Cys/Met metabolism PLP-dependent enzyme FA584_06775 PF00990 Diguanylate cyclase, GGDEF domain FA584_06775 PF08448 PAS fold FA584_06785 PF01451 Low molecular weight phosphotyrosine protein phosphatase FA584_06795 PF03741 Integral membrane protein TerC family FA584_06800 PF02621 Menaquinone biosynthesis FA584_06805 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FA584_06805 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FA584_06815 PF00390 Malic enzyme, N-terminal domain FA584_06815 PF03949 Malic enzyme, NAD binding domain FA584_06815 PF01515 Phosphate acetyl/butaryl transferase FA584_06820 PF00749 tRNA synthetases class I (E and Q), catalytic domain FA584_06830 PF00289 Biotin carboxylase, N-terminal domain FA584_06830 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FA584_06830 PF02785 Biotin carboxylase C-terminal domain FA584_06835 PF00364 Biotin-requiring enzyme FA584_06840 PF00692 dUTPase FA584_06860 PF17785 PUA-like domain FA584_06860 PF10672 S-adenosylmethionine-dependent methyltransferase FA584_06865 PF12146 Serine aminopeptidase, S33 FA584_06875 PF00669 Bacterial flagellin N-terminal helical region FA584_06880 PF02719 Polysaccharide biosynthesis protein FA584_06885 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FA584_06890 PF02348 Cytidylyltransferase FA584_06900 PF13649 Methyltransferase domain FA584_06905 PF08666 SAF domain FA584_06905 PF03102 NeuB family FA584_06910 PF13302 Acetyltransferase (GNAT) domain FA584_06935 PF00700 Bacterial flagellin C-terminal helical region FA584_06935 PF00669 Bacterial flagellin N-terminal helical region FA584_06935 PF00700 Bacterial flagellin C-terminal helical region FA584_06935 PF07196 Flagellin hook IN motif FA584_06935 PF00669 Bacterial flagellin N-terminal helical region FA584_06935 PF07196 Flagellin hook IN motif FA584_06940 PF01131 DNA topoisomerase FA584_06940 PF01396 Topoisomerase DNA binding C4 zinc finger FA584_06940 PF01751 Toprim domain FA584_06945 PF04055 Radical SAM superfamily FA584_06945 PF06968 Biotin and Thiamin Synthesis associated domain FA584_06950 PF00285 Citrate synthase, C-terminal domain FA584_06965 PF03952 Enolase, N-terminal domain FA584_06965 PF00113 Enolase, C-terminal TIM barrel domain FA584_06970 PF00154 recA bacterial DNA recombination protein FA584_06975 PF02621 Menaquinone biosynthesis FA584_06980 PF01313 Bacterial export proteins, family 3 FA584_06985 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FA584_06995 PF00814 Glycoprotease family FA584_07005 PF00990 Diguanylate cyclase, GGDEF domain FA584_07005 PF00563 EAL domain FA584_07005 PF03707 Bacterial signalling protein N terminal repeat FA584_07025 PF00149 Calcineurin-like phosphoesterase FA584_07030 PF01235 Sodium:alanine symporter family FA584_07035 PF00860 Permease family FA584_07040 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase FA584_07040 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain FA584_07040 PF13288 DXP reductoisomerase C-terminal domain FA584_07060 PF02595 Glycerate kinase family FA584_07065 PF02805 Metal binding domain of Ada FA584_07065 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FA584_07065 PF12833 Helix-turn-helix domain FA584_07065 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FA584_07080 PF13545 Crp-like helix-turn-helix domain FA584_07080 PF00027 Cyclic nucleotide-binding domain FA584_07090 PF00330 Aconitase family (aconitate hydratase) FA584_07095 PF12804 MobA-like NTP transferase domain FA584_07120 PF02253 Phospholipase A1 FA584_07130 PF01967 MoaC family FA584_07135 PF04359 Protein of unknown function (DUF493) FA584_07195 PF01027 Inhibitor of apoptosis-promoting Bax1 FA584_07210 PF00037 4Fe-4S binding domain FA584_07210 PF13247 4Fe-4S dicluster domain FA584_07215 PF10518 TAT (twin-arginine translocation) pathway signal sequence FA584_07215 PF00384 Molybdopterin oxidoreductase FA584_07215 PF01568 Molydopterin dinucleotide binding domain FA584_07215 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FA584_07220 PF13649 Methyltransferase domain FA584_07235 PF00211 Adenylate and Guanylate cyclase catalytic domain FA584_07240 PF01966 HD domain FA584_07245 PF03840 Preprotein translocase SecG subunit FA584_07255 PF01765 Ribosome recycling factor FA584_07260 PF00156 Phosphoribosyl transferase domain FA584_07285 PF04011 LemA family FA584_07300 PF03963 Flagellar hook capping protein - N-terminal region FA584_07305 PF07196 Flagellin hook IN motif FA584_07305 PF00460 Flagella basal body rod protein FA584_07305 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FA584_07305 PF07559 Flagellar basal body protein FlaE FA584_07310 PF00460 Flagella basal body rod protein FA584_07310 PF07559 Flagellar basal body protein FlaE FA584_07310 PF07196 Flagellin hook IN motif FA584_07310 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FA584_07315 PF02511 Thymidylate synthase complementing protein FA584_07320 PF02075 Crossover junction endodeoxyribonuclease RuvC FA584_07325 PF11638 DnaA N-terminal domain FA584_07325 PF08299 Bacterial dnaA protein helix-turn-helix FA584_07325 PF00308 Bacterial dnaA protein FA584_07330 PF02767 DNA polymerase III beta subunit, central domain FA584_07330 PF02768 DNA polymerase III beta subunit, C-terminal domain FA584_07330 PF00712 DNA polymerase III beta subunit, N-terminal domain FA584_07335 PF01751 Toprim domain FA584_07335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA584_07335 PF00986 DNA gyrase B subunit, carboxyl terminus FA584_07335 PF00204 DNA gyrase B FA584_07340 PF00990 Diguanylate cyclase, GGDEF domain FA584_07340 PF00563 EAL domain FA584_07345 PF14489 QueF-like protein FA584_07360 PF03167 Uracil DNA glycosylase superfamily FA584_07365 PF14815 NUDIX domain FA584_07365 PF00730 HhH-GPD superfamily base excision DNA repair protein FA584_07365 PF00633 Helix-hairpin-helix motif FA584_07370 PF07690 Major Facilitator Superfamily FA584_07380 PF05681 Fumarate hydratase (Fumerase) FA584_07385 PF05683 Fumarase C-terminus FA584_07395 PF00330 Aconitase family (aconitate hydratase) FA584_07400 PF00694 Aconitase C-terminal domain FA584_07430 PF02796 Helix-turn-helix domain of resolvase FA584_07430 PF00665 Integrase core domain FA584_07450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA584_07460 PF02080 TrkA-C domain FA584_07460 PF06826 Predicted Permease Membrane Region FA584_07470 PF00857 Isochorismatase family FA584_07475 PF00440 Bacterial regulatory proteins, tetR family FA584_07475 PF16925 Tetracyclin repressor-like, C-terminal domain FA584_07490 PF06445 GyrI-like small molecule binding domain FA584_07490 PF12833 Helix-turn-helix domain FA584_07495 PF08241 Methyltransferase domain FA584_07500 PF01875 Memo-like protein FA584_07510 PF01871 AMMECR1 FA584_07535 PF12833 Helix-turn-helix domain FA584_07545 PF05728 Uncharacterised protein family (UPF0227) FA584_07555 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FA584_07555 PF01568 Molydopterin dinucleotide binding domain FA584_07555 PF00384 Molybdopterin oxidoreductase FA584_07555 PF12838 4Fe-4S dicluster domain FA584_07555 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FA584_07585 PF00920 Dehydratase family FA584_07590 PF01914 MarC family integral membrane protein FA584_07600 PF00483 Nucleotidyl transferase FA584_07605 PF06418 CTP synthase N-terminus FA584_07605 PF00117 Glutamine amidotransferase class-I FA584_07610 PF02272 DHHA1 domain FA584_07610 PF17768 RecJ OB domain FA584_07610 PF01368 DHH family FA584_07620 PF00795 Carbon-nitrogen hydrolase FA584_07625 PF00268 Ribonucleotide reductase, small chain FA584_07640 PF13597 Anaerobic ribonucleoside-triphosphate reductase FA584_07640 PF03477 ATP cone domain FA584_07645 PF01177 Asp/Glu/Hydantoin racemase FA584_07650 PF00317 Ribonucleotide reductase, all-alpha domain FA584_07650 PF02867 Ribonucleotide reductase, barrel domain FA584_07650 PF03477 ATP cone domain FA584_07655 PF00206 Lyase FA584_07655 PF10397 Adenylosuccinate lyase C-terminus FA584_07660 PF00849 RNA pseudouridylate synthase FA584_07665 PF01557 Fumarylacetoacetate (FAA) hydrolase family FA584_07670 PF04055 Radical SAM superfamily FA584_07680 PF00977 Histidine biosynthesis protein FA584_07685 PF00398 Ribosomal RNA adenine dimethylase FA584_07690 PF00753 Metallo-beta-lactamase superfamily FA584_07690 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain FA584_07690 PF17770 Ribonuclease J C-terminal domain FA584_07695 PF01380 SIS domain FA584_07695 PF00571 CBS domain FA584_07700 PF00849 RNA pseudouridylate synthase FA584_07700 PF01479 S4 domain FA584_07705 PF05496 Holliday junction DNA helicase RuvB P-loop domain FA584_07705 PF01661 Macro domain FA584_07705 PF16193 AAA C-terminal domain FA584_07705 PF12002 MgsA AAA+ ATPase C terminal FA584_07715 PF01312 FlhB HrpN YscU SpaS Family FA584_07730 PF00586 AIR synthase related protein, N-terminal domain FA584_07730 PF02769 AIR synthase related protein, C-terminal domain FA584_07735 PF01121 Dephospho-CoA kinase FA584_07740 PF01678 Diaminopimelate epimerase FA584_07750 PF03462 PCRF domain FA584_07750 PF00472 RF-1 domain FA584_07755 PF01649 Ribosomal protein S20 FA584_07760 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FA584_07760 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FA584_07760 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FA584_07760 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FA584_07765 PF01252 Signal peptidase (SPase) II FA584_07775 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FA584_07775 PF03129 Anticodon binding domain FA584_07775 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FA584_07780 PF00707 Translation initiation factor IF-3, C-terminal domain FA584_07780 PF05198 Translation initiation factor IF-3, N-terminal domain FA584_07785 PF01632 Ribosomal protein L35 FA584_07790 PF00453 Ribosomal protein L20 FA584_07795 PF13746 4Fe-4S dicluster domain FA584_07795 PF12801 4Fe-4S binding domain FA584_07795 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase FA584_07805 PF01165 Ribosomal protein S21 FA584_07820 PF03738 Glutathionylspermidine synthase preATP-grasp FA584_07825 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FA584_07825 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FA584_07830 PF04461 Protein of unknown function (DUF520) FA584_07840 PF08019 Phosphoethanolamine transferase EptA/EptB FA584_07840 PF00884 Sulfatase FA584_07870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA584_07875 PF00072 Response regulator receiver domain FA584_07875 PF00486 Transcriptional regulatory protein, C terminal FA584_07895 PF00005 ABC transporter FA584_07900 PF02405 Permease MlaE FA584_07905 PF01625 Peptide methionine sulfoxide reductase FA584_07915 PF01914 MarC family integral membrane protein FA584_07920 PF17200 Single Cache domain 2 FA584_07920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA584_07920 PF00672 HAMP domain FA584_07930 PF11849 Domain of unknown function (DUF3369) FA584_07950 PF13426 PAS domain FA584_07950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA584_07950 PF13188 PAS domain FA584_07950 PF00989 PAS fold FA584_07950 PF00512 His Kinase A (phospho-acceptor) domain FA584_07955 PF00486 Transcriptional regulatory protein, C terminal FA584_07955 PF00072 Response regulator receiver domain FA584_07960 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FA584_07965 PF00543 Nitrogen regulatory protein P-II FA584_07970 PF00909 Ammonium Transporter Family FA584_07975 PF00248 Aldo/keto reductase family FA584_07985 PF00486 Transcriptional regulatory protein, C terminal FA584_07985 PF00072 Response regulator receiver domain FA584_08000 PF01695 IstB-like ATP binding protein FA584_08010 PF02796 Helix-turn-helix domain of resolvase FA584_08010 PF00665 Integrase core domain FA584_08025 PF00528 Binding-protein-dependent transport system inner membrane component FA584_08030 PF00497 Bacterial extracellular solute-binding proteins, family 3 FA584_08035 PF00005 ABC transporter FA584_08065 PF01261 Xylose isomerase-like TIM barrel FA584_08075 PF00501 AMP-binding enzyme FA584_08075 PF13193 AMP-binding enzyme C-terminal domain FA584_08080 PF17862 AAA+ lid domain FA584_08080 PF06480 FtsH Extracellular FA584_08080 PF01434 Peptidase family M41 FA584_08080 PF00004 ATPase family associated with various cellular activities (AAA) FA584_08085 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 FA584_08090 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FA584_08095 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FA584_08100 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FA584_08115 PF01568 Molydopterin dinucleotide binding domain FA584_08115 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FA584_08115 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FA584_08115 PF13237 4Fe-4S dicluster domain FA584_08115 PF00384 Molybdopterin oxidoreductase FA584_08120 PF00146 NADH dehydrogenase FA584_08125 PF12838 4Fe-4S dicluster domain FA584_08130 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 FA584_08135 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FA584_08140 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FA584_08140 PF00361 Proton-conducting membrane transporter FA584_08145 PF00361 Proton-conducting membrane transporter FA584_08145 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus FA584_08150 PF00361 Proton-conducting membrane transporter FA584_08160 PF00171 Aldehyde dehydrogenase family FA584_08170 PF01040 UbiA prenyltransferase family FA584_08185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA584_08185 PF00672 HAMP domain FA584_08185 PF16591 Helical bimodular sensor domain FA584_08190 PF08447 PAS fold FA584_08190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA584_08195 PF04055 Radical SAM superfamily FA584_08195 PF06463 Molybdenum Cofactor Synthesis C FA584_08200 PF03454 MoeA C-terminal region (domain IV) FA584_08200 PF00994 Probable molybdopterin binding domain FA584_08200 PF03453 MoeA N-terminal region (domain I and II) FA584_08210 PF04452 RNA methyltransferase FA584_08215 PF01197 Ribosomal protein L31 FA584_08220 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FA584_08225 PF08032 RNA 2'-O ribose methyltransferase substrate binding FA584_08225 PF00588 SpoU rRNA Methylase family FA584_08240 PF00155 Aminotransferase class I and II FA584_08245 PF00742 Homoserine dehydrogenase FA584_08245 PF01842 ACT domain FA584_08245 PF03447 Homoserine dehydrogenase, NAD binding domain FA584_08250 PF02021 Uncharacterised protein family UPF0102 FA584_08255 PF00085 Thioredoxin FA584_08260 PF07992 Pyridine nucleotide-disulphide oxidoreductase FA584_08265 PF01113 Dihydrodipicolinate reductase, N-terminus FA584_08265 PF05173 Dihydrodipicolinate reductase, C-terminus FA584_08270 PF00156 Phosphoribosyl transferase domain FA584_08275 PF16199 Radical_SAM C-terminal domain FA584_08275 PF04055 Radical SAM superfamily FA584_08290 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase FA584_08290 PF01502 Phosphoribosyl-AMP cyclohydrolase FA584_08300 PF01063 Amino-transferase class IV FA584_08305 PF00171 Aldehyde dehydrogenase family FA584_08310 PF00578 AhpC/TSA family FA584_08315 PF00072 Response regulator receiver domain FA584_08315 PF00486 Transcriptional regulatory protein, C terminal FA584_08325 PF02677 Epoxyqueuosine reductase QueH FA584_08330 PF07977 FabA-like domain FA584_08335 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 FA584_08335 PF00132 Bacterial transferase hexapeptide (six repeats) FA584_08340 PF07724 AAA domain (Cdc48 subfamily) FA584_08340 PF10431 C-terminal, D2-small domain, of ClpB protein FA584_08340 PF06689 ClpX C4-type zinc finger FA584_08355 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FA584_08355 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FA584_08355 PF02142 MGS-like domain FA584_08375 PF00899 ThiF family FA584_08380 PF01975 Survival protein SurE FA584_08385 PF02684 Lipid-A-disaccharide synthetase FA584_08390 PF01272 Transcription elongation factor, GreA/GreB, C-term FA584_08390 PF03449 Transcription elongation factor, N-terminal FA584_08395 PF02774 Semialdehyde dehydrogenase, dimerisation domain FA584_08395 PF01118 Semialdehyde dehydrogenase, NAD binding domain FA584_08405 PF00072 Response regulator receiver domain FA584_08405 PF01584 CheW-like domain FA584_08410 PF01627 Hpt domain FA584_08410 PF00072 Response regulator receiver domain FA584_08410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA584_08410 PF02895 Signal transducing histidine kinase, homodimeric domain FA584_08410 PF01584 CheW-like domain FA584_08415 PF01584 CheW-like domain FA584_08435 PF00923 Transaldolase/Fructose-6-phosphate aldolase FA584_08440 PF00437 Type II/IV secretion system protein FA584_08450 PF01195 Peptidyl-tRNA hydrolase FA584_08460 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FA584_08460 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FA584_08465 PF00800 Prephenate dehydratase FA584_08465 PF01842 ACT domain FA584_08465 PF01817 Chorismate mutase type II FA584_08470 PF00155 Aminotransferase class I and II FA584_08480 PF14841 FliG middle domain FA584_08480 PF01706 FliG C-terminal domain FA584_08480 PF14842 FliG N-terminal domain FA584_08490 PF02779 Transketolase, pyrimidine binding domain FA584_08490 PF13292 1-deoxy-D-xylulose-5-phosphate synthase FA584_08490 PF02780 Transketolase, C-terminal domain FA584_08495 PF01475 Ferric uptake regulator family FA584_08500 PF10417 C-terminal domain of 1-Cys peroxiredoxin FA584_08500 PF00578 AhpC/TSA family FA584_08510 PF00037 4Fe-4S binding domain FA584_08515 PF00334 Nucleoside diphosphate kinase FA584_08525 PF01783 Ribosomal L32p protein family FA584_08530 PF02504 Fatty acid synthesis protein FA584_08535 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FA584_08535 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FA584_08540 PF07726 ATPase family associated with various cellular activities (AAA) FA584_08540 PF17863 AAA lid domain FA584_08560 PF00092 von Willebrand factor type A domain FA584_08560 PF07584 Aerotolerance regulator N-terminal FA584_08570 PF02153 Prephenate dehydrogenase FA584_08570 PF01842 ACT domain FA584_08575 PF01103 Surface antigen FA584_08575 PF07244 Surface antigen variable number repeat FA584_08585 PF00037 4Fe-4S binding domain FA584_08590 PF00512 His Kinase A (phospho-acceptor) domain FA584_08590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA584_08595 PF00072 Response regulator receiver domain FA584_08595 PF00486 Transcriptional regulatory protein, C terminal FA584_08605 PF02660 Glycerol-3-phosphate acyltransferase FA584_08610 PF02445 Quinolinate synthetase A protein FA584_08615 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain FA584_08615 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain FA584_08620 PF01312 FlhB HrpN YscU SpaS Family FA584_08635 PF03775 Septum formation inhibitor MinC, C-terminal domain FA584_08640 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase FA584_08650 PF00288 GHMP kinases N terminal domain FA584_08650 PF08544 GHMP kinases C terminal FA584_08660 PF11987 Translation-initiation factor 2 FA584_08660 PF04760 Translation initiation factor IF-2, N-terminal region FA584_08660 PF00009 Elongation factor Tu GTP binding domain FA584_08665 PF02033 Ribosome-binding factor A FA584_08670 PF02576 RimP N-terminal domain FA584_08670 PF17384 RimP C-terminal SH3 domain FA584_08675 PF01872 RibD C-terminal domain FA584_08675 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FA584_08690 PF08448 PAS fold FA584_08690 PF00990 Diguanylate cyclase, GGDEF domain FA584_08690 PF00563 EAL domain FA584_08690 PF08447 PAS fold FA584_08695 PF00313 'Cold-shock' DNA-binding domain FA584_08700 PF00672 HAMP domain FA584_08700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA584_08700 PF00512 His Kinase A (phospho-acceptor) domain FA584_08700 PF13426 PAS domain FA584_08705 PF13613 Helix-turn-helix of DDE superfamily endonuclease FA584_08705 PF13359 DDE superfamily endonuclease FA584_08710 PF13613 Helix-turn-helix of DDE superfamily endonuclease FA584_08710 PF13359 DDE superfamily endonuclease FA584_08720 PF00486 Transcriptional regulatory protein, C terminal FA584_08720 PF00072 Response regulator receiver domain FA584_08730 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FA584_08740 PF16199 Radical_SAM C-terminal domain FA584_08740 PF04055 Radical SAM superfamily FA584_08745 PF00384 Molybdopterin oxidoreductase FA584_08745 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FA584_08745 PF01568 Molydopterin dinucleotide binding domain FA584_08745 PF10518 TAT (twin-arginine translocation) pathway signal sequence FA584_08750 PF13247 4Fe-4S dicluster domain FA584_08755 PF03916 Polysulphide reductase, NrfD FA584_08760 PF08495 FIST N domain FA584_08760 PF00990 Diguanylate cyclase, GGDEF domain FA584_08760 PF00563 EAL domain FA584_08760 PF10442 FIST C domain FA584_08770 PF13247 4Fe-4S dicluster domain FA584_08775 PF03916 Polysulphide reductase, NrfD FA584_08780 PF00486 Transcriptional regulatory protein, C terminal FA584_08780 PF00072 Response regulator receiver domain FA584_08785 PF00512 His Kinase A (phospho-acceptor) domain FA584_08785 PF13426 PAS domain FA584_08785 PF00672 HAMP domain FA584_08785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA584_08795 PF04055 Radical SAM superfamily FA584_08795 PF06969 HemN C-terminal domain FA584_08820 PF02472 Biopolymer transport protein ExbD/TolR FA584_08825 PF01618 MotA/TolQ/ExbB proton channel family FA584_08830 PF02833 DHHA2 domain FA584_08830 PF01368 DHH family FA584_08845 PF01209 ubiE/COQ5 methyltransferase family FA584_08850 PF02601 Exonuclease VII, large subunit FA584_08850 PF13742 OB-fold nucleic acid binding domain FA584_08865 PF00497 Bacterial extracellular solute-binding proteins, family 3 FA584_08865 PF01464 Transglycosylase SLT domain FA584_08870 PF00665 Integrase core domain FA584_08870 PF02796 Helix-turn-helix domain of resolvase FA584_08875 PF01695 IstB-like ATP binding protein FA584_08880 PF03707 Bacterial signalling protein N terminal repeat FA584_08880 PF00990 Diguanylate cyclase, GGDEF domain FA584_08880 PF00563 EAL domain FA584_08885 PF00962 Adenosine/AMP deaminase FA584_08895 PF06719 AraC-type transcriptional regulator N-terminus FA584_08895 PF12833 Helix-turn-helix domain FA584_08900 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FA584_08905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FA584_08905 PF03466 LysR substrate binding domain FA584_08910 PF03601 Conserved hypothetical protein 698 FA584_08915 PF00255 Glutathione peroxidase FA584_08920 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) FA584_08920 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 FA584_08925 PF01343 Peptidase family S49 FA584_08930 PF01979 Amidohydrolase family FA584_08935 PF01220 Dehydroquinase class II FA584_08940 PF00557 Metallopeptidase family M24 FA584_08940 PF01321 Creatinase/Prolidase N-terminal domain FA584_08945 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FA584_08950 PF00448 SRP54-type protein, GTPase domain FA584_08955 PF10609 NUBPL iron-transfer P-loop NTPase FA584_08965 PF04539 Sigma-70 region 3 FA584_08965 PF04545 Sigma-70, region 4 FA584_08965 PF04542 Sigma-70 region 2 FA584_08970 PF02154 Flagellar motor switch protein FliM FA584_08970 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FA584_08975 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FA584_08975 PF04509 CheC-like family FA584_08990 PF00535 Glycosyl transferase family 2 FA584_08995 PF08889 WbqC-like protein family FA584_09000 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FA584_09020 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FA584_09020 PF14572 Phosphoribosyl synthetase-associated domain FA584_09025 PF03144 Elongation factor Tu domain 2 FA584_09025 PF06421 GTP-binding protein LepA C-terminus FA584_09025 PF00679 Elongation factor G C-terminus FA584_09025 PF00009 Elongation factor Tu GTP binding domain FA584_09030 PF00156 Phosphoribosyl transferase domain FA584_09035 PF00083 Sugar (and other) transporter FA584_09050 PF00521 DNA gyrase/topoisomerase IV, subunit A FA584_09050 PF03989 DNA gyrase C-terminal domain, beta-propeller FA584_09065 PF00072 Response regulator receiver domain FA584_09065 PF00158 Sigma-54 interaction domain FA584_09070 PF01118 Semialdehyde dehydrogenase, NAD binding domain FA584_09070 PF02774 Semialdehyde dehydrogenase, dimerisation domain FA584_09080 PF01208 Uroporphyrinogen decarboxylase (URO-D) FA584_09085 PF04055 Radical SAM superfamily FA584_09095 PF16868 NMT1-like family FA584_09105 PF00589 Phage integrase family FA584_09105 PF13356 Arm DNA-binding domain FA584_09115 PF13166 AAA domain FA584_09130 PF13784 Fic/DOC family N-terminal FA584_09130 PF02661 Fic/DOC family FA584_09140 PF10544 T5orf172 domain FA584_09155 PF00665 Integrase core domain FA584_09155 PF02796 Helix-turn-helix domain of resolvase FA584_09165 PF02796 Helix-turn-helix domain of resolvase FA584_09165 PF00239 Resolvase, N terminal domain FA584_09190 PF03180 NLPA lipoprotein FA584_09195 PF00005 ABC transporter FA584_09195 PF09383 NIL domain FA584_09200 PF00528 Binding-protein-dependent transport system inner membrane component FA584_09205 PF01384 Phosphate transporter family FA584_09210 PF00056 lactate/malate dehydrogenase, NAD binding domain FA584_09210 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FA584_09215 PF09364 XFP N-terminal domain FA584_09215 PF09363 XFP C-terminal domain FA584_09215 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase FA584_09270 PF00085 Thioredoxin FA584_09280 PF07286 Protein of unknown function (DUF1445) FA584_09305 PF09905 DNA-binding protein VF530 FA584_09310 PF00106 short chain dehydrogenase FA584_09315 PF13458 Periplasmic binding protein FA584_09320 PF02653 Branched-chain amino acid transport system / permease component FA584_09325 PF02653 Branched-chain amino acid transport system / permease component FA584_09325 PF11862 Domain of unknown function (DUF3382) FA584_09330 PF12399 Branched-chain amino acid ATP-binding cassette transporter FA584_09330 PF00005 ABC transporter FA584_09335 PF00005 ABC transporter FA584_09345 PF03883 Peroxide stress protein YaaA FA584_09370 PF00009 Elongation factor Tu GTP binding domain FA584_09370 PF03144 Elongation factor Tu domain 2 FA584_09370 PF03143 Elongation factor Tu C-terminal domain FA584_09375 PF00471 Ribosomal protein L33 FA584_09390 PF02357 Transcription termination factor nusG FA584_09395 PF03946 Ribosomal protein L11, N-terminal domain FA584_09395 PF00298 Ribosomal protein L11, RNA binding domain FA584_09400 PF00687 Ribosomal protein L1p/L10e family FA584_09405 PF00466 Ribosomal protein L10 FA584_09410 PF00542 Ribosomal protein L7/L12 C-terminal domain FA584_09410 PF16320 Ribosomal protein L7/L12 dimerisation domain FA584_09415 PF10385 RNA polymerase beta subunit external 1 domain FA584_09415 PF04565 RNA polymerase Rpb2, domain 3 FA584_09415 PF00562 RNA polymerase Rpb2, domain 6 FA584_09415 PF04560 RNA polymerase Rpb2, domain 7 FA584_09415 PF04563 RNA polymerase beta subunit FA584_09415 PF04561 RNA polymerase Rpb2, domain 2 FA584_09420 PF04998 RNA polymerase Rpb1, domain 5 FA584_09420 PF04997 RNA polymerase Rpb1, domain 1 FA584_09420 PF05000 RNA polymerase Rpb1, domain 4 FA584_09420 PF04983 RNA polymerase Rpb1, domain 3 FA584_09420 PF00623 RNA polymerase Rpb1, domain 2 FA584_09425 PF00164 Ribosomal protein S12/S23 FA584_09430 PF00177 Ribosomal protein S7p/S5e FA584_09435 PF00679 Elongation factor G C-terminus FA584_09435 PF03764 Elongation factor G, domain IV FA584_09435 PF00009 Elongation factor Tu GTP binding domain FA584_09435 PF03144 Elongation factor Tu domain 2 FA584_09435 PF14492 Elongation Factor G, domain II FA584_09445 PF00892 EamA-like transporter family FA584_09450 PF00248 Aldo/keto reductase family FA584_09460 PF00939 Sodium:sulfate symporter transmembrane region FA584_09465 PF01554 MatE FA584_09480 PF00072 Response regulator receiver domain FA584_09480 PF00486 Transcriptional regulatory protein, C terminal FA584_09485 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FA584_09490 PF08448 PAS fold FA584_09490 PF08447 PAS fold FA584_09490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA584_09495 PF02743 Cache domain FA584_09495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA584_09495 PF00672 HAMP domain FA584_09500 PF08447 PAS fold FA584_09500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA584_09510 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FA584_09510 PF00384 Molybdopterin oxidoreductase FA584_09510 PF01568 Molydopterin dinucleotide binding domain FA584_09510 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FA584_09515 PF00146 NADH dehydrogenase FA584_09520 PF12838 4Fe-4S dicluster domain FA584_09525 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 FA584_09530 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FA584_09535 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FA584_09535 PF00361 Proton-conducting membrane transporter FA584_09540 PF00361 Proton-conducting membrane transporter FA584_09545 PF00361 Proton-conducting membrane transporter FA584_09550 PF00990 Diguanylate cyclase, GGDEF domain FA584_09550 PF00563 EAL domain FA584_09550 PF03707 Bacterial signalling protein N terminal repeat FA584_09565 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FA584_09565 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FA584_09565 PF10531 SLBB domain FA584_09575 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FA584_09575 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FA584_09580 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FA584_09585 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 FA584_09600 PF00842 Alanine racemase, C-terminal domain FA584_09600 PF01168 Alanine racemase, N-terminal domain FA584_09620 PF02527 rRNA small subunit methyltransferase G FA584_09625 PF17202 Single cache domain 3 FA584_09625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA584_09625 PF00672 HAMP domain FA584_09635 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FA584_09635 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FA584_09640 PF01741 Large-conductance mechanosensitive channel, MscL FA584_09650 PF00925 GTP cyclohydrolase II FA584_09655 PF00490 Delta-aminolevulinic acid dehydratase FA584_09660 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FA584_09660 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FA584_09665 PF10788 Protein of unknown function (DUF2603) FA584_09675 PF02754 Cysteine-rich domain FA584_09680 PF00990 Diguanylate cyclase, GGDEF domain FA584_09680 PF00072 Response regulator receiver domain FA584_09685 PF07690 Major Facilitator Superfamily FA584_09690 PF02810 SEC-C motif FA584_09705 PF08448 PAS fold FA584_09705 PF00990 Diguanylate cyclase, GGDEF domain FA584_09710 PF01790 Prolipoprotein diacylglyceryl transferase FA584_09715 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FA584_09720 PF00890 FAD binding domain FA584_09720 PF02910 Fumarate reductase flavoprotein C-term FA584_09725 PF13085 2Fe-2S iron-sulfur cluster binding domain FA584_09725 PF13183 4Fe-4S dicluster domain FA584_09730 PF00350 Dynamin family FA584_09735 PF00350 Dynamin family FA584_09740 PF01594 AI-2E family transporter FA584_09745 PF05491 RuvB C-terminal winged helix domain FA584_09745 PF05496 Holliday junction DNA helicase RuvB P-loop domain FA584_09745 PF17864 RuvB AAA lid domain FA584_09750 PF02548 Ketopantoate hydroxymethyltransferase FA584_09760 PF00290 Tryptophan synthase alpha chain FA584_09775 PF00318 Ribosomal protein S2 FA584_09780 PF00889 Elongation factor TS FA584_09785 PF00005 ABC transporter FA584_09790 PF01311 Bacterial export proteins, family 1 FA584_09800 PF00625 Guanylate kinase FA584_09805 PF02416 mttA/Hcf106 family FA584_09810 PF00750 tRNA synthetases class I (R) FA584_09810 PF05746 DALR anticodon binding domain FA584_09810 PF03485 Arginyl tRNA synthetase N terminal domain FA584_09820 PF00563 EAL domain FA584_09820 PF00990 Diguanylate cyclase, GGDEF domain FA584_09820 PF08495 FIST N domain FA584_09820 PF10442 FIST C domain FA584_09840 PF02796 Helix-turn-helix domain of resolvase FA584_09840 PF00665 Integrase core domain FA584_09845 PF01695 IstB-like ATP binding protein FA584_09855 PF01467 Cytidylyltransferase-like FA584_09860 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FA584_09860 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FA584_09865 PF00162 Phosphoglycerate kinase FA584_09870 PF00121 Triosephosphate isomerase FA584_09880 PF00528 Binding-protein-dependent transport system inner membrane component FA584_09885 PF08529 NusA N-terminal domain FA584_09885 PF13184 NusA-like KH domain FA584_09895 PF04055 Radical SAM superfamily FA584_09895 PF01938 TRAM domain FA584_09895 PF00919 Uncharacterized protein family UPF0004 FA584_09920 PF01171 PP-loop family FA584_09925 PF04055 Radical SAM superfamily FA584_09925 PF00919 Uncharacterized protein family UPF0004 FA584_09930 PF02569 Pantoate-beta-alanine ligase FA584_09935 PF00472 RF-1 domain FA584_09935 PF03462 PCRF domain FA584_09960 PF12169 DNA polymerase III subunits gamma and tau domain III FA584_09960 PF12170 DNA polymerase III tau subunit V interacting with alpha FA584_09965 PF07497 Rho termination factor, RNA-binding domain FA584_09965 PF07498 Rho termination factor, N-terminal domain FA584_09965 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FA584_09970 PF01255 Putative undecaprenyl diphosphate synthase FA584_09975 PF03707 Bacterial signalling protein N terminal repeat FA584_09975 PF00990 Diguanylate cyclase, GGDEF domain FA584_09975 PF00563 EAL domain FA584_09980 PF03063 Prismane/CO dehydrogenase family FA584_09985 PF08212 Lipocalin-like domain FA584_09995 PF08378 Nuclease-related domain FA584_10000 PF03976 Polyphosphate kinase 2 (PPK2) FA584_10015 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal FA584_10015 PF00355 Rieske [2Fe-2S] domain FA584_10020 PF00033 Cytochrome b/b6/petB FA584_10020 PF00032 Cytochrome b(C-terminal)/b6/petD FA584_10035 PF00271 Helicase conserved C-terminal domain FA584_10035 PF00270 DEAD/DEAH box helicase FA584_10040 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding FA584_10040 PF18381 YcaO cyclodehydratase C-terminal domain FA584_10055 PF08448 PAS fold FA584_10055 PF08447 PAS fold FA584_10055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA584_10060 PF00072 Response regulator receiver domain FA584_10065 PF03480 Bacterial extracellular solute-binding protein, family 7 FA584_10085 PF02653 Branched-chain amino acid transport system / permease component FA584_10090 PF02653 Branched-chain amino acid transport system / permease component FA584_10090 PF11862 Domain of unknown function (DUF3382) FA584_10095 PF00005 ABC transporter FA584_10095 PF12399 Branched-chain amino acid ATP-binding cassette transporter FA584_10100 PF00005 ABC transporter FA584_10105 PF05140 ResB-like family FA584_10105 PF01578 Cytochrome C assembly protein FA584_10145 PF02464 Competence-damaged protein FA584_10145 PF00994 Probable molybdopterin binding domain FA584_10145 PF18146 Damage-inducible protein CinA KH domain FA584_10150 PF00133 tRNA synthetases class I (I, L, M and V) FA584_10150 PF08264 Anticodon-binding domain of tRNA FA584_10155 PF01425 Amidase FA584_10160 PF00478 IMP dehydrogenase / GMP reductase domain FA584_10160 PF00571 CBS domain FA584_10165 PF00561 alpha/beta hydrolase fold FA584_10170 PF02609 Exonuclease VII small subunit FA584_10180 PF00899 ThiF family FA584_10185 PF00155 Aminotransferase class I and II FA584_10190 PF01225 Mur ligase family, catalytic domain FA584_10190 PF02875 Mur ligase family, glutamate ligase domain FA584_10190 PF08245 Mur ligase middle domain FA584_10200 PF00488 MutS domain V FA584_10200 PF01713 Smr domain FA584_10205 PF07687 Peptidase dimerisation domain FA584_10205 PF01546 Peptidase family M20/M25/M40 FA584_10210 PF01042 Endoribonuclease L-PSP FA584_10215 PF06039 Malate:quinone oxidoreductase (Mqo) FA584_10235 PF17820 PDZ domain FA584_10235 PF01471 Putative peptidoglycan binding domain FA584_10235 PF03572 Peptidase family S41 FA584_10250 PF00224 Pyruvate kinase, barrel domain FA584_10250 PF02887 Pyruvate kinase, alpha/beta domain FA584_10250 PF00391 PEP-utilising enzyme, mobile domain FA584_10255 PF00829 Ribosomal prokaryotic L21 protein FA584_10260 PF01016 Ribosomal L27 protein FA584_10265 PF01018 GTP1/OBG FA584_10265 PF01926 50S ribosome-binding GTPase FA584_10270 PF00696 Amino acid kinase family FA584_10275 PF02911 Formyl transferase, C-terminal domain FA584_10275 PF00551 Formyl transferase FA584_10285 PF13614 AAA domain FA584_10290 PF17762 HTH domain found in ParB protein FA584_10290 PF02195 ParB-like nuclease domain FA584_10300 PF00430 ATP synthase B/B' CF(0) FA584_10305 PF00213 ATP synthase delta (OSCP) subunit FA584_10310 PF00306 ATP synthase alpha/beta chain, C terminal domain FA584_10310 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FA584_10310 PF02874 ATP synthase alpha/beta family, beta-barrel domain FA584_10315 PF00231 ATP synthase FA584_10320 PF02874 ATP synthase alpha/beta family, beta-barrel domain FA584_10320 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FA584_10325 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain FA584_10330 PF01618 MotA/TolQ/ExbB proton channel family FA584_10335 PF02472 Biopolymer transport protein ExbD/TolR FA584_10345 PF04052 TolB amino-terminal domain FA584_10350 PF01389 OmpA-like transmembrane domain FA584_10350 PF00691 OmpA family FA584_10360 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FA584_10370 PF00698 Acyl transferase domain FA584_10375 PF01048 Phosphorylase superfamily FA584_10380 PF01171 PP-loop family FA584_10395 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FA584_10395 PF07992 Pyridine nucleotide-disulphide oxidoreductase FA584_10405 PF01039 Carboxyl transferase domain FA584_10405 PF17848 Acetyl-coA carboxylase zinc finger domain FA584_10410 PF02590 Predicted SPOUT methyltransferase FA584_10415 PF01258 Prokaryotic dksA/traR C4-type zinc finger FA584_10425 PF01207 Dihydrouridine synthase (Dus) FA584_10445 PF04509 CheC-like family FA584_10445 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FA584_10455 PF02954 Bacterial regulatory protein, Fis family FA584_10455 PF00158 Sigma-54 interaction domain FA584_10475 PF03960 ArsC family FA584_10495 PF01243 Pyridoxamine 5'-phosphate oxidase FA584_10500 PF00440 Bacterial regulatory proteins, tetR family FA584_10500 PF16925 Tetracyclin repressor-like, C-terminal domain FA584_10505 PF00109 Beta-ketoacyl synthase, N-terminal domain FA584_10505 PF02801 Beta-ketoacyl synthase, C-terminal domain FA584_10510 PF08331 Domain of unknown function (DUF1730) FA584_10520 PF01047 MarR family FA584_10535 PF01964 Radical SAM ThiC family FA584_10535 PF13667 ThiC-associated domain FA584_10545 PF00324 Amino acid permease FA584_10550 PF01925 Sulfite exporter TauE/SafE FA584_10555 PF17755 UvrA DNA-binding domain FA584_10555 PF00005 ABC transporter FA584_10555 PF17760 UvrA interaction domain FA584_10560 PF00375 Sodium:dicarboxylate symporter family FA584_10565 PF00375 Sodium:dicarboxylate symporter family FA584_10575 PF01367 5'-3' exonuclease, C-terminal SAM fold FA584_10575 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FA584_10575 PF00476 DNA polymerase family A FA584_10580 PF02659 Putative manganese efflux pump FA584_10600 PF00684 DnaJ central domain FA584_10600 PF00226 DnaJ domain FA584_10600 PF01556 DnaJ C terminal domain FA584_10610 PF00072 Response regulator receiver domain FA584_10610 PF00486 Transcriptional regulatory protein, C terminal FA584_10620 PF02132 RecR protein FA584_10620 PF13662 Toprim domain FA584_10625 PF00563 EAL domain FA584_10625 PF00990 Diguanylate cyclase, GGDEF domain FA584_10625 PF03707 Bacterial signalling protein N terminal repeat FA584_10630 PF02743 Cache domain FA584_10630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA584_10630 PF00672 HAMP domain FA584_10635 PF00501 AMP-binding enzyme FA584_10635 PF13193 AMP-binding enzyme C-terminal domain FA584_10640 PF08501 Shikimate dehydrogenase substrate binding domain FA584_10645 PF04715 Anthranilate synthase component I, N terminal region FA584_10645 PF00425 chorismate binding enzyme FA584_10660 PF00464 Serine hydroxymethyltransferase FA584_10665 PF00152 tRNA synthetases class II (D, K and N) FA584_10665 PF01336 OB-fold nucleic acid binding domain FA584_10670 PF01475 Ferric uptake regulator family FA584_10680 PF00990 Diguanylate cyclase, GGDEF domain FA584_10685 PF00437 Type II/IV secretion system protein FA584_10690 PF02686 Glu-tRNAGln amidotransferase C subunit FA584_10710 PF03309 Type III pantothenate kinase FA584_10715 PF01634 ATP phosphoribosyltransferase FA584_10720 PF00072 Response regulator receiver domain FA584_10725 PF00672 HAMP domain FA584_10725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA584_10725 PF00512 His Kinase A (phospho-acceptor) domain FA584_10725 PF01627 Hpt domain FA584_10725 PF00072 Response regulator receiver domain FA584_10725 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FA584_10740 PF08459 UvrC Helix-hairpin-helix N-terminal FA584_10740 PF01541 GIY-YIG catalytic domain FA584_10740 PF02151 UvrB/uvrC motif FA584_10750 PF00890 FAD binding domain FA584_10755 PF03600 Citrate transporter FA584_10760 PF00117 Glutamine amidotransferase class-I FA584_10760 PF00958 GMP synthase C terminal domain FA584_10760 PF02540 NAD synthase FA584_10770 PF02844 Phosphoribosylglycinamide synthetase, N domain FA584_10770 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain FA584_10770 PF02843 Phosphoribosylglycinamide synthetase, C domain FA584_10785 PF00013 KH domain FA584_10785 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain FA584_10785 PF01138 3' exoribonuclease family, domain 1 FA584_10785 PF00575 S1 RNA binding domain FA584_10785 PF03725 3' exoribonuclease family, domain 2 FA584_10790 PF00137 ATP synthase subunit C FA584_10810 PF00364 Biotin-requiring enzyme FA584_10815 PF01293 Phosphoenolpyruvate carboxykinase FA584_10820 PF00206 Lyase FA584_10820 PF14698 Argininosuccinate lyase C-terminal FA584_10825 PF01230 HIT domain FA584_10830 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain FA584_10830 PF01409 tRNA synthetases class II core domain (F) FA584_10835 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain FA584_10835 PF03484 tRNA synthetase B5 domain FA584_10835 PF03147 Ferredoxin-fold anticodon binding domain FA584_10835 PF01588 Putative tRNA binding domain FA584_10840 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FA584_10845 PF02401 LytB protein FA584_10850 PF00575 S1 RNA binding domain FA584_10860 PF01842 ACT domain FA584_10860 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FA584_10860 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FA584_10870 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FA584_10875 PF00873 AcrB/AcrD/AcrF family FA584_10880 PF00873 AcrB/AcrD/AcrF family FA584_10890 PF08207 Elongation factor P (EF-P) KOW-like domain FA584_10890 PF01132 Elongation factor P (EF-P) OB domain FA584_10890 PF09285 Elongation factor P, C-terminal FA584_10895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA584_10895 PF00672 HAMP domain FA584_10895 PF02743 Cache domain FA584_10915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA584_10920 PF01624 MutS domain I FA584_10920 PF05192 MutS domain III FA584_10920 PF05190 MutS family domain IV FA584_10920 PF00488 MutS domain V FA584_10920 PF05188 MutS domain II FA584_10930 PF13509 S1 domain FA584_10930 PF17783 CvfB-like winged helix domain FA584_10940 PF03707 Bacterial signalling protein N terminal repeat FA584_10940 PF00563 EAL domain FA584_10940 PF00990 Diguanylate cyclase, GGDEF domain FA584_10960 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FA584_10965 PF02321 Outer membrane efflux protein FA584_10970 PF00873 AcrB/AcrD/AcrF family FA584_10975 PF13359 DDE superfamily endonuclease FA584_10975 PF13613 Helix-turn-helix of DDE superfamily endonuclease FA584_10980 PF13359 DDE superfamily endonuclease FA584_10980 PF13613 Helix-turn-helix of DDE superfamily endonuclease FA584_10985 PF00873 AcrB/AcrD/AcrF family FA584_10990 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FA584_10995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA584_10995 PF08447 PAS fold FA584_11000 PF00672 HAMP domain FA584_11000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA584_11000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA584_11000 PF17200 Single Cache domain 2 FA584_11000 PF00672 HAMP domain FA584_11000 PF17200 Single Cache domain 2 FA584_11010 PF07733 Bacterial DNA polymerase III alpha NTPase domain FA584_11010 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FA584_11010 PF02811 PHP domain FA584_11010 PF14579 Helix-hairpin-helix motif FA584_11015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA584_11015 PF00512 His Kinase A (phospho-acceptor) domain FA584_11025 PF04172 LrgB-like family FA584_11030 PF03788 LrgA family FA584_11035 PF02705 K+ potassium transporter FA584_11050 PF01098 Cell cycle protein FA584_11055 PF00849 RNA pseudouridylate synthase FA584_11055 PF01479 S4 domain FA584_11065 PF02390 Putative methyltransferase FA584_11070 PF00005 ABC transporter FA584_11085 PF00696 Amino acid kinase family FA584_11090 PF01192 RNA polymerase Rpb6 FA584_11095 PF02824 TGS domain FA584_11095 PF04607 Region found in RelA / SpoT proteins FA584_11095 PF13291 ACT domain FA584_11100 PF01479 S4 domain FA584_11100 PF00579 tRNA synthetases class I (W and Y) FA584_11105 PF03060 Nitronate monooxygenase FA584_11110 PF01520 N-acetylmuramoyl-L-alanine amidase FA584_11125 PF01336 OB-fold nucleic acid binding domain FA584_11125 PF00152 tRNA synthetases class II (D, K and N) FA584_11125 PF02938 GAD domain FA584_11130 PF00990 Diguanylate cyclase, GGDEF domain FA584_11140 PF01513 ATP-NAD kinase FA584_11145 PF13476 AAA domain FA584_11150 PF00990 Diguanylate cyclase, GGDEF domain FA584_11150 PF07694 5TMR of 5TMR-LYT FA584_11155 PF01026 TatD related DNase FA584_11160 PF05257 CHAP domain FA584_11160 PF01476 LysM domain FA584_11165 PF03330 Lytic transglycolase FA584_11165 PF05036 Sporulation related domain FA584_11170 PF00475 Imidazoleglycerol-phosphate dehydratase FA584_11190 PF01926 50S ribosome-binding GTPase FA584_11205 PF00905 Penicillin binding protein transpeptidase domain FA584_11205 PF03717 Penicillin-binding Protein dimerisation domain FA584_11205 PF05223 NTF2-like N-terminal transpeptidase domain FA584_11215 PF02130 Uncharacterized protein family UPF0054 FA584_11225 PF00133 tRNA synthetases class I (I, L, M and V) FA584_11225 PF09334 tRNA synthetases class I (M) FA584_11225 PF01588 Putative tRNA binding domain FA584_11235 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain FA584_11260 PF00749 tRNA synthetases class I (E and Q), catalytic domain FA584_11265 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain FA584_11265 PF00749 tRNA synthetases class I (E and Q), catalytic domain FA584_11280 PF01695 IstB-like ATP binding protein FA584_11285 PF00665 Integrase core domain FA584_11285 PF02796 Helix-turn-helix domain of resolvase FA584_11290 PF01578 Cytochrome C assembly protein FA584_11290 PF05140 ResB-like family FA584_11310 PF06821 Serine hydrolase FA584_11315 PF01810 LysE type translocator FA584_11320 PF00535 Glycosyl transferase family 2 FA584_11325 PF01636 Phosphotransferase enzyme family FA584_11335 PF09335 SNARE associated Golgi protein FA584_11345 PF09335 SNARE associated Golgi protein FA584_11350 PF13847 Methyltransferase domain FA584_11360 PF00230 Major intrinsic protein FA584_11370 PF00892 EamA-like transporter family FA584_11380 PF00037 4Fe-4S binding domain FA584_11405 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FA584_11405 PF01411 tRNA synthetases class II (A) FA584_11405 PF02272 DHHA1 domain FA584_11415 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FA584_11415 PF00384 Molybdopterin oxidoreductase FA584_11415 PF01568 Molydopterin dinucleotide binding domain FA584_11415 PF10518 TAT (twin-arginine translocation) pathway signal sequence FA584_11420 PF12838 4Fe-4S dicluster domain FA584_11420 PF12800 4Fe-4S binding domain FA584_11425 PF00037 4Fe-4S binding domain FA584_11425 PF12801 4Fe-4S binding domain FA584_11430 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) FA584_11435 PF00037 4Fe-4S binding domain FA584_11435 PF12800 4Fe-4S binding domain FA584_11435 PF13187 4Fe-4S dicluster domain FA584_11465 PF02001 Protein of unknown function DUF134 FA584_11485 PF01654 Cytochrome bd terminal oxidase subunit I FA584_11490 PF02322 Cytochrome bd terminal oxidase subunit II FA584_11495 PF01926 50S ribosome-binding GTPase FA584_11495 PF06071 Protein of unknown function (DUF933) FA584_11515 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FA584_11515 PF01568 Molydopterin dinucleotide binding domain FA584_11515 PF00384 Molybdopterin oxidoreductase FA584_11520 PF13187 4Fe-4S dicluster domain FA584_11520 PF12838 4Fe-4S dicluster domain FA584_11530 PF00072 Response regulator receiver domain FA584_11530 PF00486 Transcriptional regulatory protein, C terminal FA584_11540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA584_11540 PF08448 PAS fold FA584_11540 PF08447 PAS fold FA584_11545 PF00034 Cytochrome c FA584_11550 PF00355 Rieske [2Fe-2S] domain FA584_11550 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal FA584_11555 PF00032 Cytochrome b(C-terminal)/b6/petD FA584_11555 PF00033 Cytochrome b/b6/petB FA584_11575 PF02666 Phosphatidylserine decarboxylase FA584_11580 PF03880 DbpA RNA binding domain FA584_11580 PF00270 DEAD/DEAH box helicase FA584_11580 PF00271 Helicase conserved C-terminal domain FA584_11590 PF13309 HTH domain FA584_11590 PF08348 YheO-like PAS domain FA584_11595 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FA584_11595 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FA584_11605 PF13359 DDE superfamily endonuclease FA584_11605 PF13613 Helix-turn-helix of DDE superfamily endonuclease FA584_11610 PF13613 Helix-turn-helix of DDE superfamily endonuclease FA584_11610 PF13359 DDE superfamily endonuclease FA584_11615 PF08502 LeuA allosteric (dimerisation) domain FA584_11615 PF00682 HMGL-like FA584_11620 PF01209 ubiE/COQ5 methyltransferase family FA584_11630 PF01810 LysE type translocator FA584_11635 PF11849 Domain of unknown function (DUF3369) FA584_11640 PF17202 Single cache domain 3 FA584_11640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA584_11640 PF00672 HAMP domain FA584_11650 PF01709 Transcriptional regulator FA584_11660 PF16868 NMT1-like family FA584_11675 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 FA584_11675 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) FA584_11685 PF00118 TCP-1/cpn60 chaperonin family FA584_11690 PF00166 Chaperonin 10 Kd subunit FA584_11700 PF00589 Phage integrase family FA584_11700 PF14659 Phage integrase, N-terminal SAM-like domain FA584_11720 PF02796 Helix-turn-helix domain of resolvase FA584_11720 PF00665 Integrase core domain FA584_11730 PF03916 Polysulphide reductase, NrfD FA584_11735 PF05140 ResB-like family FA584_11735 PF01578 Cytochrome C assembly protein FA584_11780 PF03707 Bacterial signalling protein N terminal repeat FA584_11780 PF00990 Diguanylate cyclase, GGDEF domain FA584_11780 PF00563 EAL domain FA584_11785 PF04397 LytTr DNA-binding domain FA584_11785 PF00072 Response regulator receiver domain FA584_11795 PF02321 Outer membrane efflux protein FA584_11800 PF00005 ABC transporter FA584_11800 PF03412 Peptidase C39 family FA584_11800 PF00664 ABC transporter transmembrane region FA584_11805 PF13533 Biotin-lipoyl like FA584_11840 PF04174 A circularly permuted ATPgrasp FA584_11845 PF08379 Bacterial transglutaminase-like N-terminal region FA584_11845 PF01841 Transglutaminase-like superfamily FA584_11875 PF14403 Circularly permuted ATP-grasp type 2 FA584_11885 PF01814 Hemerythrin HHE cation binding domain FA584_11890 PF06738 Putative threonine/serine exporter FA584_11895 PF06738 Putative threonine/serine exporter FA584_11895 PF12821 Threonine/Serine exporter, ThrE FA584_11900 PF00403 Heavy-metal-associated domain FA584_11905 PF01022 Bacterial regulatory protein, arsR family FA584_11920 PF00464 Serine hydroxymethyltransferase FA584_11925 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FA584_11925 PF02805 Metal binding domain of Ada FA584_11925 PF12833 Helix-turn-helix domain FA584_11925 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FA584_11930 PF02743 Cache domain FA584_11930 PF00672 HAMP domain FA584_11930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA584_11935 PF02581 Thiamine monophosphate synthase FA584_11950 PF03006 Haemolysin-III related FA584_11955 PF01810 LysE type translocator FA584_11960 PF00892 EamA-like transporter family FA584_11980 PF14579 Helix-hairpin-helix motif FA584_11980 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FA584_11980 PF07733 Bacterial DNA polymerase III alpha NTPase domain FA584_11980 PF00929 Exonuclease FA584_11980 PF11490 DNA polymerase III polC-type N-terminus II FA584_11980 PF02811 PHP domain FA584_12000 PF01758 Sodium Bile acid symporter family FA584_12005 PF08267 Cobalamin-independent synthase, N-terminal domain FA584_12005 PF01717 Cobalamin-independent synthase, Catalytic domain FA584_12015 PF01435 Peptidase family M48 FA584_12035 PF01739 CheR methyltransferase, SAM binding domain FA584_12040 PF00072 Response regulator receiver domain FA584_12040 PF01339 CheB methylesterase FA584_12045 PF02789 Cytosol aminopeptidase family, N-terminal domain FA584_12045 PF00883 Cytosol aminopeptidase family, catalytic domain FA584_12055 PF00291 Pyridoxal-phosphate dependent enzyme FA584_12060 PF00156 Phosphoribosyl transferase domain FA584_12070 PF02502 Ribose/Galactose Isomerase FA584_12075 PF02163 Peptidase family M50 FA584_12080 PF10502 Signal peptidase, peptidase S26 FA584_12085 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FA584_12085 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FA584_12095 PF00202 Aminotransferase class-III FA584_12110 PF04055 Radical SAM superfamily FA584_12115 PF05193 Peptidase M16 inactive domain FA584_12120 PF00271 Helicase conserved C-terminal domain FA584_12120 PF04851 Type III restriction enzyme, res subunit FA584_12150 PF02623 FliW protein FA584_12155 PF13525 Outer membrane lipoprotein FA584_12160 PF05362 Lon protease (S16) C-terminal proteolytic domain FA584_12160 PF00004 ATPase family associated with various cellular activities (AAA) FA584_12160 PF02190 ATP-dependent protease La (LON) substrate-binding domain FA584_12165 PF01084 Ribosomal protein S18 FA584_12170 PF00436 Single-strand binding protein family FA584_12175 PF01250 Ribosomal protein S6 FA584_12180 PF06144 DNA polymerase III, delta subunit FA584_12185 PF00773 RNB domain FA584_12195 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain FA584_12195 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain FA584_12200 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FA584_12205 PF03776 Septum formation topological specificity factor MinE FA584_12210 PF04748 Divergent polysaccharide deacetylase FA584_12220 PF01925 Sulfite exporter TauE/SafE FA584_12225 PF04073 Aminoacyl-tRNA editing domain FA584_12235 PF03313 Serine dehydratase alpha chain FA584_12235 PF03315 Serine dehydratase beta chain FA584_12240 PF03652 Holliday junction resolvase FA584_12245 PF03458 UPF0126 domain FA584_12250 PF00202 Aminotransferase class-III FA584_12265 PF01648 4'-phosphopantetheinyl transferase superfamily FA584_12270 PF03748 Flagellar basal body-associated protein FliL FA584_12275 PF18073 Rubredoxin metal binding domain FA584_12280 PF00448 SRP54-type protein, GTPase domain FA584_12285 PF00578 AhpC/TSA family FA584_12295 PF12072 Domain of unknown function (DUF3552) FA584_12295 PF00013 KH domain FA584_12295 PF01966 HD domain FA584_12300 PF00005 ABC transporter FA584_12300 PF00664 ABC transporter transmembrane region FA584_12320 PF01758 Sodium Bile acid symporter family FA584_12325 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FA584_12335 PF00486 Transcriptional regulatory protein, C terminal FA584_12335 PF00072 Response regulator receiver domain FA584_12340 PF00158 Sigma-54 interaction domain FA584_12340 PF00072 Response regulator receiver domain FA584_12340 PF02954 Bacterial regulatory protein, Fis family FA584_12345 PF00563 EAL domain FA584_12345 PF08448 PAS fold FA584_12345 PF00990 Diguanylate cyclase, GGDEF domain FA584_12350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA584_12350 PF00512 His Kinase A (phospho-acceptor) domain FA584_12350 PF00497 Bacterial extracellular solute-binding proteins, family 3 FA584_12355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA584_12355 PF08448 PAS fold FA584_12355 PF08447 PAS fold FA584_12365 PF04073 Aminoacyl-tRNA editing domain FA584_12405 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FA584_12405 PF00925 GTP cyclohydrolase II FA584_12410 PF00999 Sodium/hydrogen exchanger family FA584_12410 PF02254 TrkA-N domain FA584_12420 PF00512 His Kinase A (phospho-acceptor) domain FA584_12420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA584_12420 PF00672 HAMP domain FA584_12425 PF00149 Calcineurin-like phosphoesterase FA584_12440 PF13613 Helix-turn-helix of DDE superfamily endonuclease FA584_12440 PF13359 DDE superfamily endonuclease FA584_12445 PF13359 DDE superfamily endonuclease FA584_12445 PF13613 Helix-turn-helix of DDE superfamily endonuclease FA584_12460 PF00005 ABC transporter FA584_12480 PF13419 Haloacid dehalogenase-like hydrolase FA584_12485 PF00465 Iron-containing alcohol dehydrogenase FA584_12490 PF03707 Bacterial signalling protein N terminal repeat FA584_12490 PF00990 Diguanylate cyclase, GGDEF domain FA584_12490 PF00563 EAL domain FA584_12515 PF01327 Polypeptide deformylase FA584_12520 PF03061 Thioesterase superfamily FA584_12535 PF03167 Uracil DNA glycosylase superfamily FA584_12550 PF00682 HMGL-like FA584_12555 PF04055 Radical SAM superfamily FA584_12555 PF02579 Dinitrogenase iron-molybdenum cofactor FA584_12560 PF00072 Response regulator receiver domain FA584_12565 PF00486 Transcriptional regulatory protein, C terminal FA584_12565 PF00072 Response regulator receiver domain FA584_12570 PF00990 Diguanylate cyclase, GGDEF domain FA584_12570 PF10442 FIST C domain FA584_12570 PF00563 EAL domain FA584_12570 PF08495 FIST N domain FA584_12575 PF08447 PAS fold FA584_12575 PF08448 PAS fold FA584_12575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA584_12580 PF00072 Response regulator receiver domain FA584_12580 PF02954 Bacterial regulatory protein, Fis family FA584_12580 PF00158 Sigma-54 interaction domain FA584_12585 PF00258 Flavodoxin FA584_12585 PF00753 Metallo-beta-lactamase superfamily FA584_12590 PF02579 Dinitrogenase iron-molybdenum cofactor FA584_12600 PF00148 Nitrogenase component 1 type Oxidoreductase FA584_12605 PF00148 Nitrogenase component 1 type Oxidoreductase FA584_12610 PF00890 FAD binding domain FA584_12610 PF14537 Cytochrome c3 FA584_12645 PF12794 Mechanosensitive ion channel inner membrane domain 1 FA584_12645 PF12795 Mechanosensitive ion channel porin domain FA584_12645 PF00924 Mechanosensitive ion channel FA584_12650 PF02579 Dinitrogenase iron-molybdenum cofactor FA584_12655 PF03270 Protein of unknown function, DUF269 FA584_12660 PF00258 Flavodoxin FA584_12665 PF03206 Nitrogen fixation protein NifW FA584_12670 PF04319 NifZ domain FA584_12685 PF04963 Sigma-54 factor, core binding domain FA584_12685 PF04552 Sigma-54, DNA binding domain FA584_12685 PF00309 Sigma-54 factor, Activator interacting domain (AID) FA584_12700 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FA584_12710 PF00905 Penicillin binding protein transpeptidase domain FA584_12715 PF00990 Diguanylate cyclase, GGDEF domain FA584_12715 PF00563 EAL domain FA584_12715 PF03707 Bacterial signalling protein N terminal repeat FA584_12735 PF01863 Protein of unknown function DUF45 FA584_12745 PF02567 Phenazine biosynthesis-like protein FA584_12750 PF00892 EamA-like transporter family FA584_12755 PF12833 Helix-turn-helix domain FA584_12760 PF00561 alpha/beta hydrolase fold FA584_12775 PF13536 Putative multidrug resistance efflux transporter FA584_12785 PF05230 MASE2 domain FA584_12785 PF00990 Diguanylate cyclase, GGDEF domain FA584_12790 PF01063 Amino-transferase class IV FA584_12795 PF00392 Bacterial regulatory proteins, gntR family FA584_12795 PF00155 Aminotransferase class I and II FA584_12810 PF08448 PAS fold FA584_12810 PF00990 Diguanylate cyclase, GGDEF domain FA584_12825 PF00672 HAMP domain FA584_12825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA584_12830 PF13359 DDE superfamily endonuclease FA584_12830 PF13613 Helix-turn-helix of DDE superfamily endonuclease FA584_12835 PF13613 Helix-turn-helix of DDE superfamily endonuclease FA584_12835 PF13359 DDE superfamily endonuclease FA584_12850 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family FA584_12860 PF00148 Nitrogenase component 1 type Oxidoreductase FA584_12865 PF11844 Domain of unknown function (DUF3364) FA584_12865 PF00148 Nitrogenase component 1 type Oxidoreductase FA584_12870 PF00072 Response regulator receiver domain FA584_12875 PF02796 Helix-turn-helix domain of resolvase FA584_12875 PF00665 Integrase core domain FA584_12895 PF05199 GMC oxidoreductase FA584_12895 PF00732 GMC oxidoreductase FA584_12915 PF00486 Transcriptional regulatory protein, C terminal FA584_12915 PF00072 Response regulator receiver domain FA584_12920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA584_12925 PF00583 Acetyltransferase (GNAT) family FA584_12925 PF00795 Carbon-nitrogen hydrolase FA584_12945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA584_12945 PF17202 Single cache domain 3 FA584_12945 PF00672 HAMP domain FA584_12955 PF07992 Pyridine nucleotide-disulphide oxidoreductase FA584_12955 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FA584_12960 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA FA584_12965 PF13247 4Fe-4S dicluster domain FA584_12970 PF00374 Nickel-dependent hydrogenase FA584_12970 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FA584_12975 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FA584_12985 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FA584_13000 PF05977 Transmembrane secretion effector FA584_13005 PF00857 Isochorismatase family FA584_13020 PF00155 Aminotransferase class I and II FA584_13025 PF07683 Cobalamin synthesis protein cobW C-terminal domain FA584_13025 PF02492 CobW/HypB/UreG, nucleotide-binding domain FA584_13030 PF04328 Selenoprotein, putative FA584_13035 PF02554 Carbon starvation protein CstA FA584_13035 PF13722 5TM C-terminal transporter carbon starvation CstA FA584_13045 PF00890 FAD binding domain FA584_13045 PF02910 Fumarate reductase flavoprotein C-term FA584_13050 PF06988 NifT/FixU protein FA584_13055 PF13185 GAF domain FA584_13055 PF02954 Bacterial regulatory protein, Fis family FA584_13055 PF00158 Sigma-54 interaction domain FA584_13080 PF02769 AIR synthase related protein, C-terminal domain FA584_13080 PF00586 AIR synthase related protein, N-terminal domain FA584_13085 PF01142 tRNA pseudouridine synthase D (TruD) FA584_13095 PF02080 TrkA-C domain FA584_13095 PF00999 Sodium/hydrogen exchanger family FA584_13095 PF02254 TrkA-N domain FA584_13100 PF03707 Bacterial signalling protein N terminal repeat FA584_13100 PF00563 EAL domain FA584_13100 PF00990 Diguanylate cyclase, GGDEF domain FA584_13110 PF00990 Diguanylate cyclase, GGDEF domain FA584_13115 PF08543 Phosphomethylpyrimidine kinase FA584_13135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA584_13135 PF00672 HAMP domain FA584_13135 PF02743 Cache domain FA584_13150 PF16326 ABC transporter C-terminal domain FA584_13150 PF12848 ABC transporter FA584_13150 PF00005 ABC transporter FA584_13155 PF00691 OmpA family FA584_13155 PF13677 Membrane MotB of proton-channel complex MotA/MotB FA584_13160 PF01618 MotA/TolQ/ExbB proton channel family FA584_13165 PF08361 MAATS-type transcriptional repressor, C-terminal region FA584_13165 PF00440 Bacterial regulatory proteins, tetR family FA584_13170 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FA584_13175 PF00873 AcrB/AcrD/AcrF family FA584_13180 PF02321 Outer membrane efflux protein FA584_13195 PF00881 Nitroreductase family FA584_13210 PF17092 Penicillin-binding protein OB-like domain FA584_13210 PF00912 Transglycosylase FA584_13210 PF00905 Penicillin binding protein transpeptidase domain FA584_13225 PF14535 AMP-binding enzyme C-terminal domain FA584_13225 PF00501 AMP-binding enzyme FA584_13235 PF00501 AMP-binding enzyme FA584_13235 PF14535 AMP-binding enzyme C-terminal domain FA584_13260 PF02561 Flagellar protein FliS FA584_13290 PF02119 Flagellar P-ring protein FA584_13310 PF00460 Flagella basal body rod protein FA584_13310 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FA584_13315 PF00528 Binding-protein-dependent transport system inner membrane component FA584_13315 PF12911 N-terminal TM domain of oligopeptide transport permease C FA584_13325 PF00916 Sulfate permease family FA584_13325 PF01740 STAS domain FA584_13330 PF01361 Tautomerase enzyme FA584_13335 PF00119 ATP synthase A chain FA584_13345 PF02581 Thiamine monophosphate synthase FA584_13345 PF17792 ThiD2 family FA584_13350 PF02637 GatB domain FA584_13350 PF02934 GatB/GatE catalytic domain FA584_13355 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus FA584_13355 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FA584_13360 PF01915 Glycosyl hydrolase family 3 C-terminal domain FA584_13360 PF00933 Glycosyl hydrolase family 3 N terminal domain FA584_13365 PF01979 Amidohydrolase family FA584_13370 PF01416 tRNA pseudouridine synthase FA584_13380 PF01478 Type IV leader peptidase family FA584_13380 PF06750 Bacterial Peptidase A24 N-terminal domain FA584_13390 PF02441 Flavoprotein FA584_13390 PF04127 DNA / pantothenate metabolism flavoprotein FA584_13395 PF12804 MobA-like NTP transferase domain FA584_13395 PF00132 Bacterial transferase hexapeptide (six repeats) FA584_13400 PF00813 FliP family FA584_13405 PF01263 Aldose 1-epimerase FA584_13410 PF02525 Flavodoxin-like fold FA584_13425 PF13194 Domain of unknown function (DUF4010) FA584_13430 PF08497 Radical SAM N-terminal FA584_13430 PF04055 Radical SAM superfamily FA584_13435 PF00342 Phosphoglucose isomerase FA584_13450 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal FA584_13450 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FA584_13455 PF00374 Nickel-dependent hydrogenase FA584_13460 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FA584_13460 PF10518 TAT (twin-arginine translocation) pathway signal sequence FA584_13460 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal FA584_13465 PF00374 Nickel-dependent hydrogenase FA584_13470 PF01292 Prokaryotic cytochrome b561 FA584_13475 PF01750 Hydrogenase maturation protease FA584_13485 PF01300 Telomere recombination FA584_13485 PF07503 HypF finger FA584_13485 PF00708 Acylphosphatase FA584_13485 PF17788 HypF Kae1-like domain FA584_13490 PF01402 Ribbon-helix-helix protein, copG family FA584_13490 PF08753 NikR C terminal nickel binding domain FA584_13500 PF02492 CobW/HypB/UreG, nucleotide-binding domain FA584_13505 PF01455 HupF/HypC family FA584_13510 PF01924 Hydrogenase formation hypA family FA584_13515 PF00586 AIR synthase related protein, N-terminal domain FA584_13515 PF02769 AIR synthase related protein, C-terminal domain FA584_13520 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA FA584_13525 PF00583 Acetyltransferase (GNAT) family FA584_13530 PF13419 Haloacid dehalogenase-like hydrolase FA584_13545 PF03971 Monomeric isocitrate dehydrogenase FA584_13550 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FA584_13550 PF00056 lactate/malate dehydrogenase, NAD binding domain FA584_13555 PF00549 CoA-ligase FA584_13555 PF08442 ATP-grasp domain FA584_13560 PF00549 CoA-ligase FA584_13560 PF02629 CoA binding domain FA584_13570 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II FA584_13570 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg FA584_13570 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase FA584_13620 PF13359 DDE superfamily endonuclease FA584_13620 PF13613 Helix-turn-helix of DDE superfamily endonuclease FA584_13625 PF13359 DDE superfamily endonuclease FA584_13625 PF13613 Helix-turn-helix of DDE superfamily endonuclease FA584_13690 PF00005 ABC transporter FA584_13705 PF01914 MarC family integral membrane protein FA584_13720 PF00072 Response regulator receiver domain FA584_13720 PF00990 Diguanylate cyclase, GGDEF domain FA584_13725 PF01168 Alanine racemase, N-terminal domain FA584_13730 PF17820 PDZ domain FA584_13730 PF02163 Peptidase family M50 FA584_13735 PF01066 CDP-alcohol phosphatidyltransferase FA584_13745 PF00701 Dihydrodipicolinate synthetase family FA584_13755 PF01180 Dihydroorotate dehydrogenase FA584_13760 PF00005 ABC transporter FA584_13760 PF00664 ABC transporter transmembrane region FA584_13765 PF01406 tRNA synthetases class I (C) catalytic domain FA584_13770 PF03023 Lipid II flippase MurJ FA584_13780 PF01330 RuvA N terminal domain FA584_13780 PF07499 RuvA, C-terminal domain FA584_13785 PF01820 D-ala D-ala ligase N-terminus FA584_13785 PF07478 D-ala D-ala ligase C-terminus FA584_13800 PF00708 Acylphosphatase FA584_13805 PF08245 Mur ligase middle domain FA584_13805 PF02875 Mur ligase family, glutamate ligase domain FA584_13805 PF01225 Mur ligase family, catalytic domain FA584_13810 PF01515 Phosphate acetyl/butaryl transferase FA584_13810 PF07085 DRTGG domain FA584_13815 PF00871 Acetokinase family FA584_13820 PF09424 Yqey-like protein FA584_13825 PF02107 Flagellar L-ring protein FA584_13835 PF00482 Type II secretion system (T2SS), protein F FA584_13840 PF00437 Type II/IV secretion system protein FA584_13855 PF00263 Bacterial type II and III secretion system protein FA584_13855 PF03958 Bacterial type II/III secretion system short domain FA584_13875 PF01926 50S ribosome-binding GTPase FA584_13875 PF07650 KH domain FA584_13880 PF07724 AAA domain (Cdc48 subfamily) FA584_13880 PF10431 C-terminal, D2-small domain, of ClpB protein FA584_13885 PF00227 Proteasome subunit FA584_13890 PF03948 Ribosomal protein L9, C-terminal domain FA584_13890 PF01281 Ribosomal protein L9, N-terminal domain FA584_13900 PF00764 Arginosuccinate synthase FA584_13905 PF01479 S4 domain FA584_13910 PF00591 Glycosyl transferase family, a/b domain FA584_13910 PF02885 Glycosyl transferase family, helical bundle domain FA584_13915 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE FA584_13920 PF12399 Branched-chain amino acid ATP-binding cassette transporter FA584_13920 PF00005 ABC transporter FA584_13925 PF00309 Sigma-54 factor, Activator interacting domain (AID) FA584_13925 PF04963 Sigma-54 factor, core binding domain FA584_13925 PF04552 Sigma-54, DNA binding domain FA584_13935 PF04376 Arginine-tRNA-protein transferase, N terminus FA584_13935 PF04377 Arginine-tRNA-protein transferase, C terminus FA584_13940 PF14659 Phage integrase, N-terminal SAM-like domain FA584_13940 PF00589 Phage integrase family FA584_13945 PF13359 DDE superfamily endonuclease FA584_13945 PF13613 Helix-turn-helix of DDE superfamily endonuclease FA584_13950 PF13613 Helix-turn-helix of DDE superfamily endonuclease FA584_13950 PF13359 DDE superfamily endonuclease FA584_13965 PF02743 Cache domain FA584_13965 PF00672 HAMP domain FA584_13965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA584_13970 PF00072 Response regulator receiver domain FA584_13980 PF08448 PAS fold FA584_13980 PF08447 PAS fold FA584_13980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA584_13985 PF02954 Bacterial regulatory protein, Fis family FA584_13985 PF00072 Response regulator receiver domain FA584_13985 PF00158 Sigma-54 interaction domain