locus-tag class description FA592_00030 PF08448 PAS fold FA592_00030 PF08447 PAS fold FA592_00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA592_00050 PF02796 Helix-turn-helix domain of resolvase FA592_00050 PF00665 Integrase core domain FA592_00060 PF00885 6,7-dimethyl-8-ribityllumazine synthase FA592_00085 PF08448 PAS fold FA592_00085 PF08447 PAS fold FA592_00085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA592_00105 PF00072 Response regulator receiver domain FA592_00105 PF01966 HD domain FA592_00115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA592_00115 PF08447 PAS fold FA592_00115 PF08448 PAS fold FA592_00120 PF00486 Transcriptional regulatory protein, C terminal FA592_00120 PF00072 Response regulator receiver domain FA592_00130 PF12838 4Fe-4S dicluster domain FA592_00130 PF12800 4Fe-4S binding domain FA592_00140 PF03186 CobD/Cbib protein FA592_00145 PF00155 Aminotransferase class I and II FA592_00150 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase FA592_00155 PF07685 CobB/CobQ-like glutamine amidotransferase domain FA592_00160 PF02277 Phosphoribosyltransferase FA592_00170 PF02654 Cobalamin-5-phosphate synthase FA592_00175 PF00300 Histidine phosphatase superfamily (branch 1) FA592_00180 PF06180 Cobalt chelatase (CbiK) FA592_00190 PF00005 ABC transporter FA592_00200 PF02570 Precorrin-8X methylmutase FA592_00205 PF01888 CbiD FA592_00215 PF05175 Methyltransferase small domain FA592_00220 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FA592_00225 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FA592_00230 PF11760 Cobalamin synthesis G N-terminal FA592_00230 PF11761 Cobalamin biosynthesis central region FA592_00230 PF01890 Cobalamin synthesis G C-terminus FA592_00235 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FA592_00235 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FA592_00240 PF02602 Uroporphyrinogen-III synthase HemD FA592_00240 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FA592_00245 PF02571 Precorrin-6x reductase CbiJ/CobK FA592_00250 PF00664 ABC transporter transmembrane region FA592_00250 PF00005 ABC transporter FA592_00255 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FA592_00255 PF07685 CobB/CobQ-like glutamine amidotransferase domain FA592_00265 PF10414 Sirohaem synthase dimerisation region FA592_00265 PF14824 Sirohaem biosynthesis protein central FA592_00265 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FA592_00270 PF18665 Tetracyclin repressor-like, C-terminal domain FA592_00270 PF00440 Bacterial regulatory proteins, tetR family FA592_00335 PF00665 Integrase core domain FA592_00335 PF02796 Helix-turn-helix domain of resolvase FA592_00355 PF00589 Phage integrase family FA592_00355 PF14659 Phage integrase, N-terminal SAM-like domain FA592_00365 PF00216 Bacterial DNA-binding protein FA592_00375 PF17854 FtsK alpha domain FA592_00375 PF09397 Ftsk gamma domain FA592_00375 PF01580 FtsK/SpoIIIE family FA592_00380 PF11791 Aconitate B N-terminal domain FA592_00380 PF06434 Aconitate hydratase 2 N-terminus FA592_00380 PF00330 Aconitase family (aconitate hydratase) FA592_00385 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FA592_00390 PF02896 PEP-utilising enzyme, TIM barrel domain FA592_00390 PF00391 PEP-utilising enzyme, mobile domain FA592_00390 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain FA592_00395 PF06629 MltA-interacting protein MipA FA592_00405 PF07690 Major Facilitator Superfamily FA592_00425 PF05958 tRNA (Uracil-5-)-methyltransferase FA592_00430 PF02743 Cache domain FA592_00430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA592_00430 PF00672 HAMP domain FA592_00435 PF13380 CoA binding domain FA592_00440 PF00291 Pyridoxal-phosphate dependent enzyme FA592_00440 PF13291 ACT domain FA592_00450 PF00005 ABC transporter FA592_00455 PF00528 Binding-protein-dependent transport system inner membrane component FA592_00460 PF00528 Binding-protein-dependent transport system inner membrane component FA592_00465 PF00497 Bacterial extracellular solute-binding proteins, family 3 FA592_00470 PF01474 Class-II DAHP synthetase family FA592_00485 PF09335 SNARE associated Golgi protein FA592_00490 PF00005 ABC transporter FA592_00490 PF02687 FtsX-like permease family FA592_00490 PF12704 MacB-like periplasmic core domain FA592_00495 PF00171 Aldehyde dehydrogenase family FA592_00500 PF07992 Pyridine nucleotide-disulphide oxidoreductase FA592_00510 PF05175 Methyltransferase small domain FA592_00510 PF08468 Methyltransferase small domain N-terminal FA592_00515 PF03692 Putative zinc- or iron-chelating domain FA592_00525 PF00218 Indole-3-glycerol phosphate synthase FA592_00540 PF00005 ABC transporter FA592_00555 PF13190 PDGLE domain FA592_00555 PF01891 Cobalt uptake substrate-specific transmembrane region FA592_00560 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FA592_00565 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ FA592_00580 PF07992 Pyridine nucleotide-disulphide oxidoreductase FA592_00595 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FA592_00595 PF00205 Thiamine pyrophosphate enzyme, central domain FA592_00595 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FA592_00600 PF10369 Small subunit of acetolactate synthase FA592_00605 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD FA592_00605 PF00132 Bacterial transferase hexapeptide (six repeats) FA592_00615 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FA592_00615 PF07992 Pyridine nucleotide-disulphide oxidoreductase FA592_00620 PF00155 Aminotransferase class I and II FA592_00625 PF00148 Nitrogenase component 1 type Oxidoreductase FA592_00630 PF01590 GAF domain FA592_00630 PF02954 Bacterial regulatory protein, Fis family FA592_00630 PF00158 Sigma-54 interaction domain FA592_00640 PF00148 Nitrogenase component 1 type Oxidoreductase FA592_00645 PF03139 Vanadium/alternative nitrogenase delta subunit FA592_00650 PF00148 Nitrogenase component 1 type Oxidoreductase FA592_00655 PF00132 Bacterial transferase hexapeptide (six repeats) FA592_00660 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FA592_00660 PF17810 Arginine decarboxylase helical bundle domain FA592_00660 PF17944 Arginine decarboxylase C-terminal helical extension FA592_00665 PF03129 Anticodon binding domain FA592_00665 PF13393 Histidyl-tRNA synthetase FA592_00670 PF02223 Thymidylate kinase FA592_00675 PF01467 Cytidylyltransferase-like FA592_00680 PF02441 Flavoprotein FA592_00695 PF00672 HAMP domain FA592_00695 PF16591 Helical bimodular sensor domain FA592_00695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA592_00700 PF00994 Probable molybdopterin binding domain FA592_00700 PF03454 MoeA C-terminal region (domain IV) FA592_00700 PF03453 MoeA N-terminal region (domain I and II) FA592_00705 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FA592_00720 PF00731 AIR carboxylase FA592_00725 PF02540 NAD synthase FA592_00730 PF01969 Protein of unknown function DUF111 FA592_00735 PF09861 Lactate racemase N-terminal domain FA592_00740 PF05681 Fumarate hydratase (Fumerase) FA592_00740 PF05683 Fumarase C-terminus FA592_00745 PF05683 Fumarase C-terminus FA592_00745 PF05681 Fumarate hydratase (Fumerase) FA592_00750 PF00939 Sodium:sulfate symporter transmembrane region FA592_00755 PF00072 Response regulator receiver domain FA592_00755 PF00512 His Kinase A (phospho-acceptor) domain FA592_00755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA592_00755 PF09308 LuxQ, periplasmic FA592_00760 PF00486 Transcriptional regulatory protein, C terminal FA592_00760 PF00072 Response regulator receiver domain FA592_00775 PF00300 Histidine phosphatase superfamily (branch 1) FA592_00785 PF18644 Phage integrase SAM-like domain FA592_00785 PF00589 Phage integrase family FA592_00790 PF01702 Queuine tRNA-ribosyltransferase FA592_00800 PF01761 3-dehydroquinate synthase FA592_00810 PF04055 Radical SAM superfamily FA592_00810 PF00919 Uncharacterized protein family UPF0004 FA592_00815 PF00004 ATPase family associated with various cellular activities (AAA) FA592_00815 PF06480 FtsH Extracellular FA592_00815 PF17862 AAA+ lid domain FA592_00815 PF01434 Peptidase family M41 FA592_00835 PF00296 Luciferase-like monooxygenase FA592_00840 PF01479 S4 domain FA592_00840 PF00849 RNA pseudouridylate synthase FA592_00850 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FA592_00850 PF00205 Thiamine pyrophosphate enzyme, central domain FA592_00850 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FA592_00870 PF12833 Helix-turn-helix domain FA592_00870 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term FA592_00880 PF08359 YsiA-like protein, C-terminal region FA592_00880 PF00440 Bacterial regulatory proteins, tetR family FA592_00890 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FA592_00890 PF00529 HlyD membrane-fusion protein of T1SS FA592_00895 PF00873 AcrB/AcrD/AcrF family FA592_00915 PF17202 Single cache domain 3 FA592_00915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA592_00915 PF00672 HAMP domain FA592_00920 PF02915 Rubrerythrin FA592_00930 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase FA592_00935 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain FA592_00935 PF03900 Porphobilinogen deaminase, C-terminal domain FA592_00940 PF06965 Na+/H+ antiporter 1 FA592_00940 PF13462 Thioredoxin FA592_00945 PF04186 FxsA cytoplasmic membrane protein FA592_00950 PF04073 Aminoacyl-tRNA editing domain FA592_00950 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FA592_00950 PF03129 Anticodon binding domain FA592_00955 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain FA592_00955 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain FA592_00955 PF01488 Shikimate / quinate 5-dehydrogenase FA592_00960 PF00348 Polyprenyl synthetase FA592_00975 PF01053 Cys/Met metabolism PLP-dependent enzyme FA592_00980 PF02082 Transcriptional regulator FA592_00985 PF00291 Pyridoxal-phosphate dependent enzyme FA592_00990 PF00990 Diguanylate cyclase, GGDEF domain FA592_00995 PF08264 Anticodon-binding domain of tRNA FA592_00995 PF00133 tRNA synthetases class I (I, L, M and V) FA592_00995 PF10458 Valyl tRNA synthetase tRNA binding arm FA592_01000 PF00994 Probable molybdopterin binding domain FA592_01005 PF08546 Ketopantoate reductase PanE/ApbA C terminal FA592_01005 PF02558 Ketopantoate reductase PanE/ApbA FA592_01010 PF00815 Histidinol dehydrogenase FA592_01020 PF01116 Fructose-bisphosphate aldolase class-II FA592_01030 PF10576 Iron-sulfur binding domain of endonuclease III FA592_01030 PF00633 Helix-hairpin-helix motif FA592_01030 PF00730 HhH-GPD superfamily base excision DNA repair protein FA592_01040 PF01546 Peptidase family M20/M25/M40 FA592_01040 PF07687 Peptidase dimerisation domain FA592_01050 PF08003 Protein of unknown function (DUF1698) FA592_01065 PF02540 NAD synthase FA592_01070 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FA592_01075 PF02606 Tetraacyldisaccharide-1-P 4'-kinase FA592_01080 PF00696 Amino acid kinase family FA592_01085 PF00291 Pyridoxal-phosphate dependent enzyme FA592_01090 PF02348 Cytidylyltransferase FA592_01100 PF03976 Polyphosphate kinase 2 (PPK2) FA592_01105 PF01966 HD domain FA592_01110 PF00012 Hsp70 protein FA592_01115 PF01025 GrpE FA592_01130 PF00312 Ribosomal protein S15 FA592_01135 PF02082 Transcriptional regulator FA592_01140 PF00771 FHIPEP family FA592_01155 PF13649 Methyltransferase domain FA592_01160 PF13185 GAF domain FA592_01160 PF00990 Diguanylate cyclase, GGDEF domain FA592_01165 PF06574 FAD synthetase FA592_01165 PF01687 Riboflavin kinase FA592_01175 PF00533 BRCA1 C Terminus (BRCT) domain FA592_01175 PF01653 NAD-dependent DNA ligase adenylation domain FA592_01175 PF03120 NAD-dependent DNA ligase OB-fold domain FA592_01175 PF12826 Helix-hairpin-helix motif FA592_01180 PF01925 Sulfite exporter TauE/SafE FA592_01190 PF00809 Pterin binding enzyme FA592_01195 PF12169 DNA polymerase III subunits gamma and tau domain III FA592_01205 PF00696 Amino acid kinase family FA592_01205 PF01842 ACT domain FA592_01205 PF13840 ACT domain FA592_01210 PF00293 NUDIX domain FA592_01215 PF06969 HemN C-terminal domain FA592_01215 PF04055 Radical SAM superfamily FA592_01220 PF00999 Sodium/hydrogen exchanger family FA592_01220 PF02254 TrkA-N domain FA592_01225 PF13411 MerR HTH family regulatory protein FA592_01230 PF00684 DnaJ central domain FA592_01230 PF01556 DnaJ C terminal domain FA592_01230 PF00226 DnaJ domain FA592_01240 PF00486 Transcriptional regulatory protein, C terminal FA592_01240 PF00072 Response regulator receiver domain FA592_01260 PF07516 SecA Wing and Scaffold domain FA592_01260 PF02810 SEC-C motif FA592_01260 PF07517 SecA DEAD-like domain FA592_01260 PF00271 Helicase conserved C-terminal domain FA592_01260 PF01043 SecA preprotein cross-linking domain FA592_01265 PF03548 Outer membrane lipoprotein carrier protein LolA FA592_01270 PF03707 Bacterial signalling protein N terminal repeat FA592_01270 PF00990 Diguanylate cyclase, GGDEF domain FA592_01270 PF00563 EAL domain FA592_01275 PF06965 Na+/H+ antiporter 1 FA592_01280 PF01926 50S ribosome-binding GTPase FA592_01280 PF12631 MnmE helical domain FA592_01280 PF10396 GTP-binding protein TrmE N-terminus FA592_01290 PF02096 60Kd inner membrane protein FA592_01290 PF14849 YidC periplasmic domain FA592_01295 PF01809 Putative membrane protein insertion efficiency factor FA592_01300 PF00825 Ribonuclease P FA592_01305 PF00468 Ribosomal protein L34 FA592_01310 PF13193 AMP-binding enzyme C-terminal domain FA592_01310 PF00668 Condensation domain FA592_01310 PF00550 Phosphopantetheine attachment site FA592_01310 PF00501 AMP-binding enzyme FA592_01315 PF13941 MutL protein FA592_01335 PF03737 Aldolase/RraA FA592_01350 PF10431 C-terminal, D2-small domain, of ClpB protein FA592_01350 PF02861 Clp amino terminal domain, pathogenicity island component FA592_01350 PF17871 AAA lid domain FA592_01350 PF00004 ATPase family associated with various cellular activities (AAA) FA592_01350 PF07724 AAA domain (Cdc48 subfamily) FA592_01355 PF13180 PDZ domain FA592_01355 PF03572 Peptidase family S41 FA592_01360 PF01259 SAICAR synthetase FA592_01365 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase FA592_01380 PF01553 Acyltransferase FA592_01385 PF00183 Hsp90 protein FA592_01405 PF03190 Protein of unknown function, DUF255 FA592_01415 PF00580 UvrD/REP helicase N-terminal domain FA592_01415 PF13361 UvrD-like helicase C-terminal domain FA592_01445 PF02689 Helicase FA592_01445 PF05970 PIF1-like helicase FA592_01465 PF08534 Redoxin FA592_01475 PF00403 Heavy-metal-associated domain FA592_01480 PF00403 Heavy-metal-associated domain FA592_01485 PF01966 HD domain FA592_01490 PF02646 RmuC family FA592_01500 PF01795 MraW methylase family FA592_01505 PF00202 Aminotransferase class-III FA592_01510 PF13145 PPIC-type PPIASE domain FA592_01515 PF02491 SHS2 domain inserted in FTSA FA592_01520 PF00091 Tubulin/FtsZ family, GTPase domain FA592_01520 PF12327 FtsZ family, C-terminal domain FA592_01530 PF02390 Putative methyltransferase FA592_01530 PF05175 Methyltransferase small domain FA592_01530 PF17827 PrmC N-terminal domain FA592_01535 PF01435 Peptidase family M48 FA592_01540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA592_01540 PF00672 HAMP domain FA592_01540 PF12729 Four helix bundle sensory module for signal transduction FA592_01550 PF00672 HAMP domain FA592_01550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA592_01560 PF01883 Iron-sulfur cluster assembly protein FA592_01575 PF01808 AICARFT/IMPCHase bienzyme FA592_01575 PF02142 MGS-like domain FA592_01580 PF02600 Disulfide bond formation protein DsbB FA592_01590 PF03061 Thioesterase superfamily FA592_01595 PF05099 Tellurite resistance protein TerB FA592_01595 PF00226 DnaJ domain FA592_01600 PF00155 Aminotransferase class I and II FA592_01620 PF03641 Possible lysine decarboxylase FA592_01635 PF00005 ABC transporter FA592_01640 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FA592_01645 PF00440 Bacterial regulatory proteins, tetR family FA592_01645 PF09209 Tetracyclin repressor-like, C-terminal domain FA592_01655 PF00872 Transposase, Mutator family FA592_01660 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain FA592_01660 PF02769 AIR synthase related protein, C-terminal domain FA592_01660 PF00586 AIR synthase related protein, N-terminal domain FA592_01665 PF03707 Bacterial signalling protein N terminal repeat FA592_01665 PF00990 Diguanylate cyclase, GGDEF domain FA592_01665 PF00563 EAL domain FA592_01670 PF02416 mttA/Hcf106 family FA592_01675 PF00902 Sec-independent protein translocase protein (TatC) FA592_01680 PF02547 Queuosine biosynthesis protein FA592_01705 PF00072 Response regulator receiver domain FA592_01710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA592_01710 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FA592_01710 PF00072 Response regulator receiver domain FA592_01710 PF00672 HAMP domain FA592_01710 PF00512 His Kinase A (phospho-acceptor) domain FA592_01710 PF01627 Hpt domain FA592_01715 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain FA592_01715 PF10996 Beta-Casp domain FA592_01715 PF00753 Metallo-beta-lactamase superfamily FA592_01720 PF00501 AMP-binding enzyme FA592_01730 PF07715 TonB-dependent Receptor Plug Domain FA592_01730 PF00593 TonB dependent receptor FA592_01735 PF07715 TonB-dependent Receptor Plug Domain FA592_01735 PF00593 TonB dependent receptor FA592_01740 PF02386 Cation transport protein FA592_01745 PF02080 TrkA-C domain FA592_01745 PF02254 TrkA-N domain FA592_01750 PF01641 SelR domain FA592_01755 PF01595 Cyclin M transmembrane N-terminal domain FA592_01755 PF00571 CBS domain FA592_01755 PF03471 Transporter associated domain FA592_01760 PF13456 Reverse transcriptase-like FA592_01760 PF00300 Histidine phosphatase superfamily (branch 1) FA592_01765 PF12804 MobA-like NTP transferase domain FA592_01770 PF02625 XdhC and CoxI family FA592_01770 PF13478 XdhC Rossmann domain FA592_01775 PF00501 AMP-binding enzyme FA592_01775 PF14535 AMP-binding enzyme C-terminal domain FA592_01790 PF08241 Methyltransferase domain FA592_01800 PF07992 Pyridine nucleotide-disulphide oxidoreductase FA592_01800 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FA592_01800 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FA592_01805 PF01799 [2Fe-2S] binding domain FA592_01805 PF00111 2Fe-2S iron-sulfur cluster binding domain FA592_01805 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FA592_01805 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FA592_01810 PF00497 Bacterial extracellular solute-binding proteins, family 3 FA592_01810 PF00512 His Kinase A (phospho-acceptor) domain FA592_01810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA592_01810 PF00072 Response regulator receiver domain FA592_01815 PF00072 Response regulator receiver domain FA592_01815 PF00486 Transcriptional regulatory protein, C terminal FA592_01815 PF01627 Hpt domain FA592_01820 PF14437 MafB19-like deaminase FA592_01830 PF02146 Sir2 family FA592_01840 PF02607 B12 binding domain FA592_01840 PF02965 Vitamin B12 dependent methionine synthase, activation domain FA592_01840 PF02574 Homocysteine S-methyltransferase FA592_01840 PF02310 B12 binding domain FA592_01840 PF00809 Pterin binding enzyme FA592_01845 PF13458 Periplasmic binding protein FA592_01850 PF13458 Periplasmic binding protein FA592_01855 PF02743 Cache domain FA592_01855 PF00672 HAMP domain FA592_01855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA592_01860 PF01810 LysE type translocator FA592_01865 PF00892 EamA-like transporter family FA592_01870 PF02743 Cache domain FA592_01870 PF00672 HAMP domain FA592_01870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA592_01875 PF00884 Sulfatase FA592_01880 PF00909 Ammonium Transporter Family FA592_01885 PF00543 Nitrogen regulatory protein P-II FA592_01900 PF00072 Response regulator receiver domain FA592_01900 PF01966 HD domain FA592_01905 PF02092 Glycyl-tRNA synthetase beta subunit FA592_01920 PF00484 Carbonic anhydrase FA592_01925 PF06865 Pyrimidine/purine nucleoside phosphorylase FA592_01930 PF03707 Bacterial signalling protein N terminal repeat FA592_01930 PF00563 EAL domain FA592_01930 PF00990 Diguanylate cyclase, GGDEF domain FA592_01945 PF00588 SpoU rRNA Methylase family FA592_01950 PF00551 Formyl transferase FA592_01950 PF01842 ACT domain FA592_01970 PF00180 Isocitrate/isopropylmalate dehydrogenase FA592_01975 PF00694 Aconitase C-terminal domain FA592_01990 PF00005 ABC transporter FA592_01995 PF00873 AcrB/AcrD/AcrF family FA592_02010 PF02040 Arsenical pump membrane protein FA592_02025 PF03372 Endonuclease/Exonuclease/phosphatase family FA592_02040 PF16591 Helical bimodular sensor domain FA592_02040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA592_02040 PF00672 HAMP domain FA592_02045 PF00293 NUDIX domain FA592_02045 PF09297 NADH pyrophosphatase zinc ribbon domain FA592_02045 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain FA592_02050 PF00174 Oxidoreductase molybdopterin binding domain FA592_02055 PF01794 Ferric reductase like transmembrane component FA592_02060 PF13474 SnoaL-like domain FA592_02075 PF00672 HAMP domain FA592_02075 PF12729 Four helix bundle sensory module for signal transduction FA592_02075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA592_02080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA592_02080 PF12729 Four helix bundle sensory module for signal transduction FA592_02080 PF00672 HAMP domain FA592_02095 PF03358 NADPH-dependent FMN reductase FA592_02100 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) FA592_02105 PF08448 PAS fold FA592_02105 PF00990 Diguanylate cyclase, GGDEF domain FA592_02115 PF09962 Uncharacterized conserved protein (DUF2196) FA592_02120 PF00271 Helicase conserved C-terminal domain FA592_02120 PF00570 HRDC domain FA592_02120 PF00270 DEAD/DEAH box helicase FA592_02120 PF16124 RecQ zinc-binding FA592_02120 PF09382 RQC domain FA592_02135 PF00270 DEAD/DEAH box helicase FA592_02135 PF00271 Helicase conserved C-terminal domain FA592_02150 PF00072 Response regulator receiver domain FA592_02150 PF00486 Transcriptional regulatory protein, C terminal FA592_02180 PF16177 Acetyl-coenzyme A synthetase N-terminus FA592_02180 PF13193 AMP-binding enzyme C-terminal domain FA592_02180 PF00501 AMP-binding enzyme FA592_02190 PF00285 Citrate synthase, C-terminal domain FA592_02195 PF03972 MmgE/PrpD family FA592_02205 PF08274 PhnA Zinc-Ribbon FA592_02205 PF03831 PhnA domain FA592_02215 PF03591 AzlC protein FA592_02220 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FA592_02220 PF00460 Flagella basal body rod protein FA592_02225 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FA592_02225 PF00460 Flagella basal body rod protein FA592_02230 PF04539 Sigma-70 region 3 FA592_02230 PF04545 Sigma-70, region 4 FA592_02230 PF04542 Sigma-70 region 2 FA592_02230 PF00140 Sigma-70 factor, region 1.2 FA592_02240 PF01638 HxlR-like helix-turn-helix FA592_02255 PF03824 High-affinity nickel-transport protein FA592_02260 PF00005 ABC transporter FA592_02265 PF00950 ABC 3 transport family FA592_02270 PF01297 Zinc-uptake complex component A periplasmic FA592_02270 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment FA592_02285 PF16177 Acetyl-coenzyme A synthetase N-terminus FA592_02285 PF00501 AMP-binding enzyme FA592_02285 PF13193 AMP-binding enzyme C-terminal domain FA592_02290 PF00474 Sodium:solute symporter family FA592_02295 PF04341 Protein of unknown function, DUF485 FA592_02300 PF00486 Transcriptional regulatory protein, C terminal FA592_02300 PF00072 Response regulator receiver domain FA592_02305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA592_02310 PF04371 Porphyromonas-type peptidyl-arginine deiminase FA592_02315 PF16916 Dimerisation domain of Zinc Transporter FA592_02315 PF01545 Cation efflux family FA592_02320 PF07670 Nucleoside recognition FA592_02320 PF07664 Ferrous iron transport protein B C terminus FA592_02320 PF02421 Ferrous iron transport protein B FA592_02325 PF04023 FeoA domain FA592_02330 PF00795 Carbon-nitrogen hydrolase FA592_02350 PF03459 TOBE domain FA592_02355 PF00293 NUDIX domain FA592_02360 PF01544 CorA-like Mg2+ transporter protein FA592_02365 PF04225 Opacity-associated protein A LysM-like domain FA592_02365 PF01551 Peptidase family M23 FA592_02370 PF15436 Plasminogen-binding protein pgbA N-terminal FA592_02370 PF15437 Plasminogen-binding protein pgbA C-terminal FA592_02375 PF02913 FAD linked oxidases, C-terminal domain FA592_02375 PF01565 FAD binding domain FA592_02380 PF03631 Virulence factor BrkB FA592_02390 PF03796 DnaB-like helicase C terminal domain FA592_02390 PF00772 DnaB-like helicase N terminal domain FA592_02395 PF04551 GcpE protein FA592_02400 PF18074 Primosomal protein N C-terminal domain FA592_02400 PF17764 3′ DNA-binding domain (3′BD) FA592_02400 PF00271 Helicase conserved C-terminal domain FA592_02400 PF18319 PriA DNA helicase Cys-rich region (CRR) domain FA592_02400 PF00270 DEAD/DEAH box helicase FA592_02430 PF12344 Ultra-violet resistance protein B FA592_02430 PF00271 Helicase conserved C-terminal domain FA592_02430 PF17757 UvrB interaction domain FA592_02430 PF04851 Type III restriction enzyme, res subunit FA592_02430 PF02151 UvrB/uvrC motif FA592_02440 PF13089 Polyphosphate kinase N-terminal domain FA592_02440 PF17941 Polyphosphate kinase C-terminal domain 1 FA592_02440 PF13090 Polyphosphate kinase C-terminal domain 2 FA592_02440 PF02503 Polyphosphate kinase middle domain FA592_02445 PF00132 Bacterial transferase hexapeptide (six repeats) FA592_02450 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FA592_02450 PF07733 Bacterial DNA polymerase III alpha NTPase domain FA592_02450 PF00929 Exonuclease FA592_02450 PF14579 Helix-hairpin-helix motif FA592_02450 PF02811 PHP domain FA592_02455 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FA592_02460 PF00834 Ribulose-phosphate 3 epimerase family FA592_02465 PF00830 Ribosomal L28 family FA592_02470 PF01960 ArgJ family FA592_02485 PF13277 YmdB-like protein FA592_02490 PF02559 CarD-like/TRCF domain FA592_02490 PF17757 UvrB interaction domain FA592_02490 PF00271 Helicase conserved C-terminal domain FA592_02490 PF03461 TRCF domain FA592_02490 PF00270 DEAD/DEAH box helicase FA592_02500 PF01551 Peptidase family M23 FA592_02500 PF04225 Opacity-associated protein A LysM-like domain FA592_02505 PF08245 Mur ligase middle domain FA592_02510 PF07694 5TMR of 5TMR-LYT FA592_02510 PF00990 Diguanylate cyclase, GGDEF domain FA592_02520 PF00133 tRNA synthetases class I (I, L, M and V) FA592_02520 PF09334 tRNA synthetases class I (M) FA592_02520 PF13603 Leucyl-tRNA synthetase, Domain 2 FA592_02525 PF02355 Protein export membrane protein FA592_02525 PF07549 SecD/SecF GG Motif FA592_02530 PF02355 Protein export membrane protein FA592_02535 PF02699 Preprotein translocase subunit FA592_02545 PF02772 S-adenosylmethionine synthetase, central domain FA592_02545 PF02773 S-adenosylmethionine synthetase, C-terminal domain FA592_02545 PF00438 S-adenosylmethionine synthetase, N-terminal domain FA592_02555 PF03588 Leucyl/phenylalanyl-tRNA protein transferase FA592_02560 PF17871 AAA lid domain FA592_02560 PF07724 AAA domain (Cdc48 subfamily) FA592_02560 PF02861 Clp amino terminal domain, pathogenicity island component FA592_02560 PF00004 ATPase family associated with various cellular activities (AAA) FA592_02560 PF10431 C-terminal, D2-small domain, of ClpB protein FA592_02565 PF02617 ATP-dependent Clp protease adaptor protein ClpS FA592_02575 PF01668 SmpB protein FA592_02580 PF00288 GHMP kinases N terminal domain FA592_02585 PF02599 Global regulator protein family FA592_02590 PF01509 TruB family pseudouridylate synthase (N terminal domain) FA592_02595 PF13361 UvrD-like helicase C-terminal domain FA592_02595 PF00580 UvrD/REP helicase N-terminal domain FA592_02600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FA592_02600 PF03466 LysR substrate binding domain FA592_02610 PF13359 DDE superfamily endonuclease FA592_02610 PF13613 Helix-turn-helix of DDE superfamily endonuclease FA592_02615 PF13613 Helix-turn-helix of DDE superfamily endonuclease FA592_02615 PF13359 DDE superfamily endonuclease FA592_02630 PF00425 chorismate binding enzyme FA592_02635 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FA592_02635 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FA592_02660 PF00155 Aminotransferase class I and II FA592_02660 PF00392 Bacterial regulatory proteins, gntR family FA592_02675 PF01782 RimM N-terminal domain FA592_02685 PF00886 Ribosomal protein S16 FA592_02690 PF00448 SRP54-type protein, GTPase domain FA592_02690 PF02881 SRP54-type protein, helical bundle domain FA592_02690 PF02978 Signal peptide binding domain FA592_02695 PF00849 RNA pseudouridylate synthase FA592_02700 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) FA592_02700 PF00534 Glycosyl transferases group 1 FA592_02710 PF01784 NIF3 (NGG1p interacting factor 3) FA592_02715 PF02091 Glycyl-tRNA synthetase alpha subunit FA592_02725 PF00731 AIR carboxylase FA592_02740 PF02811 PHP domain FA592_02745 PF00120 Glutamine synthetase, catalytic domain FA592_02745 PF03951 Glutamine synthetase, beta-Grasp domain FA592_02750 PF00905 Penicillin binding protein transpeptidase domain FA592_02750 PF00912 Transglycosylase FA592_02750 PF17092 Penicillin-binding protein OB-like domain FA592_02755 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FA592_02755 PF00005 ABC transporter FA592_02760 PF00155 Aminotransferase class I and II FA592_02765 PF02545 Maf-like protein FA592_02775 PF02272 DHHA1 domain FA592_02775 PF01411 tRNA synthetases class II (A) FA592_02775 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FA592_02805 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FA592_02810 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FA592_02810 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FA592_02815 PF00762 Ferrochelatase FA592_02820 PF00905 Penicillin binding protein transpeptidase domain FA592_02820 PF03717 Penicillin-binding Protein dimerisation domain FA592_02825 PF02049 Flagellar hook-basal body complex protein FliE FA592_02830 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FA592_02830 PF00460 Flagella basal body rod protein FA592_02835 PF00460 Flagella basal body rod protein FA592_02840 PF01098 Cell cycle protein FA592_02845 PF03033 Glycosyltransferase family 28 N-terminal domain FA592_02845 PF04101 Glycosyltransferase family 28 C-terminal domain FA592_02860 PF02796 Helix-turn-helix domain of resolvase FA592_02860 PF00665 Integrase core domain FA592_02875 PF07670 Nucleoside recognition FA592_02885 PF00892 EamA-like transporter family FA592_02925 PF00117 Glutamine amidotransferase class-I FA592_02940 PF09827 CRISPR associated protein Cas2 FA592_02950 PF01867 CRISPR associated protein Cas1 FA592_02955 PF02796 Helix-turn-helix domain of resolvase FA592_02955 PF00665 Integrase core domain FA592_02960 PF01695 IstB-like ATP binding protein FA592_03080 PF01145 SPFH domain / Band 7 family FA592_03100 PF00665 Integrase core domain FA592_03100 PF02796 Helix-turn-helix domain of resolvase FA592_03115 PF07690 Major Facilitator Superfamily FA592_03120 PF00501 AMP-binding enzyme FA592_03120 PF01553 Acyltransferase FA592_03125 PF01022 Bacterial regulatory protein, arsR family FA592_03135 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase FA592_03140 PF04223 Citrate lyase, alpha subunit (CitF) FA592_03145 PF03328 HpcH/HpaI aldolase/citrate lyase family FA592_03150 PF06857 Malonate decarboxylase delta subunit (MdcD) FA592_03155 PF00583 Acetyltransferase (GNAT) family FA592_03155 PF08218 Citrate lyase ligase C-terminal domain FA592_03165 PF07690 Major Facilitator Superfamily FA592_03175 PF00860 Permease family FA592_03180 PF04055 Radical SAM superfamily FA592_03190 PF02463 RecF/RecN/SMC N terminal domain FA592_03200 PF00291 Pyridoxal-phosphate dependent enzyme FA592_03210 PF01909 Nucleotidyltransferase domain FA592_03210 PF01966 HD domain FA592_03210 PF01842 ACT domain FA592_03210 PF08335 GlnD PII-uridylyltransferase FA592_03215 PF01380 SIS domain FA592_03220 PF00990 Diguanylate cyclase, GGDEF domain FA592_03240 PF00990 Diguanylate cyclase, GGDEF domain FA592_03240 PF00563 EAL domain FA592_03240 PF13426 PAS domain FA592_03250 PF00027 Cyclic nucleotide-binding domain FA592_03250 PF00520 Ion transport protein FA592_03270 PF12848 ABC transporter FA592_03270 PF00005 ABC transporter FA592_03275 PF12833 Helix-turn-helix domain FA592_03275 PF00072 Response regulator receiver domain FA592_03280 PF08448 PAS fold FA592_03280 PF08447 PAS fold FA592_03280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA592_03285 PF13247 4Fe-4S dicluster domain FA592_03290 PF03063 Prismane/CO dehydrogenase family FA592_03295 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FA592_03300 PF13247 4Fe-4S dicluster domain FA592_03310 PF00146 NADH dehydrogenase FA592_03315 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FA592_03320 PF00361 Proton-conducting membrane transporter FA592_03320 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FA592_03325 PF00374 Nickel-dependent hydrogenase FA592_03325 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FA592_03325 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FA592_03335 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FA592_03370 PF00899 ThiF family FA592_03375 PF00072 Response regulator receiver domain FA592_03375 PF00990 Diguanylate cyclase, GGDEF domain FA592_03385 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle FA592_03385 PF14602 Hexapeptide repeat of succinyl-transferase FA592_03390 PF10609 NUBPL iron-transfer P-loop NTPase FA592_03390 PF01883 Iron-sulfur cluster assembly protein FA592_03395 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase FA592_03395 PF02542 YgbB family FA592_03405 PF01747 ATP-sulfurylase FA592_03405 PF14306 PUA-like domain FA592_03415 PF04264 YceI-like domain FA592_03420 PF09186 Domain of unknown function (DUF1949) FA592_03420 PF01205 Uncharacterized protein family UPF0029 FA592_03425 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain FA592_03425 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain FA592_03430 PF00528 Binding-protein-dependent transport system inner membrane component FA592_03440 PF08402 TOBE domain FA592_03440 PF00005 ABC transporter FA592_03445 PF00528 Binding-protein-dependent transport system inner membrane component FA592_03460 PF03459 TOBE domain FA592_03460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FA592_03465 PF07943 Penicillin-binding protein 5, C-terminal domain FA592_03465 PF00768 D-alanyl-D-alanine carboxypeptidase FA592_03470 PF03807 NADP oxidoreductase coenzyme F420-dependent FA592_03470 PF14748 Pyrroline-5-carboxylate reductase dimerisation FA592_03475 PF00005 ABC transporter FA592_03475 PF02687 FtsX-like permease family FA592_03475 PF12704 MacB-like periplasmic core domain FA592_03480 PF00005 ABC transporter FA592_03505 PF00924 Mechanosensitive ion channel FA592_03505 PF05552 Conserved TM helix FA592_03510 PF00563 EAL domain FA592_03510 PF03707 Bacterial signalling protein N terminal repeat FA592_03510 PF00990 Diguanylate cyclase, GGDEF domain FA592_03635 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FA592_03640 PF01029 NusB family FA592_03645 PF00885 6,7-dimethyl-8-ribityllumazine synthase FA592_03655 PF00793 DAHP synthetase I family FA592_03660 PF00892 EamA-like transporter family FA592_03665 PF00924 Mechanosensitive ion channel FA592_03670 PF01926 50S ribosome-binding GTPase FA592_03670 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FA592_03675 PF01202 Shikimate kinase FA592_03680 PF00579 tRNA synthetases class I (W and Y) FA592_03685 PF02403 Seryl-tRNA synthetase N-terminal domain FA592_03685 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FA592_03695 PF00682 HMGL-like FA592_03695 PF08502 LeuA allosteric (dimerisation) domain FA592_03700 PF01066 CDP-alcohol phosphatidyltransferase FA592_03710 PF01434 Peptidase family M41 FA592_03710 PF00004 ATPase family associated with various cellular activities (AAA) FA592_03710 PF17862 AAA+ lid domain FA592_03720 PF00072 Response regulator receiver domain FA592_03725 PF00977 Histidine biosynthesis protein FA592_03730 PF00117 Glutamine amidotransferase class-I FA592_03745 PF02719 Polysaccharide biosynthesis protein FA592_03750 PF00953 Glycosyl transferase family 4 FA592_03755 PF01370 NAD dependent epimerase/dehydratase family FA592_03760 PF00535 Glycosyl transferase family 2 FA592_03765 PF01501 Glycosyl transferase family 8 FA592_03765 PF00535 Glycosyl transferase family 2 FA592_03770 PF00535 Glycosyl transferase family 2 FA592_03775 PF14602 Hexapeptide repeat of succinyl-transferase FA592_03775 PF12464 Maltose acetyltransferase FA592_03780 PF00535 Glycosyl transferase family 2 FA592_03790 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FA592_03800 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FA592_03800 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FA592_03800 PF00205 Thiamine pyrophosphate enzyme, central domain FA592_03805 PF16363 GDP-mannose 4,6 dehydratase FA592_03810 PF00483 Nucleotidyl transferase FA592_03815 PF04321 RmlD substrate binding domain FA592_03820 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase FA592_03825 PF14743 DNA ligase OB-like domain FA592_03825 PF01068 ATP dependent DNA ligase domain FA592_03830 PF16363 GDP-mannose 4,6 dehydratase FA592_03835 PF00483 Nucleotidyl transferase FA592_03840 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FA592_03840 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FA592_03840 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FA592_03840 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FA592_03850 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FA592_03865 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FA592_03885 PF13580 SIS domain FA592_03890 PF01467 Cytidylyltransferase-like FA592_03890 PF00294 pfkB family carbohydrate kinase FA592_03895 PF01370 NAD dependent epimerase/dehydratase family FA592_03900 PF08645 Polynucleotide kinase 3 phosphatase FA592_03925 PF00563 EAL domain FA592_03925 PF00990 Diguanylate cyclase, GGDEF domain FA592_03925 PF08448 PAS fold FA592_03930 PF00892 EamA-like transporter family FA592_03940 PF17158 Membrane-associated sensor, integral membrane domain FA592_03940 PF00990 Diguanylate cyclase, GGDEF domain FA592_03945 PF08534 Redoxin FA592_03960 PF00677 Lumazine binding domain FA592_03965 PF00672 HAMP domain FA592_03965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA592_03965 PF02743 Cache domain FA592_03970 PF02626 Carboxyltransferase domain, subdomain A and B FA592_03980 PF03746 LamB/YcsF family FA592_03985 PF01134 Glucose inhibited division protein A FA592_03985 PF13932 GidA associated domain FA592_03990 PF00355 Rieske [2Fe-2S] domain FA592_03990 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal FA592_03995 PF00032 Cytochrome b(C-terminal)/b6/petD FA592_03995 PF00033 Cytochrome b/b6/petB FA592_04000 PF02167 Cytochrome C1 family FA592_04010 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FA592_04015 PF02801 Beta-ketoacyl synthase, C-terminal domain FA592_04015 PF00109 Beta-ketoacyl synthase, N-terminal domain FA592_04020 PF00550 Phosphopantetheine attachment site FA592_04030 PF01676 Metalloenzyme superfamily FA592_04030 PF06415 BPG-independent PGAM N-terminus (iPGM_N) FA592_04035 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 FA592_04035 PF00953 Glycosyl transferase family 4 FA592_04040 PF08245 Mur ligase middle domain FA592_04050 PF02397 Bacterial sugar transferase FA592_04055 PF00534 Glycosyl transferases group 1 FA592_04055 PF13439 Glycosyltransferase Family 4 FA592_04060 PF00534 Glycosyl transferases group 1 FA592_04060 PF13439 Glycosyltransferase Family 4 FA592_04065 PF01370 NAD dependent epimerase/dehydratase family FA592_04070 PF16363 GDP-mannose 4,6 dehydratase FA592_04085 PF00535 Glycosyl transferase family 2 FA592_04095 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FA592_04100 PF00550 Phosphopantetheine attachment site FA592_04105 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FA592_04105 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FA592_04115 PF05523 WxcM-like, C-terminal FA592_04125 PF16363 GDP-mannose 4,6 dehydratase FA592_04130 PF00483 Nucleotidyl transferase FA592_04150 PF13847 Methyltransferase domain FA592_04150 PF00069 Protein kinase domain FA592_04155 PF00005 ABC transporter FA592_04165 PF00483 Nucleotidyl transferase FA592_04165 PF01050 Mannose-6-phosphate isomerase FA592_04170 PF16363 GDP-mannose 4,6 dehydratase FA592_04175 PF01568 Molydopterin dinucleotide binding domain FA592_04175 PF00384 Molybdopterin oxidoreductase FA592_04175 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FA592_04185 PF13247 4Fe-4S dicluster domain FA592_04190 PF08448 PAS fold FA592_04190 PF08447 PAS fold FA592_04190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA592_04195 PF00072 Response regulator receiver domain FA592_04195 PF00486 Transcriptional regulatory protein, C terminal FA592_04210 PF09335 SNARE associated Golgi protein FA592_04215 PF12792 CSS motif domain associated with EAL FA592_04215 PF00563 EAL domain FA592_04230 PF03649 Uncharacterised protein family (UPF0014) FA592_04235 PF02785 Biotin carboxylase C-terminal domain FA592_04235 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FA592_04235 PF00289 Biotin carboxylase, N-terminal domain FA592_04250 PF00271 Helicase conserved C-terminal domain FA592_04250 PF00270 DEAD/DEAH box helicase FA592_04255 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 FA592_04260 PF00248 Aldo/keto reductase family FA592_04265 PF07690 Major Facilitator Superfamily FA592_04270 PF12833 Helix-turn-helix domain FA592_04270 PF06719 AraC-type transcriptional regulator N-terminus FA592_04275 PF12706 Beta-lactamase superfamily domain FA592_04285 PF12849 PBP superfamily domain FA592_04290 PF00528 Binding-protein-dependent transport system inner membrane component FA592_04295 PF00528 Binding-protein-dependent transport system inner membrane component FA592_04300 PF00005 ABC transporter FA592_04305 PF12729 Four helix bundle sensory module for signal transduction FA592_04305 PF00672 HAMP domain FA592_04305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA592_04310 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase FA592_04315 PF00672 HAMP domain FA592_04315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA592_04325 PF01895 PhoU domain FA592_04330 PF00072 Response regulator receiver domain FA592_04330 PF00486 Transcriptional regulatory protein, C terminal FA592_04335 PF00989 PAS fold FA592_04335 PF00512 His Kinase A (phospho-acceptor) domain FA592_04335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA592_04335 PF11808 Phosphate regulon sensor protein PhoR FA592_04340 PF03061 Thioesterase superfamily FA592_04360 PF01638 HxlR-like helix-turn-helix FA592_04365 PF02525 Flavodoxin-like fold FA592_04370 PF02743 Cache domain FA592_04370 PF00512 His Kinase A (phospho-acceptor) domain FA592_04370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA592_04375 PF06508 Queuosine biosynthesis protein QueC FA592_04380 PF04055 Radical SAM superfamily FA592_04410 PF02562 PhoH-like protein FA592_04420 PF07690 Major Facilitator Superfamily FA592_04425 PF07690 Major Facilitator Superfamily FA592_04430 PF02321 Outer membrane efflux protein FA592_04435 PF00873 AcrB/AcrD/AcrF family FA592_04440 PF00529 HlyD membrane-fusion protein of T1SS FA592_04440 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FA592_04455 PF01243 Pyridoxamine 5'-phosphate oxidase FA592_04460 PF00375 Sodium:dicarboxylate symporter family FA592_04465 PF02664 S-Ribosylhomocysteinase (LuxS) FA592_04490 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II FA592_04490 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase FA592_04490 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg FA592_04490 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FA592_04490 PF10371 Domain of unknown function FA592_04495 PF13419 Haloacid dehalogenase-like hydrolase FA592_04500 PF00939 Sodium:sulfate symporter transmembrane region FA592_04515 PF00691 OmpA family FA592_04515 PF05736 OprF membrane domain FA592_04520 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FA592_04530 PF12833 Helix-turn-helix domain FA592_04530 PF06719 AraC-type transcriptional regulator N-terminus FA592_04535 PF00958 GMP synthase C terminal domain FA592_04535 PF00117 Glutamine amidotransferase class-I FA592_04535 PF13302 Acetyltransferase (GNAT) domain FA592_04535 PF13673 Acetyltransferase (GNAT) domain FA592_04535 PF03352 Methyladenine glycosylase FA592_04555 PF00465 Iron-containing alcohol dehydrogenase FA592_04570 PF02222 ATP-grasp domain FA592_04580 PF03091 CutA1 divalent ion tolerance protein FA592_04585 PF00380 Ribosomal protein S9/S16 FA592_04590 PF00572 Ribosomal protein L13 FA592_04595 PF13361 UvrD-like helicase C-terminal domain FA592_04595 PF00580 UvrD/REP helicase N-terminal domain FA592_04595 PF12705 PD-(D/E)XK nuclease superfamily FA592_04620 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP FA592_04620 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FA592_04635 PF00115 Cytochrome C and Quinol oxidase polypeptide I FA592_04640 PF00072 Response regulator receiver domain FA592_04640 PF00486 Transcriptional regulatory protein, C terminal FA592_04645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA592_04645 PF08448 PAS fold FA592_04645 PF08447 PAS fold FA592_04655 PF00117 Glutamine amidotransferase class-I FA592_04655 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain FA592_04675 PF00709 Adenylosuccinate synthetase FA592_04680 PF13393 Histidyl-tRNA synthetase FA592_04685 PF00266 Aminotransferase class-V FA592_04690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA592_04690 PF02743 Cache domain FA592_04690 PF00672 HAMP domain FA592_04695 PF00672 HAMP domain FA592_04695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA592_04695 PF02743 Cache domain FA592_04700 PF13419 Haloacid dehalogenase-like hydrolase FA592_04705 PF00456 Transketolase, thiamine diphosphate binding domain FA592_04705 PF02780 Transketolase, C-terminal domain FA592_04705 PF02779 Transketolase, pyrimidine binding domain FA592_04710 PF00348 Polyprenyl synthetase FA592_04715 PF00595 PDZ domain FA592_04720 PF02575 YbaB/EbfC DNA-binding family FA592_04725 PF02261 Aspartate decarboxylase FA592_04730 PF08245 Mur ligase middle domain FA592_04730 PF02875 Mur ligase family, glutamate ligase domain FA592_04745 PF01196 Ribosomal protein L17 FA592_04750 PF01000 RNA polymerase Rpb3/RpoA insert domain FA592_04750 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain FA592_04750 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain FA592_04755 PF01479 S4 domain FA592_04755 PF00163 Ribosomal protein S4/S9 N-terminal domain FA592_04760 PF00411 Ribosomal protein S11 FA592_04765 PF00416 Ribosomal protein S13/S18 FA592_04770 PF00444 Ribosomal protein L36 FA592_04775 PF01176 Translation initiation factor 1A / IF-1 FA592_04780 PF00557 Metallopeptidase family M24 FA592_04785 PF00344 SecY translocase FA592_04790 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A FA592_04795 PF00333 Ribosomal protein S5, N-terminal domain FA592_04795 PF03719 Ribosomal protein S5, C-terminal domain FA592_04800 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast FA592_04805 PF00347 Ribosomal protein L6 FA592_04810 PF00410 Ribosomal protein S8 FA592_04815 PF00253 Ribosomal protein S14p/S29e FA592_04820 PF00281 Ribosomal protein L5 FA592_04820 PF00673 ribosomal L5P family C-terminus FA592_04825 PF00467 KOW motif FA592_04825 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 FA592_04830 PF00238 Ribosomal protein L14p/L23e FA592_04835 PF00366 Ribosomal protein S17 FA592_04840 PF00831 Ribosomal L29 protein FA592_04845 PF00252 Ribosomal protein L16p/L10e FA592_04850 PF07650 KH domain FA592_04850 PF00189 Ribosomal protein S3, C-terminal domain FA592_04855 PF00237 Ribosomal protein L22p/L17e FA592_04860 PF00203 Ribosomal protein S19 FA592_04865 PF00181 Ribosomal Proteins L2, RNA binding domain FA592_04865 PF03947 Ribosomal Proteins L2, C-terminal domain FA592_04870 PF00276 Ribosomal protein L23 FA592_04875 PF00573 Ribosomal protein L4/L1 family FA592_04880 PF00297 Ribosomal protein L3 FA592_04885 PF00338 Ribosomal protein S10p/S20e FA592_04900 PF01351 Ribonuclease HII FA592_04905 PF03239 Iron permease FTR1 family FA592_04910 PF10634 Fe2+ transport protein FA592_04930 PF02687 FtsX-like permease family FA592_04930 PF12704 MacB-like periplasmic core domain FA592_04930 PF00005 ABC transporter FA592_04950 PF02421 Ferrous iron transport protein B FA592_04950 PF07670 Nucleoside recognition FA592_04950 PF07664 Ferrous iron transport protein B C terminus FA592_04955 PF01264 Chorismate synthase FA592_04960 PF14622 Ribonuclease-III-like FA592_04960 PF00035 Double-stranded RNA binding motif FA592_04965 PF00075 RNase H FA592_04975 PF08275 DNA primase catalytic core, N-terminal domain FA592_04975 PF13662 Toprim domain FA592_04975 PF16730 DnaG-primase C-terminal, helicase-binding domain FA592_04975 PF01807 CHC2 zinc finger FA592_04980 PF00764 Arginosuccinate synthase FA592_04985 PF00072 Response regulator receiver domain FA592_04995 PF03707 Bacterial signalling protein N terminal repeat FA592_04995 PF00990 Diguanylate cyclase, GGDEF domain FA592_04995 PF00563 EAL domain FA592_05000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA592_05000 PF00512 His Kinase A (phospho-acceptor) domain FA592_05000 PF01627 Hpt domain FA592_05000 PF00672 HAMP domain FA592_05000 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FA592_05000 PF00072 Response regulator receiver domain FA592_05005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA592_05005 PF00512 His Kinase A (phospho-acceptor) domain FA592_05010 PF00072 Response regulator receiver domain FA592_05010 PF01339 CheB methylesterase FA592_05015 PF03975 CheD chemotactic sensory transduction FA592_05025 PF13359 DDE superfamily endonuclease FA592_05025 PF13613 Helix-turn-helix of DDE superfamily endonuclease FA592_05030 PF13613 Helix-turn-helix of DDE superfamily endonuclease FA592_05030 PF13359 DDE superfamily endonuclease FA592_05040 PF03705 CheR methyltransferase, all-alpha domain FA592_05040 PF01739 CheR methyltransferase, SAM binding domain FA592_05045 PF01584 CheW-like domain FA592_05045 PF02895 Signal transducing histidine kinase, homodimeric domain FA592_05045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA592_05045 PF07194 P2 response regulator binding domain FA592_05045 PF01627 Hpt domain FA592_05055 PF00672 HAMP domain FA592_05055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA592_05055 PF02203 Tar ligand binding domain homologue FA592_05060 PF01584 CheW-like domain FA592_05065 PF00072 Response regulator receiver domain FA592_05070 PF00226 DnaJ domain FA592_05070 PF01556 DnaJ C terminal domain FA592_05070 PF00684 DnaJ central domain FA592_05095 PF03824 High-affinity nickel-transport protein FA592_05100 PF03824 High-affinity nickel-transport protein FA592_05110 PF00258 Flavodoxin FA592_05120 PF01810 LysE type translocator FA592_05125 PF08338 Domain of unknown function (DUF1731) FA592_05125 PF01370 NAD dependent epimerase/dehydratase family FA592_05140 PF12704 MacB-like periplasmic core domain FA592_05140 PF02687 FtsX-like permease family FA592_05140 PF00005 ABC transporter FA592_05155 PF01810 LysE type translocator FA592_05165 PF03707 Bacterial signalling protein N terminal repeat FA592_05165 PF00990 Diguanylate cyclase, GGDEF domain FA592_05165 PF00563 EAL domain FA592_05170 PF00892 EamA-like transporter family FA592_05175 PF00072 Response regulator receiver domain FA592_05175 PF00486 Transcriptional regulatory protein, C terminal FA592_05180 PF00672 HAMP domain FA592_05180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA592_05180 PF00512 His Kinase A (phospho-acceptor) domain FA592_05185 PF08019 Phosphoethanolamine transferase EptA/EptB FA592_05185 PF00884 Sulfatase FA592_05195 PF00563 EAL domain FA592_05195 PF12792 CSS motif domain associated with EAL FA592_05210 PF02673 Bacitracin resistance protein BacA FA592_05215 PF01613 Flavin reductase like domain FA592_05220 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component FA592_05225 PF01869 BadF/BadG/BcrA/BcrD ATPase family FA592_05245 PF10415 Fumarase C C-terminus FA592_05245 PF00206 Lyase FA592_05260 PF17763 Glutaminase/Asparaginase C-terminal domain FA592_05260 PF00710 Asparaginase, N-terminal FA592_05265 PF00512 His Kinase A (phospho-acceptor) domain FA592_05265 PF00989 PAS fold FA592_05265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA592_05270 PF00486 Transcriptional regulatory protein, C terminal FA592_05270 PF00072 Response regulator receiver domain FA592_05275 PF02492 CobW/HypB/UreG, nucleotide-binding domain FA592_05280 PF01730 UreF FA592_05285 PF05194 UreE urease accessory protein, C-terminal domain FA592_05290 PF00449 Urease alpha-subunit, N-terminal domain FA592_05290 PF01979 Amidohydrolase family FA592_05295 PF00547 Urease, gamma subunit FA592_05295 PF00699 Urease beta subunit FA592_05300 PF01774 UreD urease accessory protein FA592_05305 PF00005 ABC transporter FA592_05310 PF12399 Branched-chain amino acid ATP-binding cassette transporter FA592_05310 PF00005 ABC transporter FA592_05320 PF02653 Branched-chain amino acid transport system / permease component FA592_05330 PF00512 His Kinase A (phospho-acceptor) domain FA592_05330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA592_05330 PF09308 LuxQ, periplasmic FA592_05330 PF00072 Response regulator receiver domain FA592_05335 PF00486 Transcriptional regulatory protein, C terminal FA592_05335 PF00072 Response regulator receiver domain FA592_05340 PF00486 Transcriptional regulatory protein, C terminal FA592_05340 PF00072 Response regulator receiver domain FA592_05350 PF07726 ATPase family associated with various cellular activities (AAA) FA592_05350 PF17863 AAA lid domain FA592_05355 PF01882 Protein of unknown function DUF58 FA592_05365 PF00092 von Willebrand factor type A domain FA592_05395 PF00528 Binding-protein-dependent transport system inner membrane component FA592_05425 PF00817 impB/mucB/samB family FA592_05425 PF11799 impB/mucB/samB family C-terminal domain FA592_05425 PF11798 IMS family HHH motif FA592_05430 PF00690 Cation transporter/ATPase, N-terminus FA592_05430 PF00689 Cation transporting ATPase, C-terminus FA592_05435 PF16916 Dimerisation domain of Zinc Transporter FA592_05435 PF01545 Cation efflux family FA592_05470 PF02769 AIR synthase related protein, C-terminal domain FA592_05470 PF00586 AIR synthase related protein, N-terminal domain FA592_05475 PF01206 Sulfurtransferase TusA FA592_05485 PF00497 Bacterial extracellular solute-binding proteins, family 3 FA592_05485 PF01464 Transglycosylase SLT domain FA592_05490 PF08448 PAS fold FA592_05490 PF00990 Diguanylate cyclase, GGDEF domain FA592_05490 PF00563 EAL domain FA592_05490 PF08447 PAS fold FA592_05490 PF05231 MASE1 FA592_05490 PF13426 PAS domain FA592_05500 PF07690 Major Facilitator Superfamily FA592_05525 PF00005 ABC transporter FA592_05530 PF00528 Binding-protein-dependent transport system inner membrane component FA592_05535 PF12849 PBP superfamily domain FA592_05545 PF02634 FdhD/NarQ family FA592_05555 PF13247 4Fe-4S dicluster domain FA592_05575 PF07715 TonB-dependent Receptor Plug Domain FA592_05575 PF07660 Secretin and TonB N terminus short domain FA592_05575 PF00593 TonB dependent receptor FA592_05580 PF00005 ABC transporter FA592_05595 PF00296 Luciferase-like monooxygenase FA592_05610 PF02472 Biopolymer transport protein ExbD/TolR FA592_05615 PF01618 MotA/TolQ/ExbB proton channel family FA592_05620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FA592_05620 PF03459 TOBE domain FA592_05640 PF13649 Methyltransferase domain FA592_05645 PF03459 TOBE domain FA592_05650 PF17850 CysA C-terminal regulatory domain FA592_05650 PF12857 TOBE-like domain FA592_05650 PF00005 ABC transporter FA592_05655 PF00528 Binding-protein-dependent transport system inner membrane component FA592_05660 PF00528 Binding-protein-dependent transport system inner membrane component FA592_05670 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FA592_05700 PF00665 Integrase core domain FA592_05700 PF02796 Helix-turn-helix domain of resolvase FA592_05710 PF13247 4Fe-4S dicluster domain FA592_05740 PF00512 His Kinase A (phospho-acceptor) domain FA592_05740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA592_05740 PF13493 Domain of unknown function (DUF4118) FA592_05740 PF02702 Osmosensitive K+ channel His kinase sensor domain FA592_05750 PF03841 L-seryl-tRNA selenium transferase FA592_05755 PF09105 Elongation factor SelB, winged helix FA592_05755 PF00009 Elongation factor Tu GTP binding domain FA592_05755 PF09106 Elongation factor SelB, winged helix FA592_05755 PF09107 Elongation factor SelB, winged helix FA592_05755 PF03144 Elongation factor Tu domain 2 FA592_05770 PF04264 YceI-like domain FA592_05775 PF17954 Quercetinase C-terminal cupin domain FA592_05775 PF02678 Pirin FA592_05810 PF00072 Response regulator receiver domain FA592_05810 PF00486 Transcriptional regulatory protein, C terminal FA592_05820 PF01965 DJ-1/PfpI family FA592_05825 PF07977 FabA-like domain FA592_05830 PF00535 Glycosyl transferase family 2 FA592_05860 PF00501 AMP-binding enzyme FA592_05860 PF13193 AMP-binding enzyme C-terminal domain FA592_05860 PF16177 Acetyl-coenzyme A synthetase N-terminus FA592_05870 PF12697 Alpha/beta hydrolase family FA592_05885 PF02801 Beta-ketoacyl synthase, C-terminal domain FA592_05885 PF00109 Beta-ketoacyl synthase, N-terminal domain FA592_05890 PF00550 Phosphopantetheine attachment site FA592_05895 PF00270 DEAD/DEAH box helicase FA592_05895 PF00271 Helicase conserved C-terminal domain FA592_05925 PF01841 Transglutaminase-like superfamily FA592_05935 PF02086 D12 class N6 adenine-specific DNA methyltransferase FA592_05940 PF00072 Response regulator receiver domain FA592_05945 PF01425 Amidase FA592_05950 PF01425 Amidase FA592_05960 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FA592_05960 PF00289 Biotin carboxylase, N-terminal domain FA592_05960 PF02785 Biotin carboxylase C-terminal domain FA592_05975 PF00005 ABC transporter FA592_05980 PF00528 Binding-protein-dependent transport system inner membrane component FA592_05995 PF00072 Response regulator receiver domain FA592_05995 PF00486 Transcriptional regulatory protein, C terminal FA592_06020 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FA592_06025 PF00672 HAMP domain FA592_06025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA592_06030 PF00106 short chain dehydrogenase FA592_06040 PF03435 Saccharopine dehydrogenase NADP binding domain FA592_06040 PF16653 Saccharopine dehydrogenase C-terminal domain FA592_06045 PF01725 Ham1 family FA592_06055 PF07690 Major Facilitator Superfamily FA592_06060 PF09335 SNARE associated Golgi protein FA592_06075 PF00939 Sodium:sulfate symporter transmembrane region FA592_06090 PF00994 Probable molybdopterin binding domain FA592_06090 PF03454 MoeA C-terminal region (domain IV) FA592_06090 PF03453 MoeA N-terminal region (domain I and II) FA592_06095 PF02391 MoaE protein FA592_06105 PF01106 NifU-like domain FA592_06105 PF04324 BFD-like [2Fe-2S] binding domain FA592_06105 PF01592 NifU-like N terminal domain FA592_06110 PF00266 Aminotransferase class-V FA592_06115 PF18269 T3SS EscN ATPase C-terminal domain FA592_06115 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FA592_06120 PF01227 GTP cyclohydrolase I FA592_06125 PF05697 Bacterial trigger factor protein (TF) FA592_06125 PF05698 Bacterial trigger factor protein (TF) C-terminus FA592_06125 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FA592_06130 PF00574 Clp protease FA592_06140 PF01327 Polypeptide deformylase FA592_06145 PF13335 Magnesium chelatase, subunit ChlI C-terminal FA592_06145 PF01078 Magnesium chelatase, subunit ChlI FA592_06150 PF03853 YjeF-related protein N-terminus FA592_06150 PF01256 Carbohydrate kinase FA592_06155 PF00551 Formyl transferase FA592_06160 PF05690 Thiazole biosynthesis protein ThiG FA592_06190 PF14659 Phage integrase, N-terminal SAM-like domain FA592_06190 PF00589 Phage integrase family FA592_06205 PF01420 Type I restriction modification DNA specificity domain FA592_06210 PF12161 HsdM N-terminal domain FA592_06210 PF02384 N-6 DNA Methylase FA592_06225 PF00665 Integrase core domain FA592_06225 PF02796 Helix-turn-helix domain of resolvase FA592_06270 PF13533 Biotin-lipoyl like FA592_06275 PF00873 AcrB/AcrD/AcrF family FA592_06280 PF00873 AcrB/AcrD/AcrF family FA592_06285 PF02321 Outer membrane efflux protein FA592_06285 PF08139 Prokaryotic membrane lipoprotein lipid attachment site FA592_06295 PF00535 Glycosyl transferase family 2 FA592_06300 PF04794 YdjC-like protein FA592_06310 PF01569 PAP2 superfamily FA592_06325 PF00171 Aldehyde dehydrogenase family FA592_06340 PF01842 ACT domain FA592_06340 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FA592_06340 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FA592_06360 PF03824 High-affinity nickel-transport protein FA592_06365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA592_06365 PF12729 Four helix bundle sensory module for signal transduction FA592_06365 PF00672 HAMP domain FA592_06370 PF00575 S1 RNA binding domain FA592_06370 PF17674 HHH domain FA592_06370 PF09371 Tex-like protein N-terminal domain FA592_06370 PF16921 Tex protein YqgF-like domain FA592_06400 PF00005 ABC transporter FA592_06405 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FA592_06415 PF00881 Nitroreductase family FA592_06460 PF02687 FtsX-like permease family FA592_06465 PF00005 ABC transporter FA592_06475 PF01915 Glycosyl hydrolase family 3 C-terminal domain FA592_06475 PF00933 Glycosyl hydrolase family 3 N terminal domain FA592_06505 PF03358 NADPH-dependent FMN reductase FA592_06510 PF01047 MarR family FA592_06515 PF00106 short chain dehydrogenase FA592_06525 PF00873 AcrB/AcrD/AcrF family FA592_06530 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FA592_06530 PF00529 HlyD membrane-fusion protein of T1SS FA592_06565 PF00563 EAL domain FA592_06565 PF03707 Bacterial signalling protein N terminal repeat FA592_06565 PF00990 Diguanylate cyclase, GGDEF domain FA592_06570 PF00072 Response regulator receiver domain FA592_06570 PF00486 Transcriptional regulatory protein, C terminal FA592_06575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA592_06585 PF01507 Phosphoadenosine phosphosulfate reductase family FA592_06590 PF01507 Phosphoadenosine phosphosulfate reductase family FA592_06595 PF00009 Elongation factor Tu GTP binding domain FA592_06605 PF00899 ThiF family FA592_06615 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FA592_06615 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FA592_06620 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FA592_06620 PF14824 Sirohaem biosynthesis protein central FA592_06620 PF10414 Sirohaem synthase dimerisation region FA592_06625 PF01053 Cys/Met metabolism PLP-dependent enzyme FA592_06655 PF08448 PAS fold FA592_06655 PF00990 Diguanylate cyclase, GGDEF domain FA592_06665 PF01451 Low molecular weight phosphotyrosine protein phosphatase FA592_06675 PF03741 Integral membrane protein TerC family FA592_06680 PF02621 Menaquinone biosynthesis FA592_06685 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FA592_06685 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FA592_06695 PF00390 Malic enzyme, N-terminal domain FA592_06695 PF03949 Malic enzyme, NAD binding domain FA592_06695 PF01515 Phosphate acetyl/butaryl transferase FA592_06700 PF00749 tRNA synthetases class I (E and Q), catalytic domain FA592_06710 PF02785 Biotin carboxylase C-terminal domain FA592_06710 PF00289 Biotin carboxylase, N-terminal domain FA592_06710 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FA592_06715 PF00364 Biotin-requiring enzyme FA592_06720 PF00692 dUTPase FA592_06740 PF17785 PUA-like domain FA592_06740 PF10672 S-adenosylmethionine-dependent methyltransferase FA592_06745 PF12146 Serine aminopeptidase, S33 FA592_06755 PF00669 Bacterial flagellin N-terminal helical region FA592_06760 PF02719 Polysaccharide biosynthesis protein FA592_06765 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FA592_06770 PF02348 Cytidylyltransferase FA592_06780 PF13649 Methyltransferase domain FA592_06785 PF08666 SAF domain FA592_06785 PF03102 NeuB family FA592_06790 PF13302 Acetyltransferase (GNAT) domain FA592_06815 PF00669 Bacterial flagellin N-terminal helical region FA592_06815 PF00700 Bacterial flagellin C-terminal helical region FA592_06815 PF07196 Flagellin hook IN motif FA592_06815 PF00700 Bacterial flagellin C-terminal helical region FA592_06815 PF00669 Bacterial flagellin N-terminal helical region FA592_06815 PF07196 Flagellin hook IN motif FA592_06820 PF01396 Topoisomerase DNA binding C4 zinc finger FA592_06820 PF01131 DNA topoisomerase FA592_06820 PF01751 Toprim domain FA592_06825 PF04055 Radical SAM superfamily FA592_06825 PF06968 Biotin and Thiamin Synthesis associated domain FA592_06830 PF00285 Citrate synthase, C-terminal domain FA592_06845 PF00113 Enolase, C-terminal TIM barrel domain FA592_06845 PF03952 Enolase, N-terminal domain FA592_06850 PF00154 recA bacterial DNA recombination protein FA592_06855 PF02621 Menaquinone biosynthesis FA592_06860 PF01313 Bacterial export proteins, family 3 FA592_06865 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FA592_06875 PF00814 Glycoprotease family FA592_06885 PF03707 Bacterial signalling protein N terminal repeat FA592_06885 PF00990 Diguanylate cyclase, GGDEF domain FA592_06885 PF00563 EAL domain FA592_06905 PF00149 Calcineurin-like phosphoesterase FA592_06910 PF01235 Sodium:alanine symporter family FA592_06915 PF00860 Permease family FA592_06920 PF13288 DXP reductoisomerase C-terminal domain FA592_06920 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain FA592_06920 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase FA592_06945 PF12833 Helix-turn-helix domain FA592_06945 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FA592_06945 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FA592_06945 PF02805 Metal binding domain of Ada FA592_06960 PF00027 Cyclic nucleotide-binding domain FA592_06960 PF13545 Crp-like helix-turn-helix domain FA592_06970 PF00330 Aconitase family (aconitate hydratase) FA592_06975 PF12804 MobA-like NTP transferase domain FA592_07000 PF02253 Phospholipase A1 FA592_07010 PF01967 MoaC family FA592_07015 PF04359 Protein of unknown function (DUF493) FA592_07075 PF01027 Inhibitor of apoptosis-promoting Bax1 FA592_07090 PF13247 4Fe-4S dicluster domain FA592_07090 PF00037 4Fe-4S binding domain FA592_07095 PF10518 TAT (twin-arginine translocation) pathway signal sequence FA592_07095 PF01568 Molydopterin dinucleotide binding domain FA592_07095 PF00384 Molybdopterin oxidoreductase FA592_07095 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FA592_07100 PF13649 Methyltransferase domain FA592_07115 PF00211 Adenylate and Guanylate cyclase catalytic domain FA592_07120 PF01966 HD domain FA592_07125 PF03840 Preprotein translocase SecG subunit FA592_07135 PF01765 Ribosome recycling factor FA592_07140 PF00156 Phosphoribosyl transferase domain FA592_07165 PF04011 LemA family FA592_07180 PF03963 Flagellar hook capping protein - N-terminal region FA592_07185 PF00460 Flagella basal body rod protein FA592_07185 PF07196 Flagellin hook IN motif FA592_07185 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FA592_07185 PF07559 Flagellar basal body protein FlaE FA592_07190 PF00460 Flagella basal body rod protein FA592_07190 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FA592_07190 PF07559 Flagellar basal body protein FlaE FA592_07190 PF07196 Flagellin hook IN motif FA592_07195 PF02511 Thymidylate synthase complementing protein FA592_07200 PF02075 Crossover junction endodeoxyribonuclease RuvC FA592_07205 PF08299 Bacterial dnaA protein helix-turn-helix FA592_07205 PF00308 Bacterial dnaA protein FA592_07205 PF11638 DnaA N-terminal domain FA592_07210 PF02768 DNA polymerase III beta subunit, C-terminal domain FA592_07210 PF00712 DNA polymerase III beta subunit, N-terminal domain FA592_07210 PF02767 DNA polymerase III beta subunit, central domain FA592_07240 PF03167 Uracil DNA glycosylase superfamily FA592_07245 PF00730 HhH-GPD superfamily base excision DNA repair protein FA592_07245 PF00633 Helix-hairpin-helix motif FA592_07245 PF14815 NUDIX domain FA592_07250 PF07690 Major Facilitator Superfamily FA592_07255 PF00939 Sodium:sulfate symporter transmembrane region FA592_07260 PF05681 Fumarate hydratase (Fumerase) FA592_07265 PF05683 Fumarase C-terminus FA592_07280 PF02796 Helix-turn-helix domain of resolvase FA592_07280 PF00665 Integrase core domain FA592_07290 PF01695 IstB-like ATP binding protein FA592_07305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA592_07305 PF08447 PAS fold FA592_07305 PF13426 PAS domain FA592_07315 PF02080 TrkA-C domain FA592_07315 PF06826 Predicted Permease Membrane Region FA592_07325 PF00857 Isochorismatase family FA592_07330 PF00440 Bacterial regulatory proteins, tetR family FA592_07330 PF16925 Tetracyclin repressor-like, C-terminal domain FA592_07345 PF12833 Helix-turn-helix domain FA592_07345 PF06445 GyrI-like small molecule binding domain FA592_07350 PF08241 Methyltransferase domain FA592_07355 PF01875 Memo-like protein FA592_07365 PF01871 AMMECR1 FA592_07390 PF12833 Helix-turn-helix domain FA592_07400 PF05728 Uncharacterised protein family (UPF0227) FA592_07410 PF12838 4Fe-4S dicluster domain FA592_07410 PF01568 Molydopterin dinucleotide binding domain FA592_07410 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FA592_07410 PF00384 Molybdopterin oxidoreductase FA592_07410 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FA592_07440 PF00920 Dehydratase family FA592_07445 PF01914 MarC family integral membrane protein FA592_07455 PF00483 Nucleotidyl transferase FA592_07460 PF06418 CTP synthase N-terminus FA592_07460 PF00117 Glutamine amidotransferase class-I FA592_07465 PF17768 RecJ OB domain FA592_07465 PF01368 DHH family FA592_07465 PF02272 DHHA1 domain FA592_07475 PF00795 Carbon-nitrogen hydrolase FA592_07480 PF00268 Ribonucleotide reductase, small chain FA592_07495 PF13597 Anaerobic ribonucleoside-triphosphate reductase FA592_07495 PF03477 ATP cone domain FA592_07500 PF01177 Asp/Glu/Hydantoin racemase FA592_07505 PF03477 ATP cone domain FA592_07505 PF00317 Ribonucleotide reductase, all-alpha domain FA592_07505 PF02867 Ribonucleotide reductase, barrel domain FA592_07510 PF00206 Lyase FA592_07510 PF10397 Adenylosuccinate lyase C-terminus FA592_07515 PF00849 RNA pseudouridylate synthase FA592_07520 PF01557 Fumarylacetoacetate (FAA) hydrolase family FA592_07525 PF04055 Radical SAM superfamily FA592_07535 PF00977 Histidine biosynthesis protein FA592_07540 PF00398 Ribosomal RNA adenine dimethylase FA592_07545 PF17770 Ribonuclease J C-terminal domain FA592_07545 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain FA592_07545 PF00753 Metallo-beta-lactamase superfamily FA592_07550 PF01380 SIS domain FA592_07550 PF00571 CBS domain FA592_07555 PF00849 RNA pseudouridylate synthase FA592_07555 PF01479 S4 domain FA592_07580 PF01312 FlhB HrpN YscU SpaS Family FA592_07595 PF00586 AIR synthase related protein, N-terminal domain FA592_07595 PF02769 AIR synthase related protein, C-terminal domain FA592_07600 PF01121 Dephospho-CoA kinase FA592_07605 PF01678 Diaminopimelate epimerase FA592_07615 PF03462 PCRF domain FA592_07615 PF00472 RF-1 domain FA592_07620 PF01649 Ribosomal protein S20 FA592_07625 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FA592_07625 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FA592_07625 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FA592_07625 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FA592_07630 PF01252 Signal peptidase (SPase) II FA592_07640 PF03129 Anticodon binding domain FA592_07640 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FA592_07640 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FA592_07645 PF00707 Translation initiation factor IF-3, C-terminal domain FA592_07645 PF05198 Translation initiation factor IF-3, N-terminal domain FA592_07650 PF01632 Ribosomal protein L35 FA592_07655 PF00453 Ribosomal protein L20 FA592_07660 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase FA592_07660 PF13746 4Fe-4S dicluster domain FA592_07660 PF12801 4Fe-4S binding domain FA592_07670 PF01165 Ribosomal protein S21 FA592_07685 PF03738 Glutathionylspermidine synthase preATP-grasp FA592_07690 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FA592_07690 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FA592_07695 PF04461 Protein of unknown function (DUF520) FA592_07705 PF08019 Phosphoethanolamine transferase EptA/EptB FA592_07705 PF00884 Sulfatase FA592_07710 PF02796 Helix-turn-helix domain of resolvase FA592_07710 PF00665 Integrase core domain FA592_07720 PF08019 Phosphoethanolamine transferase EptA/EptB FA592_07720 PF00884 Sulfatase FA592_07750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA592_07755 PF00072 Response regulator receiver domain FA592_07755 PF00486 Transcriptional regulatory protein, C terminal FA592_07775 PF00005 ABC transporter FA592_07780 PF02405 Permease MlaE FA592_07785 PF01625 Peptide methionine sulfoxide reductase FA592_07795 PF01914 MarC family integral membrane protein FA592_07800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA592_07800 PF00672 HAMP domain FA592_07800 PF17200 Single Cache domain 2 FA592_07810 PF11849 Domain of unknown function (DUF3369) FA592_07830 PF00989 PAS fold FA592_07830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA592_07830 PF00512 His Kinase A (phospho-acceptor) domain FA592_07830 PF13426 PAS domain FA592_07830 PF13188 PAS domain FA592_07835 PF00072 Response regulator receiver domain FA592_07835 PF00486 Transcriptional regulatory protein, C terminal FA592_07840 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FA592_07845 PF00543 Nitrogen regulatory protein P-II FA592_07850 PF00909 Ammonium Transporter Family FA592_07855 PF00248 Aldo/keto reductase family FA592_07865 PF00072 Response regulator receiver domain FA592_07865 PF00486 Transcriptional regulatory protein, C terminal FA592_07880 PF00528 Binding-protein-dependent transport system inner membrane component FA592_07885 PF00497 Bacterial extracellular solute-binding proteins, family 3 FA592_07890 PF00005 ABC transporter FA592_07920 PF01261 Xylose isomerase-like TIM barrel FA592_07930 PF13193 AMP-binding enzyme C-terminal domain FA592_07930 PF00501 AMP-binding enzyme FA592_07935 PF06480 FtsH Extracellular FA592_07935 PF17862 AAA+ lid domain FA592_07935 PF01434 Peptidase family M41 FA592_07935 PF00004 ATPase family associated with various cellular activities (AAA) FA592_07940 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 FA592_07945 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FA592_07950 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FA592_07955 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FA592_07970 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FA592_07970 PF00384 Molybdopterin oxidoreductase FA592_07970 PF13237 4Fe-4S dicluster domain FA592_07970 PF01568 Molydopterin dinucleotide binding domain FA592_07970 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FA592_07975 PF00146 NADH dehydrogenase FA592_07980 PF12838 4Fe-4S dicluster domain FA592_07985 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 FA592_07990 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FA592_07995 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FA592_07995 PF00361 Proton-conducting membrane transporter FA592_08000 PF00361 Proton-conducting membrane transporter FA592_08000 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus FA592_08015 PF00171 Aldehyde dehydrogenase family FA592_08025 PF01040 UbiA prenyltransferase family FA592_08040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA592_08040 PF16591 Helical bimodular sensor domain FA592_08040 PF00672 HAMP domain FA592_08045 PF08447 PAS fold FA592_08045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA592_08065 PF04452 RNA methyltransferase FA592_08070 PF01197 Ribosomal protein L31 FA592_08075 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FA592_08080 PF00588 SpoU rRNA Methylase family FA592_08080 PF08032 RNA 2'-O ribose methyltransferase substrate binding FA592_08095 PF00155 Aminotransferase class I and II FA592_08100 PF01842 ACT domain FA592_08100 PF03447 Homoserine dehydrogenase, NAD binding domain FA592_08100 PF00742 Homoserine dehydrogenase FA592_08105 PF02021 Uncharacterised protein family UPF0102 FA592_08110 PF00085 Thioredoxin FA592_08115 PF07992 Pyridine nucleotide-disulphide oxidoreductase FA592_08120 PF05173 Dihydrodipicolinate reductase, C-terminus FA592_08120 PF01113 Dihydrodipicolinate reductase, N-terminus FA592_08125 PF00156 Phosphoribosyl transferase domain FA592_08130 PF16199 Radical_SAM C-terminal domain FA592_08130 PF04055 Radical SAM superfamily FA592_08145 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase FA592_08145 PF01502 Phosphoribosyl-AMP cyclohydrolase FA592_08155 PF01063 Amino-transferase class IV FA592_08160 PF00171 Aldehyde dehydrogenase family FA592_08165 PF00578 AhpC/TSA family FA592_08170 PF00072 Response regulator receiver domain FA592_08170 PF00486 Transcriptional regulatory protein, C terminal FA592_08180 PF02677 Epoxyqueuosine reductase QueH FA592_08185 PF07977 FabA-like domain FA592_08190 PF00132 Bacterial transferase hexapeptide (six repeats) FA592_08190 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 FA592_08195 PF06689 ClpX C4-type zinc finger FA592_08195 PF07724 AAA domain (Cdc48 subfamily) FA592_08195 PF10431 C-terminal, D2-small domain, of ClpB protein FA592_08210 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FA592_08210 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FA592_08210 PF02142 MGS-like domain FA592_08230 PF00899 ThiF family FA592_08235 PF01975 Survival protein SurE FA592_08240 PF02684 Lipid-A-disaccharide synthetase FA592_08245 PF01272 Transcription elongation factor, GreA/GreB, C-term FA592_08245 PF03449 Transcription elongation factor, N-terminal FA592_08250 PF02774 Semialdehyde dehydrogenase, dimerisation domain FA592_08250 PF01118 Semialdehyde dehydrogenase, NAD binding domain FA592_08260 PF01584 CheW-like domain FA592_08260 PF00072 Response regulator receiver domain FA592_08265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA592_08265 PF01584 CheW-like domain FA592_08265 PF01627 Hpt domain FA592_08265 PF00072 Response regulator receiver domain FA592_08265 PF02895 Signal transducing histidine kinase, homodimeric domain FA592_08270 PF01584 CheW-like domain FA592_08290 PF00923 Transaldolase/Fructose-6-phosphate aldolase FA592_08295 PF00437 Type II/IV secretion system protein FA592_08300 PF14693 Ribosomal protein TL5, C-terminal domain FA592_08300 PF01386 Ribosomal L25p family FA592_08305 PF01195 Peptidyl-tRNA hydrolase FA592_08315 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FA592_08315 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FA592_08320 PF00800 Prephenate dehydratase FA592_08320 PF01817 Chorismate mutase type II FA592_08320 PF01842 ACT domain FA592_08325 PF00155 Aminotransferase class I and II FA592_08330 PF01514 Secretory protein of YscJ/FliF family FA592_08330 PF08345 Flagellar M-ring protein C-terminal FA592_08335 PF14842 FliG N-terminal domain FA592_08335 PF01706 FliG C-terminal domain FA592_08335 PF14841 FliG middle domain FA592_08345 PF02779 Transketolase, pyrimidine binding domain FA592_08345 PF02780 Transketolase, C-terminal domain FA592_08345 PF13292 1-deoxy-D-xylulose-5-phosphate synthase FA592_08350 PF01475 Ferric uptake regulator family FA592_08355 PF00578 AhpC/TSA family FA592_08355 PF10417 C-terminal domain of 1-Cys peroxiredoxin FA592_08360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA592_08360 PF00672 HAMP domain FA592_08360 PF16591 Helical bimodular sensor domain FA592_08365 PF00037 4Fe-4S binding domain FA592_08370 PF00334 Nucleoside diphosphate kinase FA592_08380 PF01783 Ribosomal L32p protein family FA592_08385 PF02504 Fatty acid synthesis protein FA592_08390 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FA592_08390 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FA592_08395 PF17863 AAA lid domain FA592_08395 PF07726 ATPase family associated with various cellular activities (AAA) FA592_08415 PF07584 Aerotolerance regulator N-terminal FA592_08415 PF00092 von Willebrand factor type A domain FA592_08430 PF02153 Prephenate dehydrogenase FA592_08430 PF01842 ACT domain FA592_08435 PF01103 Surface antigen FA592_08435 PF07244 Surface antigen variable number repeat FA592_08445 PF00037 4Fe-4S binding domain FA592_08450 PF00512 His Kinase A (phospho-acceptor) domain FA592_08450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA592_08455 PF00072 Response regulator receiver domain FA592_08455 PF00486 Transcriptional regulatory protein, C terminal FA592_08465 PF02660 Glycerol-3-phosphate acyltransferase FA592_08470 PF02445 Quinolinate synthetase A protein FA592_08475 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain FA592_08475 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain FA592_08480 PF01312 FlhB HrpN YscU SpaS Family FA592_08495 PF03775 Septum formation inhibitor MinC, C-terminal domain FA592_08500 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase FA592_08520 PF11987 Translation-initiation factor 2 FA592_08520 PF00009 Elongation factor Tu GTP binding domain FA592_08520 PF04760 Translation initiation factor IF-2, N-terminal region FA592_08525 PF02033 Ribosome-binding factor A FA592_08530 PF02576 RimP N-terminal domain FA592_08530 PF17384 RimP C-terminal SH3 domain FA592_08535 PF01872 RibD C-terminal domain FA592_08535 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FA592_08550 PF00563 EAL domain FA592_08550 PF08447 PAS fold FA592_08550 PF00990 Diguanylate cyclase, GGDEF domain FA592_08550 PF08448 PAS fold FA592_08555 PF00313 'Cold-shock' DNA-binding domain FA592_08560 PF00512 His Kinase A (phospho-acceptor) domain FA592_08560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA592_08560 PF13426 PAS domain FA592_08560 PF00672 HAMP domain FA592_08565 PF13613 Helix-turn-helix of DDE superfamily endonuclease FA592_08565 PF13359 DDE superfamily endonuclease FA592_08570 PF13613 Helix-turn-helix of DDE superfamily endonuclease FA592_08570 PF13359 DDE superfamily endonuclease FA592_08580 PF00072 Response regulator receiver domain FA592_08580 PF00486 Transcriptional regulatory protein, C terminal FA592_08590 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FA592_08600 PF16199 Radical_SAM C-terminal domain FA592_08600 PF04055 Radical SAM superfamily FA592_08605 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FA592_08605 PF10518 TAT (twin-arginine translocation) pathway signal sequence FA592_08605 PF01568 Molydopterin dinucleotide binding domain FA592_08605 PF00384 Molybdopterin oxidoreductase FA592_08610 PF13247 4Fe-4S dicluster domain FA592_08615 PF03916 Polysulphide reductase, NrfD FA592_08620 PF08495 FIST N domain FA592_08620 PF00563 EAL domain FA592_08620 PF00990 Diguanylate cyclase, GGDEF domain FA592_08620 PF10442 FIST C domain FA592_08625 PF00384 Molybdopterin oxidoreductase FA592_08625 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FA592_08625 PF01568 Molydopterin dinucleotide binding domain FA592_08630 PF13247 4Fe-4S dicluster domain FA592_08635 PF03916 Polysulphide reductase, NrfD FA592_08640 PF00486 Transcriptional regulatory protein, C terminal FA592_08640 PF00072 Response regulator receiver domain FA592_08655 PF04055 Radical SAM superfamily FA592_08655 PF06969 HemN C-terminal domain FA592_08680 PF02472 Biopolymer transport protein ExbD/TolR FA592_08685 PF01618 MotA/TolQ/ExbB proton channel family FA592_08690 PF02833 DHHA2 domain FA592_08690 PF01368 DHH family FA592_08705 PF01209 ubiE/COQ5 methyltransferase family FA592_08710 PF02601 Exonuclease VII, large subunit FA592_08710 PF13742 OB-fold nucleic acid binding domain FA592_08725 PF00497 Bacterial extracellular solute-binding proteins, family 3 FA592_08725 PF01464 Transglycosylase SLT domain FA592_08730 PF00665 Integrase core domain FA592_08730 PF02796 Helix-turn-helix domain of resolvase FA592_08740 PF00990 Diguanylate cyclase, GGDEF domain FA592_08740 PF00563 EAL domain FA592_08740 PF03707 Bacterial signalling protein N terminal repeat FA592_08745 PF00962 Adenosine/AMP deaminase FA592_08755 PF06719 AraC-type transcriptional regulator N-terminus FA592_08755 PF12833 Helix-turn-helix domain FA592_08760 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FA592_08765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FA592_08765 PF03466 LysR substrate binding domain FA592_08770 PF03601 Conserved hypothetical protein 698 FA592_08775 PF00255 Glutathione peroxidase FA592_08780 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 FA592_08780 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) FA592_08785 PF01343 Peptidase family S49 FA592_08790 PF01979 Amidohydrolase family FA592_08795 PF01220 Dehydroquinase class II FA592_08800 PF00557 Metallopeptidase family M24 FA592_08800 PF01321 Creatinase/Prolidase N-terminal domain FA592_08805 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FA592_08810 PF00448 SRP54-type protein, GTPase domain FA592_08815 PF10609 NUBPL iron-transfer P-loop NTPase FA592_08825 PF04545 Sigma-70, region 4 FA592_08825 PF04539 Sigma-70 region 3 FA592_08825 PF04542 Sigma-70 region 2 FA592_08830 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FA592_08830 PF02154 Flagellar motor switch protein FliM FA592_08835 PF04509 CheC-like family FA592_08835 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FA592_08850 PF00535 Glycosyl transferase family 2 FA592_08855 PF08889 WbqC-like protein family FA592_08860 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FA592_08880 PF14572 Phosphoribosyl synthetase-associated domain FA592_08880 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FA592_08885 PF06421 GTP-binding protein LepA C-terminus FA592_08885 PF03144 Elongation factor Tu domain 2 FA592_08885 PF00009 Elongation factor Tu GTP binding domain FA592_08885 PF00679 Elongation factor G C-terminus FA592_08890 PF00156 Phosphoribosyl transferase domain FA592_08895 PF00083 Sugar (and other) transporter FA592_08910 PF03989 DNA gyrase C-terminal domain, beta-propeller FA592_08910 PF00521 DNA gyrase/topoisomerase IV, subunit A FA592_08925 PF00072 Response regulator receiver domain FA592_08925 PF00158 Sigma-54 interaction domain FA592_08930 PF02774 Semialdehyde dehydrogenase, dimerisation domain FA592_08930 PF01118 Semialdehyde dehydrogenase, NAD binding domain FA592_08940 PF01208 Uroporphyrinogen decarboxylase (URO-D) FA592_08945 PF04055 Radical SAM superfamily FA592_08955 PF16868 NMT1-like family FA592_08965 PF13356 Arm DNA-binding domain FA592_08965 PF00589 Phage integrase family FA592_08985 PF02796 Helix-turn-helix domain of resolvase FA592_08985 PF00665 Integrase core domain FA592_08995 PF02796 Helix-turn-helix domain of resolvase FA592_08995 PF00239 Resolvase, N terminal domain FA592_09020 PF03180 NLPA lipoprotein FA592_09025 PF00005 ABC transporter FA592_09025 PF09383 NIL domain FA592_09030 PF00528 Binding-protein-dependent transport system inner membrane component FA592_09035 PF01384 Phosphate transporter family FA592_09040 PF00056 lactate/malate dehydrogenase, NAD binding domain FA592_09040 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FA592_09045 PF09364 XFP N-terminal domain FA592_09045 PF09363 XFP C-terminal domain FA592_09045 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase FA592_09090 PF10442 FIST C domain FA592_09090 PF08495 FIST N domain FA592_09090 PF00990 Diguanylate cyclase, GGDEF domain FA592_09090 PF00563 EAL domain FA592_09110 PF00085 Thioredoxin FA592_09120 PF07286 Protein of unknown function (DUF1445) FA592_09145 PF09905 DNA-binding protein VF530 FA592_09150 PF00106 short chain dehydrogenase FA592_09160 PF02653 Branched-chain amino acid transport system / permease component FA592_09165 PF11862 Domain of unknown function (DUF3382) FA592_09165 PF02653 Branched-chain amino acid transport system / permease component FA592_09170 PF12399 Branched-chain amino acid ATP-binding cassette transporter FA592_09170 PF00005 ABC transporter FA592_09175 PF00005 ABC transporter FA592_09185 PF03883 Peroxide stress protein YaaA FA592_09210 PF03143 Elongation factor Tu C-terminal domain FA592_09210 PF00009 Elongation factor Tu GTP binding domain FA592_09210 PF03144 Elongation factor Tu domain 2 FA592_09215 PF00471 Ribosomal protein L33 FA592_09230 PF02357 Transcription termination factor nusG FA592_09235 PF00298 Ribosomal protein L11, RNA binding domain FA592_09235 PF03946 Ribosomal protein L11, N-terminal domain FA592_09240 PF00687 Ribosomal protein L1p/L10e family FA592_09245 PF00466 Ribosomal protein L10 FA592_09250 PF16320 Ribosomal protein L7/L12 dimerisation domain FA592_09250 PF00542 Ribosomal protein L7/L12 C-terminal domain FA592_09255 PF04565 RNA polymerase Rpb2, domain 3 FA592_09255 PF00562 RNA polymerase Rpb2, domain 6 FA592_09255 PF04560 RNA polymerase Rpb2, domain 7 FA592_09255 PF10385 RNA polymerase beta subunit external 1 domain FA592_09255 PF04563 RNA polymerase beta subunit FA592_09255 PF04561 RNA polymerase Rpb2, domain 2 FA592_09260 PF04997 RNA polymerase Rpb1, domain 1 FA592_09260 PF00623 RNA polymerase Rpb1, domain 2 FA592_09260 PF04983 RNA polymerase Rpb1, domain 3 FA592_09260 PF05000 RNA polymerase Rpb1, domain 4 FA592_09260 PF04998 RNA polymerase Rpb1, domain 5 FA592_09265 PF00164 Ribosomal protein S12/S23 FA592_09270 PF00177 Ribosomal protein S7p/S5e FA592_09275 PF14492 Elongation Factor G, domain II FA592_09275 PF03764 Elongation factor G, domain IV FA592_09275 PF00009 Elongation factor Tu GTP binding domain FA592_09275 PF00679 Elongation factor G C-terminus FA592_09275 PF03144 Elongation factor Tu domain 2 FA592_09285 PF00892 EamA-like transporter family FA592_09290 PF00248 Aldo/keto reductase family FA592_09300 PF00939 Sodium:sulfate symporter transmembrane region FA592_09305 PF01554 MatE FA592_09320 PF00486 Transcriptional regulatory protein, C terminal FA592_09320 PF00072 Response regulator receiver domain FA592_09325 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FA592_09330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA592_09330 PF08447 PAS fold FA592_09330 PF08448 PAS fold FA592_09335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA592_09335 PF16591 Helical bimodular sensor domain FA592_09335 PF00672 HAMP domain FA592_09340 PF08447 PAS fold FA592_09340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA592_09350 PF00384 Molybdopterin oxidoreductase FA592_09350 PF01568 Molydopterin dinucleotide binding domain FA592_09350 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FA592_09350 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FA592_09355 PF00146 NADH dehydrogenase FA592_09360 PF12838 4Fe-4S dicluster domain FA592_09365 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 FA592_09370 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FA592_09375 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FA592_09375 PF00361 Proton-conducting membrane transporter FA592_09380 PF00361 Proton-conducting membrane transporter FA592_09385 PF00361 Proton-conducting membrane transporter FA592_09390 PF00563 EAL domain FA592_09390 PF00990 Diguanylate cyclase, GGDEF domain FA592_09390 PF03707 Bacterial signalling protein N terminal repeat FA592_09405 PF10531 SLBB domain FA592_09405 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FA592_09405 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FA592_09415 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FA592_09415 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FA592_09420 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FA592_09425 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 FA592_09440 PF00842 Alanine racemase, C-terminal domain FA592_09440 PF01168 Alanine racemase, N-terminal domain FA592_09460 PF02527 rRNA small subunit methyltransferase G FA592_09465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA592_09465 PF00672 HAMP domain FA592_09465 PF12729 Four helix bundle sensory module for signal transduction FA592_09475 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FA592_09475 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FA592_09480 PF01741 Large-conductance mechanosensitive channel, MscL FA592_09490 PF00925 GTP cyclohydrolase II FA592_09495 PF00490 Delta-aminolevulinic acid dehydratase FA592_09500 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FA592_09500 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FA592_09505 PF10788 Protein of unknown function (DUF2603) FA592_09510 PF06969 HemN C-terminal domain FA592_09510 PF04055 Radical SAM superfamily FA592_09515 PF02754 Cysteine-rich domain FA592_09520 PF00990 Diguanylate cyclase, GGDEF domain FA592_09520 PF00072 Response regulator receiver domain FA592_09525 PF07690 Major Facilitator Superfamily FA592_09530 PF02810 SEC-C motif FA592_09545 PF08448 PAS fold FA592_09545 PF00990 Diguanylate cyclase, GGDEF domain FA592_09550 PF01790 Prolipoprotein diacylglyceryl transferase FA592_09555 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FA592_09560 PF00890 FAD binding domain FA592_09560 PF02910 Fumarate reductase flavoprotein C-term FA592_09565 PF13085 2Fe-2S iron-sulfur cluster binding domain FA592_09565 PF13183 4Fe-4S dicluster domain FA592_09570 PF00350 Dynamin family FA592_09575 PF00350 Dynamin family FA592_09580 PF01594 AI-2E family transporter FA592_09585 PF05496 Holliday junction DNA helicase RuvB P-loop domain FA592_09585 PF17864 RuvB AAA lid domain FA592_09585 PF05491 RuvB C-terminal winged helix domain FA592_09590 PF02548 Ketopantoate hydroxymethyltransferase FA592_09600 PF00290 Tryptophan synthase alpha chain FA592_09615 PF00318 Ribosomal protein S2 FA592_09620 PF00889 Elongation factor TS FA592_09625 PF00005 ABC transporter FA592_09630 PF01311 Bacterial export proteins, family 1 FA592_09640 PF00625 Guanylate kinase FA592_09645 PF02416 mttA/Hcf106 family FA592_09650 PF03485 Arginyl tRNA synthetase N terminal domain FA592_09650 PF05746 DALR anticodon binding domain FA592_09650 PF00750 tRNA synthetases class I (R) FA592_09660 PF00990 Diguanylate cyclase, GGDEF domain FA592_09660 PF10442 FIST C domain FA592_09660 PF00563 EAL domain FA592_09660 PF08495 FIST N domain FA592_09685 PF02796 Helix-turn-helix domain of resolvase FA592_09685 PF00665 Integrase core domain FA592_09710 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FA592_09710 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FA592_09715 PF00162 Phosphoglycerate kinase FA592_09720 PF00121 Triosephosphate isomerase FA592_09730 PF00528 Binding-protein-dependent transport system inner membrane component FA592_09735 PF08529 NusA N-terminal domain FA592_09735 PF13184 NusA-like KH domain FA592_09745 PF01938 TRAM domain FA592_09745 PF04055 Radical SAM superfamily FA592_09745 PF00919 Uncharacterized protein family UPF0004 FA592_09770 PF01171 PP-loop family FA592_09775 PF04055 Radical SAM superfamily FA592_09775 PF00919 Uncharacterized protein family UPF0004 FA592_09780 PF02569 Pantoate-beta-alanine ligase FA592_09785 PF00472 RF-1 domain FA592_09785 PF03462 PCRF domain FA592_09810 PF12169 DNA polymerase III subunits gamma and tau domain III FA592_09810 PF12170 DNA polymerase III tau subunit V interacting with alpha FA592_09815 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FA592_09815 PF07497 Rho termination factor, RNA-binding domain FA592_09815 PF07498 Rho termination factor, N-terminal domain FA592_09820 PF01255 Putative undecaprenyl diphosphate synthase FA592_09830 PF02796 Helix-turn-helix domain of resolvase FA592_09830 PF00665 Integrase core domain FA592_09835 PF01695 IstB-like ATP binding protein FA592_09845 PF08378 Nuclease-related domain FA592_09850 PF03976 Polyphosphate kinase 2 (PPK2) FA592_09865 PF00355 Rieske [2Fe-2S] domain FA592_09865 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal FA592_09870 PF00033 Cytochrome b/b6/petB FA592_09870 PF00032 Cytochrome b(C-terminal)/b6/petD FA592_09885 PF00270 DEAD/DEAH box helicase FA592_09885 PF00271 Helicase conserved C-terminal domain FA592_09890 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding FA592_09890 PF18381 YcaO cyclodehydratase C-terminal domain FA592_09905 PF08448 PAS fold FA592_09905 PF08447 PAS fold FA592_09905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA592_09910 PF00072 Response regulator receiver domain FA592_09915 PF03480 Bacterial extracellular solute-binding protein, family 7 FA592_09935 PF02653 Branched-chain amino acid transport system / permease component FA592_09945 PF12399 Branched-chain amino acid ATP-binding cassette transporter FA592_09945 PF00005 ABC transporter FA592_09950 PF00005 ABC transporter FA592_09955 PF01578 Cytochrome C assembly protein FA592_09955 PF05140 ResB-like family FA592_09995 PF18146 Damage-inducible protein CinA KH domain FA592_09995 PF02464 Competence-damaged protein FA592_09995 PF00994 Probable molybdopterin binding domain FA592_10000 PF08264 Anticodon-binding domain of tRNA FA592_10000 PF00133 tRNA synthetases class I (I, L, M and V) FA592_10005 PF01425 Amidase FA592_10010 PF00571 CBS domain FA592_10010 PF00478 IMP dehydrogenase / GMP reductase domain FA592_10015 PF00561 alpha/beta hydrolase fold FA592_10020 PF02609 Exonuclease VII small subunit FA592_10030 PF00899 ThiF family FA592_10035 PF00155 Aminotransferase class I and II FA592_10050 PF00488 MutS domain V FA592_10050 PF01713 Smr domain FA592_10055 PF01546 Peptidase family M20/M25/M40 FA592_10055 PF07687 Peptidase dimerisation domain FA592_10060 PF01042 Endoribonuclease L-PSP FA592_10065 PF06039 Malate:quinone oxidoreductase (Mqo) FA592_10085 PF01471 Putative peptidoglycan binding domain FA592_10085 PF03572 Peptidase family S41 FA592_10085 PF17820 PDZ domain FA592_10100 PF02887 Pyruvate kinase, alpha/beta domain FA592_10100 PF00224 Pyruvate kinase, barrel domain FA592_10100 PF00391 PEP-utilising enzyme, mobile domain FA592_10105 PF00829 Ribosomal prokaryotic L21 protein FA592_10110 PF01016 Ribosomal L27 protein FA592_10115 PF01926 50S ribosome-binding GTPase FA592_10115 PF01018 GTP1/OBG FA592_10120 PF00696 Amino acid kinase family FA592_10125 PF02911 Formyl transferase, C-terminal domain FA592_10125 PF00551 Formyl transferase FA592_10135 PF13614 AAA domain FA592_10140 PF02195 ParB-like nuclease domain FA592_10140 PF17762 HTH domain found in ParB protein FA592_10150 PF00430 ATP synthase B/B' CF(0) FA592_10155 PF00213 ATP synthase delta (OSCP) subunit FA592_10160 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FA592_10160 PF00306 ATP synthase alpha/beta chain, C terminal domain FA592_10160 PF02874 ATP synthase alpha/beta family, beta-barrel domain FA592_10165 PF00231 ATP synthase FA592_10170 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FA592_10170 PF02874 ATP synthase alpha/beta family, beta-barrel domain FA592_10175 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain FA592_10180 PF01618 MotA/TolQ/ExbB proton channel family FA592_10185 PF02472 Biopolymer transport protein ExbD/TolR FA592_10195 PF04052 TolB amino-terminal domain FA592_10200 PF00691 OmpA family FA592_10200 PF01389 OmpA-like transmembrane domain FA592_10210 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FA592_10220 PF00698 Acyl transferase domain FA592_10225 PF01048 Phosphorylase superfamily FA592_10230 PF01171 PP-loop family FA592_10240 PF04898 Glutamate synthase central domain FA592_10240 PF00310 Glutamine amidotransferases class-II FA592_10240 PF01493 GXGXG motif FA592_10240 PF01645 Conserved region in glutamate synthase FA592_10245 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FA592_10245 PF07992 Pyridine nucleotide-disulphide oxidoreductase FA592_10255 PF17848 Acetyl-coA carboxylase zinc finger domain FA592_10255 PF01039 Carboxyl transferase domain FA592_10260 PF02590 Predicted SPOUT methyltransferase FA592_10265 PF01258 Prokaryotic dksA/traR C4-type zinc finger FA592_10275 PF01207 Dihydrouridine synthase (Dus) FA592_10295 PF04509 CheC-like family FA592_10295 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FA592_10305 PF02954 Bacterial regulatory protein, Fis family FA592_10305 PF00158 Sigma-54 interaction domain FA592_10325 PF03960 ArsC family FA592_10345 PF01243 Pyridoxamine 5'-phosphate oxidase FA592_10350 PF00440 Bacterial regulatory proteins, tetR family FA592_10350 PF16925 Tetracyclin repressor-like, C-terminal domain FA592_10355 PF00109 Beta-ketoacyl synthase, N-terminal domain FA592_10355 PF02801 Beta-ketoacyl synthase, C-terminal domain FA592_10360 PF08331 Domain of unknown function (DUF1730) FA592_10370 PF01047 MarR family FA592_10385 PF01964 Radical SAM ThiC family FA592_10385 PF13667 ThiC-associated domain FA592_10395 PF00324 Amino acid permease FA592_10400 PF01925 Sulfite exporter TauE/SafE FA592_10405 PF00005 ABC transporter FA592_10405 PF17755 UvrA DNA-binding domain FA592_10405 PF17760 UvrA interaction domain FA592_10410 PF00375 Sodium:dicarboxylate symporter family FA592_10415 PF00375 Sodium:dicarboxylate symporter family FA592_10425 PF01367 5'-3' exonuclease, C-terminal SAM fold FA592_10425 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FA592_10425 PF00476 DNA polymerase family A FA592_10430 PF02659 Putative manganese efflux pump FA592_10450 PF00684 DnaJ central domain FA592_10450 PF01556 DnaJ C terminal domain FA592_10450 PF00226 DnaJ domain FA592_10460 PF00072 Response regulator receiver domain FA592_10460 PF00486 Transcriptional regulatory protein, C terminal FA592_10470 PF02132 RecR protein FA592_10470 PF13662 Toprim domain FA592_10475 PF00563 EAL domain FA592_10475 PF00990 Diguanylate cyclase, GGDEF domain FA592_10475 PF03707 Bacterial signalling protein N terminal repeat FA592_10480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA592_10480 PF00672 HAMP domain FA592_10485 PF13193 AMP-binding enzyme C-terminal domain FA592_10485 PF00501 AMP-binding enzyme FA592_10490 PF08501 Shikimate dehydrogenase substrate binding domain FA592_10495 PF00425 chorismate binding enzyme FA592_10495 PF04715 Anthranilate synthase component I, N terminal region FA592_10510 PF00464 Serine hydroxymethyltransferase FA592_10515 PF01336 OB-fold nucleic acid binding domain FA592_10515 PF00152 tRNA synthetases class II (D, K and N) FA592_10520 PF01475 Ferric uptake regulator family FA592_10530 PF00990 Diguanylate cyclase, GGDEF domain FA592_10535 PF00437 Type II/IV secretion system protein FA592_10540 PF02686 Glu-tRNAGln amidotransferase C subunit FA592_10560 PF03309 Type III pantothenate kinase FA592_10565 PF01634 ATP phosphoribosyltransferase FA592_10570 PF00072 Response regulator receiver domain FA592_10575 PF01627 Hpt domain FA592_10575 PF00512 His Kinase A (phospho-acceptor) domain FA592_10575 PF00672 HAMP domain FA592_10575 PF00072 Response regulator receiver domain FA592_10575 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FA592_10575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA592_10590 PF08459 UvrC Helix-hairpin-helix N-terminal FA592_10590 PF01541 GIY-YIG catalytic domain FA592_10590 PF02151 UvrB/uvrC motif FA592_10600 PF00890 FAD binding domain FA592_10605 PF03600 Citrate transporter FA592_10610 PF02540 NAD synthase FA592_10610 PF00958 GMP synthase C terminal domain FA592_10610 PF00117 Glutamine amidotransferase class-I FA592_10620 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain FA592_10620 PF02843 Phosphoribosylglycinamide synthetase, C domain FA592_10620 PF02844 Phosphoribosylglycinamide synthetase, N domain FA592_10630 PF03968 OstA-like protein FA592_10630 PF04453 LPS transport system D FA592_10635 PF03725 3' exoribonuclease family, domain 2 FA592_10635 PF01138 3' exoribonuclease family, domain 1 FA592_10635 PF00013 KH domain FA592_10635 PF00575 S1 RNA binding domain FA592_10635 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain FA592_10640 PF00137 ATP synthase subunit C FA592_10660 PF00364 Biotin-requiring enzyme FA592_10665 PF01293 Phosphoenolpyruvate carboxykinase FA592_10670 PF14698 Argininosuccinate lyase C-terminal FA592_10670 PF00206 Lyase FA592_10675 PF01230 HIT domain FA592_10680 PF01409 tRNA synthetases class II core domain (F) FA592_10680 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain FA592_10685 PF03484 tRNA synthetase B5 domain FA592_10685 PF01588 Putative tRNA binding domain FA592_10685 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain FA592_10685 PF03147 Ferredoxin-fold anticodon binding domain FA592_10690 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FA592_10695 PF02401 LytB protein FA592_10700 PF00575 S1 RNA binding domain FA592_10710 PF01842 ACT domain FA592_10710 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FA592_10710 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FA592_10720 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FA592_10725 PF00873 AcrB/AcrD/AcrF family FA592_10730 PF00873 AcrB/AcrD/AcrF family FA592_10740 PF09285 Elongation factor P, C-terminal FA592_10740 PF01132 Elongation factor P (EF-P) OB domain FA592_10740 PF08207 Elongation factor P (EF-P) KOW-like domain FA592_10745 PF00672 HAMP domain FA592_10745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA592_10755 PF12729 Four helix bundle sensory module for signal transduction FA592_10755 PF00672 HAMP domain FA592_10755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA592_10760 PF00672 HAMP domain FA592_10760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA592_10760 PF12729 Four helix bundle sensory module for signal transduction FA592_10765 PF00488 MutS domain V FA592_10765 PF05192 MutS domain III FA592_10765 PF05188 MutS domain II FA592_10765 PF05190 MutS family domain IV FA592_10765 PF01624 MutS domain I FA592_10775 PF17783 CvfB-like winged helix domain FA592_10775 PF13509 S1 domain FA592_10785 PF03707 Bacterial signalling protein N terminal repeat FA592_10785 PF00563 EAL domain FA592_10785 PF00990 Diguanylate cyclase, GGDEF domain FA592_10805 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FA592_10810 PF02321 Outer membrane efflux protein FA592_10815 PF00873 AcrB/AcrD/AcrF family FA592_10820 PF13359 DDE superfamily endonuclease FA592_10820 PF13613 Helix-turn-helix of DDE superfamily endonuclease FA592_10825 PF13359 DDE superfamily endonuclease FA592_10825 PF13613 Helix-turn-helix of DDE superfamily endonuclease FA592_10830 PF00873 AcrB/AcrD/AcrF family FA592_10835 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FA592_10840 PF08447 PAS fold FA592_10840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA592_10845 PF00672 HAMP domain FA592_10845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA592_10845 PF17200 Single Cache domain 2 FA592_10855 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FA592_10855 PF14579 Helix-hairpin-helix motif FA592_10855 PF07733 Bacterial DNA polymerase III alpha NTPase domain FA592_10855 PF02811 PHP domain FA592_10860 PF00512 His Kinase A (phospho-acceptor) domain FA592_10860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA592_10870 PF04172 LrgB-like family FA592_10875 PF03788 LrgA family FA592_10880 PF02705 K+ potassium transporter FA592_10895 PF01098 Cell cycle protein FA592_10900 PF01479 S4 domain FA592_10900 PF00849 RNA pseudouridylate synthase FA592_10910 PF02390 Putative methyltransferase FA592_10915 PF00005 ABC transporter FA592_10930 PF00696 Amino acid kinase family FA592_10935 PF01192 RNA polymerase Rpb6 FA592_10940 PF13291 ACT domain FA592_10940 PF04607 Region found in RelA / SpoT proteins FA592_10940 PF02824 TGS domain FA592_10945 PF00579 tRNA synthetases class I (W and Y) FA592_10945 PF01479 S4 domain FA592_10950 PF03060 Nitronate monooxygenase FA592_10955 PF01520 N-acetylmuramoyl-L-alanine amidase FA592_10970 PF01336 OB-fold nucleic acid binding domain FA592_10970 PF02938 GAD domain FA592_10970 PF00152 tRNA synthetases class II (D, K and N) FA592_10975 PF00990 Diguanylate cyclase, GGDEF domain FA592_10985 PF01513 ATP-NAD kinase FA592_10990 PF13476 AAA domain FA592_10995 PF00990 Diguanylate cyclase, GGDEF domain FA592_10995 PF07694 5TMR of 5TMR-LYT FA592_11000 PF01026 TatD related DNase FA592_11005 PF05257 CHAP domain FA592_11005 PF01476 LysM domain FA592_11010 PF03330 Lytic transglycolase FA592_11010 PF05036 Sporulation related domain FA592_11015 PF00475 Imidazoleglycerol-phosphate dehydratase FA592_11035 PF01926 50S ribosome-binding GTPase FA592_11050 PF05223 NTF2-like N-terminal transpeptidase domain FA592_11050 PF03717 Penicillin-binding Protein dimerisation domain FA592_11050 PF00905 Penicillin binding protein transpeptidase domain FA592_11060 PF02130 Uncharacterized protein family UPF0054 FA592_11070 PF09334 tRNA synthetases class I (M) FA592_11070 PF01588 Putative tRNA binding domain FA592_11070 PF00133 tRNA synthetases class I (I, L, M and V) FA592_11080 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain FA592_11105 PF00749 tRNA synthetases class I (E and Q), catalytic domain FA592_11110 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain FA592_11110 PF00749 tRNA synthetases class I (E and Q), catalytic domain FA592_11130 PF02796 Helix-turn-helix domain of resolvase FA592_11130 PF00665 Integrase core domain FA592_11150 PF03264 NapC/NirT cytochrome c family, N-terminal region FA592_11155 PF02335 Cytochrome c552 FA592_11160 PF01578 Cytochrome C assembly protein FA592_11160 PF05140 ResB-like family FA592_11180 PF06821 Serine hydrolase FA592_11185 PF01810 LysE type translocator FA592_11190 PF00535 Glycosyl transferase family 2 FA592_11195 PF01636 Phosphotransferase enzyme family FA592_11205 PF09335 SNARE associated Golgi protein FA592_11215 PF09335 SNARE associated Golgi protein FA592_11220 PF13847 Methyltransferase domain FA592_11225 PF00230 Major intrinsic protein FA592_11235 PF00892 EamA-like transporter family FA592_11245 PF00037 4Fe-4S binding domain FA592_11270 PF02272 DHHA1 domain FA592_11270 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FA592_11270 PF01411 tRNA synthetases class II (A) FA592_11280 PF01568 Molydopterin dinucleotide binding domain FA592_11280 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FA592_11280 PF00384 Molybdopterin oxidoreductase FA592_11280 PF10518 TAT (twin-arginine translocation) pathway signal sequence FA592_11285 PF12800 4Fe-4S binding domain FA592_11285 PF12838 4Fe-4S dicluster domain FA592_11290 PF00037 4Fe-4S binding domain FA592_11290 PF12801 4Fe-4S binding domain FA592_11295 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) FA592_11300 PF00037 4Fe-4S binding domain FA592_11300 PF12800 4Fe-4S binding domain FA592_11300 PF13187 4Fe-4S dicluster domain FA592_11330 PF02001 Protein of unknown function DUF134 FA592_11350 PF01654 Cytochrome bd terminal oxidase subunit I FA592_11355 PF02322 Cytochrome bd terminal oxidase subunit II FA592_11360 PF01926 50S ribosome-binding GTPase FA592_11360 PF06071 Protein of unknown function (DUF933) FA592_11380 PF01568 Molydopterin dinucleotide binding domain FA592_11380 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FA592_11380 PF00384 Molybdopterin oxidoreductase FA592_11385 PF12838 4Fe-4S dicluster domain FA592_11385 PF13187 4Fe-4S dicluster domain FA592_11395 PF00072 Response regulator receiver domain FA592_11395 PF00486 Transcriptional regulatory protein, C terminal FA592_11405 PF08448 PAS fold FA592_11405 PF08447 PAS fold FA592_11405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA592_11410 PF00034 Cytochrome c FA592_11415 PF00355 Rieske [2Fe-2S] domain FA592_11415 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal FA592_11420 PF00032 Cytochrome b(C-terminal)/b6/petD FA592_11420 PF00033 Cytochrome b/b6/petB FA592_11435 PF10442 FIST C domain FA592_11435 PF00990 Diguanylate cyclase, GGDEF domain FA592_11435 PF00563 EAL domain FA592_11435 PF08495 FIST N domain FA592_11440 PF02666 Phosphatidylserine decarboxylase FA592_11445 PF03880 DbpA RNA binding domain FA592_11445 PF00271 Helicase conserved C-terminal domain FA592_11445 PF00270 DEAD/DEAH box helicase FA592_11455 PF13309 HTH domain FA592_11455 PF08348 YheO-like PAS domain FA592_11460 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FA592_11460 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FA592_11465 PF00672 HAMP domain FA592_11465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA592_11470 PF13613 Helix-turn-helix of DDE superfamily endonuclease FA592_11470 PF13359 DDE superfamily endonuclease FA592_11475 PF13359 DDE superfamily endonuclease FA592_11475 PF13613 Helix-turn-helix of DDE superfamily endonuclease FA592_11480 PF08502 LeuA allosteric (dimerisation) domain FA592_11480 PF00682 HMGL-like FA592_11485 PF01209 ubiE/COQ5 methyltransferase family FA592_11495 PF01810 LysE type translocator FA592_11500 PF11849 Domain of unknown function (DUF3369) FA592_11505 PF00672 HAMP domain FA592_11505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA592_11505 PF12729 Four helix bundle sensory module for signal transduction FA592_11515 PF01709 Transcriptional regulator FA592_11525 PF16868 NMT1-like family FA592_11540 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 FA592_11540 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) FA592_11550 PF00118 TCP-1/cpn60 chaperonin family FA592_11555 PF00166 Chaperonin 10 Kd subunit FA592_11565 PF14659 Phage integrase, N-terminal SAM-like domain FA592_11565 PF00589 Phage integrase family FA592_11585 PF02796 Helix-turn-helix domain of resolvase FA592_11585 PF00665 Integrase core domain FA592_11590 PF02321 Outer membrane efflux protein FA592_11595 PF00664 ABC transporter transmembrane region FA592_11595 PF00005 ABC transporter FA592_11595 PF03412 Peptidase C39 family FA592_11600 PF13533 Biotin-lipoyl like FA592_11630 PF04174 A circularly permuted ATPgrasp FA592_11635 PF01841 Transglutaminase-like superfamily FA592_11635 PF08379 Bacterial transglutaminase-like N-terminal region FA592_11665 PF14403 Circularly permuted ATP-grasp type 2 FA592_11675 PF01814 Hemerythrin HHE cation binding domain FA592_11680 PF06738 Putative threonine/serine exporter FA592_11685 PF06738 Putative threonine/serine exporter FA592_11685 PF12821 Threonine/Serine exporter, ThrE FA592_11690 PF00403 Heavy-metal-associated domain FA592_11695 PF01022 Bacterial regulatory protein, arsR family FA592_11710 PF00464 Serine hydroxymethyltransferase FA592_11715 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FA592_11715 PF02805 Metal binding domain of Ada FA592_11715 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FA592_11715 PF12833 Helix-turn-helix domain FA592_11720 PF02743 Cache domain FA592_11720 PF00672 HAMP domain FA592_11720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA592_11725 PF02581 Thiamine monophosphate synthase FA592_11740 PF03006 Haemolysin-III related FA592_11745 PF01810 LysE type translocator FA592_11750 PF00892 EamA-like transporter family FA592_11770 PF11490 DNA polymerase III polC-type N-terminus II FA592_11770 PF07733 Bacterial DNA polymerase III alpha NTPase domain FA592_11770 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FA592_11770 PF00929 Exonuclease FA592_11770 PF14579 Helix-hairpin-helix motif FA592_11770 PF02811 PHP domain FA592_11795 PF01717 Cobalamin-independent synthase, Catalytic domain FA592_11795 PF08267 Cobalamin-independent synthase, N-terminal domain FA592_11805 PF01435 Peptidase family M48 FA592_11825 PF01739 CheR methyltransferase, SAM binding domain FA592_11830 PF01339 CheB methylesterase FA592_11830 PF00072 Response regulator receiver domain FA592_11835 PF02789 Cytosol aminopeptidase family, N-terminal domain FA592_11835 PF00883 Cytosol aminopeptidase family, catalytic domain FA592_11845 PF00291 Pyridoxal-phosphate dependent enzyme FA592_11850 PF00156 Phosphoribosyl transferase domain FA592_11860 PF02502 Ribose/Galactose Isomerase FA592_11865 PF02163 Peptidase family M50 FA592_11870 PF10502 Signal peptidase, peptidase S26 FA592_11875 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FA592_11875 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FA592_11885 PF00202 Aminotransferase class-III FA592_11900 PF04055 Radical SAM superfamily FA592_11910 PF04851 Type III restriction enzyme, res subunit FA592_11910 PF00271 Helicase conserved C-terminal domain FA592_11940 PF02623 FliW protein FA592_11945 PF13525 Outer membrane lipoprotein FA592_11950 PF05362 Lon protease (S16) C-terminal proteolytic domain FA592_11950 PF02190 ATP-dependent protease La (LON) substrate-binding domain FA592_11950 PF00004 ATPase family associated with various cellular activities (AAA) FA592_11955 PF01084 Ribosomal protein S18 FA592_11960 PF00436 Single-strand binding protein family FA592_11965 PF01250 Ribosomal protein S6 FA592_11970 PF06144 DNA polymerase III, delta subunit FA592_11975 PF00773 RNB domain FA592_11985 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain FA592_11985 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain FA592_11990 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FA592_11995 PF03776 Septum formation topological specificity factor MinE FA592_12000 PF04748 Divergent polysaccharide deacetylase FA592_12010 PF01925 Sulfite exporter TauE/SafE FA592_12015 PF04073 Aminoacyl-tRNA editing domain FA592_12025 PF03313 Serine dehydratase alpha chain FA592_12025 PF03315 Serine dehydratase beta chain FA592_12030 PF03652 Holliday junction resolvase FA592_12035 PF03458 UPF0126 domain FA592_12040 PF00202 Aminotransferase class-III FA592_12055 PF01648 4'-phosphopantetheinyl transferase superfamily FA592_12060 PF03748 Flagellar basal body-associated protein FliL FA592_12065 PF18073 Rubredoxin metal binding domain FA592_12070 PF00448 SRP54-type protein, GTPase domain FA592_12075 PF00578 AhpC/TSA family FA592_12085 PF01966 HD domain FA592_12085 PF00013 KH domain FA592_12085 PF12072 Domain of unknown function (DUF3552) FA592_12090 PF00664 ABC transporter transmembrane region FA592_12090 PF00005 ABC transporter FA592_12110 PF01758 Sodium Bile acid symporter family FA592_12115 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FA592_12125 PF00486 Transcriptional regulatory protein, C terminal FA592_12125 PF00072 Response regulator receiver domain FA592_12130 PF02954 Bacterial regulatory protein, Fis family FA592_12130 PF00158 Sigma-54 interaction domain FA592_12130 PF00072 Response regulator receiver domain FA592_12140 PF00512 His Kinase A (phospho-acceptor) domain FA592_12140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA592_12140 PF00497 Bacterial extracellular solute-binding proteins, family 3 FA592_12145 PF08448 PAS fold FA592_12145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA592_12145 PF08447 PAS fold FA592_12155 PF04073 Aminoacyl-tRNA editing domain FA592_12195 PF00925 GTP cyclohydrolase II FA592_12195 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FA592_12200 PF02254 TrkA-N domain FA592_12200 PF00999 Sodium/hydrogen exchanger family FA592_12210 PF00672 HAMP domain FA592_12210 PF00512 His Kinase A (phospho-acceptor) domain FA592_12210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA592_12215 PF00149 Calcineurin-like phosphoesterase FA592_12230 PF13359 DDE superfamily endonuclease FA592_12230 PF13613 Helix-turn-helix of DDE superfamily endonuclease FA592_12235 PF13613 Helix-turn-helix of DDE superfamily endonuclease FA592_12235 PF13359 DDE superfamily endonuclease FA592_12250 PF00005 ABC transporter FA592_12270 PF13419 Haloacid dehalogenase-like hydrolase FA592_12275 PF00465 Iron-containing alcohol dehydrogenase FA592_12280 PF03707 Bacterial signalling protein N terminal repeat FA592_12280 PF00990 Diguanylate cyclase, GGDEF domain FA592_12280 PF00563 EAL domain FA592_12305 PF01327 Polypeptide deformylase FA592_12310 PF03061 Thioesterase superfamily FA592_12325 PF03167 Uracil DNA glycosylase superfamily FA592_12340 PF00682 HMGL-like FA592_12345 PF04055 Radical SAM superfamily FA592_12345 PF02579 Dinitrogenase iron-molybdenum cofactor FA592_12350 PF00072 Response regulator receiver domain FA592_12355 PF00486 Transcriptional regulatory protein, C terminal FA592_12355 PF00072 Response regulator receiver domain FA592_12360 PF00990 Diguanylate cyclase, GGDEF domain FA592_12360 PF08495 FIST N domain FA592_12360 PF00563 EAL domain FA592_12360 PF10442 FIST C domain FA592_12365 PF08448 PAS fold FA592_12365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA592_12365 PF08447 PAS fold FA592_12370 PF00158 Sigma-54 interaction domain FA592_12370 PF00072 Response regulator receiver domain FA592_12370 PF02954 Bacterial regulatory protein, Fis family FA592_12375 PF00753 Metallo-beta-lactamase superfamily FA592_12375 PF00258 Flavodoxin FA592_12380 PF02579 Dinitrogenase iron-molybdenum cofactor FA592_12390 PF00148 Nitrogenase component 1 type Oxidoreductase FA592_12395 PF00148 Nitrogenase component 1 type Oxidoreductase FA592_12400 PF14537 Cytochrome c3 FA592_12400 PF00890 FAD binding domain FA592_12425 PF02574 Homocysteine S-methyltransferase FA592_12435 PF12795 Mechanosensitive ion channel porin domain FA592_12435 PF00924 Mechanosensitive ion channel FA592_12435 PF12794 Mechanosensitive ion channel inner membrane domain 1 FA592_12440 PF02579 Dinitrogenase iron-molybdenum cofactor FA592_12445 PF03270 Protein of unknown function, DUF269 FA592_12455 PF03206 Nitrogen fixation protein NifW FA592_12460 PF04319 NifZ domain FA592_12475 PF04552 Sigma-54, DNA binding domain FA592_12475 PF00309 Sigma-54 factor, Activator interacting domain (AID) FA592_12475 PF04963 Sigma-54 factor, core binding domain FA592_12490 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FA592_12500 PF00905 Penicillin binding protein transpeptidase domain FA592_12505 PF03707 Bacterial signalling protein N terminal repeat FA592_12505 PF00990 Diguanylate cyclase, GGDEF domain FA592_12505 PF00563 EAL domain FA592_12525 PF01863 Protein of unknown function DUF45 FA592_12535 PF02567 Phenazine biosynthesis-like protein FA592_12540 PF00892 EamA-like transporter family FA592_12545 PF12833 Helix-turn-helix domain FA592_12550 PF00561 alpha/beta hydrolase fold FA592_12565 PF13536 Putative multidrug resistance efflux transporter FA592_12575 PF05230 MASE2 domain FA592_12575 PF00990 Diguanylate cyclase, GGDEF domain FA592_12580 PF01063 Amino-transferase class IV FA592_12585 PF00392 Bacterial regulatory proteins, gntR family FA592_12585 PF00155 Aminotransferase class I and II FA592_12600 PF00990 Diguanylate cyclase, GGDEF domain FA592_12600 PF08448 PAS fold FA592_12615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA592_12615 PF00672 HAMP domain FA592_12620 PF13359 DDE superfamily endonuclease FA592_12620 PF13613 Helix-turn-helix of DDE superfamily endonuclease FA592_12625 PF13359 DDE superfamily endonuclease FA592_12625 PF13613 Helix-turn-helix of DDE superfamily endonuclease FA592_12640 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family FA592_12655 PF00148 Nitrogenase component 1 type Oxidoreductase FA592_12655 PF11844 Domain of unknown function (DUF3364) FA592_12660 PF00072 Response regulator receiver domain FA592_12665 PF02796 Helix-turn-helix domain of resolvase FA592_12665 PF00665 Integrase core domain FA592_12715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA592_12720 PF00795 Carbon-nitrogen hydrolase FA592_12720 PF00583 Acetyltransferase (GNAT) family FA592_12740 PF08447 PAS fold FA592_12740 PF13426 PAS domain FA592_12740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA592_12750 PF07992 Pyridine nucleotide-disulphide oxidoreductase FA592_12750 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FA592_12755 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA FA592_12760 PF13247 4Fe-4S dicluster domain FA592_12765 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FA592_12765 PF00374 Nickel-dependent hydrogenase FA592_12770 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FA592_12780 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FA592_12795 PF05977 Transmembrane secretion effector FA592_12800 PF00857 Isochorismatase family FA592_12810 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FA592_12815 PF00155 Aminotransferase class I and II FA592_12820 PF02492 CobW/HypB/UreG, nucleotide-binding domain FA592_12820 PF07683 Cobalamin synthesis protein cobW C-terminal domain FA592_12825 PF04328 Selenoprotein, putative FA592_12830 PF02554 Carbon starvation protein CstA FA592_12830 PF13722 5TM C-terminal transporter carbon starvation CstA FA592_12840 PF00890 FAD binding domain FA592_12840 PF02910 Fumarate reductase flavoprotein C-term FA592_12845 PF06988 NifT/FixU protein FA592_12850 PF02954 Bacterial regulatory protein, Fis family FA592_12850 PF13185 GAF domain FA592_12850 PF00158 Sigma-54 interaction domain FA592_12875 PF00586 AIR synthase related protein, N-terminal domain FA592_12875 PF02769 AIR synthase related protein, C-terminal domain FA592_12880 PF01142 tRNA pseudouridine synthase D (TruD) FA592_12890 PF02254 TrkA-N domain FA592_12890 PF00999 Sodium/hydrogen exchanger family FA592_12890 PF02080 TrkA-C domain FA592_12895 PF00990 Diguanylate cyclase, GGDEF domain FA592_12895 PF03707 Bacterial signalling protein N terminal repeat FA592_12895 PF00563 EAL domain FA592_12905 PF00990 Diguanylate cyclase, GGDEF domain FA592_12910 PF08543 Phosphomethylpyrimidine kinase FA592_12920 PF02110 Hydroxyethylthiazole kinase family FA592_12930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FA592_12930 PF00672 HAMP domain FA592_12930 PF02743 Cache domain FA592_12945 PF16326 ABC transporter C-terminal domain FA592_12945 PF00005 ABC transporter FA592_12945 PF12848 ABC transporter FA592_12950 PF13677 Membrane MotB of proton-channel complex MotA/MotB FA592_12950 PF00691 OmpA family FA592_12955 PF01618 MotA/TolQ/ExbB proton channel family FA592_12960 PF08361 MAATS-type transcriptional repressor, C-terminal region FA592_12960 PF00440 Bacterial regulatory proteins, tetR family FA592_12965 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FA592_12970 PF00873 AcrB/AcrD/AcrF family FA592_12975 PF02321 Outer membrane efflux protein FA592_12990 PF00881 Nitroreductase family FA592_13005 PF00905 Penicillin binding protein transpeptidase domain FA592_13005 PF00912 Transglycosylase FA592_13005 PF17092 Penicillin-binding protein OB-like domain FA592_13020 PF00501 AMP-binding enzyme FA592_13020 PF14535 AMP-binding enzyme C-terminal domain FA592_13030 PF00501 AMP-binding enzyme FA592_13030 PF14535 AMP-binding enzyme C-terminal domain FA592_13045 PF00474 Sodium:solute symporter family FA592_13055 PF02561 Flagellar protein FliS FA592_13060 PF02465 Flagellar hook-associated protein 2 N-terminus FA592_13060 PF07195 Flagellar hook-associated protein 2 C-terminus FA592_13060 PF07196 Flagellin hook IN motif FA592_13085 PF02119 Flagellar P-ring protein FA592_13105 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FA592_13105 PF00460 Flagella basal body rod protein FA592_13110 PF12911 N-terminal TM domain of oligopeptide transport permease C FA592_13110 PF00528 Binding-protein-dependent transport system inner membrane component FA592_13120 PF00916 Sulfate permease family FA592_13120 PF01740 STAS domain FA592_13125 PF01361 Tautomerase enzyme FA592_13130 PF00119 ATP synthase A chain FA592_13140 PF02581 Thiamine monophosphate synthase FA592_13140 PF17792 ThiD2 family FA592_13145 PF02637 GatB domain FA592_13145 PF02934 GatB/GatE catalytic domain FA592_13155 PF01915 Glycosyl hydrolase family 3 C-terminal domain FA592_13155 PF00933 Glycosyl hydrolase family 3 N terminal domain FA592_13160 PF01979 Amidohydrolase family FA592_13165 PF01416 tRNA pseudouridine synthase FA592_13175 PF06750 Bacterial Peptidase A24 N-terminal domain FA592_13175 PF01478 Type IV leader peptidase family FA592_13185 PF02441 Flavoprotein FA592_13185 PF04127 DNA / pantothenate metabolism flavoprotein FA592_13190 PF12804 MobA-like NTP transferase domain FA592_13190 PF00132 Bacterial transferase hexapeptide (six repeats) FA592_13195 PF00813 FliP family FA592_13200 PF01263 Aldose 1-epimerase FA592_13205 PF02525 Flavodoxin-like fold FA592_13220 PF13194 Domain of unknown function (DUF4010) FA592_13225 PF08497 Radical SAM N-terminal FA592_13225 PF04055 Radical SAM superfamily FA592_13230 PF00342 Phosphoglucose isomerase FA592_13245 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FA592_13245 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal FA592_13250 PF00374 Nickel-dependent hydrogenase FA592_13255 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal FA592_13255 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FA592_13255 PF10518 TAT (twin-arginine translocation) pathway signal sequence FA592_13260 PF00374 Nickel-dependent hydrogenase FA592_13265 PF01292 Prokaryotic cytochrome b561 FA592_13270 PF01750 Hydrogenase maturation protease FA592_13280 PF00708 Acylphosphatase FA592_13280 PF17788 HypF Kae1-like domain FA592_13280 PF01300 Telomere recombination FA592_13280 PF07503 HypF finger FA592_13285 PF08753 NikR C terminal nickel binding domain FA592_13285 PF01402 Ribbon-helix-helix protein, copG family FA592_13295 PF02492 CobW/HypB/UreG, nucleotide-binding domain FA592_13300 PF01455 HupF/HypC family FA592_13305 PF01924 Hydrogenase formation hypA family FA592_13310 PF00586 AIR synthase related protein, N-terminal domain FA592_13310 PF02769 AIR synthase related protein, C-terminal domain FA592_13315 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA FA592_13320 PF00583 Acetyltransferase (GNAT) family FA592_13325 PF13419 Haloacid dehalogenase-like hydrolase FA592_13340 PF03971 Monomeric isocitrate dehydrogenase FA592_13345 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FA592_13345 PF00056 lactate/malate dehydrogenase, NAD binding domain FA592_13350 PF08442 ATP-grasp domain FA592_13350 PF00549 CoA-ligase FA592_13355 PF00549 CoA-ligase FA592_13355 PF02629 CoA binding domain FA592_13365 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase FA592_13365 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg FA592_13365 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II FA592_13415 PF13359 DDE superfamily endonuclease FA592_13415 PF13613 Helix-turn-helix of DDE superfamily endonuclease FA592_13420 PF13359 DDE superfamily endonuclease FA592_13420 PF13613 Helix-turn-helix of DDE superfamily endonuclease FA592_13460 PF00206 Lyase FA592_13460 PF10415 Fumarase C C-terminus FA592_13485 PF00005 ABC transporter FA592_13500 PF01914 MarC family integral membrane protein FA592_13515 PF00072 Response regulator receiver domain FA592_13515 PF00990 Diguanylate cyclase, GGDEF domain FA592_13520 PF01168 Alanine racemase, N-terminal domain FA592_13525 PF17820 PDZ domain FA592_13525 PF02163 Peptidase family M50 FA592_13530 PF01066 CDP-alcohol phosphatidyltransferase FA592_13540 PF00701 Dihydrodipicolinate synthetase family FA592_13550 PF01180 Dihydroorotate dehydrogenase FA592_13555 PF00005 ABC transporter FA592_13555 PF00664 ABC transporter transmembrane region FA592_13560 PF01406 tRNA synthetases class I (C) catalytic domain FA592_13565 PF03023 Lipid II flippase MurJ FA592_13575 PF01330 RuvA N terminal domain FA592_13575 PF07499 RuvA, C-terminal domain FA592_13595 PF00708 Acylphosphatase FA592_13600 PF01225 Mur ligase family, catalytic domain FA592_13600 PF02875 Mur ligase family, glutamate ligase domain FA592_13600 PF08245 Mur ligase middle domain FA592_13605 PF07085 DRTGG domain FA592_13605 PF01515 Phosphate acetyl/butaryl transferase FA592_13610 PF00871 Acetokinase family FA592_13615 PF09424 Yqey-like protein FA592_13620 PF02107 Flagellar L-ring protein FA592_13630 PF00482 Type II secretion system (T2SS), protein F FA592_13635 PF00437 Type II/IV secretion system protein FA592_13650 PF00263 Bacterial type II and III secretion system protein FA592_13650 PF03958 Bacterial type II/III secretion system short domain FA592_13670 PF01926 50S ribosome-binding GTPase FA592_13670 PF07650 KH domain FA592_13675 PF07724 AAA domain (Cdc48 subfamily) FA592_13675 PF10431 C-terminal, D2-small domain, of ClpB protein FA592_13680 PF00227 Proteasome subunit FA592_13685 PF01281 Ribosomal protein L9, N-terminal domain FA592_13685 PF03948 Ribosomal protein L9, C-terminal domain FA592_13695 PF00764 Arginosuccinate synthase FA592_13700 PF01479 S4 domain FA592_13705 PF02885 Glycosyl transferase family, helical bundle domain FA592_13705 PF00591 Glycosyl transferase family, a/b domain FA592_13710 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE FA592_13715 PF12399 Branched-chain amino acid ATP-binding cassette transporter FA592_13715 PF00005 ABC transporter FA592_13735 PF02796 Helix-turn-helix domain of resolvase FA592_13735 PF00665 Integrase core domain FA592_13740 PF00885 6,7-dimethyl-8-ribityllumazine synthase FA592_13765 PF08448 PAS fold FA592_13765 PF08447 PAS fold FA592_13765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA592_13780 PF01695 IstB-like ATP binding protein FA592_13785 PF00665 Integrase core domain FA592_13785 PF02796 Helix-turn-helix domain of resolvase FA592_13815 PF01381 Helix-turn-helix FA592_13850 PF01695 IstB-like ATP binding protein FA592_13875 PF11799 impB/mucB/samB family C-terminal domain FA592_13875 PF00817 impB/mucB/samB family FA592_13945 PF13614 AAA domain FA592_13950 PF13614 AAA domain FA592_14040 PF04317 YcjX-like family, DUF463 FA592_14045 PF04317 YcjX-like family, DUF463 FA592_14050 PF10502 Signal peptidase, peptidase S26 FA592_14060 PF00817 impB/mucB/samB family FA592_14060 PF11799 impB/mucB/samB family C-terminal domain FA592_14065 PF02146 Sir2 family