Sdiek1_0001 SM00382 ATPases associated with a variety of cellular activities Sdiek1_0001 SM00760 Bacterial dnaA protein helix-turn-helix domain Sdiek1_0002 SM00480 DNA polymerase III beta subunit Sdiek1_0003 SM00387 Histidine kinase-like ATPases Sdiek1_0003 SM00433 TopoisomeraseII Sdiek1_0004 SM00052 Putative diguanylate phosphodiesterase Sdiek1_0004 SM00267 diguanylate cyclase Sdiek1_0007 SM00986 Uracil DNA glycosylase superfamily Sdiek1_0007 SM00987 UreE urease accessory protein, C-terminal domain Sdiek1_0008 SM00478 endonuclease III Sdiek1_0008 SM00525 Sdiek1_0008 Sdiek1_0009 SM00382 ATPases associated with a variety of cellular activities Sdiek1_0016 SM00345 helix_turn_helix gluconate operon transcriptional repressor Sdiek1_0016 SM00895 Sdiek1_0016 Sdiek1_0020 SM00671 Sel1-like repeats. Sdiek1_0026 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdiek1_0034 SM00342 helix_turn_helix, arabinose operon control protein Sdiek1_0034 SM00871 Bacterial transcription activator, effector binding domain Sdiek1_0044 SM00342 helix_turn_helix, arabinose operon control protein Sdiek1_0048 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Sdiek1_0049 SM01235 Sdiek1_0049 Sdiek1_0088 SM00998 Adenylosuccinate lyase C-terminus Sdiek1_0094 SM00650 Ribosomal RNA adenine dimethylases Sdiek1_0095 SM00849 Metallo-beta-lactamase superfamily Sdiek1_0096 SM00116 Domain in cystathionine beta-synthase and other proteins. Sdiek1_0097 SM00363 S4 RNA-binding domain Sdiek1_0098 SM00382 ATPases associated with a variety of cellular activities Sdiek1_0106 SM00047 Lysozyme subfamily 2 Sdiek1_0107 SM00937 Sdiek1_0107 Sdiek1_0112 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Sdiek1_0131 SM00387 Histidine kinase-like ATPases Sdiek1_0131 SM00388 His Kinase A (phosphoacceptor) domain Sdiek1_0132 SM00448 cheY-homologous receiver domain Sdiek1_0132 SM00862 Transcriptional regulatory protein, C terminal Sdiek1_0136 SM00382 ATPases associated with a variety of cellular activities Sdiek1_0142 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdiek1_0142 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Sdiek1_0142 SM01049 Sdiek1_0142 Sdiek1_0144 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Sdiek1_0148 SM00387 Histidine kinase-like ATPases Sdiek1_0149 SM00448 cheY-homologous receiver domain Sdiek1_0151 SM00938 Nitrogen regulatory protein P-II Sdiek1_0156 SM00448 cheY-homologous receiver domain Sdiek1_0156 SM00862 Transcriptional regulatory protein, C terminal Sdiek1_0157 SM00387 Histidine kinase-like ATPases Sdiek1_0160 SM00062 Bacterial periplasmic substrate-binding proteins Sdiek1_0160 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. Sdiek1_0161 SM00382 ATPases associated with a variety of cellular activities Sdiek1_0167 SM00518 AP endonuclease family 2 Sdiek1_0170 SM00382 ATPases associated with a variety of cellular activities Sdiek1_0177 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Sdiek1_0191 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdiek1_0193 SM00729 Elongator protein 3, MiaB family, Radical SAM Sdiek1_0194 SM00852 Probable molybdopterin binding domain Sdiek1_0199 SM00967 RNA 2'-O ribose methyltransferase substrate binding Sdiek1_0209 SM00729 Elongator protein 3, MiaB family, Radical SAM Sdiek1_0213 SM00244 prohibitin homologues Sdiek1_0221 SM00382 ATPases associated with a variety of cellular activities Sdiek1_0221 SM00994 ClpX C4-type zinc finger Sdiek1_0221 SM01086 C-terminal, D2-small domain, of ClpB protein Sdiek1_0224 SM00851 MGS-like domain Sdiek1_0224 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Sdiek1_0232 SM00859 Semialdehyde dehydrogenase, NAD binding domain Sdiek1_0234 SM00260 Two component signalling adaptor domain Sdiek1_0234 SM00448 cheY-homologous receiver domain Sdiek1_0235 SM00073 Histidine Phosphotransfer domain Sdiek1_0235 SM00260 Two component signalling adaptor domain Sdiek1_0235 SM00387 Histidine kinase-like ATPases Sdiek1_0235 SM00448 cheY-homologous receiver domain Sdiek1_0235 SM01231 Sdiek1_0235 Sdiek1_0236 SM00260 Two component signalling adaptor domain Sdiek1_0241 SM00382 ATPases associated with a variety of cellular activities Sdiek1_0246 SM00830 Chorismate mutase type II Sdiek1_0251 SM00861 Transketolase, pyrimidine binding domain Sdiek1_0254 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdiek1_0254 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Sdiek1_0257 SM00562 Sdiek1_0257 Sdiek1_0265 SM00327 von Willebrand factor (vWF) type A domain Sdiek1_0266 SM00028 Tetratricopeptide repeats Sdiek1_0266 SM00327 von Willebrand factor (vWF) type A domain Sdiek1_0272 SM00387 Histidine kinase-like ATPases Sdiek1_0272 SM00388 His Kinase A (phosphoacceptor) domain Sdiek1_0273 SM00448 cheY-homologous receiver domain Sdiek1_0273 SM00862 Transcriptional regulatory protein, C terminal Sdiek1_0274 SM00905 Dihydroneopterin aldolase Sdiek1_0275 SM01207 Sdiek1_0275 Sdiek1_0293 SM00052 Putative diguanylate phosphodiesterase Sdiek1_0293 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Sdiek1_0293 SM00267 diguanylate cyclase Sdiek1_0294 SM00357 Cold shock protein domain Sdiek1_0295 SM00387 Histidine kinase-like ATPases Sdiek1_0295 SM00388 His Kinase A (phosphoacceptor) domain Sdiek1_0296 SM00448 cheY-homologous receiver domain Sdiek1_0296 SM00862 Transcriptional regulatory protein, C terminal Sdiek1_0300 SM00729 Elongator protein 3, MiaB family, Radical SAM Sdiek1_0301 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Sdiek1_0304 SM00052 Putative diguanylate phosphodiesterase Sdiek1_0304 SM00091 PAS domain Sdiek1_0304 SM00267 diguanylate cyclase Sdiek1_0304 SM00897 FIST N domain Sdiek1_0304 SM01204 Sdiek1_0304 Sdiek1_0305 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Sdiek1_0308 SM00448 cheY-homologous receiver domain Sdiek1_0308 SM00862 Transcriptional regulatory protein, C terminal Sdiek1_0309 SM00387 Histidine kinase-like ATPases Sdiek1_0309 SM00388 His Kinase A (phosphoacceptor) domain Sdiek1_0311 SM00729 Elongator protein 3, MiaB family, Radical SAM Sdiek1_0320 SM01131 Sdiek1_0320 Sdiek1_0328 SM00062 Bacterial periplasmic substrate-binding proteins Sdiek1_0328 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Sdiek1_0328 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Sdiek1_0328 SM00091 PAS domain Sdiek1_0328 SM00267 diguanylate cyclase Sdiek1_0331 SM00342 helix_turn_helix, arabinose operon control protein Sdiek1_0342 SM00382 ATPases associated with a variety of cellular activities Sdiek1_0342 SM00962 SRP54-type protein, GTPase domain Sdiek1_0356 SM01400 Sdiek1_0356 Sdiek1_0361 SM01321 Sdiek1_0361 Sdiek1_0362 SM00434 DNA Topoisomerase IV Sdiek1_0365 SM00382 ATPases associated with a variety of cellular activities Sdiek1_0365 SM00448 cheY-homologous receiver domain Sdiek1_0366 SM00859 Semialdehyde dehydrogenase, NAD binding domain Sdiek1_0378 SM00487 DEAD-like helicases superfamily Sdiek1_0379 SM00974 Sdiek1_0379 Sdiek1_0380 SM00530 Helix-turn-helix XRE-family like proteins Sdiek1_0385 SM00857 Resolvase, N terminal domain Sdiek1_0391 SM00382 ATPases associated with a variety of cellular activities Sdiek1_0391 SM00930 Sdiek1_0391 Sdiek1_0399 SM00342 helix_turn_helix, arabinose operon control protein Sdiek1_0409 SM00052 Putative diguanylate phosphodiesterase Sdiek1_0409 SM00267 diguanylate cyclase Sdiek1_0425 SM00382 ATPases associated with a variety of cellular activities Sdiek1_0426 SM00382 ATPases associated with a variety of cellular activities Sdiek1_0437 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. Sdiek1_0437 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. Sdiek1_0438 SM00649 Ribosomal protein L11/L12 Sdiek1_0443 SM00663 RNA polymerase I subunit A N-terminus Sdiek1_0446 SM00838 Elongation factor G C-terminus Sdiek1_0446 SM00889 Elongation factor G, domain IV Sdiek1_0454 SM00448 cheY-homologous receiver domain Sdiek1_0456 SM00387 Histidine kinase-like ATPases Sdiek1_0457 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdiek1_0460 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Sdiek1_0468 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Sdiek1_0468 SM00091 PAS domain Sdiek1_0468 SM00267 diguanylate cyclase Sdiek1_0470 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Sdiek1_0477 SM01005 Alanine racemase, C-terminal domain Sdiek1_0478 SM00267 diguanylate cyclase Sdiek1_0482 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdiek1_0488 SM01004 Delta-aminolevulinic acid dehydratase Sdiek1_0491 SM00729 Elongator protein 3, MiaB family, Radical SAM Sdiek1_0498 SM00062 Bacterial periplasmic substrate-binding proteins Sdiek1_0498 SM00267 diguanylate cyclase Sdiek1_0501 SM00100 Cyclic nucleotide-monophosphate binding domain Sdiek1_0501 SM00419 helix_turn_helix, cAMP Regulatory protein Sdiek1_0503 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Sdiek1_0503 SM00091 PAS domain Sdiek1_0503 SM00267 diguanylate cyclase Sdiek1_0503 SM01079 Sdiek1_0503 Sdiek1_0511 SM00382 ATPases associated with a variety of cellular activities Sdiek1_0520 SM00382 ATPases associated with a variety of cellular activities Sdiek1_0523 SM00072 Guanylate kinase homologues. Sdiek1_0523 SM00382 ATPases associated with a variety of cellular activities Sdiek1_0525 SM00836 DALR anticodon binding domain Sdiek1_0525 SM01016 Arginyl tRNA synthetase N terminal dom Sdiek1_0526 SM00477 DNA/RNA non-specific endonuclease Sdiek1_0526 SM00892 DNA/RNA non-specific endonuclease Sdiek1_0527 SM00052 Putative diguanylate phosphodiesterase Sdiek1_0527 SM00267 diguanylate cyclase Sdiek1_0532 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Sdiek1_0539 SM00729 Elongator protein 3, MiaB family, Radical SAM Sdiek1_0545 SM00729 Elongator protein 3, MiaB family, Radical SAM Sdiek1_0547 SM00937 Sdiek1_0547 Sdiek1_0552 SM00382 ATPases associated with a variety of cellular activities Sdiek1_0553 SM00357 Cold shock protein domain Sdiek1_0553 SM00382 ATPases associated with a variety of cellular activities Sdiek1_0553 SM00959 Rho termination factor, N-terminal domain Sdiek1_0555 SM00052 Putative diguanylate phosphodiesterase Sdiek1_0555 SM00091 PAS domain Sdiek1_0555 SM00267 diguanylate cyclase Sdiek1_0558 SM00382 ATPases associated with a variety of cellular activities Sdiek1_0570 SM00487 DEAD-like helicases superfamily Sdiek1_0570 SM00490 helicase superfamily c-terminal domain Sdiek1_0575 SM00387 Histidine kinase-like ATPases Sdiek1_0575 SM01049 Sdiek1_0575 Sdiek1_0576 SM00448 cheY-homologous receiver domain Sdiek1_0576 SM00862 Transcriptional regulatory protein, C terminal Sdiek1_0583 SM00382 ATPases associated with a variety of cellular activities Sdiek1_0584 SM00382 ATPases associated with a variety of cellular activities Sdiek1_0597 SM00116 Domain in cystathionine beta-synthase and other proteins. Sdiek1_0597 SM01240 Sdiek1_0597 Sdiek1_0605 SM00463 Small MutS-related domain Sdiek1_0605 SM00533 DNA-binding domain of DNA mismatch repair MUTS family Sdiek1_0605 SM00534 ATPase domain of DNA mismatch repair MUTS family Sdiek1_0612 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Sdiek1_0612 SM00245 tail specific protease Sdiek1_0623 SM00470 ParB-like nuclease domain Sdiek1_0630 SM00382 ATPases associated with a variety of cellular activities Sdiek1_0640 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. Sdiek1_0668 SM00825 Beta-ketoacyl synthase Sdiek1_0680 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs Sdiek1_0680 SM00474 3'-5' exonuclease Sdiek1_0680 SM00475 5'-3' exonuclease Sdiek1_0680 SM00482 DNA polymerase A domain Sdiek1_0684 SM00271 DnaJ molecular chaperone homology domain Sdiek1_0686 SM00448 cheY-homologous receiver domain Sdiek1_0686 SM00862 Transcriptional regulatory protein, C terminal Sdiek1_0687 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Sdiek1_0687 SM00387 Histidine kinase-like ATPases Sdiek1_0689 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Sdiek1_0689 SM00091 PAS domain Sdiek1_0689 SM00267 diguanylate cyclase Sdiek1_0690 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdiek1_0690 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Sdiek1_0700 SM00267 diguanylate cyclase Sdiek1_0701 SM00382 ATPases associated with a variety of cellular activities Sdiek1_0708 SM00448 cheY-homologous receiver domain Sdiek1_0709 SM00387 Histidine kinase-like ATPases Sdiek1_0709 SM00388 His Kinase A (phosphoacceptor) domain Sdiek1_0709 SM00448 cheY-homologous receiver domain Sdiek1_0710 SM00671 Sel1-like repeats. Sdiek1_0712 SM00465 GIY-YIG type nucleases (URI domain) Sdiek1_0718 SM01209 Sdiek1_0718 Sdiek1_0718 SM01210 Sdiek1_0718 Sdiek1_0721 SM00316 Ribosomal protein S1-like RNA-binding domain Sdiek1_0721 SM00322 K homology RNA-binding domain Sdiek1_0731 SM00874 tRNA synthetase B5 domain Sdiek1_0731 SM00896 Ferredoxin-fold anticodon binding domain Sdiek1_0734 SM00316 Ribosomal protein S1-like RNA-binding domain Sdiek1_0743 SM00841 Elongation factor P, C-terminal Sdiek1_0743 SM01185 Sdiek1_0743 Sdiek1_0744 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdiek1_0744 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Sdiek1_0744 SM01358 Sdiek1_0744 Sdiek1_0746 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdiek1_0747 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdiek1_0748 SM00533 DNA-binding domain of DNA mismatch repair MUTS family Sdiek1_0748 SM00534 ATPase domain of DNA mismatch repair MUTS family Sdiek1_0752 SM00267 diguanylate cyclase Sdiek1_0761 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdiek1_0761 SM01049 Sdiek1_0761 Sdiek1_0763 SM00481 DNA polymerase alpha chain like domain Sdiek1_0764 SM00387 Histidine kinase-like ATPases Sdiek1_0764 SM00388 His Kinase A (phosphoacceptor) domain Sdiek1_0773 SM00060 Fibronectin type 3 domain Sdiek1_0775 SM00382 ATPases associated with a variety of cellular activities Sdiek1_0780 SM01409 Sdiek1_0780 Sdiek1_0781 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Sdiek1_0781 SM00954 Region found in RelA / SpoT proteins Sdiek1_0782 SM00363 S4 RNA-binding domain Sdiek1_0784 SM00646 Sdiek1_0784 Sdiek1_0785 SM00852 Probable molybdopterin binding domain Sdiek1_0788 SM00267 diguanylate cyclase Sdiek1_0791 SM00382 ATPases associated with a variety of cellular activities Sdiek1_0792 SM00267 diguanylate cyclase Sdiek1_0792 SM00448 cheY-homologous receiver domain Sdiek1_0794 SM00257 Lysin motif Sdiek1_0816 SM00845 GatB domain Sdiek1_0819 SM00448 cheY-homologous receiver domain Sdiek1_0819 SM00862 Transcriptional regulatory protein, C terminal Sdiek1_0821 SM00062 Bacterial periplasmic substrate-binding proteins Sdiek1_0821 SM00387 Histidine kinase-like ATPases Sdiek1_0830 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdiek1_0832 SM00100 Cyclic nucleotide-monophosphate binding domain Sdiek1_0832 SM00419 helix_turn_helix, cAMP Regulatory protein Sdiek1_0837 SM00419 helix_turn_helix, cAMP Regulatory protein Sdiek1_0843 SM00450 Rhodanese Homology Domain Sdiek1_0864 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Sdiek1_0869 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Sdiek1_0874 SM00320 WD40 repeats Sdiek1_0876 SM00091 PAS domain Sdiek1_0888 SM00450 Rhodanese Homology Domain Sdiek1_0890 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Sdiek1_0893 SM00448 cheY-homologous receiver domain Sdiek1_0893 SM00862 Transcriptional regulatory protein, C terminal Sdiek1_0895 SM00387 Histidine kinase-like ATPases Sdiek1_0896 SM00387 Histidine kinase-like ATPases Sdiek1_0897 SM00448 cheY-homologous receiver domain Sdiek1_0897 SM00862 Transcriptional regulatory protein, C terminal Sdiek1_0905 SM00052 Putative diguanylate phosphodiesterase Sdiek1_0905 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Sdiek1_0905 SM00091 PAS domain Sdiek1_0905 SM00448 cheY-homologous receiver domain Sdiek1_0907 SM00487 DEAD-like helicases superfamily Sdiek1_0907 SM00490 helicase superfamily c-terminal domain Sdiek1_0911 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdiek1_0916 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Sdiek1_0916 SM00091 PAS domain Sdiek1_0916 SM00448 cheY-homologous receiver domain Sdiek1_0916 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Sdiek1_0917 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdiek1_0920 SM00530 Helix-turn-helix XRE-family like proteins Sdiek1_0929 SM00883 Chaperonin 10 Kd subunit Sdiek1_0931 SM00267 diguanylate cyclase Sdiek1_0959 SM00530 Helix-turn-helix XRE-family like proteins Sdiek1_0970 SM00382 ATPases associated with a variety of cellular activities Sdiek1_0974 SM00382 ATPases associated with a variety of cellular activities Sdiek1_0979 SM00710 Parallel beta-helix repeats Sdiek1_0982 SM00091 PAS domain Sdiek1_0982 SM00387 Histidine kinase-like ATPases Sdiek1_0983 SM00448 cheY-homologous receiver domain Sdiek1_0983 SM00862 Transcriptional regulatory protein, C terminal Sdiek1_0990 SM00052 Putative diguanylate phosphodiesterase Sdiek1_0992 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdiek1_1007 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Sdiek1_1010 SM00387 Histidine kinase-like ATPases Sdiek1_1011 SM00382 ATPases associated with a variety of cellular activities Sdiek1_1011 SM00448 cheY-homologous receiver domain Sdiek1_1012 SM00382 ATPases associated with a variety of cellular activities Sdiek1_1020 SM00382 ATPases associated with a variety of cellular activities Sdiek1_1029 SM00226 Low molecular weight phosphatase family Sdiek1_1030 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Sdiek1_1033 SM00382 ATPases associated with a variety of cellular activities Sdiek1_1034 SM00226 Low molecular weight phosphatase family Sdiek1_1037 SM00450 Rhodanese Homology Domain Sdiek1_1044 SM00450 Rhodanese Homology Domain Sdiek1_1050 SM00857 Resolvase, N terminal domain Sdiek1_1055 SM00382 ATPases associated with a variety of cellular activities Sdiek1_1057 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdiek1_1077 SM00448 cheY-homologous receiver domain Sdiek1_1077 SM00862 Transcriptional regulatory protein, C terminal Sdiek1_1078 SM00387 Histidine kinase-like ATPases Sdiek1_1084 SM00671 Sel1-like repeats. Sdiek1_1088 SM00382 ATPases associated with a variety of cellular activities Sdiek1_1092 SM00052 Putative diguanylate phosphodiesterase Sdiek1_1092 SM00267 diguanylate cyclase Sdiek1_1092 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Sdiek1_1093 SM00052 Putative diguanylate phosphodiesterase Sdiek1_1094 SM00267 diguanylate cyclase Sdiek1_1095 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdiek1_1096 SM00448 cheY-homologous receiver domain Sdiek1_1096 SM00862 Transcriptional regulatory protein, C terminal Sdiek1_1098 SM00387 Histidine kinase-like ATPases Sdiek1_1099 SM00448 cheY-homologous receiver domain Sdiek1_1099 SM00862 Transcriptional regulatory protein, C terminal Sdiek1_1104 SM00382 ATPases associated with a variety of cellular activities Sdiek1_1106 SM00421 helix_turn_helix, Lux Regulon Sdiek1_1107 SM00112 Cadherin repeats. Sdiek1_1107 SM00327 von Willebrand factor (vWF) type A domain Sdiek1_1110 SM00052 Putative diguanylate phosphodiesterase Sdiek1_1110 SM00267 diguanylate cyclase Sdiek1_1111 SM00460 Transglutaminase/protease-like homologues Sdiek1_1113 SM00460 Transglutaminase/protease-like homologues Sdiek1_1117 SM00460 Transglutaminase/protease-like homologues Sdiek1_1125 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Sdiek1_1128 SM00342 helix_turn_helix, arabinose operon control protein Sdiek1_1129 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdiek1_1129 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Sdiek1_1159 SM00100 Cyclic nucleotide-monophosphate binding domain Sdiek1_1159 SM00116 Domain in cystathionine beta-synthase and other proteins. Sdiek1_1160 SM00479 Sdiek1_1160 Sdiek1_1168 SM00138 Methyltransferase, chemotaxis proteins Sdiek1_1186 SM00490 helicase superfamily c-terminal domain Sdiek1_1193 SM00758 Sdiek1_1193 Sdiek1_1197 SM00382 ATPases associated with a variety of cellular activities Sdiek1_1197 SM00464 Found in ATP-dependent protease La (LON) Sdiek1_1202 SM00955 Sdiek1_1202 Sdiek1_1213 SM00732 Likely ribonuclease with RNase H fold. Sdiek1_1220 SM00382 ATPases associated with a variety of cellular activities Sdiek1_1221 SM00382 ATPases associated with a variety of cellular activities Sdiek1_1221 SM00962 SRP54-type protein, GTPase domain Sdiek1_1223 SM00322 K homology RNA-binding domain Sdiek1_1223 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Sdiek1_1224 SM00382 ATPases associated with a variety of cellular activities Sdiek1_1233 SM00091 PAS domain Sdiek1_1233 SM00448 cheY-homologous receiver domain Sdiek1_1234 SM00448 cheY-homologous receiver domain Sdiek1_1234 SM00862 Transcriptional regulatory protein, C terminal Sdiek1_1235 SM00052 Putative diguanylate phosphodiesterase Sdiek1_1235 SM00267 diguanylate cyclase Sdiek1_1235 SM00448 cheY-homologous receiver domain Sdiek1_1236 SM00387 Histidine kinase-like ATPases Sdiek1_1237 SM00897 FIST N domain Sdiek1_1237 SM01204 Sdiek1_1237 Sdiek1_1242 SM00318 Staphylococcal nuclease homologues Sdiek1_1249 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Sdiek1_1249 SM00388 His Kinase A (phosphoacceptor) domain Sdiek1_1251 SM00867 YceI-like domain Sdiek1_1255 SM00382 ATPases associated with a variety of cellular activities Sdiek1_1257 SM00479 Sdiek1_1257 Sdiek1_1263 SM00052 Putative diguanylate phosphodiesterase Sdiek1_1263 SM00091 PAS domain Sdiek1_1263 SM00267 diguanylate cyclase Sdiek1_1264 SM00635 Bacterial Ig-like domain 2 Sdiek1_1267 SM00530 Helix-turn-helix XRE-family like proteins Sdiek1_1274 SM00986 Uracil DNA glycosylase superfamily Sdiek1_1274 SM00987 UreE urease accessory protein, C-terminal domain Sdiek1_1275 SM00364 Leucine-rich repeats, bacterial type Sdiek1_1275 SM00369 Leucine-rich repeats, typical (most populated) subfamily Sdiek1_1278 SM00729 Elongator protein 3, MiaB family, Radical SAM Sdiek1_1279 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Sdiek1_1279 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Sdiek1_1280 SM00448 cheY-homologous receiver domain Sdiek1_1280 SM00862 Transcriptional regulatory protein, C terminal Sdiek1_1281 SM00052 Putative diguanylate phosphodiesterase Sdiek1_1281 SM00267 diguanylate cyclase Sdiek1_1281 SM00448 cheY-homologous receiver domain Sdiek1_1282 SM00091 PAS domain Sdiek1_1282 SM00387 Histidine kinase-like ATPases Sdiek1_1282 SM00388 His Kinase A (phosphoacceptor) domain Sdiek1_1283 SM00448 cheY-homologous receiver domain Sdiek1_1284 SM00849 Metallo-beta-lactamase superfamily Sdiek1_1293 SM00862 Transcriptional regulatory protein, C terminal Sdiek1_1295 SM00260 Two component signalling adaptor domain Sdiek1_1311 SM00052 Putative diguanylate phosphodiesterase Sdiek1_1316 SM00880 Sdiek1_1316 Sdiek1_1331 SM00267 diguanylate cyclase Sdiek1_1333 SM00342 helix_turn_helix, arabinose operon control protein Sdiek1_1334 SM00871 Bacterial transcription activator, effector binding domain Sdiek1_1338 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdiek1_1338 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Sdiek1_1346 SM00387 Histidine kinase-like ATPases Sdiek1_1346 SM00388 His Kinase A (phosphoacceptor) domain Sdiek1_1347 SM00448 cheY-homologous receiver domain Sdiek1_1347 SM00862 Transcriptional regulatory protein, C terminal Sdiek1_1353 SM00749 bacterial OsmY and nodulation domain Sdiek1_1355 SM00028 Tetratricopeptide repeats Sdiek1_1357 SM00448 cheY-homologous receiver domain Sdiek1_1357 SM00862 Transcriptional regulatory protein, C terminal Sdiek1_1358 SM00897 FIST N domain Sdiek1_1358 SM01204 Sdiek1_1358 Sdiek1_1359 SM00387 Histidine kinase-like ATPases Sdiek1_1374 SM00347 helix_turn_helix multiple antibiotic resistance protein Sdiek1_1385 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Sdiek1_1385 SM00382 ATPases associated with a variety of cellular activities Sdiek1_1393 SM00052 Putative diguanylate phosphodiesterase Sdiek1_1393 SM00091 PAS domain Sdiek1_1393 SM00267 diguanylate cyclase Sdiek1_1393 SM01049 Sdiek1_1393 Sdiek1_1394 SM00530 Helix-turn-helix XRE-family like proteins Sdiek1_1395 SM00267 diguanylate cyclase Sdiek1_1400 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdiek1_1403 SM00382 ATPases associated with a variety of cellular activities Sdiek1_1417 SM00507 HNH nucleases Sdiek1_1446 SM00845 GatB domain Sdiek1_1462 SM00729 Elongator protein 3, MiaB family, Radical SAM Sdiek1_1489 SM00881 CoA binding domain Sdiek1_1495 SM00912 haemagglutination activity domain Sdiek1_1497 SM00448 cheY-homologous receiver domain Sdiek1_1497 SM00862 Transcriptional regulatory protein, C terminal Sdiek1_1503 SM00248 ankyrin repeats Sdiek1_1506 SM00382 ATPases associated with a variety of cellular activities Sdiek1_1512 SM00062 Bacterial periplasmic substrate-binding proteins Sdiek1_1512 SM00267 diguanylate cyclase Sdiek1_1514 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Sdiek1_1517 SM01130 Sdiek1_1517 Sdiek1_1520 SM00382 ATPases associated with a variety of cellular activities Sdiek1_1524 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Sdiek1_1536 SM00382 ATPases associated with a variety of cellular activities Sdiek1_1538 SM00382 ATPases associated with a variety of cellular activities Sdiek1_1547 SM00382 ATPases associated with a variety of cellular activities Sdiek1_1547 SM01086 C-terminal, D2-small domain, of ClpB protein Sdiek1_1550 SM00450 Rhodanese Homology Domain Sdiek1_1552 SM00363 S4 RNA-binding domain Sdiek1_1555 SM00382 ATPases associated with a variety of cellular activities Sdiek1_1557 SM00271 DnaJ molecular chaperone homology domain Sdiek1_1571 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Sdiek1_1574 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdiek1_1574 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Sdiek1_1575 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Sdiek1_1578 SM00387 Histidine kinase-like ATPases Sdiek1_1579 SM00448 cheY-homologous receiver domain Sdiek1_1579 SM00862 Transcriptional regulatory protein, C terminal Sdiek1_1590 SM00387 Histidine kinase-like ATPases Sdiek1_1590 SM00388 His Kinase A (phosphoacceptor) domain Sdiek1_1591 SM00448 cheY-homologous receiver domain Sdiek1_1591 SM00862 Transcriptional regulatory protein, C terminal Sdiek1_1594 SM00387 Histidine kinase-like ATPases Sdiek1_1595 SM00448 cheY-homologous receiver domain Sdiek1_1595 SM00862 Transcriptional regulatory protein, C terminal Sdiek1_1607 SM00855 Phosphoglycerate mutase family Sdiek1_1610 SM00382 ATPases associated with a variety of cellular activities Sdiek1_1622 SM00382 ATPases associated with a variety of cellular activities Sdiek1_1649 SM00411 bacterial (prokaryotic) histone like domain Sdiek1_1652 SM00382 ATPases associated with a variety of cellular activities Sdiek1_1652 SM00843 Sdiek1_1652 Sdiek1_1657 SM00342 helix_turn_helix, arabinose operon control protein Sdiek1_1660 SM00729 Elongator protein 3, MiaB family, Radical SAM Sdiek1_1663 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdiek1_1663 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Sdiek1_1664 SM00881 CoA binding domain Sdiek1_1667 SM00382 ATPases associated with a variety of cellular activities Sdiek1_1670 SM00062 Bacterial periplasmic substrate-binding proteins Sdiek1_1674 SM00382 ATPases associated with a variety of cellular activities Sdiek1_1684 SM00450 Rhodanese Homology Domain Sdiek1_1685 SM00382 ATPases associated with a variety of cellular activities Sdiek1_1703 SM00382 ATPases associated with a variety of cellular activities Sdiek1_1715 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdiek1_1715 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Sdiek1_1717 SM00852 Probable molybdopterin binding domain Sdiek1_1721 SM01001 AIR carboxylase Sdiek1_1730 SM00448 cheY-homologous receiver domain Sdiek1_1730 SM00862 Transcriptional regulatory protein, C terminal Sdiek1_1733 SM00855 Phosphoglycerate mutase family Sdiek1_1740 SM00729 Elongator protein 3, MiaB family, Radical SAM Sdiek1_1741 SM00382 ATPases associated with a variety of cellular activities Sdiek1_1752 SM00342 helix_turn_helix, arabinose operon control protein Sdiek1_1762 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdiek1_1762 SM00897 FIST N domain Sdiek1_1762 SM01204 Sdiek1_1762 Sdiek1_1777 SM00267 diguanylate cyclase Sdiek1_1779 SM00852 Probable molybdopterin binding domain Sdiek1_1785 SM00478 endonuclease III Sdiek1_1785 SM00525 Sdiek1_1785 Sdiek1_1791 SM00849 Metallo-beta-lactamase superfamily Sdiek1_1801 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Sdiek1_1807 SM01387 Sdiek1_1807 Sdiek1_1813 SM00267 diguanylate cyclase Sdiek1_1814 SM00904 Riboflavin kinase Sdiek1_1815 SM00363 S4 RNA-binding domain Sdiek1_1816 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Sdiek1_1816 SM00292 breast cancer carboxy-terminal domain Sdiek1_1816 SM00532 Ligase N family Sdiek1_1824 SM00729 Elongator protein 3, MiaB family, Radical SAM Sdiek1_1826 SM00422 helix_turn_helix, mercury resistance Sdiek1_1827 SM00271 DnaJ molecular chaperone homology domain Sdiek1_1829 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Sdiek1_1830 SM00448 cheY-homologous receiver domain Sdiek1_1830 SM00862 Transcriptional regulatory protein, C terminal Sdiek1_1831 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Sdiek1_1831 SM00387 Histidine kinase-like ATPases Sdiek1_1831 SM00388 His Kinase A (phosphoacceptor) domain Sdiek1_1834 SM00957 SecA DEAD-like domain Sdiek1_1834 SM00958 SecA preprotein cross-linking domain Sdiek1_1836 SM00052 Putative diguanylate phosphodiesterase Sdiek1_1836 SM00267 diguanylate cyclase Sdiek1_1839 SM01245 Sdiek1_1839 Sdiek1_1841 SM01234 Sdiek1_1841 Sdiek1_1851 SM00382 ATPases associated with a variety of cellular activities Sdiek1_1851 SM01086 C-terminal, D2-small domain, of ClpB protein Sdiek1_1852 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Sdiek1_1852 SM00245 tail specific protease Sdiek1_1855 SM01211 Sdiek1_1855 Sdiek1_1857 SM00563 Phosphate acyltransferases Sdiek1_1858 SM00387 Histidine kinase-like ATPases Sdiek1_1861 SM00450 Rhodanese Homology Domain Sdiek1_1876 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Sdiek1_1882 SM00842 Cell division protein FtsA Sdiek1_1883 SM00864 Tubulin/FtsZ family, GTPase domain Sdiek1_1883 SM00865 Tubulin/FtsZ family, C-terminal domain Sdiek1_1888 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdiek1_1889 SM00382 ATPases associated with a variety of cellular activities Sdiek1_1890 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdiek1_1890 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Sdiek1_1895 SM00798 AICARFT/IMPCHase bienzyme Sdiek1_1895 SM00851 MGS-like domain Sdiek1_1899 SM00271 DnaJ molecular chaperone homology domain Sdiek1_1908 SM00052 Putative diguanylate phosphodiesterase Sdiek1_1908 SM00267 diguanylate cyclase Sdiek1_1909 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Sdiek1_1909 SM00091 PAS domain Sdiek1_1919 SM00448 cheY-homologous receiver domain Sdiek1_1919 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Sdiek1_1920 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Sdiek1_1920 SM00387 Histidine kinase-like ATPases Sdiek1_1920 SM00388 His Kinase A (phosphoacceptor) domain Sdiek1_1920 SM00448 cheY-homologous receiver domain Sdiek1_1921 SM00849 Metallo-beta-lactamase superfamily Sdiek1_1921 SM01027 Beta-Casp domain Sdiek1_1929 SM00855 Phosphoglycerate mutase family Sdiek1_1934 SM00729 Elongator protein 3, MiaB family, Radical SAM Sdiek1_1939 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Sdiek1_1940 SM00387 Histidine kinase-like ATPases Sdiek1_1940 SM00388 His Kinase A (phosphoacceptor) domain Sdiek1_1940 SM00897 FIST N domain Sdiek1_1940 SM01204 Sdiek1_1940 Sdiek1_1941 SM00448 cheY-homologous receiver domain Sdiek1_1941 SM00862 Transcriptional regulatory protein, C terminal Sdiek1_1951 SM01018 B12 binding domain Sdiek1_1954 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdiek1_1957 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdiek1_1957 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Sdiek1_1960 SM00938 Nitrogen regulatory protein P-II Sdiek1_1962 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Sdiek1_1963 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Sdiek1_1967 SM00947 Carbonic anhydrase Sdiek1_1969 SM00052 Putative diguanylate phosphodiesterase Sdiek1_1969 SM00091 PAS domain Sdiek1_1969 SM00267 diguanylate cyclase Sdiek1_1969 SM01079 Sdiek1_1969 Sdiek1_1977 SM01329 Sdiek1_1977 Sdiek1_1979 SM00382 ATPases associated with a variety of cellular activities Sdiek1_1982 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Sdiek1_1986 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Sdiek1_1986 SM00091 PAS domain Sdiek1_1987 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdiek1_1993 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdiek1_1994 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdiek1_1995 SM00342 helix_turn_helix, arabinose operon control protein Sdiek1_1999 SM00267 diguanylate cyclase Sdiek1_2002 SM00341 Helicase and RNase D C-terminal Sdiek1_2002 SM00487 DEAD-like helicases superfamily Sdiek1_2002 SM00490 helicase superfamily c-terminal domain Sdiek1_2002 SM00956 Sdiek1_2002 Sdiek1_2008 SM00487 DEAD-like helicases superfamily Sdiek1_2008 SM00490 helicase superfamily c-terminal domain Sdiek1_2011 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Sdiek1_2011 SM00387 Histidine kinase-like ATPases Sdiek1_2011 SM00388 His Kinase A (phosphoacceptor) domain Sdiek1_2012 SM00448 cheY-homologous receiver domain Sdiek1_2012 SM00862 Transcriptional regulatory protein, C terminal Sdiek1_2034 SM00382 ATPases associated with a variety of cellular activities Sdiek1_2041 SM00448 cheY-homologous receiver domain Sdiek1_2041 SM00862 Transcriptional regulatory protein, C terminal Sdiek1_2042 SM00387 Histidine kinase-like ATPases Sdiek1_2042 SM00388 His Kinase A (phosphoacceptor) domain Sdiek1_2046 SM00899 Sdiek1_2046 Sdiek1_2061 SM00487 DEAD-like helicases superfamily Sdiek1_2061 SM00490 helicase superfamily c-terminal domain Sdiek1_2066 SM00487 DEAD-like helicases superfamily Sdiek1_2066 SM00490 helicase superfamily c-terminal domain Sdiek1_2070 SM00479 Sdiek1_2070 Sdiek1_2076 SM00478 endonuclease III Sdiek1_2078 SM00487 DEAD-like helicases superfamily Sdiek1_2078 SM00490 helicase superfamily c-terminal domain Sdiek1_2078 SM00982 Sdiek1_2078 Sdiek1_2078 SM01058 CarD-like/TRCF domain Sdiek1_2082 SM00267 diguanylate cyclase Sdiek1_2087 SM01323 Sdiek1_2087 Sdiek1_2092 SM00382 ATPases associated with a variety of cellular activities Sdiek1_2092 SM01086 C-terminal, D2-small domain, of ClpB protein Sdiek1_2109 SM00342 helix_turn_helix, arabinose operon control protein Sdiek1_2109 SM00871 Bacterial transcription activator, effector binding domain Sdiek1_2116 SM00382 ATPases associated with a variety of cellular activities Sdiek1_2116 SM00962 SRP54-type protein, GTPase domain Sdiek1_2116 SM00963 SRP54-type protein, helical bundle domain Sdiek1_2123 SM01001 AIR carboxylase Sdiek1_2127 SM01230 Sdiek1_2127 Sdiek1_2129 SM00382 ATPases associated with a variety of cellular activities Sdiek1_2133 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Sdiek1_2163 SM00563 Phosphate acyltransferases Sdiek1_2164 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Sdiek1_2170 SM00764 Citrate lyase ligase C-terminal domain Sdiek1_2180 SM00267 diguanylate cyclase Sdiek1_2190 SM00382 ATPases associated with a variety of cellular activities Sdiek1_2203 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain Sdiek1_2207 SM00267 diguanylate cyclase Sdiek1_2212 SM00448 cheY-homologous receiver domain Sdiek1_2216 SM00867 YceI-like domain Sdiek1_2221 SM00382 ATPases associated with a variety of cellular activities Sdiek1_2229 SM00382 ATPases associated with a variety of cellular activities Sdiek1_2235 SM00897 FIST N domain Sdiek1_2236 SM00052 Putative diguanylate phosphodiesterase Sdiek1_2236 SM00267 diguanylate cyclase Sdiek1_2236 SM01204 Sdiek1_2236 Sdiek1_2241 SM00671 Sel1-like repeats. Sdiek1_2242 SM00342 helix_turn_helix, arabinose operon control protein Sdiek1_2243 SM00912 haemagglutination activity domain Sdiek1_2269 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family Sdiek1_2280 SM00028 Tetratricopeptide repeats Sdiek1_2281 SM00917 LeuA allosteric (dimerisation) domain Sdiek1_2284 SM00382 ATPases associated with a variety of cellular activities Sdiek1_2286 SM00448 cheY-homologous receiver domain Sdiek1_2323 SM00028 Tetratricopeptide repeats Sdiek1_2328 SM00052 Putative diguanylate phosphodiesterase Sdiek1_2330 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Sdiek1_2332 SM00267 diguanylate cyclase Sdiek1_2337 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdiek1_2337 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Sdiek1_2338 SM00797 Allophanate hydrolase subunit 2 Sdiek1_2339 SM00796 Allophanate hydrolase subunit 1 Sdiek1_2341 SM01228 Sdiek1_2341 Sdiek1_2347 SM00825 Beta-ketoacyl synthase Sdiek1_2348 SM00823 Phosphopantetheine attachment site Sdiek1_2349 SM00822 Sdiek1_2349 Sdiek1_2367 SM01007 Class II Aldolase and Adducin N-terminal domain Sdiek1_2376 SM00382 ATPases associated with a variety of cellular activities Sdiek1_2381 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Sdiek1_2384 SM00387 Histidine kinase-like ATPases Sdiek1_2385 SM00448 cheY-homologous receiver domain Sdiek1_2385 SM00862 Transcriptional regulatory protein, C terminal Sdiek1_2389 SM00052 Putative diguanylate phosphodiesterase Sdiek1_2389 SM00267 diguanylate cyclase Sdiek1_2394 SM00878 Biotin carboxylase C-terminal domain Sdiek1_2397 SM00487 DEAD-like helicases superfamily Sdiek1_2397 SM00490 helicase superfamily c-terminal domain Sdiek1_2401 SM00342 helix_turn_helix, arabinose operon control protein Sdiek1_2407 SM00382 ATPases associated with a variety of cellular activities Sdiek1_2408 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdiek1_2410 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdiek1_2411 SM00563 Phosphate acyltransferases Sdiek1_2413 SM00448 cheY-homologous receiver domain Sdiek1_2413 SM00862 Transcriptional regulatory protein, C terminal Sdiek1_2414 SM00387 Histidine kinase-like ATPases Sdiek1_2414 SM00388 His Kinase A (phosphoacceptor) domain Sdiek1_2422 SM00387 Histidine kinase-like ATPases Sdiek1_2431 SM00670 Large family of predicted nucleotide-binding domains Sdiek1_2432 SM00342 helix_turn_helix, arabinose operon control protein Sdiek1_2439 SM00450 Rhodanese Homology Domain Sdiek1_2447 SM00890 Domain of unknown function Sdiek1_2455 SM00342 helix_turn_helix, arabinose operon control protein Sdiek1_2480 SM00448 cheY-homologous receiver domain Sdiek1_2480 SM00862 Transcriptional regulatory protein, C terminal Sdiek1_2481 SM00387 Histidine kinase-like ATPases Sdiek1_2482 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Sdiek1_2483 SM00091 PAS domain Sdiek1_2485 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain Sdiek1_2489 SM00788 Adenylosuccinate synthetase Sdiek1_2492 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdiek1_2492 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Sdiek1_2494 SM00861 Transketolase, pyrimidine binding domain Sdiek1_2496 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Sdiek1_2504 SM00662 RNA polymerases D Sdiek1_2505 SM00363 S4 RNA-binding domain Sdiek1_2505 SM01390 Sdiek1_2505 Sdiek1_2517 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. Sdiek1_2518 SM01374 Sdiek1_2518 Sdiek1_2522 SM00322 K homology RNA-binding domain Sdiek1_2525 SM01382 Sdiek1_2525 Sdiek1_2525 SM01383 Sdiek1_2525 Sdiek1_2529 SM01403 Sdiek1_2529 Sdiek1_2534 SM00899 Sdiek1_2534 Sdiek1_2537 SM00358 Double-stranded RNA binding motif Sdiek1_2537 SM00535 Ribonuclease III family Sdiek1_2540 SM00400 zinc finger Sdiek1_2540 SM00493 Sdiek1_2540 Sdiek1_2542 SM00448 cheY-homologous receiver domain Sdiek1_2544 SM00267 diguanylate cyclase Sdiek1_2545 SM00448 cheY-homologous receiver domain Sdiek1_2546 SM00091 PAS domain Sdiek1_2546 SM00387 Histidine kinase-like ATPases Sdiek1_2547 SM00448 cheY-homologous receiver domain Sdiek1_2549 SM00387 Histidine kinase-like ATPases Sdiek1_2550 SM00138 Methyltransferase, chemotaxis proteins Sdiek1_2551 SM00073 Histidine Phosphotransfer domain Sdiek1_2551 SM00260 Two component signalling adaptor domain Sdiek1_2551 SM00387 Histidine kinase-like ATPases Sdiek1_2551 SM01231 Sdiek1_2551 Sdiek1_2553 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdiek1_2554 SM00260 Two component signalling adaptor domain Sdiek1_2555 SM00448 cheY-homologous receiver domain Sdiek1_2557 SM00271 DnaJ molecular chaperone homology domain Sdiek1_2571 SM00382 ATPases associated with a variety of cellular activities Sdiek1_2576 SM00267 diguanylate cyclase Sdiek1_2578 SM00448 cheY-homologous receiver domain Sdiek1_2578 SM00862 Transcriptional regulatory protein, C terminal Sdiek1_2579 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Sdiek1_2579 SM00387 Histidine kinase-like ATPases Sdiek1_2579 SM00388 His Kinase A (phosphoacceptor) domain Sdiek1_2581 SM00986 Uracil DNA glycosylase superfamily Sdiek1_2581 SM00987 UreE urease accessory protein, C-terminal domain Sdiek1_2582 SM00052 Putative diguanylate phosphodiesterase Sdiek1_2584 SM00054 EF-hand, calcium binding motif Sdiek1_2586 SM00903 Flavin reductase like domain Sdiek1_2594 SM00870 Sdiek1_2594 Sdiek1_2595 SM00387 Histidine kinase-like ATPases Sdiek1_2596 SM00448 cheY-homologous receiver domain Sdiek1_2596 SM00862 Transcriptional regulatory protein, C terminal Sdiek1_2601 SM00327 von Willebrand factor (vWF) type A domain Sdiek1_2602 SM00327 von Willebrand factor (vWF) type A domain Sdiek1_2603 SM00028 Tetratricopeptide repeats Sdiek1_2609 SM00062 Bacterial periplasmic substrate-binding proteins Sdiek1_2609 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. Sdiek1_2624 SM00831 Cation transporter/ATPase, N-terminus Sdiek1_2635 SM00062 Bacterial periplasmic substrate-binding proteins Sdiek1_2637 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Sdiek1_2637 SM00091 PAS domain Sdiek1_2637 SM00267 diguanylate cyclase Sdiek1_2638 SM00347 helix_turn_helix multiple antibiotic resistance protein Sdiek1_2643 SM00382 ATPases associated with a variety of cellular activities Sdiek1_2655 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Sdiek1_2658 SM00382 ATPases associated with a variety of cellular activities Sdiek1_2672 SM00382 ATPases associated with a variety of cellular activities Sdiek1_2678 SM00342 helix_turn_helix, arabinose operon control protein Sdiek1_2683 SM00342 helix_turn_helix, arabinose operon control protein Sdiek1_2691 SM00387 Histidine kinase-like ATPases Sdiek1_2692 SM00448 cheY-homologous receiver domain Sdiek1_2696 SM00347 helix_turn_helix multiple antibiotic resistance protein Sdiek1_2697 SM00867 YceI-like domain Sdiek1_2699 SM00704 CDGSH-type zinc finger. Function unknown. Sdiek1_2704 SM00091 PAS domain Sdiek1_2705 SM00448 cheY-homologous receiver domain Sdiek1_2705 SM00862 Transcriptional regulatory protein, C terminal Sdiek1_2706 SM00388 His Kinase A (phosphoacceptor) domain Sdiek1_2722 SM00825 Beta-ketoacyl synthase Sdiek1_2724 SM00487 DEAD-like helicases superfamily Sdiek1_2724 SM00490 helicase superfamily c-terminal domain Sdiek1_2730 SM00460 Transglutaminase/protease-like homologues Sdiek1_2733 SM00448 cheY-homologous receiver domain Sdiek1_2737 SM00796 Allophanate hydrolase subunit 1 Sdiek1_2737 SM00797 Allophanate hydrolase subunit 2 Sdiek1_2738 SM00797 Allophanate hydrolase subunit 2 Sdiek1_2738 SM00878 Biotin carboxylase C-terminal domain Sdiek1_2741 SM00382 ATPases associated with a variety of cellular activities Sdiek1_2744 SM00387 Histidine kinase-like ATPases Sdiek1_2745 SM00448 cheY-homologous receiver domain Sdiek1_2745 SM00862 Transcriptional regulatory protein, C terminal Sdiek1_2746 SM00054 EF-hand, calcium binding motif Sdiek1_2747 SM00448 cheY-homologous receiver domain Sdiek1_2748 SM00387 Histidine kinase-like ATPases Sdiek1_2748 SM00388 His Kinase A (phosphoacceptor) domain Sdiek1_2753 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdiek1_2753 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Sdiek1_2753 SM01049 Sdiek1_2753 Sdiek1_2758 SM00925 MltA specific insert domain Sdiek1_2766 SM00852 Probable molybdopterin binding domain Sdiek1_2771 SM00382 ATPases associated with a variety of cellular activities Sdiek1_2775 SM00267 diguanylate cyclase Sdiek1_2790 SM00448 cheY-homologous receiver domain Sdiek1_2790 SM00862 Transcriptional regulatory protein, C terminal Sdiek1_2791 SM00387 Histidine kinase-like ATPases Sdiek1_2810 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdiek1_2811 SM00316 Ribosomal protein S1-like RNA-binding domain Sdiek1_2811 SM00732 Likely ribonuclease with RNase H fold. Sdiek1_2812 SM00052 Putative diguanylate phosphodiesterase Sdiek1_2813 SM00091 PAS domain Sdiek1_2813 SM00267 diguanylate cyclase Sdiek1_2814 SM00091 PAS domain Sdiek1_2814 SM00138 Methyltransferase, chemotaxis proteins Sdiek1_2816 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdiek1_2816 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Sdiek1_2819 SM00382 ATPases associated with a variety of cellular activities Sdiek1_2830 SM00382 ATPases associated with a variety of cellular activities Sdiek1_2831 SM00954 Region found in RelA / SpoT proteins Sdiek1_2834 SM01144 Sdiek1_2834 Sdiek1_2842 SM00347 helix_turn_helix multiple antibiotic resistance protein Sdiek1_2850 SM00506 Appr-1"-p processing enzyme Sdiek1_2851 SM00052 Putative diguanylate phosphodiesterase Sdiek1_2851 SM00267 diguanylate cyclase Sdiek1_2853 SM00448 cheY-homologous receiver domain Sdiek1_2853 SM00862 Transcriptional regulatory protein, C terminal Sdiek1_2854 SM00387 Histidine kinase-like ATPases Sdiek1_2854 SM00388 His Kinase A (phosphoacceptor) domain Sdiek1_2855 SM00382 ATPases associated with a variety of cellular activities Sdiek1_2865 SM00232 JAB/MPN domain Sdiek1_2873 SM00450 Rhodanese Homology Domain Sdiek1_2874 SM00267 diguanylate cyclase Sdiek1_2876 SM00226 Low molecular weight phosphatase family Sdiek1_2880 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Sdiek1_2882 SM00919 Malic enzyme, NAD binding domain Sdiek1_2882 SM01274 Sdiek1_2882 Sdiek1_2885 SM00878 Biotin carboxylase C-terminal domain Sdiek1_2892 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase Sdiek1_2901 SM00858 Sdiek1_2901 Sdiek1_2911 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain Sdiek1_2911 SM00437 Bacterial DNA topoisomerase I DNA-binding domain Sdiek1_2911 SM00493 Sdiek1_2911 Sdiek1_2912 SM00729 Elongator protein 3, MiaB family, Radical SAM Sdiek1_2912 SM00876 Biotin and Thiamin Synthesis associated domain Sdiek1_2917 SM01192 Sdiek1_2917 Sdiek1_2917 SM01193 Sdiek1_2917 Sdiek1_2918 SM00382 ATPases associated with a variety of cellular activities Sdiek1_2926 SM00052 Putative diguanylate phosphodiesterase Sdiek1_2926 SM00267 diguanylate cyclase Sdiek1_2926 SM01049 Sdiek1_2926 Sdiek1_2941 SM00419 helix_turn_helix, cAMP Regulatory protein Sdiek1_2945 SM00052 Putative diguanylate phosphodiesterase Sdiek1_2945 SM00267 diguanylate cyclase Sdiek1_2947 SM00886 Stress responsive A/B Barrel Domain Sdiek1_2950 SM00360 RNA recognition motif Sdiek1_2970 SM00450 Rhodanese Homology Domain Sdiek1_2971 SM00450 Rhodanese Homology Domain Sdiek1_2974 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Sdiek1_2978 SM00450 Rhodanese Homology Domain Sdiek1_2981 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Sdiek1_2984 SM00028 Tetratricopeptide repeats Sdiek1_2985 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain Sdiek1_2985 SM01080 Sdiek1_2985 Sdiek1_2986 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Sdiek1_2986 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Sdiek1_2996 SM00838 Elongation factor G C-terminus