YH65_05590 6fc17d5aabf8441c48f479987094aff3 143 Pfam PF06426 Serine acetyltransferase, N-terminal 17 101 1.6E-4 T 11-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 YH65_10655 9c00f394926066400f9e65eef66f8886 420 Hamap MF_01465 Protein translocase subunit SecY [secY]. 1 416 26.587 T 11-10-2018 IPR026593 Protein translocase subunit SecY YH65_10655 9c00f394926066400f9e65eef66f8886 420 Pfam PF00344 SecY translocase 62 400 2.5E-97 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 YH65_10655 9c00f394926066400f9e65eef66f8886 420 Gene3D G3DSA:1.10.3370.10 2 412 1.3E-137 T 11-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 YH65_10655 9c00f394926066400f9e65eef66f8886 420 PIRSF PIRSF004557 2 419 7.5E-117 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 YH65_10655 9c00f394926066400f9e65eef66f8886 420 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 7 410 4.1E-105 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 YH65_10655 9c00f394926066400f9e65eef66f8886 420 ProSitePatterns PS00755 Protein secY signature 1. 62 81 - T 11-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 YH65_10655 9c00f394926066400f9e65eef66f8886 420 SUPERFAMILY SSF103491 5 406 1.31E-109 T 11-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 YH65_10655 9c00f394926066400f9e65eef66f8886 420 ProSitePatterns PS00756 Protein secY signature 2. 160 177 - T 11-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 YH65_10655 9c00f394926066400f9e65eef66f8886 420 PRINTS PR00303 Preprotein translocase SecY subunit signature 61 81 5.0E-83 T 11-10-2018 YH65_10655 9c00f394926066400f9e65eef66f8886 420 PRINTS PR00303 Preprotein translocase SecY subunit signature 167 190 5.0E-83 T 11-10-2018 YH65_10655 9c00f394926066400f9e65eef66f8886 420 PRINTS PR00303 Preprotein translocase SecY subunit signature 9 27 5.0E-83 T 11-10-2018 YH65_10655 9c00f394926066400f9e65eef66f8886 420 PRINTS PR00303 Preprotein translocase SecY subunit signature 353 371 5.0E-83 T 11-10-2018 YH65_10655 9c00f394926066400f9e65eef66f8886 420 PRINTS PR00303 Preprotein translocase SecY subunit signature 298 320 5.0E-83 T 11-10-2018 YH65_10655 9c00f394926066400f9e65eef66f8886 420 PRINTS PR00303 Preprotein translocase SecY subunit signature 141 166 5.0E-83 T 11-10-2018 YH65_10655 9c00f394926066400f9e65eef66f8886 420 PRINTS PR00303 Preprotein translocase SecY subunit signature 101 124 5.0E-83 T 11-10-2018 YH65_10655 9c00f394926066400f9e65eef66f8886 420 PRINTS PR00303 Preprotein translocase SecY subunit signature 385 403 5.0E-83 T 11-10-2018 YH65_10655 9c00f394926066400f9e65eef66f8886 420 PRINTS PR00303 Preprotein translocase SecY subunit signature 259 278 5.0E-83 T 11-10-2018 YH65_02700 0dd7ca260a7c4366ee977cc07c837ea1 218 TIGRFAM TIGR00319 desulf_FeS4: desulfoferrodoxin FeS4 iron-binding domain 3 33 9.5E-13 T 11-10-2018 IPR004462 Desulforodoxin domain GO:0005506 YH65_02700 0dd7ca260a7c4366ee977cc07c837ea1 218 Gene3D G3DSA:2.20.28.100 1 35 4.3E-11 T 11-10-2018 IPR038094 Desulforodoxin domain superfamily YH65_02700 0dd7ca260a7c4366ee977cc07c837ea1 218 Pfam PF06397 Desulfoferrodoxin, N-terminal domain 3 35 9.2E-13 T 11-10-2018 IPR004462 Desulforodoxin domain GO:0005506 YH65_02700 0dd7ca260a7c4366ee977cc07c837ea1 218 Gene3D G3DSA:1.20.1260.10 36 173 2.0E-44 T 11-10-2018 IPR012347 Ferritin-like YH65_02700 0dd7ca260a7c4366ee977cc07c837ea1 218 SUPERFAMILY SSF57802 177 213 7.25E-11 T 11-10-2018 YH65_02700 0dd7ca260a7c4366ee977cc07c837ea1 218 SUPERFAMILY SSF47240 41 172 4.06E-35 T 11-10-2018 IPR009078 Ferritin-like superfamily YH65_02700 0dd7ca260a7c4366ee977cc07c837ea1 218 Gene3D G3DSA:2.20.28.10 175 216 4.1E-15 T 11-10-2018 YH65_02700 0dd7ca260a7c4366ee977cc07c837ea1 218 SUPERFAMILY SSF57802 2 36 7.14E-11 T 11-10-2018 YH65_02700 0dd7ca260a7c4366ee977cc07c837ea1 218 Pfam PF02915 Rubrerythrin 44 166 4.8E-27 T 11-10-2018 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 YH65_07675 e030c85fb80f310ea95a5cecb2cb9eb0 317 Pfam PF07731 Multicopper oxidase 204 293 5.2E-8 T 11-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 YH65_07675 e030c85fb80f310ea95a5cecb2cb9eb0 317 SUPERFAMILY SSF49503 26 182 9.06E-20 T 11-10-2018 IPR008972 Cupredoxin YH65_07675 e030c85fb80f310ea95a5cecb2cb9eb0 317 Gene3D G3DSA:2.60.40.420 21 304 1.4E-48 T 11-10-2018 IPR008972 Cupredoxin YH65_07675 e030c85fb80f310ea95a5cecb2cb9eb0 317 Pfam PF07732 Multicopper oxidase 72 152 3.7E-10 T 11-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 YH65_07675 e030c85fb80f310ea95a5cecb2cb9eb0 317 SUPERFAMILY SSF49503 141 293 1.07E-19 T 11-10-2018 IPR008972 Cupredoxin YH65_01260 ce766c6668ee9215201b3da09a0098b8 771 Gene3D G3DSA:3.40.50.670 654 770 8.3E-26 T 11-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 YH65_01260 ce766c6668ee9215201b3da09a0098b8 771 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 1 771 92.049 T 11-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YH65_01260 ce766c6668ee9215201b3da09a0098b8 771 Gene3D G3DSA:3.30.565.10 1 217 2.8E-90 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YH65_01260 ce766c6668ee9215201b3da09a0098b8 771 Gene3D G3DSA:3.40.50.670 395 596 1.8E-74 T 11-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 YH65_01260 ce766c6668ee9215201b3da09a0098b8 771 SMART SM00387 29 173 7.1E-22 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YH65_01260 ce766c6668ee9215201b3da09a0098b8 771 SUPERFAMILY SSF54211 219 387 2.28E-50 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold YH65_01260 ce766c6668ee9215201b3da09a0098b8 771 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 4 771 4.9E-287 T 11-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YH65_01260 ce766c6668ee9215201b3da09a0098b8 771 PRINTS PR01159 DNA gyrase subunit B signature 4 14 2.9E-56 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 YH65_01260 ce766c6668ee9215201b3da09a0098b8 771 PRINTS PR01159 DNA gyrase subunit B signature 238 256 2.9E-56 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 YH65_01260 ce766c6668ee9215201b3da09a0098b8 771 PRINTS PR01159 DNA gyrase subunit B signature 724 736 2.9E-56 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 YH65_01260 ce766c6668ee9215201b3da09a0098b8 771 PRINTS PR01159 DNA gyrase subunit B signature 740 756 2.9E-56 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 YH65_01260 ce766c6668ee9215201b3da09a0098b8 771 PRINTS PR01159 DNA gyrase subunit B signature 179 194 2.9E-56 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 YH65_01260 ce766c6668ee9215201b3da09a0098b8 771 PRINTS PR01159 DNA gyrase subunit B signature 356 370 2.9E-56 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 YH65_01260 ce766c6668ee9215201b3da09a0098b8 771 PRINTS PR01159 DNA gyrase subunit B signature 466 475 2.9E-56 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 YH65_01260 ce766c6668ee9215201b3da09a0098b8 771 PRINTS PR01159 DNA gyrase subunit B signature 308 324 2.9E-56 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 YH65_01260 ce766c6668ee9215201b3da09a0098b8 771 PRINTS PR01159 DNA gyrase subunit B signature 370 390 2.9E-56 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 YH65_01260 ce766c6668ee9215201b3da09a0098b8 771 PRINTS PR01159 DNA gyrase subunit B signature 194 207 2.9E-56 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 YH65_01260 ce766c6668ee9215201b3da09a0098b8 771 PRINTS PR00418 DNA topoisomerase II family signature 33 48 1.4E-69 T 11-10-2018 YH65_01260 ce766c6668ee9215201b3da09a0098b8 771 PRINTS PR00418 DNA topoisomerase II family signature 703 719 1.4E-69 T 11-10-2018 YH65_01260 ce766c6668ee9215201b3da09a0098b8 771 PRINTS PR00418 DNA topoisomerase II family signature 68 81 1.4E-69 T 11-10-2018 YH65_01260 ce766c6668ee9215201b3da09a0098b8 771 PRINTS PR00418 DNA topoisomerase II family signature 416 430 1.4E-69 T 11-10-2018 YH65_01260 ce766c6668ee9215201b3da09a0098b8 771 PRINTS PR00418 DNA topoisomerase II family signature 500 517 1.4E-69 T 11-10-2018 YH65_01260 ce766c6668ee9215201b3da09a0098b8 771 PRINTS PR00418 DNA topoisomerase II family signature 111 125 1.4E-69 T 11-10-2018 YH65_01260 ce766c6668ee9215201b3da09a0098b8 771 PRINTS PR00418 DNA topoisomerase II family signature 264 277 1.4E-69 T 11-10-2018 YH65_01260 ce766c6668ee9215201b3da09a0098b8 771 PRINTS PR00418 DNA topoisomerase II family signature 520 532 1.4E-69 T 11-10-2018 YH65_01260 ce766c6668ee9215201b3da09a0098b8 771 PRINTS PR00418 DNA topoisomerase II family signature 482 498 1.4E-69 T 11-10-2018 YH65_01260 ce766c6668ee9215201b3da09a0098b8 771 SUPERFAMILY SSF56719 390 766 7.06E-85 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 YH65_01260 ce766c6668ee9215201b3da09a0098b8 771 Pfam PF00204 DNA gyrase B 219 386 5.3E-55 T 11-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 YH65_01260 ce766c6668ee9215201b3da09a0098b8 771 SMART SM00433 33 764 4.1E-266 T 11-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 YH65_01260 ce766c6668ee9215201b3da09a0098b8 771 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 31 171 4.7E-19 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YH65_01260 ce766c6668ee9215201b3da09a0098b8 771 Pfam PF01751 Toprim domain 415 515 1.4E-18 T 11-10-2018 IPR006171 TOPRIM domain YH65_01260 ce766c6668ee9215201b3da09a0098b8 771 Gene3D G3DSA:3.30.230.10 218 394 2.6E-63 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YH65_01260 ce766c6668ee9215201b3da09a0098b8 771 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 699 760 3.1E-29 T 11-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 YH65_01260 ce766c6668ee9215201b3da09a0098b8 771 SUPERFAMILY SSF55874 4 216 3.31E-66 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YH65_01260 ce766c6668ee9215201b3da09a0098b8 771 ProSitePatterns PS00177 DNA topoisomerase II signature. 418 426 - T 11-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 YH65_04850 b7d5ca985087e7a9219948db5bf6ac83 578 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 148 311 1.6E-50 T 11-10-2018 IPR000160 GGDEF domain YH65_04850 b7d5ca985087e7a9219948db5bf6ac83 578 SMART SM00267 141 313 9.4E-69 T 11-10-2018 IPR000160 GGDEF domain YH65_04850 b7d5ca985087e7a9219948db5bf6ac83 578 Pfam PF00990 Diguanylate cyclase, GGDEF domain 152 309 1.3E-53 T 11-10-2018 IPR000160 GGDEF domain YH65_04850 b7d5ca985087e7a9219948db5bf6ac83 578 Pfam PF08448 PAS fold 27 135 1.2E-7 T 11-10-2018 IPR013656 PAS fold-4 YH65_04850 b7d5ca985087e7a9219948db5bf6ac83 578 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 16 141 1.7E-6 T 11-10-2018 IPR000014 PAS domain YH65_04850 b7d5ca985087e7a9219948db5bf6ac83 578 SUPERFAMILY SSF55073 157 315 4.97E-54 T 11-10-2018 IPR029787 Nucleotide cyclase YH65_04850 b7d5ca985087e7a9219948db5bf6ac83 578 SMART SM00052 323 569 3.8E-118 T 11-10-2018 IPR001633 EAL domain YH65_04850 b7d5ca985087e7a9219948db5bf6ac83 578 Pfam PF00563 EAL domain 329 564 2.4E-71 T 11-10-2018 IPR001633 EAL domain YH65_04850 b7d5ca985087e7a9219948db5bf6ac83 578 Gene3D G3DSA:3.30.450.20 3 151 5.6E-16 T 11-10-2018 YH65_04850 b7d5ca985087e7a9219948db5bf6ac83 578 Gene3D G3DSA:3.30.70.270 152 326 4.7E-65 T 11-10-2018 YH65_04850 b7d5ca985087e7a9219948db5bf6ac83 578 SUPERFAMILY SSF55785 5 132 1.74E-16 T 11-10-2018 IPR035965 PAS domain superfamily YH65_04850 b7d5ca985087e7a9219948db5bf6ac83 578 SUPERFAMILY SSF141868 328 576 5.23E-88 T 11-10-2018 IPR035919 EAL domain superfamily YH65_04850 b7d5ca985087e7a9219948db5bf6ac83 578 Gene3D G3DSA:3.20.20.450 327 577 1.2E-96 T 11-10-2018 IPR035919 EAL domain superfamily YH65_05925 2192775419e3a4173a3222f33d8407d0 252 PIRSF PIRSF028756 1 252 6.1E-105 T 11-10-2018 IPR016898 Polyphosphate kinase 2 KEGG: 00190+2.7.4.1 YH65_05925 2192775419e3a4173a3222f33d8407d0 252 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 2 227 3.3E-104 T 11-10-2018 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 KEGG: 00190+2.7.4.1 YH65_05925 2192775419e3a4173a3222f33d8407d0 252 SUPERFAMILY SSF52540 33 218 4.51E-25 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_05925 2192775419e3a4173a3222f33d8407d0 252 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 2 226 8.2E-94 T 11-10-2018 IPR022488 Polyphosphate kinase-2-related YH65_05925 2192775419e3a4173a3222f33d8407d0 252 Gene3D G3DSA:3.40.50.300 1 245 1.0E-89 T 11-10-2018 YH65_09605 81f6649a0a3d33fc2c2248b036aa9b51 245 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 2 236 1.1E-91 T 11-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 YH65_09605 81f6649a0a3d33fc2c2248b036aa9b51 245 Gene3D G3DSA:3.30.950.10 118 245 5.0E-49 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 YH65_09605 81f6649a0a3d33fc2c2248b036aa9b51 245 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 3 214 4.0E-50 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 YH65_09605 81f6649a0a3d33fc2c2248b036aa9b51 245 Gene3D G3DSA:3.40.1010.10 1 117 9.3E-42 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 YH65_09605 81f6649a0a3d33fc2c2248b036aa9b51 245 SUPERFAMILY SSF53790 2 244 1.44E-75 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 YH65_05280 cde5946def70d5bb4ea76e574ef0b5d4 697 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 268 430 3.1E-46 T 11-10-2018 IPR000160 GGDEF domain YH65_05280 cde5946def70d5bb4ea76e574ef0b5d4 697 Pfam PF08447 PAS fold 38 126 2.6E-21 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 YH65_05280 cde5946def70d5bb4ea76e574ef0b5d4 697 SUPERFAMILY SSF141868 449 696 7.45E-85 T 11-10-2018 IPR035919 EAL domain superfamily YH65_05280 cde5946def70d5bb4ea76e574ef0b5d4 697 Gene3D G3DSA:3.20.20.450 446 696 1.0E-93 T 11-10-2018 IPR035919 EAL domain superfamily YH65_05280 cde5946def70d5bb4ea76e574ef0b5d4 697 Pfam PF00563 EAL domain 449 683 1.2E-72 T 11-10-2018 IPR001633 EAL domain YH65_05280 cde5946def70d5bb4ea76e574ef0b5d4 697 SMART SM00091 140 206 1.1E-4 T 11-10-2018 IPR000014 PAS domain YH65_05280 cde5946def70d5bb4ea76e574ef0b5d4 697 SMART SM00091 15 83 5.6E-4 T 11-10-2018 IPR000014 PAS domain YH65_05280 cde5946def70d5bb4ea76e574ef0b5d4 697 SMART SM00052 442 688 1.1E-108 T 11-10-2018 IPR001633 EAL domain YH65_05280 cde5946def70d5bb4ea76e574ef0b5d4 697 SMART SM00086 211 253 0.0015 T 11-10-2018 IPR001610 PAC motif YH65_05280 cde5946def70d5bb4ea76e574ef0b5d4 697 SMART SM00086 90 132 3.7E-10 T 11-10-2018 IPR001610 PAC motif YH65_05280 cde5946def70d5bb4ea76e574ef0b5d4 697 SMART SM00267 260 432 1.1E-66 T 11-10-2018 IPR000160 GGDEF domain YH65_05280 cde5946def70d5bb4ea76e574ef0b5d4 697 Pfam PF13426 PAS domain 152 252 4.1E-13 T 11-10-2018 IPR000014 PAS domain YH65_05280 cde5946def70d5bb4ea76e574ef0b5d4 697 Pfam PF00990 Diguanylate cyclase, GGDEF domain 271 428 3.0E-50 T 11-10-2018 IPR000160 GGDEF domain YH65_05280 cde5946def70d5bb4ea76e574ef0b5d4 697 SUPERFAMILY SSF55785 27 134 1.05E-21 T 11-10-2018 IPR035965 PAS domain superfamily YH65_05280 cde5946def70d5bb4ea76e574ef0b5d4 697 Gene3D G3DSA:3.30.450.20 138 270 2.0E-27 T 11-10-2018 YH65_05280 cde5946def70d5bb4ea76e574ef0b5d4 697 SUPERFAMILY SSF55785 151 260 7.63E-22 T 11-10-2018 IPR035965 PAS domain superfamily YH65_05280 cde5946def70d5bb4ea76e574ef0b5d4 697 Gene3D G3DSA:3.30.70.270 271 445 5.9E-63 T 11-10-2018 YH65_05280 cde5946def70d5bb4ea76e574ef0b5d4 697 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 15 136 1.3E-14 T 11-10-2018 IPR000014 PAS domain YH65_05280 cde5946def70d5bb4ea76e574ef0b5d4 697 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 144 259 6.4E-18 T 11-10-2018 IPR000014 PAS domain YH65_05280 cde5946def70d5bb4ea76e574ef0b5d4 697 Gene3D G3DSA:3.30.450.20 11 128 1.8E-27 T 11-10-2018 YH65_05280 cde5946def70d5bb4ea76e574ef0b5d4 697 SUPERFAMILY SSF55073 276 433 9.42E-51 T 11-10-2018 IPR029787 Nucleotide cyclase YH65_04380 970d8e94ccbca6cd975928751045e859 522 Gene3D G3DSA:3.30.300.30 419 502 9.7E-17 T 11-10-2018 YH65_04380 970d8e94ccbca6cd975928751045e859 522 Gene3D G3DSA:3.40.50.12780 2 418 1.9E-81 T 11-10-2018 YH65_04380 970d8e94ccbca6cd975928751045e859 522 Pfam PF00501 AMP-binding enzyme 11 425 2.3E-72 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 YH65_04380 970d8e94ccbca6cd975928751045e859 522 SUPERFAMILY SSF56801 3 504 1.05E-104 T 11-10-2018 YH65_10935 4a0f71ceb7e5a55e630836ea7bb1370e 315 Gene3D G3DSA:1.10.8.300 195 312 3.7E-38 T 11-10-2018 YH65_10935 4a0f71ceb7e5a55e630836ea7bb1370e 315 SUPERFAMILY SSF52540 8 287 4.73E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_10935 4a0f71ceb7e5a55e630836ea7bb1370e 315 SMART SM00382 32 174 0.0087 T 11-10-2018 IPR003593 AAA+ ATPase domain YH65_10935 4a0f71ceb7e5a55e630836ea7bb1370e 315 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 35 165 3.1E-65 T 11-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 YH65_10935 4a0f71ceb7e5a55e630836ea7bb1370e 315 PIRSF PIRSF002849 1 315 1.8E-128 T 11-10-2018 YH65_10935 4a0f71ceb7e5a55e630836ea7bb1370e 315 Gene3D G3DSA:3.40.50.300 16 182 2.8E-46 T 11-10-2018 YH65_10430 a28344085d2bfef7ef30b285ac5533c6 438 Gene3D G3DSA:2.60.40.650 306 437 4.8E-38 T 11-10-2018 YH65_10430 a28344085d2bfef7ef30b285ac5533c6 438 Pfam PF00174 Oxidoreductase molybdopterin binding domain 121 281 5.0E-48 T 11-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 YH65_10430 a28344085d2bfef7ef30b285ac5533c6 438 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 12 40 8.0E-4 T 11-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal YH65_10430 a28344085d2bfef7ef30b285ac5533c6 438 PRINTS PR00407 Eukaryotic molybdopterin domain signature 265 278 3.3E-13 T 11-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 YH65_10430 a28344085d2bfef7ef30b285ac5533c6 438 PRINTS PR00407 Eukaryotic molybdopterin domain signature 249 262 3.3E-13 T 11-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 YH65_10430 a28344085d2bfef7ef30b285ac5533c6 438 PRINTS PR00407 Eukaryotic molybdopterin domain signature 109 125 3.3E-13 T 11-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 YH65_10430 a28344085d2bfef7ef30b285ac5533c6 438 PRINTS PR00407 Eukaryotic molybdopterin domain signature 232 248 3.3E-13 T 11-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 YH65_10430 a28344085d2bfef7ef30b285ac5533c6 438 PRINTS PR00407 Eukaryotic molybdopterin domain signature 346 358 3.3E-13 T 11-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 YH65_10430 a28344085d2bfef7ef30b285ac5533c6 438 SUPERFAMILY SSF81296 307 426 2.59E-25 T 11-10-2018 IPR014756 Immunoglobulin E-set YH65_10430 a28344085d2bfef7ef30b285ac5533c6 438 Gene3D G3DSA:3.90.420.10 44 305 5.2E-86 T 11-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 YH65_10430 a28344085d2bfef7ef30b285ac5533c6 438 Pfam PF03404 Mo-co oxidoreductase dimerisation domain 304 421 1.0E-13 T 11-10-2018 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation GO:0016491|GO:0030151|GO:0055114 Reactome: R-HSA-1614517 YH65_10430 a28344085d2bfef7ef30b285ac5533c6 438 SUPERFAMILY SSF56524 70 296 1.01E-63 T 11-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 YH65_10430 a28344085d2bfef7ef30b285ac5533c6 438 TIGRFAM TIGR04555 sulfite_DH_soxC: sulfite dehydrogenase 14 434 1.7E-188 T 11-10-2018 IPR030835 Sulfite dehydrogenase SoxC YH65_02605 c57c5e68175f11586ce9fdbf956c487e 442 SUPERFAMILY SSF50621 289 429 1.74E-31 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 YH65_02605 c57c5e68175f11586ce9fdbf956c487e 442 Gene3D G3DSA:3.20.20.10 56 306 1.5E-96 T 11-10-2018 IPR029066 PLP-binding barrel YH65_02605 c57c5e68175f11586ce9fdbf956c487e 442 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 310 399 6.5E-10 T 11-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 YH65_02605 c57c5e68175f11586ce9fdbf956c487e 442 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 207 220 2.4E-5 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 YH65_02605 c57c5e68175f11586ce9fdbf956c487e 442 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 301 320 2.4E-5 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 YH65_02605 c57c5e68175f11586ce9fdbf956c487e 442 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 399 412 2.4E-5 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 YH65_02605 c57c5e68175f11586ce9fdbf956c487e 442 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 81 99 2.4E-5 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 YH65_02605 c57c5e68175f11586ce9fdbf956c487e 442 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 67 309 1.1E-29 T 11-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 YH65_02605 c57c5e68175f11586ce9fdbf956c487e 442 Gene3D G3DSA:2.40.37.10 35 432 1.5E-96 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 YH65_02605 c57c5e68175f11586ce9fdbf956c487e 442 SUPERFAMILY SSF51419 48 313 1.28E-52 T 11-10-2018 IPR029066 PLP-binding barrel YH65_00505 0d0102aa3a97acf14660db92b333fe25 510 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 5 483 2.2E-177 T 11-10-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_00505 0d0102aa3a97acf14660db92b333fe25 510 Pfam PF00361 Proton-conducting membrane transporter 125 417 2.3E-70 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_00505 0d0102aa3a97acf14660db92b333fe25 510 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 160 184 3.6E-41 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_00505 0d0102aa3a97acf14660db92b333fe25 510 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 130 149 3.6E-41 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_00505 0d0102aa3a97acf14660db92b333fe25 510 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 235 259 3.6E-41 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_00505 0d0102aa3a97acf14660db92b333fe25 510 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 375 401 3.6E-41 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_00505 0d0102aa3a97acf14660db92b333fe25 510 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 323 342 3.6E-41 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_01175 db94cf7e71257bb3d597cd6cde03d573 50 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 17.834 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_01175 db94cf7e71257bb3d597cd6cde03d573 50 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 2 49 4.1E-19 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_01175 db94cf7e71257bb3d597cd6cde03d573 50 Gene3D G3DSA:2.20.28.120 1 50 1.4E-19 T 11-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_01175 db94cf7e71257bb3d597cd6cde03d573 50 SUPERFAMILY SSF57829 1 49 2.99E-17 T 11-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 YH65_01175 db94cf7e71257bb3d597cd6cde03d573 50 Pfam PF00471 Ribosomal protein L33 3 49 8.1E-19 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_01175 db94cf7e71257bb3d597cd6cde03d573 50 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 11-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YH65_01560 aa0ab44664ea0d044ba38e0ac6b23359 624 SUPERFAMILY SSF52540 367 543 2.31E-16 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_01560 aa0ab44664ea0d044ba38e0ac6b23359 624 Pfam PF00271 Helicase conserved C-terminal domain 426 498 1.3E-4 T 11-10-2018 IPR001650 Helicase, C-terminal YH65_01560 aa0ab44664ea0d044ba38e0ac6b23359 624 Hamap MF_00983 Probable primosomal protein N' [priA]. 6 623 19.662 T 11-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 YH65_01560 aa0ab44664ea0d044ba38e0ac6b23359 624 Gene3D G3DSA:3.40.50.300 313 522 8.8E-11 T 11-10-2018 YH65_01560 aa0ab44664ea0d044ba38e0ac6b23359 624 SMART SM00487 120 307 7.1E-15 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain YH65_01560 aa0ab44664ea0d044ba38e0ac6b23359 624 Gene3D G3DSA:3.40.50.300 114 295 5.8E-59 T 11-10-2018 YH65_01560 aa0ab44664ea0d044ba38e0ac6b23359 624 SMART SM00490 402 498 0.0077 T 11-10-2018 IPR001650 Helicase, C-terminal YH65_01560 aa0ab44664ea0d044ba38e0ac6b23359 624 SUPERFAMILY SSF52540 121 286 7.71E-32 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_01560 aa0ab44664ea0d044ba38e0ac6b23359 624 Pfam PF00270 DEAD/DEAH box helicase 125 281 4.4E-14 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 YH65_01560 aa0ab44664ea0d044ba38e0ac6b23359 624 TIGRFAM TIGR00595 priA: primosomal protein N' 142 621 3.3E-144 T 11-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 YH65_00580 e06180ea2c31846a1ad75ea31c1382b0 115 Pfam PF02410 Ribosomal silencing factor during starvation 9 100 8.4E-20 T 11-10-2018 YH65_00580 e06180ea2c31846a1ad75ea31c1382b0 115 SUPERFAMILY SSF81301 1 101 3.27E-24 T 11-10-2018 YH65_00580 e06180ea2c31846a1ad75ea31c1382b0 115 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 103 17.751 T 11-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS YH65_00580 e06180ea2c31846a1ad75ea31c1382b0 115 Gene3D G3DSA:3.30.460.10 2 115 8.0E-22 T 11-10-2018 YH65_00580 e06180ea2c31846a1ad75ea31c1382b0 115 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 7 101 2.3E-25 T 11-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS YH65_06255 fb76fb409d74684b0f7d8f2dcef8536d 324 Pfam PF08448 PAS fold 24 137 2.6E-13 T 11-10-2018 IPR013656 PAS fold-4 YH65_06255 fb76fb409d74684b0f7d8f2dcef8536d 324 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 18 143 6.4E-10 T 11-10-2018 IPR000014 PAS domain YH65_06255 fb76fb409d74684b0f7d8f2dcef8536d 324 Gene3D G3DSA:3.30.450.20 5 140 5.2E-17 T 11-10-2018 YH65_06255 fb76fb409d74684b0f7d8f2dcef8536d 324 SMART SM00267 143 321 1.0E-46 T 11-10-2018 IPR000160 GGDEF domain YH65_06255 fb76fb409d74684b0f7d8f2dcef8536d 324 Gene3D G3DSA:3.30.70.270 141 321 3.4E-46 T 11-10-2018 YH65_06255 fb76fb409d74684b0f7d8f2dcef8536d 324 Pfam PF00990 Diguanylate cyclase, GGDEF domain 155 317 3.4E-38 T 11-10-2018 IPR000160 GGDEF domain YH65_06255 fb76fb409d74684b0f7d8f2dcef8536d 324 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 150 320 1.2E-42 T 11-10-2018 IPR000160 GGDEF domain YH65_06255 fb76fb409d74684b0f7d8f2dcef8536d 324 SUPERFAMILY SSF55785 4 134 5.93E-17 T 11-10-2018 IPR035965 PAS domain superfamily YH65_06255 fb76fb409d74684b0f7d8f2dcef8536d 324 SUPERFAMILY SSF55073 159 319 4.16E-38 T 11-10-2018 IPR029787 Nucleotide cyclase YH65_09005 0f89eb781afdd971e713af3e29acb284 353 Gene3D G3DSA:3.20.20.370 136 351 2.2E-61 T 11-10-2018 YH65_09005 0f89eb781afdd971e713af3e29acb284 353 SUPERFAMILY SSF88713 138 351 8.0E-56 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 YH65_09005 0f89eb781afdd971e713af3e29acb284 353 Pfam PF04748 Divergent polysaccharide deacetylase 143 350 6.9E-60 T 11-10-2018 IPR006837 Divergent polysaccharide deacetylase YH65_00740 40bd7e9b64490c3bb149cb1abc766d3d 266 Pfam PF12838 4Fe-4S dicluster domain 57 111 4.4E-10 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YH65_00740 40bd7e9b64490c3bb149cb1abc766d3d 266 Gene3D G3DSA:3.30.70.20 186 248 7.8E-10 T 11-10-2018 YH65_00740 40bd7e9b64490c3bb149cb1abc766d3d 266 Gene3D G3DSA:3.30.70.20 51 130 3.8E-13 T 11-10-2018 YH65_00740 40bd7e9b64490c3bb149cb1abc766d3d 266 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 230 241 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YH65_00740 40bd7e9b64490c3bb149cb1abc766d3d 266 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 57 68 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YH65_00740 40bd7e9b64490c3bb149cb1abc766d3d 266 SUPERFAMILY SSF54862 54 259 8.37E-19 T 11-10-2018 YH65_00740 40bd7e9b64490c3bb149cb1abc766d3d 266 Pfam PF00037 4Fe-4S binding domain 227 245 2.7E-6 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YH65_08285 8f4d622ac5f3ac204d486451ab7c966e 314 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 149 305 2.3E-23 T 11-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 YH65_08285 8f4d622ac5f3ac204d486451ab7c966e 314 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 5 144 1.3E-38 T 11-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 YH65_08285 8f4d622ac5f3ac204d486451ab7c966e 314 PIRSF PIRSF000102 1 313 5.5E-97 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 YH65_08285 8f4d622ac5f3ac204d486451ab7c966e 314 PRINTS PR00086 L-lactate dehydrogenase signature 5 29 7.0E-27 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 YH65_08285 8f4d622ac5f3ac204d486451ab7c966e 314 PRINTS PR00086 L-lactate dehydrogenase signature 172 185 7.0E-27 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 YH65_08285 8f4d622ac5f3ac204d486451ab7c966e 314 PRINTS PR00086 L-lactate dehydrogenase signature 142 160 7.0E-27 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 YH65_08285 8f4d622ac5f3ac204d486451ab7c966e 314 PRINTS PR00086 L-lactate dehydrogenase signature 30 54 7.0E-27 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 YH65_08285 8f4d622ac5f3ac204d486451ab7c966e 314 PRINTS PR00086 L-lactate dehydrogenase signature 118 138 7.0E-27 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 YH65_08285 8f4d622ac5f3ac204d486451ab7c966e 314 Gene3D G3DSA:3.40.50.720 1 146 2.9E-52 T 11-10-2018 YH65_08285 8f4d622ac5f3ac204d486451ab7c966e 314 Gene3D G3DSA:3.90.110.10 147 305 2.4E-46 T 11-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 YH65_08285 8f4d622ac5f3ac204d486451ab7c966e 314 SUPERFAMILY SSF56327 148 309 1.59E-44 T 11-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 YH65_08285 8f4d622ac5f3ac204d486451ab7c966e 314 SUPERFAMILY SSF51735 2 146 7.37E-47 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily YH65_06265 5f16f77e24ab62dcfdd908d9fe2e48fe 705 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 8 673 1.6E-167 T 11-10-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 YH65_06265 5f16f77e24ab62dcfdd908d9fe2e48fe 705 Pfam PF07664 Ferrous iron transport protein B C terminus 453 504 2.8E-16 T 11-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 YH65_06265 5f16f77e24ab62dcfdd908d9fe2e48fe 705 Pfam PF07670 Nucleoside recognition 511 676 7.8E-29 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 YH65_06265 5f16f77e24ab62dcfdd908d9fe2e48fe 705 Pfam PF07670 Nucleoside recognition 349 442 8.3E-9 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 YH65_06265 5f16f77e24ab62dcfdd908d9fe2e48fe 705 SUPERFAMILY SSF52540 3 167 3.18E-33 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_06265 5f16f77e24ab62dcfdd908d9fe2e48fe 705 Pfam PF02421 Ferrous iron transport protein B 3 156 1.2E-59 T 11-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 YH65_06265 5f16f77e24ab62dcfdd908d9fe2e48fe 705 Gene3D G3DSA:3.40.50.300 3 187 1.8E-40 T 11-10-2018 YH65_10835 e3d7bc35116f82672a37a1a159122ebe 393 Gene3D G3DSA:3.40.50.300 2 149 4.2E-43 T 11-10-2018 YH65_10835 e3d7bc35116f82672a37a1a159122ebe 393 Pfam PF12002 MgsA AAA+ ATPase C terminal 239 390 3.3E-51 T 11-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal YH65_10835 e3d7bc35116f82672a37a1a159122ebe 393 Pfam PF16193 AAA C-terminal domain 167 238 5.9E-15 T 11-10-2018 IPR032423 AAA C-terminal domain YH65_10835 e3d7bc35116f82672a37a1a159122ebe 393 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 42 141 1.8E-19 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 YH65_10835 e3d7bc35116f82672a37a1a159122ebe 393 Gene3D G3DSA:1.10.8.60 150 214 1.4E-9 T 11-10-2018 YH65_10835 e3d7bc35116f82672a37a1a159122ebe 393 Gene3D G3DSA:1.20.272.10 216 318 7.1E-39 T 11-10-2018 YH65_10835 e3d7bc35116f82672a37a1a159122ebe 393 SUPERFAMILY SSF52540 2 200 3.76E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_10835 e3d7bc35116f82672a37a1a159122ebe 393 SUPERFAMILY SSF48019 224 391 1.64E-56 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 YH65_10835 e3d7bc35116f82672a37a1a159122ebe 393 SMART SM00382 37 150 2.0E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain YH65_10835 e3d7bc35116f82672a37a1a159122ebe 393 Gene3D G3DSA:1.10.3710.10 320 384 7.4E-9 T 11-10-2018 YH65_09225 8d34481e0560109efb7c5dccc15c2981 340 Pfam PF01979 Amidohydrolase family 13 298 5.1E-10 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 YH65_09225 8d34481e0560109efb7c5dccc15c2981 340 SUPERFAMILY SSF51556 6 334 9.54E-106 T 11-10-2018 IPR032466 Metal-dependent hydrolase YH65_09225 8d34481e0560109efb7c5dccc15c2981 340 Gene3D G3DSA:3.20.20.140 1 336 1.9E-95 T 11-10-2018 YH65_09225 8d34481e0560109efb7c5dccc15c2981 340 ProSitePatterns PS00483 Dihydroorotase signature 2. 241 252 - T 11-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 YH65_09225 8d34481e0560109efb7c5dccc15c2981 340 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 6 335 9.1E-112 T 11-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 YH65_09225 8d34481e0560109efb7c5dccc15c2981 340 Hamap MF_00219 Dihydroorotase [pyrC]. 4 335 43.191 T 11-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 YH65_09225 8d34481e0560109efb7c5dccc15c2981 340 ProSitePatterns PS00482 Dihydroorotase signature 1. 13 21 - T 11-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 YH65_09225 8d34481e0560109efb7c5dccc15c2981 340 PIRSF PIRSF001237 3 337 2.0E-117 T 11-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 YH65_01760 633ad1284870759038a1a3e624117758 189 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 7 189 3.6E-75 T 11-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 YH65_01760 633ad1284870759038a1a3e624117758 189 Gene3D G3DSA:3.40.50.10990 1 169 7.5E-68 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 YH65_01760 633ad1284870759038a1a3e624117758 189 SUPERFAMILY SSF142695 3 167 7.06E-53 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 YH65_01760 633ad1284870759038a1a3e624117758 189 Pfam PF00925 GTP cyclohydrolase II 10 165 3.8E-61 T 11-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 YH65_01760 633ad1284870759038a1a3e624117758 189 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 2 189 37.677 T 11-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 YH65_06815 6f36010e17022e174f58987e2b822dcc 113 Pfam PF02627 Carboxymuconolactone decarboxylase family 27 101 3.1E-18 T 11-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 YH65_06815 6f36010e17022e174f58987e2b822dcc 113 Gene3D G3DSA:1.20.1290.10 2 113 5.6E-30 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 YH65_06815 6f36010e17022e174f58987e2b822dcc 113 SUPERFAMILY SSF69118 3 107 1.57E-25 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 YH65_06815 6f36010e17022e174f58987e2b822dcc 113 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 40 85 2.4E-10 T 11-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 YH65_07110 5bf8b88762652bc57e76d3d7bdc252dc 216 SUPERFAMILY SSF52540 3 213 2.08E-22 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_07110 5bf8b88762652bc57e76d3d7bdc252dc 216 Pfam PF02223 Thymidylate kinase 107 211 4.4E-9 T 11-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 YH65_07110 5bf8b88762652bc57e76d3d7bdc252dc 216 Gene3D G3DSA:3.40.50.300 2 216 4.4E-35 T 11-10-2018 YH65_01190 79240ed85b7459862e4eaf13883d3bf3 176 Pfam PF00467 KOW motif 125 149 1.4E-6 T 11-10-2018 IPR005824 KOW YH65_01190 79240ed85b7459862e4eaf13883d3bf3 176 SMART SM00739 121 148 1.7E-5 T 11-10-2018 IPR005824 KOW YH65_01190 79240ed85b7459862e4eaf13883d3bf3 176 ProSitePatterns PS01014 Transcription termination factor nusG signature. 158 167 - T 11-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site YH65_01190 79240ed85b7459862e4eaf13883d3bf3 176 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 5 175 6.8E-63 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 YH65_01190 79240ed85b7459862e4eaf13883d3bf3 176 SUPERFAMILY SSF82679 3 112 6.67E-32 T 11-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 YH65_01190 79240ed85b7459862e4eaf13883d3bf3 176 Gene3D G3DSA:3.30.70.940 1 116 3.5E-35 T 11-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 YH65_01190 79240ed85b7459862e4eaf13883d3bf3 176 Pfam PF02357 Transcription termination factor nusG 4 106 5.3E-20 T 11-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 YH65_01190 79240ed85b7459862e4eaf13883d3bf3 176 PRINTS PR00338 Transcription termination factor NUSG signature 57 69 2.9E-16 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 YH65_01190 79240ed85b7459862e4eaf13883d3bf3 176 PRINTS PR00338 Transcription termination factor NUSG signature 133 148 2.9E-16 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 YH65_01190 79240ed85b7459862e4eaf13883d3bf3 176 PRINTS PR00338 Transcription termination factor NUSG signature 151 167 2.9E-16 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 YH65_01190 79240ed85b7459862e4eaf13883d3bf3 176 SMART SM00738 2 110 2.1E-33 T 11-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 YH65_01190 79240ed85b7459862e4eaf13883d3bf3 176 Gene3D G3DSA:2.30.30.30 117 175 5.0E-25 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 YH65_01190 79240ed85b7459862e4eaf13883d3bf3 176 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 2 175 21.516 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 YH65_01190 79240ed85b7459862e4eaf13883d3bf3 176 SUPERFAMILY SSF50104 119 175 9.03E-18 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily YH65_03265 ed4787b1a44212e0fce9c8772f6151a6 172 Pfam PF00691 OmpA family 70 164 1.1E-16 T 11-10-2018 IPR006665 OmpA-like domain YH65_03265 ed4787b1a44212e0fce9c8772f6151a6 172 PRINTS PR01021 OMPA domain signature 71 93 3.4E-10 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YH65_03265 ed4787b1a44212e0fce9c8772f6151a6 172 PRINTS PR01021 OMPA domain signature 100 115 3.4E-10 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YH65_03265 ed4787b1a44212e0fce9c8772f6151a6 172 PRINTS PR01021 OMPA domain signature 115 131 3.4E-10 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YH65_03265 ed4787b1a44212e0fce9c8772f6151a6 172 SUPERFAMILY SSF103088 67 170 1.57E-28 T 11-10-2018 IPR036737 OmpA-like domain superfamily YH65_03265 ed4787b1a44212e0fce9c8772f6151a6 172 Gene3D G3DSA:3.30.1330.60 43 169 7.0E-29 T 11-10-2018 IPR036737 OmpA-like domain superfamily YH65_00570 6c58bce27b05096368d86f3005bcaabb 565 SUPERFAMILY SSF52374 111 445 1.05E-88 T 11-10-2018 YH65_00570 6c58bce27b05096368d86f3005bcaabb 565 SUPERFAMILY SSF55190 3 95 5.49E-24 T 11-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 YH65_00570 6c58bce27b05096368d86f3005bcaabb 565 SMART SM00836 451 565 1.6E-32 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 YH65_00570 6c58bce27b05096368d86f3005bcaabb 565 SMART SM01016 1 86 4.4E-35 T 11-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 YH65_00570 6c58bce27b05096368d86f3005bcaabb 565 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 3 86 4.7E-25 T 11-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 YH65_00570 6c58bce27b05096368d86f3005bcaabb 565 Gene3D G3DSA:1.10.730.10 445 565 6.8E-29 T 11-10-2018 YH65_00570 6c58bce27b05096368d86f3005bcaabb 565 Gene3D G3DSA:3.30.1360.70 1 105 5.8E-31 T 11-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 YH65_00570 6c58bce27b05096368d86f3005bcaabb 565 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 122 133 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 YH65_00570 6c58bce27b05096368d86f3005bcaabb 565 Gene3D G3DSA:3.40.50.620 108 444 4.1E-111 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YH65_00570 6c58bce27b05096368d86f3005bcaabb 565 Hamap MF_00123 Arginine--tRNA ligase [argS]. 1 565 26.59 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 YH65_00570 6c58bce27b05096368d86f3005bcaabb 565 PRINTS PR01038 Arginyl-tRNA synthetase signature 129 145 3.3E-27 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 YH65_00570 6c58bce27b05096368d86f3005bcaabb 565 PRINTS PR01038 Arginyl-tRNA synthetase signature 114 129 3.3E-27 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 YH65_00570 6c58bce27b05096368d86f3005bcaabb 565 PRINTS PR01038 Arginyl-tRNA synthetase signature 295 316 3.3E-27 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 YH65_00570 6c58bce27b05096368d86f3005bcaabb 565 PRINTS PR01038 Arginyl-tRNA synthetase signature 153 166 3.3E-27 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 YH65_00570 6c58bce27b05096368d86f3005bcaabb 565 Pfam PF05746 DALR anticodon binding domain 451 565 3.6E-28 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 YH65_00570 6c58bce27b05096368d86f3005bcaabb 565 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 4 565 1.1E-166 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 YH65_00570 6c58bce27b05096368d86f3005bcaabb 565 SUPERFAMILY SSF47323 445 565 6.54E-31 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 YH65_00570 6c58bce27b05096368d86f3005bcaabb 565 Pfam PF00750 tRNA synthetases class I (R) 104 437 2.0E-124 T 11-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 YH65_06910 696643b1cbd703097829e0aac4bed9e5 158 SUPERFAMILY SSF52374 3 156 5.63E-45 T 11-10-2018 YH65_06910 696643b1cbd703097829e0aac4bed9e5 158 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 2 158 33.296 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 YH65_06910 696643b1cbd703097829e0aac4bed9e5 158 Gene3D G3DSA:3.40.50.620 1 157 1.8E-55 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YH65_06910 696643b1cbd703097829e0aac4bed9e5 158 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 20 41 9.2E-49 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 YH65_06910 696643b1cbd703097829e0aac4bed9e5 158 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 85 101 9.2E-49 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 YH65_06910 696643b1cbd703097829e0aac4bed9e5 158 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 2 20 9.2E-49 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 YH65_06910 696643b1cbd703097829e0aac4bed9e5 158 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 112 134 9.2E-49 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 YH65_06910 696643b1cbd703097829e0aac4bed9e5 158 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 49 73 9.2E-49 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 YH65_06910 696643b1cbd703097829e0aac4bed9e5 158 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 62 3.6E-20 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 YH65_06910 696643b1cbd703097829e0aac4bed9e5 158 Pfam PF01467 Cytidylyltransferase-like 5 133 7.5E-23 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 YH65_06910 696643b1cbd703097829e0aac4bed9e5 158 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 4 154 6.2E-59 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 YH65_08170 312fa2e3cd9e357aa9d3cf40bb040f4d 233 SUPERFAMILY SSF52172 1 170 1.32E-28 T 11-10-2018 IPR011006 CheY-like superfamily YH65_08170 312fa2e3cd9e357aa9d3cf40bb040f4d 233 Gene3D G3DSA:1.10.10.10 132 230 6.8E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YH65_08170 312fa2e3cd9e357aa9d3cf40bb040f4d 233 SMART SM00862 160 229 8.6E-12 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YH65_08170 312fa2e3cd9e357aa9d3cf40bb040f4d 233 Gene3D G3DSA:3.40.50.2300 1 131 3.1E-26 T 11-10-2018 YH65_08170 312fa2e3cd9e357aa9d3cf40bb040f4d 233 SUPERFAMILY SSF46894 141 229 9.07E-16 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YH65_08170 312fa2e3cd9e357aa9d3cf40bb040f4d 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 161 229 3.8E-13 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YH65_08170 312fa2e3cd9e357aa9d3cf40bb040f4d 233 SMART SM00448 2 115 3.0E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YH65_08170 312fa2e3cd9e357aa9d3cf40bb040f4d 233 Pfam PF00072 Response regulator receiver domain 4 115 5.3E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YH65_05065 81c2a242629d26de2f5115d59218b28e 281 Gene3D G3DSA:3.40.50.10860 6 274 1.7E-113 T 11-10-2018 YH65_05065 81c2a242629d26de2f5115d59218b28e 281 SUPERFAMILY SSF51735 121 277 7.02E-56 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily YH65_05065 81c2a242629d26de2f5115d59218b28e 281 SUPERFAMILY SSF53223 1 120 2.11E-41 T 11-10-2018 YH65_05065 81c2a242629d26de2f5115d59218b28e 281 Hamap MF_01576 Bifunctional protein FolD [folD]. 1 281 38.987 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 YH65_05065 81c2a242629d26de2f5115d59218b28e 281 Gene3D G3DSA:3.40.50.720 4 257 1.7E-113 T 11-10-2018 YH65_05065 81c2a242629d26de2f5115d59218b28e 281 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 122 280 2.1E-71 T 11-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 YH65_05065 81c2a242629d26de2f5115d59218b28e 281 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 74 99 - T 11-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 YH65_05065 81c2a242629d26de2f5115d59218b28e 281 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 3 119 2.1E-40 T 11-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 YH65_05065 81c2a242629d26de2f5115d59218b28e 281 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 258 266 - T 11-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 YH65_05065 81c2a242629d26de2f5115d59218b28e 281 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 202 231 2.7E-82 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 YH65_05065 81c2a242629d26de2f5115d59218b28e 281 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 108 129 2.7E-82 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 YH65_05065 81c2a242629d26de2f5115d59218b28e 281 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 32 54 2.7E-82 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 YH65_05065 81c2a242629d26de2f5115d59218b28e 281 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 254 272 2.7E-82 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 YH65_05065 81c2a242629d26de2f5115d59218b28e 281 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 153 173 2.7E-82 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 YH65_05065 81c2a242629d26de2f5115d59218b28e 281 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 237 253 2.7E-82 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 YH65_05065 81c2a242629d26de2f5115d59218b28e 281 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 73 100 2.7E-82 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 YH65_05565 a8ba278ccbae1326afb70dbb05db6a18 457 Pfam PF00271 Helicase conserved C-terminal domain 232 339 6.9E-28 T 11-10-2018 IPR001650 Helicase, C-terminal YH65_05565 a8ba278ccbae1326afb70dbb05db6a18 457 SUPERFAMILY SSF52540 74 360 3.37E-75 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_05565 a8ba278ccbae1326afb70dbb05db6a18 457 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 457 49.054 T 11-10-2018 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 YH65_05565 a8ba278ccbae1326afb70dbb05db6a18 457 Gene3D G3DSA:3.40.50.300 213 455 6.0E-50 T 11-10-2018 YH65_05565 a8ba278ccbae1326afb70dbb05db6a18 457 SMART SM00490 258 339 1.4E-32 T 11-10-2018 IPR001650 Helicase, C-terminal YH65_05565 a8ba278ccbae1326afb70dbb05db6a18 457 SMART SM00487 20 222 3.4E-61 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain YH65_05565 a8ba278ccbae1326afb70dbb05db6a18 457 Pfam PF00270 DEAD/DEAH box helicase 25 196 1.4E-51 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 YH65_05565 a8ba278ccbae1326afb70dbb05db6a18 457 Gene3D G3DSA:3.40.50.300 1 211 3.1E-77 T 11-10-2018 YH65_05565 a8ba278ccbae1326afb70dbb05db6a18 457 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 153 161 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site YH65_07460 fc9ed46036b38402990d6974ab353a70 583 Gene3D G3DSA:3.60.40.10 339 575 1.1E-53 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 YH65_07460 fc9ed46036b38402990d6974ab353a70 583 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 395 575 1.3E-35 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 YH65_07460 fc9ed46036b38402990d6974ab353a70 583 Gene3D G3DSA:3.30.450.20 71 201 4.6E-31 T 11-10-2018 YH65_07460 fc9ed46036b38402990d6974ab353a70 583 SUPERFAMILY SSF81606 374 572 8.11E-7 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 YH65_07460 fc9ed46036b38402990d6974ab353a70 583 SMART SM00331 368 576 5.7E-35 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 YH65_07460 fc9ed46036b38402990d6974ab353a70 583 Gene3D G3DSA:3.30.450.20 63 296 4.6E-31 T 11-10-2018 YH65_07460 fc9ed46036b38402990d6974ab353a70 583 Pfam PF02743 Cache domain 46 293 1.4E-21 T 11-10-2018 IPR033479 Double Cache domain 1 YH65_07460 fc9ed46036b38402990d6974ab353a70 583 SUPERFAMILY SSF103190 132 205 2.04E-5 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily YH65_06005 bb9abea569758ab65b326ee6f6dc50f9 608 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 460 602 1.6E-45 T 11-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding YH65_06005 bb9abea569758ab65b326ee6f6dc50f9 608 SUPERFAMILY SSF51206 7 135 3.93E-19 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like YH65_06005 bb9abea569758ab65b326ee6f6dc50f9 608 Pfam PF00027 Cyclic nucleotide-binding domain 33 114 1.5E-8 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain YH65_06005 bb9abea569758ab65b326ee6f6dc50f9 608 SUPERFAMILY SSF54631 149 268 4.17E-21 T 11-10-2018 YH65_06005 bb9abea569758ab65b326ee6f6dc50f9 608 SMART SM00100 13 129 7.7E-5 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain YH65_06005 bb9abea569758ab65b326ee6f6dc50f9 608 Gene3D G3DSA:2.60.120.10 4 136 3.3E-17 T 11-10-2018 IPR014710 RmlC-like jelly roll fold YH65_06005 bb9abea569758ab65b326ee6f6dc50f9 608 Gene3D G3DSA:3.10.580.10 137 267 1.0E-19 T 11-10-2018 YH65_06005 bb9abea569758ab65b326ee6f6dc50f9 608 Pfam PF03445 Putative nucleotidyltransferase DUF294 292 421 2.1E-34 T 11-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 YH65_06005 bb9abea569758ab65b326ee6f6dc50f9 608 Pfam PF00571 CBS domain 160 203 0.0043 T 11-10-2018 IPR000644 CBS domain YH65_06005 bb9abea569758ab65b326ee6f6dc50f9 608 Pfam PF00571 CBS domain 213 267 1.0E-7 T 11-10-2018 IPR000644 CBS domain YH65_06005 bb9abea569758ab65b326ee6f6dc50f9 608 SMART SM00116 156 202 5.8 T 11-10-2018 IPR000644 CBS domain YH65_06005 bb9abea569758ab65b326ee6f6dc50f9 608 SMART SM00116 219 267 6.3E-5 T 11-10-2018 IPR000644 CBS domain YH65_10635 ed397bdb99e5ef91f2a6a888911f7f37 178 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 175 1.2E-65 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 YH65_10635 ed397bdb99e5ef91f2a6a888911f7f37 178 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 153 161 - T 11-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YH65_10635 ed397bdb99e5ef91f2a6a888911f7f37 178 PIRSF PIRSF002162 1 176 6.8E-41 T 11-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_10635 ed397bdb99e5ef91f2a6a888911f7f37 178 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 175 34.47 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 YH65_10635 ed397bdb99e5ef91f2a6a888911f7f37 178 Gene3D G3DSA:3.90.930.12 83 178 4.0E-38 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_10635 ed397bdb99e5ef91f2a6a888911f7f37 178 Gene3D G3DSA:3.90.930.12 1 82 1.8E-18 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_10635 ed397bdb99e5ef91f2a6a888911f7f37 178 Pfam PF00347 Ribosomal protein L6 11 81 1.7E-6 T 11-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_10635 ed397bdb99e5ef91f2a6a888911f7f37 178 Pfam PF00347 Ribosomal protein L6 91 163 5.8E-20 T 11-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_10635 ed397bdb99e5ef91f2a6a888911f7f37 178 PRINTS PR00059 Ribosomal protein L6 signature 99 115 2.7E-30 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 YH65_10635 ed397bdb99e5ef91f2a6a888911f7f37 178 PRINTS PR00059 Ribosomal protein L6 signature 71 96 2.7E-30 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 YH65_10635 ed397bdb99e5ef91f2a6a888911f7f37 178 PRINTS PR00059 Ribosomal protein L6 signature 140 161 2.7E-30 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 YH65_10635 ed397bdb99e5ef91f2a6a888911f7f37 178 SUPERFAMILY SSF56053 83 175 2.67E-34 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_10635 ed397bdb99e5ef91f2a6a888911f7f37 178 SUPERFAMILY SSF56053 2 82 1.1E-16 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_09050 0ba7babf5be6cc853ff8cb07af8e6cb7 212 Gene3D G3DSA:3.30.1380.10 61 211 1.1E-18 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 YH65_09050 0ba7babf5be6cc853ff8cb07af8e6cb7 212 SUPERFAMILY SSF55166 53 211 1.05E-27 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 YH65_09050 0ba7babf5be6cc853ff8cb07af8e6cb7 212 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 126 211 6.2E-22 T 11-10-2018 IPR039561 Peptidase M15C GO:0008233 YH65_06720 6fee48af29cf61992db9f2011479ec03 381 Pfam PF07075 Protein of unknown function (DUF1343) 35 380 3.4E-124 T 11-10-2018 IPR008302 Uncharacterised conserved protein UCP016719 YH65_06720 6fee48af29cf61992db9f2011479ec03 381 Gene3D G3DSA:3.40.50.12170 13 381 3.0E-143 T 11-10-2018 YH65_06720 6fee48af29cf61992db9f2011479ec03 381 PIRSF PIRSF016719 9 381 6.4E-103 T 11-10-2018 IPR008302 Uncharacterised conserved protein UCP016719 YH65_00830 76a0ec076c39c2d9581d28ce050d02d0 312 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 311 1.5E-131 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 YH65_00830 76a0ec076c39c2d9581d28ce050d02d0 312 Gene3D G3DSA:3.90.226.10 1 311 3.3E-100 T 11-10-2018 YH65_00830 76a0ec076c39c2d9581d28ce050d02d0 312 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 106 124 1.7E-43 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 YH65_00830 76a0ec076c39c2d9581d28ce050d02d0 312 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 190 199 1.7E-43 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 YH65_00830 76a0ec076c39c2d9581d28ce050d02d0 312 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 146 159 1.7E-43 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 YH65_00830 76a0ec076c39c2d9581d28ce050d02d0 312 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 81 92 1.7E-43 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 YH65_00830 76a0ec076c39c2d9581d28ce050d02d0 312 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 127 143 1.7E-43 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 YH65_00830 76a0ec076c39c2d9581d28ce050d02d0 312 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 162 175 1.7E-43 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 YH65_00830 76a0ec076c39c2d9581d28ce050d02d0 312 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 4 141 3.9E-48 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 YH65_00830 76a0ec076c39c2d9581d28ce050d02d0 312 SUPERFAMILY SSF52096 23 309 5.55E-86 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily YH65_00830 76a0ec076c39c2d9581d28ce050d02d0 312 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 4 309 43.894 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 YH65_05370 8e9b66a9f394bb3a594948407f8805e3 239 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 11-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 YH65_05370 8e9b66a9f394bb3a594948407f8805e3 239 SUPERFAMILY SSF56104 4 236 1.11E-74 T 11-10-2018 YH65_05370 8e9b66a9f394bb3a594948407f8805e3 239 Gene3D G3DSA:3.30.470.20 85 222 1.4E-89 T 11-10-2018 YH65_05370 8e9b66a9f394bb3a594948407f8805e3 239 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 5 234 6.2E-66 T 11-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 YH65_05370 8e9b66a9f394bb3a594948407f8805e3 239 Gene3D G3DSA:3.30.200.20 7 233 1.4E-89 T 11-10-2018 YH65_05370 8e9b66a9f394bb3a594948407f8805e3 239 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 236 29.499 T 11-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 YH65_05370 8e9b66a9f394bb3a594948407f8805e3 239 ProSitePatterns PS01058 SAICAR synthetase signature 2. 174 182 - T 11-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 YH65_05370 8e9b66a9f394bb3a594948407f8805e3 239 Pfam PF01259 SAICAR synthetase 7 233 2.0E-59 T 11-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 YH65_00035 281276beb2f1d916153add842b66307b 400 SUPERFAMILY SSF53383 3 377 1.04E-99 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase YH65_00035 281276beb2f1d916153add842b66307b 400 TIGRFAM TIGR03403 nifS_epsilon: cysteine desulfurase, NifS family 3 384 4.6E-199 T 11-10-2018 IPR017773 Cysteine desulfurase NifS, proteobacteria GO:0006534|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 YH65_00035 281276beb2f1d916153add842b66307b 400 Gene3D G3DSA:3.90.1150.10 3 374 6.8E-135 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 YH65_00035 281276beb2f1d916153add842b66307b 400 Gene3D G3DSA:3.40.640.10 14 258 6.8E-135 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 YH65_00035 281276beb2f1d916153add842b66307b 400 PIRSF PIRSF005572 1 382 5.8E-123 T 11-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 YH65_00035 281276beb2f1d916153add842b66307b 400 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 195 214 - T 11-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site YH65_00035 281276beb2f1d916153add842b66307b 400 Pfam PF00266 Aminotransferase class-V 3 366 3.4E-80 T 11-10-2018 IPR000192 Aminotransferase class V domain YH65_03525 d4025e5d2f3b929084d920bebba8108b 260 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 3 257 5.0E-91 T 11-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 YH65_03525 d4025e5d2f3b929084d920bebba8108b 260 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 3 258 1.1E-88 T 11-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 YH65_03525 d4025e5d2f3b929084d920bebba8108b 260 Gene3D G3DSA:3.20.20.70 1 260 9.4E-95 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YH65_03525 d4025e5d2f3b929084d920bebba8108b 260 SUPERFAMILY SSF63892 2 258 2.62E-80 T 11-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 YH65_03525 d4025e5d2f3b929084d920bebba8108b 260 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 260 95.084 T 11-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 YH65_01250 5b730cd515469de929db84f4094c4daa 125 Hamap MF_00818 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 125 41.531 T 11-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 YH65_01250 5b730cd515469de929db84f4094c4daa 125 TIGRFAM TIGR03139 QueF-II: 7-cyano-7-deazaguanine reductase 20 121 3.0E-36 T 11-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 YH65_01250 5b730cd515469de929db84f4094c4daa 125 PIRSF PIRSF027377 1 124 1.2E-44 T 11-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 YH65_01250 5b730cd515469de929db84f4094c4daa 125 Gene3D G3DSA:3.30.1130.10 12 124 4.6E-33 T 11-10-2018 YH65_01250 5b730cd515469de929db84f4094c4daa 125 SUPERFAMILY SSF55620 12 116 3.48E-27 T 11-10-2018 YH65_01250 5b730cd515469de929db84f4094c4daa 125 Pfam PF14489 QueF-like protein 47 122 2.0E-28 T 11-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 YH65_09095 691c71badc948ca495ba63dcef6a7ec5 206 Gene3D G3DSA:3.40.190.10 3 192 2.4E-65 T 11-10-2018 YH65_09095 691c71badc948ca495ba63dcef6a7ec5 206 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 138 159 - T 11-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 YH65_09095 691c71badc948ca495ba63dcef6a7ec5 206 Pfam PF01634 ATP phosphoribosyltransferase 47 199 5.4E-50 T 11-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 YH65_09095 691c71badc948ca495ba63dcef6a7ec5 206 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 1 203 50.819 T 11-10-2018 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 YH65_09095 691c71badc948ca495ba63dcef6a7ec5 206 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 2 179 8.1E-59 T 11-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 YH65_09095 691c71badc948ca495ba63dcef6a7ec5 206 Gene3D G3DSA:3.40.190.10 88 171 2.4E-65 T 11-10-2018 YH65_09095 691c71badc948ca495ba63dcef6a7ec5 206 SUPERFAMILY SSF53850 1 202 8.9E-62 T 11-10-2018 YH65_06285 a53a7126a0cb81225cd9f95b5aa714b9 389 Pfam PF01641 SelR domain 271 383 1.9E-29 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 YH65_06285 a53a7126a0cb81225cd9f95b5aa714b9 389 Pfam PF01625 Peptide methionine sulfoxide reductase 1 159 6.8E-59 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 YH65_06285 a53a7126a0cb81225cd9f95b5aa714b9 389 SUPERFAMILY SSF55068 1 165 1.23E-65 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 YH65_06285 a53a7126a0cb81225cd9f95b5aa714b9 389 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 1 165 33.222 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 YH65_06285 a53a7126a0cb81225cd9f95b5aa714b9 389 Gene3D G3DSA:3.30.1060.10 1 173 1.1E-71 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 YH65_06285 a53a7126a0cb81225cd9f95b5aa714b9 389 Gene3D G3DSA:3.40.30.10 184 267 3.1E-12 T 11-10-2018 YH65_06285 a53a7126a0cb81225cd9f95b5aa714b9 389 Gene3D G3DSA:2.170.150.20 268 389 2.8E-33 T 11-10-2018 YH65_06285 a53a7126a0cb81225cd9f95b5aa714b9 389 SUPERFAMILY SSF52833 185 262 4.71E-9 T 11-10-2018 IPR036249 Thioredoxin-like superfamily YH65_06285 a53a7126a0cb81225cd9f95b5aa714b9 389 SUPERFAMILY SSF51316 272 388 6.28E-32 T 11-10-2018 IPR011057 Mss4-like superfamily YH65_06285 a53a7126a0cb81225cd9f95b5aa714b9 389 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 1 159 1.5E-55 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 YH65_07840 8f8e7f1b484ee2c5c61b820a33c99255 410 Gene3D G3DSA:1.10.287.130 156 269 1.2E-7 T 11-10-2018 YH65_07840 8f8e7f1b484ee2c5c61b820a33c99255 410 SMART SM00388 211 276 0.0028 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YH65_07840 8f8e7f1b484ee2c5c61b820a33c99255 410 Gene3D G3DSA:3.30.565.10 279 409 1.8E-5 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YH65_07840 8f8e7f1b484ee2c5c61b820a33c99255 410 SUPERFAMILY SSF55874 281 404 6.02E-6 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YH65_07840 8f8e7f1b484ee2c5c61b820a33c99255 410 SUPERFAMILY SSF47384 196 271 1.39E-7 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 YH65_06495 7d06994919e1629d8b8a4df24fa7d281 460 SMART SM00487 20 217 1.4E-59 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain YH65_06495 7d06994919e1629d8b8a4df24fa7d281 460 SMART SM00490 253 334 9.3E-35 T 11-10-2018 IPR001650 Helicase, C-terminal YH65_06495 7d06994919e1629d8b8a4df24fa7d281 460 Gene3D G3DSA:3.40.50.300 208 368 2.0E-54 T 11-10-2018 YH65_06495 7d06994919e1629d8b8a4df24fa7d281 460 Gene3D G3DSA:3.40.50.300 1 204 1.3E-68 T 11-10-2018 YH65_06495 7d06994919e1629d8b8a4df24fa7d281 460 SUPERFAMILY SSF52540 70 355 2.75E-77 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_06495 7d06994919e1629d8b8a4df24fa7d281 460 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 147 155 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site YH65_06495 7d06994919e1629d8b8a4df24fa7d281 460 Pfam PF00271 Helicase conserved C-terminal domain 227 334 9.1E-33 T 11-10-2018 IPR001650 Helicase, C-terminal YH65_06495 7d06994919e1629d8b8a4df24fa7d281 460 Pfam PF00270 DEAD/DEAH box helicase 26 190 1.3E-46 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 YH65_02420 8a0b636421cc0f8b3e45c3049750223a 805 Gene3D G3DSA:3.40.1110.10 517 626 3.1E-72 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 YH65_02420 8a0b636421cc0f8b3e45c3049750223a 805 SUPERFAMILY SSF81653 309 405 1.96E-20 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 YH65_02420 8a0b636421cc0f8b3e45c3049750223a 805 SUPERFAMILY SSF81665 272 772 5.49E-16 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 YH65_02420 8a0b636421cc0f8b3e45c3049750223a 805 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 5 85 1.0E-19 T 11-10-2018 IPR021993 Putative metal-binding domain of cation transport ATPase YH65_02420 8a0b636421cc0f8b3e45c3049750223a 805 PRINTS PR00942 Copper-transporting ATPase 1 signature 114 135 1.2E-8 T 11-10-2018 YH65_02420 8a0b636421cc0f8b3e45c3049750223a 805 PRINTS PR00942 Copper-transporting ATPase 1 signature 228 253 1.2E-8 T 11-10-2018 YH65_02420 8a0b636421cc0f8b3e45c3049750223a 805 PRINTS PR00942 Copper-transporting ATPase 1 signature 208 228 1.2E-8 T 11-10-2018 YH65_02420 8a0b636421cc0f8b3e45c3049750223a 805 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 356 370 4.1E-24 T 11-10-2018 YH65_02420 8a0b636421cc0f8b3e45c3049750223a 805 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 717 729 4.1E-24 T 11-10-2018 YH65_02420 8a0b636421cc0f8b3e45c3049750223a 805 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 641 651 4.1E-24 T 11-10-2018 YH65_02420 8a0b636421cc0f8b3e45c3049750223a 805 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 694 713 4.1E-24 T 11-10-2018 YH65_02420 8a0b636421cc0f8b3e45c3049750223a 805 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 506 520 4.1E-24 T 11-10-2018 YH65_02420 8a0b636421cc0f8b3e45c3049750223a 805 Gene3D G3DSA:3.40.50.1000 488 746 3.1E-72 T 11-10-2018 IPR023214 HAD superfamily YH65_02420 8a0b636421cc0f8b3e45c3049750223a 805 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 275 796 2.3E-113 T 11-10-2018 YH65_02420 8a0b636421cc0f8b3e45c3049750223a 805 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 508 514 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 YH65_02420 8a0b636421cc0f8b3e45c3049750223a 805 SUPERFAMILY SSF55008 86 159 4.71E-20 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 YH65_02420 8a0b636421cc0f8b3e45c3049750223a 805 SUPERFAMILY SSF56784 504 794 3.01E-53 T 11-10-2018 IPR036412 HAD-like superfamily YH65_02420 8a0b636421cc0f8b3e45c3049750223a 805 Pfam PF00702 haloacid dehalogenase-like hydrolase 503 708 5.9E-32 T 11-10-2018 YH65_02420 8a0b636421cc0f8b3e45c3049750223a 805 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 227 797 1.0E-148 T 11-10-2018 YH65_02420 8a0b636421cc0f8b3e45c3049750223a 805 Gene3D G3DSA:3.30.70.100 90 175 3.3E-15 T 11-10-2018 YH65_02420 8a0b636421cc0f8b3e45c3049750223a 805 Gene3D G3DSA:2.70.150.20 299 410 4.9E-27 T 11-10-2018 YH65_02420 8a0b636421cc0f8b3e45c3049750223a 805 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 278 776 1.9E-82 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 YH65_02420 8a0b636421cc0f8b3e45c3049750223a 805 PRINTS PR00943 Copper-transporting ATPase signature 135 155 4.3E-7 T 11-10-2018 YH65_02420 8a0b636421cc0f8b3e45c3049750223a 805 PRINTS PR00943 Copper-transporting ATPase signature 296 314 4.3E-7 T 11-10-2018 YH65_02420 8a0b636421cc0f8b3e45c3049750223a 805 PRINTS PR00943 Copper-transporting ATPase signature 429 443 4.3E-7 T 11-10-2018 YH65_02420 8a0b636421cc0f8b3e45c3049750223a 805 PRINTS PR00943 Copper-transporting ATPase signature 276 295 4.3E-7 T 11-10-2018 YH65_02420 8a0b636421cc0f8b3e45c3049750223a 805 PRINTS PR00943 Copper-transporting ATPase signature 671 688 4.3E-7 T 11-10-2018 YH65_02420 8a0b636421cc0f8b3e45c3049750223a 805 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 245 795 4.5E-162 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 YH65_02420 8a0b636421cc0f8b3e45c3049750223a 805 Pfam PF00403 Heavy-metal-associated domain 95 153 2.6E-13 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 YH65_02420 8a0b636421cc0f8b3e45c3049750223a 805 Pfam PF00122 E1-E2 ATPase 308 486 2.4E-50 T 11-10-2018 YH65_03635 863622a9f2e88950e2e0a2ca70364678 390 Pfam PF00909 Ammonium Transporter Family 11 383 1.6E-84 T 11-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 YH65_03635 863622a9f2e88950e2e0a2ca70364678 390 SUPERFAMILY SSF111352 5 363 1.22E-90 T 11-10-2018 YH65_03635 863622a9f2e88950e2e0a2ca70364678 390 Gene3D G3DSA:1.10.3430.10 2 389 9.9E-107 T 11-10-2018 IPR029020 Ammonium/urea transporter YH65_03025 07e2a1bc028148ff6afa1283c065ea31 282 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 167 187 - T 11-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 YH65_03025 07e2a1bc028148ff6afa1283c065ea31 282 SUPERFAMILY SSF109998 22 156 1.45E-20 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily YH65_03025 07e2a1bc028148ff6afa1283c065ea31 282 Pfam PF00639 PPIC-type PPIASE domain 139 227 3.2E-20 T 11-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 YH65_03025 07e2a1bc028148ff6afa1283c065ea31 282 Gene3D G3DSA:3.10.50.40 129 235 1.2E-35 T 11-10-2018 YH65_03025 07e2a1bc028148ff6afa1283c065ea31 282 SUPERFAMILY SSF54534 125 228 1.83E-26 T 11-10-2018 YH65_03025 07e2a1bc028148ff6afa1283c065ea31 282 Gene3D G3DSA:1.10.8.1040 23 83 5.7E-13 T 11-10-2018 YH65_03215 d3b1f90c95d27cafcff494e404f1312e 504 Gene3D G3DSA:2.40.30.20 3 95 9.6E-31 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 YH65_03215 d3b1f90c95d27cafcff494e404f1312e 504 Gene3D G3DSA:1.20.150.20 374 502 1.2E-49 T 11-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YH65_03215 d3b1f90c95d27cafcff494e404f1312e 504 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 151 366 4.2E-76 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 YH65_03215 d3b1f90c95d27cafcff494e404f1312e 504 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 3 503 51.601 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YH65_03215 d3b1f90c95d27cafcff494e404f1312e 504 SUPERFAMILY SSF52540 98 372 2.66E-101 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_03215 d3b1f90c95d27cafcff494e404f1312e 504 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 94 2.2E-13 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 YH65_03215 d3b1f90c95d27cafcff494e404f1312e 504 PIRSF PIRSF039088 3 504 1.8E-253 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YH65_03215 d3b1f90c95d27cafcff494e404f1312e 504 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 357 366 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 YH65_03215 d3b1f90c95d27cafcff494e404f1312e 504 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 373 498 1.2E-47 T 11-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YH65_03215 d3b1f90c95d27cafcff494e404f1312e 504 SUPERFAMILY SSF50615 12 95 9.42E-26 T 11-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 YH65_03215 d3b1f90c95d27cafcff494e404f1312e 504 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 5 503 4.3E-254 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YH65_03215 d3b1f90c95d27cafcff494e404f1312e 504 SUPERFAMILY SSF47917 374 502 5.23E-46 T 11-10-2018 YH65_03215 d3b1f90c95d27cafcff494e404f1312e 504 Gene3D G3DSA:3.40.50.300 96 373 7.9E-128 T 11-10-2018 YH65_02670 b6dae5682a79d85ffb753657b720c3d8 729 SMART SM00316 656 725 1.8E-14 T 11-10-2018 IPR022967 RNA-binding domain, S1 YH65_02670 b6dae5682a79d85ffb753657b720c3d8 729 SMART SM00322 580 646 9.7E-10 T 11-10-2018 IPR004087 K Homology domain GO:0003676 YH65_02670 b6dae5682a79d85ffb753657b720c3d8 729 SUPERFAMILY SSF54211 322 517 1.32E-43 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold YH65_02670 b6dae5682a79d85ffb753657b720c3d8 729 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 2 728 26.33 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 YH65_02670 b6dae5682a79d85ffb753657b720c3d8 729 SUPERFAMILY SSF55666 480 574 4.49E-20 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 YH65_02670 b6dae5682a79d85ffb753657b720c3d8 729 SUPERFAMILY SSF55666 145 250 1.96E-14 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 YH65_02670 b6dae5682a79d85ffb753657b720c3d8 729 SUPERFAMILY SSF50249 647 719 1.43E-15 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold YH65_02670 b6dae5682a79d85ffb753657b720c3d8 729 Gene3D G3DSA:2.40.50.140 653 726 1.6E-16 T 11-10-2018 YH65_02670 b6dae5682a79d85ffb753657b720c3d8 729 PIRSF PIRSF005499 1 729 4.9E-246 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 YH65_02670 b6dae5682a79d85ffb753657b720c3d8 729 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 219 722 3.7E-158 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 YH65_02670 b6dae5682a79d85ffb753657b720c3d8 729 Pfam PF03725 3' exoribonuclease family, domain 2 147 195 2.8E-8 T 11-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 YH65_02670 b6dae5682a79d85ffb753657b720c3d8 729 Pfam PF01138 3' exoribonuclease family, domain 1 353 485 1.3E-19 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 YH65_02670 b6dae5682a79d85ffb753657b720c3d8 729 Pfam PF01138 3' exoribonuclease family, domain 1 18 141 6.1E-13 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 YH65_02670 b6dae5682a79d85ffb753657b720c3d8 729 SUPERFAMILY SSF54791 583 676 2.48E-16 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 YH65_02670 b6dae5682a79d85ffb753657b720c3d8 729 Pfam PF00575 S1 RNA binding domain 656 714 1.2E-9 T 11-10-2018 IPR003029 S1 domain GO:0003676 YH65_02670 b6dae5682a79d85ffb753657b720c3d8 729 Pfam PF00013 KH domain 583 642 4.2E-9 T 11-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 YH65_02670 b6dae5682a79d85ffb753657b720c3d8 729 SUPERFAMILY SSF54211 6 141 8.6E-36 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold YH65_02670 b6dae5682a79d85ffb753657b720c3d8 729 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 272 349 1.0E-12 T 11-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 YH65_02670 b6dae5682a79d85ffb753657b720c3d8 729 Gene3D G3DSA:3.30.230.70 263 577 2.8E-102 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 YH65_02670 b6dae5682a79d85ffb753657b720c3d8 729 Gene3D G3DSA:3.30.1370.10 578 649 2.3E-15 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 YH65_09460 e9c993a41a2e66a07262f65750a55686 274 Gene3D G3DSA:3.30.1300.10 175 272 2.7E-26 T 11-10-2018 YH65_09460 e9c993a41a2e66a07262f65750a55686 274 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 2 274 1.5E-98 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 YH65_09460 e9c993a41a2e66a07262f65750a55686 274 Gene3D G3DSA:3.40.50.620 1 174 8.3E-65 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YH65_09460 e9c993a41a2e66a07262f65750a55686 274 SUPERFAMILY SSF52374 1 274 1.4E-93 T 11-10-2018 YH65_09460 e9c993a41a2e66a07262f65750a55686 274 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 23 59 2.8E-10 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 YH65_09460 e9c993a41a2e66a07262f65750a55686 274 Pfam PF02569 Pantoate-beta-alanine ligase 3 272 4.5E-93 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 YH65_09460 e9c993a41a2e66a07262f65750a55686 274 Hamap MF_00158 Pantothenate synthetase [panC]. 2 274 35.919 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 YH65_10470 dda3be4c850cd15a13af4bc3f9dc2c6d 63 PRINTS PR00064 Ribosomal protein L35 signature 21 35 1.8E-11 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 YH65_10470 dda3be4c850cd15a13af4bc3f9dc2c6d 63 PRINTS PR00064 Ribosomal protein L35 signature 36 54 1.8E-11 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 YH65_10470 dda3be4c850cd15a13af4bc3f9dc2c6d 63 PRINTS PR00064 Ribosomal protein L35 signature 3 20 1.8E-11 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 YH65_10470 dda3be4c850cd15a13af4bc3f9dc2c6d 63 Gene3D G3DSA:2.40.50.530 1 63 2.5E-16 T 11-10-2018 YH65_10470 dda3be4c850cd15a13af4bc3f9dc2c6d 63 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 63 15.165 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 YH65_10470 dda3be4c850cd15a13af4bc3f9dc2c6d 63 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 62 4.5E-20 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 YH65_10470 dda3be4c850cd15a13af4bc3f9dc2c6d 63 SUPERFAMILY SSF143034 2 62 3.53E-19 T 11-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_10470 dda3be4c850cd15a13af4bc3f9dc2c6d 63 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 11-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YH65_10470 dda3be4c850cd15a13af4bc3f9dc2c6d 63 Pfam PF01632 Ribosomal protein L35 2 61 3.5E-20 T 11-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_00415 ee3856dabc688cb622ae6eb5b4707d7c 608 Gene3D G3DSA:1.10.274.10 135 232 1.2E-20 T 11-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 YH65_00415 ee3856dabc688cb622ae6eb5b4707d7c 608 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 16 91 2.9E-16 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like YH65_00415 ee3856dabc688cb622ae6eb5b4707d7c 608 PRINTS PR00107 Phosphocarrier protein signature 63 80 2.8E-10 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like YH65_00415 ee3856dabc688cb622ae6eb5b4707d7c 608 PRINTS PR00107 Phosphocarrier protein signature 23 39 2.8E-10 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like YH65_00415 ee3856dabc688cb622ae6eb5b4707d7c 608 PRINTS PR00107 Phosphocarrier protein signature 48 63 2.8E-10 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like YH65_00415 ee3856dabc688cb622ae6eb5b4707d7c 608 Gene3D G3DSA:3.50.30.10 122 314 1.2E-20 T 11-10-2018 YH65_00415 ee3856dabc688cb622ae6eb5b4707d7c 608 Gene3D G3DSA:3.30.1340.10 12 94 6.0E-22 T 11-10-2018 IPR035895 HPr-like superfamily YH65_00415 ee3856dabc688cb622ae6eb5b4707d7c 608 SUPERFAMILY SSF52009 212 324 4.97E-14 T 11-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 YH65_00415 ee3856dabc688cb622ae6eb5b4707d7c 608 SUPERFAMILY SSF55594 16 92 1.57E-17 T 11-10-2018 IPR035895 HPr-like superfamily YH65_00415 ee3856dabc688cb622ae6eb5b4707d7c 608 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 339 607 3.9E-81 T 11-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 YH65_00415 ee3856dabc688cb622ae6eb5b4707d7c 608 SUPERFAMILY SSF51621 337 607 2.71E-78 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 YH65_00415 ee3856dabc688cb622ae6eb5b4707d7c 608 Pfam PF00391 PEP-utilising enzyme, mobile domain 239 306 6.0E-10 T 11-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 YH65_00415 ee3856dabc688cb622ae6eb5b4707d7c 608 Pfam PF00381 PTS HPr component phosphorylation site 17 91 4.2E-20 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like YH65_00415 ee3856dabc688cb622ae6eb5b4707d7c 608 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 374 393 4.7E-8 T 11-10-2018 YH65_00415 ee3856dabc688cb622ae6eb5b4707d7c 608 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 520 535 4.7E-8 T 11-10-2018 YH65_00415 ee3856dabc688cb622ae6eb5b4707d7c 608 Gene3D G3DSA:3.20.20.60 315 608 5.7E-89 T 11-10-2018 YH65_07385 c8c60a3f49fbb64733b98bee29fa7f20 577 Pfam PF14493 Helix-turn-helix domain 469 569 1.2E-12 T 11-10-2018 IPR029491 Helicase Helix-turn-helix domain Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 YH65_07385 c8c60a3f49fbb64733b98bee29fa7f20 577 Gene3D G3DSA:3.40.50.300 1 190 5.0E-33 T 11-10-2018 YH65_07385 c8c60a3f49fbb64733b98bee29fa7f20 577 SUPERFAMILY SSF52540 3 190 1.35E-24 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_07385 c8c60a3f49fbb64733b98bee29fa7f20 577 Pfam PF05970 PIF1-like helicase 11 298 8.1E-45 T 11-10-2018 IPR010285 DNA helicase Pif1-like GO:0000723|GO:0003678|GO:0006281 YH65_07385 c8c60a3f49fbb64733b98bee29fa7f20 577 SUPERFAMILY SSF52540 124 396 1.83E-34 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_07385 c8c60a3f49fbb64733b98bee29fa7f20 577 SMART SM00382 12 321 0.002 T 11-10-2018 IPR003593 AAA+ ATPase domain YH65_03750 948883e4ca6491ef59bd739769731d3b 840 Gene3D G3DSA:3.30.1360.40 239 334 4.5E-213 T 11-10-2018 YH65_03750 948883e4ca6491ef59bd739769731d3b 840 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 35 473 1.2E-160 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 YH65_03750 948883e4ca6491ef59bd739769731d3b 840 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 613 656 3.4E-13 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 YH65_03750 948883e4ca6491ef59bd739769731d3b 840 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 661 695 1.3E-7 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 YH65_03750 948883e4ca6491ef59bd739769731d3b 840 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 712 759 2.6E-14 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 YH65_03750 948883e4ca6491ef59bd739769731d3b 840 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 506 550 4.8E-10 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 YH65_03750 948883e4ca6491ef59bd739769731d3b 840 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 764 808 6.4E-9 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 YH65_03750 948883e4ca6491ef59bd739769731d3b 840 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 555 604 5.6E-9 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 YH65_03750 948883e4ca6491ef59bd739769731d3b 840 Gene3D G3DSA:1.10.268.10 371 467 4.5E-213 T 11-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 YH65_03750 948883e4ca6491ef59bd739769731d3b 840 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 12 810 0.0 T 11-10-2018 YH65_03750 948883e4ca6491ef59bd739769731d3b 840 Gene3D G3DSA:3.90.199.10 36 488 4.5E-213 T 11-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 YH65_03750 948883e4ca6491ef59bd739769731d3b 840 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 12 695 3.7E-190 T 11-10-2018 YH65_03750 948883e4ca6491ef59bd739769731d3b 840 SMART SM00434 14 466 2.9E-282 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 YH65_03750 948883e4ca6491ef59bd739769731d3b 840 Gene3D G3DSA:2.120.10.90 497 811 1.0E-118 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal YH65_03750 948883e4ca6491ef59bd739769731d3b 840 SUPERFAMILY SSF56719 34 489 2.62E-179 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 YH65_03750 948883e4ca6491ef59bd739769731d3b 840 SUPERFAMILY SSF101904 500 820 3.79E-106 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal YH65_03750 948883e4ca6491ef59bd739769731d3b 840 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 8 811 24.465 T 11-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YH65_10170 354eb93827825dfad9510544fc0a99f6 346 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 96 107 - T 11-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 YH65_10170 354eb93827825dfad9510544fc0a99f6 346 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 3 312 1.8E-84 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 YH65_10170 354eb93827825dfad9510544fc0a99f6 346 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 275 302 - T 11-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 YH65_10170 354eb93827825dfad9510544fc0a99f6 346 Gene3D G3DSA:3.40.50.20 1 118 8.3E-32 T 11-10-2018 YH65_10170 354eb93827825dfad9510544fc0a99f6 346 Pfam PF07478 D-ala D-ala ligase C-terminus 137 310 5.9E-34 T 11-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 YH65_10170 354eb93827825dfad9510544fc0a99f6 346 SUPERFAMILY SSF56059 129 311 1.77E-34 T 11-10-2018 YH65_10170 354eb93827825dfad9510544fc0a99f6 346 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 1 331 28.713 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 YH65_10170 354eb93827825dfad9510544fc0a99f6 346 Gene3D G3DSA:3.30.1490.20 146 205 3.7E-54 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 YH65_10170 354eb93827825dfad9510544fc0a99f6 346 SUPERFAMILY SSF52440 1 128 4.32E-27 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily YH65_10170 354eb93827825dfad9510544fc0a99f6 346 Gene3D G3DSA:3.30.470.20 124 303 3.7E-54 T 11-10-2018 YH65_10170 354eb93827825dfad9510544fc0a99f6 346 Pfam PF01820 D-ala D-ala ligase N-terminus 2 118 6.0E-21 T 11-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 YH65_01980 b8f0f2a912b72d73fef067170683bd05 992 Gene3D G3DSA:3.40.50.300 417 654 2.6E-199 T 11-10-2018 YH65_01980 b8f0f2a912b72d73fef067170683bd05 992 SMART SM00982 876 972 3.1E-28 T 11-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 YH65_01980 b8f0f2a912b72d73fef067170683bd05 992 Gene3D G3DSA:3.90.1150.50 872 982 3.7E-20 T 11-10-2018 IPR037235 TRCF-like, C-terminal domain YH65_01980 b8f0f2a912b72d73fef067170683bd05 992 Pfam PF00271 Helicase conserved C-terminal domain 678 783 3.4E-17 T 11-10-2018 IPR001650 Helicase, C-terminal YH65_01980 b8f0f2a912b72d73fef067170683bd05 992 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 319 949 2.2E-254 T 11-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 YH65_01980 b8f0f2a912b72d73fef067170683bd05 992 SUPERFAMILY SSF141259 352 423 3.92E-20 T 11-10-2018 IPR036101 CarD-like/TRCF domain superfamily YH65_01980 b8f0f2a912b72d73fef067170683bd05 992 SMART SM00490 700 783 1.8E-18 T 11-10-2018 IPR001650 Helicase, C-terminal YH65_01980 b8f0f2a912b72d73fef067170683bd05 992 SUPERFAMILY SSF143517 861 985 5.75E-26 T 11-10-2018 IPR037235 TRCF-like, C-terminal domain YH65_01980 b8f0f2a912b72d73fef067170683bd05 992 Gene3D G3DSA:3.40.50.300 353 862 2.6E-199 T 11-10-2018 YH65_01980 b8f0f2a912b72d73fef067170683bd05 992 Pfam PF03461 TRCF domain 877 965 1.3E-19 T 11-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 YH65_01980 b8f0f2a912b72d73fef067170683bd05 992 Gene3D G3DSA:2.30.30.840 358 416 2.6E-199 T 11-10-2018 YH65_01980 b8f0f2a912b72d73fef067170683bd05 992 Gene3D G3DSA:3.40.50.11180 11 206 2.5E-29 T 11-10-2018 YH65_01980 b8f0f2a912b72d73fef067170683bd05 992 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 10 974 24.055 T 11-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 YH65_01980 b8f0f2a912b72d73fef067170683bd05 992 Pfam PF00270 DEAD/DEAH box helicase 480 637 1.7E-16 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 YH65_01980 b8f0f2a912b72d73fef067170683bd05 992 SUPERFAMILY SSF52540 6 209 2.39E-36 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_01980 b8f0f2a912b72d73fef067170683bd05 992 SMART SM00487 474 669 4.7E-29 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain YH65_01980 b8f0f2a912b72d73fef067170683bd05 992 SMART SM01058 354 451 3.0E-38 T 11-10-2018 IPR003711 CarD-like/TRCF domain YH65_01980 b8f0f2a912b72d73fef067170683bd05 992 SUPERFAMILY SSF52540 526 797 2.7E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_01980 b8f0f2a912b72d73fef067170683bd05 992 Gene3D G3DSA:3.30.2060.10 103 187 2.5E-29 T 11-10-2018 YH65_01980 b8f0f2a912b72d73fef067170683bd05 992 Pfam PF02559 CarD-like/TRCF domain 355 449 1.6E-22 T 11-10-2018 IPR003711 CarD-like/TRCF domain YH65_05575 a5ef4dd62f83e1d65041f13783fd2238 341 Gene3D G3DSA:3.20.20.100 1 341 9.6E-108 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily YH65_05575 a5ef4dd62f83e1d65041f13783fd2238 341 Pfam PF00248 Aldo/keto reductase family 15 332 9.1E-69 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain YH65_05575 a5ef4dd62f83e1d65041f13783fd2238 341 SUPERFAMILY SSF51430 1 338 4.98E-93 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily YH65_03490 f47de4c9df0208343a786fe24559019e 147 Gene3D G3DSA:1.10.1510.10 1 90 7.3E-25 T 11-10-2018 YH65_03490 f47de4c9df0208343a786fe24559019e 147 Gene3D G3DSA:1.10.10.410 91 146 3.3E-20 T 11-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal YH65_03490 f47de4c9df0208343a786fe24559019e 147 SUPERFAMILY SSF89095 1 146 2.62E-40 T 11-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 YH65_03490 f47de4c9df0208343a786fe24559019e 147 Pfam PF09424 Yqey-like protein 4 146 1.4E-49 T 11-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 YH65_09200 549bbe11e3a6595a5e90c47dda9985a7 323 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 38 283 1.3E-85 T 11-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 YH65_09200 549bbe11e3a6595a5e90c47dda9985a7 323 Pfam PF07549 SecD/SecF GG Motif 33 56 7.4E-11 T 11-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site YH65_09200 549bbe11e3a6595a5e90c47dda9985a7 323 PRINTS PR01755 Bacterial translocase SecF protein signature 37 52 9.5E-33 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial YH65_09200 549bbe11e3a6595a5e90c47dda9985a7 323 PRINTS PR01755 Bacterial translocase SecF protein signature 231 246 9.5E-33 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial YH65_09200 549bbe11e3a6595a5e90c47dda9985a7 323 PRINTS PR01755 Bacterial translocase SecF protein signature 151 165 9.5E-33 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial YH65_09200 549bbe11e3a6595a5e90c47dda9985a7 323 PRINTS PR01755 Bacterial translocase SecF protein signature 199 217 9.5E-33 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial YH65_09200 549bbe11e3a6595a5e90c47dda9985a7 323 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 116 280 1.6E-56 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial YH65_09200 549bbe11e3a6595a5e90c47dda9985a7 323 SUPERFAMILY SSF82866 75 291 1.44E-41 T 11-10-2018 YH65_09200 549bbe11e3a6595a5e90c47dda9985a7 323 Pfam PF02355 Protein export membrane protein 108 291 6.8E-70 T 11-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial YH65_09200 549bbe11e3a6595a5e90c47dda9985a7 323 Gene3D G3DSA:1.20.1640.10 106 305 4.5E-14 T 11-10-2018 YH65_09200 549bbe11e3a6595a5e90c47dda9985a7 323 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 10 294 27.59 T 11-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 YH65_07160 b71d7e1c35dfb0f7f6fcf2cf01e32266 510 SUPERFAMILY SSF52335 2 191 1.54E-65 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily YH65_07160 b71d7e1c35dfb0f7f6fcf2cf01e32266 510 SUPERFAMILY SSF53927 203 510 3.11E-109 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 YH65_07160 b71d7e1c35dfb0f7f6fcf2cf01e32266 510 Pfam PF02142 MGS-like domain 12 126 2.7E-24 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain YH65_07160 b71d7e1c35dfb0f7f6fcf2cf01e32266 510 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 1 510 38.675 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 YH65_07160 b71d7e1c35dfb0f7f6fcf2cf01e32266 510 Gene3D G3DSA:3.40.140.20 199 353 4.2E-57 T 11-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 YH65_07160 b71d7e1c35dfb0f7f6fcf2cf01e32266 510 Gene3D G3DSA:3.40.50.1380 1 192 7.3E-82 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily YH65_07160 b71d7e1c35dfb0f7f6fcf2cf01e32266 510 PIRSF PIRSF000414 1 510 2.7E-192 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 YH65_07160 b71d7e1c35dfb0f7f6fcf2cf01e32266 510 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 2 510 2.5E-165 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 YH65_07160 b71d7e1c35dfb0f7f6fcf2cf01e32266 510 SMART SM00851 12 126 2.9E-49 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain YH65_07160 b71d7e1c35dfb0f7f6fcf2cf01e32266 510 Gene3D G3DSA:3.40.140.20 372 510 1.1E-53 T 11-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 YH65_07160 b71d7e1c35dfb0f7f6fcf2cf01e32266 510 SMART SM00798 131 442 2.2E-145 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 YH65_07160 b71d7e1c35dfb0f7f6fcf2cf01e32266 510 Pfam PF01808 AICARFT/IMPCHase bienzyme 131 441 5.4E-97 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 YH65_09960 6606a02fac5f968daf4b38268f03f3a3 405 Gene3D G3DSA:3.90.105.10 21 167 1.3E-113 T 11-10-2018 YH65_09960 6606a02fac5f968daf4b38268f03f3a3 405 Pfam PF00994 Probable molybdopterin binding domain 174 309 1.0E-24 T 11-10-2018 IPR001453 MoaB/Mog domain YH65_09960 6606a02fac5f968daf4b38268f03f3a3 405 Gene3D G3DSA:2.170.190.11 45 134 1.3E-113 T 11-10-2018 YH65_09960 6606a02fac5f968daf4b38268f03f3a3 405 SUPERFAMILY SSF53218 170 314 5.89E-36 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily YH65_09960 6606a02fac5f968daf4b38268f03f3a3 405 Gene3D G3DSA:3.40.980.10 168 319 1.3E-113 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily YH65_09960 6606a02fac5f968daf4b38268f03f3a3 405 SUPERFAMILY SSF63867 323 390 4.97E-6 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 YH65_09960 6606a02fac5f968daf4b38268f03f3a3 405 Pfam PF03453 MoeA N-terminal region (domain I and II) 3 160 2.3E-43 T 11-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 YH65_09960 6606a02fac5f968daf4b38268f03f3a3 405 SMART SM00852 173 310 3.6E-34 T 11-10-2018 IPR001453 MoaB/Mog domain YH65_09960 6606a02fac5f968daf4b38268f03f3a3 405 Gene3D G3DSA:2.40.340.10 320 385 1.3E-113 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 YH65_09960 6606a02fac5f968daf4b38268f03f3a3 405 Pfam PF03454 MoeA C-terminal region (domain IV) 344 389 2.5E-5 T 11-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 YH65_09960 6606a02fac5f968daf4b38268f03f3a3 405 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 169 305 1.5E-27 T 11-10-2018 IPR001453 MoaB/Mog domain YH65_09960 6606a02fac5f968daf4b38268f03f3a3 405 SUPERFAMILY SSF63882 3 169 1.44E-49 T 11-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 YH65_10265 e15987c4630cefff070e74b8087e637e 288 Hamap MF_00996 1,4-dihydroxy-6-naphtoate synthase [mqnD]. 4 268 35.179 T 11-10-2018 IPR030869 1,4-dihydroxy-6-naphtoate synthase GO:0009234|GO:0016829 YH65_10265 e15987c4630cefff070e74b8087e637e 288 Gene3D G3DSA:3.40.190.10 82 175 3.1E-65 T 11-10-2018 YH65_10265 e15987c4630cefff070e74b8087e637e 288 Pfam PF02621 Menaquinone biosynthesis 5 261 1.4E-72 T 11-10-2018 IPR003773 Menaquinone biosynthesis enzyme YH65_10265 e15987c4630cefff070e74b8087e637e 288 SUPERFAMILY SSF53850 5 266 4.46E-72 T 11-10-2018 YH65_10265 e15987c4630cefff070e74b8087e637e 288 Gene3D G3DSA:3.40.190.10 7 259 3.1E-65 T 11-10-2018 YH65_07000 9d2427a5b5a902445a2fd76d0b461095 378 Pfam PF01098 Cell cycle protein 17 355 2.8E-82 T 11-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 YH65_08360 86aa5184545112c704e7fc9103b56384 542 SUPERFAMILY SSF82693 154 339 1.57E-5 T 11-10-2018 YH65_08360 86aa5184545112c704e7fc9103b56384 542 Gene3D G3DSA:1.20.1640.10 25 535 9.8E-117 T 11-10-2018 YH65_08360 86aa5184545112c704e7fc9103b56384 542 SUPERFAMILY SSF82714 198 281 1.7E-9 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YH65_08360 86aa5184545112c704e7fc9103b56384 542 Gene3D G3DSA:3.30.2090.10 194 289 9.8E-117 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YH65_08360 86aa5184545112c704e7fc9103b56384 542 SUPERFAMILY SSF82866 319 522 7.46E-35 T 11-10-2018 YH65_08360 86aa5184545112c704e7fc9103b56384 542 Gene3D G3DSA:3.30.70.1320 146 353 9.8E-117 T 11-10-2018 YH65_08360 86aa5184545112c704e7fc9103b56384 542 Gene3D G3DSA:3.30.70.1430 52 145 9.8E-117 T 11-10-2018 YH65_08360 86aa5184545112c704e7fc9103b56384 542 PRINTS PR00702 Acriflavin resistance protein family signature 359 382 6.7E-23 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_08360 86aa5184545112c704e7fc9103b56384 542 PRINTS PR00702 Acriflavin resistance protein family signature 495 518 6.7E-23 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_08360 86aa5184545112c704e7fc9103b56384 542 PRINTS PR00702 Acriflavin resistance protein family signature 22 46 6.7E-23 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_08360 86aa5184545112c704e7fc9103b56384 542 PRINTS PR00702 Acriflavin resistance protein family signature 50 68 6.7E-23 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_08360 86aa5184545112c704e7fc9103b56384 542 PRINTS PR00702 Acriflavin resistance protein family signature 413 437 6.7E-23 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_08360 86aa5184545112c704e7fc9103b56384 542 SUPERFAMILY SSF82693 59 146 1.18E-16 T 11-10-2018 YH65_08360 86aa5184545112c704e7fc9103b56384 542 Pfam PF00873 AcrB/AcrD/AcrF family 20 531 1.3E-75 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_10510 1231081e8285a5087121a6d649ec0a37 566 SUPERFAMILY SSF141523 309 469 5.75E-18 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like YH65_10510 1231081e8285a5087121a6d649ec0a37 566 Pfam PF03734 L,D-transpeptidase catalytic domain 312 478 9.1E-28 T 11-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 YH65_10510 1231081e8285a5087121a6d649ec0a37 566 SUPERFAMILY SSF47090 214 289 1.49E-13 T 11-10-2018 IPR036365 PGBD-like superfamily YH65_10510 1231081e8285a5087121a6d649ec0a37 566 Pfam PF01471 Putative peptidoglycan binding domain 230 281 7.6E-9 T 11-10-2018 IPR002477 Peptidoglycan binding-like YH65_07490 0a9f077477f4f865dffc8d6bd68d150d 533 SUPERFAMILY SSF51338 5 325 1.25E-5 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 YH65_07490 0a9f077477f4f865dffc8d6bd68d150d 533 SUPERFAMILY SSF51556 44 286 1.51E-28 T 11-10-2018 IPR032466 Metal-dependent hydrolase YH65_07490 0a9f077477f4f865dffc8d6bd68d150d 533 Gene3D G3DSA:2.30.40.10 6 321 1.2E-94 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 YH65_07490 0a9f077477f4f865dffc8d6bd68d150d 533 Pfam PF01979 Amidohydrolase family 40 320 1.4E-28 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 YH65_07490 0a9f077477f4f865dffc8d6bd68d150d 533 Hamap MF_01518 Adenine deaminase [ade]. 2 529 33.624 T 11-10-2018 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 YH65_07490 0a9f077477f4f865dffc8d6bd68d150d 533 Pfam PF13382 Adenine deaminase C-terminal domain 378 525 2.7E-56 T 11-10-2018 IPR026912 Adenine deaminase C-terminal domain KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 YH65_07490 0a9f077477f4f865dffc8d6bd68d150d 533 TIGRFAM TIGR01178 ade: adenine deaminase 4 529 7.0E-186 T 11-10-2018 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 YH65_07490 0a9f077477f4f865dffc8d6bd68d150d 533 Gene3D G3DSA:3.20.20.140 44 285 1.2E-94 T 11-10-2018 YH65_00455 3e8a1c82e0088c615f928dfb8bf9b948 409 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 22 409 9.7E-181 T 11-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_00455 3e8a1c82e0088c615f928dfb8bf9b948 409 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 136 409 4.0E-106 T 11-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_00455 3e8a1c82e0088c615f928dfb8bf9b948 409 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 17 409 45.08 T 11-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_00455 3e8a1c82e0088c615f928dfb8bf9b948 409 Gene3D G3DSA:1.10.645.20 21 409 7.0E-153 T 11-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_00455 3e8a1c82e0088c615f928dfb8bf9b948 409 SUPERFAMILY SSF56762 32 409 7.06E-127 T 11-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_01800 721528aa5fe2f39ad5126c8271077b0c 196 Gene3D G3DSA:3.40.50.150 1 196 4.4E-47 T 11-10-2018 YH65_01800 721528aa5fe2f39ad5126c8271077b0c 196 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 11 192 23.839 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 YH65_01800 721528aa5fe2f39ad5126c8271077b0c 196 SUPERFAMILY SSF53335 6 174 1.33E-25 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YH65_01800 721528aa5fe2f39ad5126c8271077b0c 196 Pfam PF02527 rRNA small subunit methyltransferase G 20 185 4.7E-41 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 YH65_01800 721528aa5fe2f39ad5126c8271077b0c 196 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 25 182 6.1E-41 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 YH65_01800 721528aa5fe2f39ad5126c8271077b0c 196 PIRSF PIRSF003078 2 196 9.4E-47 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 YH65_05030 1105167aff6fa6f1983d16d299e0ef9e 202 SUPERFAMILY SSF51306 2 173 4.19E-33 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily YH65_05030 1105167aff6fa6f1983d16d299e0ef9e 202 Pfam PF00717 Peptidase S24-like 6 65 1.7E-11 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C YH65_05030 1105167aff6fa6f1983d16d299e0ef9e 202 Gene3D G3DSA:2.10.109.10 4 166 5.0E-26 T 11-10-2018 YH65_05030 1105167aff6fa6f1983d16d299e0ef9e 202 Gene3D G3DSA:2.170.230.10 61 129 5.0E-26 T 11-10-2018 YH65_05030 1105167aff6fa6f1983d16d299e0ef9e 202 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 2 167 2.7E-24 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 YH65_05030 1105167aff6fa6f1983d16d299e0ef9e 202 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 50 62 1.5E-8 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 YH65_05030 1105167aff6fa6f1983d16d299e0ef9e 202 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 130 149 1.5E-8 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 YH65_01875 7c9f22fbb6ecd674015e3dd01f5d8162 361 Pfam PF03739 Predicted permease YjgP/YjgQ family 12 353 9.4E-42 T 11-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 YH65_07590 095ba75e886e8eb09d56a913dff58bba 332 Pfam PF00535 Glycosyl transferase family 2 8 152 1.0E-34 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 YH65_07590 095ba75e886e8eb09d56a913dff58bba 332 Gene3D G3DSA:3.90.550.10 2 211 2.1E-52 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YH65_07590 095ba75e886e8eb09d56a913dff58bba 332 SUPERFAMILY SSF53448 5 228 1.48E-54 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YH65_08795 20274c46f67e5ea965258cc6838837e9 352 Gene3D G3DSA:3.40.50.300 103 352 1.2E-97 T 11-10-2018 YH65_08795 20274c46f67e5ea965258cc6838837e9 352 Gene3D G3DSA:3.30.450.90 1 102 4.9E-34 T 11-10-2018 YH65_08795 20274c46f67e5ea965258cc6838837e9 352 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 196 210 - T 11-10-2018 IPR001482 Type II/IV secretion system protein YH65_08795 20274c46f67e5ea965258cc6838837e9 352 SMART SM00382 125 250 4.1E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain YH65_08795 20274c46f67e5ea965258cc6838837e9 352 Pfam PF00437 Type II/IV secretion system protein 12 271 6.3E-44 T 11-10-2018 IPR001482 Type II/IV secretion system protein YH65_08795 20274c46f67e5ea965258cc6838837e9 352 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 6 347 4.8E-139 T 11-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 YH65_08795 20274c46f67e5ea965258cc6838837e9 352 SUPERFAMILY SSF52540 7 338 2.05E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_01465 a9a8cbafd310ebcbf03ada68b06260ab 201 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 8 191 3.1E-81 T 11-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 YH65_01465 a9a8cbafd310ebcbf03ada68b06260ab 201 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 24 196 37.586 T 11-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 YH65_01465 a9a8cbafd310ebcbf03ada68b06260ab 201 Gene3D G3DSA:3.40.50.300 2 200 5.3E-84 T 11-10-2018 YH65_01465 a9a8cbafd310ebcbf03ada68b06260ab 201 SUPERFAMILY SSF52540 22 195 5.32E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_01465 a9a8cbafd310ebcbf03ada68b06260ab 201 Pfam PF01583 Adenylylsulphate kinase 25 179 6.3E-72 T 11-10-2018 YH65_06235 22487c44bab62bc12876fb877d81471e 137 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 7 126 3.3E-20 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I YH65_06235 22487c44bab62bc12876fb877d81471e 137 SUPERFAMILY SSF52788 4 130 3.92E-35 T 11-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily YH65_06235 22487c44bab62bc12876fb877d81471e 137 SMART SM00226 5 133 7.1E-30 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I YH65_06235 22487c44bab62bc12876fb877d81471e 137 Gene3D G3DSA:3.40.50.2300 2 130 1.0E-35 T 11-10-2018 YH65_05865 59ff5d5e205ce1e4c53de9b4057809dd 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 136 145 8.0E-51 T 11-10-2018 YH65_05865 59ff5d5e205ce1e4c53de9b4057809dd 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 260 274 8.0E-51 T 11-10-2018 YH65_05865 59ff5d5e205ce1e4c53de9b4057809dd 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 172 197 8.0E-51 T 11-10-2018 YH65_05865 59ff5d5e205ce1e4c53de9b4057809dd 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 338 359 8.0E-51 T 11-10-2018 YH65_05865 59ff5d5e205ce1e4c53de9b4057809dd 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 302 309 8.0E-51 T 11-10-2018 YH65_05865 59ff5d5e205ce1e4c53de9b4057809dd 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 8.0E-51 T 11-10-2018 YH65_05865 59ff5d5e205ce1e4c53de9b4057809dd 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 403 418 8.0E-51 T 11-10-2018 YH65_05865 59ff5d5e205ce1e4c53de9b4057809dd 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 8.0E-51 T 11-10-2018 YH65_05865 59ff5d5e205ce1e4c53de9b4057809dd 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 425 445 8.0E-51 T 11-10-2018 YH65_05865 59ff5d5e205ce1e4c53de9b4057809dd 464 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 344 449 7.7E-27 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 YH65_05865 59ff5d5e205ce1e4c53de9b4057809dd 464 Gene3D G3DSA:3.30.390.30 341 462 2.5E-31 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 YH65_05865 59ff5d5e205ce1e4c53de9b4057809dd 464 Gene3D G3DSA:3.50.50.60 145 266 3.0E-95 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_05865 59ff5d5e205ce1e4c53de9b4057809dd 464 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 322 8.1E-61 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YH65_05865 59ff5d5e205ce1e4c53de9b4057809dd 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.2E-24 T 11-10-2018 YH65_05865 59ff5d5e205ce1e4c53de9b4057809dd 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 133 151 1.2E-24 T 11-10-2018 YH65_05865 59ff5d5e205ce1e4c53de9b4057809dd 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 172 190 1.2E-24 T 11-10-2018 YH65_05865 59ff5d5e205ce1e4c53de9b4057809dd 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 287 309 1.2E-24 T 11-10-2018 YH65_05865 59ff5d5e205ce1e4c53de9b4057809dd 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 259 275 1.2E-24 T 11-10-2018 YH65_05865 59ff5d5e205ce1e4c53de9b4057809dd 464 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 11-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 YH65_05865 59ff5d5e205ce1e4c53de9b4057809dd 464 SUPERFAMILY SSF55424 343 457 1.07E-27 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 YH65_05865 59ff5d5e205ce1e4c53de9b4057809dd 464 SUPERFAMILY SSF51905 1 365 9.72E-54 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_05865 59ff5d5e205ce1e4c53de9b4057809dd 464 PIRSF PIRSF000350 1 462 4.6E-85 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 YH65_05865 59ff5d5e205ce1e4c53de9b4057809dd 464 Gene3D G3DSA:3.50.50.60 4 328 3.0E-95 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_00355 db22314268d70edf67f7c1f225747140 295 Pfam PF00072 Response regulator receiver domain 7 117 1.1E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YH65_00355 db22314268d70edf67f7c1f225747140 295 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 130 288 8.1E-41 T 11-10-2018 IPR000160 GGDEF domain YH65_00355 db22314268d70edf67f7c1f225747140 295 Pfam PF00990 Diguanylate cyclase, GGDEF domain 134 286 3.3E-39 T 11-10-2018 IPR000160 GGDEF domain YH65_00355 db22314268d70edf67f7c1f225747140 295 SMART SM00448 5 117 7.2E-38 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YH65_00355 db22314268d70edf67f7c1f225747140 295 SUPERFAMILY SSF55073 139 289 1.57E-42 T 11-10-2018 IPR029787 Nucleotide cyclase YH65_00355 db22314268d70edf67f7c1f225747140 295 Gene3D G3DSA:3.40.50.2300 1 132 2.4E-38 T 11-10-2018 YH65_00355 db22314268d70edf67f7c1f225747140 295 SMART SM00267 123 290 1.7E-53 T 11-10-2018 IPR000160 GGDEF domain YH65_00355 db22314268d70edf67f7c1f225747140 295 Gene3D G3DSA:3.30.70.270 133 292 1.9E-48 T 11-10-2018 YH65_00355 db22314268d70edf67f7c1f225747140 295 SUPERFAMILY SSF52172 3 129 1.85E-38 T 11-10-2018 IPR011006 CheY-like superfamily YH65_00475 149350f3c99baf4d80ae571d3655fefc 820 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 210 221 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YH65_00475 149350f3c99baf4d80ae571d3655fefc 820 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 83 121 3.2E-15 T 11-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_00475 149350f3c99baf4d80ae571d3655fefc 820 Pfam PF12838 4Fe-4S dicluster domain 146 224 1.1E-8 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YH65_00475 149350f3c99baf4d80ae571d3655fefc 820 Gene3D G3DSA:3.30.70.20 125 228 1.3E-11 T 11-10-2018 YH65_00475 149350f3c99baf4d80ae571d3655fefc 820 SMART SM00929 83 123 3.4E-18 T 11-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_00475 149350f3c99baf4d80ae571d3655fefc 820 Gene3D G3DSA:3.10.20.740 3 124 5.4E-36 T 11-10-2018 YH65_00475 149350f3c99baf4d80ae571d3655fefc 820 SUPERFAMILY SSF54862 75 232 1.38E-28 T 11-10-2018 YH65_00475 149350f3c99baf4d80ae571d3655fefc 820 SUPERFAMILY SSF54292 3 73 4.41E-16 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 YH65_00475 149350f3c99baf4d80ae571d3655fefc 820 SUPERFAMILY SSF53706 237 653 1.41E-13 T 11-10-2018 YH65_00475 149350f3c99baf4d80ae571d3655fefc 820 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 76 1.4E-15 T 11-10-2018 YH65_00590 f2a174982430393e1fdc3008abb0f0c3 331 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 323 3.0E-119 T 11-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YH65_00590 f2a174982430393e1fdc3008abb0f0c3 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 170 186 2.1E-34 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 YH65_00590 f2a174982430393e1fdc3008abb0f0c3 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 267 282 2.1E-34 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 YH65_00590 f2a174982430393e1fdc3008abb0f0c3 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 108 121 2.1E-34 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 YH65_00590 f2a174982430393e1fdc3008abb0f0c3 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 227 244 2.1E-34 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 YH65_00590 f2a174982430393e1fdc3008abb0f0c3 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 143 161 2.1E-34 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 YH65_00590 f2a174982430393e1fdc3008abb0f0c3 331 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 154 311 9.6E-62 T 11-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 YH65_00590 f2a174982430393e1fdc3008abb0f0c3 331 Gene3D G3DSA:3.40.50.720 4 324 5.6E-129 T 11-10-2018 YH65_00590 f2a174982430393e1fdc3008abb0f0c3 331 PIRSF PIRSF000149 1 331 1.0E-123 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 YH65_00590 f2a174982430393e1fdc3008abb0f0c3 331 Gene3D G3DSA:3.30.360.10 148 313 5.6E-129 T 11-10-2018 YH65_00590 f2a174982430393e1fdc3008abb0f0c3 331 SUPERFAMILY SSF55347 149 312 1.85E-64 T 11-10-2018 YH65_00590 f2a174982430393e1fdc3008abb0f0c3 331 SUPERFAMILY SSF51735 3 165 1.81E-47 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily YH65_00590 f2a174982430393e1fdc3008abb0f0c3 331 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 101 7.4E-27 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 YH65_00590 f2a174982430393e1fdc3008abb0f0c3 331 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 147 154 - T 11-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 YH65_00590 f2a174982430393e1fdc3008abb0f0c3 331 SMART SM00846 3 149 3.1E-64 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 YH65_03975 ba36608153789c0234c48510d4f3cfe4 625 SMART SM00267 215 369 4.7E-5 T 11-10-2018 IPR000160 GGDEF domain YH65_03975 ba36608153789c0234c48510d4f3cfe4 625 Gene3D G3DSA:3.20.20.450 380 623 7.3E-63 T 11-10-2018 IPR035919 EAL domain superfamily YH65_03975 ba36608153789c0234c48510d4f3cfe4 625 SMART SM00052 381 621 1.1E-37 T 11-10-2018 IPR001633 EAL domain YH65_03975 ba36608153789c0234c48510d4f3cfe4 625 Pfam PF00563 EAL domain 387 616 2.3E-55 T 11-10-2018 IPR001633 EAL domain YH65_03975 ba36608153789c0234c48510d4f3cfe4 625 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 226 349 2.6E-11 T 11-10-2018 IPR000160 GGDEF domain YH65_03975 ba36608153789c0234c48510d4f3cfe4 625 SUPERFAMILY SSF141868 387 619 9.15E-62 T 11-10-2018 IPR035919 EAL domain superfamily YH65_03975 ba36608153789c0234c48510d4f3cfe4 625 Pfam PF00990 Diguanylate cyclase, GGDEF domain 226 332 1.3E-10 T 11-10-2018 IPR000160 GGDEF domain YH65_03975 ba36608153789c0234c48510d4f3cfe4 625 Pfam PF13682 Chemoreceptor zinc-binding domain 126 183 2.3E-7 T 11-10-2018 IPR025991 Chemoreceptor zinc-binding domain YH65_03975 ba36608153789c0234c48510d4f3cfe4 625 SUPERFAMILY SSF55073 230 364 1.33E-13 T 11-10-2018 IPR029787 Nucleotide cyclase YH65_03975 ba36608153789c0234c48510d4f3cfe4 625 Gene3D G3DSA:3.30.70.270 222 372 6.6E-17 T 11-10-2018 YH65_06485 8ab98a8e5212864008aecb8f3e46422a 595 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 551 568 - T 11-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 YH65_06485 8ab98a8e5212864008aecb8f3e46422a 595 SUPERFAMILY SSF89000 308 461 9.81E-38 T 11-10-2018 YH65_06485 8ab98a8e5212864008aecb8f3e46422a 595 Gene3D G3DSA:3.20.20.70 1 462 1.2E-90 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YH65_06485 8ab98a8e5212864008aecb8f3e46422a 595 Pfam PF02436 Conserved carboxylase domain 307 493 3.4E-39 T 11-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 YH65_06485 8ab98a8e5212864008aecb8f3e46422a 595 Gene3D G3DSA:2.40.50.100 528 595 8.5E-23 T 11-10-2018 YH65_06485 8ab98a8e5212864008aecb8f3e46422a 595 SUPERFAMILY SSF51230 524 595 4.71E-20 T 11-10-2018 IPR011053 Single hybrid motif YH65_06485 8ab98a8e5212864008aecb8f3e46422a 595 Pfam PF00364 Biotin-requiring enzyme 535 594 1.2E-17 T 11-10-2018 IPR000089 Biotin/lipoyl attachment YH65_06485 8ab98a8e5212864008aecb8f3e46422a 595 SUPERFAMILY SSF51569 3 294 9.52E-56 T 11-10-2018 YH65_06485 8ab98a8e5212864008aecb8f3e46422a 595 Pfam PF00682 HMGL-like 7 266 2.1E-14 T 11-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 YH65_07885 b57f4959e695ba30a3bcdace6d32efd3 225 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 77 91 - T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 YH65_07885 b57f4959e695ba30a3bcdace6d32efd3 225 PIRSF PIRSF004848 2 225 2.2E-66 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 YH65_07885 b57f4959e695ba30a3bcdace6d32efd3 225 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 7 225 5.8E-65 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 YH65_07885 b57f4959e695ba30a3bcdace6d32efd3 225 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 8 225 23.958 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 YH65_07885 b57f4959e695ba30a3bcdace6d32efd3 225 Gene3D G3DSA:3.20.20.10 1 225 1.4E-67 T 11-10-2018 IPR029066 PLP-binding barrel YH65_07885 b57f4959e695ba30a3bcdace6d32efd3 225 SUPERFAMILY SSF51419 4 224 2.32E-61 T 11-10-2018 IPR029066 PLP-binding barrel YH65_07885 b57f4959e695ba30a3bcdace6d32efd3 225 Pfam PF01168 Alanine racemase, N-terminal domain 10 224 3.6E-20 T 11-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 YH65_04995 445964568fa3e9d9243e3865800f0eba 542 Pfam PF00999 Sodium/hydrogen exchanger family 7 374 1.1E-61 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 YH65_04995 445964568fa3e9d9243e3865800f0eba 542 SUPERFAMILY SSF51735 400 534 5.25E-21 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily YH65_04995 445964568fa3e9d9243e3865800f0eba 542 Gene3D G3DSA:3.40.50.720 398 538 4.2E-23 T 11-10-2018 YH65_04995 445964568fa3e9d9243e3865800f0eba 542 Gene3D G3DSA:1.20.1530.20 2 381 1.4E-82 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily YH65_04995 445964568fa3e9d9243e3865800f0eba 542 Pfam PF02254 TrkA-N domain 404 519 3.3E-17 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 YH65_01765 3c897b6eae605859e436699099cae6af 520 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 406 511 1.3E-16 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YH65_01765 3c897b6eae605859e436699099cae6af 520 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 144 260 2.0E-20 T 11-10-2018 IPR000014 PAS domain YH65_01765 3c897b6eae605859e436699099cae6af 520 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 37 137 1.1E-5 T 11-10-2018 IPR000014 PAS domain YH65_01765 3c897b6eae605859e436699099cae6af 520 Gene3D G3DSA:1.10.287.130 280 362 3.5E-13 T 11-10-2018 YH65_01765 3c897b6eae605859e436699099cae6af 520 SMART SM00086 91 133 0.01 T 11-10-2018 IPR001610 PAC motif YH65_01765 3c897b6eae605859e436699099cae6af 520 SMART SM00086 212 254 6.7E-6 T 11-10-2018 IPR001610 PAC motif YH65_01765 3c897b6eae605859e436699099cae6af 520 SUPERFAMILY SSF55874 364 512 5.11E-30 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YH65_01765 3c897b6eae605859e436699099cae6af 520 SMART SM00091 141 207 3.0E-11 T 11-10-2018 IPR000014 PAS domain YH65_01765 3c897b6eae605859e436699099cae6af 520 SMART SM00091 16 84 9.4E-5 T 11-10-2018 IPR000014 PAS domain YH65_01765 3c897b6eae605859e436699099cae6af 520 SMART SM00387 404 516 1.2E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YH65_01765 3c897b6eae605859e436699099cae6af 520 Gene3D G3DSA:3.30.450.20 140 277 1.3E-28 T 11-10-2018 YH65_01765 3c897b6eae605859e436699099cae6af 520 SUPERFAMILY SSF55785 146 257 2.9E-23 T 11-10-2018 IPR035965 PAS domain superfamily YH65_01765 3c897b6eae605859e436699099cae6af 520 SMART SM00388 294 364 0.0028 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YH65_01765 3c897b6eae605859e436699099cae6af 520 Gene3D G3DSA:3.30.565.10 363 514 6.0E-31 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YH65_01765 3c897b6eae605859e436699099cae6af 520 Gene3D G3DSA:3.30.450.20 12 82 2.0E-16 T 11-10-2018 YH65_01765 3c897b6eae605859e436699099cae6af 520 PRINTS PR00344 Bacterial sensor protein C-terminal signature 463 473 6.4E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YH65_01765 3c897b6eae605859e436699099cae6af 520 PRINTS PR00344 Bacterial sensor protein C-terminal signature 476 494 6.4E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YH65_01765 3c897b6eae605859e436699099cae6af 520 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 459 6.4E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YH65_01765 3c897b6eae605859e436699099cae6af 520 SUPERFAMILY SSF47384 290 362 5.3E-9 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 YH65_01765 3c897b6eae605859e436699099cae6af 520 Pfam PF08447 PAS fold 39 127 2.3E-19 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 YH65_01765 3c897b6eae605859e436699099cae6af 520 Gene3D G3DSA:2.10.70.100 93 134 2.4E-6 T 11-10-2018 YH65_01765 3c897b6eae605859e436699099cae6af 520 SUPERFAMILY SSF55785 26 135 3.7E-18 T 11-10-2018 IPR035965 PAS domain superfamily YH65_01765 3c897b6eae605859e436699099cae6af 520 Pfam PF08448 PAS fold 148 255 9.1E-15 T 11-10-2018 IPR013656 PAS fold-4 YH65_10750 d23599c3abb6353e409d4177b6d52ebe 104 SUPERFAMILY SSF89957 1 101 2.88E-26 T 11-10-2018 IPR029756 MTH1187/YkoF-like YH65_10750 d23599c3abb6353e409d4177b6d52ebe 104 TIGRFAM TIGR00106 TIGR00106: uncharacterized protein, MTH1187 family 4 98 1.7E-18 T 11-10-2018 IPR002767 Thiamine-binding protein YH65_10750 d23599c3abb6353e409d4177b6d52ebe 104 Pfam PF01910 Thiamine-binding protein 5 95 6.3E-25 T 11-10-2018 IPR002767 Thiamine-binding protein YH65_10750 d23599c3abb6353e409d4177b6d52ebe 104 Gene3D G3DSA:3.30.70.930 1 96 3.9E-27 T 11-10-2018 IPR029756 MTH1187/YkoF-like YH65_08450 c187cf8c2356e2b84df89c4db94e24cb 189 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 4.7E-14 T 11-10-2018 YH65_08450 c187cf8c2356e2b84df89c4db94e24cb 189 PRINTS PR00096 Glutamine amidotransferase superfamily signature 166 179 4.7E-14 T 11-10-2018 YH65_08450 c187cf8c2356e2b84df89c4db94e24cb 189 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 4.7E-14 T 11-10-2018 YH65_08450 c187cf8c2356e2b84df89c4db94e24cb 189 Gene3D G3DSA:3.40.50.880 1 188 3.8E-66 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like YH65_08450 c187cf8c2356e2b84df89c4db94e24cb 189 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 9.7E-8 T 11-10-2018 YH65_08450 c187cf8c2356e2b84df89c4db94e24cb 189 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 9.7E-8 T 11-10-2018 YH65_08450 c187cf8c2356e2b84df89c4db94e24cb 189 PRINTS PR00097 Anthranilate synthase component II signature 74 85 1.4E-34 T 11-10-2018 YH65_08450 c187cf8c2356e2b84df89c4db94e24cb 189 PRINTS PR00097 Anthranilate synthase component II signature 120 132 1.4E-34 T 11-10-2018 YH65_08450 c187cf8c2356e2b84df89c4db94e24cb 189 PRINTS PR00097 Anthranilate synthase component II signature 47 56 1.4E-34 T 11-10-2018 YH65_08450 c187cf8c2356e2b84df89c4db94e24cb 189 PRINTS PR00097 Anthranilate synthase component II signature 2 16 1.4E-34 T 11-10-2018 YH65_08450 c187cf8c2356e2b84df89c4db94e24cb 189 PRINTS PR00097 Anthranilate synthase component II signature 99 107 1.4E-34 T 11-10-2018 YH65_08450 c187cf8c2356e2b84df89c4db94e24cb 189 PRINTS PR00097 Anthranilate synthase component II signature 166 179 1.4E-34 T 11-10-2018 YH65_08450 c187cf8c2356e2b84df89c4db94e24cb 189 SUPERFAMILY SSF52317 1 188 6.42E-57 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like YH65_08450 c187cf8c2356e2b84df89c4db94e24cb 189 Pfam PF00117 Glutamine amidotransferase class-I 4 187 9.1E-54 T 11-10-2018 IPR017926 Glutamine amidotransferase YH65_08450 c187cf8c2356e2b84df89c4db94e24cb 189 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 188 2.2E-74 T 11-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 YH65_00560 528c73afafe5e3fb309e6573453c27d1 204 Gene3D G3DSA:3.30.63.10 36 95 3.7E-63 T 11-10-2018 YH65_00560 528c73afafe5e3fb309e6573453c27d1 204 ProSitePatterns PS00856 Guanylate kinase-like signature. 39 56 - T 11-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 YH65_00560 528c73afafe5e3fb309e6573453c27d1 204 Gene3D G3DSA:3.40.50.300 9 180 3.7E-63 T 11-10-2018 YH65_00560 528c73afafe5e3fb309e6573453c27d1 204 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 6 182 4.6E-68 T 11-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 YH65_00560 528c73afafe5e3fb309e6573453c27d1 204 Pfam PF00625 Guanylate kinase 7 178 5.8E-49 T 11-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit YH65_00560 528c73afafe5e3fb309e6573453c27d1 204 Hamap MF_00328 Guanylate kinase [gmk]. 3 187 34.98 T 11-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 YH65_00560 528c73afafe5e3fb309e6573453c27d1 204 SUPERFAMILY SSF52540 4 183 1.09E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_00560 528c73afafe5e3fb309e6573453c27d1 204 SMART SM00072 4 187 8.9E-62 T 11-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit YH65_07115 64225d74d79d615555581bceb418bdf9 411 Gene3D G3DSA:3.40.50.720 332 398 8.7E-19 T 11-10-2018 YH65_07115 64225d74d79d615555581bceb418bdf9 411 Gene3D G3DSA:3.40.50.720 262 285 8.5E-8 T 11-10-2018 YH65_07115 64225d74d79d615555581bceb418bdf9 411 Pfam PF01370 NAD dependent epimerase/dehydratase family 11 284 2.2E-80 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 YH65_07115 64225d74d79d615555581bceb418bdf9 411 Gene3D G3DSA:3.40.50.720 11 172 3.6E-64 T 11-10-2018 YH65_07115 64225d74d79d615555581bceb418bdf9 411 SUPERFAMILY SSF51735 5 410 2.5E-50 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily YH65_07115 64225d74d79d615555581bceb418bdf9 411 Gene3D G3DSA:3.90.25.10 247 261 8.5E-8 T 11-10-2018 YH65_07115 64225d74d79d615555581bceb418bdf9 411 Hamap MF_00956 GDP-L-fucose synthase [fcl]. 8 409 47.656 T 11-10-2018 IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase GO:0009226|GO:0016491 KEGG: 00051+1.1.1.271|KEGG: 00520+1.1.1.271|MetaCyc: PWY-66|Reactome: R-HSA-6787639 YH65_07115 64225d74d79d615555581bceb418bdf9 411 Gene3D G3DSA:3.90.25.10 173 202 3.6E-64 T 11-10-2018 YH65_07115 64225d74d79d615555581bceb418bdf9 411 Gene3D G3DSA:3.90.25.10 348 407 8.7E-19 T 11-10-2018 YH65_03670 2551f6db229c3db9cd3cab840d9d91c6 201 Pfam PF00753 Metallo-beta-lactamase superfamily 9 177 1.7E-26 T 11-10-2018 IPR001279 Metallo-beta-lactamase YH65_03670 2551f6db229c3db9cd3cab840d9d91c6 201 SUPERFAMILY SSF56281 7 187 1.97E-43 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like YH65_03670 2551f6db229c3db9cd3cab840d9d91c6 201 SMART SM00849 12 177 2.6E-38 T 11-10-2018 IPR001279 Metallo-beta-lactamase YH65_03670 2551f6db229c3db9cd3cab840d9d91c6 201 Gene3D G3DSA:3.60.15.10 1 198 2.7E-47 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like YH65_07215 5c0e7cbc88c595d6f47bc644aa6d1d98 379 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 228 334 6.2E-10 T 11-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 YH65_07215 5c0e7cbc88c595d6f47bc644aa6d1d98 379 SUPERFAMILY SSF51419 19 250 1.89E-43 T 11-10-2018 IPR029066 PLP-binding barrel YH65_07215 5c0e7cbc88c595d6f47bc644aa6d1d98 379 Gene3D G3DSA:2.40.37.10 9 374 4.1E-160 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 YH65_07215 5c0e7cbc88c595d6f47bc644aa6d1d98 379 SUPERFAMILY SSF50621 216 368 1.59E-32 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 YH65_07215 5c0e7cbc88c595d6f47bc644aa6d1d98 379 PIRSF PIRSF038941 1 379 9.1E-187 T 11-10-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 YH65_07215 5c0e7cbc88c595d6f47bc644aa6d1d98 379 TIGRFAM TIGR01047 nspC: carboxynorspermidine decarboxylase 9 378 2.3E-170 T 11-10-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 YH65_07215 5c0e7cbc88c595d6f47bc644aa6d1d98 379 Gene3D G3DSA:3.20.20.10 18 247 4.1E-160 T 11-10-2018 IPR029066 PLP-binding barrel YH65_03630 a6360a2e40178cb285eb1938d8e5ee4e 113 SUPERFAMILY SSF54913 1 113 2.16E-42 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta YH65_03630 a6360a2e40178cb285eb1938d8e5ee4e 113 Pfam PF00543 Nitrogen regulatory protein P-II 4 106 8.7E-42 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YH65_03630 a6360a2e40178cb285eb1938d8e5ee4e 113 ProSitePatterns PS00638 P-II protein C-terminal region signature. 84 97 - T 11-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 YH65_03630 a6360a2e40178cb285eb1938d8e5ee4e 113 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 11-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 YH65_03630 a6360a2e40178cb285eb1938d8e5ee4e 113 PRINTS PR00340 P-II protein signature 84 104 3.6E-37 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YH65_03630 a6360a2e40178cb285eb1938d8e5ee4e 113 PRINTS PR00340 P-II protein signature 23 41 3.6E-37 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YH65_03630 a6360a2e40178cb285eb1938d8e5ee4e 113 PRINTS PR00340 P-II protein signature 2 17 3.6E-37 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YH65_03630 a6360a2e40178cb285eb1938d8e5ee4e 113 PRINTS PR00340 P-II protein signature 52 75 3.6E-37 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YH65_03630 a6360a2e40178cb285eb1938d8e5ee4e 113 SMART SM00938 4 106 1.8E-63 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YH65_03630 a6360a2e40178cb285eb1938d8e5ee4e 113 PIRSF PIRSF039144 1 113 1.3E-53 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YH65_03630 a6360a2e40178cb285eb1938d8e5ee4e 113 Gene3D G3DSA:3.30.70.120 1 113 6.1E-46 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal YH65_01780 900f1caca538536f3de2330703d26743 626 SUPERFAMILY SSF55874 191 354 6.68E-36 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YH65_01780 900f1caca538536f3de2330703d26743 626 Pfam PF00512 His Kinase A (phospho-acceptor) domain 136 200 5.3E-9 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YH65_01780 900f1caca538536f3de2330703d26743 626 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 246 357 7.6E-24 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YH65_01780 900f1caca538536f3de2330703d26743 626 SMART SM00448 502 616 3.9E-18 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YH65_01780 900f1caca538536f3de2330703d26743 626 SMART SM00388 134 200 3.0E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YH65_01780 900f1caca538536f3de2330703d26743 626 PRINTS PR00344 Bacterial sensor protein C-terminal signature 287 301 1.7E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YH65_01780 900f1caca538536f3de2330703d26743 626 PRINTS PR00344 Bacterial sensor protein C-terminal signature 318 336 1.7E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YH65_01780 900f1caca538536f3de2330703d26743 626 PRINTS PR00344 Bacterial sensor protein C-terminal signature 305 315 1.7E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YH65_01780 900f1caca538536f3de2330703d26743 626 PRINTS PR00344 Bacterial sensor protein C-terminal signature 342 355 1.7E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YH65_01780 900f1caca538536f3de2330703d26743 626 SUPERFAMILY SSF52172 501 621 7.4E-26 T 11-10-2018 IPR011006 CheY-like superfamily YH65_01780 900f1caca538536f3de2330703d26743 626 SUPERFAMILY SSF47384 119 202 3.14E-14 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 YH65_01780 900f1caca538536f3de2330703d26743 626 Gene3D G3DSA:3.30.565.10 201 362 1.2E-40 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YH65_01780 900f1caca538536f3de2330703d26743 626 Gene3D G3DSA:1.10.287.130 120 200 4.9E-14 T 11-10-2018 YH65_01780 900f1caca538536f3de2330703d26743 626 Gene3D G3DSA:3.40.50.2300 495 625 1.9E-27 T 11-10-2018 YH65_01780 900f1caca538536f3de2330703d26743 626 SMART SM00387 246 358 5.9E-32 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YH65_01780 900f1caca538536f3de2330703d26743 626 Pfam PF00072 Response regulator receiver domain 504 616 3.8E-20 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YH65_10745 df7cc3eca4d55a9b844f7fabe162034a 407 Pfam PF03486 HI0933-like protein 5 403 8.8E-114 T 11-10-2018 YH65_10745 df7cc3eca4d55a9b844f7fabe162034a 407 SUPERFAMILY SSF51905 2 405 1.89E-45 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_10745 df7cc3eca4d55a9b844f7fabe162034a 407 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 6 402 1.2E-129 T 11-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like YH65_10745 df7cc3eca4d55a9b844f7fabe162034a 407 Gene3D G3DSA:2.40.30.10 189 350 1.0E-120 T 11-10-2018 YH65_10745 df7cc3eca4d55a9b844f7fabe162034a 407 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 6.3E-6 T 11-10-2018 YH65_10745 df7cc3eca4d55a9b844f7fabe162034a 407 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 358 380 6.3E-6 T 11-10-2018 YH65_10745 df7cc3eca4d55a9b844f7fabe162034a 407 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 2.7E-5 T 11-10-2018 YH65_10745 df7cc3eca4d55a9b844f7fabe162034a 407 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 373 380 2.7E-5 T 11-10-2018 YH65_10745 df7cc3eca4d55a9b844f7fabe162034a 407 SUPERFAMILY SSF160996 190 351 5.36E-34 T 11-10-2018 YH65_10745 df7cc3eca4d55a9b844f7fabe162034a 407 Gene3D G3DSA:3.50.50.60 7 398 1.0E-120 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_10745 df7cc3eca4d55a9b844f7fabe162034a 407 Gene3D G3DSA:1.10.8.260 270 333 1.0E-120 T 11-10-2018 IPR023166 HI0933-like insert domain superfamily YH65_07915 ecc80d24c0f366754abbb4cc076ce52d 323 SUPERFAMILY SSF54782 218 309 2.48E-18 T 11-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 YH65_07915 ecc80d24c0f366754abbb4cc076ce52d 323 PRINTS PR00151 Porphobilinogen deaminase signature 228 245 3.3E-43 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 YH65_07915 ecc80d24c0f366754abbb4cc076ce52d 323 PRINTS PR00151 Porphobilinogen deaminase signature 141 158 3.3E-43 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 YH65_07915 ecc80d24c0f366754abbb4cc076ce52d 323 PRINTS PR00151 Porphobilinogen deaminase signature 74 93 3.3E-43 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 YH65_07915 ecc80d24c0f366754abbb4cc076ce52d 323 PRINTS PR00151 Porphobilinogen deaminase signature 122 139 3.3E-43 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 YH65_07915 ecc80d24c0f366754abbb4cc076ce52d 323 PRINTS PR00151 Porphobilinogen deaminase signature 43 63 3.3E-43 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 YH65_07915 ecc80d24c0f366754abbb4cc076ce52d 323 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 4 301 2.3E-97 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 YH65_07915 ecc80d24c0f366754abbb4cc076ce52d 323 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 224 299 6.5E-12 T 11-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 YH65_07915 ecc80d24c0f366754abbb4cc076ce52d 323 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 229 245 - T 11-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 YH65_07915 ecc80d24c0f366754abbb4cc076ce52d 323 Gene3D G3DSA:3.30.160.40 219 310 4.7E-18 T 11-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 YH65_07915 ecc80d24c0f366754abbb4cc076ce52d 323 PIRSF PIRSF001438 1 316 9.8E-104 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 YH65_07915 ecc80d24c0f366754abbb4cc076ce52d 323 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 4 211 1.1E-68 T 11-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 YH65_07915 ecc80d24c0f366754abbb4cc076ce52d 323 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 3 301 34.82 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 YH65_07915 ecc80d24c0f366754abbb4cc076ce52d 323 Gene3D G3DSA:3.40.190.10 101 200 4.5E-74 T 11-10-2018 YH65_07915 ecc80d24c0f366754abbb4cc076ce52d 323 SUPERFAMILY SSF53850 3 213 7.14E-74 T 11-10-2018 YH65_07915 ecc80d24c0f366754abbb4cc076ce52d 323 Gene3D G3DSA:3.40.190.10 5 208 4.5E-74 T 11-10-2018 YH65_07985 4d78611233f4f03ec1b0b38de1ac73b0 458 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 5 373 2.6E-125 T 11-10-2018 IPR020823 Cell division protein FtsA YH65_07985 4d78611233f4f03ec1b0b38de1ac73b0 458 PIRSF PIRSF003101 1 439 1.2E-108 T 11-10-2018 IPR020823 Cell division protein FtsA YH65_07985 4d78611233f4f03ec1b0b38de1ac73b0 458 Gene3D G3DSA:3.90.640.10 231 294 2.5E-99 T 11-10-2018 YH65_07985 4d78611233f4f03ec1b0b38de1ac73b0 458 Pfam PF02491 SHS2 domain inserted in FTSA 82 157 2.0E-22 T 11-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 YH65_07985 4d78611233f4f03ec1b0b38de1ac73b0 458 SMART SM00842 5 192 2.3E-77 T 11-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 YH65_07985 4d78611233f4f03ec1b0b38de1ac73b0 458 Pfam PF14450 Cell division protein FtsA 203 369 6.3E-20 T 11-10-2018 YH65_07985 4d78611233f4f03ec1b0b38de1ac73b0 458 Gene3D G3DSA:3.30.420.40 193 347 2.5E-99 T 11-10-2018 YH65_07985 4d78611233f4f03ec1b0b38de1ac73b0 458 Hamap MF_02033 Cell division protein FtsA [ftsA]. 1 458 27.333 T 11-10-2018 IPR020823 Cell division protein FtsA YH65_07985 4d78611233f4f03ec1b0b38de1ac73b0 458 Gene3D G3DSA:3.30.420.40 8 367 2.5E-99 T 11-10-2018 YH65_07985 4d78611233f4f03ec1b0b38de1ac73b0 458 Gene3D G3DSA:3.30.1490.110 80 165 2.5E-99 T 11-10-2018 YH65_07985 4d78611233f4f03ec1b0b38de1ac73b0 458 SUPERFAMILY SSF53067 195 373 2.2E-34 T 11-10-2018 YH65_07985 4d78611233f4f03ec1b0b38de1ac73b0 458 SUPERFAMILY SSF53067 3 209 2.27E-49 T 11-10-2018 YH65_07985 4d78611233f4f03ec1b0b38de1ac73b0 458 Pfam PF14450 Cell division protein FtsA 7 191 2.6E-11 T 11-10-2018 YH65_09935 a753074f8afd2f4cbe6b40ba3d29b2e1 228 SUPERFAMILY SSF75217 61 223 6.34E-37 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases YH65_09935 a753074f8afd2f4cbe6b40ba3d29b2e1 228 SUPERFAMILY SSF55315 1 69 5.65E-8 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like YH65_09935 a753074f8afd2f4cbe6b40ba3d29b2e1 228 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 2 72 8.1E-10 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 YH65_09935 a753074f8afd2f4cbe6b40ba3d29b2e1 228 Pfam PF00588 SpoU rRNA Methylase family 83 220 1.6E-31 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 YH65_09935 a753074f8afd2f4cbe6b40ba3d29b2e1 228 Gene3D G3DSA:3.40.1280.10 67 225 9.1E-40 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YH65_09935 a753074f8afd2f4cbe6b40ba3d29b2e1 228 SMART SM00967 2 73 2.2E-10 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 YH65_09935 a753074f8afd2f4cbe6b40ba3d29b2e1 228 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 2 222 2.0E-49 T 11-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 YH65_00030 0b3b98c37eccd2a86d2fd442b1d295c8 324 Gene3D G3DSA:3.90.1010.10 12 161 2.4E-43 T 11-10-2018 YH65_00030 0b3b98c37eccd2a86d2fd442b1d295c8 324 Pfam PF01106 NifU-like domain 252 321 1.6E-18 T 11-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 YH65_00030 0b3b98c37eccd2a86d2fd442b1d295c8 324 SUPERFAMILY SSF117916 238 323 3.49E-18 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily YH65_00030 0b3b98c37eccd2a86d2fd442b1d295c8 324 Pfam PF01592 NifU-like N terminal domain 14 149 4.5E-46 T 11-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 YH65_00030 0b3b98c37eccd2a86d2fd442b1d295c8 324 SUPERFAMILY SSF82649 14 157 7.06E-36 T 11-10-2018 YH65_00030 0b3b98c37eccd2a86d2fd442b1d295c8 324 PIRSF PIRSF000375 12 324 2.2E-107 T 11-10-2018 IPR016217 Nitrogen fixation, NifU YH65_00030 0b3b98c37eccd2a86d2fd442b1d295c8 324 Gene3D G3DSA:3.30.300.130 247 322 9.0E-16 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily YH65_00030 0b3b98c37eccd2a86d2fd442b1d295c8 324 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 258 321 3.0E-21 T 11-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 YH65_00030 0b3b98c37eccd2a86d2fd442b1d295c8 324 Pfam PF04324 BFD-like [2Fe-2S] binding domain 159 200 1.7E-10 T 11-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain YH65_03180 98f106c373ae2c660b81db1a570a87c7 304 Gene3D G3DSA:3.10.25.10 205 303 4.7E-17 T 11-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YH65_03180 98f106c373ae2c660b81db1a570a87c7 304 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 3 298 29.31 T 11-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 YH65_03180 98f106c373ae2c660b81db1a570a87c7 304 Gene3D G3DSA:3.40.50.170 1 204 1.5E-67 T 11-10-2018 YH65_03180 98f106c373ae2c660b81db1a570a87c7 304 SUPERFAMILY SSF53328 4 205 3.79E-56 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YH65_03180 98f106c373ae2c660b81db1a570a87c7 304 Pfam PF02911 Formyl transferase, C-terminal domain 202 294 4.0E-18 T 11-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YH65_03180 98f106c373ae2c660b81db1a570a87c7 304 Pfam PF00551 Formyl transferase 4 159 7.0E-35 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YH65_03180 98f106c373ae2c660b81db1a570a87c7 304 SUPERFAMILY SSF50486 203 301 3.73E-18 T 11-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 YH65_03180 98f106c373ae2c660b81db1a570a87c7 304 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 4 298 3.2E-72 T 11-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 YH65_01040 daebf42f907b9604b7d9ff39d06652ca 328 Pfam PF00535 Glycosyl transferase family 2 7 120 9.2E-15 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 YH65_01040 daebf42f907b9604b7d9ff39d06652ca 328 SUPERFAMILY SSF53448 4 304 4.13E-45 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YH65_01040 daebf42f907b9604b7d9ff39d06652ca 328 Pfam PF02709 N-terminal domain of galactosyltransferase 196 237 9.4E-6 T 11-10-2018 IPR027791 Galactosyltransferase, C-terminal Reactome: R-HSA-2022854|Reactome: R-HSA-975577 YH65_01040 daebf42f907b9604b7d9ff39d06652ca 328 Gene3D G3DSA:3.90.550.10 2 258 2.6E-43 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YH65_10730 303f82546dd1b5331805eb665fdec963 561 Pfam PF05199 GMC oxidoreductase 429 549 1.1E-19 T 11-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 YH65_10730 303f82546dd1b5331805eb665fdec963 561 SUPERFAMILY SSF54373 414 487 1.41E-5 T 11-10-2018 YH65_10730 303f82546dd1b5331805eb665fdec963 561 Gene3D G3DSA:3.50.50.60 1 174 5.6E-20 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_10730 303f82546dd1b5331805eb665fdec963 561 Gene3D G3DSA:3.50.50.60 191 348 1.0E-6 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_10730 303f82546dd1b5331805eb665fdec963 561 Pfam PF00732 GMC oxidoreductase 6 302 3.3E-13 T 11-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 YH65_10730 303f82546dd1b5331805eb665fdec963 561 SUPERFAMILY SSF51905 2 558 6.16E-57 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_10730 303f82546dd1b5331805eb665fdec963 561 Gene3D G3DSA:3.50.50.60 471 561 5.0E-14 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_02735 e23e4fd5a5dbf049c97cd4685e9d0b13 183 Gene3D G3DSA:3.90.20.20 2 127 1.1E-25 T 11-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 YH65_02735 e23e4fd5a5dbf049c97cd4685e9d0b13 183 SUPERFAMILY SSF58014 31 126 1.23E-23 T 11-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 YH65_02735 e23e4fd5a5dbf049c97cd4685e9d0b13 183 SUPERFAMILY SSF51064 130 182 2.88E-16 T 11-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 YH65_02735 e23e4fd5a5dbf049c97cd4685e9d0b13 183 PRINTS PR00773 GrpE protein signature 162 181 1.1E-25 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 YH65_02735 e23e4fd5a5dbf049c97cd4685e9d0b13 183 PRINTS PR00773 GrpE protein signature 76 91 1.1E-25 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 YH65_02735 e23e4fd5a5dbf049c97cd4685e9d0b13 183 PRINTS PR00773 GrpE protein signature 135 150 1.1E-25 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 YH65_02735 e23e4fd5a5dbf049c97cd4685e9d0b13 183 PRINTS PR00773 GrpE protein signature 48 64 1.1E-25 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 YH65_02735 e23e4fd5a5dbf049c97cd4685e9d0b13 183 Pfam PF01025 GrpE 14 183 4.3E-48 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 YH65_02735 e23e4fd5a5dbf049c97cd4685e9d0b13 183 Gene3D G3DSA:2.30.22.10 128 183 1.3E-22 T 11-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 YH65_02735 e23e4fd5a5dbf049c97cd4685e9d0b13 183 Hamap MF_01151 Protein GrpE [grpE]. 3 183 20.538 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 YH65_07705 e3ba47c3664a0b80cdb0249d29013cd8 791 Gene3D G3DSA:1.10.620.20 4 78 1.1E-8 T 11-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 YH65_07705 e3ba47c3664a0b80cdb0249d29013cd8 791 SUPERFAMILY SSF47240 8 49 7.3E-6 T 11-10-2018 IPR009078 Ferritin-like superfamily YH65_07705 e3ba47c3664a0b80cdb0249d29013cd8 791 SUPERFAMILY SSF56784 476 784 9.35E-59 T 11-10-2018 IPR036412 HAD-like superfamily YH65_07705 e3ba47c3664a0b80cdb0249d29013cd8 791 Gene3D G3DSA:3.40.1110.10 489 609 1.6E-92 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 YH65_07705 e3ba47c3664a0b80cdb0249d29013cd8 791 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 184 787 1.1E-182 T 11-10-2018 YH65_07705 e3ba47c3664a0b80cdb0249d29013cd8 791 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 247 755 1.1E-92 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 YH65_07705 e3ba47c3664a0b80cdb0249d29013cd8 791 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 677 696 1.8E-26 T 11-10-2018 YH65_07705 e3ba47c3664a0b80cdb0249d29013cd8 791 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 602 613 1.8E-26 T 11-10-2018 YH65_07705 e3ba47c3664a0b80cdb0249d29013cd8 791 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 478 492 1.8E-26 T 11-10-2018 YH65_07705 e3ba47c3664a0b80cdb0249d29013cd8 791 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 326 340 1.8E-26 T 11-10-2018 YH65_07705 e3ba47c3664a0b80cdb0249d29013cd8 791 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 624 634 1.8E-26 T 11-10-2018 YH65_07705 e3ba47c3664a0b80cdb0249d29013cd8 791 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 700 712 1.8E-26 T 11-10-2018 YH65_07705 e3ba47c3664a0b80cdb0249d29013cd8 791 SMART SM00746 7 44 1.2E-10 T 11-10-2018 IPR011017 TRASH domain YH65_07705 e3ba47c3664a0b80cdb0249d29013cd8 791 SUPERFAMILY SSF81653 280 376 1.22E-25 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 YH65_07705 e3ba47c3664a0b80cdb0249d29013cd8 791 Gene3D G3DSA:3.40.50.1000 459 729 1.6E-92 T 11-10-2018 IPR023214 HAD superfamily YH65_07705 e3ba47c3664a0b80cdb0249d29013cd8 791 Gene3D G3DSA:2.70.150.20 269 381 1.7E-41 T 11-10-2018 YH65_07705 e3ba47c3664a0b80cdb0249d29013cd8 791 Pfam PF00702 haloacid dehalogenase-like hydrolase 474 690 1.0E-42 T 11-10-2018 YH65_07705 e3ba47c3664a0b80cdb0249d29013cd8 791 PRINTS PR00943 Copper-transporting ATPase signature 461 476 6.9E-13 T 11-10-2018 YH65_07705 e3ba47c3664a0b80cdb0249d29013cd8 791 PRINTS PR00943 Copper-transporting ATPase signature 654 671 6.9E-13 T 11-10-2018 YH65_07705 e3ba47c3664a0b80cdb0249d29013cd8 791 PRINTS PR00943 Copper-transporting ATPase signature 187 206 6.9E-13 T 11-10-2018 YH65_07705 e3ba47c3664a0b80cdb0249d29013cd8 791 PRINTS PR00943 Copper-transporting ATPase signature 265 283 6.9E-13 T 11-10-2018 YH65_07705 e3ba47c3664a0b80cdb0249d29013cd8 791 PRINTS PR00943 Copper-transporting ATPase signature 711 725 6.9E-13 T 11-10-2018 YH65_07705 e3ba47c3664a0b80cdb0249d29013cd8 791 PRINTS PR00943 Copper-transporting ATPase signature 245 264 6.9E-13 T 11-10-2018 YH65_07705 e3ba47c3664a0b80cdb0249d29013cd8 791 PRINTS PR00943 Copper-transporting ATPase signature 399 413 6.9E-13 T 11-10-2018 YH65_07705 e3ba47c3664a0b80cdb0249d29013cd8 791 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 480 486 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 YH65_07705 e3ba47c3664a0b80cdb0249d29013cd8 791 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 202 786 7.5E-194 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 YH65_07705 e3ba47c3664a0b80cdb0249d29013cd8 791 Pfam PF00122 E1-E2 ATPase 276 456 1.0E-55 T 11-10-2018 YH65_07705 e3ba47c3664a0b80cdb0249d29013cd8 791 Pfam PF04945 YHS domain 5 50 5.1E-18 T 11-10-2018 IPR007029 YHS domain YH65_07705 e3ba47c3664a0b80cdb0249d29013cd8 791 SUPERFAMILY SSF81665 242 750 2.62E-16 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 YH65_00190 930b4cd174af231c801cdbbb3a2edae6 116 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 4 71 2.3E-19 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 YH65_00190 930b4cd174af231c801cdbbb3a2edae6 116 Pfam PF03840 Preprotein translocase SecG subunit 5 71 6.9E-17 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 YH65_00190 930b4cd174af231c801cdbbb3a2edae6 116 PRINTS PR01651 Protein-export SecG membrane protein signature 52 74 1.0E-8 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 YH65_00190 930b4cd174af231c801cdbbb3a2edae6 116 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 1.0E-8 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 YH65_09420 8458a66741ea002a1724a426c55ef682 186 Pfam PF02545 Maf-like protein 2 178 2.8E-26 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 YH65_09420 8458a66741ea002a1724a426c55ef682 186 SUPERFAMILY SSF52972 1 181 5.82E-38 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like YH65_09420 8458a66741ea002a1724a426c55ef682 186 PIRSF PIRSF006305 1 186 3.7E-34 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 YH65_09420 8458a66741ea002a1724a426c55ef682 186 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 178 6.2E-36 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 YH65_09420 8458a66741ea002a1724a426c55ef682 186 Gene3D G3DSA:3.90.950.10 1 185 2.2E-35 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like YH65_08540 8dba9af70a6741079715fca764e78c2b 370 Gene3D G3DSA:3.30.300.130 1 88 1.4E-12 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily YH65_08540 8dba9af70a6741079715fca764e78c2b 370 ProSitePatterns PS01215 Mrp family signature. 203 219 - T 11-10-2018 IPR000808 Mrp, conserved site GO:0005524 YH65_08540 8dba9af70a6741079715fca764e78c2b 370 Gene3D G3DSA:3.40.50.300 89 338 7.9E-81 T 11-10-2018 YH65_08540 8dba9af70a6741079715fca764e78c2b 370 SUPERFAMILY SSF52540 99 347 9.61E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_08540 8dba9af70a6741079715fca764e78c2b 370 Hamap MF_02040 Iron-sulfur cluster carrier protein. 86 340 36.689 T 11-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein YH65_08540 8dba9af70a6741079715fca764e78c2b 370 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 97 339 4.0E-97 T 11-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 YH65_08540 8dba9af70a6741079715fca764e78c2b 370 Pfam PF01883 Iron-sulfur cluster assembly protein 3 66 1.2E-9 T 11-10-2018 IPR002744 MIP18 family-like YH65_08540 8dba9af70a6741079715fca764e78c2b 370 SUPERFAMILY SSF117916 1 84 4.25E-14 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily YH65_01900 7754115d843c88af4ff041de936d1040 608 ProSitePatterns PS00802 Transketolase signature 2. 408 424 - T 11-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 YH65_01900 7754115d843c88af4ff041de936d1040 608 Pfam PF02779 Transketolase, pyrimidine binding domain 305 462 5.9E-30 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain YH65_01900 7754115d843c88af4ff041de936d1040 608 SUPERFAMILY SSF52518 5 360 2.82E-74 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold YH65_01900 7754115d843c88af4ff041de936d1040 608 Gene3D G3DSA:3.40.50.970 299 469 4.3E-56 T 11-10-2018 YH65_01900 7754115d843c88af4ff041de936d1040 608 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 1 605 39.281 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 YH65_01900 7754115d843c88af4ff041de936d1040 608 SUPERFAMILY SSF52922 473 604 4.19E-23 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 YH65_01900 7754115d843c88af4ff041de936d1040 608 ProSitePatterns PS00801 Transketolase signature 1. 20 39 - T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 YH65_01900 7754115d843c88af4ff041de936d1040 608 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 3 604 3.0E-244 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 YH65_01900 7754115d843c88af4ff041de936d1040 608 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 2 266 8.0E-100 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 YH65_01900 7754115d843c88af4ff041de936d1040 608 Pfam PF02780 Transketolase, C-terminal domain 476 595 7.4E-20 T 11-10-2018 IPR033248 Transketolase, C-terminal domain YH65_01900 7754115d843c88af4ff041de936d1040 608 SMART SM00861 302 466 1.2E-51 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain YH65_01900 7754115d843c88af4ff041de936d1040 608 SUPERFAMILY SSF52518 297 462 1.59E-54 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold YH65_01900 7754115d843c88af4ff041de936d1040 608 Gene3D G3DSA:3.40.50.920 476 607 4.2E-25 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 YH65_06260 3474a4840a91a8b92990c94e1b741097 447 Pfam PF03448 MgtE intracellular N domain 22 127 6.4E-17 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain YH65_06260 3474a4840a91a8b92990c94e1b741097 447 SUPERFAMILY SSF161093 274 446 1.44E-44 T 11-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 YH65_06260 3474a4840a91a8b92990c94e1b741097 447 SUPERFAMILY SSF158791 20 124 2.88E-11 T 11-10-2018 YH65_06260 3474a4840a91a8b92990c94e1b741097 447 Gene3D G3DSA:3.10.580.10 126 259 8.9E-27 T 11-10-2018 YH65_06260 3474a4840a91a8b92990c94e1b741097 447 Gene3D G3DSA:1.10.357.20 271 446 1.3E-49 T 11-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain YH65_06260 3474a4840a91a8b92990c94e1b741097 447 Pfam PF01769 Divalent cation transporter 318 439 3.9E-27 T 11-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 YH65_06260 3474a4840a91a8b92990c94e1b741097 447 SUPERFAMILY SSF54631 129 268 9.03E-15 T 11-10-2018 YH65_06260 3474a4840a91a8b92990c94e1b741097 447 Gene3D G3DSA:1.25.60.10 8 124 2.5E-9 T 11-10-2018 IPR038076 MgtE, N-terminal domain superfamily YH65_06260 3474a4840a91a8b92990c94e1b741097 447 SMART SM00924 20 129 6.8E-10 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain YH65_07295 21b52fa2a1e7d61f38344b9b5a323635 620 Gene3D G3DSA:2.170.130.10 32 154 2.9E-32 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily YH65_07295 21b52fa2a1e7d61f38344b9b5a323635 620 Pfam PF00593 TonB dependent receptor 184 617 9.7E-36 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel YH65_07295 21b52fa2a1e7d61f38344b9b5a323635 620 SUPERFAMILY SSF56935 27 618 1.22E-99 T 11-10-2018 YH65_07295 21b52fa2a1e7d61f38344b9b5a323635 620 Pfam PF07715 TonB-dependent Receptor Plug Domain 40 147 3.4E-24 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain YH65_07295 21b52fa2a1e7d61f38344b9b5a323635 620 Gene3D G3DSA:2.40.170.20 155 619 2.6E-76 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily YH65_02835 d4beead2303e0f7f6ddd36e4e50d98bb 144 TIGRFAM TIGR00701 TIGR00701: TIGR00701 family protein 3 144 9.3E-47 T 11-10-2018 IPR005265 Uncharacterised protein family UPF0093 YH65_02835 d4beead2303e0f7f6ddd36e4e50d98bb 144 PIRSF PIRSF004638 1 144 2.4E-46 T 11-10-2018 IPR005265 Uncharacterised protein family UPF0093 YH65_02835 d4beead2303e0f7f6ddd36e4e50d98bb 144 Pfam PF03653 Uncharacterised protein family (UPF0093) 2 144 1.2E-52 T 11-10-2018 IPR005265 Uncharacterised protein family UPF0093 YH65_10595 b3c9f78a5e898b02c30879c7ffc53769 141 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 36.378 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_10595 b3c9f78a5e898b02c30879c7ffc53769 141 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 1.6E-57 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_10595 b3c9f78a5e898b02c30879c7ffc53769 141 PRINTS PR00060 Ribosomal protein L16 signature 42 53 2.2E-34 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_10595 b3c9f78a5e898b02c30879c7ffc53769 141 PRINTS PR00060 Ribosomal protein L16 signature 88 117 2.2E-34 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_10595 b3c9f78a5e898b02c30879c7ffc53769 141 PRINTS PR00060 Ribosomal protein L16 signature 24 36 2.2E-34 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_10595 b3c9f78a5e898b02c30879c7ffc53769 141 PRINTS PR00060 Ribosomal protein L16 signature 58 87 2.2E-34 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_10595 b3c9f78a5e898b02c30879c7ffc53769 141 SUPERFAMILY SSF54686 1 136 4.32E-55 T 11-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 YH65_10595 b3c9f78a5e898b02c30879c7ffc53769 141 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 1.9E-48 T 11-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 YH65_10595 b3c9f78a5e898b02c30879c7ffc53769 141 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 11-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YH65_10595 b3c9f78a5e898b02c30879c7ffc53769 141 Gene3D G3DSA:3.90.1170.10 1 141 6.0E-54 T 11-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 YH65_01755 355108112bda11e3218a503bc61b4544 325 SUPERFAMILY SSF51569 2 323 1.61E-134 T 11-10-2018 YH65_01755 355108112bda11e3218a503bc61b4544 325 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 240 252 - T 11-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 YH65_01755 355108112bda11e3218a503bc61b4544 325 Pfam PF00490 Delta-aminolevulinic acid dehydratase 3 318 1.1E-141 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 YH65_01755 355108112bda11e3218a503bc61b4544 325 SMART SM01004 1 321 5.8E-217 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 YH65_01755 355108112bda11e3218a503bc61b4544 325 PIRSF PIRSF001415 1 324 1.6E-142 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 YH65_01755 355108112bda11e3218a503bc61b4544 325 Gene3D G3DSA:3.20.20.70 1 322 3.9E-139 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YH65_01755 355108112bda11e3218a503bc61b4544 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 118 132 4.6E-57 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 YH65_01755 355108112bda11e3218a503bc61b4544 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 188 207 4.6E-57 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 YH65_01755 355108112bda11e3218a503bc61b4544 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 150 169 4.6E-57 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 YH65_01755 355108112bda11e3218a503bc61b4544 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 240 256 4.6E-57 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 YH65_01755 355108112bda11e3218a503bc61b4544 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 295 314 4.6E-57 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 YH65_01755 355108112bda11e3218a503bc61b4544 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 265 280 4.6E-57 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 YH65_04480 f63758e17bbff5be15ddf25394e40a6b 344 Gene3D G3DSA:3.30.420.40 156 319 1.1E-128 T 11-10-2018 YH65_04480 f63758e17bbff5be15ddf25394e40a6b 344 Gene3D G3DSA:3.30.420.40 13 329 1.1E-128 T 11-10-2018 YH65_04480 f63758e17bbff5be15ddf25394e40a6b 344 SUPERFAMILY SSF53067 152 335 2.56E-49 T 11-10-2018 YH65_04480 f63758e17bbff5be15ddf25394e40a6b 344 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 134 153 1.7E-62 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 YH65_04480 f63758e17bbff5be15ddf25394e40a6b 344 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 189 209 1.7E-62 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 YH65_04480 f63758e17bbff5be15ddf25394e40a6b 344 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 302 328 1.7E-62 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 YH65_04480 f63758e17bbff5be15ddf25394e40a6b 344 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 51 69 1.7E-62 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 YH65_04480 f63758e17bbff5be15ddf25394e40a6b 344 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 71 94 1.7E-62 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 YH65_04480 f63758e17bbff5be15ddf25394e40a6b 344 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 338 7.9E-155 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 YH65_04480 f63758e17bbff5be15ddf25394e40a6b 344 Pfam PF06723 MreB/Mbl protein 10 338 2.0E-145 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 YH65_04480 f63758e17bbff5be15ddf25394e40a6b 344 Gene3D G3DSA:3.90.640.10 188 261 1.1E-128 T 11-10-2018 YH65_04480 f63758e17bbff5be15ddf25394e40a6b 344 SUPERFAMILY SSF53067 9 150 4.54E-42 T 11-10-2018 YH65_03875 b07fec6484c999f5b20ba969c653d743 142 Pfam PF00085 Thioredoxin 50 140 6.0E-27 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 YH65_03875 b07fec6484c999f5b20ba969c653d743 142 SUPERFAMILY SSF52833 27 141 4.67E-34 T 11-10-2018 IPR036249 Thioredoxin-like superfamily YH65_03875 b07fec6484c999f5b20ba969c653d743 142 TIGRFAM TIGR01068 thioredoxin: thioredoxin 49 141 2.8E-31 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 YH65_03875 b07fec6484c999f5b20ba969c653d743 142 Gene3D G3DSA:2.20.28.140 2 36 4.4E-10 T 11-10-2018 YH65_03875 b07fec6484c999f5b20ba969c653d743 142 ProSitePatterns PS00194 Thioredoxin family active site. 59 77 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 YH65_03875 b07fec6484c999f5b20ba969c653d743 142 Gene3D G3DSA:3.40.30.10 40 142 4.3E-29 T 11-10-2018 YH65_03875 b07fec6484c999f5b20ba969c653d743 142 PIRSF PIRSF000077 22 33 1300.0 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 YH65_03875 b07fec6484c999f5b20ba969c653d743 142 PIRSF PIRSF000077 36 142 7.5E-30 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 YH65_03875 b07fec6484c999f5b20ba969c653d743 142 PRINTS PR00421 Thioredoxin family signature 66 75 1.0E-8 T 11-10-2018 YH65_03875 b07fec6484c999f5b20ba969c653d743 142 PRINTS PR00421 Thioredoxin family signature 58 66 1.0E-8 T 11-10-2018 YH65_03875 b07fec6484c999f5b20ba969c653d743 142 PRINTS PR00421 Thioredoxin family signature 106 117 1.0E-8 T 11-10-2018 YH65_05790 aa69bd32da8b61aa31bf2a980801c4c6 225 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 9 221 3.9E-68 T 11-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 YH65_05790 aa69bd32da8b61aa31bf2a980801c4c6 225 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 195 4.4E-39 T 11-10-2018 YH65_05790 aa69bd32da8b61aa31bf2a980801c4c6 225 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 91 189 2.4E-12 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 YH65_05790 aa69bd32da8b61aa31bf2a980801c4c6 225 SUPERFAMILY SSF56784 5 224 3.6E-65 T 11-10-2018 IPR036412 HAD-like superfamily YH65_05790 aa69bd32da8b61aa31bf2a980801c4c6 225 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 6 225 35.662 T 11-10-2018 IPR037512 Phosphoglycolate phosphatase, prokaryotic GO:0005975|GO:0008967 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 YH65_05790 aa69bd32da8b61aa31bf2a980801c4c6 225 Gene3D G3DSA:1.10.150.240 21 94 1.7E-68 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 YH65_05790 aa69bd32da8b61aa31bf2a980801c4c6 225 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 78 195 8.4E-12 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 YH65_05790 aa69bd32da8b61aa31bf2a980801c4c6 225 Gene3D G3DSA:3.40.50.1000 9 217 1.7E-68 T 11-10-2018 IPR023214 HAD superfamily YH65_09765 6d5eb89ab6106ada447fdebedb5bdc48 337 SUPERFAMILY SSF47240 14 333 7.57E-57 T 11-10-2018 IPR009078 Ferritin-like superfamily YH65_09765 6d5eb89ab6106ada447fdebedb5bdc48 337 Gene3D G3DSA:1.10.620.20 6 329 5.0E-60 T 11-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 YH65_09765 6d5eb89ab6106ada447fdebedb5bdc48 337 Pfam PF00268 Ribonucleotide reductase, small chain 29 296 1.0E-42 T 11-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 YH65_09765 6d5eb89ab6106ada447fdebedb5bdc48 337 PIRSF PIRSF000355 1 337 4.1E-95 T 11-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 YH65_05115 f0c5a2a55f9382e159c42fd6b9ac1c3a 230 SMART SM00934 2 223 1.7E-76 T 11-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 YH65_05115 f0c5a2a55f9382e159c42fd6b9ac1c3a 230 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 2 223 2.6E-44 T 11-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 YH65_05115 f0c5a2a55f9382e159c42fd6b9ac1c3a 230 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 3 223 2.9E-61 T 11-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 YH65_05115 f0c5a2a55f9382e159c42fd6b9ac1c3a 230 Gene3D G3DSA:3.20.20.70 1 227 2.6E-71 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YH65_05115 f0c5a2a55f9382e159c42fd6b9ac1c3a 230 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 1 228 32.015 T 11-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 YH65_05115 f0c5a2a55f9382e159c42fd6b9ac1c3a 230 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 56 69 - T 11-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 YH65_05115 f0c5a2a55f9382e159c42fd6b9ac1c3a 230 SUPERFAMILY SSF51366 2 227 1.47E-60 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 YH65_06505 ddb20b7387db5a8312be4fad6a77e0fb 587 Gene3D G3DSA:3.40.50.300 351 587 4.0E-82 T 11-10-2018 YH65_06505 ddb20b7387db5a8312be4fad6a77e0fb 587 Gene3D G3DSA:1.20.1560.10 2 338 9.5E-54 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 YH65_06505 ddb20b7387db5a8312be4fad6a77e0fb 587 ProSitePatterns PS00211 ABC transporters family signature. 491 505 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YH65_06505 ddb20b7387db5a8312be4fad6a77e0fb 587 Pfam PF00664 ABC transporter transmembrane region 22 307 4.5E-28 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 YH65_06505 ddb20b7387db5a8312be4fad6a77e0fb 587 Pfam PF00005 ABC transporter 371 519 3.7E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YH65_06505 ddb20b7387db5a8312be4fad6a77e0fb 587 SUPERFAMILY SSF90123 10 337 1.26E-53 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 YH65_06505 ddb20b7387db5a8312be4fad6a77e0fb 587 SMART SM00382 380 580 6.6E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain YH65_06505 ddb20b7387db5a8312be4fad6a77e0fb 587 SUPERFAMILY SSF52540 352 584 4.28E-77 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_08145 6364a2258e6add860ff1931e9f0ae896 594 SUPERFAMILY SSF53706 3 438 2.62E-67 T 11-10-2018 YH65_08145 6364a2258e6add860ff1931e9f0ae896 594 Gene3D G3DSA:2.40.40.20 476 594 3.8E-6 T 11-10-2018 YH65_08145 6364a2258e6add860ff1931e9f0ae896 594 SUPERFAMILY SSF50692 495 594 3.39E-10 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily YH65_08145 6364a2258e6add860ff1931e9f0ae896 594 Pfam PF00384 Molybdopterin oxidoreductase 130 403 9.9E-18 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_08145 6364a2258e6add860ff1931e9f0ae896 594 Gene3D G3DSA:3.40.50.740 66 423 3.7E-51 T 11-10-2018 YH65_08145 6364a2258e6add860ff1931e9f0ae896 594 Gene3D G3DSA:3.30.2070.10 379 438 3.7E-51 T 11-10-2018 YH65_08145 6364a2258e6add860ff1931e9f0ae896 594 Gene3D G3DSA:3.40.228.10 112 308 3.7E-51 T 11-10-2018 YH65_00865 9c780da932256167c7188f64ca755430 213 Pfam PF00834 Ribulose-phosphate 3 epimerase family 3 199 7.2E-79 T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 YH65_00865 9c780da932256167c7188f64ca755430 213 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 2 213 6.2E-84 T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 YH65_00865 9c780da932256167c7188f64ca755430 213 PIRSF PIRSF001461 1 213 3.8E-86 T 11-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 YH65_00865 9c780da932256167c7188f64ca755430 213 SUPERFAMILY SSF51366 1 212 8.63E-61 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 YH65_00865 9c780da932256167c7188f64ca755430 213 Gene3D G3DSA:3.20.20.70 1 213 4.8E-75 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YH65_00865 9c780da932256167c7188f64ca755430 213 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 30 44 - T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 YH65_01315 0074aba97f8d7c9fb8c269cc403595af 529 Pfam PF02910 Fumarate reductase flavoprotein C-term 427 526 4.3E-22 T 11-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 YH65_01315 0074aba97f8d7c9fb8c269cc403595af 529 PIRSF PIRSF000171 1 529 1.3E-38 T 11-10-2018 YH65_01315 0074aba97f8d7c9fb8c269cc403595af 529 Pfam PF00890 FAD binding domain 3 373 9.7E-104 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 YH65_01315 0074aba97f8d7c9fb8c269cc403595af 529 SUPERFAMILY SSF46977 419 529 3.14E-25 T 11-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 YH65_01315 0074aba97f8d7c9fb8c269cc403595af 529 SUPERFAMILY SSF56425 228 332 4.19E-34 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 YH65_01315 0074aba97f8d7c9fb8c269cc403595af 529 Gene3D G3DSA:1.20.58.100 399 514 8.9E-27 T 11-10-2018 YH65_01315 0074aba97f8d7c9fb8c269cc403595af 529 SUPERFAMILY SSF51905 2 389 5.66E-68 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_01315 0074aba97f8d7c9fb8c269cc403595af 529 Gene3D G3DSA:3.90.700.10 238 327 1.2E-136 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 YH65_01315 0074aba97f8d7c9fb8c269cc403595af 529 Gene3D G3DSA:3.50.50.60 3 384 1.2E-136 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_03255 3d8df80ed48403248fc497c8dd527b28 184 TIGRFAM TIGR04335 AmmeMemoSam_A: AmmeMemoRadiSam system protein A 4 181 4.1E-60 T 11-10-2018 IPR027623 AmmeMemoRadiSam system protein A YH65_03255 3d8df80ed48403248fc497c8dd527b28 184 Gene3D G3DSA:3.30.700.20 3 183 4.5E-51 T 11-10-2018 IPR027485 AMMECR1, N-terminal YH65_03255 3d8df80ed48403248fc497c8dd527b28 184 Gene3D G3DSA:3.30.1490.150 109 181 4.5E-51 T 11-10-2018 YH65_03255 3d8df80ed48403248fc497c8dd527b28 184 SUPERFAMILY SSF143447 2 183 4.58E-55 T 11-10-2018 IPR036071 AMMECR1 domain superfamily YH65_03255 3d8df80ed48403248fc497c8dd527b28 184 TIGRFAM TIGR00296 TIGR00296: uncharacterized protein, PH0010 family 8 177 2.1E-36 T 11-10-2018 IPR023473 AMMECR1 YH65_03255 3d8df80ed48403248fc497c8dd527b28 184 Pfam PF01871 AMMECR1 8 181 2.9E-44 T 11-10-2018 IPR002733 AMMECR1 domain YH65_05430 b7825404c4c46d298f60d87de1ebce86 197 Pfam PF01464 Transglycosylase SLT domain 46 130 1.7E-6 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 YH65_05430 b7825404c4c46d298f60d87de1ebce86 197 Gene3D G3DSA:1.10.530.10 34 185 1.0E-17 T 11-10-2018 YH65_05430 b7825404c4c46d298f60d87de1ebce86 197 SUPERFAMILY SSF53955 59 157 1.59E-6 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily YH65_09565 f23d18a6b132210fe92993e447f6dcd5 945 SMART SM00926 40 94 3.2E-14 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_09565 f23d18a6b132210fe92993e447f6dcd5 945 Pfam PF00384 Molybdopterin oxidoreductase 97 626 2.9E-64 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_09565 f23d18a6b132210fe92993e447f6dcd5 945 SUPERFAMILY SSF53706 38 637 4.45E-154 T 11-10-2018 YH65_09565 f23d18a6b132210fe92993e447f6dcd5 945 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 3 945 0.0 T 11-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 YH65_09565 f23d18a6b132210fe92993e447f6dcd5 945 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 41 93 2.0E-17 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_09565 f23d18a6b132210fe92993e447f6dcd5 945 SUPERFAMILY SSF50692 810 945 4.35E-40 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily YH65_09565 f23d18a6b132210fe92993e447f6dcd5 945 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 31 6.2E-4 T 11-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal YH65_09565 f23d18a6b132210fe92993e447f6dcd5 945 Pfam PF01568 Molydopterin dinucleotide binding domain 832 939 5.4E-23 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 YH65_09565 f23d18a6b132210fe92993e447f6dcd5 945 Gene3D G3DSA:2.40.40.20 821 945 2.3E-45 T 11-10-2018 YH65_09565 f23d18a6b132210fe92993e447f6dcd5 945 Hamap MF_01630 Periplasmic nitrate reductase [napA]. 1 945 31.099 T 11-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 YH65_06635 9da99e288bfbd0f643f9293a52e89778 231 Gene3D G3DSA:3.40.630.70 71 230 4.0E-23 T 11-10-2018 YH65_06635 9da99e288bfbd0f643f9293a52e89778 231 SUPERFAMILY SSF55729 22 229 2.83E-28 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase YH65_06635 9da99e288bfbd0f643f9293a52e89778 231 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 72 214 9.3E-17 T 11-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 YH65_00980 1a218ba394bcc89983987fd5e82caa1b 272 Gene3D G3DSA:1.10.4030.30 24 271 1.3E-78 T 11-10-2018 YH65_00980 1a218ba394bcc89983987fd5e82caa1b 272 Pfam PF13145 PPIC-type PPIASE domain 133 239 2.5E-9 T 11-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 YH65_00980 1a218ba394bcc89983987fd5e82caa1b 272 Gene3D G3DSA:3.10.50.40 151 229 1.3E-78 T 11-10-2018 YH65_00980 1a218ba394bcc89983987fd5e82caa1b 272 SUPERFAMILY SSF109998 22 170 9.42E-23 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily YH65_00980 1a218ba394bcc89983987fd5e82caa1b 272 Pfam PF09312 SurA N-terminal domain 47 116 1.6E-11 T 11-10-2018 IPR015391 SurA N-terminal YH65_01600 1cdc93344be1fb8e851ae9f8a0e8c53d 193 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 16 182 1.1E-45 T 11-10-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 YH65_01600 1cdc93344be1fb8e851ae9f8a0e8c53d 193 SUPERFAMILY SSF55811 11 185 2.71E-38 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 YH65_01600 1cdc93344be1fb8e851ae9f8a0e8c53d 193 Gene3D G3DSA:3.90.79.10 40 191 3.1E-57 T 11-10-2018 YH65_10840 92cd6a6fd92fd76d1b142adefdd2d7ac 281 SUPERFAMILY SSF55120 62 253 5.47E-32 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 YH65_10840 92cd6a6fd92fd76d1b142adefdd2d7ac 281 Gene3D G3DSA:3.10.290.10 1 60 3.4E-18 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 YH65_10840 92cd6a6fd92fd76d1b142adefdd2d7ac 281 SUPERFAMILY SSF55174 1 56 6.08E-14 T 11-10-2018 YH65_10840 92cd6a6fd92fd76d1b142adefdd2d7ac 281 Gene3D G3DSA:3.30.70.1560 123 225 2.1E-41 T 11-10-2018 YH65_10840 92cd6a6fd92fd76d1b142adefdd2d7ac 281 Pfam PF01479 S4 domain 1 47 1.8E-9 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_10840 92cd6a6fd92fd76d1b142adefdd2d7ac 281 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 99 113 - T 11-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 YH65_10840 92cd6a6fd92fd76d1b142adefdd2d7ac 281 SMART SM00363 1 60 5.1E-14 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_10840 92cd6a6fd92fd76d1b142adefdd2d7ac 281 Gene3D G3DSA:3.30.70.580 63 233 2.1E-41 T 11-10-2018 YH65_10840 92cd6a6fd92fd76d1b142adefdd2d7ac 281 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 235 3.4E-43 T 11-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 YH65_10840 92cd6a6fd92fd76d1b142adefdd2d7ac 281 Pfam PF00849 RNA pseudouridylate synthase 62 204 8.2E-16 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 YH65_09430 605eb6de0e738a93128bfd4b85e24386 857 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 2 832 1.6E-291 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 YH65_09430 605eb6de0e738a93128bfd4b85e24386 857 Gene3D G3DSA:3.30.980.10 554 689 4.2E-51 T 11-10-2018 YH65_09430 605eb6de0e738a93128bfd4b85e24386 857 SUPERFAMILY SSF55681 2 241 8.45E-100 T 11-10-2018 YH65_09430 605eb6de0e738a93128bfd4b85e24386 857 Gene3D G3DSA:3.30.930.10 1 238 4.9E-106 T 11-10-2018 YH65_09430 605eb6de0e738a93128bfd4b85e24386 857 Gene3D G3DSA:3.30.54.20 616 669 4.2E-51 T 11-10-2018 YH65_09430 605eb6de0e738a93128bfd4b85e24386 857 SUPERFAMILY SSF101353 245 455 1.7E-59 T 11-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 YH65_09430 605eb6de0e738a93128bfd4b85e24386 857 SUPERFAMILY SSF55186 549 711 1.31E-50 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 YH65_09430 605eb6de0e738a93128bfd4b85e24386 857 Gene3D G3DSA:2.40.30.130 439 545 4.9E-10 T 11-10-2018 YH65_09430 605eb6de0e738a93128bfd4b85e24386 857 Pfam PF01411 tRNA synthetases class II (A) 2 548 1.6E-208 T 11-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 YH65_09430 605eb6de0e738a93128bfd4b85e24386 857 Gene3D G3DSA:3.10.310.40 745 850 3.3E-27 T 11-10-2018 YH65_09430 605eb6de0e738a93128bfd4b85e24386 857 Pfam PF02272 DHHA1 domain 723 846 1.6E-21 T 11-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 YH65_09430 605eb6de0e738a93128bfd4b85e24386 857 PRINTS PR00980 Alanyl-tRNA synthetase signature 222 235 9.0E-31 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 YH65_09430 605eb6de0e738a93128bfd4b85e24386 857 PRINTS PR00980 Alanyl-tRNA synthetase signature 296 309 9.0E-31 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 YH65_09430 605eb6de0e738a93128bfd4b85e24386 857 PRINTS PR00980 Alanyl-tRNA synthetase signature 272 288 9.0E-31 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 YH65_09430 605eb6de0e738a93128bfd4b85e24386 857 PRINTS PR00980 Alanyl-tRNA synthetase signature 195 206 9.0E-31 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 YH65_09430 605eb6de0e738a93128bfd4b85e24386 857 PRINTS PR00980 Alanyl-tRNA synthetase signature 71 82 9.0E-31 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 YH65_09430 605eb6de0e738a93128bfd4b85e24386 857 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 645 688 1.4E-19 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 YH65_09430 605eb6de0e738a93128bfd4b85e24386 857 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 853 169.314 T 11-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 YH65_09430 605eb6de0e738a93128bfd4b85e24386 857 SMART SM00863 645 688 1.2E-22 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 YH65_09430 605eb6de0e738a93128bfd4b85e24386 857 SUPERFAMILY SSF50447 450 545 9.53E-15 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily YH65_03755 3ea311278763993bc7b9d92ec453bada 346 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 4 340 36.878 T 11-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 YH65_03755 3ea311278763993bc7b9d92ec453bada 346 SUPERFAMILY SSF55347 133 327 1.79E-73 T 11-10-2018 YH65_03755 3ea311278763993bc7b9d92ec453bada 346 Gene3D G3DSA:3.30.360.10 132 323 7.3E-128 T 11-10-2018 YH65_03755 3ea311278763993bc7b9d92ec453bada 346 Gene3D G3DSA:3.40.50.720 7 337 7.3E-128 T 11-10-2018 YH65_03755 3ea311278763993bc7b9d92ec453bada 346 SUPERFAMILY SSF51735 5 161 1.06E-46 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily YH65_03755 3ea311278763993bc7b9d92ec453bada 346 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 6 341 2.3E-132 T 11-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 YH65_03755 3ea311278763993bc7b9d92ec453bada 346 SMART SM00859 6 123 2.5E-41 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 YH65_03755 3ea311278763993bc7b9d92ec453bada 346 PIRSF PIRSF000148 4 343 4.7E-120 T 11-10-2018 YH65_03755 3ea311278763993bc7b9d92ec453bada 346 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 143 325 2.6E-55 T 11-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 YH65_03755 3ea311278763993bc7b9d92ec453bada 346 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 235 249 - T 11-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 YH65_03755 3ea311278763993bc7b9d92ec453bada 346 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 121 1.9E-29 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 YH65_05840 fb4fabbe1759bef4a9b21fd52a2a1ebf 747 Gene3D G3DSA:3.40.190.10 412 506 2.2E-61 T 11-10-2018 YH65_05840 fb4fabbe1759bef4a9b21fd52a2a1ebf 747 Pfam PF09084 NMT1/THI5 like 29 235 2.2E-45 T 11-10-2018 IPR015168 SsuA/THI5-like YH65_05840 fb4fabbe1759bef4a9b21fd52a2a1ebf 747 SUPERFAMILY SSF55073 594 745 1.26E-43 T 11-10-2018 IPR029787 Nucleotide cyclase YH65_05840 fb4fabbe1759bef4a9b21fd52a2a1ebf 747 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 330 544 3.3E-30 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YH65_05840 fb4fabbe1759bef4a9b21fd52a2a1ebf 747 SMART SM00267 578 746 1.6E-53 T 11-10-2018 IPR000160 GGDEF domain YH65_05840 fb4fabbe1759bef4a9b21fd52a2a1ebf 747 Gene3D G3DSA:3.30.70.270 575 746 2.9E-51 T 11-10-2018 YH65_05840 fb4fabbe1759bef4a9b21fd52a2a1ebf 747 Gene3D G3DSA:3.40.190.10 318 543 2.2E-61 T 11-10-2018 YH65_05840 fb4fabbe1759bef4a9b21fd52a2a1ebf 747 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 585 746 9.6E-49 T 11-10-2018 IPR000160 GGDEF domain YH65_05840 fb4fabbe1759bef4a9b21fd52a2a1ebf 747 Pfam PF00990 Diguanylate cyclase, GGDEF domain 590 742 1.5E-43 T 11-10-2018 IPR000160 GGDEF domain YH65_05840 fb4fabbe1759bef4a9b21fd52a2a1ebf 747 SUPERFAMILY SSF53850 329 546 1.61E-42 T 11-10-2018 YH65_05840 fb4fabbe1759bef4a9b21fd52a2a1ebf 747 Gene3D G3DSA:3.40.190.10 21 284 2.1E-59 T 11-10-2018 YH65_05840 fb4fabbe1759bef4a9b21fd52a2a1ebf 747 Gene3D G3DSA:3.40.190.10 99 197 2.1E-59 T 11-10-2018 YH65_05840 fb4fabbe1759bef4a9b21fd52a2a1ebf 747 SUPERFAMILY SSF53850 16 247 1.55E-25 T 11-10-2018 YH65_05840 fb4fabbe1759bef4a9b21fd52a2a1ebf 747 SMART SM00062 328 547 2.2E-23 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YH65_05105 3f9233b0a458f0893f5cf63acb5ead55 631 Pfam PF00795 Carbon-nitrogen hydrolase 6 272 6.8E-24 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 YH65_05105 3f9233b0a458f0893f5cf63acb5ead55 631 PIRSF PIRSF006630 3 627 1.7E-159 T 11-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 YH65_05105 3f9233b0a458f0893f5cf63acb5ead55 631 Gene3D G3DSA:3.60.110.10 1 305 1.3E-79 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily YH65_05105 3f9233b0a458f0893f5cf63acb5ead55 631 Gene3D G3DSA:1.10.10.1140 533 631 1.1E-43 T 11-10-2018 YH65_05105 3f9233b0a458f0893f5cf63acb5ead55 631 Hamap MF_02090 Glutamine-dependent NAD(+) synthetase [nadE]. 5 625 27.944 T 11-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 YH65_05105 3f9233b0a458f0893f5cf63acb5ead55 631 Pfam PF02540 NAD synthase 335 522 5.0E-27 T 11-10-2018 IPR022310 NAD/GMP synthase YH65_05105 3f9233b0a458f0893f5cf63acb5ead55 631 SUPERFAMILY SSF56317 4 286 1.23E-49 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily YH65_05105 3f9233b0a458f0893f5cf63acb5ead55 631 Gene3D G3DSA:3.40.50.620 308 518 6.9E-62 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YH65_05105 3f9233b0a458f0893f5cf63acb5ead55 631 SUPERFAMILY SSF52402 310 607 1.46E-67 T 11-10-2018 YH65_05105 3f9233b0a458f0893f5cf63acb5ead55 631 TIGRFAM TIGR00552 nadE: NAD+ synthetase 336 478 4.0E-23 T 11-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 YH65_03685 5c7386ebefed70e894f229714ff76419 283 PRINTS PR00474 Glutamate 5-kinase family signature 183 210 2.0E-6 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 YH65_03685 5c7386ebefed70e894f229714ff76419 283 PRINTS PR00474 Glutamate 5-kinase family signature 55 69 2.0E-6 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 YH65_03685 5c7386ebefed70e894f229714ff76419 283 PRINTS PR00474 Glutamate 5-kinase family signature 233 253 2.0E-6 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 YH65_03685 5c7386ebefed70e894f229714ff76419 283 TIGRFAM TIGR00761 argB: acetylglutamate kinase 26 258 3.8E-73 T 11-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 YH65_03685 5c7386ebefed70e894f229714ff76419 283 PIRSF PIRSF000728 8 283 7.6E-99 T 11-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 YH65_03685 5c7386ebefed70e894f229714ff76419 283 SUPERFAMILY SSF53633 3 281 5.5E-82 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily YH65_03685 5c7386ebefed70e894f229714ff76419 283 Pfam PF00696 Amino acid kinase family 25 260 7.6E-44 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 YH65_03685 5c7386ebefed70e894f229714ff76419 283 Gene3D G3DSA:3.40.1160.10 1 282 3.2E-87 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily YH65_03685 5c7386ebefed70e894f229714ff76419 283 Hamap MF_00082 Acetylglutamate kinase [argB]. 23 276 45.191 T 11-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 YH65_00655 23e84907b06cce10a4884cd061cbf1b0 426 Gene3D G3DSA:3.40.1190.10 107 271 6.3E-27 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 YH65_00655 23e84907b06cce10a4884cd061cbf1b0 426 Gene3D G3DSA:3.90.190.20 291 425 2.6E-35 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 YH65_00655 23e84907b06cce10a4884cd061cbf1b0 426 SUPERFAMILY SSF53244 289 426 7.78E-35 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 YH65_00655 23e84907b06cce10a4884cd061cbf1b0 426 SUPERFAMILY SSF53623 112 219 1.01E-27 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 YH65_00655 23e84907b06cce10a4884cd061cbf1b0 426 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 117 140 - T 11-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 YH65_00655 23e84907b06cce10a4884cd061cbf1b0 426 Pfam PF08245 Mur ligase middle domain 119 219 4.3E-16 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 YH65_05455 ad2fe884f3343add5b195e95c1faeecf 417 TIGRFAM TIGR01579 MiaB-like-C: MiaB-like tRNA modifying enzyme 8 398 2.7E-126 T 11-10-2018 IPR006467 MiaB-like tRNA modifying enzyme GO:0016740 YH65_05455 ad2fe884f3343add5b195e95c1faeecf 417 Pfam PF04055 Radical SAM superfamily 141 305 2.7E-21 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 YH65_05455 ad2fe884f3343add5b195e95c1faeecf 417 SMART SM00729 136 349 2.4E-42 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 YH65_05455 ad2fe884f3343add5b195e95c1faeecf 417 Gene3D G3DSA:3.40.50.12160 4 130 4.2E-19 T 11-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily YH65_05455 ad2fe884f3343add5b195e95c1faeecf 417 Gene3D G3DSA:3.80.30.20 134 359 5.8E-64 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe YH65_05455 ad2fe884f3343add5b195e95c1faeecf 417 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 140 160 - T 11-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 YH65_05455 ad2fe884f3343add5b195e95c1faeecf 417 Pfam PF00919 Uncharacterized protein family UPF0004 5 93 1.4E-21 T 11-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 YH65_05455 ad2fe884f3343add5b195e95c1faeecf 417 SUPERFAMILY SSF102114 118 365 1.07E-48 T 11-10-2018 YH65_05455 ad2fe884f3343add5b195e95c1faeecf 417 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 5 403 4.6E-105 T 11-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 YH65_03105 e493f7a881e7885aa335bd75589fa734 918 SUPERFAMILY SSF52374 1 655 3.07E-135 T 11-10-2018 YH65_03105 e493f7a881e7885aa335bd75589fa734 918 SUPERFAMILY SSF47323 659 917 1.09E-49 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 YH65_03105 e493f7a881e7885aa335bd75589fa734 918 Gene3D G3DSA:1.10.730.20 647 918 1.4E-67 T 11-10-2018 YH65_03105 e493f7a881e7885aa335bd75589fa734 918 SUPERFAMILY SSF50677 204 400 3.14E-43 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 YH65_03105 e493f7a881e7885aa335bd75589fa734 918 Gene3D G3DSA:3.40.50.620 24 636 8.3E-223 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YH65_03105 e493f7a881e7885aa335bd75589fa734 918 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 27 648 3.3E-214 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 YH65_03105 e493f7a881e7885aa335bd75589fa734 918 Pfam PF08264 Anticodon-binding domain of tRNA 689 841 7.8E-20 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 YH65_03105 e493f7a881e7885aa335bd75589fa734 918 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 57 68 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 YH65_03105 e493f7a881e7885aa335bd75589fa734 918 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 14 839 8.6E-274 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 YH65_03105 e493f7a881e7885aa335bd75589fa734 918 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 1 917 19.206 T 11-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 YH65_03105 e493f7a881e7885aa335bd75589fa734 918 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 532 545 4.0E-33 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 YH65_03105 e493f7a881e7885aa335bd75589fa734 918 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 50 61 4.0E-33 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 YH65_03105 e493f7a881e7885aa335bd75589fa734 918 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 398 413 4.0E-33 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 YH65_03105 e493f7a881e7885aa335bd75589fa734 918 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 568 577 4.0E-33 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 YH65_03105 e493f7a881e7885aa335bd75589fa734 918 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 233 256 4.0E-33 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 YH65_03105 e493f7a881e7885aa335bd75589fa734 918 Gene3D G3DSA:3.90.740.10 195 405 8.3E-223 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 YH65_02085 2420b7802d04f3e4fdf272d93cc41040 223 SUPERFAMILY SSF52172 1 172 2.99E-20 T 11-10-2018 IPR011006 CheY-like superfamily YH65_02085 2420b7802d04f3e4fdf272d93cc41040 223 Pfam PF00072 Response regulator receiver domain 3 111 3.0E-12 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YH65_02085 2420b7802d04f3e4fdf272d93cc41040 223 Gene3D G3DSA:3.40.50.2300 1 120 1.3E-27 T 11-10-2018 YH65_02085 2420b7802d04f3e4fdf272d93cc41040 223 SUPERFAMILY SSF46894 120 217 4.54E-23 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YH65_02085 2420b7802d04f3e4fdf272d93cc41040 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 141 216 1.2E-19 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YH65_02085 2420b7802d04f3e4fdf272d93cc41040 223 SMART SM00862 141 216 4.9E-19 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YH65_02085 2420b7802d04f3e4fdf272d93cc41040 223 SMART SM00448 1 111 1.5E-12 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YH65_02085 2420b7802d04f3e4fdf272d93cc41040 223 Gene3D G3DSA:1.10.10.10 121 222 1.1E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YH65_05740 f43ef6d1cf886ee654c5e7718cab5fac 250 Pfam PF01936 NYN domain 8 140 5.0E-31 T 11-10-2018 IPR021139 NYN domain, limkain-b1-type YH65_05740 f43ef6d1cf886ee654c5e7718cab5fac 250 Gene3D G3DSA:3.40.50.1010 1 145 2.9E-16 T 11-10-2018 YH65_05740 f43ef6d1cf886ee654c5e7718cab5fac 250 Pfam PF12872 OST-HTH/LOTUS domain 173 240 2.9E-13 T 11-10-2018 IPR025605 OST-HTH/LOTUS domain YH65_05740 f43ef6d1cf886ee654c5e7718cab5fac 250 Gene3D G3DSA:1.10.10.1880 179 246 1.4E-19 T 11-10-2018 YH65_06935 471179e695af8632b1df6468eae31ff5 265 SMART SM00382 32 229 2.0E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain YH65_06935 471179e695af8632b1df6468eae31ff5 265 Pfam PF00005 ABC transporter 24 173 9.7E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YH65_06935 471179e695af8632b1df6468eae31ff5 265 SUPERFAMILY SSF52540 6 236 1.3E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_06935 471179e695af8632b1df6468eae31ff5 265 Gene3D G3DSA:3.40.50.300 5 264 6.2E-65 T 11-10-2018 YH65_06935 471179e695af8632b1df6468eae31ff5 265 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YH65_07530 e771f3445a05bf21d1cdb28d56b91a78 405 Pfam PF03734 L,D-transpeptidase catalytic domain 172 343 1.2E-34 T 11-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 YH65_07530 e771f3445a05bf21d1cdb28d56b91a78 405 SUPERFAMILY SSF141523 169 334 3.4E-22 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like YH65_07530 e771f3445a05bf21d1cdb28d56b91a78 405 Gene3D G3DSA:2.40.440.10 128 342 4.7E-28 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like YH65_10350 29431ef70af344f8800c84e0636697d3 89 Pfam PF01649 Ribosomal protein S20 2 84 1.4E-23 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 YH65_10350 29431ef70af344f8800c84e0636697d3 89 Gene3D G3DSA:1.20.58.110 1 87 1.0E-23 T 11-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 YH65_10350 29431ef70af344f8800c84e0636697d3 89 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 88 1.0E-23 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 YH65_10350 29431ef70af344f8800c84e0636697d3 89 SUPERFAMILY SSF46992 4 86 9.68E-25 T 11-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 YH65_10350 29431ef70af344f8800c84e0636697d3 89 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 14.853 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 YH65_10350 29431ef70af344f8800c84e0636697d3 89 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 4.0E-25 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 YH65_10025 ce1d80317bf8ef902fc9d4e128233a83 623 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 365 388 - T 11-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 YH65_10025 ce1d80317bf8ef902fc9d4e128233a83 623 Gene3D G3DSA:1.10.10.1800 456 545 2.9E-9 T 11-10-2018 YH65_10025 ce1d80317bf8ef902fc9d4e128233a83 623 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 1 620 40.822 T 11-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 YH65_10025 ce1d80317bf8ef902fc9d4e128233a83 623 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 270 284 - T 11-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 YH65_10025 ce1d80317bf8ef902fc9d4e128233a83 623 Pfam PF01134 Glucose inhibited division protein A 4 396 6.4E-163 T 11-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 YH65_10025 ce1d80317bf8ef902fc9d4e128233a83 623 SUPERFAMILY SSF51905 1 256 7.86E-47 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_10025 ce1d80317bf8ef902fc9d4e128233a83 623 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 3 617 6.6E-273 T 11-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 YH65_10025 ce1d80317bf8ef902fc9d4e128233a83 623 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 6.8E-6 T 11-10-2018 YH65_10025 ce1d80317bf8ef902fc9d4e128233a83 623 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 166 191 6.8E-6 T 11-10-2018 YH65_10025 ce1d80317bf8ef902fc9d4e128233a83 623 Gene3D G3DSA:3.50.50.60 1 215 1.6E-82 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_10025 ce1d80317bf8ef902fc9d4e128233a83 623 Gene3D G3DSA:3.50.50.60 302 455 9.0E-61 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_10025 ce1d80317bf8ef902fc9d4e128233a83 623 Gene3D G3DSA:1.10.150.570 565 617 1.0E-19 T 11-10-2018 YH65_10025 ce1d80317bf8ef902fc9d4e128233a83 623 SMART SM01228 542 613 6.7E-34 T 11-10-2018 YH65_10025 ce1d80317bf8ef902fc9d4e128233a83 623 Pfam PF13932 GidA associated domain 398 611 4.9E-69 T 11-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 YH65_02040 3ac39494908f490192116b5098651594 519 Pfam PF13584 Oxygen tolerance 32 453 2.6E-63 T 11-10-2018 IPR025738 Aerotolerance-related protein BatD YH65_01235 04a77a404cfa29797189b2e1d787eec1 696 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 11 180 2.1E-37 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 YH65_01235 04a77a404cfa29797189b2e1d787eec1 696 Gene3D G3DSA:3.30.230.10 487 690 3.2E-94 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YH65_01235 04a77a404cfa29797189b2e1d787eec1 696 Gene3D G3DSA:3.30.70.240 607 677 3.2E-94 T 11-10-2018 YH65_01235 04a77a404cfa29797189b2e1d787eec1 696 SUPERFAMILY SSF54980 405 483 6.12E-25 T 11-10-2018 IPR035647 EF-G domain III/V-like YH65_01235 04a77a404cfa29797189b2e1d787eec1 696 SUPERFAMILY SSF54211 482 602 1.49E-44 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold YH65_01235 04a77a404cfa29797189b2e1d787eec1 696 Pfam PF03764 Elongation factor G, domain IV 482 601 2.6E-47 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 YH65_01235 04a77a404cfa29797189b2e1d787eec1 696 Pfam PF00009 Elongation factor Tu GTP binding domain 9 284 3.7E-66 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YH65_01235 04a77a404cfa29797189b2e1d787eec1 696 Gene3D G3DSA:3.40.50.300 1 294 1.0E-107 T 11-10-2018 YH65_01235 04a77a404cfa29797189b2e1d787eec1 696 SUPERFAMILY SSF54980 606 692 1.77E-31 T 11-10-2018 IPR035647 EF-G domain III/V-like YH65_01235 04a77a404cfa29797189b2e1d787eec1 696 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site YH65_01235 04a77a404cfa29797189b2e1d787eec1 696 PRINTS PR00315 GTP-binding elongation factor signature 12 25 5.1E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YH65_01235 04a77a404cfa29797189b2e1d787eec1 696 PRINTS PR00315 GTP-binding elongation factor signature 78 88 5.1E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YH65_01235 04a77a404cfa29797189b2e1d787eec1 696 PRINTS PR00315 GTP-binding elongation factor signature 130 139 5.1E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YH65_01235 04a77a404cfa29797189b2e1d787eec1 696 PRINTS PR00315 GTP-binding elongation factor signature 58 66 5.1E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YH65_01235 04a77a404cfa29797189b2e1d787eec1 696 PRINTS PR00315 GTP-binding elongation factor signature 94 105 5.1E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YH65_01235 04a77a404cfa29797189b2e1d787eec1 696 Pfam PF03144 Elongation factor Tu domain 2 327 394 1.6E-13 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 YH65_01235 04a77a404cfa29797189b2e1d787eec1 696 Hamap MF_00054_B Elongation factor G [fusA]. 6 694 110.987 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 YH65_01235 04a77a404cfa29797189b2e1d787eec1 696 Gene3D G3DSA:3.30.70.870 409 486 2.2E-33 T 11-10-2018 YH65_01235 04a77a404cfa29797189b2e1d787eec1 696 Pfam PF00679 Elongation factor G C-terminus 603 689 6.3E-33 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like YH65_01235 04a77a404cfa29797189b2e1d787eec1 696 Pfam PF14492 Elongation Factor G, domain II 407 480 5.3E-35 T 11-10-2018 YH65_01235 04a77a404cfa29797189b2e1d787eec1 696 SMART SM00838 603 690 5.9E-59 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like YH65_01235 04a77a404cfa29797189b2e1d787eec1 696 SMART SM00889 483 601 5.9E-71 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 YH65_01235 04a77a404cfa29797189b2e1d787eec1 696 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 695 0.0 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 YH65_01235 04a77a404cfa29797189b2e1d787eec1 696 SUPERFAMILY SSF52540 6 284 2.46E-101 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_01235 04a77a404cfa29797189b2e1d787eec1 696 Gene3D G3DSA:2.40.30.10 295 408 5.3E-43 T 11-10-2018 YH65_01235 04a77a404cfa29797189b2e1d787eec1 696 SUPERFAMILY SSF50447 267 407 4.54E-34 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily YH65_08900 cfb825c71121703e5507f4d188401964 607 SUPERFAMILY SSF52172 1 158 3.98E-34 T 11-10-2018 IPR011006 CheY-like superfamily YH65_08900 cfb825c71121703e5507f4d188401964 607 SUPERFAMILY SSF55073 436 593 2.75E-53 T 11-10-2018 IPR029787 Nucleotide cyclase YH65_08900 cfb825c71121703e5507f4d188401964 607 Pfam PF13426 PAS domain 317 418 3.7E-15 T 11-10-2018 IPR000014 PAS domain YH65_08900 cfb825c71121703e5507f4d188401964 607 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 430 590 1.5E-49 T 11-10-2018 IPR000160 GGDEF domain YH65_08900 cfb825c71121703e5507f4d188401964 607 Gene3D G3DSA:3.30.70.270 428 597 4.2E-61 T 11-10-2018 YH65_08900 cfb825c71121703e5507f4d188401964 607 Gene3D G3DSA:3.30.450.20 299 427 8.9E-33 T 11-10-2018 YH65_08900 cfb825c71121703e5507f4d188401964 607 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 306 422 9.2E-14 T 11-10-2018 IPR000014 PAS domain YH65_08900 cfb825c71121703e5507f4d188401964 607 SMART SM00267 420 592 7.8E-71 T 11-10-2018 IPR000160 GGDEF domain YH65_08900 cfb825c71121703e5507f4d188401964 607 Pfam PF00990 Diguanylate cyclase, GGDEF domain 431 588 3.5E-51 T 11-10-2018 IPR000160 GGDEF domain YH65_08900 cfb825c71121703e5507f4d188401964 607 Gene3D G3DSA:3.30.450.40 152 298 1.3E-12 T 11-10-2018 IPR029016 GAF-like domain superfamily YH65_08900 cfb825c71121703e5507f4d188401964 607 SUPERFAMILY SSF55785 316 417 4.01E-27 T 11-10-2018 IPR035965 PAS domain superfamily YH65_08900 cfb825c71121703e5507f4d188401964 607 SMART SM00091 306 372 9.2E-6 T 11-10-2018 IPR000014 PAS domain YH65_08900 cfb825c71121703e5507f4d188401964 607 Pfam PF00072 Response regulator receiver domain 6 112 9.6E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YH65_08900 cfb825c71121703e5507f4d188401964 607 SUPERFAMILY SSF55781 119 298 1.44E-11 T 11-10-2018 YH65_08900 cfb825c71121703e5507f4d188401964 607 SMART SM00448 4 115 1.3E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YH65_08900 cfb825c71121703e5507f4d188401964 607 Gene3D G3DSA:3.40.50.2300 3 151 2.1E-32 T 11-10-2018 YH65_08900 cfb825c71121703e5507f4d188401964 607 SMART SM00086 378 420 3.5E-5 T 11-10-2018 IPR001610 PAC motif YH65_08465 f7232d3a20fecd2602ff7b057ec26e4e 602 Gene3D G3DSA:3.40.50.10490 443 587 2.2E-119 T 11-10-2018 YH65_08465 f7232d3a20fecd2602ff7b057ec26e4e 602 Gene3D G3DSA:3.40.50.10490 247 601 2.2E-119 T 11-10-2018 YH65_08465 f7232d3a20fecd2602ff7b057ec26e4e 602 SUPERFAMILY SSF56235 2 230 2.06E-64 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal YH65_08465 f7232d3a20fecd2602ff7b057ec26e4e 602 Pfam PF13522 Glutamine amidotransferase domain 67 192 8.2E-20 T 11-10-2018 YH65_08465 f7232d3a20fecd2602ff7b057ec26e4e 602 Pfam PF01380 SIS domain 465 549 4.0E-12 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 YH65_08465 f7232d3a20fecd2602ff7b057ec26e4e 602 Pfam PF01380 SIS domain 292 413 9.4E-30 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 YH65_08465 f7232d3a20fecd2602ff7b057ec26e4e 602 Gene3D G3DSA:3.60.20.10 2 239 3.8E-68 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal YH65_08465 f7232d3a20fecd2602ff7b057ec26e4e 602 SUPERFAMILY SSF53697 244 602 1.3E-91 T 11-10-2018 YH65_08465 f7232d3a20fecd2602ff7b057ec26e4e 602 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 602 1.0E-228 T 11-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 YH65_08465 f7232d3a20fecd2602ff7b057ec26e4e 602 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 602 36.313 T 11-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 YH65_01230 ff960adaa509bf26bf05fff98bda2a26 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 5.3E-70 T 11-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 YH65_01230 ff960adaa509bf26bf05fff98bda2a26 156 Gene3D G3DSA:1.10.455.10 2 156 4.9E-61 T 11-10-2018 IPR036823 Ribosomal protein S7 domain superfamily YH65_01230 ff960adaa509bf26bf05fff98bda2a26 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 11-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_01230 ff960adaa509bf26bf05fff98bda2a26 156 SUPERFAMILY SSF47973 6 149 4.58E-60 T 11-10-2018 IPR036823 Ribosomal protein S7 domain superfamily YH65_01230 ff960adaa509bf26bf05fff98bda2a26 156 PIRSF PIRSF002122 5 156 2.2E-60 T 11-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 YH65_01230 ff960adaa509bf26bf05fff98bda2a26 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.29 T 11-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 YH65_01230 ff960adaa509bf26bf05fff98bda2a26 156 Pfam PF00177 Ribosomal protein S7p/S5e 3 149 3.0E-64 T 11-10-2018 IPR023798 Ribosomal protein S7 domain YH65_09585 22cf4e441ee8ee294a7607c5ed30a091 188 SUPERFAMILY SSF51735 1 113 1.74E-19 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily YH65_09585 22cf4e441ee8ee294a7607c5ed30a091 188 Pfam PF13241 Putative NAD(P)-binding 6 115 1.3E-27 T 11-10-2018 YH65_09585 22cf4e441ee8ee294a7607c5ed30a091 188 SUPERFAMILY SSF75615 108 186 2.22E-18 T 11-10-2018 YH65_09585 22cf4e441ee8ee294a7607c5ed30a091 188 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 185 2.6E-40 T 11-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 YH65_09585 22cf4e441ee8ee294a7607c5ed30a091 188 Pfam PF14824 Sirohaem biosynthesis protein central 120 145 1.3E-7 T 11-10-2018 IPR028281 Siroheme synthase, central domain KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 YH65_09585 22cf4e441ee8ee294a7607c5ed30a091 188 Gene3D G3DSA:3.30.160.110 113 148 1.1E-7 T 11-10-2018 YH65_09585 22cf4e441ee8ee294a7607c5ed30a091 188 Gene3D G3DSA:3.40.50.720 1 112 5.3E-31 T 11-10-2018 YH65_03565 4c6bdad6e5f69587cb0b35ab3b8c9543 300 Hamap MF_00367 GTPase Era [era]. 9 298 31.497 T 11-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_03565 4c6bdad6e5f69587cb0b35ab3b8c9543 300 SUPERFAMILY SSF52540 14 201 4.08E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_03565 4c6bdad6e5f69587cb0b35ab3b8c9543 300 Gene3D G3DSA:3.40.50.300 6 188 5.9E-39 T 11-10-2018 YH65_03565 4c6bdad6e5f69587cb0b35ab3b8c9543 300 TIGRFAM TIGR00436 era: GTP-binding protein Era 12 280 6.4E-69 T 11-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_03565 4c6bdad6e5f69587cb0b35ab3b8c9543 300 Pfam PF07650 KH domain 200 286 4.5E-16 T 11-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_03565 4c6bdad6e5f69587cb0b35ab3b8c9543 300 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 171 2.7E-24 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 YH65_03565 4c6bdad6e5f69587cb0b35ab3b8c9543 300 SUPERFAMILY SSF54814 185 298 1.05E-33 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 YH65_03565 4c6bdad6e5f69587cb0b35ab3b8c9543 300 Gene3D G3DSA:3.30.300.20 189 300 1.2E-34 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta YH65_03565 4c6bdad6e5f69587cb0b35ab3b8c9543 300 Pfam PF01926 50S ribosome-binding GTPase 14 127 1.8E-22 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 YH65_08780 4aba56e2c4559b8483f43bb19dd5ae50 113 Pfam PF02943 Ferredoxin thioredoxin reductase catalytic beta chain 14 112 9.7E-29 T 11-10-2018 IPR004209 Ferredoxin thioredoxin reductase catalytic beta subunit GO:0016730|GO:0055114 YH65_08780 4aba56e2c4559b8483f43bb19dd5ae50 113 SUPERFAMILY SSF57662 13 109 1.57E-23 T 11-10-2018 IPR036644 Ferredoxin thioredoxin reductase catalytic beta subunit superfamily GO:0016730|GO:0055114 YH65_08780 4aba56e2c4559b8483f43bb19dd5ae50 113 Gene3D G3DSA:3.90.460.10 9 113 1.3E-21 T 11-10-2018 IPR036644 Ferredoxin thioredoxin reductase catalytic beta subunit superfamily GO:0016730|GO:0055114 YH65_07570 867f33eafa1ba697b48ae63eef973348 465 Gene3D G3DSA:1.20.120.640 309 464 2.1E-34 T 11-10-2018 YH65_07570 867f33eafa1ba697b48ae63eef973348 465 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 1 464 9.6E-158 T 11-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 YH65_07570 867f33eafa1ba697b48ae63eef973348 465 SMART SM00840 344 408 0.008 T 11-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 YH65_07570 867f33eafa1ba697b48ae63eef973348 465 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 1 465 35.063 T 11-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 YH65_07570 867f33eafa1ba697b48ae63eef973348 465 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 14 316 7.0E-119 T 11-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 YH65_07570 867f33eafa1ba697b48ae63eef973348 465 Gene3D G3DSA:3.40.50.620 1 308 1.3E-114 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YH65_07570 867f33eafa1ba697b48ae63eef973348 465 SUPERFAMILY SSF47323 319 464 1.31E-32 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 YH65_07570 867f33eafa1ba697b48ae63eef973348 465 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 190 208 4.9E-24 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 YH65_07570 867f33eafa1ba697b48ae63eef973348 465 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 60 69 4.9E-24 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 YH65_07570 867f33eafa1ba697b48ae63eef973348 465 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 225 246 4.9E-24 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 YH65_07570 867f33eafa1ba697b48ae63eef973348 465 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 24 35 4.9E-24 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 YH65_07570 867f33eafa1ba697b48ae63eef973348 465 Pfam PF09190 DALR domain 347 399 3.9E-5 T 11-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 YH65_07570 867f33eafa1ba697b48ae63eef973348 465 SUPERFAMILY SSF52374 2 316 1.13E-83 T 11-10-2018 YH65_02955 cdb4e5700c851fb86edc00ef87eadf60 569 Gene3D G3DSA:3.40.50.970 358 568 6.2E-69 T 11-10-2018 YH65_02955 cdb4e5700c851fb86edc00ef87eadf60 569 SUPERFAMILY SSF52518 365 560 3.99E-70 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold YH65_02955 cdb4e5700c851fb86edc00ef87eadf60 569 SUPERFAMILY SSF52467 185 354 8.0E-60 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily YH65_02955 cdb4e5700c851fb86edc00ef87eadf60 569 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 193 327 2.1E-47 T 11-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 YH65_02955 cdb4e5700c851fb86edc00ef87eadf60 569 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 3 165 1.2E-58 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 YH65_02955 cdb4e5700c851fb86edc00ef87eadf60 569 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 387 535 4.4E-51 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 YH65_02955 cdb4e5700c851fb86edc00ef87eadf60 569 Gene3D G3DSA:3.40.50.970 1 175 1.2E-72 T 11-10-2018 YH65_02955 cdb4e5700c851fb86edc00ef87eadf60 569 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 3 558 1.0E-242 T 11-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 YH65_02955 cdb4e5700c851fb86edc00ef87eadf60 569 SUPERFAMILY SSF52518 1 184 1.5E-66 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold YH65_02955 cdb4e5700c851fb86edc00ef87eadf60 569 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 424 443 - T 11-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 YH65_02955 cdb4e5700c851fb86edc00ef87eadf60 569 Gene3D G3DSA:3.40.50.1220 187 353 3.4E-56 T 11-10-2018 YH65_07795 14557cafe11d1ab3efd22cd1e2d37cb0 456 Pfam PF13098 Thioredoxin-like domain 355 449 9.0E-13 T 11-10-2018 IPR012336 Thioredoxin-like fold YH65_07795 14557cafe11d1ab3efd22cd1e2d37cb0 456 SUPERFAMILY SSF52833 347 454 1.63E-19 T 11-10-2018 IPR036249 Thioredoxin-like superfamily YH65_07795 14557cafe11d1ab3efd22cd1e2d37cb0 456 Gene3D G3DSA:3.40.30.10 327 453 1.6E-24 T 11-10-2018 YH65_07795 14557cafe11d1ab3efd22cd1e2d37cb0 456 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 43 248 1.2E-22 T 11-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 YH65_01470 848582d64150971876c096bd110f3675 249 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 82 95 - T 11-10-2018 IPR020583 Inositol monophosphatase, metal-binding site YH65_01470 848582d64150971876c096bd110f3675 249 PRINTS PR00377 Inositol monophosphatase superfamily signature 82 98 2.5E-13 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 YH65_01470 848582d64150971876c096bd110f3675 249 PRINTS PR00377 Inositol monophosphatase superfamily signature 206 230 2.5E-13 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 YH65_01470 848582d64150971876c096bd110f3675 249 PRINTS PR00377 Inositol monophosphatase superfamily signature 131 154 2.5E-13 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 YH65_01470 848582d64150971876c096bd110f3675 249 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 2.5E-13 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 YH65_01470 848582d64150971876c096bd110f3675 249 Gene3D G3DSA:3.30.540.10 4 141 2.8E-42 T 11-10-2018 YH65_01470 848582d64150971876c096bd110f3675 249 SUPERFAMILY SSF56655 7 248 2.49E-72 T 11-10-2018 YH65_01470 848582d64150971876c096bd110f3675 249 Gene3D G3DSA:3.40.190.80 146 249 2.5E-34 T 11-10-2018 YH65_01470 848582d64150971876c096bd110f3675 249 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 6 249 38.129 T 11-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 YH65_01470 848582d64150971876c096bd110f3675 249 Pfam PF00459 Inositol monophosphatase family 12 238 5.5E-53 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 YH65_01470 848582d64150971876c096bd110f3675 249 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 7 248 8.8E-87 T 11-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 YH65_08075 5e59af9edf15d3512a55e3a694c7cf3e 288 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 24 282 1.5E-92 T 11-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 YH65_08075 5e59af9edf15d3512a55e3a694c7cf3e 288 SMART SM00962 83 284 1.9E-104 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 YH65_08075 5e59af9edf15d3512a55e3a694c7cf3e 288 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 257 270 - T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 YH65_08075 5e59af9edf15d3512a55e3a694c7cf3e 288 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 23 284 54.31 T 11-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 YH65_08075 5e59af9edf15d3512a55e3a694c7cf3e 288 SUPERFAMILY SSF52540 82 284 1.28E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_08075 5e59af9edf15d3512a55e3a694c7cf3e 288 Gene3D G3DSA:1.20.120.140 4 281 6.2E-94 T 11-10-2018 YH65_08075 5e59af9edf15d3512a55e3a694c7cf3e 288 SUPERFAMILY SSF47364 19 59 7.46E-5 T 11-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 YH65_08075 5e59af9edf15d3512a55e3a694c7cf3e 288 SMART SM00382 82 265 2.3E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain YH65_08075 5e59af9edf15d3512a55e3a694c7cf3e 288 Gene3D G3DSA:3.40.50.300 83 272 6.2E-94 T 11-10-2018 YH65_08075 5e59af9edf15d3512a55e3a694c7cf3e 288 Pfam PF00448 SRP54-type protein, GTPase domain 84 283 8.7E-73 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 YH65_04220 bbbf780e254307c4aaf0493471065a69 396 SUPERFAMILY SSF53300 270 371 5.72E-5 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily YH65_04220 bbbf780e254307c4aaf0493471065a69 396 Pfam PF13203 Putative metallopeptidase domain 3 264 2.0E-39 T 11-10-2018 IPR025154 Putative metallopeptidase domain YH65_04220 bbbf780e254307c4aaf0493471065a69 396 Pfam PF09967 VWA-like domain (DUF2201) 271 393 4.6E-24 T 11-10-2018 IPR018698 VWA-like domain YH65_10945 7dcc17eb68b0b5a41054b49e62c1b08c 512 SMART SM00028 341 374 120.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 YH65_10945 7dcc17eb68b0b5a41054b49e62c1b08c 512 SMART SM00028 376 409 0.22 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 YH65_10945 7dcc17eb68b0b5a41054b49e62c1b08c 512 Pfam PF13519 von Willebrand factor type A domain 62 164 4.8E-15 T 11-10-2018 IPR002035 von Willebrand factor, type A YH65_10945 7dcc17eb68b0b5a41054b49e62c1b08c 512 SUPERFAMILY SSF53300 61 245 2.41E-15 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily YH65_10945 7dcc17eb68b0b5a41054b49e62c1b08c 512 Gene3D G3DSA:1.25.40.10 286 461 6.5E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YH65_10945 7dcc17eb68b0b5a41054b49e62c1b08c 512 SMART SM00327 58 217 6.0E-8 T 11-10-2018 IPR002035 von Willebrand factor, type A YH65_10945 7dcc17eb68b0b5a41054b49e62c1b08c 512 SUPERFAMILY SSF48452 314 420 4.08E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YH65_10945 7dcc17eb68b0b5a41054b49e62c1b08c 512 Gene3D G3DSA:3.40.50.410 57 258 3.9E-30 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily YH65_03690 8fab1de72f68753f4d1567cfd98c85d4 298 Pfam PF00034 Cytochrome c 178 287 5.7E-10 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YH65_03690 8fab1de72f68753f4d1567cfd98c85d4 298 PIRSF PIRSF000294 8 296 4.5E-109 T 11-10-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 YH65_03690 8fab1de72f68753f4d1567cfd98c85d4 298 Gene3D G3DSA:1.10.760.10 23 293 6.7E-112 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_03690 8fab1de72f68753f4d1567cfd98c85d4 298 Gene3D G3DSA:1.10.760.10 25 171 6.7E-112 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_03690 8fab1de72f68753f4d1567cfd98c85d4 298 Pfam PF03150 Di-haem cytochrome c peroxidase 26 171 7.8E-52 T 11-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 YH65_03690 8fab1de72f68753f4d1567cfd98c85d4 298 SUPERFAMILY SSF46626 158 292 6.24E-37 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_03690 8fab1de72f68753f4d1567cfd98c85d4 298 SUPERFAMILY SSF46626 10 159 5.65E-48 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_03860 f7575223312215fa9279ae5370bb21e1 91 SUPERFAMILY SSF54975 1 91 3.71E-20 T 11-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 YH65_03860 f7575223312215fa9279ae5370bb21e1 91 Pfam PF00708 Acylphosphatase 4 89 3.1E-23 T 11-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 YH65_03860 f7575223312215fa9279ae5370bb21e1 91 Gene3D G3DSA:3.30.70.100 1 91 1.6E-22 T 11-10-2018 YH65_09170 e113388b29b9098a18f1915d01f86ddc 379 SUPERFAMILY SSF53383 28 369 4.92E-76 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase YH65_09170 e113388b29b9098a18f1915d01f86ddc 379 Gene3D G3DSA:3.90.1150.10 8 362 7.7E-121 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 YH65_09170 e113388b29b9098a18f1915d01f86ddc 379 Pfam PF00155 Aminotransferase class I and II 28 368 2.9E-37 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YH65_09170 e113388b29b9098a18f1915d01f86ddc 379 Gene3D G3DSA:3.40.640.10 38 278 7.7E-121 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 YH65_02635 afe4da77cab186810c4820d777cd5295 308 Gene3D G3DSA:3.30.70.1350 203 286 5.3E-20 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 YH65_02635 afe4da77cab186810c4820d777cd5295 308 Gene3D G3DSA:1.20.1510.10 4 202 1.7E-51 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily YH65_02635 afe4da77cab186810c4820d777cd5295 308 SUPERFAMILY SSF160240 205 287 2.49E-18 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 YH65_02635 afe4da77cab186810c4820d777cd5295 308 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 5 271 2.0E-62 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 YH65_02635 afe4da77cab186810c4820d777cd5295 308 Pfam PF01545 Cation efflux family 9 202 1.6E-37 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 YH65_02635 afe4da77cab186810c4820d777cd5295 308 Pfam PF16916 Dimerisation domain of Zinc Transporter 207 285 5.9E-20 T 11-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain YH65_02635 afe4da77cab186810c4820d777cd5295 308 SUPERFAMILY SSF161111 4 203 1.31E-48 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily YH65_00675 b3fdf71625cc8bf95431f48edb9e80fb 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 245 1.3E-64 T 11-10-2018 YH65_00675 b3fdf71625cc8bf95431f48edb9e80fb 247 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 246 5.2E-95 T 11-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 YH65_00675 b3fdf71625cc8bf95431f48edb9e80fb 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 5.5E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YH65_00675 b3fdf71625cc8bf95431f48edb9e80fb 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 5.5E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YH65_00675 b3fdf71625cc8bf95431f48edb9e80fb 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 5.5E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YH65_00675 b3fdf71625cc8bf95431f48edb9e80fb 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 191 6.5E-4 T 11-10-2018 YH65_00675 b3fdf71625cc8bf95431f48edb9e80fb 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 6.0E-44 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YH65_00675 b3fdf71625cc8bf95431f48edb9e80fb 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 6.0E-44 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YH65_00675 b3fdf71625cc8bf95431f48edb9e80fb 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 6.0E-44 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YH65_00675 b3fdf71625cc8bf95431f48edb9e80fb 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 6.0E-44 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YH65_00675 b3fdf71625cc8bf95431f48edb9e80fb 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 6.0E-44 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YH65_00675 b3fdf71625cc8bf95431f48edb9e80fb 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 6.0E-44 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YH65_00675 b3fdf71625cc8bf95431f48edb9e80fb 247 Gene3D G3DSA:3.40.50.720 1 247 1.1E-78 T 11-10-2018 YH65_00675 b3fdf71625cc8bf95431f48edb9e80fb 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 YH65_00675 b3fdf71625cc8bf95431f48edb9e80fb 247 SUPERFAMILY SSF51735 5 247 1.24E-80 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily YH65_08760 a837f66175d9b6ea050606ca9d90c0ba 339 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 242 337 1.0E-16 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YH65_08760 a837f66175d9b6ea050606ca9d90c0ba 339 SUPERFAMILY SSF47384 118 198 2.35E-13 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 YH65_08760 a837f66175d9b6ea050606ca9d90c0ba 339 SMART SM00387 239 339 5.7E-18 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YH65_08760 a837f66175d9b6ea050606ca9d90c0ba 339 Pfam PF00512 His Kinase A (phospho-acceptor) domain 131 196 3.7E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YH65_08760 a837f66175d9b6ea050606ca9d90c0ba 339 SMART SM00388 130 197 2.2E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YH65_08760 a837f66175d9b6ea050606ca9d90c0ba 339 Gene3D G3DSA:3.30.565.10 204 339 1.1E-26 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YH65_08760 a837f66175d9b6ea050606ca9d90c0ba 339 SUPERFAMILY SSF55874 199 337 7.2E-29 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YH65_08760 a837f66175d9b6ea050606ca9d90c0ba 339 PRINTS PR00344 Bacterial sensor protein C-terminal signature 303 321 6.6E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YH65_08760 a837f66175d9b6ea050606ca9d90c0ba 339 PRINTS PR00344 Bacterial sensor protein C-terminal signature 327 339 6.6E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YH65_08760 a837f66175d9b6ea050606ca9d90c0ba 339 PRINTS PR00344 Bacterial sensor protein C-terminal signature 270 284 6.6E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YH65_08760 a837f66175d9b6ea050606ca9d90c0ba 339 Gene3D G3DSA:1.10.287.130 94 195 5.5E-13 T 11-10-2018 YH65_01965 c3deb111eebc53c0386c93916f858df1 813 Gene3D G3DSA:3.10.20.590 751 812 2.3E-11 T 11-10-2018 YH65_01965 c3deb111eebc53c0386c93916f858df1 813 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 3 576 8.2E-243 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 YH65_01965 c3deb111eebc53c0386c93916f858df1 813 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 40 51 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 YH65_01965 c3deb111eebc53c0386c93916f858df1 813 Pfam PF09334 tRNA synthetases class I (M) 34 173 1.8E-20 T 11-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 YH65_01965 c3deb111eebc53c0386c93916f858df1 813 PRINTS PR00985 Leucyl-tRNA synthetase signature 562 572 1.6E-39 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 YH65_01965 c3deb111eebc53c0386c93916f858df1 813 PRINTS PR00985 Leucyl-tRNA synthetase signature 214 233 1.6E-39 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 YH65_01965 c3deb111eebc53c0386c93916f858df1 813 PRINTS PR00985 Leucyl-tRNA synthetase signature 151 167 1.6E-39 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 YH65_01965 c3deb111eebc53c0386c93916f858df1 813 PRINTS PR00985 Leucyl-tRNA synthetase signature 529 551 1.6E-39 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 YH65_01965 c3deb111eebc53c0386c93916f858df1 813 PRINTS PR00985 Leucyl-tRNA synthetase signature 125 142 1.6E-39 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 YH65_01965 c3deb111eebc53c0386c93916f858df1 813 PRINTS PR00985 Leucyl-tRNA synthetase signature 488 506 1.6E-39 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 YH65_01965 c3deb111eebc53c0386c93916f858df1 813 Gene3D G3DSA:3.90.740.10 227 416 8.2E-220 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 YH65_01965 c3deb111eebc53c0386c93916f858df1 813 Gene3D G3DSA:1.10.730.10 601 744 1.3E-29 T 11-10-2018 YH65_01965 c3deb111eebc53c0386c93916f858df1 813 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 2 810 20.778 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 YH65_01965 c3deb111eebc53c0386c93916f858df1 813 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 220 404 1.4E-55 T 11-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 YH65_01965 c3deb111eebc53c0386c93916f858df1 813 SUPERFAMILY SSF50677 226 416 1.99E-41 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 YH65_01965 c3deb111eebc53c0386c93916f858df1 813 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 418 619 1.6E-20 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 YH65_01965 c3deb111eebc53c0386c93916f858df1 813 SUPERFAMILY SSF47323 624 810 2.62E-18 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 YH65_01965 c3deb111eebc53c0386c93916f858df1 813 SUPERFAMILY SSF52374 1 628 4.55E-136 T 11-10-2018 YH65_01965 c3deb111eebc53c0386c93916f858df1 813 Gene3D G3DSA:3.40.50.620 32 576 8.2E-220 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YH65_01965 c3deb111eebc53c0386c93916f858df1 813 Gene3D G3DSA:2.30.210.10 577 588 8.2E-220 T 11-10-2018 YH65_09030 f8de749025f95b618602b1ad3359c616 162 PRINTS PR00601 Bacterioferritin signature 1 20 5.3E-15 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 YH65_09030 f8de749025f95b618602b1ad3359c616 162 PRINTS PR00601 Bacterioferritin signature 105 125 5.3E-15 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 YH65_09030 f8de749025f95b618602b1ad3359c616 162 PRINTS PR00601 Bacterioferritin signature 126 147 5.3E-15 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 YH65_09030 f8de749025f95b618602b1ad3359c616 162 PRINTS PR00601 Bacterioferritin signature 42 62 5.3E-15 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 YH65_09030 f8de749025f95b618602b1ad3359c616 162 Gene3D G3DSA:1.20.1260.10 1 161 4.3E-47 T 11-10-2018 IPR012347 Ferritin-like YH65_09030 f8de749025f95b618602b1ad3359c616 162 Pfam PF00210 Ferritin-like domain 6 141 1.7E-31 T 11-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 YH65_09030 f8de749025f95b618602b1ad3359c616 162 PIRSF PIRSF002560 1 154 3.3E-33 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 YH65_09030 f8de749025f95b618602b1ad3359c616 162 SUPERFAMILY SSF47240 2 150 4.92E-41 T 11-10-2018 IPR009078 Ferritin-like superfamily YH65_08260 d90a8f4a974f6737ce01eacb23c90b41 290 SMART SM00881 4 100 4.5E-35 T 11-10-2018 IPR003781 CoA-binding GO:0048037 YH65_08260 d90a8f4a974f6737ce01eacb23c90b41 290 Gene3D G3DSA:3.40.50.720 1 123 1.6E-49 T 11-10-2018 YH65_08260 d90a8f4a974f6737ce01eacb23c90b41 290 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 41.231 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 YH65_08260 d90a8f4a974f6737ce01eacb23c90b41 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 288 6.0E-127 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 YH65_08260 d90a8f4a974f6737ce01eacb23c90b41 290 PIRSF PIRSF001553 1 290 2.7E-124 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 YH65_08260 d90a8f4a974f6737ce01eacb23c90b41 290 SUPERFAMILY SSF51735 1 122 3.53E-41 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily YH65_08260 d90a8f4a974f6737ce01eacb23c90b41 290 Gene3D G3DSA:3.40.50.261 124 289 6.0E-67 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 YH65_08260 d90a8f4a974f6737ce01eacb23c90b41 290 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 2.3E-29 T 11-10-2018 YH65_08260 d90a8f4a974f6737ce01eacb23c90b41 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 2.3E-29 T 11-10-2018 YH65_08260 d90a8f4a974f6737ce01eacb23c90b41 290 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 2.3E-29 T 11-10-2018 YH65_08260 d90a8f4a974f6737ce01eacb23c90b41 290 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 2.3E-29 T 11-10-2018 YH65_08260 d90a8f4a974f6737ce01eacb23c90b41 290 Pfam PF00549 CoA-ligase 151 271 9.3E-13 T 11-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 YH65_08260 d90a8f4a974f6737ce01eacb23c90b41 290 Pfam PF02629 CoA binding domain 6 99 3.6E-29 T 11-10-2018 IPR003781 CoA-binding GO:0048037 YH65_08260 d90a8f4a974f6737ce01eacb23c90b41 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 11-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site YH65_08260 d90a8f4a974f6737ce01eacb23c90b41 290 SUPERFAMILY SSF52210 123 287 3.92E-49 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 YH65_08260 d90a8f4a974f6737ce01eacb23c90b41 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 11-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site YH65_02705 63fa1156111be75aa28b730985e74b51 377 Pfam PF00226 DnaJ domain 5 67 3.0E-28 T 11-10-2018 IPR001623 DnaJ domain YH65_02705 63fa1156111be75aa28b730985e74b51 377 PRINTS PR00625 DnaJ domain signature 42 62 2.0E-30 T 11-10-2018 IPR001623 DnaJ domain YH65_02705 63fa1156111be75aa28b730985e74b51 377 PRINTS PR00625 DnaJ domain signature 62 81 2.0E-30 T 11-10-2018 IPR001623 DnaJ domain YH65_02705 63fa1156111be75aa28b730985e74b51 377 PRINTS PR00625 DnaJ domain signature 7 25 2.0E-30 T 11-10-2018 IPR001623 DnaJ domain YH65_02705 63fa1156111be75aa28b730985e74b51 377 PRINTS PR00625 DnaJ domain signature 25 40 2.0E-30 T 11-10-2018 IPR001623 DnaJ domain YH65_02705 63fa1156111be75aa28b730985e74b51 377 Pfam PF00684 DnaJ central domain 151 210 1.3E-12 T 11-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 YH65_02705 63fa1156111be75aa28b730985e74b51 377 Pfam PF01556 DnaJ C terminal domain 125 335 4.1E-37 T 11-10-2018 IPR002939 Chaperone DnaJ, C-terminal YH65_02705 63fa1156111be75aa28b730985e74b51 377 Gene3D G3DSA:1.10.287.110 2 114 1.3E-37 T 11-10-2018 IPR036869 Chaperone J-domain superfamily YH65_02705 63fa1156111be75aa28b730985e74b51 377 SUPERFAMILY SSF46565 1 110 1.44E-36 T 11-10-2018 IPR036869 Chaperone J-domain superfamily YH65_02705 63fa1156111be75aa28b730985e74b51 377 SUPERFAMILY SSF49493 261 346 1.03E-18 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 YH65_02705 63fa1156111be75aa28b730985e74b51 377 Gene3D G3DSA:2.60.260.20 257 364 5.2E-23 T 11-10-2018 YH65_02705 63fa1156111be75aa28b730985e74b51 377 SMART SM00271 4 62 1.6E-33 T 11-10-2018 IPR001623 DnaJ domain YH65_02705 63fa1156111be75aa28b730985e74b51 377 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 11-10-2018 IPR018253 DnaJ domain, conserved site YH65_02705 63fa1156111be75aa28b730985e74b51 377 SUPERFAMILY SSF57938 138 214 2.49E-18 T 11-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily YH65_02705 63fa1156111be75aa28b730985e74b51 377 Gene3D G3DSA:2.10.230.10 151 210 1.2E-35 T 11-10-2018 YH65_02705 63fa1156111be75aa28b730985e74b51 377 SUPERFAMILY SSF49493 123 256 2.22E-14 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 YH65_02705 63fa1156111be75aa28b730985e74b51 377 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 351 2.0E-124 T 11-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 YH65_02705 63fa1156111be75aa28b730985e74b51 377 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 374 36.171 T 11-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 YH65_02705 63fa1156111be75aa28b730985e74b51 377 Gene3D G3DSA:2.60.260.20 123 251 1.2E-35 T 11-10-2018 YH65_06820 4d0f1f39de38258e06ab7b18684e751a 479 Pfam PF01743 Poly A polymerase head domain 23 149 1.7E-16 T 11-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 YH65_06820 4d0f1f39de38258e06ab7b18684e751a 479 Pfam PF01966 HD domain 295 394 6.1E-6 T 11-10-2018 IPR006674 HD domain YH65_06820 4d0f1f39de38258e06ab7b18684e751a 479 Gene3D G3DSA:3.30.460.10 3 148 3.6E-30 T 11-10-2018 YH65_06820 4d0f1f39de38258e06ab7b18684e751a 479 SUPERFAMILY SSF81891 147 477 1.31E-44 T 11-10-2018 YH65_06820 4d0f1f39de38258e06ab7b18684e751a 479 SUPERFAMILY SSF81301 3 146 6.7E-24 T 11-10-2018 YH65_06820 4d0f1f39de38258e06ab7b18684e751a 479 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 174 237 6.9E-13 T 11-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 YH65_00470 736b1db62db24b2722ba550c7c0f3bbd 746 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 88 125 1.4E-12 T 11-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_00470 736b1db62db24b2722ba550c7c0f3bbd 746 SUPERFAMILY SSF53706 216 588 5.63E-34 T 11-10-2018 YH65_00470 736b1db62db24b2722ba550c7c0f3bbd 746 SUPERFAMILY SSF54292 7 128 5.81E-27 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 YH65_00470 736b1db62db24b2722ba550c7c0f3bbd 746 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 5 81 4.8E-15 T 11-10-2018 YH65_00470 736b1db62db24b2722ba550c7c0f3bbd 746 SMART SM00926 218 268 6.0E-10 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_00470 736b1db62db24b2722ba550c7c0f3bbd 746 Gene3D G3DSA:3.10.20.740 7 128 5.7E-37 T 11-10-2018 YH65_00470 736b1db62db24b2722ba550c7c0f3bbd 746 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 36 53 - T 11-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_00470 736b1db62db24b2722ba550c7c0f3bbd 746 SMART SM00929 88 128 4.7E-14 T 11-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_00470 736b1db62db24b2722ba550c7c0f3bbd 746 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 220 267 3.8E-6 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_00470 736b1db62db24b2722ba550c7c0f3bbd 746 Gene3D G3DSA:3.30.70.20 129 207 1.4E-7 T 11-10-2018 YH65_00470 736b1db62db24b2722ba550c7c0f3bbd 746 Gene3D G3DSA:2.20.25.90 218 268 4.5E-12 T 11-10-2018 YH65_00470 736b1db62db24b2722ba550c7c0f3bbd 746 SUPERFAMILY SSF54862 140 205 4.19E-5 T 11-10-2018 YH65_05890 5a33349f355387291203b778145c27c2 126 TIGRFAM TIGR00494 crcB: protein CrcB 7 121 8.0E-26 T 11-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 YH65_05890 5a33349f355387291203b778145c27c2 126 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 6 122 18.127 T 11-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 YH65_05890 5a33349f355387291203b778145c27c2 126 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 8 117 5.2E-23 T 11-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 YH65_04545 30be4cf4cda04aae1261bbade0429fb6 430 SUPERFAMILY SSF53383 2 427 5.28E-126 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase YH65_04545 30be4cf4cda04aae1261bbade0429fb6 430 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 5 427 1.4E-182 T 11-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 YH65_04545 30be4cf4cda04aae1261bbade0429fb6 430 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 5 428 99.025 T 11-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 YH65_04545 30be4cf4cda04aae1261bbade0429fb6 430 Pfam PF00202 Aminotransferase class-III 36 398 1.5E-71 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YH65_04545 30be4cf4cda04aae1261bbade0429fb6 430 Gene3D G3DSA:3.90.1150.10 9 420 5.1E-165 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 YH65_04545 30be4cf4cda04aae1261bbade0429fb6 430 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 236 272 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YH65_04545 30be4cf4cda04aae1261bbade0429fb6 430 Gene3D G3DSA:3.40.640.10 71 320 5.1E-165 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 YH65_09590 447c6db1458a19a2107e92f5b9682aec 232 Gene3D G3DSA:3.30.1330.60 94 228 3.7E-29 T 11-10-2018 IPR036737 OmpA-like domain superfamily YH65_09590 447c6db1458a19a2107e92f5b9682aec 232 Pfam PF00691 OmpA family 120 214 8.1E-15 T 11-10-2018 IPR006665 OmpA-like domain YH65_09590 447c6db1458a19a2107e92f5b9682aec 232 PRINTS PR01021 OMPA domain signature 166 182 2.7E-5 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YH65_09590 447c6db1458a19a2107e92f5b9682aec 232 PRINTS PR01021 OMPA domain signature 151 166 2.7E-5 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YH65_09590 447c6db1458a19a2107e92f5b9682aec 232 SUPERFAMILY SSF103088 100 220 1.7E-27 T 11-10-2018 IPR036737 OmpA-like domain superfamily YH65_09590 447c6db1458a19a2107e92f5b9682aec 232 Pfam PF13441 YMGG-like Gly-zipper 29 71 9.3E-9 T 11-10-2018 IPR027367 YMGG-like Gly-zipper YH65_09230 bbb204ca8f0407f0613719e4a6b11a7e 214 SMART SM00947 32 202 1.9E-63 T 11-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 YH65_09230 bbb204ca8f0407f0613719e4a6b11a7e 214 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 44 51 - T 11-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 YH65_09230 bbb204ca8f0407f0613719e4a6b11a7e 214 Pfam PF00484 Carbonic anhydrase 39 198 4.8E-48 T 11-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 YH65_09230 bbb204ca8f0407f0613719e4a6b11a7e 214 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 89 109 - T 11-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 YH65_09230 bbb204ca8f0407f0613719e4a6b11a7e 214 Gene3D G3DSA:3.40.1050.10 1 209 1.9E-67 T 11-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 YH65_09230 bbb204ca8f0407f0613719e4a6b11a7e 214 SUPERFAMILY SSF53056 2 208 8.37E-57 T 11-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 YH65_01045 2add7d9f828e23334c5385986450f745 271 Pfam PF00535 Glycosyl transferase family 2 4 138 1.3E-23 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 YH65_01045 2add7d9f828e23334c5385986450f745 271 SUPERFAMILY SSF53448 2 228 1.97E-45 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YH65_01045 2add7d9f828e23334c5385986450f745 271 Gene3D G3DSA:3.90.550.10 1 240 2.2E-40 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YH65_00945 4842b35288fdb7a1e9548dc601b56837 424 SMART SM01192 138 424 1.8E-206 T 11-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YH65_00945 4842b35288fdb7a1e9548dc601b56837 424 Gene3D G3DSA:3.30.390.10 3 125 1.1E-49 T 11-10-2018 IPR029017 Enolase-like, N-terminal YH65_00945 4842b35288fdb7a1e9548dc601b56837 424 ProSitePatterns PS00164 Enolase signature. 334 347 - T 11-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YH65_00945 4842b35288fdb7a1e9548dc601b56837 424 Hamap MF_00318 Enolase [eno]. 2 411 42.51 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YH65_00945 4842b35288fdb7a1e9548dc601b56837 424 SMART SM01193 4 133 4.9E-81 T 11-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YH65_00945 4842b35288fdb7a1e9548dc601b56837 424 Pfam PF00113 Enolase, C-terminal TIM barrel domain 139 419 3.8E-119 T 11-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YH65_00945 4842b35288fdb7a1e9548dc601b56837 424 Gene3D G3DSA:3.20.20.120 127 424 2.7E-130 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily YH65_00945 4842b35288fdb7a1e9548dc601b56837 424 Pfam PF03952 Enolase, N-terminal domain 4 133 8.3E-53 T 11-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YH65_00945 4842b35288fdb7a1e9548dc601b56837 424 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 423 4.3E-203 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YH65_00945 4842b35288fdb7a1e9548dc601b56837 424 SUPERFAMILY SSF51604 137 417 5.09E-120 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily YH65_00945 4842b35288fdb7a1e9548dc601b56837 424 SUPERFAMILY SSF54826 4 135 1.77E-49 T 11-10-2018 YH65_00945 4842b35288fdb7a1e9548dc601b56837 424 PRINTS PR00148 Enolase signature 363 380 5.7E-42 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YH65_00945 4842b35288fdb7a1e9548dc601b56837 424 PRINTS PR00148 Enolase signature 37 51 5.7E-42 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YH65_00945 4842b35288fdb7a1e9548dc601b56837 424 PRINTS PR00148 Enolase signature 334 348 5.7E-42 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YH65_00945 4842b35288fdb7a1e9548dc601b56837 424 PRINTS PR00148 Enolase signature 160 173 5.7E-42 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YH65_00945 4842b35288fdb7a1e9548dc601b56837 424 PRINTS PR00148 Enolase signature 106 122 5.7E-42 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YH65_00945 4842b35288fdb7a1e9548dc601b56837 424 PRINTS PR00148 Enolase signature 311 322 5.7E-42 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YH65_00945 4842b35288fdb7a1e9548dc601b56837 424 PIRSF PIRSF001400 1 424 2.4E-184 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YH65_10120 af2a7bfa86dd0f4eed508c982fe904a1 141 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 7 137 4.4E-58 T 11-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_10120 af2a7bfa86dd0f4eed508c982fe904a1 141 Pfam PF00572 Ribosomal protein L13 16 138 2.4E-52 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 YH65_10120 af2a7bfa86dd0f4eed508c982fe904a1 141 PIRSF PIRSF002181 1 141 3.7E-46 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 YH65_10120 af2a7bfa86dd0f4eed508c982fe904a1 141 ProSitePatterns PS00783 Ribosomal protein L13 signature. 106 128 - T 11-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 YH65_10120 af2a7bfa86dd0f4eed508c982fe904a1 141 SUPERFAMILY SSF52161 4 136 6.02E-52 T 11-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 YH65_10120 af2a7bfa86dd0f4eed508c982fe904a1 141 Gene3D G3DSA:3.90.1180.10 2 141 4.5E-56 T 11-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 YH65_10120 af2a7bfa86dd0f4eed508c982fe904a1 141 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 16 138 26.381 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 YH65_01675 e586713a2658f80c2a72b80d5415582a 133 Pfam PF03459 TOBE domain 67 125 3.6E-8 T 11-10-2018 IPR005116 Transport-associated OB, type 1 YH65_01675 e586713a2658f80c2a72b80d5415582a 133 Gene3D G3DSA:2.40.50.100 64 128 6.0E-14 T 11-10-2018 YH65_01675 e586713a2658f80c2a72b80d5415582a 133 SUPERFAMILY SSF50331 1 127 1.7E-14 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal YH65_08350 2df22430b2aa69ce3442f8d117cd9160 188 SUPERFAMILY SSF50249 67 130 4.71E-18 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold YH65_08350 2df22430b2aa69ce3442f8d117cd9160 188 Gene3D G3DSA:2.40.50.140 66 130 2.6E-21 T 11-10-2018 YH65_08350 2df22430b2aa69ce3442f8d117cd9160 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 7 62 3.7E-26 T 11-10-2018 IPR013185 Translation elongation factor, KOW-like YH65_08350 2df22430b2aa69ce3442f8d117cd9160 188 TIGRFAM TIGR00038 efp: translation elongation factor P 6 187 1.4E-69 T 11-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 YH65_08350 2df22430b2aa69ce3442f8d117cd9160 188 SMART SM00841 132 186 2.9E-26 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 YH65_08350 2df22430b2aa69ce3442f8d117cd9160 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 11-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site YH65_08350 2df22430b2aa69ce3442f8d117cd9160 188 SUPERFAMILY SSF50104 2 65 4.71E-22 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily YH65_08350 2df22430b2aa69ce3442f8d117cd9160 188 PIRSF PIRSF005901 2 188 9.5E-61 T 11-10-2018 IPR020599 Translation elongation factor P/YeiP YH65_08350 2df22430b2aa69ce3442f8d117cd9160 188 SMART SM01185 69 124 2.2E-21 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 YH65_08350 2df22430b2aa69ce3442f8d117cd9160 188 Pfam PF09285 Elongation factor P, C-terminal 132 186 8.2E-20 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 YH65_08350 2df22430b2aa69ce3442f8d117cd9160 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 70 124 2.3E-19 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 YH65_08350 2df22430b2aa69ce3442f8d117cd9160 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 46.615 T 11-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 YH65_08350 2df22430b2aa69ce3442f8d117cd9160 188 Gene3D G3DSA:2.40.50.140 131 187 3.5E-20 T 11-10-2018 YH65_08350 2df22430b2aa69ce3442f8d117cd9160 188 Gene3D G3DSA:2.30.30.30 1 64 1.3E-27 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 YH65_08350 2df22430b2aa69ce3442f8d117cd9160 188 SUPERFAMILY SSF50249 131 187 4.63E-13 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold YH65_06080 a321f4b737c4387e90658b4c89e35d2e 251 SMART SM00967 19 97 2.1E-10 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 YH65_06080 a321f4b737c4387e90658b4c89e35d2e 251 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 19 250 7.0E-48 T 11-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 YH65_06080 a321f4b737c4387e90658b4c89e35d2e 251 Pfam PF00588 SpoU rRNA Methylase family 111 249 1.0E-34 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 YH65_06080 a321f4b737c4387e90658b4c89e35d2e 251 SUPERFAMILY SSF55315 15 91 2.47E-10 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like YH65_06080 a321f4b737c4387e90658b4c89e35d2e 251 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 20 91 2.4E-12 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 YH65_06080 a321f4b737c4387e90658b4c89e35d2e 251 Gene3D G3DSA:3.30.1330.30 14 92 7.3E-9 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like YH65_06080 a321f4b737c4387e90658b4c89e35d2e 251 SUPERFAMILY SSF75217 99 250 1.57E-37 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases YH65_06080 a321f4b737c4387e90658b4c89e35d2e 251 Gene3D G3DSA:3.40.1280.10 94 251 3.4E-45 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YH65_00055 15bf9c6e5284fd1917beb726436f5995 430 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 267 425 3.5E-32 T 11-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 YH65_00055 15bf9c6e5284fd1917beb726436f5995 430 Gene3D G3DSA:3.30.70.1050 1 117 7.9E-16 T 11-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 YH65_00055 15bf9c6e5284fd1917beb726436f5995 430 Pfam PF05697 Bacterial trigger factor protein (TF) 2 145 3.5E-22 T 11-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 YH65_00055 15bf9c6e5284fd1917beb726436f5995 430 Hamap MF_00303 Trigger factor [tig]. 1 430 19.095 T 11-10-2018 IPR005215 Trigger factor GO:0015031 YH65_00055 15bf9c6e5284fd1917beb726436f5995 430 Gene3D G3DSA:3.10.50.40 152 250 1.6E-78 T 11-10-2018 YH65_00055 15bf9c6e5284fd1917beb726436f5995 430 PIRSF PIRSF003095 1 430 1.4E-105 T 11-10-2018 IPR005215 Trigger factor GO:0015031 YH65_00055 15bf9c6e5284fd1917beb726436f5995 430 TIGRFAM TIGR00115 tig: trigger factor 13 424 1.3E-111 T 11-10-2018 IPR005215 Trigger factor GO:0015031 YH65_00055 15bf9c6e5284fd1917beb726436f5995 430 Gene3D G3DSA:1.10.3120.10 118 425 1.6E-78 T 11-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 YH65_00055 15bf9c6e5284fd1917beb726436f5995 430 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 161 241 2.3E-15 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain YH65_00055 15bf9c6e5284fd1917beb726436f5995 430 SUPERFAMILY SSF102735 2 126 3.4E-22 T 11-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 YH65_00055 15bf9c6e5284fd1917beb726436f5995 430 SUPERFAMILY SSF109998 252 426 3.4E-34 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily YH65_00055 15bf9c6e5284fd1917beb726436f5995 430 SUPERFAMILY SSF54534 106 245 1.59E-31 T 11-10-2018 YH65_02135 21d53526299130015f9e444ccb0f97bf 69 Gene3D G3DSA:3.30.1230.10 1 67 1.8E-7 T 11-10-2018 IPR035931 YlxR-like superfamily YH65_02135 21d53526299130015f9e444ccb0f97bf 69 Pfam PF04296 Protein of unknown function (DUF448) 1 59 2.1E-9 T 11-10-2018 IPR007393 Domain of unknown function DUF448 YH65_02135 21d53526299130015f9e444ccb0f97bf 69 SUPERFAMILY SSF64376 1 59 3.66E-9 T 11-10-2018 IPR035931 YlxR-like superfamily YH65_00425 da1433fa18ce29636136385f3f6f66cc 577 Gene3D G3DSA:3.40.50.300 288 511 1.3E-41 T 11-10-2018 YH65_00425 da1433fa18ce29636136385f3f6f66cc 577 SMART SM00382 355 494 9.5E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain YH65_00425 da1433fa18ce29636136385f3f6f66cc 577 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 359 491 1.1E-27 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 YH65_00425 da1433fa18ce29636136385f3f6f66cc 577 SUPERFAMILY SSF52540 325 544 1.77E-37 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_07725 7043eaef770cf18fda91bc9fc4d6d08d 124 Gene3D G3DSA:1.10.10.10 2 113 1.7E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YH65_07725 7043eaef770cf18fda91bc9fc4d6d08d 124 SUPERFAMILY SSF46785 4 106 2.12E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YH65_07725 7043eaef770cf18fda91bc9fc4d6d08d 124 Pfam PF12840 Helix-turn-helix domain 10 84 4.8E-8 T 11-10-2018 YH65_07725 7043eaef770cf18fda91bc9fc4d6d08d 124 SMART SM00418 9 108 1.1E-4 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 YH65_02130 67f796b0a7dd0439c706ea86354ab0ff 292 PIRSF PIRSF000676 1 292 7.7E-80 T 11-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 YH65_02130 67f796b0a7dd0439c706ea86354ab0ff 292 Gene3D G3DSA:3.30.70.890 156 262 4.5E-73 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily YH65_02130 67f796b0a7dd0439c706ea86354ab0ff 292 Pfam PF08544 GHMP kinases C terminal 208 275 3.6E-6 T 11-10-2018 IPR013750 GHMP kinase, C-terminal domain YH65_02130 67f796b0a7dd0439c706ea86354ab0ff 292 TIGRFAM TIGR00191 thrB: homoserine kinase 3 289 2.6E-80 T 11-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 YH65_02130 67f796b0a7dd0439c706ea86354ab0ff 292 PRINTS PR00958 Homoserine kinase signature 163 180 1.5E-30 T 11-10-2018 YH65_02130 67f796b0a7dd0439c706ea86354ab0ff 292 PRINTS PR00958 Homoserine kinase signature 124 137 1.5E-30 T 11-10-2018 YH65_02130 67f796b0a7dd0439c706ea86354ab0ff 292 PRINTS PR00958 Homoserine kinase signature 90 105 1.5E-30 T 11-10-2018 YH65_02130 67f796b0a7dd0439c706ea86354ab0ff 292 PRINTS PR00958 Homoserine kinase signature 8 23 1.5E-30 T 11-10-2018 YH65_02130 67f796b0a7dd0439c706ea86354ab0ff 292 PRINTS PR00958 Homoserine kinase signature 242 257 1.5E-30 T 11-10-2018 YH65_02130 67f796b0a7dd0439c706ea86354ab0ff 292 Pfam PF00288 GHMP kinases N terminal domain 77 137 1.1E-9 T 11-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 YH65_02130 67f796b0a7dd0439c706ea86354ab0ff 292 SUPERFAMILY SSF55060 159 277 2.42E-28 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily YH65_02130 67f796b0a7dd0439c706ea86354ab0ff 292 SUPERFAMILY SSF54211 2 149 4.02E-28 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold YH65_02130 67f796b0a7dd0439c706ea86354ab0ff 292 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 83 94 - T 11-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 YH65_02130 67f796b0a7dd0439c706ea86354ab0ff 292 Gene3D G3DSA:3.30.230.10 3 155 4.5E-73 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YH65_02130 67f796b0a7dd0439c706ea86354ab0ff 292 Hamap MF_00384 Homoserine kinase [thrB]. 3 292 26.952 T 11-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 YH65_00465 4f84429928e6e24293ba4feb0e38a250 669 SUPERFAMILY SSF46548 606 662 6.28E-5 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 YH65_00465 4f84429928e6e24293ba4feb0e38a250 669 SUPERFAMILY SSF51971 451 599 6.47E-9 T 11-10-2018 YH65_00465 4f84429928e6e24293ba4feb0e38a250 669 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 265 575 1.4E-26 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YH65_00465 4f84429928e6e24293ba4feb0e38a250 669 SMART SM00928 60 107 7.7E-9 T 11-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_00465 4f84429928e6e24293ba4feb0e38a250 669 Gene3D G3DSA:3.50.50.60 517 598 3.4E-7 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_00465 4f84429928e6e24293ba4feb0e38a250 669 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 66 145 2.6E-19 T 11-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_00465 4f84429928e6e24293ba4feb0e38a250 669 Gene3D G3DSA:3.50.50.60 368 516 2.3E-29 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_00465 4f84429928e6e24293ba4feb0e38a250 669 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 168 247 1.4E-17 T 11-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 YH65_00465 4f84429928e6e24293ba4feb0e38a250 669 PRINTS PR00419 Adrenodoxin reductase family signature 266 288 7.8E-14 T 11-10-2018 YH65_00465 4f84429928e6e24293ba4feb0e38a250 669 PRINTS PR00419 Adrenodoxin reductase family signature 289 302 7.8E-14 T 11-10-2018 YH65_00465 4f84429928e6e24293ba4feb0e38a250 669 PRINTS PR00419 Adrenodoxin reductase family signature 408 422 7.8E-14 T 11-10-2018 YH65_00465 4f84429928e6e24293ba4feb0e38a250 669 SUPERFAMILY SSF140490 57 152 1.14E-21 T 11-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_00465 4f84429928e6e24293ba4feb0e38a250 669 Gene3D G3DSA:1.10.1060.10 134 261 4.2E-23 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 YH65_00465 4f84429928e6e24293ba4feb0e38a250 669 SUPERFAMILY SSF46548 168 275 4.71E-16 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 YH65_00465 4f84429928e6e24293ba4feb0e38a250 669 Gene3D G3DSA:3.50.50.60 262 367 9.2E-14 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_00465 4f84429928e6e24293ba4feb0e38a250 669 SUPERFAMILY SSF51971 264 518 3.06E-41 T 11-10-2018 YH65_10100 427ae715fbeecb986591e525cb45af6c 483 SUPERFAMILY SSF51905 2 172 2.36E-20 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_10100 427ae715fbeecb986591e525cb45af6c 483 Gene3D G3DSA:3.50.50.100 1 439 7.5E-95 T 11-10-2018 YH65_10100 427ae715fbeecb986591e525cb45af6c 483 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 278 4.1E-11 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YH65_10100 427ae715fbeecb986591e525cb45af6c 483 SUPERFAMILY SSF51905 132 282 5.18E-5 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_06195 89ca5f5f6de40e175391d66a9d151375 150 Pfam PF01161 Phosphatidylethanolamine-binding protein 14 148 5.7E-35 T 11-10-2018 IPR008914 Phosphatidylethanolamine-binding protein YH65_06195 89ca5f5f6de40e175391d66a9d151375 150 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 19 148 5.9E-44 T 11-10-2018 IPR005247 YbhB/YbcL YH65_06195 89ca5f5f6de40e175391d66a9d151375 150 SUPERFAMILY SSF49777 3 149 1.2E-46 T 11-10-2018 IPR036610 PEBP-like superfamily YH65_06195 89ca5f5f6de40e175391d66a9d151375 150 Gene3D G3DSA:3.90.280.10 1 150 8.8E-55 T 11-10-2018 IPR036610 PEBP-like superfamily YH65_07850 aeb64c50c8764d7c64b525b04730fe51 468 ProSitePatterns PS00080 Multicopper oxidases signature 2. 450 461 - T 11-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 YH65_07850 aeb64c50c8764d7c64b525b04730fe51 468 Pfam PF07732 Multicopper oxidase 57 171 5.6E-27 T 11-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 YH65_07850 aeb64c50c8764d7c64b525b04730fe51 468 SUPERFAMILY SSF49503 43 172 2.68E-28 T 11-10-2018 IPR008972 Cupredoxin YH65_07850 aeb64c50c8764d7c64b525b04730fe51 468 Gene3D G3DSA:2.60.40.420 332 468 1.4E-39 T 11-10-2018 IPR008972 Cupredoxin YH65_07850 aeb64c50c8764d7c64b525b04730fe51 468 SUPERFAMILY SSF49503 348 467 3.25E-27 T 11-10-2018 IPR008972 Cupredoxin YH65_07850 aeb64c50c8764d7c64b525b04730fe51 468 Pfam PF07731 Multicopper oxidase 351 467 4.1E-21 T 11-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 YH65_07850 aeb64c50c8764d7c64b525b04730fe51 468 Gene3D G3DSA:2.60.40.420 32 176 1.0E-41 T 11-10-2018 IPR008972 Cupredoxin YH65_07850 aeb64c50c8764d7c64b525b04730fe51 468 Gene3D G3DSA:2.60.40.420 177 331 8.6E-40 T 11-10-2018 IPR008972 Cupredoxin YH65_07850 aeb64c50c8764d7c64b525b04730fe51 468 Pfam PF00394 Multicopper oxidase 234 308 5.7E-4 T 11-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 YH65_07850 aeb64c50c8764d7c64b525b04730fe51 468 SUPERFAMILY SSF49503 177 301 1.41E-20 T 11-10-2018 IPR008972 Cupredoxin YH65_01885 dfacaeba9d066826694181e68cbe712a 352 Pfam PF01817 Chorismate mutase type II 7 83 2.3E-23 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 YH65_01885 dfacaeba9d066826694181e68cbe712a 352 SMART SM00830 7 86 2.9E-26 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 YH65_01885 dfacaeba9d066826694181e68cbe712a 352 PIRSF PIRSF001500 1 350 1.6E-115 T 11-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 YH65_01885 dfacaeba9d066826694181e68cbe712a 352 Gene3D G3DSA:3.30.70.260 266 351 7.2E-18 T 11-10-2018 YH65_01885 dfacaeba9d066826694181e68cbe712a 352 SUPERFAMILY SSF48600 1 80 4.43E-21 T 11-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 YH65_01885 dfacaeba9d066826694181e68cbe712a 352 Gene3D G3DSA:1.20.59.10 1 86 3.6E-26 T 11-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 YH65_01885 dfacaeba9d066826694181e68cbe712a 352 SUPERFAMILY SSF53850 88 271 4.23E-53 T 11-10-2018 YH65_01885 dfacaeba9d066826694181e68cbe712a 352 Gene3D G3DSA:3.40.190.10 88 259 1.3E-51 T 11-10-2018 YH65_01885 dfacaeba9d066826694181e68cbe712a 352 Gene3D G3DSA:3.40.190.10 168 252 1.3E-51 T 11-10-2018 YH65_01885 dfacaeba9d066826694181e68cbe712a 352 TIGRFAM TIGR01807 CM_P2: chorismate mutase 3 76 3.2E-25 T 11-10-2018 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 YH65_01885 dfacaeba9d066826694181e68cbe712a 352 Pfam PF00800 Prephenate dehydratase 88 263 3.3E-57 T 11-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 YH65_01885 dfacaeba9d066826694181e68cbe712a 352 SUPERFAMILY SSF55021 258 345 3.35E-16 T 11-10-2018 YH65_01555 bd47044b49d79472ccf631ce73f57ed2 147 Gene3D G3DSA:3.30.700.10 9 145 9.9E-17 T 11-10-2018 YH65_01555 bd47044b49d79472ccf631ce73f57ed2 147 Pfam PF07963 Prokaryotic N-terminal methylation motif 4 28 4.3E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site YH65_01555 bd47044b49d79472ccf631ce73f57ed2 147 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 29 9.5E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site YH65_01555 bd47044b49d79472ccf631ce73f57ed2 147 SUPERFAMILY SSF54523 9 100 3.14E-14 T 11-10-2018 YH65_09335 c9bc3b74933583572f51451050b13ed3 452 SMART SM00962 95 290 2.0E-103 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 YH65_09335 c9bc3b74933583572f51451050b13ed3 452 Gene3D G3DSA:1.20.120.140 5 300 2.2E-97 T 11-10-2018 YH65_09335 c9bc3b74933583572f51451050b13ed3 452 Pfam PF02881 SRP54-type protein, helical bundle domain 5 75 2.8E-8 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 YH65_09335 c9bc3b74933583572f51451050b13ed3 452 Pfam PF00448 SRP54-type protein, GTPase domain 95 289 5.9E-71 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 YH65_09335 c9bc3b74933583572f51451050b13ed3 452 SUPERFAMILY SSF47446 292 426 1.31E-42 T 11-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 YH65_09335 c9bc3b74933583572f51451050b13ed3 452 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 263 276 - T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 YH65_09335 c9bc3b74933583572f51451050b13ed3 452 SMART SM00963 1 79 7.1E-14 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 YH65_09335 c9bc3b74933583572f51451050b13ed3 452 SUPERFAMILY SSF52540 89 291 5.22E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_09335 c9bc3b74933583572f51451050b13ed3 452 Gene3D G3DSA:1.10.260.30 301 426 1.5E-36 T 11-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 YH65_09335 c9bc3b74933583572f51451050b13ed3 452 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 438 31.239 T 11-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 YH65_09335 c9bc3b74933583572f51451050b13ed3 452 Pfam PF02978 Signal peptide binding domain 321 421 2.0E-28 T 11-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 YH65_09335 c9bc3b74933583572f51451050b13ed3 452 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 424 1.5E-152 T 11-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 YH65_09335 c9bc3b74933583572f51451050b13ed3 452 Gene3D G3DSA:3.40.50.300 85 279 2.2E-97 T 11-10-2018 YH65_09335 c9bc3b74933583572f51451050b13ed3 452 SMART SM00382 94 295 6.4E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain YH65_09335 c9bc3b74933583572f51451050b13ed3 452 SUPERFAMILY SSF47364 1 82 2.49E-14 T 11-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 YH65_00050 9d48a455b78427cf2d194d19ef9e95b4 320 SUPERFAMILY SSF48150 9 211 1.54E-62 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 YH65_00050 9d48a455b78427cf2d194d19ef9e95b4 320 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 38 156 2.6E-13 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 YH65_00050 9d48a455b78427cf2d194d19ef9e95b4 320 Pfam PF00633 Helix-hairpin-helix motif 100 126 5.9E-6 T 11-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 YH65_00050 9d48a455b78427cf2d194d19ef9e95b4 320 SMART SM00478 41 183 2.0E-36 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 YH65_00050 9d48a455b78427cf2d194d19ef9e95b4 320 Gene3D G3DSA:1.10.340.30 23 130 7.7E-72 T 11-10-2018 YH65_00050 9d48a455b78427cf2d194d19ef9e95b4 320 SUPERFAMILY SSF55811 213 315 1.07E-9 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 YH65_00050 9d48a455b78427cf2d194d19ef9e95b4 320 Pfam PF14815 NUDIX domain 226 312 1.6E-9 T 11-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 YH65_00050 9d48a455b78427cf2d194d19ef9e95b4 320 Gene3D G3DSA:1.10.1670.10 11 203 7.7E-72 T 11-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 YH65_01265 8973c3e9b603acb0a0a9a9b8eb6e1d48 337 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 3 305 4.8E-102 T 11-10-2018 IPR017861 Kae1/TsaD family YH65_01265 8973c3e9b603acb0a0a9a9b8eb6e1d48 337 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 2 312 1.4E-106 T 11-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 YH65_01265 8973c3e9b603acb0a0a9a9b8eb6e1d48 337 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 328 52.473 T 11-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 YH65_01265 8973c3e9b603acb0a0a9a9b8eb6e1d48 337 Gene3D G3DSA:3.30.420.40 124 292 3.9E-100 T 11-10-2018 YH65_01265 8973c3e9b603acb0a0a9a9b8eb6e1d48 337 Gene3D G3DSA:3.30.420.40 2 314 3.9E-100 T 11-10-2018 YH65_01265 8973c3e9b603acb0a0a9a9b8eb6e1d48 337 SUPERFAMILY SSF53067 98 305 9.93E-32 T 11-10-2018 YH65_01265 8973c3e9b603acb0a0a9a9b8eb6e1d48 337 SUPERFAMILY SSF53067 1 118 2.85E-19 T 11-10-2018 YH65_01265 8973c3e9b603acb0a0a9a9b8eb6e1d48 337 Pfam PF00814 Glycoprotease family 24 305 4.8E-77 T 11-10-2018 IPR000905 Gcp-like domain YH65_01265 8973c3e9b603acb0a0a9a9b8eb6e1d48 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 126 138 8.2E-38 T 11-10-2018 IPR017861 Kae1/TsaD family YH65_01265 8973c3e9b603acb0a0a9a9b8eb6e1d48 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 149 170 8.2E-38 T 11-10-2018 IPR017861 Kae1/TsaD family YH65_01265 8973c3e9b603acb0a0a9a9b8eb6e1d48 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 3 16 8.2E-38 T 11-10-2018 IPR017861 Kae1/TsaD family YH65_01265 8973c3e9b603acb0a0a9a9b8eb6e1d48 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 93 112 8.2E-38 T 11-10-2018 IPR017861 Kae1/TsaD family YH65_01265 8973c3e9b603acb0a0a9a9b8eb6e1d48 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 72 92 8.2E-38 T 11-10-2018 IPR017861 Kae1/TsaD family YH65_01265 8973c3e9b603acb0a0a9a9b8eb6e1d48 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 262 271 8.2E-38 T 11-10-2018 IPR017861 Kae1/TsaD family YH65_03040 187ff6a34f5822761be55c5c6db4c82a 357 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 15 356 7.3E-110 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 YH65_03040 187ff6a34f5822761be55c5c6db4c82a 357 Pfam PF01116 Fructose-bisphosphate aldolase class-II 19 356 2.9E-91 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 YH65_03040 187ff6a34f5822761be55c5c6db4c82a 357 Gene3D G3DSA:3.20.20.70 2 357 6.1E-146 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YH65_03040 187ff6a34f5822761be55c5c6db4c82a 357 PIRSF PIRSF001359 14 357 4.1E-92 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 YH65_03040 187ff6a34f5822761be55c5c6db4c82a 357 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 99 110 - T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 YH65_03040 187ff6a34f5822761be55c5c6db4c82a 357 SUPERFAMILY SSF51569 5 356 3.66E-131 T 11-10-2018 YH65_03040 187ff6a34f5822761be55c5c6db4c82a 357 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 170 181 - T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 YH65_03040 187ff6a34f5822761be55c5c6db4c82a 357 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 5 356 1.1E-168 T 11-10-2018 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 YH65_01585 26fc5d5083807175d86677a0d4f3650e 463 Pfam PF02913 FAD linked oxidases, C-terminal domain 216 457 6.9E-64 T 11-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 YH65_01585 26fc5d5083807175d86677a0d4f3650e 463 Pfam PF01565 FAD binding domain 40 179 4.9E-41 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 YH65_01585 26fc5d5083807175d86677a0d4f3650e 463 Gene3D G3DSA:3.30.465.40 3 236 3.3E-73 T 11-10-2018 YH65_01585 26fc5d5083807175d86677a0d4f3650e 463 Gene3D G3DSA:3.30.70.2740 336 418 1.0E-17 T 11-10-2018 YH65_01585 26fc5d5083807175d86677a0d4f3650e 463 SUPERFAMILY SSF56176 5 217 5.61E-71 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 YH65_01585 26fc5d5083807175d86677a0d4f3650e 463 SUPERFAMILY SSF55103 221 460 6.05E-68 T 11-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 YH65_01585 26fc5d5083807175d86677a0d4f3650e 463 Gene3D G3DSA:1.10.45.10 419 458 3.8E-11 T 11-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 YH65_06515 7b21fc8470dfb857c16a7d0696afe133 307 SUPERFAMILY SSF51730 4 305 3.92E-44 T 11-10-2018 IPR029041 FAD-linked oxidoreductase-like YH65_06515 7b21fc8470dfb857c16a7d0696afe133 307 Pfam PF02219 Methylenetetrahydrofolate reductase 11 303 1.4E-23 T 11-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 YH65_06515 7b21fc8470dfb857c16a7d0696afe133 307 Gene3D G3DSA:3.20.20.220 6 307 7.2E-34 T 11-10-2018 YH65_09265 2b16cedc2cb764c55f7f98068701c5fe 255 PIRSF PIRSF010376 1 255 5.2E-55 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 YH65_09265 2b16cedc2cb764c55f7f98068701c5fe 255 SUPERFAMILY SSF55060 165 253 1.29E-7 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily YH65_09265 2b16cedc2cb764c55f7f98068701c5fe 255 Gene3D G3DSA:3.30.70.890 164 255 1.3E-5 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily YH65_09265 2b16cedc2cb764c55f7f98068701c5fe 255 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 3 254 1.2E-51 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 YH65_09265 2b16cedc2cb764c55f7f98068701c5fe 255 SUPERFAMILY SSF54211 1 159 9.87E-29 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold YH65_09265 2b16cedc2cb764c55f7f98068701c5fe 255 Pfam PF00288 GHMP kinases N terminal domain 87 143 5.2E-7 T 11-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 YH65_09265 2b16cedc2cb764c55f7f98068701c5fe 255 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 2 255 19.8 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 YH65_09265 2b16cedc2cb764c55f7f98068701c5fe 255 Gene3D G3DSA:3.30.230.10 1 160 1.9E-41 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YH65_00855 4aee18a71fa0b1ba6190a428ea137d50 376 Pfam PF02080 TrkA-C domain 294 364 1.9E-12 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YH65_00855 4aee18a71fa0b1ba6190a428ea137d50 376 Gene3D G3DSA:1.10.287.70 25 137 6.9E-20 T 11-10-2018 YH65_00855 4aee18a71fa0b1ba6190a428ea137d50 376 SUPERFAMILY SSF51735 133 280 8.37E-18 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily YH65_00855 4aee18a71fa0b1ba6190a428ea137d50 376 Pfam PF02254 TrkA-N domain 137 258 2.5E-17 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 YH65_00855 4aee18a71fa0b1ba6190a428ea137d50 376 Pfam PF07885 Ion channel 40 113 4.0E-14 T 11-10-2018 IPR013099 Potassium channel domain YH65_00855 4aee18a71fa0b1ba6190a428ea137d50 376 Gene3D G3DSA:3.40.50.720 138 284 5.1E-20 T 11-10-2018 YH65_00855 4aee18a71fa0b1ba6190a428ea137d50 376 SUPERFAMILY SSF116726 283 363 1.83E-13 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 YH65_00855 4aee18a71fa0b1ba6190a428ea137d50 376 SUPERFAMILY SSF81324 24 155 2.35E-21 T 11-10-2018 YH65_00855 4aee18a71fa0b1ba6190a428ea137d50 376 Gene3D G3DSA:3.30.70.1450 292 368 5.3E-15 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 YH65_07835 0b988a8fc0c1bb7c7805c27c77b0994c 217 SUPERFAMILY SSF52172 1 121 1.18E-24 T 11-10-2018 IPR011006 CheY-like superfamily YH65_07835 0b988a8fc0c1bb7c7805c27c77b0994c 217 Pfam PF00072 Response regulator receiver domain 4 114 1.3E-17 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YH65_07835 0b988a8fc0c1bb7c7805c27c77b0994c 217 SUPERFAMILY SSF46894 122 215 1.5E-17 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YH65_07835 0b988a8fc0c1bb7c7805c27c77b0994c 217 Gene3D G3DSA:3.40.50.2300 1 117 2.3E-25 T 11-10-2018 YH65_07835 0b988a8fc0c1bb7c7805c27c77b0994c 217 Gene3D G3DSA:1.10.10.10 118 215 4.7E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YH65_07835 0b988a8fc0c1bb7c7805c27c77b0994c 217 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 214 1.7E-13 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YH65_07835 0b988a8fc0c1bb7c7805c27c77b0994c 217 SMART SM00448 2 113 1.6E-17 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YH65_07835 0b988a8fc0c1bb7c7805c27c77b0994c 217 SMART SM00862 143 214 7.4E-14 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YH65_10440 30673c305d59eae431826fde7676dff2 491 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 62 179 9.9E-7 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YH65_10440 30673c305d59eae431826fde7676dff2 491 SUPERFAMILY SSF51905 196 353 6.47E-15 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_10440 30673c305d59eae431826fde7676dff2 491 Gene3D G3DSA:3.50.50.60 62 417 1.0E-75 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_10440 30673c305d59eae431826fde7676dff2 491 Gene3D G3DSA:3.50.50.60 176 353 1.0E-75 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_10440 30673c305d59eae431826fde7676dff2 491 SUPERFAMILY SSF51905 62 422 1.42E-23 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_08915 a4e75bb8f8bbb68f68548d48e6d01c4a 648 SUPERFAMILY SSF47781 394 554 2.22E-46 T 11-10-2018 IPR010994 RuvA domain 2-like YH65_08915 a4e75bb8f8bbb68f68548d48e6d01c4a 648 SUPERFAMILY SSF50249 309 390 3.6E-28 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold YH65_08915 a4e75bb8f8bbb68f68548d48e6d01c4a 648 SUPERFAMILY SSF56091 5 306 2.08E-108 T 11-10-2018 YH65_08915 a4e75bb8f8bbb68f68548d48e6d01c4a 648 Gene3D G3DSA:1.10.287.610 8 65 4.1E-18 T 11-10-2018 YH65_08915 a4e75bb8f8bbb68f68548d48e6d01c4a 648 Gene3D G3DSA:3.40.50.10190 572 648 3.8E-26 T 11-10-2018 IPR036420 BRCT domain superfamily YH65_08915 a4e75bb8f8bbb68f68548d48e6d01c4a 648 Pfam PF14520 Helix-hairpin-helix domain 436 486 3.2E-4 T 11-10-2018 YH65_08915 a4e75bb8f8bbb68f68548d48e6d01c4a 648 Hamap MF_01588 DNA ligase [ligA]. 3 648 49.146 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 YH65_08915 a4e75bb8f8bbb68f68548d48e6d01c4a 648 Pfam PF12826 Helix-hairpin-helix motif 497 552 1.0E-9 T 11-10-2018 YH65_08915 a4e75bb8f8bbb68f68548d48e6d01c4a 648 Gene3D G3DSA:3.30.470.90 66 308 4.7E-87 T 11-10-2018 YH65_08915 a4e75bb8f8bbb68f68548d48e6d01c4a 648 SMART SM00278 433 452 350.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 YH65_08915 a4e75bb8f8bbb68f68548d48e6d01c4a 648 SMART SM00278 499 518 910.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 YH65_08915 a4e75bb8f8bbb68f68548d48e6d01c4a 648 SMART SM00278 529 548 0.52 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 YH65_08915 a4e75bb8f8bbb68f68548d48e6d01c4a 648 SMART SM00278 467 486 3.1 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 YH65_08915 a4e75bb8f8bbb68f68548d48e6d01c4a 648 SUPERFAMILY SSF52113 573 646 3.27E-20 T 11-10-2018 IPR036420 BRCT domain superfamily YH65_08915 a4e75bb8f8bbb68f68548d48e6d01c4a 648 Gene3D G3DSA:1.10.150.20 419 491 1.7E-24 T 11-10-2018 YH65_08915 a4e75bb8f8bbb68f68548d48e6d01c4a 648 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 11 644 4.4E-232 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 YH65_08915 a4e75bb8f8bbb68f68548d48e6d01c4a 648 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 312 388 7.0E-34 T 11-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 YH65_08915 a4e75bb8f8bbb68f68548d48e6d01c4a 648 PIRSF PIRSF001604 2 648 1.1E-231 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 YH65_08915 a4e75bb8f8bbb68f68548d48e6d01c4a 648 Gene3D G3DSA:1.10.150.20 492 562 2.3E-11 T 11-10-2018 YH65_08915 a4e75bb8f8bbb68f68548d48e6d01c4a 648 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 574 647 7.1E-13 T 11-10-2018 IPR001357 BRCT domain YH65_08915 a4e75bb8f8bbb68f68548d48e6d01c4a 648 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 110 139 - T 11-10-2018 IPR018239 NAD-dependent DNA ligase, active site YH65_08915 a4e75bb8f8bbb68f68548d48e6d01c4a 648 Gene3D G3DSA:2.40.50.140 309 395 6.3E-33 T 11-10-2018 YH65_08915 a4e75bb8f8bbb68f68548d48e6d01c4a 648 SMART SM00532 1 435 7.0E-234 T 11-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 YH65_08915 a4e75bb8f8bbb68f68548d48e6d01c4a 648 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 9 307 6.6E-110 T 11-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 YH65_08915 a4e75bb8f8bbb68f68548d48e6d01c4a 648 SMART SM00292 575 648 2.7E-12 T 11-10-2018 IPR001357 BRCT domain YH65_02730 2e92353e667b72db5a3ec993b4c3110d 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 2.8E-36 T 11-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_02730 2e92353e667b72db5a3ec993b4c3110d 89 SMART SM01387 8 88 1.5E-48 T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YH65_02730 2e92353e667b72db5a3ec993b4c3110d 89 Pfam PF00312 Ribosomal protein S15 8 88 1.2E-34 T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YH65_02730 2e92353e667b72db5a3ec993b4c3110d 89 Gene3D G3DSA:1.10.287.10 1 89 1.6E-32 T 11-10-2018 YH65_02730 2e92353e667b72db5a3ec993b4c3110d 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 8.0E-25 T 11-10-2018 YH65_02730 2e92353e667b72db5a3ec993b4c3110d 89 SUPERFAMILY SSF47060 3 88 5.3E-33 T 11-10-2018 IPR009068 S15/NS1, RNA-binding YH65_02730 2e92353e667b72db5a3ec993b4c3110d 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.367 T 11-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_02730 2e92353e667b72db5a3ec993b4c3110d 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YH65_03870 118a808714b35b6c3f3d088180d65b0e 175 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 3 160 33.546 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 YH65_03870 118a808714b35b6c3f3d088180d65b0e 175 Gene3D G3DSA:3.30.1060.10 1 165 2.6E-64 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 YH65_03870 118a808714b35b6c3f3d088180d65b0e 175 Pfam PF01625 Peptide methionine sulfoxide reductase 6 156 2.8E-58 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 YH65_03870 118a808714b35b6c3f3d088180d65b0e 175 SUPERFAMILY SSF55068 4 166 4.58E-67 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 YH65_03870 118a808714b35b6c3f3d088180d65b0e 175 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 5 155 2.0E-55 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 YH65_08860 ba224b65ff3f652cb3fdee1e60efa712 1030 Gene3D G3DSA:3.30.70.1430 42 818 4.4E-212 T 11-10-2018 YH65_08860 ba224b65ff3f652cb3fdee1e60efa712 1030 Gene3D G3DSA:1.20.1640.10 498 1020 4.4E-212 T 11-10-2018 YH65_08860 ba224b65ff3f652cb3fdee1e60efa712 1030 Pfam PF00873 AcrB/AcrD/AcrF family 6 1023 5.3E-138 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_08860 ba224b65ff3f652cb3fdee1e60efa712 1030 SUPERFAMILY SSF82866 291 486 8.11E-39 T 11-10-2018 YH65_08860 ba224b65ff3f652cb3fdee1e60efa712 1030 SUPERFAMILY SSF82693 140 321 1.36E-8 T 11-10-2018 YH65_08860 ba224b65ff3f652cb3fdee1e60efa712 1030 Gene3D G3DSA:1.20.1640.10 17 497 4.4E-212 T 11-10-2018 YH65_08860 ba224b65ff3f652cb3fdee1e60efa712 1030 Gene3D G3DSA:3.30.2090.10 178 268 4.4E-212 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YH65_08860 ba224b65ff3f652cb3fdee1e60efa712 1030 Gene3D G3DSA:3.30.2090.10 725 810 4.4E-212 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YH65_08860 ba224b65ff3f652cb3fdee1e60efa712 1030 SUPERFAMILY SSF82693 43 134 3.66E-13 T 11-10-2018 YH65_08860 ba224b65ff3f652cb3fdee1e60efa712 1030 PRINTS PR00702 Acriflavin resistance protein family signature 435 458 7.7E-22 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_08860 ba224b65ff3f652cb3fdee1e60efa712 1030 PRINTS PR00702 Acriflavin resistance protein family signature 328 351 7.7E-22 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_08860 ba224b65ff3f652cb3fdee1e60efa712 1030 PRINTS PR00702 Acriflavin resistance protein family signature 460 483 7.7E-22 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_08860 ba224b65ff3f652cb3fdee1e60efa712 1030 PRINTS PR00702 Acriflavin resistance protein family signature 382 406 7.7E-22 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_08860 ba224b65ff3f652cb3fdee1e60efa712 1030 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 7.7E-22 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_08860 ba224b65ff3f652cb3fdee1e60efa712 1030 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 7.7E-22 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_08860 ba224b65ff3f652cb3fdee1e60efa712 1030 Gene3D G3DSA:3.30.70.1320 136 324 4.4E-212 T 11-10-2018 YH65_08860 ba224b65ff3f652cb3fdee1e60efa712 1030 SUPERFAMILY SSF82866 810 1027 1.7E-40 T 11-10-2018 YH65_08860 ba224b65ff3f652cb3fdee1e60efa712 1030 Gene3D G3DSA:3.30.70.1440 673 868 4.4E-212 T 11-10-2018 YH65_08860 ba224b65ff3f652cb3fdee1e60efa712 1030 Gene3D G3DSA:3.30.70.1430 546 672 4.4E-212 T 11-10-2018 YH65_00885 b877870e9cb670ffb66203e8421441de 174 Gene3D G3DSA:2.160.10.10 1 174 4.3E-63 T 11-10-2018 YH65_00885 b877870e9cb670ffb66203e8421441de 174 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 95 130 8.0E-8 T 11-10-2018 IPR001451 Hexapeptide repeat YH65_00885 b877870e9cb670ffb66203e8421441de 174 SUPERFAMILY SSF51161 4 172 6.38E-49 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily YH65_09920 971a7f00759303e4b845ab85705b0256 425 SUPERFAMILY SSF55021 345 414 1.16E-13 T 11-10-2018 YH65_09920 971a7f00759303e4b845ab85705b0256 425 SUPERFAMILY SSF51735 1 151 4.89E-31 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily YH65_09920 971a7f00759303e4b845ab85705b0256 425 SUPERFAMILY SSF55347 130 300 2.22E-52 T 11-10-2018 YH65_09920 971a7f00759303e4b845ab85705b0256 425 PIRSF PIRSF000098 1 425 1.3E-156 T 11-10-2018 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 YH65_09920 971a7f00759303e4b845ab85705b0256 425 Pfam PF01842 ACT domain 346 412 2.3E-14 T 11-10-2018 IPR002912 ACT domain YH65_09920 971a7f00759303e4b845ab85705b0256 425 Gene3D G3DSA:3.30.360.10 129 340 8.9E-150 T 11-10-2018 YH65_09920 971a7f00759303e4b845ab85705b0256 425 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 8 111 2.5E-12 T 11-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 YH65_09920 971a7f00759303e4b845ab85705b0256 425 Gene3D G3DSA:3.40.50.720 2 332 8.9E-150 T 11-10-2018 YH65_09920 971a7f00759303e4b845ab85705b0256 425 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 176 198 - T 11-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 YH65_09920 971a7f00759303e4b845ab85705b0256 425 Pfam PF00742 Homoserine dehydrogenase 130 313 2.5E-63 T 11-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 YH65_09920 971a7f00759303e4b845ab85705b0256 425 Gene3D G3DSA:3.30.70.260 341 414 8.9E-150 T 11-10-2018 YH65_01355 3d320dae0eff023665fd85df11053e05 163 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 1 162 6.1E-23 T 11-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 YH65_01355 3d320dae0eff023665fd85df11053e05 163 Gene3D G3DSA:3.90.1140.10 1 163 1.4E-27 T 11-10-2018 YH65_01355 3d320dae0eff023665fd85df11053e05 163 SUPERFAMILY SSF55144 1 162 4.71E-21 T 11-10-2018 IPR009097 Cyclic phosphodiesterase YH65_01355 3d320dae0eff023665fd85df11053e05 163 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 1 163 15.469 T 11-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 YH65_01355 3d320dae0eff023665fd85df11053e05 163 Pfam PF02834 LigT like Phosphoesterase 15 80 1.1E-7 T 11-10-2018 IPR014051 Phosphoesterase, HXTX YH65_08850 12e4933b7ef3f223b6f90f56cd312e66 501 Pfam PF13175 AAA ATPase domain 1 425 1.9E-34 T 11-10-2018 YH65_08850 12e4933b7ef3f223b6f90f56cd312e66 501 PIRSF PIRSF034888 1 103 2.9E-16 T 11-10-2018 IPR014592 Predicted P-loop ATP-binding protein, VCA0200 YH65_08850 12e4933b7ef3f223b6f90f56cd312e66 501 PIRSF PIRSF034888 284 489 4.4E-35 T 11-10-2018 IPR014592 Predicted P-loop ATP-binding protein, VCA0200 YH65_08850 12e4933b7ef3f223b6f90f56cd312e66 501 SUPERFAMILY SSF52540 1 440 9.49E-13 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_05080 ce36c22d6df1c8a40ae63fbe0ad386a0 72 PRINTS PR00050 Cold shock protein signature 45 63 1.2E-15 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YH65_05080 ce36c22d6df1c8a40ae63fbe0ad386a0 72 PRINTS PR00050 Cold shock protein signature 7 22 1.2E-15 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YH65_05080 ce36c22d6df1c8a40ae63fbe0ad386a0 72 PRINTS PR00050 Cold shock protein signature 28 37 1.2E-15 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YH65_05080 ce36c22d6df1c8a40ae63fbe0ad386a0 72 SUPERFAMILY SSF50249 3 71 4.0E-23 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold YH65_05080 ce36c22d6df1c8a40ae63fbe0ad386a0 72 Gene3D G3DSA:2.40.50.140 3 70 6.1E-27 T 11-10-2018 YH65_05080 ce36c22d6df1c8a40ae63fbe0ad386a0 72 Pfam PF00313 'Cold-shock' DNA-binding domain 6 70 2.6E-27 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YH65_05080 ce36c22d6df1c8a40ae63fbe0ad386a0 72 SMART SM00357 6 72 9.1E-25 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 YH65_05080 ce36c22d6df1c8a40ae63fbe0ad386a0 72 PIRSF PIRSF002599 1 72 1.4E-23 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 YH65_05080 ce36c22d6df1c8a40ae63fbe0ad386a0 72 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 11-10-2018 IPR019844 Cold-shock conserved site YH65_08785 14e63a4febe8a1b25bf1082f94fb3873 96 SUPERFAMILY SSF141000 2 94 1.19E-20 T 11-10-2018 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C GO:0006450 YH65_08785 14e63a4febe8a1b25bf1082f94fb3873 96 Gene3D G3DSA:1.10.20.60 1 94 2.1E-21 T 11-10-2018 YH65_08785 14e63a4febe8a1b25bf1082f94fb3873 96 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 3 96 1.9E-21 T 11-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 YH65_08785 14e63a4febe8a1b25bf1082f94fb3873 96 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 21 91 2.3E-15 T 11-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 YH65_08785 14e63a4febe8a1b25bf1082f94fb3873 96 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 96 18.013 T 11-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 YH65_00840 e6e1528c9258a1c7829ca76129285a6a 453 Pfam PF00271 Helicase conserved C-terminal domain 226 333 6.7E-26 T 11-10-2018 IPR001650 Helicase, C-terminal YH65_00840 e6e1528c9258a1c7829ca76129285a6a 453 Pfam PF00270 DEAD/DEAH box helicase 27 192 1.7E-49 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 YH65_00840 e6e1528c9258a1c7829ca76129285a6a 453 SMART SM00487 22 217 7.5E-58 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain YH65_00840 e6e1528c9258a1c7829ca76129285a6a 453 Gene3D G3DSA:3.30.70.330 380 450 3.1E-20 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily YH65_00840 e6e1528c9258a1c7829ca76129285a6a 453 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 151 159 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site YH65_00840 e6e1528c9258a1c7829ca76129285a6a 453 Pfam PF03880 DbpA RNA binding domain 381 447 3.6E-19 T 11-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain YH65_00840 e6e1528c9258a1c7829ca76129285a6a 453 SMART SM00490 253 334 6.8E-29 T 11-10-2018 IPR001650 Helicase, C-terminal YH65_00840 e6e1528c9258a1c7829ca76129285a6a 453 Gene3D G3DSA:3.40.50.300 1 207 4.8E-71 T 11-10-2018 YH65_00840 e6e1528c9258a1c7829ca76129285a6a 453 SUPERFAMILY SSF52540 70 350 1.95E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_00840 e6e1528c9258a1c7829ca76129285a6a 453 Gene3D G3DSA:3.40.50.300 209 376 6.9E-44 T 11-10-2018 YH65_07755 1f224afcb4b2007bbfb758d760467f2a 113 Pfam PF01022 Bacterial regulatory protein, arsR family 13 59 4.4E-15 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 YH65_07755 1f224afcb4b2007bbfb758d760467f2a 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 28 39 8.5E-16 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 YH65_07755 1f224afcb4b2007bbfb758d760467f2a 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 8 23 8.5E-16 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 YH65_07755 1f224afcb4b2007bbfb758d760467f2a 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 56 71 8.5E-16 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 YH65_07755 1f224afcb4b2007bbfb758d760467f2a 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 41 56 8.5E-16 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 YH65_07755 1f224afcb4b2007bbfb758d760467f2a 113 SMART SM00418 6 84 2.2E-20 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 YH65_07755 1f224afcb4b2007bbfb758d760467f2a 113 SUPERFAMILY SSF46785 3 78 4.51E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YH65_07755 1f224afcb4b2007bbfb758d760467f2a 113 Gene3D G3DSA:1.10.10.10 1 86 1.8E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YH65_01830 b952c3722d08f3e5c1806ee0fc8aa0af 294 SUPERFAMILY SSF53671 1 289 2.88E-84 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 YH65_01830 b952c3722d08f3e5c1806ee0fc8aa0af 294 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 43 50 - T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YH65_01830 b952c3722d08f3e5c1806ee0fc8aa0af 294 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 254 277 6.0E-21 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YH65_01830 b952c3722d08f3e5c1806ee0fc8aa0af 294 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 43 62 6.0E-21 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YH65_01830 b952c3722d08f3e5c1806ee0fc8aa0af 294 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 127 138 6.0E-21 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YH65_01830 b952c3722d08f3e5c1806ee0fc8aa0af 294 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 242 251 6.0E-21 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YH65_01830 b952c3722d08f3e5c1806ee0fc8aa0af 294 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 2 289 5.9E-87 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 YH65_01830 b952c3722d08f3e5c1806ee0fc8aa0af 294 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 1 291 35.729 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 YH65_01830 b952c3722d08f3e5c1806ee0fc8aa0af 294 PRINTS PR00101 Aspartate carbamoyltransferase signature 207 216 1.4E-30 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 YH65_01830 b952c3722d08f3e5c1806ee0fc8aa0af 294 PRINTS PR00101 Aspartate carbamoyltransferase signature 126 143 1.4E-30 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 YH65_01830 b952c3722d08f3e5c1806ee0fc8aa0af 294 PRINTS PR00101 Aspartate carbamoyltransferase signature 33 55 1.4E-30 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 YH65_01830 b952c3722d08f3e5c1806ee0fc8aa0af 294 PRINTS PR00101 Aspartate carbamoyltransferase signature 270 284 1.4E-30 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 YH65_01830 b952c3722d08f3e5c1806ee0fc8aa0af 294 PRINTS PR00101 Aspartate carbamoyltransferase signature 71 80 1.4E-30 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 YH65_01830 b952c3722d08f3e5c1806ee0fc8aa0af 294 PRINTS PR00101 Aspartate carbamoyltransferase signature 246 251 1.4E-30 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 YH65_01830 b952c3722d08f3e5c1806ee0fc8aa0af 294 Gene3D G3DSA:3.40.50.1370 127 276 4.2E-85 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 YH65_01830 b952c3722d08f3e5c1806ee0fc8aa0af 294 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 147 287 2.7E-21 T 11-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 YH65_01830 b952c3722d08f3e5c1806ee0fc8aa0af 294 Gene3D G3DSA:3.40.50.1370 3 286 4.2E-85 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 YH65_01830 b952c3722d08f3e5c1806ee0fc8aa0af 294 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 3 140 3.4E-40 T 11-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 YH65_07620 3d0e0e8b5abf1751e2802f14705c710f 184 Pfam PF01066 CDP-alcohol phosphatidyltransferase 3 79 2.4E-15 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 YH65_07620 3d0e0e8b5abf1751e2802f14705c710f 184 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 57 79 - T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 YH65_07620 3d0e0e8b5abf1751e2802f14705c710f 184 PIRSF PIRSF000847 1 183 1.2E-47 T 11-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 YH65_07620 3d0e0e8b5abf1751e2802f14705c710f 184 Gene3D G3DSA:1.20.120.1760 3 181 1.2E-13 T 11-10-2018 YH65_07620 3d0e0e8b5abf1751e2802f14705c710f 184 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2 178 8.3E-48 T 11-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 YH65_10405 4cf5fd6110abc9720fe2ae8099d70cf8 138 Pfam PF13899 Thioredoxin-like 15 104 2.0E-11 T 11-10-2018 YH65_10405 4cf5fd6110abc9720fe2ae8099d70cf8 138 Gene3D G3DSA:3.40.30.10 11 138 5.5E-24 T 11-10-2018 YH65_10405 4cf5fd6110abc9720fe2ae8099d70cf8 138 SUPERFAMILY SSF52833 14 134 4.18E-21 T 11-10-2018 IPR036249 Thioredoxin-like superfamily YH65_00970 49582b78468e6d98531e2715f9c6b0ba 732 SUPERFAMILY SSF57783 614 653 9.86E-13 T 11-10-2018 YH65_00970 49582b78468e6d98531e2715f9c6b0ba 732 Gene3D G3DSA:1.10.460.10 137 546 5.6E-159 T 11-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 YH65_00970 49582b78468e6d98531e2715f9c6b0ba 732 Gene3D G3DSA:3.30.65.10 612 657 4.5E-15 T 11-10-2018 YH65_00970 49582b78468e6d98531e2715f9c6b0ba 732 Gene3D G3DSA:3.30.65.10 557 611 5.8E-13 T 11-10-2018 YH65_00970 49582b78468e6d98531e2715f9c6b0ba 732 Gene3D G3DSA:3.30.65.10 658 701 4.1E-5 T 11-10-2018 YH65_00970 49582b78468e6d98531e2715f9c6b0ba 732 SUPERFAMILY SSF57783 571 612 9.18E-13 T 11-10-2018 YH65_00970 49582b78468e6d98531e2715f9c6b0ba 732 SUPERFAMILY SSF57783 654 693 6.12E-11 T 11-10-2018 YH65_00970 49582b78468e6d98531e2715f9c6b0ba 732 SMART SM00437 244 506 2.5E-113 T 11-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 YH65_00970 49582b78468e6d98531e2715f9c6b0ba 732 Gene3D G3DSA:2.70.20.10 186 453 5.6E-159 T 11-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 YH65_00970 49582b78468e6d98531e2715f9c6b0ba 732 SMART SM00493 2 105 3.9E-30 T 11-10-2018 IPR006171 TOPRIM domain YH65_00970 49582b78468e6d98531e2715f9c6b0ba 732 Gene3D G3DSA:3.40.50.140 1 136 2.6E-49 T 11-10-2018 YH65_00970 49582b78468e6d98531e2715f9c6b0ba 732 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 281 303 - T 11-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 YH65_00970 49582b78468e6d98531e2715f9c6b0ba 732 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 164 182 8.1E-34 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 YH65_00970 49582b78468e6d98531e2715f9c6b0ba 732 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 79 92 8.1E-34 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 YH65_00970 49582b78468e6d98531e2715f9c6b0ba 732 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 372 388 8.1E-34 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 YH65_00970 49582b78468e6d98531e2715f9c6b0ba 732 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 469 483 8.1E-34 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 YH65_00970 49582b78468e6d98531e2715f9c6b0ba 732 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 294 303 8.1E-34 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 YH65_00970 49582b78468e6d98531e2715f9c6b0ba 732 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 571 606 4.0E-16 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 YH65_00970 49582b78468e6d98531e2715f9c6b0ba 732 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 618 654 6.6E-15 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 YH65_00970 49582b78468e6d98531e2715f9c6b0ba 732 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 662 696 1.1E-13 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 YH65_00970 49582b78468e6d98531e2715f9c6b0ba 732 Pfam PF01751 Toprim domain 4 115 2.1E-28 T 11-10-2018 IPR006171 TOPRIM domain YH65_00970 49582b78468e6d98531e2715f9c6b0ba 732 SMART SM00436 106 194 1.0E-49 T 11-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 YH65_00970 49582b78468e6d98531e2715f9c6b0ba 732 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 4 606 1.4E-244 T 11-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 YH65_00970 49582b78468e6d98531e2715f9c6b0ba 732 Gene3D G3DSA:1.10.290.10 252 387 5.6E-159 T 11-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 YH65_00970 49582b78468e6d98531e2715f9c6b0ba 732 Pfam PF01131 DNA topoisomerase 130 543 7.5E-133 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 YH65_00970 49582b78468e6d98531e2715f9c6b0ba 732 SUPERFAMILY SSF56712 1 584 3.01E-188 T 11-10-2018 IPR023405 DNA topoisomerase, type IA, core domain YH65_00970 49582b78468e6d98531e2715f9c6b0ba 732 Hamap MF_00952 DNA topoisomerase 1 [topA]. 2 684 55.084 T 11-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 YH65_08600 918350b61f261093556595eec4d44c35 1113 Gene3D G3DSA:2.40.40.20 818 964 2.3E-21 T 11-10-2018 YH65_08600 918350b61f261093556595eec4d44c35 1113 Pfam PF01568 Molydopterin dinucleotide binding domain 868 950 5.3E-7 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 YH65_08600 918350b61f261093556595eec4d44c35 1113 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 10 31 9.3E-4 T 11-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal YH65_08600 918350b61f261093556595eec4d44c35 1113 Gene3D G3DSA:2.20.25.90 93 166 2.1E-11 T 11-10-2018 YH65_08600 918350b61f261093556595eec4d44c35 1113 SUPERFAMILY SSF53706 99 821 2.9E-82 T 11-10-2018 YH65_08600 918350b61f261093556595eec4d44c35 1113 SUPERFAMILY SSF50692 853 1054 2.49E-18 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily YH65_08600 918350b61f261093556595eec4d44c35 1113 Pfam PF00384 Molybdopterin oxidoreductase 166 616 6.1E-19 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_08600 918350b61f261093556595eec4d44c35 1113 SMART SM00926 98 163 3.1E-8 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_08600 918350b61f261093556595eec4d44c35 1113 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 101 162 5.2E-10 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_02250 d3a161bedc04434d490cc46e70d0314b 248 Pfam PF00535 Glycosyl transferase family 2 6 95 1.6E-15 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 YH65_02250 d3a161bedc04434d490cc46e70d0314b 248 SUPERFAMILY SSF53448 3 140 1.47E-21 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YH65_02250 d3a161bedc04434d490cc46e70d0314b 248 Gene3D G3DSA:3.90.550.10 1 233 4.6E-20 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YH65_02400 8656558af56d8f779b585184082ab430 470 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 110 119 - T 11-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YH65_02400 8656558af56d8f779b585184082ab430 470 Gene3D G3DSA:3.40.120.10 186 258 4.0E-25 T 11-10-2018 YH65_02400 8656558af56d8f779b585184082ab430 470 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 380 463 5.3E-12 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YH65_02400 8656558af56d8f779b585184082ab430 470 Gene3D G3DSA:3.40.120.10 1 159 2.4E-38 T 11-10-2018 YH65_02400 8656558af56d8f779b585184082ab430 470 Gene3D G3DSA:3.30.310.50 376 470 6.4E-24 T 11-10-2018 YH65_02400 8656558af56d8f779b585184082ab430 470 SUPERFAMILY SSF53738 271 363 3.14E-23 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YH65_02400 8656558af56d8f779b585184082ab430 470 SUPERFAMILY SSF55957 374 466 2.44E-19 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YH65_02400 8656558af56d8f779b585184082ab430 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 109 123 9.5E-21 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YH65_02400 8656558af56d8f779b585184082ab430 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 218 231 9.5E-21 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YH65_02400 8656558af56d8f779b585184082ab430 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 184 203 9.5E-21 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YH65_02400 8656558af56d8f779b585184082ab430 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 246 261 9.5E-21 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YH65_02400 8656558af56d8f779b585184082ab430 470 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 270 374 3.3E-20 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YH65_02400 8656558af56d8f779b585184082ab430 470 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 7 131 8.6E-24 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YH65_02400 8656558af56d8f779b585184082ab430 470 SUPERFAMILY SSF53738 5 191 9.42E-29 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YH65_02400 8656558af56d8f779b585184082ab430 470 Gene3D G3DSA:3.40.120.10 259 375 1.6E-27 T 11-10-2018 YH65_02400 8656558af56d8f779b585184082ab430 470 SUPERFAMILY SSF53738 167 267 7.06E-24 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YH65_02400 8656558af56d8f779b585184082ab430 470 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 168 264 1.1E-19 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YH65_10640 36c382ea17634f96cbb9aa144e7f72e2 118 SUPERFAMILY SSF53137 9 116 7.41E-40 T 11-10-2018 YH65_10640 36c382ea17634f96cbb9aa144e7f72e2 118 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 8 118 25.081 T 11-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 YH65_10640 36c382ea17634f96cbb9aa144e7f72e2 118 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 9 118 1.0E-38 T 11-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 YH65_10640 36c382ea17634f96cbb9aa144e7f72e2 118 Gene3D G3DSA:3.30.420.100 7 118 8.1E-32 T 11-10-2018 YH65_10640 36c382ea17634f96cbb9aa144e7f72e2 118 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 8 118 2.1E-39 T 11-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_01340 3a8c3a75c8544cc83edd7ba234f98006 469 PIRSF PIRSF017184 4 467 6.1E-97 T 11-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 YH65_01340 3a8c3a75c8544cc83edd7ba234f98006 469 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 409 419 - T 11-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site YH65_01340 3a8c3a75c8544cc83edd7ba234f98006 469 Pfam PF01256 Carbohydrate kinase 235 463 9.1E-39 T 11-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 YH65_01340 3a8c3a75c8544cc83edd7ba234f98006 469 SUPERFAMILY SSF64153 9 202 1.05E-47 T 11-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 YH65_01340 3a8c3a75c8544cc83edd7ba234f98006 469 Gene3D G3DSA:3.40.50.10260 3 204 7.8E-50 T 11-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 YH65_01340 3a8c3a75c8544cc83edd7ba234f98006 469 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 210 468 14.652 T 11-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 YH65_01340 3a8c3a75c8544cc83edd7ba234f98006 469 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 10 196 3.2E-36 T 11-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 YH65_01340 3a8c3a75c8544cc83edd7ba234f98006 469 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 4 197 19.495 T 11-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 YH65_01340 3a8c3a75c8544cc83edd7ba234f98006 469 Gene3D G3DSA:3.40.1190.20 206 467 8.2E-65 T 11-10-2018 IPR029056 Ribokinase-like YH65_01340 3a8c3a75c8544cc83edd7ba234f98006 469 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 208 464 2.3E-46 T 11-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 YH65_01340 3a8c3a75c8544cc83edd7ba234f98006 469 SUPERFAMILY SSF53613 208 465 1.62E-44 T 11-10-2018 IPR029056 Ribokinase-like YH65_01340 3a8c3a75c8544cc83edd7ba234f98006 469 Pfam PF03853 YjeF-related protein N-terminus 24 175 1.2E-30 T 11-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 YH65_01640 dcfc4dca05235a1859590a3c66d32c5e 87 SUPERFAMILY SSF46689 1 68 5.38E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 YH65_01640 dcfc4dca05235a1859590a3c66d32c5e 87 Pfam PF01527 Transposase 2 70 5.3E-17 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 YH65_01640 dcfc4dca05235a1859590a3c66d32c5e 87 Gene3D G3DSA:1.10.10.60 1 46 3.6E-5 T 11-10-2018 YH65_04735 dcfc4dca05235a1859590a3c66d32c5e 87 SUPERFAMILY SSF46689 1 68 5.38E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 YH65_04735 dcfc4dca05235a1859590a3c66d32c5e 87 Pfam PF01527 Transposase 2 70 5.3E-17 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 YH65_04735 dcfc4dca05235a1859590a3c66d32c5e 87 Gene3D G3DSA:1.10.10.60 1 46 3.6E-5 T 11-10-2018 YH65_02985 4227825a79c22ac120189d3606e7dc2e 611 Pfam PF00005 ABC transporter 18 148 4.8E-24 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YH65_02985 4227825a79c22ac120189d3606e7dc2e 611 SUPERFAMILY SSF52540 265 485 3.4E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_02985 4227825a79c22ac120189d3606e7dc2e 611 Pfam PF12848 ABC transporter 190 268 1.5E-14 T 11-10-2018 IPR032781 ABC-transporter extension domain YH65_02985 4227825a79c22ac120189d3606e7dc2e 611 Pfam PF00005 ABC transporter 300 430 3.5E-22 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YH65_02985 4227825a79c22ac120189d3606e7dc2e 611 ProSitePatterns PS00211 ABC transporters family signature. 402 416 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YH65_02985 4227825a79c22ac120189d3606e7dc2e 611 SMART SM00382 308 475 3.8E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain YH65_02985 4227825a79c22ac120189d3606e7dc2e 611 SMART SM00382 26 193 3.7E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain YH65_02985 4227825a79c22ac120189d3606e7dc2e 611 SUPERFAMILY SSF52540 2 207 1.0E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_02985 4227825a79c22ac120189d3606e7dc2e 611 Gene3D G3DSA:3.40.50.300 246 516 1.5E-51 T 11-10-2018 YH65_02985 4227825a79c22ac120189d3606e7dc2e 611 Gene3D G3DSA:3.40.50.300 1 231 1.4E-51 T 11-10-2018 YH65_06990 5ec3458553bf6261965a5ce34efcbdfb 235 PIRSF PIRSF028451 2 226 1.3E-34 T 11-10-2018 IPR015996 Uncharacterised conserved protein UCP028451 YH65_06990 5ec3458553bf6261965a5ce34efcbdfb 235 Pfam PF09365 Conserved hypothetical protein (DUF2461) 11 219 1.4E-40 T 11-10-2018 IPR012808 Conserved hypothetical protein CHP02453 YH65_06990 5ec3458553bf6261965a5ce34efcbdfb 235 TIGRFAM TIGR02453 TIGR02453: TIGR02453 family protein 8 221 2.8E-38 T 11-10-2018 IPR012808 Conserved hypothetical protein CHP02453 YH65_03220 ad2d634227715bb75d7fdc4572ce3ee4 295 Gene3D G3DSA:1.10.287.80 6 290 1.3E-89 T 11-10-2018 YH65_03220 ad2d634227715bb75d7fdc4572ce3ee4 295 SUPERFAMILY SSF52943 2 293 1.03E-82 T 11-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YH65_03220 ad2d634227715bb75d7fdc4572ce3ee4 295 Gene3D G3DSA:3.40.1380.10 61 212 1.3E-89 T 11-10-2018 YH65_03220 ad2d634227715bb75d7fdc4572ce3ee4 295 PRINTS PR00126 ATP synthase gamma subunit signature 272 293 1.2E-31 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YH65_03220 ad2d634227715bb75d7fdc4572ce3ee4 295 PRINTS PR00126 ATP synthase gamma subunit signature 241 260 1.2E-31 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YH65_03220 ad2d634227715bb75d7fdc4572ce3ee4 295 PRINTS PR00126 ATP synthase gamma subunit signature 79 98 1.2E-31 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YH65_03220 ad2d634227715bb75d7fdc4572ce3ee4 295 PRINTS PR00126 ATP synthase gamma subunit signature 172 189 1.2E-31 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YH65_03220 ad2d634227715bb75d7fdc4572ce3ee4 295 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 293 1.2E-95 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YH65_03220 ad2d634227715bb75d7fdc4572ce3ee4 295 Pfam PF00231 ATP synthase 3 293 1.5E-86 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YH65_03220 ad2d634227715bb75d7fdc4572ce3ee4 295 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 294 32.627 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YH65_05235 b3bbe806bcedb2f31d7464ac97e08325 571 Pfam PF14716 Helix-hairpin-helix domain 5 75 8.3E-24 T 11-10-2018 IPR010996 DNA polymerase beta-like, N-terminal domain YH65_05235 b3bbe806bcedb2f31d7464ac97e08325 571 Gene3D G3DSA:3.20.20.140 329 571 9.7E-73 T 11-10-2018 YH65_05235 b3bbe806bcedb2f31d7464ac97e08325 571 Gene3D G3DSA:1.10.150.110 1 88 1.5E-28 T 11-10-2018 IPR027421 DNA polymerase lambda lyase domain superfamily YH65_05235 b3bbe806bcedb2f31d7464ac97e08325 571 Pfam PF14520 Helix-hairpin-helix domain 95 146 4.1E-8 T 11-10-2018 YH65_05235 b3bbe806bcedb2f31d7464ac97e08325 571 PRINTS PR00870 DNA-polymerase family X pol beta-like signature 298 315 3.7E-8 T 11-10-2018 IPR002008 DNA polymerase family X, beta-like GO:0003677|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YH65_05235 b3bbe806bcedb2f31d7464ac97e08325 571 PRINTS PR00870 DNA-polymerase family X pol beta-like signature 61 78 3.7E-8 T 11-10-2018 IPR002008 DNA polymerase family X, beta-like GO:0003677|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YH65_05235 b3bbe806bcedb2f31d7464ac97e08325 571 PRINTS PR00870 DNA-polymerase family X pol beta-like signature 256 263 3.7E-8 T 11-10-2018 IPR002008 DNA polymerase family X, beta-like GO:0003677|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YH65_05235 b3bbe806bcedb2f31d7464ac97e08325 571 PRINTS PR00870 DNA-polymerase family X pol beta-like signature 241 249 3.7E-8 T 11-10-2018 IPR002008 DNA polymerase family X, beta-like GO:0003677|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YH65_05235 b3bbe806bcedb2f31d7464ac97e08325 571 PIRSF PIRSF005047 3 571 8.8E-228 T 11-10-2018 IPR022311 Uncharacterised conserved protein UCP005047, YshC KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YH65_05235 b3bbe806bcedb2f31d7464ac97e08325 571 Pfam PF14792 DNA polymerase beta palm 166 210 3.6E-6 T 11-10-2018 IPR028207 DNA polymerase beta, palm domain YH65_05235 b3bbe806bcedb2f31d7464ac97e08325 571 SUPERFAMILY SSF158702 61 148 1.31E-6 T 11-10-2018 YH65_05235 b3bbe806bcedb2f31d7464ac97e08325 571 Gene3D G3DSA:3.30.210.10 263 326 1.8E-21 T 11-10-2018 IPR037160 DNA polymerase, thumb domain superfamily YH65_05235 b3bbe806bcedb2f31d7464ac97e08325 571 Pfam PF02811 PHP domain 341 440 1.3E-8 T 11-10-2018 IPR004013 PHP domain GO:0003824 YH65_05235 b3bbe806bcedb2f31d7464ac97e08325 571 SMART SM00278 54 73 6.1 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 YH65_05235 b3bbe806bcedb2f31d7464ac97e08325 571 SMART SM00278 94 113 49.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 YH65_05235 b3bbe806bcedb2f31d7464ac97e08325 571 SMART SM00278 129 148 310.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 YH65_05235 b3bbe806bcedb2f31d7464ac97e08325 571 SUPERFAMILY SSF47802 4 87 2.09E-21 T 11-10-2018 IPR027421 DNA polymerase lambda lyase domain superfamily YH65_05235 b3bbe806bcedb2f31d7464ac97e08325 571 Gene3D G3DSA:3.30.460.10 158 262 2.3E-30 T 11-10-2018 YH65_05235 b3bbe806bcedb2f31d7464ac97e08325 571 SMART SM00481 340 419 9.1E-18 T 11-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal YH65_05235 b3bbe806bcedb2f31d7464ac97e08325 571 Pfam PF14791 DNA polymerase beta thumb 256 316 1.8E-19 T 11-10-2018 IPR029398 DNA polymerase beta, thumb domain YH65_05235 b3bbe806bcedb2f31d7464ac97e08325 571 SUPERFAMILY SSF81301 158 316 3.21E-44 T 11-10-2018 YH65_05235 b3bbe806bcedb2f31d7464ac97e08325 571 Gene3D G3DSA:1.10.150.20 89 154 6.1E-19 T 11-10-2018 YH65_05235 b3bbe806bcedb2f31d7464ac97e08325 571 SMART SM00483 2 316 4.9E-25 T 11-10-2018 IPR002054 DNA-directed DNA polymerase X GO:0003677|GO:0003887 YH65_05235 b3bbe806bcedb2f31d7464ac97e08325 571 SUPERFAMILY SSF89550 338 566 1.44E-50 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 YH65_05165 922bf73f61d3542adcfd1004098456d4 83 Gene3D G3DSA:3.40.1440.10 1 83 1.1E-33 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 YH65_05165 922bf73f61d3542adcfd1004098456d4 83 SMART SM00465 1 80 2.0E-5 T 11-10-2018 IPR000305 GIY-YIG endonuclease YH65_05165 922bf73f61d3542adcfd1004098456d4 83 SUPERFAMILY SSF82771 2 72 4.32E-14 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 YH65_05165 922bf73f61d3542adcfd1004098456d4 83 Pfam PF01541 GIY-YIG catalytic domain 2 72 4.0E-17 T 11-10-2018 IPR000305 GIY-YIG endonuclease YH65_04935 f13f6497d54a5d7e4ce606209340b02e 141 Pfam PF00293 NUDIX domain 12 128 1.6E-15 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 YH65_04935 f13f6497d54a5d7e4ce606209340b02e 141 Gene3D G3DSA:3.90.79.10 1 137 1.2E-37 T 11-10-2018 YH65_04935 f13f6497d54a5d7e4ce606209340b02e 141 PRINTS PR00502 NUDIX hydrolase family signature 52 67 5.8E-5 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 YH65_04935 f13f6497d54a5d7e4ce606209340b02e 141 PRINTS PR00502 NUDIX hydrolase family signature 38 52 5.8E-5 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 YH65_04935 f13f6497d54a5d7e4ce606209340b02e 141 SUPERFAMILY SSF55811 4 136 1.62E-24 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 YH65_00895 1282f822f43e4f07f592fca2e4c3fd4d 657 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 4 655 1.4E-299 T 11-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 YH65_00895 1282f822f43e4f07f592fca2e4c3fd4d 657 SUPERFAMILY SSF46600 611 656 5.36E-12 T 11-10-2018 IPR036876 UVR domain superfamily YH65_00895 1282f822f43e4f07f592fca2e4c3fd4d 657 SUPERFAMILY SSF52540 32 591 1.52E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_00895 1282f822f43e4f07f592fca2e4c3fd4d 657 Gene3D G3DSA:3.40.50.300 416 590 3.4E-47 T 11-10-2018 YH65_00895 1282f822f43e4f07f592fca2e4c3fd4d 657 SUPERFAMILY SSF52540 3 416 1.41E-128 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_00895 1282f822f43e4f07f592fca2e4c3fd4d 657 SMART SM00490 461 547 6.4E-19 T 11-10-2018 IPR001650 Helicase, C-terminal YH65_00895 1282f822f43e4f07f592fca2e4c3fd4d 657 Gene3D G3DSA:3.40.50.300 1 249 1.3E-71 T 11-10-2018 YH65_00895 1282f822f43e4f07f592fca2e4c3fd4d 657 Pfam PF02151 UvrB/uvrC motif 623 656 2.1E-9 T 11-10-2018 IPR001943 UVR domain GO:0005515 YH65_00895 1282f822f43e4f07f592fca2e4c3fd4d 657 Pfam PF04851 Type III restriction enzyme, res subunit 15 118 2.8E-10 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 YH65_00895 1282f822f43e4f07f592fca2e4c3fd4d 657 Gene3D G3DSA:4.10.860.10 605 657 3.9E-10 T 11-10-2018 YH65_00895 1282f822f43e4f07f592fca2e4c3fd4d 657 Gene3D G3DSA:3.40.50.300 260 415 1.6E-46 T 11-10-2018 YH65_00895 1282f822f43e4f07f592fca2e4c3fd4d 657 Hamap MF_00204 UvrABC system protein B [uvrB]. 2 657 41.339 T 11-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 YH65_00895 1282f822f43e4f07f592fca2e4c3fd4d 657 Pfam PF12344 Ultra-violet resistance protein B 553 594 2.4E-18 T 11-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain YH65_00895 1282f822f43e4f07f592fca2e4c3fd4d 657 SMART SM00487 8 427 1.5E-24 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain YH65_00895 1282f822f43e4f07f592fca2e4c3fd4d 657 Pfam PF00271 Helicase conserved C-terminal domain 445 546 1.5E-17 T 11-10-2018 IPR001650 Helicase, C-terminal YH65_10575 e8033fb927597dc3c33e412b0fe9cb0d 275 Gene3D G3DSA:2.40.50.140 1 114 7.7E-40 T 11-10-2018 YH65_10575 e8033fb927597dc3c33e412b0fe9cb0d 275 Gene3D G3DSA:4.10.950.10 198 275 5.4E-35 T 11-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_10575 e8033fb927597dc3c33e412b0fe9cb0d 275 PIRSF PIRSF002158 5 275 4.1E-93 T 11-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YH65_10575 e8033fb927597dc3c33e412b0fe9cb0d 275 SUPERFAMILY SSF50249 2 119 4.11E-41 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold YH65_10575 e8033fb927597dc3c33e412b0fe9cb0d 275 SMART SM01383 42 118 2.6E-41 T 11-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YH65_10575 e8033fb927597dc3c33e412b0fe9cb0d 275 ProSitePatterns PS00467 Ribosomal protein L2 signature. 219 230 - T 11-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_10575 e8033fb927597dc3c33e412b0fe9cb0d 275 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 275 1.7E-129 T 11-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 YH65_10575 e8033fb927597dc3c33e412b0fe9cb0d 275 SUPERFAMILY SSF50104 128 273 4.87E-60 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily YH65_10575 e8033fb927597dc3c33e412b0fe9cb0d 275 Gene3D G3DSA:2.30.30.30 120 197 2.9E-30 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 YH65_10575 e8033fb927597dc3c33e412b0fe9cb0d 275 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 274 44.968 T 11-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 YH65_10575 e8033fb927597dc3c33e412b0fe9cb0d 275 SMART SM01382 125 253 3.4E-89 T 11-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 YH65_10575 e8033fb927597dc3c33e412b0fe9cb0d 275 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 126 251 3.0E-55 T 11-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 YH65_10575 e8033fb927597dc3c33e412b0fe9cb0d 275 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 118 2.7E-29 T 11-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 YH65_03880 c85a8c058ef02e9cc05922a6394e80ba 223 Gene3D G3DSA:1.10.10.10 130 222 1.1E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YH65_03880 c85a8c058ef02e9cc05922a6394e80ba 223 Gene3D G3DSA:3.40.50.2300 2 129 3.7E-32 T 11-10-2018 YH65_03880 c85a8c058ef02e9cc05922a6394e80ba 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 219 3.9E-18 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YH65_03880 c85a8c058ef02e9cc05922a6394e80ba 223 SUPERFAMILY SSF46894 133 221 3.97E-19 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YH65_03880 c85a8c058ef02e9cc05922a6394e80ba 223 SMART SM00862 148 219 5.9E-19 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YH65_03880 c85a8c058ef02e9cc05922a6394e80ba 223 SUPERFAMILY SSF52172 3 146 1.08E-34 T 11-10-2018 IPR011006 CheY-like superfamily YH65_03880 c85a8c058ef02e9cc05922a6394e80ba 223 Pfam PF00072 Response regulator receiver domain 4 113 3.4E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YH65_03880 c85a8c058ef02e9cc05922a6394e80ba 223 SMART SM00448 2 113 2.2E-33 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YH65_10385 9db045a0b82283b7a26d4fe01a97a5a2 455 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 49 150 1.1E-6 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YH65_10385 9db045a0b82283b7a26d4fe01a97a5a2 455 SUPERFAMILY SSF51905 168 294 2.15E-27 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_10385 9db045a0b82283b7a26d4fe01a97a5a2 455 Gene3D G3DSA:3.50.50.60 49 358 5.8E-77 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_10385 9db045a0b82283b7a26d4fe01a97a5a2 455 SUPERFAMILY SSF51905 47 155 1.53E-16 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_10385 9db045a0b82283b7a26d4fe01a97a5a2 455 Gene3D G3DSA:3.50.50.60 165 295 5.8E-77 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_10320 4f85791f7b7c3267c33336480153fc17 157 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 1 157 33.682 T 11-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 YH65_10320 4f85791f7b7c3267c33336480153fc17 157 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 3 151 4.9E-52 T 11-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 YH65_10320 4f85791f7b7c3267c33336480153fc17 157 Pfam PF01967 MoaC family 14 149 6.3E-51 T 11-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 YH65_10320 4f85791f7b7c3267c33336480153fc17 157 SUPERFAMILY SSF55040 11 154 8.89E-56 T 11-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 YH65_10320 4f85791f7b7c3267c33336480153fc17 157 Gene3D G3DSA:3.30.70.640 1 157 3.9E-61 T 11-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 YH65_03520 e670127dd04e2f9e702e888c2f3d4a94 310 Hamap MF_02086 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 1 307 49.085 T 11-10-2018 IPR037539 4-hydroxythreonine-4-phosphate dehydrogenase, epsilonproteobacteria KEGG: 00750+1.1.1.262 YH65_03520 e670127dd04e2f9e702e888c2f3d4a94 310 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 30 305 1.9E-93 T 11-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 YH65_03520 e670127dd04e2f9e702e888c2f3d4a94 310 SUPERFAMILY SSF53659 2 308 2.88E-74 T 11-10-2018 YH65_03520 e670127dd04e2f9e702e888c2f3d4a94 310 Gene3D G3DSA:3.40.718.10 1 310 2.2E-104 T 11-10-2018 YH65_02265 bb0b2d3016b3927397537f909a6b156b 188 Pfam PF13580 SIS domain 10 144 1.9E-30 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 YH65_02265 bb0b2d3016b3927397537f909a6b156b 188 Gene3D G3DSA:3.40.50.10490 1 187 4.5E-78 T 11-10-2018 YH65_02265 bb0b2d3016b3927397537f909a6b156b 188 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 187 38.729 T 11-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 YH65_02265 bb0b2d3016b3927397537f909a6b156b 188 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 33 183 6.2E-69 T 11-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 YH65_02265 bb0b2d3016b3927397537f909a6b156b 188 SUPERFAMILY SSF53697 1 186 7.89E-57 T 11-10-2018 YH65_02980 7b2126cf12fcc6936862a973d4c96876 1169 Gene3D G3DSA:3.20.20.20 332 623 6.0E-94 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 YH65_02980 7b2126cf12fcc6936862a973d4c96876 1169 Pfam PF02574 Homocysteine S-methyltransferase 16 311 6.6E-58 T 11-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 YH65_02980 7b2126cf12fcc6936862a973d4c96876 1169 SUPERFAMILY SSF47644 629 714 3.01E-22 T 11-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 YH65_02980 7b2126cf12fcc6936862a973d4c96876 1169 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 908 1169 1.3E-33 T 11-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 YH65_02980 7b2126cf12fcc6936862a973d4c96876 1169 Gene3D G3DSA:1.10.1240.10 626 712 7.6E-25 T 11-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 YH65_02980 7b2126cf12fcc6936862a973d4c96876 1169 SUPERFAMILY SSF51717 343 606 4.06E-73 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 YH65_02980 7b2126cf12fcc6936862a973d4c96876 1169 SMART SM01018 633 715 3.8E-36 T 11-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 YH65_02980 7b2126cf12fcc6936862a973d4c96876 1169 SUPERFAMILY SSF56507 874 1169 3.66E-75 T 11-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 YH65_02980 7b2126cf12fcc6936862a973d4c96876 1169 Gene3D G3DSA:1.10.288.10 904 1070 1.3E-45 T 11-10-2018 YH65_02980 7b2126cf12fcc6936862a973d4c96876 1169 Gene3D G3DSA:3.10.196.10 888 1169 1.3E-45 T 11-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 YH65_02980 7b2126cf12fcc6936862a973d4c96876 1169 Pfam PF02607 B12 binding domain 636 707 1.6E-21 T 11-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 YH65_02980 7b2126cf12fcc6936862a973d4c96876 1169 Pfam PF02310 B12 binding domain 722 810 5.6E-15 T 11-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 YH65_02980 7b2126cf12fcc6936862a973d4c96876 1169 SUPERFAMILY SSF82282 6 385 2.35E-95 T 11-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 YH65_02980 7b2126cf12fcc6936862a973d4c96876 1169 Gene3D G3DSA:3.20.20.330 2 321 8.0E-88 T 11-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 YH65_02980 7b2126cf12fcc6936862a973d4c96876 1169 TIGRFAM TIGR02082 metH: methionine synthase 11 1169 0.0 T 11-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 YH65_02980 7b2126cf12fcc6936862a973d4c96876 1169 SUPERFAMILY SSF52242 717 845 6.28E-35 T 11-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 YH65_02980 7b2126cf12fcc6936862a973d4c96876 1169 Gene3D G3DSA:3.40.50.280 717 865 4.0E-36 T 11-10-2018 YH65_02980 7b2126cf12fcc6936862a973d4c96876 1169 PIRSF PIRSF000381 1 1169 0.0 T 11-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 YH65_02980 7b2126cf12fcc6936862a973d4c96876 1169 Pfam PF00809 Pterin binding enzyme 346 579 6.3E-37 T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 YH65_00595 ee722a74402a67af39260c7c202c7efb 398 SUPERFAMILY SSF53748 3 398 5.54E-141 T 11-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YH65_00595 ee722a74402a67af39260c7c202c7efb 398 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 14 24 - T 11-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YH65_00595 ee722a74402a67af39260c7c202c7efb 398 Gene3D G3DSA:3.40.50.1260 6 396 3.6E-149 T 11-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YH65_00595 ee722a74402a67af39260c7c202c7efb 398 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 4 398 38.106 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YH65_00595 ee722a74402a67af39260c7c202c7efb 398 PIRSF PIRSF000724 1 398 1.5E-140 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YH65_00595 ee722a74402a67af39260c7c202c7efb 398 Gene3D G3DSA:3.40.50.1260 175 388 3.6E-149 T 11-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YH65_00595 ee722a74402a67af39260c7c202c7efb 398 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 9.1E-83 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YH65_00595 ee722a74402a67af39260c7c202c7efb 398 PRINTS PR00477 Phosphoglycerate kinase family signature 9 25 9.1E-83 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YH65_00595 ee722a74402a67af39260c7c202c7efb 398 PRINTS PR00477 Phosphoglycerate kinase family signature 318 343 9.1E-83 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YH65_00595 ee722a74402a67af39260c7c202c7efb 398 PRINTS PR00477 Phosphoglycerate kinase family signature 173 195 9.1E-83 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YH65_00595 ee722a74402a67af39260c7c202c7efb 398 PRINTS PR00477 Phosphoglycerate kinase family signature 351 362 9.1E-83 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YH65_00595 ee722a74402a67af39260c7c202c7efb 398 PRINTS PR00477 Phosphoglycerate kinase family signature 112 127 9.1E-83 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YH65_00595 ee722a74402a67af39260c7c202c7efb 398 PRINTS PR00477 Phosphoglycerate kinase family signature 140 162 9.1E-83 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YH65_00595 ee722a74402a67af39260c7c202c7efb 398 PRINTS PR00477 Phosphoglycerate kinase family signature 196 215 9.1E-83 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YH65_00595 ee722a74402a67af39260c7c202c7efb 398 PRINTS PR00477 Phosphoglycerate kinase family signature 374 391 9.1E-83 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YH65_00595 ee722a74402a67af39260c7c202c7efb 398 Pfam PF00162 Phosphoglycerate kinase 5 387 5.8E-146 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YH65_09505 32b9a5c0881cf1b1e365e1fd827483e1 156 Pfam PF04463 Protein of unknown function (DUF523) 4 140 2.8E-27 T 11-10-2018 IPR007553 Domain of unknown function DUF523 YH65_04210 71e6bb9fdda65250f322af35ec01172a 584 SUPERFAMILY SSF55681 112 578 4.98E-105 T 11-10-2018 YH65_04210 71e6bb9fdda65250f322af35ec01172a 584 Pfam PF00152 tRNA synthetases class II (D, K and N) 120 552 8.9E-108 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 YH65_04210 71e6bb9fdda65250f322af35ec01172a 584 SUPERFAMILY SSF55261 290 419 5.4E-35 T 11-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 YH65_04210 71e6bb9fdda65250f322af35ec01172a 584 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 577 7.5E-238 T 11-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 YH65_04210 71e6bb9fdda65250f322af35ec01172a 584 SUPERFAMILY SSF50249 1 106 1.66E-29 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold YH65_04210 71e6bb9fdda65250f322af35ec01172a 584 Gene3D G3DSA:3.30.1360.30 273 419 1.4E-185 T 11-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 YH65_04210 71e6bb9fdda65250f322af35ec01172a 584 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 578 32.667 T 11-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 YH65_04210 71e6bb9fdda65250f322af35ec01172a 584 Gene3D G3DSA:2.40.50.140 1 106 5.3E-30 T 11-10-2018 YH65_04210 71e6bb9fdda65250f322af35ec01172a 584 Gene3D G3DSA:3.30.930.10 118 576 1.4E-185 T 11-10-2018 YH65_04210 71e6bb9fdda65250f322af35ec01172a 584 PRINTS PR01042 Aspartyl-tRNA synthetase signature 468 484 1.0E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 YH65_04210 71e6bb9fdda65250f322af35ec01172a 584 PRINTS PR01042 Aspartyl-tRNA synthetase signature 512 526 1.0E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 YH65_04210 71e6bb9fdda65250f322af35ec01172a 584 PRINTS PR01042 Aspartyl-tRNA synthetase signature 192 204 1.0E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 YH65_04210 71e6bb9fdda65250f322af35ec01172a 584 PRINTS PR01042 Aspartyl-tRNA synthetase signature 209 222 1.0E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 YH65_04210 71e6bb9fdda65250f322af35ec01172a 584 Pfam PF02938 GAD domain 317 405 9.0E-23 T 11-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 YH65_04210 71e6bb9fdda65250f322af35ec01172a 584 Pfam PF01336 OB-fold nucleic acid binding domain 18 102 1.0E-14 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 YH65_08485 f05443f88aaf343bcaa1456b11449a89 322 Gene3D G3DSA:3.40.190.10 16 292 9.9E-100 T 11-10-2018 YH65_08485 f05443f88aaf343bcaa1456b11449a89 322 SUPERFAMILY SSF53850 14 316 5.2E-62 T 11-10-2018 YH65_08485 f05443f88aaf343bcaa1456b11449a89 322 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 12 316 1.9E-102 T 11-10-2018 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter GO:0015888|GO:0030975 YH65_08485 f05443f88aaf343bcaa1456b11449a89 322 Pfam PF13343 Bacterial extracellular solute-binding protein 68 285 2.1E-18 T 11-10-2018 YH65_08485 f05443f88aaf343bcaa1456b11449a89 322 TIGRFAM TIGR01276 thiB: thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein 10 321 6.6E-109 T 11-10-2018 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria GO:0015888|GO:0030288|GO:0030975 YH65_08485 f05443f88aaf343bcaa1456b11449a89 322 Gene3D G3DSA:3.40.190.10 116 316 9.9E-100 T 11-10-2018 YH65_05655 0d00dfad86539365f14490c3a220e340 228 SUPERFAMILY SSF52821 108 223 1.96E-16 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily YH65_05655 0d00dfad86539365f14490c3a220e340 228 Gene3D G3DSA:3.40.250.10 92 227 3.8E-15 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily YH65_05655 0d00dfad86539365f14490c3a220e340 228 Pfam PF00581 Rhodanese-like domain 108 219 5.6E-11 T 11-10-2018 IPR001763 Rhodanese-like domain YH65_07520 9f664b20b0d273fc7a9d8849b0837866 243 Pfam PF00561 alpha/beta hydrolase fold 27 106 7.5E-11 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 YH65_07520 9f664b20b0d273fc7a9d8849b0837866 243 SUPERFAMILY SSF53474 13 236 7.56E-30 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold YH65_07520 9f664b20b0d273fc7a9d8849b0837866 243 Gene3D G3DSA:3.40.50.1820 13 236 8.1E-27 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold YH65_10270 3eaa157926b01d85c10f3629b2aaa6bd 258 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 4 258 3.6E-46 T 11-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 YH65_10270 3eaa157926b01d85c10f3629b2aaa6bd 258 Gene3D G3DSA:3.30.465.10 66 176 6.4E-15 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 YH65_10270 3eaa157926b01d85c10f3629b2aaa6bd 258 Gene3D G3DSA:3.90.78.10 177 258 5.2E-30 T 11-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 YH65_10270 3eaa157926b01d85c10f3629b2aaa6bd 258 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 172 257 4.1E-24 T 11-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 YH65_10270 3eaa157926b01d85c10f3629b2aaa6bd 258 SUPERFAMILY SSF56194 165 258 1.83E-29 T 11-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 YH65_10270 3eaa157926b01d85c10f3629b2aaa6bd 258 SUPERFAMILY SSF56176 36 172 3.5E-16 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 YH65_10270 3eaa157926b01d85c10f3629b2aaa6bd 258 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 258 47.182 T 11-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 YH65_01395 2fbe3e903ebc1bac0e20714c9d5c2459 660 ProSitePatterns PS00802 Transketolase signature 2. 459 475 - T 11-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 YH65_01395 2fbe3e903ebc1bac0e20714c9d5c2459 660 Gene3D G3DSA:3.40.50.920 529 657 4.1E-34 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 YH65_01395 2fbe3e903ebc1bac0e20714c9d5c2459 660 SUPERFAMILY SSF52518 7 320 4.02E-103 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold YH65_01395 2fbe3e903ebc1bac0e20714c9d5c2459 660 Gene3D G3DSA:3.40.50.970 331 522 9.5E-65 T 11-10-2018 YH65_01395 2fbe3e903ebc1bac0e20714c9d5c2459 660 Gene3D G3DSA:3.40.50.970 1 330 4.4E-111 T 11-10-2018 YH65_01395 2fbe3e903ebc1bac0e20714c9d5c2459 660 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 10 318 6.5E-126 T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 YH65_01395 2fbe3e903ebc1bac0e20714c9d5c2459 660 TIGRFAM TIGR00232 tktlase_bact: transketolase 11 648 3.7E-243 T 11-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 YH65_01395 2fbe3e903ebc1bac0e20714c9d5c2459 660 ProSitePatterns PS00801 Transketolase signature 1. 18 38 - T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 YH65_01395 2fbe3e903ebc1bac0e20714c9d5c2459 660 SMART SM00861 350 516 6.8E-57 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain YH65_01395 2fbe3e903ebc1bac0e20714c9d5c2459 660 SUPERFAMILY SSF52518 341 517 4.63E-57 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold YH65_01395 2fbe3e903ebc1bac0e20714c9d5c2459 660 Pfam PF02779 Transketolase, pyrimidine binding domain 349 515 6.9E-39 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain YH65_01395 2fbe3e903ebc1bac0e20714c9d5c2459 660 Pfam PF02780 Transketolase, C-terminal domain 532 640 1.2E-8 T 11-10-2018 IPR033248 Transketolase, C-terminal domain YH65_01395 2fbe3e903ebc1bac0e20714c9d5c2459 660 SUPERFAMILY SSF52922 528 649 2.09E-34 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 YH65_03450 7dcbd27166d6d0822414007f3b2312b2 164 Gene3D G3DSA:3.40.1280.10 1 162 1.7E-60 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YH65_03450 7dcbd27166d6d0822414007f3b2312b2 164 Pfam PF00588 SpoU rRNA Methylase family 2 142 8.0E-36 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 YH65_03450 7dcbd27166d6d0822414007f3b2312b2 164 PIRSF PIRSF029256 1 153 1.0E-57 T 11-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 YH65_03450 7dcbd27166d6d0822414007f3b2312b2 164 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 152 31.22 T 11-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 YH65_03450 7dcbd27166d6d0822414007f3b2312b2 164 SUPERFAMILY SSF75217 1 149 2.35E-39 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases YH65_07935 656eaff4e5f2ee68b816c34a69b23bb3 435 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 317 413 2.5E-23 T 11-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 YH65_07935 656eaff4e5f2ee68b816c34a69b23bb3 435 Gene3D G3DSA:3.30.460.30 3 159 3.1E-43 T 11-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 YH65_07935 656eaff4e5f2ee68b816c34a69b23bb3 435 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 157 4.9E-35 T 11-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 YH65_07935 656eaff4e5f2ee68b816c34a69b23bb3 435 Gene3D G3DSA:3.40.50.720 163 302 1.4E-28 T 11-10-2018 YH65_07935 656eaff4e5f2ee68b816c34a69b23bb3 435 SUPERFAMILY SSF69075 314 415 6.41E-18 T 11-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 YH65_07935 656eaff4e5f2ee68b816c34a69b23bb3 435 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 412 24.419 T 11-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 YH65_07935 656eaff4e5f2ee68b816c34a69b23bb3 435 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 100 123 - T 11-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 YH65_07935 656eaff4e5f2ee68b816c34a69b23bb3 435 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 414 3.4E-111 T 11-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 YH65_07935 656eaff4e5f2ee68b816c34a69b23bb3 435 SUPERFAMILY SSF69742 1 159 4.18E-37 T 11-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 YH65_07935 656eaff4e5f2ee68b816c34a69b23bb3 435 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 174 302 1.1E-27 T 11-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase YH65_07935 656eaff4e5f2ee68b816c34a69b23bb3 435 PIRSF PIRSF000445 1 429 2.6E-117 T 11-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 YH65_07935 656eaff4e5f2ee68b816c34a69b23bb3 435 SUPERFAMILY SSF51735 167 310 1.6E-21 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily YH65_01670 fe32ffae8a1e3d0bb2773b27aca0e7eb 253 Pfam PF13531 Bacterial extracellular solute-binding protein 21 247 8.7E-46 T 11-10-2018 YH65_01670 fe32ffae8a1e3d0bb2773b27aca0e7eb 253 PIRSF PIRSF004846 9 251 4.8E-60 T 11-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 YH65_01670 fe32ffae8a1e3d0bb2773b27aca0e7eb 253 SUPERFAMILY SSF53850 19 248 2.75E-53 T 11-10-2018 YH65_01670 fe32ffae8a1e3d0bb2773b27aca0e7eb 253 Gene3D G3DSA:3.40.190.10 25 247 3.3E-64 T 11-10-2018 YH65_01670 fe32ffae8a1e3d0bb2773b27aca0e7eb 253 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 26 246 4.0E-56 T 11-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 YH65_01670 fe32ffae8a1e3d0bb2773b27aca0e7eb 253 Gene3D G3DSA:3.40.190.10 100 209 3.3E-64 T 11-10-2018 YH65_00410 03086ba90672103208e14255c64d128a 462 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 399 416 - T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 YH65_00410 03086ba90672103208e14255c64d128a 462 SUPERFAMILY SSF55604 387 460 3.01E-17 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 YH65_00410 03086ba90672103208e14255c64d128a 462 Pfam PF00367 phosphotransferase system, EIIB 390 418 1.5E-10 T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 YH65_00410 03086ba90672103208e14255c64d128a 462 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 374 446 6.0E-14 T 11-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 YH65_00410 03086ba90672103208e14255c64d128a 462 Pfam PF02378 Phosphotransferase system, EIIC 9 304 4.5E-74 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 YH65_00410 03086ba90672103208e14255c64d128a 462 Gene3D G3DSA:3.30.1360.60 381 462 2.9E-24 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 YH65_02560 763276babe7829469ac0eb65025282ca 598 Pfam PF01541 GIY-YIG catalytic domain 13 94 4.9E-7 T 11-10-2018 IPR000305 GIY-YIG endonuclease YH65_02560 763276babe7829469ac0eb65025282ca 598 SUPERFAMILY SSF82771 11 101 1.57E-19 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 YH65_02560 763276babe7829469ac0eb65025282ca 598 SMART SM00465 11 99 9.7E-19 T 11-10-2018 IPR000305 GIY-YIG endonuclease YH65_02560 763276babe7829469ac0eb65025282ca 598 Gene3D G3DSA:3.40.1440.10 1 103 1.4E-30 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 YH65_02560 763276babe7829469ac0eb65025282ca 598 Pfam PF02151 UvrB/uvrC motif 203 234 1.1E-7 T 11-10-2018 IPR001943 UVR domain GO:0005515 YH65_02560 763276babe7829469ac0eb65025282ca 598 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 4 578 8.9E-162 T 11-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 YH65_02560 763276babe7829469ac0eb65025282ca 598 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 377 531 1.4E-42 T 11-10-2018 IPR001162 UvrC family homology region YH65_02560 763276babe7829469ac0eb65025282ca 598 Gene3D G3DSA:3.30.420.340 371 538 7.7E-43 T 11-10-2018 IPR038476 UvrC homology region 2 superfamily YH65_02560 763276babe7829469ac0eb65025282ca 598 SUPERFAMILY SSF47781 514 583 4.77E-11 T 11-10-2018 IPR010994 RuvA domain 2-like YH65_02560 763276babe7829469ac0eb65025282ca 598 Hamap MF_00203 UvrABC system protein C [uvrC]. 1 594 23.625 T 11-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 YH65_02560 763276babe7829469ac0eb65025282ca 598 SUPERFAMILY SSF46600 201 237 1.14E-6 T 11-10-2018 IPR036876 UVR domain superfamily YH65_02560 763276babe7829469ac0eb65025282ca 598 Gene3D G3DSA:1.10.150.20 539 593 4.0E-8 T 11-10-2018 YH65_07395 0af2288023177f037827e72df5ff4b0f 827 Gene3D G3DSA:1.20.120.1080 373 480 2.4E-12 T 11-10-2018 YH65_07395 0af2288023177f037827e72df5ff4b0f 827 Gene3D G3DSA:3.40.50.300 1 180 1.6E-54 T 11-10-2018 YH65_07395 0af2288023177f037827e72df5ff4b0f 827 SMART SM00847 391 514 5.7E-12 T 11-10-2018 IPR007502 Helicase-associated domain GO:0004386 YH65_07395 0af2288023177f037827e72df5ff4b0f 827 PIRSF PIRSF005496 1 827 1.7E-296 T 11-10-2018 YH65_07395 0af2288023177f037827e72df5ff4b0f 827 Pfam PF08482 ATP-dependent helicase C-terminal 682 814 3.5E-51 T 11-10-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal YH65_07395 0af2288023177f037827e72df5ff4b0f 827 Pfam PF04408 Helicase associated domain (HA2) 392 477 1.8E-12 T 11-10-2018 IPR007502 Helicase-associated domain GO:0004386 YH65_07395 0af2288023177f037827e72df5ff4b0f 827 SMART SM00487 2 187 3.6E-21 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain YH65_07395 0af2288023177f037827e72df5ff4b0f 827 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 4 826 5.7E-289 T 11-10-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 YH65_07395 0af2288023177f037827e72df5ff4b0f 827 SMART SM00490 231 333 1.4E-15 T 11-10-2018 IPR001650 Helicase, C-terminal YH65_07395 0af2288023177f037827e72df5ff4b0f 827 Pfam PF00271 Helicase conserved C-terminal domain 207 332 8.1E-16 T 11-10-2018 IPR001650 Helicase, C-terminal YH65_07395 0af2288023177f037827e72df5ff4b0f 827 SUPERFAMILY SSF52540 16 344 4.31E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_07395 0af2288023177f037827e72df5ff4b0f 827 Pfam PF00270 DEAD/DEAH box helicase 17 164 2.0E-10 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 YH65_07395 0af2288023177f037827e72df5ff4b0f 827 Gene3D G3DSA:3.40.50.300 181 350 3.8E-46 T 11-10-2018 YH65_02275 921f7500e82be6e8c0dde4828c514741 476 Pfam PF00294 pfkB family carbohydrate kinase 9 305 2.3E-42 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB YH65_02275 921f7500e82be6e8c0dde4828c514741 476 SUPERFAMILY SSF52374 344 470 5.35E-25 T 11-10-2018 YH65_02275 921f7500e82be6e8c0dde4828c514741 476 Hamap MF_01603 Bifunctional protein HldE [hldE]. 2 474 40.562 T 11-10-2018 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 YH65_02275 921f7500e82be6e8c0dde4828c514741 476 Gene3D G3DSA:3.40.50.620 319 475 3.8E-41 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YH65_02275 921f7500e82be6e8c0dde4828c514741 476 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 5 312 6.3E-112 T 11-10-2018 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 YH65_02275 921f7500e82be6e8c0dde4828c514741 476 Pfam PF01467 Cytidylyltransferase-like 349 439 2.5E-15 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 YH65_02275 921f7500e82be6e8c0dde4828c514741 476 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 335 472 6.3E-58 T 11-10-2018 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 YH65_02275 921f7500e82be6e8c0dde4828c514741 476 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 346 411 3.1E-16 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 YH65_02275 921f7500e82be6e8c0dde4828c514741 476 SUPERFAMILY SSF53613 10 315 4.68E-55 T 11-10-2018 IPR029056 Ribokinase-like YH65_02275 921f7500e82be6e8c0dde4828c514741 476 Gene3D G3DSA:3.40.1190.20 2 311 3.9E-101 T 11-10-2018 IPR029056 Ribokinase-like YH65_04485 ec013545ecd8d2165d7b5a37a7b8d8b1 406 Gene3D G3DSA:1.10.8.60 305 406 3.7E-39 T 11-10-2018 YH65_04485 ec013545ecd8d2165d7b5a37a7b8d8b1 406 SUPERFAMILY SSF52540 58 392 6.57E-75 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_04485 ec013545ecd8d2165d7b5a37a7b8d8b1 406 SMART SM01086 306 400 1.1E-33 T 11-10-2018 IPR019489 Clp ATPase, C-terminal YH65_04485 ec013545ecd8d2165d7b5a37a7b8d8b1 406 Gene3D G3DSA:3.40.50.300 50 304 5.6E-105 T 11-10-2018 YH65_04485 ec013545ecd8d2165d7b5a37a7b8d8b1 406 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 403 47.866 T 11-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 YH65_04485 ec013545ecd8d2165d7b5a37a7b8d8b1 406 Gene3D G3DSA:3.30.50.30 1 42 7.0E-9 T 11-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily YH65_04485 ec013545ecd8d2165d7b5a37a7b8d8b1 406 SMART SM00382 104 322 2.8E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain YH65_04485 ec013545ecd8d2165d7b5a37a7b8d8b1 406 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 3 398 1.9E-181 T 11-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 YH65_04485 ec013545ecd8d2165d7b5a37a7b8d8b1 406 Pfam PF06689 ClpX C4-type zinc finger 4 39 1.6E-12 T 11-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 YH65_04485 ec013545ecd8d2165d7b5a37a7b8d8b1 406 Pfam PF07724 AAA domain (Cdc48 subfamily) 105 299 4.1E-47 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 YH65_04485 ec013545ecd8d2165d7b5a37a7b8d8b1 406 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 307 391 2.2E-17 T 11-10-2018 IPR019489 Clp ATPase, C-terminal YH65_04485 ec013545ecd8d2165d7b5a37a7b8d8b1 406 SMART SM00994 3 42 1.8E-14 T 11-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 YH65_04485 ec013545ecd8d2165d7b5a37a7b8d8b1 406 SUPERFAMILY SSF57716 5 39 2.0E-7 T 11-10-2018 YH65_08970 51c11d95d6f230eb92228a8d47466e6f 213 Gene3D G3DSA:3.90.1720.10 39 182 5.7E-37 T 11-10-2018 YH65_08970 51c11d95d6f230eb92228a8d47466e6f 213 Pfam PF00877 NlpC/P60 family 58 155 8.1E-22 T 11-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain YH65_08970 51c11d95d6f230eb92228a8d47466e6f 213 SUPERFAMILY SSF54001 42 169 8.83E-36 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily YH65_02825 46d3e06e4eb100210a158715819da166 258 Pfam PF13899 Thioredoxin-like 149 204 7.2E-7 T 11-10-2018 YH65_02825 46d3e06e4eb100210a158715819da166 258 Gene3D G3DSA:1.10.760.10 1 138 6.2E-10 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_02825 46d3e06e4eb100210a158715819da166 258 SUPERFAMILY SSF46626 17 136 8.79E-14 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_02825 46d3e06e4eb100210a158715819da166 258 SUPERFAMILY SSF52833 146 255 7.21E-23 T 11-10-2018 IPR036249 Thioredoxin-like superfamily YH65_02825 46d3e06e4eb100210a158715819da166 258 Gene3D G3DSA:3.40.30.10 139 258 4.1E-15 T 11-10-2018 YH65_02825 46d3e06e4eb100210a158715819da166 258 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 19 132 3.1E-5 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YH65_00495 0e2e1b5c0996b3b9bd5628c14d8c3743 100 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 7 95 3.0E-24 T 11-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like YH65_00495 0e2e1b5c0996b3b9bd5628c14d8c3743 100 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 2 100 20.052 T 11-10-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 YH65_04390 3111bb6ba01f5a0c0d7ca718142c4de7 74 Gene3D G3DSA:3.90.1570.30 1 52 1.6E-8 T 11-10-2018 YH65_00890 49a207b19915be6f5d61b102def948a0 695 Gene3D G3DSA:3.30.870.10 495 678 1.8E-60 T 11-10-2018 YH65_00890 49a207b19915be6f5d61b102def948a0 695 Gene3D G3DSA:3.30.1840.10 5 305 6.3E-96 T 11-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 YH65_00890 49a207b19915be6f5d61b102def948a0 695 SUPERFAMILY SSF56024 314 489 4.66E-53 T 11-10-2018 YH65_00890 49a207b19915be6f5d61b102def948a0 695 SUPERFAMILY SSF56024 496 672 7.18E-62 T 11-10-2018 YH65_00890 49a207b19915be6f5d61b102def948a0 695 SUPERFAMILY SSF143724 113 307 8.83E-56 T 11-10-2018 YH65_00890 49a207b19915be6f5d61b102def948a0 695 Pfam PF02503 Polyphosphate kinase middle domain 125 316 3.3E-58 T 11-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 YH65_00890 49a207b19915be6f5d61b102def948a0 695 SUPERFAMILY SSF140356 8 109 1.83E-35 T 11-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 YH65_00890 49a207b19915be6f5d61b102def948a0 695 Pfam PF13089 Polyphosphate kinase N-terminal domain 11 115 1.2E-34 T 11-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 YH65_00890 49a207b19915be6f5d61b102def948a0 695 Pfam PF13090 Polyphosphate kinase C-terminal domain 325 653 1.8E-145 T 11-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 YH65_00890 49a207b19915be6f5d61b102def948a0 695 Hamap MF_00347 Polyphosphate kinase [ppk]. 8 671 27.246 T 11-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 YH65_00890 49a207b19915be6f5d61b102def948a0 695 Gene3D G3DSA:3.30.870.10 318 494 1.6E-70 T 11-10-2018 YH65_00890 49a207b19915be6f5d61b102def948a0 695 PIRSF PIRSF015589 1 684 7.3E-261 T 11-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 YH65_00890 49a207b19915be6f5d61b102def948a0 695 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 11 662 6.4E-246 T 11-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 YH65_05375 b09fbb175ee2d85a0cfa242d263c948d 455 SUPERFAMILY SSF50156 98 197 1.06E-23 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 YH65_05375 b09fbb175ee2d85a0cfa242d263c948d 455 Pfam PF03572 Peptidase family S41 205 365 1.9E-53 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 YH65_05375 b09fbb175ee2d85a0cfa242d263c948d 455 Pfam PF13180 PDZ domain 104 183 4.3E-13 T 11-10-2018 IPR001478 PDZ domain GO:0005515 YH65_05375 b09fbb175ee2d85a0cfa242d263c948d 455 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 60 371 4.4E-105 T 11-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 YH65_05375 b09fbb175ee2d85a0cfa242d263c948d 455 SMART SM00228 104 175 1.6E-14 T 11-10-2018 IPR001478 PDZ domain GO:0005515 YH65_05375 b09fbb175ee2d85a0cfa242d263c948d 455 Gene3D G3DSA:3.90.226.10 192 363 5.6E-88 T 11-10-2018 YH65_05375 b09fbb175ee2d85a0cfa242d263c948d 455 SMART SM00245 177 366 1.5E-71 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 YH65_05375 b09fbb175ee2d85a0cfa242d263c948d 455 Gene3D G3DSA:3.30.750.44 55 341 5.6E-88 T 11-10-2018 YH65_05375 b09fbb175ee2d85a0cfa242d263c948d 455 SUPERFAMILY SSF52096 49 370 3.81E-74 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily YH65_05375 b09fbb175ee2d85a0cfa242d263c948d 455 Gene3D G3DSA:2.30.42.10 104 191 5.6E-88 T 11-10-2018 YH65_01130 ffa4f39097810f89d3efc62b6991aaee 520 SUPERFAMILY SSF53067 3 252 3.6E-53 T 11-10-2018 YH65_01130 ffa4f39097810f89d3efc62b6991aaee 520 SUPERFAMILY SSF53067 253 499 1.3E-45 T 11-10-2018 YH65_01130 ffa4f39097810f89d3efc62b6991aaee 520 PIRSF PIRSF000538 1 508 5.2E-133 T 11-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 YH65_01130 ffa4f39097810f89d3efc62b6991aaee 520 Gene3D G3DSA:3.30.420.40 1 246 4.0E-59 T 11-10-2018 YH65_01130 ffa4f39097810f89d3efc62b6991aaee 520 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 3 247 2.4E-45 T 11-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 YH65_01130 ffa4f39097810f89d3efc62b6991aaee 520 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 292 456 9.9E-19 T 11-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 YH65_01130 ffa4f39097810f89d3efc62b6991aaee 520 Gene3D G3DSA:3.30.420.40 247 508 8.7E-49 T 11-10-2018 YH65_09790 de71f9807bf034d24d6af4ebf2e13b63 441 Pfam PF02080 TrkA-C domain 172 215 3.5E-7 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YH65_09790 de71f9807bf034d24d6af4ebf2e13b63 441 Gene3D G3DSA:3.40.50.720 225 351 4.1E-23 T 11-10-2018 YH65_09790 de71f9807bf034d24d6af4ebf2e13b63 441 Gene3D G3DSA:3.40.50.720 3 134 5.2E-30 T 11-10-2018 YH65_09790 de71f9807bf034d24d6af4ebf2e13b63 441 Gene3D G3DSA:3.30.70.1450 135 219 2.9E-10 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 YH65_09790 de71f9807bf034d24d6af4ebf2e13b63 441 SUPERFAMILY SSF51735 1 128 6.11E-21 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily YH65_09790 de71f9807bf034d24d6af4ebf2e13b63 441 PRINTS PR00335 TrkA potassium uptake protein signature 18 32 6.9E-7 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 YH65_09790 de71f9807bf034d24d6af4ebf2e13b63 441 PRINTS PR00335 TrkA potassium uptake protein signature 298 312 6.9E-7 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 YH65_09790 de71f9807bf034d24d6af4ebf2e13b63 441 PRINTS PR00335 TrkA potassium uptake protein signature 285 295 6.9E-7 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 YH65_09790 de71f9807bf034d24d6af4ebf2e13b63 441 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 6.9E-7 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 YH65_09790 de71f9807bf034d24d6af4ebf2e13b63 441 Gene3D G3DSA:3.30.70.1450 352 439 1.8E-5 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 YH65_09790 de71f9807bf034d24d6af4ebf2e13b63 441 SUPERFAMILY SSF116726 363 438 6.54E-6 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 YH65_09790 de71f9807bf034d24d6af4ebf2e13b63 441 Pfam PF02254 TrkA-N domain 3 120 1.4E-21 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 YH65_09790 de71f9807bf034d24d6af4ebf2e13b63 441 Pfam PF02254 TrkA-N domain 226 339 2.6E-15 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 YH65_09790 de71f9807bf034d24d6af4ebf2e13b63 441 SUPERFAMILY SSF51735 225 341 1.53E-19 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily YH65_09790 de71f9807bf034d24d6af4ebf2e13b63 441 SUPERFAMILY SSF116726 172 216 8.11E-7 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 YH65_09240 37406cd5c831c408ae61a627f1fe6bca 196 Pfam PF01063 Amino-transferase class IV 95 186 1.2E-12 T 11-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 YH65_09240 37406cd5c831c408ae61a627f1fe6bca 196 SUPERFAMILY SSF56752 8 186 1.19E-22 T 11-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 YH65_09240 37406cd5c831c408ae61a627f1fe6bca 196 Gene3D G3DSA:3.20.10.10 80 186 4.7E-26 T 11-10-2018 YH65_09240 37406cd5c831c408ae61a627f1fe6bca 196 Gene3D G3DSA:3.30.470.10 4 78 5.1E-17 T 11-10-2018 YH65_08950 0e2b6b6151b6d292d01ebf7063aa9484 351 Gene3D G3DSA:3.80.30.20 1 285 6.6E-83 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe YH65_08950 0e2b6b6151b6d292d01ebf7063aa9484 351 Pfam PF04055 Radical SAM superfamily 5 168 4.0E-18 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 YH65_08950 0e2b6b6151b6d292d01ebf7063aa9484 351 SUPERFAMILY SSF102114 2 335 2.22E-82 T 11-10-2018 YH65_08950 0e2b6b6151b6d292d01ebf7063aa9484 351 SMART SM00729 1 215 2.4E-39 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 YH65_08950 0e2b6b6151b6d292d01ebf7063aa9484 351 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 2 348 3.9E-91 T 11-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 YH65_04490 9fd1db2ec74f2f34836dd846e081f391 260 SUPERFAMILY SSF51161 3 254 1.38E-71 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily YH65_04490 9fd1db2ec74f2f34836dd846e081f391 260 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 1 256 43.431 T 11-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 YH65_04490 9fd1db2ec74f2f34836dd846e081f391 260 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 176 254 7.7E-22 T 11-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 YH65_04490 9fd1db2ec74f2f34836dd846e081f391 260 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 4 254 4.1E-101 T 11-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 YH65_04490 9fd1db2ec74f2f34836dd846e081f391 260 PIRSF PIRSF000456 1 260 7.5E-102 T 11-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 YH65_04490 9fd1db2ec74f2f34836dd846e081f391 260 Gene3D G3DSA:1.20.1180.10 194 260 4.3E-19 T 11-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 YH65_04490 9fd1db2ec74f2f34836dd846e081f391 260 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 131 159 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 YH65_04490 9fd1db2ec74f2f34836dd846e081f391 260 Gene3D G3DSA:2.160.10.10 1 190 1.9E-50 T 11-10-2018 YH65_04490 9fd1db2ec74f2f34836dd846e081f391 260 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 105 139 7.0E-7 T 11-10-2018 IPR001451 Hexapeptide repeat YH65_04490 9fd1db2ec74f2f34836dd846e081f391 260 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 13 48 5.7E-11 T 11-10-2018 IPR001451 Hexapeptide repeat YH65_06030 f436907c9668e1ccc4a2eb5c38e7a197 551 Gene3D G3DSA:3.30.565.10 393 543 1.1E-18 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YH65_06030 f436907c9668e1ccc4a2eb5c38e7a197 551 Gene3D G3DSA:3.30.450.20 38 212 1.4E-39 T 11-10-2018 YH65_06030 f436907c9668e1ccc4a2eb5c38e7a197 551 SMART SM01049 49 144 1.7E-17 T 11-10-2018 IPR033480 Single Cache domain 2 YH65_06030 f436907c9668e1ccc4a2eb5c38e7a197 551 Pfam PF08269 Cache domain 36 201 5.0E-36 T 11-10-2018 IPR004010 Double Cache domain 2 YH65_06030 f436907c9668e1ccc4a2eb5c38e7a197 551 SUPERFAMILY SSF55874 394 529 8.25E-18 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YH65_06030 f436907c9668e1ccc4a2eb5c38e7a197 551 SUPERFAMILY SSF47384 324 390 1.0E-6 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 YH65_06030 f436907c9668e1ccc4a2eb5c38e7a197 551 Gene3D G3DSA:1.10.287.130 293 390 1.2E-7 T 11-10-2018 YH65_06030 f436907c9668e1ccc4a2eb5c38e7a197 551 SMART SM00388 330 392 5.1E-4 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YH65_06030 f436907c9668e1ccc4a2eb5c38e7a197 551 SMART SM00387 435 541 4.9E-11 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YH65_06030 f436907c9668e1ccc4a2eb5c38e7a197 551 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 438 528 3.4E-9 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YH65_05770 e534bc4b3906cf858d222e6851bd4daf 154 Gene3D G3DSA:2.40.320.10 1 150 5.4E-46 T 11-10-2018 YH65_05770 e534bc4b3906cf858d222e6851bd4daf 154 SMART SM01118 2 148 4.7E-21 T 11-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 YH65_05770 e534bc4b3906cf858d222e6851bd4daf 154 PIRSF PIRSF016487 1 154 2.2E-54 T 11-10-2018 IPR012042 Inorganic triphosphatase NeuTTM/CthTTM-like YH65_05770 e534bc4b3906cf858d222e6851bd4daf 154 Pfam PF01928 CYTH domain 3 138 9.8E-14 T 11-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 YH65_05770 e534bc4b3906cf858d222e6851bd4daf 154 SUPERFAMILY SSF55154 1 148 1.8E-40 T 11-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 YH65_09390 145d3d31f062aec71dbe99a7a143c6eb 446 ProSitePatterns PS01276 Peptidase family U32 signature. 166 184 - T 11-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 YH65_09390 145d3d31f062aec71dbe99a7a143c6eb 446 Pfam PF01136 Peptidase family U32 82 311 6.1E-82 T 11-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 YH65_00320 904a8389ef14f3074d698cf131280c29 223 ProSitePatterns PS00517 Ribonuclease III family signature. 37 45 - T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 YH65_00320 904a8389ef14f3074d698cf131280c29 223 Gene3D G3DSA:1.10.1520.10 4 145 6.2E-47 T 11-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 YH65_00320 904a8389ef14f3074d698cf131280c29 223 SUPERFAMILY SSF69065 4 157 2.96E-47 T 11-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 YH65_00320 904a8389ef14f3074d698cf131280c29 223 Pfam PF00035 Double-stranded RNA binding motif 155 221 3.0E-16 T 11-10-2018 IPR014720 Double-stranded RNA-binding domain YH65_00320 904a8389ef14f3074d698cf131280c29 223 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 7 221 3.1E-73 T 11-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 YH65_00320 904a8389ef14f3074d698cf131280c29 223 Pfam PF14622 Ribonuclease-III-like 17 136 6.4E-34 T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 YH65_00320 904a8389ef14f3074d698cf131280c29 223 SMART SM00358 155 222 6.1E-22 T 11-10-2018 IPR014720 Double-stranded RNA-binding domain YH65_00320 904a8389ef14f3074d698cf131280c29 223 SUPERFAMILY SSF54768 109 221 8.17E-25 T 11-10-2018 YH65_00320 904a8389ef14f3074d698cf131280c29 223 SMART SM00535 19 151 4.0E-47 T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 YH65_00320 904a8389ef14f3074d698cf131280c29 223 Hamap MF_00104 Ribonuclease 3 [rnc]. 7 218 29.898 T 11-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 YH65_00320 904a8389ef14f3074d698cf131280c29 223 Gene3D G3DSA:3.30.160.20 153 222 2.2E-22 T 11-10-2018 YH65_03705 4374145b6718ce39fba2a2b92d0a66b2 488 Gene3D G3DSA:3.40.50.1100 111 442 1.6E-110 T 11-10-2018 YH65_03705 4374145b6718ce39fba2a2b92d0a66b2 488 TIGRFAM TIGR00260 thrC: threonine synthase 72 437 3.9E-79 T 11-10-2018 IPR004450 Threonine synthase-like YH65_03705 4374145b6718ce39fba2a2b92d0a66b2 488 Gene3D G3DSA:3.90.1380.10 1 89 1.3E-12 T 11-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily YH65_03705 4374145b6718ce39fba2a2b92d0a66b2 488 Pfam PF14821 Threonine synthase N terminus 3 81 1.5E-11 T 11-10-2018 IPR029144 Threonine synthase, N-terminal YH65_03705 4374145b6718ce39fba2a2b92d0a66b2 488 SUPERFAMILY SSF53686 1 444 9.41E-125 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme YH65_03705 4374145b6718ce39fba2a2b92d0a66b2 488 Gene3D G3DSA:3.40.50.1100 99 441 1.6E-110 T 11-10-2018 YH65_03705 4374145b6718ce39fba2a2b92d0a66b2 488 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 102 411 2.6E-13 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme YH65_04990 f1938c5ba6254217aa6e5a4873b0fba6 367 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 27 45 9.1E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 YH65_04990 f1938c5ba6254217aa6e5a4873b0fba6 367 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 9.1E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 YH65_04990 f1938c5ba6254217aa6e5a4873b0fba6 367 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 71 86 9.1E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 YH65_04990 f1938c5ba6254217aa6e5a4873b0fba6 367 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 88 106 9.1E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 YH65_04990 f1938c5ba6254217aa6e5a4873b0fba6 367 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 367 5.1E-149 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 YH65_04990 f1938c5ba6254217aa6e5a4873b0fba6 367 PIRSF PIRSF006641 1 367 1.3E-154 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 YH65_04990 f1938c5ba6254217aa6e5a4873b0fba6 367 SUPERFAMILY SSF52540 4 305 6.75E-76 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_04990 f1938c5ba6254217aa6e5a4873b0fba6 367 Pfam PF06071 Protein of unknown function (DUF933) 283 366 3.3E-41 T 11-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 YH65_04990 f1938c5ba6254217aa6e5a4873b0fba6 367 Pfam PF01926 50S ribosome-binding GTPase 5 123 1.0E-21 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 YH65_04990 f1938c5ba6254217aa6e5a4873b0fba6 367 Gene3D G3DSA:3.10.20.30 49 365 2.2E-145 T 11-10-2018 IPR012675 Beta-grasp domain superfamily YH65_04990 f1938c5ba6254217aa6e5a4873b0fba6 367 Gene3D G3DSA:1.10.150.300 114 203 2.2E-145 T 11-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 YH65_04990 f1938c5ba6254217aa6e5a4873b0fba6 367 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 367 42.626 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 YH65_04990 f1938c5ba6254217aa6e5a4873b0fba6 367 SUPERFAMILY SSF81271 283 364 2.83E-37 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 YH65_04990 f1938c5ba6254217aa6e5a4873b0fba6 367 Gene3D G3DSA:3.40.50.300 4 282 2.2E-145 T 11-10-2018 YH65_00335 1433b3044fdab67b1af6f088d04fa144 550 SUPERFAMILY SSF56731 108 405 8.63E-85 T 11-10-2018 YH65_00335 1433b3044fdab67b1af6f088d04fa144 550 Gene3D G3DSA:3.40.1360.10 228 351 1.5E-37 T 11-10-2018 YH65_00335 1433b3044fdab67b1af6f088d04fa144 550 Hamap MF_00974 DNA primase [dnaG]. 1 532 25.663 T 11-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 YH65_00335 1433b3044fdab67b1af6f088d04fa144 550 SMART SM00493 246 317 1.7E-20 T 11-10-2018 IPR006171 TOPRIM domain YH65_00335 1433b3044fdab67b1af6f088d04fa144 550 Gene3D G3DSA:3.90.980.10 101 227 2.0E-29 T 11-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily YH65_00335 1433b3044fdab67b1af6f088d04fa144 550 PIRSF PIRSF002811 1 538 2.9E-139 T 11-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 YH65_00335 1433b3044fdab67b1af6f088d04fa144 550 Pfam PF08275 DNA primase catalytic core, N-terminal domain 116 238 1.8E-32 T 11-10-2018 IPR013264 DNA primase, catalytic core, N-terminal YH65_00335 1433b3044fdab67b1af6f088d04fa144 550 Pfam PF16730 DnaG-primase C-terminal, helicase-binding domain 428 546 2.4E-41 T 11-10-2018 IPR031988 DNA primase DnaG, C-terminal helicase-binding domain YH65_00335 1433b3044fdab67b1af6f088d04fa144 550 SUPERFAMILY SSF57783 1 97 1.87E-36 T 11-10-2018 YH65_00335 1433b3044fdab67b1af6f088d04fa144 550 Pfam PF01807 CHC2 zinc finger 4 97 7.3E-39 T 11-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 YH65_00335 1433b3044fdab67b1af6f088d04fa144 550 Gene3D G3DSA:3.90.580.10 3 98 4.0E-38 T 11-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 YH65_00335 1433b3044fdab67b1af6f088d04fa144 550 Pfam PF13662 Toprim domain 247 315 9.8E-17 T 11-10-2018 IPR006171 TOPRIM domain YH65_00335 1433b3044fdab67b1af6f088d04fa144 550 SMART SM00400 33 87 3.6E-34 T 11-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 YH65_00335 1433b3044fdab67b1af6f088d04fa144 550 Gene3D G3DSA:1.10.860.10 423 550 6.2E-28 T 11-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal YH65_00335 1433b3044fdab67b1af6f088d04fa144 550 TIGRFAM TIGR01391 dnaG: DNA primase 1 396 8.9E-132 T 11-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 YH65_02120 94f4973a9d89c6b854a62a6af5918d43 294 SUPERFAMILY SSF54211 1 121 2.12E-37 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold YH65_02120 94f4973a9d89c6b854a62a6af5918d43 294 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 1 283 2.6E-112 T 11-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 YH65_02120 94f4973a9d89c6b854a62a6af5918d43 294 Gene3D G3DSA:3.30.1700.10 125 293 3.7E-56 T 11-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 YH65_02120 94f4973a9d89c6b854a62a6af5918d43 294 SUPERFAMILY SSF54211 130 272 5.76E-45 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold YH65_02120 94f4973a9d89c6b854a62a6af5918d43 294 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 3 270 1.5E-97 T 11-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 YH65_02120 94f4973a9d89c6b854a62a6af5918d43 294 Gene3D G3DSA:3.30.230.20 1 124 1.2E-39 T 11-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 YH65_02120 94f4973a9d89c6b854a62a6af5918d43 294 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 1 274 41.219 T 11-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 YH65_03225 c6ae268d3541824aa96cd6b616142789 466 SUPERFAMILY SSF50615 1 76 6.02E-21 T 11-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 YH65_03225 c6ae268d3541824aa96cd6b616142789 466 Gene3D G3DSA:1.10.1140.10 348 466 1.7E-56 T 11-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 YH65_03225 c6ae268d3541824aa96cd6b616142789 466 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 2 462 6.1E-253 T 11-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 YH65_03225 c6ae268d3541824aa96cd6b616142789 466 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 463 54.577 T 11-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 YH65_03225 c6ae268d3541824aa96cd6b616142789 466 SUPERFAMILY SSF52540 79 350 4.69E-92 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_03225 c6ae268d3541824aa96cd6b616142789 466 SUPERFAMILY SSF47917 348 463 9.68E-52 T 11-10-2018 YH65_03225 c6ae268d3541824aa96cd6b616142789 466 Gene3D G3DSA:3.40.50.300 78 347 5.7E-113 T 11-10-2018 YH65_03225 c6ae268d3541824aa96cd6b616142789 466 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 336 345 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 YH65_03225 c6ae268d3541824aa96cd6b616142789 466 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 5 75 1.6E-17 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 YH65_03225 c6ae268d3541824aa96cd6b616142789 466 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 132 345 2.4E-64 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 YH65_03225 c6ae268d3541824aa96cd6b616142789 466 SMART SM00382 144 322 7.6E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain YH65_03225 c6ae268d3541824aa96cd6b616142789 466 Gene3D G3DSA:2.40.10.170 1 77 1.9E-27 T 11-10-2018 YH65_01215 7ff0b355e068ada0ac6b168548d52e28 1385 Gene3D G3DSA:2.40.270.10 1069 1276 2.6E-76 T 11-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YH65_01215 7ff0b355e068ada0ac6b168548d52e28 1385 Pfam PF04561 RNA polymerase Rpb2, domain 2 363 470 2.6E-19 T 11-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YH65_01215 7ff0b355e068ada0ac6b168548d52e28 1385 Pfam PF04561 RNA polymerase Rpb2, domain 2 156 257 3.9E-10 T 11-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YH65_01215 7ff0b355e068ada0ac6b168548d52e28 1385 Pfam PF00562 RNA polymerase Rpb2, domain 6 736 1297 1.3E-145 T 11-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YH65_01215 7ff0b355e068ada0ac6b168548d52e28 1385 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 10 1372 0.0 T 11-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YH65_01215 7ff0b355e068ada0ac6b168548d52e28 1385 Gene3D G3DSA:2.40.50.100 732 806 2.3E-23 T 11-10-2018 YH65_01215 7ff0b355e068ada0ac6b168548d52e28 1385 Pfam PF04563 RNA polymerase beta subunit 27 518 1.6E-21 T 11-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YH65_01215 7ff0b355e068ada0ac6b168548d52e28 1385 Pfam PF04565 RNA polymerase Rpb2, domain 3 531 599 8.0E-31 T 11-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YH65_01215 7ff0b355e068ada0ac6b168548d52e28 1385 Gene3D G3DSA:3.90.1100.10 433 659 1.2E-68 T 11-10-2018 YH65_01215 7ff0b355e068ada0ac6b168548d52e28 1385 Gene3D G3DSA:3.90.1100.10 660 731 5.7E-17 T 11-10-2018 YH65_01215 7ff0b355e068ada0ac6b168548d52e28 1385 Gene3D G3DSA:3.90.1100.10 18 174 4.4E-46 T 11-10-2018 YH65_01215 7ff0b355e068ada0ac6b168548d52e28 1385 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1095 1107 - T 11-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YH65_01215 7ff0b355e068ada0ac6b168548d52e28 1385 Pfam PF10385 RNA polymerase beta subunit external 1 domain 609 674 1.5E-17 T 11-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YH65_01215 7ff0b355e068ada0ac6b168548d52e28 1385 SUPERFAMILY SSF64484 11 1378 0.0 T 11-10-2018 YH65_01215 7ff0b355e068ada0ac6b168548d52e28 1385 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1376 11.493 T 11-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YH65_01215 7ff0b355e068ada0ac6b168548d52e28 1385 Gene3D G3DSA:2.40.50.150 847 967 3.0E-36 T 11-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YH65_01215 7ff0b355e068ada0ac6b168548d52e28 1385 Pfam PF04560 RNA polymerase Rpb2, domain 7 1300 1374 2.1E-23 T 11-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YH65_01215 7ff0b355e068ada0ac6b168548d52e28 1385 Gene3D G3DSA:3.90.1800.10 1286 1342 6.1E-10 T 11-10-2018 YH65_01215 7ff0b355e068ada0ac6b168548d52e28 1385 Gene3D G3DSA:2.40.270.10 807 846 9.8E-7 T 11-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YH65_05995 9e88ffa9d05d469d6fe41002b3cff819 651 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 23 78 4.5E-17 T 11-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 YH65_05995 9e88ffa9d05d469d6fe41002b3cff819 651 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 18 642 2.4E-290 T 11-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 YH65_05995 9e88ffa9d05d469d6fe41002b3cff819 651 ProSitePatterns PS00455 Putative AMP-binding domain signature. 257 268 - T 11-10-2018 IPR020845 AMP-binding, conserved site YH65_05995 9e88ffa9d05d469d6fe41002b3cff819 651 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 1 646 49.121 T 11-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 YH65_05995 9e88ffa9d05d469d6fe41002b3cff819 651 SUPERFAMILY SSF56801 12 637 4.71E-171 T 11-10-2018 YH65_05995 9e88ffa9d05d469d6fe41002b3cff819 651 Pfam PF13193 AMP-binding enzyme C-terminal domain 531 611 7.7E-21 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain YH65_05995 9e88ffa9d05d469d6fe41002b3cff819 651 Gene3D G3DSA:3.40.50.12780 52 515 3.6E-112 T 11-10-2018 YH65_05995 9e88ffa9d05d469d6fe41002b3cff819 651 Gene3D G3DSA:3.30.300.30 518 649 2.0E-24 T 11-10-2018 YH65_05995 9e88ffa9d05d469d6fe41002b3cff819 651 Pfam PF00501 AMP-binding enzyme 82 522 2.9E-94 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 YH65_03295 f05b1dc048a481ab5b4964d39ba386b2 55 Gene3D G3DSA:2.20.28.10 3 55 1.6E-27 T 11-10-2018 YH65_03295 f05b1dc048a481ab5b4964d39ba386b2 55 Pfam PF00301 Rubredoxin 4 50 3.8E-24 T 11-10-2018 IPR024935 Rubredoxin domain GO:0005506 YH65_03295 f05b1dc048a481ab5b4964d39ba386b2 55 PRINTS PR00163 Rubredoxin signature 4 20 8.6E-12 T 11-10-2018 IPR024935 Rubredoxin domain GO:0005506 YH65_03295 f05b1dc048a481ab5b4964d39ba386b2 55 PRINTS PR00163 Rubredoxin signature 34 50 8.6E-12 T 11-10-2018 IPR024935 Rubredoxin domain GO:0005506 YH65_03295 f05b1dc048a481ab5b4964d39ba386b2 55 SUPERFAMILY SSF57802 3 54 9.09E-23 T 11-10-2018 YH65_03295 f05b1dc048a481ab5b4964d39ba386b2 55 ProSitePatterns PS00202 Rubredoxin signature. 34 44 - T 11-10-2018 IPR018527 Rubredoxin, iron-binding site GO:0046872 YH65_03295 f05b1dc048a481ab5b4964d39ba386b2 55 PIRSF PIRSF000071 1 55 1.7E-27 T 11-10-2018 IPR024922 Rubredoxin GO:0005506|GO:0009055 YH65_05940 427f655f06f0af58caf09b0177b8a8ed 230 SUPERFAMILY SSF53254 1 222 2.75E-61 T 11-10-2018 IPR029033 Histidine phosphatase superfamily YH65_05940 427f655f06f0af58caf09b0177b8a8ed 230 PIRSF PIRSF000709 143 228 1.3 T 11-10-2018 YH65_05940 427f655f06f0af58caf09b0177b8a8ed 230 PIRSF PIRSF000709 2 112 1.4E-4 T 11-10-2018 YH65_05940 427f655f06f0af58caf09b0177b8a8ed 230 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 123 5.7E-24 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 YH65_05940 427f655f06f0af58caf09b0177b8a8ed 230 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 139 227 3.0E-6 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 YH65_05940 427f655f06f0af58caf09b0177b8a8ed 230 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 2 229 36.409 T 11-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 YH65_05940 427f655f06f0af58caf09b0177b8a8ed 230 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 7 16 - T 11-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 YH65_05940 427f655f06f0af58caf09b0177b8a8ed 230 SMART SM00855 4 190 1.0E-24 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 YH65_05940 427f655f06f0af58caf09b0177b8a8ed 230 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 4 227 2.0E-81 T 11-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 YH65_05940 427f655f06f0af58caf09b0177b8a8ed 230 Gene3D G3DSA:3.40.50.1240 1 230 1.4E-72 T 11-10-2018 IPR029033 Histidine phosphatase superfamily YH65_08525 da94a021b98dfeb9a6954eeb03bc019d 756 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 2 754 33.623 T 11-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 YH65_08525 da94a021b98dfeb9a6954eeb03bc019d 756 PIRSF PIRSF000382 1 756 0.0 T 11-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 YH65_08525 da94a021b98dfeb9a6954eeb03bc019d 756 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 427 748 8.8E-143 T 11-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 YH65_08525 da94a021b98dfeb9a6954eeb03bc019d 756 SUPERFAMILY SSF51726 6 392 8.37E-100 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 YH65_08525 da94a021b98dfeb9a6954eeb03bc019d 756 Gene3D G3DSA:3.20.20.210 387 752 0.0 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 YH65_08525 da94a021b98dfeb9a6954eeb03bc019d 756 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 8 754 0.0 T 11-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 YH65_08525 da94a021b98dfeb9a6954eeb03bc019d 756 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 4 310 2.3E-112 T 11-10-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 YH65_08525 da94a021b98dfeb9a6954eeb03bc019d 756 SUPERFAMILY SSF51726 403 754 2.49E-107 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 YH65_08525 da94a021b98dfeb9a6954eeb03bc019d 756 Gene3D G3DSA:3.20.20.210 6 520 0.0 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 YH65_02805 f78b58ad0af69caa05c315d52619e5df 287 SUPERFAMILY SSF143631 1 269 3.66E-54 T 11-10-2018 IPR003374 ApbE-like superfamily YH65_02805 f78b58ad0af69caa05c315d52619e5df 287 Gene3D G3DSA:3.10.520.20 1 279 1.1E-60 T 11-10-2018 YH65_02805 f78b58ad0af69caa05c315d52619e5df 287 PIRSF PIRSF006268 1 275 9.0E-47 T 11-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 YH65_02805 f78b58ad0af69caa05c315d52619e5df 287 Pfam PF02424 ApbE family 1 261 2.4E-57 T 11-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 YH65_06835 905d03718766a7be2244ed76ef6f186f 221 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YH65_06835 905d03718766a7be2244ed76ef6f186f 221 SUPERFAMILY SSF52540 1 218 3.1E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_06835 905d03718766a7be2244ed76ef6f186f 221 SMART SM00382 26 214 1.2E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain YH65_06835 905d03718766a7be2244ed76ef6f186f 221 Gene3D G3DSA:3.40.50.300 1 220 7.2E-68 T 11-10-2018 YH65_06835 905d03718766a7be2244ed76ef6f186f 221 Pfam PF00005 ABC transporter 17 164 2.9E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YH65_02490 9830a8298c8cbae7cd3d05a1a5d7b4ae 412 Pfam PF05193 Peptidase M16 inactive domain 168 343 8.3E-22 T 11-10-2018 IPR007863 Peptidase M16, C-terminal YH65_02490 9830a8298c8cbae7cd3d05a1a5d7b4ae 412 Gene3D G3DSA:3.30.830.10 223 412 1.0E-40 T 11-10-2018 YH65_02490 9830a8298c8cbae7cd3d05a1a5d7b4ae 412 SUPERFAMILY SSF63411 12 214 1.75E-35 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 YH65_02490 9830a8298c8cbae7cd3d05a1a5d7b4ae 412 Pfam PF00675 Insulinase (Peptidase family M16) 33 159 5.0E-11 T 11-10-2018 IPR011765 Peptidase M16, N-terminal YH65_02490 9830a8298c8cbae7cd3d05a1a5d7b4ae 412 SUPERFAMILY SSF63411 230 410 8.83E-35 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 YH65_02490 9830a8298c8cbae7cd3d05a1a5d7b4ae 412 Gene3D G3DSA:3.30.830.10 13 215 3.1E-31 T 11-10-2018 YH65_10355 895ba1049a0fabb2135cbfda0e26300c 355 Pfam PF03462 PCRF domain 11 200 1.5E-68 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 YH65_10355 895ba1049a0fabb2135cbfda0e26300c 355 Gene3D G3DSA:3.30.70.1660 109 338 1.1E-93 T 11-10-2018 YH65_10355 895ba1049a0fabb2135cbfda0e26300c 355 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 4 352 1.2E-156 T 11-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 YH65_10355 895ba1049a0fabb2135cbfda0e26300c 355 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 224 240 - T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 YH65_10355 895ba1049a0fabb2135cbfda0e26300c 355 SUPERFAMILY SSF75620 10 350 9.42E-129 T 11-10-2018 YH65_10355 895ba1049a0fabb2135cbfda0e26300c 355 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 2 354 39.241 T 11-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 YH65_10355 895ba1049a0fabb2135cbfda0e26300c 355 Gene3D G3DSA:3.30.160.20 207 293 1.1E-93 T 11-10-2018 YH65_10355 895ba1049a0fabb2135cbfda0e26300c 355 Pfam PF00472 RF-1 domain 207 317 4.4E-39 T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 YH65_10355 895ba1049a0fabb2135cbfda0e26300c 355 SMART SM00937 64 175 1.4E-59 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 YH65_05445 9a7850ec6a936d65d448804c5ed17798 350 Gene3D G3DSA:1.20.1090.10 165 347 4.5E-62 T 11-10-2018 YH65_05445 9a7850ec6a936d65d448804c5ed17798 350 SUPERFAMILY SSF56796 19 344 1.05E-105 T 11-10-2018 YH65_05445 9a7850ec6a936d65d448804c5ed17798 350 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 19 341 4.0E-117 T 11-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 YH65_05445 9a7850ec6a936d65d448804c5ed17798 350 PIRSF PIRSF001455 7 349 7.9E-108 T 11-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 YH65_05445 9a7850ec6a936d65d448804c5ed17798 350 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 4 343 64.354 T 11-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 YH65_05445 9a7850ec6a936d65d448804c5ed17798 350 Pfam PF01761 3-dehydroquinate synthase 59 312 3.7E-104 T 11-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 YH65_05445 9a7850ec6a936d65d448804c5ed17798 350 Gene3D G3DSA:3.40.50.1970 1 164 7.5E-60 T 11-10-2018 YH65_03830 388f806d78e556360822d64a5ef561dd 144 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 105 115 - T 11-10-2018 IPR020549 Endoribonuclease YbeY, conserved site YH65_03830 388f806d78e556360822d64a5ef561dd 144 Pfam PF02130 Uncharacterized protein family UPF0054 16 133 2.5E-38 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 YH65_03830 388f806d78e556360822d64a5ef561dd 144 SUPERFAMILY SSF55486 3 142 2.22E-37 T 11-10-2018 YH65_03830 388f806d78e556360822d64a5ef561dd 144 Gene3D G3DSA:3.40.390.30 2 143 5.5E-41 T 11-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 YH65_03830 388f806d78e556360822d64a5ef561dd 144 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 9 137 23.052 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 YH65_03830 388f806d78e556360822d64a5ef561dd 144 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 28 133 2.9E-36 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 YH65_10295 129d646ac13f7a8bb2a0e5c800a45659 173 ProSitePatterns PS01265 Tpx family signature. 85 96 - T 11-10-2018 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 KEGG: 00480+1.11.1.15 YH65_10295 129d646ac13f7a8bb2a0e5c800a45659 173 Pfam PF08534 Redoxin 21 164 3.5E-18 T 11-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 YH65_10295 129d646ac13f7a8bb2a0e5c800a45659 173 SUPERFAMILY SSF52833 4 165 5.87E-38 T 11-10-2018 IPR036249 Thioredoxin-like superfamily YH65_10295 129d646ac13f7a8bb2a0e5c800a45659 173 Gene3D G3DSA:3.40.30.10 2 170 2.0E-40 T 11-10-2018 YH65_07615 283c5cd0c79d49fb81f1eb5a43f7df15 259 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 257 5.8E-61 T 11-10-2018 YH65_07615 283c5cd0c79d49fb81f1eb5a43f7df15 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.4E-29 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YH65_07615 283c5cd0c79d49fb81f1eb5a43f7df15 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 1.4E-29 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YH65_07615 283c5cd0c79d49fb81f1eb5a43f7df15 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 183 1.4E-29 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YH65_07615 283c5cd0c79d49fb81f1eb5a43f7df15 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 202 1.4E-29 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YH65_07615 283c5cd0c79d49fb81f1eb5a43f7df15 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.4E-29 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YH65_07615 283c5cd0c79d49fb81f1eb5a43f7df15 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 138 154 1.4E-29 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YH65_07615 283c5cd0c79d49fb81f1eb5a43f7df15 259 SUPERFAMILY SSF51735 5 257 1.8E-68 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily YH65_07615 283c5cd0c79d49fb81f1eb5a43f7df15 259 Gene3D G3DSA:3.40.50.720 1 258 9.2E-62 T 11-10-2018 YH65_02945 2d0f6e27d7b3f19b9c2981bf8dd48535 229 Gene3D G3DSA:1.10.10.10 138 229 1.5E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YH65_02945 2d0f6e27d7b3f19b9c2981bf8dd48535 229 Gene3D G3DSA:3.40.50.2300 5 134 4.9E-31 T 11-10-2018 YH65_02945 2d0f6e27d7b3f19b9c2981bf8dd48535 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 226 9.4E-14 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YH65_02945 2d0f6e27d7b3f19b9c2981bf8dd48535 229 SUPERFAMILY SSF52172 8 171 4.7E-35 T 11-10-2018 IPR011006 CheY-like superfamily YH65_02945 2d0f6e27d7b3f19b9c2981bf8dd48535 229 Pfam PF00072 Response regulator receiver domain 11 119 3.9E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YH65_02945 2d0f6e27d7b3f19b9c2981bf8dd48535 229 SUPERFAMILY SSF46894 148 226 3.06E-10 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YH65_02945 2d0f6e27d7b3f19b9c2981bf8dd48535 229 SMART SM00862 153 226 1.5E-11 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YH65_02945 2d0f6e27d7b3f19b9c2981bf8dd48535 229 SMART SM00448 9 120 4.0E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YH65_08025 1c359e2a34ce1d39c9134929d7585f93 277 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 28 271 1.0E-65 T 11-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 YH65_08025 1c359e2a34ce1d39c9134929d7585f93 277 Gene3D G3DSA:1.10.8.10 5 83 1.7E-18 T 11-10-2018 YH65_08025 1c359e2a34ce1d39c9134929d7585f93 277 Gene3D G3DSA:3.40.50.150 84 276 1.2E-48 T 11-10-2018 YH65_08025 1c359e2a34ce1d39c9134929d7585f93 277 SUPERFAMILY SSF53335 5 257 2.99E-41 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YH65_08025 1c359e2a34ce1d39c9134929d7585f93 277 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 184 190 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 YH65_08025 1c359e2a34ce1d39c9134929d7585f93 277 Pfam PF05175 Methyltransferase small domain 110 192 2.0E-11 T 11-10-2018 IPR007848 Methyltransferase small domain GO:0008168 YH65_08025 1c359e2a34ce1d39c9134929d7585f93 277 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 5 275 1.4E-63 T 11-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 YH65_09680 c2bf0d87c9e7fdd73bb41a34eaaae8dc 360 Pfam PF03150 Di-haem cytochrome c peroxidase 70 218 1.5E-45 T 11-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 YH65_09680 c2bf0d87c9e7fdd73bb41a34eaaae8dc 360 PIRSF PIRSF000294 15 359 2.6E-98 T 11-10-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 YH65_09680 c2bf0d87c9e7fdd73bb41a34eaaae8dc 360 Pfam PF00034 Cytochrome c 225 350 4.0E-9 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YH65_09680 c2bf0d87c9e7fdd73bb41a34eaaae8dc 360 SUPERFAMILY SSF46626 208 355 1.98E-30 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_09680 c2bf0d87c9e7fdd73bb41a34eaaae8dc 360 Gene3D G3DSA:1.10.760.10 206 352 9.9E-98 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_09680 c2bf0d87c9e7fdd73bb41a34eaaae8dc 360 Gene3D G3DSA:1.10.760.10 66 205 9.9E-98 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_09680 c2bf0d87c9e7fdd73bb41a34eaaae8dc 360 SUPERFAMILY SSF46626 59 206 1.64E-46 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_06795 ddd3ee51103be5b1b10a7fa5ea8263e2 410 Gene3D G3DSA:2.40.50.100 2 102 7.4E-26 T 11-10-2018 YH65_06795 ddd3ee51103be5b1b10a7fa5ea8263e2 410 SUPERFAMILY SSF52777 190 410 1.02E-57 T 11-10-2018 YH65_06795 ddd3ee51103be5b1b10a7fa5ea8263e2 410 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 191 410 3.0E-59 T 11-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 YH65_06795 ddd3ee51103be5b1b10a7fa5ea8263e2 410 Gene3D G3DSA:3.30.559.10 191 410 1.5E-59 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 YH65_06795 ddd3ee51103be5b1b10a7fa5ea8263e2 410 Gene3D G3DSA:4.10.320.10 141 181 1.6E-5 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 YH65_06795 ddd3ee51103be5b1b10a7fa5ea8263e2 410 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 26 55 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 YH65_06795 ddd3ee51103be5b1b10a7fa5ea8263e2 410 Pfam PF00364 Biotin-requiring enzyme 4 75 6.8E-19 T 11-10-2018 IPR000089 Biotin/lipoyl attachment YH65_06795 ddd3ee51103be5b1b10a7fa5ea8263e2 410 SUPERFAMILY SSF51230 3 88 2.62E-23 T 11-10-2018 IPR011053 Single hybrid motif YH65_05875 297134fa42430a2d26cb6492d192570e 337 SUPERFAMILY SSF55347 153 315 2.48E-60 T 11-10-2018 YH65_05875 297134fa42430a2d26cb6492d192570e 337 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 4 103 5.0E-31 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 YH65_05875 297134fa42430a2d26cb6492d192570e 337 Gene3D G3DSA:3.30.360.10 152 316 2.4E-132 T 11-10-2018 YH65_05875 297134fa42430a2d26cb6492d192570e 337 SUPERFAMILY SSF51735 1 182 1.05E-54 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily YH65_05875 297134fa42430a2d26cb6492d192570e 337 Gene3D G3DSA:3.40.50.720 4 330 2.4E-132 T 11-10-2018 YH65_05875 297134fa42430a2d26cb6492d192570e 337 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 151 158 - T 11-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 YH65_05875 297134fa42430a2d26cb6492d192570e 337 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 158 314 2.1E-56 T 11-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 YH65_05875 297134fa42430a2d26cb6492d192570e 337 SMART SM00846 3 153 1.5E-74 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 YH65_05875 297134fa42430a2d26cb6492d192570e 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 147 165 7.7E-33 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 YH65_05875 297134fa42430a2d26cb6492d192570e 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 230 247 7.7E-33 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 YH65_05875 297134fa42430a2d26cb6492d192570e 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 174 190 7.7E-33 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 YH65_05875 297134fa42430a2d26cb6492d192570e 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 110 123 7.7E-33 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 YH65_05875 297134fa42430a2d26cb6492d192570e 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 270 285 7.7E-33 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 YH65_05875 297134fa42430a2d26cb6492d192570e 337 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 325 6.6E-121 T 11-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YH65_05875 297134fa42430a2d26cb6492d192570e 337 PIRSF PIRSF000149 1 336 1.5E-115 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 YH65_05570 90e4952f34ceeca17c022a98a2b41a95 389 Pfam PF00437 Type II/IV secretion system protein 23 273 5.9E-44 T 11-10-2018 IPR001482 Type II/IV secretion system protein YH65_05570 90e4952f34ceeca17c022a98a2b41a95 389 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 12 353 1.1E-117 T 11-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 YH65_05570 90e4952f34ceeca17c022a98a2b41a95 389 SUPERFAMILY SSF52540 4 346 1.5E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_05570 90e4952f34ceeca17c022a98a2b41a95 389 Gene3D G3DSA:3.30.450.90 3 107 1.2E-19 T 11-10-2018 YH65_05570 90e4952f34ceeca17c022a98a2b41a95 389 SMART SM00382 130 256 1.2E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain YH65_05570 90e4952f34ceeca17c022a98a2b41a95 389 Gene3D G3DSA:3.40.50.300 108 367 8.6E-87 T 11-10-2018 YH65_05570 90e4952f34ceeca17c022a98a2b41a95 389 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 201 215 - T 11-10-2018 IPR001482 Type II/IV secretion system protein YH65_02685 b535f641c579ae4621777f5ddf4c07d8 93 SMART SM00411 1 91 8.4E-27 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 YH65_02685 b535f641c579ae4621777f5ddf4c07d8 93 Pfam PF00216 Bacterial DNA-binding protein 1 90 8.8E-24 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 YH65_02685 b535f641c579ae4621777f5ddf4c07d8 93 Gene3D G3DSA:4.10.520.10 1 93 1.0E-22 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 YH65_02685 b535f641c579ae4621777f5ddf4c07d8 93 SUPERFAMILY SSF47729 1 91 5.15E-23 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 YH65_02685 b535f641c579ae4621777f5ddf4c07d8 93 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 1.9E-7 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 YH65_02685 b535f641c579ae4621777f5ddf4c07d8 93 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 1.9E-7 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 YH65_02685 b535f641c579ae4621777f5ddf4c07d8 93 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 1.9E-7 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 YH65_08490 93552927a9fcdc85dce3e8b238087f42 686 Pfam PF00593 TonB dependent receptor 240 684 1.1E-29 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel YH65_08490 93552927a9fcdc85dce3e8b238087f42 686 SUPERFAMILY SSF56935 19 686 4.03E-98 T 11-10-2018 YH65_08490 93552927a9fcdc85dce3e8b238087f42 686 Gene3D G3DSA:2.40.170.20 37 686 2.0E-123 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily YH65_08490 93552927a9fcdc85dce3e8b238087f42 686 Pfam PF07715 TonB-dependent Receptor Plug Domain 43 149 2.6E-12 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain YH65_08490 93552927a9fcdc85dce3e8b238087f42 686 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 669 686 - T 11-10-2018 IPR010917 TonB-dependent receptor, conserved site YH65_07575 e930a74bfcaadaedd868db1199f30978 260 Pfam PF01797 Transposase IS200 like 12 122 1.6E-15 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YH65_07575 e930a74bfcaadaedd868db1199f30978 260 Gene3D G3DSA:3.30.70.1290 1 163 5.5E-36 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 YH65_07575 e930a74bfcaadaedd868db1199f30978 260 SMART SM01321 9 122 5.3E-36 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YH65_07575 e930a74bfcaadaedd868db1199f30978 260 SUPERFAMILY SSF143422 9 123 1.83E-26 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 YH65_03530 4269c5efa7172ed666cb5260c4d45996 112 Gene3D G3DSA:3.40.30.10 8 111 1.2E-12 T 11-10-2018 YH65_03530 4269c5efa7172ed666cb5260c4d45996 112 Pfam PF13098 Thioredoxin-like domain 20 102 5.4E-9 T 11-10-2018 IPR012336 Thioredoxin-like fold YH65_03530 4269c5efa7172ed666cb5260c4d45996 112 SUPERFAMILY SSF52833 15 109 7.84E-14 T 11-10-2018 IPR036249 Thioredoxin-like superfamily YH65_00640 a522beb0349ff0fa678580bbdd4edc1d 440 Gene3D G3DSA:3.80.30.20 137 369 2.1E-62 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe YH65_00640 a522beb0349ff0fa678580bbdd4edc1d 440 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 143 163 - T 11-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 YH65_00640 a522beb0349ff0fa678580bbdd4edc1d 440 Pfam PF04055 Radical SAM superfamily 144 312 2.6E-18 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 YH65_00640 a522beb0349ff0fa678580bbdd4edc1d 440 SUPERFAMILY SSF102114 118 359 4.84E-47 T 11-10-2018 YH65_00640 a522beb0349ff0fa678580bbdd4edc1d 440 Gene3D G3DSA:3.40.50.12160 5 134 3.6E-39 T 11-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily YH65_00640 a522beb0349ff0fa678580bbdd4edc1d 440 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 5 436 58.395 T 11-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 YH65_00640 a522beb0349ff0fa678580bbdd4edc1d 440 SMART SM00729 139 355 1.1E-42 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 YH65_00640 a522beb0349ff0fa678580bbdd4edc1d 440 Pfam PF00919 Uncharacterized protein family UPF0004 6 101 9.9E-27 T 11-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 YH65_00640 a522beb0349ff0fa678580bbdd4edc1d 440 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 6 392 6.2E-104 T 11-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 YH65_00640 a522beb0349ff0fa678580bbdd4edc1d 440 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 6 425 1.2E-117 T 11-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 YH65_04605 1291d9917aae603968d75e9ec26db9d2 237 SUPERFAMILY SSF55846 51 219 1.7E-29 T 11-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 YH65_04605 1291d9917aae603968d75e9ec26db9d2 237 Gene3D G3DSA:3.40.80.10 46 229 2.4E-29 T 11-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 YH65_04605 1291d9917aae603968d75e9ec26db9d2 237 SMART SM00644 59 205 6.9E-4 T 11-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 YH65_04605 1291d9917aae603968d75e9ec26db9d2 237 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 71 214 3.9E-18 T 11-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 YH65_06090 d3ccefe89753588f07b7ca6e06bf7460 164 Gene3D G3DSA:3.40.50.1170 1 159 6.4E-25 T 11-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 YH65_06090 d3ccefe89753588f07b7ca6e06bf7460 164 PRINTS PR00139 Asparaginase/glutaminase family signature 4 15 4.3E-7 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 YH65_06090 d3ccefe89753588f07b7ca6e06bf7460 164 PRINTS PR00139 Asparaginase/glutaminase family signature 75 93 4.3E-7 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 YH65_06090 d3ccefe89753588f07b7ca6e06bf7460 164 SUPERFAMILY SSF53774 1 148 3.4E-30 T 11-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 YH65_06090 d3ccefe89753588f07b7ca6e06bf7460 164 Pfam PF00710 Asparaginase, N-terminal 3 143 2.7E-21 T 11-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 YH65_08130 d1ec3d7781d7b16026160c9f517e7751 105 PIRSF PIRSF033490 2 103 4.1E-22 T 11-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 YH65_08130 d1ec3d7781d7b16026160c9f517e7751 105 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 4 97 5.2E-21 T 11-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 YH65_08130 d1ec3d7781d7b16026160c9f517e7751 105 Gene3D G3DSA:2.30.30.110 1 105 1.2E-25 T 11-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor YH65_08130 d1ec3d7781d7b16026160c9f517e7751 105 SUPERFAMILY SSF50118 4 102 6.05E-26 T 11-10-2018 YH65_04435 0a3f2736330a19c77a48bb3afed2aa52 448 Gene3D G3DSA:1.20.58.760 263 443 9.1E-37 T 11-10-2018 YH65_04435 0a3f2736330a19c77a48bb3afed2aa52 448 SUPERFAMILY SSF52540 14 242 8.78E-32 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_04435 0a3f2736330a19c77a48bb3afed2aa52 448 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 57 172 6.3E-14 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 YH65_04435 0a3f2736330a19c77a48bb3afed2aa52 448 Gene3D G3DSA:1.10.8.60 175 235 2.0E-32 T 11-10-2018 YH65_04435 0a3f2736330a19c77a48bb3afed2aa52 448 SUPERFAMILY SSF140990 259 440 4.97E-38 T 11-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 YH65_04435 0a3f2736330a19c77a48bb3afed2aa52 448 SMART SM00382 52 176 0.0038 T 11-10-2018 IPR003593 AAA+ ATPase domain YH65_04435 0a3f2736330a19c77a48bb3afed2aa52 448 Gene3D G3DSA:3.40.50.300 17 174 2.0E-32 T 11-10-2018 YH65_04435 0a3f2736330a19c77a48bb3afed2aa52 448 Pfam PF01434 Peptidase family M41 259 433 4.2E-26 T 11-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 YH65_07630 f1ba8eccb98c3de19691fb42d5cdcf92 707 SUPERFAMILY SSF52540 5 179 2.74E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_07630 f1ba8eccb98c3de19691fb42d5cdcf92 707 Pfam PF07664 Ferrous iron transport protein B C terminus 464 514 3.6E-15 T 11-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 YH65_07630 f1ba8eccb98c3de19691fb42d5cdcf92 707 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 10 672 2.2E-191 T 11-10-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 YH65_07630 f1ba8eccb98c3de19691fb42d5cdcf92 707 Gene3D G3DSA:3.40.50.300 5 197 2.8E-46 T 11-10-2018 YH65_07630 f1ba8eccb98c3de19691fb42d5cdcf92 707 Pfam PF07670 Nucleoside recognition 523 676 6.1E-30 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 YH65_07630 f1ba8eccb98c3de19691fb42d5cdcf92 707 Pfam PF07670 Nucleoside recognition 359 453 9.1E-14 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 YH65_07630 f1ba8eccb98c3de19691fb42d5cdcf92 707 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 1 164 1.2E-12 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 YH65_07630 f1ba8eccb98c3de19691fb42d5cdcf92 707 Pfam PF02421 Ferrous iron transport protein B 5 165 9.0E-63 T 11-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 YH65_06735 d7cfb35de471f9fb28d1fd6a3657a28c 305 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 33 236 1.3E-18 T 11-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 YH65_06735 d7cfb35de471f9fb28d1fd6a3657a28c 305 PIRSF PIRSF015582 6 302 5.3E-38 T 11-10-2018 IPR011206 Citrate lyase beta subunit-like YH65_06735 d7cfb35de471f9fb28d1fd6a3657a28c 305 Gene3D G3DSA:3.20.20.60 15 300 1.0E-45 T 11-10-2018 YH65_06735 d7cfb35de471f9fb28d1fd6a3657a28c 305 SUPERFAMILY SSF51621 24 248 3.84E-41 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 YH65_02395 f4fb7522894be0ac52f9c5b924bc68fa 404 SUPERFAMILY SSF53697 16 403 1.81E-100 T 11-10-2018 YH65_02395 f4fb7522894be0ac52f9c5b924bc68fa 404 PRINTS PR00662 Glucose-6-phosphate isomerase signature 378 391 2.4E-22 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YH65_02395 f4fb7522894be0ac52f9c5b924bc68fa 404 PRINTS PR00662 Glucose-6-phosphate isomerase signature 56 75 2.4E-22 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YH65_02395 f4fb7522894be0ac52f9c5b924bc68fa 404 PRINTS PR00662 Glucose-6-phosphate isomerase signature 161 179 2.4E-22 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YH65_02395 f4fb7522894be0ac52f9c5b924bc68fa 404 PRINTS PR00662 Glucose-6-phosphate isomerase signature 364 378 2.4E-22 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YH65_02395 f4fb7522894be0ac52f9c5b924bc68fa 404 PRINTS PR00662 Glucose-6-phosphate isomerase signature 346 364 2.4E-22 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YH65_02395 f4fb7522894be0ac52f9c5b924bc68fa 404 PRINTS PR00662 Glucose-6-phosphate isomerase signature 235 256 2.4E-22 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YH65_02395 f4fb7522894be0ac52f9c5b924bc68fa 404 Gene3D G3DSA:3.40.50.10490 18 402 1.1E-104 T 11-10-2018 YH65_02395 f4fb7522894be0ac52f9c5b924bc68fa 404 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 165 178 - T 11-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YH65_02395 f4fb7522894be0ac52f9c5b924bc68fa 404 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 2 404 22.696 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YH65_02395 f4fb7522894be0ac52f9c5b924bc68fa 404 Gene3D G3DSA:3.40.50.10490 36 185 1.1E-104 T 11-10-2018 YH65_02395 f4fb7522894be0ac52f9c5b924bc68fa 404 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 378 395 - T 11-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YH65_02395 f4fb7522894be0ac52f9c5b924bc68fa 404 Pfam PF00342 Phosphoglucose isomerase 52 400 9.8E-38 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YH65_09380 ba6c2f51d6e2f78af68dc53a4c00c1bd 454 Gene3D G3DSA:3.40.50.300 214 408 3.2E-13 T 11-10-2018 YH65_09380 ba6c2f51d6e2f78af68dc53a4c00c1bd 454 Gene3D G3DSA:3.40.50.300 2 166 2.3E-5 T 11-10-2018 YH65_09380 ba6c2f51d6e2f78af68dc53a4c00c1bd 454 Pfam PF13175 AAA ATPase domain 3 394 2.8E-20 T 11-10-2018 YH65_09380 ba6c2f51d6e2f78af68dc53a4c00c1bd 454 SUPERFAMILY SSF52540 15 396 7.78E-18 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_05815 079e078b4572605045ce0c0b484ba793 575 SUPERFAMILY SSF56425 230 348 1.94E-37 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 YH65_05815 079e078b4572605045ce0c0b484ba793 575 SUPERFAMILY SSF51905 6 415 3.48E-73 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_05815 079e078b4572605045ce0c0b484ba793 575 Gene3D G3DSA:3.90.700.10 240 343 1.4E-144 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 YH65_05815 079e078b4572605045ce0c0b484ba793 575 Pfam PF02910 Fumarate reductase flavoprotein C-term 449 575 2.6E-39 T 11-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 YH65_05815 079e078b4572605045ce0c0b484ba793 575 Gene3D G3DSA:1.20.58.100 420 536 1.3E-35 T 11-10-2018 YH65_05815 079e078b4572605045ce0c0b484ba793 575 SUPERFAMILY SSF46977 440 575 1.44E-47 T 11-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 YH65_05815 079e078b4572605045ce0c0b484ba793 575 Gene3D G3DSA:3.50.50.60 13 405 1.4E-144 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_05815 079e078b4572605045ce0c0b484ba793 575 PIRSF PIRSF000171 2 564 1.9E-44 T 11-10-2018 YH65_05815 079e078b4572605045ce0c0b484ba793 575 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 13 575 6.1E-222 T 11-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 YH65_05815 079e078b4572605045ce0c0b484ba793 575 Pfam PF00890 FAD binding domain 13 394 3.3E-106 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 YH65_05815 079e078b4572605045ce0c0b484ba793 575 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 47 56 - T 11-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 YH65_08040 7a18d277505f80e100a3b3745aa6ab26 647 Gene3D G3DSA:3.40.50.300 298 563 9.1E-55 T 11-10-2018 YH65_08040 7a18d277505f80e100a3b3745aa6ab26 647 Pfam PF00005 ABC transporter 351 481 1.5E-20 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YH65_08040 7a18d277505f80e100a3b3745aa6ab26 647 SUPERFAMILY SSF52540 6 239 1.33E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_08040 7a18d277505f80e100a3b3745aa6ab26 647 Gene3D G3DSA:3.40.50.300 4 282 5.3E-70 T 11-10-2018 YH65_08040 7a18d277505f80e100a3b3745aa6ab26 647 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YH65_08040 7a18d277505f80e100a3b3745aa6ab26 647 SMART SM00382 356 525 3.7E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain YH65_08040 7a18d277505f80e100a3b3745aa6ab26 647 SMART SM00382 28 233 1.3E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain YH65_08040 7a18d277505f80e100a3b3745aa6ab26 647 ProSitePatterns PS00211 ABC transporters family signature. 453 467 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YH65_08040 7a18d277505f80e100a3b3745aa6ab26 647 Pfam PF00005 ABC transporter 19 188 1.2E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YH65_08040 7a18d277505f80e100a3b3745aa6ab26 647 Pfam PF12848 ABC transporter 227 299 1.8E-8 T 11-10-2018 IPR032781 ABC-transporter extension domain YH65_08040 7a18d277505f80e100a3b3745aa6ab26 647 Pfam PF16326 ABC transporter C-terminal domain 573 638 1.3E-15 T 11-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 YH65_08040 7a18d277505f80e100a3b3745aa6ab26 647 SUPERFAMILY SSF52540 319 530 4.5E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_08040 7a18d277505f80e100a3b3745aa6ab26 647 Gene3D G3DSA:1.10.287.380 564 643 3.8E-13 T 11-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 YH65_06105 07b5a5ce4e385ec30bcc0340adf1ed6f 447 Gene3D G3DSA:3.40.50.300 1 209 3.3E-65 T 11-10-2018 YH65_06105 07b5a5ce4e385ec30bcc0340adf1ed6f 447 Pfam PF00270 DEAD/DEAH box helicase 25 194 1.5E-41 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 YH65_06105 07b5a5ce4e385ec30bcc0340adf1ed6f 447 SMART SM00487 20 222 1.5E-44 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain YH65_06105 07b5a5ce4e385ec30bcc0340adf1ed6f 447 SMART SM00490 258 339 3.1E-31 T 11-10-2018 IPR001650 Helicase, C-terminal YH65_06105 07b5a5ce4e385ec30bcc0340adf1ed6f 447 Gene3D G3DSA:3.40.50.300 216 446 1.8E-47 T 11-10-2018 YH65_06105 07b5a5ce4e385ec30bcc0340adf1ed6f 447 SUPERFAMILY SSF52540 76 359 6.35E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_06105 07b5a5ce4e385ec30bcc0340adf1ed6f 447 Pfam PF00271 Helicase conserved C-terminal domain 230 339 4.4E-27 T 11-10-2018 IPR001650 Helicase, C-terminal YH65_07155 2db8d8c7c7fe7fcb90a99a89ecfc8c54 258 SUPERFAMILY SSF55315 8 97 3.06E-5 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like YH65_07155 2db8d8c7c7fe7fcb90a99a89ecfc8c54 258 SUPERFAMILY SSF75217 111 255 7.85E-39 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases YH65_07155 2db8d8c7c7fe7fcb90a99a89ecfc8c54 258 Pfam PF00588 SpoU rRNA Methylase family 113 253 5.8E-37 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 YH65_07155 2db8d8c7c7fe7fcb90a99a89ecfc8c54 258 Gene3D G3DSA:3.40.1280.10 100 258 6.5E-44 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YH65_03885 b2a7ac3ca87a6892e9f50a189199b3de 395 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 296 394 4.6E-20 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YH65_03885 b2a7ac3ca87a6892e9f50a189199b3de 395 PRINTS PR00344 Bacterial sensor protein C-terminal signature 328 342 2.9E-5 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YH65_03885 b2a7ac3ca87a6892e9f50a189199b3de 395 PRINTS PR00344 Bacterial sensor protein C-terminal signature 359 377 2.9E-5 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YH65_03885 b2a7ac3ca87a6892e9f50a189199b3de 395 Gene3D G3DSA:1.10.287.130 193 252 5.5E-44 T 11-10-2018 YH65_03885 b2a7ac3ca87a6892e9f50a189199b3de 395 Pfam PF00512 His Kinase A (phospho-acceptor) domain 189 248 2.7E-10 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YH65_03885 b2a7ac3ca87a6892e9f50a189199b3de 395 SUPERFAMILY SSF55874 256 395 9.69E-33 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YH65_03885 b2a7ac3ca87a6892e9f50a189199b3de 395 SMART SM00388 188 253 3.6E-8 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YH65_03885 b2a7ac3ca87a6892e9f50a189199b3de 395 SUPERFAMILY SSF47384 180 248 6.67E-9 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 YH65_03885 b2a7ac3ca87a6892e9f50a189199b3de 395 Gene3D G3DSA:3.30.565.10 253 393 5.5E-44 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YH65_03885 b2a7ac3ca87a6892e9f50a189199b3de 395 SMART SM00387 295 395 9.8E-24 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YH65_03285 12098a142a2d7a3be1c025cbe0dc82c0 168 SUPERFAMILY SSF54534 5 142 5.5E-36 T 11-10-2018 YH65_03285 12098a142a2d7a3be1c025cbe0dc82c0 168 Gene3D G3DSA:2.40.10.330 73 129 3.5E-49 T 11-10-2018 YH65_03285 12098a142a2d7a3be1c025cbe0dc82c0 168 Gene3D G3DSA:3.10.50.40 13 148 3.5E-49 T 11-10-2018 YH65_03285 12098a142a2d7a3be1c025cbe0dc82c0 168 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 137 3.3E-14 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain YH65_04810 fbae14cf6c2cdc514340e028b3151d98 302 Gene3D G3DSA:3.30.450.20 38 139 3.1E-13 T 11-10-2018 YH65_04810 fbae14cf6c2cdc514340e028b3151d98 302 SUPERFAMILY SSF103190 7 149 1.23E-21 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily YH65_10340 f58bf9bd838caafcd7e9b73aef6f3b66 149 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 2 146 12.492 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 YH65_10340 f58bf9bd838caafcd7e9b73aef6f3b66 149 TIGRFAM TIGR00077 lspA: signal peptidase II 3 145 1.1E-29 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 YH65_10340 f58bf9bd838caafcd7e9b73aef6f3b66 149 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 121 137 1.9E-14 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 YH65_10340 f58bf9bd838caafcd7e9b73aef6f3b66 149 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 86 101 1.9E-14 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 YH65_10340 f58bf9bd838caafcd7e9b73aef6f3b66 149 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 43 51 1.9E-14 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 YH65_10340 f58bf9bd838caafcd7e9b73aef6f3b66 149 ProSitePatterns PS00855 Signal peptidases II signature. 89 101 - T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 YH65_10340 f58bf9bd838caafcd7e9b73aef6f3b66 149 Pfam PF01252 Signal peptidase (SPase) II 11 140 2.8E-22 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 YH65_00755 5f282aa2e3923fc32f164ba23b71c520 303 SUPERFAMILY SSF54862 99 292 6.28E-19 T 11-10-2018 YH65_00755 5f282aa2e3923fc32f164ba23b71c520 303 Gene3D G3DSA:3.30.70.20 223 294 6.7E-10 T 11-10-2018 YH65_00755 5f282aa2e3923fc32f164ba23b71c520 303 TIGRFAM TIGR02163 napH_: ferredoxin-type protein, NapH/MauN family 34 296 2.3E-82 T 11-10-2018 IPR011886 Ferredoxin-type protein, NapH/MauN family YH65_00755 5f282aa2e3923fc32f164ba23b71c520 303 Pfam PF12801 4Fe-4S binding domain 188 230 3.5E-7 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YH65_00755 5f282aa2e3923fc32f164ba23b71c520 303 Pfam PF12801 4Fe-4S binding domain 90 136 9.7E-13 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YH65_00755 5f282aa2e3923fc32f164ba23b71c520 303 Pfam PF12838 4Fe-4S dicluster domain 235 292 3.8E-7 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YH65_05385 28ad247fa795c8f91fe6d78e6e7f8e3a 857 Gene3D G3DSA:3.40.50.300 149 341 7.4E-72 T 11-10-2018 YH65_05385 28ad247fa795c8f91fe6d78e6e7f8e3a 857 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 293 305 - T 11-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 YH65_05385 28ad247fa795c8f91fe6d78e6e7f8e3a 857 Gene3D G3DSA:3.40.50.300 552 764 2.4E-87 T 11-10-2018 YH65_05385 28ad247fa795c8f91fe6d78e6e7f8e3a 857 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 315 3.3E-16 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 YH65_05385 28ad247fa795c8f91fe6d78e6e7f8e3a 857 SUPERFAMILY SSF81923 5 155 1.84E-28 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 YH65_05385 28ad247fa795c8f91fe6d78e6e7f8e3a 857 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 633 651 - T 11-10-2018 IPR028299 ClpA/B, conserved site 2 YH65_05385 28ad247fa795c8f91fe6d78e6e7f8e3a 857 SMART SM00382 599 766 1.5E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain YH65_05385 28ad247fa795c8f91fe6d78e6e7f8e3a 857 SMART SM00382 198 343 3.1E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain YH65_05385 28ad247fa795c8f91fe6d78e6e7f8e3a 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 97 145 6.0E-6 T 11-10-2018 IPR004176 Clp, N-terminal YH65_05385 28ad247fa795c8f91fe6d78e6e7f8e3a 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 20 68 2.1E-7 T 11-10-2018 IPR004176 Clp, N-terminal YH65_05385 28ad247fa795c8f91fe6d78e6e7f8e3a 857 SUPERFAMILY SSF52540 158 547 2.92E-97 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_05385 28ad247fa795c8f91fe6d78e6e7f8e3a 857 Pfam PF07724 AAA domain (Cdc48 subfamily) 598 759 7.4E-56 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 YH65_05385 28ad247fa795c8f91fe6d78e6e7f8e3a 857 Gene3D G3DSA:1.10.8.60 765 857 3.4E-25 T 11-10-2018 YH65_05385 28ad247fa795c8f91fe6d78e6e7f8e3a 857 SMART SM01086 765 854 1.3E-34 T 11-10-2018 IPR019489 Clp ATPase, C-terminal YH65_05385 28ad247fa795c8f91fe6d78e6e7f8e3a 857 Gene3D G3DSA:3.40.50.300 342 546 8.5E-66 T 11-10-2018 YH65_05385 28ad247fa795c8f91fe6d78e6e7f8e3a 857 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 765 844 3.1E-24 T 11-10-2018 IPR019489 Clp ATPase, C-terminal YH65_05385 28ad247fa795c8f91fe6d78e6e7f8e3a 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 677 695 3.4E-41 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 YH65_05385 28ad247fa795c8f91fe6d78e6e7f8e3a 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 603 621 3.4E-41 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 YH65_05385 28ad247fa795c8f91fe6d78e6e7f8e3a 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 648 666 3.4E-41 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 YH65_05385 28ad247fa795c8f91fe6d78e6e7f8e3a 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 710 724 3.4E-41 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 YH65_05385 28ad247fa795c8f91fe6d78e6e7f8e3a 857 SUPERFAMILY SSF52540 548 851 1.09E-81 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_05385 28ad247fa795c8f91fe6d78e6e7f8e3a 857 Gene3D G3DSA:1.10.1780.10 3 148 1.0E-22 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 YH65_00925 00bd760079e677357a016f93c829c0dd 462 SUPERFAMILY SSF52540 28 205 1.56E-12 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_00925 00bd760079e677357a016f93c829c0dd 462 Gene3D G3DSA:3.40.50.300 22 317 1.0E-10 T 11-10-2018 YH65_02995 37eee0a082b86e5da9972b658fb67461 343 Pfam PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain 133 341 1.3E-85 T 11-10-2018 IPR022414 ATP:guanido phosphotransferase, catalytic domain GO:0016301|GO:0016772 Reactome: R-HSA-71288 YH65_02995 37eee0a082b86e5da9972b658fb67461 343 Pfam PF02807 ATP:guanido phosphotransferase, N-terminal domain 8 74 2.4E-31 T 11-10-2018 IPR022413 ATP:guanido phosphotransferase, N-terminal GO:0016301|GO:0016772 Reactome: R-HSA-71288 YH65_02995 37eee0a082b86e5da9972b658fb67461 343 Gene3D G3DSA:1.10.135.10 2 83 8.6E-34 T 11-10-2018 IPR036802 ATP:guanido phosphotransferase, N-terminal domain superfamily GO:0016301|GO:0016772 Reactome: R-HSA-71288 YH65_02995 37eee0a082b86e5da9972b658fb67461 343 ProSitePatterns PS00112 Phosphagen kinase active site signature. 257 263 - T 11-10-2018 IPR022415 ATP:guanido phosphotransferase active site GO:0016301|GO:0016772 Reactome: R-HSA-71288 YH65_02995 37eee0a082b86e5da9972b658fb67461 343 SUPERFAMILY SSF48034 3 79 1.02E-31 T 11-10-2018 IPR036802 ATP:guanido phosphotransferase, N-terminal domain superfamily GO:0016301|GO:0016772 Reactome: R-HSA-71288 YH65_02995 37eee0a082b86e5da9972b658fb67461 343 SUPERFAMILY SSF55931 97 342 9.53E-99 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 YH65_02995 37eee0a082b86e5da9972b658fb67461 343 Gene3D G3DSA:3.30.590.10 85 342 3.0E-107 T 11-10-2018 YH65_00090 54197e176d796945d2beb5db278d87e5 365 Gene3D G3DSA:1.20.1250.20 5 182 2.8E-12 T 11-10-2018 YH65_00090 54197e176d796945d2beb5db278d87e5 365 PIRSF PIRSF004925 4 364 1.1E-71 T 11-10-2018 IPR026032 Probable 3-phenylpropionic acid transporter YH65_00090 54197e176d796945d2beb5db278d87e5 365 SUPERFAMILY SSF103473 5 361 1.7E-27 T 11-10-2018 IPR036259 MFS transporter superfamily YH65_00090 54197e176d796945d2beb5db278d87e5 365 Pfam PF12832 MFS_1 like family 6 338 1.1E-37 T 11-10-2018 IPR024989 Major facilitator superfamily associated domain YH65_00090 54197e176d796945d2beb5db278d87e5 365 Gene3D G3DSA:1.20.1250.20 183 364 7.2E-24 T 11-10-2018 YH65_04080 1f7ab06d32932e7341cf33675be71123 856 ProSitePatterns PS01244 Aconitase family signature 2. 756 769 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 YH65_04080 1f7ab06d32932e7341cf33675be71123 856 Pfam PF00330 Aconitase family (aconitate hydratase) 463 813 9.9E-42 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 YH65_04080 1f7ab06d32932e7341cf33675be71123 856 Gene3D G3DSA:3.30.499.10 394 521 4.1E-144 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 YH65_04080 1f7ab06d32932e7341cf33675be71123 856 Pfam PF06434 Aconitate hydratase 2 N-terminus 172 374 1.3E-93 T 11-10-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 YH65_04080 1f7ab06d32932e7341cf33675be71123 856 Gene3D G3DSA:3.40.1060.10 377 673 4.1E-144 T 11-10-2018 IPR015932 Aconitase, domain 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-1268020|Reactome: R-HSA-71403 YH65_04080 1f7ab06d32932e7341cf33675be71123 856 SUPERFAMILY SSF52016 166 364 3.14E-60 T 11-10-2018 YH65_04080 1f7ab06d32932e7341cf33675be71123 856 SUPERFAMILY SSF74778 3 164 2.62E-60 T 11-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 YH65_04080 1f7ab06d32932e7341cf33675be71123 856 SUPERFAMILY SSF53732 370 842 1.96E-138 T 11-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 YH65_04080 1f7ab06d32932e7341cf33675be71123 856 Pfam PF11791 Aconitate B N-terminal domain 6 160 3.7E-61 T 11-10-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 YH65_04080 1f7ab06d32932e7341cf33675be71123 856 PIRSF PIRSF036687 1 855 0.0 T 11-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 YH65_04080 1f7ab06d32932e7341cf33675be71123 856 Gene3D G3DSA:3.30.499.10 675 855 3.8E-56 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 YH65_04080 1f7ab06d32932e7341cf33675be71123 856 Gene3D G3DSA:3.20.19.10 166 353 3.1E-62 T 11-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 YH65_04080 1f7ab06d32932e7341cf33675be71123 856 Gene3D G3DSA:1.25.40.310 3 165 1.3E-58 T 11-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 YH65_04080 1f7ab06d32932e7341cf33675be71123 856 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 4 847 0.0 T 11-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 YH65_06575 0c1ca6967c92f8434752591479b659fd 898 SUPERFAMILY SSF53098 309 488 3.21E-39 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily YH65_06575 0c1ca6967c92f8434752591479b659fd 898 Pfam PF00476 DNA polymerase family A 525 896 6.9E-137 T 11-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YH65_06575 0c1ca6967c92f8434752591479b659fd 898 PRINTS PR00868 DNA-polymerase family A (pol I) signature 725 750 2.6E-66 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YH65_06575 0c1ca6967c92f8434752591479b659fd 898 PRINTS PR00868 DNA-polymerase family A (pol I) signature 652 667 2.6E-66 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YH65_06575 0c1ca6967c92f8434752591479b659fd 898 PRINTS PR00868 DNA-polymerase family A (pol I) signature 784 795 2.6E-66 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YH65_06575 0c1ca6967c92f8434752591479b659fd 898 PRINTS PR00868 DNA-polymerase family A (pol I) signature 704 717 2.6E-66 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YH65_06575 0c1ca6967c92f8434752591479b659fd 898 PRINTS PR00868 DNA-polymerase family A (pol I) signature 815 831 2.6E-66 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YH65_06575 0c1ca6967c92f8434752591479b659fd 898 PRINTS PR00868 DNA-polymerase family A (pol I) signature 762 773 2.6E-66 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YH65_06575 0c1ca6967c92f8434752591479b659fd 898 PRINTS PR00868 DNA-polymerase family A (pol I) signature 629 651 2.6E-66 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YH65_06575 0c1ca6967c92f8434752591479b659fd 898 PRINTS PR00868 DNA-polymerase family A (pol I) signature 674 697 2.6E-66 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YH65_06575 0c1ca6967c92f8434752591479b659fd 898 PRINTS PR00868 DNA-polymerase family A (pol I) signature 845 858 2.6E-66 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YH65_06575 0c1ca6967c92f8434752591479b659fd 898 ProSitePatterns PS00447 DNA polymerase family A signature. 725 744 - T 11-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YH65_06575 0c1ca6967c92f8434752591479b659fd 898 SMART SM00474 308 489 9.2E-26 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 YH65_06575 0c1ca6967c92f8434752591479b659fd 898 Gene3D G3DSA:3.40.50.1010 5 264 1.7E-84 T 11-10-2018 YH65_06575 0c1ca6967c92f8434752591479b659fd 898 SUPERFAMILY SSF88723 2 166 1.52E-46 T 11-10-2018 IPR029060 PIN-like domain superfamily YH65_06575 0c1ca6967c92f8434752591479b659fd 898 SUPERFAMILY SSF47807 166 261 4.19E-27 T 11-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily YH65_06575 0c1ca6967c92f8434752591479b659fd 898 SMART SM00475 1 258 1.4E-93 T 11-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 YH65_06575 0c1ca6967c92f8434752591479b659fd 898 Gene3D G3DSA:1.10.150.20 170 243 1.7E-84 T 11-10-2018 YH65_06575 0c1ca6967c92f8434752591479b659fd 898 TIGRFAM TIGR00593 pola: DNA polymerase I 5 898 9.9E-266 T 11-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YH65_06575 0c1ca6967c92f8434752591479b659fd 898 Gene3D G3DSA:3.30.420.10 309 516 1.3E-55 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 YH65_06575 0c1ca6967c92f8434752591479b659fd 898 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 166 2.5E-45 T 11-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 YH65_06575 0c1ca6967c92f8434752591479b659fd 898 SUPERFAMILY SSF56672 497 898 2.0E-133 T 11-10-2018 YH65_06575 0c1ca6967c92f8434752591479b659fd 898 Gene3D G3DSA:3.30.70.370 638 894 8.8E-95 T 11-10-2018 YH65_06575 0c1ca6967c92f8434752591479b659fd 898 Gene3D G3DSA:1.10.150.20 683 822 8.8E-95 T 11-10-2018 YH65_06575 0c1ca6967c92f8434752591479b659fd 898 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 167 259 3.8E-27 T 11-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 YH65_06575 0c1ca6967c92f8434752591479b659fd 898 SMART SM00482 660 862 1.6E-80 T 11-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YH65_06575 0c1ca6967c92f8434752591479b659fd 898 Gene3D G3DSA:1.20.1060.10 517 632 2.2E-38 T 11-10-2018 YH65_06575 0c1ca6967c92f8434752591479b659fd 898 Pfam PF01612 3'-5' exonuclease 310 489 2.2E-30 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 YH65_06575 0c1ca6967c92f8434752591479b659fd 898 SMART SM00279 169 204 1.7E-13 T 11-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 YH65_05675 87919892cc6209e36e5b18da2a0d4bde 177 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 69 82 - T 11-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 YH65_05675 87919892cc6209e36e5b18da2a0d4bde 177 SMART SM00852 7 153 1.5E-24 T 11-10-2018 IPR001453 MoaB/Mog domain YH65_05675 87919892cc6209e36e5b18da2a0d4bde 177 Gene3D G3DSA:3.40.980.10 1 177 2.5E-61 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily YH65_05675 87919892cc6209e36e5b18da2a0d4bde 177 Pfam PF00994 Probable molybdopterin binding domain 7 150 1.4E-30 T 11-10-2018 IPR001453 MoaB/Mog domain YH65_05675 87919892cc6209e36e5b18da2a0d4bde 177 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 3 147 3.8E-40 T 11-10-2018 IPR001453 MoaB/Mog domain YH65_05675 87919892cc6209e36e5b18da2a0d4bde 177 SUPERFAMILY SSF53218 3 175 1.57E-45 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily YH65_00720 2cea9bab756fa3e24bf4a8ba01fa4fe8 670 Pfam PF07715 TonB-dependent Receptor Plug Domain 44 125 1.3E-5 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain YH65_00720 2cea9bab756fa3e24bf4a8ba01fa4fe8 670 Gene3D G3DSA:2.40.170.20 136 670 3.0E-88 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily YH65_00720 2cea9bab756fa3e24bf4a8ba01fa4fe8 670 SUPERFAMILY SSF56935 46 670 8.24E-91 T 11-10-2018 YH65_00720 2cea9bab756fa3e24bf4a8ba01fa4fe8 670 Pfam PF00593 TonB dependent receptor 199 669 1.4E-40 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel YH65_10665 d3475372b6eb419d1b11df9d6609fda4 72 SMART SM00316 2 72 1.8E-6 T 11-10-2018 IPR022967 RNA-binding domain, S1 YH65_10665 d3475372b6eb419d1b11df9d6609fda4 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 1.8E-35 T 11-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 YH65_10665 d3475372b6eb419d1b11df9d6609fda4 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 1.2E-28 T 11-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 YH65_10665 d3475372b6eb419d1b11df9d6609fda4 72 SUPERFAMILY SSF50249 1 71 5.71E-28 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold YH65_10665 d3475372b6eb419d1b11df9d6609fda4 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 26.635 T 11-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 YH65_10665 d3475372b6eb419d1b11df9d6609fda4 72 Gene3D G3DSA:2.40.50.140 1 72 4.5E-37 T 11-10-2018 YH65_09465 f5afdf2a619f7d941b86d24cd48683e0 364 SMART SM00937 84 194 5.7E-60 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 YH65_09465 f5afdf2a619f7d941b86d24cd48683e0 364 Gene3D G3DSA:1.20.58.410 5 115 1.3E-20 T 11-10-2018 YH65_09465 f5afdf2a619f7d941b86d24cd48683e0 364 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 244 260 - T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 YH65_09465 f5afdf2a619f7d941b86d24cd48683e0 364 SUPERFAMILY SSF75620 29 360 6.93E-131 T 11-10-2018 YH65_09465 f5afdf2a619f7d941b86d24cd48683e0 364 Gene3D G3DSA:3.30.160.20 225 318 2.4E-96 T 11-10-2018 YH65_09465 f5afdf2a619f7d941b86d24cd48683e0 364 Pfam PF03462 PCRF domain 29 219 9.7E-62 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 YH65_09465 f5afdf2a619f7d941b86d24cd48683e0 364 Gene3D G3DSA:3.30.70.1660 129 356 2.4E-96 T 11-10-2018 YH65_09465 f5afdf2a619f7d941b86d24cd48683e0 364 Pfam PF00472 RF-1 domain 227 335 4.8E-42 T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 YH65_09465 f5afdf2a619f7d941b86d24cd48683e0 364 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 3 362 1.9E-162 T 11-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 YH65_09465 f5afdf2a619f7d941b86d24cd48683e0 364 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 2 363 39.483 T 11-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 YH65_02160 af8c5dfd9b16fb0408f5e62e6902d3cf 255 SUPERFAMILY SSF53335 24 250 3.68E-32 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YH65_02160 af8c5dfd9b16fb0408f5e62e6902d3cf 255 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 17 254 31.279 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 YH65_02160 af8c5dfd9b16fb0408f5e62e6902d3cf 255 Gene3D G3DSA:3.40.50.150 32 255 1.1E-48 T 11-10-2018 YH65_02160 af8c5dfd9b16fb0408f5e62e6902d3cf 255 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 37 52 - T 11-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 YH65_02160 af8c5dfd9b16fb0408f5e62e6902d3cf 255 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 26 254 1.9E-68 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 YH65_02160 af8c5dfd9b16fb0408f5e62e6902d3cf 255 Pfam PF01209 ubiE/COQ5 methyltransferase family 21 252 1.0E-47 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 YH65_10870 a645456d764bc4439c15eea153ec675a 357 SUPERFAMILY SSF102114 76 318 1.7E-13 T 11-10-2018 YH65_10870 a645456d764bc4439c15eea153ec675a 357 PIRSF PIRSF006004 2 357 1.4E-131 T 11-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 YH65_10870 a645456d764bc4439c15eea153ec675a 357 Pfam PF13394 4Fe-4S single cluster domain 120 191 1.3E-4 T 11-10-2018 YH65_10870 a645456d764bc4439c15eea153ec675a 357 Pfam PF04055 Radical SAM superfamily 116 278 7.3E-16 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 YH65_10870 a645456d764bc4439c15eea153ec675a 357 SMART SM00729 111 326 0.0058 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 YH65_10870 a645456d764bc4439c15eea153ec675a 357 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 4 355 4.9E-135 T 11-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 YH65_10870 a645456d764bc4439c15eea153ec675a 357 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 3 354 68.254 T 11-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 YH65_10870 a645456d764bc4439c15eea153ec675a 357 Gene3D G3DSA:3.20.20.70 62 338 2.7E-96 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YH65_10870 a645456d764bc4439c15eea153ec675a 357 Gene3D G3DSA:1.10.150.530 3 59 2.0E-14 T 11-10-2018 YH65_02760 a6745f009bb988ebb781b3df63c89618 217 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 214 1.2E-16 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YH65_02760 a6745f009bb988ebb781b3df63c89618 217 SMART SM00448 1 112 4.5E-37 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YH65_02760 a6745f009bb988ebb781b3df63c89618 217 Gene3D G3DSA:3.40.50.2300 1 123 1.4E-35 T 11-10-2018 YH65_02760 a6745f009bb988ebb781b3df63c89618 217 SUPERFAMILY SSF52172 1 161 4.41E-37 T 11-10-2018 IPR011006 CheY-like superfamily YH65_02760 a6745f009bb988ebb781b3df63c89618 217 Pfam PF00072 Response regulator receiver domain 3 113 3.0E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YH65_02760 a6745f009bb988ebb781b3df63c89618 217 SMART SM00862 142 214 1.7E-16 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YH65_02760 a6745f009bb988ebb781b3df63c89618 217 Gene3D G3DSA:1.10.10.10 124 216 1.5E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YH65_07420 0ee55da7ca6078db2268196435c4b32b 1471 SUPERFAMILY SSF56235 12 426 1.29E-125 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal YH65_07420 0ee55da7ca6078db2268196435c4b32b 1471 Gene3D G3DSA:3.20.20.70 478 1172 0.0 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YH65_07420 0ee55da7ca6078db2268196435c4b32b 1471 Pfam PF01493 GXGXG motif 1233 1414 1.1E-71 T 11-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 YH65_07420 0ee55da7ca6078db2268196435c4b32b 1471 Pfam PF01645 Conserved region in glutamate synthase 801 1158 3.6E-147 T 11-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 YH65_07420 0ee55da7ca6078db2268196435c4b32b 1471 Pfam PF00310 Glutamine amidotransferases class-II 12 422 4.5E-145 T 11-10-2018 IPR017932 Glutamine amidotransferase type 2 domain YH65_07420 0ee55da7ca6078db2268196435c4b32b 1471 Gene3D G3DSA:3.20.20.70 427 794 0.0 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YH65_07420 0ee55da7ca6078db2268196435c4b32b 1471 Pfam PF04898 Glutamate synthase central domain 452 734 1.5E-87 T 11-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 YH65_07420 0ee55da7ca6078db2268196435c4b32b 1471 Gene3D G3DSA:2.160.20.60 1195 1462 2.9E-93 T 11-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 YH65_07420 0ee55da7ca6078db2268196435c4b32b 1471 SUPERFAMILY SSF51395 434 1182 7.79E-220 T 11-10-2018 YH65_07420 0ee55da7ca6078db2268196435c4b32b 1471 Gene3D G3DSA:3.60.20.10 12 540 0.0 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal YH65_07420 0ee55da7ca6078db2268196435c4b32b 1471 SUPERFAMILY SSF69336 1209 1465 2.35E-82 T 11-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 YH65_06420 fedeb173a2316a511fc7ffa2c9412022 120 Gene3D G3DSA:1.20.1290.10 2 120 4.5E-14 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 YH65_06420 fedeb173a2316a511fc7ffa2c9412022 120 SUPERFAMILY SSF69118 4 116 1.96E-17 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 YH65_06420 fedeb173a2316a511fc7ffa2c9412022 120 Pfam PF02627 Carboxymuconolactone decarboxylase family 50 115 3.4E-9 T 11-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 YH65_09945 d7b0af73c7b88a1d9455c5f14c520142 66 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 66 28.287 T 11-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 YH65_09945 d7b0af73c7b88a1d9455c5f14c520142 66 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 65 1.3E-31 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YH65_09945 d7b0af73c7b88a1d9455c5f14c520142 66 SUPERFAMILY SSF143800 1 65 3.92E-25 T 11-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_09945 d7b0af73c7b88a1d9455c5f14c520142 66 PRINTS PR01249 Ribosomal protein L31 signature 2 19 2.6E-21 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YH65_09945 d7b0af73c7b88a1d9455c5f14c520142 66 PRINTS PR01249 Ribosomal protein L31 signature 45 63 2.6E-21 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YH65_09945 d7b0af73c7b88a1d9455c5f14c520142 66 PRINTS PR01249 Ribosomal protein L31 signature 30 45 2.6E-21 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YH65_09945 d7b0af73c7b88a1d9455c5f14c520142 66 Gene3D G3DSA:2.30.170.50 1 66 4.2E-30 T 11-10-2018 YH65_09945 d7b0af73c7b88a1d9455c5f14c520142 66 ProSitePatterns PS01143 Ribosomal protein L31 signature. 34 55 - T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YH65_09945 d7b0af73c7b88a1d9455c5f14c520142 66 Pfam PF01197 Ribosomal protein L31 1 64 3.4E-31 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YH65_03275 acc444a52292c3d6659028502f4761f2 252 Gene3D G3DSA:1.10.3730.10 153 252 9.4E-31 T 11-10-2018 YH65_03275 acc444a52292c3d6659028502f4761f2 252 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 150 252 2.6E-33 T 11-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 YH65_03275 acc444a52292c3d6659028502f4761f2 252 SUPERFAMILY SSF51735 3 147 4.41E-19 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily YH65_03275 acc444a52292c3d6659028502f4761f2 252 PIRSF PIRSF000193 1 252 5.3E-60 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 YH65_03275 acc444a52292c3d6659028502f4761f2 252 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 3 91 5.8E-7 T 11-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal YH65_03275 acc444a52292c3d6659028502f4761f2 252 Gene3D G3DSA:3.40.50.720 1 152 2.0E-28 T 11-10-2018 YH65_03275 acc444a52292c3d6659028502f4761f2 252 SUPERFAMILY SSF48179 150 252 1.34E-28 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 YH65_03275 acc444a52292c3d6659028502f4761f2 252 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 2 252 23.655 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 YH65_03275 acc444a52292c3d6659028502f4761f2 252 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 4 252 9.3E-70 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 YH65_07435 2b97db4374d0b67ffd3f08fba0d955d9 162 Gene3D G3DSA:3.40.30.10 26 159 4.5E-27 T 11-10-2018 YH65_07435 2b97db4374d0b67ffd3f08fba0d955d9 162 SUPERFAMILY SSF52833 5 156 3.83E-28 T 11-10-2018 IPR036249 Thioredoxin-like superfamily YH65_07435 2b97db4374d0b67ffd3f08fba0d955d9 162 ProSitePatterns PS00194 Thioredoxin family active site. 59 77 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 YH65_07435 2b97db4374d0b67ffd3f08fba0d955d9 162 Pfam PF00578 AhpC/TSA family 50 143 7.0E-17 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 YH65_01435 506238adea3dd3e219b2bf9a949f35dc 476 Pfam PF13439 Glycosyltransferase Family 4 130 283 8.2E-8 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 YH65_01435 506238adea3dd3e219b2bf9a949f35dc 476 Pfam PF00534 Glycosyl transferases group 1 294 449 1.1E-7 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 YH65_01435 506238adea3dd3e219b2bf9a949f35dc 476 SUPERFAMILY SSF53756 118 474 4.71E-42 T 11-10-2018 YH65_01435 506238adea3dd3e219b2bf9a949f35dc 476 Gene3D G3DSA:3.40.50.2000 117 292 2.6E-8 T 11-10-2018 YH65_01435 506238adea3dd3e219b2bf9a949f35dc 476 Gene3D G3DSA:3.40.50.2000 293 475 6.3E-23 T 11-10-2018 YH65_05960 03ceff789f1862256b844bbae9478344 467 SMART SM00849 14 251 1.9E-13 T 11-10-2018 IPR001279 Metallo-beta-lactamase YH65_05960 03ceff789f1862256b844bbae9478344 467 Gene3D G3DSA:3.60.15.10 7 442 9.8E-144 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like YH65_05960 03ceff789f1862256b844bbae9478344 467 SMART SM01027 256 382 6.2E-61 T 11-10-2018 IPR022712 Beta-Casp domain YH65_05960 03ceff789f1862256b844bbae9478344 467 SUPERFAMILY SSF56281 4 466 2.3E-120 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like YH65_05960 03ceff789f1862256b844bbae9478344 467 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 396 457 1.8E-13 T 11-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain YH65_05960 03ceff789f1862256b844bbae9478344 467 Pfam PF10996 Beta-Casp domain 256 382 8.2E-31 T 11-10-2018 IPR022712 Beta-Casp domain YH65_05960 03ceff789f1862256b844bbae9478344 467 Pfam PF00753 Metallo-beta-lactamase superfamily 12 112 1.2E-13 T 11-10-2018 IPR001279 Metallo-beta-lactamase YH65_05960 03ceff789f1862256b844bbae9478344 467 Gene3D G3DSA:3.40.50.10890 224 408 9.8E-144 T 11-10-2018 YH65_02950 46a487681290b568a00bc92e993426db 516 SMART SM00849 26 213 6.5E-14 T 11-10-2018 IPR001279 Metallo-beta-lactamase YH65_02950 46a487681290b568a00bc92e993426db 516 Gene3D G3DSA:1.10.287.130 266 351 5.8E-14 T 11-10-2018 YH65_02950 46a487681290b568a00bc92e993426db 516 PRINTS PR00344 Bacterial sensor protein C-terminal signature 451 461 5.0E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YH65_02950 46a487681290b568a00bc92e993426db 516 PRINTS PR00344 Bacterial sensor protein C-terminal signature 464 482 5.0E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YH65_02950 46a487681290b568a00bc92e993426db 516 PRINTS PR00344 Bacterial sensor protein C-terminal signature 433 447 5.0E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YH65_02950 46a487681290b568a00bc92e993426db 516 PRINTS PR00344 Bacterial sensor protein C-terminal signature 488 501 5.0E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YH65_02950 46a487681290b568a00bc92e993426db 516 SMART SM00387 392 504 1.2E-14 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YH65_02950 46a487681290b568a00bc92e993426db 516 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 397 502 1.9E-14 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YH65_02950 46a487681290b568a00bc92e993426db 516 SUPERFAMILY SSF55874 355 502 1.64E-26 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YH65_02950 46a487681290b568a00bc92e993426db 516 SUPERFAMILY SSF47384 277 348 1.06E-8 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 YH65_02950 46a487681290b568a00bc92e993426db 516 SUPERFAMILY SSF56281 6 226 2.52E-27 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like YH65_02950 46a487681290b568a00bc92e993426db 516 Gene3D G3DSA:3.30.565.10 354 506 1.5E-30 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YH65_02950 46a487681290b568a00bc92e993426db 516 SMART SM00388 282 352 0.0046 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YH65_02950 46a487681290b568a00bc92e993426db 516 Pfam PF00753 Metallo-beta-lactamase superfamily 24 213 3.4E-8 T 11-10-2018 IPR001279 Metallo-beta-lactamase YH65_02950 46a487681290b568a00bc92e993426db 516 Gene3D G3DSA:3.60.15.10 4 232 5.9E-50 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like YH65_03050 f22453796e03d181f373db954e521da8 430 PRINTS PR00083 Histidinol dehydrogenase signature 252 271 4.3E-80 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 YH65_03050 f22453796e03d181f373db954e521da8 430 PRINTS PR00083 Histidinol dehydrogenase signature 321 346 4.3E-80 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 YH65_03050 f22453796e03d181f373db954e521da8 430 PRINTS PR00083 Histidinol dehydrogenase signature 137 163 4.3E-80 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 YH65_03050 f22453796e03d181f373db954e521da8 430 PRINTS PR00083 Histidinol dehydrogenase signature 362 380 4.3E-80 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 YH65_03050 f22453796e03d181f373db954e521da8 430 PRINTS PR00083 Histidinol dehydrogenase signature 171 197 4.3E-80 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 YH65_03050 f22453796e03d181f373db954e521da8 430 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 4.3E-80 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 YH65_03050 f22453796e03d181f373db954e521da8 430 PRINTS PR00083 Histidinol dehydrogenase signature 201 226 4.3E-80 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 YH65_03050 f22453796e03d181f373db954e521da8 430 PRINTS PR00083 Histidinol dehydrogenase signature 230 251 4.3E-80 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 YH65_03050 f22453796e03d181f373db954e521da8 430 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 427 1.1E-162 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 YH65_03050 f22453796e03d181f373db954e521da8 430 SUPERFAMILY SSF53720 35 428 6.47E-78 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 YH65_03050 f22453796e03d181f373db954e521da8 430 PIRSF PIRSF000099 3 430 8.1E-169 T 11-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 YH65_03050 f22453796e03d181f373db954e521da8 430 Pfam PF00815 Histidinol dehydrogenase 20 428 2.6E-168 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 YH65_03050 f22453796e03d181f373db954e521da8 430 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 5 428 40.311 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 YH65_03050 f22453796e03d181f373db954e521da8 430 Gene3D G3DSA:3.40.50.1980 234 350 7.7E-124 T 11-10-2018 YH65_03050 f22453796e03d181f373db954e521da8 430 Gene3D G3DSA:3.40.50.1980 33 232 7.7E-124 T 11-10-2018 YH65_04505 0cd25edd57c7e67d864e53e0ee3d197c 352 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 4 334 3.3E-73 T 11-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 YH65_04505 0cd25edd57c7e67d864e53e0ee3d197c 352 SUPERFAMILY SSF53756 76 266 3.14E-6 T 11-10-2018 YH65_04505 0cd25edd57c7e67d864e53e0ee3d197c 352 Pfam PF02684 Lipid-A-disaccharide synthetase 4 329 7.9E-76 T 11-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 YH65_01845 f5ad4e6490c7e44f8f6c2305c6b029ce 729 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 581 595 2.9E-38 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 YH65_01845 f5ad4e6490c7e44f8f6c2305c6b029ce 729 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 477 495 2.9E-38 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 YH65_01845 f5ad4e6490c7e44f8f6c2305c6b029ce 729 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 519 537 2.9E-38 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 YH65_01845 f5ad4e6490c7e44f8f6c2305c6b029ce 729 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 548 566 2.9E-38 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 YH65_01845 f5ad4e6490c7e44f8f6c2305c6b029ce 729 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 290 302 - T 11-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 YH65_01845 f5ad4e6490c7e44f8f6c2305c6b029ce 729 Gene3D G3DSA:1.10.8.60 339 424 1.7E-27 T 11-10-2018 YH65_01845 f5ad4e6490c7e44f8f6c2305c6b029ce 729 Pfam PF07724 AAA domain (Cdc48 subfamily) 472 629 4.6E-46 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 YH65_01845 f5ad4e6490c7e44f8f6c2305c6b029ce 729 SUPERFAMILY SSF52540 423 722 1.85E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_01845 f5ad4e6490c7e44f8f6c2305c6b029ce 729 Gene3D G3DSA:3.40.50.300 143 338 3.2E-67 T 11-10-2018 YH65_01845 f5ad4e6490c7e44f8f6c2305c6b029ce 729 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 636 716 9.5E-21 T 11-10-2018 IPR019489 Clp ATPase, C-terminal YH65_01845 f5ad4e6490c7e44f8f6c2305c6b029ce 729 Gene3D G3DSA:1.10.8.60 636 729 9.1E-26 T 11-10-2018 YH65_01845 f5ad4e6490c7e44f8f6c2305c6b029ce 729 SUPERFAMILY SSF81923 1 138 1.57E-35 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 YH65_01845 f5ad4e6490c7e44f8f6c2305c6b029ce 729 Gene3D G3DSA:1.10.1780.10 1 139 4.2E-25 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 YH65_01845 f5ad4e6490c7e44f8f6c2305c6b029ce 729 SMART SM00382 473 637 1.2E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain YH65_01845 f5ad4e6490c7e44f8f6c2305c6b029ce 729 SMART SM00382 194 339 9.3E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain YH65_01845 f5ad4e6490c7e44f8f6c2305c6b029ce 729 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 504 522 - T 11-10-2018 IPR028299 ClpA/B, conserved site 2 YH65_01845 f5ad4e6490c7e44f8f6c2305c6b029ce 729 SUPERFAMILY SSF52540 157 408 1.12E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_01845 f5ad4e6490c7e44f8f6c2305c6b029ce 729 Gene3D G3DSA:3.40.50.300 426 635 1.5E-74 T 11-10-2018 YH65_01845 f5ad4e6490c7e44f8f6c2305c6b029ce 729 SMART SM01086 636 725 5.6E-28 T 11-10-2018 IPR019489 Clp ATPase, C-terminal YH65_01845 f5ad4e6490c7e44f8f6c2305c6b029ce 729 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 61 2.1E-6 T 11-10-2018 IPR004176 Clp, N-terminal YH65_01845 f5ad4e6490c7e44f8f6c2305c6b029ce 729 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 199 315 1.4E-13 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 YH65_01845 f5ad4e6490c7e44f8f6c2305c6b029ce 729 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 5 717 0.0 T 11-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 YH65_08810 ea3f6d8ec698d741b313aadaa1274ee8 547 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 5 498 3.2E-200 T 11-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 YH65_08810 ea3f6d8ec698d741b313aadaa1274ee8 547 SUPERFAMILY SSF55681 156 496 1.25E-112 T 11-10-2018 YH65_08810 ea3f6d8ec698d741b313aadaa1274ee8 547 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 10 498 42.256 T 11-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 YH65_08810 ea3f6d8ec698d741b313aadaa1274ee8 547 Gene3D G3DSA:3.30.930.10 152 518 2.1E-126 T 11-10-2018 YH65_08810 ea3f6d8ec698d741b313aadaa1274ee8 547 PRINTS PR00982 Lysyl-tRNA synthetase signature 209 225 4.8E-36 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 YH65_08810 ea3f6d8ec698d741b313aadaa1274ee8 547 PRINTS PR00982 Lysyl-tRNA synthetase signature 379 395 4.8E-36 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 YH65_08810 ea3f6d8ec698d741b313aadaa1274ee8 547 PRINTS PR00982 Lysyl-tRNA synthetase signature 256 273 4.8E-36 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 YH65_08810 ea3f6d8ec698d741b313aadaa1274ee8 547 PRINTS PR00982 Lysyl-tRNA synthetase signature 238 251 4.8E-36 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 YH65_08810 ea3f6d8ec698d741b313aadaa1274ee8 547 PRINTS PR00982 Lysyl-tRNA synthetase signature 193 203 4.8E-36 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 YH65_08810 ea3f6d8ec698d741b313aadaa1274ee8 547 Gene3D G3DSA:2.40.50.140 2 151 1.9E-37 T 11-10-2018 YH65_08810 ea3f6d8ec698d741b313aadaa1274ee8 547 SUPERFAMILY SSF50249 5 149 3.18E-34 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold YH65_08810 ea3f6d8ec698d741b313aadaa1274ee8 547 Pfam PF00152 tRNA synthetases class II (D, K and N) 156 495 2.4E-78 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 YH65_08810 ea3f6d8ec698d741b313aadaa1274ee8 547 Pfam PF01336 OB-fold nucleic acid binding domain 61 139 4.4E-12 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 YH65_01310 6c335c9e82f701555890ae7f4cca9890 243 Gene3D G3DSA:3.10.20.30 1 91 1.3E-22 T 11-10-2018 IPR012675 Beta-grasp domain superfamily YH65_01310 6c335c9e82f701555890ae7f4cca9890 243 SUPERFAMILY SSF54292 21 91 8.04E-17 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 YH65_01310 6c335c9e82f701555890ae7f4cca9890 243 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 183 194 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YH65_01310 6c335c9e82f701555890ae7f4cca9890 243 Gene3D G3DSA:1.10.1060.10 92 217 1.9E-32 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 YH65_01310 6c335c9e82f701555890ae7f4cca9890 243 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 9 94 3.6E-21 T 11-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 YH65_01310 6c335c9e82f701555890ae7f4cca9890 243 SUPERFAMILY SSF46548 102 212 9.07E-27 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 YH65_01310 6c335c9e82f701555890ae7f4cca9890 243 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 9 207 7.0E-55 T 11-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 YH65_01310 6c335c9e82f701555890ae7f4cca9890 243 Pfam PF13183 4Fe-4S dicluster domain 126 197 6.4E-13 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YH65_07955 4557afda4077b2887d7285b6524a43c6 307 SUPERFAMILY SSF53335 4 300 7.56E-33 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YH65_07955 4557afda4077b2887d7285b6524a43c6 307 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 4 302 2.5E-93 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 YH65_07955 4557afda4077b2887d7285b6524a43c6 307 Pfam PF01795 MraW methylase family 3 302 2.2E-100 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 YH65_07955 4557afda4077b2887d7285b6524a43c6 307 PIRSF PIRSF004486 1 305 2.1E-94 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 YH65_07955 4557afda4077b2887d7285b6524a43c6 307 Gene3D G3DSA:3.40.50.150 5 300 1.3E-82 T 11-10-2018 YH65_07955 4557afda4077b2887d7285b6524a43c6 307 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 5 304 32.528 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 YH65_07955 4557afda4077b2887d7285b6524a43c6 307 SUPERFAMILY SSF81799 110 207 9.81E-28 T 11-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 YH65_07955 4557afda4077b2887d7285b6524a43c6 307 Gene3D G3DSA:1.10.150.170 108 209 1.3E-82 T 11-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 YH65_07150 8863b7210a852a65d4c6de28e8fc9532 292 Gene3D G3DSA:2.60.260.20 128 194 9.7E-17 T 11-10-2018 YH65_07150 8863b7210a852a65d4c6de28e8fc9532 292 SUPERFAMILY SSF49493 132 197 2.22E-11 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 YH65_07150 8863b7210a852a65d4c6de28e8fc9532 292 SUPERFAMILY SSF49493 201 277 8.63E-19 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 YH65_07150 8863b7210a852a65d4c6de28e8fc9532 292 PRINTS PR00625 DnaJ domain signature 6 24 5.7E-28 T 11-10-2018 IPR001623 DnaJ domain YH65_07150 8863b7210a852a65d4c6de28e8fc9532 292 PRINTS PR00625 DnaJ domain signature 24 39 5.7E-28 T 11-10-2018 IPR001623 DnaJ domain YH65_07150 8863b7210a852a65d4c6de28e8fc9532 292 PRINTS PR00625 DnaJ domain signature 40 60 5.7E-28 T 11-10-2018 IPR001623 DnaJ domain YH65_07150 8863b7210a852a65d4c6de28e8fc9532 292 PRINTS PR00625 DnaJ domain signature 60 79 5.7E-28 T 11-10-2018 IPR001623 DnaJ domain YH65_07150 8863b7210a852a65d4c6de28e8fc9532 292 Pfam PF01556 DnaJ C terminal domain 135 275 1.0E-35 T 11-10-2018 IPR002939 Chaperone DnaJ, C-terminal YH65_07150 8863b7210a852a65d4c6de28e8fc9532 292 SUPERFAMILY SSF46565 3 112 9.16E-32 T 11-10-2018 IPR036869 Chaperone J-domain superfamily YH65_07150 8863b7210a852a65d4c6de28e8fc9532 292 ProSitePatterns PS00636 Nt-dnaJ domain signature. 45 64 - T 11-10-2018 IPR018253 DnaJ domain, conserved site YH65_07150 8863b7210a852a65d4c6de28e8fc9532 292 SMART SM00271 3 60 6.9E-30 T 11-10-2018 IPR001623 DnaJ domain YH65_07150 8863b7210a852a65d4c6de28e8fc9532 292 Gene3D G3DSA:2.60.260.20 197 292 2.0E-23 T 11-10-2018 YH65_07150 8863b7210a852a65d4c6de28e8fc9532 292 Pfam PF00226 DnaJ domain 5 65 1.3E-26 T 11-10-2018 IPR001623 DnaJ domain YH65_07150 8863b7210a852a65d4c6de28e8fc9532 292 Gene3D G3DSA:1.10.287.110 1 110 1.4E-35 T 11-10-2018 IPR036869 Chaperone J-domain superfamily YH65_10125 a0a994b5cfcabc1a49c60d3c18e28af5 911 SUPERFAMILY SSF52540 5 704 1.01E-75 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_10125 a0a994b5cfcabc1a49c60d3c18e28af5 911 Pfam PF01930 Domain of unknown function DUF83 836 910 7.3E-6 T 11-10-2018 IPR022765 Dna2/Cas4, domain of unknown function DUF83 YH65_10125 a0a994b5cfcabc1a49c60d3c18e28af5 911 Pfam PF13361 UvrD-like helicase C-terminal domain 406 513 4.4E-6 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 YH65_10125 a0a994b5cfcabc1a49c60d3c18e28af5 911 SUPERFAMILY SSF52980 762 897 1.72E-6 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 YH65_10125 a0a994b5cfcabc1a49c60d3c18e28af5 911 Gene3D G3DSA:3.40.50.300 406 517 8.7E-8 T 11-10-2018 YH65_10125 a0a994b5cfcabc1a49c60d3c18e28af5 911 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 398 3.5E-42 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 YH65_10125 a0a994b5cfcabc1a49c60d3c18e28af5 911 Gene3D G3DSA:3.40.50.300 571 714 3.0E-16 T 11-10-2018 YH65_10125 a0a994b5cfcabc1a49c60d3c18e28af5 911 Gene3D G3DSA:3.40.50.300 184 402 2.7E-23 T 11-10-2018 YH65_10125 a0a994b5cfcabc1a49c60d3c18e28af5 911 Gene3D G3DSA:3.90.320.10 724 907 7.3E-6 T 11-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal YH65_10125 a0a994b5cfcabc1a49c60d3c18e28af5 911 Pfam PF13361 UvrD-like helicase C-terminal domain 609 702 1.1E-10 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 YH65_05180 c2cdb60b8be954b226bd9791f6111cd2 284 PRINTS PR01958 Sedoheptulose-1,7-bisphosphatase family signature 37 52 1.2E-14 T 11-10-2018 IPR023079 Sedoheptulose-1,7-bisphosphatase GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 YH65_05180 c2cdb60b8be954b226bd9791f6111cd2 284 PRINTS PR01958 Sedoheptulose-1,7-bisphosphatase family signature 189 209 1.2E-14 T 11-10-2018 IPR023079 Sedoheptulose-1,7-bisphosphatase GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 YH65_05180 c2cdb60b8be954b226bd9791f6111cd2 284 PRINTS PR01958 Sedoheptulose-1,7-bisphosphatase family signature 107 125 1.2E-14 T 11-10-2018 IPR023079 Sedoheptulose-1,7-bisphosphatase GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 YH65_05180 c2cdb60b8be954b226bd9791f6111cd2 284 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 4 132 4.7E-31 T 11-10-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 YH65_05180 c2cdb60b8be954b226bd9791f6111cd2 284 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 2 282 30.01 T 11-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 YH65_05180 c2cdb60b8be954b226bd9791f6111cd2 284 PIRSF PIRSF000904 1 284 1.4E-86 T 11-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 YH65_05180 c2cdb60b8be954b226bd9791f6111cd2 284 SUPERFAMILY SSF56655 5 279 1.0E-69 T 11-10-2018 YH65_05180 c2cdb60b8be954b226bd9791f6111cd2 284 Gene3D G3DSA:3.30.540.10 1 143 3.2E-37 T 11-10-2018 YH65_05180 c2cdb60b8be954b226bd9791f6111cd2 284 PIRSF PIRSF500210 1 284 1.4E-86 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 YH65_05180 c2cdb60b8be954b226bd9791f6111cd2 284 Gene3D G3DSA:3.40.190.80 154 284 2.4E-39 T 11-10-2018 YH65_07745 d298181d9c837e1018dc9365ae0fc90c 382 SUPERFAMILY SSF55874 244 382 4.58E-31 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YH65_07745 d298181d9c837e1018dc9365ae0fc90c 382 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 285 381 1.2E-18 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YH65_07745 d298181d9c837e1018dc9365ae0fc90c 382 SUPERFAMILY SSF47384 169 232 1.06E-6 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 YH65_07745 d298181d9c837e1018dc9365ae0fc90c 382 Gene3D G3DSA:1.10.287.130 157 236 7.3E-6 T 11-10-2018 YH65_07745 d298181d9c837e1018dc9365ae0fc90c 382 Gene3D G3DSA:3.30.565.10 237 382 9.7E-33 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YH65_07745 d298181d9c837e1018dc9365ae0fc90c 382 SMART SM00387 281 382 7.3E-24 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YH65_07745 d298181d9c837e1018dc9365ae0fc90c 382 PRINTS PR00344 Bacterial sensor protein C-terminal signature 314 328 5.1E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YH65_07745 d298181d9c837e1018dc9365ae0fc90c 382 PRINTS PR00344 Bacterial sensor protein C-terminal signature 345 363 5.1E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YH65_07745 d298181d9c837e1018dc9365ae0fc90c 382 PRINTS PR00344 Bacterial sensor protein C-terminal signature 332 342 5.1E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YH65_07745 d298181d9c837e1018dc9365ae0fc90c 382 PRINTS PR00344 Bacterial sensor protein C-terminal signature 369 382 5.1E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YH65_06560 3e247d0ba7f855120440645bfa201024 116 Gene3D G3DSA:3.30.300.130 1 85 2.2E-19 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily YH65_06560 3e247d0ba7f855120440645bfa201024 116 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 27 79 5.0E-9 T 11-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 YH65_06560 3e247d0ba7f855120440645bfa201024 116 Pfam PF01106 NifU-like domain 13 76 2.1E-18 T 11-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 YH65_06560 3e247d0ba7f855120440645bfa201024 116 SUPERFAMILY SSF117916 2 84 2.78E-22 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily YH65_10160 8ecf2517e5c6e174fcf73287cfa6c819 229 SUPERFAMILY SSF46626 17 221 1.28E-21 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_10160 8ecf2517e5c6e174fcf73287cfa6c819 229 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 3 227 2.6E-86 T 11-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO YH65_10160 8ecf2517e5c6e174fcf73287cfa6c819 229 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 3 222 1.6E-84 T 11-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO YH65_10160 8ecf2517e5c6e174fcf73287cfa6c819 229 Gene3D G3DSA:1.10.760.10 37 227 2.4E-49 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_03640 cdc5d56327d4b861eb59ba2f713d6619 113 PRINTS PR00340 P-II protein signature 23 41 3.7E-38 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YH65_03640 cdc5d56327d4b861eb59ba2f713d6619 113 PRINTS PR00340 P-II protein signature 2 17 3.7E-38 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YH65_03640 cdc5d56327d4b861eb59ba2f713d6619 113 PRINTS PR00340 P-II protein signature 84 104 3.7E-38 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YH65_03640 cdc5d56327d4b861eb59ba2f713d6619 113 PRINTS PR00340 P-II protein signature 52 75 3.7E-38 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YH65_03640 cdc5d56327d4b861eb59ba2f713d6619 113 PIRSF PIRSF039144 1 113 1.8E-52 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YH65_03640 cdc5d56327d4b861eb59ba2f713d6619 113 Pfam PF00543 Nitrogen regulatory protein P-II 4 106 1.1E-39 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YH65_03640 cdc5d56327d4b861eb59ba2f713d6619 113 ProSitePatterns PS00638 P-II protein C-terminal region signature. 84 97 - T 11-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 YH65_03640 cdc5d56327d4b861eb59ba2f713d6619 113 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 11-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 YH65_03640 cdc5d56327d4b861eb59ba2f713d6619 113 SUPERFAMILY SSF54913 1 113 6.35E-42 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta YH65_03640 cdc5d56327d4b861eb59ba2f713d6619 113 Gene3D G3DSA:3.30.70.120 1 113 8.9E-44 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal YH65_03640 cdc5d56327d4b861eb59ba2f713d6619 113 SMART SM00938 4 106 3.3E-59 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YH65_01090 16b35975969d61fd2f209c7b62a14e83 399 Pfam PF00994 Probable molybdopterin binding domain 174 312 7.4E-22 T 11-10-2018 IPR001453 MoaB/Mog domain YH65_01090 16b35975969d61fd2f209c7b62a14e83 399 SUPERFAMILY SSF63882 1 170 5.36E-42 T 11-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 YH65_01090 16b35975969d61fd2f209c7b62a14e83 399 Gene3D G3DSA:2.170.190.11 45 135 8.8E-102 T 11-10-2018 YH65_01090 16b35975969d61fd2f209c7b62a14e83 399 Gene3D G3DSA:3.90.105.10 21 168 8.8E-102 T 11-10-2018 YH65_01090 16b35975969d61fd2f209c7b62a14e83 399 Gene3D G3DSA:3.40.980.10 169 321 8.8E-102 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily YH65_01090 16b35975969d61fd2f209c7b62a14e83 399 SMART SM00852 174 313 8.2E-34 T 11-10-2018 IPR001453 MoaB/Mog domain YH65_01090 16b35975969d61fd2f209c7b62a14e83 399 SUPERFAMILY SSF53218 170 315 1.31E-32 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily YH65_01090 16b35975969d61fd2f209c7b62a14e83 399 Gene3D G3DSA:2.40.340.10 322 393 8.8E-102 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 YH65_01090 16b35975969d61fd2f209c7b62a14e83 399 Pfam PF03453 MoeA N-terminal region (domain I and II) 20 159 3.9E-32 T 11-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 YH65_01090 16b35975969d61fd2f209c7b62a14e83 399 SUPERFAMILY SSF63867 322 398 2.94E-6 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 YH65_00295 e944dab11babd16745c12d4dde0fd1ee 228 Pfam PF00072 Response regulator receiver domain 8 117 8.7E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YH65_00295 e944dab11babd16745c12d4dde0fd1ee 228 Gene3D G3DSA:3.40.50.2300 1 126 2.0E-29 T 11-10-2018 YH65_00295 e944dab11babd16745c12d4dde0fd1ee 228 Gene3D G3DSA:1.10.10.10 127 228 8.1E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YH65_00295 e944dab11babd16745c12d4dde0fd1ee 228 SUPERFAMILY SSF52172 5 180 3.7E-33 T 11-10-2018 IPR011006 CheY-like superfamily YH65_00295 e944dab11babd16745c12d4dde0fd1ee 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 227 8.9E-16 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YH65_00295 e944dab11babd16745c12d4dde0fd1ee 228 SMART SM00448 6 117 1.4E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YH65_00295 e944dab11babd16745c12d4dde0fd1ee 228 SMART SM00862 151 227 2.1E-16 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YH65_05390 c94c5e2a7d1f2b7fdc2c11aef2eb9024 202 Gene3D G3DSA:3.40.225.10 25 201 1.1E-22 T 11-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily YH65_05390 c94c5e2a7d1f2b7fdc2c11aef2eb9024 202 SUPERFAMILY SSF53639 27 197 9.61E-20 T 11-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily YH65_05390 c94c5e2a7d1f2b7fdc2c11aef2eb9024 202 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 46 197 6.8E-13 T 11-10-2018 IPR001303 Class II aldolase/adducin N-terminal YH65_05390 c94c5e2a7d1f2b7fdc2c11aef2eb9024 202 SMART SM01007 24 201 1.1E-4 T 11-10-2018 IPR001303 Class II aldolase/adducin N-terminal YH65_02475 0dba4bcb57084bc3de25898c0fe6fce2 156 Gene3D G3DSA:3.40.50.960 1 155 7.9E-55 T 11-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 YH65_02475 0dba4bcb57084bc3de25898c0fe6fce2 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 9 154 29.218 T 11-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 YH65_02475 0dba4bcb57084bc3de25898c0fe6fce2 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 15 150 7.1E-55 T 11-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 YH65_02475 0dba4bcb57084bc3de25898c0fe6fce2 156 SUPERFAMILY SSF52121 7 154 1.03E-56 T 11-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 YH65_02475 0dba4bcb57084bc3de25898c0fe6fce2 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 14 150 7.2E-52 T 11-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 YH65_00635 35ed0d2793978b48643f67304254813e 328 SUPERFAMILY SSF52402 11 211 7.72E-45 T 11-10-2018 YH65_00635 35ed0d2793978b48643f67304254813e 328 Gene3D G3DSA:3.40.50.620 6 216 2.4E-45 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YH65_00635 35ed0d2793978b48643f67304254813e 328 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 2 260 18.87 T 11-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 YH65_00635 35ed0d2793978b48643f67304254813e 328 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 14 188 1.3E-48 T 11-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 YH65_00635 35ed0d2793978b48643f67304254813e 328 Pfam PF01171 PP-loop family 14 186 2.4E-50 T 11-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 YH65_02625 d4fc0c909a40e35589709716f5ce5a9a 163 Gene3D G3DSA:3.40.50.1240 1 162 7.2E-39 T 11-10-2018 IPR029033 Histidine phosphatase superfamily YH65_02625 d4fc0c909a40e35589709716f5ce5a9a 163 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 82 1.5E-9 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 YH65_02625 d4fc0c909a40e35589709716f5ce5a9a 163 SUPERFAMILY SSF53254 1 156 8.05E-25 T 11-10-2018 IPR029033 Histidine phosphatase superfamily YH65_09040 87f4536cfd04f23252cf58605f2ff4e1 219 SUPERFAMILY SSF57802 2 36 1.33E-9 T 11-10-2018 YH65_09040 87f4536cfd04f23252cf58605f2ff4e1 219 Gene3D G3DSA:1.20.1260.10 36 170 2.3E-39 T 11-10-2018 IPR012347 Ferritin-like YH65_09040 87f4536cfd04f23252cf58605f2ff4e1 219 Gene3D G3DSA:2.20.28.100 1 35 6.8E-11 T 11-10-2018 IPR038094 Desulforodoxin domain superfamily YH65_09040 87f4536cfd04f23252cf58605f2ff4e1 219 Pfam PF06397 Desulfoferrodoxin, N-terminal domain 3 35 2.2E-11 T 11-10-2018 IPR004462 Desulforodoxin domain GO:0005506 YH65_09040 87f4536cfd04f23252cf58605f2ff4e1 219 Pfam PF02915 Rubrerythrin 44 163 3.7E-21 T 11-10-2018 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 YH65_09040 87f4536cfd04f23252cf58605f2ff4e1 219 TIGRFAM TIGR00319 desulf_FeS4: desulfoferrodoxin FeS4 iron-binding domain 3 33 8.0E-12 T 11-10-2018 IPR004462 Desulforodoxin domain GO:0005506 YH65_09040 87f4536cfd04f23252cf58605f2ff4e1 219 Gene3D G3DSA:2.20.28.10 172 215 4.3E-14 T 11-10-2018 YH65_09040 87f4536cfd04f23252cf58605f2ff4e1 219 SUPERFAMILY SSF57802 174 213 2.36E-10 T 11-10-2018 YH65_09040 87f4536cfd04f23252cf58605f2ff4e1 219 SUPERFAMILY SSF47240 41 171 4.81E-31 T 11-10-2018 IPR009078 Ferritin-like superfamily YH65_08910 dd95bf39b0f931d2f136adb97339858f 237 TIGRFAM TIGR00478 tly: TlyA family rRNA methyltransferase/putative hemolysin 2 229 5.4E-61 T 11-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 YH65_08910 dd95bf39b0f931d2f136adb97339858f 237 SMART SM00363 1 64 1.9E-13 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_08910 dd95bf39b0f931d2f136adb97339858f 237 Pfam PF01728 FtsJ-like methyltransferase 55 185 3.6E-12 T 11-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 YH65_08910 dd95bf39b0f931d2f136adb97339858f 237 Gene3D G3DSA:3.40.50.150 58 237 9.8E-53 T 11-10-2018 YH65_08910 dd95bf39b0f931d2f136adb97339858f 237 Gene3D G3DSA:3.10.290.10 1 57 1.2E-14 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 YH65_08910 dd95bf39b0f931d2f136adb97339858f 237 Pfam PF01479 S4 domain 1 46 8.0E-12 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_08910 dd95bf39b0f931d2f136adb97339858f 237 SUPERFAMILY SSF53335 53 234 6.31E-17 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YH65_08910 dd95bf39b0f931d2f136adb97339858f 237 SUPERFAMILY SSF55174 1 64 8.83E-13 T 11-10-2018 YH65_04095 650eb58a302cefde0da71dbd5d7040a1 673 SUPERFAMILY SSF53335 91 479 8.79E-54 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YH65_04095 650eb58a302cefde0da71dbd5d7040a1 673 Pfam PF01555 DNA methylase 118 475 1.1E-40 T 11-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 YH65_04095 650eb58a302cefde0da71dbd5d7040a1 673 PIRSF PIRSF015855 1 668 1.9E-148 T 11-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 YH65_04095 650eb58a302cefde0da71dbd5d7040a1 673 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 182 201 2.4E-13 T 11-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 YH65_04095 650eb58a302cefde0da71dbd5d7040a1 673 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 440 454 2.4E-13 T 11-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 YH65_04095 650eb58a302cefde0da71dbd5d7040a1 673 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 118 130 2.4E-13 T 11-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 YH65_04095 650eb58a302cefde0da71dbd5d7040a1 673 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 121 127 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 YH65_07695 b6283ad31cb795c0bc8b78cb2a3a9819 451 ProSitePatterns PS00080 Multicopper oxidases signature 2. 433 444 - T 11-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 YH65_07695 b6283ad31cb795c0bc8b78cb2a3a9819 451 Gene3D G3DSA:2.60.40.420 13 157 8.0E-39 T 11-10-2018 IPR008972 Cupredoxin YH65_07695 b6283ad31cb795c0bc8b78cb2a3a9819 451 SUPERFAMILY SSF49503 26 154 5.43E-25 T 11-10-2018 IPR008972 Cupredoxin YH65_07695 b6283ad31cb795c0bc8b78cb2a3a9819 451 Pfam PF00394 Multicopper oxidase 213 278 2.0E-4 T 11-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 YH65_07695 b6283ad31cb795c0bc8b78cb2a3a9819 451 Pfam PF07732 Multicopper oxidase 43 152 9.5E-26 T 11-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 YH65_07695 b6283ad31cb795c0bc8b78cb2a3a9819 451 Pfam PF07731 Multicopper oxidase 329 450 1.7E-24 T 11-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 YH65_07695 b6283ad31cb795c0bc8b78cb2a3a9819 451 SUPERFAMILY SSF49503 158 279 5.37E-22 T 11-10-2018 IPR008972 Cupredoxin YH65_07695 b6283ad31cb795c0bc8b78cb2a3a9819 451 Gene3D G3DSA:2.60.40.420 158 313 4.2E-40 T 11-10-2018 IPR008972 Cupredoxin YH65_07695 b6283ad31cb795c0bc8b78cb2a3a9819 451 Gene3D G3DSA:2.60.40.420 314 451 9.1E-40 T 11-10-2018 IPR008972 Cupredoxin YH65_07695 b6283ad31cb795c0bc8b78cb2a3a9819 451 SUPERFAMILY SSF49503 309 450 2.72E-29 T 11-10-2018 IPR008972 Cupredoxin YH65_01795 60ec6b05bfb86eb52238a388f5ec8eef 252 SUPERFAMILY SSF52833 100 232 4.06E-12 T 11-10-2018 IPR036249 Thioredoxin-like superfamily YH65_01795 60ec6b05bfb86eb52238a388f5ec8eef 252 Pfam PF13098 Thioredoxin-like domain 115 231 3.9E-8 T 11-10-2018 IPR012336 Thioredoxin-like fold YH65_01795 60ec6b05bfb86eb52238a388f5ec8eef 252 Gene3D G3DSA:3.40.30.10 107 236 7.1E-24 T 11-10-2018 YH65_00695 e6cfd9bb426d1e78e18e8d8eb4266c37 428 Pfam PF00654 Voltage gated chloride channel 59 398 1.7E-49 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 YH65_00695 e6cfd9bb426d1e78e18e8d8eb4266c37 428 PRINTS PR00762 Chloride channel signature 372 391 1.4E-24 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 YH65_00695 e6cfd9bb426d1e78e18e8d8eb4266c37 428 PRINTS PR00762 Chloride channel signature 150 169 1.4E-24 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 YH65_00695 e6cfd9bb426d1e78e18e8d8eb4266c37 428 PRINTS PR00762 Chloride channel signature 354 370 1.4E-24 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 YH65_00695 e6cfd9bb426d1e78e18e8d8eb4266c37 428 PRINTS PR00762 Chloride channel signature 320 340 1.4E-24 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 YH65_00695 e6cfd9bb426d1e78e18e8d8eb4266c37 428 PRINTS PR00762 Chloride channel signature 99 118 1.4E-24 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 YH65_00695 e6cfd9bb426d1e78e18e8d8eb4266c37 428 SUPERFAMILY SSF81340 3 404 1.14E-61 T 11-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 YH65_00695 e6cfd9bb426d1e78e18e8d8eb4266c37 428 Gene3D G3DSA:1.10.3080.10 1 424 7.1E-61 T 11-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 YH65_03430 02da6a206a9810c211b778103afc6088 612 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 401 414 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 YH65_03430 02da6a206a9810c211b778103afc6088 612 Gene3D G3DSA:1.10.10.10 527 612 9.9E-31 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YH65_03430 02da6a206a9810c211b778103afc6088 612 Pfam PF04539 Sigma-70 region 3 456 532 2.8E-25 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 YH65_03430 02da6a206a9810c211b778103afc6088 612 Pfam PF00140 Sigma-70 factor, region 1.2 104 135 1.5E-16 T 11-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YH65_03430 02da6a206a9810c211b778103afc6088 612 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 373 610 2.4E-116 T 11-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 YH65_03430 02da6a206a9810c211b778103afc6088 612 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 376 599 1.0E-41 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 YH65_03430 02da6a206a9810c211b778103afc6088 612 SUPERFAMILY SSF88659 450 523 4.05E-18 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like YH65_03430 02da6a206a9810c211b778103afc6088 612 PRINTS PR00046 Major sigma-70 factor signature 571 586 1.6E-29 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 YH65_03430 02da6a206a9810c211b778103afc6088 612 PRINTS PR00046 Major sigma-70 factor signature 401 414 1.6E-29 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 YH65_03430 02da6a206a9810c211b778103afc6088 612 PRINTS PR00046 Major sigma-70 factor signature 586 597 1.6E-29 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 YH65_03430 02da6a206a9810c211b778103afc6088 612 PRINTS PR00046 Major sigma-70 factor signature 425 433 1.6E-29 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 YH65_03430 02da6a206a9810c211b778103afc6088 612 PRINTS PR00046 Major sigma-70 factor signature 549 561 1.6E-29 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 YH65_03430 02da6a206a9810c211b778103afc6088 612 SUPERFAMILY SSF88946 120 444 2.04E-61 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 YH65_03430 02da6a206a9810c211b778103afc6088 612 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 571 597 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 YH65_03430 02da6a206a9810c211b778103afc6088 612 Pfam PF04542 Sigma-70 region 2 379 446 1.4E-21 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 YH65_03430 02da6a206a9810c211b778103afc6088 612 Gene3D G3DSA:1.10.601.10 101 449 9.2E-85 T 11-10-2018 YH65_03430 02da6a206a9810c211b778103afc6088 612 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 5 611 36.379 T 11-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 YH65_03430 02da6a206a9810c211b778103afc6088 612 SUPERFAMILY SSF88659 507 609 1.29E-26 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like YH65_03430 02da6a206a9810c211b778103afc6088 612 Pfam PF04545 Sigma-70, region 4 545 599 1.3E-19 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 YH65_03430 02da6a206a9810c211b778103afc6088 612 Gene3D G3DSA:1.10.10.10 450 526 9.4E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YH65_04445 68fe5ece24e4bb719a3e5d43d080002c 301 SMART SM00880 17 281 4.8E-52 T 11-10-2018 IPR007899 CHAD domain YH65_04445 68fe5ece24e4bb719a3e5d43d080002c 301 Gene3D G3DSA:1.40.20.10 2 300 3.1E-48 T 11-10-2018 IPR038186 CHAD domain superfamily YH65_04445 68fe5ece24e4bb719a3e5d43d080002c 301 Pfam PF05235 CHAD domain 18 245 2.4E-39 T 11-10-2018 IPR007899 CHAD domain YH65_00500 4a79a8f1acd126d8a553a4735736ae6a 631 Pfam PF00361 Proton-conducting membrane transporter 133 431 1.0E-77 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_00500 4a79a8f1acd126d8a553a4735736ae6a 631 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 84 104 8.2E-15 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 YH65_00500 4a79a8f1acd126d8a553a4735736ae6a 631 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 272 294 8.2E-15 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 YH65_00500 4a79a8f1acd126d8a553a4735736ae6a 631 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 423 445 8.2E-15 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 YH65_00500 4a79a8f1acd126d8a553a4735736ae6a 631 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 58 82 8.2E-15 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 YH65_00500 4a79a8f1acd126d8a553a4735736ae6a 631 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 65 121 8.4E-25 T 11-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_00500 4a79a8f1acd126d8a553a4735736ae6a 631 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 4 623 7.7E-223 T 11-10-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_00500 4a79a8f1acd126d8a553a4735736ae6a 631 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 254 280 4.4E-55 T 11-10-2018 YH65_00500 4a79a8f1acd126d8a553a4735736ae6a 631 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 424 443 4.4E-55 T 11-10-2018 YH65_00500 4a79a8f1acd126d8a553a4735736ae6a 631 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 110 130 4.4E-55 T 11-10-2018 YH65_00500 4a79a8f1acd126d8a553a4735736ae6a 631 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 322 334 4.4E-55 T 11-10-2018 YH65_00500 4a79a8f1acd126d8a553a4735736ae6a 631 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 82 107 4.4E-55 T 11-10-2018 YH65_00500 4a79a8f1acd126d8a553a4735736ae6a 631 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 232 253 4.4E-55 T 11-10-2018 YH65_02050 c40bb2427ce360bda1c83c3e434346b4 278 Gene3D G3DSA:3.40.50.720 1 173 3.2E-44 T 11-10-2018 YH65_02050 c40bb2427ce360bda1c83c3e434346b4 278 SUPERFAMILY SSF51735 4 167 7.22E-38 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily YH65_02050 c40bb2427ce360bda1c83c3e434346b4 278 Gene3D G3DSA:1.10.3660.10 174 277 3.6E-35 T 11-10-2018 YH65_02050 c40bb2427ce360bda1c83c3e434346b4 278 Pfam PF02153 Prephenate dehydrogenase 18 269 7.7E-79 T 11-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 YH65_02050 c40bb2427ce360bda1c83c3e434346b4 278 SUPERFAMILY SSF48179 171 277 1.81E-34 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 YH65_05130 ed7d43916964c805cb2822052166a339 365 SUPERFAMILY SSF53850 155 263 1.04E-5 T 11-10-2018 YH65_05130 ed7d43916964c805cb2822052166a339 365 PIRSF PIRSF039026 1 365 2.3E-129 T 11-10-2018 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like YH65_05130 ed7d43916964c805cb2822052166a339 365 Gene3D G3DSA:3.40.190.10 163 332 1.5E-117 T 11-10-2018 YH65_05130 ed7d43916964c805cb2822052166a339 365 Gene3D G3DSA:3.40.190.170 44 345 1.5E-117 T 11-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily YH65_05130 ed7d43916964c805cb2822052166a339 365 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 21 6.6E-4 T 11-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal YH65_05130 ed7d43916964c805cb2822052166a339 365 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 47 325 9.2E-50 T 11-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 YH65_03915 7a11961d82928976509c7592a7f1a012 1037 Gene3D G3DSA:1.20.1640.10 509 1026 1.4E-237 T 11-10-2018 YH65_03915 7a11961d82928976509c7592a7f1a012 1037 Gene3D G3DSA:3.30.70.1430 560 659 1.4E-237 T 11-10-2018 YH65_03915 7a11961d82928976509c7592a7f1a012 1037 SUPERFAMILY SSF82714 183 263 2.35E-15 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YH65_03915 7a11961d82928976509c7592a7f1a012 1037 Pfam PF00873 AcrB/AcrD/AcrF family 6 1028 8.5E-218 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_03915 7a11961d82928976509c7592a7f1a012 1037 Gene3D G3DSA:3.30.70.1440 660 859 1.4E-237 T 11-10-2018 YH65_03915 7a11961d82928976509c7592a7f1a012 1037 SUPERFAMILY SSF82714 717 798 1.7E-11 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YH65_03915 7a11961d82928976509c7592a7f1a012 1037 Gene3D G3DSA:3.30.2090.10 714 801 1.4E-237 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YH65_03915 7a11961d82928976509c7592a7f1a012 1037 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1036 0.0 T 11-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 YH65_03915 7a11961d82928976509c7592a7f1a012 1037 PRINTS PR00702 Acriflavin resistance protein family signature 328 351 1.5E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_03915 7a11961d82928976509c7592a7f1a012 1037 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 1.5E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_03915 7a11961d82928976509c7592a7f1a012 1037 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 1.5E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_03915 7a11961d82928976509c7592a7f1a012 1037 PRINTS PR00702 Acriflavin resistance protein family signature 545 562 1.5E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_03915 7a11961d82928976509c7592a7f1a012 1037 PRINTS PR00702 Acriflavin resistance protein family signature 355 376 1.5E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_03915 7a11961d82928976509c7592a7f1a012 1037 PRINTS PR00702 Acriflavin resistance protein family signature 383 407 1.5E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_03915 7a11961d82928976509c7592a7f1a012 1037 Gene3D G3DSA:3.30.70.1430 42 809 1.4E-237 T 11-10-2018 YH65_03915 7a11961d82928976509c7592a7f1a012 1037 Gene3D G3DSA:3.30.70.1320 135 324 1.4E-237 T 11-10-2018 YH65_03915 7a11961d82928976509c7592a7f1a012 1037 Gene3D G3DSA:3.30.2090.10 179 269 1.4E-237 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YH65_03915 7a11961d82928976509c7592a7f1a012 1037 SUPERFAMILY SSF82866 799 1035 8.37E-40 T 11-10-2018 YH65_03915 7a11961d82928976509c7592a7f1a012 1037 Gene3D G3DSA:1.20.1640.10 12 508 1.4E-237 T 11-10-2018 YH65_03915 7a11961d82928976509c7592a7f1a012 1037 SUPERFAMILY SSF82866 291 498 2.09E-40 T 11-10-2018 YH65_03915 7a11961d82928976509c7592a7f1a012 1037 SUPERFAMILY SSF82693 43 126 9.94E-18 T 11-10-2018 YH65_03915 7a11961d82928976509c7592a7f1a012 1037 SUPERFAMILY SSF82693 138 322 2.62E-12 T 11-10-2018 YH65_10685 fdb8bc3ede881fc0fe6ae7cac67c8a8f 208 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 97 1.4E-28 T 11-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 YH65_10685 fdb8bc3ede881fc0fe6ae7cac67c8a8f 208 Gene3D G3DSA:3.10.290.10 97 193 4.5E-82 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 YH65_10685 fdb8bc3ede881fc0fe6ae7cac67c8a8f 208 SUPERFAMILY SSF55174 3 208 3.4E-70 T 11-10-2018 YH65_10685 fdb8bc3ede881fc0fe6ae7cac67c8a8f 208 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 208 3.9E-83 T 11-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 YH65_10685 fdb8bc3ede881fc0fe6ae7cac67c8a8f 208 SMART SM01390 3 97 1.1E-44 T 11-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 YH65_10685 fdb8bc3ede881fc0fe6ae7cac67c8a8f 208 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 208 36.516 T 11-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 YH65_10685 fdb8bc3ede881fc0fe6ae7cac67c8a8f 208 SMART SM00363 98 162 1.3E-20 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_10685 fdb8bc3ede881fc0fe6ae7cac67c8a8f 208 Pfam PF01479 S4 domain 98 145 2.0E-20 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_10685 fdb8bc3ede881fc0fe6ae7cac67c8a8f 208 ProSitePatterns PS00632 Ribosomal protein S4 signature. 96 120 - T 11-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_10685 fdb8bc3ede881fc0fe6ae7cac67c8a8f 208 Gene3D G3DSA:1.10.1050.10 6 208 4.5E-82 T 11-10-2018 YH65_06530 978f3a3c4cb21cae82730e3f2db2654a 335 SUPERFAMILY SSF51735 2 167 4.36E-37 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily YH65_06530 978f3a3c4cb21cae82730e3f2db2654a 335 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 2 335 1.2E-101 T 11-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 YH65_06530 978f3a3c4cb21cae82730e3f2db2654a 335 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 139 1.6E-27 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 YH65_06530 978f3a3c4cb21cae82730e3f2db2654a 335 SUPERFAMILY SSF55347 147 303 1.96E-41 T 11-10-2018 YH65_06530 978f3a3c4cb21cae82730e3f2db2654a 335 Gene3D G3DSA:3.30.360.10 146 307 5.4E-99 T 11-10-2018 YH65_06530 978f3a3c4cb21cae82730e3f2db2654a 335 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 169 305 2.0E-14 T 11-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 YH65_06530 978f3a3c4cb21cae82730e3f2db2654a 335 Gene3D G3DSA:3.40.50.720 6 324 5.4E-99 T 11-10-2018 YH65_06530 978f3a3c4cb21cae82730e3f2db2654a 335 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 142 158 - T 11-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 YH65_06530 978f3a3c4cb21cae82730e3f2db2654a 335 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 329 35.211 T 11-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 YH65_06530 978f3a3c4cb21cae82730e3f2db2654a 335 SMART SM00859 3 139 4.9E-40 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 YH65_03770 3394996a75eb97fd7124a2581741ca1b 94 Pfam PF01381 Helix-turn-helix 21 68 8.4E-10 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YH65_03770 3394996a75eb97fd7124a2581741ca1b 94 SUPERFAMILY SSF47413 9 68 3.1E-11 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 YH65_03770 3394996a75eb97fd7124a2581741ca1b 94 Gene3D G3DSA:1.10.260.40 9 81 5.1E-11 T 11-10-2018 YH65_03770 3394996a75eb97fd7124a2581741ca1b 94 SMART SM00530 19 73 1.8E-7 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YH65_08825 f2c35b6a35c23e1d3a7ed970aa19a5f8 416 SUPERFAMILY SSF53383 6 412 4.03E-175 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase YH65_08825 f2c35b6a35c23e1d3a7ed970aa19a5f8 416 Gene3D G3DSA:3.90.1150.10 7 391 1.2E-178 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 YH65_08825 f2c35b6a35c23e1d3a7ed970aa19a5f8 416 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 218 234 - T 11-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 YH65_08825 f2c35b6a35c23e1d3a7ed970aa19a5f8 416 Gene3D G3DSA:3.40.640.10 34 284 1.2E-178 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 YH65_08825 f2c35b6a35c23e1d3a7ed970aa19a5f8 416 PIRSF PIRSF000412 2 414 1.5E-162 T 11-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 YH65_08825 f2c35b6a35c23e1d3a7ed970aa19a5f8 416 Pfam PF00464 Serine hydroxymethyltransferase 6 380 5.4E-175 T 11-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 YH65_08825 f2c35b6a35c23e1d3a7ed970aa19a5f8 416 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 4 412 50.67 T 11-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 YH65_03125 529cac2d89e2ea3141a4fa8bab756ba1 366 PIRSF PIRSF000443 1 366 1.3E-129 T 11-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 YH65_03125 529cac2d89e2ea3141a4fa8bab756ba1 366 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 12 363 3.7E-119 T 11-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 YH65_03125 529cac2d89e2ea3141a4fa8bab756ba1 366 Gene3D G3DSA:3.40.50.1820 17 358 1.1E-125 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold YH65_03125 529cac2d89e2ea3141a4fa8bab756ba1 366 Hamap MF_00296 Homoserine O-acetyltransferase [metXA]. 1 364 28.733 T 11-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 YH65_03125 529cac2d89e2ea3141a4fa8bab756ba1 366 Gene3D G3DSA:1.10.1740.110 176 283 1.1E-125 T 11-10-2018 YH65_03125 529cac2d89e2ea3141a4fa8bab756ba1 366 Pfam PF00561 alpha/beta hydrolase fold 41 351 1.4E-22 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 YH65_03125 529cac2d89e2ea3141a4fa8bab756ba1 366 SUPERFAMILY SSF53474 8 365 6.99E-91 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold YH65_00780 00961cec1fea012b692e7a761dd80996 173 Gene3D G3DSA:3.30.450.20 13 127 2.0E-21 T 11-10-2018 YH65_00780 00961cec1fea012b692e7a761dd80996 173 Pfam PF08447 PAS fold 30 111 6.4E-13 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 YH65_00780 00961cec1fea012b692e7a761dd80996 173 SUPERFAMILY SSF55785 22 112 2.58E-25 T 11-10-2018 IPR035965 PAS domain superfamily YH65_00780 00961cec1fea012b692e7a761dd80996 173 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 23 122 1.4E-12 T 11-10-2018 IPR000014 PAS domain YH65_09060 c2990c92fda995d69480acaf77cdefa3 277 Gene3D G3DSA:3.30.2010.10 57 148 6.8E-32 T 11-10-2018 YH65_09060 c2990c92fda995d69480acaf77cdefa3 277 Pfam PF01435 Peptidase family M48 69 275 2.6E-38 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 YH65_09060 c2990c92fda995d69480acaf77cdefa3 277 Hamap MF_00188 Protease HtpX [htpX]. 3 275 27.614 T 11-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 YH65_00485 e740a4f26491cecdab4aad7801a8ea19 207 Pfam PF12838 4Fe-4S dicluster domain 96 148 8.0E-11 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YH65_00485 e740a4f26491cecdab4aad7801a8ea19 207 Gene3D G3DSA:3.30.70.3270 69 203 3.2E-30 T 11-10-2018 YH65_00485 e740a4f26491cecdab4aad7801a8ea19 207 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 56 168 2.1E-37 T 11-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_00485 e740a4f26491cecdab4aad7801a8ea19 207 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 38 198 24.699 T 11-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_00485 e740a4f26491cecdab4aad7801a8ea19 207 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 136 147 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YH65_00485 e740a4f26491cecdab4aad7801a8ea19 207 SUPERFAMILY SSF54862 69 167 3.39E-21 T 11-10-2018 YH65_09400 b7a2ae4577e3d3d44e3178783e86b78f 476 Pfam PF00120 Glutamine synthetase, catalytic domain 107 453 8.5E-124 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 YH65_09400 b7a2ae4577e3d3d44e3178783e86b78f 476 Gene3D G3DSA:3.30.590.10 110 457 5.8E-124 T 11-10-2018 YH65_09400 b7a2ae4577e3d3d44e3178783e86b78f 476 Gene3D G3DSA:3.10.20.70 7 109 6.5E-34 T 11-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 YH65_09400 b7a2ae4577e3d3d44e3178783e86b78f 476 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 19 99 2.7E-30 T 11-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 YH65_09400 b7a2ae4577e3d3d44e3178783e86b78f 476 SMART SM01230 107 385 2.9E-134 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 YH65_09400 b7a2ae4577e3d3d44e3178783e86b78f 476 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 264 279 - T 11-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 YH65_09400 b7a2ae4577e3d3d44e3178783e86b78f 476 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 10 474 6.1E-189 T 11-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 YH65_09400 b7a2ae4577e3d3d44e3178783e86b78f 476 SUPERFAMILY SSF54368 8 106 2.22E-33 T 11-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 YH65_09400 b7a2ae4577e3d3d44e3178783e86b78f 476 ProSitePatterns PS00180 Glutamine synthetase signature 1. 55 73 - T 11-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 YH65_09400 b7a2ae4577e3d3d44e3178783e86b78f 476 SUPERFAMILY SSF55931 107 475 2.65E-119 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 YH65_08570 d3bef182ee4e9b8a48997b7cd34e7d97 458 Pfam PF11067 Protein of unknown function (DUF2868) 134 450 2.2E-70 T 11-10-2018 IPR021296 Protein of unknown function DUF2868 YH65_07120 a1181f07aef44f582292b407458f69de 383 Pfam PF16363 GDP-mannose 4,6 dehydratase 8 357 1.1E-156 T 11-10-2018 IPR016040 NAD(P)-binding domain YH65_07120 a1181f07aef44f582292b407458f69de 383 SUPERFAMILY SSF51735 5 362 8.96E-78 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily YH65_07120 a1181f07aef44f582292b407458f69de 383 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 5 367 55.639 T 11-10-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 YH65_07120 a1181f07aef44f582292b407458f69de 383 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 5 364 6.7E-183 T 11-10-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 YH65_07120 a1181f07aef44f582292b407458f69de 383 Gene3D G3DSA:3.90.25.10 195 362 1.1E-160 T 11-10-2018 YH65_07120 a1181f07aef44f582292b407458f69de 383 Gene3D G3DSA:3.40.50.720 7 348 1.1E-160 T 11-10-2018 YH65_02380 a1181f07aef44f582292b407458f69de 383 Pfam PF16363 GDP-mannose 4,6 dehydratase 8 357 1.1E-156 T 11-10-2018 IPR016040 NAD(P)-binding domain YH65_02380 a1181f07aef44f582292b407458f69de 383 SUPERFAMILY SSF51735 5 362 8.96E-78 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily YH65_02380 a1181f07aef44f582292b407458f69de 383 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 5 367 55.639 T 11-10-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 YH65_02380 a1181f07aef44f582292b407458f69de 383 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 5 364 6.7E-183 T 11-10-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 YH65_02380 a1181f07aef44f582292b407458f69de 383 Gene3D G3DSA:3.90.25.10 195 362 1.1E-160 T 11-10-2018 YH65_02380 a1181f07aef44f582292b407458f69de 383 Gene3D G3DSA:3.40.50.720 7 348 1.1E-160 T 11-10-2018 YH65_08885 4ba9907c544eb1191cb36ca43dd73510 396 SMART SM00388 202 260 4.6E-4 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YH65_08885 4ba9907c544eb1191cb36ca43dd73510 396 Gene3D G3DSA:3.30.565.10 264 396 2.5E-15 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YH65_08885 4ba9907c544eb1191cb36ca43dd73510 396 Gene3D G3DSA:1.10.287.130 147 253 1.7E-17 T 11-10-2018 YH65_08885 4ba9907c544eb1191cb36ca43dd73510 396 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 310 388 3.4E-8 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YH65_08885 4ba9907c544eb1191cb36ca43dd73510 396 SUPERFAMILY SSF47384 186 259 1.63E-7 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 YH65_08885 4ba9907c544eb1191cb36ca43dd73510 396 SUPERFAMILY SSF55874 266 391 1.96E-18 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YH65_08885 4ba9907c544eb1191cb36ca43dd73510 396 SUPERFAMILY SSF158472 152 198 1.83E-5 T 11-10-2018 YH65_08885 4ba9907c544eb1191cb36ca43dd73510 396 SMART SM00304 149 201 2.1E-4 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 YH65_08885 4ba9907c544eb1191cb36ca43dd73510 396 SMART SM00387 303 396 3.5E-5 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YH65_00690 17ab730271422a80117f3eb1ed35bdd3 277 SMART SM00387 170 274 1.5E-19 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YH65_00690 17ab730271422a80117f3eb1ed35bdd3 277 SMART SM00388 65 129 0.0016 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YH65_00690 17ab730271422a80117f3eb1ed35bdd3 277 SUPERFAMILY SSF55874 133 270 7.41E-22 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YH65_00690 17ab730271422a80117f3eb1ed35bdd3 277 Gene3D G3DSA:3.30.565.10 134 274 1.6E-22 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YH65_00690 17ab730271422a80117f3eb1ed35bdd3 277 SUPERFAMILY SSF47384 59 125 5.49E-7 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 YH65_00690 17ab730271422a80117f3eb1ed35bdd3 277 Gene3D G3DSA:1.10.287.130 57 127 5.4E-9 T 11-10-2018 YH65_00690 17ab730271422a80117f3eb1ed35bdd3 277 PRINTS PR00344 Bacterial sensor protein C-terminal signature 221 231 5.4E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YH65_00690 17ab730271422a80117f3eb1ed35bdd3 277 PRINTS PR00344 Bacterial sensor protein C-terminal signature 203 217 5.4E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YH65_00690 17ab730271422a80117f3eb1ed35bdd3 277 PRINTS PR00344 Bacterial sensor protein C-terminal signature 258 271 5.4E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YH65_00690 17ab730271422a80117f3eb1ed35bdd3 277 PRINTS PR00344 Bacterial sensor protein C-terminal signature 234 252 5.4E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YH65_00690 17ab730271422a80117f3eb1ed35bdd3 277 Pfam PF00512 His Kinase A (phospho-acceptor) domain 67 122 6.8E-8 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YH65_00690 17ab730271422a80117f3eb1ed35bdd3 277 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 171 269 2.8E-15 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YH65_02785 459fee094c73f6623b60b9812201acd7 412 SUPERFAMILY SSF56935 70 412 9.16E-25 T 11-10-2018 YH65_02785 459fee094c73f6623b60b9812201acd7 412 Pfam PF07396 Phosphate-selective porin O and P 107 402 1.2E-4 T 11-10-2018 IPR010870 Phosphate-selective porin O/P YH65_02785 459fee094c73f6623b60b9812201acd7 412 Gene3D G3DSA:2.40.160.10 183 412 2.0E-6 T 11-10-2018 IPR023614 Porin domain superfamily YH65_02140 6749182c9618dea7444bdf587d3370a0 908 Gene3D G3DSA:1.10.10.2480 1 63 6.1E-8 T 11-10-2018 YH65_02140 6749182c9618dea7444bdf587d3370a0 908 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 409 566 1.1E-34 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 YH65_02140 6749182c9618dea7444bdf587d3370a0 908 SUPERFAMILY SSF50447 580 662 3.12E-20 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily YH65_02140 6749182c9618dea7444bdf587d3370a0 908 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 906 16.68 T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 YH65_02140 6749182c9618dea7444bdf587d3370a0 908 Pfam PF00009 Elongation factor Tu GTP binding domain 412 568 4.7E-35 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YH65_02140 6749182c9618dea7444bdf587d3370a0 908 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 330 381 1.5E-13 T 11-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal YH65_02140 6749182c9618dea7444bdf587d3370a0 908 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 49 2.4E-10 T 11-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal YH65_02140 6749182c9618dea7444bdf587d3370a0 908 SUPERFAMILY SSF50447 810 903 3.53E-31 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily YH65_02140 6749182c9618dea7444bdf587d3370a0 908 Gene3D G3DSA:2.40.30.10 810 906 7.2E-31 T 11-10-2018 YH65_02140 6749182c9618dea7444bdf587d3370a0 908 Pfam PF11987 Translation-initiation factor 2 696 798 4.6E-37 T 11-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 YH65_02140 6749182c9618dea7444bdf587d3370a0 908 Gene3D G3DSA:3.40.50.300 404 578 8.0E-72 T 11-10-2018 YH65_02140 6749182c9618dea7444bdf587d3370a0 908 SUPERFAMILY SSF52540 401 579 1.05E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_02140 6749182c9618dea7444bdf587d3370a0 908 Gene3D G3DSA:3.40.50.10050 701 809 1.0E-37 T 11-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily YH65_02140 6749182c9618dea7444bdf587d3370a0 908 SUPERFAMILY SSF52156 684 815 8.5E-36 T 11-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily YH65_02140 6749182c9618dea7444bdf587d3370a0 908 Gene3D G3DSA:2.40.30.10 579 629 1.3E-5 T 11-10-2018 YH65_02140 6749182c9618dea7444bdf587d3370a0 908 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 325 905 3.8E-249 T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 YH65_07635 a0bff091edba4f68a30afaaee14e9d45 74 Pfam PF04023 FeoA domain 1 72 4.4E-17 T 11-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 YH65_07635 a0bff091edba4f68a30afaaee14e9d45 74 SMART SM00899 1 73 4.1E-19 T 11-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 YH65_07635 a0bff091edba4f68a30afaaee14e9d45 74 SUPERFAMILY SSF50037 3 73 8.24E-15 T 11-10-2018 IPR008988 Transcriptional repressor, C-terminal YH65_07635 a0bff091edba4f68a30afaaee14e9d45 74 Gene3D G3DSA:2.30.30.90 1 74 2.0E-19 T 11-10-2018 IPR038157 Ferrous iron transporter, core domain YH65_09685 c8774fb55cbc7447ee5e49b0f1490911 270 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 130 158 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 YH65_09685 c8774fb55cbc7447ee5e49b0f1490911 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 70 81 1.5E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YH65_09685 c8774fb55cbc7447ee5e49b0f1490911 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 143 162 1.5E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YH65_09685 c8774fb55cbc7447ee5e49b0f1490911 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 181 1.5E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YH65_09685 c8774fb55cbc7447ee5e49b0f1490911 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.5E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YH65_09685 c8774fb55cbc7447ee5e49b0f1490911 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 117 133 1.5E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YH65_09685 c8774fb55cbc7447ee5e49b0f1490911 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 162 6.2E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YH65_09685 c8774fb55cbc7447ee5e49b0f1490911 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 123 131 6.2E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YH65_09685 c8774fb55cbc7447ee5e49b0f1490911 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 70 81 6.2E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YH65_09685 c8774fb55cbc7447ee5e49b0f1490911 270 Pfam PF00106 short chain dehydrogenase 3 182 4.6E-47 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YH65_09685 c8774fb55cbc7447ee5e49b0f1490911 270 Gene3D G3DSA:3.40.50.720 2 268 1.7E-60 T 11-10-2018 YH65_09685 c8774fb55cbc7447ee5e49b0f1490911 270 SUPERFAMILY SSF51735 2 239 1.03E-57 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily YH65_07945 9a403da0b518b685ccce41386b42f164 1054 Gene3D G3DSA:1.20.1640.10 12 496 2.6E-222 T 11-10-2018 YH65_07945 9a403da0b518b685ccce41386b42f164 1054 SUPERFAMILY SSF82866 824 1039 5.23E-39 T 11-10-2018 YH65_07945 9a403da0b518b685ccce41386b42f164 1054 SUPERFAMILY SSF82693 44 129 2.88E-12 T 11-10-2018 YH65_07945 9a403da0b518b685ccce41386b42f164 1054 Pfam PF00873 AcrB/AcrD/AcrF family 6 623 5.1E-93 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_07945 9a403da0b518b685ccce41386b42f164 1054 Pfam PF00873 AcrB/AcrD/AcrF family 658 1035 1.3E-46 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_07945 9a403da0b518b685ccce41386b42f164 1054 PRINTS PR00702 Acriflavin resistance protein family signature 433 456 7.8E-25 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_07945 9a403da0b518b685ccce41386b42f164 1054 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 7.8E-25 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_07945 9a403da0b518b685ccce41386b42f164 1054 PRINTS PR00702 Acriflavin resistance protein family signature 326 349 7.8E-25 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_07945 9a403da0b518b685ccce41386b42f164 1054 PRINTS PR00702 Acriflavin resistance protein family signature 380 404 7.8E-25 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_07945 9a403da0b518b685ccce41386b42f164 1054 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 7.8E-25 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_07945 9a403da0b518b685ccce41386b42f164 1054 Gene3D G3DSA:3.30.70.1430 42 830 2.6E-222 T 11-10-2018 YH65_07945 9a403da0b518b685ccce41386b42f164 1054 Gene3D G3DSA:3.30.2090.10 736 822 2.6E-222 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YH65_07945 9a403da0b518b685ccce41386b42f164 1054 Gene3D G3DSA:1.20.1640.10 497 1032 2.6E-222 T 11-10-2018 YH65_07945 9a403da0b518b685ccce41386b42f164 1054 SUPERFAMILY SSF82866 289 480 1.03E-35 T 11-10-2018 YH65_07945 9a403da0b518b685ccce41386b42f164 1054 SUPERFAMILY SSF82714 182 262 5.49E-9 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YH65_07945 9a403da0b518b685ccce41386b42f164 1054 Gene3D G3DSA:3.30.2090.10 177 266 2.6E-222 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YH65_07945 9a403da0b518b685ccce41386b42f164 1054 SUPERFAMILY SSF82693 140 308 3.35E-6 T 11-10-2018 YH65_07945 9a403da0b518b685ccce41386b42f164 1054 Gene3D G3DSA:3.30.70.1320 135 322 2.6E-222 T 11-10-2018 YH65_07945 9a403da0b518b685ccce41386b42f164 1054 Gene3D G3DSA:3.30.70.1430 550 684 2.6E-222 T 11-10-2018 YH65_07945 9a403da0b518b685ccce41386b42f164 1054 Gene3D G3DSA:3.30.70.1440 685 880 2.6E-222 T 11-10-2018 YH65_08460 7f290ca0293e1b94b32d7dc9883f3b14 825 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 825 77.275 T 11-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 YH65_08460 7f290ca0293e1b94b32d7dc9883f3b14 825 PIRSF PIRSF006288 13 670 1.2E-122 T 11-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 YH65_08460 7f290ca0293e1b94b32d7dc9883f3b14 825 PIRSF PIRSF006288 682 819 8.2E-10 T 11-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 YH65_08460 7f290ca0293e1b94b32d7dc9883f3b14 825 Pfam PF01966 HD domain 436 528 1.9E-6 T 11-10-2018 IPR006674 HD domain YH65_08460 7f290ca0293e1b94b32d7dc9883f3b14 825 SUPERFAMILY SSF109604 404 526 9.26E-8 T 11-10-2018 YH65_08460 7f290ca0293e1b94b32d7dc9883f3b14 825 SUPERFAMILY SSF55021 753 817 1.3E-6 T 11-10-2018 YH65_08460 7f290ca0293e1b94b32d7dc9883f3b14 825 Pfam PF08335 GlnD PII-uridylyltransferase 190 316 1.5E-20 T 11-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 YH65_08460 7f290ca0293e1b94b32d7dc9883f3b14 825 SUPERFAMILY SSF81301 52 179 3.87E-19 T 11-10-2018 YH65_08090 71a6125a71d85d39d321324ce7a50af4 119 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 2 115 8.7E-34 T 11-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 YH65_08090 71a6125a71d85d39d321324ce7a50af4 119 Gene3D G3DSA:3.90.470.20 1 115 5.2E-33 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 YH65_08090 71a6125a71d85d39d321324ce7a50af4 119 SUPERFAMILY SSF56214 2 114 4.97E-27 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 YH65_08090 71a6125a71d85d39d321324ce7a50af4 119 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 3 111 2.8E-19 T 11-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 YH65_08090 71a6125a71d85d39d321324ce7a50af4 119 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 1 114 2.8E-27 T 11-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 YH65_08090 71a6125a71d85d39d321324ce7a50af4 119 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 6 105 9.0E-23 T 11-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 YH65_08090 71a6125a71d85d39d321324ce7a50af4 119 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 1 116 22.271 T 11-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 YH65_03955 d1c099e5304077d42d1be0436dccdd37 285 SUPERFAMILY SSF52096 20 233 1.69E-40 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily YH65_03955 d1c099e5304077d42d1be0436dccdd37 285 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 44 246 9.3E-68 T 11-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 YH65_03955 d1c099e5304077d42d1be0436dccdd37 285 Gene3D G3DSA:3.90.226.10 45 237 1.9E-64 T 11-10-2018 YH65_03955 d1c099e5304077d42d1be0436dccdd37 285 Gene3D G3DSA:3.40.1750.20 137 203 1.9E-64 T 11-10-2018 YH65_03955 d1c099e5304077d42d1be0436dccdd37 285 Pfam PF01343 Peptidase family S49 96 248 1.4E-50 T 11-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 YH65_03925 b058ed834aefc458e862f2909004740a 399 SUPERFAMILY SSF56954 4 396 1.96E-31 T 11-10-2018 YH65_03925 b058ed834aefc458e862f2909004740a 399 Gene3D G3DSA:1.20.1600.10 12 397 1.1E-29 T 11-10-2018 YH65_03925 b058ed834aefc458e862f2909004740a 399 Pfam PF02321 Outer membrane efflux protein 21 201 2.2E-7 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 YH65_03925 b058ed834aefc458e862f2909004740a 399 Pfam PF02321 Outer membrane efflux protein 228 396 4.8E-7 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 YH65_01510 d0fdf46f09a2f2da54e2d22fc69b2302 284 Pfam PF10043 Predicted periplasmic lipoprotein (DUF2279) 76 162 7.4E-22 T 11-10-2018 IPR018736 Protein of unknown function DUF2279, periplasmic lipoprotein YH65_08925 ac81aed1430883bce7e08279c9a39b1e 379 Pfam PF00809 Pterin binding enzyme 122 363 6.8E-76 T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 YH65_08925 ac81aed1430883bce7e08279c9a39b1e 379 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 120 377 1.2E-90 T 11-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 YH65_08925 ac81aed1430883bce7e08279c9a39b1e 379 SUPERFAMILY SSF51717 111 378 6.67E-88 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 YH65_08925 ac81aed1430883bce7e08279c9a39b1e 379 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 154 167 - T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 YH65_08925 ac81aed1430883bce7e08279c9a39b1e 379 Gene3D G3DSA:3.20.20.20 107 379 5.3E-93 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 YH65_08925 ac81aed1430883bce7e08279c9a39b1e 379 PIRSF PIRSF000501 1 379 1.3E-143 T 11-10-2018 IPR016227 Dihydropteroate synthase, predicted KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 YH65_08630 ca5e79b041f4480c07890f327acda340 134 Gene3D G3DSA:3.40.30.10 8 134 2.7E-20 T 11-10-2018 YH65_08630 ca5e79b041f4480c07890f327acda340 134 SUPERFAMILY SSF52833 20 127 5.71E-23 T 11-10-2018 IPR036249 Thioredoxin-like superfamily YH65_08630 ca5e79b041f4480c07890f327acda340 134 Pfam PF03190 Protein of unknown function, DUF255 24 76 4.4E-10 T 11-10-2018 IPR004879 Domain of unknown function DUF255 YH65_08690 ca5e79b041f4480c07890f327acda340 134 Gene3D G3DSA:3.40.30.10 8 134 2.7E-20 T 11-10-2018 YH65_08690 ca5e79b041f4480c07890f327acda340 134 SUPERFAMILY SSF52833 20 127 5.71E-23 T 11-10-2018 IPR036249 Thioredoxin-like superfamily YH65_08690 ca5e79b041f4480c07890f327acda340 134 Pfam PF03190 Protein of unknown function, DUF255 24 76 4.4E-10 T 11-10-2018 IPR004879 Domain of unknown function DUF255 YH65_08660 ca5e79b041f4480c07890f327acda340 134 Gene3D G3DSA:3.40.30.10 8 134 2.7E-20 T 11-10-2018 YH65_08660 ca5e79b041f4480c07890f327acda340 134 SUPERFAMILY SSF52833 20 127 5.71E-23 T 11-10-2018 IPR036249 Thioredoxin-like superfamily YH65_08660 ca5e79b041f4480c07890f327acda340 134 Pfam PF03190 Protein of unknown function, DUF255 24 76 4.4E-10 T 11-10-2018 IPR004879 Domain of unknown function DUF255 YH65_05395 34f4afecd1d8097e18d2353139006fa9 355 SUPERFAMILY SSF100950 5 347 1.76E-100 T 11-10-2018 IPR037171 NagB/RpiA transferase-like YH65_05395 34f4afecd1d8097e18d2353139006fa9 355 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 4 354 33.627 T 11-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 YH65_05395 34f4afecd1d8097e18d2353139006fa9 355 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 10 344 3.9E-120 T 11-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 YH65_05395 34f4afecd1d8097e18d2353139006fa9 355 Gene3D G3DSA:1.20.120.1840 6 185 8.0E-49 T 11-10-2018 YH65_05395 34f4afecd1d8097e18d2353139006fa9 355 Gene3D G3DSA:3.40.50.10470 186 353 1.0E-45 T 11-10-2018 YH65_05395 34f4afecd1d8097e18d2353139006fa9 355 Pfam PF01008 Initiation factor 2 subunit family 67 345 7.0E-58 T 11-10-2018 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 YH65_05395 34f4afecd1d8097e18d2353139006fa9 355 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 37 345 6.6E-89 T 11-10-2018 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 YH65_05825 030a903fa2ff9e2e5ae17e39b3b176cb 294 Pfam PF02754 Cysteine-rich domain 151 243 1.8E-10 T 11-10-2018 IPR004017 Cysteine-rich domain YH65_05825 030a903fa2ff9e2e5ae17e39b3b176cb 294 Pfam PF02754 Cysteine-rich domain 6 85 7.2E-15 T 11-10-2018 IPR004017 Cysteine-rich domain YH65_05825 030a903fa2ff9e2e5ae17e39b3b176cb 294 Gene3D G3DSA:3.40.50.11800 2 132 3.5E-5 T 11-10-2018 YH65_05825 030a903fa2ff9e2e5ae17e39b3b176cb 294 Gene3D G3DSA:3.40.50.11810 202 292 8.4E-7 T 11-10-2018 YH65_00935 26d4ccc7e10b8a301320ac210db6014d 1120 Pfam PF05045 Rhamnan synthesis protein F 246 481 1.3E-56 T 11-10-2018 IPR007739 Rhamnan synthesis F YH65_00935 26d4ccc7e10b8a301320ac210db6014d 1120 SUPERFAMILY SSF56784 523 725 5.71E-19 T 11-10-2018 IPR036412 HAD-like superfamily YH65_00935 26d4ccc7e10b8a301320ac210db6014d 1120 Gene3D G3DSA:3.40.50.1000 521 728 5.4E-13 T 11-10-2018 IPR023214 HAD superfamily YH65_06945 0dd0688b8ee833ad9c543ea66153eb36 624 PRINTS PR01180 Arginine decarboxylase signature 75 89 1.6E-37 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 YH65_06945 0dd0688b8ee833ad9c543ea66153eb36 624 PRINTS PR01180 Arginine decarboxylase signature 51 66 1.6E-37 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 YH65_06945 0dd0688b8ee833ad9c543ea66153eb36 624 PRINTS PR01180 Arginine decarboxylase signature 156 177 1.6E-37 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 YH65_06945 0dd0688b8ee833ad9c543ea66153eb36 624 PRINTS PR01180 Arginine decarboxylase signature 447 468 1.6E-37 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 YH65_06945 0dd0688b8ee833ad9c543ea66153eb36 624 PRINTS PR01180 Arginine decarboxylase signature 521 542 1.6E-37 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 YH65_06945 0dd0688b8ee833ad9c543ea66153eb36 624 PRINTS PR01180 Arginine decarboxylase signature 472 497 1.6E-37 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 YH65_06945 0dd0688b8ee833ad9c543ea66153eb36 624 PRINTS PR01180 Arginine decarboxylase signature 312 329 1.6E-37 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 YH65_06945 0dd0688b8ee833ad9c543ea66153eb36 624 PRINTS PR01180 Arginine decarboxylase signature 130 145 1.6E-37 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 YH65_06945 0dd0688b8ee833ad9c543ea66153eb36 624 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 521 534 1.1E-14 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 YH65_06945 0dd0688b8ee833ad9c543ea66153eb36 624 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 107 119 1.1E-14 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 YH65_06945 0dd0688b8ee833ad9c543ea66153eb36 624 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 229 242 1.1E-14 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 YH65_06945 0dd0688b8ee833ad9c543ea66153eb36 624 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 83 101 1.1E-14 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 YH65_06945 0dd0688b8ee833ad9c543ea66153eb36 624 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 322 341 1.1E-14 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 YH65_06945 0dd0688b8ee833ad9c543ea66153eb36 624 Gene3D G3DSA:1.20.58.930 349 440 2.0E-183 T 11-10-2018 YH65_06945 0dd0688b8ee833ad9c543ea66153eb36 624 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 64 332 1.1E-28 T 11-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 YH65_06945 0dd0688b8ee833ad9c543ea66153eb36 624 SUPERFAMILY SSF51419 52 334 2.99E-49 T 11-10-2018 IPR029066 PLP-binding barrel YH65_06945 0dd0688b8ee833ad9c543ea66153eb36 624 Gene3D G3DSA:2.40.37.10 4 548 2.0E-183 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 YH65_06945 0dd0688b8ee833ad9c543ea66153eb36 624 SUPERFAMILY SSF50621 431 544 3.98E-15 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 YH65_06945 0dd0688b8ee833ad9c543ea66153eb36 624 TIGRFAM TIGR01273 speA: arginine decarboxylase 2 612 1.3E-198 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 YH65_06945 0dd0688b8ee833ad9c543ea66153eb36 624 PIRSF PIRSF001336 1 614 5.6E-195 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 YH65_06945 0dd0688b8ee833ad9c543ea66153eb36 624 Gene3D G3DSA:3.20.20.10 52 334 2.0E-183 T 11-10-2018 IPR029066 PLP-binding barrel YH65_05220 28512c4070eaec65289a7f2086a24790 304 Gene3D G3DSA:3.30.310.70 32 156 3.0E-9 T 11-10-2018 IPR035923 TT1751-like domain superfamily YH65_05220 28512c4070eaec65289a7f2086a24790 304 SUPERFAMILY SSF103247 192 301 2.62E-12 T 11-10-2018 IPR035923 TT1751-like domain superfamily YH65_05220 28512c4070eaec65289a7f2086a24790 304 Pfam PF03625 Domain of unknown function DUF302 60 119 2.2E-7 T 11-10-2018 IPR005180 Domain of unknown function DUF302 YH65_05220 28512c4070eaec65289a7f2086a24790 304 SUPERFAMILY SSF103247 42 154 1.07E-16 T 11-10-2018 IPR035923 TT1751-like domain superfamily YH65_06045 6aefd05c767e904bce273286b8996e6f 343 PIRSF PIRSF001259 289 343 6.5E-11 T 11-10-2018 YH65_06045 6aefd05c767e904bce273286b8996e6f 343 PIRSF PIRSF001259 3 295 1.4E-78 T 11-10-2018 YH65_06045 6aefd05c767e904bce273286b8996e6f 343 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 5 200 7.0E-76 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 YH65_06045 6aefd05c767e904bce273286b8996e6f 343 SUPERFAMILY SSF55821 4 203 2.52E-80 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily YH65_06045 6aefd05c767e904bce273286b8996e6f 343 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 3 204 38.416 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 YH65_06045 6aefd05c767e904bce273286b8996e6f 343 Gene3D G3DSA:3.40.50.10990 221 343 2.8E-10 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 YH65_06045 6aefd05c767e904bce273286b8996e6f 343 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 9 199 3.6E-79 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 YH65_06045 6aefd05c767e904bce273286b8996e6f 343 Gene3D G3DSA:3.90.870.10 4 212 2.8E-82 T 11-10-2018 YH65_06045 6aefd05c767e904bce273286b8996e6f 343 Pfam PF00925 GTP cyclohydrolase II 293 340 1.8E-11 T 11-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 YH65_06045 6aefd05c767e904bce273286b8996e6f 343 SUPERFAMILY SSF142695 205 341 1.44E-20 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 YH65_09535 0d53b3463d4c0c6d735741730e279e2e 317 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 301 315 - T 11-10-2018 IPR019775 WD40 repeat, conserved site YH65_09535 0d53b3463d4c0c6d735741730e279e2e 317 SUPERFAMILY SSF50998 34 316 1.29E-26 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily YH65_09535 0d53b3463d4c0c6d735741730e279e2e 317 Pfam PF13360 PQQ-like domain 47 278 2.0E-15 T 11-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat YH65_09535 0d53b3463d4c0c6d735741730e279e2e 317 Gene3D G3DSA:2.130.10.10 242 317 7.3E-8 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 YH65_09535 0d53b3463d4c0c6d735741730e279e2e 317 Gene3D G3DSA:2.130.10.10 14 241 1.6E-13 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 YH65_05900 3d50ae8ee7a9e766a943b3b58b4fb2b1 214 Pfam PF01914 MarC family integral membrane protein 7 210 3.2E-47 T 11-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 YH65_05900 3d50ae8ee7a9e766a943b3b58b4fb2b1 214 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 5 207 5.2E-41 T 11-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 YH65_03120 75963ccf7375d02c988bb5cb75ea4ca4 420 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 3 419 1.4E-166 T 11-10-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 YH65_03120 75963ccf7375d02c988bb5cb75ea4ca4 420 SUPERFAMILY SSF53383 1 420 6.92E-114 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase YH65_03120 75963ccf7375d02c988bb5cb75ea4ca4 420 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 419 1.4E-131 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 YH65_03120 75963ccf7375d02c988bb5cb75ea4ca4 420 Gene3D G3DSA:3.90.1150.10 285 420 3.1E-50 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 YH65_03120 75963ccf7375d02c988bb5cb75ea4ca4 420 PIRSF PIRSF001434 1 420 1.8E-123 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 YH65_03120 75963ccf7375d02c988bb5cb75ea4ca4 420 Gene3D G3DSA:3.40.640.10 1 284 6.2E-96 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 YH65_04845 2e96abbc0118f124cecfcd00b6be3342 110 SUPERFAMILY SSF143430 7 92 5.89E-12 T 11-10-2018 YH65_04845 2e96abbc0118f124cecfcd00b6be3342 110 Hamap MF_01471 CRISPR-associated endoribonuclease Cas2 [cas2]. 7 103 14.301 T 11-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 YH65_04845 2e96abbc0118f124cecfcd00b6be3342 110 Gene3D G3DSA:3.30.70.240 4 104 6.0E-5 T 11-10-2018 YH65_04845 2e96abbc0118f124cecfcd00b6be3342 110 Pfam PF09827 CRISPR associated protein Cas2 7 89 4.7E-16 T 11-10-2018 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 YH65_04845 2e96abbc0118f124cecfcd00b6be3342 110 TIGRFAM TIGR01573 cas2: CRISPR-associated endonuclease Cas2 7 100 8.0E-17 T 11-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 YH65_01290 c550d4ec87637e8b4a4eff861b5fa06d 426 ProSitePatterns PS01244 Aconitase family signature 2. 359 372 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 YH65_01290 c550d4ec87637e8b4a4eff861b5fa06d 426 Hamap MF_01027 3-isopropylmalate dehydratase large subunit [leuC]. 3 426 47.273 T 11-10-2018 IPR011826 Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 YH65_01290 c550d4ec87637e8b4a4eff861b5fa06d 426 Pfam PF00330 Aconitase family (aconitate hydratase) 7 418 1.8E-92 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 YH65_01290 c550d4ec87637e8b4a4eff861b5fa06d 426 ProSitePatterns PS00450 Aconitase family signature 1. 299 315 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 YH65_01290 c550d4ec87637e8b4a4eff861b5fa06d 426 TIGRFAM TIGR01343 hacA_fam: homoaconitate hydratase family protein 4 424 1.6E-168 T 11-10-2018 IPR006251 Homoaconitase/3-isopropylmalate dehydratase, large subunit GO:0008652|GO:0016836|GO:0051539 KEGG: 00290+4.2.1.33 YH65_01290 c550d4ec87637e8b4a4eff861b5fa06d 426 TIGRFAM TIGR02083 LEU2: 3-isopropylmalate dehydratase, large subunit 4 426 7.3E-185 T 11-10-2018 IPR011823 3-isopropylmalate dehydratase, large subunit, bacteria GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 YH65_01290 c550d4ec87637e8b4a4eff861b5fa06d 426 PRINTS PR00415 Aconitase family signature 127 142 2.7E-22 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 YH65_01290 c550d4ec87637e8b4a4eff861b5fa06d 426 PRINTS PR00415 Aconitase family signature 359 372 2.7E-22 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 YH65_01290 c550d4ec87637e8b4a4eff861b5fa06d 426 PRINTS PR00415 Aconitase family signature 189 202 2.7E-22 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 YH65_01290 c550d4ec87637e8b4a4eff861b5fa06d 426 PRINTS PR00415 Aconitase family signature 303 314 2.7E-22 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 YH65_01290 c550d4ec87637e8b4a4eff861b5fa06d 426 PRINTS PR00415 Aconitase family signature 203 216 2.7E-22 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 YH65_01290 c550d4ec87637e8b4a4eff861b5fa06d 426 PRINTS PR00415 Aconitase family signature 113 126 2.7E-22 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 YH65_01290 c550d4ec87637e8b4a4eff861b5fa06d 426 TIGRFAM TIGR02086 IPMI_arch: 3-isopropylmalate dehydratase, large subunit 3 425 1.6E-155 T 11-10-2018 IPR011826 Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 YH65_01290 c550d4ec87637e8b4a4eff861b5fa06d 426 Gene3D G3DSA:3.30.499.10 278 426 7.6E-54 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 YH65_01290 c550d4ec87637e8b4a4eff861b5fa06d 426 Gene3D G3DSA:3.30.499.20 4 275 1.6E-93 T 11-10-2018 YH65_01290 c550d4ec87637e8b4a4eff861b5fa06d 426 SUPERFAMILY SSF53732 1 425 1.16E-137 T 11-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 YH65_09075 aa98bb3f938c99df1c9073685f7e5bf2 127 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 95 19.934 T 11-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 YH65_09075 aa98bb3f938c99df1c9073685f7e5bf2 127 Pfam PF01250 Ribosomal protein S6 4 92 8.4E-26 T 11-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_09075 aa98bb3f938c99df1c9073685f7e5bf2 127 SUPERFAMILY SSF54995 1 93 1.31E-29 T 11-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_09075 aa98bb3f938c99df1c9073685f7e5bf2 127 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 2.4E-24 T 11-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_09075 aa98bb3f938c99df1c9073685f7e5bf2 127 Gene3D G3DSA:3.30.70.60 1 104 3.0E-30 T 11-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 YH65_03555 d1ae6a6ad14fa2ebe4716115b56194fa 176 Pfam PF00227 Proteasome subunit 2 173 3.5E-21 T 11-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 YH65_03555 d1ae6a6ad14fa2ebe4716115b56194fa 176 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 5 175 9.4E-73 T 11-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 YH65_03555 d1ae6a6ad14fa2ebe4716115b56194fa 176 SUPERFAMILY SSF56235 2 175 1.3E-49 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal YH65_03555 d1ae6a6ad14fa2ebe4716115b56194fa 176 Gene3D G3DSA:3.60.20.10 1 176 2.0E-54 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal YH65_03555 d1ae6a6ad14fa2ebe4716115b56194fa 176 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 4 176 38.087 T 11-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 YH65_07815 8f1477e7807dff3a719d27e6c401a7e3 378 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 33 257 2.9E-17 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YH65_07815 8f1477e7807dff3a719d27e6c401a7e3 378 SUPERFAMILY SSF111369 51 216 3.92E-8 T 11-10-2018 YH65_07815 8f1477e7807dff3a719d27e6c401a7e3 378 Gene3D G3DSA:2.40.420.20 28 296 1.5E-32 T 11-10-2018 YH65_07815 8f1477e7807dff3a719d27e6c401a7e3 378 Gene3D G3DSA:1.10.287.470 84 156 1.5E-32 T 11-10-2018 YH65_07815 8f1477e7807dff3a719d27e6c401a7e3 378 Gene3D G3DSA:2.40.30.170 36 270 1.5E-32 T 11-10-2018 YH65_07815 8f1477e7807dff3a719d27e6c401a7e3 378 Gene3D G3DSA:2.40.50.100 50 193 1.5E-32 T 11-10-2018 YH65_07235 ab4283177594dd04167bdd2da353d2e4 234 Gene3D G3DSA:3.40.50.720 1 142 2.6E-24 T 11-10-2018 YH65_07235 ab4283177594dd04167bdd2da353d2e4 234 SUPERFAMILY SSF51735 4 143 6.12E-23 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily YH65_07235 ab4283177594dd04167bdd2da353d2e4 234 Gene3D G3DSA:3.30.70.1450 155 231 7.5E-6 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 YH65_07235 ab4283177594dd04167bdd2da353d2e4 234 Pfam PF02254 TrkA-N domain 6 120 1.2E-21 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 YH65_07235 ab4283177594dd04167bdd2da353d2e4 234 SUPERFAMILY SSF116726 146 227 2.09E-6 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 YH65_04495 622fff1c4f3cd921aec9863247328408 149 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 5 145 3.2E-56 T 11-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 YH65_04495 622fff1c4f3cd921aec9863247328408 149 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 3 148 34.139 T 11-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 YH65_04495 622fff1c4f3cd921aec9863247328408 149 Gene3D G3DSA:3.10.129.10 1 149 1.2E-57 T 11-10-2018 YH65_04495 622fff1c4f3cd921aec9863247328408 149 Pfam PF07977 FabA-like domain 12 141 1.1E-37 T 11-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 YH65_04495 622fff1c4f3cd921aec9863247328408 149 SUPERFAMILY SSF54637 3 146 3.66E-47 T 11-10-2018 IPR029069 HotDog domain superfamily YH65_03170 21d7df47649117b1ff5a0f5c2bf86038 373 Hamap MF_01454 GTPase Obg [obg]. 1 362 43.949 T 11-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 YH65_03170 21d7df47649117b1ff5a0f5c2bf86038 373 Pfam PF01926 50S ribosome-binding GTPase 160 262 3.1E-24 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 YH65_03170 21d7df47649117b1ff5a0f5c2bf86038 373 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 2 304 2.6E-119 T 11-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 YH65_03170 21d7df47649117b1ff5a0f5c2bf86038 373 PIRSF PIRSF002401 1 318 2.6E-119 T 11-10-2018 IPR035101 GTP-binding protein, Obg-type YH65_03170 21d7df47649117b1ff5a0f5c2bf86038 373 Gene3D G3DSA:2.70.210.12 1 157 3.6E-50 T 11-10-2018 IPR036726 GTP1/OBG domain superfamily YH65_03170 21d7df47649117b1ff5a0f5c2bf86038 373 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 182 200 4.9E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 YH65_03170 21d7df47649117b1ff5a0f5c2bf86038 373 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 210 225 4.9E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 YH65_03170 21d7df47649117b1ff5a0f5c2bf86038 373 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 227 245 4.9E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 YH65_03170 21d7df47649117b1ff5a0f5c2bf86038 373 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 161 181 4.9E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 YH65_03170 21d7df47649117b1ff5a0f5c2bf86038 373 ProSitePatterns PS00905 GTP1/OBG family signature. 212 225 - T 11-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 YH65_03170 21d7df47649117b1ff5a0f5c2bf86038 373 SUPERFAMILY SSF82051 1 157 1.57E-48 T 11-10-2018 IPR036726 GTP1/OBG domain superfamily YH65_03170 21d7df47649117b1ff5a0f5c2bf86038 373 SUPERFAMILY SSF52540 151 365 5.72E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_03170 21d7df47649117b1ff5a0f5c2bf86038 373 Pfam PF01018 GTP1/OBG 3 157 7.9E-51 T 11-10-2018 IPR006169 GTP1/OBG domain YH65_03170 21d7df47649117b1ff5a0f5c2bf86038 373 Gene3D G3DSA:3.40.50.300 159 327 9.1E-42 T 11-10-2018 YH65_02580 d1972495a604959cafc4566ceab126cb 513 PRINTS PR00097 Anthranilate synthase component II signature 166 179 5.6E-5 T 11-10-2018 YH65_02580 d1972495a604959cafc4566ceab126cb 513 PRINTS PR00097 Anthranilate synthase component II signature 77 88 5.6E-5 T 11-10-2018 YH65_02580 d1972495a604959cafc4566ceab126cb 513 PRINTS PR00097 Anthranilate synthase component II signature 50 59 5.6E-5 T 11-10-2018 YH65_02580 d1972495a604959cafc4566ceab126cb 513 SUPERFAMILY SSF52402 182 434 4.63E-54 T 11-10-2018 YH65_02580 d1972495a604959cafc4566ceab126cb 513 Pfam PF00958 GMP synthase C terminal domain 421 512 2.8E-43 T 11-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 YH65_02580 d1972495a604959cafc4566ceab126cb 513 SUPERFAMILY SSF54810 393 513 2.48E-50 T 11-10-2018 YH65_02580 d1972495a604959cafc4566ceab126cb 513 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 6 194 1.0E-77 T 11-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 YH65_02580 d1972495a604959cafc4566ceab126cb 513 Pfam PF02540 NAD synthase 210 289 3.6E-9 T 11-10-2018 IPR022310 NAD/GMP synthase YH65_02580 d1972495a604959cafc4566ceab126cb 513 PRINTS PR00096 Glutamine amidotransferase superfamily signature 50 59 8.1E-7 T 11-10-2018 YH65_02580 d1972495a604959cafc4566ceab126cb 513 PRINTS PR00096 Glutamine amidotransferase superfamily signature 166 179 8.1E-7 T 11-10-2018 YH65_02580 d1972495a604959cafc4566ceab126cb 513 PRINTS PR00096 Glutamine amidotransferase superfamily signature 77 88 8.1E-7 T 11-10-2018 YH65_02580 d1972495a604959cafc4566ceab126cb 513 Gene3D G3DSA:3.40.50.880 2 194 7.1E-57 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like YH65_02580 d1972495a604959cafc4566ceab126cb 513 SUPERFAMILY SSF52317 6 226 4.92E-59 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like YH65_02580 d1972495a604959cafc4566ceab126cb 513 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 3 513 53.273 T 11-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 YH65_02580 d1972495a604959cafc4566ceab126cb 513 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 47 61 1.1E-5 T 11-10-2018 YH65_02580 d1972495a604959cafc4566ceab126cb 513 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 6 20 1.1E-5 T 11-10-2018 YH65_02580 d1972495a604959cafc4566ceab126cb 513 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 77 93 1.1E-5 T 11-10-2018 YH65_02580 d1972495a604959cafc4566ceab126cb 513 Gene3D G3DSA:3.30.300.10 394 513 1.3E-51 T 11-10-2018 YH65_02580 d1972495a604959cafc4566ceab126cb 513 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 202 513 1.2E-145 T 11-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 YH65_02580 d1972495a604959cafc4566ceab126cb 513 Pfam PF00117 Glutamine amidotransferase class-I 8 187 7.4E-45 T 11-10-2018 IPR017926 Glutamine amidotransferase YH65_02580 d1972495a604959cafc4566ceab126cb 513 Gene3D G3DSA:3.40.50.620 198 393 5.6E-77 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YH65_10695 5d67dd476997737bac01228e234b87ed 116 Gene3D G3DSA:3.90.1030.10 1 116 2.1E-43 T 11-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_10695 5d67dd476997737bac01228e234b87ed 116 TIGRFAM TIGR00059 L17: ribosomal protein bL17 6 116 2.7E-44 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_10695 5d67dd476997737bac01228e234b87ed 116 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 25.475 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_10695 5d67dd476997737bac01228e234b87ed 116 Pfam PF01196 Ribosomal protein L17 20 116 1.6E-33 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_10695 5d67dd476997737bac01228e234b87ed 116 SUPERFAMILY SSF64263 1 116 2.35E-44 T 11-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_01695 8193132b5170dc7181827596a83e4329 1141 SUPERFAMILY SSF53067 10 282 5.81E-30 T 11-10-2018 YH65_01695 8193132b5170dc7181827596a83e4329 1141 Gene3D G3DSA:3.30.420.40 106 269 2.3E-55 T 11-10-2018 YH65_01695 8193132b5170dc7181827596a83e4329 1141 Gene3D G3DSA:3.30.420.40 12 282 2.3E-55 T 11-10-2018 YH65_01695 8193132b5170dc7181827596a83e4329 1141 Pfam PF09989 CoA enzyme activase uncharacterised domain (DUF2229) 767 997 6.5E-48 T 11-10-2018 IPR018709 CoA enzyme activase, domain of unknown function DUF2229 YH65_01695 8193132b5170dc7181827596a83e4329 1141 SUPERFAMILY SSF53067 350 611 6.31E-32 T 11-10-2018 YH65_01695 8193132b5170dc7181827596a83e4329 1141 Gene3D G3DSA:3.30.420.40 447 595 6.8E-64 T 11-10-2018 YH65_01695 8193132b5170dc7181827596a83e4329 1141 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 351 612 5.5E-42 T 11-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 YH65_01695 8193132b5170dc7181827596a83e4329 1141 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 12 233 5.9E-24 T 11-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 YH65_01695 8193132b5170dc7181827596a83e4329 1141 Gene3D G3DSA:3.30.420.40 351 612 6.8E-64 T 11-10-2018 YH65_07350 bbf798bb9eaa0c2d3686e8ca1f5cea77 241 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 241 23.766 T 11-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 YH65_07350 bbf798bb9eaa0c2d3686e8ca1f5cea77 241 Pfam PF02654 Cobalamin-5-phosphate synthase 4 233 3.3E-31 T 11-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 YH65_08935 d40ab141fad23f98cfeb64385be73239 180 Gene3D G3DSA:3.40.50.11670 1 180 9.5E-65 T 11-10-2018 IPR038381 DNA replication regulator HobA superfamily YH65_08935 d40ab141fad23f98cfeb64385be73239 180 Pfam PF12163 DNA replication regulator 1 180 2.7E-76 T 11-10-2018 IPR021011 DNA replication regulator, HobA YH65_07990 4e842333b97f7d01037779d9bd861d54 389 Gene3D G3DSA:3.30.1330.20 229 340 3.1E-32 T 11-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 YH65_07990 4e842333b97f7d01037779d9bd861d54 389 Pfam PF12327 FtsZ family, C-terminal domain 230 326 7.2E-25 T 11-10-2018 IPR024757 Cell division protein FtsZ, C-terminal YH65_07990 4e842333b97f7d01037779d9bd861d54 389 SUPERFAMILY SSF52490 18 211 5.49E-63 T 11-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 YH65_07990 4e842333b97f7d01037779d9bd861d54 389 PRINTS PR00423 Cell division protein FtsZ signature 132 153 7.6E-39 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 YH65_07990 4e842333b97f7d01037779d9bd861d54 389 PRINTS PR00423 Cell division protein FtsZ signature 220 241 7.6E-39 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 YH65_07990 4e842333b97f7d01037779d9bd861d54 389 PRINTS PR00423 Cell division protein FtsZ signature 104 124 7.6E-39 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 YH65_07990 4e842333b97f7d01037779d9bd861d54 389 PRINTS PR00423 Cell division protein FtsZ signature 195 217 7.6E-39 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 YH65_07990 4e842333b97f7d01037779d9bd861d54 389 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 5 348 4.0E-119 T 11-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 YH65_07990 4e842333b97f7d01037779d9bd861d54 389 SUPERFAMILY SSF55307 214 328 5.04E-39 T 11-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 YH65_07990 4e842333b97f7d01037779d9bd861d54 389 SMART SM00865 215 334 5.2E-50 T 11-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 YH65_07990 4e842333b97f7d01037779d9bd861d54 389 SMART SM00864 19 211 4.7E-103 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 YH65_07990 4e842333b97f7d01037779d9bd861d54 389 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 19 179 1.0E-37 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 YH65_07990 4e842333b97f7d01037779d9bd861d54 389 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 15 352 35.378 T 11-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 YH65_07990 4e842333b97f7d01037779d9bd861d54 389 ProSitePatterns PS01135 FtsZ protein signature 2. 103 124 - T 11-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 YH65_07990 4e842333b97f7d01037779d9bd861d54 389 Gene3D G3DSA:3.40.50.1440 9 228 5.2E-73 T 11-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 YH65_00605 ec4cafeaa366ac15e67d891339f4b86e 387 Gene3D G3DSA:3.30.300.20 296 387 2.1E-18 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta YH65_00605 ec4cafeaa366ac15e67d891339f4b86e 387 SUPERFAMILY SSF54814 216 293 1.96E-26 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 YH65_00605 ec4cafeaa366ac15e67d891339f4b86e 387 SUPERFAMILY SSF69705 3 127 3.79E-21 T 11-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 YH65_00605 ec4cafeaa366ac15e67d891339f4b86e 387 Gene3D G3DSA:2.40.50.140 150 208 7.8E-9 T 11-10-2018 YH65_00605 ec4cafeaa366ac15e67d891339f4b86e 387 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 357 3.3E-97 T 11-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 YH65_00605 ec4cafeaa366ac15e67d891339f4b86e 387 Gene3D G3DSA:3.30.1480.10 1 140 1.5E-17 T 11-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 YH65_00605 ec4cafeaa366ac15e67d891339f4b86e 387 SUPERFAMILY SSF50249 147 205 7.81E-7 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold YH65_00605 ec4cafeaa366ac15e67d891339f4b86e 387 Pfam PF08529 NusA N-terminal domain 4 133 4.1E-17 T 11-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 YH65_00605 ec4cafeaa366ac15e67d891339f4b86e 387 Pfam PF13184 NusA-like KH domain 246 313 2.3E-22 T 11-10-2018 IPR025249 KH domain, NusA-like GO:0003723 YH65_00605 ec4cafeaa366ac15e67d891339f4b86e 387 SUPERFAMILY SSF54814 297 357 9.81E-10 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 YH65_00605 ec4cafeaa366ac15e67d891339f4b86e 387 Gene3D G3DSA:3.30.300.20 215 293 2.2E-28 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta YH65_00605 ec4cafeaa366ac15e67d891339f4b86e 387 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 1 386 23.166 T 11-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 YH65_03110 e7923185b3dc238bb0ea097206613a49 447 SUPERFAMILY SSF75304 43 445 1.44E-134 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 YH65_03110 e7923185b3dc238bb0ea097206613a49 447 ProSitePatterns PS00571 Amidases signature. 122 153 - T 11-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 YH65_03110 e7923185b3dc238bb0ea097206613a49 447 Gene3D G3DSA:3.90.1300.10 2 447 1.9E-164 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 YH65_03110 e7923185b3dc238bb0ea097206613a49 447 Pfam PF01425 Amidase 42 432 1.8E-143 T 11-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 YH65_03110 e7923185b3dc238bb0ea097206613a49 447 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 24 443 2.6E-176 T 11-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 YH65_03110 e7923185b3dc238bb0ea097206613a49 447 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 4 444 81.685 T 11-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 YH65_06290 83b0f5afb406fe5a06e137c4562aad47 222 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 219 6.0E-18 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YH65_06290 83b0f5afb406fe5a06e137c4562aad47 222 SMART SM00448 3 114 1.7E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YH65_06290 83b0f5afb406fe5a06e137c4562aad47 222 Pfam PF00072 Response regulator receiver domain 5 114 5.2E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YH65_06290 83b0f5afb406fe5a06e137c4562aad47 222 Gene3D G3DSA:3.40.50.2300 1 123 3.3E-31 T 11-10-2018 YH65_06290 83b0f5afb406fe5a06e137c4562aad47 222 SUPERFAMILY SSF46894 124 220 9.64E-20 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YH65_06290 83b0f5afb406fe5a06e137c4562aad47 222 SUPERFAMILY SSF52172 2 128 4.55E-33 T 11-10-2018 IPR011006 CheY-like superfamily YH65_06290 83b0f5afb406fe5a06e137c4562aad47 222 Gene3D G3DSA:1.10.10.10 125 221 1.7E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YH65_06290 83b0f5afb406fe5a06e137c4562aad47 222 SMART SM00862 148 219 2.2E-18 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YH65_07280 4e26beb55cbbeb30c5efafe0c03e6880 82 SUPERFAMILY SSF55174 1 66 4.58E-16 T 11-10-2018 YH65_07280 4e26beb55cbbeb30c5efafe0c03e6880 82 SMART SM00363 1 60 4.5E-6 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_07280 4e26beb55cbbeb30c5efafe0c03e6880 82 PIRSF PIRSF038881 1 82 9.7E-23 T 11-10-2018 IPR025490 RNA-binding protein, HP1423 type YH65_07280 4e26beb55cbbeb30c5efafe0c03e6880 82 Pfam PF01479 S4 domain 1 47 2.9E-7 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_07280 4e26beb55cbbeb30c5efafe0c03e6880 82 Gene3D G3DSA:3.10.290.10 1 82 2.1E-21 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 YH65_06725 df451bf163e85478a6448301e466e1f0 429 Gene3D G3DSA:3.40.50.300 2 172 9.0E-32 T 11-10-2018 YH65_06725 df451bf163e85478a6448301e466e1f0 429 Pfam PF02689 Helicase 338 399 8.0E-7 T 11-10-2018 IPR003840 DNA helicase GO:0004386|GO:0005524 YH65_06725 df451bf163e85478a6448301e466e1f0 429 SUPERFAMILY SSF52540 129 411 6.74E-31 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_06725 df451bf163e85478a6448301e466e1f0 429 SMART SM00382 12 320 3.9E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain YH65_06725 df451bf163e85478a6448301e466e1f0 429 SUPERFAMILY SSF52540 9 166 2.98E-24 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_06725 df451bf163e85478a6448301e466e1f0 429 Pfam PF05970 PIF1-like helicase 6 201 3.5E-29 T 11-10-2018 IPR010285 DNA helicase Pif1-like GO:0000723|GO:0003678|GO:0006281 YH65_06725 df451bf163e85478a6448301e466e1f0 429 Gene3D G3DSA:3.40.50.300 287 392 1.8E-6 T 11-10-2018 YH65_08875 3e040c0647260b9d0577a5e00a775507 265 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 8 88 7.9E-24 T 11-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 YH65_08875 3e040c0647260b9d0577a5e00a775507 265 SUPERFAMILY SSF53223 4 100 2.19E-30 T 11-10-2018 YH65_08875 3e040c0647260b9d0577a5e00a775507 265 SUPERFAMILY SSF51735 101 261 6.22E-29 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily YH65_08875 3e040c0647260b9d0577a5e00a775507 265 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 3 261 28.713 T 11-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 YH65_08875 3e040c0647260b9d0577a5e00a775507 265 Gene3D G3DSA:3.40.50.720 101 237 6.2E-74 T 11-10-2018 YH65_08875 3e040c0647260b9d0577a5e00a775507 265 Gene3D G3DSA:3.40.50.10860 6 245 6.2E-74 T 11-10-2018 YH65_08875 3e040c0647260b9d0577a5e00a775507 265 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 5 263 1.2E-66 T 11-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 YH65_09940 aab0cd7deb1b11589eab82eca0bd7d26 270 Gene3D G3DSA:3.40.1010.10 1 115 5.3E-34 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 YH65_09940 aab0cd7deb1b11589eab82eca0bd7d26 270 Gene3D G3DSA:3.30.950.10 116 229 3.3E-32 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 YH65_09940 aab0cd7deb1b11589eab82eca0bd7d26 270 SUPERFAMILY SSF53790 1 223 1.44E-66 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 YH65_09940 aab0cd7deb1b11589eab82eca0bd7d26 270 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 85 96 - T 11-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 YH65_09940 aab0cd7deb1b11589eab82eca0bd7d26 270 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 1 206 8.8E-30 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 YH65_09940 aab0cd7deb1b11589eab82eca0bd7d26 270 PIRSF PIRSF005917 1 270 1.2E-79 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 YH65_09940 aab0cd7deb1b11589eab82eca0bd7d26 270 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 1 225 32.089 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 YH65_09940 aab0cd7deb1b11589eab82eca0bd7d26 270 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 1 266 2.5E-76 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 YH65_01460 00e8d574c66631fc65810c89a8d8ddeb 241 Pfam PF01583 Adenylylsulphate kinase 72 222 9.9E-43 T 11-10-2018 YH65_01460 00e8d574c66631fc65810c89a8d8ddeb 241 Gene3D G3DSA:3.40.50.300 52 241 1.4E-48 T 11-10-2018 YH65_01460 00e8d574c66631fc65810c89a8d8ddeb 241 Pfam PF09834 Predicted membrane protein (DUF2061) 10 61 6.4E-17 T 11-10-2018 IPR018638 Domain of unknown function DUF2061, membrane YH65_01460 00e8d574c66631fc65810c89a8d8ddeb 241 SUPERFAMILY SSF52540 71 237 3.14E-29 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_01460 00e8d574c66631fc65810c89a8d8ddeb 241 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 65 234 3.1E-45 T 11-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 YH65_09000 d9625f3483bf5ae666c1cc7c7daf5851 258 SUPERFAMILY SSF102405 14 178 6.87E-28 T 11-10-2018 YH65_09000 d9625f3483bf5ae666c1cc7c7daf5851 258 Pfam PF02481 DNA recombination-mediator protein A 11 196 9.7E-54 T 11-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 YH65_09000 d9625f3483bf5ae666c1cc7c7daf5851 258 Gene3D G3DSA:3.40.50.450 7 216 1.4E-61 T 11-10-2018 YH65_09090 059d1392f31cccd6562e3dccfb3a528a 234 Gene3D G3DSA:2.20.25.110 139 197 8.8E-33 T 11-10-2018 YH65_09090 059d1392f31cccd6562e3dccfb3a528a 234 Gene3D G3DSA:3.40.50.150 33 213 8.8E-33 T 11-10-2018 YH65_09090 059d1392f31cccd6562e3dccfb3a528a 234 SUPERFAMILY SSF53335 27 205 3.87E-29 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YH65_09090 059d1392f31cccd6562e3dccfb3a528a 234 Pfam PF13489 Methyltransferase domain 38 171 2.1E-13 T 11-10-2018 YH65_00080 e1d311abb5ef182a29bc31b3410069ef 301 Gene3D G3DSA:1.10.10.10 1 87 8.4E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YH65_00080 e1d311abb5ef182a29bc31b3410069ef 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.5E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YH65_00080 e1d311abb5ef182a29bc31b3410069ef 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.5E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YH65_00080 e1d311abb5ef182a29bc31b3410069ef 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.5E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YH65_00080 e1d311abb5ef182a29bc31b3410069ef 301 Pfam PF03466 LysR substrate binding domain 88 287 7.4E-38 T 11-10-2018 IPR005119 LysR, substrate-binding YH65_00080 e1d311abb5ef182a29bc31b3410069ef 301 SUPERFAMILY SSF46785 3 110 8.35E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YH65_00080 e1d311abb5ef182a29bc31b3410069ef 301 Gene3D G3DSA:3.40.190.290 90 297 9.7E-36 T 11-10-2018 YH65_00080 e1d311abb5ef182a29bc31b3410069ef 301 SUPERFAMILY SSF53850 88 287 3.1E-33 T 11-10-2018 YH65_00080 e1d311abb5ef182a29bc31b3410069ef 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 8.8E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YH65_08960 9f87a849be8573a44585cf4bb9e94d12 347 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 134 304 3.5E-55 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 YH65_08960 9f87a849be8573a44585cf4bb9e94d12 347 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 3 318 17.4 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 YH65_08960 9f87a849be8573a44585cf4bb9e94d12 347 ProSitePatterns PS01218 TatC family signature. 232 251 - T 11-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site YH65_08960 9f87a849be8573a44585cf4bb9e94d12 347 Pfam PF00902 Sec-independent protein translocase protein (TatC) 8 299 2.5E-68 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 YH65_01420 04e300aeb0fcb949ab25a8ce4185dc2f 398 Pfam PF07687 Peptidase dimerisation domain 191 281 2.4E-10 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain YH65_01420 04e300aeb0fcb949ab25a8ce4185dc2f 398 Gene3D G3DSA:3.40.630.10 19 378 2.9E-130 T 11-10-2018 YH65_01420 04e300aeb0fcb949ab25a8ce4185dc2f 398 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 20 381 1.4E-112 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 YH65_01420 04e300aeb0fcb949ab25a8ce4185dc2f 398 PIRSF PIRSF005962 3 397 1.5E-124 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 YH65_01420 04e300aeb0fcb949ab25a8ce4185dc2f 398 SUPERFAMILY SSF53187 6 395 2.99E-78 T 11-10-2018 YH65_01420 04e300aeb0fcb949ab25a8ce4185dc2f 398 SUPERFAMILY SSF55031 186 303 3.53E-29 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain YH65_01420 04e300aeb0fcb949ab25a8ce4185dc2f 398 Gene3D G3DSA:3.30.70.360 186 300 2.9E-130 T 11-10-2018 YH65_01420 04e300aeb0fcb949ab25a8ce4185dc2f 398 Pfam PF01546 Peptidase family M20/M25/M40 77 385 2.8E-33 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 YH65_04920 fdfbc5589202c17fb3fff03eb43d3f85 400 SUPERFAMILY SSF55973 2 112 2.83E-28 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 YH65_04920 fdfbc5589202c17fb3fff03eb43d3f85 400 SUPERFAMILY SSF55973 248 397 1.44E-44 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 YH65_04920 fdfbc5589202c17fb3fff03eb43d3f85 400 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 3 396 2.4E-98 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 YH65_04920 fdfbc5589202c17fb3fff03eb43d3f85 400 Gene3D G3DSA:3.30.300.10 108 392 5.9E-116 T 11-10-2018 YH65_04920 fdfbc5589202c17fb3fff03eb43d3f85 400 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 248 388 1.1E-46 T 11-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 YH65_04920 fdfbc5589202c17fb3fff03eb43d3f85 400 Gene3D G3DSA:3.30.300.10 4 245 5.9E-116 T 11-10-2018 YH65_04920 fdfbc5589202c17fb3fff03eb43d3f85 400 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 120 130 - T 11-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 YH65_04920 fdfbc5589202c17fb3fff03eb43d3f85 400 PIRSF PIRSF000497 1 399 2.2E-122 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 YH65_04920 fdfbc5589202c17fb3fff03eb43d3f85 400 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 2 106 3.9E-27 T 11-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 YH65_04920 fdfbc5589202c17fb3fff03eb43d3f85 400 Pfam PF02772 S-adenosylmethionine synthetase, central domain 118 242 3.5E-21 T 11-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 YH65_04920 fdfbc5589202c17fb3fff03eb43d3f85 400 Gene3D G3DSA:3.30.300.10 9 282 5.9E-116 T 11-10-2018 YH65_04920 fdfbc5589202c17fb3fff03eb43d3f85 400 SUPERFAMILY SSF55973 117 243 7.06E-23 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 YH65_10650 66e245e96af67a19b5ba425d84d8f672 132 SUPERFAMILY SSF52080 4 131 7.59E-35 T 11-10-2018 IPR036227 Ribosomal L18e/L15P superfamily YH65_10650 66e245e96af67a19b5ba425d84d8f672 132 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 129 14.813 T 11-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 YH65_10650 66e245e96af67a19b5ba425d84d8f672 132 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 3 131 4.4E-44 T 11-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_10650 66e245e96af67a19b5ba425d84d8f672 132 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 130 2.6E-23 T 11-10-2018 IPR021131 Ribosomal protein L18e/L15P YH65_00585 bf81c1e54950430900b340cd156c8200 188 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 11 187 4.3E-40 T 11-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 YH65_00585 bf81c1e54950430900b340cd156c8200 188 Gene3D G3DSA:3.40.50.620 6 187 7.2E-42 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YH65_00585 bf81c1e54950430900b340cd156c8200 188 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 7 186 20.971 T 11-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 YH65_00585 bf81c1e54950430900b340cd156c8200 188 Pfam PF01467 Cytidylyltransferase-like 11 164 9.2E-23 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 YH65_00585 bf81c1e54950430900b340cd156c8200 188 SUPERFAMILY SSF52374 9 165 4.83E-37 T 11-10-2018 YH65_00585 bf81c1e54950430900b340cd156c8200 188 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 9 62 5.1E-12 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 YH65_08835 77b594e48082044263c426a074240df1 117 Gene3D G3DSA:3.60.21.10 1 52 2.2E-16 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like YH65_08835 77b594e48082044263c426a074240df1 117 Gene3D G3DSA:3.60.21.10 53 113 7.4E-6 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like YH65_08835 77b594e48082044263c426a074240df1 117 Pfam PF00149 Calcineurin-like phosphoesterase 2 54 4.0E-7 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 YH65_08835 77b594e48082044263c426a074240df1 117 SUPERFAMILY SSF56300 2 51 1.6E-16 T 11-10-2018 YH65_09065 ae0ded24f0b47cb4a0c742c48965ec41 660 Pfam PF00773 RNB domain 215 538 1.1E-94 T 11-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 YH65_09065 ae0ded24f0b47cb4a0c742c48965ec41 660 ProSitePatterns PS01175 Ribonuclease II family signature. 506 530 - T 11-10-2018 IPR022966 Ribonuclease II/R, conserved site YH65_09065 ae0ded24f0b47cb4a0c742c48965ec41 660 SMART SM00955 215 539 8.0E-137 T 11-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 YH65_09065 ae0ded24f0b47cb4a0c742c48965ec41 660 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 50 594 6.4E-113 T 11-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 YH65_09065 ae0ded24f0b47cb4a0c742c48965ec41 660 SUPERFAMILY SSF50249 176 580 5.57E-110 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold YH65_01105 e032b963dafcf8965de71a8c94c200f2 665 PIRSF PIRSF006402 14 664 9.6E-175 T 11-10-2018 IPR024705 Spermatogenesis-associated protein 20 YH65_01105 e032b963dafcf8965de71a8c94c200f2 665 Gene3D G3DSA:1.50.10.10 227 343 8.3E-6 T 11-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 YH65_01105 e032b963dafcf8965de71a8c94c200f2 665 SUPERFAMILY SSF52833 20 150 4.94E-32 T 11-10-2018 IPR036249 Thioredoxin-like superfamily YH65_01105 e032b963dafcf8965de71a8c94c200f2 665 SUPERFAMILY SSF48208 195 531 1.3E-48 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 YH65_01105 e032b963dafcf8965de71a8c94c200f2 665 Pfam PF03190 Protein of unknown function, DUF255 22 169 3.9E-59 T 11-10-2018 IPR004879 Domain of unknown function DUF255 YH65_01105 e032b963dafcf8965de71a8c94c200f2 665 Gene3D G3DSA:3.40.30.10 20 192 5.0E-59 T 11-10-2018 YH65_05315 7d8b8a9f23e3ec9e6be5c1a25f192f88 327 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 1 320 41.942 T 11-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 YH65_05315 7d8b8a9f23e3ec9e6be5c1a25f192f88 327 ProSitePatterns PS00433 Phosphofructokinase signature. 245 263 - T 11-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 YH65_05315 7d8b8a9f23e3ec9e6be5c1a25f192f88 327 Gene3D G3DSA:3.40.50.450 3 287 1.2E-99 T 11-10-2018 YH65_05315 7d8b8a9f23e3ec9e6be5c1a25f192f88 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 6 25 2.0E-65 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 YH65_05315 7d8b8a9f23e3ec9e6be5c1a25f192f88 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 93 109 2.0E-65 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 YH65_05315 7d8b8a9f23e3ec9e6be5c1a25f192f88 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 160 176 2.0E-65 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 YH65_05315 7d8b8a9f23e3ec9e6be5c1a25f192f88 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 214 226 2.0E-65 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 YH65_05315 7d8b8a9f23e3ec9e6be5c1a25f192f88 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 178 195 2.0E-65 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 YH65_05315 7d8b8a9f23e3ec9e6be5c1a25f192f88 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 31 44 2.0E-65 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 YH65_05315 7d8b8a9f23e3ec9e6be5c1a25f192f88 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 122 139 2.0E-65 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 YH65_05315 7d8b8a9f23e3ec9e6be5c1a25f192f88 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 241 263 2.0E-65 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 YH65_05315 7d8b8a9f23e3ec9e6be5c1a25f192f88 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 140 158 2.0E-65 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 YH65_05315 7d8b8a9f23e3ec9e6be5c1a25f192f88 327 Pfam PF00365 Phosphofructokinase 3 276 1.0E-95 T 11-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 YH65_05315 7d8b8a9f23e3ec9e6be5c1a25f192f88 327 Gene3D G3DSA:3.40.50.460 144 253 1.2E-99 T 11-10-2018 YH65_05315 7d8b8a9f23e3ec9e6be5c1a25f192f88 327 PIRSF PIRSF000532 1 321 4.0E-95 T 11-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 YH65_05315 7d8b8a9f23e3ec9e6be5c1a25f192f88 327 SUPERFAMILY SSF53784 1 314 3.14E-96 T 11-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 YH65_01195 6034030f51624a7a777bc04e63410020 141 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 141 28.588 T 11-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 YH65_01195 6034030f51624a7a777bc04e63410020 141 SUPERFAMILY SSF54747 3 71 8.24E-29 T 11-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily YH65_01195 6034030f51624a7a777bc04e63410020 141 SUPERFAMILY SSF46906 67 139 3.4E-21 T 11-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily YH65_01195 6034030f51624a7a777bc04e63410020 141 Pfam PF00298 Ribosomal protein L11, RNA binding domain 71 139 1.3E-18 T 11-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 YH65_01195 6034030f51624a7a777bc04e63410020 141 Gene3D G3DSA:3.30.1550.10 2 71 2.5E-32 T 11-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily YH65_01195 6034030f51624a7a777bc04e63410020 141 SMART SM00649 9 140 6.4E-71 T 11-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 YH65_01195 6034030f51624a7a777bc04e63410020 141 Pfam PF03946 Ribosomal protein L11, N-terminal domain 10 66 2.3E-29 T 11-10-2018 IPR020784 Ribosomal protein L11, N-terminal YH65_01195 6034030f51624a7a777bc04e63410020 141 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 73 1.0E-11 T 11-10-2018 YH65_01195 6034030f51624a7a777bc04e63410020 141 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 7.7E-57 T 11-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_01195 6034030f51624a7a777bc04e63410020 141 Gene3D G3DSA:1.10.10.250 72 139 1.2E-21 T 11-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily YH65_01195 6034030f51624a7a777bc04e63410020 141 ProSitePatterns PS00359 Ribosomal protein L11 signature. 126 141 - T 11-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_03115 eabdf71b1d5d6baaab87b33c8f7aa29e 481 SMART SM01240 6 468 0.0 T 11-10-2018 YH65_03115 eabdf71b1d5d6baaab87b33c8f7aa29e 481 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 7 448 4.7E-190 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 YH65_03115 eabdf71b1d5d6baaab87b33c8f7aa29e 481 SUPERFAMILY SSF54631 62 202 4.41E-34 T 11-10-2018 YH65_03115 eabdf71b1d5d6baaab87b33c8f7aa29e 481 Pfam PF00571 CBS domain 149 199 2.8E-10 T 11-10-2018 IPR000644 CBS domain YH65_03115 eabdf71b1d5d6baaab87b33c8f7aa29e 481 Pfam PF00571 CBS domain 95 138 2.3E-10 T 11-10-2018 IPR000644 CBS domain YH65_03115 eabdf71b1d5d6baaab87b33c8f7aa29e 481 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 7 468 2.1E-160 T 11-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 YH65_03115 eabdf71b1d5d6baaab87b33c8f7aa29e 481 SMART SM00116 95 143 1.5E-11 T 11-10-2018 IPR000644 CBS domain YH65_03115 eabdf71b1d5d6baaab87b33c8f7aa29e 481 SMART SM00116 156 204 9.8E-12 T 11-10-2018 IPR000644 CBS domain YH65_03115 eabdf71b1d5d6baaab87b33c8f7aa29e 481 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 7 481 86.047 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 YH65_03115 eabdf71b1d5d6baaab87b33c8f7aa29e 481 PIRSF PIRSF000130 1 481 1.6E-207 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 YH65_03115 eabdf71b1d5d6baaab87b33c8f7aa29e 481 Gene3D G3DSA:3.20.20.70 1 481 2.7E-217 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YH65_03115 eabdf71b1d5d6baaab87b33c8f7aa29e 481 SUPERFAMILY SSF51412 3 472 3.53E-121 T 11-10-2018 YH65_03115 eabdf71b1d5d6baaab87b33c8f7aa29e 481 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 290 302 - T 11-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 YH65_10175 1fa8b108f1e9916e2b0711b33dcbc366 372 Pfam PF00117 Glutamine amidotransferase class-I 192 370 4.5E-42 T 11-10-2018 IPR017926 Glutamine amidotransferase YH65_10175 1fa8b108f1e9916e2b0711b33dcbc366 372 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 129 5.5E-46 T 11-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 YH65_10175 1fa8b108f1e9916e2b0711b33dcbc366 372 PRINTS PR00096 Glutamine amidotransferase superfamily signature 347 360 1.5E-11 T 11-10-2018 YH65_10175 1fa8b108f1e9916e2b0711b33dcbc366 372 PRINTS PR00096 Glutamine amidotransferase superfamily signature 263 274 1.5E-11 T 11-10-2018 YH65_10175 1fa8b108f1e9916e2b0711b33dcbc366 372 PRINTS PR00096 Glutamine amidotransferase superfamily signature 235 244 1.5E-11 T 11-10-2018 YH65_10175 1fa8b108f1e9916e2b0711b33dcbc366 372 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 371 7.3E-138 T 11-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 YH65_10175 1fa8b108f1e9916e2b0711b33dcbc366 372 Gene3D G3DSA:3.50.30.20 1 148 8.3E-49 T 11-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 YH65_10175 1fa8b108f1e9916e2b0711b33dcbc366 372 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 189 203 1.6E-33 T 11-10-2018 YH65_10175 1fa8b108f1e9916e2b0711b33dcbc366 372 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 232 246 1.6E-33 T 11-10-2018 YH65_10175 1fa8b108f1e9916e2b0711b33dcbc366 372 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 305 316 1.6E-33 T 11-10-2018 YH65_10175 1fa8b108f1e9916e2b0711b33dcbc366 372 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 263 279 1.6E-33 T 11-10-2018 YH65_10175 1fa8b108f1e9916e2b0711b33dcbc366 372 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 280 297 1.6E-33 T 11-10-2018 YH65_10175 1fa8b108f1e9916e2b0711b33dcbc366 372 Gene3D G3DSA:3.40.50.880 150 372 3.5E-61 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like YH65_10175 1fa8b108f1e9916e2b0711b33dcbc366 372 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 2 372 43.973 T 11-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 YH65_10175 1fa8b108f1e9916e2b0711b33dcbc366 372 PRINTS PR00097 Anthranilate synthase component II signature 347 360 5.0E-6 T 11-10-2018 YH65_10175 1fa8b108f1e9916e2b0711b33dcbc366 372 PRINTS PR00097 Anthranilate synthase component II signature 263 274 5.0E-6 T 11-10-2018 YH65_10175 1fa8b108f1e9916e2b0711b33dcbc366 372 PRINTS PR00097 Anthranilate synthase component II signature 235 244 5.0E-6 T 11-10-2018 YH65_10175 1fa8b108f1e9916e2b0711b33dcbc366 372 SUPERFAMILY SSF52317 180 371 3.4E-50 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like YH65_10175 1fa8b108f1e9916e2b0711b33dcbc366 372 SMART SM01097 2 132 1.7E-75 T 11-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 YH65_10175 1fa8b108f1e9916e2b0711b33dcbc366 372 SUPERFAMILY SSF52021 2 146 1.57E-50 T 11-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 YH65_04345 a6ce12fc7b9c76c01f909ad6313c9aa6 531 SUPERFAMILY SSF52540 2 241 5.96E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_04345 a6ce12fc7b9c76c01f909ad6313c9aa6 531 SMART SM00382 346 512 1.9E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain YH65_04345 a6ce12fc7b9c76c01f909ad6313c9aa6 531 SMART SM00382 26 235 5.9E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain YH65_04345 a6ce12fc7b9c76c01f909ad6313c9aa6 531 Pfam PF00005 ABC transporter 337 468 5.3E-22 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YH65_04345 a6ce12fc7b9c76c01f909ad6313c9aa6 531 Gene3D G3DSA:3.40.50.300 2 285 1.4E-57 T 11-10-2018 YH65_04345 a6ce12fc7b9c76c01f909ad6313c9aa6 531 Pfam PF12848 ABC transporter 226 309 3.6E-18 T 11-10-2018 IPR032781 ABC-transporter extension domain YH65_04345 a6ce12fc7b9c76c01f909ad6313c9aa6 531 Pfam PF00005 ABC transporter 18 186 5.6E-24 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YH65_04345 a6ce12fc7b9c76c01f909ad6313c9aa6 531 Gene3D G3DSA:3.40.50.300 286 531 2.1E-56 T 11-10-2018 YH65_04345 a6ce12fc7b9c76c01f909ad6313c9aa6 531 SUPERFAMILY SSF52540 300 522 4.06E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_03535 87cfa39d34fbd2ede89a495f226d5018 447 Pfam PF00764 Arginosuccinate synthase 10 396 8.7E-156 T 11-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 YH65_03535 87cfa39d34fbd2ede89a495f226d5018 447 Gene3D G3DSA:3.90.1260.10 181 407 7.0E-100 T 11-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 YH65_03535 87cfa39d34fbd2ede89a495f226d5018 447 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 12 20 - T 11-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 YH65_03535 87cfa39d34fbd2ede89a495f226d5018 447 SUPERFAMILY SSF52402 8 171 9.08E-45 T 11-10-2018 YH65_03535 87cfa39d34fbd2ede89a495f226d5018 447 Gene3D G3DSA:3.40.50.620 7 179 5.9E-65 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YH65_03535 87cfa39d34fbd2ede89a495f226d5018 447 SUPERFAMILY SSF69864 179 401 8.76E-96 T 11-10-2018 YH65_03535 87cfa39d34fbd2ede89a495f226d5018 447 TIGRFAM TIGR00032 argG: argininosuccinate synthase 8 397 7.0E-145 T 11-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 YH65_03535 87cfa39d34fbd2ede89a495f226d5018 447 Hamap MF_00005 Argininosuccinate synthase [argG]. 6 404 51.754 T 11-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 YH65_03535 87cfa39d34fbd2ede89a495f226d5018 447 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 122 133 - T 11-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 YH65_02645 3a33912ca595e3e36b50293301785566 422 Gene3D G3DSA:3.30.1490.20 117 186 5.8E-24 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 YH65_02645 3a33912ca595e3e36b50293301785566 422 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 99 291 1.9E-75 T 11-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 YH65_02645 3a33912ca595e3e36b50293301785566 422 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 326 419 1.5E-20 T 11-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 YH65_02645 3a33912ca595e3e36b50293301785566 422 Gene3D G3DSA:3.40.50.20 2 91 7.6E-30 T 11-10-2018 YH65_02645 3a33912ca595e3e36b50293301785566 422 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 421 3.3E-148 T 11-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 YH65_02645 3a33912ca595e3e36b50293301785566 422 SUPERFAMILY SSF52440 1 99 1.44E-30 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily YH65_02645 3a33912ca595e3e36b50293301785566 422 SMART SM01209 99 291 9.5E-121 T 11-10-2018 YH65_02645 3a33912ca595e3e36b50293301785566 422 SMART SM01210 325 422 1.1E-36 T 11-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 YH65_02645 3a33912ca595e3e36b50293301785566 422 SUPERFAMILY SSF51246 323 422 1.18E-24 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 YH65_02645 3a33912ca595e3e36b50293301785566 422 Gene3D G3DSA:3.30.470.20 187 325 2.4E-51 T 11-10-2018 YH65_02645 3a33912ca595e3e36b50293301785566 422 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 285 292 - T 11-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 YH65_02645 3a33912ca595e3e36b50293301785566 422 Gene3D G3DSA:3.90.600.10 326 422 1.0E-22 T 11-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 YH65_02645 3a33912ca595e3e36b50293301785566 422 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 422 39.388 T 11-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 YH65_02645 3a33912ca595e3e36b50293301785566 422 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 98 2.6E-31 T 11-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 YH65_02645 3a33912ca595e3e36b50293301785566 422 SUPERFAMILY SSF56059 100 317 1.77E-58 T 11-10-2018 YH65_02200 e0f9b665768120cf2604b36cb9004d3b 518 Gene3D G3DSA:3.20.20.70 1 276 1.2E-102 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YH65_02200 e0f9b665768120cf2604b36cb9004d3b 518 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 3 510 41.908 T 11-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 YH65_02200 e0f9b665768120cf2604b36cb9004d3b 518 SUPERFAMILY SSF110921 395 499 1.27E-17 T 11-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 YH65_02200 e0f9b665768120cf2604b36cb9004d3b 518 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 6 498 3.7E-210 T 11-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 YH65_02200 e0f9b665768120cf2604b36cb9004d3b 518 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 198 211 - T 11-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 YH65_02200 e0f9b665768120cf2604b36cb9004d3b 518 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 13 29 - T 11-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 YH65_02200 e0f9b665768120cf2604b36cb9004d3b 518 Pfam PF08502 LeuA allosteric (dimerisation) domain 371 500 1.1E-27 T 11-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 YH65_02200 e0f9b665768120cf2604b36cb9004d3b 518 SMART SM00917 370 501 1.5E-28 T 11-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 YH65_02200 e0f9b665768120cf2604b36cb9004d3b 518 SUPERFAMILY SSF51569 3 291 4.94E-95 T 11-10-2018 YH65_02200 e0f9b665768120cf2604b36cb9004d3b 518 Pfam PF00682 HMGL-like 6 272 1.4E-98 T 11-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 YH65_02200 e0f9b665768120cf2604b36cb9004d3b 518 Gene3D G3DSA:3.30.160.270 393 501 1.8E-6 T 11-10-2018 YH65_02200 e0f9b665768120cf2604b36cb9004d3b 518 Gene3D G3DSA:1.10.238.260 282 392 2.7E-36 T 11-10-2018 YH65_03380 273d662e47a1d6013c9c2a5e25d6328c 369 SUPERFAMILY SSF51412 8 360 6.87E-49 T 11-10-2018 YH65_03380 273d662e47a1d6013c9c2a5e25d6328c 369 Pfam PF03060 Nitronate monooxygenase 5 365 4.2E-81 T 11-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 YH65_03380 273d662e47a1d6013c9c2a5e25d6328c 369 Gene3D G3DSA:3.20.20.70 9 369 8.3E-65 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YH65_03160 3a52dc6affda235316dc5fb39912d150 84 PRINTS PR00063 Ribosomal protein L27 signature 54 78 2.8E-38 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_03160 3a52dc6affda235316dc5fb39912d150 84 PRINTS PR00063 Ribosomal protein L27 signature 29 53 2.8E-38 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_03160 3a52dc6affda235316dc5fb39912d150 84 PRINTS PR00063 Ribosomal protein L27 signature 4 28 2.8E-38 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_03160 3a52dc6affda235316dc5fb39912d150 84 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 3.7E-38 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_03160 3a52dc6affda235316dc5fb39912d150 84 SUPERFAMILY SSF110324 2 83 2.84E-34 T 11-10-2018 YH65_03160 3a52dc6affda235316dc5fb39912d150 84 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 11-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YH65_03160 3a52dc6affda235316dc5fb39912d150 84 Pfam PF01016 Ribosomal L27 protein 2 81 1.1E-37 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_03160 3a52dc6affda235316dc5fb39912d150 84 Gene3D G3DSA:2.40.50.100 20 84 9.8E-32 T 11-10-2018 YH65_03160 3a52dc6affda235316dc5fb39912d150 84 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 84 27.853 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_03160 3a52dc6affda235316dc5fb39912d150 84 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 84 6.0E-14 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_07390 3bc71388d60e5350ea190d3bdef20db3 238 SUPERFAMILY SSF46626 160 236 1.43E-10 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_07390 3bc71388d60e5350ea190d3bdef20db3 238 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 164 233 1.2E-5 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YH65_07390 3bc71388d60e5350ea190d3bdef20db3 238 Gene3D G3DSA:1.10.760.10 20 134 1.1E-6 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_07390 3bc71388d60e5350ea190d3bdef20db3 238 Gene3D G3DSA:1.10.760.10 157 237 3.7E-15 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_07390 3bc71388d60e5350ea190d3bdef20db3 238 Pfam PF00034 Cytochrome c 32 131 1.5E-4 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YH65_07390 3bc71388d60e5350ea190d3bdef20db3 238 SUPERFAMILY SSF46626 6 134 3.41E-12 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_03475 862720dcfc27c475a51cf5d7da6f5b7a 126 Pfam PF03692 Putative zinc- or iron-chelating domain 19 114 3.3E-13 T 11-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein YH65_02500 9d193bceabe18615a0250f77c8457bb4 177 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 122 176 3.0E-8 T 11-10-2018 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal YH65_02500 9d193bceabe18615a0250f77c8457bb4 177 SUPERFAMILY SSF69754 4 101 5.36E-22 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like YH65_02500 9d193bceabe18615a0250f77c8457bb4 177 Gene3D G3DSA:3.30.505.50 134 177 2.6E-6 T 11-10-2018 IPR038416 Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily YH65_02500 9d193bceabe18615a0250f77c8457bb4 177 Gene3D G3DSA:3.30.160.100 1 111 2.0E-20 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like YH65_02500 9d193bceabe18615a0250f77c8457bb4 177 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 5 98 2.0E-18 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 YH65_02500 9d193bceabe18615a0250f77c8457bb4 177 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 101 1.4E-17 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 YH65_02455 53a2ad52ec9662537ea22a92876b0e58 396 Gene3D G3DSA:3.30.70.100 286 383 1.6E-19 T 11-10-2018 YH65_02455 53a2ad52ec9662537ea22a92876b0e58 396 SUPERFAMILY SSF82861 132 217 5.1E-12 T 11-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 YH65_02455 53a2ad52ec9662537ea22a92876b0e58 396 SUPERFAMILY SSF82689 285 389 2.75E-20 T 11-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 YH65_02455 53a2ad52ec9662537ea22a92876b0e58 396 Gene3D G3DSA:2.30.30.60 235 285 8.0E-15 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily YH65_02455 53a2ad52ec9662537ea22a92876b0e58 396 SUPERFAMILY SSF50182 218 284 8.83E-16 T 11-10-2018 IPR010920 LSM domain superfamily YH65_02455 53a2ad52ec9662537ea22a92876b0e58 396 Pfam PF00924 Mechanosensitive ion channel 177 378 2.0E-62 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 YH65_00400 6d9131dadc04664b3a70f97626ffc2c2 374 Gene3D G3DSA:2.30.40.10 9 370 9.4E-132 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 YH65_00400 6d9131dadc04664b3a70f97626ffc2c2 374 SUPERFAMILY SSF51338 2 373 2.49E-14 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 YH65_00400 6d9131dadc04664b3a70f97626ffc2c2 374 Pfam PF01979 Amidohydrolase family 48 370 3.5E-33 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 YH65_00400 6d9131dadc04664b3a70f97626ffc2c2 374 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 5 368 2.8E-109 T 11-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 YH65_00400 6d9131dadc04664b3a70f97626ffc2c2 374 PIRSF PIRSF038994 1 374 7.9E-125 T 11-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 YH65_00400 6d9131dadc04664b3a70f97626ffc2c2 374 Gene3D G3DSA:3.20.20.140 52 342 9.4E-132 T 11-10-2018 YH65_00400 6d9131dadc04664b3a70f97626ffc2c2 374 SUPERFAMILY SSF51556 52 341 2.36E-92 T 11-10-2018 IPR032466 Metal-dependent hydrolase YH65_05880 2c9457cc6d07934612ed7386b49d9350 425 Gene3D G3DSA:3.30.390.10 3 128 3.4E-53 T 11-10-2018 IPR029017 Enolase-like, N-terminal YH65_05880 2c9457cc6d07934612ed7386b49d9350 425 PIRSF PIRSF001400 2 425 2.3E-180 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YH65_05880 2c9457cc6d07934612ed7386b49d9350 425 Pfam PF00113 Enolase, C-terminal TIM barrel domain 143 423 4.2E-110 T 11-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YH65_05880 2c9457cc6d07934612ed7386b49d9350 425 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 6 423 7.8E-188 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YH65_05880 2c9457cc6d07934612ed7386b49d9350 425 PRINTS PR00148 Enolase signature 339 353 5.3E-42 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YH65_05880 2c9457cc6d07934612ed7386b49d9350 425 PRINTS PR00148 Enolase signature 316 327 5.3E-42 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YH65_05880 2c9457cc6d07934612ed7386b49d9350 425 PRINTS PR00148 Enolase signature 39 53 5.3E-42 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YH65_05880 2c9457cc6d07934612ed7386b49d9350 425 PRINTS PR00148 Enolase signature 163 176 5.3E-42 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YH65_05880 2c9457cc6d07934612ed7386b49d9350 425 PRINTS PR00148 Enolase signature 109 125 5.3E-42 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YH65_05880 2c9457cc6d07934612ed7386b49d9350 425 PRINTS PR00148 Enolase signature 368 385 5.3E-42 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YH65_05880 2c9457cc6d07934612ed7386b49d9350 425 SMART SM01192 141 425 4.1E-178 T 11-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YH65_05880 2c9457cc6d07934612ed7386b49d9350 425 Gene3D G3DSA:3.20.20.120 130 425 1.1E-122 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily YH65_05880 2c9457cc6d07934612ed7386b49d9350 425 SUPERFAMILY SSF51604 141 423 2.45E-112 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily YH65_05880 2c9457cc6d07934612ed7386b49d9350 425 Pfam PF03952 Enolase, N-terminal domain 6 136 1.3E-57 T 11-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YH65_05880 2c9457cc6d07934612ed7386b49d9350 425 Hamap MF_00318 Enolase [eno]. 4 416 41.691 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YH65_05880 2c9457cc6d07934612ed7386b49d9350 425 SUPERFAMILY SSF54826 5 139 3.83E-52 T 11-10-2018 YH65_05880 2c9457cc6d07934612ed7386b49d9350 425 SMART SM01193 6 136 3.7E-87 T 11-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YH65_05880 2c9457cc6d07934612ed7386b49d9350 425 ProSitePatterns PS00164 Enolase signature. 339 352 - T 11-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YH65_09785 df3b83717c457d38ffcb5a020a88c3ba 484 Pfam PF02386 Cation transport protein 40 262 1.9E-33 T 11-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 YH65_09785 df3b83717c457d38ffcb5a020a88c3ba 484 Pfam PF02386 Cation transport protein 300 477 4.0E-23 T 11-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 YH65_09785 df3b83717c457d38ffcb5a020a88c3ba 484 PIRSF PIRSF006247 1 483 1.9E-157 T 11-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 YH65_08700 dedbfbf49e2b38c387c528b7137c55b5 304 Gene3D G3DSA:3.60.15.10 22 257 2.3E-40 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like YH65_08700 dedbfbf49e2b38c387c528b7137c55b5 304 SUPERFAMILY SSF56281 20 283 6.02E-46 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like YH65_08700 dedbfbf49e2b38c387c528b7137c55b5 304 SMART SM00849 48 231 1.5E-13 T 11-10-2018 IPR001279 Metallo-beta-lactamase YH65_08700 dedbfbf49e2b38c387c528b7137c55b5 304 Pfam PF00753 Metallo-beta-lactamase superfamily 45 231 4.1E-17 T 11-10-2018 IPR001279 Metallo-beta-lactamase YH65_01665 cd1df49c13a03a7cbc1ea8dea56b6618 260 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 122 189 5.4E-19 T 11-10-2018 IPR004606 Molybdenum-pterin binding GO:0015689 YH65_01665 cd1df49c13a03a7cbc1ea8dea56b6618 260 Gene3D G3DSA:2.40.50.100 122 189 2.1E-22 T 11-10-2018 YH65_01665 cd1df49c13a03a7cbc1ea8dea56b6618 260 Gene3D G3DSA:2.40.50.100 196 259 1.5E-10 T 11-10-2018 YH65_01665 cd1df49c13a03a7cbc1ea8dea56b6618 260 SUPERFAMILY SSF46785 3 106 1.02E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YH65_01665 cd1df49c13a03a7cbc1ea8dea56b6618 260 PIRSF PIRSF005763 1 260 3.5E-73 T 11-10-2018 IPR016462 Molybdate-dependent transcriptional regulator ModE GO:0006355|GO:0015689|GO:0030151 YH65_01665 cd1df49c13a03a7cbc1ea8dea56b6618 260 Gene3D G3DSA:1.10.10.10 1 106 5.9E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YH65_01665 cd1df49c13a03a7cbc1ea8dea56b6618 260 SUPERFAMILY SSF50331 197 259 5.1E-10 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal YH65_01665 cd1df49c13a03a7cbc1ea8dea56b6618 260 Pfam PF03459 TOBE domain 125 185 2.7E-13 T 11-10-2018 IPR005116 Transport-associated OB, type 1 YH65_01665 cd1df49c13a03a7cbc1ea8dea56b6618 260 Pfam PF03459 TOBE domain 197 257 4.2E-7 T 11-10-2018 IPR005116 Transport-associated OB, type 1 YH65_01665 cd1df49c13a03a7cbc1ea8dea56b6618 260 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 20 82 1.8E-11 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YH65_01665 cd1df49c13a03a7cbc1ea8dea56b6618 260 SUPERFAMILY SSF50331 122 193 1.23E-18 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal YH65_05210 aa3945a12c0c44b908c5976b0e71c26e 749 SMART SM00845 603 748 3.3E-68 T 11-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 YH65_05210 aa3945a12c0c44b908c5976b0e71c26e 749 Gene3D G3DSA:2.40.240.10 338 540 4.5E-73 T 11-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 YH65_05210 aa3945a12c0c44b908c5976b0e71c26e 749 Pfam PF02637 GatB domain 604 748 6.8E-47 T 11-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 YH65_05210 aa3945a12c0c44b908c5976b0e71c26e 749 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 23 334 3.6E-106 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 YH65_05210 aa3945a12c0c44b908c5976b0e71c26e 749 SUPERFAMILY SSF50715 337 542 2.41E-62 T 11-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 YH65_05210 aa3945a12c0c44b908c5976b0e71c26e 749 SUPERFAMILY SSF89095 572 627 7.06E-6 T 11-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 YH65_05210 aa3945a12c0c44b908c5976b0e71c26e 749 Gene3D G3DSA:1.10.150.380 575 686 2.4E-28 T 11-10-2018 YH65_05210 aa3945a12c0c44b908c5976b0e71c26e 749 Gene3D G3DSA:1.10.1160.10 258 336 1.8E-31 T 11-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 YH65_05210 aa3945a12c0c44b908c5976b0e71c26e 749 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 30 41 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 YH65_05210 aa3945a12c0c44b908c5976b0e71c26e 749 SUPERFAMILY SSF52374 24 343 9.78E-92 T 11-10-2018 YH65_05210 aa3945a12c0c44b908c5976b0e71c26e 749 SUPERFAMILY SSF89095 619 748 4.71E-23 T 11-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 YH65_05210 aa3945a12c0c44b908c5976b0e71c26e 749 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 338 522 2.1E-55 T 11-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 YH65_05210 aa3945a12c0c44b908c5976b0e71c26e 749 Gene3D G3DSA:2.40.240.10 345 462 4.5E-73 T 11-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 YH65_05210 aa3945a12c0c44b908c5976b0e71c26e 749 Gene3D G3DSA:3.40.50.620 24 244 2.0E-98 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YH65_05210 aa3945a12c0c44b908c5976b0e71c26e 749 PRINTS PR00987 Glutamyl-tRNA synthetase signature 27 39 2.4E-8 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 YH65_05210 aa3945a12c0c44b908c5976b0e71c26e 749 PRINTS PR00987 Glutamyl-tRNA synthetase signature 41 52 2.4E-8 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 YH65_05210 aa3945a12c0c44b908c5976b0e71c26e 749 PRINTS PR00987 Glutamyl-tRNA synthetase signature 206 216 2.4E-8 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 YH65_05210 aa3945a12c0c44b908c5976b0e71c26e 749 PRINTS PR00987 Glutamyl-tRNA synthetase signature 56 69 2.4E-8 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 YH65_05210 aa3945a12c0c44b908c5976b0e71c26e 749 Gene3D G3DSA:3.90.800.10 97 205 2.0E-98 T 11-10-2018 YH65_05210 aa3945a12c0c44b908c5976b0e71c26e 749 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 24 545 4.7E-215 T 11-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 YH65_05210 aa3945a12c0c44b908c5976b0e71c26e 749 Gene3D G3DSA:1.10.10.410 688 749 2.1E-23 T 11-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal YH65_01700 a07d4fe0606ea757f5ebeb6cf4d5359f 261 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 8 258 3.4E-46 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 YH65_01700 a07d4fe0606ea757f5ebeb6cf4d5359f 261 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 10 253 5.0E-69 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 YH65_01700 a07d4fe0606ea757f5ebeb6cf4d5359f 261 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 7 258 16.431 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 YH65_02530 9339af1b1212b47ac9d6f0e727b347e4 214 Gene3D G3DSA:1.25.40.10 34 194 1.5E-13 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YH65_02530 9339af1b1212b47ac9d6f0e727b347e4 214 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 4 184 6.1E-25 T 11-10-2018 IPR017689 Outer membrane protein assembly factor BamD YH65_02530 9339af1b1212b47ac9d6f0e727b347e4 214 Pfam PF13525 Outer membrane lipoprotein 34 184 1.3E-16 T 11-10-2018 IPR039565 Outer membrane lipoprotein BamD-like YH65_04865 f5ce62bc2710a523cae87033fd0f2d7c 209 SMART SM00934 2 202 5.0E-46 T 11-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 YH65_04865 f5ce62bc2710a523cae87033fd0f2d7c 209 Gene3D G3DSA:3.20.20.70 1 207 4.6E-77 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YH65_04865 f5ce62bc2710a523cae87033fd0f2d7c 209 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 2 202 8.8E-31 T 11-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 YH65_04865 f5ce62bc2710a523cae87033fd0f2d7c 209 SUPERFAMILY SSF51366 2 207 1.33E-41 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 YH65_04865 f5ce62bc2710a523cae87033fd0f2d7c 209 TIGRFAM TIGR03128 RuMP_HxlA: 3-hexulose-6-phosphate synthase 2 206 7.2E-81 T 11-10-2018 IPR017553 3-hexulose-6-phosphate synthase GO:0005975|GO:0043801 KEGG: 00030+4.1.2.43|KEGG: 00680+4.1.2.43|MetaCyc: PWY-1861|MetaCyc: PWY-7796 YH65_00785 7b5496e7f1b7ca9efef4fa5fb453ec37 245 Gene3D G3DSA:3.30.70.2050 128 197 2.3E-10 T 11-10-2018 YH65_00785 7b5496e7f1b7ca9efef4fa5fb453ec37 245 Pfam PF05573 NosL 63 168 1.2E-15 T 11-10-2018 IPR008719 Nitrous oxide reductase accessory protein NosL YH65_00785 7b5496e7f1b7ca9efef4fa5fb453ec37 245 SUPERFAMILY SSF160387 84 187 1.23E-28 T 11-10-2018 YH65_04050 09daf262fcdff82353a4fcbea2187b0d 476 Gene3D G3DSA:3.30.470.20 183 276 6.5E-19 T 11-10-2018 YH65_04050 09daf262fcdff82353a4fcbea2187b0d 476 Pfam PF08443 RimK-like ATP-grasp domain 108 255 6.6E-17 T 11-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 YH65_04050 09daf262fcdff82353a4fcbea2187b0d 476 Gene3D G3DSA:3.30.1490.20 100 182 5.8E-5 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 YH65_04050 09daf262fcdff82353a4fcbea2187b0d 476 SUPERFAMILY SSF56059 90 266 1.01E-35 T 11-10-2018 YH65_04050 09daf262fcdff82353a4fcbea2187b0d 476 Gene3D G3DSA:1.10.150.20 408 474 1.9E-6 T 11-10-2018 YH65_04050 09daf262fcdff82353a4fcbea2187b0d 476 SUPERFAMILY SSF47781 408 471 4.0E-7 T 11-10-2018 IPR010994 RuvA domain 2-like YH65_08060 4b8794b64dbb7769bc19eed9d138f1e7 487 Gene3D G3DSA:1.10.3210.10 292 462 1.8E-19 T 11-10-2018 YH65_08060 4b8794b64dbb7769bc19eed9d138f1e7 487 SMART SM00322 175 242 2.0E-4 T 11-10-2018 IPR004087 K Homology domain GO:0003676 YH65_08060 4b8794b64dbb7769bc19eed9d138f1e7 487 TIGRFAM TIGR00277 HDIG: HDIG domain 299 376 9.6E-23 T 11-10-2018 IPR006675 HDIG domain YH65_08060 4b8794b64dbb7769bc19eed9d138f1e7 487 SUPERFAMILY SSF109604 274 436 2.09E-29 T 11-10-2018 YH65_08060 4b8794b64dbb7769bc19eed9d138f1e7 487 TIGRFAM TIGR03319 RNase_Y: ribonuclease Y 10 487 4.7E-174 T 11-10-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 YH65_08060 4b8794b64dbb7769bc19eed9d138f1e7 487 Pfam PF00013 KH domain 183 233 1.5E-5 T 11-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 YH65_08060 4b8794b64dbb7769bc19eed9d138f1e7 487 SMART SM00471 299 405 1.5E-12 T 11-10-2018 IPR003607 HD/PDEase domain YH65_08060 4b8794b64dbb7769bc19eed9d138f1e7 487 Pfam PF01966 HD domain 305 395 1.2E-18 T 11-10-2018 IPR006674 HD domain YH65_08060 4b8794b64dbb7769bc19eed9d138f1e7 487 Pfam PF12072 Domain of unknown function (DUF3552) 12 171 9.7E-15 T 11-10-2018 IPR022711 Ribonuclease Y, N-terminal YH65_08060 4b8794b64dbb7769bc19eed9d138f1e7 487 Gene3D G3DSA:3.30.1370.10 177 270 5.7E-8 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 YH65_08060 4b8794b64dbb7769bc19eed9d138f1e7 487 Hamap MF_00335 Ribonuclease Y [rny]. 14 487 21.971 T 11-10-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 YH65_08060 4b8794b64dbb7769bc19eed9d138f1e7 487 SUPERFAMILY SSF54791 175 270 8.49E-14 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 YH65_04020 1877f446fc006b3a5ba7be270ebb968b 603 SUPERFAMILY SSF52540 4 235 1.87E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_04020 1877f446fc006b3a5ba7be270ebb968b 603 Gene3D G3DSA:3.40.50.300 7 190 9.7E-71 T 11-10-2018 YH65_04020 1877f446fc006b3a5ba7be270ebb968b 603 Pfam PF00009 Elongation factor Tu GTP binding domain 8 186 2.5E-53 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YH65_04020 1877f446fc006b3a5ba7be270ebb968b 603 SUPERFAMILY SSF54980 405 500 7.67E-25 T 11-10-2018 IPR035647 EF-G domain III/V-like YH65_04020 1877f446fc006b3a5ba7be270ebb968b 603 Gene3D G3DSA:3.30.70.870 292 373 2.8E-35 T 11-10-2018 YH65_04020 1877f446fc006b3a5ba7be270ebb968b 603 Gene3D G3DSA:3.30.70.2570 486 560 1.2E-27 T 11-10-2018 IPR038363 LepA, C-terminal domain superfamily YH65_04020 1877f446fc006b3a5ba7be270ebb968b 603 Hamap MF_00071 Elongation factor 4 [lepA]. 1 603 283.89 T 11-10-2018 IPR006297 Elongation factor 4 GO:0005525 YH65_04020 1877f446fc006b3a5ba7be270ebb968b 603 PRINTS PR00315 GTP-binding elongation factor signature 12 25 4.4E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YH65_04020 1877f446fc006b3a5ba7be270ebb968b 603 PRINTS PR00315 GTP-binding elongation factor signature 95 106 4.4E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YH65_04020 1877f446fc006b3a5ba7be270ebb968b 603 PRINTS PR00315 GTP-binding elongation factor signature 79 89 4.4E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YH65_04020 1877f446fc006b3a5ba7be270ebb968b 603 PRINTS PR00315 GTP-binding elongation factor signature 55 63 4.4E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YH65_04020 1877f446fc006b3a5ba7be270ebb968b 603 PRINTS PR00315 GTP-binding elongation factor signature 131 140 4.4E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YH65_04020 1877f446fc006b3a5ba7be270ebb968b 603 Pfam PF06421 GTP-binding protein LepA C-terminus 495 600 3.4E-45 T 11-10-2018 IPR013842 GTP-binding protein LepA, C-terminal YH65_04020 1877f446fc006b3a5ba7be270ebb968b 603 SMART SM00838 404 492 0.0016 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like YH65_04020 1877f446fc006b3a5ba7be270ebb968b 603 Gene3D G3DSA:3.30.70.3380 374 485 1.3E-43 T 11-10-2018 YH65_04020 1877f446fc006b3a5ba7be270ebb968b 603 Pfam PF00679 Elongation factor G C-terminus 405 491 5.7E-24 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like YH65_04020 1877f446fc006b3a5ba7be270ebb968b 603 SUPERFAMILY SSF54980 297 376 1.83E-17 T 11-10-2018 IPR035647 EF-G domain III/V-like YH65_04020 1877f446fc006b3a5ba7be270ebb968b 603 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site YH65_04020 1877f446fc006b3a5ba7be270ebb968b 603 TIGRFAM TIGR01393 lepA: elongation factor 4 9 602 2.7E-292 T 11-10-2018 IPR006297 Elongation factor 4 GO:0005525 YH65_04020 1877f446fc006b3a5ba7be270ebb968b 603 Pfam PF03144 Elongation factor Tu domain 2 210 281 2.5E-9 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 YH65_04020 1877f446fc006b3a5ba7be270ebb968b 603 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 11 181 2.6E-18 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 YH65_04020 1877f446fc006b3a5ba7be270ebb968b 603 Gene3D G3DSA:2.40.30.10 191 291 4.8E-29 T 11-10-2018 YH65_06430 d03bf4514057733d225d848fcf4d506b 1035 Gene3D G3DSA:1.20.1640.10 500 1012 1.3E-224 T 11-10-2018 YH65_06430 d03bf4514057733d225d848fcf4d506b 1035 Gene3D G3DSA:3.30.2090.10 713 800 1.3E-224 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YH65_06430 d03bf4514057733d225d848fcf4d506b 1035 Gene3D G3DSA:3.30.70.1440 666 856 1.3E-224 T 11-10-2018 YH65_06430 d03bf4514057733d225d848fcf4d506b 1035 Gene3D G3DSA:3.30.70.1320 131 319 1.3E-224 T 11-10-2018 YH65_06430 d03bf4514057733d225d848fcf4d506b 1035 Gene3D G3DSA:3.30.70.1430 560 665 1.3E-224 T 11-10-2018 YH65_06430 d03bf4514057733d225d848fcf4d506b 1035 Gene3D G3DSA:3.30.2090.10 177 263 1.3E-224 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YH65_06430 d03bf4514057733d225d848fcf4d506b 1035 SUPERFAMILY SSF82714 182 260 1.57E-10 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YH65_06430 d03bf4514057733d225d848fcf4d506b 1035 SUPERFAMILY SSF82693 39 127 2.41E-15 T 11-10-2018 YH65_06430 d03bf4514057733d225d848fcf4d506b 1035 SUPERFAMILY SSF82866 285 484 5.36E-40 T 11-10-2018 YH65_06430 d03bf4514057733d225d848fcf4d506b 1035 SUPERFAMILY SSF82693 137 306 7.85E-13 T 11-10-2018 YH65_06430 d03bf4514057733d225d848fcf4d506b 1035 Gene3D G3DSA:1.20.1640.10 8 499 1.3E-224 T 11-10-2018 YH65_06430 d03bf4514057733d225d848fcf4d506b 1035 SUPERFAMILY SSF82714 716 797 1.83E-7 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YH65_06430 d03bf4514057733d225d848fcf4d506b 1035 Pfam PF00873 AcrB/AcrD/AcrF family 1 1012 2.4E-166 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_06430 d03bf4514057733d225d848fcf4d506b 1035 Gene3D G3DSA:3.30.70.1430 38 808 1.3E-224 T 11-10-2018 YH65_06430 d03bf4514057733d225d848fcf4d506b 1035 SUPERFAMILY SSF82866 824 1020 1.16E-41 T 11-10-2018 YH65_06430 d03bf4514057733d225d848fcf4d506b 1035 PRINTS PR00702 Acriflavin resistance protein family signature 323 346 2.8E-35 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_06430 d03bf4514057733d225d848fcf4d506b 1035 PRINTS PR00702 Acriflavin resistance protein family signature 432 455 2.8E-35 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_06430 d03bf4514057733d225d848fcf4d506b 1035 PRINTS PR00702 Acriflavin resistance protein family signature 378 402 2.8E-35 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_06430 d03bf4514057733d225d848fcf4d506b 1035 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 2.8E-35 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_06430 d03bf4514057733d225d848fcf4d506b 1035 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 2.8E-35 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_06430 d03bf4514057733d225d848fcf4d506b 1035 PRINTS PR00702 Acriflavin resistance protein family signature 457 480 2.8E-35 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_06430 d03bf4514057733d225d848fcf4d506b 1035 PRINTS PR00702 Acriflavin resistance protein family signature 350 371 2.8E-35 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_02220 0e3bb20c409e68785ff9ae33601d652d 237 SUPERFAMILY SSF51366 1 232 6.12E-70 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 YH65_02220 0e3bb20c409e68785ff9ae33601d652d 237 Gene3D G3DSA:3.20.20.70 2 236 9.4E-81 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YH65_02220 0e3bb20c409e68785ff9ae33601d652d 237 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 3 230 1.5E-79 T 11-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 YH65_02220 0e3bb20c409e68785ff9ae33601d652d 237 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 233 35.2 T 11-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 YH65_02220 0e3bb20c409e68785ff9ae33601d652d 237 Pfam PF00977 Histidine biosynthesis protein 3 225 4.7E-74 T 11-10-2018 IPR006062 Histidine biosynthesis GO:0000105 YH65_00710 d82f5b0f78cd08082a0423f2c4c8165c 466 Gene3D G3DSA:3.60.15.10 7 439 1.8E-145 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like YH65_00710 d82f5b0f78cd08082a0423f2c4c8165c 466 SMART SM01027 256 381 6.6E-61 T 11-10-2018 IPR022712 Beta-Casp domain YH65_00710 d82f5b0f78cd08082a0423f2c4c8165c 466 Pfam PF00753 Metallo-beta-lactamase superfamily 13 132 1.6E-13 T 11-10-2018 IPR001279 Metallo-beta-lactamase YH65_00710 d82f5b0f78cd08082a0423f2c4c8165c 466 Gene3D G3DSA:3.40.50.10890 224 407 1.8E-145 T 11-10-2018 YH65_00710 d82f5b0f78cd08082a0423f2c4c8165c 466 Pfam PF10996 Beta-Casp domain 256 381 1.1E-30 T 11-10-2018 IPR022712 Beta-Casp domain YH65_00710 d82f5b0f78cd08082a0423f2c4c8165c 466 SUPERFAMILY SSF56281 4 465 1.49E-121 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like YH65_00710 d82f5b0f78cd08082a0423f2c4c8165c 466 SMART SM00849 14 229 1.7E-14 T 11-10-2018 IPR001279 Metallo-beta-lactamase YH65_00710 d82f5b0f78cd08082a0423f2c4c8165c 466 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 396 456 3.5E-12 T 11-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain YH65_05525 8f6cc1885d137f7709096c2658407c60 279 Gene3D G3DSA:3.40.390.10 168 279 7.9E-33 T 11-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 YH65_05525 8f6cc1885d137f7709096c2658407c60 279 Pfam PF06167 Glucose-regulated metallo-peptidase M90 29 270 2.4E-68 T 11-10-2018 IPR010384 MtfA family YH65_05525 8f6cc1885d137f7709096c2658407c60 279 SUPERFAMILY SSF55486 62 272 7.32E-34 T 11-10-2018 YH65_05525 8f6cc1885d137f7709096c2658407c60 279 Gene3D G3DSA:1.10.472.150 45 164 8.9E-18 T 11-10-2018 YH65_00725 df6d080b3cd22c8e55383778f69ac047 866 Gene3D G3DSA:1.10.760.10 754 862 1.2E-19 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_00725 df6d080b3cd22c8e55383778f69ac047 866 Gene3D G3DSA:2.60.40.420 529 643 1.5E-29 T 11-10-2018 IPR008972 Cupredoxin YH65_00725 df6d080b3cd22c8e55383778f69ac047 866 Pfam PF00034 Cytochrome c 771 858 1.9E-7 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YH65_00725 df6d080b3cd22c8e55383778f69ac047 866 TIGRFAM TIGR04246 nitrous_NosZ_Gp: nitrous-oxide reductase, Sec-dependent 45 644 4.8E-260 T 11-10-2018 IPR026468 Nitrous-oxide reductase, Sec-dependent YH65_00725 df6d080b3cd22c8e55383778f69ac047 866 Gene3D G3DSA:2.130.10.10 49 526 6.5E-168 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 YH65_00725 df6d080b3cd22c8e55383778f69ac047 866 SUPERFAMILY SSF50974 49 517 9.02E-83 T 11-10-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 YH65_00725 df6d080b3cd22c8e55383778f69ac047 866 SUPERFAMILY SSF49503 478 654 8.51E-26 T 11-10-2018 IPR008972 Cupredoxin YH65_00725 df6d080b3cd22c8e55383778f69ac047 866 Pfam PF13473 Cupredoxin-like domain 556 629 6.1E-7 T 11-10-2018 IPR028096 EfeO-type cupredoxin-like domain YH65_00725 df6d080b3cd22c8e55383778f69ac047 866 SUPERFAMILY SSF46626 765 861 1.11E-14 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_04315 05a0c25f17f3b5f1c1f3eb00a251be88 879 Gene3D G3DSA:3.10.450.50 791 871 1.2E-9 T 11-10-2018 YH65_04315 05a0c25f17f3b5f1c1f3eb00a251be88 879 SUPERFAMILY SSF81886 588 860 5.62E-65 T 11-10-2018 IPR036266 SecA, Wing/Scaffold superfamily YH65_04315 05a0c25f17f3b5f1c1f3eb00a251be88 879 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 27 513 5.6E-228 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 YH65_04315 05a0c25f17f3b5f1c1f3eb00a251be88 879 Gene3D G3DSA:1.10.1200.230 638 722 0.0 T 11-10-2018 YH65_04315 05a0c25f17f3b5f1c1f3eb00a251be88 879 SMART SM00958 229 355 1.8E-66 T 11-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 YH65_04315 05a0c25f17f3b5f1c1f3eb00a251be88 879 SUPERFAMILY SSF52540 414 586 2.06E-52 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_04315 05a0c25f17f3b5f1c1f3eb00a251be88 879 Pfam PF07517 SecA DEAD-like domain 7 399 1.8E-125 T 11-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 YH65_04315 05a0c25f17f3b5f1c1f3eb00a251be88 879 Hamap MF_01382 Protein translocase subunit SecA [secA]. 4 798 19.406 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 YH65_04315 05a0c25f17f3b5f1c1f3eb00a251be88 879 PRINTS PR00906 SecA protein signature 373 390 1.6E-66 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 YH65_04315 05a0c25f17f3b5f1c1f3eb00a251be88 879 PRINTS PR00906 SecA protein signature 336 358 1.6E-66 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 YH65_04315 05a0c25f17f3b5f1c1f3eb00a251be88 879 PRINTS PR00906 SecA protein signature 410 423 1.6E-66 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 YH65_04315 05a0c25f17f3b5f1c1f3eb00a251be88 879 PRINTS PR00906 SecA protein signature 117 127 1.6E-66 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 YH65_04315 05a0c25f17f3b5f1c1f3eb00a251be88 879 PRINTS PR00906 SecA protein signature 171 191 1.6E-66 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 YH65_04315 05a0c25f17f3b5f1c1f3eb00a251be88 879 PRINTS PR00906 SecA protein signature 101 115 1.6E-66 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 YH65_04315 05a0c25f17f3b5f1c1f3eb00a251be88 879 PRINTS PR00906 SecA protein signature 63 87 1.6E-66 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 YH65_04315 05a0c25f17f3b5f1c1f3eb00a251be88 879 Pfam PF01043 SecA preprotein cross-linking domain 234 355 3.4E-38 T 11-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 YH65_04315 05a0c25f17f3b5f1c1f3eb00a251be88 879 Gene3D G3DSA:1.10.3060.10 588 790 0.0 T 11-10-2018 YH65_04315 05a0c25f17f3b5f1c1f3eb00a251be88 879 Pfam PF02810 SEC-C motif 852 870 7.0E-10 T 11-10-2018 IPR004027 SEC-C motif YH65_04315 05a0c25f17f3b5f1c1f3eb00a251be88 879 SUPERFAMILY SSF81767 228 365 1.12E-42 T 11-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 YH65_04315 05a0c25f17f3b5f1c1f3eb00a251be88 879 SUPERFAMILY SSF52540 5 412 9.01E-78 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_04315 05a0c25f17f3b5f1c1f3eb00a251be88 879 Pfam PF07516 SecA Wing and Scaffold domain 586 793 2.0E-54 T 11-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 YH65_04315 05a0c25f17f3b5f1c1f3eb00a251be88 879 Gene3D G3DSA:3.40.50.300 414 587 0.0 T 11-10-2018 YH65_04315 05a0c25f17f3b5f1c1f3eb00a251be88 879 Gene3D G3DSA:3.40.50.300 16 413 0.0 T 11-10-2018 YH65_04315 05a0c25f17f3b5f1c1f3eb00a251be88 879 SMART SM00957 5 399 2.4E-273 T 11-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 YH65_04315 05a0c25f17f3b5f1c1f3eb00a251be88 879 Gene3D G3DSA:3.90.1440.10 230 365 0.0 T 11-10-2018 YH65_02440 49514f2c636d9396b27b595393f5285f 263 Gene3D G3DSA:3.40.50.1860 3 228 1.1E-74 T 11-10-2018 YH65_02440 49514f2c636d9396b27b595393f5285f 263 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 68 76 - T 11-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 YH65_02440 49514f2c636d9396b27b595393f5285f 263 Pfam PF01177 Asp/Glu/Hydantoin racemase 3 215 2.8E-31 T 11-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 YH65_02440 49514f2c636d9396b27b595393f5285f 263 SUPERFAMILY SSF53681 107 240 4.41E-29 T 11-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 YH65_02440 49514f2c636d9396b27b595393f5285f 263 Gene3D G3DSA:3.40.50.1860 94 207 1.1E-74 T 11-10-2018 YH65_02440 49514f2c636d9396b27b595393f5285f 263 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 180 190 - T 11-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 YH65_02440 49514f2c636d9396b27b595393f5285f 263 Hamap MF_00258 Glutamate racemase [murI]. 1 256 32.044 T 11-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 YH65_02440 49514f2c636d9396b27b595393f5285f 263 TIGRFAM TIGR00067 glut_race: glutamate racemase 3 238 1.0E-63 T 11-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 YH65_02440 49514f2c636d9396b27b595393f5285f 263 SUPERFAMILY SSF53681 1 105 9.15E-28 T 11-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 YH65_10905 4a9a99763a034fbb7a2471f1ce2de922 339 SUPERFAMILY SSF47240 15 335 3.46E-94 T 11-10-2018 IPR009078 Ferritin-like superfamily YH65_10905 4a9a99763a034fbb7a2471f1ce2de922 339 PIRSF PIRSF000355 1 339 4.6E-125 T 11-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 YH65_10905 4a9a99763a034fbb7a2471f1ce2de922 339 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 117 133 - T 11-10-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 YH65_10905 4a9a99763a034fbb7a2471f1ce2de922 339 Gene3D G3DSA:1.10.620.20 2 331 2.7E-97 T 11-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 YH65_10905 4a9a99763a034fbb7a2471f1ce2de922 339 Pfam PF00268 Ribonucleotide reductase, small chain 29 304 1.5E-75 T 11-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 YH65_09660 2cc1c6efdba267816cd9047838322cbb 1016 SUPERFAMILY SSF82866 781 999 5.89E-48 T 11-10-2018 YH65_09660 2cc1c6efdba267816cd9047838322cbb 1016 Gene3D G3DSA:3.30.70.1430 545 641 5.9E-297 T 11-10-2018 YH65_09660 2cc1c6efdba267816cd9047838322cbb 1016 SUPERFAMILY SSF82714 692 775 1.16E-13 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YH65_09660 2cc1c6efdba267816cd9047838322cbb 1016 Gene3D G3DSA:3.30.70.1440 642 836 5.9E-297 T 11-10-2018 YH65_09660 2cc1c6efdba267816cd9047838322cbb 1016 Gene3D G3DSA:3.30.2090.10 691 780 5.9E-297 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YH65_09660 2cc1c6efdba267816cd9047838322cbb 1016 Gene3D G3DSA:1.20.1640.10 491 993 5.9E-297 T 11-10-2018 YH65_09660 2cc1c6efdba267816cd9047838322cbb 1016 Gene3D G3DSA:3.30.2090.10 174 260 5.9E-297 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YH65_09660 2cc1c6efdba267816cd9047838322cbb 1016 Gene3D G3DSA:3.30.70.1430 38 788 5.9E-297 T 11-10-2018 YH65_09660 2cc1c6efdba267816cd9047838322cbb 1016 SUPERFAMILY SSF82693 543 643 5.75E-9 T 11-10-2018 YH65_09660 2cc1c6efdba267816cd9047838322cbb 1016 SUPERFAMILY SSF82714 179 256 3.53E-8 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YH65_09660 2cc1c6efdba267816cd9047838322cbb 1016 Gene3D G3DSA:3.30.70.1320 130 317 5.9E-297 T 11-10-2018 YH65_09660 2cc1c6efdba267816cd9047838322cbb 1016 SUPERFAMILY SSF82693 38 129 1.06E-23 T 11-10-2018 YH65_09660 2cc1c6efdba267816cd9047838322cbb 1016 SUPERFAMILY SSF82693 133 315 3.4E-15 T 11-10-2018 YH65_09660 2cc1c6efdba267816cd9047838322cbb 1016 Pfam PF00873 AcrB/AcrD/AcrF family 1 996 2.6E-280 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_09660 2cc1c6efdba267816cd9047838322cbb 1016 Gene3D G3DSA:1.20.1640.10 8 490 5.9E-297 T 11-10-2018 YH65_09660 2cc1c6efdba267816cd9047838322cbb 1016 SUPERFAMILY SSF82866 281 479 1.57E-39 T 11-10-2018 YH65_09660 2cc1c6efdba267816cd9047838322cbb 1016 PRINTS PR00702 Acriflavin resistance protein family signature 376 400 1.2E-64 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_09660 2cc1c6efdba267816cd9047838322cbb 1016 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 1.2E-64 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_09660 2cc1c6efdba267816cd9047838322cbb 1016 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 1.2E-64 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_09660 2cc1c6efdba267816cd9047838322cbb 1016 PRINTS PR00702 Acriflavin resistance protein family signature 530 547 1.2E-64 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_09660 2cc1c6efdba267816cd9047838322cbb 1016 PRINTS PR00702 Acriflavin resistance protein family signature 321 344 1.2E-64 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_09660 2cc1c6efdba267816cd9047838322cbb 1016 PRINTS PR00702 Acriflavin resistance protein family signature 429 452 1.2E-64 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_09660 2cc1c6efdba267816cd9047838322cbb 1016 PRINTS PR00702 Acriflavin resistance protein family signature 596 610 1.2E-64 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_09660 2cc1c6efdba267816cd9047838322cbb 1016 PRINTS PR00702 Acriflavin resistance protein family signature 348 369 1.2E-64 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_09660 2cc1c6efdba267816cd9047838322cbb 1016 PRINTS PR00702 Acriflavin resistance protein family signature 454 477 1.2E-64 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_08100 1fe72b4b81e7a78f63b31b9078a77f21 328 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 44 265 3.4E-21 T 11-10-2018 IPR003788 Protein arginine methyltransferase NDUFAF7 Reactome: R-HSA-6799198 YH65_08100 1fe72b4b81e7a78f63b31b9078a77f21 328 Gene3D G3DSA:3.40.50.12710 1 328 7.1E-55 T 11-10-2018 IPR038375 Protein arginine methyltransferase NDUFAF7 superfamily Reactome: R-HSA-6799198 YH65_08100 1fe72b4b81e7a78f63b31b9078a77f21 328 SUPERFAMILY SSF53335 2 326 2.24E-65 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YH65_01925 e8efdbcf3744d826ace9ce6a3e1840b3 53 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 52 4.4E-15 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_01925 e8efdbcf3744d826ace9ce6a3e1840b3 53 Pfam PF01783 Ribosomal L32p protein family 2 52 1.2E-11 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_01925 e8efdbcf3744d826ace9ce6a3e1840b3 53 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 53 14.101 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_01925 e8efdbcf3744d826ace9ce6a3e1840b3 53 SUPERFAMILY SSF57829 1 51 4.33E-12 T 11-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 YH65_07715 242461c69b7a432021a32b6094a27175 338 Gene3D G3DSA:3.40.250.10 207 327 5.6E-26 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily YH65_07715 242461c69b7a432021a32b6094a27175 338 SUPERFAMILY SSF52821 208 330 2.62E-25 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily YH65_07715 242461c69b7a432021a32b6094a27175 338 SMART SM00450 225 324 1.9E-13 T 11-10-2018 IPR001763 Rhodanese-like domain YH65_07715 242461c69b7a432021a32b6094a27175 338 Pfam PF00581 Rhodanese-like domain 229 320 9.2E-11 T 11-10-2018 IPR001763 Rhodanese-like domain YH65_07715 242461c69b7a432021a32b6094a27175 338 Gene3D G3DSA:1.20.58.2000 2 75 4.5E-5 T 11-10-2018 YH65_00975 b64c679be081d6924649f714aac6e700 188 SUPERFAMILY SSF51283 3 186 2.62E-51 T 11-10-2018 IPR036157 dUTPase-like superfamily YH65_00975 b64c679be081d6924649f714aac6e700 188 Hamap MF_00146 dCTP deaminase [dcd]. 1 184 28.723 T 11-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 YH65_00975 b64c679be081d6924649f714aac6e700 188 Pfam PF00692 dUTPase 78 179 7.6E-9 T 11-10-2018 IPR029054 dUTPase-like YH65_00975 b64c679be081d6924649f714aac6e700 188 Gene3D G3DSA:2.70.40.10 1 156 2.6E-50 T 11-10-2018 IPR036157 dUTPase-like superfamily YH65_00975 b64c679be081d6924649f714aac6e700 188 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 4 184 1.5E-55 T 11-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 YH65_08405 f18a6ddae43ebade4841f17255b0ebc1 117 Pfam PF01230 HIT domain 10 103 8.5E-28 T 11-10-2018 IPR001310 Histidine triad (HIT) protein YH65_08405 f18a6ddae43ebade4841f17255b0ebc1 117 PRINTS PR00332 Histidine triad family signature 89 99 4.4E-18 T 11-10-2018 IPR001310 Histidine triad (HIT) protein YH65_08405 f18a6ddae43ebade4841f17255b0ebc1 117 PRINTS PR00332 Histidine triad family signature 3 19 4.4E-18 T 11-10-2018 IPR001310 Histidine triad (HIT) protein YH65_08405 f18a6ddae43ebade4841f17255b0ebc1 117 PRINTS PR00332 Histidine triad family signature 24 42 4.4E-18 T 11-10-2018 IPR001310 Histidine triad (HIT) protein YH65_08405 f18a6ddae43ebade4841f17255b0ebc1 117 Gene3D G3DSA:3.30.428.10 1 112 1.1E-37 T 11-10-2018 IPR036265 HIT-like superfamily YH65_08405 f18a6ddae43ebade4841f17255b0ebc1 117 ProSitePatterns PS00892 HIT domain signature. 82 100 - T 11-10-2018 IPR019808 Histidine triad, conserved site YH65_08405 f18a6ddae43ebade4841f17255b0ebc1 117 SUPERFAMILY SSF54197 2 104 1.18E-33 T 11-10-2018 IPR036265 HIT-like superfamily YH65_01255 dbdc938e54b13e26947068bd0342dca2 471 SUPERFAMILY SSF141868 230 469 1.29E-54 T 11-10-2018 IPR035919 EAL domain superfamily YH65_01255 dbdc938e54b13e26947068bd0342dca2 471 Gene3D G3DSA:3.20.20.450 223 471 4.9E-55 T 11-10-2018 IPR035919 EAL domain superfamily YH65_01255 dbdc938e54b13e26947068bd0342dca2 471 Pfam PF00563 EAL domain 230 460 1.2E-59 T 11-10-2018 IPR001633 EAL domain YH65_01255 dbdc938e54b13e26947068bd0342dca2 471 SMART SM00052 224 465 4.1E-26 T 11-10-2018 IPR001633 EAL domain YH65_02975 2a213c97cf07bfc38322b7b21d9bbf29 149 SMART SM00091 19 85 0.0021 T 11-10-2018 IPR000014 PAS domain YH65_02975 2a213c97cf07bfc38322b7b21d9bbf29 149 SUPERFAMILY SSF55785 30 125 5.48E-26 T 11-10-2018 IPR035965 PAS domain superfamily YH65_02975 2a213c97cf07bfc38322b7b21d9bbf29 149 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 30 125 8.1E-14 T 11-10-2018 IPR000014 PAS domain YH65_02975 2a213c97cf07bfc38322b7b21d9bbf29 149 Pfam PF00989 PAS fold 31 124 2.2E-13 T 11-10-2018 IPR013767 PAS fold GO:0006355 YH65_02975 2a213c97cf07bfc38322b7b21d9bbf29 149 Gene3D G3DSA:3.30.450.20 26 149 2.9E-24 T 11-10-2018 YH65_10985 ff899bccb6b2e091c282174fbd50966c 604 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 37 601 33.385 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 YH65_10985 ff899bccb6b2e091c282174fbd50966c 604 Gene3D G3DSA:3.30.54.20 101 154 2.9E-56 T 11-10-2018 YH65_10985 ff899bccb6b2e091c282174fbd50966c 604 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 137 186 2.5E-12 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 YH65_10985 ff899bccb6b2e091c282174fbd50966c 604 PRINTS PR01047 Threonyl-tRNA synthetase signature 297 325 6.4E-51 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 YH65_10985 ff899bccb6b2e091c282174fbd50966c 604 PRINTS PR01047 Threonyl-tRNA synthetase signature 330 353 6.4E-51 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 YH65_10985 ff899bccb6b2e091c282174fbd50966c 604 PRINTS PR01047 Threonyl-tRNA synthetase signature 431 459 6.4E-51 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 YH65_10985 ff899bccb6b2e091c282174fbd50966c 604 PRINTS PR01047 Threonyl-tRNA synthetase signature 474 487 6.4E-51 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 YH65_10985 ff899bccb6b2e091c282174fbd50966c 604 PRINTS PR01047 Threonyl-tRNA synthetase signature 501 513 6.4E-51 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 YH65_10985 ff899bccb6b2e091c282174fbd50966c 604 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 43 598 2.4E-222 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 YH65_10985 ff899bccb6b2e091c282174fbd50966c 604 SUPERFAMILY SSF55186 35 208 1.96E-58 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 YH65_10985 ff899bccb6b2e091c282174fbd50966c 604 Gene3D G3DSA:3.40.50.800 500 603 8.6E-28 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily YH65_10985 ff899bccb6b2e091c282174fbd50966c 604 Gene3D G3DSA:3.30.980.10 40 189 2.9E-56 T 11-10-2018 YH65_10985 ff899bccb6b2e091c282174fbd50966c 604 SMART SM00863 137 186 3.6E-19 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 YH65_10985 ff899bccb6b2e091c282174fbd50966c 604 SUPERFAMILY SSF52954 494 599 4.83E-29 T 11-10-2018 YH65_10985 ff899bccb6b2e091c282174fbd50966c 604 Gene3D G3DSA:3.30.930.10 192 499 2.1E-126 T 11-10-2018 YH65_10985 ff899bccb6b2e091c282174fbd50966c 604 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 287 496 7.6E-42 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 YH65_10985 ff899bccb6b2e091c282174fbd50966c 604 SUPERFAMILY SSF55681 210 492 4.4E-94 T 11-10-2018 YH65_10985 ff899bccb6b2e091c282174fbd50966c 604 Pfam PF03129 Anticodon binding domain 508 596 4.0E-23 T 11-10-2018 IPR004154 Anticodon-binding YH65_01400 24f1a8127ff5f3abc19b43b1a6361ef3 444 Pfam PF07690 Major Facilitator Superfamily 9 232 2.0E-36 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YH65_01400 24f1a8127ff5f3abc19b43b1a6361ef3 444 SUPERFAMILY SSF103473 5 386 1.96E-65 T 11-10-2018 IPR036259 MFS transporter superfamily YH65_01400 24f1a8127ff5f3abc19b43b1a6361ef3 444 Gene3D G3DSA:1.20.1250.20 3 387 1.1E-79 T 11-10-2018 YH65_02885 75626315c336472963e25b0abd3c774a 240 Pfam PF01478 Type IV leader peptidase family 103 202 1.7E-11 T 11-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 YH65_02885 75626315c336472963e25b0abd3c774a 240 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 7 89 2.1E-36 T 11-10-2018 IPR010627 Peptidase A24A, N-terminal YH65_02210 b811813a08b4041e8942690d0c0174f3 671 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 133 624 4.9E-207 T 11-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 YH65_02210 b811813a08b4041e8942690d0c0174f3 671 SUPERFAMILY SSF140990 436 628 4.19E-55 T 11-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 YH65_02210 b811813a08b4041e8942690d0c0174f3 671 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 22 631 33.915 T 11-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 YH65_02210 b811813a08b4041e8942690d0c0174f3 671 Gene3D G3DSA:1.10.8.60 356 429 1.0E-25 T 11-10-2018 YH65_02210 b811813a08b4041e8942690d0c0174f3 671 Pfam PF06480 FtsH Extracellular 25 126 9.7E-8 T 11-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 YH65_02210 b811813a08b4041e8942690d0c0174f3 671 Pfam PF01434 Peptidase family M41 415 623 7.4E-64 T 11-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 YH65_02210 b811813a08b4041e8942690d0c0174f3 671 Gene3D G3DSA:3.40.50.300 168 355 6.1E-66 T 11-10-2018 YH65_02210 b811813a08b4041e8942690d0c0174f3 671 Gene3D G3DSA:1.20.58.760 430 636 1.3E-58 T 11-10-2018 YH65_02210 b811813a08b4041e8942690d0c0174f3 671 ProSitePatterns PS00674 AAA-protein family signature. 324 342 - T 11-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 YH65_02210 b811813a08b4041e8942690d0c0174f3 671 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 220 352 4.1E-44 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 YH65_02210 b811813a08b4041e8942690d0c0174f3 671 SMART SM00382 216 356 1.2E-24 T 11-10-2018 IPR003593 AAA+ ATPase domain YH65_02210 b811813a08b4041e8942690d0c0174f3 671 SUPERFAMILY SSF52540 179 449 1.78E-69 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_07670 bffc4bff0ed44c6671c976fcee967cf1 308 SUPERFAMILY SSF49503 171 283 5.01E-13 T 11-10-2018 IPR008972 Cupredoxin YH65_07670 bffc4bff0ed44c6671c976fcee967cf1 308 Gene3D G3DSA:2.60.40.420 3 303 2.8E-51 T 11-10-2018 IPR008972 Cupredoxin YH65_07670 bffc4bff0ed44c6671c976fcee967cf1 308 Pfam PF00394 Multicopper oxidase 190 291 5.4E-12 T 11-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 YH65_07670 bffc4bff0ed44c6671c976fcee967cf1 308 SUPERFAMILY SSF49503 20 150 8.56E-26 T 11-10-2018 IPR008972 Cupredoxin YH65_07670 bffc4bff0ed44c6671c976fcee967cf1 308 Pfam PF07732 Multicopper oxidase 43 151 3.8E-10 T 11-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 YH65_08805 e29b20279b4703ea1fe637cc5cb95072 148 Gene3D G3DSA:1.10.10.10 2 91 9.7E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YH65_08805 e29b20279b4703ea1fe637cc5cb95072 148 Gene3D G3DSA:3.30.1490.190 93 148 4.2E-26 T 11-10-2018 YH65_08805 e29b20279b4703ea1fe637cc5cb95072 148 Pfam PF01475 Ferric uptake regulator family 18 137 3.2E-40 T 11-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 YH65_08805 e29b20279b4703ea1fe637cc5cb95072 148 SUPERFAMILY SSF46785 9 142 1.2E-37 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YH65_10675 a1119fd1ac16ee55e928a10c882391e9 120 ProSitePatterns PS00646 Ribosomal protein S13 signature. 88 101 - T 11-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_10675 a1119fd1ac16ee55e928a10c882391e9 120 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 115 5.2E-52 T 11-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 YH65_10675 a1119fd1ac16ee55e928a10c882391e9 120 Gene3D G3DSA:1.10.8.50 1 72 3.2E-30 T 11-10-2018 YH65_10675 a1119fd1ac16ee55e928a10c882391e9 120 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 119 26.374 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_10675 a1119fd1ac16ee55e928a10c882391e9 120 SUPERFAMILY SSF46946 2 117 1.24E-43 T 11-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 YH65_10675 a1119fd1ac16ee55e928a10c882391e9 120 Gene3D G3DSA:4.10.910.10 73 118 1.4E-23 T 11-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_10675 a1119fd1ac16ee55e928a10c882391e9 120 PIRSF PIRSF002134 1 119 6.0E-43 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_10675 a1119fd1ac16ee55e928a10c882391e9 120 Pfam PF00416 Ribosomal protein S13/S18 3 109 9.8E-32 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_06340 e4b068ed6234866deb596032392fd586 128 Gene3D G3DSA:3.40.30.10 20 128 2.3E-18 T 11-10-2018 YH65_06340 e4b068ed6234866deb596032392fd586 128 Pfam PF13098 Thioredoxin-like domain 37 122 6.0E-7 T 11-10-2018 IPR012336 Thioredoxin-like fold YH65_06340 e4b068ed6234866deb596032392fd586 128 SUPERFAMILY SSF52833 20 127 2.47E-18 T 11-10-2018 IPR036249 Thioredoxin-like superfamily YH65_06985 636b333e66131f819f1b55c475004d0d 413 Gene3D G3DSA:3.40.50.720 8 398 3.8E-153 T 11-10-2018 YH65_06985 636b333e66131f819f1b55c475004d0d 413 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 8 140 5.9E-30 T 11-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 YH65_06985 636b333e66131f819f1b55c475004d0d 413 SUPERFAMILY SSF51735 4 194 6.37E-16 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily YH65_06985 636b333e66131f819f1b55c475004d0d 413 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 144 396 4.3E-35 T 11-10-2018 IPR032095 Saccharopine dehydrogenase, C-terminal Reactome: R-HSA-71064 YH65_06985 636b333e66131f819f1b55c475004d0d 413 Gene3D G3DSA:3.30.360.10 154 355 3.8E-153 T 11-10-2018 YH65_02375 1c47e856751498a69624aca24225a4d0 362 Pfam PF01370 NAD dependent epimerase/dehydratase family 7 286 1.3E-80 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 YH65_02375 1c47e856751498a69624aca24225a4d0 362 SUPERFAMILY SSF51735 3 361 5.82E-67 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily YH65_02375 1c47e856751498a69624aca24225a4d0 362 Hamap MF_00956 GDP-L-fucose synthase [fcl]. 4 360 48.849 T 11-10-2018 IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase GO:0009226|GO:0016491 KEGG: 00051+1.1.1.271|KEGG: 00520+1.1.1.271|MetaCyc: PWY-66|Reactome: R-HSA-6787639 YH65_02375 1c47e856751498a69624aca24225a4d0 362 Gene3D G3DSA:3.40.50.720 7 349 2.2E-96 T 11-10-2018 YH65_02375 1c47e856751498a69624aca24225a4d0 362 Gene3D G3DSA:3.90.25.10 169 358 2.2E-96 T 11-10-2018 YH65_01840 db05671b3b8d0b52bc68cd356c630b17 99 Gene3D G3DSA:3.30.1390.10 2 99 2.2E-41 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like YH65_01840 db05671b3b8d0b52bc68cd356c630b17 99 SUPERFAMILY SSF54736 16 97 6.8E-31 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like YH65_01840 db05671b3b8d0b52bc68cd356c630b17 99 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 16 94 5.7E-36 T 11-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 YH65_01840 db05671b3b8d0b52bc68cd356c630b17 99 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 5 93 25.844 T 11-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS YH65_10660 e0cba27b2907597b2fc40a9dc8e33087 252 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 166 184 - T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 YH65_10660 e0cba27b2907597b2fc40a9dc8e33087 252 Gene3D G3DSA:3.90.230.10 1 252 4.0E-87 T 11-10-2018 YH65_10660 e0cba27b2907597b2fc40a9dc8e33087 252 Pfam PF00557 Metallopeptidase family M24 13 240 8.6E-48 T 11-10-2018 IPR000994 Peptidase M24 YH65_10660 e0cba27b2907597b2fc40a9dc8e33087 252 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 250 1.4E-94 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 YH65_10660 e0cba27b2907597b2fc40a9dc8e33087 252 PRINTS PR00599 Methionine aminopeptidase-1 signature 68 81 3.3E-21 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 YH65_10660 e0cba27b2907597b2fc40a9dc8e33087 252 PRINTS PR00599 Methionine aminopeptidase-1 signature 193 205 3.3E-21 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 YH65_10660 e0cba27b2907597b2fc40a9dc8e33087 252 PRINTS PR00599 Methionine aminopeptidase-1 signature 160 172 3.3E-21 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 YH65_10660 e0cba27b2907597b2fc40a9dc8e33087 252 PRINTS PR00599 Methionine aminopeptidase-1 signature 90 106 3.3E-21 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 YH65_10660 e0cba27b2907597b2fc40a9dc8e33087 252 Hamap MF_01974 Methionine aminopeptidase [map]. 3 251 36.094 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 YH65_10660 e0cba27b2907597b2fc40a9dc8e33087 252 SUPERFAMILY SSF55920 4 249 2.49E-75 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like YH65_05265 a04d65e1982959c02615a8f510e5df97 467 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 2 357 4.6E-87 T 11-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 YH65_05265 a04d65e1982959c02615a8f510e5df97 467 Gene3D G3DSA:3.30.2130.30 1 163 8.1E-30 T 11-10-2018 YH65_05265 a04d65e1982959c02615a8f510e5df97 467 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 467 161.641 T 11-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 YH65_05265 a04d65e1982959c02615a8f510e5df97 467 SMART SM00981 63 154 2.9E-20 T 11-10-2018 IPR004114 THUMP domain GO:0003723 YH65_05265 a04d65e1982959c02615a8f510e5df97 467 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 164 356 1.1E-59 T 11-10-2018 IPR020536 Thil, AANH domain GO:0004810 KEGG: 00730+2.8.1.4 YH65_05265 a04d65e1982959c02615a8f510e5df97 467 SUPERFAMILY SSF52821 385 465 9.07E-9 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily YH65_05265 a04d65e1982959c02615a8f510e5df97 467 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 372 467 1.2E-28 T 11-10-2018 IPR026340 Thiazole biosynthesis domain GO:0052837 KEGG: 00730+2.8.1.4 YH65_05265 a04d65e1982959c02615a8f510e5df97 467 Pfam PF02926 THUMP domain 42 153 1.6E-16 T 11-10-2018 IPR004114 THUMP domain GO:0003723 YH65_05265 a04d65e1982959c02615a8f510e5df97 467 Gene3D G3DSA:3.40.50.620 164 373 6.6E-51 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YH65_05265 a04d65e1982959c02615a8f510e5df97 467 SUPERFAMILY SSF52402 163 361 8.38E-42 T 11-10-2018 YH65_05265 a04d65e1982959c02615a8f510e5df97 467 SUPERFAMILY SSF143437 2 162 1.69E-38 T 11-10-2018 YH65_05265 a04d65e1982959c02615a8f510e5df97 467 Gene3D G3DSA:3.40.250.10 377 467 2.7E-8 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily YH65_00440 561491afbd01b1816136b080dbd4147c 129 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 6 126 17.039 T 11-10-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 YH65_00440 561491afbd01b1816136b080dbd4147c 129 Gene3D G3DSA:1.20.58.1610 1 126 2.0E-36 T 11-10-2018 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_00440 561491afbd01b1816136b080dbd4147c 129 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 32 125 2.2E-32 T 11-10-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_00515 a67db8849dc9e7d505890a7792faba21 298 SUPERFAMILY SSF52540 10 146 5.46E-13 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_00515 a67db8849dc9e7d505890a7792faba21 298 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 10 284 9.6E-71 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 YH65_00515 a67db8849dc9e7d505890a7792faba21 298 Gene3D G3DSA:3.40.50.300 11 279 6.6E-68 T 11-10-2018 YH65_00515 a67db8849dc9e7d505890a7792faba21 298 Pfam PF01715 IPP transferase 41 281 7.6E-55 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 YH65_00515 a67db8849dc9e7d505890a7792faba21 298 Gene3D G3DSA:1.10.20.140 114 183 6.6E-68 T 11-10-2018 YH65_00515 a67db8849dc9e7d505890a7792faba21 298 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 7 295 21.399 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 YH65_04960 e3c6a8564b603baaf7c95fe29338c765 305 Pfam PF03734 L,D-transpeptidase catalytic domain 158 303 1.5E-19 T 11-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 YH65_04960 e3c6a8564b603baaf7c95fe29338c765 305 Pfam PF01471 Putative peptidoglycan binding domain 44 100 3.0E-8 T 11-10-2018 IPR002477 Peptidoglycan binding-like YH65_04960 e3c6a8564b603baaf7c95fe29338c765 305 SUPERFAMILY SSF47090 44 101 6.54E-11 T 11-10-2018 IPR036365 PGBD-like superfamily YH65_04960 e3c6a8564b603baaf7c95fe29338c765 305 SUPERFAMILY SSF141523 156 303 2.62E-22 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like YH65_04960 e3c6a8564b603baaf7c95fe29338c765 305 Gene3D G3DSA:2.40.440.10 157 305 2.8E-23 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like YH65_04960 e3c6a8564b603baaf7c95fe29338c765 305 Gene3D G3DSA:1.10.101.10 40 110 7.2E-13 T 11-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 YH65_10260 e98d91302640c4c41e479f8a2d8561ba 347 PRINTS PR00142 RecA protein signature 213 241 1.2E-84 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 YH65_10260 e98d91302640c4c41e479f8a2d8561ba 347 PRINTS PR00142 RecA protein signature 129 158 1.2E-84 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 YH65_10260 e98d91302640c4c41e479f8a2d8561ba 347 PRINTS PR00142 RecA protein signature 95 124 1.2E-84 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 YH65_10260 e98d91302640c4c41e479f8a2d8561ba 347 PRINTS PR00142 RecA protein signature 167 196 1.2E-84 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 YH65_10260 e98d91302640c4c41e479f8a2d8561ba 347 PRINTS PR00142 RecA protein signature 300 317 1.2E-84 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 YH65_10260 e98d91302640c4c41e479f8a2d8561ba 347 PRINTS PR00142 RecA protein signature 246 275 1.2E-84 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 YH65_10260 e98d91302640c4c41e479f8a2d8561ba 347 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 6 327 5.1E-168 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 YH65_10260 e98d91302640c4c41e479f8a2d8561ba 347 Pfam PF00154 recA bacterial DNA recombination protein 9 271 1.0E-137 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 YH65_10260 e98d91302640c4c41e479f8a2d8561ba 347 Gene3D G3DSA:3.40.50.300 28 270 6.9E-84 T 11-10-2018 YH65_10260 e98d91302640c4c41e479f8a2d8561ba 347 SMART SM00382 59 231 6.8E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain YH65_10260 e98d91302640c4c41e479f8a2d8561ba 347 Gene3D G3DSA:3.30.250.10 271 346 5.1E-26 T 11-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal YH65_10260 e98d91302640c4c41e479f8a2d8561ba 347 SUPERFAMILY SSF54752 271 329 1.83E-20 T 11-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal YH65_10260 e98d91302640c4c41e479f8a2d8561ba 347 SUPERFAMILY SSF52540 6 270 1.02E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_10260 e98d91302640c4c41e479f8a2d8561ba 347 Hamap MF_00268 Protein RecA [recA]. 7 332 51.288 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 YH65_06115 1d8524f5e3a151bd6928d93c2bda4222 442 Gene3D G3DSA:1.10.357.20 267 441 2.3E-51 T 11-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain YH65_06115 1d8524f5e3a151bd6928d93c2bda4222 442 SUPERFAMILY SSF161093 271 441 2.48E-50 T 11-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 YH65_06115 1d8524f5e3a151bd6928d93c2bda4222 442 Pfam PF01769 Divalent cation transporter 313 434 4.6E-27 T 11-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 YH65_06115 1d8524f5e3a151bd6928d93c2bda4222 442 SMART SM00924 16 122 3.3E-20 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain YH65_06115 1d8524f5e3a151bd6928d93c2bda4222 442 Gene3D G3DSA:3.10.580.10 118 253 6.6E-31 T 11-10-2018 YH65_06115 1d8524f5e3a151bd6928d93c2bda4222 442 SUPERFAMILY SSF158791 14 119 5.75E-16 T 11-10-2018 YH65_06115 1d8524f5e3a151bd6928d93c2bda4222 442 SUPERFAMILY SSF54631 122 264 2.62E-19 T 11-10-2018 YH65_06115 1d8524f5e3a151bd6928d93c2bda4222 442 TIGRFAM TIGR00400 mgtE: magnesium transporter 14 441 2.4E-76 T 11-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 YH65_06115 1d8524f5e3a151bd6928d93c2bda4222 442 Pfam PF00571 CBS domain 207 248 8.3E-5 T 11-10-2018 IPR000644 CBS domain YH65_06115 1d8524f5e3a151bd6928d93c2bda4222 442 Pfam PF03448 MgtE intracellular N domain 16 120 1.3E-18 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain YH65_06115 1d8524f5e3a151bd6928d93c2bda4222 442 Gene3D G3DSA:1.25.60.10 3 117 1.3E-10 T 11-10-2018 IPR038076 MgtE, N-terminal domain superfamily YH65_06115 1d8524f5e3a151bd6928d93c2bda4222 442 SMART SM00116 200 248 0.0032 T 11-10-2018 IPR000644 CBS domain YH65_01125 8472dc178553e487864cd600262bcc99 113 Gene3D G3DSA:3.30.780.10 36 113 1.8E-19 T 11-10-2018 YH65_01125 8472dc178553e487864cd600262bcc99 113 SUPERFAMILY SSF55159 29 111 3.01E-17 T 11-10-2018 IPR036877 SUI1 domain superfamily GO:0003743|GO:0006413 YH65_01125 8472dc178553e487864cd600262bcc99 113 PIRSF PIRSF037511 2 113 2.0E-28 T 11-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 YH65_01125 8472dc178553e487864cd600262bcc99 113 Pfam PF01253 Translation initiation factor SUI1 42 109 8.0E-11 T 11-10-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 YH65_02935 b2d51dc981421cfcc60150012c1ad0ff 403 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 15 304 4.6E-80 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme YH65_02935 b2d51dc981421cfcc60150012c1ad0ff 403 Gene3D G3DSA:3.40.50.1100 50 146 1.5E-116 T 11-10-2018 YH65_02935 b2d51dc981421cfcc60150012c1ad0ff 403 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 42 55 - T 11-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 YH65_02935 b2d51dc981421cfcc60150012c1ad0ff 403 TIGRFAM TIGR01127 ilvA_1Cterm: threonine ammonia-lyase 21 400 4.5E-156 T 11-10-2018 IPR005789 Threonine dehydratase, catabolic GO:0004794|GO:0006567 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 YH65_02935 b2d51dc981421cfcc60150012c1ad0ff 403 SUPERFAMILY SSF55021 328 393 1.47E-5 T 11-10-2018 YH65_02935 b2d51dc981421cfcc60150012c1ad0ff 403 Gene3D G3DSA:3.40.50.1100 7 309 1.5E-116 T 11-10-2018 YH65_02935 b2d51dc981421cfcc60150012c1ad0ff 403 SUPERFAMILY SSF53686 4 315 3.4E-97 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme YH65_00680 2ec617a8c49cde75ff738222f31256a3 219 Pfam PF06695 Putative small multi-drug export protein 59 176 8.0E-23 T 11-10-2018 IPR009577 Putative small multi-drug export YH65_00845 a09c54b94751b8070bb21b73aa602662 74 Pfam PF04325 Protein of unknown function (DUF465) 19 65 3.9E-15 T 11-10-2018 IPR007420 Protein of unknown function DUF465 YH65_00845 a09c54b94751b8070bb21b73aa602662 74 Gene3D G3DSA:1.20.58.660 1 74 1.0E-26 T 11-10-2018 YH65_10915 05770aaccc610bcf6ae8434d66d7d6a5 211 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 7 208 1.5E-58 T 11-10-2018 YH65_10915 05770aaccc610bcf6ae8434d66d7d6a5 211 SUPERFAMILY SSF53335 18 208 2.01E-36 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YH65_10915 05770aaccc610bcf6ae8434d66d7d6a5 211 Gene3D G3DSA:3.40.50.150 2 211 3.3E-56 T 11-10-2018 YH65_10915 05770aaccc610bcf6ae8434d66d7d6a5 211 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 5 210 4.0E-70 T 11-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 YH65_10915 05770aaccc610bcf6ae8434d66d7d6a5 211 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 131 146 - T 11-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 YH65_08290 aaabff3d9a1da0b3729ff424a393cfd6 320 SUPERFAMILY SSF51735 6 146 4.74E-45 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily YH65_08290 aaabff3d9a1da0b3729ff424a393cfd6 320 PRINTS PR00086 L-lactate dehydrogenase signature 6 30 1.4E-24 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 YH65_08290 aaabff3d9a1da0b3729ff424a393cfd6 320 PRINTS PR00086 L-lactate dehydrogenase signature 31 55 1.4E-24 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 YH65_08290 aaabff3d9a1da0b3729ff424a393cfd6 320 PRINTS PR00086 L-lactate dehydrogenase signature 143 161 1.4E-24 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 YH65_08290 aaabff3d9a1da0b3729ff424a393cfd6 320 PRINTS PR00086 L-lactate dehydrogenase signature 173 186 1.4E-24 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 YH65_08290 aaabff3d9a1da0b3729ff424a393cfd6 320 PRINTS PR00086 L-lactate dehydrogenase signature 119 139 1.4E-24 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 YH65_08290 aaabff3d9a1da0b3729ff424a393cfd6 320 Gene3D G3DSA:3.40.50.720 1 147 5.2E-50 T 11-10-2018 YH65_08290 aaabff3d9a1da0b3729ff424a393cfd6 320 PIRSF PIRSF000102 1 314 5.4E-98 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 YH65_08290 aaabff3d9a1da0b3729ff424a393cfd6 320 Gene3D G3DSA:3.90.110.10 148 313 1.1E-47 T 11-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 YH65_08290 aaabff3d9a1da0b3729ff424a393cfd6 320 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 150 307 1.7E-23 T 11-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 YH65_08290 aaabff3d9a1da0b3729ff424a393cfd6 320 SUPERFAMILY SSF56327 148 308 2.16E-45 T 11-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 YH65_08290 aaabff3d9a1da0b3729ff424a393cfd6 320 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 6 145 2.4E-38 T 11-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 YH65_05340 7d5ee1e67a2ecb6653052b80f1f5135e 247 Gene3D G3DSA:2.60.40.790 35 182 4.7E-18 T 11-10-2018 IPR008978 HSP20-like chaperone YH65_05340 7d5ee1e67a2ecb6653052b80f1f5135e 247 Pfam PF00011 Hsp20/alpha crystallin family 83 177 1.8E-13 T 11-10-2018 IPR002068 Alpha crystallin/Hsp20 domain YH65_05340 7d5ee1e67a2ecb6653052b80f1f5135e 247 SUPERFAMILY SSF49764 81 173 1.71E-13 T 11-10-2018 IPR008978 HSP20-like chaperone YH65_03840 dfc474d7f774e03093bfb311a334b04c 362 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 4 179 1.0E-41 T 11-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 YH65_03840 dfc474d7f774e03093bfb311a334b04c 362 Gene3D G3DSA:3.30.2340.10 241 318 2.7E-8 T 11-10-2018 YH65_03840 dfc474d7f774e03093bfb311a334b04c 362 Gene3D G3DSA:3.30.2340.10 166 213 1.3E-56 T 11-10-2018 YH65_03840 dfc474d7f774e03093bfb311a334b04c 362 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 75 88 - T 11-10-2018 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 YH65_03840 dfc474d7f774e03093bfb311a334b04c 362 Gene3D G3DSA:3.30.2350.20 320 355 2.7E-8 T 11-10-2018 YH65_03840 dfc474d7f774e03093bfb311a334b04c 362 Gene3D G3DSA:3.30.2350.20 18 165 1.3E-56 T 11-10-2018 YH65_03840 dfc474d7f774e03093bfb311a334b04c 362 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 3 360 25.055 T 11-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 YH65_03840 dfc474d7f774e03093bfb311a334b04c 362 SUPERFAMILY SSF55120 4 357 3.02E-68 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 YH65_09515 2e2c391e50551a1cf51580811da12a74 478 Pfam PF00171 Aldehyde dehydrogenase family 20 475 3.6E-139 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 YH65_09515 2e2c391e50551a1cf51580811da12a74 478 Gene3D G3DSA:3.40.605.10 33 466 4.0E-137 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 YH65_09515 2e2c391e50551a1cf51580811da12a74 478 Gene3D G3DSA:3.40.309.10 256 445 4.0E-137 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 YH65_09515 2e2c391e50551a1cf51580811da12a74 478 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 252 259 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 YH65_09515 2e2c391e50551a1cf51580811da12a74 478 SUPERFAMILY SSF53720 14 477 2.09E-133 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 YH65_10345 7b46bc774a71fb6cea848bd3033f1ea7 445 SUPERFAMILY SSF53738 2 182 1.53E-45 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YH65_10345 7b46bc774a71fb6cea848bd3033f1ea7 445 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 93 102 - T 11-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YH65_10345 7b46bc774a71fb6cea848bd3033f1ea7 445 Gene3D G3DSA:3.40.120.10 258 341 1.6E-68 T 11-10-2018 YH65_10345 7b46bc774a71fb6cea848bd3033f1ea7 445 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 375 437 4.7E-6 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YH65_10345 7b46bc774a71fb6cea848bd3033f1ea7 445 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 2 134 3.9E-42 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YH65_10345 7b46bc774a71fb6cea848bd3033f1ea7 445 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 1 443 41.577 T 11-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YH65_10345 7b46bc774a71fb6cea848bd3033f1ea7 445 Gene3D G3DSA:3.40.120.10 176 363 1.6E-68 T 11-10-2018 YH65_10345 7b46bc774a71fb6cea848bd3033f1ea7 445 SUPERFAMILY SSF53738 259 366 3.22E-30 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YH65_10345 7b46bc774a71fb6cea848bd3033f1ea7 445 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 158 255 1.8E-19 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YH65_10345 7b46bc774a71fb6cea848bd3033f1ea7 445 Gene3D G3DSA:3.40.120.10 1 145 7.5E-46 T 11-10-2018 YH65_10345 7b46bc774a71fb6cea848bd3033f1ea7 445 SUPERFAMILY SSF53738 156 257 3.57E-28 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YH65_10345 7b46bc774a71fb6cea848bd3033f1ea7 445 Gene3D G3DSA:3.30.310.50 372 444 9.3E-11 T 11-10-2018 YH65_10345 7b46bc774a71fb6cea848bd3033f1ea7 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 92 106 1.4E-10 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YH65_10345 7b46bc774a71fb6cea848bd3033f1ea7 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 175 194 1.4E-10 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YH65_10345 7b46bc774a71fb6cea848bd3033f1ea7 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 235 250 1.4E-10 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YH65_10345 7b46bc774a71fb6cea848bd3033f1ea7 445 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 4 438 7.8E-158 T 11-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YH65_10345 7b46bc774a71fb6cea848bd3033f1ea7 445 SUPERFAMILY SSF55957 360 442 1.27E-13 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YH65_10345 7b46bc774a71fb6cea848bd3033f1ea7 445 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 259 366 1.8E-31 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YH65_10910 a0d2a7ea20b56356b18817eb958e3a94 236 SUPERFAMILY SSF56317 3 232 2.49E-36 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily YH65_10910 a0d2a7ea20b56356b18817eb958e3a94 236 Gene3D G3DSA:3.60.110.10 2 236 2.0E-41 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily YH65_10910 a0d2a7ea20b56356b18817eb958e3a94 236 Pfam PF00795 Carbon-nitrogen hydrolase 5 216 2.8E-20 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 YH65_01060 b82df34aab6506e6a60bb55193675e7d 318 Pfam PF00953 Glycosyl transferase family 4 56 207 1.1E-31 T 11-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 YH65_04040 c1ea0b5c536e690bbb36a5597b8e2d2c 367 SUPERFAMILY SSF53187 8 363 1.23E-42 T 11-10-2018 YH65_04040 c1ea0b5c536e690bbb36a5597b8e2d2c 367 Gene3D G3DSA:3.40.630.10 9 351 1.3E-99 T 11-10-2018 YH65_04040 c1ea0b5c536e690bbb36a5597b8e2d2c 367 Pfam PF01546 Peptidase family M20/M25/M40 68 359 1.7E-20 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 YH65_04040 c1ea0b5c536e690bbb36a5597b8e2d2c 367 PIRSF PIRSF037238 5 363 1.8E-91 T 11-10-2018 IPR017150 Peptidase M20, glutamate carboxypeptidase YH65_04040 c1ea0b5c536e690bbb36a5597b8e2d2c 367 Gene3D G3DSA:3.30.70.360 170 279 1.3E-99 T 11-10-2018 YH65_04040 c1ea0b5c536e690bbb36a5597b8e2d2c 367 Pfam PF07687 Peptidase dimerisation domain 167 266 1.1E-16 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain YH65_04040 c1ea0b5c536e690bbb36a5597b8e2d2c 367 SUPERFAMILY SSF55031 170 266 6.88E-18 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain YH65_04040 c1ea0b5c536e690bbb36a5597b8e2d2c 367 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 67 76 - T 11-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 YH65_10980 4abfe001f65084ca223f95ad0b67f991 345 SUPERFAMILY SSF55073 192 340 3.61E-16 T 11-10-2018 IPR029787 Nucleotide cyclase YH65_10980 4abfe001f65084ca223f95ad0b67f991 345 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 189 334 3.4E-10 T 11-10-2018 IPR000160 GGDEF domain YH65_10980 4abfe001f65084ca223f95ad0b67f991 345 Gene3D G3DSA:3.30.70.270 184 344 9.2E-19 T 11-10-2018 YH65_10980 4abfe001f65084ca223f95ad0b67f991 345 Pfam PF00990 Diguanylate cyclase, GGDEF domain 192 333 6.4E-13 T 11-10-2018 IPR000160 GGDEF domain YH65_10980 4abfe001f65084ca223f95ad0b67f991 345 SMART SM00267 177 340 7.5E-6 T 11-10-2018 IPR000160 GGDEF domain YH65_10980 4abfe001f65084ca223f95ad0b67f991 345 SUPERFAMILY SSF103473 27 161 9.68E-5 T 11-10-2018 IPR036259 MFS transporter superfamily YH65_11030 ac165b342b8efa333f4d5da5dd5f1227 468 Pfam PF05840 Bacteriophage replication gene A protein (GPA) 53 289 2.1E-18 T 11-10-2018 IPR008766 Replication gene A protein GO:0006260 YH65_05775 e48838ce2591ed7b125513c917f5c11f 534 Pfam PF00990 Diguanylate cyclase, GGDEF domain 110 267 1.0E-54 T 11-10-2018 IPR000160 GGDEF domain YH65_05775 e48838ce2591ed7b125513c917f5c11f 534 SUPERFAMILY SSF55073 115 273 3.66E-56 T 11-10-2018 IPR029787 Nucleotide cyclase YH65_05775 e48838ce2591ed7b125513c917f5c11f 534 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 106 269 1.5E-51 T 11-10-2018 IPR000160 GGDEF domain YH65_05775 e48838ce2591ed7b125513c917f5c11f 534 Gene3D G3DSA:3.20.20.450 285 534 2.2E-95 T 11-10-2018 IPR035919 EAL domain superfamily YH65_05775 e48838ce2591ed7b125513c917f5c11f 534 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 1 99 1.7E-16 T 11-10-2018 IPR000014 PAS domain YH65_05775 e48838ce2591ed7b125513c917f5c11f 534 Gene3D G3DSA:3.30.450.20 1 108 5.1E-21 T 11-10-2018 YH65_05775 e48838ce2591ed7b125513c917f5c11f 534 Pfam PF13426 PAS domain 1 91 6.5E-10 T 11-10-2018 IPR000014 PAS domain YH65_05775 e48838ce2591ed7b125513c917f5c11f 534 SMART SM00052 281 527 2.3E-107 T 11-10-2018 IPR001633 EAL domain YH65_05775 e48838ce2591ed7b125513c917f5c11f 534 Gene3D G3DSA:3.30.70.270 109 284 4.2E-67 T 11-10-2018 YH65_05775 e48838ce2591ed7b125513c917f5c11f 534 SUPERFAMILY SSF55785 1 99 1.17E-17 T 11-10-2018 IPR035965 PAS domain superfamily YH65_05775 e48838ce2591ed7b125513c917f5c11f 534 SUPERFAMILY SSF141868 286 533 1.57E-87 T 11-10-2018 IPR035919 EAL domain superfamily YH65_05775 e48838ce2591ed7b125513c917f5c11f 534 SMART SM00267 99 271 5.3E-75 T 11-10-2018 IPR000160 GGDEF domain YH65_05775 e48838ce2591ed7b125513c917f5c11f 534 Pfam PF00563 EAL domain 287 522 2.2E-73 T 11-10-2018 IPR001633 EAL domain YH65_06135 aa3ab88c95a15f65e3dd1f568b40996c 705 Pfam PF01553 Acyltransferase 23 150 3.4E-6 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 YH65_06135 aa3ab88c95a15f65e3dd1f568b40996c 705 Pfam PF12146 Serine aminopeptidase, S33 471 688 8.0E-28 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 YH65_06135 aa3ab88c95a15f65e3dd1f568b40996c 705 SMART SM00563 35 195 0.0042 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 YH65_06135 aa3ab88c95a15f65e3dd1f568b40996c 705 Gene3D G3DSA:3.40.50.1820 459 703 7.4E-54 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold YH65_06135 aa3ab88c95a15f65e3dd1f568b40996c 705 SUPERFAMILY SSF69593 13 216 9.15E-9 T 11-10-2018 YH65_06135 aa3ab88c95a15f65e3dd1f568b40996c 705 SUPERFAMILY SSF53474 463 704 5.59E-36 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold YH65_07165 f1751bd79da1bf615f7609d9b52a8667 740 Hamap MF_00420 Phosphoribosylformylglycinamidine synthase subunit PurL [purL]. 1 740 301.348 T 11-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 YH65_07165 f1751bd79da1bf615f7609d9b52a8667 740 PIRSF PIRSF001587 2 739 0.0 T 11-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 YH65_07165 f1751bd79da1bf615f7609d9b52a8667 740 Gene3D G3DSA:3.30.1330.10 394 567 1.1E-53 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily YH65_07165 f1751bd79da1bf615f7609d9b52a8667 740 SUPERFAMILY SSF56042 574 735 3.44E-28 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily YH65_07165 f1751bd79da1bf615f7609d9b52a8667 740 Gene3D G3DSA:3.90.650.10 31 371 1.3E-129 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily YH65_07165 f1751bd79da1bf615f7609d9b52a8667 740 Gene3D G3DSA:3.90.650.10 572 738 7.5E-31 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily YH65_07165 f1751bd79da1bf615f7609d9b52a8667 740 Pfam PF00586 AIR synthase related protein, N-terminal domain 458 562 3.5E-20 T 11-10-2018 IPR016188 PurM-like, N-terminal domain YH65_07165 f1751bd79da1bf615f7609d9b52a8667 740 Pfam PF00586 AIR synthase related protein, N-terminal domain 87 194 1.7E-22 T 11-10-2018 IPR016188 PurM-like, N-terminal domain YH65_07165 f1751bd79da1bf615f7609d9b52a8667 740 Pfam PF02769 AIR synthase related protein, C-terminal domain 577 711 5.9E-10 T 11-10-2018 IPR010918 PurM-like, C-terminal domain YH65_07165 f1751bd79da1bf615f7609d9b52a8667 740 Pfam PF02769 AIR synthase related protein, C-terminal domain 207 360 2.9E-32 T 11-10-2018 IPR010918 PurM-like, C-terminal domain YH65_07165 f1751bd79da1bf615f7609d9b52a8667 740 SUPERFAMILY SSF55326 401 570 6.93E-51 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily YH65_07165 f1751bd79da1bf615f7609d9b52a8667 740 TIGRFAM TIGR01736 FGAM_synth_II: phosphoribosylformylglycinamidine synthase II 17 735 1.2E-283 T 11-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 YH65_07165 f1751bd79da1bf615f7609d9b52a8667 740 SUPERFAMILY SSF56042 206 430 2.24E-51 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily YH65_07165 f1751bd79da1bf615f7609d9b52a8667 740 Gene3D G3DSA:3.30.1330.10 44 198 1.3E-129 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily YH65_07165 f1751bd79da1bf615f7609d9b52a8667 740 SUPERFAMILY SSF55326 15 201 5.83E-47 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily YH65_05290 35f04c667f534f69dad936d816b9a143 728 Gene3D G3DSA:3.20.20.450 477 727 2.0E-84 T 11-10-2018 IPR035919 EAL domain superfamily YH65_05290 35f04c667f534f69dad936d816b9a143 728 Gene3D G3DSA:3.30.450.20 164 291 1.3E-16 T 11-10-2018 YH65_05290 35f04c667f534f69dad936d816b9a143 728 SMART SM00267 286 463 2.5E-41 T 11-10-2018 IPR000160 GGDEF domain YH65_05290 35f04c667f534f69dad936d816b9a143 728 SUPERFAMILY SSF55073 302 464 2.67E-39 T 11-10-2018 IPR029787 Nucleotide cyclase YH65_05290 35f04c667f534f69dad936d816b9a143 728 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 293 460 9.1E-35 T 11-10-2018 IPR000160 GGDEF domain YH65_05290 35f04c667f534f69dad936d816b9a143 728 SUPERFAMILY SSF141868 479 725 1.31E-75 T 11-10-2018 IPR035919 EAL domain superfamily YH65_05290 35f04c667f534f69dad936d816b9a143 728 Pfam PF08448 PAS fold 183 287 3.1E-9 T 11-10-2018 IPR013656 PAS fold-4 YH65_05290 35f04c667f534f69dad936d816b9a143 728 Pfam PF00563 EAL domain 480 716 1.4E-62 T 11-10-2018 IPR001633 EAL domain YH65_05290 35f04c667f534f69dad936d816b9a143 728 Gene3D G3DSA:3.30.70.270 292 476 1.2E-48 T 11-10-2018 YH65_05290 35f04c667f534f69dad936d816b9a143 728 SUPERFAMILY SSF55785 164 279 5.41E-14 T 11-10-2018 IPR035965 PAS domain superfamily YH65_05290 35f04c667f534f69dad936d816b9a143 728 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 174 292 2.4E-8 T 11-10-2018 IPR000014 PAS domain YH65_05290 35f04c667f534f69dad936d816b9a143 728 Pfam PF00990 Diguanylate cyclase, GGDEF domain 297 457 5.2E-38 T 11-10-2018 IPR000160 GGDEF domain YH65_05290 35f04c667f534f69dad936d816b9a143 728 SMART SM00052 473 721 1.7E-80 T 11-10-2018 IPR001633 EAL domain YH65_05290 35f04c667f534f69dad936d816b9a143 728 SMART SM00091 177 243 2.1E-7 T 11-10-2018 IPR000014 PAS domain YH65_05800 204e0bda0d43ef1c11f07ee653aa0257 201 Gene3D G3DSA:1.10.340.30 22 138 2.3E-76 T 11-10-2018 YH65_05800 204e0bda0d43ef1c11f07ee653aa0257 201 SUPERFAMILY SSF48150 6 197 7.69E-42 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 YH65_05800 204e0bda0d43ef1c11f07ee653aa0257 201 Pfam PF00633 Helix-hairpin-helix motif 109 132 7.8E-8 T 11-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 YH65_05800 204e0bda0d43ef1c11f07ee653aa0257 201 PIRSF PIRSF001435 3 201 3.1E-43 T 11-10-2018 YH65_05800 204e0bda0d43ef1c11f07ee653aa0257 201 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 35 158 1.2E-12 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 YH65_05800 204e0bda0d43ef1c11f07ee653aa0257 201 SMART SM00478 39 196 5.1E-19 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 YH65_05800 204e0bda0d43ef1c11f07ee653aa0257 201 Gene3D G3DSA:1.10.1670.10 4 196 2.3E-76 T 11-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 YH65_10010 2d57e77d67646792a42bdea590bebbd4 406 Gene3D G3DSA:1.20.810.10 2 406 1.0E-119 T 11-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 YH65_10010 2d57e77d67646792a42bdea590bebbd4 406 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 289 389 3.1E-30 T 11-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 YH65_10010 2d57e77d67646792a42bdea590bebbd4 406 SUPERFAMILY SSF81648 241 382 6.54E-38 T 11-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 YH65_10010 2d57e77d67646792a42bdea590bebbd4 406 SUPERFAMILY SSF81342 14 291 5.49E-75 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 YH65_10010 2d57e77d67646792a42bdea590bebbd4 406 Pfam PF00033 Cytochrome b/b6/petB 32 217 9.5E-51 T 11-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 YH65_08515 82e2971b903169fbb00c900868b691e4 373 Pfam PF01266 FAD dependent oxidoreductase 3 353 1.7E-32 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 YH65_08515 82e2971b903169fbb00c900868b691e4 373 Gene3D G3DSA:3.50.50.60 3 353 7.6E-40 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_08515 82e2971b903169fbb00c900868b691e4 373 SUPERFAMILY SSF51905 1 343 1.04E-21 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_08515 82e2971b903169fbb00c900868b691e4 373 Gene3D G3DSA:3.30.9.10 88 323 7.6E-40 T 11-10-2018 YH65_08515 82e2971b903169fbb00c900868b691e4 373 SUPERFAMILY SSF54373 212 322 1.83E-11 T 11-10-2018 YH65_00315 4488d100050885c20e28be47e4d84f8e 363 Gene3D G3DSA:3.60.150.10 1 359 6.1E-147 T 11-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 YH65_00315 4488d100050885c20e28be47e4d84f8e 363 ProSitePatterns PS00789 Chorismate synthase signature 3. 316 332 - T 11-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 YH65_00315 4488d100050885c20e28be47e4d84f8e 363 ProSitePatterns PS00787 Chorismate synthase signature 1. 14 29 - T 11-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 YH65_00315 4488d100050885c20e28be47e4d84f8e 363 SUPERFAMILY SSF103263 2 348 2.49E-137 T 11-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 YH65_00315 4488d100050885c20e28be47e4d84f8e 363 ProSitePatterns PS00788 Chorismate synthase signature 2. 122 138 - T 11-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 YH65_00315 4488d100050885c20e28be47e4d84f8e 363 TIGRFAM TIGR00033 aroC: chorismate synthase 8 345 3.0E-128 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 YH65_00315 4488d100050885c20e28be47e4d84f8e 363 PIRSF PIRSF001456 1 358 5.8E-136 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 YH65_00315 4488d100050885c20e28be47e4d84f8e 363 Pfam PF01264 Chorismate synthase 8 342 4.4E-135 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 YH65_00315 4488d100050885c20e28be47e4d84f8e 363 Hamap MF_00300 Chorismate synthase [aroC]. 8 349 35.85 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 YH65_10475 3cc944797558e98128a4fec10d1d79ff 976 Pfam PF05192 MutS domain III 308 619 2.1E-24 T 11-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 YH65_10475 3cc944797558e98128a4fec10d1d79ff 976 Gene3D G3DSA:3.40.1170.10 10 139 8.2E-14 T 11-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 YH65_10475 3cc944797558e98128a4fec10d1d79ff 976 SUPERFAMILY SSF53150 137 305 5.89E-9 T 11-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 YH65_10475 3cc944797558e98128a4fec10d1d79ff 976 Gene3D G3DSA:3.40.50.300 628 910 1.6E-61 T 11-10-2018 YH65_10475 3cc944797558e98128a4fec10d1d79ff 976 Pfam PF01624 MutS domain I 25 135 1.5E-10 T 11-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 YH65_10475 3cc944797558e98128a4fec10d1d79ff 976 PIRSF PIRSF037677 27 930 7.3E-73 T 11-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 YH65_10475 3cc944797558e98128a4fec10d1d79ff 976 SUPERFAMILY SSF48334 318 626 6.54E-34 T 11-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily YH65_10475 3cc944797558e98128a4fec10d1d79ff 976 Pfam PF00488 MutS domain V 689 877 1.5E-39 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 YH65_10475 3cc944797558e98128a4fec10d1d79ff 976 SUPERFAMILY SSF55271 28 134 7.32E-13 T 11-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 YH65_10475 3cc944797558e98128a4fec10d1d79ff 976 Gene3D G3DSA:1.10.1420.10 319 619 3.4E-29 T 11-10-2018 YH65_10475 3cc944797558e98128a4fec10d1d79ff 976 Gene3D G3DSA:3.30.420.110 144 297 3.5E-5 T 11-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 YH65_10475 3cc944797558e98128a4fec10d1d79ff 976 Gene3D G3DSA:1.10.1420.10 418 562 3.4E-29 T 11-10-2018 YH65_10475 3cc944797558e98128a4fec10d1d79ff 976 SMART SM00533 320 651 2.7E-21 T 11-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 YH65_10475 3cc944797558e98128a4fec10d1d79ff 976 SMART SM00534 685 875 6.4E-47 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 YH65_10475 3cc944797558e98128a4fec10d1d79ff 976 SUPERFAMILY SSF52540 629 878 1.57E-27 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_09485 a7b5f37f2e15471f849c3f5ab70afa63 156 SUPERFAMILY SSF52833 1 155 4.84E-53 T 11-10-2018 IPR036249 Thioredoxin-like superfamily YH65_09485 a7b5f37f2e15471f849c3f5ab70afa63 156 Gene3D G3DSA:3.40.30.10 2 153 1.9E-48 T 11-10-2018 YH65_09485 a7b5f37f2e15471f849c3f5ab70afa63 156 PIRSF PIRSF000239 1 156 1.9E-29 T 11-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 YH65_09485 a7b5f37f2e15471f849c3f5ab70afa63 156 Pfam PF00578 AhpC/TSA family 4 132 3.9E-39 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 YH65_09145 75d4dc24055e1206e3ae67265bad3c03 661 Gene3D G3DSA:1.20.58.100 442 559 1.3E-36 T 11-10-2018 YH65_09145 75d4dc24055e1206e3ae67265bad3c03 661 Gene3D G3DSA:3.50.50.60 7 426 5.8E-141 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_09145 75d4dc24055e1206e3ae67265bad3c03 661 SUPERFAMILY SSF51905 3 438 6.49E-60 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_09145 75d4dc24055e1206e3ae67265bad3c03 661 Gene3D G3DSA:3.90.700.10 277 389 5.8E-141 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 YH65_09145 75d4dc24055e1206e3ae67265bad3c03 661 Gene3D G3DSA:1.10.472.70 560 651 3.1E-33 T 11-10-2018 YH65_09145 75d4dc24055e1206e3ae67265bad3c03 661 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 602 3.1E-220 T 11-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 YH65_09145 75d4dc24055e1206e3ae67265bad3c03 661 Pfam PF00890 FAD binding domain 7 415 1.4E-120 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 YH65_09145 75d4dc24055e1206e3ae67265bad3c03 661 SUPERFAMILY SSF46977 463 656 1.44E-54 T 11-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 YH65_09145 75d4dc24055e1206e3ae67265bad3c03 661 PIRSF PIRSF000171 1 592 6.0E-33 T 11-10-2018 YH65_09145 75d4dc24055e1206e3ae67265bad3c03 661 Pfam PF02910 Fumarate reductase flavoprotein C-term 473 602 1.6E-36 T 11-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 YH65_09145 75d4dc24055e1206e3ae67265bad3c03 661 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 41 50 - T 11-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 YH65_09145 75d4dc24055e1206e3ae67265bad3c03 661 SUPERFAMILY SSF56425 251 374 3.14E-36 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 YH65_03625 cd0f74037c9884821f4c483f2b60a5a9 183 SUPERFAMILY SSF54211 3 124 4.17E-34 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold YH65_03625 cd0f74037c9884821f4c483f2b60a5a9 183 Pfam PF01205 Uncharacterized protein family UPF0029 16 118 1.1E-24 T 11-10-2018 IPR001498 Impact, N-terminal YH65_03625 cd0f74037c9884821f4c483f2b60a5a9 183 Gene3D G3DSA:3.30.230.30 1 127 2.7E-37 T 11-10-2018 IPR036956 Impact, N-terminal domain superfamily YH65_02870 219baa8d6ad1343207752f6f0c724a81 1065 Pfam PF00072 Response regulator receiver domain 761 875 6.8E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YH65_02870 219baa8d6ad1343207752f6f0c724a81 1065 Gene3D G3DSA:3.40.50.12330 750 815 2.7E-23 T 11-10-2018 YH65_02870 219baa8d6ad1343207752f6f0c724a81 1065 SMART SM00388 379 444 2.9E-23 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YH65_02870 219baa8d6ad1343207752f6f0c724a81 1065 SUPERFAMILY SSF55874 433 606 2.23E-42 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YH65_02870 219baa8d6ad1343207752f6f0c724a81 1065 Pfam PF08376 Nitrate and nitrite sensing 54 288 7.1E-14 T 11-10-2018 IPR013587 Nitrate/nitrite sensing protein YH65_02870 219baa8d6ad1343207752f6f0c724a81 1065 Gene3D G3DSA:1.10.287.130 339 442 7.9E-25 T 11-10-2018 YH65_02870 219baa8d6ad1343207752f6f0c724a81 1065 SUPERFAMILY SSF52172 755 879 3.42E-37 T 11-10-2018 IPR011006 CheY-like superfamily YH65_02870 219baa8d6ad1343207752f6f0c724a81 1065 Gene3D G3DSA:3.30.565.10 445 609 1.0E-46 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YH65_02870 219baa8d6ad1343207752f6f0c724a81 1065 PRINTS PR00344 Bacterial sensor protein C-terminal signature 568 586 1.3E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YH65_02870 219baa8d6ad1343207752f6f0c724a81 1065 PRINTS PR00344 Bacterial sensor protein C-terminal signature 551 561 1.3E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YH65_02870 219baa8d6ad1343207752f6f0c724a81 1065 PRINTS PR00344 Bacterial sensor protein C-terminal signature 533 547 1.3E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YH65_02870 219baa8d6ad1343207752f6f0c724a81 1065 PRINTS PR00344 Bacterial sensor protein C-terminal signature 592 605 1.3E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YH65_02870 219baa8d6ad1343207752f6f0c724a81 1065 SUPERFAMILY SSF47384 367 445 7.85E-21 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 YH65_02870 219baa8d6ad1343207752f6f0c724a81 1065 SMART SM00448 759 875 2.6E-33 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YH65_02870 219baa8d6ad1343207752f6f0c724a81 1065 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 491 607 4.1E-26 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YH65_02870 219baa8d6ad1343207752f6f0c724a81 1065 Pfam PF00512 His Kinase A (phospho-acceptor) domain 380 443 3.6E-19 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YH65_02870 219baa8d6ad1343207752f6f0c724a81 1065 Gene3D G3DSA:3.40.50.2300 816 887 1.0E-18 T 11-10-2018 YH65_02870 219baa8d6ad1343207752f6f0c724a81 1065 SMART SM00387 491 610 1.1E-35 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YH65_01205 a473114581f21195847152b9bbc9023d 163 SUPERFAMILY SSF160369 1 156 3.53E-38 T 11-10-2018 YH65_01205 a473114581f21195847152b9bbc9023d 163 Gene3D G3DSA:3.30.70.1730 1 130 1.4E-28 T 11-10-2018 YH65_01205 a473114581f21195847152b9bbc9023d 163 Pfam PF00466 Ribosomal protein L10 1 89 3.2E-19 T 11-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 YH65_01205 a473114581f21195847152b9bbc9023d 163 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 1 157 21.173 T 11-10-2018 IPR022973 Ribosomal protein L10 YH65_06085 f0e1038052cf98031feff6589a4a232c 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 7.2E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YH65_06085 f0e1038052cf98031feff6589a4a232c 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 7.2E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YH65_06085 f0e1038052cf98031feff6589a4a232c 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 7.2E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YH65_06085 f0e1038052cf98031feff6589a4a232c 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 7.2E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YH65_06085 f0e1038052cf98031feff6589a4a232c 274 SUPERFAMILY SSF51735 4 255 9.83E-66 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily YH65_06085 f0e1038052cf98031feff6589a4a232c 274 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 251 1.4E-83 T 11-10-2018 YH65_06085 f0e1038052cf98031feff6589a4a232c 274 Gene3D G3DSA:3.40.50.720 7 200 2.7E-37 T 11-10-2018 YH65_06085 f0e1038052cf98031feff6589a4a232c 274 Gene3D G3DSA:1.10.8.400 202 258 1.2E-20 T 11-10-2018 YH65_06085 f0e1038052cf98031feff6589a4a232c 274 PIRSF PIRSF000094 1 259 2.1E-111 T 11-10-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 YH65_08320 a5a858fa0d96acbc53e81191c6711779 317 Gene3D G3DSA:3.50.50.60 134 249 8.8E-53 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_08320 a5a858fa0d96acbc53e81191c6711779 317 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 8 288 3.8E-54 T 11-10-2018 YH65_08320 a5a858fa0d96acbc53e81191c6711779 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 161 179 4.6E-20 T 11-10-2018 YH65_08320 a5a858fa0d96acbc53e81191c6711779 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 269 291 4.6E-20 T 11-10-2018 YH65_08320 a5a858fa0d96acbc53e81191c6711779 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 242 258 4.6E-20 T 11-10-2018 YH65_08320 a5a858fa0d96acbc53e81191c6711779 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 4.6E-20 T 11-10-2018 YH65_08320 a5a858fa0d96acbc53e81191c6711779 317 Gene3D G3DSA:3.50.50.60 6 292 8.8E-53 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_08320 a5a858fa0d96acbc53e81191c6711779 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 279 297 4.9E-17 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 YH65_08320 a5a858fa0d96acbc53e81191c6711779 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 6 28 4.9E-17 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 YH65_08320 a5a858fa0d96acbc53e81191c6711779 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 157 181 4.9E-17 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 YH65_08320 a5a858fa0d96acbc53e81191c6711779 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 122 130 4.9E-17 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 YH65_08320 a5a858fa0d96acbc53e81191c6711779 317 SUPERFAMILY SSF51905 5 315 6.57E-33 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_10590 c694956e478b5a389e52a7c01d901602 232 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 38.776 T 11-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 YH65_10590 c694956e478b5a389e52a7c01d901602 232 SUPERFAMILY SSF54814 2 105 4.3E-37 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 YH65_10590 c694956e478b5a389e52a7c01d901602 232 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 11-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_10590 c694956e478b5a389e52a7c01d901602 232 Pfam PF07650 KH domain 38 110 9.7E-16 T 11-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_10590 c694956e478b5a389e52a7c01d901602 232 Gene3D G3DSA:3.30.300.20 17 107 6.6E-28 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta YH65_10590 c694956e478b5a389e52a7c01d901602 232 SUPERFAMILY SSF54821 108 206 3.01E-39 T 11-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_10590 c694956e478b5a389e52a7c01d901602 232 Gene3D G3DSA:3.30.1140.32 108 208 3.6E-42 T 11-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_10590 c694956e478b5a389e52a7c01d901602 232 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 210 2.3E-93 T 11-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 YH65_10590 c694956e478b5a389e52a7c01d901602 232 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 1.5E-40 T 11-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_02905 1dcbeed1c0241bc082658fde17ac0ba6 371 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 353 363 - T 11-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site YH65_02905 1dcbeed1c0241bc082658fde17ac0ba6 371 Gene3D G3DSA:3.40.50.150 22 366 4.5E-123 T 11-10-2018 YH65_02905 1dcbeed1c0241bc082658fde17ac0ba6 371 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 12 371 41.311 T 11-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 YH65_02905 1dcbeed1c0241bc082658fde17ac0ba6 371 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 304 333 - T 11-10-2018 IPR030390 RNA methyltransferase TrmA, active site YH65_02905 1dcbeed1c0241bc082658fde17ac0ba6 371 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 19 371 7.2E-141 T 11-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 YH65_02905 1dcbeed1c0241bc082658fde17ac0ba6 371 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 19 371 2.5E-138 T 11-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 YH65_02905 1dcbeed1c0241bc082658fde17ac0ba6 371 SUPERFAMILY SSF53335 2 370 6.31E-57 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YH65_02905 1dcbeed1c0241bc082658fde17ac0ba6 371 Gene3D G3DSA:3.40.1350.30 53 193 4.5E-123 T 11-10-2018 YH65_06755 f1362c8a59cb4a3b98ebcd06329b6172 330 TIGRFAM TIGR04337 AmmeMemoSam_rS: AmmeMemoRadiSam system radical SAM enzyme 2 329 1.8E-110 T 11-10-2018 IPR027596 AmmeMemoRadiSam system radical SAM enzyme YH65_06755 f1362c8a59cb4a3b98ebcd06329b6172 330 PIRSF PIRSF004869 1 306 1.5E-102 T 11-10-2018 IPR016431 Pyruvate-formate lyase-activating enzyme, predicted YH65_06755 f1362c8a59cb4a3b98ebcd06329b6172 330 SUPERFAMILY SSF102114 43 307 1.44E-34 T 11-10-2018 YH65_06755 f1362c8a59cb4a3b98ebcd06329b6172 330 Gene3D G3DSA:3.20.20.70 62 281 5.4E-33 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YH65_06755 f1362c8a59cb4a3b98ebcd06329b6172 330 Pfam PF04055 Radical SAM superfamily 77 231 2.0E-20 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 YH65_05935 b4528419b48835489a387608cf311ab3 861 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 307 313 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 YH65_05935 b4528419b48835489a387608cf311ab3 861 Pfam PF00690 Cation transporter/ATPase, N-terminus 10 63 2.0E-14 T 11-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 YH65_05935 b4528419b48835489a387608cf311ab3 861 Pfam PF00122 E1-E2 ATPase 104 285 2.5E-50 T 11-10-2018 YH65_05935 b4528419b48835489a387608cf311ab3 861 Pfam PF00702 haloacid dehalogenase-like hydrolase 574 619 4.1E-6 T 11-10-2018 YH65_05935 b4528419b48835489a387608cf311ab3 861 SMART SM00831 3 68 1.6E-14 T 11-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 YH65_05935 b4528419b48835489a387608cf311ab3 861 Pfam PF00702 haloacid dehalogenase-like hydrolase 301 509 2.2E-9 T 11-10-2018 YH65_05935 b4528419b48835489a387608cf311ab3 861 SUPERFAMILY SSF56784 301 655 3.98E-41 T 11-10-2018 IPR036412 HAD-like superfamily YH65_05935 b4528419b48835489a387608cf311ab3 861 SUPERFAMILY SSF81665 3 853 3.01E-87 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 YH65_05935 b4528419b48835489a387608cf311ab3 861 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 305 319 9.5E-30 T 11-10-2018 YH65_05935 b4528419b48835489a387608cf311ab3 861 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 605 624 9.5E-30 T 11-10-2018 YH65_05935 b4528419b48835489a387608cf311ab3 861 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 628 640 9.5E-30 T 11-10-2018 YH65_05935 b4528419b48835489a387608cf311ab3 861 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 154 168 9.5E-30 T 11-10-2018 YH65_05935 b4528419b48835489a387608cf311ab3 861 Gene3D G3DSA:1.20.1110.10 587 851 4.3E-63 T 11-10-2018 YH65_05935 b4528419b48835489a387608cf311ab3 861 Gene3D G3DSA:1.20.1110.10 196 320 1.2E-29 T 11-10-2018 YH65_05935 b4528419b48835489a387608cf311ab3 861 SUPERFAMILY SSF81653 106 204 1.57E-27 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 YH65_05935 b4528419b48835489a387608cf311ab3 861 Gene3D G3DSA:3.40.1110.10 321 455 2.1E-29 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 YH65_05935 b4528419b48835489a387608cf311ab3 861 Gene3D G3DSA:2.60.120.1500 104 195 9.2E-31 T 11-10-2018 YH65_05935 b4528419b48835489a387608cf311ab3 861 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 579 695 1.1E-29 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 YH65_05935 b4528419b48835489a387608cf311ab3 861 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 75 341 6.7E-44 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 YH65_05935 b4528419b48835489a387608cf311ab3 861 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 419 437 9.6E-6 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 YH65_05935 b4528419b48835489a387608cf311ab3 861 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 767 788 9.6E-6 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 YH65_01985 9516f73be7ceec5c25266a760093b205 248 SUPERFAMILY SSF52172 14 199 1.71E-31 T 11-10-2018 IPR011006 CheY-like superfamily YH65_01985 9516f73be7ceec5c25266a760093b205 248 SMART SM00448 14 131 9.0E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YH65_01985 9516f73be7ceec5c25266a760093b205 248 SMART SM00862 170 241 2.0E-10 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YH65_01985 9516f73be7ceec5c25266a760093b205 248 Gene3D G3DSA:3.40.50.2300 10 142 5.2E-29 T 11-10-2018 YH65_01985 9516f73be7ceec5c25266a760093b205 248 Pfam PF00072 Response regulator receiver domain 16 130 5.1E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YH65_01985 9516f73be7ceec5c25266a760093b205 248 Gene3D G3DSA:1.10.10.10 155 245 2.4E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YH65_01985 9516f73be7ceec5c25266a760093b205 248 Pfam PF00486 Transcriptional regulatory protein, C terminal 172 241 9.0E-12 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YH65_10880 6a207f351df086138b3cf9aad363b4c5 443 Gene3D G3DSA:1.10.40.30 349 440 6.1E-28 T 11-10-2018 YH65_10880 6a207f351df086138b3cf9aad363b4c5 443 Pfam PF10397 Adenylosuccinate lyase C-terminus 350 440 1.2E-27 T 11-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 YH65_10880 6a207f351df086138b3cf9aad363b4c5 443 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 1 441 3.7E-164 T 11-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 YH65_10880 6a207f351df086138b3cf9aad363b4c5 443 Pfam PF00206 Lyase 7 282 2.5E-53 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal YH65_10880 6a207f351df086138b3cf9aad363b4c5 443 PRINTS PR00149 Fumarate lyase superfamily signature 216 243 1.5E-24 T 11-10-2018 IPR000362 Fumarate lyase family YH65_10880 6a207f351df086138b3cf9aad363b4c5 443 PRINTS PR00149 Fumarate lyase superfamily signature 88 106 1.5E-24 T 11-10-2018 IPR000362 Fumarate lyase family YH65_10880 6a207f351df086138b3cf9aad363b4c5 443 PRINTS PR00149 Fumarate lyase superfamily signature 261 277 1.5E-24 T 11-10-2018 IPR000362 Fumarate lyase family YH65_10880 6a207f351df086138b3cf9aad363b4c5 443 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 1.5E-24 T 11-10-2018 IPR000362 Fumarate lyase family YH65_10880 6a207f351df086138b3cf9aad363b4c5 443 PRINTS PR00145 Argininosuccinate lyase family signature 216 240 1.3E-7 T 11-10-2018 YH65_10880 6a207f351df086138b3cf9aad363b4c5 443 PRINTS PR00145 Argininosuccinate lyase family signature 128 148 1.3E-7 T 11-10-2018 YH65_10880 6a207f351df086138b3cf9aad363b4c5 443 PRINTS PR00145 Argininosuccinate lyase family signature 87 109 1.3E-7 T 11-10-2018 YH65_10880 6a207f351df086138b3cf9aad363b4c5 443 PRINTS PR00145 Argininosuccinate lyase family signature 261 277 1.3E-7 T 11-10-2018 YH65_10880 6a207f351df086138b3cf9aad363b4c5 443 SUPERFAMILY SSF48557 3 441 2.67E-127 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 YH65_10880 6a207f351df086138b3cf9aad363b4c5 443 Gene3D G3DSA:1.10.275.10 1 92 1.2E-33 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal YH65_10880 6a207f351df086138b3cf9aad363b4c5 443 SMART SM00998 349 441 1.1E-39 T 11-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 YH65_10880 6a207f351df086138b3cf9aad363b4c5 443 Gene3D G3DSA:1.20.200.10 93 348 1.8E-88 T 11-10-2018 YH65_10880 6a207f351df086138b3cf9aad363b4c5 443 ProSitePatterns PS00163 Fumarate lyases signature. 261 270 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 YH65_07930 47359b653113263c450b28cf61ef7fa7 568 SUPERFAMILY SSF55826 219 373 3.92E-21 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 YH65_07930 47359b653113263c450b28cf61ef7fa7 568 Pfam PF04073 Aminoacyl-tRNA editing domain 258 375 4.9E-19 T 11-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 YH65_07930 47359b653113263c450b28cf61ef7fa7 568 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 2 564 2.2E-208 T 11-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 YH65_07930 47359b653113263c450b28cf61ef7fa7 568 Gene3D G3DSA:3.90.960.10 241 389 5.6E-216 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 YH65_07930 47359b653113263c450b28cf61ef7fa7 568 Gene3D G3DSA:3.30.930.10 11 465 5.6E-216 T 11-10-2018 YH65_07930 47359b653113263c450b28cf61ef7fa7 568 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 568 36.889 T 11-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 YH65_07930 47359b653113263c450b28cf61ef7fa7 568 PRINTS PR01046 Prolyl-tRNA synthetase signature 145 156 1.6E-15 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 YH65_07930 47359b653113263c450b28cf61ef7fa7 568 PRINTS PR01046 Prolyl-tRNA synthetase signature 105 116 1.6E-15 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 YH65_07930 47359b653113263c450b28cf61ef7fa7 568 PRINTS PR01046 Prolyl-tRNA synthetase signature 69 87 1.6E-15 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 YH65_07930 47359b653113263c450b28cf61ef7fa7 568 PRINTS PR01046 Prolyl-tRNA synthetase signature 135 143 1.6E-15 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 YH65_07930 47359b653113263c450b28cf61ef7fa7 568 SUPERFAMILY SSF52954 464 567 1.96E-21 T 11-10-2018 YH65_07930 47359b653113263c450b28cf61ef7fa7 568 Pfam PF03129 Anticodon binding domain 479 565 3.6E-14 T 11-10-2018 IPR004154 Anticodon-binding YH65_07930 47359b653113263c450b28cf61ef7fa7 568 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 96 459 3.8E-49 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 YH65_07930 47359b653113263c450b28cf61ef7fa7 568 Gene3D G3DSA:3.40.50.800 4 548 5.6E-216 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily YH65_07930 47359b653113263c450b28cf61ef7fa7 568 SUPERFAMILY SSF55681 10 475 5.87E-89 T 11-10-2018 YH65_06100 672bc0bbf751db9f6a5442cff25bf015 249 Gene3D G3DSA:3.60.10.10 24 247 3.7E-18 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily YH65_06100 672bc0bbf751db9f6a5442cff25bf015 249 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 31 238 4.6E-6 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase YH65_06100 672bc0bbf751db9f6a5442cff25bf015 249 SUPERFAMILY SSF56219 22 246 2.09E-20 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily YH65_08380 db6100e180d27ac031aff36e8512414c 552 SUPERFAMILY SSF50249 25 105 8.99E-5 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold YH65_08380 db6100e180d27ac031aff36e8512414c 552 PRINTS PR00681 Ribosomal protein S1 signature 28 46 7.4E-32 T 11-10-2018 YH65_08380 db6100e180d27ac031aff36e8512414c 552 PRINTS PR00681 Ribosomal protein S1 signature 216 237 7.4E-32 T 11-10-2018 YH65_08380 db6100e180d27ac031aff36e8512414c 552 PRINTS PR00681 Ribosomal protein S1 signature 113 129 7.4E-32 T 11-10-2018 YH65_08380 db6100e180d27ac031aff36e8512414c 552 PRINTS PR00681 Ribosomal protein S1 signature 159 179 7.4E-32 T 11-10-2018 YH65_08380 db6100e180d27ac031aff36e8512414c 552 PRINTS PR00681 Ribosomal protein S1 signature 334 352 7.4E-32 T 11-10-2018 YH65_08380 db6100e180d27ac031aff36e8512414c 552 PRINTS PR00681 Ribosomal protein S1 signature 294 313 7.4E-32 T 11-10-2018 YH65_08380 db6100e180d27ac031aff36e8512414c 552 Gene3D G3DSA:2.40.50.140 189 274 2.1E-20 T 11-10-2018 YH65_08380 db6100e180d27ac031aff36e8512414c 552 Gene3D G3DSA:2.40.50.140 275 362 1.4E-24 T 11-10-2018 YH65_08380 db6100e180d27ac031aff36e8512414c 552 SUPERFAMILY SSF50249 264 357 8.95E-23 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold YH65_08380 db6100e180d27ac031aff36e8512414c 552 Pfam PF00575 S1 RNA binding domain 280 351 5.0E-20 T 11-10-2018 IPR003029 S1 domain GO:0003676 YH65_08380 db6100e180d27ac031aff36e8512414c 552 Pfam PF00575 S1 RNA binding domain 109 175 1.4E-5 T 11-10-2018 IPR003029 S1 domain GO:0003676 YH65_08380 db6100e180d27ac031aff36e8512414c 552 Pfam PF00575 S1 RNA binding domain 199 264 1.1E-14 T 11-10-2018 IPR003029 S1 domain GO:0003676 YH65_08380 db6100e180d27ac031aff36e8512414c 552 Pfam PF00575 S1 RNA binding domain 450 518 2.1E-7 T 11-10-2018 IPR003029 S1 domain GO:0003676 YH65_08380 db6100e180d27ac031aff36e8512414c 552 Pfam PF00575 S1 RNA binding domain 366 436 5.4E-23 T 11-10-2018 IPR003029 S1 domain GO:0003676 YH65_08380 db6100e180d27ac031aff36e8512414c 552 Gene3D G3DSA:2.40.50.140 98 188 4.9E-7 T 11-10-2018 YH65_08380 db6100e180d27ac031aff36e8512414c 552 Gene3D G3DSA:2.40.50.140 12 97 3.1E-6 T 11-10-2018 YH65_08380 db6100e180d27ac031aff36e8512414c 552 SUPERFAMILY SSF50249 112 179 1.72E-10 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold YH65_08380 db6100e180d27ac031aff36e8512414c 552 SUPERFAMILY SSF50249 195 273 4.09E-20 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold YH65_08380 db6100e180d27ac031aff36e8512414c 552 Gene3D G3DSA:2.40.50.140 450 527 1.4E-12 T 11-10-2018 YH65_08380 db6100e180d27ac031aff36e8512414c 552 SUPERFAMILY SSF50249 365 448 1.19E-24 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold YH65_08380 db6100e180d27ac031aff36e8512414c 552 SMART SM00316 26 92 7.1 T 11-10-2018 IPR022967 RNA-binding domain, S1 YH65_08380 db6100e180d27ac031aff36e8512414c 552 SMART SM00316 451 518 1.2E-13 T 11-10-2018 IPR022967 RNA-binding domain, S1 YH65_08380 db6100e180d27ac031aff36e8512414c 552 SMART SM00316 279 351 7.0E-23 T 11-10-2018 IPR022967 RNA-binding domain, S1 YH65_08380 db6100e180d27ac031aff36e8512414c 552 SMART SM00316 194 264 3.0E-20 T 11-10-2018 IPR022967 RNA-binding domain, S1 YH65_08380 db6100e180d27ac031aff36e8512414c 552 SMART SM00316 366 436 4.5E-26 T 11-10-2018 IPR022967 RNA-binding domain, S1 YH65_08380 db6100e180d27ac031aff36e8512414c 552 SMART SM00316 108 175 1.3E-4 T 11-10-2018 IPR022967 RNA-binding domain, S1 YH65_08380 db6100e180d27ac031aff36e8512414c 552 SUPERFAMILY SSF50249 437 532 8.88E-15 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold YH65_08380 db6100e180d27ac031aff36e8512414c 552 Gene3D G3DSA:2.40.50.140 363 445 9.3E-28 T 11-10-2018 YH65_06730 d8b43a8802db9c284e56a8c0a926765a 369 Gene3D G3DSA:3.90.730.10 146 367 3.2E-64 T 11-10-2018 IPR036430 Ribonuclease T2-like superfamily GO:0003723|GO:0033897 Reactome: R-HSA-6798695 YH65_06730 d8b43a8802db9c284e56a8c0a926765a 369 ProSitePatterns PS00530 Ribonuclease T2 family histidine active site 1. 195 202 - T 11-10-2018 IPR018188 Ribonuclease T2, His active site 1 GO:0003723|GO:0033897 Reactome: R-HSA-6798695 YH65_06730 d8b43a8802db9c284e56a8c0a926765a 369 SUPERFAMILY SSF55895 156 361 3.14E-29 T 11-10-2018 IPR036430 Ribonuclease T2-like superfamily GO:0003723|GO:0033897 Reactome: R-HSA-6798695 YH65_06730 d8b43a8802db9c284e56a8c0a926765a 369 Pfam PF00445 Ribonuclease T2 family 159 326 5.3E-18 T 11-10-2018 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 Reactome: R-HSA-6798695 YH65_06730 d8b43a8802db9c284e56a8c0a926765a 369 ProSitePatterns PS00531 Ribonuclease T2 family histidine active site 2. 252 263 - T 11-10-2018 IPR033130 Ribonuclease T2, His active site 2 Reactome: R-HSA-6798695 YH65_10390 e28c05d710e5ca68c40f541e087c355c 311 SUPERFAMILY SSF103247 39 154 1.57E-13 T 11-10-2018 IPR035923 TT1751-like domain superfamily YH65_10390 e28c05d710e5ca68c40f541e087c355c 311 Gene3D G3DSA:3.30.310.70 31 154 1.1E-6 T 11-10-2018 IPR035923 TT1751-like domain superfamily YH65_10390 e28c05d710e5ca68c40f541e087c355c 311 Pfam PF03625 Domain of unknown function DUF302 218 269 7.6E-5 T 11-10-2018 IPR005180 Domain of unknown function DUF302 YH65_10390 e28c05d710e5ca68c40f541e087c355c 311 Gene3D G3DSA:3.30.310.70 183 307 6.5E-6 T 11-10-2018 IPR035923 TT1751-like domain superfamily YH65_10390 e28c05d710e5ca68c40f541e087c355c 311 SUPERFAMILY SSF103247 187 308 1.44E-19 T 11-10-2018 IPR035923 TT1751-like domain superfamily YH65_10445 0cf7632ef85cc0570943b825046bd369 123 Gene3D G3DSA:1.10.760.10 31 121 2.4E-14 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_10445 0cf7632ef85cc0570943b825046bd369 123 Pfam PF00034 Cytochrome c 33 123 8.9E-10 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YH65_10445 0cf7632ef85cc0570943b825046bd369 123 SUPERFAMILY SSF46626 8 122 6.26E-12 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_00280 1c93e7377bf57314899cdbd5fd71ca27 445 SUPERFAMILY SSF56935 95 429 5.86E-8 T 11-10-2018 YH65_00280 1c93e7377bf57314899cdbd5fd71ca27 445 SUPERFAMILY SSF160459 34 87 3.79E-5 T 11-10-2018 YH65_01905 38bfbfb123f30d1714a32b0a8927b11c 386 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 11-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 YH65_01905 38bfbfb123f30d1714a32b0a8927b11c 386 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 234 373 6.8E-67 T 11-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 YH65_01905 38bfbfb123f30d1714a32b0a8927b11c 386 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 3 384 55.298 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 YH65_01905 38bfbfb123f30d1714a32b0a8927b11c 386 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 260 268 - T 11-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 YH65_01905 38bfbfb123f30d1714a32b0a8927b11c 386 Gene3D G3DSA:3.30.300.10 103 376 6.0E-167 T 11-10-2018 YH65_01905 38bfbfb123f30d1714a32b0a8927b11c 386 SUPERFAMILY SSF55973 234 385 1.33E-66 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 YH65_01905 38bfbfb123f30d1714a32b0a8927b11c 386 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 6 383 4.0E-179 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 YH65_01905 38bfbfb123f30d1714a32b0a8927b11c 386 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 232 6.5E-45 T 11-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 YH65_01905 38bfbfb123f30d1714a32b0a8927b11c 386 Gene3D G3DSA:3.30.300.10 6 234 6.0E-167 T 11-10-2018 YH65_01905 38bfbfb123f30d1714a32b0a8927b11c 386 SUPERFAMILY SSF55973 110 233 5.89E-47 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 YH65_01905 38bfbfb123f30d1714a32b0a8927b11c 386 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 5 102 2.5E-38 T 11-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 YH65_01905 38bfbfb123f30d1714a32b0a8927b11c 386 Gene3D G3DSA:3.30.300.10 12 271 6.0E-167 T 11-10-2018 YH65_01905 38bfbfb123f30d1714a32b0a8927b11c 386 SUPERFAMILY SSF55973 4 110 8.63E-42 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 YH65_01905 38bfbfb123f30d1714a32b0a8927b11c 386 PIRSF PIRSF000497 1 385 3.5E-169 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 YH65_03375 47969e624cf91b21a803c045922aa2b1 399 Pfam PF00579 tRNA synthetases class I (W and Y) 36 321 2.8E-78 T 11-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 YH65_03375 47969e624cf91b21a803c045922aa2b1 399 Gene3D G3DSA:1.10.240.10 225 326 1.6E-20 T 11-10-2018 YH65_03375 47969e624cf91b21a803c045922aa2b1 399 SUPERFAMILY SSF52374 3 317 8.23E-84 T 11-10-2018 YH65_03375 47969e624cf91b21a803c045922aa2b1 399 Gene3D G3DSA:3.10.290.10 327 398 5.2E-19 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 YH65_03375 47969e624cf91b21a803c045922aa2b1 399 Gene3D G3DSA:3.40.50.620 2 220 6.1E-65 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YH65_03375 47969e624cf91b21a803c045922aa2b1 399 SMART SM00363 338 399 9.3E-6 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_03375 47969e624cf91b21a803c045922aa2b1 399 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 1 398 43.44 T 11-10-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 YH65_03375 47969e624cf91b21a803c045922aa2b1 399 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 3 399 3.8E-118 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 YH65_03375 47969e624cf91b21a803c045922aa2b1 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 180 202 3.7E-23 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 YH65_03375 47969e624cf91b21a803c045922aa2b1 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 48 70 3.7E-23 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 YH65_03375 47969e624cf91b21a803c045922aa2b1 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 163 178 3.7E-23 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 YH65_03375 47969e624cf91b21a803c045922aa2b1 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 214 226 3.7E-23 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 YH65_03375 47969e624cf91b21a803c045922aa2b1 399 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 44 54 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 YH65_03375 47969e624cf91b21a803c045922aa2b1 399 Pfam PF01479 S4 domain 342 383 3.1E-8 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_03375 47969e624cf91b21a803c045922aa2b1 399 SUPERFAMILY SSF55174 325 398 4.71E-17 T 11-10-2018 YH65_00525 a970e6b6805e0beb387b0a8dbdfd8f31 296 Gene3D G3DSA:1.20.120.1780 178 296 1.3E-32 T 11-10-2018 YH65_00525 a970e6b6805e0beb387b0a8dbdfd8f31 296 Gene3D G3DSA:1.10.357.140 21 177 6.0E-44 T 11-10-2018 YH65_00525 a970e6b6805e0beb387b0a8dbdfd8f31 296 TIGRFAM TIGR01475 ubiA_other: putative 4-hydroxybenzoate polyprenyltransferase 14 296 8.2E-91 T 11-10-2018 IPR006371 4-hydroxybenzoate polyprenyltransferase-related YH65_00525 a970e6b6805e0beb387b0a8dbdfd8f31 296 Pfam PF01040 UbiA prenyltransferase family 36 277 2.5E-45 T 11-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 YH65_01855 5a6cf16d0166fbe42833f6f213395890 331 PIRSF PIRSF036915 4 331 2.9E-76 T 11-10-2018 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 YH65_01855 5a6cf16d0166fbe42833f6f213395890 331 Gene3D G3DSA:3.20.20.70 4 330 2.2E-99 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YH65_01855 5a6cf16d0166fbe42833f6f213395890 331 ProSitePatterns PS01054 Transaldolase signature 1. 35 43 - T 11-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 YH65_01855 5a6cf16d0166fbe42833f6f213395890 331 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 10 330 9.2E-84 T 11-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 YH65_01855 5a6cf16d0166fbe42833f6f213395890 331 Hamap MF_00493 Transaldolase [tal]. 1 331 95.519 T 11-10-2018 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 YH65_01855 5a6cf16d0166fbe42833f6f213395890 331 TIGRFAM TIGR00876 tal_mycobact: transaldolase 7 328 1.9E-90 T 11-10-2018 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 YH65_01855 5a6cf16d0166fbe42833f6f213395890 331 SUPERFAMILY SSF51569 6 330 1.71E-70 T 11-10-2018 YH65_09045 77a12d5056601bc6371a635671562b24 488 Pfam PF00224 Pyruvate kinase, barrel domain 3 340 2.4E-118 T 11-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 YH65_09045 77a12d5056601bc6371a635671562b24 488 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 3 469 2.4E-143 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 YH65_09045 77a12d5056601bc6371a635671562b24 488 ProSitePatterns PS00110 Pyruvate kinase active site signature. 217 229 - T 11-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 YH65_09045 77a12d5056601bc6371a635671562b24 488 Pfam PF02887 Pyruvate kinase, alpha/beta domain 357 469 1.4E-27 T 11-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 YH65_09045 77a12d5056601bc6371a635671562b24 488 Gene3D G3DSA:2.40.33.10 71 171 5.8E-158 T 11-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 YH65_09045 77a12d5056601bc6371a635671562b24 488 PRINTS PR01050 Pyruvate kinase family signature 271 295 5.0E-56 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 YH65_09045 77a12d5056601bc6371a635671562b24 488 PRINTS PR01050 Pyruvate kinase family signature 296 314 5.0E-56 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 YH65_09045 77a12d5056601bc6371a635671562b24 488 PRINTS PR01050 Pyruvate kinase family signature 246 270 5.0E-56 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 YH65_09045 77a12d5056601bc6371a635671562b24 488 PRINTS PR01050 Pyruvate kinase family signature 315 331 5.0E-56 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 YH65_09045 77a12d5056601bc6371a635671562b24 488 PRINTS PR01050 Pyruvate kinase family signature 60 76 5.0E-56 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 YH65_09045 77a12d5056601bc6371a635671562b24 488 PRINTS PR01050 Pyruvate kinase family signature 219 245 5.0E-56 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 YH65_09045 77a12d5056601bc6371a635671562b24 488 PRINTS PR01050 Pyruvate kinase family signature 189 203 5.0E-56 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 YH65_09045 77a12d5056601bc6371a635671562b24 488 SUPERFAMILY SSF50800 71 169 4.54E-20 T 11-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily YH65_09045 77a12d5056601bc6371a635671562b24 488 SUPERFAMILY SSF51621 2 342 2.58E-88 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 YH65_09045 77a12d5056601bc6371a635671562b24 488 SUPERFAMILY SSF52935 325 470 1.83E-31 T 11-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 YH65_09045 77a12d5056601bc6371a635671562b24 488 Gene3D G3DSA:3.20.20.60 3 337 5.8E-158 T 11-10-2018 YH65_09045 77a12d5056601bc6371a635671562b24 488 Gene3D G3DSA:3.40.1380.20 338 467 5.8E-158 T 11-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 YH65_00805 bd4ed995064596b12333cc166d2e10b1 228 Pfam PF00005 ABC transporter 24 173 5.0E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YH65_00805 bd4ed995064596b12333cc166d2e10b1 228 SMART SM00382 33 222 1.3E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain YH65_00805 bd4ed995064596b12333cc166d2e10b1 228 SUPERFAMILY SSF52540 3 225 2.26E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_00805 bd4ed995064596b12333cc166d2e10b1 228 Gene3D G3DSA:3.40.50.300 2 226 1.5E-59 T 11-10-2018 YH65_05860 54952239174ca0b92f357c134c2d84fe 445 SUPERFAMILY SSF51230 3 93 6.54E-25 T 11-10-2018 IPR011053 Single hybrid motif YH65_05860 54952239174ca0b92f357c134c2d84fe 445 Gene3D G3DSA:3.30.559.10 226 442 3.6E-37 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 YH65_05860 54952239174ca0b92f357c134c2d84fe 445 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 253 434 6.9E-33 T 11-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 YH65_05860 54952239174ca0b92f357c134c2d84fe 445 SUPERFAMILY SSF52777 251 436 1.91E-37 T 11-10-2018 YH65_05860 54952239174ca0b92f357c134c2d84fe 445 Gene3D G3DSA:2.40.50.100 2 101 3.3E-27 T 11-10-2018 YH65_05860 54952239174ca0b92f357c134c2d84fe 445 Pfam PF00364 Biotin-requiring enzyme 5 76 4.9E-20 T 11-10-2018 IPR000089 Biotin/lipoyl attachment YH65_05860 54952239174ca0b92f357c134c2d84fe 445 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 YH65_02775 9e9cdb4a89056eaa557e09836da3eb76 116 Gene3D G3DSA:3.30.70.120 2 101 1.4E-5 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal YH65_02775 9e9cdb4a89056eaa557e09836da3eb76 116 SUPERFAMILY SSF54913 2 100 4.45E-9 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta YH65_09755 b12a13a280c3ccf7a51b71248e7054b9 698 SUPERFAMILY SSF51998 123 692 4.27E-138 T 11-10-2018 YH65_09755 b12a13a280c3ccf7a51b71248e7054b9 698 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 122 692 1.6E-164 T 11-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 YH65_09755 b12a13a280c3ccf7a51b71248e7054b9 698 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 121 693 2.1E-121 T 11-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 YH65_09755 b12a13a280c3ccf7a51b71248e7054b9 698 Gene3D G3DSA:3.20.70.20 133 281 4.3E-25 T 11-10-2018 YH65_09755 b12a13a280c3ccf7a51b71248e7054b9 698 Gene3D G3DSA:3.20.70.20 304 698 8.2E-73 T 11-10-2018 YH65_09755 b12a13a280c3ccf7a51b71248e7054b9 698 Pfam PF03477 ATP cone domain 4 86 1.4E-19 T 11-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 YH65_07870 cdca9c6bda0836c25ae74aae52e1efbe 246 SUPERFAMILY SSF81345 5 233 2.22E-7 T 11-10-2018 IPR037294 ABC transporter, BtuC-like YH65_07870 cdca9c6bda0836c25ae74aae52e1efbe 246 Pfam PF00950 ABC 3 transport family 6 241 8.0E-8 T 11-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 YH65_09025 a3aa46b34b1dd52fb23b18ac9924cc79 286 Pfam PF01145 SPFH domain / Band 7 family 25 194 2.8E-32 T 11-10-2018 IPR001107 Band 7 domain YH65_09025 a3aa46b34b1dd52fb23b18ac9924cc79 286 SMART SM00244 21 179 8.1E-51 T 11-10-2018 IPR001107 Band 7 domain YH65_09025 a3aa46b34b1dd52fb23b18ac9924cc79 286 Gene3D G3DSA:3.30.479.30 49 181 1.3E-37 T 11-10-2018 YH65_09025 a3aa46b34b1dd52fb23b18ac9924cc79 286 SUPERFAMILY SSF117892 52 186 1.14E-37 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily YH65_09025 a3aa46b34b1dd52fb23b18ac9924cc79 286 PRINTS PR00721 Stomatin signature 174 195 1.5E-25 T 11-10-2018 IPR001972 Stomatin family GO:0016020 YH65_09025 a3aa46b34b1dd52fb23b18ac9924cc79 286 PRINTS PR00721 Stomatin signature 76 97 1.5E-25 T 11-10-2018 IPR001972 Stomatin family GO:0016020 YH65_09025 a3aa46b34b1dd52fb23b18ac9924cc79 286 PRINTS PR00721 Stomatin signature 111 128 1.5E-25 T 11-10-2018 IPR001972 Stomatin family GO:0016020 YH65_09025 a3aa46b34b1dd52fb23b18ac9924cc79 286 PRINTS PR00721 Stomatin signature 155 173 1.5E-25 T 11-10-2018 IPR001972 Stomatin family GO:0016020 YH65_09025 a3aa46b34b1dd52fb23b18ac9924cc79 286 PRINTS PR00721 Stomatin signature 28 50 1.5E-25 T 11-10-2018 IPR001972 Stomatin family GO:0016020 YH65_09025 a3aa46b34b1dd52fb23b18ac9924cc79 286 PRINTS PR00721 Stomatin signature 131 154 1.5E-25 T 11-10-2018 IPR001972 Stomatin family GO:0016020 YH65_10290 4c726cc79b993b18edf3b91514bda200 189 Gene3D G3DSA:2.40.440.10 20 189 6.5E-21 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like YH65_10290 4c726cc79b993b18edf3b91514bda200 189 Pfam PF03734 L,D-transpeptidase catalytic domain 52 188 5.5E-18 T 11-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 YH65_10290 4c726cc79b993b18edf3b91514bda200 189 SUPERFAMILY SSF141523 52 188 1.12E-25 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like YH65_07685 c6c0f509748314482bffcc1c034923b7 216 SUPERFAMILY SSF46894 122 214 3.12E-19 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YH65_07685 c6c0f509748314482bffcc1c034923b7 216 SMART SM00862 142 213 3.9E-15 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YH65_07685 c6c0f509748314482bffcc1c034923b7 216 Pfam PF00486 Transcriptional regulatory protein, C terminal 143 212 3.0E-15 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YH65_07685 c6c0f509748314482bffcc1c034923b7 216 Pfam PF00072 Response regulator receiver domain 3 113 7.4E-18 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YH65_07685 c6c0f509748314482bffcc1c034923b7 216 SUPERFAMILY SSF52172 1 118 1.71E-24 T 11-10-2018 IPR011006 CheY-like superfamily YH65_07685 c6c0f509748314482bffcc1c034923b7 216 Gene3D G3DSA:3.40.50.2300 1 121 1.3E-26 T 11-10-2018 YH65_07685 c6c0f509748314482bffcc1c034923b7 216 SMART SM00448 1 112 1.5E-18 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YH65_07685 c6c0f509748314482bffcc1c034923b7 216 Gene3D G3DSA:1.10.10.10 122 216 6.9E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YH65_04890 ec6c435bc0a876f9f2ccd6ab6ecfcc64 191 SUPERFAMILY SSF53335 8 178 1.62E-14 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YH65_04890 ec6c435bc0a876f9f2ccd6ab6ecfcc64 191 Gene3D G3DSA:3.40.50.150 3 185 4.1E-12 T 11-10-2018 YH65_10560 55ae70c0b152e6e0c4714e507129996c 193 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 190 2.5E-49 T 11-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_10560 55ae70c0b152e6e0c4714e507129996c 193 Pfam PF00297 Ribosomal protein L3 98 161 1.7E-7 T 11-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YH65_10560 55ae70c0b152e6e0c4714e507129996c 193 SUPERFAMILY SSF50447 2 190 8.12E-45 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily YH65_10560 55ae70c0b152e6e0c4714e507129996c 193 Gene3D G3DSA:2.40.30.10 120 193 1.8E-7 T 11-10-2018 YH65_02535 d972b4a42af8a25485b0435c3d8dbb6e 806 SUPERFAMILY SSF88697 13 200 2.49E-18 T 11-10-2018 IPR015947 PUA-like superfamily YH65_02535 d972b4a42af8a25485b0435c3d8dbb6e 806 TIGRFAM TIGR00763 lon: endopeptidase La 15 804 4.2E-267 T 11-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 YH65_02535 d972b4a42af8a25485b0435c3d8dbb6e 806 SMART SM00382 358 503 8.4E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain YH65_02535 d972b4a42af8a25485b0435c3d8dbb6e 806 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 708 716 - T 11-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 YH65_02535 d972b4a42af8a25485b0435c3d8dbb6e 806 PIRSF PIRSF001174 1 806 6.5E-288 T 11-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 YH65_02535 d972b4a42af8a25485b0435c3d8dbb6e 806 SMART SM00464 12 203 9.5E-34 T 11-10-2018 IPR003111 Lon, substrate-binding domain YH65_02535 d972b4a42af8a25485b0435c3d8dbb6e 806 Hamap MF_01973 Lon protease [lon]. 12 805 59.214 T 11-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 YH65_02535 d972b4a42af8a25485b0435c3d8dbb6e 806 Gene3D G3DSA:3.30.230.10 604 806 3.8E-71 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YH65_02535 d972b4a42af8a25485b0435c3d8dbb6e 806 SUPERFAMILY SSF54211 606 803 9.48E-45 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold YH65_02535 d972b4a42af8a25485b0435c3d8dbb6e 806 Gene3D G3DSA:1.10.8.60 501 595 3.2E-28 T 11-10-2018 YH65_02535 d972b4a42af8a25485b0435c3d8dbb6e 806 Gene3D G3DSA:1.20.58.1480 122 245 6.1E-27 T 11-10-2018 YH65_02535 d972b4a42af8a25485b0435c3d8dbb6e 806 SUPERFAMILY SSF52540 316 566 7.84E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_02535 d972b4a42af8a25485b0435c3d8dbb6e 806 Gene3D G3DSA:2.30.130.40 6 117 1.5E-14 T 11-10-2018 YH65_02535 d972b4a42af8a25485b0435c3d8dbb6e 806 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 606 622 1.2E-49 T 11-10-2018 YH65_02535 d972b4a42af8a25485b0435c3d8dbb6e 806 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 758 776 1.2E-49 T 11-10-2018 YH65_02535 d972b4a42af8a25485b0435c3d8dbb6e 806 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 705 724 1.2E-49 T 11-10-2018 YH65_02535 d972b4a42af8a25485b0435c3d8dbb6e 806 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 366 385 1.2E-49 T 11-10-2018 YH65_02535 d972b4a42af8a25485b0435c3d8dbb6e 806 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 735 754 1.2E-49 T 11-10-2018 YH65_02535 d972b4a42af8a25485b0435c3d8dbb6e 806 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 581 661 3.4E-26 T 11-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 YH65_02535 d972b4a42af8a25485b0435c3d8dbb6e 806 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 677 805 1.9E-50 T 11-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 YH65_02535 d972b4a42af8a25485b0435c3d8dbb6e 806 Gene3D G3DSA:3.40.50.300 316 500 5.2E-58 T 11-10-2018 YH65_02535 d972b4a42af8a25485b0435c3d8dbb6e 806 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 13 199 5.6E-20 T 11-10-2018 IPR003111 Lon, substrate-binding domain YH65_02535 d972b4a42af8a25485b0435c3d8dbb6e 806 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 362 498 1.3E-20 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 YH65_02740 3150a4fe7e44da1e37c4389e46863ec7 627 SUPERFAMILY SSF100920 378 534 2.75E-63 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 YH65_02740 3150a4fe7e44da1e37c4389e46863ec7 627 Gene3D G3DSA:3.30.30.30 67 117 5.9E-150 T 11-10-2018 YH65_02740 3150a4fe7e44da1e37c4389e46863ec7 627 Pfam PF00012 Hsp70 protein 4 599 3.9E-249 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 YH65_02740 3150a4fe7e44da1e37c4389e46863ec7 627 SUPERFAMILY SSF53067 186 376 1.69E-65 T 11-10-2018 YH65_02740 3150a4fe7e44da1e37c4389e46863ec7 627 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 599 1.1E-287 T 11-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 YH65_02740 3150a4fe7e44da1e37c4389e46863ec7 627 Gene3D G3DSA:3.30.420.40 5 371 5.9E-150 T 11-10-2018 YH65_02740 3150a4fe7e44da1e37c4389e46863ec7 627 SUPERFAMILY SSF53067 1 182 4.07E-60 T 11-10-2018 YH65_02740 3150a4fe7e44da1e37c4389e46863ec7 627 Gene3D G3DSA:3.30.420.40 183 356 5.9E-150 T 11-10-2018 YH65_02740 3150a4fe7e44da1e37c4389e46863ec7 627 SUPERFAMILY SSF100934 528 605 5.49E-7 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 YH65_02740 3150a4fe7e44da1e37c4389e46863ec7 627 Gene3D G3DSA:3.90.640.10 222 309 5.9E-150 T 11-10-2018 YH65_02740 3150a4fe7e44da1e37c4389e46863ec7 627 Gene3D G3DSA:1.20.1270.10 518 603 3.8E-20 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 YH65_02740 3150a4fe7e44da1e37c4389e46863ec7 627 PRINTS PR00301 70kDa heat shock protein signature 31 43 3.0E-75 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 YH65_02740 3150a4fe7e44da1e37c4389e46863ec7 627 PRINTS PR00301 70kDa heat shock protein signature 328 344 3.0E-75 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 YH65_02740 3150a4fe7e44da1e37c4389e46863ec7 627 PRINTS PR00301 70kDa heat shock protein signature 3 16 3.0E-75 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 YH65_02740 3150a4fe7e44da1e37c4389e46863ec7 627 PRINTS PR00301 70kDa heat shock protein signature 463 479 3.0E-75 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 YH65_02740 3150a4fe7e44da1e37c4389e46863ec7 627 PRINTS PR00301 70kDa heat shock protein signature 359 379 3.0E-75 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 YH65_02740 3150a4fe7e44da1e37c4389e46863ec7 627 PRINTS PR00301 70kDa heat shock protein signature 137 157 3.0E-75 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 YH65_02740 3150a4fe7e44da1e37c4389e46863ec7 627 PRINTS PR00301 70kDa heat shock protein signature 382 401 3.0E-75 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 YH65_02740 3150a4fe7e44da1e37c4389e46863ec7 627 PRINTS PR00301 70kDa heat shock protein signature 54 62 3.0E-75 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 YH65_02740 3150a4fe7e44da1e37c4389e46863ec7 627 PRINTS PR00301 70kDa heat shock protein signature 196 206 3.0E-75 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 YH65_02740 3150a4fe7e44da1e37c4389e46863ec7 627 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 331 345 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 YH65_02740 3150a4fe7e44da1e37c4389e46863ec7 627 Gene3D G3DSA:2.60.34.10 377 517 8.3E-65 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 YH65_02740 3150a4fe7e44da1e37c4389e46863ec7 627 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 YH65_02740 3150a4fe7e44da1e37c4389e46863ec7 627 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 621 35.537 T 11-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 YH65_02055 d2b1e394228a29399d31e3619f39fca9 791 Gene3D G3DSA:3.10.20.310 98 165 9.5E-7 T 11-10-2018 YH65_02055 d2b1e394228a29399d31e3619f39fca9 791 Gene3D G3DSA:3.10.20.310 19 87 2.2E-12 T 11-10-2018 YH65_02055 d2b1e394228a29399d31e3619f39fca9 791 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 21 791 4.1E-184 T 11-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 YH65_02055 d2b1e394228a29399d31e3619f39fca9 791 Gene3D G3DSA:2.40.160.50 419 791 1.3E-73 T 11-10-2018 YH65_02055 d2b1e394228a29399d31e3619f39fca9 791 PIRSF PIRSF006076 1 791 4.7E-191 T 11-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 YH65_02055 d2b1e394228a29399d31e3619f39fca9 791 Pfam PF07244 Surface antigen variable number repeat 101 164 3.9E-8 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 YH65_02055 d2b1e394228a29399d31e3619f39fca9 791 Pfam PF07244 Surface antigen variable number repeat 343 414 3.8E-13 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 YH65_02055 d2b1e394228a29399d31e3619f39fca9 791 Pfam PF07244 Surface antigen variable number repeat 261 340 1.4E-7 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 YH65_02055 d2b1e394228a29399d31e3619f39fca9 791 Pfam PF07244 Surface antigen variable number repeat 167 258 3.9E-6 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 YH65_02055 d2b1e394228a29399d31e3619f39fca9 791 Pfam PF07244 Surface antigen variable number repeat 21 86 3.8E-5 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 YH65_02055 d2b1e394228a29399d31e3619f39fca9 791 Gene3D G3DSA:3.10.20.310 262 339 7.8E-13 T 11-10-2018 YH65_02055 d2b1e394228a29399d31e3619f39fca9 791 Gene3D G3DSA:3.10.20.310 167 261 2.5E-15 T 11-10-2018 YH65_02055 d2b1e394228a29399d31e3619f39fca9 791 Gene3D G3DSA:3.10.20.310 344 418 7.2E-22 T 11-10-2018 YH65_02055 d2b1e394228a29399d31e3619f39fca9 791 Pfam PF01103 Surface antigen 442 791 4.2E-51 T 11-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 YH65_02270 c12ef705746ce6c18b61a6f3b3d98de9 568 SUPERFAMILY SSF52540 330 564 3.59E-77 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_02270 c12ef705746ce6c18b61a6f3b3d98de9 568 SUPERFAMILY SSF90123 6 318 1.44E-73 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 YH65_02270 c12ef705746ce6c18b61a6f3b3d98de9 568 ProSitePatterns PS00211 ABC transporters family signature. 468 482 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YH65_02270 c12ef705746ce6c18b61a6f3b3d98de9 568 SMART SM00382 357 548 3.3E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain YH65_02270 c12ef705746ce6c18b61a6f3b3d98de9 568 Pfam PF00664 ABC transporter transmembrane region 20 286 1.1E-49 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 YH65_02270 c12ef705746ce6c18b61a6f3b3d98de9 568 Gene3D G3DSA:1.20.1560.10 1 320 8.0E-80 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 YH65_02270 c12ef705746ce6c18b61a6f3b3d98de9 568 Pfam PF00005 ABC transporter 348 496 1.2E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YH65_02270 c12ef705746ce6c18b61a6f3b3d98de9 568 Gene3D G3DSA:3.40.50.300 321 567 1.4E-79 T 11-10-2018 YH65_06775 dbf0bc30a9982c68bb89d0eca7815e9e 325 SUPERFAMILY SSF52518 3 180 1.18E-60 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold YH65_06775 dbf0bc30a9982c68bb89d0eca7815e9e 325 Gene3D G3DSA:3.40.50.970 1 187 2.5E-69 T 11-10-2018 YH65_06775 dbf0bc30a9982c68bb89d0eca7815e9e 325 Pfam PF02780 Transketolase, C-terminal domain 190 312 6.8E-31 T 11-10-2018 IPR033248 Transketolase, C-terminal domain YH65_06775 dbf0bc30a9982c68bb89d0eca7815e9e 325 Pfam PF02779 Transketolase, pyrimidine binding domain 3 176 1.2E-41 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain YH65_06775 dbf0bc30a9982c68bb89d0eca7815e9e 325 SUPERFAMILY SSF52922 186 319 6.54E-33 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 YH65_06775 dbf0bc30a9982c68bb89d0eca7815e9e 325 Gene3D G3DSA:3.40.50.920 188 320 2.9E-37 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 YH65_06775 dbf0bc30a9982c68bb89d0eca7815e9e 325 SMART SM00861 1 176 1.6E-57 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain YH65_05060 e38970b1ea151e6c0281d16da65d6c90 321 ProSitePatterns PS00761 Signal peptidases I signature 3. 221 234 - T 11-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 YH65_05060 e38970b1ea151e6c0281d16da65d6c90 321 Gene3D G3DSA:2.170.230.10 116 215 2.8E-43 T 11-10-2018 YH65_05060 e38970b1ea151e6c0281d16da65d6c90 321 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 28 44 3.3E-16 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 YH65_05060 e38970b1ea151e6c0281d16da65d6c90 321 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 105 117 3.3E-16 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 YH65_05060 e38970b1ea151e6c0281d16da65d6c90 321 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 216 235 3.3E-16 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 YH65_05060 e38970b1ea151e6c0281d16da65d6c90 321 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 17 256 2.1E-35 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 YH65_05060 e38970b1ea151e6c0281d16da65d6c90 321 Gene3D G3DSA:2.10.109.10 28 255 2.8E-43 T 11-10-2018 YH65_05060 e38970b1ea151e6c0281d16da65d6c90 321 Pfam PF00717 Peptidase S24-like 35 120 1.3E-13 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C YH65_05060 e38970b1ea151e6c0281d16da65d6c90 321 SUPERFAMILY SSF51306 27 260 2.72E-50 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily YH65_04180 19760ba9f470a46d7462436b304ca30f 307 PRINTS PR01270 Histone deacetylase superfamily signature 118 141 1.2E-16 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 YH65_04180 19760ba9f470a46d7462436b304ca30f 307 PRINTS PR01270 Histone deacetylase superfamily signature 235 245 1.2E-16 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 YH65_04180 19760ba9f470a46d7462436b304ca30f 307 PRINTS PR01270 Histone deacetylase superfamily signature 151 166 1.2E-16 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 YH65_04180 19760ba9f470a46d7462436b304ca30f 307 Pfam PF00850 Histone deacetylase domain 20 298 3.6E-76 T 11-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 YH65_04180 19760ba9f470a46d7462436b304ca30f 307 SUPERFAMILY SSF52768 2 303 4.22E-95 T 11-10-2018 IPR023696 Ureohydrolase domain superfamily YH65_04180 19760ba9f470a46d7462436b304ca30f 307 Gene3D G3DSA:3.40.800.20 2 307 1.0E-95 T 11-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 YH65_08565 d05e4ef2c7c546ec11d3174d27783629 468 Gene3D G3DSA:3.40.50.300 3 197 2.7E-23 T 11-10-2018 YH65_08565 d05e4ef2c7c546ec11d3174d27783629 468 Pfam PF01926 50S ribosome-binding GTPase 8 92 3.8E-12 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 YH65_08565 d05e4ef2c7c546ec11d3174d27783629 468 SUPERFAMILY SSF52540 5 172 1.53E-17 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_08565 d05e4ef2c7c546ec11d3174d27783629 468 Pfam PF11981 Domain of unknown function (DUF3482) 163 443 2.3E-66 T 11-10-2018 IPR021871 Protein of unknown function DUF3482 YH65_08395 1caca83e705b2aa7dbe3f81e661df07a 777 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 771 31.904 T 11-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 YH65_08395 1caca83e705b2aa7dbe3f81e661df07a 777 Gene3D G3DSA:3.30.930.10 481 676 5.0E-40 T 11-10-2018 YH65_08395 1caca83e705b2aa7dbe3f81e661df07a 777 SUPERFAMILY SSF50249 44 195 3.43E-42 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold YH65_08395 1caca83e705b2aa7dbe3f81e661df07a 777 Pfam PF03484 tRNA synthetase B5 domain 397 460 7.6E-14 T 11-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 YH65_08395 1caca83e705b2aa7dbe3f81e661df07a 777 Gene3D G3DSA:3.50.40.10 221 379 1.9E-5 T 11-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 YH65_08395 1caca83e705b2aa7dbe3f81e661df07a 777 Gene3D G3DSA:3.30.70.380 686 777 1.8E-17 T 11-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 YH65_08395 1caca83e705b2aa7dbe3f81e661df07a 777 SUPERFAMILY SSF56037 254 385 7.32E-8 T 11-10-2018 YH65_08395 1caca83e705b2aa7dbe3f81e661df07a 777 SUPERFAMILY SSF54991 681 777 2.75E-23 T 11-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 YH65_08395 1caca83e705b2aa7dbe3f81e661df07a 777 Pfam PF01588 Putative tRNA binding domain 45 138 5.8E-24 T 11-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 YH65_08395 1caca83e705b2aa7dbe3f81e661df07a 777 SMART SM00896 685 777 2.4E-29 T 11-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 YH65_08395 1caca83e705b2aa7dbe3f81e661df07a 777 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 777 1.2E-185 T 11-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 YH65_08395 1caca83e705b2aa7dbe3f81e661df07a 777 SUPERFAMILY SSF46955 393 465 1.1E-15 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily YH65_08395 1caca83e705b2aa7dbe3f81e661df07a 777 Gene3D G3DSA:3.30.56.10 391 464 3.6E-16 T 11-10-2018 YH65_08395 1caca83e705b2aa7dbe3f81e661df07a 777 Pfam PF03147 Ferredoxin-fold anticodon binding domain 685 777 2.0E-22 T 11-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 YH65_08395 1caca83e705b2aa7dbe3f81e661df07a 777 Gene3D G3DSA:2.40.50.140 40 156 5.1E-61 T 11-10-2018 YH65_08395 1caca83e705b2aa7dbe3f81e661df07a 777 SUPERFAMILY SSF55681 457 675 1.39E-31 T 11-10-2018 YH65_08395 1caca83e705b2aa7dbe3f81e661df07a 777 SMART SM00873 218 376 0.0028 T 11-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 YH65_08395 1caca83e705b2aa7dbe3f81e661df07a 777 Gene3D G3DSA:3.30.56.10 6 183 5.1E-61 T 11-10-2018 YH65_08395 1caca83e705b2aa7dbe3f81e661df07a 777 SMART SM00874 392 461 4.8E-18 T 11-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 YH65_03550 a03ea7173036bd1e6ccd1698fefedefa 147 SUPERFAMILY SSF55653 57 145 1.27E-17 T 11-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily YH65_03550 a03ea7173036bd1e6ccd1698fefedefa 147 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 147 20.75 T 11-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 YH65_03550 a03ea7173036bd1e6ccd1698fefedefa 147 SUPERFAMILY SSF55658 1 57 9.24E-17 T 11-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal YH65_03550 a03ea7173036bd1e6ccd1698fefedefa 147 Gene3D G3DSA:3.10.430.100 56 146 1.5E-16 T 11-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily YH65_03550 a03ea7173036bd1e6ccd1698fefedefa 147 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 145 4.0E-34 T 11-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 YH65_03550 a03ea7173036bd1e6ccd1698fefedefa 147 Gene3D G3DSA:3.40.5.10 1 52 3.5E-22 T 11-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_03550 a03ea7173036bd1e6ccd1698fefedefa 147 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 45 4.9E-20 T 11-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_03550 a03ea7173036bd1e6ccd1698fefedefa 147 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 11-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_03550 a03ea7173036bd1e6ccd1698fefedefa 147 Pfam PF03948 Ribosomal protein L9, C-terminal domain 66 145 5.1E-17 T 11-10-2018 IPR020069 Ribosomal protein L9, C-terminal YH65_01880 8ea865084ca54928fc394eafb9863120 405 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 2 398 41.635 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 YH65_01880 8ea865084ca54928fc394eafb9863120 405 SUPERFAMILY SSF50621 241 397 5.02E-56 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 YH65_01880 8ea865084ca54928fc394eafb9863120 405 Gene3D G3DSA:3.20.20.10 21 262 1.6E-143 T 11-10-2018 IPR029066 PLP-binding barrel YH65_01880 8ea865084ca54928fc394eafb9863120 405 SUPERFAMILY SSF51419 13 269 1.37E-77 T 11-10-2018 IPR029066 PLP-binding barrel YH65_01880 8ea865084ca54928fc394eafb9863120 405 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 44 62 - T 11-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site YH65_01880 8ea865084ca54928fc394eafb9863120 405 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 23 267 2.3E-59 T 11-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 YH65_01880 8ea865084ca54928fc394eafb9863120 405 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 3 397 1.0E-154 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 YH65_01880 8ea865084ca54928fc394eafb9863120 405 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 257 276 6.8E-25 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 YH65_01880 8ea865084ca54928fc394eafb9863120 405 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 44 62 6.8E-25 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 YH65_01880 8ea865084ca54928fc394eafb9863120 405 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 177 190 6.8E-25 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 YH65_01880 8ea865084ca54928fc394eafb9863120 405 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 355 368 6.8E-25 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 YH65_01880 8ea865084ca54928fc394eafb9863120 405 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 64 76 6.8E-25 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 YH65_01880 8ea865084ca54928fc394eafb9863120 405 Gene3D G3DSA:2.40.37.10 3 394 1.6E-143 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 YH65_01880 8ea865084ca54928fc394eafb9863120 405 PRINTS PR01181 Diaminopimelate decarboxylase signature 285 303 3.9E-30 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 YH65_01880 8ea865084ca54928fc394eafb9863120 405 PRINTS PR01181 Diaminopimelate decarboxylase signature 365 387 3.9E-30 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 YH65_01880 8ea865084ca54928fc394eafb9863120 405 PRINTS PR01181 Diaminopimelate decarboxylase signature 151 160 3.9E-30 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 YH65_01880 8ea865084ca54928fc394eafb9863120 405 PRINTS PR01181 Diaminopimelate decarboxylase signature 62 79 3.9E-30 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 YH65_01880 8ea865084ca54928fc394eafb9863120 405 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 213 228 - T 11-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site YH65_01880 8ea865084ca54928fc394eafb9863120 405 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 268 355 1.2E-25 T 11-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 YH65_09345 22ebc1f100ada1e890fa9c75f80d7690 94 Gene3D G3DSA:3.30.1200.10 1 94 1.1E-26 T 11-10-2018 IPR036591 YggU-like superfamily YH65_09345 22ebc1f100ada1e890fa9c75f80d7690 94 SMART SM01152 6 83 7.0E-29 T 11-10-2018 IPR003746 Protein of unknown function DUF167 YH65_09345 22ebc1f100ada1e890fa9c75f80d7690 94 Hamap MF_00634 UPF0235 protein YggU [yggU]. 6 93 16.987 T 11-10-2018 IPR003746 Protein of unknown function DUF167 YH65_09345 22ebc1f100ada1e890fa9c75f80d7690 94 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 10 80 2.1E-23 T 11-10-2018 IPR003746 Protein of unknown function DUF167 YH65_09345 22ebc1f100ada1e890fa9c75f80d7690 94 SUPERFAMILY SSF69786 2 87 1.96E-23 T 11-10-2018 IPR036591 YggU-like superfamily YH65_09345 22ebc1f100ada1e890fa9c75f80d7690 94 TIGRFAM TIGR00251 TIGR00251: TIGR00251 family protein 7 81 2.6E-17 T 11-10-2018 IPR005228 Conserved hypothetical protein CHP00251 YH65_06110 e2a58f2f88a89574120808600d67104c 321 Pfam PF00571 CBS domain 236 285 7.9E-5 T 11-10-2018 IPR000644 CBS domain YH65_06110 e2a58f2f88a89574120808600d67104c 321 Gene3D G3DSA:3.10.580.10 144 296 1.2E-35 T 11-10-2018 YH65_06110 e2a58f2f88a89574120808600d67104c 321 Pfam PF01595 Domain of unknown function DUF21 7 150 1.4E-27 T 11-10-2018 IPR002550 CNNM, transmembrane domain YH65_06110 e2a58f2f88a89574120808600d67104c 321 SUPERFAMILY SSF54631 153 286 5.93E-20 T 11-10-2018 YH65_06950 321dea58621bec43ce084922a35a515d 233 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 7 168 4.8E-71 T 11-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 YH65_06950 321dea58621bec43ce084922a35a515d 233 SUPERFAMILY SSF51161 3 172 2.36E-52 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily YH65_06950 321dea58621bec43ce084922a35a515d 233 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 128 156 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 YH65_06950 321dea58621bec43ce084922a35a515d 233 PIRSF PIRSF000441 1 225 6.7E-78 T 11-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 YH65_06950 321dea58621bec43ce084922a35a515d 233 Gene3D G3DSA:1.10.3130.10 1 68 1.4E-19 T 11-10-2018 YH65_06950 321dea58621bec43ce084922a35a515d 233 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 74 110 2.3E-4 T 11-10-2018 IPR001451 Hexapeptide repeat YH65_06950 321dea58621bec43ce084922a35a515d 233 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 120 152 1.6E-8 T 11-10-2018 IPR001451 Hexapeptide repeat YH65_06950 321dea58621bec43ce084922a35a515d 233 Gene3D G3DSA:2.160.10.10 69 189 2.0E-37 T 11-10-2018 YH65_08905 af4599e4e5667fb2b3a2b8704f724e78 276 SUPERFAMILY SSF82114 145 276 6.32E-27 T 11-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 YH65_08905 af4599e4e5667fb2b3a2b8704f724e78 276 SMART SM00904 154 276 3.1E-33 T 11-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 YH65_08905 af4599e4e5667fb2b3a2b8704f724e78 276 SUPERFAMILY SSF52374 18 157 1.41E-13 T 11-10-2018 YH65_08905 af4599e4e5667fb2b3a2b8704f724e78 276 Pfam PF01687 Riboflavin kinase 155 275 1.2E-21 T 11-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 YH65_08905 af4599e4e5667fb2b3a2b8704f724e78 276 Gene3D G3DSA:3.40.50.620 54 158 1.4E-20 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YH65_08905 af4599e4e5667fb2b3a2b8704f724e78 276 Gene3D G3DSA:2.40.30.30 159 274 2.6E-21 T 11-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 YH65_08905 af4599e4e5667fb2b3a2b8704f724e78 276 PIRSF PIRSF004491 54 276 2.0E-52 T 11-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 YH65_08905 af4599e4e5667fb2b3a2b8704f724e78 276 PIRSF PIRSF004491 1 45 3.2E-5 T 11-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 YH65_08905 af4599e4e5667fb2b3a2b8704f724e78 276 Pfam PF06574 FAD synthetase 60 136 4.1E-9 T 11-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 YH65_01425 8240273ff74137b4712499c2e00eb921 1016 Pfam PF02585 GlcNAc-PI de-N-acetylase 21 136 1.0E-25 T 11-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 YH65_01425 8240273ff74137b4712499c2e00eb921 1016 SUPERFAMILY SSF102588 21 214 1.11E-44 T 11-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 YH65_01425 8240273ff74137b4712499c2e00eb921 1016 Pfam PF13527 Acetyltransferase (GNAT) domain 713 786 1.3E-5 T 11-10-2018 YH65_01425 8240273ff74137b4712499c2e00eb921 1016 Pfam PF00535 Glycosyl transferase family 2 245 371 4.6E-17 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 YH65_01425 8240273ff74137b4712499c2e00eb921 1016 SUPERFAMILY SSF53448 242 436 1.41E-31 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YH65_01425 8240273ff74137b4712499c2e00eb921 1016 Gene3D G3DSA:3.90.550.10 242 478 1.0E-28 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YH65_01425 8240273ff74137b4712499c2e00eb921 1016 Gene3D G3DSA:3.40.50.10320 11 224 1.4E-48 T 11-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 YH65_01750 f503218e2d97e2aab4ddb97c538a8ed9 307 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 129 140 4.5E-23 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YH65_01750 f503218e2d97e2aab4ddb97c538a8ed9 307 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 47 66 4.5E-23 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YH65_01750 f503218e2d97e2aab4ddb97c538a8ed9 307 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 256 265 4.5E-23 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YH65_01750 f503218e2d97e2aab4ddb97c538a8ed9 307 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 268 291 4.5E-23 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YH65_01750 f503218e2d97e2aab4ddb97c538a8ed9 307 Gene3D G3DSA:3.40.50.1370 2 131 1.4E-115 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 YH65_01750 f503218e2d97e2aab4ddb97c538a8ed9 307 Gene3D G3DSA:3.40.50.1370 132 299 1.4E-115 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 YH65_01750 f503218e2d97e2aab4ddb97c538a8ed9 307 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 2 302 1.6E-120 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 YH65_01750 f503218e2d97e2aab4ddb97c538a8ed9 307 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 1 304 78.22 T 11-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 YH65_01750 f503218e2d97e2aab4ddb97c538a8ed9 307 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 47 54 - T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YH65_01750 f503218e2d97e2aab4ddb97c538a8ed9 307 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 151 301 2.1E-55 T 11-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 YH65_01750 f503218e2d97e2aab4ddb97c538a8ed9 307 PRINTS PR00102 Ornithine carbamoyltransferase signature 78 91 1.4E-29 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 YH65_01750 f503218e2d97e2aab4ddb97c538a8ed9 307 PRINTS PR00102 Ornithine carbamoyltransferase signature 118 132 1.4E-29 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 YH65_01750 f503218e2d97e2aab4ddb97c538a8ed9 307 PRINTS PR00102 Ornithine carbamoyltransferase signature 45 59 1.4E-29 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 YH65_01750 f503218e2d97e2aab4ddb97c538a8ed9 307 PRINTS PR00102 Ornithine carbamoyltransferase signature 220 230 1.4E-29 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 YH65_01750 f503218e2d97e2aab4ddb97c538a8ed9 307 PRINTS PR00102 Ornithine carbamoyltransferase signature 282 293 1.4E-29 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 YH65_01750 f503218e2d97e2aab4ddb97c538a8ed9 307 SUPERFAMILY SSF53671 1 303 2.1E-100 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 YH65_01750 f503218e2d97e2aab4ddb97c538a8ed9 307 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 2 142 6.1E-49 T 11-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 YH65_02325 366a667224ee54520181df8c4b70e814 342 SUPERFAMILY SSF52540 2 170 3.92E-9 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_02325 366a667224ee54520181df8c4b70e814 342 Gene3D G3DSA:3.40.50.300 2 196 9.8E-8 T 11-10-2018 YH65_07880 d4bc6d6a3712bae530d014e25a8dfabd 350 SUPERFAMILY SSF50156 83 187 5.26E-19 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 YH65_07880 d4bc6d6a3712bae530d014e25a8dfabd 350 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 125 176 1.1E-7 T 11-10-2018 IPR001478 PDZ domain GO:0005515 YH65_07880 d4bc6d6a3712bae530d014e25a8dfabd 350 Pfam PF02163 Peptidase family M50 6 333 7.7E-78 T 11-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 YH65_07880 d4bc6d6a3712bae530d014e25a8dfabd 350 SMART SM00228 110 179 7.3E-7 T 11-10-2018 IPR001478 PDZ domain GO:0005515 YH65_07880 d4bc6d6a3712bae530d014e25a8dfabd 350 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 2 180 8.8E-55 T 11-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 YH65_07880 d4bc6d6a3712bae530d014e25a8dfabd 350 Gene3D G3DSA:2.30.42.10 121 211 4.1E-16 T 11-10-2018 YH65_00340 3986b48abf6dacd4e79128c28d2a7dc9 93 Pfam PF00639 PPIC-type PPIASE domain 17 90 4.2E-22 T 11-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 YH65_00340 3986b48abf6dacd4e79128c28d2a7dc9 93 SUPERFAMILY SSF54534 5 91 7.2E-29 T 11-10-2018 YH65_00340 3986b48abf6dacd4e79128c28d2a7dc9 93 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 31 51 - T 11-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 YH65_00340 3986b48abf6dacd4e79128c28d2a7dc9 93 Gene3D G3DSA:3.10.50.40 1 93 2.6E-32 T 11-10-2018 YH65_03995 8ce362fc3fd48ce633a4029cc8218c92 361 Gene3D G3DSA:1.20.120.1380 138 346 2.2E-57 T 11-10-2018 YH65_03995 8ce362fc3fd48ce633a4029cc8218c92 361 Gene3D G3DSA:3.40.50.300 156 344 2.2E-57 T 11-10-2018 YH65_03995 8ce362fc3fd48ce633a4029cc8218c92 361 SUPERFAMILY SSF52540 159 355 3.3E-33 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_03995 8ce362fc3fd48ce633a4029cc8218c92 361 Pfam PF00448 SRP54-type protein, GTPase domain 162 355 9.7E-39 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 YH65_03995 8ce362fc3fd48ce633a4029cc8218c92 361 SMART SM00382 160 319 2.8E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain YH65_03995 8ce362fc3fd48ce633a4029cc8218c92 361 SMART SM00962 161 356 6.0E-46 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 YH65_06760 897f080385d789717483b0c3ad6e3f56 626 Gene3D G3DSA:3.20.20.450 364 617 9.1E-84 T 11-10-2018 IPR035919 EAL domain superfamily YH65_06760 897f080385d789717483b0c3ad6e3f56 626 Pfam PF00990 Diguanylate cyclase, GGDEF domain 186 346 2.5E-44 T 11-10-2018 IPR000160 GGDEF domain YH65_06760 897f080385d789717483b0c3ad6e3f56 626 SUPERFAMILY SSF55073 191 353 3.77E-43 T 11-10-2018 IPR029787 Nucleotide cyclase YH65_06760 897f080385d789717483b0c3ad6e3f56 626 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 185 350 1.0E-40 T 11-10-2018 IPR000160 GGDEF domain YH65_06760 897f080385d789717483b0c3ad6e3f56 626 Gene3D G3DSA:3.30.70.270 181 363 1.9E-52 T 11-10-2018 YH65_06760 897f080385d789717483b0c3ad6e3f56 626 SUPERFAMILY SSF141868 366 616 1.1E-75 T 11-10-2018 IPR035919 EAL domain superfamily YH65_06760 897f080385d789717483b0c3ad6e3f56 626 SMART SM00267 174 351 1.2E-50 T 11-10-2018 IPR000160 GGDEF domain YH65_06760 897f080385d789717483b0c3ad6e3f56 626 SMART SM00052 361 608 5.1E-92 T 11-10-2018 IPR001633 EAL domain YH65_06760 897f080385d789717483b0c3ad6e3f56 626 Pfam PF00563 EAL domain 369 602 6.6E-64 T 11-10-2018 IPR001633 EAL domain YH65_01170 586878ba8bbdd80ed5615ea094c5d0ff 402 SUPERFAMILY SSF52540 3 221 3.33E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_01170 586878ba8bbdd80ed5615ea094c5d0ff 402 Pfam PF00009 Elongation factor Tu GTP binding domain 10 209 4.9E-58 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YH65_01170 586878ba8bbdd80ed5615ea094c5d0ff 402 Gene3D G3DSA:2.40.30.10 214 342 6.7E-52 T 11-10-2018 YH65_01170 586878ba8bbdd80ed5615ea094c5d0ff 402 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 402 59.353 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 YH65_01170 586878ba8bbdd80ed5615ea094c5d0ff 402 SUPERFAMILY SSF50447 213 309 3.53E-29 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily YH65_01170 586878ba8bbdd80ed5615ea094c5d0ff 402 PRINTS PR00315 GTP-binding elongation factor signature 78 88 3.3E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YH65_01170 586878ba8bbdd80ed5615ea094c5d0ff 402 PRINTS PR00315 GTP-binding elongation factor signature 14 27 3.3E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YH65_01170 586878ba8bbdd80ed5615ea094c5d0ff 402 PRINTS PR00315 GTP-binding elongation factor signature 131 140 3.3E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YH65_01170 586878ba8bbdd80ed5615ea094c5d0ff 402 PRINTS PR00315 GTP-binding elongation factor signature 94 105 3.3E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YH65_01170 586878ba8bbdd80ed5615ea094c5d0ff 402 PRINTS PR00315 GTP-binding elongation factor signature 58 66 3.3E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YH65_01170 586878ba8bbdd80ed5615ea094c5d0ff 402 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 401 3.1E-224 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 YH65_01170 586878ba8bbdd80ed5615ea094c5d0ff 402 SUPERFAMILY SSF50465 310 402 1.22E-35 T 11-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal YH65_01170 586878ba8bbdd80ed5615ea094c5d0ff 402 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site YH65_01170 586878ba8bbdd80ed5615ea094c5d0ff 402 Gene3D G3DSA:3.40.50.300 1 211 2.4E-67 T 11-10-2018 YH65_01170 586878ba8bbdd80ed5615ea094c5d0ff 402 Gene3D G3DSA:2.40.30.10 346 401 3.2E-28 T 11-10-2018 YH65_01170 586878ba8bbdd80ed5615ea094c5d0ff 402 Pfam PF03143 Elongation factor Tu C-terminal domain 306 400 1.0E-33 T 11-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal YH65_01170 586878ba8bbdd80ed5615ea094c5d0ff 402 Pfam PF03144 Elongation factor Tu domain 2 233 302 1.1E-17 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 YH65_01170 586878ba8bbdd80ed5615ea094c5d0ff 402 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 155 8.7E-15 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 YH65_01890 84934832762baac96d7c62407400ecac 364 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 6 361 1.6E-97 T 11-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 YH65_01890 84934832762baac96d7c62407400ecac 364 Gene3D G3DSA:3.90.1150.10 30 352 9.0E-92 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 YH65_01890 84934832762baac96d7c62407400ecac 364 Gene3D G3DSA:3.40.640.10 45 270 9.0E-92 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 YH65_01890 84934832762baac96d7c62407400ecac 364 SUPERFAMILY SSF53383 3 363 3.56E-72 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase YH65_01890 84934832762baac96d7c62407400ecac 364 Pfam PF00155 Aminotransferase class I and II 31 356 1.5E-47 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YH65_01890 84934832762baac96d7c62407400ecac 364 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 2 363 53.623 T 11-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 YH65_10310 b01095a658cbf237647717a6c4fbfb47 465 Pfam PF13746 4Fe-4S dicluster domain 188 303 4.3E-49 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YH65_10310 b01095a658cbf237647717a6c4fbfb47 465 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 251 262 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YH65_10310 b01095a658cbf237647717a6c4fbfb47 465 SUPERFAMILY SSF54862 72 330 1.53E-20 T 11-10-2018 YH65_10310 b01095a658cbf237647717a6c4fbfb47 465 Pfam PF12801 4Fe-4S binding domain 60 104 7.5E-15 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YH65_10310 b01095a658cbf237647717a6c4fbfb47 465 Gene3D G3DSA:2.60.40.10 340 457 1.6E-5 T 11-10-2018 IPR013783 Immunoglobulin-like fold YH65_10310 b01095a658cbf237647717a6c4fbfb47 465 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 335 458 4.7E-24 T 11-10-2018 IPR032879 FixG, C-terminal immunoglobulin-like domain YH65_10310 b01095a658cbf237647717a6c4fbfb47 465 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 7 458 3.4E-151 T 11-10-2018 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021|GO:0055114 YH65_02245 3e1798adbb5be9b136ce731a0f204ba1 363 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 80 305 8.7E-19 T 11-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 YH65_02245 3e1798adbb5be9b136ce731a0f204ba1 363 SUPERFAMILY SSF53756 6 360 8.16E-57 T 11-10-2018 YH65_02245 3e1798adbb5be9b136ce731a0f204ba1 363 Gene3D G3DSA:3.40.50.2000 166 362 1.1E-21 T 11-10-2018 YH65_02245 3e1798adbb5be9b136ce731a0f204ba1 363 Gene3D G3DSA:3.40.50.2000 1 162 4.4E-24 T 11-10-2018 YH65_00105 665a91aa06e4c21ee8d7fece0ddb0b5d 404 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 162 190 - T 11-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 YH65_00105 665a91aa06e4c21ee8d7fece0ddb0b5d 404 Pfam PF00482 Type II secretion system (T2SS), protein F 272 395 1.2E-21 T 11-10-2018 IPR018076 Type II secretion system F domain YH65_00105 665a91aa06e4c21ee8d7fece0ddb0b5d 404 Pfam PF00482 Type II secretion system (T2SS), protein F 65 190 7.6E-20 T 11-10-2018 IPR018076 Type II secretion system F domain YH65_00105 665a91aa06e4c21ee8d7fece0ddb0b5d 404 PRINTS PR00812 Bacterial general secretion pathway protein F signature 384 403 1.4E-18 T 11-10-2018 IPR003004 GspF/PilC family YH65_00105 665a91aa06e4c21ee8d7fece0ddb0b5d 404 PRINTS PR00812 Bacterial general secretion pathway protein F signature 162 190 1.4E-18 T 11-10-2018 IPR003004 GspF/PilC family YH65_00105 665a91aa06e4c21ee8d7fece0ddb0b5d 404 PRINTS PR00812 Bacterial general secretion pathway protein F signature 368 382 1.4E-18 T 11-10-2018 IPR003004 GspF/PilC family YH65_00105 665a91aa06e4c21ee8d7fece0ddb0b5d 404 PRINTS PR00812 Bacterial general secretion pathway protein F signature 61 73 1.4E-18 T 11-10-2018 IPR003004 GspF/PilC family YH65_00105 665a91aa06e4c21ee8d7fece0ddb0b5d 404 Gene3D G3DSA:1.20.81.30 254 368 2.1E-18 T 11-10-2018 YH65_00105 665a91aa06e4c21ee8d7fece0ddb0b5d 404 Gene3D G3DSA:1.20.81.30 52 171 4.2E-19 T 11-10-2018 YH65_03930 56bea109932805ba9b03c57a5c9c138c 137 Gene3D G3DSA:1.10.10.10 2 137 9.7E-33 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YH65_03930 56bea109932805ba9b03c57a5c9c138c 137 Pfam PF02082 Transcriptional regulator 4 84 1.6E-23 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type YH65_03930 56bea109932805ba9b03c57a5c9c138c 137 SUPERFAMILY SSF46785 4 115 1.95E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YH65_03930 56bea109932805ba9b03c57a5c9c138c 137 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 4 112 8.2E-26 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type YH65_10050 e8d720b265845b228d9ed5912b962318 169 Gene3D G3DSA:3.30.1360.80 1 169 4.7E-69 T 11-10-2018 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 YH65_10050 e8d720b265845b228d9ed5912b962318 169 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 3.0E-48 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 YH65_10050 e8d720b265845b228d9ed5912b962318 169 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 3.0E-48 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 YH65_10050 e8d720b265845b228d9ed5912b962318 169 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 3.0E-48 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 YH65_10050 e8d720b265845b228d9ed5912b962318 169 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 3.0E-48 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 YH65_10050 e8d720b265845b228d9ed5912b962318 169 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 121 140 3.0E-48 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 YH65_10050 e8d720b265845b228d9ed5912b962318 169 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 9 153 5.0E-63 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 YH65_10050 e8d720b265845b228d9ed5912b962318 169 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 159 35.209 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 YH65_10050 e8d720b265845b228d9ed5912b962318 169 PIRSF PIRSF006160 1 162 2.1E-66 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 YH65_10050 e8d720b265845b228d9ed5912b962318 169 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 154 4.4E-62 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 YH65_10050 e8d720b265845b228d9ed5912b962318 169 SUPERFAMILY SSF63411 4 161 2.47E-65 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 YH65_08245 3f896b8c15406d0b05ed2d818b71e5db 285 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 51 197 3.2E-34 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 YH65_08245 3f896b8c15406d0b05ed2d818b71e5db 285 SUPERFAMILY SSF52518 14 224 2.32E-64 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold YH65_08245 3f896b8c15406d0b05ed2d818b71e5db 285 Gene3D G3DSA:3.40.50.970 28 219 2.6E-27 T 11-10-2018 YH65_06385 104f60dbc91c8eb7cf8cbc164c183da4 131 SUPERFAMILY SSF52821 20 113 1.57E-18 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily YH65_06385 104f60dbc91c8eb7cf8cbc164c183da4 131 Gene3D G3DSA:3.40.250.10 23 114 2.1E-14 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily YH65_06385 104f60dbc91c8eb7cf8cbc164c183da4 131 SMART SM00450 25 119 6.1E-5 T 11-10-2018 IPR001763 Rhodanese-like domain YH65_06385 104f60dbc91c8eb7cf8cbc164c183da4 131 Pfam PF00581 Rhodanese-like domain 29 110 4.0E-6 T 11-10-2018 IPR001763 Rhodanese-like domain YH65_09865 ebf86e8fd862b38a0bafbd03c4a9351a 105 Pfam PF00085 Thioredoxin 5 102 1.1E-33 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 YH65_09865 ebf86e8fd862b38a0bafbd03c4a9351a 105 PRINTS PR00421 Thioredoxin family signature 21 29 7.3E-9 T 11-10-2018 YH65_09865 ebf86e8fd862b38a0bafbd03c4a9351a 105 PRINTS PR00421 Thioredoxin family signature 29 38 7.3E-9 T 11-10-2018 YH65_09865 ebf86e8fd862b38a0bafbd03c4a9351a 105 PRINTS PR00421 Thioredoxin family signature 69 80 7.3E-9 T 11-10-2018 YH65_09865 ebf86e8fd862b38a0bafbd03c4a9351a 105 SUPERFAMILY SSF52833 3 105 4.04E-39 T 11-10-2018 IPR036249 Thioredoxin-like superfamily YH65_09865 ebf86e8fd862b38a0bafbd03c4a9351a 105 TIGRFAM TIGR01068 thioredoxin: thioredoxin 8 103 2.9E-38 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 YH65_09865 ebf86e8fd862b38a0bafbd03c4a9351a 105 ProSitePatterns PS00194 Thioredoxin family active site. 22 40 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 YH65_09865 ebf86e8fd862b38a0bafbd03c4a9351a 105 PIRSF PIRSF000077 1 105 7.6E-40 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 YH65_09865 ebf86e8fd862b38a0bafbd03c4a9351a 105 Gene3D G3DSA:3.40.30.10 1 105 1.5E-37 T 11-10-2018 YH65_07240 143e90289be5741517e4bc1565ca09f3 511 Pfam PF02254 TrkA-N domain 290 405 5.2E-23 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 YH65_07240 143e90289be5741517e4bc1565ca09f3 511 PRINTS PR00169 Potassium channel signature 211 233 1.5E-17 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 YH65_07240 143e90289be5741517e4bc1565ca09f3 511 PRINTS PR00169 Potassium channel signature 240 266 1.5E-17 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 YH65_07240 143e90289be5741517e4bc1565ca09f3 511 PRINTS PR00169 Potassium channel signature 181 204 1.5E-17 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 YH65_07240 143e90289be5741517e4bc1565ca09f3 511 PRINTS PR00169 Potassium channel signature 31 59 1.5E-17 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 YH65_07240 143e90289be5741517e4bc1565ca09f3 511 PRINTS PR00169 Potassium channel signature 152 178 1.5E-17 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 YH65_07240 143e90289be5741517e4bc1565ca09f3 511 Gene3D G3DSA:3.30.70.1450 435 507 1.8E-12 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 YH65_07240 143e90289be5741517e4bc1565ca09f3 511 SUPERFAMILY SSF81324 35 269 1.07E-40 T 11-10-2018 YH65_07240 143e90289be5741517e4bc1565ca09f3 511 SUPERFAMILY SSF51735 289 424 7.19E-23 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily YH65_07240 143e90289be5741517e4bc1565ca09f3 511 Pfam PF02080 TrkA-C domain 440 502 1.6E-8 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YH65_07240 143e90289be5741517e4bc1565ca09f3 511 Pfam PF00520 Ion transport protein 38 268 4.1E-21 T 11-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 YH65_07240 143e90289be5741517e4bc1565ca09f3 511 Gene3D G3DSA:1.10.287.70 36 270 2.1E-40 T 11-10-2018 YH65_07240 143e90289be5741517e4bc1565ca09f3 511 SUPERFAMILY SSF116726 437 507 1.83E-11 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 YH65_07240 143e90289be5741517e4bc1565ca09f3 511 Gene3D G3DSA:3.40.50.720 282 420 5.6E-27 T 11-10-2018 YH65_08110 ffe1b8a4d7d67e3ec32eaebe86d002f8 398 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 221 258 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YH65_08110 ffe1b8a4d7d67e3ec32eaebe86d002f8 398 Gene3D G3DSA:3.90.1150.10 26 388 2.4E-116 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 YH65_08110 ffe1b8a4d7d67e3ec32eaebe86d002f8 398 PIRSF PIRSF000521 2 166 3.8E-7 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YH65_08110 ffe1b8a4d7d67e3ec32eaebe86d002f8 398 PIRSF PIRSF000521 172 398 3.6E-26 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YH65_08110 ffe1b8a4d7d67e3ec32eaebe86d002f8 398 Gene3D G3DSA:3.40.640.10 58 301 2.4E-116 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 YH65_08110 ffe1b8a4d7d67e3ec32eaebe86d002f8 398 Pfam PF00202 Aminotransferase class-III 24 395 1.2E-91 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YH65_08110 ffe1b8a4d7d67e3ec32eaebe86d002f8 398 SUPERFAMILY SSF53383 13 397 6.19E-99 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase YH65_03600 4a80f7746fc76c4fb385df7952e915de 579 Gene3D G3DSA:3.30.450.90 167 304 1.5E-43 T 11-10-2018 YH65_03600 4a80f7746fc76c4fb385df7952e915de 579 SUPERFAMILY SSF160246 36 165 4.18E-18 T 11-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily YH65_03600 4a80f7746fc76c4fb385df7952e915de 579 Gene3D G3DSA:3.30.300.160 88 166 7.1E-6 T 11-10-2018 YH65_03600 4a80f7746fc76c4fb385df7952e915de 579 SUPERFAMILY SSF52540 197 576 2.14E-95 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_03600 4a80f7746fc76c4fb385df7952e915de 579 Pfam PF00437 Type II/IV secretion system protein 214 471 6.6E-80 T 11-10-2018 IPR001482 Type II/IV secretion system protein YH65_03600 4a80f7746fc76c4fb385df7952e915de 579 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 36 171 2.0E-29 T 11-10-2018 IPR007831 General secretory system II, protein E, N-terminal YH65_03600 4a80f7746fc76c4fb385df7952e915de 579 Gene3D G3DSA:3.40.50.300 305 579 1.9E-105 T 11-10-2018 YH65_03600 4a80f7746fc76c4fb385df7952e915de 579 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 399 413 - T 11-10-2018 IPR001482 Type II/IV secretion system protein YH65_03810 03ddcd1d258de363819ee5366fa95a27 700 Pfam PF12836 Helix-hairpin-helix motif 480 544 4.3E-27 T 11-10-2018 YH65_03810 03ddcd1d258de363819ee5366fa95a27 700 Pfam PF16921 Tex protein YqgF-like domain 315 439 9.7E-49 T 11-10-2018 IPR032639 Tex protein, YqgF-like domain YH65_03810 03ddcd1d258de363819ee5366fa95a27 700 SMART SM00732 315 413 5.5E-27 T 11-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 YH65_03810 03ddcd1d258de363819ee5366fa95a27 700 SMART SM00316 625 697 6.9E-20 T 11-10-2018 IPR022967 RNA-binding domain, S1 YH65_03810 03ddcd1d258de363819ee5366fa95a27 700 SMART SM00278 493 512 65.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 YH65_03810 03ddcd1d258de363819ee5366fa95a27 700 SMART SM00278 523 542 19.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 YH65_03810 03ddcd1d258de363819ee5366fa95a27 700 SUPERFAMILY SSF47781 550 608 5.56E-12 T 11-10-2018 IPR010994 RuvA domain 2-like YH65_03810 03ddcd1d258de363819ee5366fa95a27 700 Gene3D G3DSA:1.10.10.650 2 108 6.5E-31 T 11-10-2018 IPR023319 Tex-like protein, HTH domain superfamily YH65_03810 03ddcd1d258de363819ee5366fa95a27 700 Gene3D G3DSA:2.40.50.140 611 699 1.3E-22 T 11-10-2018 YH65_03810 03ddcd1d258de363819ee5366fa95a27 700 Gene3D G3DSA:1.10.150.310 488 606 6.7E-40 T 11-10-2018 YH65_03810 03ddcd1d258de363819ee5366fa95a27 700 Pfam PF09371 Tex-like protein N-terminal domain 9 191 1.1E-54 T 11-10-2018 IPR018974 Tex-like protein, N-terminal YH65_03810 03ddcd1d258de363819ee5366fa95a27 700 Pfam PF00575 S1 RNA binding domain 625 697 1.5E-13 T 11-10-2018 IPR003029 S1 domain GO:0003676 YH65_03810 03ddcd1d258de363819ee5366fa95a27 700 SUPERFAMILY SSF50249 621 699 6.49E-19 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold YH65_03810 03ddcd1d258de363819ee5366fa95a27 700 SUPERFAMILY SSF47781 459 547 1.11E-26 T 11-10-2018 IPR010994 RuvA domain 2-like YH65_03810 03ddcd1d258de363819ee5366fa95a27 700 Gene3D G3DSA:3.30.420.140 314 440 5.5E-131 T 11-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 YH65_03810 03ddcd1d258de363819ee5366fa95a27 700 SUPERFAMILY SSF53098 311 458 1.44E-41 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily YH65_03810 03ddcd1d258de363819ee5366fa95a27 700 SUPERFAMILY SSF158832 2 310 9.29E-88 T 11-10-2018 YH65_03810 03ddcd1d258de363819ee5366fa95a27 700 Gene3D G3DSA:1.10.3500.10 111 487 5.5E-131 T 11-10-2018 IPR023323 Tex-like domain superfamily YH65_10645 e1a389b4be2f9cc325744dc1f972a90e 152 Pfam PF03719 Ribosomal protein S5, C-terminal domain 90 151 3.2E-26 T 11-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 YH65_10645 e1a389b4be2f9cc325744dc1f972a90e 152 Gene3D G3DSA:3.30.160.20 5 76 3.2E-31 T 11-10-2018 YH65_10645 e1a389b4be2f9cc325744dc1f972a90e 152 Pfam PF00333 Ribosomal protein S5, N-terminal domain 14 78 5.0E-28 T 11-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 YH65_10645 e1a389b4be2f9cc325744dc1f972a90e 152 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 11 151 3.2E-65 T 11-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 YH65_10645 e1a389b4be2f9cc325744dc1f972a90e 152 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 152 31.991 T 11-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 YH65_10645 e1a389b4be2f9cc325744dc1f972a90e 152 Gene3D G3DSA:3.30.230.10 77 152 1.1E-31 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YH65_10645 e1a389b4be2f9cc325744dc1f972a90e 152 SUPERFAMILY SSF54768 10 79 6.38E-23 T 11-10-2018 YH65_10645 e1a389b4be2f9cc325744dc1f972a90e 152 SUPERFAMILY SSF54211 83 150 4.8E-23 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold YH65_10645 e1a389b4be2f9cc325744dc1f972a90e 152 ProSitePatterns PS00585 Ribosomal protein S5 signature. 31 63 - T 11-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site YH65_02875 825c9ab337e5141036d965ecd0f03330 240 Gene3D G3DSA:3.30.70.580 1 104 4.0E-28 T 11-10-2018 YH65_02875 825c9ab337e5141036d965ecd0f03330 240 PIRSF PIRSF001430 1 240 7.3E-71 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 YH65_02875 825c9ab337e5141036d965ecd0f03330 240 SUPERFAMILY SSF55120 1 240 2.16E-62 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 YH65_02875 825c9ab337e5141036d965ecd0f03330 240 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 240 30.763 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 YH65_02875 825c9ab337e5141036d965ecd0f03330 240 Gene3D G3DSA:3.30.70.660 105 238 2.8E-26 T 11-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 YH65_02875 825c9ab337e5141036d965ecd0f03330 240 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 2 235 3.5E-54 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 YH65_02875 825c9ab337e5141036d965ecd0f03330 240 Pfam PF01416 tRNA pseudouridine synthase 140 240 6.8E-16 T 11-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 YH65_02875 825c9ab337e5141036d965ecd0f03330 240 Pfam PF01416 tRNA pseudouridine synthase 5 102 5.9E-10 T 11-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 YH65_06845 4f900cd6391e028514a58dbee11ef87e 333 Pfam PF13343 Bacterial extracellular solute-binding protein 76 315 2.0E-23 T 11-10-2018 YH65_06845 4f900cd6391e028514a58dbee11ef87e 333 SUPERFAMILY SSF53850 22 320 4.04E-66 T 11-10-2018 YH65_06845 4f900cd6391e028514a58dbee11ef87e 333 Gene3D G3DSA:3.40.190.10 127 315 4.2E-76 T 11-10-2018 YH65_06845 4f900cd6391e028514a58dbee11ef87e 333 PIRSF PIRSF002825 6 330 1.8E-77 T 11-10-2018 IPR026045 Ferric binding protein YH65_06845 4f900cd6391e028514a58dbee11ef87e 333 Gene3D G3DSA:3.40.190.10 27 296 4.2E-76 T 11-10-2018 YH65_04275 d0adf6ef0fd80e6a95edd40e9ba55604 639 Gene3D G3DSA:3.30.413.10 381 517 6.0E-26 T 11-10-2018 YH65_04275 d0adf6ef0fd80e6a95edd40e9ba55604 639 Gene3D G3DSA:3.30.413.10 126 302 6.2E-108 T 11-10-2018 YH65_04275 d0adf6ef0fd80e6a95edd40e9ba55604 639 SUPERFAMILY SSF56014 135 291 1.57E-34 T 11-10-2018 YH65_04275 d0adf6ef0fd80e6a95edd40e9ba55604 639 Gene3D G3DSA:3.90.480.20 16 371 6.2E-108 T 11-10-2018 YH65_04275 d0adf6ef0fd80e6a95edd40e9ba55604 639 SUPERFAMILY SSF55124 13 131 1.28E-24 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 YH65_04275 d0adf6ef0fd80e6a95edd40e9ba55604 639 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 421 503 9.3E-7 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 YH65_04275 d0adf6ef0fd80e6a95edd40e9ba55604 639 SUPERFAMILY SSF56014 384 513 6.54E-23 T 11-10-2018 YH65_04275 d0adf6ef0fd80e6a95edd40e9ba55604 639 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 134 285 1.5E-24 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 YH65_04275 d0adf6ef0fd80e6a95edd40e9ba55604 639 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 309 367 9.1E-11 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 YH65_04275 d0adf6ef0fd80e6a95edd40e9ba55604 639 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 63 125 5.5E-13 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 YH65_04275 d0adf6ef0fd80e6a95edd40e9ba55604 639 SUPERFAMILY SSF55124 264 394 1.96E-13 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 YH65_03560 0d11d357065d9541a78cc99466981e4f 442 SUPERFAMILY SSF52540 3 437 1.63E-76 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_03560 0d11d357065d9541a78cc99466981e4f 442 Pfam PF07724 AAA domain (Cdc48 subfamily) 52 115 3.1E-7 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 YH65_03560 0d11d357065d9541a78cc99466981e4f 442 Pfam PF07724 AAA domain (Cdc48 subfamily) 201 327 8.5E-36 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 YH65_03560 0d11d357065d9541a78cc99466981e4f 442 SMART SM01086 334 430 2.1E-21 T 11-10-2018 IPR019489 Clp ATPase, C-terminal YH65_03560 0d11d357065d9541a78cc99466981e4f 442 Gene3D G3DSA:1.10.8.60 334 439 4.3E-36 T 11-10-2018 YH65_03560 0d11d357065d9541a78cc99466981e4f 442 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 334 404 1.1E-6 T 11-10-2018 IPR019489 Clp ATPase, C-terminal YH65_03560 0d11d357065d9541a78cc99466981e4f 442 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 442 2.0E-186 T 11-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 YH65_03560 0d11d357065d9541a78cc99466981e4f 442 SMART SM00382 49 331 3.4E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain YH65_03985 8b075f0b7de253fc6a25198c42ee50e6 340 Gene3D G3DSA:3.90.230.10 112 340 4.1E-68 T 11-10-2018 YH65_03985 8b075f0b7de253fc6a25198c42ee50e6 340 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 280 292 - T 11-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site YH65_03985 8b075f0b7de253fc6a25198c42ee50e6 340 SUPERFAMILY SSF55920 67 340 3.4E-60 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like YH65_03985 8b075f0b7de253fc6a25198c42ee50e6 340 Gene3D G3DSA:3.40.350.10 1 111 1.2E-13 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal YH65_03985 8b075f0b7de253fc6a25198c42ee50e6 340 PRINTS PR00599 Methionine aminopeptidase-1 signature 172 185 1.6E-5 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 YH65_03985 8b075f0b7de253fc6a25198c42ee50e6 340 PRINTS PR00599 Methionine aminopeptidase-1 signature 302 314 1.6E-5 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 YH65_03985 8b075f0b7de253fc6a25198c42ee50e6 340 PRINTS PR00599 Methionine aminopeptidase-1 signature 194 210 1.6E-5 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 YH65_03985 8b075f0b7de253fc6a25198c42ee50e6 340 Pfam PF00557 Metallopeptidase family M24 120 332 1.2E-56 T 11-10-2018 IPR000994 Peptidase M24 YH65_05805 ee2d904ae8a4a0a8f34d13f6eb8b109f 273 Gene3D G3DSA:3.30.1330.10 3 126 5.2E-31 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily YH65_05805 ee2d904ae8a4a0a8f34d13f6eb8b109f 273 Gene3D G3DSA:3.90.650.10 130 271 5.3E-14 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily YH65_05805 ee2d904ae8a4a0a8f34d13f6eb8b109f 273 SUPERFAMILY SSF55326 9 122 1.08E-24 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily YH65_05805 ee2d904ae8a4a0a8f34d13f6eb8b109f 273 SUPERFAMILY SSF56042 128 263 7.06E-12 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily YH65_05805 ee2d904ae8a4a0a8f34d13f6eb8b109f 273 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 2 272 19.3 T 11-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 YH65_05805 ee2d904ae8a4a0a8f34d13f6eb8b109f 273 Pfam PF00586 AIR synthase related protein, N-terminal domain 18 122 3.8E-16 T 11-10-2018 IPR016188 PurM-like, N-terminal domain YH65_02585 e92812ef7d255dbd0a329a1ce28075b7 203 Gene3D G3DSA:1.10.10.10 112 195 2.7E-8 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YH65_02585 e92812ef7d255dbd0a329a1ce28075b7 203 SUPERFAMILY SSF52172 20 151 1.12E-10 T 11-10-2018 IPR011006 CheY-like superfamily YH65_02585 e92812ef7d255dbd0a329a1ce28075b7 203 Gene3D G3DSA:3.40.50.2300 3 111 1.5E-11 T 11-10-2018 YH65_01135 11921a18a8ae758c37de18a63cf01d81 391 SUPERFAMILY SSF53639 16 214 5.1E-28 T 11-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily YH65_01135 11921a18a8ae758c37de18a63cf01d81 391 Gene3D G3DSA:3.40.225.10 15 220 1.1E-54 T 11-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily YH65_01135 11921a18a8ae758c37de18a63cf01d81 391 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 21 211 7.5E-24 T 11-10-2018 IPR001303 Class II aldolase/adducin N-terminal YH65_01135 11921a18a8ae758c37de18a63cf01d81 391 SMART SM01007 19 214 2.0E-27 T 11-10-2018 IPR001303 Class II aldolase/adducin N-terminal YH65_00395 7fc6234a66d788c49cfeedd58f40140f 515 Pfam PF00501 AMP-binding enzyme 14 415 3.2E-108 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 YH65_00395 7fc6234a66d788c49cfeedd58f40140f 515 ProSitePatterns PS00455 Putative AMP-binding domain signature. 168 179 - T 11-10-2018 IPR020845 AMP-binding, conserved site YH65_00395 7fc6234a66d788c49cfeedd58f40140f 515 Gene3D G3DSA:3.40.50.12780 3 408 5.6E-116 T 11-10-2018 YH65_00395 7fc6234a66d788c49cfeedd58f40140f 515 Gene3D G3DSA:3.30.300.310 411 514 4.7E-27 T 11-10-2018 YH65_00395 7fc6234a66d788c49cfeedd58f40140f 515 SUPERFAMILY SSF56801 6 512 2.49E-144 T 11-10-2018 YH65_00395 7fc6234a66d788c49cfeedd58f40140f 515 Pfam PF13193 AMP-binding enzyme C-terminal domain 424 500 1.7E-16 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain YH65_01065 760ff0ed39912725350baa75b7cb8a16 70 SMART SM00278 41 60 0.73 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 YH65_01065 760ff0ed39912725350baa75b7cb8a16 70 SMART SM00278 12 31 0.0046 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 YH65_01065 760ff0ed39912725350baa75b7cb8a16 70 Pfam PF12836 Helix-hairpin-helix motif 6 59 4.0E-17 T 11-10-2018 YH65_01065 760ff0ed39912725350baa75b7cb8a16 70 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 5 60 1.1E-15 T 11-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain YH65_01065 760ff0ed39912725350baa75b7cb8a16 70 SUPERFAMILY SSF47781 5 61 3.33E-18 T 11-10-2018 IPR010994 RuvA domain 2-like YH65_01065 760ff0ed39912725350baa75b7cb8a16 70 PIRSF PIRSF002134 4 44 0.01 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_01065 760ff0ed39912725350baa75b7cb8a16 70 PIRSF PIRSF002134 34 70 0.12 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_01065 760ff0ed39912725350baa75b7cb8a16 70 Gene3D G3DSA:1.10.150.280 1 66 3.7E-18 T 11-10-2018 YH65_01335 d3183ed89f9a0336d3e075b9f3f25e11 70 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 39 2.0E-4 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_01335 d3183ed89f9a0336d3e075b9f3f25e11 70 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 4 59 2.0E-17 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_01335 d3183ed89f9a0336d3e075b9f3f25e11 70 Gene3D G3DSA:1.20.5.1150 16 55 6.4E-6 T 11-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_01335 d3183ed89f9a0336d3e075b9f3f25e11 70 Pfam PF01165 Ribosomal protein S21 10 56 8.7E-13 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_01335 d3183ed89f9a0336d3e075b9f3f25e11 70 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.8E-5 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_01335 d3183ed89f9a0336d3e075b9f3f25e11 70 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.8E-5 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_01335 d3183ed89f9a0336d3e075b9f3f25e11 70 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.8E-5 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_01335 d3183ed89f9a0336d3e075b9f3f25e11 70 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 16.005 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_02305 6b79a391e95a4ea42ae26aa52491ebc3 376 Gene3D G3DSA:3.40.50.2000 180 355 4.8E-52 T 11-10-2018 YH65_02305 6b79a391e95a4ea42ae26aa52491ebc3 376 Gene3D G3DSA:3.40.50.2000 28 365 4.8E-52 T 11-10-2018 YH65_02305 6b79a391e95a4ea42ae26aa52491ebc3 376 Pfam PF13439 Glycosyltransferase Family 4 28 180 3.0E-11 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 YH65_02305 6b79a391e95a4ea42ae26aa52491ebc3 376 SUPERFAMILY SSF53756 18 371 2.9E-63 T 11-10-2018 YH65_02305 6b79a391e95a4ea42ae26aa52491ebc3 376 Pfam PF00534 Glycosyl transferases group 1 190 339 2.1E-33 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 YH65_07330 c2e52297bda66c1fdc42b7aae10bf55e 336 Gene3D G3DSA:3.90.1150.10 24 334 4.1E-66 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 YH65_07330 c2e52297bda66c1fdc42b7aae10bf55e 336 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 194 207 - T 11-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 YH65_07330 c2e52297bda66c1fdc42b7aae10bf55e 336 Gene3D G3DSA:3.40.640.10 36 242 4.1E-66 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 YH65_07330 c2e52297bda66c1fdc42b7aae10bf55e 336 SUPERFAMILY SSF53383 3 335 4.34E-47 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase YH65_07330 c2e52297bda66c1fdc42b7aae10bf55e 336 Pfam PF00155 Aminotransferase class I and II 47 334 3.0E-21 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YH65_07960 cee7a0ba578cc8f651ede166039ccc40 190 SMART SM01007 7 185 1.8E-22 T 11-10-2018 IPR001303 Class II aldolase/adducin N-terminal YH65_07960 cee7a0ba578cc8f651ede166039ccc40 190 SUPERFAMILY SSF53639 3 186 1.16E-29 T 11-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily YH65_07960 cee7a0ba578cc8f651ede166039ccc40 190 Gene3D G3DSA:3.40.225.10 1 190 2.7E-22 T 11-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily YH65_07960 cee7a0ba578cc8f651ede166039ccc40 190 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 183 2.5E-21 T 11-10-2018 IPR001303 Class II aldolase/adducin N-terminal YH65_10610 70141828bae7d532dc6380870c1c93bc 122 SUPERFAMILY SSF50193 1 121 2.49E-52 T 11-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 YH65_10610 70141828bae7d532dc6380870c1c93bc 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 26.154 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 YH65_10610 70141828bae7d532dc6380870c1c93bc 122 Gene3D G3DSA:2.40.150.20 1 122 2.4E-54 T 11-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 YH65_10610 70141828bae7d532dc6380870c1c93bc 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 11-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_10610 70141828bae7d532dc6380870c1c93bc 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 121 1.3E-55 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 YH65_10610 70141828bae7d532dc6380870c1c93bc 122 SMART SM01374 1 122 3.6E-85 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 YH65_10610 70141828bae7d532dc6380870c1c93bc 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 121 2.2E-57 T 11-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 YH65_01185 0350a46c9110b98ff9ae988fc88000b3 59 Gene3D G3DSA:1.20.5.1030 1 58 3.6E-13 T 11-10-2018 IPR038379 SecE superfamily YH65_01185 0350a46c9110b98ff9ae988fc88000b3 59 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 5 58 2.8E-15 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 YH65_01185 0350a46c9110b98ff9ae988fc88000b3 59 Hamap MF_00422 Protein translocase subunit SecE [secE]. 2 57 11.518 T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 YH65_01185 0350a46c9110b98ff9ae988fc88000b3 59 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 6 56 4.3E-13 T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 YH65_00705 c6c0973669973761cc06c301260a5a90 887 Gene3D G3DSA:2.70.150.10 2 212 0.0 T 11-10-2018 YH65_00705 c6c0973669973761cc06c301260a5a90 887 Pfam PF00122 E1-E2 ATPase 98 289 1.3E-53 T 11-10-2018 YH65_00705 c6c0973669973761cc06c301260a5a90 887 Pfam PF00690 Cation transporter/ATPase, N-terminus 1 57 1.3E-18 T 11-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 YH65_00705 c6c0973669973761cc06c301260a5a90 887 SUPERFAMILY SSF56784 307 714 6.76E-62 T 11-10-2018 IPR036412 HAD-like superfamily YH65_00705 c6c0973669973761cc06c301260a5a90 887 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 68 161 1.9E-19 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 YH65_00705 c6c0973669973761cc06c301260a5a90 887 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 409 559 4.6E-19 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 YH65_00705 c6c0973669973761cc06c301260a5a90 887 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 189 330 3.7E-27 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 YH65_00705 c6c0973669973761cc06c301260a5a90 887 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 581 700 8.4E-34 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 YH65_00705 c6c0973669973761cc06c301260a5a90 887 Gene3D G3DSA:3.40.50.1000 306 655 0.0 T 11-10-2018 IPR023214 HAD superfamily YH65_00705 c6c0973669973761cc06c301260a5a90 887 Gene3D G3DSA:3.40.1110.10 319 517 0.0 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 YH65_00705 c6c0973669973761cc06c301260a5a90 887 Pfam PF00702 haloacid dehalogenase-like hydrolase 306 624 9.0E-28 T 11-10-2018 YH65_00705 c6c0973669973761cc06c301260a5a90 887 SUPERFAMILY SSF81660 316 514 1.53E-53 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 YH65_00705 c6c0973669973761cc06c301260a5a90 887 SUPERFAMILY SSF81653 100 208 3.4E-31 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 YH65_00705 c6c0973669973761cc06c301260a5a90 887 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 311 317 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 YH65_00705 c6c0973669973761cc06c301260a5a90 887 Pfam PF00689 Cation transporting ATPase, C-terminus 694 869 1.5E-44 T 11-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 YH65_00705 c6c0973669973761cc06c301260a5a90 887 Gene3D G3DSA:1.20.1110.10 40 869 0.0 T 11-10-2018 YH65_00705 c6c0973669973761cc06c301260a5a90 887 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 642 667 4.3E-17 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 YH65_00705 c6c0973669973761cc06c301260a5a90 887 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 582 598 4.3E-17 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 YH65_00705 c6c0973669973761cc06c301260a5a90 887 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 469 487 4.3E-17 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 YH65_00705 c6c0973669973761cc06c301260a5a90 887 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 610 626 4.3E-17 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 YH65_00705 c6c0973669973761cc06c301260a5a90 887 SUPERFAMILY SSF81665 1 873 9.68E-127 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 YH65_00705 c6c0973669973761cc06c301260a5a90 887 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 510 521 4.0E-43 T 11-10-2018 YH65_00705 c6c0973669973761cc06c301260a5a90 887 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 634 646 4.0E-43 T 11-10-2018 YH65_00705 c6c0973669973761cc06c301260a5a90 887 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 610 629 4.0E-43 T 11-10-2018 YH65_00705 c6c0973669973761cc06c301260a5a90 887 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 147 161 4.0E-43 T 11-10-2018 YH65_00705 c6c0973669973761cc06c301260a5a90 887 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 532 542 4.0E-43 T 11-10-2018 YH65_00705 c6c0973669973761cc06c301260a5a90 887 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 309 323 4.0E-43 T 11-10-2018 YH65_00705 c6c0973669973761cc06c301260a5a90 887 SMART SM00831 1 62 4.1E-16 T 11-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 YH65_08375 e5e72f62b76aa19eb89433817d8d20c5 529 Gene3D G3DSA:3.30.70.260 457 529 7.6E-16 T 11-10-2018 YH65_08375 e5e72f62b76aa19eb89433817d8d20c5 529 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 6 317 3.5E-30 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 YH65_08375 e5e72f62b76aa19eb89433817d8d20c5 529 TIGRFAM TIGR01327 PGDH: phosphoglycerate dehydrogenase 6 528 1.7E-185 T 11-10-2018 IPR006236 D-3-phosphoglycerate dehydrogenase GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|Reactome: R-HSA-977347 YH65_08375 e5e72f62b76aa19eb89433817d8d20c5 529 Gene3D G3DSA:3.30.1330.90 323 456 1.8E-31 T 11-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 YH65_08375 e5e72f62b76aa19eb89433817d8d20c5 529 SUPERFAMILY SSF51735 101 286 4.87E-55 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily YH65_08375 e5e72f62b76aa19eb89433817d8d20c5 529 Gene3D G3DSA:3.40.50.720 8 309 1.4E-103 T 11-10-2018 YH65_08375 e5e72f62b76aa19eb89433817d8d20c5 529 SUPERFAMILY SSF52283 21 122 1.46E-27 T 11-10-2018 YH65_08375 e5e72f62b76aa19eb89433817d8d20c5 529 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 285 1.5E-58 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 YH65_08375 e5e72f62b76aa19eb89433817d8d20c5 529 Pfam PF01842 ACT domain 457 519 1.4E-9 T 11-10-2018 IPR002912 ACT domain YH65_08375 e5e72f62b76aa19eb89433817d8d20c5 529 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 148 175 - T 11-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 YH65_08375 e5e72f62b76aa19eb89433817d8d20c5 529 SUPERFAMILY SSF143548 324 452 9.68E-32 T 11-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 YH65_08375 e5e72f62b76aa19eb89433817d8d20c5 529 SUPERFAMILY SSF55021 447 524 1.34E-14 T 11-10-2018 YH65_08375 e5e72f62b76aa19eb89433817d8d20c5 529 Gene3D G3DSA:3.40.50.720 101 283 1.4E-103 T 11-10-2018 YH65_02495 7b9c52125afc18873e280c94490a3af0 600 SUPERFAMILY SSF52540 248 536 1.22E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_02495 7b9c52125afc18873e280c94490a3af0 600 Gene3D G3DSA:3.40.50.300 174 393 6.1E-51 T 11-10-2018 YH65_02495 7b9c52125afc18873e280c94490a3af0 600 SUPERFAMILY SSF50249 5 125 1.23E-6 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold YH65_02495 7b9c52125afc18873e280c94490a3af0 600 Pfam PF00271 Helicase conserved C-terminal domain 415 525 5.1E-11 T 11-10-2018 IPR001650 Helicase, C-terminal YH65_02495 7b9c52125afc18873e280c94490a3af0 600 Pfam PF00270 DEAD/DEAH box helicase 228 374 8.6E-10 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 YH65_02495 7b9c52125afc18873e280c94490a3af0 600 SMART SM00487 220 401 1.3E-21 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain YH65_02495 7b9c52125afc18873e280c94490a3af0 600 Gene3D G3DSA:3.40.50.300 399 562 1.2E-35 T 11-10-2018 YH65_02495 7b9c52125afc18873e280c94490a3af0 600 SMART SM00490 446 525 2.4E-12 T 11-10-2018 IPR001650 Helicase, C-terminal YH65_02100 5b81c5be20895c3c24c6c6c8384e9712 331 SUPERFAMILY SSF142754 4 330 3.92E-91 T 11-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 YH65_02100 5b81c5be20895c3c24c6c6c8384e9712 331 Gene3D G3DSA:3.40.50.10800 86 329 1.7E-89 T 11-10-2018 YH65_02100 5b81c5be20895c3c24c6c6c8384e9712 331 Gene3D G3DSA:3.40.50.10800 7 311 1.7E-89 T 11-10-2018 YH65_02100 5b81c5be20895c3c24c6c6c8384e9712 331 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 3 330 2.7E-98 T 11-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 YH65_02100 5b81c5be20895c3c24c6c6c8384e9712 331 Pfam PF02445 Quinolinate synthetase A protein 8 329 2.7E-94 T 11-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 YH65_02100 5b81c5be20895c3c24c6c6c8384e9712 331 Gene3D G3DSA:3.40.50.10800 197 281 1.7E-89 T 11-10-2018 YH65_10680 ac4ebd7b34c8abf884d6b931b3d49da7 124 PIRSF PIRSF002131 1 124 3.6E-46 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 YH65_10680 ac4ebd7b34c8abf884d6b931b3d49da7 124 Gene3D G3DSA:3.30.420.80 1 124 1.6E-47 T 11-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 YH65_10680 ac4ebd7b34c8abf884d6b931b3d49da7 124 SUPERFAMILY SSF53137 7 124 1.05E-41 T 11-10-2018 YH65_10680 ac4ebd7b34c8abf884d6b931b3d49da7 124 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 124 31.613 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 YH65_10680 ac4ebd7b34c8abf884d6b931b3d49da7 124 Pfam PF00411 Ribosomal protein S11 13 123 3.1E-42 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 YH65_10680 ac4ebd7b34c8abf884d6b931b3d49da7 124 ProSitePatterns PS00054 Ribosomal protein S11 signature. 91 114 - T 11-10-2018 IPR018102 Ribosomal S11, conserved site YH65_10680 ac4ebd7b34c8abf884d6b931b3d49da7 124 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 4 121 6.4E-52 T 11-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 YH65_06630 692e01cbd53bd19de1fa23b6e866e3e1 153 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 153 22.681 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 YH65_06630 692e01cbd53bd19de1fa23b6e866e3e1 153 PIRSF PIRSF004505 1 153 2.7E-40 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 YH65_06630 692e01cbd53bd19de1fa23b6e866e3e1 153 Gene3D G3DSA:3.40.1280.10 1 153 8.5E-39 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YH65_06630 692e01cbd53bd19de1fa23b6e866e3e1 153 Pfam PF02590 Predicted SPOUT methyltransferase 1 152 5.9E-37 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 YH65_06630 692e01cbd53bd19de1fa23b6e866e3e1 153 SUPERFAMILY SSF75217 1 152 1.31E-34 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases YH65_03390 0e0fa13f8ca9fa3d4e23070f840d04cf 257 SMART SM00646 88 245 3.8E-32 T 11-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 YH65_03390 0e0fa13f8ca9fa3d4e23070f840d04cf 257 Gene3D G3DSA:3.40.630.40 22 255 8.1E-62 T 11-10-2018 YH65_03390 0e0fa13f8ca9fa3d4e23070f840d04cf 257 SUPERFAMILY SSF53187 29 248 2.48E-44 T 11-10-2018 YH65_03390 0e0fa13f8ca9fa3d4e23070f840d04cf 257 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 30 244 1.3E-43 T 11-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 YH65_10740 8a2f1ac9c0869c37f3c3fef5a37f1b3e 605 Gene3D G3DSA:3.30.70.870 305 587 9.3E-123 T 11-10-2018 YH65_10740 8a2f1ac9c0869c37f3c3fef5a37f1b3e 605 SUPERFAMILY SSF54980 302 385 5.11E-9 T 11-10-2018 IPR035647 EF-G domain III/V-like YH65_10740 8a2f1ac9c0869c37f3c3fef5a37f1b3e 605 PRINTS PR00315 GTP-binding elongation factor signature 122 131 2.7E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YH65_10740 8a2f1ac9c0869c37f3c3fef5a37f1b3e 605 PRINTS PR00315 GTP-binding elongation factor signature 6 19 2.7E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YH65_10740 8a2f1ac9c0869c37f3c3fef5a37f1b3e 605 PRINTS PR00315 GTP-binding elongation factor signature 50 58 2.7E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YH65_10740 8a2f1ac9c0869c37f3c3fef5a37f1b3e 605 PRINTS PR00315 GTP-binding elongation factor signature 70 80 2.7E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YH65_10740 8a2f1ac9c0869c37f3c3fef5a37f1b3e 605 SUPERFAMILY SSF52540 3 203 5.31E-52 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_10740 8a2f1ac9c0869c37f3c3fef5a37f1b3e 605 SUPERFAMILY SSF50447 178 300 2.55E-30 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily YH65_10740 8a2f1ac9c0869c37f3c3fef5a37f1b3e 605 Gene3D G3DSA:3.40.50.300 1 197 5.3E-64 T 11-10-2018 YH65_10740 8a2f1ac9c0869c37f3c3fef5a37f1b3e 605 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 43 58 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site YH65_10740 8a2f1ac9c0869c37f3c3fef5a37f1b3e 605 Gene3D G3DSA:2.40.50.250 480 596 9.3E-123 T 11-10-2018 YH65_10740 8a2f1ac9c0869c37f3c3fef5a37f1b3e 605 Gene3D G3DSA:3.30.70.240 387 479 9.3E-123 T 11-10-2018 YH65_10740 8a2f1ac9c0869c37f3c3fef5a37f1b3e 605 Pfam PF00679 Elongation factor G C-terminus 394 479 1.8E-22 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like YH65_10740 8a2f1ac9c0869c37f3c3fef5a37f1b3e 605 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 4 596 9.0E-277 T 11-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 YH65_10740 8a2f1ac9c0869c37f3c3fef5a37f1b3e 605 Pfam PF00009 Elongation factor Tu GTP binding domain 3 194 9.6E-53 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YH65_10740 8a2f1ac9c0869c37f3c3fef5a37f1b3e 605 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 138 1.6E-23 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 YH65_10740 8a2f1ac9c0869c37f3c3fef5a37f1b3e 605 Gene3D G3DSA:2.40.30.10 199 298 1.9E-29 T 11-10-2018 YH65_10740 8a2f1ac9c0869c37f3c3fef5a37f1b3e 605 SUPERFAMILY SSF54980 396 510 2.11E-26 T 11-10-2018 IPR035647 EF-G domain III/V-like YH65_10740 8a2f1ac9c0869c37f3c3fef5a37f1b3e 605 Pfam PF03144 Elongation factor Tu domain 2 218 288 5.2E-12 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 YH65_02170 be124dd9f1b5a2713c1c394014a130ec 604 SUPERFAMILY SSF141868 357 603 8.89E-85 T 11-10-2018 IPR035919 EAL domain superfamily YH65_02170 be124dd9f1b5a2713c1c394014a130ec 604 Pfam PF00563 EAL domain 359 592 3.0E-70 T 11-10-2018 IPR001633 EAL domain YH65_02170 be124dd9f1b5a2713c1c394014a130ec 604 SMART SM00052 351 597 2.9E-99 T 11-10-2018 IPR001633 EAL domain YH65_02170 be124dd9f1b5a2713c1c394014a130ec 604 Gene3D G3DSA:3.30.450.20 53 171 8.3E-7 T 11-10-2018 YH65_02170 be124dd9f1b5a2713c1c394014a130ec 604 Pfam PF00990 Diguanylate cyclase, GGDEF domain 183 334 6.6E-17 T 11-10-2018 IPR000160 GGDEF domain YH65_02170 be124dd9f1b5a2713c1c394014a130ec 604 Gene3D G3DSA:3.20.20.450 353 604 5.9E-91 T 11-10-2018 IPR035919 EAL domain superfamily YH65_02170 be124dd9f1b5a2713c1c394014a130ec 604 Gene3D G3DSA:3.30.70.270 181 350 7.6E-21 T 11-10-2018 YH65_02170 be124dd9f1b5a2713c1c394014a130ec 604 SUPERFAMILY SSF55073 185 341 3.45E-20 T 11-10-2018 IPR029787 Nucleotide cyclase YH65_02170 be124dd9f1b5a2713c1c394014a130ec 604 SMART SM00267 175 341 8.7E-8 T 11-10-2018 IPR000160 GGDEF domain YH65_02545 b3e82e55902866c567af34ca63f633fd 1062 SUPERFAMILY SSF47384 399 480 2.55E-22 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 YH65_02545 b3e82e55902866c567af34ca63f633fd 1062 SMART SM00448 791 907 3.0E-32 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YH65_02545 b3e82e55902866c567af34ca63f633fd 1062 Pfam PF00512 His Kinase A (phospho-acceptor) domain 415 478 2.7E-20 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YH65_02545 b3e82e55902866c567af34ca63f633fd 1062 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 526 643 1.1E-29 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YH65_02545 b3e82e55902866c567af34ca63f633fd 1062 Gene3D G3DSA:3.30.565.10 480 645 1.8E-48 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YH65_02545 b3e82e55902866c567af34ca63f633fd 1062 SMART SM00387 526 644 2.3E-38 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YH65_02545 b3e82e55902866c567af34ca63f633fd 1062 SUPERFAMILY SSF52172 791 911 2.42E-36 T 11-10-2018 IPR011006 CheY-like superfamily YH65_02545 b3e82e55902866c567af34ca63f633fd 1062 Pfam PF08376 Nitrate and nitrite sensing 54 301 5.8E-26 T 11-10-2018 IPR013587 Nitrate/nitrite sensing protein YH65_02545 b3e82e55902866c567af34ca63f633fd 1062 Gene3D G3DSA:3.40.50.12740 790 988 2.3E-41 T 11-10-2018 YH65_02545 b3e82e55902866c567af34ca63f633fd 1062 Gene3D G3DSA:1.10.287.130 380 477 8.4E-28 T 11-10-2018 YH65_02545 b3e82e55902866c567af34ca63f633fd 1062 Pfam PF00072 Response regulator receiver domain 793 906 4.5E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YH65_02545 b3e82e55902866c567af34ca63f633fd 1062 PRINTS PR00344 Bacterial sensor protein C-terminal signature 569 583 3.7E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YH65_02545 b3e82e55902866c567af34ca63f633fd 1062 PRINTS PR00344 Bacterial sensor protein C-terminal signature 604 622 3.7E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YH65_02545 b3e82e55902866c567af34ca63f633fd 1062 PRINTS PR00344 Bacterial sensor protein C-terminal signature 587 597 3.7E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YH65_02545 b3e82e55902866c567af34ca63f633fd 1062 PRINTS PR00344 Bacterial sensor protein C-terminal signature 628 641 3.7E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YH65_02545 b3e82e55902866c567af34ca63f633fd 1062 SUPERFAMILY SSF55874 468 642 2.1E-44 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YH65_02545 b3e82e55902866c567af34ca63f633fd 1062 SMART SM00388 414 479 4.5E-27 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YH65_07275 1f071350fd1d066e70516b8960fa8168 325 Gene3D G3DSA:3.40.1030.10 56 325 1.4E-99 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 YH65_07275 1f071350fd1d066e70516b8960fa8168 325 SUPERFAMILY SSF52418 60 322 3.4E-89 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 YH65_07275 1f071350fd1d066e70516b8960fa8168 325 Pfam PF00591 Glycosyl transferase family, a/b domain 59 310 6.5E-85 T 11-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 YH65_07275 1f071350fd1d066e70516b8960fa8168 325 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 5 320 32.324 T 11-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 YH65_07275 1f071350fd1d066e70516b8960fa8168 325 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 3 317 1.2E-106 T 11-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 YH65_07275 1f071350fd1d066e70516b8960fa8168 325 Gene3D G3DSA:1.20.970.10 2 52 3.8E-7 T 11-10-2018 YH65_08655 51f0bdfc618f4c69221f396190c8583d 255 Pfam PF13098 Thioredoxin-like domain 150 244 4.0E-9 T 11-10-2018 IPR012336 Thioredoxin-like fold YH65_08655 51f0bdfc618f4c69221f396190c8583d 255 Gene3D G3DSA:3.40.30.10 142 255 3.5E-18 T 11-10-2018 YH65_08655 51f0bdfc618f4c69221f396190c8583d 255 SUPERFAMILY SSF46626 9 130 1.23E-7 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_08655 51f0bdfc618f4c69221f396190c8583d 255 SUPERFAMILY SSF52833 143 247 8.55E-18 T 11-10-2018 IPR036249 Thioredoxin-like superfamily YH65_08655 51f0bdfc618f4c69221f396190c8583d 255 Gene3D G3DSA:1.10.760.10 6 141 3.3E-7 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_08685 51f0bdfc618f4c69221f396190c8583d 255 Pfam PF13098 Thioredoxin-like domain 150 244 4.0E-9 T 11-10-2018 IPR012336 Thioredoxin-like fold YH65_08685 51f0bdfc618f4c69221f396190c8583d 255 Gene3D G3DSA:3.40.30.10 142 255 3.5E-18 T 11-10-2018 YH65_08685 51f0bdfc618f4c69221f396190c8583d 255 SUPERFAMILY SSF46626 9 130 1.23E-7 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_08685 51f0bdfc618f4c69221f396190c8583d 255 SUPERFAMILY SSF52833 143 247 8.55E-18 T 11-10-2018 IPR036249 Thioredoxin-like superfamily YH65_08685 51f0bdfc618f4c69221f396190c8583d 255 Gene3D G3DSA:1.10.760.10 6 141 3.3E-7 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_08625 51f0bdfc618f4c69221f396190c8583d 255 Pfam PF13098 Thioredoxin-like domain 150 244 4.0E-9 T 11-10-2018 IPR012336 Thioredoxin-like fold YH65_08625 51f0bdfc618f4c69221f396190c8583d 255 Gene3D G3DSA:3.40.30.10 142 255 3.5E-18 T 11-10-2018 YH65_08625 51f0bdfc618f4c69221f396190c8583d 255 SUPERFAMILY SSF46626 9 130 1.23E-7 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_08625 51f0bdfc618f4c69221f396190c8583d 255 SUPERFAMILY SSF52833 143 247 8.55E-18 T 11-10-2018 IPR036249 Thioredoxin-like superfamily YH65_08625 51f0bdfc618f4c69221f396190c8583d 255 Gene3D G3DSA:1.10.760.10 6 141 3.3E-7 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_07195 3f87651e6cab6c098be5b96ddfec6308 539 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 336 519 2.9E-66 T 11-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_07195 3f87651e6cab6c098be5b96ddfec6308 539 PRINTS PR01900 YidC translocation/secretion protein signature 322 338 1.2E-17 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 YH65_07195 3f87651e6cab6c098be5b96ddfec6308 539 PRINTS PR01900 YidC translocation/secretion protein signature 472 496 1.2E-17 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 YH65_07195 3f87651e6cab6c098be5b96ddfec6308 539 PRINTS PR01900 YidC translocation/secretion protein signature 452 467 1.2E-17 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 YH65_07195 3f87651e6cab6c098be5b96ddfec6308 539 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 7 335 9.0E-43 T 11-10-2018 IPR028053 Membrane insertase YidC, N-terminal YH65_07195 3f87651e6cab6c098be5b96ddfec6308 539 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 8 521 19.788 T 11-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 YH65_07195 3f87651e6cab6c098be5b96ddfec6308 539 Pfam PF02096 60Kd inner membrane protein 337 519 4.7E-59 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 YH65_07195 3f87651e6cab6c098be5b96ddfec6308 539 Pfam PF14849 YidC periplasmic domain 286 326 6.9E-9 T 11-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain YH65_08305 a85bf6bdb83c4b596b1baf10cfb2b029 1188 Pfam PF14579 Helix-hairpin-helix motif 830 921 2.3E-24 T 11-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YH65_08305 a85bf6bdb83c4b596b1baf10cfb2b029 1188 Pfam PF02811 PHP domain 13 191 2.0E-52 T 11-10-2018 IPR004013 PHP domain GO:0003824 YH65_08305 a85bf6bdb83c4b596b1baf10cfb2b029 1188 Gene3D G3DSA:1.10.150.870 796 910 3.9E-7 T 11-10-2018 YH65_08305 a85bf6bdb83c4b596b1baf10cfb2b029 1188 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 331 757 2.7E-174 T 11-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YH65_08305 a85bf6bdb83c4b596b1baf10cfb2b029 1188 Gene3D G3DSA:1.10.10.1600 464 541 2.1E-28 T 11-10-2018 YH65_08305 a85bf6bdb83c4b596b1baf10cfb2b029 1188 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 11 1053 0.0 T 11-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YH65_08305 a85bf6bdb83c4b596b1baf10cfb2b029 1188 SUPERFAMILY SSF89550 11 281 4.71E-33 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 YH65_08305 a85bf6bdb83c4b596b1baf10cfb2b029 1188 Gene3D G3DSA:3.20.20.140 1 287 7.1E-109 T 11-10-2018 YH65_08305 a85bf6bdb83c4b596b1baf10cfb2b029 1188 SMART SM00481 12 79 2.4E-32 T 11-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal YH65_04885 19f1f47089df07c5a0a82f0592b648b4 192 Pfam PF00849 RNA pseudouridylate synthase 11 142 2.5E-12 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 YH65_04885 19f1f47089df07c5a0a82f0592b648b4 192 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 15 180 1.3E-37 T 11-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 YH65_04885 19f1f47089df07c5a0a82f0592b648b4 192 Gene3D G3DSA:3.30.70.580 13 183 1.1E-40 T 11-10-2018 YH65_04885 19f1f47089df07c5a0a82f0592b648b4 192 SUPERFAMILY SSF55120 9 190 4.8E-31 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 YH65_04885 19f1f47089df07c5a0a82f0592b648b4 192 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 50 64 - T 11-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 YH65_04885 19f1f47089df07c5a0a82f0592b648b4 192 Gene3D G3DSA:3.30.70.1560 79 163 1.1E-40 T 11-10-2018 YH65_00085 2a79dcbe31bc3b8b2428775cf41ab9c4 188 Pfam PF12804 MobA-like NTP transferase domain 7 144 7.5E-26 T 11-10-2018 IPR025877 MobA-like NTP transferase YH65_00085 2a79dcbe31bc3b8b2428775cf41ab9c4 188 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 3 184 22.222 T 11-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 YH65_00085 2a79dcbe31bc3b8b2428775cf41ab9c4 188 SUPERFAMILY SSF53448 1 183 9.46E-25 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YH65_00085 2a79dcbe31bc3b8b2428775cf41ab9c4 188 Gene3D G3DSA:3.90.550.10 1 187 7.4E-44 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YH65_06405 2405502acde77d4286a2bbe91ab9a9a5 89 Pfam PF13192 Thioredoxin domain 1 74 5.6E-24 T 11-10-2018 IPR012336 Thioredoxin-like fold YH65_06405 2405502acde77d4286a2bbe91ab9a9a5 89 Gene3D G3DSA:3.40.30.10 1 73 3.0E-24 T 11-10-2018 YH65_06405 2405502acde77d4286a2bbe91ab9a9a5 89 PIRSF PIRSF037031 1 75 5.3E-27 T 11-10-2018 IPR005243 Redox-active disulphide protein 2 YH65_06405 2405502acde77d4286a2bbe91ab9a9a5 89 SUPERFAMILY SSF52833 1 73 1.4E-15 T 11-10-2018 IPR036249 Thioredoxin-like superfamily YH65_03645 5a79a334105e7874a28b4c4205bf98a9 435 Gene3D G3DSA:1.10.3430.10 10 435 1.8E-127 T 11-10-2018 IPR029020 Ammonium/urea transporter YH65_03645 5a79a334105e7874a28b4c4205bf98a9 435 PRINTS PR00342 Rhesus blood group protein signature 224 242 9.4E-7 T 11-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 YH65_03645 5a79a334105e7874a28b4c4205bf98a9 435 PRINTS PR00342 Rhesus blood group protein signature 127 143 9.4E-7 T 11-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 YH65_03645 5a79a334105e7874a28b4c4205bf98a9 435 PRINTS PR00342 Rhesus blood group protein signature 255 277 9.4E-7 T 11-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 YH65_03645 5a79a334105e7874a28b4c4205bf98a9 435 PRINTS PR00342 Rhesus blood group protein signature 310 328 9.4E-7 T 11-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 YH65_03645 5a79a334105e7874a28b4c4205bf98a9 435 Pfam PF00909 Ammonium Transporter Family 29 431 5.1E-106 T 11-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 YH65_03645 5a79a334105e7874a28b4c4205bf98a9 435 SUPERFAMILY SSF111352 23 409 2.35E-112 T 11-10-2018 YH65_03645 5a79a334105e7874a28b4c4205bf98a9 435 TIGRFAM TIGR00836 amt: ammonium transporter 27 431 4.1E-125 T 11-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 YH65_03645 5a79a334105e7874a28b4c4205bf98a9 435 ProSitePatterns PS01219 Ammonium transporters signature. 185 210 - T 11-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 YH65_08250 d052d548c6a1a3c868363e70f3c732db 379 SUPERFAMILY SSF52922 270 377 4.57E-24 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 YH65_08250 d052d548c6a1a3c868363e70f3c732db 379 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 18 252 5.9E-62 T 11-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 YH65_08250 d052d548c6a1a3c868363e70f3c732db 379 SUPERFAMILY SSF52518 8 261 2.11E-63 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold YH65_08250 d052d548c6a1a3c868363e70f3c732db 379 Gene3D G3DSA:3.40.50.920 266 379 2.3E-26 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 YH65_08250 d052d548c6a1a3c868363e70f3c732db 379 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 278 371 4.4E-22 T 11-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II YH65_08250 d052d548c6a1a3c868363e70f3c732db 379 Gene3D G3DSA:3.40.50.970 1 192 2.6E-62 T 11-10-2018 YH65_01115 04e9100e04cbdc0490dcebc1e1d32187 424 SUPERFAMILY SSF55469 269 424 4.43E-9 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 YH65_01115 04e9100e04cbdc0490dcebc1e1d32187 424 TIGRFAM TIGR03605 antibiot_sagB: SagB-type dehydrogenase domain 50 200 2.5E-23 T 11-10-2018 IPR020051 SagB-type dehydrogenase domain YH65_01115 04e9100e04cbdc0490dcebc1e1d32187 424 Gene3D G3DSA:3.40.109.10 4 423 6.1E-85 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 YH65_01115 04e9100e04cbdc0490dcebc1e1d32187 424 Gene3D G3DSA:3.40.109.10 21 252 6.1E-85 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 YH65_02415 7b5c6f933dfb0b161a879d05cfe096af 75 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 1 43 1.9E-10 T 11-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type YH65_02415 7b5c6f933dfb0b161a879d05cfe096af 75 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 1 38 2.8E-12 T 11-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type YH65_08710 090a759a9efdfd3c7e4f97a21f7bfb6d 591 Pfam PF02872 5'-nucleotidase, C-terminal domain 394 533 2.2E-12 T 11-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 YH65_08710 090a759a9efdfd3c7e4f97a21f7bfb6d 591 Gene3D G3DSA:3.60.21.10 110 390 3.8E-87 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like YH65_08710 090a759a9efdfd3c7e4f97a21f7bfb6d 591 PRINTS PR01607 Apyrase family signature 281 298 2.0E-16 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 YH65_08710 090a759a9efdfd3c7e4f97a21f7bfb6d 591 PRINTS PR01607 Apyrase family signature 51 69 2.0E-16 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 YH65_08710 090a759a9efdfd3c7e4f97a21f7bfb6d 591 PRINTS PR01607 Apyrase family signature 300 323 2.0E-16 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 YH65_08710 090a759a9efdfd3c7e4f97a21f7bfb6d 591 PRINTS PR01607 Apyrase family signature 328 348 2.0E-16 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 YH65_08710 090a759a9efdfd3c7e4f97a21f7bfb6d 591 PRINTS PR01607 Apyrase family signature 522 541 2.0E-16 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 YH65_08710 090a759a9efdfd3c7e4f97a21f7bfb6d 591 Gene3D G3DSA:3.90.780.10 391 588 1.0E-72 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 YH65_08710 090a759a9efdfd3c7e4f97a21f7bfb6d 591 TIGRFAM TIGR04486 thiosulf_SoxB: thiosulfohydrolase SoxB 4 579 2.6E-238 T 11-10-2018 IPR030998 Thiosulfohydrolase SoxB YH65_08710 090a759a9efdfd3c7e4f97a21f7bfb6d 591 Pfam PF00149 Calcineurin-like phosphoesterase 55 318 3.7E-4 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 YH65_08710 090a759a9efdfd3c7e4f97a21f7bfb6d 591 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 28 0.0012 T 11-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal YH65_08710 090a759a9efdfd3c7e4f97a21f7bfb6d 591 SUPERFAMILY SSF56300 51 390 2.69E-77 T 11-10-2018 YH65_08710 090a759a9efdfd3c7e4f97a21f7bfb6d 591 SUPERFAMILY SSF55816 388 580 8.37E-27 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 YH65_01730 f23340839c33c4fa7d64147d3fb149f7 221 SMART SM00448 1 107 2.9E-31 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YH65_01730 f23340839c33c4fa7d64147d3fb149f7 221 Pfam PF00072 Response regulator receiver domain 1 108 1.8E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YH65_01730 f23340839c33c4fa7d64147d3fb149f7 221 SUPERFAMILY SSF46894 129 218 1.79E-19 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YH65_01730 f23340839c33c4fa7d64147d3fb149f7 221 SUPERFAMILY SSF52172 1 123 7.12E-37 T 11-10-2018 IPR011006 CheY-like superfamily YH65_01730 f23340839c33c4fa7d64147d3fb149f7 221 Gene3D G3DSA:3.40.50.2300 1 132 1.1E-33 T 11-10-2018 YH65_01730 f23340839c33c4fa7d64147d3fb149f7 221 SMART SM00862 141 217 9.7E-17 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YH65_01730 f23340839c33c4fa7d64147d3fb149f7 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 144 217 2.2E-16 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YH65_01730 f23340839c33c4fa7d64147d3fb149f7 221 Gene3D G3DSA:1.10.10.10 133 221 6.3E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YH65_06510 969ec2c456c7dc6f807ee502f8ff3c21 208 Pfam PF00702 haloacid dehalogenase-like hydrolase 3 176 1.2E-19 T 11-10-2018 YH65_06510 969ec2c456c7dc6f807ee502f8ff3c21 208 SUPERFAMILY SSF56784 2 207 1.87E-50 T 11-10-2018 IPR036412 HAD-like superfamily YH65_06510 969ec2c456c7dc6f807ee502f8ff3c21 208 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 4 174 1.0E-28 T 11-10-2018 YH65_06510 969ec2c456c7dc6f807ee502f8ff3c21 208 Gene3D G3DSA:3.40.50.1000 1 207 4.4E-66 T 11-10-2018 IPR023214 HAD superfamily YH65_06510 969ec2c456c7dc6f807ee502f8ff3c21 208 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 2 207 7.0E-72 T 11-10-2018 YH65_01935 99aa914ff0fc3a3d6dd52457ddad5f27 338 SUPERFAMILY SSF53901 11 332 1.04E-64 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 YH65_01935 99aa914ff0fc3a3d6dd52457ddad5f27 338 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 113 192 5.1E-32 T 11-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 YH65_01935 99aa914ff0fc3a3d6dd52457ddad5f27 338 Gene3D G3DSA:3.40.47.10 5 337 1.5E-125 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 YH65_01935 99aa914ff0fc3a3d6dd52457ddad5f27 338 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 8 331 3.0E-137 T 11-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 YH65_01935 99aa914ff0fc3a3d6dd52457ddad5f27 338 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 244 331 2.8E-31 T 11-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 YH65_01935 99aa914ff0fc3a3d6dd52457ddad5f27 338 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 7 333 70.102 T 11-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 YH65_04370 ef8ae24467d1daeb0e951fb6dcba72cc 453 SUPERFAMILY SSF51703 3 452 6.8E-163 T 11-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 YH65_04370 ef8ae24467d1daeb0e951fb6dcba72cc 453 PIRSF PIRSF001495 2 448 1.0E-118 T 11-10-2018 IPR006396 Glutamate mutase epsilon subunit GO:0019670|GO:0050097 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 YH65_04370 ef8ae24467d1daeb0e951fb6dcba72cc 453 Pfam PF06368 Methylaspartate mutase E chain (MutE) 41 434 7.4E-118 T 11-10-2018 IPR006396 Glutamate mutase epsilon subunit GO:0019670|GO:0050097 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 YH65_04370 ef8ae24467d1daeb0e951fb6dcba72cc 453 Gene3D G3DSA:3.20.20.240 2 400 7.9E-130 T 11-10-2018 YH65_08185 e3539a05a40e1e8a72a7681eb855a2f0 169 Gene3D G3DSA:1.25.40.10 1 167 1.2E-48 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YH65_08185 e3539a05a40e1e8a72a7681eb855a2f0 169 Pfam PF08238 Sel1 repeat 87 117 1.3E-4 T 11-10-2018 IPR006597 Sel1-like repeat YH65_08185 e3539a05a40e1e8a72a7681eb855a2f0 169 Pfam PF08238 Sel1 repeat 122 156 2.1E-6 T 11-10-2018 IPR006597 Sel1-like repeat YH65_08185 e3539a05a40e1e8a72a7681eb855a2f0 169 Pfam PF08238 Sel1 repeat 15 47 0.93 T 11-10-2018 IPR006597 Sel1-like repeat YH65_08185 e3539a05a40e1e8a72a7681eb855a2f0 169 Pfam PF08238 Sel1 repeat 51 81 1.4E-7 T 11-10-2018 IPR006597 Sel1-like repeat YH65_08185 e3539a05a40e1e8a72a7681eb855a2f0 169 SMART SM00671 13 48 0.012 T 11-10-2018 IPR006597 Sel1-like repeat YH65_08185 e3539a05a40e1e8a72a7681eb855a2f0 169 SMART SM00671 121 156 2.7E-9 T 11-10-2018 IPR006597 Sel1-like repeat YH65_08185 e3539a05a40e1e8a72a7681eb855a2f0 169 SMART SM00671 49 84 1.1E-8 T 11-10-2018 IPR006597 Sel1-like repeat YH65_08185 e3539a05a40e1e8a72a7681eb855a2f0 169 SMART SM00671 85 120 5.3E-10 T 11-10-2018 IPR006597 Sel1-like repeat YH65_08185 e3539a05a40e1e8a72a7681eb855a2f0 169 SUPERFAMILY SSF81901 3 164 1.48E-39 T 11-10-2018 YH65_09900 64c3cd2c4cd61acbef168d651af1f77e 703 SUPERFAMILY SSF53706 9 556 1.26E-134 T 11-10-2018 YH65_09900 64c3cd2c4cd61acbef168d651af1f77e 703 SMART SM00926 7 61 3.3E-14 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_09900 64c3cd2c4cd61acbef168d651af1f77e 703 Gene3D G3DSA:2.40.40.20 582 696 1.6E-14 T 11-10-2018 YH65_09900 64c3cd2c4cd61acbef168d651af1f77e 703 Gene3D G3DSA:3.40.50.740 99 538 3.4E-117 T 11-10-2018 YH65_09900 64c3cd2c4cd61acbef168d651af1f77e 703 Gene3D G3DSA:2.20.25.90 8 61 2.4E-15 T 11-10-2018 YH65_09900 64c3cd2c4cd61acbef168d651af1f77e 703 Pfam PF00384 Molybdopterin oxidoreductase 102 489 1.7E-41 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_09900 64c3cd2c4cd61acbef168d651af1f77e 703 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 10 60 4.8E-15 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_09900 64c3cd2c4cd61acbef168d651af1f77e 703 SUPERFAMILY SSF50692 587 699 3.59E-15 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily YH65_09900 64c3cd2c4cd61acbef168d651af1f77e 703 Pfam PF01568 Molydopterin dinucleotide binding domain 587 689 2.7E-10 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 YH65_09900 64c3cd2c4cd61acbef168d651af1f77e 703 Gene3D G3DSA:3.40.228.10 162 364 3.4E-117 T 11-10-2018 YH65_04290 aea4ab103505e91428082eac0ef13a45 544 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 367 379 - T 11-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 YH65_04290 aea4ab103505e91428082eac0ef13a45 544 Pfam PF00069 Protein kinase domain 293 449 1.4E-22 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 YH65_04290 aea4ab103505e91428082eac0ef13a45 544 Gene3D G3DSA:3.60.40.10 2 228 4.4E-41 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 YH65_04290 aea4ab103505e91428082eac0ef13a45 544 SMART SM00332 2 223 2.1E-18 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 YH65_04290 aea4ab103505e91428082eac0ef13a45 544 SUPERFAMILY SSF81606 10 225 3.4E-42 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 YH65_04290 aea4ab103505e91428082eac0ef13a45 544 SMART SM00220 254 510 1.1E-9 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 YH65_04290 aea4ab103505e91428082eac0ef13a45 544 Gene3D G3DSA:1.10.510.10 265 508 1.5E-30 T 11-10-2018 YH65_04290 aea4ab103505e91428082eac0ef13a45 544 SMART SM00331 5 225 5.3E-13 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 YH65_04290 aea4ab103505e91428082eac0ef13a45 544 SUPERFAMILY SSF56112 265 498 4.18E-35 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily YH65_04290 aea4ab103505e91428082eac0ef13a45 544 Pfam PF13672 Protein phosphatase 2C 18 191 1.8E-19 T 11-10-2018 YH65_00065 17c6f787631788b3c7c403abee24e337 173 SUPERFAMILY SSF56420 1 172 7.59E-59 T 11-10-2018 IPR036821 Peptide deformylase superfamily YH65_00065 17c6f787631788b3c7c403abee24e337 173 Pfam PF01327 Polypeptide deformylase 3 160 1.9E-51 T 11-10-2018 IPR023635 Peptide deformylase YH65_00065 17c6f787631788b3c7c403abee24e337 173 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 3 168 1.7E-53 T 11-10-2018 IPR023635 Peptide deformylase YH65_00065 17c6f787631788b3c7c403abee24e337 173 PIRSF PIRSF004749 1 173 1.3E-53 T 11-10-2018 IPR023635 Peptide deformylase YH65_00065 17c6f787631788b3c7c403abee24e337 173 PRINTS PR01576 Peptide deformylase signature 97 108 2.2E-35 T 11-10-2018 IPR023635 Peptide deformylase YH65_00065 17c6f787631788b3c7c403abee24e337 173 PRINTS PR01576 Peptide deformylase signature 109 127 2.2E-35 T 11-10-2018 IPR023635 Peptide deformylase YH65_00065 17c6f787631788b3c7c403abee24e337 173 PRINTS PR01576 Peptide deformylase signature 32 61 2.2E-35 T 11-10-2018 IPR023635 Peptide deformylase YH65_00065 17c6f787631788b3c7c403abee24e337 173 PRINTS PR01576 Peptide deformylase signature 128 157 2.2E-35 T 11-10-2018 IPR023635 Peptide deformylase YH65_00065 17c6f787631788b3c7c403abee24e337 173 Hamap MF_00163 Peptide deformylase [def]. 1 170 28.927 T 11-10-2018 IPR023635 Peptide deformylase YH65_00065 17c6f787631788b3c7c403abee24e337 173 Gene3D G3DSA:3.90.45.10 1 167 2.5E-58 T 11-10-2018 IPR036821 Peptide deformylase superfamily YH65_01450 6537cc2e326981a1bdebbbb6dab72aa9 302 SUPERFAMILY SSF52402 6 210 7.94E-74 T 11-10-2018 YH65_01450 6537cc2e326981a1bdebbbb6dab72aa9 302 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 302 7.0E-148 T 11-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 YH65_01450 6537cc2e326981a1bdebbbb6dab72aa9 302 Gene3D G3DSA:3.40.50.620 7 212 2.4E-64 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YH65_01450 6537cc2e326981a1bdebbbb6dab72aa9 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 257 5.4E-61 T 11-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 YH65_01450 6537cc2e326981a1bdebbbb6dab72aa9 302 PIRSF PIRSF002936 1 302 4.2E-150 T 11-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 YH65_01450 6537cc2e326981a1bdebbbb6dab72aa9 302 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 4 302 53.888 T 11-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 YH65_04790 b2241c14473808dd1ebaf7537dc5e6e7 244 SMART SM00479 3 178 2.7E-19 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III YH65_04790 b2241c14473808dd1ebaf7537dc5e6e7 244 Pfam PF00929 Exonuclease 5 142 5.4E-19 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III YH65_04790 b2241c14473808dd1ebaf7537dc5e6e7 244 SUPERFAMILY SSF53098 1 232 1.06E-33 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily YH65_04790 b2241c14473808dd1ebaf7537dc5e6e7 244 Gene3D G3DSA:3.30.420.10 4 189 2.6E-33 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 YH65_10940 c3b82b9c779e66a07750e3fa30ec2af3 379 Pfam PF13584 Oxygen tolerance 23 268 1.1E-18 T 11-10-2018 IPR025738 Aerotolerance-related protein BatD YH65_07100 d40402c843843f08af35337ff412fafd 384 SUPERFAMILY SSF53756 42 381 4.03E-31 T 11-10-2018 YH65_07100 d40402c843843f08af35337ff412fafd 384 Gene3D G3DSA:3.40.50.2000 194 368 3.1E-17 T 11-10-2018 YH65_07100 d40402c843843f08af35337ff412fafd 384 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 90 96 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 YH65_07100 d40402c843843f08af35337ff412fafd 384 Pfam PF00534 Glycosyl transferases group 1 199 361 2.3E-11 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 YH65_07100 d40402c843843f08af35337ff412fafd 384 Gene3D G3DSA:3.40.50.2000 16 193 1.6E-9 T 11-10-2018 YH65_04310 5a06d5931226b133ecd8a04f0666bad2 408 Pfam PF02687 FtsX-like permease family 301 401 1.7E-14 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 YH65_04310 5a06d5931226b133ecd8a04f0666bad2 408 Pfam PF12704 MacB-like periplasmic core domain 37 215 4.0E-6 T 11-10-2018 IPR025857 MacB-like periplasmic core domain YH65_04150 c798ca2cfea0f1cbfdce50869deae52a 344 Pfam PF01987 Mitochondrial biogenesis AIM24 82 302 4.9E-63 T 11-10-2018 IPR002838 Mitochondrial biogenesis protein AIM24 YH65_04150 c798ca2cfea0f1cbfdce50869deae52a 344 SUPERFAMILY SSF51219 80 322 6.28E-78 T 11-10-2018 IPR016031 Tryptophan RNA-binding attenuator protein-like domain superfamily YH65_04150 c798ca2cfea0f1cbfdce50869deae52a 344 Gene3D G3DSA:3.60.160.10 74 327 2.2E-95 T 11-10-2018 IPR036983 Mitochondrial biogenesis AIM24 superfamily YH65_09410 42992616e6a71bcfd01c30206b797d78 707 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 53 589 1.6E-174 T 11-10-2018 YH65_09410 42992616e6a71bcfd01c30206b797d78 707 SUPERFAMILY SSF56601 199 616 1.13E-111 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like YH65_09410 42992616e6a71bcfd01c30206b797d78 707 Pfam PF00905 Penicillin binding protein transpeptidase domain 312 580 2.8E-34 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 YH65_09410 42992616e6a71bcfd01c30206b797d78 707 Gene3D G3DSA:3.40.710.10 237 640 7.4E-110 T 11-10-2018 YH65_09410 42992616e6a71bcfd01c30206b797d78 707 Gene3D G3DSA:1.10.3810.10 35 234 2.0E-71 T 11-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 YH65_09410 42992616e6a71bcfd01c30206b797d78 707 SUPERFAMILY SSF53955 29 242 5.06E-72 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily YH65_09410 42992616e6a71bcfd01c30206b797d78 707 Pfam PF00912 Transglycosylase 46 218 3.0E-60 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 YH65_01815 5fbdcf53db16c36b904fd4d1463f8ab7 225 Pfam PF01694 Rhomboid family 52 194 7.9E-37 T 11-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 YH65_01815 5fbdcf53db16c36b904fd4d1463f8ab7 225 SUPERFAMILY SSF144091 4 194 9.02E-45 T 11-10-2018 YH65_01815 5fbdcf53db16c36b904fd4d1463f8ab7 225 Gene3D G3DSA:1.20.1540.10 2 200 4.2E-42 T 11-10-2018 IPR035952 Rhomboid-like superfamily YH65_03355 7db3951669ff289b827bdb459389fa1c 460 Gene3D G3DSA:3.10.450.350 294 335 4.6E-18 T 11-10-2018 YH65_03355 7db3951669ff289b827bdb459389fa1c 460 SUPERFAMILY SSF51261 291 458 3.5E-23 T 11-10-2018 IPR011055 Duplicated hybrid motif YH65_03355 7db3951669ff289b827bdb459389fa1c 460 Gene3D G3DSA:2.70.70.10 336 459 4.6E-18 T 11-10-2018 IPR011055 Duplicated hybrid motif YH65_03355 7db3951669ff289b827bdb459389fa1c 460 Pfam PF01551 Peptidase family M23 365 454 3.1E-14 T 11-10-2018 IPR016047 Peptidase M23 YH65_05660 dee10e9be72b2319b7a63dd2707fa634 235 Gene3D G3DSA:3.10.200.10 10 234 2.1E-83 T 11-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily YH65_05660 dee10e9be72b2319b7a63dd2707fa634 235 SUPERFAMILY SSF51069 13 232 1.26E-76 T 11-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily YH65_05660 dee10e9be72b2319b7a63dd2707fa634 235 Pfam PF00194 Eukaryotic-type carbonic anhydrase 13 233 3.3E-51 T 11-10-2018 IPR001148 Alpha carbonic anhydrase domain YH65_05660 dee10e9be72b2319b7a63dd2707fa634 235 SMART SM01057 14 233 2.0E-105 T 11-10-2018 IPR001148 Alpha carbonic anhydrase domain YH65_05660 dee10e9be72b2319b7a63dd2707fa634 235 ProSitePatterns PS00162 Alpha-carbonic anhydrases signature. 104 120 - T 11-10-2018 IPR018338 Carbonic anhydrase, alpha-class, conserved site GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117|Reactome: R-HSA-1475029 YH65_00005 4d79369edf19ba5da0f43b14b1c675bd 442 Gene3D G3DSA:3.40.50.300 86 266 2.5E-57 T 11-10-2018 YH65_00005 4d79369edf19ba5da0f43b14b1c675bd 442 Gene3D G3DSA:3.30.300.180 1 85 3.8E-17 T 11-10-2018 IPR038454 DnaA, N-terminal domain superfamily YH65_00005 4d79369edf19ba5da0f43b14b1c675bd 442 SMART SM00382 136 262 2.3E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain YH65_00005 4d79369edf19ba5da0f43b14b1c675bd 442 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 199 213 4.8E-43 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like YH65_00005 4d79369edf19ba5da0f43b14b1c675bd 442 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 233 260 4.8E-43 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like YH65_00005 4d79369edf19ba5da0f43b14b1c675bd 442 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 167 181 4.8E-43 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like YH65_00005 4d79369edf19ba5da0f43b14b1c675bd 442 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 395 414 4.8E-43 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like YH65_00005 4d79369edf19ba5da0f43b14b1c675bd 442 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 137 157 4.8E-43 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like YH65_00005 4d79369edf19ba5da0f43b14b1c675bd 442 Pfam PF00308 Bacterial dnaA protein 104 318 1.9E-86 T 11-10-2018 IPR013317 Chromosomal replication initiator protein DnaA YH65_00005 4d79369edf19ba5da0f43b14b1c675bd 442 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 346 414 6.7E-25 T 11-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 YH65_00005 4d79369edf19ba5da0f43b14b1c675bd 442 SUPERFAMILY SSF52540 104 311 8.61E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_00005 4d79369edf19ba5da0f43b14b1c675bd 442 Gene3D G3DSA:1.10.1750.10 337 439 9.4E-30 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 YH65_00005 4d79369edf19ba5da0f43b14b1c675bd 442 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 5 435 3.2E-155 T 11-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 YH65_00005 4d79369edf19ba5da0f43b14b1c675bd 442 Pfam PF11638 DnaA N-terminal domain 5 65 2.5E-8 T 11-10-2018 IPR024633 DnaA N-terminal domain YH65_00005 4d79369edf19ba5da0f43b14b1c675bd 442 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 1 436 30.889 T 11-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 YH65_00005 4d79369edf19ba5da0f43b14b1c675bd 442 SUPERFAMILY SSF48295 334 436 1.52E-31 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 YH65_00005 4d79369edf19ba5da0f43b14b1c675bd 442 SMART SM00760 345 414 6.3E-33 T 11-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 YH65_00005 4d79369edf19ba5da0f43b14b1c675bd 442 ProSitePatterns PS01008 DnaA protein signature. 395 414 - T 11-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 YH65_00005 4d79369edf19ba5da0f43b14b1c675bd 442 Gene3D G3DSA:1.10.8.60 268 336 9.2E-23 T 11-10-2018 YH65_07605 fcdb54b3dab7645e5c9a9f493c4153ee 423 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 40 63 - T 11-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 YH65_07605 fcdb54b3dab7645e5c9a9f493c4153ee 423 Gene3D G3DSA:3.30.830.10 2 225 1.6E-82 T 11-10-2018 YH65_07605 fcdb54b3dab7645e5c9a9f493c4153ee 423 SUPERFAMILY SSF63411 233 419 1.08E-33 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 YH65_07605 fcdb54b3dab7645e5c9a9f493c4153ee 423 Pfam PF05193 Peptidase M16 inactive domain 174 350 8.1E-32 T 11-10-2018 IPR007863 Peptidase M16, C-terminal YH65_07605 fcdb54b3dab7645e5c9a9f493c4153ee 423 Gene3D G3DSA:3.30.830.10 228 416 1.2E-49 T 11-10-2018 YH65_07605 fcdb54b3dab7645e5c9a9f493c4153ee 423 Pfam PF00675 Insulinase (Peptidase family M16) 32 135 5.0E-23 T 11-10-2018 IPR011765 Peptidase M16, N-terminal YH65_07605 fcdb54b3dab7645e5c9a9f493c4153ee 423 SUPERFAMILY SSF63411 5 213 1.62E-58 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 YH65_06325 e01c1bb8950c404b38976514904dcc7a 417 Gene3D G3DSA:1.20.1600.10 13 416 1.2E-68 T 11-10-2018 YH65_06325 e01c1bb8950c404b38976514904dcc7a 417 Pfam PF02321 Outer membrane efflux protein 27 214 1.0E-25 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 YH65_06325 e01c1bb8950c404b38976514904dcc7a 417 Pfam PF02321 Outer membrane efflux protein 239 415 3.1E-21 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 YH65_06325 e01c1bb8950c404b38976514904dcc7a 417 SUPERFAMILY SSF56954 4 415 7.06E-68 T 11-10-2018 YH65_04365 c7e68310baf2b5b0e46299f33ae71d21 134 Pfam PF02310 B12 binding domain 1 89 2.8E-10 T 11-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 YH65_04365 c7e68310baf2b5b0e46299f33ae71d21 134 Gene3D G3DSA:3.40.50.280 1 130 2.4E-25 T 11-10-2018 YH65_04365 c7e68310baf2b5b0e46299f33ae71d21 134 SUPERFAMILY SSF52242 1 116 1.01E-25 T 11-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 YH65_01225 fe67ad19af51e58e7638fae521d98abf 123 PRINTS PR01034 Ribosomal protein S12 signature 94 110 9.6E-58 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YH65_01225 fe67ad19af51e58e7638fae521d98abf 123 PRINTS PR01034 Ribosomal protein S12 signature 77 94 9.6E-58 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YH65_01225 fe67ad19af51e58e7638fae521d98abf 123 PRINTS PR01034 Ribosomal protein S12 signature 27 42 9.6E-58 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YH65_01225 fe67ad19af51e58e7638fae521d98abf 123 PRINTS PR01034 Ribosomal protein S12 signature 110 122 9.6E-58 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YH65_01225 fe67ad19af51e58e7638fae521d98abf 123 PRINTS PR01034 Ribosomal protein S12 signature 42 57 9.6E-58 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YH65_01225 fe67ad19af51e58e7638fae521d98abf 123 PRINTS PR01034 Ribosomal protein S12 signature 58 77 9.6E-58 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YH65_01225 fe67ad19af51e58e7638fae521d98abf 123 PIRSF PIRSF002133 1 123 1.8E-53 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YH65_01225 fe67ad19af51e58e7638fae521d98abf 123 SUPERFAMILY SSF50249 2 123 1.03E-49 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold YH65_01225 fe67ad19af51e58e7638fae521d98abf 123 Pfam PF00164 Ribosomal protein S12/S23 12 123 4.0E-40 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YH65_01225 fe67ad19af51e58e7638fae521d98abf 123 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.422 T 11-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_01225 fe67ad19af51e58e7638fae521d98abf 123 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 2 123 4.1E-68 T 11-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_01225 fe67ad19af51e58e7638fae521d98abf 123 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YH65_01225 fe67ad19af51e58e7638fae521d98abf 123 Gene3D G3DSA:2.40.50.140 1 123 6.4E-61 T 11-10-2018 YH65_03835 5fcdda6e14518c71dc9e9b73a0692295 222 Pfam PF06508 Queuosine biosynthesis protein QueC 4 210 7.2E-77 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 YH65_03835 5fcdda6e14518c71dc9e9b73a0692295 222 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 3 218 53.624 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 YH65_03835 5fcdda6e14518c71dc9e9b73a0692295 222 PIRSF PIRSF006293 1 222 3.4E-82 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 YH65_03835 5fcdda6e14518c71dc9e9b73a0692295 222 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 5 205 2.1E-64 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 YH65_03835 5fcdda6e14518c71dc9e9b73a0692295 222 SUPERFAMILY SSF52402 3 220 1.08E-63 T 11-10-2018 YH65_03835 5fcdda6e14518c71dc9e9b73a0692295 222 Gene3D G3DSA:3.40.50.620 2 217 2.0E-75 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YH65_07185 0ac0cf896d3ce1eebe3367b76eced4ad 446 Gene3D G3DSA:1.20.120.430 120 446 1.0E-91 T 11-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 YH65_07185 0ac0cf896d3ce1eebe3367b76eced4ad 446 Pfam PF01926 50S ribosome-binding GTPase 216 332 1.2E-26 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 YH65_07185 0ac0cf896d3ce1eebe3367b76eced4ad 446 Pfam PF12631 MnmE helical domain 121 443 1.9E-42 T 11-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 YH65_07185 0ac0cf896d3ce1eebe3367b76eced4ad 446 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 284 302 3.6E-6 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 YH65_07185 0ac0cf896d3ce1eebe3367b76eced4ad 446 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 217 237 3.6E-6 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 YH65_07185 0ac0cf896d3ce1eebe3367b76eced4ad 446 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 9 446 9.4E-124 T 11-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 YH65_07185 0ac0cf896d3ce1eebe3367b76eced4ad 446 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 3 446 31.581 T 11-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 YH65_07185 0ac0cf896d3ce1eebe3367b76eced4ad 446 Pfam PF10396 GTP-binding protein TrmE N-terminus 4 118 2.4E-39 T 11-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 YH65_07185 0ac0cf896d3ce1eebe3367b76eced4ad 446 Gene3D G3DSA:3.40.50.300 215 375 1.0E-91 T 11-10-2018 YH65_07185 0ac0cf896d3ce1eebe3367b76eced4ad 446 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 214 346 3.7E-26 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 YH65_07185 0ac0cf896d3ce1eebe3367b76eced4ad 446 Gene3D G3DSA:3.30.1360.120 1 119 1.1E-41 T 11-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 YH65_07185 0ac0cf896d3ce1eebe3367b76eced4ad 446 SUPERFAMILY SSF52540 71 357 2.71E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_04715 e44814ce0599b858113cde53bb41d4b5 644 SUPERFAMILY SSF56519 39 237 9.29E-36 T 11-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 YH65_04715 e44814ce0599b858113cde53bb41d4b5 644 Gene3D G3DSA:3.30.1390.30 67 151 4.4E-32 T 11-10-2018 YH65_04715 e44814ce0599b858113cde53bb41d4b5 644 Gene3D G3DSA:3.40.710.10 238 597 5.5E-83 T 11-10-2018 YH65_04715 e44814ce0599b858113cde53bb41d4b5 644 Gene3D G3DSA:3.90.1310.10 46 231 4.4E-32 T 11-10-2018 YH65_04715 e44814ce0599b858113cde53bb41d4b5 644 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 2 592 1.5E-174 T 11-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 YH65_04715 e44814ce0599b858113cde53bb41d4b5 644 Pfam PF00905 Penicillin binding protein transpeptidase domain 258 588 4.0E-54 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 YH65_04715 e44814ce0599b858113cde53bb41d4b5 644 SUPERFAMILY SSF56601 239 594 4.91E-84 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like YH65_04715 e44814ce0599b858113cde53bb41d4b5 644 Pfam PF03717 Penicillin-binding Protein dimerisation domain 46 224 1.6E-31 T 11-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 YH65_09365 a94993b781ae8facafd26ba3f707092a 242 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 221 3.5E-42 T 11-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 YH65_09365 a94993b781ae8facafd26ba3f707092a 242 SUPERFAMILY SSF102705 1 222 9.55E-56 T 11-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily YH65_09365 a94993b781ae8facafd26ba3f707092a 242 Gene3D G3DSA:3.40.1390.30 4 215 6.6E-49 T 11-10-2018 YH65_09365 a94993b781ae8facafd26ba3f707092a 242 Gene3D G3DSA:3.40.1390.30 98 205 6.6E-49 T 11-10-2018 YH65_09365 a94993b781ae8facafd26ba3f707092a 242 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 5 222 3.3E-52 T 11-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 YH65_06310 d781ccd2bc8452ec8c37d28f901336d5 237 SUPERFAMILY SSF52540 6 231 3.22E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_06310 d781ccd2bc8452ec8c37d28f901336d5 237 Pfam PF00005 ABC transporter 27 176 1.8E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YH65_06310 d781ccd2bc8452ec8c37d28f901336d5 237 SMART SM00382 34 230 6.3E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain YH65_06310 d781ccd2bc8452ec8c37d28f901336d5 237 Gene3D G3DSA:3.40.50.300 3 235 3.6E-61 T 11-10-2018 YH65_03100 e92b06d59b3d08636ee12bcde424d5a7 160 Pfam PF02464 Competence-damaged protein 7 157 5.6E-57 T 11-10-2018 IPR008136 CinA, C-terminal YH65_03100 e92b06d59b3d08636ee12bcde424d5a7 160 Gene3D G3DSA:3.90.950.20 1 160 7.0E-59 T 11-10-2018 IPR036653 CinA-like, C-terminal YH65_03100 e92b06d59b3d08636ee12bcde424d5a7 160 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 12 155 1.8E-46 T 11-10-2018 IPR008136 CinA, C-terminal YH65_03100 e92b06d59b3d08636ee12bcde424d5a7 160 SUPERFAMILY SSF142433 3 157 4.45E-53 T 11-10-2018 IPR036653 CinA-like, C-terminal YH65_07140 2f13cdfa51f587a4ec15bfd074603f3e 770 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 557 761 2.0E-55 T 11-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 YH65_07140 2f13cdfa51f587a4ec15bfd074603f3e 770 Pfam PF13614 AAA domain 576 725 1.2E-16 T 11-10-2018 IPR025669 AAA domain YH65_07140 2f13cdfa51f587a4ec15bfd074603f3e 770 Pfam PF13807 G-rich domain on putative tyrosine kinase 438 511 2.4E-20 T 11-10-2018 IPR032807 Tyrosine kinase, G-rich domain YH65_07140 2f13cdfa51f587a4ec15bfd074603f3e 770 Gene3D G3DSA:3.40.50.300 505 769 2.1E-78 T 11-10-2018 YH65_07140 2f13cdfa51f587a4ec15bfd074603f3e 770 SUPERFAMILY SSF52540 576 756 2.75E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_07140 2f13cdfa51f587a4ec15bfd074603f3e 770 Pfam PF02706 Chain length determinant protein 9 102 1.3E-12 T 11-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 YH65_09550 650d74f65e4a47cf20a63166fa64d1b3 204 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 22 114 9.0E-23 T 11-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB YH65_09550 650d74f65e4a47cf20a63166fa64d1b3 204 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 150 182 1.7E-8 T 11-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB YH65_09550 650d74f65e4a47cf20a63166fa64d1b3 204 SUPERFAMILY SSF48695 56 117 5.15E-18 T 11-10-2018 IPR036280 Multiheme cytochrome superfamily YH65_09550 650d74f65e4a47cf20a63166fa64d1b3 204 Gene3D G3DSA:1.10.1130.10 66 127 4.0E-20 T 11-10-2018 YH65_09550 650d74f65e4a47cf20a63166fa64d1b3 204 SUPERFAMILY SSF48695 153 182 1.95E-6 T 11-10-2018 IPR036280 Multiheme cytochrome superfamily YH65_00165 0d66321c9828e6b0a802ead24b187a0d 203 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 23 7.9E-5 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site YH65_00165 0d66321c9828e6b0a802ead24b187a0d 203 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 3.4E-6 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site YH65_05215 dcb72a10f8de880925ca16862c0a057b 131 Pfam PF00581 Rhodanese-like domain 32 116 5.7E-5 T 11-10-2018 IPR001763 Rhodanese-like domain YH65_05215 dcb72a10f8de880925ca16862c0a057b 131 Gene3D G3DSA:3.40.250.10 24 128 1.4E-13 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily YH65_05215 dcb72a10f8de880925ca16862c0a057b 131 SMART SM00450 25 127 5.4E-4 T 11-10-2018 IPR001763 Rhodanese-like domain YH65_05215 dcb72a10f8de880925ca16862c0a057b 131 SUPERFAMILY SSF52821 23 120 4.06E-15 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily YH65_10815 1e677cb6f7f0fd86679af700b7028f8d 84 Pfam PF12728 Helix-turn-helix domain 28 78 1.7E-7 T 11-10-2018 YH65_02960 7c8dc15d29dbbf3d977a52d46f19003b 159 Gene3D G3DSA:3.30.70.260 6 84 4.6E-28 T 11-10-2018 YH65_02960 7c8dc15d29dbbf3d977a52d46f19003b 159 Pfam PF10369 Small subunit of acetolactate synthase 88 159 1.1E-16 T 11-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 YH65_02960 7c8dc15d29dbbf3d977a52d46f19003b 159 Gene3D G3DSA:3.30.70.1150 87 159 1.1E-13 T 11-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal YH65_02960 7c8dc15d29dbbf3d977a52d46f19003b 159 SUPERFAMILY SSF55021 81 159 4.58E-18 T 11-10-2018 YH65_02960 7c8dc15d29dbbf3d977a52d46f19003b 159 Pfam PF13710 ACT domain 19 79 4.3E-10 T 11-10-2018 YH65_02960 7c8dc15d29dbbf3d977a52d46f19003b 159 SUPERFAMILY SSF55021 8 81 4.23E-18 T 11-10-2018 YH65_02960 7c8dc15d29dbbf3d977a52d46f19003b 159 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 8 159 1.4E-42 T 11-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 YH65_02960 7c8dc15d29dbbf3d977a52d46f19003b 159 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 11 81 2.0E-23 T 11-10-2018 YH65_10995 9fc68ba31c4dd9ea2d7e092863cc3ec1 562 Gene3D G3DSA:3.50.30.80 381 531 1.0E-50 T 11-10-2018 YH65_10995 9fc68ba31c4dd9ea2d7e092863cc3ec1 562 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 468 479 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 YH65_10995 9fc68ba31c4dd9ea2d7e092863cc3ec1 562 Pfam PF00920 Dehydratase family 31 557 2.9E-210 T 11-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 YH65_10995 9fc68ba31c4dd9ea2d7e092863cc3ec1 562 SUPERFAMILY SSF52016 381 560 2.12E-56 T 11-10-2018 YH65_10995 9fc68ba31c4dd9ea2d7e092863cc3ec1 562 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 14 560 8.6E-229 T 11-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 YH65_10995 9fc68ba31c4dd9ea2d7e092863cc3ec1 562 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 1 560 44.669 T 11-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 YH65_10995 9fc68ba31c4dd9ea2d7e092863cc3ec1 562 SUPERFAMILY SSF143975 1 380 7.59E-130 T 11-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 YH65_10995 9fc68ba31c4dd9ea2d7e092863cc3ec1 562 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 119 129 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 YH65_10305 7acb36904c6abad3fcdc2eda179b3cdb 390 SUPERFAMILY SSF51905 2 323 2.63E-31 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_10305 7acb36904c6abad3fcdc2eda179b3cdb 390 Gene3D G3DSA:3.50.50.100 1 385 9.6E-85 T 11-10-2018 YH65_10305 7acb36904c6abad3fcdc2eda179b3cdb 390 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 269 291 1.1E-6 T 11-10-2018 YH65_10305 7acb36904c6abad3fcdc2eda179b3cdb 390 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 96 114 1.1E-6 T 11-10-2018 YH65_10305 7acb36904c6abad3fcdc2eda179b3cdb 390 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 1.1E-6 T 11-10-2018 YH65_10305 7acb36904c6abad3fcdc2eda179b3cdb 390 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 304 6.6E-26 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YH65_10305 7acb36904c6abad3fcdc2eda179b3cdb 390 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 97 105 5.8E-7 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 YH65_10305 7acb36904c6abad3fcdc2eda179b3cdb 390 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 279 297 5.8E-7 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 YH65_10305 7acb36904c6abad3fcdc2eda179b3cdb 390 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 3 25 5.8E-7 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 YH65_07765 0a5347fbb420fbc39ba36cea86038a63 130 Gene3D G3DSA:1.10.760.10 23 109 2.2E-16 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_07765 0a5347fbb420fbc39ba36cea86038a63 130 SUPERFAMILY SSF46626 15 110 6.11E-15 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_07765 0a5347fbb420fbc39ba36cea86038a63 130 Pfam PF00034 Cytochrome c 25 108 4.1E-10 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YH65_02630 1cb979f4ab2d5db94c6851fba37f844a 620 Hamap MF_00505 Chaperone protein HtpG [htpG]. 1 617 29.268 T 11-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 YH65_02630 1cb979f4ab2d5db94c6851fba37f844a 620 Gene3D G3DSA:3.30.230.80 248 396 2.4E-56 T 11-10-2018 YH65_02630 1cb979f4ab2d5db94c6851fba37f844a 620 Gene3D G3DSA:3.40.50.11260 397 483 8.7E-21 T 11-10-2018 YH65_02630 1cb979f4ab2d5db94c6851fba37f844a 620 PIRSF PIRSF002583 1 620 1.1E-195 T 11-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 YH65_02630 1cb979f4ab2d5db94c6851fba37f844a 620 SUPERFAMILY SSF54211 233 482 3.26E-79 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold YH65_02630 1cb979f4ab2d5db94c6851fba37f844a 620 SUPERFAMILY SSF55874 2 209 8.12E-66 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YH65_02630 1cb979f4ab2d5db94c6851fba37f844a 620 Gene3D G3DSA:1.20.120.790 486 617 9.9E-39 T 11-10-2018 IPR037196 HSP90, C-terminal domain YH65_02630 1cb979f4ab2d5db94c6851fba37f844a 620 Pfam PF00183 Hsp90 protein 209 618 1.6E-108 T 11-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 YH65_02630 1cb979f4ab2d5db94c6851fba37f844a 620 Gene3D G3DSA:3.30.565.10 3 207 1.6E-80 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YH65_02630 1cb979f4ab2d5db94c6851fba37f844a 620 SMART SM00387 24 179 5.7E-11 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YH65_02630 1cb979f4ab2d5db94c6851fba37f844a 620 Gene3D G3DSA:3.30.70.2140 208 229 1.6E-80 T 11-10-2018 YH65_02630 1cb979f4ab2d5db94c6851fba37f844a 620 PRINTS PR00775 90kDa heat shock protein signature 117 139 2.5E-61 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal YH65_02630 1cb979f4ab2d5db94c6851fba37f844a 620 PRINTS PR00775 90kDa heat shock protein signature 2 22 2.5E-61 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal YH65_02630 1cb979f4ab2d5db94c6851fba37f844a 620 PRINTS PR00775 90kDa heat shock protein signature 72 89 2.5E-61 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal YH65_02630 1cb979f4ab2d5db94c6851fba37f844a 620 PRINTS PR00775 90kDa heat shock protein signature 90 107 2.5E-61 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal YH65_02630 1cb979f4ab2d5db94c6851fba37f844a 620 PRINTS PR00775 90kDa heat shock protein signature 167 184 2.5E-61 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal YH65_02630 1cb979f4ab2d5db94c6851fba37f844a 620 PRINTS PR00775 90kDa heat shock protein signature 185 203 2.5E-61 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal YH65_02630 1cb979f4ab2d5db94c6851fba37f844a 620 PRINTS PR00775 90kDa heat shock protein signature 23 45 2.5E-61 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal YH65_02630 1cb979f4ab2d5db94c6851fba37f844a 620 SUPERFAMILY SSF110942 504 615 2.75E-29 T 11-10-2018 IPR037196 HSP90, C-terminal domain YH65_02630 1cb979f4ab2d5db94c6851fba37f844a 620 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 22 165 4.0E-15 T 11-10-2018 YH65_04750 28c262e7df45574ce19816e634532493 328 Pfam PF01814 Hemerythrin HHE cation binding domain 20 138 9.6E-12 T 11-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 YH65_04750 28c262e7df45574ce19816e634532493 328 Gene3D G3DSA:3.30.450.20 220 324 2.1E-5 T 11-10-2018 YH65_04750 28c262e7df45574ce19816e634532493 328 SUPERFAMILY SSF55785 207 305 4.0E-9 T 11-10-2018 IPR035965 PAS domain superfamily YH65_04750 28c262e7df45574ce19816e634532493 328 Pfam PF13596 PAS domain 208 312 5.9E-25 T 11-10-2018 YH65_04750 28c262e7df45574ce19816e634532493 328 Gene3D G3DSA:1.20.120.520 14 219 1.3E-47 T 11-10-2018 YH65_04205 05e947e4fd30df3fbb592b9fbd031cbc 197 Gene3D G3DSA:3.40.50.300 1 193 2.5E-48 T 11-10-2018 YH65_04205 05e947e4fd30df3fbb592b9fbd031cbc 197 SUPERFAMILY SSF52540 3 195 7.1E-34 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_04205 05e947e4fd30df3fbb592b9fbd031cbc 197 Pfam PF00406 Adenylate kinase 7 171 1.8E-33 T 11-10-2018 YH65_04205 05e947e4fd30df3fbb592b9fbd031cbc 197 Hamap MF_00235 Adenylate kinase [adk]. 3 194 34.458 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 YH65_04205 05e947e4fd30df3fbb592b9fbd031cbc 197 ProSitePatterns PS00113 Adenylate kinase signature. 84 95 - T 11-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 YH65_04205 05e947e4fd30df3fbb592b9fbd031cbc 197 PRINTS PR00094 Adenylate kinase signature 36 50 1.2E-22 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 YH65_04205 05e947e4fd30df3fbb592b9fbd031cbc 197 PRINTS PR00094 Adenylate kinase signature 84 100 1.2E-22 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 YH65_04205 05e947e4fd30df3fbb592b9fbd031cbc 197 PRINTS PR00094 Adenylate kinase signature 141 156 1.2E-22 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 YH65_04205 05e947e4fd30df3fbb592b9fbd031cbc 197 PRINTS PR00094 Adenylate kinase signature 6 19 1.2E-22 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 YH65_03460 8eb63bc1fbdcb0ac24478c4e0c9fcfad 373 Pfam PF01266 FAD dependent oxidoreductase 7 347 1.0E-34 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 YH65_03460 8eb63bc1fbdcb0ac24478c4e0c9fcfad 373 Gene3D G3DSA:3.50.50.60 8 352 1.3E-55 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_03460 8eb63bc1fbdcb0ac24478c4e0c9fcfad 373 Gene3D G3DSA:3.30.9.10 86 288 1.3E-55 T 11-10-2018 YH65_03460 8eb63bc1fbdcb0ac24478c4e0c9fcfad 373 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 8 352 6.4E-56 T 11-10-2018 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 YH65_03460 8eb63bc1fbdcb0ac24478c4e0c9fcfad 373 SUPERFAMILY SSF51905 3 205 5.05E-26 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_04835 36843313d5e54564dbaaeb331afed84e 1143 Pfam PF13395 HNH endonuclease 589 642 6.0E-12 T 11-10-2018 IPR003615 HNH nuclease YH65_04835 36843313d5e54564dbaaeb331afed84e 1143 TIGRFAM TIGR01865 cas_Csn1: CRISPR subtype II RNA-guided endonuclease Cas9 4 774 2.7E-54 T 11-10-2018 IPR028629 CRISPR-associated endonuclease Cas9 GO:0004519 YH65_04835 36843313d5e54564dbaaeb331afed84e 1143 Hamap MF_01480 CRISPR-associated endonuclease Cas9 [cas9]. 2 1130 11.463 T 11-10-2018 IPR028629 CRISPR-associated endonuclease Cas9 GO:0004519 YH65_04835 36843313d5e54564dbaaeb331afed84e 1143 Gene3D G3DSA:3.30.40.60 540 697 8.8E-7 T 11-10-2018 YH65_03230 83a0202519e93003e1280c2178608a45 128 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 2 123 18.391 T 11-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YH65_03230 83a0202519e93003e1280c2178608a45 128 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 4 83 3.1E-24 T 11-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YH65_03230 83a0202519e93003e1280c2178608a45 128 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 4 122 1.2E-31 T 11-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YH65_03230 83a0202519e93003e1280c2178608a45 128 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 11 89 6.0E-18 T 11-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YH65_03230 83a0202519e93003e1280c2178608a45 128 SUPERFAMILY SSF51344 3 84 8.24E-22 T 11-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YH65_03230 83a0202519e93003e1280c2178608a45 128 Gene3D G3DSA:2.60.15.10 1 126 5.4E-30 T 11-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YH65_10085 b03f16de9b7372821675bb2434f341bc 465 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 261 463 7.1E-28 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YH65_10085 b03f16de9b7372821675bb2434f341bc 465 SUPERFAMILY SSF161098 246 447 8.37E-19 T 11-10-2018 IPR035906 MetI-like superfamily YH65_10085 b03f16de9b7372821675bb2434f341bc 465 Gene3D G3DSA:1.10.3720.10 229 460 4.4E-21 T 11-10-2018 IPR035906 MetI-like superfamily YH65_08085 f43a0757b20a4ec4ad537e1048b076fe 450 Pfam PF13541 Subunit ChlI of Mg-chelatase 353 427 4.0E-10 T 11-10-2018 YH65_08085 f43a0757b20a4ec4ad537e1048b076fe 450 Hamap MF_01498 DNA repair protein RadA [radA]. 21 447 41.425 T 11-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 YH65_08085 f43a0757b20a4ec4ad537e1048b076fe 450 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 447 1.5E-190 T 11-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 YH65_08085 f43a0757b20a4ec4ad537e1048b076fe 450 SUPERFAMILY SSF52540 67 286 6.46E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_08085 f43a0757b20a4ec4ad537e1048b076fe 450 PRINTS PR01874 DNA repair protein radA signature 321 344 2.9E-88 T 11-10-2018 YH65_08085 f43a0757b20a4ec4ad537e1048b076fe 450 PRINTS PR01874 DNA repair protein radA signature 125 142 2.9E-88 T 11-10-2018 YH65_08085 f43a0757b20a4ec4ad537e1048b076fe 450 PRINTS PR01874 DNA repair protein radA signature 175 199 2.9E-88 T 11-10-2018 YH65_08085 f43a0757b20a4ec4ad537e1048b076fe 450 PRINTS PR01874 DNA repair protein radA signature 249 275 2.9E-88 T 11-10-2018 YH65_08085 f43a0757b20a4ec4ad537e1048b076fe 450 PRINTS PR01874 DNA repair protein radA signature 214 242 2.9E-88 T 11-10-2018 YH65_08085 f43a0757b20a4ec4ad537e1048b076fe 450 PRINTS PR01874 DNA repair protein radA signature 83 111 2.9E-88 T 11-10-2018 YH65_08085 f43a0757b20a4ec4ad537e1048b076fe 450 PRINTS PR01874 DNA repair protein radA signature 10 34 2.9E-88 T 11-10-2018 YH65_08085 f43a0757b20a4ec4ad537e1048b076fe 450 Gene3D G3DSA:3.40.50.300 64 283 1.3E-43 T 11-10-2018 YH65_08085 f43a0757b20a4ec4ad537e1048b076fe 450 Pfam PF13481 AAA domain 82 223 2.7E-11 T 11-10-2018 YH65_08085 f43a0757b20a4ec4ad537e1048b076fe 450 Gene3D G3DSA:3.30.230.10 301 450 7.9E-17 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YH65_08085 f43a0757b20a4ec4ad537e1048b076fe 450 SUPERFAMILY SSF54211 256 449 6.45E-34 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold YH65_08085 f43a0757b20a4ec4ad537e1048b076fe 450 SMART SM00382 91 245 6.7E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain YH65_06025 8614576935193335bc458b2ea8a89b86 220 SMART SM00448 1 112 1.5E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YH65_06025 8614576935193335bc458b2ea8a89b86 220 Pfam PF00072 Response regulator receiver domain 3 112 3.8E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YH65_06025 8614576935193335bc458b2ea8a89b86 220 SUPERFAMILY SSF52172 1 179 5.27E-32 T 11-10-2018 IPR011006 CheY-like superfamily YH65_06025 8614576935193335bc458b2ea8a89b86 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 216 7.4E-10 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YH65_06025 8614576935193335bc458b2ea8a89b86 220 Gene3D G3DSA:3.40.50.2300 1 124 3.5E-29 T 11-10-2018 YH65_06025 8614576935193335bc458b2ea8a89b86 220 Gene3D G3DSA:1.10.10.10 127 219 4.4E-13 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YH65_06025 8614576935193335bc458b2ea8a89b86 220 SMART SM00862 146 216 1.6E-7 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YH65_10960 59cf09007cbd71662727e23fbad89eea 202 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 9 200 26.179 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 YH65_10960 59cf09007cbd71662727e23fbad89eea 202 Gene3D G3DSA:3.40.50.300 2 201 2.8E-60 T 11-10-2018 YH65_10960 59cf09007cbd71662727e23fbad89eea 202 Pfam PF01121 Dephospho-CoA kinase 11 182 1.1E-47 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 YH65_10960 59cf09007cbd71662727e23fbad89eea 202 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 12 188 3.4E-50 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 YH65_10960 59cf09007cbd71662727e23fbad89eea 202 SUPERFAMILY SSF52540 12 195 6.2E-30 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_09260 59fd949c85df309c62af0ea55d4f497d 286 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 2 202 1.8E-51 T 11-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 YH65_09260 59fd949c85df309c62af0ea55d4f497d 286 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 23 170 1.2E-47 T 11-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 YH65_09260 59fd949c85df309c62af0ea55d4f497d 286 SUPERFAMILY SSF55120 1 219 1.6E-61 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 YH65_09260 59fd949c85df309c62af0ea55d4f497d 286 Gene3D G3DSA:3.30.2350.10 1 219 6.7E-63 T 11-10-2018 YH65_09260 59fd949c85df309c62af0ea55d4f497d 286 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 1 271 13.32 T 11-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 YH65_07035 930bef39825566a7c13fce5f4d1f21ee 91 SUPERFAMILY SSF47598 8 49 3.28E-5 T 11-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 YH65_07035 930bef39825566a7c13fce5f4d1f21ee 91 Gene3D G3DSA:1.10.1220.10 3 80 6.3E-9 T 11-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 YH65_06475 e40154f3e3cce20ee48f589fbaadeb93 529 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 6 529 7.1E-233 T 11-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 YH65_06475 e40154f3e3cce20ee48f589fbaadeb93 529 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 251 266 - T 11-10-2018 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 YH65_06475 e40154f3e3cce20ee48f589fbaadeb93 529 PIRSF PIRSF006294 1 529 7.1E-236 T 11-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 YH65_06475 e40154f3e3cce20ee48f589fbaadeb93 529 Gene3D G3DSA:3.40.449.10 20 220 1.5E-219 T 11-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 YH65_06475 e40154f3e3cce20ee48f589fbaadeb93 529 Gene3D G3DSA:2.170.8.10 39 335 1.5E-219 T 11-10-2018 YH65_06475 e40154f3e3cce20ee48f589fbaadeb93 529 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 13 527 54.95 T 11-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 YH65_06475 e40154f3e3cce20ee48f589fbaadeb93 529 Pfam PF01293 Phosphoenolpyruvate carboxykinase 19 481 4.9E-218 T 11-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 YH65_06475 e40154f3e3cce20ee48f589fbaadeb93 529 SUPERFAMILY SSF68923 7 213 5.76E-81 T 11-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 YH65_06475 e40154f3e3cce20ee48f589fbaadeb93 529 SUPERFAMILY SSF53795 215 528 1.2E-132 T 11-10-2018 YH65_06475 e40154f3e3cce20ee48f589fbaadeb93 529 Gene3D G3DSA:3.90.228.20 221 513 1.5E-219 T 11-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 YH65_00015 894b3f1afbe96288cd63029fecb9f7ac 543 Pfam PF06418 CTP synthase N-terminus 7 269 9.4E-119 T 11-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 YH65_00015 894b3f1afbe96288cd63029fecb9f7ac 543 SUPERFAMILY SSF52317 291 542 2.12E-75 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like YH65_00015 894b3f1afbe96288cd63029fecb9f7ac 543 TIGRFAM TIGR00337 PyrG: CTP synthase 5 537 4.3E-239 T 11-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 YH65_00015 894b3f1afbe96288cd63029fecb9f7ac 543 Gene3D G3DSA:3.40.50.880 288 543 5.8E-96 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like YH65_00015 894b3f1afbe96288cd63029fecb9f7ac 543 Pfam PF00117 Glutamine amidotransferase class-I 304 535 3.0E-50 T 11-10-2018 IPR017926 Glutamine amidotransferase YH65_00015 894b3f1afbe96288cd63029fecb9f7ac 543 SUPERFAMILY SSF52540 6 269 2.57E-114 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_00015 894b3f1afbe96288cd63029fecb9f7ac 543 Hamap MF_01227 CTP synthase [pyrG]. 6 542 49.104 T 11-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 YH65_00015 894b3f1afbe96288cd63029fecb9f7ac 543 Gene3D G3DSA:3.40.50.300 1 287 1.7E-124 T 11-10-2018 YH65_01320 d2be9999b0a0215168c257e1af476ebb 315 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 196 218 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YH65_01320 d2be9999b0a0215168c257e1af476ebb 315 Gene3D G3DSA:3.40.50.720 98 287 1.9E-103 T 11-10-2018 YH65_01320 d2be9999b0a0215168c257e1af476ebb 315 SUPERFAMILY SSF52283 4 122 6.43E-30 T 11-10-2018 YH65_01320 d2be9999b0a0215168c257e1af476ebb 315 Gene3D G3DSA:3.40.50.720 16 314 1.9E-103 T 11-10-2018 YH65_01320 d2be9999b0a0215168c257e1af476ebb 315 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 225 241 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YH65_01320 d2be9999b0a0215168c257e1af476ebb 315 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 288 2.8E-47 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 YH65_01320 d2be9999b0a0215168c257e1af476ebb 315 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 15 312 1.2E-24 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 YH65_01320 d2be9999b0a0215168c257e1af476ebb 315 SUPERFAMILY SSF51735 102 289 1.66E-44 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily YH65_01330 a0dcdd55841e262d008c4d89dffedaa8 388 Hamap MF_01643 Formate-dependent phosphoribosylglycinamide formyltransferase [purT]. 7 388 47.85 T 11-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 YH65_01330 a0dcdd55841e262d008c4d89dffedaa8 388 SUPERFAMILY SSF52440 4 111 1.44E-29 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily YH65_01330 a0dcdd55841e262d008c4d89dffedaa8 388 SUPERFAMILY SSF56059 114 311 1.25E-57 T 11-10-2018 YH65_01330 a0dcdd55841e262d008c4d89dffedaa8 388 SUPERFAMILY SSF51246 321 385 2.82E-10 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 YH65_01330 a0dcdd55841e262d008c4d89dffedaa8 388 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 13 385 1.9E-158 T 11-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 YH65_01330 a0dcdd55841e262d008c4d89dffedaa8 388 Gene3D G3DSA:3.30.470.20 195 386 1.5E-56 T 11-10-2018 YH65_01330 a0dcdd55841e262d008c4d89dffedaa8 388 Gene3D G3DSA:3.40.50.20 1 121 4.6E-46 T 11-10-2018 YH65_01330 a0dcdd55841e262d008c4d89dffedaa8 388 Gene3D G3DSA:3.30.1490.20 125 194 4.1E-27 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 YH65_01330 a0dcdd55841e262d008c4d89dffedaa8 388 Pfam PF02222 ATP-grasp domain 122 292 2.6E-57 T 11-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type YH65_06550 c4cd0d35410857f1c64d71f8ab2ea701 294 SUPERFAMILY SSF56300 5 290 1.9E-35 T 11-10-2018 YH65_06550 c4cd0d35410857f1c64d71f8ab2ea701 294 Gene3D G3DSA:3.60.21.10 1 290 4.4E-24 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like YH65_06550 c4cd0d35410857f1c64d71f8ab2ea701 294 Pfam PF00149 Calcineurin-like phosphoesterase 5 241 6.3E-19 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 YH65_10955 6ea3360a5bfde90f10314d22711707d5 558 SUPERFAMILY SSF141523 321 483 4.19E-22 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like YH65_10955 6ea3360a5bfde90f10314d22711707d5 558 SUPERFAMILY SSF47090 221 303 4.94E-14 T 11-10-2018 IPR036365 PGBD-like superfamily YH65_10955 6ea3360a5bfde90f10314d22711707d5 558 Pfam PF03734 L,D-transpeptidase catalytic domain 323 490 3.4E-31 T 11-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 YH65_10955 6ea3360a5bfde90f10314d22711707d5 558 Pfam PF01471 Putative peptidoglycan binding domain 237 295 2.2E-7 T 11-10-2018 IPR002477 Peptidoglycan binding-like YH65_02165 880505a7298bb698bc182c38969036ec 419 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 2 410 25.507 T 11-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 YH65_02165 880505a7298bb698bc182c38969036ec 419 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 6 402 1.8E-129 T 11-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 YH65_02165 880505a7298bb698bc182c38969036ec 419 Pfam PF02601 Exonuclease VII, large subunit 121 389 1.1E-75 T 11-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 YH65_02165 880505a7298bb698bc182c38969036ec 419 Pfam PF13742 OB-fold nucleic acid binding domain 5 97 3.7E-29 T 11-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 YH65_08400 2a8ff9e0c68500df3961854d5de448b2 330 SUPERFAMILY SSF46589 7 89 8.37E-15 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 YH65_08400 2a8ff9e0c68500df3961854d5de448b2 330 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 34 329 9.2E-102 T 11-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 YH65_08400 2a8ff9e0c68500df3961854d5de448b2 330 Pfam PF01409 tRNA synthetases class II core domain (F) 85 329 1.4E-97 T 11-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 YH65_08400 2a8ff9e0c68500df3961854d5de448b2 330 Gene3D G3DSA:3.30.930.10 1 330 1.0E-109 T 11-10-2018 YH65_08400 2a8ff9e0c68500df3961854d5de448b2 330 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 1 329 46.887 T 11-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 YH65_08400 2a8ff9e0c68500df3961854d5de448b2 330 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 13 79 4.1E-16 T 11-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 YH65_08400 2a8ff9e0c68500df3961854d5de448b2 330 SUPERFAMILY SSF55681 85 330 1.23E-72 T 11-10-2018 YH65_08545 c3932d447b389346cc47c4c5b162788c 373 SUPERFAMILY SSF69765 213 370 1.83E-57 T 11-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 YH65_08545 c3932d447b389346cc47c4c5b162788c 373 Hamap MF_01520 Bifunctional enzyme IspD/IspF [ispDF]. 2 368 35.553 T 11-10-2018 IPR026596 Bifunctional enzyme IspD/IspF KEGG: 00900+4.6.1.12+2.7.7.60|MetaCyc: PWY-7560 YH65_08545 c3932d447b389346cc47c4c5b162788c 373 Pfam PF02542 YgbB family 214 365 3.3E-58 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 YH65_08545 c3932d447b389346cc47c4c5b162788c 373 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 212 367 31.501 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 YH65_08545 c3932d447b389346cc47c4c5b162788c 373 SUPERFAMILY SSF53448 4 202 5.94E-44 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YH65_08545 c3932d447b389346cc47c4c5b162788c 373 Gene3D G3DSA:3.90.550.10 1 205 1.2E-51 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YH65_08545 c3932d447b389346cc47c4c5b162788c 373 Gene3D G3DSA:3.30.1330.50 210 372 1.7E-62 T 11-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 YH65_08545 c3932d447b389346cc47c4c5b162788c 373 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 246 261 - T 11-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 YH65_08545 c3932d447b389346cc47c4c5b162788c 373 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 5 200 5.8E-32 T 11-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 YH65_08545 c3932d447b389346cc47c4c5b162788c 373 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 215 365 2.9E-56 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 YH65_04620 861a587752e014ce087a3b769e631592 359 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 4 359 37.854 T 11-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 YH65_04620 861a587752e014ce087a3b769e631592 359 Gene3D G3DSA:3.30.420.40 11 355 4.0E-117 T 11-10-2018 YH65_04620 861a587752e014ce087a3b769e631592 359 Gene3D G3DSA:3.30.420.40 144 320 4.0E-117 T 11-10-2018 YH65_04620 861a587752e014ce087a3b769e631592 359 SUPERFAMILY SSF53067 6 334 1.08E-26 T 11-10-2018 YH65_04620 861a587752e014ce087a3b769e631592 359 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 5 358 2.2E-133 T 11-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 YH65_01720 79deb2c1c2c665c6f630b696b2623325 337 SMART SM00382 51 186 8.0E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain YH65_01720 79deb2c1c2c665c6f630b696b2623325 337 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 251 326 1.0E-25 T 11-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 YH65_01720 79deb2c1c2c665c6f630b696b2623325 337 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 24 325 1.7E-137 T 11-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 YH65_01720 79deb2c1c2c665c6f630b696b2623325 337 Gene3D G3DSA:3.40.50.300 18 181 6.1E-43 T 11-10-2018 YH65_01720 79deb2c1c2c665c6f630b696b2623325 337 SUPERFAMILY SSF52540 20 250 6.12E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_01720 79deb2c1c2c665c6f630b696b2623325 337 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 253 325 2.5E-26 T 11-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 YH65_01720 79deb2c1c2c665c6f630b696b2623325 337 Gene3D G3DSA:1.10.10.10 257 334 1.7E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YH65_01720 79deb2c1c2c665c6f630b696b2623325 337 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 4 235 1.8E-111 T 11-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 YH65_01720 79deb2c1c2c665c6f630b696b2623325 337 Gene3D G3DSA:1.10.8.60 182 256 1.4E-26 T 11-10-2018 YH65_01720 79deb2c1c2c665c6f630b696b2623325 337 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 337 152.63 T 11-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 YH65_01720 79deb2c1c2c665c6f630b696b2623325 337 SUPERFAMILY SSF46785 256 326 2.08E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YH65_10015 20a9a93c35ed261592878d903313980e 181 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 7 163 3.1E-43 T 11-10-2018 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 YH65_10015 20a9a93c35ed261592878d903313980e 181 Gene3D G3DSA:2.102.10.10 40 163 1.5E-28 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 YH65_10015 20a9a93c35ed261592878d903313980e 181 PRINTS PR00162 Rieske 2Fe-2S subunit signature 103 114 6.4E-8 T 11-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 YH65_10015 20a9a93c35ed261592878d903313980e 181 PRINTS PR00162 Rieske 2Fe-2S subunit signature 124 136 6.4E-8 T 11-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 YH65_10015 20a9a93c35ed261592878d903313980e 181 PRINTS PR00162 Rieske 2Fe-2S subunit signature 136 148 6.4E-8 T 11-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 YH65_10015 20a9a93c35ed261592878d903313980e 181 Pfam PF00355 Rieske [2Fe-2S] domain 52 151 1.4E-11 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 YH65_10015 20a9a93c35ed261592878d903313980e 181 SUPERFAMILY SSF50022 30 173 2.05E-28 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 YH65_09845 22de879fba6b2c558b15737d120e4a2a 226 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 130 212 6.4E-13 T 11-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 YH65_09845 22de879fba6b2c558b15737d120e4a2a 226 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 53 106 1.0E-17 T 11-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 YH65_09845 22de879fba6b2c558b15737d120e4a2a 226 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 6 214 33.037 T 11-10-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 YH65_09845 22de879fba6b2c558b15737d120e4a2a 226 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 127 209 8.5E-24 T 11-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 YH65_09845 22de879fba6b2c558b15737d120e4a2a 226 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 4 107 31.235 T 11-10-2018 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 YH65_09845 22de879fba6b2c558b15737d120e4a2a 226 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 30 103 9.2E-34 T 11-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 YH65_09845 22de879fba6b2c558b15737d120e4a2a 226 Gene3D G3DSA:1.10.287.1080 123 214 2.7E-25 T 11-10-2018 YH65_09845 22de879fba6b2c558b15737d120e4a2a 226 Gene3D G3DSA:3.10.20.400 2 94 1.2E-38 T 11-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 YH65_09845 22de879fba6b2c558b15737d120e4a2a 226 SUPERFAMILY SSF101386 125 213 5.79E-20 T 11-10-2018 YH65_09845 22de879fba6b2c558b15737d120e4a2a 226 SUPERFAMILY SSF141734 6 112 1.28E-46 T 11-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 YH65_02485 2af2283432c12f5c9f5f7013448a897f 351 TIGRFAM TIGR03699 menaquin_MqnC: dehypoxanthine futalosine cyclase 6 348 1.1E-153 T 11-10-2018 IPR022431 Cyclic dehypoxanthine futalosine synthase GO:0009234 KEGG: 00130+1.21.98.1|MetaCyc: PWY-7371|MetaCyc: PWY-7374 YH65_02485 2af2283432c12f5c9f5f7013448a897f 351 TIGRFAM TIGR00423 TIGR00423: radical SAM domain protein, CofH subfamily 42 348 4.2E-133 T 11-10-2018 IPR020050 FO synthase, subunit 2 GO:0016765 KEGG: 00680+2.5.1.77 YH65_02485 2af2283432c12f5c9f5f7013448a897f 351 SUPERFAMILY SSF102114 6 336 3.01E-52 T 11-10-2018 YH65_02485 2af2283432c12f5c9f5f7013448a897f 351 Gene3D G3DSA:3.20.20.70 2 348 2.0E-55 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YH65_02485 2af2283432c12f5c9f5f7013448a897f 351 Pfam PF04055 Radical SAM superfamily 49 220 6.3E-16 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 YH65_02485 2af2283432c12f5c9f5f7013448a897f 351 PIRSF PIRSF004762 1 350 2.2E-107 T 11-10-2018 YH65_02485 2af2283432c12f5c9f5f7013448a897f 351 Hamap MF_00992 Cyclic dehypoxanthine futalosine synthase [mqnC]. 4 351 52.554 T 11-10-2018 IPR022431 Cyclic dehypoxanthine futalosine synthase GO:0009234 KEGG: 00130+1.21.98.1|MetaCyc: PWY-7371|MetaCyc: PWY-7374 YH65_04815 532654893d9c615824cb7035c22fe6ce 207 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 183 9.3E-47 T 11-10-2018 YH65_04815 532654893d9c615824cb7035c22fe6ce 207 Gene3D G3DSA:3.40.50.1000 6 189 1.4E-47 T 11-10-2018 IPR023214 HAD superfamily YH65_04815 532654893d9c615824cb7035c22fe6ce 207 SUPERFAMILY SSF56784 1 204 1.71E-49 T 11-10-2018 IPR036412 HAD-like superfamily YH65_04815 532654893d9c615824cb7035c22fe6ce 207 Gene3D G3DSA:1.10.150.240 18 82 1.4E-47 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 YH65_04815 532654893d9c615824cb7035c22fe6ce 207 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 90 177 5.2E-7 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 YH65_04815 532654893d9c615824cb7035c22fe6ce 207 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 73 183 2.6E-10 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 YH65_04815 532654893d9c615824cb7035c22fe6ce 207 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 11-10-2018 YH65_07125 dca23ad0ba7f44657d4b1921ea5a3fa8 467 Gene3D G3DSA:2.60.120.10 342 452 2.3E-17 T 11-10-2018 IPR014710 RmlC-like jelly roll fold YH65_07125 dca23ad0ba7f44657d4b1921ea5a3fa8 467 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 2 463 2.2E-165 T 11-10-2018 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 YH65_07125 dca23ad0ba7f44657d4b1921ea5a3fa8 467 Pfam PF01050 Mannose-6-phosphate isomerase 311 460 3.6E-64 T 11-10-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 YH65_07125 dca23ad0ba7f44657d4b1921ea5a3fa8 467 Gene3D G3DSA:3.90.550.10 1 341 1.5E-111 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YH65_07125 dca23ad0ba7f44657d4b1921ea5a3fa8 467 SUPERFAMILY SSF51182 179 462 1.39E-71 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily YH65_07125 dca23ad0ba7f44657d4b1921ea5a3fa8 467 SUPERFAMILY SSF53448 1 273 1.45E-65 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YH65_07125 dca23ad0ba7f44657d4b1921ea5a3fa8 467 Pfam PF00483 Nucleotidyl transferase 3 278 1.0E-60 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 YH65_00715 a298a7510612e3357ebc4cc69aa11271 240 PRINTS PR01374 Gram-negative bacterial tonB protein signature 181 199 7.4E-9 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 YH65_00715 a298a7510612e3357ebc4cc69aa11271 240 PRINTS PR01374 Gram-negative bacterial tonB protein signature 70 80 7.4E-9 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 YH65_00715 a298a7510612e3357ebc4cc69aa11271 240 PRINTS PR01374 Gram-negative bacterial tonB protein signature 160 181 7.4E-9 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 YH65_00715 a298a7510612e3357ebc4cc69aa11271 240 Gene3D G3DSA:3.30.1150.10 104 240 8.3E-17 T 11-10-2018 YH65_00715 a298a7510612e3357ebc4cc69aa11271 240 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 165 235 9.8E-13 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 YH65_00715 a298a7510612e3357ebc4cc69aa11271 240 SUPERFAMILY SSF74653 73 232 2.09E-13 T 11-10-2018 YH65_00715 a298a7510612e3357ebc4cc69aa11271 240 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 167 239 1.3E-10 T 11-10-2018 IPR006260 TonB/TolA, C-terminal YH65_05600 e31a3f3e97ad07f4af52a023a28f58cc 643 Gene3D G3DSA:3.40.720.10 274 555 9.3E-83 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 YH65_05600 e31a3f3e97ad07f4af52a023a28f58cc 643 Pfam PF00884 Sulfatase 279 547 5.6E-41 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 YH65_05600 e31a3f3e97ad07f4af52a023a28f58cc 643 SUPERFAMILY SSF53649 277 594 1.57E-64 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 YH65_05600 e31a3f3e97ad07f4af52a023a28f58cc 643 Gene3D G3DSA:3.30.1120.80 556 612 9.3E-83 T 11-10-2018 YH65_05600 e31a3f3e97ad07f4af52a023a28f58cc 643 PIRSF PIRSF005091 5 643 4.0E-85 T 11-10-2018 IPR012160 Lipoteichoic acid synthase-like YH65_10130 fea95869931ff34fb7e67b432d67d304 776 Gene3D G3DSA:3.40.50.300 397 498 8.9E-6 T 11-10-2018 YH65_10130 fea95869931ff34fb7e67b432d67d304 776 SUPERFAMILY SSF52980 535 707 1.18E-7 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 YH65_10130 fea95869931ff34fb7e67b432d67d304 776 SUPERFAMILY SSF52540 235 496 1.12E-15 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_10130 fea95869931ff34fb7e67b432d67d304 776 Gene3D G3DSA:3.90.320.10 528 772 1.9E-20 T 11-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal YH65_10130 fea95869931ff34fb7e67b432d67d304 776 Pfam PF12705 PD-(D/E)XK nuclease superfamily 535 771 3.9E-32 T 11-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type YH65_09965 a5d647e008d322fc560097f621abfda6 193 Gene3D G3DSA:3.30.479.10 1 144 4.3E-24 T 11-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 YH65_09965 a5d647e008d322fc560097f621abfda6 193 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 3 143 1.1E-25 T 11-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 YH65_09965 a5d647e008d322fc560097f621abfda6 193 SUPERFAMILY SSF55620 1 145 5.45E-32 T 11-10-2018 YH65_01000 f3433dd89f44f29d20e999d76ae83edb 435 SUPERFAMILY SSF52540 61 267 1.42E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_01000 f3433dd89f44f29d20e999d76ae83edb 435 Gene3D G3DSA:3.40.50.300 51 309 6.2E-48 T 11-10-2018 YH65_01000 f3433dd89f44f29d20e999d76ae83edb 435 Pfam PF00005 ABC transporter 66 197 5.2E-21 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YH65_01000 f3433dd89f44f29d20e999d76ae83edb 435 SMART SM00382 75 255 2.4E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain YH65_09110 44fb47a5a37fd34565b980873385f1eb 271 Gene3D G3DSA:1.10.150.130 2 87 1.9E-8 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal YH65_09110 44fb47a5a37fd34565b980873385f1eb 271 Gene3D G3DSA:1.10.443.10 92 269 3.4E-49 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 YH65_09110 44fb47a5a37fd34565b980873385f1eb 271 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 6 76 2.8E-11 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 YH65_09110 44fb47a5a37fd34565b980873385f1eb 271 SUPERFAMILY SSF56349 8 265 4.71E-48 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 YH65_09110 44fb47a5a37fd34565b980873385f1eb 271 Pfam PF00589 Phage integrase family 101 257 1.2E-31 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 YH65_02030 055a8f801d2a17da572585b51c7df032 309 Pfam PF13181 Tetratricopeptide repeat 54 81 2.7E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 YH65_02030 055a8f801d2a17da572585b51c7df032 309 Gene3D G3DSA:1.25.40.10 46 129 1.5E-13 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YH65_02030 055a8f801d2a17da572585b51c7df032 309 Pfam PF00515 Tetratricopeptide repeat 85 114 2.0E-8 T 11-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 YH65_02030 055a8f801d2a17da572585b51c7df032 309 SMART SM00028 50 83 0.032 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 YH65_02030 055a8f801d2a17da572585b51c7df032 309 SMART SM00028 85 115 0.027 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 YH65_02030 055a8f801d2a17da572585b51c7df032 309 SUPERFAMILY SSF48452 46 116 5.82E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YH65_10460 879af1e004c4bfa5592414c23d36ecc0 368 SMART SM00471 48 195 8.7E-12 T 11-10-2018 IPR003607 HD/PDEase domain YH65_10460 879af1e004c4bfa5592414c23d36ecc0 368 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 15 152 1.1E-54 T 11-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 YH65_10460 879af1e004c4bfa5592414c23d36ecc0 368 Pfam PF13286 Phosphohydrolase-associated domain 274 360 3.9E-21 T 11-10-2018 IPR026875 Phosphohydrolase-associated domain YH65_10460 879af1e004c4bfa5592414c23d36ecc0 368 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 1 363 33.205 T 11-10-2018 IPR023023 dNTP triphosphohydrolase, type 2 GO:0016793 YH65_10460 879af1e004c4bfa5592414c23d36ecc0 368 SUPERFAMILY SSF109604 15 363 1.26E-76 T 11-10-2018 YH65_10460 879af1e004c4bfa5592414c23d36ecc0 368 Gene3D G3DSA:1.10.3210.10 2 364 1.9E-115 T 11-10-2018 YH65_10460 879af1e004c4bfa5592414c23d36ecc0 368 Pfam PF01966 HD domain 52 184 1.4E-14 T 11-10-2018 IPR006674 HD domain YH65_06065 0af96920c1d060fcd36ef38ce145bfd4 322 Gene3D G3DSA:1.20.120.1870 196 316 1.0E-18 T 11-10-2018 YH65_06065 0af96920c1d060fcd36ef38ce145bfd4 322 SUPERFAMILY SSF140931 244 304 1.11E-9 T 11-10-2018 IPR036597 Fido-like domain superfamily YH65_06065 0af96920c1d060fcd36ef38ce145bfd4 322 Pfam PF13310 Virulence protein RhuM family 59 131 1.5E-23 T 11-10-2018 IPR011204 Virulence protein RhuM-like YH65_06065 0af96920c1d060fcd36ef38ce145bfd4 322 Pfam PF02661 Fic/DOC family 221 278 7.4E-11 T 11-10-2018 IPR003812 Fido domain YH65_10760 9a255377f37c54e298675dd6b51fef26 331 Pfam PF00586 AIR synthase related protein, N-terminal domain 60 160 4.4E-13 T 11-10-2018 IPR016188 PurM-like, N-terminal domain YH65_10760 9a255377f37c54e298675dd6b51fef26 331 Gene3D G3DSA:3.30.1330.10 3 166 2.5E-62 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily YH65_10760 9a255377f37c54e298675dd6b51fef26 331 SUPERFAMILY SSF55326 4 164 1.74E-46 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily YH65_10760 9a255377f37c54e298675dd6b51fef26 331 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 4 315 6.3E-123 T 11-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 YH65_10760 9a255377f37c54e298675dd6b51fef26 331 Gene3D G3DSA:3.90.650.10 169 331 2.7E-52 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily YH65_10760 9a255377f37c54e298675dd6b51fef26 331 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 4 331 40.964 T 11-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 YH65_10760 9a255377f37c54e298675dd6b51fef26 331 Pfam PF02769 AIR synthase related protein, C-terminal domain 173 316 7.7E-27 T 11-10-2018 IPR010918 PurM-like, C-terminal domain YH65_10760 9a255377f37c54e298675dd6b51fef26 331 SUPERFAMILY SSF56042 170 327 2.44E-43 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily YH65_01275 f2c7d39790c4f20d8766c173dc299af6 356 SUPERFAMILY SSF51735 1 122 3.35E-27 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily YH65_01275 f2c7d39790c4f20d8766c173dc299af6 356 Pfam PF13288 DXP reductoisomerase C-terminal domain 241 351 3.2E-24 T 11-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 YH65_01275 f2c7d39790c4f20d8766c173dc299af6 356 SUPERFAMILY SSF69055 267 355 3.27E-20 T 11-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 YH65_01275 f2c7d39790c4f20d8766c173dc299af6 356 SUPERFAMILY SSF55347 113 237 2.81E-43 T 11-10-2018 YH65_01275 f2c7d39790c4f20d8766c173dc299af6 356 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 119 1.2E-33 T 11-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 YH65_01275 f2c7d39790c4f20d8766c173dc299af6 356 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 353 1.8E-108 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 YH65_01275 f2c7d39790c4f20d8766c173dc299af6 356 Gene3D G3DSA:3.40.50.720 1 131 1.5E-37 T 11-10-2018 YH65_01275 f2c7d39790c4f20d8766c173dc299af6 356 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 1 356 38.55 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 YH65_01275 f2c7d39790c4f20d8766c173dc299af6 356 Gene3D G3DSA:1.10.1740.10 278 356 2.4E-14 T 11-10-2018 YH65_01275 f2c7d39790c4f20d8766c173dc299af6 356 PIRSF PIRSF006205 1 356 4.1E-117 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 YH65_01275 f2c7d39790c4f20d8766c173dc299af6 356 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 127 207 1.3E-32 T 11-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 YH65_06840 59eecfaaeb167130a6946b7a467c6189 507 Gene3D G3DSA:1.10.3720.10 4 247 1.2E-33 T 11-10-2018 IPR035906 MetI-like superfamily YH65_06840 59eecfaaeb167130a6946b7a467c6189 507 SUPERFAMILY SSF161098 3 247 3.35E-30 T 11-10-2018 IPR035906 MetI-like superfamily YH65_06840 59eecfaaeb167130a6946b7a467c6189 507 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 328 503 2.0E-10 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YH65_06840 59eecfaaeb167130a6946b7a467c6189 507 Gene3D G3DSA:1.10.3720.10 265 506 8.4E-28 T 11-10-2018 IPR035906 MetI-like superfamily YH65_06840 59eecfaaeb167130a6946b7a467c6189 507 SUPERFAMILY SSF161098 266 505 1.7E-31 T 11-10-2018 IPR035906 MetI-like superfamily YH65_05085 dc9a892e7ddffa811394d31b2856f5c0 316 SUPERFAMILY SSF50998 33 308 1.53E-19 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily YH65_05085 dc9a892e7ddffa811394d31b2856f5c0 316 Gene3D G3DSA:2.130.10.10 25 316 2.9E-15 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 YH65_08010 521cd6253fb47a7a9df610db4f205eea 279 PIRSF PIRSF000903 1 275 4.4E-97 T 11-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 YH65_08010 521cd6253fb47a7a9df610db4f205eea 279 Gene3D G3DSA:3.60.21.10 1 271 4.4E-66 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like YH65_08010 521cd6253fb47a7a9df610db4f205eea 279 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 258 2.2E-78 T 11-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 YH65_08010 521cd6253fb47a7a9df610db4f205eea 279 Pfam PF00149 Calcineurin-like phosphoesterase 2 158 1.2E-14 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 YH65_08010 521cd6253fb47a7a9df610db4f205eea 279 SUPERFAMILY SSF56300 1 271 6.29E-46 T 11-10-2018 YH65_07470 3d2c3fd25f34de6b8553d42f80d30e41 99 Pfam PF13466 STAS domain 14 91 1.1E-12 T 11-10-2018 IPR002645 STAS domain YH65_07470 3d2c3fd25f34de6b8553d42f80d30e41 99 SUPERFAMILY SSF52091 5 95 6.47E-17 T 11-10-2018 IPR036513 STAS domain superfamily YH65_07470 3d2c3fd25f34de6b8553d42f80d30e41 99 Gene3D G3DSA:3.30.750.24 1 99 2.0E-17 T 11-10-2018 IPR036513 STAS domain superfamily YH65_07470 3d2c3fd25f34de6b8553d42f80d30e41 99 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 4 96 4.0E-17 T 11-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 YH65_07265 822543757a7c35da7a334d8bdb18da1d 240 SUPERFAMILY SSF52540 3 236 2.84E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_07265 822543757a7c35da7a334d8bdb18da1d 240 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YH65_07265 822543757a7c35da7a334d8bdb18da1d 240 SMART SM00382 28 201 3.2E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain YH65_07265 822543757a7c35da7a334d8bdb18da1d 240 Pfam PF00005 ABC transporter 20 165 1.8E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YH65_07265 822543757a7c35da7a334d8bdb18da1d 240 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 214 235 1.1E-4 T 11-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal YH65_07265 822543757a7c35da7a334d8bdb18da1d 240 Gene3D G3DSA:3.40.50.300 2 240 1.4E-67 T 11-10-2018 YH65_07265 822543757a7c35da7a334d8bdb18da1d 240 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 3 239 1.6E-101 T 11-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 YH65_09215 0f68f561ea34fcdb843edd7570d894c5 440 SUPERFAMILY SSF56317 243 424 3.49E-13 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily YH65_09215 0f68f561ea34fcdb843edd7570d894c5 440 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 65 432 6.4E-43 T 11-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 YH65_05205 6a8dde37ea60b985c79c23b1048d9b7d 428 Gene3D G3DSA:3.40.50.620 1 306 3.1E-86 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YH65_05205 6a8dde37ea60b985c79c23b1048d9b7d 428 PRINTS PR00987 Glutamyl-tRNA synthetase signature 3 15 2.5E-15 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 YH65_05205 6a8dde37ea60b985c79c23b1048d9b7d 428 PRINTS PR00987 Glutamyl-tRNA synthetase signature 17 28 2.5E-15 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 YH65_05205 6a8dde37ea60b985c79c23b1048d9b7d 428 PRINTS PR00987 Glutamyl-tRNA synthetase signature 188 196 2.5E-15 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 YH65_05205 6a8dde37ea60b985c79c23b1048d9b7d 428 PRINTS PR00987 Glutamyl-tRNA synthetase signature 32 45 2.5E-15 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 YH65_05205 6a8dde37ea60b985c79c23b1048d9b7d 428 PRINTS PR00987 Glutamyl-tRNA synthetase signature 172 182 2.5E-15 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 YH65_05205 6a8dde37ea60b985c79c23b1048d9b7d 428 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 1 420 2.3E-102 T 11-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 YH65_05205 6a8dde37ea60b985c79c23b1048d9b7d 428 SUPERFAMILY SSF52374 2 290 3.75E-71 T 11-10-2018 YH65_05205 6a8dde37ea60b985c79c23b1048d9b7d 428 Gene3D G3DSA:1.10.10.350 361 422 3.7E-5 T 11-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 YH65_05205 6a8dde37ea60b985c79c23b1048d9b7d 428 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 1 427 23.137 T 11-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 YH65_05205 6a8dde37ea60b985c79c23b1048d9b7d 428 SUPERFAMILY SSF48163 274 419 2.62E-15 T 11-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 YH65_05205 6a8dde37ea60b985c79c23b1048d9b7d 428 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 297 9.0E-60 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 YH65_04270 e9349929a802ffe52ec73989e69cd6a6 533 SUPERFAMILY SSF54862 38 214 3.24E-51 T 11-10-2018 YH65_04270 e9349929a802ffe52ec73989e69cd6a6 533 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 126 137 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YH65_04270 e9349929a802ffe52ec73989e69cd6a6 533 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 236 514 9.5E-26 T 11-10-2018 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 YH65_04270 e9349929a802ffe52ec73989e69cd6a6 533 Pfam PF13247 4Fe-4S dicluster domain 88 179 1.6E-22 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YH65_04270 e9349929a802ffe52ec73989e69cd6a6 533 Gene3D G3DSA:3.30.70.20 33 249 1.6E-45 T 11-10-2018 YH65_07820 78220f8d732d595c5bca706722019fcf 1018 SUPERFAMILY SSF82714 184 266 4.58E-13 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YH65_07820 78220f8d732d595c5bca706722019fcf 1018 Gene3D G3DSA:3.30.70.1430 555 655 1.6E-267 T 11-10-2018 YH65_07820 78220f8d732d595c5bca706722019fcf 1018 SUPERFAMILY SSF82714 707 789 6.8E-10 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YH65_07820 78220f8d732d595c5bca706722019fcf 1018 Gene3D G3DSA:1.20.1640.10 14 500 1.6E-267 T 11-10-2018 YH65_07820 78220f8d732d595c5bca706722019fcf 1018 Gene3D G3DSA:3.30.70.1440 656 853 1.6E-267 T 11-10-2018 YH65_07820 78220f8d732d595c5bca706722019fcf 1018 SUPERFAMILY SSF82693 138 325 9.42E-20 T 11-10-2018 YH65_07820 78220f8d732d595c5bca706722019fcf 1018 Gene3D G3DSA:3.30.2090.10 181 272 1.6E-267 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YH65_07820 78220f8d732d595c5bca706722019fcf 1018 Gene3D G3DSA:1.20.1640.10 501 1009 1.6E-267 T 11-10-2018 YH65_07820 78220f8d732d595c5bca706722019fcf 1018 SUPERFAMILY SSF82866 788 1016 1.57E-49 T 11-10-2018 YH65_07820 78220f8d732d595c5bca706722019fcf 1018 Pfam PF00873 AcrB/AcrD/AcrF family 6 1012 5.1E-255 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_07820 78220f8d732d595c5bca706722019fcf 1018 SUPERFAMILY SSF82693 42 128 2.49E-20 T 11-10-2018 YH65_07820 78220f8d732d595c5bca706722019fcf 1018 SUPERFAMILY SSF82866 292 493 9.68E-38 T 11-10-2018 YH65_07820 78220f8d732d595c5bca706722019fcf 1018 Gene3D G3DSA:3.30.70.1430 42 802 1.6E-267 T 11-10-2018 YH65_07820 78220f8d732d595c5bca706722019fcf 1018 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 4.4E-35 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_07820 78220f8d732d595c5bca706722019fcf 1018 PRINTS PR00702 Acriflavin resistance protein family signature 466 489 4.4E-35 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_07820 78220f8d732d595c5bca706722019fcf 1018 PRINTS PR00702 Acriflavin resistance protein family signature 441 464 4.4E-35 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_07820 78220f8d732d595c5bca706722019fcf 1018 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 4.4E-35 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_07820 78220f8d732d595c5bca706722019fcf 1018 PRINTS PR00702 Acriflavin resistance protein family signature 358 379 4.4E-35 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_07820 78220f8d732d595c5bca706722019fcf 1018 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 4.4E-35 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_07820 78220f8d732d595c5bca706722019fcf 1018 Gene3D G3DSA:3.30.2090.10 707 794 1.6E-267 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YH65_07820 78220f8d732d595c5bca706722019fcf 1018 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 6 1017 6.3E-275 T 11-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 YH65_07820 78220f8d732d595c5bca706722019fcf 1018 Gene3D G3DSA:3.30.70.1320 134 325 1.6E-267 T 11-10-2018 YH65_03790 c42b42ffcda074718a0686edc07dc3aa 304 Pfam PF13394 4Fe-4S single cluster domain 28 133 1.9E-5 T 11-10-2018 YH65_03790 c42b42ffcda074718a0686edc07dc3aa 304 Gene3D G3DSA:3.20.20.70 24 300 4.1E-23 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YH65_03790 c42b42ffcda074718a0686edc07dc3aa 304 Pfam PF04055 Radical SAM superfamily 28 188 1.5E-15 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 YH65_03790 c42b42ffcda074718a0686edc07dc3aa 304 SUPERFAMILY SSF102114 28 236 2.49E-25 T 11-10-2018 YH65_09840 f836a0e321c781814a08ee09d1bd6b7e 362 Pfam PF01145 SPFH domain / Band 7 family 61 264 5.8E-29 T 11-10-2018 IPR001107 Band 7 domain YH65_09840 f836a0e321c781814a08ee09d1bd6b7e 362 Gene3D G3DSA:3.30.479.30 128 246 1.0E-5 T 11-10-2018 YH65_09840 f836a0e321c781814a08ee09d1bd6b7e 362 SMART SM00244 57 244 4.2E-24 T 11-10-2018 IPR001107 Band 7 domain YH65_09840 f836a0e321c781814a08ee09d1bd6b7e 362 SUPERFAMILY SSF117892 134 249 1.19E-10 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily YH65_09840 f836a0e321c781814a08ee09d1bd6b7e 362 PRINTS PR00679 Prohibitin signature 239 262 4.7E-12 T 11-10-2018 IPR000163 Prohibitin GO:0016020 Reactome: R-HSA-8949664 YH65_09840 f836a0e321c781814a08ee09d1bd6b7e 362 PRINTS PR00679 Prohibitin signature 188 204 4.7E-12 T 11-10-2018 IPR000163 Prohibitin GO:0016020 Reactome: R-HSA-8949664 YH65_09840 f836a0e321c781814a08ee09d1bd6b7e 362 PRINTS PR00679 Prohibitin signature 165 183 4.7E-12 T 11-10-2018 IPR000163 Prohibitin GO:0016020 Reactome: R-HSA-8949664 YH65_09840 f836a0e321c781814a08ee09d1bd6b7e 362 PRINTS PR00679 Prohibitin signature 142 161 4.7E-12 T 11-10-2018 IPR000163 Prohibitin GO:0016020 Reactome: R-HSA-8949664 YH65_09840 f836a0e321c781814a08ee09d1bd6b7e 362 PRINTS PR00679 Prohibitin signature 262 278 4.7E-12 T 11-10-2018 IPR000163 Prohibitin GO:0016020 Reactome: R-HSA-8949664 YH65_11100 af9ac9ae3780b80bf3fe44329ce08ef2 149 Pfam PF07661 MORN repeat variant 123 144 6.8E-4 T 11-10-2018 IPR011652 MORN variant YH65_11100 af9ac9ae3780b80bf3fe44329ce08ef2 149 Pfam PF07661 MORN repeat variant 30 42 0.62 T 11-10-2018 IPR011652 MORN variant YH65_11100 af9ac9ae3780b80bf3fe44329ce08ef2 149 Gene3D G3DSA:3.90.930.1 20 147 1.8E-21 T 11-10-2018 YH65_11100 af9ac9ae3780b80bf3fe44329ce08ef2 149 SUPERFAMILY SSF82185 32 144 4.05E-20 T 11-10-2018 YH65_01745 dfa9a567a1f9d291e581c4f7abfbf859 455 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 3 455 1.6E-192 T 11-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 YH65_01745 dfa9a567a1f9d291e581c4f7abfbf859 455 Pfam PF06969 HemN C-terminal domain 360 418 3.9E-8 T 11-10-2018 IPR010723 HemN, C-terminal YH65_01745 dfa9a567a1f9d291e581c4f7abfbf859 455 Pfam PF04055 Radical SAM superfamily 52 225 1.5E-21 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 YH65_01745 dfa9a567a1f9d291e581c4f7abfbf859 455 Gene3D G3DSA:1.10.10.920 361 455 3.6E-30 T 11-10-2018 YH65_01745 dfa9a567a1f9d291e581c4f7abfbf859 455 SUPERFAMILY SSF102114 6 441 1.96E-134 T 11-10-2018 YH65_01745 dfa9a567a1f9d291e581c4f7abfbf859 455 PIRSF PIRSF000167 1 451 5.2E-166 T 11-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 YH65_01745 dfa9a567a1f9d291e581c4f7abfbf859 455 SMART SM00729 47 269 2.2E-55 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 YH65_01745 dfa9a567a1f9d291e581c4f7abfbf859 455 Gene3D G3DSA:3.80.30.20 2 360 4.1E-114 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe YH65_01220 317f0ba0f6422dbf214b753f81182202 1509 Pfam PF04998 RNA polymerase Rpb1, domain 5 756 1447 2.8E-65 T 11-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YH65_01220 317f0ba0f6422dbf214b753f81182202 1509 Pfam PF00623 RNA polymerase Rpb1, domain 2 358 399 5.3E-8 T 11-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YH65_01220 317f0ba0f6422dbf214b753f81182202 1509 Pfam PF00623 RNA polymerase Rpb1, domain 2 400 499 7.5E-30 T 11-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YH65_01220 317f0ba0f6422dbf214b753f81182202 1509 Gene3D G3DSA:2.40.50.100 1286 1349 1.2E-57 T 11-10-2018 YH65_01220 317f0ba0f6422dbf214b753f81182202 1509 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 753 3.8E-16 T 11-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YH65_01220 317f0ba0f6422dbf214b753f81182202 1509 Gene3D G3DSA:1.10.1790.20 1270 1447 1.2E-57 T 11-10-2018 YH65_01220 317f0ba0f6422dbf214b753f81182202 1509 Gene3D G3DSA:1.10.150.390 1450 1507 8.4E-22 T 11-10-2018 YH65_01220 317f0ba0f6422dbf214b753f81182202 1509 SUPERFAMILY SSF64484 20 1499 0.0 T 11-10-2018 YH65_01220 317f0ba0f6422dbf214b753f81182202 1509 SMART SM00663 249 528 2.6E-173 T 11-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YH65_01220 317f0ba0f6422dbf214b753f81182202 1509 Gene3D G3DSA:1.10.132.30 642 780 8.4E-64 T 11-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YH65_01220 317f0ba0f6422dbf214b753f81182202 1509 Gene3D G3DSA:1.10.274.100 504 564 4.1E-20 T 11-10-2018 YH65_01220 317f0ba0f6422dbf214b753f81182202 1509 Gene3D G3DSA:1.10.274.100 565 641 6.1E-16 T 11-10-2018 YH65_01220 317f0ba0f6422dbf214b753f81182202 1509 Pfam PF04997 RNA polymerase Rpb1, domain 1 20 356 3.9E-83 T 11-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YH65_01220 317f0ba0f6422dbf214b753f81182202 1509 Gene3D G3DSA:1.10.40.90 388 430 1.6E-19 T 11-10-2018 YH65_01220 317f0ba0f6422dbf214b753f81182202 1509 Gene3D G3DSA:2.40.50.100 1171 1261 7.0E-19 T 11-10-2018 YH65_01220 317f0ba0f6422dbf214b753f81182202 1509 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 25 1156 0.0 T 11-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YH65_01220 317f0ba0f6422dbf214b753f81182202 1509 Pfam PF04983 RNA polymerase Rpb1, domain 3 503 645 8.2E-25 T 11-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YH65_01220 317f0ba0f6422dbf214b753f81182202 1509 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 18 1509 18.756 T 11-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YH65_00790 9c67bc5567b5f5b33da89929089286c1 226 SUPERFAMILY SSF160387 115 222 9.15E-27 T 11-10-2018 YH65_00790 9c67bc5567b5f5b33da89929089286c1 226 Gene3D G3DSA:3.30.70.2050 171 226 2.2E-12 T 11-10-2018 YH65_00790 9c67bc5567b5f5b33da89929089286c1 226 Pfam PF05573 NosL 88 218 2.3E-30 T 11-10-2018 IPR008719 Nitrous oxide reductase accessory protein NosL YH65_05225 630c3a03b2be698b5d6ab5d132e231fa 492 Pfam PF00271 Helicase conserved C-terminal domain 224 331 3.8E-31 T 11-10-2018 IPR001650 Helicase, C-terminal YH65_05225 630c3a03b2be698b5d6ab5d132e231fa 492 SMART SM00487 20 214 5.4E-60 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain YH65_05225 630c3a03b2be698b5d6ab5d132e231fa 492 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 145 153 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site YH65_05225 630c3a03b2be698b5d6ab5d132e231fa 492 Pfam PF00270 DEAD/DEAH box helicase 26 187 2.0E-45 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 YH65_05225 630c3a03b2be698b5d6ab5d132e231fa 492 SMART SM00490 250 331 1.8E-32 T 11-10-2018 IPR001650 Helicase, C-terminal YH65_05225 630c3a03b2be698b5d6ab5d132e231fa 492 SUPERFAMILY SSF52540 71 353 3.6E-77 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_05225 630c3a03b2be698b5d6ab5d132e231fa 492 Gene3D G3DSA:3.40.50.300 1 203 1.1E-70 T 11-10-2018 YH65_05225 630c3a03b2be698b5d6ab5d132e231fa 492 Gene3D G3DSA:3.40.50.300 205 421 3.6E-54 T 11-10-2018 YH65_08455 20f6450674e0d0b9f59629b23388d05b 359 PIRSF PIRSF004762 1 359 1.9E-109 T 11-10-2018 YH65_08455 20f6450674e0d0b9f59629b23388d05b 359 SUPERFAMILY SSF102114 18 348 2.35E-47 T 11-10-2018 YH65_08455 20f6450674e0d0b9f59629b23388d05b 359 Gene3D G3DSA:3.20.20.70 1 333 3.7E-56 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YH65_08455 20f6450674e0d0b9f59629b23388d05b 359 SMART SM00729 55 275 0.0041 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 YH65_08455 20f6450674e0d0b9f59629b23388d05b 359 TIGRFAM TIGR00423 TIGR00423: radical SAM domain protein, CofH subfamily 52 356 2.6E-118 T 11-10-2018 IPR020050 FO synthase, subunit 2 GO:0016765 KEGG: 00680+2.5.1.77 YH65_08455 20f6450674e0d0b9f59629b23388d05b 359 Hamap MF_00993 Aminodeoxyfutalosine synthase [mqnE]. 7 359 50.593 T 11-10-2018 IPR022432 Aminodeoxyfutalosine synthase GO:0009234 KEGG: 00130+2.5.1.120|MetaCyc: PWY-7371|MetaCyc: PWY-7374 YH65_08455 20f6450674e0d0b9f59629b23388d05b 359 Pfam PF04055 Radical SAM superfamily 59 230 3.3E-17 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 YH65_08455 20f6450674e0d0b9f59629b23388d05b 359 TIGRFAM TIGR03700 mena_SCO4494: putative menaquinone biosynthesis radical SAM enzyme, SCO4494 family 10 356 2.5E-150 T 11-10-2018 IPR022432 Aminodeoxyfutalosine synthase GO:0009234 KEGG: 00130+2.5.1.120|MetaCyc: PWY-7371|MetaCyc: PWY-7374 YH65_01110 b33e83176e25e01e545f21d9a5d15608 116 SUPERFAMILY SSF140663 5 100 1.14E-15 T 11-10-2018 IPR023203 TTHA0068-like superfamily YH65_01110 b33e83176e25e01e545f21d9a5d15608 116 Gene3D G3DSA:1.20.58.500 10 103 1.1E-10 T 11-10-2018 YH65_01110 b33e83176e25e01e545f21d9a5d15608 116 Pfam PF03745 Domain of unknown function (DUF309) 12 70 2.5E-15 T 11-10-2018 IPR005500 Protein of unknown function DUF309 YH65_02430 3d046a38b202991fb5969e04e1dd3f17 453 Gene3D G3DSA:1.10.285.10 7 387 2.0E-158 T 11-10-2018 YH65_02430 3d046a38b202991fb5969e04e1dd3f17 453 PIRSF PIRSF000185 22 453 3.2E-114 T 11-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 YH65_02430 3d046a38b202991fb5969e04e1dd3f17 453 Gene3D G3DSA:3.40.50.720 209 378 2.0E-158 T 11-10-2018 YH65_02430 3d046a38b202991fb5969e04e1dd3f17 453 Gene3D G3DSA:3.40.50.10860 55 190 2.0E-158 T 11-10-2018 YH65_02430 3d046a38b202991fb5969e04e1dd3f17 453 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 57 185 7.8E-48 T 11-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 YH65_02430 3d046a38b202991fb5969e04e1dd3f17 453 SUPERFAMILY SSF51735 202 451 1.53E-71 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily YH65_02430 3d046a38b202991fb5969e04e1dd3f17 453 Gene3D G3DSA:1.10.285.10 388 453 1.1E-7 T 11-10-2018 YH65_02430 3d046a38b202991fb5969e04e1dd3f17 453 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 202 451 1.2E-80 T 11-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 YH65_02430 3d046a38b202991fb5969e04e1dd3f17 453 SMART SM00839 204 451 1.9E-81 T 11-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 YH65_02430 3d046a38b202991fb5969e04e1dd3f17 453 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 122 135 - T 11-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 YH65_02430 3d046a38b202991fb5969e04e1dd3f17 453 SUPERFAMILY SSF53223 7 196 5.44E-71 T 11-10-2018 YH65_02430 3d046a38b202991fb5969e04e1dd3f17 453 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 193 215 1.7E-26 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 YH65_02430 3d046a38b202991fb5969e04e1dd3f17 453 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 235 255 1.7E-26 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 YH65_02430 3d046a38b202991fb5969e04e1dd3f17 453 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 114 128 1.7E-26 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 YH65_02430 3d046a38b202991fb5969e04e1dd3f17 453 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 377 388 1.7E-26 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 YH65_10315 cf40d70fd2e20719e761ce861a15e527 228 Pfam PF02796 Helix-turn-helix domain of resolvase 140 175 4.4E-7 T 11-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 YH65_10315 cf40d70fd2e20719e761ce861a15e527 228 SMART SM00857 2 134 9.9E-6 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 YH65_10315 cf40d70fd2e20719e761ce861a15e527 228 Pfam PF00239 Resolvase, N terminal domain 3 113 8.4E-10 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 YH65_10315 cf40d70fd2e20719e761ce861a15e527 228 Gene3D G3DSA:3.40.50.1390 2 138 9.9E-10 T 11-10-2018 YH65_10315 cf40d70fd2e20719e761ce861a15e527 228 Gene3D G3DSA:1.10.10.60 139 180 3.3E-5 T 11-10-2018 YH65_10315 cf40d70fd2e20719e761ce861a15e527 228 SUPERFAMILY SSF53041 1 106 1.19E-11 T 11-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 YH65_04660 b1bdbbe6060e45fb41027744ea8d0826 512 PIRSF PIRSF003128 1 511 2.2E-99 T 11-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 YH65_04660 b1bdbbe6060e45fb41027744ea8d0826 512 SMART SM00382 21 470 8.9E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain YH65_04660 b1bdbbe6060e45fb41027744ea8d0826 512 SUPERFAMILY SSF52540 3 475 3.37E-36 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_04660 b1bdbbe6060e45fb41027744ea8d0826 512 Gene3D G3DSA:3.40.50.300 238 509 1.2E-29 T 11-10-2018 YH65_04660 b1bdbbe6060e45fb41027744ea8d0826 512 Gene3D G3DSA:3.40.50.300 2 182 1.3E-13 T 11-10-2018 YH65_04660 b1bdbbe6060e45fb41027744ea8d0826 512 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 469 1.5E-15 T 11-10-2018 IPR003395 RecF/RecN/SMC, N-terminal YH65_06710 bad3691c9fe309d63f91955856fe1126 235 Gene3D G3DSA:2.60.200.40 111 154 1.3E-11 T 11-10-2018 YH65_06710 bad3691c9fe309d63f91955856fe1126 235 SUPERFAMILY SSF111331 40 226 3.92E-15 T 11-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily YH65_06710 bad3691c9fe309d63f91955856fe1126 235 Pfam PF00781 Diacylglycerol kinase catalytic domain 40 102 7.3E-8 T 11-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 YH65_06710 bad3691c9fe309d63f91955856fe1126 235 Gene3D G3DSA:3.40.50.10330 40 110 1.3E-11 T 11-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 YH65_08165 416a924bac10c77fcc57286757caa541 371 SUPERFAMILY SSF55874 256 359 2.38E-9 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YH65_08165 416a924bac10c77fcc57286757caa541 371 Gene3D G3DSA:3.30.450.20 146 231 6.7E-7 T 11-10-2018 YH65_08165 416a924bac10c77fcc57286757caa541 371 Gene3D G3DSA:3.30.565.10 237 369 7.7E-15 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YH65_08165 416a924bac10c77fcc57286757caa541 371 Pfam PF07568 Histidine kinase 181 254 1.1E-18 T 11-10-2018 IPR011495 Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain YH65_02035 942f8597ec271cffd66884f9f1f03cc1 533 Pfam PF13584 Oxygen tolerance 45 478 3.4E-63 T 11-10-2018 IPR025738 Aerotolerance-related protein BatD YH65_06565 672580a723f73dcbaedbaab005a143e8 171 SUPERFAMILY SSF140683 1 73 1.02E-15 T 11-10-2018 IPR038062 ScdA-like, N-terminal domain superfamily YH65_06565 672580a723f73dcbaedbaab005a143e8 171 Pfam PF10006 Uncharacterized conserved protein (DUF2249) 103 170 6.7E-11 T 11-10-2018 IPR018720 Domain of unknown function DUF2249 YH65_06565 672580a723f73dcbaedbaab005a143e8 171 Gene3D G3DSA:1.10.3910.10 1 72 1.0E-12 T 11-10-2018 IPR038062 ScdA-like, N-terminal domain superfamily YH65_06565 672580a723f73dcbaedbaab005a143e8 171 SUPERFAMILY SSF64307 93 170 6.07E-6 T 11-10-2018 IPR036868 TusA-like domain superfamily YH65_06565 672580a723f73dcbaedbaab005a143e8 171 Pfam PF08984 Domain of unknown function (DUF1858) 4 64 2.0E-17 T 11-10-2018 IPR015077 Domain of unknown function DUF1858 YH65_08065 483d26ad4232f3d4ac0fc9d600ac9595 184 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 10 183 1.4E-38 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase YH65_08065 483d26ad4232f3d4ac0fc9d600ac9595 184 SUPERFAMILY SSF100950 9 184 1.12E-38 T 11-10-2018 IPR037171 NagB/RpiA transferase-like YH65_08065 483d26ad4232f3d4ac0fc9d600ac9595 184 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 10 184 1.3E-26 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase YH65_08065 483d26ad4232f3d4ac0fc9d600ac9595 184 PIRSF PIRSF006806 6 184 8.2E-32 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase YH65_08065 483d26ad4232f3d4ac0fc9d600ac9595 184 Gene3D G3DSA:3.40.50.10420 9 184 1.3E-36 T 11-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily YH65_08410 1a4e5860c3c13f26283ba81c89a1f156 464 SUPERFAMILY SSF48557 11 461 4.87E-136 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 YH65_08410 1a4e5860c3c13f26283ba81c89a1f156 464 Gene3D G3DSA:1.20.200.10 121 451 2.4E-179 T 11-10-2018 YH65_08410 1a4e5860c3c13f26283ba81c89a1f156 464 Gene3D G3DSA:1.10.40.30 362 435 2.4E-179 T 11-10-2018 YH65_08410 1a4e5860c3c13f26283ba81c89a1f156 464 Pfam PF00206 Lyase 9 302 4.2E-67 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal YH65_08410 1a4e5860c3c13f26283ba81c89a1f156 464 ProSitePatterns PS00163 Fumarate lyases signature. 277 286 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 YH65_08410 1a4e5860c3c13f26283ba81c89a1f156 464 Gene3D G3DSA:1.10.275.10 27 231 2.4E-179 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal YH65_08410 1a4e5860c3c13f26283ba81c89a1f156 464 PRINTS PR00145 Argininosuccinate lyase family signature 144 164 1.9E-61 T 11-10-2018 YH65_08410 1a4e5860c3c13f26283ba81c89a1f156 464 PRINTS PR00145 Argininosuccinate lyase family signature 103 125 1.9E-61 T 11-10-2018 YH65_08410 1a4e5860c3c13f26283ba81c89a1f156 464 PRINTS PR00145 Argininosuccinate lyase family signature 312 331 1.9E-61 T 11-10-2018 YH65_08410 1a4e5860c3c13f26283ba81c89a1f156 464 PRINTS PR00145 Argininosuccinate lyase family signature 195 211 1.9E-61 T 11-10-2018 YH65_08410 1a4e5860c3c13f26283ba81c89a1f156 464 PRINTS PR00145 Argininosuccinate lyase family signature 277 293 1.9E-61 T 11-10-2018 YH65_08410 1a4e5860c3c13f26283ba81c89a1f156 464 PRINTS PR00145 Argininosuccinate lyase family signature 233 257 1.9E-61 T 11-10-2018 YH65_08410 1a4e5860c3c13f26283ba81c89a1f156 464 Pfam PF14698 Argininosuccinate lyase C-terminal 367 433 1.9E-21 T 11-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 YH65_08410 1a4e5860c3c13f26283ba81c89a1f156 464 Hamap MF_00006 Argininosuccinate lyase [argH]. 4 456 40.116 T 11-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 YH65_08410 1a4e5860c3c13f26283ba81c89a1f156 464 TIGRFAM TIGR00838 argH: argininosuccinate lyase 7 457 3.6E-177 T 11-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 YH65_08410 1a4e5860c3c13f26283ba81c89a1f156 464 PRINTS PR00149 Fumarate lyase superfamily signature 104 122 6.1E-26 T 11-10-2018 IPR000362 Fumarate lyase family YH65_08410 1a4e5860c3c13f26283ba81c89a1f156 464 PRINTS PR00149 Fumarate lyase superfamily signature 149 167 6.1E-26 T 11-10-2018 IPR000362 Fumarate lyase family YH65_08410 1a4e5860c3c13f26283ba81c89a1f156 464 PRINTS PR00149 Fumarate lyase superfamily signature 233 260 6.1E-26 T 11-10-2018 IPR000362 Fumarate lyase family YH65_08410 1a4e5860c3c13f26283ba81c89a1f156 464 PRINTS PR00149 Fumarate lyase superfamily signature 277 293 6.1E-26 T 11-10-2018 IPR000362 Fumarate lyase family YH65_05975 17e7d50ea95ca263037635f410ec41f6 222 Gene3D G3DSA:3.40.470.10 40 222 8.4E-74 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 YH65_05975 17e7d50ea95ca263037635f410ec41f6 222 SMART SM00986 66 213 3.1E-44 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 YH65_05975 17e7d50ea95ca263037635f410ec41f6 222 SUPERFAMILY SSF52141 39 219 2.13E-65 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 YH65_05975 17e7d50ea95ca263037635f410ec41f6 222 Pfam PF03167 Uracil DNA glycosylase superfamily 66 212 5.6E-50 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 YH65_05975 17e7d50ea95ca263037635f410ec41f6 222 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 52 220 4.9E-64 T 11-10-2018 IPR005273 Uracil-DNA glycosylase family 4 YH65_05975 17e7d50ea95ca263037635f410ec41f6 222 SMART SM00987 66 213 3.1E-44 T 11-10-2018 YH65_02810 8fca8f1db3bbbe864bccfffbcc4913c3 644 Pfam PF03190 Protein of unknown function, DUF255 3 164 3.2E-70 T 11-10-2018 IPR004879 Domain of unknown function DUF255 YH65_02810 8fca8f1db3bbbe864bccfffbcc4913c3 644 SUPERFAMILY SSF52833 2 130 5.87E-31 T 11-10-2018 IPR036249 Thioredoxin-like superfamily YH65_02810 8fca8f1db3bbbe864bccfffbcc4913c3 644 Gene3D G3DSA:3.40.30.10 1 171 1.9E-67 T 11-10-2018 YH65_02810 8fca8f1db3bbbe864bccfffbcc4913c3 644 SUPERFAMILY SSF48208 184 509 1.29E-50 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 YH65_02810 8fca8f1db3bbbe864bccfffbcc4913c3 644 Gene3D G3DSA:1.50.10.20 212 335 8.2E-6 T 11-10-2018 YH65_02810 8fca8f1db3bbbe864bccfffbcc4913c3 644 PIRSF PIRSF006402 1 641 1.4E-193 T 11-10-2018 IPR024705 Spermatogenesis-associated protein 20 YH65_04140 deae34f30b94ddc63aecd9368fc18396 1197 SUPERFAMILY SSF52540 17 1175 6.26E-6 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_04140 deae34f30b94ddc63aecd9368fc18396 1197 Pfam PF12128 Protein of unknown function (DUF3584) 177 1177 1.5E-25 T 11-10-2018 IPR021979 Protein of unknown function DUF3584 YH65_03280 dc9fbf2a5a25219543b26132321a3b44 410 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 8 400 1.8E-147 T 11-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 YH65_03280 dc9fbf2a5a25219543b26132321a3b44 410 Gene3D G3DSA:3.40.605.10 13 405 2.7E-161 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 YH65_03280 dc9fbf2a5a25219543b26132321a3b44 410 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 1 410 39.085 T 11-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 YH65_03280 dc9fbf2a5a25219543b26132321a3b44 410 Pfam PF00171 Aldehyde dehydrogenase family 2 278 5.3E-14 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 YH65_03280 dc9fbf2a5a25219543b26132321a3b44 410 Gene3D G3DSA:3.40.309.10 221 368 2.7E-161 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 YH65_03280 dc9fbf2a5a25219543b26132321a3b44 410 SUPERFAMILY SSF53720 1 410 5.63E-111 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 YH65_03280 dc9fbf2a5a25219543b26132321a3b44 410 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 317 339 - T 11-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 YH65_03280 dc9fbf2a5a25219543b26132321a3b44 410 PIRSF PIRSF000151 1 410 7.1E-173 T 11-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 YH65_06140 91558e84a2ce4859b97f017a6f0ca3b6 787 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 362 509 1.9E-12 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 YH65_06140 91558e84a2ce4859b97f017a6f0ca3b6 787 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 244 256 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 YH65_06140 91558e84a2ce4859b97f017a6f0ca3b6 787 Gene3D G3DSA:1.20.140.10 362 509 1.3E-91 T 11-10-2018 YH65_06140 91558e84a2ce4859b97f017a6f0ca3b6 787 SUPERFAMILY SSF47203 362 509 1.48E-21 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 YH65_06140 91558e84a2ce4859b97f017a6f0ca3b6 787 Gene3D G3DSA:2.40.110.10 241 361 1.3E-91 T 11-10-2018 YH65_06140 91558e84a2ce4859b97f017a6f0ca3b6 787 Pfam PF09317 Domain of unknown function (DUF1974) 516 768 1.1E-64 T 11-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 YH65_06140 91558e84a2ce4859b97f017a6f0ca3b6 787 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 242 345 6.6E-14 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 YH65_06140 91558e84a2ce4859b97f017a6f0ca3b6 787 SUPERFAMILY SSF56645 122 357 3.66E-40 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 YH65_06140 91558e84a2ce4859b97f017a6f0ca3b6 787 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 131 237 2.2E-18 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 YH65_06140 91558e84a2ce4859b97f017a6f0ca3b6 787 Gene3D G3DSA:1.10.540.10 128 240 1.3E-91 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 YH65_02725 01cd4c5d1cea36b8ccab6a0b03bfa02e 132 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 131 3.5E-30 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type YH65_02725 01cd4c5d1cea36b8ccab6a0b03bfa02e 132 SUPERFAMILY SSF46785 6 131 8.99E-27 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YH65_02725 01cd4c5d1cea36b8ccab6a0b03bfa02e 132 Gene3D G3DSA:1.10.10.10 1 132 3.5E-29 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YH65_02725 01cd4c5d1cea36b8ccab6a0b03bfa02e 132 Pfam PF02082 Transcriptional regulator 1 80 5.5E-19 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type YH65_02110 d17f2f56427f99c704f3f6d9c20824d0 326 Gene3D G3DSA:3.10.310.30 200 320 1.0E-31 T 11-10-2018 YH65_02110 d17f2f56427f99c704f3f6d9c20824d0 326 SUPERFAMILY SSF64182 20 307 4.71E-57 T 11-10-2018 IPR038763 DHH phosphoesterase superfamily YH65_02110 d17f2f56427f99c704f3f6d9c20824d0 326 Pfam PF02272 DHHA1 domain 237 310 1.1E-12 T 11-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 YH65_02110 d17f2f56427f99c704f3f6d9c20824d0 326 Gene3D G3DSA:3.90.1640.10 8 199 3.0E-49 T 11-10-2018 YH65_02110 d17f2f56427f99c704f3f6d9c20824d0 326 Pfam PF01368 DHH family 22 156 1.5E-12 T 11-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 YH65_06785 efd5f7c202b2f0cd095cdaf2cf135a1d 321 SUPERFAMILY SSF52518 8 316 1.25E-84 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold YH65_06785 efd5f7c202b2f0cd095cdaf2cf135a1d 321 Gene3D G3DSA:3.40.50.970 1 320 1.0E-107 T 11-10-2018 YH65_06785 efd5f7c202b2f0cd095cdaf2cf135a1d 321 Pfam PF00676 Dehydrogenase E1 component 13 307 7.9E-71 T 11-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 YH65_04680 3a5ec8e2a0810519c0b7d47b62f06873 190 Gene3D G3DSA:3.30.230.40 88 190 6.3E-33 T 11-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 YH65_04680 3a5ec8e2a0810519c0b7d47b62f06873 190 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 1 190 36.43 T 11-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 YH65_04680 3a5ec8e2a0810519c0b7d47b62f06873 190 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 29 171 7.1E-58 T 11-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 YH65_04680 3a5ec8e2a0810519c0b7d47b62f06873 190 SUPERFAMILY SSF54211 3 80 9.99E-32 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold YH65_04680 3a5ec8e2a0810519c0b7d47b62f06873 190 SUPERFAMILY SSF54211 86 175 7.33E-29 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold YH65_04680 3a5ec8e2a0810519c0b7d47b62f06873 190 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 153 165 - T 11-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 YH65_04680 3a5ec8e2a0810519c0b7d47b62f06873 190 Gene3D G3DSA:3.30.230.40 1 87 2.8E-35 T 11-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 YH65_04680 3a5ec8e2a0810519c0b7d47b62f06873 190 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 59 72 - T 11-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 YH65_04055 09fab220b8627ef49783ed5f48bdd572 859 Gene3D G3DSA:3.40.630.10 1 298 3.8E-73 T 11-10-2018 YH65_04055 09fab220b8627ef49783ed5f48bdd572 859 Pfam PF00246 Zinc carboxypeptidase 13 265 1.5E-53 T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 YH65_04055 09fab220b8627ef49783ed5f48bdd572 859 Gene3D G3DSA:2.60.40.10 299 397 6.5E-10 T 11-10-2018 IPR013783 Immunoglobulin-like fold YH65_04055 09fab220b8627ef49783ed5f48bdd572 859 Gene3D G3DSA:2.60.40.10 763 854 4.7E-6 T 11-10-2018 IPR013783 Immunoglobulin-like fold YH65_04055 09fab220b8627ef49783ed5f48bdd572 859 SMART SM00060 300 379 6.1E-5 T 11-10-2018 IPR003961 Fibronectin type III GO:0005515 YH65_04055 09fab220b8627ef49783ed5f48bdd572 859 ProSitePatterns PS00132 Zinc carboxypeptidases, zinc-binding region 1 signature. 56 78 - T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 YH65_04055 09fab220b8627ef49783ed5f48bdd572 859 SUPERFAMILY SSF49265 298 398 4.76E-9 T 11-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 YH65_04055 09fab220b8627ef49783ed5f48bdd572 859 SMART SM00631 5 280 6.0E-47 T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 YH65_04055 09fab220b8627ef49783ed5f48bdd572 859 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 31 43 1.5E-8 T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 YH65_04055 09fab220b8627ef49783ed5f48bdd572 859 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 135 143 1.5E-8 T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 YH65_04055 09fab220b8627ef49783ed5f48bdd572 859 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 56 70 1.5E-8 T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 YH65_04055 09fab220b8627ef49783ed5f48bdd572 859 SUPERFAMILY SSF53187 3 291 8.6E-69 T 11-10-2018 YH65_04425 8e23115e82b51859b81041b9add4647b 66 Pfam PF09962 Uncharacterized conserved protein (DUF2196) 5 65 3.1E-30 T 11-10-2018 IPR019240 Protein of unknown function DUF2196 YH65_04425 8e23115e82b51859b81041b9add4647b 66 TIGRFAM TIGR03833 TIGR03833: conserved hypothetical protein 5 65 1.2E-31 T 11-10-2018 IPR019240 Protein of unknown function DUF2196 YH65_09295 2ce4b09adc1883eed21e5b082a0fe39a 153 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 6 131 1.0E-33 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 YH65_09295 2ce4b09adc1883eed21e5b082a0fe39a 153 Gene3D G3DSA:2.40.280.10 2 128 1.1E-46 T 11-10-2018 IPR023620 Small protein B YH65_09295 2ce4b09adc1883eed21e5b082a0fe39a 153 ProSitePatterns PS01317 SsrA-binding protein. 24 36 - T 11-10-2018 IPR020081 SsrA-binding protein, conserved site YH65_09295 2ce4b09adc1883eed21e5b082a0fe39a 153 TIGRFAM TIGR00086 smpB: SsrA-binding protein 6 149 7.3E-55 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 YH65_09295 2ce4b09adc1883eed21e5b082a0fe39a 153 Hamap MF_00023 SsrA-binding protein [smpB]. 1 153 64.218 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 YH65_09295 2ce4b09adc1883eed21e5b082a0fe39a 153 SUPERFAMILY SSF74982 3 131 2.35E-46 T 11-10-2018 IPR023620 Small protein B YH65_09295 2ce4b09adc1883eed21e5b082a0fe39a 153 Pfam PF01668 SmpB protein 6 150 9.4E-56 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 YH65_09980 d95783b9ee61cdc4c098067b55a1340b 444 SUPERFAMILY SSF51905 169 297 2.59E-26 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_09980 d95783b9ee61cdc4c098067b55a1340b 444 Gene3D G3DSA:3.50.50.60 51 362 5.7E-77 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_09980 d95783b9ee61cdc4c098067b55a1340b 444 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 51 153 2.7E-12 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YH65_09980 d95783b9ee61cdc4c098067b55a1340b 444 SUPERFAMILY SSF51905 51 369 1.64E-21 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_09980 d95783b9ee61cdc4c098067b55a1340b 444 Gene3D G3DSA:3.50.50.60 168 298 5.7E-77 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_03405 46be03d8f1df077d6f8c49265cebb045 250 SMART SM00852 8 171 3.6E-17 T 11-10-2018 IPR001453 MoaB/Mog domain YH65_03405 46be03d8f1df077d6f8c49265cebb045 250 SUPERFAMILY SSF53218 6 173 3.01E-21 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily YH65_03405 46be03d8f1df077d6f8c49265cebb045 250 Gene3D G3DSA:3.40.980.10 8 169 3.2E-31 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily YH65_03405 46be03d8f1df077d6f8c49265cebb045 250 Pfam PF00994 Probable molybdopterin binding domain 10 168 1.3E-20 T 11-10-2018 IPR001453 MoaB/Mog domain YH65_05830 1843f1329d96bd9f3796ff3affc05c99 145 SMART SM01235 10 141 1.4E-57 T 11-10-2018 IPR025992 Haem-binding domain YH65_05830 1843f1329d96bd9f3796ff3affc05c99 145 Pfam PF14376 Haem-binding domain 12 138 5.0E-40 T 11-10-2018 IPR025992 Haem-binding domain YH65_08620 6896b3cde852e469b144734a11714be9 145 SUPERFAMILY SSF75169 33 145 1.47E-27 T 11-10-2018 IPR027396 DsrEFH-like YH65_08620 6896b3cde852e469b144734a11714be9 145 Pfam PF02635 DsrE/DsrF-like family 46 145 7.9E-15 T 11-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein YH65_08620 6896b3cde852e469b144734a11714be9 145 Gene3D G3DSA:3.40.1260.10 31 145 1.8E-30 T 11-10-2018 IPR027396 DsrEFH-like YH65_08680 6896b3cde852e469b144734a11714be9 145 SUPERFAMILY SSF75169 33 145 1.47E-27 T 11-10-2018 IPR027396 DsrEFH-like YH65_08680 6896b3cde852e469b144734a11714be9 145 Pfam PF02635 DsrE/DsrF-like family 46 145 7.9E-15 T 11-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein YH65_08680 6896b3cde852e469b144734a11714be9 145 Gene3D G3DSA:3.40.1260.10 31 145 1.8E-30 T 11-10-2018 IPR027396 DsrEFH-like YH65_08650 6896b3cde852e469b144734a11714be9 145 SUPERFAMILY SSF75169 33 145 1.47E-27 T 11-10-2018 IPR027396 DsrEFH-like YH65_08650 6896b3cde852e469b144734a11714be9 145 Pfam PF02635 DsrE/DsrF-like family 46 145 7.9E-15 T 11-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein YH65_08650 6896b3cde852e469b144734a11714be9 145 Gene3D G3DSA:3.40.1260.10 31 145 1.8E-30 T 11-10-2018 IPR027396 DsrEFH-like YH65_06155 1b86bfa4789a5ce4cf94d67330dd6c28 250 Pfam PF13242 HAD-hyrolase-like 174 244 1.5E-20 T 11-10-2018 YH65_06155 1b86bfa4789a5ce4cf94d67330dd6c28 250 TIGRFAM TIGR01458 HAD-SF-IIA-hyp3: HAD hydrolase, TIGR01458 family 4 244 4.9E-65 T 11-10-2018 IPR006355 HAD hydrolase, LHPP/HDHD2 YH65_06155 1b86bfa4789a5ce4cf94d67330dd6c28 250 SUPERFAMILY SSF56784 3 247 2.43E-52 T 11-10-2018 IPR036412 HAD-like superfamily YH65_06155 1b86bfa4789a5ce4cf94d67330dd6c28 250 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 8 223 6.5E-33 T 11-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA YH65_06155 1b86bfa4789a5ce4cf94d67330dd6c28 250 Gene3D G3DSA:3.40.50.1000 75 178 4.4E-80 T 11-10-2018 IPR023214 HAD superfamily YH65_06155 1b86bfa4789a5ce4cf94d67330dd6c28 250 Gene3D G3DSA:3.40.50.1000 5 243 4.4E-80 T 11-10-2018 IPR023214 HAD superfamily YH65_06155 1b86bfa4789a5ce4cf94d67330dd6c28 250 Pfam PF13344 Haloacid dehalogenase-like hydrolase 7 90 5.2E-14 T 11-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA YH65_06155 1b86bfa4789a5ce4cf94d67330dd6c28 250 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 172 214 1.0E-6 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 YH65_02095 99bdc2793a0f0aaa9c21b054a3f4696d 207 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 5 207 4.5E-49 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 YH65_02095 99bdc2793a0f0aaa9c21b054a3f4696d 207 SMART SM01207 13 200 1.6E-67 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 YH65_02095 99bdc2793a0f0aaa9c21b054a3f4696d 207 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 10 207 17.641 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 YH65_02095 99bdc2793a0f0aaa9c21b054a3f4696d 207 Pfam PF02660 Glycerol-3-phosphate acyltransferase 15 199 6.8E-42 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 YH65_00125 4e2b39a0254a8fad13316e86e0024b88 147 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 13 33 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site YH65_00125 4e2b39a0254a8fad13316e86e0024b88 147 Pfam PF07963 Prokaryotic N-terminal methylation motif 12 34 4.4E-5 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site YH65_00125 4e2b39a0254a8fad13316e86e0024b88 147 Gene3D G3DSA:3.30.700.10 37 142 2.6E-30 T 11-10-2018 YH65_00125 4e2b39a0254a8fad13316e86e0024b88 147 SUPERFAMILY SSF54523 41 141 2.56E-24 T 11-10-2018 YH65_00125 4e2b39a0254a8fad13316e86e0024b88 147 Pfam PF08334 Type II secretion system (T2SS), protein G 38 141 4.9E-31 T 11-10-2018 IPR013545 Type II secretion system protein G YH65_00125 4e2b39a0254a8fad13316e86e0024b88 147 PRINTS PR00813 Bacterial general secretion pathway protein G signature 14 39 2.0E-13 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 YH65_00125 4e2b39a0254a8fad13316e86e0024b88 147 PRINTS PR00813 Bacterial general secretion pathway protein G signature 50 68 2.0E-13 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 YH65_00125 4e2b39a0254a8fad13316e86e0024b88 147 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 12 34 2.0E-6 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site YH65_00125 4e2b39a0254a8fad13316e86e0024b88 147 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 14 141 7.0E-40 T 11-10-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 YH65_03300 8c5f9f8099d22a1a85c36f54efd5cea7 314 PIRSF PIRSF000446 2 310 1.6E-70 T 11-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 YH65_03300 8c5f9f8099d22a1a85c36f54efd5cea7 314 SUPERFAMILY SSF55048 131 194 1.44E-11 T 11-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding YH65_03300 8c5f9f8099d22a1a85c36f54efd5cea7 314 Gene3D G3DSA:3.30.70.250 125 198 9.6E-80 T 11-10-2018 YH65_03300 8c5f9f8099d22a1a85c36f54efd5cea7 314 Gene3D G3DSA:3.40.366.10 6 284 9.6E-80 T 11-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 YH65_03300 8c5f9f8099d22a1a85c36f54efd5cea7 314 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 8 309 2.1E-18 T 11-10-2018 IPR020801 Polyketide synthase, acyl transferase domain YH65_03300 8c5f9f8099d22a1a85c36f54efd5cea7 314 SUPERFAMILY SSF52151 4 296 3.14E-54 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase YH65_03300 8c5f9f8099d22a1a85c36f54efd5cea7 314 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 4 290 2.0E-88 T 11-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 YH65_03300 8c5f9f8099d22a1a85c36f54efd5cea7 314 Pfam PF00698 Acyl transferase domain 7 276 7.3E-28 T 11-10-2018 IPR014043 Acyl transferase YH65_02180 d6bf1403bc71d594c73322060778c5dc 86 Hamap MF_00580 10 kDa chaperonin [groS]. 2 86 21.432 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 YH65_02180 d6bf1403bc71d594c73322060778c5dc 86 SUPERFAMILY SSF50129 1 85 1.0E-26 T 11-10-2018 IPR011032 GroES-like superfamily YH65_02180 d6bf1403bc71d594c73322060778c5dc 86 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 11-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 YH65_02180 d6bf1403bc71d594c73322060778c5dc 86 Gene3D G3DSA:2.30.33.40 1 85 1.5E-26 T 11-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 YH65_02180 d6bf1403bc71d594c73322060778c5dc 86 SMART SM00883 2 85 1.7E-43 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 YH65_02180 d6bf1403bc71d594c73322060778c5dc 86 Pfam PF00166 Chaperonin 10 Kd subunit 2 84 8.3E-27 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 YH65_02180 d6bf1403bc71d594c73322060778c5dc 86 PRINTS PR00297 10kDa chaperonin signature 51 63 1.4E-26 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 YH65_02180 d6bf1403bc71d594c73322060778c5dc 86 PRINTS PR00297 10kDa chaperonin signature 3 18 1.4E-26 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 YH65_02180 d6bf1403bc71d594c73322060778c5dc 86 PRINTS PR00297 10kDa chaperonin signature 72 85 1.4E-26 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 YH65_02180 d6bf1403bc71d594c73322060778c5dc 86 PRINTS PR00297 10kDa chaperonin signature 25 46 1.4E-26 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 YH65_11045 e1ae8fd7bf45e8a6bd8fcdecbb4ca89a 420 PRINTS PR00811 Bacterial general secretion pathway protein D signature 263 273 1.1E-8 T 11-10-2018 IPR001775 GspD/PilQ family YH65_11045 e1ae8fd7bf45e8a6bd8fcdecbb4ca89a 420 PRINTS PR00811 Bacterial general secretion pathway protein D signature 228 252 1.1E-8 T 11-10-2018 IPR001775 GspD/PilQ family YH65_11045 e1ae8fd7bf45e8a6bd8fcdecbb4ca89a 420 PRINTS PR00811 Bacterial general secretion pathway protein D signature 360 378 1.1E-8 T 11-10-2018 IPR001775 GspD/PilQ family YH65_11045 e1ae8fd7bf45e8a6bd8fcdecbb4ca89a 420 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 341 374 - T 11-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 YH65_11045 e1ae8fd7bf45e8a6bd8fcdecbb4ca89a 420 Pfam PF00263 Bacterial type II and III secretion system protein 233 390 5.1E-28 T 11-10-2018 IPR004846 Type II/III secretion system GO:0009306 YH65_11045 e1ae8fd7bf45e8a6bd8fcdecbb4ca89a 420 Gene3D G3DSA:3.55.50.30 32 116 6.9E-7 T 11-10-2018 YH65_08440 89e5596456c6f196f8cf7a22aaaa2799 436 SUPERFAMILY SSF56059 4 253 1.19E-32 T 11-10-2018 YH65_08440 89e5596456c6f196f8cf7a22aaaa2799 436 Gene3D G3DSA:3.40.50.261 262 422 2.1E-67 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 YH65_08440 89e5596456c6f196f8cf7a22aaaa2799 436 Pfam PF16114 ATP citrate lyase citrate-binding 260 435 2.7E-82 T 11-10-2018 IPR032263 ATP-citrate synthase, citrate-binding domain KEGG: 00020+2.3.3.8|KEGG: 00720+2.3.3.8|MetaCyc: PWY-5172|Reactome: R-HSA-163765|Reactome: R-HSA-6798695|Reactome: R-HSA-75105 YH65_08440 89e5596456c6f196f8cf7a22aaaa2799 436 SUPERFAMILY SSF52210 277 410 2.43E-17 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 YH65_08440 89e5596456c6f196f8cf7a22aaaa2799 436 Gene3D G3DSA:3.30.470.20 5 256 1.3E-73 T 11-10-2018 YH65_08440 89e5596456c6f196f8cf7a22aaaa2799 436 Gene3D G3DSA:3.30.1490.20 32 120 1.3E-73 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 YH65_08440 89e5596456c6f196f8cf7a22aaaa2799 436 Pfam PF08442 ATP-grasp domain 35 219 8.7E-9 T 11-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 YH65_00965 b33cc8850d8ccab616dc6580cf1df32f 285 Hamap MF_01694 Biotin synthase [bioB]. 2 279 32.647 T 11-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 YH65_00965 b33cc8850d8ccab616dc6580cf1df32f 285 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 190 277 1.5E-7 T 11-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 YH65_00965 b33cc8850d8ccab616dc6580cf1df32f 285 SUPERFAMILY SSF102114 9 277 4.84E-55 T 11-10-2018 YH65_00965 b33cc8850d8ccab616dc6580cf1df32f 285 TIGRFAM TIGR00433 bioB: biotin synthase 7 277 1.3E-83 T 11-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 YH65_00965 b33cc8850d8ccab616dc6580cf1df32f 285 Pfam PF04055 Radical SAM superfamily 18 175 1.8E-14 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 YH65_00965 b33cc8850d8ccab616dc6580cf1df32f 285 SMART SM00876 187 278 1.8E-13 T 11-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 YH65_00965 b33cc8850d8ccab616dc6580cf1df32f 285 SMART SM00729 10 215 8.4E-26 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 YH65_00965 b33cc8850d8ccab616dc6580cf1df32f 285 Gene3D G3DSA:3.20.20.70 3 280 3.2E-84 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YH65_00965 b33cc8850d8ccab616dc6580cf1df32f 285 PIRSF PIRSF001619 2 284 5.2E-80 T 11-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 YH65_00175 4a48bedff74b119952e49f81e8cac75e 157 Pfam PF08447 PAS fold 29 113 1.0E-9 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 YH65_00175 4a48bedff74b119952e49f81e8cac75e 157 SUPERFAMILY SSF55785 18 114 1.92E-21 T 11-10-2018 IPR035965 PAS domain superfamily YH65_00175 4a48bedff74b119952e49f81e8cac75e 157 Gene3D G3DSA:3.30.450.20 9 141 7.6E-19 T 11-10-2018 YH65_00175 4a48bedff74b119952e49f81e8cac75e 157 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 20 118 5.7E-10 T 11-10-2018 IPR000014 PAS domain YH65_10690 adc54c5fb233038f8f488ad0cef24cc4 333 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 1 317 28.092 T 11-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YH65_10690 adc54c5fb233038f8f488ad0cef24cc4 333 SUPERFAMILY SSF47789 251 317 1.83E-18 T 11-10-2018 YH65_10690 adc54c5fb233038f8f488ad0cef24cc4 333 Gene3D G3DSA:1.10.150.20 219 333 1.3E-24 T 11-10-2018 YH65_10690 adc54c5fb233038f8f488ad0cef24cc4 333 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 30 223 3.0E-11 T 11-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YH65_10690 adc54c5fb233038f8f488ad0cef24cc4 333 SUPERFAMILY SSF55257 10 227 3.27E-22 T 11-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YH65_10690 adc54c5fb233038f8f488ad0cef24cc4 333 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 243 306 3.6E-23 T 11-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YH65_10690 adc54c5fb233038f8f488ad0cef24cc4 333 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 309 1.1E-86 T 11-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YH65_10690 adc54c5fb233038f8f488ad0cef24cc4 333 SUPERFAMILY SSF56553 53 173 4.32E-30 T 11-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YH65_10690 adc54c5fb233038f8f488ad0cef24cc4 333 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 255 310 2.0E-14 T 11-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YH65_10690 adc54c5fb233038f8f488ad0cef24cc4 333 Gene3D G3DSA:2.170.120.12 53 172 1.4E-65 T 11-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YH65_10690 adc54c5fb233038f8f488ad0cef24cc4 333 Gene3D G3DSA:3.30.1360.10 16 215 1.4E-65 T 11-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YH65_10690 adc54c5fb233038f8f488ad0cef24cc4 333 SMART SM00662 23 229 5.8E-62 T 11-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YH65_10690 adc54c5fb233038f8f488ad0cef24cc4 333 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 62 155 1.3E-19 T 11-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YH65_07555 5e5bf24890b93d946407b46b7d171742 185 SUPERFAMILY SSF46929 140 182 5.36E-5 T 11-10-2018 IPR036267 RuvA, C-terminal domain superfamily YH65_07555 5e5bf24890b93d946407b46b7d171742 185 SMART SM00278 106 125 0.36 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 YH65_07555 5e5bf24890b93d946407b46b7d171742 185 SMART SM00278 71 90 270.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 YH65_07555 5e5bf24890b93d946407b46b7d171742 185 Gene3D G3DSA:1.10.150.20 65 135 2.6E-21 T 11-10-2018 YH65_07555 5e5bf24890b93d946407b46b7d171742 185 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 183 26.592 T 11-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 YH65_07555 5e5bf24890b93d946407b46b7d171742 185 Gene3D G3DSA:1.10.8.10 139 183 3.2E-6 T 11-10-2018 YH65_07555 5e5bf24890b93d946407b46b7d171742 185 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 182 2.8E-45 T 11-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 YH65_07555 5e5bf24890b93d946407b46b7d171742 185 SUPERFAMILY SSF50249 1 61 2.28E-10 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold YH65_07555 5e5bf24890b93d946407b46b7d171742 185 Pfam PF01330 RuvA N terminal domain 1 60 5.2E-14 T 11-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 YH65_07555 5e5bf24890b93d946407b46b7d171742 185 Pfam PF14520 Helix-hairpin-helix domain 70 128 4.5E-15 T 11-10-2018 YH65_07555 5e5bf24890b93d946407b46b7d171742 185 SUPERFAMILY SSF47781 63 130 3.24E-18 T 11-10-2018 IPR010994 RuvA domain 2-like YH65_07555 5e5bf24890b93d946407b46b7d171742 185 Gene3D G3DSA:2.40.50.140 1 64 1.2E-14 T 11-10-2018 YH65_07555 5e5bf24890b93d946407b46b7d171742 185 Pfam PF07499 RuvA, C-terminal domain 142 182 5.6E-9 T 11-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 YH65_07245 8158d32134ef0225cec36b9b61a7e2da 477 SMART SM00845 327 475 3.0E-75 T 11-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 YH65_07245 8158d32134ef0225cec36b9b61a7e2da 477 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 141 155 - T 11-10-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 YH65_07245 8158d32134ef0225cec36b9b61a7e2da 477 Pfam PF02934 GatB/GatE catalytic domain 4 289 7.1E-113 T 11-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 YH65_07245 8158d32134ef0225cec36b9b61a7e2da 477 Pfam PF02637 GatB domain 328 475 1.8E-49 T 11-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 YH65_07245 8158d32134ef0225cec36b9b61a7e2da 477 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 2 475 2.1E-180 T 11-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 YH65_07245 8158d32134ef0225cec36b9b61a7e2da 477 Gene3D G3DSA:1.10.150.380 296 414 1.3E-30 T 11-10-2018 YH65_07245 8158d32134ef0225cec36b9b61a7e2da 477 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 1 476 37.388 T 11-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 YH65_07245 8158d32134ef0225cec36b9b61a7e2da 477 SUPERFAMILY SSF89095 296 400 1.44E-29 T 11-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 YH65_07245 8158d32134ef0225cec36b9b61a7e2da 477 Gene3D G3DSA:1.10.10.410 415 477 6.6E-26 T 11-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal YH65_07245 8158d32134ef0225cec36b9b61a7e2da 477 SUPERFAMILY SSF55931 3 292 3.4E-118 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 YH65_09700 9809773e4adcf72e6b99ef559e918f02 255 Gene3D G3DSA:3.40.50.720 1 253 4.8E-57 T 11-10-2018 YH65_09700 9809773e4adcf72e6b99ef559e918f02 255 Pfam PF00106 short chain dehydrogenase 1 168 5.4E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YH65_09700 9809773e4adcf72e6b99ef559e918f02 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 55 66 4.8E-18 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YH65_09700 9809773e4adcf72e6b99ef559e918f02 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 166 4.8E-18 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YH65_09700 9809773e4adcf72e6b99ef559e918f02 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 102 118 4.8E-18 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YH65_09700 9809773e4adcf72e6b99ef559e918f02 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 147 4.8E-18 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YH65_09700 9809773e4adcf72e6b99ef559e918f02 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 108 116 3.2E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YH65_09700 9809773e4adcf72e6b99ef559e918f02 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 55 66 3.2E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YH65_09700 9809773e4adcf72e6b99ef559e918f02 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 147 3.2E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YH65_09700 9809773e4adcf72e6b99ef559e918f02 255 SUPERFAMILY SSF51735 1 213 2.21E-52 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily YH65_09700 9809773e4adcf72e6b99ef559e918f02 255 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 115 143 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 YH65_01070 f8e3b8ac0da6760e18b51b4dc512d3b0 462 Gene3D G3DSA:3.40.50.620 1 313 1.5E-126 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YH65_01070 f8e3b8ac0da6760e18b51b4dc512d3b0 462 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 304 3.2E-103 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 YH65_01070 f8e3b8ac0da6760e18b51b4dc512d3b0 462 PRINTS PR00987 Glutamyl-tRNA synthetase signature 194 202 4.0E-24 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 YH65_01070 f8e3b8ac0da6760e18b51b4dc512d3b0 462 PRINTS PR00987 Glutamyl-tRNA synthetase signature 34 47 4.0E-24 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 YH65_01070 f8e3b8ac0da6760e18b51b4dc512d3b0 462 PRINTS PR00987 Glutamyl-tRNA synthetase signature 19 30 4.0E-24 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 YH65_01070 f8e3b8ac0da6760e18b51b4dc512d3b0 462 PRINTS PR00987 Glutamyl-tRNA synthetase signature 178 188 4.0E-24 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 YH65_01070 f8e3b8ac0da6760e18b51b4dc512d3b0 462 PRINTS PR00987 Glutamyl-tRNA synthetase signature 5 17 4.0E-24 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 YH65_01070 f8e3b8ac0da6760e18b51b4dc512d3b0 462 Gene3D G3DSA:1.10.10.350 359 462 2.0E-18 T 11-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 YH65_01070 f8e3b8ac0da6760e18b51b4dc512d3b0 462 SUPERFAMILY SSF52374 2 294 6.44E-105 T 11-10-2018 YH65_01070 f8e3b8ac0da6760e18b51b4dc512d3b0 462 SUPERFAMILY SSF48163 298 458 1.7E-36 T 11-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 YH65_01070 f8e3b8ac0da6760e18b51b4dc512d3b0 462 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 8 19 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 YH65_01070 f8e3b8ac0da6760e18b51b4dc512d3b0 462 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 458 30.437 T 11-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 YH65_01070 f8e3b8ac0da6760e18b51b4dc512d3b0 462 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 456 1.3E-175 T 11-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 YH65_06955 02be3425100b368fa4baff87097e21c8 389 Gene3D G3DSA:3.40.640.10 61 283 3.4E-131 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 YH65_06955 02be3425100b368fa4baff87097e21c8 389 Gene3D G3DSA:3.90.1150.10 24 380 3.4E-131 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 YH65_06955 02be3425100b368fa4baff87097e21c8 389 SUPERFAMILY SSF53383 1 385 6.4E-115 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase YH65_06955 02be3425100b368fa4baff87097e21c8 389 Pfam PF00155 Aminotransferase class I and II 30 380 1.8E-69 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YH65_06715 1128232dab0e9e56ecc05fa3089028f2 542 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 34 164 1.5E-23 T 11-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal YH65_06715 1128232dab0e9e56ecc05fa3089028f2 542 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 167 512 6.4E-110 T 11-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 YH65_06715 1128232dab0e9e56ecc05fa3089028f2 542 PIRSF PIRSF001093 27 230 7.2E-37 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 YH65_06715 1128232dab0e9e56ecc05fa3089028f2 542 PIRSF PIRSF001093 234 541 2.4E-55 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 YH65_06715 1128232dab0e9e56ecc05fa3089028f2 542 PRINTS PR00738 Glycosyl hydrolase family 20 signature 476 492 1.2E-41 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 YH65_06715 1128232dab0e9e56ecc05fa3089028f2 542 PRINTS PR00738 Glycosyl hydrolase family 20 signature 190 211 1.2E-41 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 YH65_06715 1128232dab0e9e56ecc05fa3089028f2 542 PRINTS PR00738 Glycosyl hydrolase family 20 signature 336 349 1.2E-41 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 YH65_06715 1128232dab0e9e56ecc05fa3089028f2 542 PRINTS PR00738 Glycosyl hydrolase family 20 signature 117 137 1.2E-41 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 YH65_06715 1128232dab0e9e56ecc05fa3089028f2 542 PRINTS PR00738 Glycosyl hydrolase family 20 signature 314 332 1.2E-41 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 YH65_06715 1128232dab0e9e56ecc05fa3089028f2 542 PRINTS PR00738 Glycosyl hydrolase family 20 signature 265 282 1.2E-41 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 YH65_06715 1128232dab0e9e56ecc05fa3089028f2 542 PRINTS PR00738 Glycosyl hydrolase family 20 signature 494 511 1.2E-41 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 YH65_06715 1128232dab0e9e56ecc05fa3089028f2 542 Gene3D G3DSA:3.30.379.10 27 163 5.6E-28 T 11-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 YH65_06715 1128232dab0e9e56ecc05fa3089028f2 542 SUPERFAMILY SSF51445 167 525 4.21E-119 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily YH65_06715 1128232dab0e9e56ecc05fa3089028f2 542 Gene3D G3DSA:3.20.20.80 165 541 5.0E-135 T 11-10-2018 YH65_06715 1128232dab0e9e56ecc05fa3089028f2 542 SUPERFAMILY SSF55545 33 166 1.23E-24 T 11-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 YH65_02285 df30e13b553b9845267902330fa44202 175 PIRSF PIRSF004682 1 171 5.5E-59 T 11-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 YH65_02285 df30e13b553b9845267902330fa44202 175 SUPERFAMILY SSF56784 1 167 7.85E-42 T 11-10-2018 IPR036412 HAD-like superfamily YH65_02285 df30e13b553b9845267902330fa44202 175 Gene3D G3DSA:3.40.50.1000 1 170 8.6E-51 T 11-10-2018 IPR023214 HAD superfamily YH65_02285 df30e13b553b9845267902330fa44202 175 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 2 140 2.6E-43 T 11-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 YH65_02285 df30e13b553b9845267902330fa44202 175 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 2 138 5.7E-35 T 11-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 YH65_02285 df30e13b553b9845267902330fa44202 175 Pfam PF13242 HAD-hyrolase-like 97 138 1.6E-9 T 11-10-2018 YH65_02285 df30e13b553b9845267902330fa44202 175 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 2 148 2.0E-51 T 11-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 YH65_03745 67f2ccdb04ea532911bbcdb2869a4139 141 Pfam PF01618 MotA/TolQ/ExbB proton channel family 40 134 1.4E-25 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel YH65_03745 67f2ccdb04ea532911bbcdb2869a4139 141 TIGRFAM TIGR02805 exbB2: tonB-system energizer ExbB 1 134 1.2E-44 T 11-10-2018 IPR014172 TonB-system energizer ExbB type-2 GO:0016020|GO:0055085 YH65_00300 e60a31acdbb0d5b3102f1b388df5d3bd 592 Pfam PF00271 Helicase conserved C-terminal domain 216 321 5.5E-17 T 11-10-2018 IPR001650 Helicase, C-terminal YH65_00300 e60a31acdbb0d5b3102f1b388df5d3bd 592 Pfam PF16124 RecQ zinc-binding 334 394 5.3E-12 T 11-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain YH65_00300 e60a31acdbb0d5b3102f1b388df5d3bd 592 Gene3D G3DSA:1.10.150.80 515 592 1.3E-25 T 11-10-2018 YH65_00300 e60a31acdbb0d5b3102f1b388df5d3bd 592 Pfam PF00570 HRDC domain 524 589 1.8E-23 T 11-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 YH65_00300 e60a31acdbb0d5b3102f1b388df5d3bd 592 SUPERFAMILY SSF46785 397 526 1.27E-32 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YH65_00300 e60a31acdbb0d5b3102f1b388df5d3bd 592 SMART SM00341 520 591 6.5E-14 T 11-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 YH65_00300 e60a31acdbb0d5b3102f1b388df5d3bd 592 Pfam PF09382 RQC domain 399 505 1.1E-29 T 11-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 YH65_00300 e60a31acdbb0d5b3102f1b388df5d3bd 592 Gene3D G3DSA:3.40.50.300 200 331 3.6E-37 T 11-10-2018 YH65_00300 e60a31acdbb0d5b3102f1b388df5d3bd 592 SMART SM00487 12 206 9.0E-30 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain YH65_00300 e60a31acdbb0d5b3102f1b388df5d3bd 592 SUPERFAMILY SSF47819 521 590 6.73E-23 T 11-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 YH65_00300 e60a31acdbb0d5b3102f1b388df5d3bd 592 SMART SM00956 403 504 4.5E-39 T 11-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 YH65_00300 e60a31acdbb0d5b3102f1b388df5d3bd 592 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 5 589 3.2E-210 T 11-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 YH65_00300 e60a31acdbb0d5b3102f1b388df5d3bd 592 SMART SM00490 241 322 8.1E-25 T 11-10-2018 IPR001650 Helicase, C-terminal YH65_00300 e60a31acdbb0d5b3102f1b388df5d3bd 592 Gene3D G3DSA:3.40.50.300 1 198 1.0E-77 T 11-10-2018 YH65_00300 e60a31acdbb0d5b3102f1b388df5d3bd 592 Pfam PF00270 DEAD/DEAH box helicase 18 179 7.5E-21 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 YH65_00300 e60a31acdbb0d5b3102f1b388df5d3bd 592 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 6 454 1.1E-155 T 11-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 YH65_00300 e60a31acdbb0d5b3102f1b388df5d3bd 592 Gene3D G3DSA:1.10.10.10 332 512 5.8E-42 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YH65_00300 e60a31acdbb0d5b3102f1b388df5d3bd 592 SUPERFAMILY SSF52540 56 343 1.85E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_08745 631af420e7c108fcf812589a7c15f62e 368 Pfam PF14827 Double sensory domain of two-component sensor kinase 41 199 1.5E-10 T 11-10-2018 IPR029150 Double Cache domain 3 YH65_02405 45b664a57bf9dd07326b02578fc9d1eb 337 Gene3D G3DSA:3.90.25.10 193 328 1.8E-145 T 11-10-2018 YH65_02405 45b664a57bf9dd07326b02578fc9d1eb 337 SUPERFAMILY SSF51735 1 335 1.47E-98 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily YH65_02405 45b664a57bf9dd07326b02578fc9d1eb 337 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 323 1.5E-62 T 11-10-2018 IPR016040 NAD(P)-binding domain YH65_02405 45b664a57bf9dd07326b02578fc9d1eb 337 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 334 2.5E-142 T 11-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 YH65_02405 45b664a57bf9dd07326b02578fc9d1eb 337 Gene3D G3DSA:3.40.50.720 3 273 1.8E-145 T 11-10-2018 YH65_05155 1e2586b4812bd5f15cd3072d3879663f 649 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 9 497 2.3E-161 T 11-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 YH65_05155 1e2586b4812bd5f15cd3072d3879663f 649 Pfam PF01588 Putative tRNA binding domain 554 646 9.5E-28 T 11-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 YH65_05155 1e2586b4812bd5f15cd3072d3879663f 649 SUPERFAMILY SSF47323 353 510 4.14E-31 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 YH65_05155 1e2586b4812bd5f15cd3072d3879663f 649 Gene3D G3DSA:2.40.50.140 541 649 1.8E-33 T 11-10-2018 YH65_05155 1e2586b4812bd5f15cd3072d3879663f 649 SUPERFAMILY SSF52374 6 351 2.31E-112 T 11-10-2018 YH65_05155 1e2586b4812bd5f15cd3072d3879663f 649 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 10 136 6.4E-15 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 YH65_05155 1e2586b4812bd5f15cd3072d3879663f 649 PRINTS PR01041 Methionyl-tRNA synthetase signature 352 363 2.5E-34 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 YH65_05155 1e2586b4812bd5f15cd3072d3879663f 649 PRINTS PR01041 Methionyl-tRNA synthetase signature 260 275 2.5E-34 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 YH65_05155 1e2586b4812bd5f15cd3072d3879663f 649 PRINTS PR01041 Methionyl-tRNA synthetase signature 10 23 2.5E-34 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 YH65_05155 1e2586b4812bd5f15cd3072d3879663f 649 PRINTS PR01041 Methionyl-tRNA synthetase signature 229 240 2.5E-34 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 YH65_05155 1e2586b4812bd5f15cd3072d3879663f 649 PRINTS PR01041 Methionyl-tRNA synthetase signature 42 56 2.5E-34 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 YH65_05155 1e2586b4812bd5f15cd3072d3879663f 649 PRINTS PR01041 Methionyl-tRNA synthetase signature 90 101 2.5E-34 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 YH65_05155 1e2586b4812bd5f15cd3072d3879663f 649 Gene3D G3DSA:1.10.730.10 341 513 5.3E-34 T 11-10-2018 YH65_05155 1e2586b4812bd5f15cd3072d3879663f 649 Gene3D G3DSA:3.40.50.620 9 337 3.4E-150 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YH65_05155 1e2586b4812bd5f15cd3072d3879663f 649 Pfam PF09334 tRNA synthetases class I (M) 148 364 1.6E-65 T 11-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 YH65_05155 1e2586b4812bd5f15cd3072d3879663f 649 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 522 648 1.3E-38 T 11-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 YH65_05155 1e2586b4812bd5f15cd3072d3879663f 649 Gene3D G3DSA:2.170.220.10 119 231 3.4E-150 T 11-10-2018 YH65_05155 1e2586b4812bd5f15cd3072d3879663f 649 Hamap MF_01228 Methionine--tRNA ligase [metG]. 1 509 46.957 T 11-10-2018 IPR023457 Methionine-tRNA synthetase, type 2 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 YH65_05155 1e2586b4812bd5f15cd3072d3879663f 649 SUPERFAMILY SSF50249 547 648 1.84E-31 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold YH65_09860 272b454d91108002dd3a74950338ee70 313 Gene3D G3DSA:3.50.50.60 116 239 7.3E-114 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_09860 272b454d91108002dd3a74950338ee70 313 Gene3D G3DSA:3.50.50.60 3 304 7.3E-114 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_09860 272b454d91108002dd3a74950338ee70 313 SUPERFAMILY SSF51905 1 308 2.73E-43 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_09860 272b454d91108002dd3a74950338ee70 313 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 134 154 - T 11-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 YH65_09860 272b454d91108002dd3a74950338ee70 313 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 3 309 1.1E-105 T 11-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 YH65_09860 272b454d91108002dd3a74950338ee70 313 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 3 25 4.3E-56 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 YH65_09860 272b454d91108002dd3a74950338ee70 313 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 59 69 4.3E-56 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 YH65_09860 272b454d91108002dd3a74950338ee70 313 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 233 254 4.3E-56 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 YH65_09860 272b454d91108002dd3a74950338ee70 313 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 272 290 4.3E-56 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 YH65_09860 272b454d91108002dd3a74950338ee70 313 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 105 113 4.3E-56 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 YH65_09860 272b454d91108002dd3a74950338ee70 313 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 194 210 4.3E-56 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 YH65_09860 272b454d91108002dd3a74950338ee70 313 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 142 166 4.3E-56 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 YH65_09860 272b454d91108002dd3a74950338ee70 313 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 37 52 4.3E-56 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 YH65_09860 272b454d91108002dd3a74950338ee70 313 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 127 139 4.3E-56 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 YH65_09860 272b454d91108002dd3a74950338ee70 313 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 298 4.8E-44 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YH65_09860 272b454d91108002dd3a74950338ee70 313 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 2.1E-27 T 11-10-2018 YH65_09860 272b454d91108002dd3a74950338ee70 313 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 231 247 2.1E-27 T 11-10-2018 YH65_09860 272b454d91108002dd3a74950338ee70 313 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 146 164 2.1E-27 T 11-10-2018 YH65_09860 272b454d91108002dd3a74950338ee70 313 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 284 2.1E-27 T 11-10-2018 YH65_09860 272b454d91108002dd3a74950338ee70 313 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 104 122 2.1E-27 T 11-10-2018 YH65_09185 c0f253db34fe3cf03231b89cc3998e6e 385 Pfam PF00155 Aminotransferase class I and II 65 377 2.1E-33 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YH65_09185 c0f253db34fe3cf03231b89cc3998e6e 385 Gene3D G3DSA:3.90.1150.10 10 377 1.5E-135 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 YH65_09185 c0f253db34fe3cf03231b89cc3998e6e 385 SUPERFAMILY SSF53383 7 382 2.86E-85 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase YH65_09185 c0f253db34fe3cf03231b89cc3998e6e 385 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 4 381 9.7E-149 T 11-10-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 YH65_09185 c0f253db34fe3cf03231b89cc3998e6e 385 Gene3D G3DSA:3.40.640.10 65 285 1.5E-135 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 YH65_09315 bbb94e4cd4eb2836d9d84f892e0de153 227 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 227 79.127 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 YH65_09315 bbb94e4cd4eb2836d9d84f892e0de153 227 Gene3D G3DSA:3.40.1280.10 1 172 1.5E-63 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YH65_09315 bbb94e4cd4eb2836d9d84f892e0de153 227 Gene3D G3DSA:1.10.1270.20 173 227 4.9E-13 T 11-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 YH65_09315 bbb94e4cd4eb2836d9d84f892e0de153 227 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 220 3.4E-50 T 11-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 YH65_09315 bbb94e4cd4eb2836d9d84f892e0de153 227 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 225 1.8E-80 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 YH65_09315 bbb94e4cd4eb2836d9d84f892e0de153 227 PIRSF PIRSF000386 1 227 1.5E-81 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 YH65_09315 bbb94e4cd4eb2836d9d84f892e0de153 227 SUPERFAMILY SSF75217 1 225 6.54E-78 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases YH65_04855 d4e3c3ea2f4960c38f7c406aa5114645 372 SMART SM01204 214 352 1.6E-19 T 11-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 YH65_04855 d4e3c3ea2f4960c38f7c406aa5114645 372 SMART SM00897 26 213 5.4E-6 T 11-10-2018 IPR013702 FIST domain, N-terminal YH65_04855 d4e3c3ea2f4960c38f7c406aa5114645 372 Pfam PF08495 FIST N domain 52 212 1.4E-16 T 11-10-2018 IPR013702 FIST domain, N-terminal YH65_04855 d4e3c3ea2f4960c38f7c406aa5114645 372 Pfam PF10442 FIST C domain 214 350 4.6E-17 T 11-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 YH65_05200 b84d994863ca5dbd6c9fc10790deace9 91 Pfam PF02325 YGGT family 14 84 7.0E-20 T 11-10-2018 IPR003425 CCB3/YggT GO:0016020 YH65_06800 fc8343ba4f0190c7a7b1e2e618093938 583 SUPERFAMILY SSF56801 29 573 1.44E-149 T 11-10-2018 YH65_06800 fc8343ba4f0190c7a7b1e2e618093938 583 ProSitePatterns PS00455 Putative AMP-binding domain signature. 218 229 - T 11-10-2018 IPR020845 AMP-binding, conserved site YH65_06800 fc8343ba4f0190c7a7b1e2e618093938 583 Gene3D G3DSA:3.40.50.12780 18 467 2.4E-112 T 11-10-2018 YH65_06800 fc8343ba4f0190c7a7b1e2e618093938 583 Gene3D G3DSA:3.30.300.310 469 572 8.6E-25 T 11-10-2018 YH65_06800 fc8343ba4f0190c7a7b1e2e618093938 583 Pfam PF13193 AMP-binding enzyme C-terminal domain 482 560 4.6E-23 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain YH65_06800 fc8343ba4f0190c7a7b1e2e618093938 583 Pfam PF00501 AMP-binding enzyme 62 473 3.6E-87 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 YH65_01480 797f68da40bcb47ab20d30b51c1d5715 191 SUPERFAMILY SSF51182 1 185 2.31E-76 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily YH65_01480 797f68da40bcb47ab20d30b51c1d5715 191 Gene3D G3DSA:2.60.120.10 1 186 8.2E-72 T 11-10-2018 IPR014710 RmlC-like jelly roll fold YH65_01480 797f68da40bcb47ab20d30b51c1d5715 191 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 6 176 2.4E-71 T 11-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 YH65_01480 797f68da40bcb47ab20d30b51c1d5715 191 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 2 178 1.2E-69 T 11-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 YH65_01480 797f68da40bcb47ab20d30b51c1d5715 191 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 176 7.0E-59 T 11-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 YH65_10080 a7f6a6047dc6cbaa9fd977433d7c0f20 537 SUPERFAMILY SSF52540 5 250 3.99E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_10080 a7f6a6047dc6cbaa9fd977433d7c0f20 537 Pfam PF00005 ABC transporter 20 178 3.2E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YH65_10080 a7f6a6047dc6cbaa9fd977433d7c0f20 537 ProSitePatterns PS00211 ABC transporters family signature. 423 437 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YH65_10080 a7f6a6047dc6cbaa9fd977433d7c0f20 537 Pfam PF00005 ABC transporter 298 451 1.1E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YH65_10080 a7f6a6047dc6cbaa9fd977433d7c0f20 537 Gene3D G3DSA:3.40.50.300 269 537 1.2E-86 T 11-10-2018 YH65_10080 a7f6a6047dc6cbaa9fd977433d7c0f20 537 Gene3D G3DSA:3.40.50.300 1 268 7.9E-82 T 11-10-2018 YH65_10080 a7f6a6047dc6cbaa9fd977433d7c0f20 537 SUPERFAMILY SSF52540 270 522 1.16E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_10080 a7f6a6047dc6cbaa9fd977433d7c0f20 537 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YH65_10080 a7f6a6047dc6cbaa9fd977433d7c0f20 537 SMART SM00382 306 500 1.6E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain YH65_10080 a7f6a6047dc6cbaa9fd977433d7c0f20 537 SMART SM00382 29 228 1.4E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain YH65_10080 a7f6a6047dc6cbaa9fd977433d7c0f20 537 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 230 264 7.9E-5 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 YH65_10080 a7f6a6047dc6cbaa9fd977433d7c0f20 537 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 502 529 7.3E-6 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 YH65_09415 a3bb80a0d7e1ea3d9f1af34dfe8dc7bd 368 Gene3D G3DSA:3.40.640.10 39 273 3.2E-80 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 YH65_09415 a3bb80a0d7e1ea3d9f1af34dfe8dc7bd 368 Gene3D G3DSA:3.90.1150.10 28 335 3.2E-80 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 YH65_09415 a3bb80a0d7e1ea3d9f1af34dfe8dc7bd 368 Pfam PF00155 Aminotransferase class I and II 24 356 5.9E-30 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YH65_09415 a3bb80a0d7e1ea3d9f1af34dfe8dc7bd 368 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 220 229 - T 11-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 YH65_09415 a3bb80a0d7e1ea3d9f1af34dfe8dc7bd 368 SUPERFAMILY SSF53383 14 360 4.21E-64 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase YH65_03410 6b813302906ac0d494f5bd93f434a1a4 626 SUPERFAMILY SSF55073 244 369 5.02E-21 T 11-10-2018 IPR029787 Nucleotide cyclase YH65_03410 6b813302906ac0d494f5bd93f434a1a4 626 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 218 371 4.1E-23 T 11-10-2018 IPR000160 GGDEF domain YH65_03410 6b813302906ac0d494f5bd93f434a1a4 626 SUPERFAMILY SSF141868 386 624 1.29E-55 T 11-10-2018 IPR035919 EAL domain superfamily YH65_03410 6b813302906ac0d494f5bd93f434a1a4 626 Gene3D G3DSA:3.30.70.270 215 377 9.1E-25 T 11-10-2018 YH65_03410 6b813302906ac0d494f5bd93f434a1a4 626 Pfam PF00990 Diguanylate cyclase, GGDEF domain 244 367 4.0E-17 T 11-10-2018 IPR000160 GGDEF domain YH65_03410 6b813302906ac0d494f5bd93f434a1a4 626 SMART SM00267 208 372 5.5E-14 T 11-10-2018 IPR000160 GGDEF domain YH65_03410 6b813302906ac0d494f5bd93f434a1a4 626 SMART SM00052 380 624 2.4E-39 T 11-10-2018 IPR001633 EAL domain YH65_03410 6b813302906ac0d494f5bd93f434a1a4 626 Gene3D G3DSA:3.20.20.450 381 626 1.0E-57 T 11-10-2018 IPR035919 EAL domain superfamily YH65_03410 6b813302906ac0d494f5bd93f434a1a4 626 Pfam PF00563 EAL domain 387 619 2.5E-51 T 11-10-2018 IPR001633 EAL domain YH65_07720 71b2946b2f536bec54a478b32f8a1648 459 Gene3D G3DSA:3.40.50.150 34 260 4.8E-47 T 11-10-2018 YH65_07720 71b2946b2f536bec54a478b32f8a1648 459 Gene3D G3DSA:3.40.50.150 261 420 2.2E-19 T 11-10-2018 YH65_07720 71b2946b2f536bec54a478b32f8a1648 459 Pfam PF13847 Methyltransferase domain 67 182 3.4E-27 T 11-10-2018 IPR025714 Methyltransferase domain YH65_07720 71b2946b2f536bec54a478b32f8a1648 459 Pfam PF13649 Methyltransferase domain 300 395 4.8E-9 T 11-10-2018 YH65_07720 71b2946b2f536bec54a478b32f8a1648 459 SUPERFAMILY SSF53335 261 411 6.04E-22 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YH65_07720 71b2946b2f536bec54a478b32f8a1648 459 SUPERFAMILY SSF53335 10 237 2.13E-38 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YH65_05820 eb74ad7249ca132aafe9a43d177f964d 329 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 210 221 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YH65_05820 eb74ad7249ca132aafe9a43d177f964d 329 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 58 66 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 YH65_05820 eb74ad7249ca132aafe9a43d177f964d 329 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 8 115 5.4E-27 T 11-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 YH65_05820 eb74ad7249ca132aafe9a43d177f964d 329 SUPERFAMILY SSF54292 5 110 2.1E-24 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 YH65_05820 eb74ad7249ca132aafe9a43d177f964d 329 Gene3D G3DSA:1.10.1060.10 111 242 1.5E-37 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 YH65_05820 eb74ad7249ca132aafe9a43d177f964d 329 SUPERFAMILY SSF46548 113 239 7.32E-32 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 YH65_05820 eb74ad7249ca132aafe9a43d177f964d 329 Pfam PF13183 4Fe-4S dicluster domain 151 224 2.7E-10 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YH65_05820 eb74ad7249ca132aafe9a43d177f964d 329 Gene3D G3DSA:3.10.20.30 1 109 1.6E-27 T 11-10-2018 IPR012675 Beta-grasp domain superfamily YH65_05820 eb74ad7249ca132aafe9a43d177f964d 329 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 153 164 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YH65_05820 eb74ad7249ca132aafe9a43d177f964d 329 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 13 233 1.9E-68 T 11-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 YH65_10225 4f0bbd390f06a4e510ccb708edb6a5f0 648 Pfam PF00535 Glycosyl transferase family 2 405 531 1.7E-17 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 YH65_10225 4f0bbd390f06a4e510ccb708edb6a5f0 648 SUPERFAMILY SSF53448 402 611 5.14E-37 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YH65_10225 4f0bbd390f06a4e510ccb708edb6a5f0 648 Gene3D G3DSA:3.40.50.10320 180 394 9.7E-47 T 11-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 YH65_10225 4f0bbd390f06a4e510ccb708edb6a5f0 648 Pfam PF02585 GlcNAc-PI de-N-acetylase 182 297 1.3E-23 T 11-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 YH65_10225 4f0bbd390f06a4e510ccb708edb6a5f0 648 SUPERFAMILY SSF102588 181 374 7.72E-42 T 11-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 YH65_10225 4f0bbd390f06a4e510ccb708edb6a5f0 648 Gene3D G3DSA:3.90.550.10 402 625 4.1E-30 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YH65_06605 40663127924d079854b228f317d3e76d 247 Pfam PF01925 Sulfite exporter TauE/SafE 5 236 6.0E-42 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 YH65_09640 6613c00f33c3436c31b7d0bd0b5970ec 546 Pfam PF00005 ABC transporter 322 466 8.7E-26 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YH65_09640 6613c00f33c3436c31b7d0bd0b5970ec 546 SUPERFAMILY SSF52540 4 230 7.93E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_09640 6613c00f33c3436c31b7d0bd0b5970ec 546 Gene3D G3DSA:3.40.50.300 294 541 4.0E-62 T 11-10-2018 YH65_09640 6613c00f33c3436c31b7d0bd0b5970ec 546 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YH65_09640 6613c00f33c3436c31b7d0bd0b5970ec 546 SUPERFAMILY SSF52540 303 527 3.77E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_09640 6613c00f33c3436c31b7d0bd0b5970ec 546 Gene3D G3DSA:3.40.50.300 3 274 1.1E-51 T 11-10-2018 YH65_09640 6613c00f33c3436c31b7d0bd0b5970ec 546 Pfam PF00005 ABC transporter 20 166 3.7E-22 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YH65_09640 6613c00f33c3436c31b7d0bd0b5970ec 546 SMART SM00382 329 514 5.8E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain YH65_09640 6613c00f33c3436c31b7d0bd0b5970ec 546 SMART SM00382 28 215 2.7E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain YH65_09220 15b5e51554388cd5ff764340a3b8462c 102 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 3 50 7.0E-12 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor YH65_09220 15b5e51554388cd5ff764340a3b8462c 102 Pfam PF01809 Haemolytic domain 4 49 7.5E-14 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor YH65_09220 15b5e51554388cd5ff764340a3b8462c 102 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 2 50 1.5E-16 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor YH65_09220 15b5e51554388cd5ff764340a3b8462c 102 SMART SM01234 1 50 3.0E-7 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor YH65_04700 4000de3df5bb26dcc1a260102e3559aa 206 Pfam PF01926 50S ribosome-binding GTPase 28 156 1.4E-17 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 YH65_04700 4000de3df5bb26dcc1a260102e3559aa 206 Gene3D G3DSA:3.40.50.300 3 202 1.2E-40 T 11-10-2018 YH65_04700 4000de3df5bb26dcc1a260102e3559aa 206 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 9 175 1.3E-49 T 11-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 YH65_04700 4000de3df5bb26dcc1a260102e3559aa 206 SUPERFAMILY SSF52540 12 197 8.33E-28 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_04700 4000de3df5bb26dcc1a260102e3559aa 206 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 14 197 26.065 T 11-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 YH65_05015 0ebb21f2dd9873d9371467181cdef849 409 SUPERFAMILY SSF53686 17 401 1.7E-142 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme YH65_05015 0ebb21f2dd9873d9371467181cdef849 409 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 94 108 - T 11-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 YH65_05015 0ebb21f2dd9873d9371467181cdef849 409 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 67 390 4.9E-45 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme YH65_05015 0ebb21f2dd9873d9371467181cdef849 409 PIRSF PIRSF001413 6 409 3.6E-163 T 11-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 YH65_05015 0ebb21f2dd9873d9371467181cdef849 409 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 16 403 51.515 T 11-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 YH65_05015 0ebb21f2dd9873d9371467181cdef849 409 Gene3D G3DSA:3.40.50.1100 68 396 4.6E-178 T 11-10-2018 YH65_05015 0ebb21f2dd9873d9371467181cdef849 409 Gene3D G3DSA:3.40.50.1100 24 219 4.6E-178 T 11-10-2018 YH65_05015 0ebb21f2dd9873d9371467181cdef849 409 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 21 401 3.0E-187 T 11-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 YH65_09995 8133712ddba118f5a48ef03e6d604e8c 252 SUPERFAMILY SSF102114 25 209 1.61E-8 T 11-10-2018 YH65_09995 8133712ddba118f5a48ef03e6d604e8c 252 Pfam PF13394 4Fe-4S single cluster domain 23 155 1.7E-27 T 11-10-2018 YH65_09995 8133712ddba118f5a48ef03e6d604e8c 252 Gene3D G3DSA:3.20.20.70 1 243 2.1E-31 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YH65_09995 8133712ddba118f5a48ef03e6d604e8c 252 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 2 249 35.141 T 11-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 YH65_06215 7c00ca0f1fe777cd4f449a57a4a49525 705 SUPERFAMILY SSF48179 611 701 6.12E-22 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 YH65_06215 7c00ca0f1fe777cd4f449a57a4a49525 705 SUPERFAMILY SSF48179 494 594 3.15E-28 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 YH65_06215 7c00ca0f1fe777cd4f449a57a4a49525 705 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 314 491 1.3E-57 T 11-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 YH65_06215 7c00ca0f1fe777cd4f449a57a4a49525 705 SUPERFAMILY SSF51735 310 491 1.11E-49 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily YH65_06215 7c00ca0f1fe777cd4f449a57a4a49525 705 Gene3D G3DSA:1.10.1040.50 497 696 2.6E-67 T 11-10-2018 YH65_06215 7c00ca0f1fe777cd4f449a57a4a49525 705 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 494 585 3.3E-27 T 11-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 YH65_06215 7c00ca0f1fe777cd4f449a57a4a49525 705 Gene3D G3DSA:3.90.226.10 1 303 2.9E-87 T 11-10-2018 YH65_06215 7c00ca0f1fe777cd4f449a57a4a49525 705 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 491 516 - T 11-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 YH65_06215 7c00ca0f1fe777cd4f449a57a4a49525 705 Gene3D G3DSA:3.40.50.720 304 496 1.4E-60 T 11-10-2018 YH65_06215 7c00ca0f1fe777cd4f449a57a4a49525 705 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 205 9.4E-35 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 YH65_06215 7c00ca0f1fe777cd4f449a57a4a49525 705 SUPERFAMILY SSF52096 2 300 7.66E-64 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily YH65_09205 6bd72c02d412fcd7b58d88f9653b5493 526 PRINTS PR00702 Acriflavin resistance protein family signature 351 374 8.2E-7 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_09205 6bd72c02d412fcd7b58d88f9653b5493 526 PRINTS PR00702 Acriflavin resistance protein family signature 479 502 8.2E-7 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_09205 6bd72c02d412fcd7b58d88f9653b5493 526 PRINTS PR00702 Acriflavin resistance protein family signature 404 428 8.2E-7 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_09205 6bd72c02d412fcd7b58d88f9653b5493 526 Gene3D G3DSA:1.20.1640.10 350 511 1.5E-11 T 11-10-2018 YH65_09205 6bd72c02d412fcd7b58d88f9653b5493 526 Gene3D G3DSA:3.30.1360.200 194 333 4.0E-57 T 11-10-2018 YH65_09205 6bd72c02d412fcd7b58d88f9653b5493 526 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 265 495 3.5E-82 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial YH65_09205 6bd72c02d412fcd7b58d88f9653b5493 526 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 37 500 2.5E-144 T 11-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 YH65_09205 6bd72c02d412fcd7b58d88f9653b5493 526 Gene3D G3DSA:3.30.70.3400 132 338 4.0E-57 T 11-10-2018 YH65_09205 6bd72c02d412fcd7b58d88f9653b5493 526 SUPERFAMILY SSF82866 312 511 3.92E-45 T 11-10-2018 YH65_09205 6bd72c02d412fcd7b58d88f9653b5493 526 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 1 517 41.358 T 11-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 YH65_09205 6bd72c02d412fcd7b58d88f9653b5493 526 Pfam PF02355 Protein export membrane protein 339 505 3.2E-18 T 11-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial YH65_09600 d8d69f2e26e660401dfebedc03242009 233 Gene3D G3DSA:2.60.120.1460 1 207 9.4E-40 T 11-10-2018 YH65_09600 d8d69f2e26e660401dfebedc03242009 233 SUPERFAMILY SSF46785 158 211 2.14E-13 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YH65_09600 d8d69f2e26e660401dfebedc03242009 233 SMART SM00100 9 126 4.6E-6 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain YH65_09600 d8d69f2e26e660401dfebedc03242009 233 SMART SM00419 150 202 1.7E-10 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 YH65_09600 d8d69f2e26e660401dfebedc03242009 233 Pfam PF13545 Crp-like helix-turn-helix domain 161 208 7.5E-15 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 YH65_09600 d8d69f2e26e660401dfebedc03242009 233 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 160 176 3.0E-5 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 YH65_09600 d8d69f2e26e660401dfebedc03242009 233 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 176 191 3.0E-5 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 YH65_09600 d8d69f2e26e660401dfebedc03242009 233 SUPERFAMILY SSF51206 4 132 9.17E-25 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like YH65_09600 d8d69f2e26e660401dfebedc03242009 233 Pfam PF00027 Cyclic nucleotide-binding domain 28 107 2.7E-14 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain YH65_09310 23e77ba28bb7c42486d69c4f98e555fa 119 SUPERFAMILY SSF50104 2 118 1.1E-42 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily YH65_09310 23e77ba28bb7c42486d69c4f98e555fa 119 Gene3D G3DSA:2.30.30.790 3 119 1.2E-17 T 11-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_09310 23e77ba28bb7c42486d69c4f98e555fa 119 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 4 116 2.6E-47 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_09310 23e77ba28bb7c42486d69c4f98e555fa 119 Pfam PF01245 Ribosomal protein L19 5 115 1.6E-45 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_09310 23e77ba28bb7c42486d69c4f98e555fa 119 ProSitePatterns PS01015 Ribosomal protein L19 signature. 89 104 - T 11-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YH65_09310 23e77ba28bb7c42486d69c4f98e555fa 119 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 3 117 31.576 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_09310 23e77ba28bb7c42486d69c4f98e555fa 119 PRINTS PR00061 Ribosomal protein L19 signature 36 65 3.3E-36 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_09310 23e77ba28bb7c42486d69c4f98e555fa 119 PRINTS PR00061 Ribosomal protein L19 signature 6 35 3.3E-36 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_09310 23e77ba28bb7c42486d69c4f98e555fa 119 PRINTS PR00061 Ribosomal protein L19 signature 91 116 3.3E-36 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_09310 23e77ba28bb7c42486d69c4f98e555fa 119 PIRSF PIRSF002191 1 119 8.2E-47 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_04550 986f52b614a6672c0003605fc50325a1 153 Gene3D G3DSA:3.10.450.50 1 151 5.0E-47 T 11-10-2018 YH65_04550 986f52b614a6672c0003605fc50325a1 153 Pfam PF02810 SEC-C motif 131 148 1.6E-9 T 11-10-2018 IPR004027 SEC-C motif YH65_04550 986f52b614a6672c0003605fc50325a1 153 SUPERFAMILY SSF103642 128 149 1.96E-7 T 11-10-2018 YH65_04550 986f52b614a6672c0003605fc50325a1 153 SUPERFAMILY SSF54427 25 122 6.57E-31 T 11-10-2018 IPR032710 NTF2-like domain superfamily YH65_02815 b736cd20b00af5444d83b0076d6b5fd4 589 Pfam PF13098 Thioredoxin-like domain 490 584 6.8E-12 T 11-10-2018 IPR012336 Thioredoxin-like fold YH65_02815 b736cd20b00af5444d83b0076d6b5fd4 589 Gene3D G3DSA:3.40.30.10 469 588 1.9E-27 T 11-10-2018 YH65_02815 b736cd20b00af5444d83b0076d6b5fd4 589 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 177 386 7.4E-20 T 11-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 YH65_02815 b736cd20b00af5444d83b0076d6b5fd4 589 SUPERFAMILY SSF52833 485 586 2.56E-20 T 11-10-2018 IPR036249 Thioredoxin-like superfamily YH65_02815 b736cd20b00af5444d83b0076d6b5fd4 589 Gene3D G3DSA:2.60.40.1250 21 143 2.4E-16 T 11-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily YH65_02815 b736cd20b00af5444d83b0076d6b5fd4 589 Pfam PF11412 Disulphide bond corrector protein DsbC 26 137 1.2E-16 T 11-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain YH65_02815 b736cd20b00af5444d83b0076d6b5fd4 589 SUPERFAMILY SSF74863 24 137 1.7E-16 T 11-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily YH65_03825 02b965f0344fd3dc9535ed3708b9e042 310 Pfam PF01699 Sodium/calcium exchanger protein 3 143 7.8E-29 T 11-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 YH65_03825 02b965f0344fd3dc9535ed3708b9e042 310 Pfam PF01699 Sodium/calcium exchanger protein 170 303 9.2E-25 T 11-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 YH65_03825 02b965f0344fd3dc9535ed3708b9e042 310 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 3 301 2.2E-66 T 11-10-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 YH65_03825 02b965f0344fd3dc9535ed3708b9e042 310 Gene3D G3DSA:1.20.58.1130 6 199 7.4E-75 T 11-10-2018 YH65_03825 02b965f0344fd3dc9535ed3708b9e042 310 Gene3D G3DSA:1.20.1420.30 33 298 7.4E-75 T 11-10-2018 YH65_08315 cbd2b3391f25ec09e0efb06af7ace196 186 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 4 179 1.0E-54 T 11-10-2018 IPR006287 Protein/nucleic acid deglycase DJ-1 Reactome: R-HSA-3899300 YH65_08315 cbd2b3391f25ec09e0efb06af7ace196 186 SUPERFAMILY SSF52317 1 183 2.82E-43 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like YH65_08315 cbd2b3391f25ec09e0efb06af7ace196 186 Gene3D G3DSA:3.40.50.880 1 184 1.2E-49 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like YH65_08315 cbd2b3391f25ec09e0efb06af7ace196 186 Pfam PF01965 DJ-1/PfpI family 3 166 8.7E-39 T 11-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 YH65_05415 9f9f583f8a1cd1dd9523ff649b399176 187 SUPERFAMILY SSF140478 25 173 8.89E-54 T 11-10-2018 IPR023353 LemA-like domain superfamily YH65_05415 9f9f583f8a1cd1dd9523ff649b399176 187 Pfam PF04011 LemA family 8 180 1.2E-64 T 11-10-2018 IPR007156 LemA YH65_05415 9f9f583f8a1cd1dd9523ff649b399176 187 Gene3D G3DSA:1.20.1440.20 14 186 5.7E-60 T 11-10-2018 IPR023353 LemA-like domain superfamily YH65_03700 fdfdb5cc987301e382f4dbfd400b00e6 399 SUPERFAMILY SSF50998 84 382 7.06E-12 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily YH65_03700 fdfdb5cc987301e382f4dbfd400b00e6 399 Gene3D G3DSA:2.130.10.10 36 389 2.3E-12 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 YH65_03700 fdfdb5cc987301e382f4dbfd400b00e6 399 Pfam PF17164 Domain of unknown function (DUF5122) beta-propeller 216 244 0.011 T 11-10-2018 IPR013431 Delta-60 repeat YH65_06460 2f5b705b11fcc8a6f7d37f06fa535774 265 SMART SM00382 99 234 2.3E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain YH65_06460 2f5b705b11fcc8a6f7d37f06fa535774 265 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 103 116 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YH65_06460 2f5b705b11fcc8a6f7d37f06fa535774 265 Pfam PF01695 IstB-like ATP binding protein 55 233 8.4E-62 T 11-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 YH65_06460 2f5b705b11fcc8a6f7d37f06fa535774 265 Gene3D G3DSA:3.40.50.300 63 251 8.4E-50 T 11-10-2018 YH65_06460 2f5b705b11fcc8a6f7d37f06fa535774 265 PIRSF PIRSF003073 1 254 2.5E-79 T 11-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YH65_06460 2f5b705b11fcc8a6f7d37f06fa535774 265 SUPERFAMILY SSF52540 67 231 6.69E-24 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_02435 bbf9094d19f040378a874f675b87bb13 441 SMART SM00959 31 73 6.3E-14 T 11-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 YH65_02435 bbf9094d19f040378a874f675b87bb13 441 Pfam PF07497 Rho termination factor, RNA-binding domain 78 151 1.3E-29 T 11-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 YH65_02435 bbf9094d19f040378a874f675b87bb13 441 Gene3D G3DSA:1.10.720.10 28 72 1.1E-13 T 11-10-2018 YH65_02435 bbf9094d19f040378a874f675b87bb13 441 SMART SM00357 78 144 1.6E-17 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 YH65_02435 bbf9094d19f040378a874f675b87bb13 441 Hamap MF_01884 Transcription termination factor Rho [rho]. 23 441 214.902 T 11-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 YH65_02435 bbf9094d19f040378a874f675b87bb13 441 SUPERFAMILY SSF52540 117 394 2.49E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_02435 bbf9094d19f040378a874f675b87bb13 441 SUPERFAMILY SSF50249 75 151 9.0E-25 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold YH65_02435 bbf9094d19f040378a874f675b87bb13 441 Gene3D G3DSA:3.40.50.300 157 440 1.2E-124 T 11-10-2018 YH65_02435 bbf9094d19f040378a874f675b87bb13 441 SUPERFAMILY SSF68912 27 73 2.79E-10 T 11-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily YH65_02435 bbf9094d19f040378a874f675b87bb13 441 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 183 386 2.1E-21 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 YH65_02435 bbf9094d19f040378a874f675b87bb13 441 Gene3D G3DSA:2.40.50.140 73 149 1.1E-30 T 11-10-2018 YH65_02435 bbf9094d19f040378a874f675b87bb13 441 SMART SM00382 193 387 7.1E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain YH65_02435 bbf9094d19f040378a874f675b87bb13 441 Pfam PF07498 Rho termination factor, N-terminal domain 31 73 9.6E-14 T 11-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 YH65_02435 bbf9094d19f040378a874f675b87bb13 441 TIGRFAM TIGR00767 rho: transcription termination factor Rho 28 441 4.3E-208 T 11-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 YH65_03680 97673058b9f027333f68a54ae9968d2a 296 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 14 190 4.9E-39 T 11-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 YH65_03680 97673058b9f027333f68a54ae9968d2a 296 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 203 290 1.9E-8 T 11-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 YH65_03680 97673058b9f027333f68a54ae9968d2a 296 SUPERFAMILY SSF52540 41 160 7.08E-7 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_03680 97673058b9f027333f68a54ae9968d2a 296 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 15 190 5.1E-33 T 11-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 YH65_03680 97673058b9f027333f68a54ae9968d2a 296 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 2 292 23.462 T 11-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 YH65_07565 9561a00b0c80a46731bb298284f8e069 468 PRINTS PR01806 Virulence factor MviN signature 148 169 1.4E-50 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ YH65_07565 9561a00b0c80a46731bb298284f8e069 468 PRINTS PR01806 Virulence factor MviN signature 51 67 1.4E-50 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ YH65_07565 9561a00b0c80a46731bb298284f8e069 468 PRINTS PR01806 Virulence factor MviN signature 124 148 1.4E-50 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ YH65_07565 9561a00b0c80a46731bb298284f8e069 468 PRINTS PR01806 Virulence factor MviN signature 408 425 1.4E-50 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ YH65_07565 9561a00b0c80a46731bb298284f8e069 468 PRINTS PR01806 Virulence factor MviN signature 356 375 1.4E-50 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ YH65_07565 9561a00b0c80a46731bb298284f8e069 468 PRINTS PR01806 Virulence factor MviN signature 258 284 1.4E-50 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ YH65_07565 9561a00b0c80a46731bb298284f8e069 468 PRINTS PR01806 Virulence factor MviN signature 32 51 1.4E-50 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ YH65_07565 9561a00b0c80a46731bb298284f8e069 468 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 2 464 16.442 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ YH65_07565 9561a00b0c80a46731bb298284f8e069 468 Pfam PF03023 MviN-like protein 27 461 2.7E-101 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ YH65_07565 9561a00b0c80a46731bb298284f8e069 468 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 4 463 6.2E-107 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ YH65_00195 0fc586c46ea88f740628023ad5554265 234 Gene3D G3DSA:3.40.50.150 6 213 6.1E-16 T 11-10-2018 YH65_00195 0fc586c46ea88f740628023ad5554265 234 SUPERFAMILY SSF53335 8 218 1.11E-14 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YH65_00195 0fc586c46ea88f740628023ad5554265 234 Pfam PF08241 Methyltransferase domain 43 129 2.9E-5 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 YH65_07495 829c4edc8760cfb84f8d28e2eec669e8 117 SUPERFAMILY SSF52833 2 106 7.14E-27 T 11-10-2018 IPR036249 Thioredoxin-like superfamily YH65_07495 829c4edc8760cfb84f8d28e2eec669e8 117 Pfam PF00085 Thioredoxin 2 86 4.4E-19 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 YH65_07495 829c4edc8760cfb84f8d28e2eec669e8 117 ProSitePatterns PS00194 Thioredoxin family active site. 20 38 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 YH65_07495 829c4edc8760cfb84f8d28e2eec669e8 117 Gene3D G3DSA:3.40.30.10 1 108 7.9E-22 T 11-10-2018 YH65_09150 1baa56ca5e2e8c14d2f6f3ae64403a1c 252 Gene3D G3DSA:1.20.1300.10 2 252 5.2E-81 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 YH65_09150 1baa56ca5e2e8c14d2f6f3ae64403a1c 252 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 108 223 1.9E-16 T 11-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 YH65_09150 1baa56ca5e2e8c14d2f6f3ae64403a1c 252 SUPERFAMILY SSF81343 4 248 8.83E-73 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 YH65_09150 1baa56ca5e2e8c14d2f6f3ae64403a1c 252 PIRSF PIRSF000177 2 252 8.2E-93 T 11-10-2018 IPR004224 Fumarate reductase type B, transmembrane subunit GO:0006099 YH65_09875 b6006546ce71398cea2ecdedc9f668d0 113 SUPERFAMILY SSF52980 12 109 2.15E-23 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 YH65_09875 b6006546ce71398cea2ecdedc9f668d0 113 Gene3D G3DSA:3.40.1350.10 11 112 7.6E-22 T 11-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 YH65_09875 b6006546ce71398cea2ecdedc9f668d0 113 Pfam PF02021 Uncharacterised protein family UPF0102 13 91 7.8E-19 T 11-10-2018 IPR003509 Uncharacterised protein family UPF0102 YH65_09875 b6006546ce71398cea2ecdedc9f668d0 113 Hamap MF_00048 UPF0102 protein YraN [yraN]. 5 113 18.286 T 11-10-2018 IPR003509 Uncharacterised protein family UPF0102 YH65_00770 0ed117ca7311e06db89ee3072d05c0d2 275 Pfam PF12679 ABC-2 family transporter protein 7 274 1.3E-20 T 11-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 YH65_10095 72210e1135b7fbcafcdb1e42ab59b3f3 726 Gene3D G3DSA:3.10.105.10 405 646 1.2E-49 T 11-10-2018 YH65_10095 72210e1135b7fbcafcdb1e42ab59b3f3 726 SUPERFAMILY SSF53850 33 665 7.24E-90 T 11-10-2018 YH65_10095 72210e1135b7fbcafcdb1e42ab59b3f3 726 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 108 589 1.8E-51 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain YH65_09140 8cd299234c9bf4188e99a311ae099c6e 244 Gene3D G3DSA:3.10.20.30 6 111 8.6E-34 T 11-10-2018 IPR012675 Beta-grasp domain superfamily YH65_09140 8cd299234c9bf4188e99a311ae099c6e 244 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 62 70 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 YH65_09140 8cd299234c9bf4188e99a311ae099c6e 244 SUPERFAMILY SSF54292 9 111 3.01E-27 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 YH65_09140 8cd299234c9bf4188e99a311ae099c6e 244 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 14 235 1.4E-51 T 11-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 YH65_09140 8cd299234c9bf4188e99a311ae099c6e 244 Gene3D G3DSA:1.10.1060.10 112 244 5.9E-45 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 YH65_09140 8cd299234c9bf4188e99a311ae099c6e 244 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 12 116 1.7E-30 T 11-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 YH65_09140 8cd299234c9bf4188e99a311ae099c6e 244 Pfam PF13183 4Fe-4S dicluster domain 152 226 5.8E-10 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YH65_09140 8cd299234c9bf4188e99a311ae099c6e 244 SUPERFAMILY SSF46548 114 242 7.85E-26 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 YH65_01930 995b6df3b6fb586fcf9cdfdd169723a7 329 Pfam PF02504 Fatty acid synthesis protein 2 318 7.4E-111 T 11-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 YH65_01930 995b6df3b6fb586fcf9cdfdd169723a7 329 SUPERFAMILY SSF53659 1 326 5.35E-97 T 11-10-2018 YH65_01930 995b6df3b6fb586fcf9cdfdd169723a7 329 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 329 133.954 T 11-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 YH65_01930 995b6df3b6fb586fcf9cdfdd169723a7 329 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 2 328 1.8E-116 T 11-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 YH65_01930 995b6df3b6fb586fcf9cdfdd169723a7 329 Gene3D G3DSA:3.40.718.10 1 329 6.8E-125 T 11-10-2018 YH65_01930 995b6df3b6fb586fcf9cdfdd169723a7 329 PIRSF PIRSF002465 1 329 3.8E-120 T 11-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 YH65_01610 9b566f7ab4aab2b8ec7012aafb125de0 290 Pfam PF00795 Carbon-nitrogen hydrolase 3 267 8.6E-55 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 YH65_01610 9b566f7ab4aab2b8ec7012aafb125de0 290 Gene3D G3DSA:3.60.110.10 1 290 1.2E-87 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily YH65_01610 9b566f7ab4aab2b8ec7012aafb125de0 290 SUPERFAMILY SSF56317 1 287 2.09E-79 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily YH65_04470 2a30419abb9f194f66846a4d09d318fa 1091 Gene3D G3DSA:3.40.50.1380 954 1091 1.4E-32 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily YH65_04470 2a30419abb9f194f66846a4d09d318fa 1091 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 295 302 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 YH65_04470 2a30419abb9f194f66846a4d09d318fa 1091 SUPERFAMILY SSF48108 392 543 1.7E-38 T 11-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 YH65_04470 2a30419abb9f194f66846a4d09d318fa 1091 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1081 12.669 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 YH65_04470 2a30419abb9f194f66846a4d09d318fa 1091 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 418 541 6.4E-35 T 11-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 YH65_04470 2a30419abb9f194f66846a4d09d318fa 1091 SMART SM01096 415 542 3.2E-51 T 11-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 YH65_04470 2a30419abb9f194f66846a4d09d318fa 1091 Gene3D G3DSA:3.30.470.20 118 399 7.9E-119 T 11-10-2018 YH65_04470 2a30419abb9f194f66846a4d09d318fa 1091 SUPERFAMILY SSF52440 1 125 3.17E-43 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily YH65_04470 2a30419abb9f194f66846a4d09d318fa 1091 Gene3D G3DSA:3.30.470.20 670 953 9.4E-114 T 11-10-2018 YH65_04470 2a30419abb9f194f66846a4d09d318fa 1091 Gene3D G3DSA:3.40.50.20 557 666 1.8E-45 T 11-10-2018 YH65_04470 2a30419abb9f194f66846a4d09d318fa 1091 SUPERFAMILY SSF52440 561 679 3.31E-47 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily YH65_04470 2a30419abb9f194f66846a4d09d318fa 1091 Pfam PF02142 MGS-like domain 977 1059 8.0E-16 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain YH65_04470 2a30419abb9f194f66846a4d09d318fa 1091 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 126 332 1.5E-67 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 YH65_04470 2a30419abb9f194f66846a4d09d318fa 1091 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 677 878 2.3E-37 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 YH65_04470 2a30419abb9f194f66846a4d09d318fa 1091 SUPERFAMILY SSF52335 955 1089 1.31E-29 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily YH65_04470 2a30419abb9f194f66846a4d09d318fa 1091 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 842 849 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 YH65_04470 2a30419abb9f194f66846a4d09d318fa 1091 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1070 0.0 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 YH65_04470 2a30419abb9f194f66846a4d09d318fa 1091 Gene3D G3DSA:1.10.1030.10 401 545 4.9E-37 T 11-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 YH65_04470 2a30419abb9f194f66846a4d09d318fa 1091 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 713 727 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 YH65_04470 2a30419abb9f194f66846a4d09d318fa 1091 SMART SM00851 973 1059 1.3E-27 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain YH65_04470 2a30419abb9f194f66846a4d09d318fa 1091 SUPERFAMILY SSF56059 677 951 6.72E-99 T 11-10-2018 YH65_04470 2a30419abb9f194f66846a4d09d318fa 1091 Gene3D G3DSA:3.40.50.20 1 113 2.8E-44 T 11-10-2018 YH65_04470 2a30419abb9f194f66846a4d09d318fa 1091 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 166 178 4.3E-62 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 YH65_04470 2a30419abb9f194f66846a4d09d318fa 1091 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 4.3E-62 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 YH65_04470 2a30419abb9f194f66846a4d09d318fa 1091 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 4.3E-62 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 YH65_04470 2a30419abb9f194f66846a4d09d318fa 1091 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 202 221 4.3E-62 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 YH65_04470 2a30419abb9f194f66846a4d09d318fa 1091 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 237 254 4.3E-62 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 YH65_04470 2a30419abb9f194f66846a4d09d318fa 1091 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 295 324 4.3E-62 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 YH65_04470 2a30419abb9f194f66846a4d09d318fa 1091 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 376 394 4.3E-62 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 YH65_04470 2a30419abb9f194f66846a4d09d318fa 1091 SUPERFAMILY SSF56059 126 397 5.3E-103 T 11-10-2018 YH65_06150 784f92092bdcbb40c7fa4ebb5d927ade 560 SUPERFAMILY SSF81324 9 121 1.31E-12 T 11-10-2018 YH65_06150 784f92092bdcbb40c7fa4ebb5d927ade 560 Gene3D G3DSA:3.40.50.720 292 415 7.2E-24 T 11-10-2018 YH65_06150 784f92092bdcbb40c7fa4ebb5d927ade 560 Pfam PF02254 TrkA-N domain 128 246 2.9E-18 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 YH65_06150 784f92092bdcbb40c7fa4ebb5d927ade 560 Pfam PF02254 TrkA-N domain 291 400 6.8E-20 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 YH65_06150 784f92092bdcbb40c7fa4ebb5d927ade 560 SUPERFAMILY SSF51735 127 263 2.19E-20 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily YH65_06150 784f92092bdcbb40c7fa4ebb5d927ade 560 Gene3D G3DSA:3.40.50.720 120 264 6.0E-24 T 11-10-2018 YH65_06150 784f92092bdcbb40c7fa4ebb5d927ade 560 SUPERFAMILY SSF51735 288 427 9.57E-25 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily YH65_06150 784f92092bdcbb40c7fa4ebb5d927ade 560 Gene3D G3DSA:1.10.287.70 11 113 2.4E-5 T 11-10-2018 YH65_01790 6e56a750f00d1cc2e5591e4a15604c8c 214 SMART SM00421 152 209 9.9E-17 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YH65_01790 6e56a750f00d1cc2e5591e4a15604c8c 214 Gene3D G3DSA:3.40.50.12740 8 213 6.6E-50 T 11-10-2018 YH65_01790 6e56a750f00d1cc2e5591e4a15604c8c 214 SUPERFAMILY SSF46894 146 210 4.42E-17 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YH65_01790 6e56a750f00d1cc2e5591e4a15604c8c 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 185 2.4E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YH65_01790 6e56a750f00d1cc2e5591e4a15604c8c 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 169 2.4E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YH65_01790 6e56a750f00d1cc2e5591e4a15604c8c 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 185 197 2.4E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YH65_01790 6e56a750f00d1cc2e5591e4a15604c8c 214 SMART SM00448 7 120 8.7E-20 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YH65_01790 6e56a750f00d1cc2e5591e4a15604c8c 214 SUPERFAMILY SSF52172 7 136 3.56E-26 T 11-10-2018 IPR011006 CheY-like superfamily YH65_01790 6e56a750f00d1cc2e5591e4a15604c8c 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 154 209 9.6E-17 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YH65_01790 6e56a750f00d1cc2e5591e4a15604c8c 214 Pfam PF00072 Response regulator receiver domain 9 120 8.4E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YH65_09800 48903933158bc76763e95dbf12b58842 584 Gene3D G3DSA:1.10.760.10 11 102 5.8E-15 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_09800 48903933158bc76763e95dbf12b58842 584 SUPERFAMILY SSF46626 8 102 1.92E-14 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_09800 48903933158bc76763e95dbf12b58842 584 Gene3D G3DSA:2.140.10.20 124 484 3.1E-93 T 11-10-2018 IPR003143 Cytochrome cd1-nitrite reductase, C-terminal domain superfamily YH65_09800 48903933158bc76763e95dbf12b58842 584 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 30 98 1.6E-11 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YH65_09800 48903933158bc76763e95dbf12b58842 584 SUPERFAMILY SSF51004 147 578 3.14E-55 T 11-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily YH65_09800 48903933158bc76763e95dbf12b58842 584 Pfam PF02239 Cytochrome D1 heme domain 148 575 1.2E-55 T 11-10-2018 YH65_09975 4573b49916cfc456f0b266d53484a9f2 399 SUPERFAMILY SSF103473 16 394 1.96E-28 T 11-10-2018 IPR036259 MFS transporter superfamily YH65_09975 4573b49916cfc456f0b266d53484a9f2 399 Pfam PF07690 Major Facilitator Superfamily 232 392 4.0E-11 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YH65_09975 4573b49916cfc456f0b266d53484a9f2 399 Gene3D G3DSA:1.20.1250.20 11 395 2.7E-23 T 11-10-2018 YH65_00155 8343102309830e82599c9c3b99dc8d6f 678 Gene3D G3DSA:3.30.1370.120 25 178 5.2E-34 T 11-10-2018 IPR038591 NolW-like superfamily YH65_00155 8343102309830e82599c9c3b99dc8d6f 678 Pfam PF03958 Bacterial type II/III secretion system short domain 261 335 2.0E-11 T 11-10-2018 IPR005644 NolW-like YH65_00155 8343102309830e82599c9c3b99dc8d6f 678 Pfam PF03958 Bacterial type II/III secretion system short domain 185 251 2.2E-7 T 11-10-2018 IPR005644 NolW-like YH65_00155 8343102309830e82599c9c3b99dc8d6f 678 Pfam PF00263 Bacterial type II and III secretion system protein 433 599 2.7E-43 T 11-10-2018 IPR004846 Type II/III secretion system GO:0009306 YH65_00155 8343102309830e82599c9c3b99dc8d6f 678 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 28 607 5.3E-111 T 11-10-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 YH65_00155 8343102309830e82599c9c3b99dc8d6f 678 PRINTS PR00811 Bacterial general secretion pathway protein D signature 337 347 9.3E-10 T 11-10-2018 IPR001775 GspD/PilQ family YH65_00155 8343102309830e82599c9c3b99dc8d6f 678 PRINTS PR00811 Bacterial general secretion pathway protein D signature 429 453 9.3E-10 T 11-10-2018 IPR001775 GspD/PilQ family YH65_00155 8343102309830e82599c9c3b99dc8d6f 678 PRINTS PR00811 Bacterial general secretion pathway protein D signature 562 580 9.3E-10 T 11-10-2018 IPR001775 GspD/PilQ family YH65_00155 8343102309830e82599c9c3b99dc8d6f 678 Gene3D G3DSA:3.30.1370.120 184 253 2.0E-11 T 11-10-2018 IPR038591 NolW-like superfamily YH65_00155 8343102309830e82599c9c3b99dc8d6f 678 Gene3D G3DSA:3.30.1370.120 256 335 2.4E-11 T 11-10-2018 IPR038591 NolW-like superfamily YH65_00155 8343102309830e82599c9c3b99dc8d6f 678 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 543 577 - T 11-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 YH65_01565 4357bf079298086252d3bd928a4b685c 353 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 2 350 33.384 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 YH65_01565 4357bf079298086252d3bd928a4b685c 353 SUPERFAMILY SSF56014 259 351 8.5E-10 T 11-10-2018 YH65_01565 4357bf079298086252d3bd928a4b685c 353 Pfam PF04551 GcpE protein 7 347 1.1E-129 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 YH65_01565 4357bf079298086252d3bd928a4b685c 353 SUPERFAMILY SSF51717 32 215 1.1E-9 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 YH65_01565 4357bf079298086252d3bd928a4b685c 353 Gene3D G3DSA:3.30.413.10 255 353 2.1E-32 T 11-10-2018 YH65_01565 4357bf079298086252d3bd928a4b685c 353 PIRSF PIRSF004640 1 353 1.2E-141 T 11-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 YH65_01565 4357bf079298086252d3bd928a4b685c 353 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 4 345 2.6E-117 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 YH65_01565 4357bf079298086252d3bd928a4b685c 353 Gene3D G3DSA:3.20.20.20 1 253 6.2E-99 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 YH65_06435 c470bd39b6c4aaa6e8914b31fd4c46ac 336 Gene3D G3DSA:2.40.50.100 69 195 3.8E-24 T 11-10-2018 YH65_06435 c470bd39b6c4aaa6e8914b31fd4c46ac 336 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 71 195 1.3E-11 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YH65_06435 c470bd39b6c4aaa6e8914b31fd4c46ac 336 SUPERFAMILY SSF111369 81 193 3.01E-16 T 11-10-2018 YH65_06435 c470bd39b6c4aaa6e8914b31fd4c46ac 336 Gene3D G3DSA:2.40.420.20 242 334 5.4E-6 T 11-10-2018 YH65_06435 c470bd39b6c4aaa6e8914b31fd4c46ac 336 Gene3D G3DSA:1.10.287.470 102 165 3.8E-24 T 11-10-2018 YH65_01200 a942c35d6b3ebed2b1998a648e03583c 234 Pfam PF00687 Ribosomal protein L1p/L10e family 31 221 4.5E-55 T 11-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein YH65_01200 a942c35d6b3ebed2b1998a648e03583c 234 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 140 - T 11-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_01200 a942c35d6b3ebed2b1998a648e03583c 234 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 3 230 43.059 T 11-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 YH65_01200 a942c35d6b3ebed2b1998a648e03583c 234 SUPERFAMILY SSF56808 7 226 1.7E-82 T 11-10-2018 IPR023674 Ribosomal protein L1-like YH65_01200 a942c35d6b3ebed2b1998a648e03583c 234 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 4 229 7.8E-105 T 11-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 YH65_01200 a942c35d6b3ebed2b1998a648e03583c 234 Gene3D G3DSA:3.30.190.20 22 226 2.9E-83 T 11-10-2018 YH65_01200 a942c35d6b3ebed2b1998a648e03583c 234 Gene3D G3DSA:3.40.50.790 69 160 2.9E-83 T 11-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich YH65_01200 a942c35d6b3ebed2b1998a648e03583c 234 PIRSF PIRSF002155 2 228 9.0E-80 T 11-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_07905 7bdc0bbeccc2a8f4b4e1f69505c367e0 606 SUPERFAMILY SSF143968 320 454 9.55E-35 T 11-10-2018 YH65_07905 7bdc0bbeccc2a8f4b4e1f69505c367e0 606 TIGRFAM TIGR03701 mena_SCO4490: menaquinone biosynthesis decarboxylase, SCO4490 family 4 442 1.0E-186 T 11-10-2018 IPR022390 4-hydroxybenzoate decarboxylase subunit C GO:0016831 YH65_07905 7bdc0bbeccc2a8f4b4e1f69505c367e0 606 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 5 419 4.5E-121 T 11-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 YH65_07905 7bdc0bbeccc2a8f4b4e1f69505c367e0 606 SUPERFAMILY SSF50475 1 319 1.02E-99 T 11-10-2018 YH65_07905 7bdc0bbeccc2a8f4b4e1f69505c367e0 606 Gene3D G3DSA:3.40.1670.10 334 448 4.1E-22 T 11-10-2018 YH65_07905 7bdc0bbeccc2a8f4b4e1f69505c367e0 606 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 1 448 2.2E-129 T 11-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 YH65_07905 7bdc0bbeccc2a8f4b4e1f69505c367e0 606 SUPERFAMILY SSF143968 461 587 6.15E-9 T 11-10-2018 YH65_08985 4e00dc2cca8927d7d31402800ebfe53e 128 Gene3D G3DSA:3.30.420.140 2 128 3.3E-27 T 11-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 YH65_08985 4e00dc2cca8927d7d31402800ebfe53e 128 SUPERFAMILY SSF53098 4 127 4.1E-26 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily YH65_08985 4e00dc2cca8927d7d31402800ebfe53e 128 SMART SM00732 1 97 1.4E-22 T 11-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 YH65_08985 4e00dc2cca8927d7d31402800ebfe53e 128 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 5 126 5.9E-21 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 YH65_08985 4e00dc2cca8927d7d31402800ebfe53e 128 Pfam PF03652 Holliday junction resolvase 3 127 8.5E-29 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 YH65_08985 4e00dc2cca8927d7d31402800ebfe53e 128 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 1 128 16.49 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 YH65_08730 d5899a7181129dbdfd591bac3681f55e 182 SUPERFAMILY SSF46626 55 177 2.18E-14 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_08730 d5899a7181129dbdfd591bac3681f55e 182 Gene3D G3DSA:1.10.760.10 23 180 5.7E-17 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_08730 d5899a7181129dbdfd591bac3681f55e 182 TIGRFAM TIGR04485 thiosulf_SoxX: sulfur oxidation c-type cytochrome SoxX 98 177 7.0E-23 T 11-10-2018 IPR030999 Sulfur oxidation c-type cytochrome SoxX YH65_08730 d5899a7181129dbdfd591bac3681f55e 182 Pfam PF00034 Cytochrome c 99 178 6.5E-6 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YH65_00380 eabd56a38d37b7fdaece8ba0221e038d 296 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 230 246 - T 11-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 YH65_00380 eabd56a38d37b7fdaece8ba0221e038d 296 Gene3D G3DSA:3.20.20.150 1 295 2.4E-107 T 11-10-2018 YH65_00380 eabd56a38d37b7fdaece8ba0221e038d 296 SUPERFAMILY SSF51658 1 295 6.68E-97 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily YH65_00380 eabd56a38d37b7fdaece8ba0221e038d 296 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 190 197 - T 11-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 YH65_00380 eabd56a38d37b7fdaece8ba0221e038d 296 Pfam PF01261 Xylose isomerase-like TIM barrel 23 254 3.2E-39 T 11-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain YH65_00380 eabd56a38d37b7fdaece8ba0221e038d 296 Hamap MF_00152 Probable endonuclease 4 [nfo]. 2 294 41.774 T 11-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 YH65_00380 eabd56a38d37b7fdaece8ba0221e038d 296 SMART SM00518 3 294 4.7E-111 T 11-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 YH65_00380 eabd56a38d37b7fdaece8ba0221e038d 296 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 3 291 4.6E-100 T 11-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 YH65_00380 eabd56a38d37b7fdaece8ba0221e038d 296 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 69 77 - T 11-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 YH65_09725 069ff6ef767e6e8118c8b13aff335365 197 ProDom PD037531 MEMBRANE HYDROGENASE SUBUNIT COMPONENT HYDROGENASE-4 E OXIDOREDUCTASE PRECURSOR SIGNAL 1.-.-.- 54 185 8.0E-14 T 11-10-2018 YH65_09250 c77fa6e935c09c6b4351cd917e0c8178 300 Gene3D G3DSA:1.10.10.10 4 93 8.5E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YH65_09250 c77fa6e935c09c6b4351cd917e0c8178 300 SUPERFAMILY SSF53850 93 297 5.57E-21 T 11-10-2018 YH65_09250 c77fa6e935c09c6b4351cd917e0c8178 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 3.6E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YH65_09250 c77fa6e935c09c6b4351cd917e0c8178 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 3.6E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YH65_09250 c77fa6e935c09c6b4351cd917e0c8178 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 3.6E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YH65_09250 c77fa6e935c09c6b4351cd917e0c8178 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 3.5E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YH65_09250 c77fa6e935c09c6b4351cd917e0c8178 300 SUPERFAMILY SSF46785 4 108 4.65E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YH65_09250 c77fa6e935c09c6b4351cd917e0c8178 300 Gene3D G3DSA:3.40.190.290 94 298 2.4E-18 T 11-10-2018 YH65_09250 c77fa6e935c09c6b4351cd917e0c8178 300 Pfam PF03466 LysR substrate binding domain 92 297 5.8E-20 T 11-10-2018 IPR005119 LysR, substrate-binding YH65_02900 c193391099562de490ff266eab86d14b 430 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 4 424 1.4E-145 T 11-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 YH65_02900 c193391099562de490ff266eab86d14b 430 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 425 34.446 T 11-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 YH65_02900 c193391099562de490ff266eab86d14b 430 Gene3D G3DSA:2.160.10.10 241 413 2.3E-35 T 11-10-2018 YH65_02900 c193391099562de490ff266eab86d14b 430 SUPERFAMILY SSF51161 243 411 1.57E-31 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily YH65_02900 c193391099562de490ff266eab86d14b 430 Pfam PF12804 MobA-like NTP transferase domain 5 117 1.3E-15 T 11-10-2018 IPR025877 MobA-like NTP transferase YH65_02900 c193391099562de490ff266eab86d14b 430 SUPERFAMILY SSF53448 1 246 1.94E-55 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YH65_02900 c193391099562de490ff266eab86d14b 430 Gene3D G3DSA:3.90.550.10 2 240 1.1E-61 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YH65_02900 c193391099562de490ff266eab86d14b 430 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 376 404 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 YH65_02900 c193391099562de490ff266eab86d14b 430 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 328 356 0.0017 T 11-10-2018 IPR001451 Hexapeptide repeat YH65_02900 c193391099562de490ff266eab86d14b 430 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 368 402 7.3E-7 T 11-10-2018 IPR001451 Hexapeptide repeat YH65_07060 e31c39b65438c9b474835a0f5353dbbf 358 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 4 352 6.7E-94 T 11-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase YH65_07060 e31c39b65438c9b474835a0f5353dbbf 358 SUPERFAMILY SSF53383 2 354 1.88E-97 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase YH65_07060 e31c39b65438c9b474835a0f5353dbbf 358 PIRSF PIRSF000390 1 358 2.0E-95 T 11-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase YH65_07060 e31c39b65438c9b474835a0f5353dbbf 358 Gene3D G3DSA:3.40.640.10 1 235 1.3E-80 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 YH65_07060 e31c39b65438c9b474835a0f5353dbbf 358 Gene3D G3DSA:3.90.1150.10 237 358 9.3E-42 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 YH65_00270 a9fe068a934b1f96f81e0068fccc6b3a 103 Gene3D G3DSA:3.30.1310.10 3 101 2.1E-35 T 11-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily YH65_00270 a9fe068a934b1f96f81e0068fccc6b3a 103 PIRSF PIRSF004555 3 103 2.6E-28 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family YH65_00270 a9fe068a934b1f96f81e0068fccc6b3a 103 SUPERFAMILY SSF82607 12 99 2.62E-23 T 11-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily YH65_00270 a9fe068a934b1f96f81e0068fccc6b3a 103 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 5 97 1.1E-23 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family YH65_00270 a9fe068a934b1f96f81e0068fccc6b3a 103 Pfam PF02575 YbaB/EbfC DNA-binding family 12 99 3.0E-22 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family YH65_00270 a9fe068a934b1f96f81e0068fccc6b3a 103 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 97 20.155 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family YH65_08045 f0b051695e87aeadb0c93c07daa66c4e 301 SUPERFAMILY SSF53335 82 277 4.03E-27 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YH65_08045 f0b051695e87aeadb0c93c07daa66c4e 301 Pfam PF08003 Protein of unknown function (DUF1698) 3 298 1.1E-93 T 11-10-2018 IPR027555 tRNA (mo5U34)-methyltransferase-like YH65_08045 f0b051695e87aeadb0c93c07daa66c4e 301 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 9 297 1.5E-98 T 11-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 YH65_08045 f0b051695e87aeadb0c93c07daa66c4e 301 Hamap MF_01590 tRNA U34 carboxymethyltransferase [cmoB]. 1 299 49.175 T 11-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 YH65_08045 f0b051695e87aeadb0c93c07daa66c4e 301 Gene3D G3DSA:3.40.50.150 79 256 1.9E-20 T 11-10-2018 YH65_03605 78581708c89a1999f33818463f465e30 415 PRINTS PR00812 Bacterial general secretion pathway protein F signature 172 200 3.2E-7 T 11-10-2018 IPR003004 GspF/PilC family YH65_03605 78581708c89a1999f33818463f465e30 415 PRINTS PR00812 Bacterial general secretion pathway protein F signature 378 392 3.2E-7 T 11-10-2018 IPR003004 GspF/PilC family YH65_03605 78581708c89a1999f33818463f465e30 415 PRINTS PR00812 Bacterial general secretion pathway protein F signature 73 85 3.2E-7 T 11-10-2018 IPR003004 GspF/PilC family YH65_03605 78581708c89a1999f33818463f465e30 415 PRINTS PR00812 Bacterial general secretion pathway protein F signature 394 413 3.2E-7 T 11-10-2018 IPR003004 GspF/PilC family YH65_03605 78581708c89a1999f33818463f465e30 415 Gene3D G3DSA:1.20.81.30 270 374 1.7E-18 T 11-10-2018 YH65_03605 78581708c89a1999f33818463f465e30 415 Gene3D G3DSA:1.20.81.30 40 179 6.6E-22 T 11-10-2018 YH65_03605 78581708c89a1999f33818463f465e30 415 Pfam PF00482 Type II secretion system (T2SS), protein F 287 405 9.9E-22 T 11-10-2018 IPR018076 Type II secretion system F domain YH65_03605 78581708c89a1999f33818463f465e30 415 Pfam PF00482 Type II secretion system (T2SS), protein F 78 200 2.7E-24 T 11-10-2018 IPR018076 Type II secretion system F domain YH65_02770 47e508d049abe0893ec8ca32a0a30f21 132 SUPERFAMILY SSF54631 1 127 2.15E-25 T 11-10-2018 YH65_02770 47e508d049abe0893ec8ca32a0a30f21 132 Gene3D G3DSA:3.10.580.10 1 131 5.9E-26 T 11-10-2018 YH65_02770 47e508d049abe0893ec8ca32a0a30f21 132 SMART SM00116 12 61 0.0042 T 11-10-2018 IPR000644 CBS domain YH65_02770 47e508d049abe0893ec8ca32a0a30f21 132 SMART SM00116 79 126 1.6E-8 T 11-10-2018 IPR000644 CBS domain YH65_02770 47e508d049abe0893ec8ca32a0a30f21 132 Pfam PF00571 CBS domain 3 60 9.8E-7 T 11-10-2018 IPR000644 CBS domain YH65_02770 47e508d049abe0893ec8ca32a0a30f21 132 Pfam PF00571 CBS domain 72 126 2.1E-7 T 11-10-2018 IPR000644 CBS domain YH65_01405 651077bc090ddd0004d59de6d4bd0626 201 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 2 190 1.8E-44 T 11-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 YH65_01405 651077bc090ddd0004d59de6d4bd0626 201 Pfam PF01725 Ham1 family 3 189 1.0E-48 T 11-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 YH65_01405 651077bc090ddd0004d59de6d4bd0626 201 SUPERFAMILY SSF52972 1 194 1.65E-53 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like YH65_01405 651077bc090ddd0004d59de6d4bd0626 201 Hamap MF_01405 dITP/XTP pyrophosphatase. 1 197 42.812 T 11-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 YH65_01405 651077bc090ddd0004d59de6d4bd0626 201 Gene3D G3DSA:3.90.950.10 1 200 3.0E-59 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like YH65_03850 93bfed5afd4e4f45299eeb704c80e63c 261 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 9 215 1.6E-53 T 11-10-2018 IPR039447 Urease accessory protein UreH-like, transmembrane domain YH65_04705 4cf8b5bb6c0d3affe712544610c89131 154 Gene3D G3DSA:3.40.630.30 4 135 2.2E-29 T 11-10-2018 YH65_04705 4cf8b5bb6c0d3affe712544610c89131 154 SUPERFAMILY SSF55729 2 128 1.83E-20 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase YH65_04705 4cf8b5bb6c0d3affe712544610c89131 154 Pfam PF00583 Acetyltransferase (GNAT) family 38 118 4.9E-13 T 11-10-2018 IPR000182 GNAT domain YH65_02940 75c2c9588a87f74a4bcccc034c1c24e3 305 Gene3D G3DSA:3.30.420.40 3 124 8.8E-25 T 11-10-2018 YH65_02940 75c2c9588a87f74a4bcccc034c1c24e3 305 Gene3D G3DSA:3.30.420.150 130 305 1.2E-37 T 11-10-2018 YH65_02940 75c2c9588a87f74a4bcccc034c1c24e3 305 Pfam PF02541 Ppx/GppA phosphatase family 31 303 3.6E-45 T 11-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 YH65_02940 75c2c9588a87f74a4bcccc034c1c24e3 305 SUPERFAMILY SSF53067 8 124 6.78E-23 T 11-10-2018 YH65_02940 75c2c9588a87f74a4bcccc034c1c24e3 305 SUPERFAMILY SSF53067 132 303 4.0E-30 T 11-10-2018 YH65_08255 a4fb54e849eab2b4b1dc5075584e50e6 110 Gene3D G3DSA:3.30.70.20 46 104 5.4E-6 T 11-10-2018 YH65_08255 a4fb54e849eab2b4b1dc5075584e50e6 110 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 56 67 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YH65_08255 a4fb54e849eab2b4b1dc5075584e50e6 110 SUPERFAMILY SSF54862 10 89 3.12E-18 T 11-10-2018 YH65_08255 a4fb54e849eab2b4b1dc5075584e50e6 110 Pfam PF13187 4Fe-4S dicluster domain 18 70 7.5E-9 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YH65_08255 a4fb54e849eab2b4b1dc5075584e50e6 110 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 19 30 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YH65_08255 a4fb54e849eab2b4b1dc5075584e50e6 110 Gene3D G3DSA:3.30.70.20 2 45 3.2E-6 T 11-10-2018 YH65_00150 5deda3185373094c7287bb9c270f7f17 280 Gene3D G3DSA:2.30.42.10 181 280 2.4E-21 T 11-10-2018 YH65_00150 5deda3185373094c7287bb9c270f7f17 280 SUPERFAMILY SSF50156 183 278 6.7E-17 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 YH65_00150 5deda3185373094c7287bb9c270f7f17 280 SMART SM00228 197 270 1.4E-8 T 11-10-2018 IPR001478 PDZ domain GO:0005515 YH65_00150 5deda3185373094c7287bb9c270f7f17 280 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 201 267 7.8E-7 T 11-10-2018 IPR001478 PDZ domain GO:0005515 YH65_05720 3e027b6bdef3d8bf28f7f0d2d64049ca 362 Gene3D G3DSA:3.20.20.120 115 352 6.8E-106 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily YH65_05720 3e027b6bdef3d8bf28f7f0d2d64049ca 362 Gene3D G3DSA:3.30.390.10 7 114 6.8E-106 T 11-10-2018 IPR029017 Enolase-like, N-terminal YH65_05720 3e027b6bdef3d8bf28f7f0d2d64049ca 362 SUPERFAMILY SSF54826 2 124 6.27E-29 T 11-10-2018 YH65_05720 3e027b6bdef3d8bf28f7f0d2d64049ca 362 SMART SM00922 140 238 1.3E-22 T 11-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal YH65_05720 3e027b6bdef3d8bf28f7f0d2d64049ca 362 SUPERFAMILY SSF51604 116 353 1.07E-61 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily YH65_05720 3e027b6bdef3d8bf28f7f0d2d64049ca 362 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 13 123 5.1E-14 T 11-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain YH65_05720 3e027b6bdef3d8bf28f7f0d2d64049ca 362 Pfam PF13378 Enolase C-terminal domain-like 147 353 9.5E-44 T 11-10-2018 IPR029065 Enolase C-terminal domain-like YH65_07475 4913d7d3b7faa457c11f669c0fc30690 479 Pfam PF13581 Histidine kinase-like ATPase domain 32 125 2.2E-6 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YH65_07475 4913d7d3b7faa457c11f669c0fc30690 479 Gene3D G3DSA:3.40.630.30 151 284 3.4E-7 T 11-10-2018 YH65_07475 4913d7d3b7faa457c11f669c0fc30690 479 SUPERFAMILY SSF55729 155 290 1.28E-10 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase YH65_10325 d80c0ab02bc61d09e6307c98acaac035 89 SUPERFAMILY SSF117991 6 89 3.92E-22 T 11-10-2018 IPR027471 YbeD-like domain superfamily YH65_10325 d80c0ab02bc61d09e6307c98acaac035 89 Gene3D G3DSA:3.30.70.260 17 89 6.7E-11 T 11-10-2018 YH65_10325 d80c0ab02bc61d09e6307c98acaac035 89 Pfam PF04359 Protein of unknown function (DUF493) 11 88 4.8E-17 T 11-10-2018 IPR007454 Uncharacterised protein family UPF0250 YH65_10325 d80c0ab02bc61d09e6307c98acaac035 89 ProDom PD061650 JHP0447 HP0495 CJ0253 13 83 2.0E-11 T 11-10-2018 YH65_00330 9d744e9d92900e049898c4cd27e84724 347 SUPERFAMILY SSF48452 73 165 3.4E-14 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YH65_10335 40f96eb9454e52a19c2a7b3786fd7de0 316 PIRSF PIRSF031900 46 315 3.9E-27 T 11-10-2018 IPR014567 Uncharacterised conserved protein UCP031900 YH65_10335 40f96eb9454e52a19c2a7b3786fd7de0 316 Pfam PF13449 Esterase-like activity of phytase 52 299 9.7E-39 T 11-10-2018 IPR027372 Phytase-like domain YH65_09480 515e890dbe94dbece7466da3a51ad739 344 Pfam PF00318 Ribosomal protein S2 7 222 4.9E-94 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YH65_09480 515e890dbe94dbece7466da3a51ad739 344 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 1 224 3.0E-105 T 11-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_09480 515e890dbe94dbece7466da3a51ad739 344 Gene3D G3DSA:1.10.287.610 95 150 4.6E-88 T 11-10-2018 YH65_09480 515e890dbe94dbece7466da3a51ad739 344 PRINTS PR00395 Ribosomal protein S2 signature 156 173 1.4E-34 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YH65_09480 515e890dbe94dbece7466da3a51ad739 344 PRINTS PR00395 Ribosomal protein S2 signature 35 44 1.4E-34 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YH65_09480 515e890dbe94dbece7466da3a51ad739 344 PRINTS PR00395 Ribosomal protein S2 signature 85 102 1.4E-34 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YH65_09480 515e890dbe94dbece7466da3a51ad739 344 PRINTS PR00395 Ribosomal protein S2 signature 4 22 1.4E-34 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YH65_09480 515e890dbe94dbece7466da3a51ad739 344 PRINTS PR00395 Ribosomal protein S2 signature 173 184 1.4E-34 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YH65_09480 515e890dbe94dbece7466da3a51ad739 344 PRINTS PR00395 Ribosomal protein S2 signature 194 208 1.4E-34 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YH65_09480 515e890dbe94dbece7466da3a51ad739 344 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 1 223 39.201 T 11-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_09480 515e890dbe94dbece7466da3a51ad739 344 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 4 15 - T 11-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 YH65_09480 515e890dbe94dbece7466da3a51ad739 344 Gene3D G3DSA:3.40.50.10490 8 213 4.6E-88 T 11-10-2018 YH65_09480 515e890dbe94dbece7466da3a51ad739 344 SUPERFAMILY SSF52313 4 228 3.4E-92 T 11-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily YH65_09480 515e890dbe94dbece7466da3a51ad739 344 Gene3D G3DSA:1.10.150.20 273 324 4.5E-7 T 11-10-2018 YH65_00305 ca613f997307691abfcecc34878e6014 188 Hamap MF_00052_B Ribonuclease HII [rnhB]. 7 180 31.129 T 11-10-2018 IPR022898 Ribonuclease HII GO:0004523 YH65_00305 ca613f997307691abfcecc34878e6014 188 Pfam PF01351 Ribonuclease HII 9 178 1.0E-29 T 11-10-2018 IPR024567 Ribonuclease HII/HIII domain YH65_00305 ca613f997307691abfcecc34878e6014 188 Gene3D G3DSA:3.30.420.10 1 185 4.9E-63 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 YH65_00305 ca613f997307691abfcecc34878e6014 188 SUPERFAMILY SSF53098 4 178 1.43E-53 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily YH65_06120 3f9e7a48b69ca960f638caa422dca74a 59 Pfam PF11127 Protein of unknown function (DUF2892) 11 54 3.6E-8 T 11-10-2018 IPR021309 Protein of unknown function DUF2892 YH65_02150 8ddc4897042e91d2da08cb2e4fee5e09 142 Gene3D G3DSA:3.30.300.70 1 75 3.7E-17 T 11-10-2018 IPR035956 RimP, N-terminal domain superfamily YH65_02150 8ddc4897042e91d2da08cb2e4fee5e09 142 Pfam PF17384 RimP C-terminal SH3 domain 81 124 1.7E-8 T 11-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal YH65_02150 8ddc4897042e91d2da08cb2e4fee5e09 142 Pfam PF02576 RimP N-terminal domain 7 78 2.9E-20 T 11-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal YH65_02150 8ddc4897042e91d2da08cb2e4fee5e09 142 SUPERFAMILY SSF74942 79 141 1.83E-6 T 11-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily YH65_02150 8ddc4897042e91d2da08cb2e4fee5e09 142 SUPERFAMILY SSF75420 3 78 1.14E-18 T 11-10-2018 IPR035956 RimP, N-terminal domain superfamily YH65_02150 8ddc4897042e91d2da08cb2e4fee5e09 142 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 1 142 19.141 T 11-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 YH65_00685 29724e4b9d718b35c8aa02747e54d748 221 Gene3D G3DSA:1.10.10.10 131 221 1.2E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YH65_00685 29724e4b9d718b35c8aa02747e54d748 221 SUPERFAMILY SSF52172 9 173 1.57E-33 T 11-10-2018 IPR011006 CheY-like superfamily YH65_00685 29724e4b9d718b35c8aa02747e54d748 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 218 3.9E-13 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YH65_00685 29724e4b9d718b35c8aa02747e54d748 221 SMART SM00448 7 118 3.8E-31 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YH65_00685 29724e4b9d718b35c8aa02747e54d748 221 SMART SM00862 149 219 2.9E-13 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YH65_00685 29724e4b9d718b35c8aa02747e54d748 221 Pfam PF00072 Response regulator receiver domain 9 118 8.0E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YH65_00685 29724e4b9d718b35c8aa02747e54d748 221 Gene3D G3DSA:3.40.50.2300 1 130 2.5E-32 T 11-10-2018 YH65_08280 ca647f7d87ea24760354613e35c54aa0 283 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 11 282 3.1E-96 T 11-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 YH65_08280 ca647f7d87ea24760354613e35c54aa0 283 Pfam PF05681 Fumarate hydratase (Fumerase) 11 281 6.2E-104 T 11-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 YH65_04740 4ba2e2e049d1cda34d8ae370dd9e9f04 277 Gene3D G3DSA:3.30.420.10 115 262 1.2E-20 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 YH65_04740 4ba2e2e049d1cda34d8ae370dd9e9f04 277 Pfam PF13683 Integrase core domain 202 267 1.0E-27 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 YH65_04740 4ba2e2e049d1cda34d8ae370dd9e9f04 277 SUPERFAMILY SSF53098 116 268 2.91E-39 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily YH65_04740 4ba2e2e049d1cda34d8ae370dd9e9f04 277 Pfam PF13276 HTH-like domain 45 102 6.3E-9 T 11-10-2018 IPR025948 HTH-like domain YH65_01645 4ba2e2e049d1cda34d8ae370dd9e9f04 277 Gene3D G3DSA:3.30.420.10 115 262 1.2E-20 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 YH65_01645 4ba2e2e049d1cda34d8ae370dd9e9f04 277 Pfam PF13683 Integrase core domain 202 267 1.0E-27 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 YH65_01645 4ba2e2e049d1cda34d8ae370dd9e9f04 277 SUPERFAMILY SSF53098 116 268 2.91E-39 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily YH65_01645 4ba2e2e049d1cda34d8ae370dd9e9f04 277 Pfam PF13276 HTH-like domain 45 102 6.3E-9 T 11-10-2018 IPR025948 HTH-like domain YH65_01245 d0f21400a403bf6afee0b5102929e051 80 Gene3D G3DSA:1.10.260.40 1 76 1.6E-8 T 11-10-2018 YH65_02915 160662ebec04143e8b84a52d239596af 142 Gene3D G3DSA:3.40.50.720 5 142 6.7E-42 T 11-10-2018 YH65_02915 160662ebec04143e8b84a52d239596af 142 Pfam PF13380 CoA binding domain 23 138 1.5E-39 T 11-10-2018 IPR003781 CoA-binding GO:0048037 YH65_02915 160662ebec04143e8b84a52d239596af 142 SUPERFAMILY SSF51735 10 140 9.7E-40 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily YH65_02915 160662ebec04143e8b84a52d239596af 142 SMART SM00881 18 112 9.0E-21 T 11-10-2018 IPR003781 CoA-binding GO:0048037 YH65_08590 11498e486530d87a6dd3bff7d00d23f7 383 Gene3D G3DSA:3.30.70.20 4 66 2.6E-5 T 11-10-2018 YH65_08590 11498e486530d87a6dd3bff7d00d23f7 383 SUPERFAMILY SSF54862 19 65 6.9E-6 T 11-10-2018 YH65_08590 11498e486530d87a6dd3bff7d00d23f7 383 Gene3D G3DSA:3.30.70.20 263 336 6.7E-11 T 11-10-2018 YH65_08590 11498e486530d87a6dd3bff7d00d23f7 383 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 300 311 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YH65_08590 11498e486530d87a6dd3bff7d00d23f7 383 SUPERFAMILY SSF54862 251 363 6.85E-14 T 11-10-2018 YH65_08590 11498e486530d87a6dd3bff7d00d23f7 383 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 269 280 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YH65_08590 11498e486530d87a6dd3bff7d00d23f7 383 Pfam PF00037 4Fe-4S binding domain 265 284 3.0E-5 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YH65_02990 0a3fe6597f3a8eb5e1d4dcad45608aeb 407 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 15 396 4.3E-162 T 11-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 YH65_02990 0a3fe6597f3a8eb5e1d4dcad45608aeb 407 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 88 102 - T 11-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 YH65_02990 0a3fe6597f3a8eb5e1d4dcad45608aeb 407 PIRSF PIRSF001413 3 403 2.5E-164 T 11-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 YH65_02990 0a3fe6597f3a8eb5e1d4dcad45608aeb 407 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 10 398 48.971 T 11-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 YH65_02990 0a3fe6597f3a8eb5e1d4dcad45608aeb 407 Gene3D G3DSA:3.40.50.1100 18 213 3.6E-164 T 11-10-2018 YH65_02990 0a3fe6597f3a8eb5e1d4dcad45608aeb 407 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 61 385 6.6E-40 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme YH65_02990 0a3fe6597f3a8eb5e1d4dcad45608aeb 407 SUPERFAMILY SSF53686 11 396 1.14E-132 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme YH65_02990 0a3fe6597f3a8eb5e1d4dcad45608aeb 407 Gene3D G3DSA:3.40.50.1100 62 391 3.6E-164 T 11-10-2018 YH65_07225 e3895982345c6e7201eb89c0ea4d7846 595 Gene3D G3DSA:3.10.20.310 192 266 9.9E-10 T 11-10-2018 YH65_07225 e3895982345c6e7201eb89c0ea4d7846 595 Pfam PF01103 Surface antigen 294 595 1.3E-34 T 11-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 YH65_07225 e3895982345c6e7201eb89c0ea4d7846 595 Gene3D G3DSA:2.40.160.50 270 594 2.2E-54 T 11-10-2018 YH65_07225 e3895982345c6e7201eb89c0ea4d7846 595 Gene3D G3DSA:3.10.20.310 116 191 7.4E-6 T 11-10-2018 YH65_05625 04ed3a40720f819d31340d9c7eb603c1 301 Pfam PF11563 Protoglobin 4 154 1.6E-27 T 11-10-2018 YH65_05625 04ed3a40720f819d31340d9c7eb603c1 301 Pfam PF06146 Phosphate-starvation-inducible E 220 287 1.6E-8 T 11-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like YH65_05625 04ed3a40720f819d31340d9c7eb603c1 301 Gene3D G3DSA:1.10.490.10 2 161 3.8E-39 T 11-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 YH65_05625 04ed3a40720f819d31340d9c7eb603c1 301 SUPERFAMILY SSF46458 3 147 2.22E-37 T 11-10-2018 IPR009050 Globin-like superfamily YH65_00285 d40494410c06011e1d840690dc396c9d 383 Pfam PF16930 Putative porin 66 230 1.8E-6 T 11-10-2018 IPR032638 Putative bacterial porin YH65_00285 d40494410c06011e1d840690dc396c9d 383 Pfam PF16930 Putative porin 283 355 2.1E-10 T 11-10-2018 IPR032638 Putative bacterial porin YH65_05650 40e06883aa8d2ec80b6e5d72aba1a37b 527 Gene3D G3DSA:3.30.750.24 417 511 3.6E-30 T 11-10-2018 IPR036513 STAS domain superfamily YH65_05650 40e06883aa8d2ec80b6e5d72aba1a37b 527 Pfam PF00916 Sulfate permease family 13 388 3.4E-52 T 11-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 YH65_05650 40e06883aa8d2ec80b6e5d72aba1a37b 527 Pfam PF01740 STAS domain 431 523 1.4E-11 T 11-10-2018 IPR002645 STAS domain YH65_05650 40e06883aa8d2ec80b6e5d72aba1a37b 527 SUPERFAMILY SSF52091 425 510 3.34E-14 T 11-10-2018 IPR036513 STAS domain superfamily YH65_03140 8e16eb98286a0e24eff2c6a9818b23c9 231 Pfam PF00899 ThiF family 15 169 2.0E-40 T 11-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 YH65_03140 8e16eb98286a0e24eff2c6a9818b23c9 231 Gene3D G3DSA:3.40.50.720 10 220 3.6E-49 T 11-10-2018 YH65_03140 8e16eb98286a0e24eff2c6a9818b23c9 231 SUPERFAMILY SSF69572 9 217 8.76E-55 T 11-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 YH65_06860 43e4ee872b9dfbbd95aaacd9a9a72f12 78 Pfam PF12787 EcsC protein family 3 60 1.8E-12 T 11-10-2018 IPR024787 EcsC protein YH65_08560 e7ac1b374519c6edc80e49b297ae76cd 163 Pfam PF04608 Phosphatidylglycerophosphatase A 6 154 6.5E-38 T 11-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 YH65_08560 e7ac1b374519c6edc80e49b297ae76cd 163 PIRSF PIRSF006162 1 162 5.3E-42 T 11-10-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 YH65_08560 e7ac1b374519c6edc80e49b297ae76cd 163 SUPERFAMILY SSF101307 5 155 2.35E-28 T 11-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 YH65_08815 396867bf8afb31d0a1103fb17ab9d8f2 339 Gene3D G3DSA:1.10.530.10 79 325 3.5E-99 T 11-10-2018 YH65_08815 396867bf8afb31d0a1103fb17ab9d8f2 339 SUPERFAMILY SSF53955 10 329 3.94E-78 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily YH65_08815 396867bf8afb31d0a1103fb17ab9d8f2 339 Pfam PF13406 Transglycosylase SLT domain 27 324 1.0E-86 T 11-10-2018 IPR031304 Transglycosylase SLT domain 2 YH65_08815 396867bf8afb31d0a1103fb17ab9d8f2 339 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 31 326 4.7E-91 T 11-10-2018 IPR011757 Lytic transglycosylase MltB YH65_08815 396867bf8afb31d0a1103fb17ab9d8f2 339 Gene3D G3DSA:1.10.8.350 29 205 3.5E-99 T 11-10-2018 YH65_02105 b4ea96553b87d54d0d0636ca72ce2364 272 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 102 270 4.0E-62 T 11-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 YH65_02105 b4ea96553b87d54d0d0636ca72ce2364 272 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 15 100 2.1E-17 T 11-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 YH65_02105 b4ea96553b87d54d0d0636ca72ce2364 272 Gene3D G3DSA:3.90.1170.20 10 267 9.5E-92 T 11-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 YH65_02105 b4ea96553b87d54d0d0636ca72ce2364 272 Gene3D G3DSA:3.20.20.70 116 261 9.5E-92 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YH65_02105 b4ea96553b87d54d0d0636ca72ce2364 272 PIRSF PIRSF006250 1 272 3.6E-80 T 11-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 YH65_02105 b4ea96553b87d54d0d0636ca72ce2364 272 SUPERFAMILY SSF54675 3 100 2.0E-18 T 11-10-2018 YH65_02105 b4ea96553b87d54d0d0636ca72ce2364 272 SUPERFAMILY SSF51690 102 271 7.85E-57 T 11-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 YH65_02105 b4ea96553b87d54d0d0636ca72ce2364 272 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 7 271 3.9E-85 T 11-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 YH65_03455 44e7d4d33303df7d5b71956b610e9e26 682 SUPERFAMILY SSF109604 401 532 2.54E-5 T 11-10-2018 YH65_03455 44e7d4d33303df7d5b71956b610e9e26 682 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 2 680 22.665 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YH65_03455 44e7d4d33303df7d5b71956b610e9e26 682 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 6 19 1.1E-29 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YH65_03455 44e7d4d33303df7d5b71956b610e9e26 682 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 399 418 1.1E-29 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YH65_03455 44e7d4d33303df7d5b71956b610e9e26 682 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 242 257 1.1E-29 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YH65_03455 44e7d4d33303df7d5b71956b610e9e26 682 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 48 60 1.1E-29 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YH65_03455 44e7d4d33303df7d5b71956b610e9e26 682 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 313 329 1.1E-29 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YH65_03455 44e7d4d33303df7d5b71956b610e9e26 682 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 5 548 4.5E-182 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YH65_03455 44e7d4d33303df7d5b71956b610e9e26 682 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 2 680 2.6E-210 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YH65_03250 405d522112335f95a8aa9126b86b68bf 272 Pfam PF01875 Memo-like protein 8 264 9.0E-55 T 11-10-2018 IPR002737 MEMO1 family Reactome: R-HSA-6785631 YH65_03250 405d522112335f95a8aa9126b86b68bf 272 Gene3D G3DSA:3.40.830.10 4 268 1.8E-63 T 11-10-2018 YH65_03250 405d522112335f95a8aa9126b86b68bf 272 TIGRFAM TIGR04336 AmmeMemoSam_B: AmmeMemoRadiSam system protein B 6 266 2.9E-74 T 11-10-2018 YH65_03250 405d522112335f95a8aa9126b86b68bf 272 Hamap MF_00055 MEMO1 family protein . 4 267 45.963 T 11-10-2018 IPR002737 MEMO1 family Reactome: R-HSA-6785631 YH65_10580 a95558b054ab0aaefa919a7e43fe2e2d 92 Gene3D G3DSA:3.30.860.10 1 91 1.2E-37 T 11-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_10580 a95558b054ab0aaefa919a7e43fe2e2d 92 Pfam PF00203 Ribosomal protein S19 3 83 4.8E-34 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_10580 a95558b054ab0aaefa919a7e43fe2e2d 92 PIRSF PIRSF002144 1 91 7.2E-31 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_10580 a95558b054ab0aaefa919a7e43fe2e2d 92 SUPERFAMILY SSF54570 3 84 1.83E-34 T 11-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_10580 a95558b054ab0aaefa919a7e43fe2e2d 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 2.7E-21 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_10580 a95558b054ab0aaefa919a7e43fe2e2d 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 2.7E-21 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_10580 a95558b054ab0aaefa919a7e43fe2e2d 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 2.7E-21 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_10580 a95558b054ab0aaefa919a7e43fe2e2d 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 89 3.8E-44 T 11-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 YH65_10580 a95558b054ab0aaefa919a7e43fe2e2d 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 24.192 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_10580 a95558b054ab0aaefa919a7e43fe2e2d 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 11-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_04925 3d71b55343886f9a939cd674a17d26e0 308 SUPERFAMILY SSF52283 2 121 1.28E-19 T 11-10-2018 YH65_04925 3d71b55343886f9a939cd674a17d26e0 308 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 106 268 2.6E-35 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 YH65_04925 3d71b55343886f9a939cd674a17d26e0 308 Gene3D G3DSA:3.40.50.720 5 292 2.0E-71 T 11-10-2018 YH65_04925 3d71b55343886f9a939cd674a17d26e0 308 Gene3D G3DSA:3.40.50.720 97 268 2.0E-71 T 11-10-2018 YH65_04925 3d71b55343886f9a939cd674a17d26e0 308 SUPERFAMILY SSF51735 99 269 3.06E-37 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily YH65_04925 3d71b55343886f9a939cd674a17d26e0 308 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 8 299 1.3E-22 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 YH65_06585 80a631f2d856c988009c2cdd9b60350e 944 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 8 921 0.0 T 11-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 YH65_06585 80a631f2d856c988009c2cdd9b60350e 944 Gene3D G3DSA:3.40.50.300 612 935 3.3E-133 T 11-10-2018 YH65_06585 80a631f2d856c988009c2cdd9b60350e 944 ProSitePatterns PS00211 ABC transporters family signature. 826 840 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YH65_06585 80a631f2d856c988009c2cdd9b60350e 944 Gene3D G3DSA:1.10.8.280 295 399 2.0E-221 T 11-10-2018 YH65_06585 80a631f2d856c988009c2cdd9b60350e 944 SUPERFAMILY SSF52540 11 569 4.84E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_06585 80a631f2d856c988009c2cdd9b60350e 944 Gene3D G3DSA:3.40.50.300 10 594 2.0E-221 T 11-10-2018 YH65_06585 80a631f2d856c988009c2cdd9b60350e 944 Pfam PF00005 ABC transporter 620 856 7.1E-7 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YH65_06585 80a631f2d856c988009c2cdd9b60350e 944 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YH65_06585 80a631f2d856c988009c2cdd9b60350e 944 Gene3D G3DSA:3.30.190.20 134 243 2.0E-221 T 11-10-2018 YH65_06585 80a631f2d856c988009c2cdd9b60350e 944 Gene3D G3DSA:1.20.1580.10 688 826 3.3E-133 T 11-10-2018 YH65_06585 80a631f2d856c988009c2cdd9b60350e 944 SUPERFAMILY SSF52540 616 905 1.66E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_06585 80a631f2d856c988009c2cdd9b60350e 944 Gene3D G3DSA:1.20.1580.10 94 492 2.0E-221 T 11-10-2018 YH65_01485 d413df335d33f677a0f96d53b755d7c4 287 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 4 282 1.1E-95 T 11-10-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 YH65_01485 d413df335d33f677a0f96d53b755d7c4 287 Gene3D G3DSA:3.40.50.720 4 270 3.5E-107 T 11-10-2018 YH65_01485 d413df335d33f677a0f96d53b755d7c4 287 Gene3D G3DSA:3.90.25.10 160 276 3.5E-107 T 11-10-2018 YH65_01485 d413df335d33f677a0f96d53b755d7c4 287 SUPERFAMILY SSF51735 1 283 1.53E-97 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily YH65_01485 d413df335d33f677a0f96d53b755d7c4 287 Pfam PF04321 RmlD substrate binding domain 3 282 5.3E-103 T 11-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 YH65_10115 b0406162259fc78c0161231bc26c6ead 129 Gene3D G3DSA:3.30.230.10 1 129 1.3E-45 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YH65_10115 b0406162259fc78c0161231bc26c6ead 129 Pfam PF00380 Ribosomal protein S9/S16 8 129 1.1E-41 T 11-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 YH65_10115 b0406162259fc78c0161231bc26c6ead 129 SUPERFAMILY SSF54211 4 129 2.2E-41 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold YH65_10115 b0406162259fc78c0161231bc26c6ead 129 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 129 28.198 T 11-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid YH65_10115 b0406162259fc78c0161231bc26c6ead 129 ProSitePatterns PS00360 Ribosomal protein S9 signature. 68 86 - T 11-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 YH65_02525 9943edc986002a0a78802689b4dbcd59 222 SUPERFAMILY SSF54523 6 93 3.92E-13 T 11-10-2018 YH65_02525 9943edc986002a0a78802689b4dbcd59 222 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 25 2.8E-5 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site YH65_02525 9943edc986002a0a78802689b4dbcd59 222 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 26 6.6E-5 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site YH65_02525 9943edc986002a0a78802689b4dbcd59 222 Gene3D G3DSA:3.30.700.10 6 146 2.0E-9 T 11-10-2018 YH65_02235 bd28d4b7be3ea2ac0e6c546441c9c3a3 297 SUPERFAMILY SSF69593 94 276 3.66E-6 T 11-10-2018 YH65_02235 bd28d4b7be3ea2ac0e6c546441c9c3a3 297 PIRSF PIRSF026649 1 295 4.8E-62 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 YH65_02235 bd28d4b7be3ea2ac0e6c546441c9c3a3 297 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 12 289 1.2E-61 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 YH65_00615 30438e7b8e6394cb7bf120372cf02501 431 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 143 163 - T 11-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 YH65_00615 30438e7b8e6394cb7bf120372cf02501 431 Pfam PF00919 Uncharacterized protein family UPF0004 3 101 5.3E-27 T 11-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 YH65_00615 30438e7b8e6394cb7bf120372cf02501 431 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 2 431 62.485 T 11-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 YH65_00615 30438e7b8e6394cb7bf120372cf02501 431 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 3 431 4.6E-163 T 11-10-2018 YH65_00615 30438e7b8e6394cb7bf120372cf02501 431 SUPERFAMILY SSF102114 123 364 8.76E-54 T 11-10-2018 YH65_00615 30438e7b8e6394cb7bf120372cf02501 431 Pfam PF04055 Radical SAM superfamily 143 317 2.1E-25 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 YH65_00615 30438e7b8e6394cb7bf120372cf02501 431 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 3 428 4.1E-141 T 11-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 YH65_00615 30438e7b8e6394cb7bf120372cf02501 431 Gene3D G3DSA:3.80.30.20 138 373 4.9E-81 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe YH65_00615 30438e7b8e6394cb7bf120372cf02501 431 Gene3D G3DSA:3.40.50.12160 2 133 1.1E-31 T 11-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily YH65_00615 30438e7b8e6394cb7bf120372cf02501 431 SMART SM00729 139 360 3.4E-54 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 YH65_00615 30438e7b8e6394cb7bf120372cf02501 431 Pfam PF01938 TRAM domain 372 431 1.3E-10 T 11-10-2018 IPR002792 TRAM domain YH65_08180 b664cf219034366c223564bfc24f64d8 662 Pfam PF09972 Predicted membrane protein (DUF2207) 27 596 5.5E-59 T 11-10-2018 IPR018702 Protein of unknown function DUF2207, membrane YH65_01920 e9bb03c6c3861bf29a076c6140f74346 124 Pfam PF02620 Uncharacterized ACR, COG1399 38 110 3.4E-5 T 11-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD YH65_03465 97eae3a316d40fee33e69b6a626b4c86 251 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 20 89 7.4E-14 T 11-10-2018 IPR007471 N-end aminoacyl transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 YH65_03465 97eae3a316d40fee33e69b6a626b4c86 251 SUPERFAMILY SSF55729 82 233 3.54E-24 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase YH65_03465 97eae3a316d40fee33e69b6a626b4c86 251 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 110 233 3.5E-33 T 11-10-2018 IPR007472 N-end rule aminoacyl transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 YH65_03465 97eae3a316d40fee33e69b6a626b4c86 251 PIRSF PIRSF037208 9 246 4.1E-72 T 11-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 YH65_03465 97eae3a316d40fee33e69b6a626b4c86 251 Hamap MF_00689 Aspartate/glutamate leucyltransferase [bpt]. 10 239 36.404 T 11-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 YH65_08390 856a66a0275a39cd358f2f22ace6188d 277 Gene3D G3DSA:3.40.1010.20 3 273 3.9E-89 T 11-10-2018 YH65_08390 856a66a0275a39cd358f2f22ace6188d 277 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 275 3.7E-92 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 YH65_08390 856a66a0275a39cd358f2f22ace6188d 277 Gene3D G3DSA:3.40.1010.20 93 187 3.9E-89 T 11-10-2018 YH65_08390 856a66a0275a39cd358f2f22ace6188d 277 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 277 31.537 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 YH65_08390 856a66a0275a39cd358f2f22ace6188d 277 Gene3D G3DSA:3.40.50.11270 12 92 3.9E-89 T 11-10-2018 YH65_08390 856a66a0275a39cd358f2f22ace6188d 277 Pfam PF02401 LytB protein 3 273 8.4E-85 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 YH65_04405 5decba5731c5613904bc36dc4e3a1dda 156 SUPERFAMILY SSF143422 1 140 4.84E-31 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 YH65_04405 5decba5731c5613904bc36dc4e3a1dda 156 Pfam PF01797 Transposase IS200 like 12 133 1.0E-12 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YH65_04405 5decba5731c5613904bc36dc4e3a1dda 156 Gene3D G3DSA:3.30.70.1290 1 156 6.9E-36 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 YH65_04405 5decba5731c5613904bc36dc4e3a1dda 156 SMART SM01321 9 134 3.0E-32 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YH65_05930 52b2362e37311f2072493f6303446742 462 SUPERFAMILY SSF51905 47 457 2.72E-20 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_05930 52b2362e37311f2072493f6303446742 462 Gene3D G3DSA:3.50.50.60 163 321 2.2E-72 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_05930 52b2362e37311f2072493f6303446742 462 SUPERFAMILY SSF51905 48 169 1.5E-25 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_05930 52b2362e37311f2072493f6303446742 462 Gene3D G3DSA:3.50.50.60 51 386 2.2E-72 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_05930 52b2362e37311f2072493f6303446742 462 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 50 162 1.1E-13 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YH65_07205 35da1ecd7bc1f34b226e023ae600bbb4 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 3.2E-26 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_07205 35da1ecd7bc1f34b226e023ae600bbb4 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 15.822 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_07205 35da1ecd7bc1f34b226e023ae600bbb4 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 11-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YH65_07205 35da1ecd7bc1f34b226e023ae600bbb4 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 42 3.0E-15 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_07205 35da1ecd7bc1f34b226e023ae600bbb4 44 Pfam PF00468 Ribosomal protein L34 1 44 2.2E-24 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_00405 2cb2641531d1a4861b916a55bde7677f 156 SUPERFAMILY SSF51261 4 155 2.62E-51 T 11-10-2018 IPR011055 Duplicated hybrid motif YH65_00405 2cb2641531d1a4861b916a55bde7677f 156 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 12 131 9.8E-43 T 11-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 YH65_00405 2cb2641531d1a4861b916a55bde7677f 156 Gene3D G3DSA:2.70.70.10 5 156 1.8E-52 T 11-10-2018 IPR011055 Duplicated hybrid motif YH65_00405 2cb2641531d1a4861b916a55bde7677f 156 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 11 135 4.4E-46 T 11-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 YH65_10970 48551e5e845ca5d61306f184ff740bd2 212 SMART SM00671 156 191 1.0E-5 T 11-10-2018 IPR006597 Sel1-like repeat YH65_10970 48551e5e845ca5d61306f184ff740bd2 212 SMART SM00671 120 155 1.4E-8 T 11-10-2018 IPR006597 Sel1-like repeat YH65_10970 48551e5e845ca5d61306f184ff740bd2 212 SMART SM00671 46 81 1.3E-12 T 11-10-2018 IPR006597 Sel1-like repeat YH65_10970 48551e5e845ca5d61306f184ff740bd2 212 SMART SM00671 82 119 26.0 T 11-10-2018 IPR006597 Sel1-like repeat YH65_10970 48551e5e845ca5d61306f184ff740bd2 212 Gene3D G3DSA:1.25.40.10 101 209 6.6E-29 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YH65_10970 48551e5e845ca5d61306f184ff740bd2 212 Pfam PF08238 Sel1 repeat 46 81 4.6E-10 T 11-10-2018 IPR006597 Sel1-like repeat YH65_10970 48551e5e845ca5d61306f184ff740bd2 212 Pfam PF08238 Sel1 repeat 121 155 1.7E-9 T 11-10-2018 IPR006597 Sel1-like repeat YH65_10970 48551e5e845ca5d61306f184ff740bd2 212 Pfam PF08238 Sel1 repeat 156 191 3.2E-5 T 11-10-2018 IPR006597 Sel1-like repeat YH65_10970 48551e5e845ca5d61306f184ff740bd2 212 Pfam PF08238 Sel1 repeat 83 118 0.061 T 11-10-2018 IPR006597 Sel1-like repeat YH65_10970 48551e5e845ca5d61306f184ff740bd2 212 Gene3D G3DSA:1.25.40.10 9 100 6.5E-20 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YH65_10970 48551e5e845ca5d61306f184ff740bd2 212 SUPERFAMILY SSF81901 19 199 4.71E-44 T 11-10-2018 YH65_05300 6cb4658a0f466ee9c37085fb509f4199 877 Pfam PF08264 Anticodon-binding domain of tRNA 619 745 2.9E-30 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 YH65_05300 6cb4658a0f466ee9c37085fb509f4199 877 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 50 61 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 YH65_05300 6cb4658a0f466ee9c37085fb509f4199 877 Gene3D G3DSA:1.10.730.10 8 744 2.8E-295 T 11-10-2018 YH65_05300 6cb4658a0f466ee9c37085fb509f4199 877 Gene3D G3DSA:3.90.740.10 182 348 2.8E-295 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 YH65_05300 6cb4658a0f466ee9c37085fb509f4199 877 SUPERFAMILY SSF47323 589 796 1.01E-41 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 YH65_05300 6cb4658a0f466ee9c37085fb509f4199 877 SUPERFAMILY SSF52374 7 587 7.04E-131 T 11-10-2018 YH65_05300 6cb4658a0f466ee9c37085fb509f4199 877 Gene3D G3DSA:1.10.287.380 807 876 7.3E-12 T 11-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 YH65_05300 6cb4658a0f466ee9c37085fb509f4199 877 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 18 577 6.1E-189 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 YH65_05300 6cb4658a0f466ee9c37085fb509f4199 877 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 876 14.765 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 YH65_05300 6cb4658a0f466ee9c37085fb509f4199 877 SUPERFAMILY SSF50677 197 347 3.66E-62 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 YH65_05300 6cb4658a0f466ee9c37085fb509f4199 877 PRINTS PR00986 Valyl-tRNA synthetase signature 43 54 1.0E-27 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 YH65_05300 6cb4658a0f466ee9c37085fb509f4199 877 PRINTS PR00986 Valyl-tRNA synthetase signature 236 253 1.0E-27 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 YH65_05300 6cb4658a0f466ee9c37085fb509f4199 877 PRINTS PR00986 Valyl-tRNA synthetase signature 351 364 1.0E-27 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 YH65_05300 6cb4658a0f466ee9c37085fb509f4199 877 PRINTS PR00986 Valyl-tRNA synthetase signature 449 470 1.0E-27 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 YH65_05300 6cb4658a0f466ee9c37085fb509f4199 877 TIGRFAM TIGR00422 valS: valine--tRNA ligase 7 858 0.0 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 YH65_05300 6cb4658a0f466ee9c37085fb509f4199 877 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 811 874 6.7E-14 T 11-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 YH65_05300 6cb4658a0f466ee9c37085fb509f4199 877 SUPERFAMILY SSF46589 811 874 4.45E-14 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 YH65_05300 6cb4658a0f466ee9c37085fb509f4199 877 Gene3D G3DSA:3.40.50.620 25 538 2.8E-295 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YH65_05005 ea1c708c9424d649ec7a45136092fd7e 490 Gene3D G3DSA:3.40.220.10 1 150 1.3E-34 T 11-10-2018 YH65_05005 ea1c708c9424d649ec7a45136092fd7e 490 Gene3D G3DSA:3.40.630.10 151 487 1.8E-126 T 11-10-2018 YH65_05005 ea1c708c9424d649ec7a45136092fd7e 490 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 167 476 4.9E-109 T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 YH65_05005 ea1c708c9424d649ec7a45136092fd7e 490 PRINTS PR00481 Cytosol aminopeptidase signature 324 344 9.0E-49 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 YH65_05005 ea1c708c9424d649ec7a45136092fd7e 490 PRINTS PR00481 Cytosol aminopeptidase signature 353 368 9.0E-49 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 YH65_05005 ea1c708c9424d649ec7a45136092fd7e 490 PRINTS PR00481 Cytosol aminopeptidase signature 265 286 9.0E-49 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 YH65_05005 ea1c708c9424d649ec7a45136092fd7e 490 PRINTS PR00481 Cytosol aminopeptidase signature 302 323 9.0E-49 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 YH65_05005 ea1c708c9424d649ec7a45136092fd7e 490 PRINTS PR00481 Cytosol aminopeptidase signature 243 260 9.0E-49 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 YH65_05005 ea1c708c9424d649ec7a45136092fd7e 490 SUPERFAMILY SSF52949 1 163 2.12E-10 T 11-10-2018 YH65_05005 ea1c708c9424d649ec7a45136092fd7e 490 SUPERFAMILY SSF53187 163 481 5.02E-105 T 11-10-2018 YH65_05005 ea1c708c9424d649ec7a45136092fd7e 490 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 64 127 2.8E-7 T 11-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 YH65_05005 ea1c708c9424d649ec7a45136092fd7e 490 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 328 335 - T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 YH65_05005 ea1c708c9424d649ec7a45136092fd7e 490 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 4 485 31.28 T 11-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 YH65_01970 de10af9438eb7ffe8c15f2f9f8de291b 160 Pfam PF04390 Lipopolysaccharide-assembly 27 136 1.5E-6 T 11-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 YH65_07200 36a1c76a3ee5dc6f1cade01a0ea8cbd3 111 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 4 108 2.8E-19 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 YH65_07200 36a1c76a3ee5dc6f1cade01a0ea8cbd3 111 Pfam PF00825 Ribonuclease P 4 105 4.7E-23 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 YH65_07200 36a1c76a3ee5dc6f1cade01a0ea8cbd3 111 SUPERFAMILY SSF54211 2 107 1.16E-23 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold YH65_07200 36a1c76a3ee5dc6f1cade01a0ea8cbd3 111 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 49 63 - T 11-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 YH65_07200 36a1c76a3ee5dc6f1cade01a0ea8cbd3 111 Gene3D G3DSA:3.30.230.10 1 111 2.5E-28 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YH65_07200 36a1c76a3ee5dc6f1cade01a0ea8cbd3 111 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 1 108 14.667 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 YH65_07200 36a1c76a3ee5dc6f1cade01a0ea8cbd3 111 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 10 96 6.0E-13 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 YH65_05475 6edaa339c1c7f39a9af8d1c3ee502468 255 Gene3D G3DSA:1.10.10.10 191 255 1.4E-6 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YH65_05475 6edaa339c1c7f39a9af8d1c3ee502468 255 SUPERFAMILY SSF88659 221 252 1.37E-5 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like YH65_05475 6edaa339c1c7f39a9af8d1c3ee502468 255 Gene3D G3DSA:3.30.70.1290 4 166 1.7E-39 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 YH65_05475 6edaa339c1c7f39a9af8d1c3ee502468 255 SUPERFAMILY SSF143422 10 125 1.1E-26 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 YH65_05475 6edaa339c1c7f39a9af8d1c3ee502468 255 Pfam PF01797 Transposase IS200 like 12 122 8.6E-18 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YH65_05475 6edaa339c1c7f39a9af8d1c3ee502468 255 SMART SM01321 8 122 3.7E-36 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YH65_05475 6edaa339c1c7f39a9af8d1c3ee502468 255 Pfam PF13384 Homeodomain-like domain 215 252 2.1E-6 T 11-10-2018 YH65_02215 33155b2bc27b653fe2815f0997d8b569 276 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 65 265 1.6E-58 T 11-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 YH65_02215 33155b2bc27b653fe2815f0997d8b569 276 SUPERFAMILY SSF53335 30 269 1.24E-36 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YH65_02215 33155b2bc27b653fe2815f0997d8b569 276 PIRSF PIRSF000401 35 273 7.9E-67 T 11-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 YH65_02215 33155b2bc27b653fe2815f0997d8b569 276 PIRSF PIRSF000401 13 39 350.0 T 11-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 YH65_02215 33155b2bc27b653fe2815f0997d8b569 276 Gene3D G3DSA:3.40.50.150 88 275 2.6E-47 T 11-10-2018 YH65_02215 33155b2bc27b653fe2815f0997d8b569 276 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 58 271 1.2E-59 T 11-10-2018 YH65_02215 33155b2bc27b653fe2815f0997d8b569 276 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 1 271 29.603 T 11-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 YH65_07345 ba28f4bc474aeb580df2dfefe4b11da1 263 Pfam PF01636 Phosphotransferase enzyme family 38 209 4.8E-15 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase YH65_07345 ba28f4bc474aeb580df2dfefe4b11da1 263 Gene3D G3DSA:3.90.1200.10 89 261 4.4E-22 T 11-10-2018 YH65_07345 ba28f4bc474aeb580df2dfefe4b11da1 263 SUPERFAMILY SSF56112 16 250 2.98E-33 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily YH65_09675 55cd14deafbc6125ede050342ecc6b96 194 Gene3D G3DSA:1.10.357.10 4 192 3.4E-31 T 11-10-2018 YH65_09675 55cd14deafbc6125ede050342ecc6b96 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 60 2.5E-13 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YH65_09675 55cd14deafbc6125ede050342ecc6b96 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 1.4E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YH65_09675 55cd14deafbc6125ede050342ecc6b96 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 1.4E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YH65_09675 55cd14deafbc6125ede050342ecc6b96 194 SUPERFAMILY SSF46689 5 85 1.99E-15 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 YH65_09675 55cd14deafbc6125ede050342ecc6b96 194 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site YH65_09675 55cd14deafbc6125ede050342ecc6b96 194 SUPERFAMILY SSF48498 81 169 2.6E-7 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily YH65_04185 b726d6d9231349abb4897f98c4c15d4c 572 Gene3D G3DSA:3.30.70.1430 49 142 1.8E-48 T 11-10-2018 YH65_04185 b726d6d9231349abb4897f98c4c15d4c 572 Gene3D G3DSA:1.20.1640.10 375 554 1.0E-56 T 11-10-2018 YH65_04185 b726d6d9231349abb4897f98c4c15d4c 572 Gene3D G3DSA:3.30.2090.10 191 281 1.8E-48 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YH65_04185 b726d6d9231349abb4897f98c4c15d4c 572 SUPERFAMILY SSF82714 194 278 1.31E-10 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YH65_04185 b726d6d9231349abb4897f98c4c15d4c 572 Gene3D G3DSA:1.20.1640.10 25 48 1.8E-48 T 11-10-2018 YH65_04185 b726d6d9231349abb4897f98c4c15d4c 572 SUPERFAMILY SSF82866 344 539 4.05E-34 T 11-10-2018 YH65_04185 b726d6d9231349abb4897f98c4c15d4c 572 Gene3D G3DSA:3.30.70.1320 319 374 1.0E-56 T 11-10-2018 YH65_04185 b726d6d9231349abb4897f98c4c15d4c 572 PRINTS PR00702 Acriflavin resistance protein family signature 47 65 1.4E-33 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_04185 b726d6d9231349abb4897f98c4c15d4c 572 PRINTS PR00702 Acriflavin resistance protein family signature 404 425 1.4E-33 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_04185 b726d6d9231349abb4897f98c4c15d4c 572 PRINTS PR00702 Acriflavin resistance protein family signature 19 43 1.4E-33 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_04185 b726d6d9231349abb4897f98c4c15d4c 572 PRINTS PR00702 Acriflavin resistance protein family signature 513 536 1.4E-33 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_04185 b726d6d9231349abb4897f98c4c15d4c 572 PRINTS PR00702 Acriflavin resistance protein family signature 432 456 1.4E-33 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_04185 b726d6d9231349abb4897f98c4c15d4c 572 PRINTS PR00702 Acriflavin resistance protein family signature 488 511 1.4E-33 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_04185 b726d6d9231349abb4897f98c4c15d4c 572 Pfam PF00873 AcrB/AcrD/AcrF family 310 544 6.2E-37 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_04185 b726d6d9231349abb4897f98c4c15d4c 572 Pfam PF00873 AcrB/AcrD/AcrF family 14 278 4.5E-32 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_04185 b726d6d9231349abb4897f98c4c15d4c 572 SUPERFAMILY SSF82693 55 143 3.14E-17 T 11-10-2018 YH65_04185 b726d6d9231349abb4897f98c4c15d4c 572 Gene3D G3DSA:3.30.70.1320 143 190 1.8E-48 T 11-10-2018 YH65_01605 ffd5bd467ffe0b721a7542c3dc57e74b 165 SUPERFAMILY SSF46458 17 140 1.82E-16 T 11-10-2018 IPR009050 Globin-like superfamily YH65_01605 ffd5bd467ffe0b721a7542c3dc57e74b 165 Pfam PF01152 Bacterial-like globin 23 127 9.6E-16 T 11-10-2018 IPR001486 Truncated hemoglobin GO:0019825 YH65_01605 ffd5bd467ffe0b721a7542c3dc57e74b 165 Gene3D G3DSA:1.10.490.10 17 164 7.8E-30 T 11-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 YH65_02550 633dac5b6d0d498536517a6c40a2ecf8 425 Gene3D G3DSA:1.20.120.160 317 419 7.2E-12 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 YH65_02550 633dac5b6d0d498536517a6c40a2ecf8 425 SUPERFAMILY SSF47226 329 401 2.36E-11 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 YH65_00235 3970043435f6b9428b1951041b53787b 432 Gene3D G3DSA:3.40.1190.10 58 283 6.9E-57 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 YH65_00235 3970043435f6b9428b1951041b53787b 432 SUPERFAMILY SSF53623 58 278 4.06E-52 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 YH65_00235 3970043435f6b9428b1951041b53787b 432 Pfam PF02875 Mur ligase family, glutamate ligase domain 280 358 1.6E-16 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 YH65_00235 3970043435f6b9428b1951041b53787b 432 Pfam PF08245 Mur ligase middle domain 65 258 6.7E-37 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 YH65_00235 3970043435f6b9428b1951041b53787b 432 SUPERFAMILY SSF53244 280 429 1.3E-43 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 YH65_00235 3970043435f6b9428b1951041b53787b 432 Gene3D G3DSA:3.90.190.20 284 431 7.2E-51 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 YH65_00235 3970043435f6b9428b1951041b53787b 432 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 56 427 4.6E-119 T 11-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 YH65_01910 dd2256c37523cf045e0e65976c1c761d 91 Gene3D G3DSA:3.30.70.20 2 83 1.3E-23 T 11-10-2018 YH65_01910 dd2256c37523cf045e0e65976c1c761d 91 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YH65_01910 dd2256c37523cf045e0e65976c1c761d 91 SUPERFAMILY SSF54862 3 69 1.42E-15 T 11-10-2018 YH65_01910 dd2256c37523cf045e0e65976c1c761d 91 Pfam PF12838 4Fe-4S dicluster domain 8 63 6.1E-8 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YH65_10150 ac62ce75531572df196a5608a10051ef 271 Gene3D G3DSA:1.10.760.10 119 193 2.5E-14 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_10150 ac62ce75531572df196a5608a10051ef 271 SUPERFAMILY SSF46626 61 190 4.37E-14 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_10150 ac62ce75531572df196a5608a10051ef 271 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 42 88 5.4E-17 T 11-10-2018 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal YH65_10150 ac62ce75531572df196a5608a10051ef 271 PIRSF PIRSF000006 12 271 2.8E-49 T 11-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III YH65_10150 ac62ce75531572df196a5608a10051ef 271 Gene3D G3DSA:1.20.58.1490 8 101 1.3E-10 T 11-10-2018 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily YH65_10150 ac62ce75531572df196a5608a10051ef 271 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 119 185 1.8E-7 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YH65_10150 ac62ce75531572df196a5608a10051ef 271 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 203 265 2.3E-11 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YH65_10150 ac62ce75531572df196a5608a10051ef 271 Gene3D G3DSA:1.10.760.10 194 270 7.5E-16 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_10150 ac62ce75531572df196a5608a10051ef 271 PRINTS PR00605 Class IC cytochrome C signature 243 265 1.4E-5 T 11-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 YH65_10150 ac62ce75531572df196a5608a10051ef 271 PRINTS PR00605 Class IC cytochrome C signature 203 214 1.4E-5 T 11-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 YH65_10150 ac62ce75531572df196a5608a10051ef 271 SUPERFAMILY SSF46626 196 268 3.2E-17 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_01635 517cb8654e517893c4e881e3d3c1b5c1 376 Pfam PF02661 Fic/DOC family 116 223 1.7E-19 T 11-10-2018 IPR003812 Fido domain YH65_01635 517cb8654e517893c4e881e3d3c1b5c1 376 Gene3D G3DSA:1.10.3290.10 32 296 2.6E-47 T 11-10-2018 IPR036597 Fido-like domain superfamily YH65_01635 517cb8654e517893c4e881e3d3c1b5c1 376 SUPERFAMILY SSF140931 107 297 5.62E-34 T 11-10-2018 IPR036597 Fido-like domain superfamily YH65_01635 517cb8654e517893c4e881e3d3c1b5c1 376 Pfam PF13776 Domain of unknown function (DUF4172) 7 86 9.6E-25 T 11-10-2018 IPR025230 Domain of unknown function DUF4172 YH65_06535 2fc787bdcb2f0ae3641cd7c718ec6ada 162 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 2.3E-25 T 11-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 YH65_06535 2fc787bdcb2f0ae3641cd7c718ec6ada 162 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 154 3.8E-56 T 11-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 YH65_06535 2fc787bdcb2f0ae3641cd7c718ec6ada 162 Gene3D G3DSA:3.10.50.30 78 156 5.1E-27 T 11-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 YH65_06535 2fc787bdcb2f0ae3641cd7c718ec6ada 162 Gene3D G3DSA:1.10.287.180 1 75 3.9E-25 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 YH65_06535 2fc787bdcb2f0ae3641cd7c718ec6ada 162 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 82 156 1.2E-27 T 11-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 YH65_06535 2fc787bdcb2f0ae3641cd7c718ec6ada 162 SUPERFAMILY SSF46557 5 78 7.59E-24 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 YH65_06535 2fc787bdcb2f0ae3641cd7c718ec6ada 162 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 30.071 T 11-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 YH65_06535 2fc787bdcb2f0ae3641cd7c718ec6ada 162 PIRSF PIRSF006092 1 158 4.4E-48 T 11-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 YH65_06535 2fc787bdcb2f0ae3641cd7c718ec6ada 162 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 11-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 YH65_06535 2fc787bdcb2f0ae3641cd7c718ec6ada 162 SUPERFAMILY SSF54534 81 156 6.41E-23 T 11-10-2018 YH65_04100 4a9b56e604fa33dbb4c0e1629b05cab0 970 SUPERFAMILY SSF52540 86 560 8.85E-8 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_04100 4a9b56e604fa33dbb4c0e1629b05cab0 970 Gene3D G3DSA:3.40.50.300 79 273 2.5E-9 T 11-10-2018 YH65_04100 4a9b56e604fa33dbb4c0e1629b05cab0 970 Pfam PF04851 Type III restriction enzyme, res subunit 82 257 4.7E-20 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 YH65_04100 4a9b56e604fa33dbb4c0e1629b05cab0 970 SUPERFAMILY SSF52540 10 280 5.7E-11 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_04100 4a9b56e604fa33dbb4c0e1629b05cab0 970 Gene3D G3DSA:3.40.50.300 359 579 4.2E-7 T 11-10-2018 YH65_08500 25d37abc11e197f0e2ce027f8b39cb5c 210 SUPERFAMILY SSF51391 10 195 5.49E-50 T 11-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 YH65_08500 25d37abc11e197f0e2ce027f8b39cb5c 210 Pfam PF02581 Thiamine monophosphate synthase 20 187 8.1E-45 T 11-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 YH65_08500 25d37abc11e197f0e2ce027f8b39cb5c 210 Gene3D G3DSA:3.20.20.70 4 206 3.7E-49 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YH65_02610 c1e3dea31c093ccf107a853ba3c22d3a 337 SUPERFAMILY SSF56059 125 326 4.6E-23 T 11-10-2018 YH65_02610 c1e3dea31c093ccf107a853ba3c22d3a 337 Gene3D G3DSA:3.30.1490.20 108 194 3.6E-21 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 YH65_02610 c1e3dea31c093ccf107a853ba3c22d3a 337 Gene3D G3DSA:3.30.470.20 195 293 3.6E-21 T 11-10-2018 YH65_02610 c1e3dea31c093ccf107a853ba3c22d3a 337 Gene3D G3DSA:3.40.50.20 57 107 3.6E-21 T 11-10-2018 YH65_09670 406c9be3b9f70250766f674cdb411919 415 SUPERFAMILY SSF56954 3 409 2.75E-54 T 11-10-2018 YH65_09670 406c9be3b9f70250766f674cdb411919 415 Gene3D G3DSA:1.20.1600.10 14 411 6.0E-51 T 11-10-2018 YH65_09670 406c9be3b9f70250766f674cdb411919 415 Pfam PF02321 Outer membrane efflux protein 228 405 9.5E-19 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 YH65_09670 406c9be3b9f70250766f674cdb411919 415 Pfam PF02321 Outer membrane efflux protein 23 203 5.4E-22 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 YH65_02470 2927f3dda3b9edcc69a4e424c4c54261 266 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 1 265 3.3E-113 T 11-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 YH65_02470 2927f3dda3b9edcc69a4e424c4c54261 266 Gene3D G3DSA:3.20.20.70 1 266 3.4E-94 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YH65_02470 2927f3dda3b9edcc69a4e424c4c54261 266 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 1 266 46.626 T 11-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 YH65_02470 2927f3dda3b9edcc69a4e424c4c54261 266 SUPERFAMILY SSF51569 2 265 2.84E-88 T 11-10-2018 YH65_02470 2927f3dda3b9edcc69a4e424c4c54261 266 Pfam PF00793 DAHP synthetase I family 1 263 1.1E-58 T 11-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 YH65_03370 e873775402206b3f11be67fbad87476c 717 Pfam PF02824 TGS domain 398 457 1.6E-16 T 11-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 YH65_03370 e873775402206b3f11be67fbad87476c 717 SUPERFAMILY SSF55021 637 709 6.7E-5 T 11-10-2018 YH65_03370 e873775402206b3f11be67fbad87476c 717 Pfam PF04607 Region found in RelA / SpoT proteins 255 363 3.3E-32 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 YH65_03370 e873775402206b3f11be67fbad87476c 717 SUPERFAMILY SSF81301 209 368 5.23E-51 T 11-10-2018 YH65_03370 e873775402206b3f11be67fbad87476c 717 SMART SM00954 255 364 5.6E-59 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 YH65_03370 e873775402206b3f11be67fbad87476c 717 Gene3D G3DSA:1.10.3210.10 25 207 5.2E-67 T 11-10-2018 YH65_03370 e873775402206b3f11be67fbad87476c 717 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 35 692 5.8E-204 T 11-10-2018 IPR004811 RelA/SpoT family GO:0015969 YH65_03370 e873775402206b3f11be67fbad87476c 717 Pfam PF13328 HD domain 35 192 9.0E-45 T 11-10-2018 IPR003607 HD/PDEase domain YH65_03370 e873775402206b3f11be67fbad87476c 717 Gene3D G3DSA:3.10.20.30 391 465 3.1E-25 T 11-10-2018 IPR012675 Beta-grasp domain superfamily YH65_03370 e873775402206b3f11be67fbad87476c 717 Gene3D G3DSA:3.30.460.10 210 343 2.0E-39 T 11-10-2018 YH65_03370 e873775402206b3f11be67fbad87476c 717 SMART SM00471 50 170 9.4E-11 T 11-10-2018 IPR003607 HD/PDEase domain YH65_03370 e873775402206b3f11be67fbad87476c 717 SUPERFAMILY SSF81271 385 457 3.11E-18 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 YH65_03370 e873775402206b3f11be67fbad87476c 717 SUPERFAMILY SSF109604 28 207 3.64E-63 T 11-10-2018 YH65_09495 739179d97943981f54ac88959d08d600 549 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 51 110 1.9E-11 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 YH65_09495 739179d97943981f54ac88959d08d600 549 SUPERFAMILY SSF56014 354 473 4.06E-18 T 11-10-2018 YH65_09495 739179d97943981f54ac88959d08d600 549 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 393 409 - T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 YH65_09495 739179d97943981f54ac88959d08d600 549 SUPERFAMILY SSF56014 121 278 7.2E-32 T 11-10-2018 YH65_09495 739179d97943981f54ac88959d08d600 549 PRINTS PR00397 Sirohaem Fe-binding site signature 353 371 1.0E-5 T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 YH65_09495 739179d97943981f54ac88959d08d600 549 PRINTS PR00397 Sirohaem Fe-binding site signature 393 411 1.0E-5 T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 YH65_09495 739179d97943981f54ac88959d08d600 549 Gene3D G3DSA:3.90.480.20 4 344 7.7E-67 T 11-10-2018 YH65_09495 739179d97943981f54ac88959d08d600 549 Gene3D G3DSA:3.30.413.10 352 468 7.8E-19 T 11-10-2018 YH65_09495 739179d97943981f54ac88959d08d600 549 SUPERFAMILY SSF55124 1 117 4.42E-22 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 YH65_09495 739179d97943981f54ac88959d08d600 549 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 389 464 2.7E-4 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 YH65_09495 739179d97943981f54ac88959d08d600 549 Gene3D G3DSA:3.30.413.10 112 284 7.7E-67 T 11-10-2018 YH65_09495 739179d97943981f54ac88959d08d600 549 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 121 266 3.3E-19 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 YH65_04475 113625df8d021b54177d67d44a2c44ad 369 Gene3D G3DSA:2.40.10.350 158 241 3.3E-10 T 11-10-2018 YH65_04475 113625df8d021b54177d67d44a2c44ad 369 Pfam PF04085 rod shape-determining protein MreC 158 246 1.0E-13 T 11-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 YH65_05640 8f941fcbca88eccb58c1476c28ab1a5e 417 Gene3D G3DSA:2.40.30.10 196 359 4.6E-117 T 11-10-2018 YH65_05640 8f941fcbca88eccb58c1476c28ab1a5e 417 SUPERFAMILY SSF160996 197 360 3.66E-29 T 11-10-2018 YH65_05640 8f941fcbca88eccb58c1476c28ab1a5e 417 Gene3D G3DSA:1.10.8.260 278 342 4.6E-117 T 11-10-2018 IPR023166 HI0933-like insert domain superfamily YH65_05640 8f941fcbca88eccb58c1476c28ab1a5e 417 Gene3D G3DSA:3.50.50.60 11 411 4.6E-117 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_05640 8f941fcbca88eccb58c1476c28ab1a5e 417 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 163 172 4.8E-9 T 11-10-2018 YH65_05640 8f941fcbca88eccb58c1476c28ab1a5e 417 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 9 31 4.8E-9 T 11-10-2018 YH65_05640 8f941fcbca88eccb58c1476c28ab1a5e 417 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 160 178 5.0E-9 T 11-10-2018 YH65_05640 8f941fcbca88eccb58c1476c28ab1a5e 417 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 367 389 5.0E-9 T 11-10-2018 YH65_05640 8f941fcbca88eccb58c1476c28ab1a5e 417 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 5.0E-9 T 11-10-2018 YH65_05640 8f941fcbca88eccb58c1476c28ab1a5e 417 SUPERFAMILY SSF51905 6 411 2.2E-57 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_05640 8f941fcbca88eccb58c1476c28ab1a5e 417 Pfam PF03486 HI0933-like protein 8 412 2.5E-119 T 11-10-2018 YH65_05640 8f941fcbca88eccb58c1476c28ab1a5e 417 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 10 411 7.4E-135 T 11-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like YH65_08980 840d833688ccc399e3daa2b75be80baf 730 SMART SM00448 471 586 1.1E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YH65_08980 840d833688ccc399e3daa2b75be80baf 730 SMART SM00387 186 297 1.0E-15 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YH65_08980 840d833688ccc399e3daa2b75be80baf 730 Gene3D G3DSA:3.40.50.2300 468 602 2.7E-36 T 11-10-2018 YH65_08980 840d833688ccc399e3daa2b75be80baf 730 SUPERFAMILY SSF52172 469 594 4.55E-33 T 11-10-2018 IPR011006 CheY-like superfamily YH65_08980 840d833688ccc399e3daa2b75be80baf 730 Pfam PF00072 Response regulator receiver domain 473 586 6.9E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YH65_08980 840d833688ccc399e3daa2b75be80baf 730 SUPERFAMILY SSF55874 129 299 1.14E-27 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YH65_08980 840d833688ccc399e3daa2b75be80baf 730 PRINTS PR00344 Bacterial sensor protein C-terminal signature 227 241 2.4E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YH65_08980 840d833688ccc399e3daa2b75be80baf 730 PRINTS PR00344 Bacterial sensor protein C-terminal signature 257 275 2.4E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YH65_08980 840d833688ccc399e3daa2b75be80baf 730 PRINTS PR00344 Bacterial sensor protein C-terminal signature 245 255 2.4E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YH65_08980 840d833688ccc399e3daa2b75be80baf 730 PRINTS PR00344 Bacterial sensor protein C-terminal signature 281 294 2.4E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YH65_08980 840d833688ccc399e3daa2b75be80baf 730 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 186 296 2.1E-14 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YH65_08980 840d833688ccc399e3daa2b75be80baf 730 Gene3D G3DSA:3.30.565.10 140 302 8.1E-29 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YH65_04240 641c1df4044cd7837c9f36ba7b5756d6 774 Gene3D G3DSA:3.40.228.10 173 376 4.7E-174 T 11-10-2018 YH65_04240 641c1df4044cd7837c9f36ba7b5756d6 774 Gene3D G3DSA:2.20.25.90 34 93 8.2E-20 T 11-10-2018 YH65_04240 641c1df4044cd7837c9f36ba7b5756d6 774 Pfam PF00384 Molybdopterin oxidoreductase 95 523 1.0E-82 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_04240 641c1df4044cd7837c9f36ba7b5756d6 774 SUPERFAMILY SSF53706 36 622 2.75E-182 T 11-10-2018 YH65_04240 641c1df4044cd7837c9f36ba7b5756d6 774 SMART SM00926 38 92 8.7E-20 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_04240 641c1df4044cd7837c9f36ba7b5756d6 774 SUPERFAMILY SSF50692 594 730 4.21E-33 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily YH65_04240 641c1df4044cd7837c9f36ba7b5756d6 774 Gene3D G3DSA:3.40.50.740 100 575 4.7E-174 T 11-10-2018 YH65_04240 641c1df4044cd7837c9f36ba7b5756d6 774 Gene3D G3DSA:2.40.40.20 611 732 5.6E-36 T 11-10-2018 YH65_04240 641c1df4044cd7837c9f36ba7b5756d6 774 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 39 88 2.2E-16 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_04240 641c1df4044cd7837c9f36ba7b5756d6 774 PIRSF PIRSF000144 82 471 2.3E-40 T 11-10-2018 YH65_04240 641c1df4044cd7837c9f36ba7b5756d6 774 PIRSF PIRSF000144 578 736 0.061 T 11-10-2018 YH65_04240 641c1df4044cd7837c9f36ba7b5756d6 774 Pfam PF01568 Molydopterin dinucleotide binding domain 620 727 8.7E-23 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 YH65_04240 641c1df4044cd7837c9f36ba7b5756d6 774 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 43 60 - T 11-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 YH65_04875 e07bbe9a675d34ea04dd55b3afa5b4b1 140 SUPERFAMILY SSF75620 11 113 4.71E-12 T 11-10-2018 YH65_04875 e07bbe9a675d34ea04dd55b3afa5b4b1 140 Pfam PF00472 RF-1 domain 10 132 9.2E-23 T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 YH65_04875 e07bbe9a675d34ea04dd55b3afa5b4b1 140 Gene3D G3DSA:3.30.160.20 3 140 7.1E-38 T 11-10-2018 YH65_03585 a234632e185d8f02da36d55d5dae7a79 531 TIGRFAM TIGR02519 pilus_MshL: pilus (MSHA type) biogenesis protein MshL 221 512 2.1E-77 T 11-10-2018 IPR013358 Pilus biogenesis, MshL YH65_03585 a234632e185d8f02da36d55d5dae7a79 531 Pfam PF07655 Secretin N-terminal domain 114 200 4.0E-15 T 11-10-2018 IPR011514 Secretin, N-terminal GO:0009297|GO:0019867 YH65_03585 a234632e185d8f02da36d55d5dae7a79 531 Pfam PF00263 Bacterial type II and III secretion system protein 341 513 1.3E-43 T 11-10-2018 IPR004846 Type II/III secretion system GO:0009306 YH65_03585 a234632e185d8f02da36d55d5dae7a79 531 PRINTS PR00811 Bacterial general secretion pathway protein D signature 477 495 8.3E-13 T 11-10-2018 IPR001775 GspD/PilQ family YH65_03585 a234632e185d8f02da36d55d5dae7a79 531 PRINTS PR00811 Bacterial general secretion pathway protein D signature 255 265 8.3E-13 T 11-10-2018 IPR001775 GspD/PilQ family YH65_03585 a234632e185d8f02da36d55d5dae7a79 531 PRINTS PR00811 Bacterial general secretion pathway protein D signature 336 360 8.3E-13 T 11-10-2018 IPR001775 GspD/PilQ family YH65_03585 a234632e185d8f02da36d55d5dae7a79 531 PRINTS PR00811 Bacterial general secretion pathway protein D signature 500 514 8.3E-13 T 11-10-2018 IPR001775 GspD/PilQ family YH65_05465 759a26a3cc111df7b2a5e1d347962326 170 Gene3D G3DSA:3.40.50.1820 12 170 2.5E-12 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold YH65_05465 759a26a3cc111df7b2a5e1d347962326 170 SUPERFAMILY SSF53474 18 168 5.5E-14 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold YH65_05465 759a26a3cc111df7b2a5e1d347962326 170 Pfam PF00561 alpha/beta hydrolase fold 20 107 1.4E-7 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 YH65_02075 26d859a877bc69546004edb7c01842ef 508 SUPERFAMILY SSF53067 130 303 4.12E-35 T 11-10-2018 YH65_02075 26d859a877bc69546004edb7c01842ef 508 Gene3D G3DSA:1.10.3210.10 314 496 1.7E-10 T 11-10-2018 YH65_02075 26d859a877bc69546004edb7c01842ef 508 PIRSF PIRSF001267 1 485 2.0E-75 T 11-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 YH65_02075 26d859a877bc69546004edb7c01842ef 508 Gene3D G3DSA:3.30.420.150 111 290 1.3E-72 T 11-10-2018 YH65_02075 26d859a877bc69546004edb7c01842ef 508 Pfam PF02541 Ppx/GppA phosphatase family 19 303 4.0E-58 T 11-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 YH65_02075 26d859a877bc69546004edb7c01842ef 508 SUPERFAMILY SSF53067 3 126 8.79E-32 T 11-10-2018 YH65_02075 26d859a877bc69546004edb7c01842ef 508 Gene3D G3DSA:3.30.420.40 6 297 1.3E-72 T 11-10-2018 YH65_02075 26d859a877bc69546004edb7c01842ef 508 SUPERFAMILY SSF109604 315 472 2.67E-12 T 11-10-2018 YH65_04300 8d0a9973050cbdac490b4e1c05f9e6b4 299 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 1 299 25.996 T 11-10-2018 IPR003770 Endolytic murein transglycosylase YH65_04300 8d0a9973050cbdac490b4e1c05f9e6b4 299 Pfam PF02618 YceG-like family 25 297 3.7E-57 T 11-10-2018 IPR003770 Endolytic murein transglycosylase YH65_04300 8d0a9973050cbdac490b4e1c05f9e6b4 299 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 17 297 4.7E-35 T 11-10-2018 IPR003770 Endolytic murein transglycosylase YH65_01025 b6c383a06a703fec4af688a0cd37e3a4 422 SUPERFAMILY SSF53448 223 410 5.06E-5 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YH65_01025 b6c383a06a703fec4af688a0cd37e3a4 422 Pfam PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) 241 310 2.9E-6 T 11-10-2018 IPR002654 Glycosyl transferase, family 25 YH65_04075 f35f1ce72a70ed77cfed2c192c5e3687 747 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 14 128 1.8E-10 T 11-10-2018 IPR025199 DNA translocase FtsK, 4TM region YH65_04075 f35f1ce72a70ed77cfed2c192c5e3687 747 Pfam PF01580 FtsK/SpoIIIE family 534 584 6.9E-13 T 11-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 YH65_04075 f35f1ce72a70ed77cfed2c192c5e3687 747 Pfam PF01580 FtsK/SpoIIIE family 394 530 1.1E-48 T 11-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 YH65_04075 f35f1ce72a70ed77cfed2c192c5e3687 747 Gene3D G3DSA:3.30.980.40 286 389 1.2E-33 T 11-10-2018 YH65_04075 f35f1ce72a70ed77cfed2c192c5e3687 747 Pfam PF09397 Ftsk gamma domain 689 747 7.5E-24 T 11-10-2018 IPR018541 FtsK gamma domain YH65_04075 f35f1ce72a70ed77cfed2c192c5e3687 747 SUPERFAMILY SSF52540 368 656 1.62E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_04075 f35f1ce72a70ed77cfed2c192c5e3687 747 Gene3D G3DSA:3.40.50.300 391 669 1.5E-106 T 11-10-2018 YH65_04075 f35f1ce72a70ed77cfed2c192c5e3687 747 SMART SM00382 429 608 0.0023 T 11-10-2018 IPR003593 AAA+ ATPase domain YH65_04075 f35f1ce72a70ed77cfed2c192c5e3687 747 SUPERFAMILY SSF46785 688 747 7.89E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YH65_04075 f35f1ce72a70ed77cfed2c192c5e3687 747 SMART SM00843 686 747 5.9E-27 T 11-10-2018 IPR018541 FtsK gamma domain YH65_04075 f35f1ce72a70ed77cfed2c192c5e3687 747 Gene3D G3DSA:1.10.10.10 680 747 2.2E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YH65_10990 b63dbb95bbc06cfcaef5a4528f8168b7 164 Gene3D G3DSA:3.10.20.80 1 72 1.2E-31 T 11-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 YH65_10990 b63dbb95bbc06cfcaef5a4528f8168b7 164 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 1 164 26.77 T 11-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 YH65_10990 b63dbb95bbc06cfcaef5a4528f8168b7 164 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 77 161 9.8E-32 T 11-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 YH65_10990 b63dbb95bbc06cfcaef5a4528f8168b7 164 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 1 164 1.6E-64 T 11-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 YH65_10990 b63dbb95bbc06cfcaef5a4528f8168b7 164 Gene3D G3DSA:3.30.110.10 73 164 6.1E-34 T 11-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 YH65_10990 b63dbb95bbc06cfcaef5a4528f8168b7 164 SUPERFAMILY SSF55200 77 164 6.41E-30 T 11-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 YH65_10990 b63dbb95bbc06cfcaef5a4528f8168b7 164 SUPERFAMILY SSF54364 1 72 2.09E-27 T 11-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 YH65_10990 b63dbb95bbc06cfcaef5a4528f8168b7 164 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 1 70 3.3E-30 T 11-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 YH65_00880 0ed07ab1872621343cec0f4b1f16e0de 216 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 7 201 6.4E-16 T 11-10-2018 YH65_04215 1c13332a4c72e1d69c2ab379f7deea9a 148 Pfam PF00156 Phosphoribosyl transferase domain 12 145 1.9E-24 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 YH65_04215 1c13332a4c72e1d69c2ab379f7deea9a 148 SUPERFAMILY SSF53271 2 138 3.18E-23 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like YH65_04215 1c13332a4c72e1d69c2ab379f7deea9a 148 Gene3D G3DSA:3.40.50.2020 1 146 5.0E-30 T 11-10-2018 YH65_10585 5286f8a246ae7dbd0b963c0cf94241e4 112 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 4 102 2.3E-33 T 11-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_10585 5286f8a246ae7dbd0b963c0cf94241e4 112 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 105 22.303 T 11-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_10585 5286f8a246ae7dbd0b963c0cf94241e4 112 Pfam PF00237 Ribosomal protein L22p/L17e 6 102 2.2E-25 T 11-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 YH65_10585 5286f8a246ae7dbd0b963c0cf94241e4 112 Gene3D G3DSA:3.90.470.10 2 111 1.6E-32 T 11-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 YH65_10585 5286f8a246ae7dbd0b963c0cf94241e4 112 SUPERFAMILY SSF54843 3 104 1.31E-30 T 11-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 YH65_02450 3495f21168195df83e0d704d0915bb4b 466 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 8 456 3.8E-149 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 YH65_02450 3495f21168195df83e0d704d0915bb4b 466 Gene3D G3DSA:3.30.300.20 377 459 1.5E-28 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta YH65_02450 3495f21168195df83e0d704d0915bb4b 466 Pfam PF01926 50S ribosome-binding GTPase 205 321 6.5E-23 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 YH65_02450 3495f21168195df83e0d704d0915bb4b 466 Pfam PF01926 50S ribosome-binding GTPase 8 123 8.6E-24 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 YH65_02450 3495f21168195df83e0d704d0915bb4b 466 PIRSF PIRSF006485 5 465 1.7E-149 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 YH65_02450 3495f21168195df83e0d704d0915bb4b 466 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 377 457 4.6E-29 T 11-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like YH65_02450 3495f21168195df83e0d704d0915bb4b 466 Gene3D G3DSA:3.40.50.300 1 175 2.5E-36 T 11-10-2018 YH65_02450 3495f21168195df83e0d704d0915bb4b 466 Gene3D G3DSA:3.40.50.300 197 375 4.9E-46 T 11-10-2018 YH65_02450 3495f21168195df83e0d704d0915bb4b 466 Hamap MF_00195 GTPase Der [der]. 6 460 33.735 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 YH65_02450 3495f21168195df83e0d704d0915bb4b 466 SUPERFAMILY SSF52540 8 189 9.25E-38 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_02450 3495f21168195df83e0d704d0915bb4b 466 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 76 94 1.3E-5 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 YH65_02450 3495f21168195df83e0d704d0915bb4b 466 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 9 29 1.3E-5 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 YH65_02450 3495f21168195df83e0d704d0915bb4b 466 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 201 367 5.4E-27 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 YH65_02450 3495f21168195df83e0d704d0915bb4b 466 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 7 154 9.9E-25 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 YH65_02450 3495f21168195df83e0d704d0915bb4b 466 SUPERFAMILY SSF52540 199 459 1.05E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_07015 8e9206f9f1302237558f4e2acaa46aac 152 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 27 137 4.2E-8 T 11-10-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system YH65_09445 19f4cef35e6e836ef221fcca8330fd02 338 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 170 317 4.3E-38 T 11-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 YH65_09445 19f4cef35e6e836ef221fcca8330fd02 338 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 3 138 2.0E-26 T 11-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 YH65_09445 19f4cef35e6e836ef221fcca8330fd02 338 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 3 336 29.463 T 11-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 YH65_09445 19f4cef35e6e836ef221fcca8330fd02 338 Gene3D G3DSA:3.40.50.2000 154 306 8.4E-79 T 11-10-2018 YH65_09445 19f4cef35e6e836ef221fcca8330fd02 338 SUPERFAMILY SSF53756 1 333 6.28E-79 T 11-10-2018 YH65_09445 19f4cef35e6e836ef221fcca8330fd02 338 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 330 3.5E-79 T 11-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 YH65_09445 19f4cef35e6e836ef221fcca8330fd02 338 Gene3D G3DSA:3.40.50.2000 4 153 8.4E-79 T 11-10-2018 YH65_00800 24138aa04ab225a9f265fda414ad6acf 392 Pfam PF02687 FtsX-like permease family 284 385 1.3E-10 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 YH65_10090 fab273d5ce413cb763fa3bd2752b5482 325 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 131 323 8.8E-32 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 YH65_10090 fab273d5ce413cb763fa3bd2752b5482 325 Gene3D G3DSA:1.10.3720.10 106 317 5.1E-17 T 11-10-2018 IPR035906 MetI-like superfamily YH65_10090 fab273d5ce413cb763fa3bd2752b5482 325 SUPERFAMILY SSF161098 108 306 1.31E-13 T 11-10-2018 IPR035906 MetI-like superfamily YH65_01325 22596116b989f326c24e8518ca5f91e3 138 ProSitePatterns PS01314 Uncharacterized protein family UPF0047 signature. 99 117 - T 11-10-2018 IPR001602 Uncharacterised protein family UPF0047 YH65_01325 22596116b989f326c24e8518ca5f91e3 138 PIRSF PIRSF004681 1 138 2.1E-45 T 11-10-2018 IPR001602 Uncharacterised protein family UPF0047 YH65_01325 22596116b989f326c24e8518ca5f91e3 138 Gene3D G3DSA:2.60.120.460 1 138 5.4E-41 T 11-10-2018 IPR035917 YjbQ-like superfamily YH65_01325 22596116b989f326c24e8518ca5f91e3 138 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 12 138 1.1E-39 T 11-10-2018 IPR001602 Uncharacterised protein family UPF0047 YH65_01325 22596116b989f326c24e8518ca5f91e3 138 Pfam PF01894 Uncharacterised protein family UPF0047 20 134 8.9E-38 T 11-10-2018 IPR001602 Uncharacterised protein family UPF0047 YH65_01325 22596116b989f326c24e8518ca5f91e3 138 SUPERFAMILY SSF111038 2 138 5.23E-45 T 11-10-2018 IPR035917 YjbQ-like superfamily YH65_09835 ffad15b08355ab9133c03ef075556d7f 304 Gene3D G3DSA:3.30.470.10 1 128 4.7E-39 T 11-10-2018 YH65_09835 ffad15b08355ab9133c03ef075556d7f 304 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 8 304 1.4E-123 T 11-10-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 YH65_09835 ffad15b08355ab9133c03ef075556d7f 304 Pfam PF01063 Amino-transferase class IV 34 264 4.5E-44 T 11-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 YH65_09835 ffad15b08355ab9133c03ef075556d7f 304 SUPERFAMILY SSF56752 5 301 7.19E-95 T 11-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 YH65_09835 ffad15b08355ab9133c03ef075556d7f 304 Gene3D G3DSA:3.20.10.10 130 303 7.1E-50 T 11-10-2018 YH65_00875 5c182d1ccf34f3eea6f70f530eb98851 246 Pfam PF00929 Exonuclease 59 210 1.7E-26 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III YH65_00875 5c182d1ccf34f3eea6f70f530eb98851 246 Gene3D G3DSA:3.30.420.10 51 217 3.4E-39 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 YH65_00875 5c182d1ccf34f3eea6f70f530eb98851 246 SMART SM00479 56 220 1.7E-32 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III YH65_00875 5c182d1ccf34f3eea6f70f530eb98851 246 SUPERFAMILY SSF53098 50 220 6.96E-47 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily YH65_04675 1886d3db16291c56e150fe36339425ac 261 Pfam PF05036 Sporulation related domain 186 248 7.0E-9 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 YH65_04675 1886d3db16291c56e150fe36339425ac 261 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 4 159 22.004 T 11-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 YH65_04675 1886d3db16291c56e150fe36339425ac 261 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 69 173 4.3E-46 T 11-10-2018 IPR012997 Rare lipoprotein A YH65_04675 1886d3db16291c56e150fe36339425ac 261 Gene3D G3DSA:2.40.40.10 66 160 1.1E-33 T 11-10-2018 IPR036908 RlpA-like domain superfamily YH65_04675 1886d3db16291c56e150fe36339425ac 261 Pfam PF03330 Lytic transglycolase 68 156 2.4E-22 T 11-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain YH65_04675 1886d3db16291c56e150fe36339425ac 261 SUPERFAMILY SSF110997 188 248 7.45E-6 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 YH65_04675 1886d3db16291c56e150fe36339425ac 261 SUPERFAMILY SSF50685 57 159 1.01E-9 T 11-10-2018 IPR036908 RlpA-like domain superfamily YH65_06595 f2001d951cca90780ec0dfc3e4afc448 76 SUPERFAMILY SSF47598 2 41 1.33E-6 T 11-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 YH65_06595 f2001d951cca90780ec0dfc3e4afc448 76 Pfam PF01402 Ribbon-helix-helix protein, copG family 5 40 1.3E-5 T 11-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 YH65_08475 af91cf361c310fe91a2a9e944dc88254 213 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YH65_08475 af91cf361c310fe91a2a9e944dc88254 213 Gene3D G3DSA:3.40.50.300 1 213 3.2E-60 T 11-10-2018 YH65_08475 af91cf361c310fe91a2a9e944dc88254 213 SMART SM00382 26 212 5.5E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain YH65_08475 af91cf361c310fe91a2a9e944dc88254 213 SUPERFAMILY SSF52540 1 211 2.89E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_08475 af91cf361c310fe91a2a9e944dc88254 213 Pfam PF00005 ABC transporter 21 159 9.9E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YH65_01715 824c3734b476be48bf6911f977b695fa 270 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 10 270 7.3E-106 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 YH65_01715 824c3734b476be48bf6911f977b695fa 270 PIRSF PIRSF000388 3 270 5.0E-104 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 YH65_01715 824c3734b476be48bf6911f977b695fa 270 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 12 270 39.102 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 YH65_01715 824c3734b476be48bf6911f977b695fa 270 Gene3D G3DSA:3.20.20.60 1 270 2.8E-104 T 11-10-2018 YH65_01715 824c3734b476be48bf6911f977b695fa 270 Pfam PF02548 Ketopantoate hydroxymethyltransferase 11 265 2.9E-103 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 YH65_01715 824c3734b476be48bf6911f977b695fa 270 SUPERFAMILY SSF51621 11 270 6.73E-97 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 YH65_08270 ea8779636bf00bb630bc5b770e022b75 465 Gene3D G3DSA:1.10.275.10 4 137 8.2E-56 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal YH65_08270 ea8779636bf00bb630bc5b770e022b75 465 Pfam PF10415 Fumarase C C-terminus 409 461 4.4E-25 T 11-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 YH65_08270 ea8779636bf00bb630bc5b770e022b75 465 Gene3D G3DSA:1.20.200.10 138 408 4.6E-110 T 11-10-2018 YH65_08270 ea8779636bf00bb630bc5b770e022b75 465 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 3 462 5.5E-234 T 11-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 YH65_08270 ea8779636bf00bb630bc5b770e022b75 465 Gene3D G3DSA:1.10.40.30 409 464 3.1E-28 T 11-10-2018 YH65_08270 ea8779636bf00bb630bc5b770e022b75 465 PRINTS PR00149 Fumarate lyase superfamily signature 318 334 2.7E-34 T 11-10-2018 IPR000362 Fumarate lyase family YH65_08270 ea8779636bf00bb630bc5b770e022b75 465 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 2.7E-34 T 11-10-2018 IPR000362 Fumarate lyase family YH65_08270 ea8779636bf00bb630bc5b770e022b75 465 PRINTS PR00149 Fumarate lyase superfamily signature 272 299 2.7E-34 T 11-10-2018 IPR000362 Fumarate lyase family YH65_08270 ea8779636bf00bb630bc5b770e022b75 465 PRINTS PR00149 Fumarate lyase superfamily signature 179 197 2.7E-34 T 11-10-2018 IPR000362 Fumarate lyase family YH65_08270 ea8779636bf00bb630bc5b770e022b75 465 ProSitePatterns PS00163 Fumarate lyases signature. 318 327 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 YH65_08270 ea8779636bf00bb630bc5b770e022b75 465 Hamap MF_00743 Fumarate hydratase class II [fumC]. 3 463 87.105 T 11-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 YH65_08270 ea8779636bf00bb630bc5b770e022b75 465 Pfam PF00206 Lyase 11 343 4.1E-115 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal YH65_08270 ea8779636bf00bb630bc5b770e022b75 465 SUPERFAMILY SSF48557 3 460 1.88E-149 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 YH65_08270 ea8779636bf00bb630bc5b770e022b75 465 PRINTS PR00145 Argininosuccinate lyase family signature 132 154 2.0E-6 T 11-10-2018 YH65_08270 ea8779636bf00bb630bc5b770e022b75 465 PRINTS PR00145 Argininosuccinate lyase family signature 318 334 2.0E-6 T 11-10-2018 YH65_08270 ea8779636bf00bb630bc5b770e022b75 465 PRINTS PR00145 Argininosuccinate lyase family signature 174 194 2.0E-6 T 11-10-2018 YH65_01685 028e8980111c4ea9e088140b6b921ea8 282 SMART SM00382 27 205 3.8E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain YH65_01685 028e8980111c4ea9e088140b6b921ea8 282 SUPERFAMILY SSF52540 10 227 9.29E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_01685 028e8980111c4ea9e088140b6b921ea8 282 Pfam PF00005 ABC transporter 21 155 1.4E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YH65_01685 028e8980111c4ea9e088140b6b921ea8 282 ProSitePatterns PS00211 ABC transporters family signature. 128 142 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YH65_01685 028e8980111c4ea9e088140b6b921ea8 282 Gene3D G3DSA:3.40.50.300 19 236 6.8E-64 T 11-10-2018 YH65_08740 86888afb86a635dca5ca34260aa5102c 219 SUPERFAMILY SSF52172 1 184 9.68E-32 T 11-10-2018 IPR011006 CheY-like superfamily YH65_08740 86888afb86a635dca5ca34260aa5102c 219 Pfam PF00072 Response regulator receiver domain 3 113 2.5E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YH65_08740 86888afb86a635dca5ca34260aa5102c 219 Gene3D G3DSA:1.10.10.10 133 219 5.2E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YH65_08740 86888afb86a635dca5ca34260aa5102c 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 216 4.8E-16 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YH65_08740 86888afb86a635dca5ca34260aa5102c 219 SMART SM00862 148 217 3.3E-17 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YH65_08740 86888afb86a635dca5ca34260aa5102c 219 Gene3D G3DSA:3.40.50.2300 1 130 2.4E-27 T 11-10-2018 YH65_08740 86888afb86a635dca5ca34260aa5102c 219 SMART SM00448 1 113 6.3E-30 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YH65_05870 d4ee43409bf1305bcf0cc21251471a2b 305 Pfam PF01791 DeoC/LacD family aldolase 32 268 1.9E-34 T 11-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 YH65_05870 d4ee43409bf1305bcf0cc21251471a2b 305 SMART SM01133 31 269 3.7E-23 T 11-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 YH65_05870 d4ee43409bf1305bcf0cc21251471a2b 305 Gene3D G3DSA:3.20.20.70 1 305 2.4E-83 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YH65_05870 d4ee43409bf1305bcf0cc21251471a2b 305 PIRSF PIRSF038992 18 301 5.1E-55 T 11-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 YH65_05870 d4ee43409bf1305bcf0cc21251471a2b 305 SUPERFAMILY SSF51569 20 286 1.21E-56 T 11-10-2018 YH65_10005 4031b8daab4c88f270a3fc2fe0150446 301 SUPERFAMILY SSF46626 152 283 1.86E-14 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_10005 4031b8daab4c88f270a3fc2fe0150446 301 PIRSF PIRSF019225 41 154 4.6E-20 T 11-10-2018 IPR021195 Ubiquinol cytochrome c reductase, cytochrome c1 subunit, predicted YH65_10005 4031b8daab4c88f270a3fc2fe0150446 301 PIRSF PIRSF019225 190 301 1.2E-35 T 11-10-2018 IPR021195 Ubiquinol cytochrome c reductase, cytochrome c1 subunit, predicted YH65_10005 4031b8daab4c88f270a3fc2fe0150446 301 PIRSF PIRSF019225 147 191 0.11 T 11-10-2018 IPR021195 Ubiquinol cytochrome c reductase, cytochrome c1 subunit, predicted YH65_10005 4031b8daab4c88f270a3fc2fe0150446 301 PIRSF PIRSF019225 1 47 1.2E-12 T 11-10-2018 IPR021195 Ubiquinol cytochrome c reductase, cytochrome c1 subunit, predicted YH65_10005 4031b8daab4c88f270a3fc2fe0150446 301 Gene3D G3DSA:1.10.760.10 149 264 1.7E-7 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_10005 4031b8daab4c88f270a3fc2fe0150446 301 Pfam PF00034 Cytochrome c 52 143 9.6E-6 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YH65_10005 4031b8daab4c88f270a3fc2fe0150446 301 SUPERFAMILY SSF46626 44 163 2.51E-14 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_10005 4031b8daab4c88f270a3fc2fe0150446 301 Gene3D G3DSA:1.10.760.10 1 148 8.7E-13 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_08790 620106c0e48543e065a053a8f7faeeb5 116 SUPERFAMILY SSF52833 1 112 1.18E-34 T 11-10-2018 IPR036249 Thioredoxin-like superfamily YH65_08790 620106c0e48543e065a053a8f7faeeb5 116 Pfam PF03960 ArsC family 5 109 8.8E-17 T 11-10-2018 IPR006660 Arsenate reductase-like YH65_08790 620106c0e48543e065a053a8f7faeeb5 116 Gene3D G3DSA:3.40.30.10 1 113 1.8E-40 T 11-10-2018 YH65_08790 620106c0e48543e065a053a8f7faeeb5 116 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 2 111 2.1E-31 T 11-10-2018 IPR006504 Transcriptional regulator Spx/MgsR YH65_06320 5b0c387c5da693757b60fc53502f00fd 380 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 103 365 1.4E-29 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 YH65_06320 5b0c387c5da693757b60fc53502f00fd 380 Gene3D G3DSA:1.10.287.470 90 195 6.9E-52 T 11-10-2018 YH65_06320 5b0c387c5da693757b60fc53502f00fd 380 Gene3D G3DSA:2.40.50.100 56 230 6.9E-52 T 11-10-2018 YH65_06320 5b0c387c5da693757b60fc53502f00fd 380 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 51 277 3.0E-20 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YH65_06320 5b0c387c5da693757b60fc53502f00fd 380 Gene3D G3DSA:2.40.420.20 41 357 6.9E-52 T 11-10-2018 YH65_06320 5b0c387c5da693757b60fc53502f00fd 380 Gene3D G3DSA:2.40.30.170 45 306 6.9E-52 T 11-10-2018 YH65_06320 5b0c387c5da693757b60fc53502f00fd 380 SUPERFAMILY SSF111369 49 277 2.75E-13 T 11-10-2018 YH65_00820 22fb16be3619d48fb5256c09ded16dc8 75 SUPERFAMILY SSF47336 3 74 4.71E-22 T 11-10-2018 IPR036736 ACP-like superfamily YH65_00820 22fb16be3619d48fb5256c09ded16dc8 75 ProSitePatterns PS00012 Phosphopantetheine attachment site. 31 46 - T 11-10-2018 IPR006162 Phosphopantetheine attachment site YH65_00820 22fb16be3619d48fb5256c09ded16dc8 75 Pfam PF00550 Phosphopantetheine attachment site 6 72 8.7E-16 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain YH65_00820 22fb16be3619d48fb5256c09ded16dc8 75 Hamap MF_01217 Acyl carrier protein [acpP]. 2 75 20.186 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 YH65_00820 22fb16be3619d48fb5256c09ded16dc8 75 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 33 72 5.0E-10 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 YH65_00820 22fb16be3619d48fb5256c09ded16dc8 75 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 2 74 3.0E-34 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 YH65_00820 22fb16be3619d48fb5256c09ded16dc8 75 Gene3D G3DSA:1.10.1200.10 2 74 3.0E-28 T 11-10-2018 IPR036736 ACP-like superfamily YH65_04695 afc01c89d9101a7b8f380fd5454c8502 159 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 18 153 1.5E-24 T 11-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 YH65_04695 afc01c89d9101a7b8f380fd5454c8502 159 Gene3D G3DSA:2.60.450.10 17 153 1.1E-20 T 11-10-2018 YH65_04695 afc01c89d9101a7b8f380fd5454c8502 159 Pfam PF03968 OstA-like protein 22 136 6.5E-21 T 11-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal YH65_01375 a00124b0bb0f9952f56ec89809b9eb6a 160 PRINTS PR01100 Shikimate kinase family signature 19 32 1.4E-7 T 11-10-2018 YH65_01375 a00124b0bb0f9952f56ec89809b9eb6a 160 PRINTS PR01100 Shikimate kinase family signature 83 100 1.4E-7 T 11-10-2018 YH65_01375 a00124b0bb0f9952f56ec89809b9eb6a 160 PRINTS PR01100 Shikimate kinase family signature 47 55 1.4E-7 T 11-10-2018 YH65_01375 a00124b0bb0f9952f56ec89809b9eb6a 160 PRINTS PR01100 Shikimate kinase family signature 66 75 1.4E-7 T 11-10-2018 YH65_01375 a00124b0bb0f9952f56ec89809b9eb6a 160 Pfam PF01202 Shikimate kinase 1 158 3.1E-28 T 11-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 YH65_01375 a00124b0bb0f9952f56ec89809b9eb6a 160 Gene3D G3DSA:3.40.50.300 1 159 1.6E-40 T 11-10-2018 YH65_01375 a00124b0bb0f9952f56ec89809b9eb6a 160 Hamap MF_00109 Shikimate kinase [aroK]. 1 159 15.513 T 11-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 YH65_01375 a00124b0bb0f9952f56ec89809b9eb6a 160 SUPERFAMILY SSF52540 1 157 9.55E-20 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_10415 633b3b207f48396e0bfd0bcb83abb7d9 100 Gene3D G3DSA:2.60.40.10 1 100 4.0E-15 T 11-10-2018 IPR013783 Immunoglobulin-like fold YH65_10415 633b3b207f48396e0bfd0bcb83abb7d9 100 SUPERFAMILY SSF81296 1 99 6.44E-16 T 11-10-2018 IPR014756 Immunoglobulin E-set YH65_10415 633b3b207f48396e0bfd0bcb83abb7d9 100 Pfam PF08770 Sulphur oxidation protein SoxZ 6 94 2.3E-22 T 11-10-2018 IPR014880 Sulphur oxidation protein SoxZ YH65_10415 633b3b207f48396e0bfd0bcb83abb7d9 100 TIGRFAM TIGR04490 SoxZ_true: thiosulfate oxidation carrier complex protein SoxZ 5 99 1.2E-26 T 11-10-2018 IPR030995 Thiosulfate oxidation carrier complex protein SoxZ YH65_04165 dcd963e58b10b6e5947a3bd6ea5e7c59 290 Pfam PF13186 Iron-sulfur cluster-binding domain 216 281 1.1E-10 T 11-10-2018 IPR023885 4Fe4S-binding SPASM domain YH65_04165 dcd963e58b10b6e5947a3bd6ea5e7c59 290 SUPERFAMILY SSF102114 3 284 4.71E-28 T 11-10-2018 YH65_04165 dcd963e58b10b6e5947a3bd6ea5e7c59 290 Pfam PF04055 Radical SAM superfamily 8 125 2.4E-7 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 YH65_10185 7ec812deea3f580d7ba6001bb7d0209f 416 SUPERFAMILY SSF52540 3 415 1.04E-157 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_10185 7ec812deea3f580d7ba6001bb7d0209f 416 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 11-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 YH65_10185 7ec812deea3f580d7ba6001bb7d0209f 416 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 129 140 - T 11-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 YH65_10185 7ec812deea3f580d7ba6001bb7d0209f 416 Gene3D G3DSA:3.40.440.10 7 258 6.5E-96 T 11-10-2018 YH65_10185 7ec812deea3f580d7ba6001bb7d0209f 416 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 7 414 3.9E-161 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 YH65_10185 7ec812deea3f580d7ba6001bb7d0209f 416 Gene3D G3DSA:3.90.170.10 262 415 2.3E-67 T 11-10-2018 YH65_10185 7ec812deea3f580d7ba6001bb7d0209f 416 Gene3D G3DSA:1.10.300.10 98 196 6.5E-96 T 11-10-2018 YH65_10185 7ec812deea3f580d7ba6001bb7d0209f 416 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 416 181.323 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 YH65_10185 7ec812deea3f580d7ba6001bb7d0209f 416 Pfam PF00709 Adenylosuccinate synthetase 6 414 3.5E-170 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 YH65_10185 7ec812deea3f580d7ba6001bb7d0209f 416 SMART SM00788 4 415 6.4E-253 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 YH65_10400 af8eb34f22203252d0488a23ed5b594f 143 Gene3D G3DSA:2.40.33.20 1 143 1.7E-17 T 11-10-2018 YH65_10400 af8eb34f22203252d0488a23ed5b594f 143 SUPERFAMILY SSF50800 5 142 4.6E-20 T 11-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily YH65_01415 0129a794867edced584bb1a8704e5ca8 494 SUPERFAMILY SSF55874 25 92 2.21E-5 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YH65_01415 0129a794867edced584bb1a8704e5ca8 494 Gene3D G3DSA:3.30.565.10 1 131 2.1E-7 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YH65_01415 0129a794867edced584bb1a8704e5ca8 494 SUPERFAMILY SSF55729 167 297 1.5E-19 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase YH65_01415 0129a794867edced584bb1a8704e5ca8 494 Gene3D G3DSA:3.40.630.30 165 315 1.5E-14 T 11-10-2018 YH65_01415 0129a794867edced584bb1a8704e5ca8 494 Pfam PF00583 Acetyltransferase (GNAT) family 204 272 2.2E-8 T 11-10-2018 IPR000182 GNAT domain YH65_03775 9967a7d1e36daa25e7febf3c00b1eb92 286 Pfam PF13310 Virulence protein RhuM family 59 147 1.7E-26 T 11-10-2018 IPR011204 Virulence protein RhuM-like YH65_04285 5aae60cacf39b753586c1cb23e21cbfd 660 Pfam PF00072 Response regulator receiver domain 403 515 1.6E-20 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YH65_04285 5aae60cacf39b753586c1cb23e21cbfd 660 SMART SM00448 401 515 9.2E-19 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YH65_04285 5aae60cacf39b753586c1cb23e21cbfd 660 SUPERFAMILY SSF52172 399 541 1.42E-27 T 11-10-2018 IPR011006 CheY-like superfamily YH65_04285 5aae60cacf39b753586c1cb23e21cbfd 660 SUPERFAMILY SSF55874 63 228 1.78E-11 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YH65_04285 5aae60cacf39b753586c1cb23e21cbfd 660 Gene3D G3DSA:3.30.565.10 74 229 9.9E-13 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YH65_04285 5aae60cacf39b753586c1cb23e21cbfd 660 Gene3D G3DSA:3.40.50.2300 391 537 5.8E-30 T 11-10-2018 YH65_09475 5aa61a6aa2e50e63c8ebf3920a449855 353 Gene3D G3DSA:3.30.479.20 57 147 1.3E-22 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 YH65_09475 5aa61a6aa2e50e63c8ebf3920a449855 353 SUPERFAMILY SSF54713 152 219 1.83E-10 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 YH65_09475 5aa61a6aa2e50e63c8ebf3920a449855 353 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 352 1.4E-94 T 11-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 YH65_09475 5aa61a6aa2e50e63c8ebf3920a449855 353 SUPERFAMILY SSF46934 4 56 1.15E-17 T 11-10-2018 IPR009060 UBA-like superfamily GO:0005515 YH65_09475 5aa61a6aa2e50e63c8ebf3920a449855 353 Gene3D G3DSA:1.10.8.10 1 56 4.1E-24 T 11-10-2018 YH65_09475 5aa61a6aa2e50e63c8ebf3920a449855 353 SUPERFAMILY SSF54713 237 352 1.49E-27 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 YH65_09475 5aa61a6aa2e50e63c8ebf3920a449855 353 Hamap MF_00050 Elongation factor Ts [tsf]. 1 353 59.249 T 11-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 YH65_09475 5aa61a6aa2e50e63c8ebf3920a449855 353 Pfam PF00889 Elongation factor TS 71 219 3.4E-42 T 11-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 YH65_09475 5aa61a6aa2e50e63c8ebf3920a449855 353 Pfam PF00889 Elongation factor TS 237 335 1.2E-23 T 11-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 YH65_09475 5aa61a6aa2e50e63c8ebf3920a449855 353 SUPERFAMILY SSF54713 56 143 4.32E-18 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 YH65_09475 5aa61a6aa2e50e63c8ebf3920a449855 353 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 11-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 YH65_09475 5aa61a6aa2e50e63c8ebf3920a449855 353 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 11-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 YH65_02255 f82ead8ce112e06a44e842b42fc2aa9e 258 SUPERFAMILY SSF53448 1 241 8.04E-36 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YH65_02255 f82ead8ce112e06a44e842b42fc2aa9e 258 Pfam PF00535 Glycosyl transferase family 2 4 150 1.6E-19 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 YH65_02255 f82ead8ce112e06a44e842b42fc2aa9e 258 Gene3D G3DSA:3.90.550.10 1 234 1.1E-43 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YH65_02255 f82ead8ce112e06a44e842b42fc2aa9e 258 Pfam PF02709 N-terminal domain of galactosyltransferase 168 227 2.4E-17 T 11-10-2018 IPR027791 Galactosyltransferase, C-terminal Reactome: R-HSA-2022854|Reactome: R-HSA-975577 YH65_00960 e06addeaf9049eff09f604bb78a5268a 384 Gene3D G3DSA:1.20.1530.20 4 383 1.4E-45 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily YH65_00960 e06addeaf9049eff09f604bb78a5268a 384 Pfam PF00999 Sodium/hydrogen exchanger family 9 373 1.5E-41 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 YH65_06880 665039624aaf71afa95dfb331c1ad4bb 210 SUPERFAMILY SSF55469 5 207 5.23E-56 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 YH65_06880 665039624aaf71afa95dfb331c1ad4bb 210 Pfam PF00881 Nitroreductase family 11 189 8.3E-31 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 YH65_06880 665039624aaf71afa95dfb331c1ad4bb 210 Gene3D G3DSA:3.40.109.10 4 208 1.8E-58 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 YH65_03620 9f86c4c34a96e84e2b2bb8e3f37d373b 97 Pfam PF04892 VanZ like family 23 87 6.6E-13 T 11-10-2018 IPR006976 VanZ-like YH65_03615 3883bd0dddc4c28b634239bd1dcaad52 313 TIGRFAM TIGR00109 hemH: ferrochelatase 2 310 6.9E-84 T 11-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 YH65_03615 3883bd0dddc4c28b634239bd1dcaad52 313 SUPERFAMILY SSF53800 2 311 9.97E-85 T 11-10-2018 YH65_03615 3883bd0dddc4c28b634239bd1dcaad52 313 Hamap MF_00323 Ferrochelatase [hemH]. 1 312 32.076 T 11-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 YH65_03615 3883bd0dddc4c28b634239bd1dcaad52 313 ProSitePatterns PS00534 Ferrochelatase signature. 181 199 - T 11-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 YH65_03615 3883bd0dddc4c28b634239bd1dcaad52 313 Gene3D G3DSA:3.40.50.1400 154 293 1.1E-83 T 11-10-2018 YH65_03615 3883bd0dddc4c28b634239bd1dcaad52 313 Gene3D G3DSA:3.40.50.1400 3 309 1.1E-83 T 11-10-2018 YH65_03615 3883bd0dddc4c28b634239bd1dcaad52 313 Pfam PF00762 Ferrochelatase 2 309 9.0E-96 T 11-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 YH65_04770 17a448359bf86dd8dad4ad2d664ce7af 288 SUPERFAMILY SSF53807 18 286 1.52E-79 T 11-10-2018 YH65_04770 17a448359bf86dd8dad4ad2d664ce7af 288 PRINTS PR00691 Adhesin B signature 129 148 8.8E-6 T 11-10-2018 IPR006129 Adhesin B GO:0007155 YH65_04770 17a448359bf86dd8dad4ad2d664ce7af 288 PRINTS PR00691 Adhesin B signature 233 250 8.8E-6 T 11-10-2018 IPR006129 Adhesin B GO:0007155 YH65_04770 17a448359bf86dd8dad4ad2d664ce7af 288 PRINTS PR00691 Adhesin B signature 43 61 8.8E-6 T 11-10-2018 IPR006129 Adhesin B GO:0007155 YH65_04770 17a448359bf86dd8dad4ad2d664ce7af 288 PRINTS PR00691 Adhesin B signature 18 39 8.8E-6 T 11-10-2018 IPR006129 Adhesin B GO:0007155 YH65_04770 17a448359bf86dd8dad4ad2d664ce7af 288 Pfam PF01297 Zinc-uptake complex component A periplasmic 21 269 1.1E-64 T 11-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 YH65_04770 17a448359bf86dd8dad4ad2d664ce7af 288 Gene3D G3DSA:3.40.50.1980 17 185 1.2E-52 T 11-10-2018 YH65_04770 17a448359bf86dd8dad4ad2d664ce7af 288 Gene3D G3DSA:3.40.50.1980 189 288 5.8E-34 T 11-10-2018 YH65_04770 17a448359bf86dd8dad4ad2d664ce7af 288 PRINTS PR00690 Adhesin family signature 49 62 4.3E-5 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 YH65_04770 17a448359bf86dd8dad4ad2d664ce7af 288 PRINTS PR00690 Adhesin family signature 62 79 4.3E-5 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 YH65_04770 17a448359bf86dd8dad4ad2d664ce7af 288 PRINTS PR00690 Adhesin family signature 237 255 4.3E-5 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 YH65_05295 8095e22e401566000b49f7b3e3584aec 194 SUPERFAMILY SSF81901 5 184 1.4E-44 T 11-10-2018 YH65_05295 8095e22e401566000b49f7b3e3584aec 194 SMART SM00671 105 140 4.3E-7 T 11-10-2018 IPR006597 Sel1-like repeat YH65_05295 8095e22e401566000b49f7b3e3584aec 194 SMART SM00671 141 176 2.9E-8 T 11-10-2018 IPR006597 Sel1-like repeat YH65_05295 8095e22e401566000b49f7b3e3584aec 194 SMART SM00671 69 104 2.9E-8 T 11-10-2018 IPR006597 Sel1-like repeat YH65_05295 8095e22e401566000b49f7b3e3584aec 194 SMART SM00671 33 68 2.6E-4 T 11-10-2018 IPR006597 Sel1-like repeat YH65_05295 8095e22e401566000b49f7b3e3584aec 194 Gene3D G3DSA:1.25.40.10 1 193 5.8E-52 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YH65_05295 8095e22e401566000b49f7b3e3584aec 194 Pfam PF08238 Sel1 repeat 70 104 9.8E-7 T 11-10-2018 IPR006597 Sel1-like repeat YH65_05295 8095e22e401566000b49f7b3e3584aec 194 Pfam PF08238 Sel1 repeat 141 176 5.7E-8 T 11-10-2018 IPR006597 Sel1-like repeat YH65_05295 8095e22e401566000b49f7b3e3584aec 194 Pfam PF08238 Sel1 repeat 110 140 8.5E-6 T 11-10-2018 IPR006597 Sel1-like repeat YH65_05295 8095e22e401566000b49f7b3e3584aec 194 Pfam PF08238 Sel1 repeat 37 65 0.002 T 11-10-2018 IPR006597 Sel1-like repeat YH65_02765 44a955e30baa91ba93050b1ae0bfaac2 399 SUPERFAMILY SSF55874 259 397 3.27E-30 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YH65_02765 44a955e30baa91ba93050b1ae0bfaac2 399 SMART SM00388 196 254 1.1E-5 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YH65_02765 44a955e30baa91ba93050b1ae0bfaac2 399 Gene3D G3DSA:1.10.287.130 145 249 2.3E-8 T 11-10-2018 YH65_02765 44a955e30baa91ba93050b1ae0bfaac2 399 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 300 397 6.8E-20 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YH65_02765 44a955e30baa91ba93050b1ae0bfaac2 399 SMART SM00387 296 399 4.0E-26 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YH65_02765 44a955e30baa91ba93050b1ae0bfaac2 399 SUPERFAMILY SSF47384 187 243 7.26E-8 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 YH65_02765 44a955e30baa91ba93050b1ae0bfaac2 399 Gene3D G3DSA:3.30.565.10 253 398 3.0E-32 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YH65_02765 44a955e30baa91ba93050b1ae0bfaac2 399 Pfam PF00512 His Kinase A (phospho-acceptor) domain 196 273 2.9E-9 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YH65_02765 44a955e30baa91ba93050b1ae0bfaac2 399 PRINTS PR00344 Bacterial sensor protein C-terminal signature 329 343 7.8E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YH65_02765 44a955e30baa91ba93050b1ae0bfaac2 399 PRINTS PR00344 Bacterial sensor protein C-terminal signature 384 397 7.8E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YH65_02765 44a955e30baa91ba93050b1ae0bfaac2 399 PRINTS PR00344 Bacterial sensor protein C-terminal signature 347 357 7.8E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YH65_02765 44a955e30baa91ba93050b1ae0bfaac2 399 PRINTS PR00344 Bacterial sensor protein C-terminal signature 360 378 7.8E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YH65_08080 e74e5241e1b83912df2d9d5275e458f9 226 Pfam PF01553 Acyltransferase 51 179 4.9E-23 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 YH65_08080 e74e5241e1b83912df2d9d5275e458f9 226 SUPERFAMILY SSF69593 35 215 1.24E-34 T 11-10-2018 YH65_08080 e74e5241e1b83912df2d9d5275e458f9 226 SMART SM00563 65 182 1.1E-23 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 YH65_06525 8550f37cb432c4025b07868fb96923e0 234 SUPERFAMILY SSF56300 9 198 8.42E-16 T 11-10-2018 YH65_06520 b06a557f7b4663ee9562b2223a7b9fe8 125 PRINTS PR00421 Thioredoxin family signature 29 38 3.6E-7 T 11-10-2018 YH65_06520 b06a557f7b4663ee9562b2223a7b9fe8 125 PRINTS PR00421 Thioredoxin family signature 21 29 3.6E-7 T 11-10-2018 YH65_06520 b06a557f7b4663ee9562b2223a7b9fe8 125 PRINTS PR00421 Thioredoxin family signature 68 79 3.6E-7 T 11-10-2018 YH65_06520 b06a557f7b4663ee9562b2223a7b9fe8 125 PIRSF PIRSF000077 1 104 1.9E-28 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 YH65_06520 b06a557f7b4663ee9562b2223a7b9fe8 125 SUPERFAMILY SSF52833 4 103 2.0E-34 T 11-10-2018 IPR036249 Thioredoxin-like superfamily YH65_06520 b06a557f7b4663ee9562b2223a7b9fe8 125 Gene3D G3DSA:3.40.30.10 1 119 1.1E-31 T 11-10-2018 YH65_06520 b06a557f7b4663ee9562b2223a7b9fe8 125 TIGRFAM TIGR01068 thioredoxin: thioredoxin 7 102 4.7E-31 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 YH65_06520 b06a557f7b4663ee9562b2223a7b9fe8 125 ProSitePatterns PS00194 Thioredoxin family active site. 22 40 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 YH65_06520 b06a557f7b4663ee9562b2223a7b9fe8 125 Pfam PF00085 Thioredoxin 4 101 1.2E-26 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 YH65_03440 84c755d06ff480fcccfe4d627bbc700d 355 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 240 259 - T 11-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 YH65_03440 84c755d06ff480fcccfe4d627bbc700d 355 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 349 8.1E-134 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 YH65_03440 84c755d06ff480fcccfe4d627bbc700d 355 SMART SM01329 5 349 1.5E-198 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 YH65_03440 84c755d06ff480fcccfe4d627bbc700d 355 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 5 346 7.9E-156 T 11-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 YH65_03440 84c755d06ff480fcccfe4d627bbc700d 355 Gene3D G3DSA:3.40.718.10 2 354 1.0E-145 T 11-10-2018 YH65_03440 84c755d06ff480fcccfe4d627bbc700d 355 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 4 353 50.28 T 11-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 YH65_03440 84c755d06ff480fcccfe4d627bbc700d 355 SUPERFAMILY SSF53659 4 351 1.57E-124 T 11-10-2018 YH65_00445 94fb194d5bfb01f5177769b14119c55a 172 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 42 150 3.8E-22 T 11-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_00445 94fb194d5bfb01f5177769b14119c55a 172 SUPERFAMILY SSF56770 16 160 8.77E-64 T 11-10-2018 YH65_00445 94fb194d5bfb01f5177769b14119c55a 172 Gene3D G3DSA:3.40.50.12280 2 171 1.7E-72 T 11-10-2018 YH65_00445 94fb194d5bfb01f5177769b14119c55a 172 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 16 157 7.5E-72 T 11-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_00445 94fb194d5bfb01f5177769b14119c55a 172 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 12 155 41.415 T 11-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_06465 9bc4badbcf7290f6ca2edba199a1863b 368 SUPERFAMILY SSF53098 124 296 4.74E-17 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily YH65_06465 9bc4badbcf7290f6ca2edba199a1863b 368 Gene3D G3DSA:3.30.420.10 120 336 7.3E-11 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 YH65_06465 9bc4badbcf7290f6ca2edba199a1863b 368 Pfam PF00665 Integrase core domain 123 245 9.4E-26 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 YH65_06465 9bc4badbcf7290f6ca2edba199a1863b 368 Gene3D G3DSA:1.10.10.60 3 44 4.9E-5 T 11-10-2018 YH65_00385 241b3f2938b9450ee2c0b867514db645 417 Pfam PF00326 Prolyl oligopeptidase family 141 214 1.1E-5 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 YH65_00385 241b3f2938b9450ee2c0b867514db645 417 Gene3D G3DSA:3.40.50.1820 65 364 3.9E-74 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold YH65_00385 241b3f2938b9450ee2c0b867514db645 417 Gene3D G3DSA:1.10.260.160 240 334 3.9E-74 T 11-10-2018 YH65_00385 241b3f2938b9450ee2c0b867514db645 417 PIRSF PIRSF029171 1 383 3.9E-69 T 11-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 YH65_00385 241b3f2938b9450ee2c0b867514db645 417 SUPERFAMILY SSF53474 139 380 4.25E-17 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold YH65_08385 726688f4b40d1b6b626a3f03b01592ad 427 Gene3D G3DSA:3.65.10.10 242 419 1.8E-158 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 YH65_08385 726688f4b40d1b6b626a3f03b01592ad 427 SUPERFAMILY SSF55205 1 424 7.33E-142 T 11-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 YH65_08385 726688f4b40d1b6b626a3f03b01592ad 427 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 420 1.1E-154 T 11-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 YH65_08385 726688f4b40d1b6b626a3f03b01592ad 427 ProSitePatterns PS00885 EPSP synthase signature 2. 339 357 - T 11-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 YH65_08385 726688f4b40d1b6b626a3f03b01592ad 427 PIRSF PIRSF000505 1 426 4.2E-156 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 YH65_08385 726688f4b40d1b6b626a3f03b01592ad 427 Gene3D G3DSA:3.65.10.10 20 224 1.8E-158 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 YH65_08385 726688f4b40d1b6b626a3f03b01592ad 427 ProSitePatterns PS00104 EPSP synthase signature 1. 90 104 - T 11-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 YH65_08385 726688f4b40d1b6b626a3f03b01592ad 427 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 424 5.4E-146 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 YH65_08385 726688f4b40d1b6b626a3f03b01592ad 427 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 427 36.352 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 YH65_05855 910ba3468838d100e4813a4056548ccf 442 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 3.7E-17 T 11-10-2018 YH65_05855 910ba3468838d100e4813a4056548ccf 442 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 126 144 3.7E-17 T 11-10-2018 YH65_05855 910ba3468838d100e4813a4056548ccf 442 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 249 265 3.7E-17 T 11-10-2018 YH65_05855 910ba3468838d100e4813a4056548ccf 442 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 275 297 3.7E-17 T 11-10-2018 YH65_05855 910ba3468838d100e4813a4056548ccf 442 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 165 183 3.7E-17 T 11-10-2018 YH65_05855 910ba3468838d100e4813a4056548ccf 442 SUPERFAMILY SSF51905 4 320 1.22E-36 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_05855 910ba3468838d100e4813a4056548ccf 442 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 290 297 7.9E-34 T 11-10-2018 YH65_05855 910ba3468838d100e4813a4056548ccf 442 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 391 406 7.9E-34 T 11-10-2018 YH65_05855 910ba3468838d100e4813a4056548ccf 442 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 7.9E-34 T 11-10-2018 YH65_05855 910ba3468838d100e4813a4056548ccf 442 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 250 264 7.9E-34 T 11-10-2018 YH65_05855 910ba3468838d100e4813a4056548ccf 442 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 165 190 7.9E-34 T 11-10-2018 YH65_05855 910ba3468838d100e4813a4056548ccf 442 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 413 433 7.9E-34 T 11-10-2018 YH65_05855 910ba3468838d100e4813a4056548ccf 442 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 7.9E-34 T 11-10-2018 YH65_05855 910ba3468838d100e4813a4056548ccf 442 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 129 138 7.9E-34 T 11-10-2018 YH65_05855 910ba3468838d100e4813a4056548ccf 442 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 308 8.2E-47 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YH65_05855 910ba3468838d100e4813a4056548ccf 442 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 333 437 5.1E-11 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 YH65_05855 910ba3468838d100e4813a4056548ccf 442 SUPERFAMILY SSF55424 340 437 4.64E-15 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 YH65_05855 910ba3468838d100e4813a4056548ccf 442 Gene3D G3DSA:3.50.50.60 138 256 4.2E-78 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_05855 910ba3468838d100e4813a4056548ccf 442 Gene3D G3DSA:3.30.390.30 323 442 3.4E-16 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 YH65_05855 910ba3468838d100e4813a4056548ccf 442 Gene3D G3DSA:3.50.50.60 5 309 4.2E-78 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_05855 910ba3468838d100e4813a4056548ccf 442 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 40 50 - T 11-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 YH65_05855 910ba3468838d100e4813a4056548ccf 442 PIRSF PIRSF000350 2 438 6.0E-53 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 YH65_09690 8fce97c63d9df2329eaac6f5a8c8803f 111 SUPERFAMILY SSF46626 1 102 6.95E-21 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_09690 8fce97c63d9df2329eaac6f5a8c8803f 111 Pfam PF00034 Cytochrome c 19 99 1.6E-10 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YH65_09690 8fce97c63d9df2329eaac6f5a8c8803f 111 Gene3D G3DSA:1.10.760.10 13 100 1.6E-17 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_05605 ee1d8111fef6005946ba216b06a9e0a8 532 Gene3D G3DSA:3.40.720.10 211 532 1.2E-83 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 YH65_05605 ee1d8111fef6005946ba216b06a9e0a8 532 SUPERFAMILY SSF53649 230 488 5.63E-21 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 YH65_05605 ee1d8111fef6005946ba216b06a9e0a8 532 Pfam PF00884 Sulfatase 230 516 2.6E-43 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 YH65_05605 ee1d8111fef6005946ba216b06a9e0a8 532 Pfam PF08019 Domain of unknown function (DUF1705) 51 199 5.3E-49 T 11-10-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 YH65_01050 662b696485af8bdf4dc93a2952c00442 430 Pfam PF13635 Domain of unknown function (DUF4143) 239 365 1.3E-10 T 11-10-2018 IPR025420 Domain of unknown function DUF4143 YH65_01050 662b696485af8bdf4dc93a2952c00442 430 Pfam PF13173 AAA domain 34 167 3.1E-37 T 11-10-2018 YH65_01050 662b696485af8bdf4dc93a2952c00442 430 SUPERFAMILY SSF52540 4 200 3.86E-19 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_00995 274d45525e1ced2fff7e9e3522afa653 452 Pfam PF13749 Putative ATP-dependent DNA helicase recG C-terminal 287 369 2.5E-24 T 11-10-2018 IPR025831 ATP-dependent DNA helicase RecG, C-terminal domain YH65_00995 274d45525e1ced2fff7e9e3522afa653 452 Gene3D G3DSA:3.30.950.30 1 129 4.8E-27 T 11-10-2018 IPR038461 Schlafen, AAA domain superfamily YH65_00995 274d45525e1ced2fff7e9e3522afa653 452 Gene3D G3DSA:3.30.565.60 214 375 5.3E-43 T 11-10-2018 IPR038475 RecG, C-terminal domain superfamily YH65_00995 274d45525e1ced2fff7e9e3522afa653 452 Pfam PF04326 Putative DNA-binding domain 12 120 3.5E-21 T 11-10-2018 IPR007421 Schlafen, AAA domain GO:0005524 YH65_02175 6ff587abdcd1eaa0db38e3a65d396500 543 Gene3D G3DSA:3.50.7.10 191 371 1.4E-230 T 11-10-2018 IPR027409 GroEL-like apical domain superfamily YH65_02175 6ff587abdcd1eaa0db38e3a65d396500 543 Hamap MF_00600 60 kDa chaperonin [groL]. 1 542 40.894 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 YH65_02175 6ff587abdcd1eaa0db38e3a65d396500 543 PRINTS PR00298 60kDa chaperonin signature 349 374 9.2E-71 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 YH65_02175 6ff587abdcd1eaa0db38e3a65d396500 543 PRINTS PR00298 60kDa chaperonin signature 26 52 9.2E-71 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 YH65_02175 6ff587abdcd1eaa0db38e3a65d396500 543 PRINTS PR00298 60kDa chaperonin signature 267 290 9.2E-71 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 YH65_02175 6ff587abdcd1eaa0db38e3a65d396500 543 PRINTS PR00298 60kDa chaperonin signature 82 109 9.2E-71 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 YH65_02175 6ff587abdcd1eaa0db38e3a65d396500 543 PRINTS PR00298 60kDa chaperonin signature 397 418 9.2E-71 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 YH65_02175 6ff587abdcd1eaa0db38e3a65d396500 543 SUPERFAMILY SSF54849 136 204 2.11E-26 T 11-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily YH65_02175 6ff587abdcd1eaa0db38e3a65d396500 543 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 522 2.9E-97 T 11-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 YH65_02175 6ff587abdcd1eaa0db38e3a65d396500 543 Gene3D G3DSA:3.30.260.10 135 409 1.4E-230 T 11-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily YH65_02175 6ff587abdcd1eaa0db38e3a65d396500 543 SUPERFAMILY SSF48592 6 519 1.91E-74 T 11-10-2018 IPR027413 GroEL-like equatorial domain superfamily YH65_02175 6ff587abdcd1eaa0db38e3a65d396500 543 ProSitePatterns PS00296 Chaperonins cpn60 signature. 404 415 - T 11-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 YH65_02175 6ff587abdcd1eaa0db38e3a65d396500 543 Gene3D G3DSA:1.10.560.10 7 519 1.4E-230 T 11-10-2018 IPR027413 GroEL-like equatorial domain superfamily YH65_02175 6ff587abdcd1eaa0db38e3a65d396500 543 SUPERFAMILY SSF52029 184 375 4.49E-82 T 11-10-2018 IPR027409 GroEL-like apical domain superfamily YH65_02175 6ff587abdcd1eaa0db38e3a65d396500 543 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 525 8.2E-253 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 YH65_10205 123a689c19f4f45c2718e32f792c0c36 767 SUPERFAMILY SSF52540 526 757 4.56E-20 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_10205 123a689c19f4f45c2718e32f792c0c36 767 Gene3D G3DSA:3.40.50.300 520 760 1.2E-14 T 11-10-2018 YH65_10205 123a689c19f4f45c2718e32f792c0c36 767 Pfam PF00685 Sulfotransferase domain 529 647 6.8E-7 T 11-10-2018 IPR000863 Sulfotransferase domain GO:0008146 YH65_07740 3cc5f2d8da776b94b47c661f3b1c19ff 217 Pfam PF00072 Response regulator receiver domain 3 111 4.2E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YH65_07740 3cc5f2d8da776b94b47c661f3b1c19ff 217 Gene3D G3DSA:1.10.10.10 123 217 1.6E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YH65_07740 3cc5f2d8da776b94b47c661f3b1c19ff 217 Gene3D G3DSA:3.40.50.2300 1 121 7.3E-29 T 11-10-2018 YH65_07740 3cc5f2d8da776b94b47c661f3b1c19ff 217 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 215 1.4E-17 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YH65_07740 3cc5f2d8da776b94b47c661f3b1c19ff 217 SMART SM00448 1 111 1.5E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YH65_07740 3cc5f2d8da776b94b47c661f3b1c19ff 217 SMART SM00862 145 216 2.1E-16 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YH65_07740 3cc5f2d8da776b94b47c661f3b1c19ff 217 SUPERFAMILY SSF52172 1 166 3.27E-30 T 11-10-2018 IPR011006 CheY-like superfamily YH65_06745 225468a44d69c6e7bb31687ea5828ad2 204 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 3 203 1.2E-47 T 11-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 YH65_06745 225468a44d69c6e7bb31687ea5828ad2 204 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 4 202 2.6E-50 T 11-10-2018 YH65_06745 225468a44d69c6e7bb31687ea5828ad2 204 Gene3D G3DSA:3.40.50.150 1 204 1.7E-65 T 11-10-2018 YH65_06745 225468a44d69c6e7bb31687ea5828ad2 204 SUPERFAMILY SSF53335 3 196 2.01E-37 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YH65_09970 14078e5c9322f8bee5690d6e3d228af9 235 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 189 219 6.1E-12 T 11-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 YH65_09970 14078e5c9322f8bee5690d6e3d228af9 235 SUPERFAMILY SSF52833 39 213 1.68E-56 T 11-10-2018 IPR036249 Thioredoxin-like superfamily YH65_09970 14078e5c9322f8bee5690d6e3d228af9 235 PIRSF PIRSF000239 30 235 1.9E-49 T 11-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 YH65_09970 14078e5c9322f8bee5690d6e3d228af9 235 Pfam PF00578 AhpC/TSA family 39 168 2.6E-35 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 YH65_09970 14078e5c9322f8bee5690d6e3d228af9 235 Gene3D G3DSA:3.40.30.10 29 223 3.4E-61 T 11-10-2018 YH65_09350 d36525b7eb5defc240af743f3f1c2d36 100 Pfam PF13488 Glycine zipper 33 75 3.3E-9 T 11-10-2018 IPR039567 Glycine zipper domain YH65_02445 0596b771f67a46d0cf7029b313c714d7 319 Gene3D G3DSA:1.10.240.10 184 287 2.0E-111 T 11-10-2018 YH65_02445 0596b771f67a46d0cf7029b313c714d7 319 SUPERFAMILY SSF52374 2 319 5.63E-84 T 11-10-2018 YH65_02445 0596b771f67a46d0cf7029b313c714d7 319 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 138 159 4.1E-25 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 YH65_02445 0596b771f67a46d0cf7029b313c714d7 319 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 63 82 4.1E-25 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 YH65_02445 0596b771f67a46d0cf7029b313c714d7 319 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 189 199 4.1E-25 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 YH65_02445 0596b771f67a46d0cf7029b313c714d7 319 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 13 29 4.1E-25 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 YH65_02445 0596b771f67a46d0cf7029b313c714d7 319 Pfam PF00579 tRNA synthetases class I (W and Y) 1 270 2.6E-64 T 11-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 YH65_02445 0596b771f67a46d0cf7029b313c714d7 319 Gene3D G3DSA:3.40.50.620 2 319 2.0E-111 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YH65_02445 0596b771f67a46d0cf7029b313c714d7 319 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 2 319 3.6E-90 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 YH65_02675 09add3b0024ae2f3d0868d273e27054e 101 Gene3D G3DSA:1.20.20.10 22 100 4.6E-23 T 11-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YH65_02675 09add3b0024ae2f3d0868d273e27054e 101 Pfam PF00137 ATP synthase subunit C 31 92 1.4E-13 T 11-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 YH65_02675 09add3b0024ae2f3d0868d273e27054e 101 ProSitePatterns PS00605 ATP synthase c subunit signature. 59 80 - T 11-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YH65_02675 09add3b0024ae2f3d0868d273e27054e 101 PRINTS PR00124 ATP synthase C subunit signature 69 94 2.2E-14 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YH65_02675 09add3b0024ae2f3d0868d273e27054e 101 PRINTS PR00124 ATP synthase C subunit signature 52 67 2.2E-14 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YH65_02675 09add3b0024ae2f3d0868d273e27054e 101 PRINTS PR00124 ATP synthase C subunit signature 31 50 2.2E-14 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YH65_02675 09add3b0024ae2f3d0868d273e27054e 101 SUPERFAMILY SSF81333 22 98 6.02E-18 T 11-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily YH65_02675 09add3b0024ae2f3d0868d273e27054e 101 Hamap MF_01396 ATP synthase subunit c [atpH]. 29 94 15.106 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YH65_02675 09add3b0024ae2f3d0868d273e27054e 101 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 39 96 7.9E-14 T 11-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 YH65_00325 a2d1816e6aee5beb18a11d5c72df3710 154 Gene3D G3DSA:3.30.420.10 2 152 6.9E-49 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 YH65_00325 a2d1816e6aee5beb18a11d5c72df3710 154 Hamap MF_00042 Ribonuclease H [rnhA]. 6 149 27.36 T 11-10-2018 IPR022892 Ribonuclease HI GO:0004523 YH65_00325 a2d1816e6aee5beb18a11d5c72df3710 154 Pfam PF00075 RNase H 7 140 1.7E-39 T 11-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 YH65_00325 a2d1816e6aee5beb18a11d5c72df3710 154 SUPERFAMILY SSF53098 7 141 1.77E-46 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily YH65_07055 169b426239bdea117a3f8bf695851853 531 SUPERFAMILY SSF51735 215 509 1.5E-56 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily YH65_07055 169b426239bdea117a3f8bf695851853 531 Gene3D G3DSA:3.40.50.720 74 198 5.7E-25 T 11-10-2018 YH65_07055 169b426239bdea117a3f8bf695851853 531 Pfam PF13727 CoA-binding domain 21 172 1.0E-6 T 11-10-2018 YH65_07055 169b426239bdea117a3f8bf695851853 531 Gene3D G3DSA:3.90.25.30 377 474 1.1E-112 T 11-10-2018 YH65_07055 169b426239bdea117a3f8bf695851853 531 SUPERFAMILY SSF53335 53 293 5.81E-17 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YH65_07055 169b426239bdea117a3f8bf695851853 531 Pfam PF02719 Polysaccharide biosynthesis protein 217 492 7.9E-116 T 11-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain YH65_07055 169b426239bdea117a3f8bf695851853 531 Gene3D G3DSA:3.40.50.720 214 500 1.1E-112 T 11-10-2018 YH65_07320 296cd40718ebb82791ff382fa3b07f32 350 Pfam PF02277 Phosphoribosyltransferase 128 256 1.5E-6 T 11-10-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 YH65_07320 296cd40718ebb82791ff382fa3b07f32 350 TIGRFAM TIGR00303 TIGR00303: TIGR00303 family protein 16 346 2.5E-79 T 11-10-2018 IPR002805 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, putative YH65_07320 296cd40718ebb82791ff382fa3b07f32 350 SUPERFAMILY SSF52733 47 346 5.62E-38 T 11-10-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 YH65_07320 296cd40718ebb82791ff382fa3b07f32 350 Hamap MF_01086 UPF0284 protein . 1 350 94.124 T 11-10-2018 IPR002805 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, putative YH65_07320 296cd40718ebb82791ff382fa3b07f32 350 Gene3D G3DSA:3.40.50.10210 14 349 2.2E-98 T 11-10-2018 YH65_05615 8f561e366d7381f49cd7ba4fc0459aae 202 SUPERFAMILY SSF53335 6 202 1.1E-35 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YH65_05615 8f561e366d7381f49cd7ba4fc0459aae 202 Pfam PF13489 Methyltransferase domain 38 178 5.2E-16 T 11-10-2018 YH65_05615 8f561e366d7381f49cd7ba4fc0459aae 202 Gene3D G3DSA:3.40.50.150 30 195 1.1E-29 T 11-10-2018 YH65_08675 80ba6d511bae2353a5af3ab0a1d9bfdc 322 Gene3D G3DSA:3.30.310.70 197 320 8.6E-7 T 11-10-2018 IPR035923 TT1751-like domain superfamily YH65_08675 80ba6d511bae2353a5af3ab0a1d9bfdc 322 Gene3D G3DSA:3.30.310.70 45 168 5.3E-7 T 11-10-2018 IPR035923 TT1751-like domain superfamily YH65_08675 80ba6d511bae2353a5af3ab0a1d9bfdc 322 SUPERFAMILY SSF103247 52 166 7.19E-13 T 11-10-2018 IPR035923 TT1751-like domain superfamily YH65_08675 80ba6d511bae2353a5af3ab0a1d9bfdc 322 SUPERFAMILY SSF103247 203 320 1.06E-17 T 11-10-2018 IPR035923 TT1751-like domain superfamily YH65_08615 80ba6d511bae2353a5af3ab0a1d9bfdc 322 Gene3D G3DSA:3.30.310.70 197 320 8.6E-7 T 11-10-2018 IPR035923 TT1751-like domain superfamily YH65_08615 80ba6d511bae2353a5af3ab0a1d9bfdc 322 Gene3D G3DSA:3.30.310.70 45 168 5.3E-7 T 11-10-2018 IPR035923 TT1751-like domain superfamily YH65_08615 80ba6d511bae2353a5af3ab0a1d9bfdc 322 SUPERFAMILY SSF103247 52 166 7.19E-13 T 11-10-2018 IPR035923 TT1751-like domain superfamily YH65_08615 80ba6d511bae2353a5af3ab0a1d9bfdc 322 SUPERFAMILY SSF103247 203 320 1.06E-17 T 11-10-2018 IPR035923 TT1751-like domain superfamily YH65_08645 80ba6d511bae2353a5af3ab0a1d9bfdc 322 Gene3D G3DSA:3.30.310.70 197 320 8.6E-7 T 11-10-2018 IPR035923 TT1751-like domain superfamily YH65_08645 80ba6d511bae2353a5af3ab0a1d9bfdc 322 Gene3D G3DSA:3.30.310.70 45 168 5.3E-7 T 11-10-2018 IPR035923 TT1751-like domain superfamily YH65_08645 80ba6d511bae2353a5af3ab0a1d9bfdc 322 SUPERFAMILY SSF103247 52 166 7.19E-13 T 11-10-2018 IPR035923 TT1751-like domain superfamily YH65_08645 80ba6d511bae2353a5af3ab0a1d9bfdc 322 SUPERFAMILY SSF103247 203 320 1.06E-17 T 11-10-2018 IPR035923 TT1751-like domain superfamily YH65_06455 73cd34de4e4d5b050ab6b9cdcfc1a320 364 Pfam PF13701 Transposase DDE domain group 1 20 358 5.1E-39 T 11-10-2018 IPR025668 Transposase DDE domain YH65_06455 73cd34de4e4d5b050ab6b9cdcfc1a320 364 SUPERFAMILY SSF53098 110 341 1.52E-6 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily YH65_01345 b248d7ce4b6fd10a1abbb3e6a0dcf769 408 TIGRFAM TIGR03804 para_beta_helix: parallel beta-helix repeat 171 209 1.3E-6 T 11-10-2018 IPR022441 Parallel beta-helix repeat-2 Reactome: R-HSA-8951664|Reactome: R-HSA-983168 YH65_01345 b248d7ce4b6fd10a1abbb3e6a0dcf769 408 Pfam PF05048 Periplasmic copper-binding protein (NosD) 131 358 1.7E-36 T 11-10-2018 IPR007742 Periplasmic copper-binding protein NosD, beta helix domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 YH65_01345 b248d7ce4b6fd10a1abbb3e6a0dcf769 408 TIGRFAM TIGR04247 NosD_copper_fam: nitrous oxide reductase family maturation protein NosD 19 399 5.4E-107 T 11-10-2018 IPR026464 Nitrous oxide reductase family maturation protein NosD YH65_01345 b248d7ce4b6fd10a1abbb3e6a0dcf769 408 SUPERFAMILY SSF51126 14 388 2.36E-49 T 11-10-2018 IPR011050 Pectin lyase fold/virulence factor YH65_01345 b248d7ce4b6fd10a1abbb3e6a0dcf769 408 Gene3D G3DSA:2.160.20.10 17 346 3.1E-27 T 11-10-2018 IPR012334 Pectin lyase fold YH65_01345 b248d7ce4b6fd10a1abbb3e6a0dcf769 408 SMART SM00710 124 145 4000.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat YH65_01345 b248d7ce4b6fd10a1abbb3e6a0dcf769 408 SMART SM00710 102 123 1300.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat YH65_01345 b248d7ce4b6fd10a1abbb3e6a0dcf769 408 SMART SM00710 196 217 5.4 T 11-10-2018 IPR006626 Parallel beta-helix repeat YH65_01345 b248d7ce4b6fd10a1abbb3e6a0dcf769 408 SMART SM00710 244 265 2600.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat YH65_01345 b248d7ce4b6fd10a1abbb3e6a0dcf769 408 SMART SM00710 153 173 870.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat YH65_01345 b248d7ce4b6fd10a1abbb3e6a0dcf769 408 SMART SM00710 174 195 740.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat YH65_01345 b248d7ce4b6fd10a1abbb3e6a0dcf769 408 SMART SM00710 73 101 2000.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat YH65_01345 b248d7ce4b6fd10a1abbb3e6a0dcf769 408 SMART SM00710 218 241 2000.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat YH65_02195 5cd9995494df385694f9a5e649d94481 414 Gene3D G3DSA:1.10.287.40 1 105 1.1E-14 T 11-10-2018 YH65_02195 5cd9995494df385694f9a5e649d94481 414 PRINTS PR00981 Seryl-tRNA synthetase signature 332 348 1.1E-30 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 YH65_02195 5cd9995494df385694f9a5e649d94481 414 PRINTS PR00981 Seryl-tRNA synthetase signature 350 366 1.1E-30 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 YH65_02195 5cd9995494df385694f9a5e649d94481 414 PRINTS PR00981 Seryl-tRNA synthetase signature 315 328 1.1E-30 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 YH65_02195 5cd9995494df385694f9a5e649d94481 414 PRINTS PR00981 Seryl-tRNA synthetase signature 263 275 1.1E-30 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 YH65_02195 5cd9995494df385694f9a5e649d94481 414 PRINTS PR00981 Seryl-tRNA synthetase signature 275 288 1.1E-30 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 YH65_02195 5cd9995494df385694f9a5e649d94481 414 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 108 3.2E-22 T 11-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 YH65_02195 5cd9995494df385694f9a5e649d94481 414 SUPERFAMILY SSF46589 1 113 1.15E-22 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 YH65_02195 5cd9995494df385694f9a5e649d94481 414 SUPERFAMILY SSF55681 117 414 1.07E-96 T 11-10-2018 YH65_02195 5cd9995494df385694f9a5e649d94481 414 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 414 38.798 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 YH65_02195 5cd9995494df385694f9a5e649d94481 414 PIRSF PIRSF001529 1 414 1.8E-166 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 YH65_02195 5cd9995494df385694f9a5e649d94481 414 Gene3D G3DSA:3.30.930.10 106 414 3.1E-120 T 11-10-2018 YH65_02195 5cd9995494df385694f9a5e649d94481 414 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 414 1.4E-168 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 YH65_02195 5cd9995494df385694f9a5e649d94481 414 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 221 397 1.3E-36 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 YH65_04200 7a7f1ba558000fa7912b25cd7ecaf3d9 417 SUPERFAMILY SSF56935 27 417 2.33E-61 T 11-10-2018 YH65_04200 7a7f1ba558000fa7912b25cd7ecaf3d9 417 Gene3D G3DSA:2.40.160.60 26 417 2.3E-78 T 11-10-2018 YH65_04200 7a7f1ba558000fa7912b25cd7ecaf3d9 417 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 34 417 1.8E-32 T 11-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) YH65_04145 42d682dedd7b961d25241b47cc54f53a 350 Gene3D G3DSA:2.30.30.40 26 104 5.5E-7 T 11-10-2018 YH65_02555 8fdd56b30e8999f87a63561ccfe366f8 138 Pfam PF08447 PAS fold 29 111 5.1E-20 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 YH65_02555 8fdd56b30e8999f87a63561ccfe366f8 138 SMART SM00086 78 120 7.1E-4 T 11-10-2018 IPR001610 PAC motif YH65_02555 8fdd56b30e8999f87a63561ccfe366f8 138 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 20 115 2.7E-19 T 11-10-2018 IPR000014 PAS domain YH65_02555 8fdd56b30e8999f87a63561ccfe366f8 138 Gene3D G3DSA:3.30.450.20 13 134 6.1E-31 T 11-10-2018 YH65_02555 8fdd56b30e8999f87a63561ccfe366f8 138 SUPERFAMILY SSF55785 18 113 4.71E-31 T 11-10-2018 IPR035965 PAS domain superfamily YH65_05070 1bb956e004ac734847c8df444077879c 121 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 25 103 2.4E-8 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YH65_05070 1bb956e004ac734847c8df444077879c 121 SUPERFAMILY SSF46626 5 105 2.96E-13 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_05070 1bb956e004ac734847c8df444077879c 121 Gene3D G3DSA:1.10.760.10 3 114 2.6E-12 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_02295 ef0f3db5215f019a466b8bdf7b7b969c 408 SUPERFAMILY SSF53756 12 397 4.27E-32 T 11-10-2018 YH65_02295 ef0f3db5215f019a466b8bdf7b7b969c 408 Gene3D G3DSA:3.40.50.2000 227 395 1.2E-17 T 11-10-2018 YH65_02295 ef0f3db5215f019a466b8bdf7b7b969c 408 Gene3D G3DSA:3.40.50.2000 2 226 2.7E-14 T 11-10-2018 YH65_02295 ef0f3db5215f019a466b8bdf7b7b969c 408 Pfam PF00534 Glycosyl transferases group 1 224 382 2.1E-8 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 YH65_02295 ef0f3db5215f019a466b8bdf7b7b969c 408 Pfam PF13579 Glycosyl transferase 4-like domain 20 194 2.4E-6 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 YH65_04005 ff7b3cb0c45baf7bb496b054d3f0a058 340 Gene3D G3DSA:2.40.30.10 266 340 1.8E-15 T 11-10-2018 YH65_04005 ff7b3cb0c45baf7bb496b054d3f0a058 340 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 4 340 35.228 T 11-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 YH65_04005 ff7b3cb0c45baf7bb496b054d3f0a058 340 Gene3D G3DSA:2.30.30.280 205 265 9.9E-17 T 11-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 YH65_04005 ff7b3cb0c45baf7bb496b054d3f0a058 340 Pfam PF03054 tRNA methyl transferase 5 339 3.4E-102 T 11-10-2018 YH65_04005 ff7b3cb0c45baf7bb496b054d3f0a058 340 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 5 339 3.7E-100 T 11-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 YH65_04005 ff7b3cb0c45baf7bb496b054d3f0a058 340 SUPERFAMILY SSF52402 2 234 1.83E-49 T 11-10-2018 YH65_04005 ff7b3cb0c45baf7bb496b054d3f0a058 340 Gene3D G3DSA:3.40.50.620 1 200 5.2E-67 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YH65_08520 265180c54a0ae9aa6d7f5d14e6c30ab1 630 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 132 587 1.0E-216 T 11-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 YH65_08520 265180c54a0ae9aa6d7f5d14e6c30ab1 630 Pfam PF01964 Radical SAM ThiC family 134 584 1.6E-200 T 11-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 YH65_08520 265180c54a0ae9aa6d7f5d14e6c30ab1 630 Pfam PF13667 ThiC-associated domain 20 89 3.0E-26 T 11-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 YH65_08520 265180c54a0ae9aa6d7f5d14e6c30ab1 630 Gene3D G3DSA:3.20.20.540 208 520 3.1E-155 T 11-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 YH65_08520 265180c54a0ae9aa6d7f5d14e6c30ab1 630 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 132 589 99.638 T 11-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 YH65_10890 96fa76f9ca8b0ca44f2439df1775b8ea 427 ProSitePatterns PS00480 Citrate synthase signature. 313 325 - T 11-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 YH65_10890 96fa76f9ca8b0ca44f2439df1775b8ea 427 Gene3D G3DSA:1.10.230.10 278 386 4.8E-132 T 11-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain YH65_10890 96fa76f9ca8b0ca44f2439df1775b8ea 427 SUPERFAMILY SSF48256 8 426 3.66E-142 T 11-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 YH65_10890 96fa76f9ca8b0ca44f2439df1775b8ea 427 PIRSF PIRSF001369 39 427 3.0E-143 T 11-10-2018 IPR024176 Citrate synthase, bacterial-type YH65_10890 96fa76f9ca8b0ca44f2439df1775b8ea 427 Gene3D G3DSA:1.10.580.10 59 421 4.8E-132 T 11-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 YH65_10890 96fa76f9ca8b0ca44f2439df1775b8ea 427 PRINTS PR00143 Citrate synthase signature 167 180 2.6E-49 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 YH65_10890 96fa76f9ca8b0ca44f2439df1775b8ea 427 PRINTS PR00143 Citrate synthase signature 229 244 2.6E-49 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 YH65_10890 96fa76f9ca8b0ca44f2439df1775b8ea 427 PRINTS PR00143 Citrate synthase signature 251 279 2.6E-49 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 YH65_10890 96fa76f9ca8b0ca44f2439df1775b8ea 427 PRINTS PR00143 Citrate synthase signature 306 326 2.6E-49 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 YH65_10890 96fa76f9ca8b0ca44f2439df1775b8ea 427 PRINTS PR00143 Citrate synthase signature 389 403 2.6E-49 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 YH65_10890 96fa76f9ca8b0ca44f2439df1775b8ea 427 PRINTS PR00143 Citrate synthase signature 369 385 2.6E-49 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 YH65_10890 96fa76f9ca8b0ca44f2439df1775b8ea 427 Gene3D G3DSA:2.20.28.60 3 52 2.3E-15 T 11-10-2018 YH65_10890 96fa76f9ca8b0ca44f2439df1775b8ea 427 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 15 427 2.8E-165 T 11-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 YH65_10890 96fa76f9ca8b0ca44f2439df1775b8ea 427 Pfam PF00285 Citrate synthase, C-terminal domain 48 421 1.9E-124 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 YH65_09780 f02030e54fd560f64882f3ae21e20334 366 SUPERFAMILY SSF51004 12 360 1.44E-34 T 11-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily YH65_09780 f02030e54fd560f64882f3ae21e20334 366 Pfam PF02239 Cytochrome D1 heme domain 22 359 1.7E-21 T 11-10-2018 YH65_09780 f02030e54fd560f64882f3ae21e20334 366 Gene3D G3DSA:2.130.10.10 17 226 5.6E-6 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 YH65_09780 f02030e54fd560f64882f3ae21e20334 366 Gene3D G3DSA:2.130.10.10 233 364 1.1E-10 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 YH65_05035 63917b25bc0abb724a66a632806d92d1 186 Pfam PF00156 Phosphoribosyl transferase domain 32 164 2.3E-16 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 YH65_05035 63917b25bc0abb724a66a632806d92d1 186 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 13 184 7.8E-62 T 11-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 YH65_05035 63917b25bc0abb724a66a632806d92d1 186 Gene3D G3DSA:3.40.50.2020 6 186 4.6E-59 T 11-10-2018 YH65_05035 63917b25bc0abb724a66a632806d92d1 186 SUPERFAMILY SSF53271 15 182 7.74E-46 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like YH65_05035 63917b25bc0abb724a66a632806d92d1 186 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 11 185 34.212 T 11-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 YH65_01085 336069ca366051784b84b55b1c8f97dd 144 Pfam PF02391 MoaE protein 7 113 1.5E-14 T 11-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 YH65_01085 336069ca366051784b84b55b1c8f97dd 144 SUPERFAMILY SSF54690 8 139 1.16E-30 T 11-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 YH65_01085 336069ca366051784b84b55b1c8f97dd 144 Gene3D G3DSA:3.90.1170.40 1 144 2.0E-46 T 11-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 YH65_11020 74c70c0249c5dcff0505d5c10f9495e9 354 Gene3D G3DSA:1.10.150.130 58 157 2.1E-18 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal YH65_11020 74c70c0249c5dcff0505d5c10f9495e9 354 Gene3D G3DSA:1.10.443.10 158 343 1.4E-33 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 YH65_11020 74c70c0249c5dcff0505d5c10f9495e9 354 SUPERFAMILY SSF56349 65 332 2.5E-54 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 YH65_11020 74c70c0249c5dcff0505d5c10f9495e9 354 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 65 115 1.7E-6 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 YH65_11020 74c70c0249c5dcff0505d5c10f9495e9 354 Pfam PF00589 Phage integrase family 165 327 2.5E-18 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 YH65_09160 7f0ac55aec9976a9ce1f3a22c0c5166f 437 SUPERFAMILY SSF53623 88 289 1.19E-37 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 YH65_09160 7f0ac55aec9976a9ce1f3a22c0c5166f 437 Pfam PF02875 Mur ligase family, glutamate ligase domain 292 375 9.2E-14 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 YH65_09160 7f0ac55aec9976a9ce1f3a22c0c5166f 437 SUPERFAMILY SSF53244 290 435 9.61E-22 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 YH65_09160 7f0ac55aec9976a9ce1f3a22c0c5166f 437 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 2 433 5.3E-107 T 11-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 YH65_09160 7f0ac55aec9976a9ce1f3a22c0c5166f 437 Gene3D G3DSA:3.40.50.720 2 88 1.3E-26 T 11-10-2018 YH65_09160 7f0ac55aec9976a9ce1f3a22c0c5166f 437 Pfam PF01225 Mur ligase family, catalytic domain 2 99 4.0E-19 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 YH65_09160 7f0ac55aec9976a9ce1f3a22c0c5166f 437 Pfam PF08245 Mur ligase middle domain 106 213 1.6E-10 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 YH65_09160 7f0ac55aec9976a9ce1f3a22c0c5166f 437 SUPERFAMILY SSF51984 1 88 1.16E-23 T 11-10-2018 YH65_09160 7f0ac55aec9976a9ce1f3a22c0c5166f 437 Gene3D G3DSA:3.90.190.20 288 435 1.2E-28 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 YH65_09160 7f0ac55aec9976a9ce1f3a22c0c5166f 437 Gene3D G3DSA:3.40.1190.10 90 287 8.1E-36 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 YH65_01870 45a18af65ced2331fde9525315c4876d 189 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 2 176 4.1E-57 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 YH65_01870 45a18af65ced2331fde9525315c4876d 189 Pfam PF01195 Peptidyl-tRNA hydrolase 3 179 1.3E-55 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 YH65_01870 45a18af65ced2331fde9525315c4876d 189 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 1 174 34.582 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 YH65_01870 45a18af65ced2331fde9525315c4876d 189 Gene3D G3DSA:3.40.50.1470 1 184 3.4E-63 T 11-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 YH65_01870 45a18af65ced2331fde9525315c4876d 189 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 14 27 - T 11-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 YH65_01870 45a18af65ced2331fde9525315c4876d 189 SUPERFAMILY SSF53178 2 180 2.35E-61 T 11-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 YH65_01870 45a18af65ced2331fde9525315c4876d 189 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 104 114 - T 11-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 YH65_02480 5465cb91a30ca03be86653523b200ba9 130 SUPERFAMILY SSF48013 3 128 6.93E-36 T 11-10-2018 IPR035926 NusB-like superfamily YH65_02480 5465cb91a30ca03be86653523b200ba9 130 Pfam PF01029 NusB family 5 128 2.6E-34 T 11-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 YH65_02480 5465cb91a30ca03be86653523b200ba9 130 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 4 128 8.3E-39 T 11-10-2018 IPR011605 NusB antitermination factor GO:0006353 YH65_02480 5465cb91a30ca03be86653523b200ba9 130 Gene3D G3DSA:1.10.940.10 1 130 8.4E-39 T 11-10-2018 IPR035926 NusB-like superfamily YH65_02480 5465cb91a30ca03be86653523b200ba9 130 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 2 130 17.983 T 11-10-2018 IPR011605 NusB antitermination factor GO:0006353 YH65_07810 e683612038ee2d00c89d447b76915aec 391 Pfam PF02321 Outer membrane efflux protein 21 196 6.2E-8 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 YH65_07810 e683612038ee2d00c89d447b76915aec 391 Pfam PF02321 Outer membrane efflux protein 238 385 9.8E-8 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 YH65_07810 e683612038ee2d00c89d447b76915aec 391 SUPERFAMILY SSF56954 7 387 3.92E-28 T 11-10-2018 YH65_07810 e683612038ee2d00c89d447b76915aec 391 Gene3D G3DSA:1.20.1600.10 21 388 1.3E-22 T 11-10-2018 YH65_08325 3142693194a8a415f6df9c11dd200057 266 SUPERFAMILY SSF111369 24 263 4.84E-15 T 11-10-2018 YH65_08325 3142693194a8a415f6df9c11dd200057 266 Gene3D G3DSA:2.40.30.170 22 263 2.0E-35 T 11-10-2018 YH65_08325 3142693194a8a415f6df9c11dd200057 266 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 22 258 1.3E-28 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YH65_08325 3142693194a8a415f6df9c11dd200057 266 Gene3D G3DSA:1.10.287.470 67 155 2.0E-35 T 11-10-2018 YH65_08325 3142693194a8a415f6df9c11dd200057 266 Gene3D G3DSA:2.40.50.100 33 190 2.0E-35 T 11-10-2018 YH65_02155 bf1b3b830206699706d836c0a53e8cc3 330 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 3 127 2.3E-18 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain YH65_02155 bf1b3b830206699706d836c0a53e8cc3 330 SUPERFAMILY SSF53927 3 165 3.01E-31 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 YH65_02155 bf1b3b830206699706d836c0a53e8cc3 330 SUPERFAMILY SSF53597 168 310 7.07E-25 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 YH65_02155 bf1b3b830206699706d836c0a53e8cc3 330 Gene3D G3DSA:3.40.430.10 164 287 1.0E-16 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 YH65_02155 bf1b3b830206699706d836c0a53e8cc3 330 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 7 262 3.2E-59 T 11-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 YH65_02155 bf1b3b830206699706d836c0a53e8cc3 330 Pfam PF01872 RibD C-terminal domain 171 295 1.9E-8 T 11-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 YH65_02155 bf1b3b830206699706d836c0a53e8cc3 330 Gene3D G3DSA:3.40.140.10 1 163 3.3E-31 T 11-10-2018 YH65_04630 c240375d5981e22db0df646b623c182b 222 SUPERFAMILY SSF53448 1 218 8.34E-55 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YH65_04630 c240375d5981e22db0df646b623c182b 222 Pfam PF00483 Nucleotidyl transferase 2 117 5.2E-19 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 YH65_04630 c240375d5981e22db0df646b623c182b 222 Gene3D G3DSA:3.90.550.10 1 220 5.4E-57 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YH65_06390 33eb3562373b89821df1d5f2205af582 236 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 23 229 1.8E-19 T 11-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 YH65_09275 5494ba9f4b572ef91e81e620e7a158ce 124 SUPERFAMILY SSF49764 18 123 1.1E-30 T 11-10-2018 IPR008978 HSP20-like chaperone YH65_09275 5494ba9f4b572ef91e81e620e7a158ce 124 Pfam PF00011 Hsp20/alpha crystallin family 26 123 3.6E-23 T 11-10-2018 IPR002068 Alpha crystallin/Hsp20 domain YH65_09275 5494ba9f4b572ef91e81e620e7a158ce 124 Gene3D G3DSA:2.60.40.790 6 124 9.1E-28 T 11-10-2018 IPR008978 HSP20-like chaperone YH65_03980 e0dfb522dd39668acf40d398c5a44297 162 ProSitePatterns PS01029 Dehydroquinase class II signature. 6 23 - T 11-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 YH65_03980 e0dfb522dd39668acf40d398c5a44297 162 SUPERFAMILY SSF52304 1 150 2.22E-61 T 11-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 YH65_03980 e0dfb522dd39668acf40d398c5a44297 162 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 2 141 3.5E-66 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 YH65_03980 e0dfb522dd39668acf40d398c5a44297 162 PIRSF PIRSF001399 1 145 8.3E-61 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 YH65_03980 e0dfb522dd39668acf40d398c5a44297 162 Gene3D G3DSA:3.40.50.9100 1 146 3.0E-62 T 11-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 YH65_03980 e0dfb522dd39668acf40d398c5a44297 162 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 162 68.793 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 YH65_03980 e0dfb522dd39668acf40d398c5a44297 162 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 3 138 7.0E-61 T 11-10-2018 YH65_03980 e0dfb522dd39668acf40d398c5a44297 162 Pfam PF01220 Dehydroquinase class II 2 136 1.4E-59 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 YH65_00060 381c236a007647edc1fe91be0bf47f49 195 Gene3D G3DSA:3.90.226.10 1 194 1.5E-83 T 11-10-2018 YH65_00060 381c236a007647edc1fe91be0bf47f49 195 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 90 101 - T 11-10-2018 IPR018215 ClpP, Ser active site YH65_00060 381c236a007647edc1fe91be0bf47f49 195 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 3 193 43.725 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 YH65_00060 381c236a007647edc1fe91be0bf47f49 195 SUPERFAMILY SSF52096 10 191 1.49E-71 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily YH65_00060 381c236a007647edc1fe91be0bf47f49 195 Pfam PF00574 Clp protease 13 192 5.9E-86 T 11-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA YH65_00060 381c236a007647edc1fe91be0bf47f49 195 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 1 192 3.3E-104 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 YH65_00060 381c236a007647edc1fe91be0bf47f49 195 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 112 125 - T 11-10-2018 IPR033135 ClpP, histidine active site YH65_00060 381c236a007647edc1fe91be0bf47f49 195 PRINTS PR00127 Clp protease catalytic subunit P signature 111 130 1.4E-52 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 YH65_00060 381c236a007647edc1fe91be0bf47f49 195 PRINTS PR00127 Clp protease catalytic subunit P signature 168 187 1.4E-52 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 YH65_00060 381c236a007647edc1fe91be0bf47f49 195 PRINTS PR00127 Clp protease catalytic subunit P signature 90 107 1.4E-52 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 YH65_00060 381c236a007647edc1fe91be0bf47f49 195 PRINTS PR00127 Clp protease catalytic subunit P signature 19 34 1.4E-52 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 YH65_00060 381c236a007647edc1fe91be0bf47f49 195 PRINTS PR00127 Clp protease catalytic subunit P signature 59 79 1.4E-52 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 YH65_04765 03bc8ecfcd8ad1ef1f1e66a6643b99e7 267 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YH65_04765 03bc8ecfcd8ad1ef1f1e66a6643b99e7 267 Pfam PF00005 ABC transporter 19 165 3.5E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YH65_04765 03bc8ecfcd8ad1ef1f1e66a6643b99e7 267 SMART SM00382 28 212 3.9E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain YH65_04765 03bc8ecfcd8ad1ef1f1e66a6643b99e7 267 SUPERFAMILY SSF52540 3 209 4.34E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_04765 03bc8ecfcd8ad1ef1f1e66a6643b99e7 267 Gene3D G3DSA:3.40.50.300 1 230 6.9E-58 T 11-10-2018 YH65_09115 8508d23444f88d39ebe0b16de9c7e078 336 SUPERFAMILY SSF50998 81 299 7.06E-10 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily YH65_09115 8508d23444f88d39ebe0b16de9c7e078 336 Gene3D G3DSA:2.130.10.10 76 329 4.2E-13 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 YH65_01210 57fba8eecab707b59e578adb47b0414a 124 SUPERFAMILY SSF48300 4 60 1.96E-15 T 11-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_01210 57fba8eecab707b59e578adb47b0414a 124 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 51 9.1E-19 T 11-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_01210 57fba8eecab707b59e578adb47b0414a 124 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 124 24.597 T 11-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_01210 57fba8eecab707b59e578adb47b0414a 124 SUPERFAMILY SSF54736 53 124 1.92E-24 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like YH65_01210 57fba8eecab707b59e578adb47b0414a 124 Gene3D G3DSA:1.20.5.710 3 53 2.9E-20 T 11-10-2018 YH65_01210 57fba8eecab707b59e578adb47b0414a 124 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 58 124 1.2E-29 T 11-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_01210 57fba8eecab707b59e578adb47b0414a 124 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 124 1.3E-46 T 11-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_01210 57fba8eecab707b59e578adb47b0414a 124 Gene3D G3DSA:3.30.1390.10 54 124 1.9E-30 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like YH65_01210 57fba8eecab707b59e578adb47b0414a 124 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 59 124 9.0E-15 T 11-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_01490 0b640cc710bc783f64a67ec171b0314d 337 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 4 333 2.1E-140 T 11-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 YH65_01490 0b640cc710bc783f64a67ec171b0314d 337 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 150 178 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 YH65_01490 0b640cc710bc783f64a67ec171b0314d 337 Gene3D G3DSA:3.40.50.720 4 325 1.5E-126 T 11-10-2018 YH65_01490 0b640cc710bc783f64a67ec171b0314d 337 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 325 7.8E-94 T 11-10-2018 IPR016040 NAD(P)-binding domain YH65_01490 0b640cc710bc783f64a67ec171b0314d 337 Gene3D G3DSA:3.90.25.10 205 332 1.5E-126 T 11-10-2018 YH65_01490 0b640cc710bc783f64a67ec171b0314d 337 SUPERFAMILY SSF51735 1 335 9.18E-88 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily YH65_08000 83fb35cf820b4408b242848f2ef6d672 391 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 390 3.0E-123 T 11-10-2018 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain YH65_08000 83fb35cf820b4408b242848f2ef6d672 391 SUPERFAMILY SSF52440 178 288 1.27E-16 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily YH65_08000 83fb35cf820b4408b242848f2ef6d672 391 Gene3D G3DSA:3.30.1490.330 272 350 4.8E-24 T 11-10-2018 YH65_08000 83fb35cf820b4408b242848f2ef6d672 391 SUPERFAMILY SSF56059 11 389 3.53E-64 T 11-10-2018 YH65_10860 d26c52b5938cbcdc3d94ec98b5c00200 254 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 3 253 48.457 T 11-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 YH65_10860 d26c52b5938cbcdc3d94ec98b5c00200 254 Gene3D G3DSA:3.20.20.70 3 254 7.2E-109 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YH65_10860 d26c52b5938cbcdc3d94ec98b5c00200 254 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 4 253 1.6E-115 T 11-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 YH65_10860 d26c52b5938cbcdc3d94ec98b5c00200 254 Pfam PF00977 Histidine biosynthesis protein 7 236 1.0E-88 T 11-10-2018 IPR006062 Histidine biosynthesis GO:0000105 YH65_10860 d26c52b5938cbcdc3d94ec98b5c00200 254 SUPERFAMILY SSF51366 5 253 1.65E-82 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 YH65_07410 28ef78a262bccad272c7727c90d412e4 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 244 253 1.1E-37 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 YH65_07410 28ef78a262bccad272c7727c90d412e4 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 122 136 1.1E-37 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 YH65_07410 28ef78a262bccad272c7727c90d412e4 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 156 174 1.1E-37 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 YH65_07410 28ef78a262bccad272c7727c90d412e4 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 193 210 1.1E-37 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 YH65_07410 28ef78a262bccad272c7727c90d412e4 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 222 233 1.1E-37 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 YH65_07410 28ef78a262bccad272c7727c90d412e4 298 SUPERFAMILY SSF52096 19 273 6.22E-81 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily YH65_07410 28ef78a262bccad272c7727c90d412e4 298 Pfam PF01039 Carboxyl transferase domain 72 233 3.3E-22 T 11-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 YH65_07410 28ef78a262bccad272c7727c90d412e4 298 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 10 276 7.7E-126 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 YH65_07410 28ef78a262bccad272c7727c90d412e4 298 Gene3D G3DSA:3.90.226.10 18 279 1.7E-85 T 11-10-2018 YH65_07410 28ef78a262bccad272c7727c90d412e4 298 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 3 274 38.914 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 YH65_06395 a62fd1241dd9b563a1c0c24b181329a9 239 Pfam PF02663 FmdE, Molybdenum formylmethanofuran dehydrogenase operon 71 209 1.6E-15 T 11-10-2018 IPR003814 Formylmethanofuran dehydrogenase, subunit E domain YH65_06395 a62fd1241dd9b563a1c0c24b181329a9 239 SUPERFAMILY SSF143555 63 215 1.16E-7 T 11-10-2018 YH65_06395 a62fd1241dd9b563a1c0c24b181329a9 239 Gene3D G3DSA:3.30.1330.130 59 215 1.0E-5 T 11-10-2018 YH65_09190 d9063285ba53db29ba19e1fa428f0e3e 705 Pfam PF03781 Sulfatase-modifying factor enzyme 1 192 451 6.9E-30 T 11-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 YH65_09190 d9063285ba53db29ba19e1fa428f0e3e 705 TIGRFAM TIGR04344 ovoA_Nterm: 5-histidylcysteine sulfoxide synthase 7 451 1.3E-210 T 11-10-2018 IPR027577 5-histidylcysteine sulfoxide synthase YH65_09190 d9063285ba53db29ba19e1fa428f0e3e 705 TIGRFAM TIGR04345 ovoA_Cterm: putative 4-mercaptohistidine N1-methyltranferase 464 704 2.3E-103 T 11-10-2018 IPR027625 Putative 4-mercaptohistidine N1-methyltranferase, OvoA C-terminal domain YH65_09190 d9063285ba53db29ba19e1fa428f0e3e 705 SUPERFAMILY SSF53335 493 688 1.29E-26 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YH65_09190 d9063285ba53db29ba19e1fa428f0e3e 705 SUPERFAMILY SSF56436 190 452 1.29E-55 T 11-10-2018 IPR016187 C-type lectin fold YH65_09190 d9063285ba53db29ba19e1fa428f0e3e 705 Pfam PF13847 Methyltransferase domain 507 640 6.1E-12 T 11-10-2018 IPR025714 Methyltransferase domain YH65_09190 d9063285ba53db29ba19e1fa428f0e3e 705 Gene3D G3DSA:3.40.50.150 482 697 2.2E-25 T 11-10-2018 YH65_09190 d9063285ba53db29ba19e1fa428f0e3e 705 Pfam PF12867 DinB superfamily 31 161 7.7E-7 T 11-10-2018 IPR024775 DinB-like domain YH65_09190 d9063285ba53db29ba19e1fa428f0e3e 705 Gene3D G3DSA:3.90.1580.10 180 464 3.5E-27 T 11-10-2018 YH65_06750 5b8c5a92ee87c6e526a902c997ab4659 267 Hamap MF_00055 MEMO1 family protein . 2 265 45.906 T 11-10-2018 IPR002737 MEMO1 family Reactome: R-HSA-6785631 YH65_06750 5b8c5a92ee87c6e526a902c997ab4659 267 Pfam PF01875 Memo-like protein 6 262 2.5E-50 T 11-10-2018 IPR002737 MEMO1 family Reactome: R-HSA-6785631 YH65_06750 5b8c5a92ee87c6e526a902c997ab4659 267 Gene3D G3DSA:3.40.830.10 2 265 3.5E-58 T 11-10-2018 YH65_06750 5b8c5a92ee87c6e526a902c997ab4659 267 TIGRFAM TIGR04336 AmmeMemoSam_B: AmmeMemoRadiSam system protein B 4 264 2.2E-76 T 11-10-2018 YH65_09385 9196b606a8ea32941414ede4826a8154 164 PIRSF PIRSF001338 1 164 6.1E-62 T 11-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 YH65_09385 9196b606a8ea32941414ede4826a8154 164 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 4 157 29.337 T 11-10-2018 IPR033747 Class I PurE YH65_09385 9196b606a8ea32941414ede4826a8154 164 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 4 159 2.9E-56 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 YH65_09385 9196b606a8ea32941414ede4826a8154 164 Gene3D G3DSA:3.40.50.7700 1 162 7.4E-62 T 11-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 YH65_09385 9196b606a8ea32941414ede4826a8154 164 Pfam PF00731 AIR carboxylase 4 149 1.2E-55 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 YH65_09385 9196b606a8ea32941414ede4826a8154 164 SUPERFAMILY SSF52255 3 160 4.06E-58 T 11-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 YH65_09385 9196b606a8ea32941414ede4826a8154 164 SMART SM01001 2 153 4.4E-88 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 YH65_07785 571bf9790725fc6e531f22af658e841c 361 PRINTS PR00344 Bacterial sensor protein C-terminal signature 306 324 3.6E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YH65_07785 571bf9790725fc6e531f22af658e841c 361 PRINTS PR00344 Bacterial sensor protein C-terminal signature 330 343 3.6E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YH65_07785 571bf9790725fc6e531f22af658e841c 361 PRINTS PR00344 Bacterial sensor protein C-terminal signature 295 305 3.6E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YH65_07785 571bf9790725fc6e531f22af658e841c 361 PRINTS PR00344 Bacterial sensor protein C-terminal signature 279 293 3.6E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YH65_07785 571bf9790725fc6e531f22af658e841c 361 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 250 342 1.3E-15 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YH65_07785 571bf9790725fc6e531f22af658e841c 361 Gene3D G3DSA:3.30.565.10 203 344 4.5E-26 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YH65_07785 571bf9790725fc6e531f22af658e841c 361 SUPERFAMILY SSF47384 142 200 3.53E-7 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 YH65_07785 571bf9790725fc6e531f22af658e841c 361 Gene3D G3DSA:1.10.287.130 140 202 1.3E-7 T 11-10-2018 YH65_07785 571bf9790725fc6e531f22af658e841c 361 SMART SM00388 148 213 0.0092 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YH65_07785 571bf9790725fc6e531f22af658e841c 361 SUPERFAMILY SSF55874 209 347 1.83E-25 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YH65_07785 571bf9790725fc6e531f22af658e841c 361 Pfam PF00512 His Kinase A (phospho-acceptor) domain 150 198 2.2E-6 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YH65_07785 571bf9790725fc6e531f22af658e841c 361 SMART SM00387 246 346 3.4E-20 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YH65_08895 ece64324e6c8024a33bf75476e03aa72 235 Hamap MF_01589 Carboxy-S-adenosyl-L-methionine synthase [cmoA]. 1 235 37.637 T 11-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 YH65_08895 ece64324e6c8024a33bf75476e03aa72 235 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 2 234 1.7E-70 T 11-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 YH65_08895 ece64324e6c8024a33bf75476e03aa72 235 PIRSF PIRSF006325 1 235 4.5E-80 T 11-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 YH65_08895 ece64324e6c8024a33bf75476e03aa72 235 SUPERFAMILY SSF53335 15 234 1.67E-34 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YH65_08895 ece64324e6c8024a33bf75476e03aa72 235 Pfam PF13649 Methyltransferase domain 56 151 1.2E-10 T 11-10-2018 YH65_08895 ece64324e6c8024a33bf75476e03aa72 235 Gene3D G3DSA:3.40.50.150 16 235 2.3E-57 T 11-10-2018 YH65_07760 2064e6dba504980036ea90d0c94ab73f 373 Pfam PF03773 Predicted permease 5 312 9.7E-43 T 11-10-2018 IPR005524 Predicted permease DUF318 YH65_09320 540ecbfd73e60e8f15a35176f791f024 178 SUPERFAMILY SSF50447 8 86 1.59E-8 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily YH65_09320 540ecbfd73e60e8f15a35176f791f024 178 Gene3D G3DSA:2.30.30.240 93 178 3.2E-9 T 11-10-2018 YH65_09320 540ecbfd73e60e8f15a35176f791f024 178 SUPERFAMILY SSF50346 98 171 6.28E-10 T 11-10-2018 IPR011033 PRC-barrel-like superfamily YH65_09320 540ecbfd73e60e8f15a35176f791f024 178 Gene3D G3DSA:2.40.30.60 9 87 9.6E-9 T 11-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 YH65_09320 540ecbfd73e60e8f15a35176f791f024 178 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 9 173 2.2E-29 T 11-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 YH65_09320 540ecbfd73e60e8f15a35176f791f024 178 Pfam PF01782 RimM N-terminal domain 11 85 3.0E-12 T 11-10-2018 IPR002676 RimM, N-terminal GO:0006364 YH65_09320 540ecbfd73e60e8f15a35176f791f024 178 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 8 174 17.038 T 11-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 YH65_08830 270b24480a57346ea15b124dd3afcc31 165 Gene3D G3DSA:3.90.920.20 1 165 6.7E-69 T 11-10-2018 YH65_08830 270b24480a57346ea15b124dd3afcc31 165 SUPERFAMILY SSF56747 2 163 9.15E-64 T 11-10-2018 YH65_08830 270b24480a57346ea15b124dd3afcc31 165 Pfam PF08966 Domain of unknown function (DUF1882) 3 66 2.0E-24 T 11-10-2018 IPR015061 Domain of unknown function DUF1882 YH65_07610 9d9807dc8060324223ee1a1cda1199a0 297 PIRSF PIRSF001365 3 294 1.1E-83 T 11-10-2018 IPR002220 DapA-like GO:0016829 YH65_07610 9d9807dc8060324223ee1a1cda1199a0 297 SMART SM01130 4 293 6.8E-132 T 11-10-2018 IPR002220 DapA-like GO:0016829 YH65_07610 9d9807dc8060324223ee1a1cda1199a0 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 74 92 1.1E-33 T 11-10-2018 IPR002220 DapA-like GO:0016829 YH65_07610 9d9807dc8060324223ee1a1cda1199a0 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 106 122 1.1E-33 T 11-10-2018 IPR002220 DapA-like GO:0016829 YH65_07610 9d9807dc8060324223ee1a1cda1199a0 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 131 148 1.1E-33 T 11-10-2018 IPR002220 DapA-like GO:0016829 YH65_07610 9d9807dc8060324223ee1a1cda1199a0 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 37 58 1.1E-33 T 11-10-2018 IPR002220 DapA-like GO:0016829 YH65_07610 9d9807dc8060324223ee1a1cda1199a0 297 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 136 167 - T 11-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 YH65_07610 9d9807dc8060324223ee1a1cda1199a0 297 Gene3D G3DSA:3.20.20.70 1 297 1.0E-115 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YH65_07610 9d9807dc8060324223ee1a1cda1199a0 297 SUPERFAMILY SSF51569 5 293 2.41E-94 T 11-10-2018 YH65_07610 9d9807dc8060324223ee1a1cda1199a0 297 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 9 292 2.4E-106 T 11-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 YH65_07610 9d9807dc8060324223ee1a1cda1199a0 297 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 4 291 62.123 T 11-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 YH65_07610 9d9807dc8060324223ee1a1cda1199a0 297 Pfam PF00701 Dihydrodipicolinate synthetase family 6 291 1.9E-89 T 11-10-2018 IPR002220 DapA-like GO:0016829 YH65_09850 d155ef426cca6fc882b4678bea8224c4 456 SUPERFAMILY SSF56235 2 228 1.89E-63 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal YH65_09850 d155ef426cca6fc882b4678bea8224c4 456 Gene3D G3DSA:3.40.50.2020 261 425 2.1E-148 T 11-10-2018 YH65_09850 d155ef426cca6fc882b4678bea8224c4 456 PIRSF PIRSF000485 1 450 1.3E-162 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 YH65_09850 d155ef426cca6fc882b4678bea8224c4 456 Pfam PF13537 Glutamine amidotransferase domain 71 199 2.0E-22 T 11-10-2018 IPR017932 Glutamine amidotransferase type 2 domain YH65_09850 d155ef426cca6fc882b4678bea8224c4 456 Pfam PF00156 Phosphoribosyl transferase domain 267 371 6.9E-10 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 YH65_09850 d155ef426cca6fc882b4678bea8224c4 456 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 441 1.9E-155 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 YH65_09850 d155ef426cca6fc882b4678bea8224c4 456 SUPERFAMILY SSF53271 236 444 2.29E-71 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like YH65_09850 d155ef426cca6fc882b4678bea8224c4 456 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 441 44.332 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 YH65_09850 d155ef426cca6fc882b4678bea8224c4 456 Gene3D G3DSA:3.60.20.10 2 442 2.1E-148 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal YH65_03735 c94752b5b8874be9b41b67ffb4304d13 105 Pfam PF00085 Thioredoxin 4 92 1.2E-9 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 YH65_03735 c94752b5b8874be9b41b67ffb4304d13 105 Gene3D G3DSA:3.40.30.10 1 99 1.5E-20 T 11-10-2018 YH65_03735 c94752b5b8874be9b41b67ffb4304d13 105 SUPERFAMILY SSF52833 2 98 6.24E-19 T 11-10-2018 IPR036249 Thioredoxin-like superfamily YH65_10450 f2079044ca0ae00269f1d91fdde4346f 196 SUPERFAMILY SSF103247 67 189 3.01E-24 T 11-10-2018 IPR035923 TT1751-like domain superfamily YH65_10450 f2079044ca0ae00269f1d91fdde4346f 196 Gene3D G3DSA:3.30.310.70 62 190 6.4E-11 T 11-10-2018 IPR035923 TT1751-like domain superfamily YH65_10450 f2079044ca0ae00269f1d91fdde4346f 196 Pfam PF03625 Domain of unknown function DUF302 111 157 4.3E-9 T 11-10-2018 IPR005180 Domain of unknown function DUF302 YH65_07940 019dca0533077c5bf244db9c180e318f 298 Pfam PF00348 Polyprenyl synthetase 28 240 1.3E-56 T 11-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 YH65_07940 019dca0533077c5bf244db9c180e318f 298 Gene3D G3DSA:1.10.600.10 1 298 6.1E-89 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily YH65_07940 019dca0533077c5bf244db9c180e318f 298 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 182 194 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site YH65_07940 019dca0533077c5bf244db9c180e318f 298 SUPERFAMILY SSF48576 24 292 1.49E-67 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily YH65_08765 bdca12c3e1087a6f3ab5ca2effd422d9 134 SUPERFAMILY SSF52833 11 128 1.31E-22 T 11-10-2018 IPR036249 Thioredoxin-like superfamily YH65_08765 bdca12c3e1087a6f3ab5ca2effd422d9 134 Pfam PF13899 Thioredoxin-like 21 102 1.1E-10 T 11-10-2018 YH65_08765 bdca12c3e1087a6f3ab5ca2effd422d9 134 Gene3D G3DSA:3.40.30.10 13 134 3.2E-23 T 11-10-2018 YH65_02710 34bad722254cf19439f36787f40f699a 97 SUPERFAMILY SSF54909 1 95 1.43E-24 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel YH65_02710 34bad722254cf19439f36787f40f699a 97 SMART SM00886 2 96 2.8E-31 T 11-10-2018 IPR013097 Stress responsive alpha-beta barrel YH65_02710 34bad722254cf19439f36787f40f699a 97 Pfam PF07876 Stress responsive A/B Barrel Domain 2 94 6.4E-27 T 11-10-2018 IPR013097 Stress responsive alpha-beta barrel YH65_02710 34bad722254cf19439f36787f40f699a 97 Gene3D G3DSA:3.30.70.100 1 96 1.1E-26 T 11-10-2018 YH65_03020 e27dd0d9d0c6bc326685fd6d781a100d 213 PIRSF PIRSF001435 1 212 2.2E-44 T 11-10-2018 YH65_03020 e27dd0d9d0c6bc326685fd6d781a100d 213 Hamap MF_00942 Endonuclease III [nth]. 1 211 33.192 T 11-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 YH65_03020 e27dd0d9d0c6bc326685fd6d781a100d 213 SMART SM00478 41 187 6.4E-48 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 YH65_03020 e27dd0d9d0c6bc326685fd6d781a100d 213 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 37 170 5.5E-24 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 YH65_03020 e27dd0d9d0c6bc326685fd6d781a100d 213 Gene3D G3DSA:1.10.340.30 24 135 5.7E-66 T 11-10-2018 YH65_03020 e27dd0d9d0c6bc326685fd6d781a100d 213 SUPERFAMILY SSF48150 6 208 2.2E-64 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 YH65_03020 e27dd0d9d0c6bc326685fd6d781a100d 213 Gene3D G3DSA:1.10.1670.10 18 205 5.7E-66 T 11-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 YH65_03020 e27dd0d9d0c6bc326685fd6d781a100d 213 TIGRFAM TIGR01083 nth: endonuclease III 7 196 7.3E-70 T 11-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 YH65_09235 bdfc875db00d0a8a8ad040bda3b08e46 306 Gene3D G3DSA:3.40.50.1100 5 300 2.9E-118 T 11-10-2018 YH65_09235 bdfc875db00d0a8a8ad040bda3b08e46 306 Gene3D G3DSA:3.40.50.1100 44 143 2.9E-118 T 11-10-2018 YH65_09235 bdfc875db00d0a8a8ad040bda3b08e46 306 TIGRFAM TIGR01139 cysK: cysteine synthase A 6 304 2.1E-129 T 11-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 YH65_09235 bdfc875db00d0a8a8ad040bda3b08e46 306 SUPERFAMILY SSF53686 2 304 4.19E-98 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme YH65_09235 bdfc875db00d0a8a8ad040bda3b08e46 306 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 7 293 4.3E-65 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme YH65_09235 bdfc875db00d0a8a8ad040bda3b08e46 306 TIGRFAM TIGR01136 cysKM: cysteine synthase 6 304 1.0E-125 T 11-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 YH65_09235 bdfc875db00d0a8a8ad040bda3b08e46 306 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 32 50 - T 11-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 YH65_06765 b409b3f745ca08bdfcd5c54c69cf0c30 471 PIRSF PIRSF002457 1 471 3.5E-154 T 11-10-2018 IPR030676 Citrate carrier CitT-related YH65_06765 b409b3f745ca08bdfcd5c54c69cf0c30 471 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 29 466 1.6E-104 T 11-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 YH65_06765 b409b3f745ca08bdfcd5c54c69cf0c30 471 Pfam PF00939 Sodium:sulfate symporter transmembrane region 11 468 1.4E-119 T 11-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 YH65_10060 1504b338f157421ae0bcd1d93f2456db 410 SUPERFAMILY SSF52518 9 257 2.29E-67 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold YH65_10060 1504b338f157421ae0bcd1d93f2456db 410 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 268 370 1.2E-26 T 11-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II YH65_10060 1504b338f157421ae0bcd1d93f2456db 410 SUPERFAMILY SSF52922 259 388 1.7E-39 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 YH65_10060 1504b338f157421ae0bcd1d93f2456db 410 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 22 245 3.5E-73 T 11-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 YH65_10060 1504b338f157421ae0bcd1d93f2456db 410 Gene3D G3DSA:3.40.50.920 259 397 1.4E-42 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 YH65_10060 1504b338f157421ae0bcd1d93f2456db 410 Gene3D G3DSA:3.40.50.970 8 258 2.8E-90 T 11-10-2018 YH65_07170 3673eb3cbf9c33dafc7730e0796be56d 226 Gene3D G3DSA:1.10.4010.10 1 226 2.7E-79 T 11-10-2018 YH65_07170 3673eb3cbf9c33dafc7730e0796be56d 226 SUPERFAMILY SSF101386 1 225 1.48E-67 T 11-10-2018 YH65_07170 3673eb3cbf9c33dafc7730e0796be56d 226 Pfam PF08761 dUTPase 4 182 1.5E-35 T 11-10-2018 IPR014871 dUTPase/dCTP pyrophosphatase KEGG: 00240+3.6.1.12 YH65_00520 d6d8155604d1e6fefc1c32f0d4ad13b2 185 Pfam PF01066 CDP-alcohol phosphatidyltransferase 11 75 1.2E-15 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 YH65_00520 d6d8155604d1e6fefc1c32f0d4ad13b2 185 Gene3D G3DSA:1.20.120.1760 9 181 1.1E-14 T 11-10-2018 YH65_00520 d6d8155604d1e6fefc1c32f0d4ad13b2 185 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 53 75 - T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 YH65_04650 a6bbb0b7e2d26e6b89085ab20f923876 340 Gene3D G3DSA:1.10.760.10 52 191 2.1E-91 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_04650 a6bbb0b7e2d26e6b89085ab20f923876 340 Pfam PF03150 Di-haem cytochrome c peroxidase 55 204 6.7E-40 T 11-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 YH65_04650 a6bbb0b7e2d26e6b89085ab20f923876 340 Gene3D G3DSA:1.10.760.10 192 318 2.1E-91 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_04650 a6bbb0b7e2d26e6b89085ab20f923876 340 SUPERFAMILY SSF46626 192 336 1.3E-34 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_04650 a6bbb0b7e2d26e6b89085ab20f923876 340 PIRSF PIRSF000294 4 339 4.3E-122 T 11-10-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 YH65_04650 a6bbb0b7e2d26e6b89085ab20f923876 340 Pfam PF00034 Cytochrome c 213 314 6.3E-8 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YH65_04650 a6bbb0b7e2d26e6b89085ab20f923876 340 SUPERFAMILY SSF46626 45 193 4.86E-42 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_01455 1dce8d5bf1b8e80a44546953cc373745 479 SUPERFAMILY SSF50447 238 334 2.05E-20 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily YH65_01455 1dce8d5bf1b8e80a44546953cc373745 479 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 31 210 5.9E-12 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 YH65_01455 1dce8d5bf1b8e80a44546953cc373745 479 Pfam PF00009 Elongation factor Tu GTP binding domain 23 210 1.5E-41 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YH65_01455 1dce8d5bf1b8e80a44546953cc373745 479 SUPERFAMILY SSF50465 337 439 2.4E-32 T 11-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal YH65_01455 1dce8d5bf1b8e80a44546953cc373745 479 Gene3D G3DSA:2.40.30.10 335 440 4.3E-34 T 11-10-2018 YH65_01455 1dce8d5bf1b8e80a44546953cc373745 479 Gene3D G3DSA:2.40.30.10 238 333 1.2E-24 T 11-10-2018 YH65_01455 1dce8d5bf1b8e80a44546953cc373745 479 Gene3D G3DSA:3.40.50.300 1 236 2.4E-71 T 11-10-2018 YH65_01455 1dce8d5bf1b8e80a44546953cc373745 479 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 25 438 2.0E-184 T 11-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 YH65_01455 1dce8d5bf1b8e80a44546953cc373745 479 PRINTS PR00315 GTP-binding elongation factor signature 26 39 5.7E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YH65_01455 1dce8d5bf1b8e80a44546953cc373745 479 PRINTS PR00315 GTP-binding elongation factor signature 160 169 5.7E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YH65_01455 1dce8d5bf1b8e80a44546953cc373745 479 PRINTS PR00315 GTP-binding elongation factor signature 87 95 5.7E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YH65_01455 1dce8d5bf1b8e80a44546953cc373745 479 PRINTS PR00315 GTP-binding elongation factor signature 107 117 5.7E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YH65_01455 1dce8d5bf1b8e80a44546953cc373745 479 PRINTS PR00315 GTP-binding elongation factor signature 123 134 5.7E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YH65_01455 1dce8d5bf1b8e80a44546953cc373745 479 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 16 468 48.675 T 11-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 YH65_01455 1dce8d5bf1b8e80a44546953cc373745 479 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 80 95 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site YH65_01455 1dce8d5bf1b8e80a44546953cc373745 479 SUPERFAMILY SSF52540 17 231 3.34E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_00020 5640fa932350be9ad0c01975e9185d10 527 Gene3D G3DSA:3.90.1640.30 29 290 2.8E-82 T 11-10-2018 YH65_00020 5640fa932350be9ad0c01975e9185d10 527 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 24 523 6.0E-151 T 11-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 YH65_00020 5640fa932350be9ad0c01975e9185d10 527 Gene3D G3DSA:3.10.310.30 291 410 1.1E-30 T 11-10-2018 YH65_00020 5640fa932350be9ad0c01975e9185d10 527 Pfam PF01368 DHH family 53 178 5.1E-10 T 11-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 YH65_00020 5640fa932350be9ad0c01975e9185d10 527 SUPERFAMILY SSF64182 28 407 1.31E-99 T 11-10-2018 IPR038763 DHH phosphoesterase superfamily YH65_00020 5640fa932350be9ad0c01975e9185d10 527 Pfam PF02272 DHHA1 domain 289 404 1.1E-11 T 11-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 YH65_08015 89b8bffb6033ac0d0b638f10945acde7 175 Gene3D G3DSA:3.40.470.10 5 163 7.0E-49 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 YH65_08015 89b8bffb6033ac0d0b638f10945acde7 175 SMART SM00986 11 160 0.0031 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 YH65_08015 89b8bffb6033ac0d0b638f10945acde7 175 TIGRFAM TIGR04274 hypoxanDNAglyco: DNA-deoxyinosine glycosylase 10 154 3.6E-45 T 11-10-2018 IPR026353 Hypoxanthine-DNA glycosylase YH65_08015 89b8bffb6033ac0d0b638f10945acde7 175 Pfam PF03167 Uracil DNA glycosylase superfamily 16 152 8.5E-8 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 YH65_08015 89b8bffb6033ac0d0b638f10945acde7 175 SUPERFAMILY SSF52141 9 158 7.85E-30 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 YH65_08015 89b8bffb6033ac0d0b638f10945acde7 175 SMART SM00987 11 160 0.0031 T 11-10-2018 YH65_06295 81ddc4f6c426ae78b25ca3f8d5678f16 387 SUPERFAMILY SSF55874 245 385 4.19E-29 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YH65_06295 81ddc4f6c426ae78b25ca3f8d5678f16 387 Gene3D G3DSA:1.10.287.130 168 240 6.3E-9 T 11-10-2018 YH65_06295 81ddc4f6c426ae78b25ca3f8d5678f16 387 Gene3D G3DSA:3.30.565.10 244 387 7.7E-31 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YH65_06295 81ddc4f6c426ae78b25ca3f8d5678f16 387 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 289 384 2.2E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YH65_06295 81ddc4f6c426ae78b25ca3f8d5678f16 387 SMART SM00388 178 241 3.7E-6 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YH65_06295 81ddc4f6c426ae78b25ca3f8d5678f16 387 Pfam PF00512 His Kinase A (phospho-acceptor) domain 179 234 1.1E-8 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YH65_06295 81ddc4f6c426ae78b25ca3f8d5678f16 387 SUPERFAMILY SSF47384 169 235 3.34E-8 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 YH65_06295 81ddc4f6c426ae78b25ca3f8d5678f16 387 SMART SM00387 285 387 1.6E-16 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YH65_07040 b508b3ba7dfcb2b8062d3a3a13aaada9 107 SUPERFAMILY SSF143011 1 87 5.3E-7 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily YH65_07040 b508b3ba7dfcb2b8062d3a3a13aaada9 107 Gene3D G3DSA:3.30.2310.20 1 101 7.8E-13 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily YH65_04970 362bd1e5b4a6865d69df1c64cf163c5f 256 SUPERFAMILY SSF56219 6 255 1.27E-71 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily YH65_04970 362bd1e5b4a6865d69df1c64cf163c5f 256 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 6 254 1.8E-83 T 11-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 YH65_04970 362bd1e5b4a6865d69df1c64cf163c5f 256 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 8 247 3.7E-17 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase YH65_04970 362bd1e5b4a6865d69df1c64cf163c5f 256 Gene3D G3DSA:3.60.10.10 1 255 4.8E-82 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily YH65_04970 362bd1e5b4a6865d69df1c64cf163c5f 256 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 6 253 1.9E-83 T 11-10-2018 YH65_04090 9bda0f99b9246b616499d54b3bb663d6 126 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 2 104 9.2E-26 T 11-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 YH65_04090 9bda0f99b9246b616499d54b3bb663d6 126 SUPERFAMILY SSF54637 1 118 3.4E-29 T 11-10-2018 IPR029069 HotDog domain superfamily YH65_04090 9bda0f99b9246b616499d54b3bb663d6 126 Gene3D G3DSA:3.10.129.10 1 122 5.1E-32 T 11-10-2018 YH65_04090 9bda0f99b9246b616499d54b3bb663d6 126 Pfam PF03061 Thioesterase superfamily 13 94 9.7E-13 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 YH65_04090 9bda0f99b9246b616499d54b3bb663d6 126 PIRSF PIRSF003230 1 125 4.9E-32 T 11-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 YH65_00250 e06182bb054a7a8d1d8dddc64710bc54 146 Pfam PF01814 Hemerythrin HHE cation binding domain 5 125 4.2E-18 T 11-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 YH65_00250 e06182bb054a7a8d1d8dddc64710bc54 146 Gene3D G3DSA:1.20.120.520 3 146 2.0E-23 T 11-10-2018 YH65_08550 240260233e00eae6f866a9a3f9f9f7d0 293 SUPERFAMILY SSF52172 1 132 1.57E-16 T 11-10-2018 IPR011006 CheY-like superfamily YH65_08550 240260233e00eae6f866a9a3f9f9f7d0 293 Pfam PF00072 Response regulator receiver domain 3 104 2.3E-8 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YH65_08550 240260233e00eae6f866a9a3f9f9f7d0 293 Gene3D G3DSA:3.40.50.2300 1 116 2.1E-14 T 11-10-2018 YH65_08550 240260233e00eae6f866a9a3f9f9f7d0 293 SMART SM00448 1 104 3.3E-7 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YH65_01095 6ea3798b49e33d2c23397f331b9afd72 217 SUPERFAMILY SSF51306 91 214 1.05E-21 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily YH65_01095 6ea3798b49e33d2c23397f331b9afd72 217 Gene3D G3DSA:2.10.109.10 94 217 6.0E-15 T 11-10-2018 YH65_01095 6ea3798b49e33d2c23397f331b9afd72 217 Pfam PF00717 Peptidase S24-like 133 198 1.1E-12 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C YH65_01095 6ea3798b49e33d2c23397f331b9afd72 217 Gene3D G3DSA:1.10.260.40 2 76 1.3E-11 T 11-10-2018 YH65_01095 6ea3798b49e33d2c23397f331b9afd72 217 Pfam PF07022 Bacteriophage CI repressor helix-turn-helix domain 26 70 8.8E-6 T 11-10-2018 IPR010744 Bacteriophage CI repressor GO:0003677|GO:0045892 YH65_01095 6ea3798b49e33d2c23397f331b9afd72 217 ProSitePatterns PS00501 Signal peptidases I serine active site. 136 143 - T 11-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 YH65_07790 a66b13bd9a6ff8a4e25ac986df0f6b10 629 Gene3D G3DSA:2.70.150.20 120 231 1.5E-37 T 11-10-2018 YH65_07790 a66b13bd9a6ff8a4e25ac986df0f6b10 629 PRINTS PR00941 Cadmium-transporting ATPase signature 192 208 1.5E-18 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 YH65_07790 a66b13bd9a6ff8a4e25ac986df0f6b10 629 PRINTS PR00941 Cadmium-transporting ATPase signature 111 131 1.5E-18 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 YH65_07790 a66b13bd9a6ff8a4e25ac986df0f6b10 629 PRINTS PR00941 Cadmium-transporting ATPase signature 131 147 1.5E-18 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 YH65_07790 a66b13bd9a6ff8a4e25ac986df0f6b10 629 PRINTS PR00941 Cadmium-transporting ATPase signature 56 68 1.5E-18 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 YH65_07790 a66b13bd9a6ff8a4e25ac986df0f6b10 629 PRINTS PR00941 Cadmium-transporting ATPase signature 211 225 1.5E-18 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 YH65_07790 a66b13bd9a6ff8a4e25ac986df0f6b10 629 PRINTS PR00941 Cadmium-transporting ATPase signature 39 56 1.5E-18 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 YH65_07790 a66b13bd9a6ff8a4e25ac986df0f6b10 629 SUPERFAMILY SSF81665 78 595 2.35E-16 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 YH65_07790 a66b13bd9a6ff8a4e25ac986df0f6b10 629 Pfam PF00122 E1-E2 ATPase 127 306 9.8E-51 T 11-10-2018 YH65_07790 a66b13bd9a6ff8a4e25ac986df0f6b10 629 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 105 606 1.1E-85 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 YH65_07790 a66b13bd9a6ff8a4e25ac986df0f6b10 629 Pfam PF00702 haloacid dehalogenase-like hydrolase 322 536 5.3E-46 T 11-10-2018 YH65_07790 a66b13bd9a6ff8a4e25ac986df0f6b10 629 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 328 334 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 YH65_07790 a66b13bd9a6ff8a4e25ac986df0f6b10 629 Gene3D G3DSA:3.40.1110.10 337 456 1.9E-90 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 YH65_07790 a66b13bd9a6ff8a4e25ac986df0f6b10 629 SUPERFAMILY SSF56784 324 623 3.4E-55 T 11-10-2018 IPR036412 HAD-like superfamily YH65_07790 a66b13bd9a6ff8a4e25ac986df0f6b10 629 Gene3D G3DSA:3.40.50.1000 307 575 1.9E-90 T 11-10-2018 IPR023214 HAD superfamily YH65_07790 a66b13bd9a6ff8a4e25ac986df0f6b10 629 SUPERFAMILY SSF81653 129 226 6.28E-23 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 YH65_07790 a66b13bd9a6ff8a4e25ac986df0f6b10 629 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 326 340 4.3E-28 T 11-10-2018 YH65_07790 a66b13bd9a6ff8a4e25ac986df0f6b10 629 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 449 460 4.3E-28 T 11-10-2018 YH65_07790 a66b13bd9a6ff8a4e25ac986df0f6b10 629 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 523 542 4.3E-28 T 11-10-2018 YH65_07790 a66b13bd9a6ff8a4e25ac986df0f6b10 629 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 547 559 4.3E-28 T 11-10-2018 YH65_07790 a66b13bd9a6ff8a4e25ac986df0f6b10 629 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 471 481 4.3E-28 T 11-10-2018 YH65_07790 a66b13bd9a6ff8a4e25ac986df0f6b10 629 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 176 190 4.3E-28 T 11-10-2018 YH65_07790 a66b13bd9a6ff8a4e25ac986df0f6b10 629 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 77 625 1.8E-179 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 YH65_08070 ed153f466e3fd474d65c0ba1847ab877 216 Pfam PF08534 Redoxin 79 169 3.5E-12 T 11-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 YH65_08070 ed153f466e3fd474d65c0ba1847ab877 216 SUPERFAMILY SSF52833 83 213 2.12E-22 T 11-10-2018 IPR036249 Thioredoxin-like superfamily YH65_08070 ed153f466e3fd474d65c0ba1847ab877 216 ProSitePatterns PS00194 Thioredoxin family active site. 98 116 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 YH65_08070 ed153f466e3fd474d65c0ba1847ab877 216 Gene3D G3DSA:3.40.30.10 30 216 1.3E-23 T 11-10-2018 YH65_03305 a645dd421699d98294d879f00c58bbd9 244 SUPERFAMILY SSF53167 4 239 5.63E-64 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 YH65_03305 a645dd421699d98294d879f00c58bbd9 244 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 4 239 3.1E-47 T 11-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 YH65_03305 a645dd421699d98294d879f00c58bbd9 244 Gene3D G3DSA:3.40.50.1580 1 244 3.2E-66 T 11-10-2018 YH65_03305 a645dd421699d98294d879f00c58bbd9 244 Pfam PF01048 Phosphorylase superfamily 4 236 1.0E-46 T 11-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 YH65_03920 830ce2f7db9e9a4764a81b14c11c45b1 312 Gene3D G3DSA:2.40.30.170 158 231 2.6E-24 T 11-10-2018 YH65_03920 830ce2f7db9e9a4764a81b14c11c45b1 312 Gene3D G3DSA:2.40.420.20 232 312 1.2E-13 T 11-10-2018 YH65_03920 830ce2f7db9e9a4764a81b14c11c45b1 312 SUPERFAMILY SSF111369 33 232 8.76E-13 T 11-10-2018 YH65_03920 830ce2f7db9e9a4764a81b14c11c45b1 312 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 24 229 8.4E-54 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YH65_03920 830ce2f7db9e9a4764a81b14c11c45b1 312 Gene3D G3DSA:1.10.287.470 97 107 2.6E-24 T 11-10-2018 YH65_03920 830ce2f7db9e9a4764a81b14c11c45b1 312 Gene3D G3DSA:2.40.50.100 108 157 2.6E-24 T 11-10-2018 YH65_07535 13416334d21d5859e4a98b07429ee0f7 381 SUPERFAMILY SSF51905 1 374 2.75E-40 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_07535 13416334d21d5859e4a98b07429ee0f7 381 SUPERFAMILY SSF160996 183 322 4.05E-26 T 11-10-2018 YH65_07535 13416334d21d5859e4a98b07429ee0f7 381 Pfam PF03486 HI0933-like protein 4 374 3.1E-99 T 11-10-2018 YH65_07535 13416334d21d5859e4a98b07429ee0f7 381 Gene3D G3DSA:1.10.8.260 253 304 6.1E-103 T 11-10-2018 IPR023166 HI0933-like insert domain superfamily YH65_07535 13416334d21d5859e4a98b07429ee0f7 381 Gene3D G3DSA:2.40.30.10 182 321 6.1E-103 T 11-10-2018 YH65_07535 13416334d21d5859e4a98b07429ee0f7 381 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 5 373 1.4E-99 T 11-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like YH65_07535 13416334d21d5859e4a98b07429ee0f7 381 Gene3D G3DSA:3.50.50.60 6 369 6.1E-103 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_08955 cd17ffab27b56f231b2243b5c687ad73 162 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 78 4.6E-20 T 11-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 YH65_08955 cd17ffab27b56f231b2243b5c687ad73 162 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 2.4E-13 T 11-10-2018 YH65_08955 cd17ffab27b56f231b2243b5c687ad73 162 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 2.4E-13 T 11-10-2018 YH65_08955 cd17ffab27b56f231b2243b5c687ad73 162 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 2.4E-13 T 11-10-2018 YH65_08955 cd17ffab27b56f231b2243b5c687ad73 162 Pfam PF02416 mttA/Hcf106 family 4 46 6.8E-5 T 11-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 YH65_08955 cd17ffab27b56f231b2243b5c687ad73 162 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 159 15.1 T 11-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 YH65_03820 3c467baf5cab07895ba5a4eb396abf05 247 Pfam PF00929 Exonuclease 3 149 3.1E-11 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III YH65_03820 3c467baf5cab07895ba5a4eb396abf05 247 Gene3D G3DSA:3.30.420.10 1 163 2.4E-17 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 YH65_03820 3c467baf5cab07895ba5a4eb396abf05 247 SMART SM00479 1 164 0.0052 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III YH65_03820 3c467baf5cab07895ba5a4eb396abf05 247 SUPERFAMILY SSF53098 3 189 2.34E-19 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily YH65_05260 bad64e0274bc89b4e28f02cd2ee3a140 481 SUPERFAMILY SSF101960 36 478 1.22E-135 T 11-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily YH65_05260 bad64e0274bc89b4e28f02cd2ee3a140 481 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 15 472 5.3E-191 T 11-10-2018 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 YH65_05260 bad64e0274bc89b4e28f02cd2ee3a140 481 Pfam PF01458 Uncharacterized protein family (UPF0051) 219 452 1.2E-66 T 11-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 YH65_08870 5d8979c676c56636a1abda549a0ee5d8 468 Pfam PF04715 Anthranilate synthase component I, N terminal region 8 159 2.0E-21 T 11-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 YH65_08870 5d8979c676c56636a1abda549a0ee5d8 468 PRINTS PR00095 Anthranilate synthase component I signature 396 410 1.2E-23 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 YH65_08870 5d8979c676c56636a1abda549a0ee5d8 468 PRINTS PR00095 Anthranilate synthase component I signature 302 315 1.2E-23 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 YH65_08870 5d8979c676c56636a1abda549a0ee5d8 468 PRINTS PR00095 Anthranilate synthase component I signature 316 329 1.2E-23 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 YH65_08870 5d8979c676c56636a1abda549a0ee5d8 468 PRINTS PR00095 Anthranilate synthase component I signature 411 425 1.2E-23 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 YH65_08870 5d8979c676c56636a1abda549a0ee5d8 468 Pfam PF00425 chorismate binding enzyme 201 454 1.6E-88 T 11-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal YH65_08870 5d8979c676c56636a1abda549a0ee5d8 468 SUPERFAMILY SSF56322 4 463 4.45E-129 T 11-10-2018 IPR005801 ADC synthase GO:0009058 YH65_08870 5d8979c676c56636a1abda549a0ee5d8 468 Gene3D G3DSA:3.60.120.10 1 468 4.0E-144 T 11-10-2018 IPR005801 ADC synthase GO:0009058 YH65_02005 3d00ab6dd1f3e04540c1944a1f8c4388 315 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 35 165 8.1E-66 T 11-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 YH65_02005 3d00ab6dd1f3e04540c1944a1f8c4388 315 SUPERFAMILY SSF52540 5 288 2.7E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_02005 3d00ab6dd1f3e04540c1944a1f8c4388 315 PIRSF PIRSF002849 1 315 2.4E-133 T 11-10-2018 YH65_02005 3d00ab6dd1f3e04540c1944a1f8c4388 315 Gene3D G3DSA:3.40.50.300 16 182 8.2E-48 T 11-10-2018 YH65_02005 3d00ab6dd1f3e04540c1944a1f8c4388 315 Gene3D G3DSA:1.10.8.300 195 312 8.8E-37 T 11-10-2018 YH65_07260 b405dc55d066033540badf054dd6e5ae 252 TIGRFAM TIGR02757 TIGR02757: TIGR02757 family protein 27 248 2.8E-73 T 11-10-2018 IPR014127 Conserved hypothetical protein CHP02757 YH65_07260 b405dc55d066033540badf054dd6e5ae 252 Pfam PF09674 Protein of unknown function (DUF2400) 29 247 8.0E-66 T 11-10-2018 IPR014127 Conserved hypothetical protein CHP02757 YH65_07260 b405dc55d066033540badf054dd6e5ae 252 SUPERFAMILY SSF48150 190 247 5.02E-5 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 YH65_09770 dcd5a1acf9b6f9c3b927c0049538d9ab 305 Pfam PF02885 Glycosyl transferase family, helical bundle domain 9 68 1.2E-11 T 11-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 YH65_09770 dcd5a1acf9b6f9c3b927c0049538d9ab 305 SUPERFAMILY SSF52418 84 302 4.84E-28 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 YH65_09770 dcd5a1acf9b6f9c3b927c0049538d9ab 305 SUPERFAMILY SSF47648 14 73 2.22E-12 T 11-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 YH65_09770 dcd5a1acf9b6f9c3b927c0049538d9ab 305 Gene3D G3DSA:1.20.970.10 5 74 9.7E-14 T 11-10-2018 YH65_09770 dcd5a1acf9b6f9c3b927c0049538d9ab 305 Pfam PF00591 Glycosyl transferase family, a/b domain 141 303 2.6E-9 T 11-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 YH65_09770 dcd5a1acf9b6f9c3b927c0049538d9ab 305 Gene3D G3DSA:3.40.1030.10 127 304 1.7E-24 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 YH65_02890 5e26b4e530088cefdc863bd9bfd8fc8c 229 Pfam PF01255 Putative undecaprenyl diphosphate synthase 12 226 1.4E-75 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 YH65_02890 5e26b4e530088cefdc863bd9bfd8fc8c 229 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 172 189 - T 11-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 YH65_02890 5e26b4e530088cefdc863bd9bfd8fc8c 229 Gene3D G3DSA:3.40.1180.10 2 227 1.4E-83 T 11-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 YH65_02890 5e26b4e530088cefdc863bd9bfd8fc8c 229 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 7 226 3.0E-81 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 YH65_02890 5e26b4e530088cefdc863bd9bfd8fc8c 229 SUPERFAMILY SSF64005 7 221 1.28E-70 T 11-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 YH65_02890 5e26b4e530088cefdc863bd9bfd8fc8c 229 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 5 227 36.958 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 YH65_07455 12517fa92a276f0221a42ac5dbdb67ae 540 Gene3D G3DSA:3.90.780.10 327 540 6.3E-35 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 YH65_07455 12517fa92a276f0221a42ac5dbdb67ae 540 PRINTS PR01607 Apyrase family signature 262 282 3.6E-19 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 YH65_07455 12517fa92a276f0221a42ac5dbdb67ae 540 PRINTS PR01607 Apyrase family signature 473 492 3.6E-19 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 YH65_07455 12517fa92a276f0221a42ac5dbdb67ae 540 PRINTS PR01607 Apyrase family signature 35 53 3.6E-19 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 YH65_07455 12517fa92a276f0221a42ac5dbdb67ae 540 PRINTS PR01607 Apyrase family signature 381 404 3.6E-19 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 YH65_07455 12517fa92a276f0221a42ac5dbdb67ae 540 PRINTS PR01607 Apyrase family signature 234 257 3.6E-19 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 YH65_07455 12517fa92a276f0221a42ac5dbdb67ae 540 PRINTS PR01607 Apyrase family signature 215 232 3.6E-19 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 YH65_07455 12517fa92a276f0221a42ac5dbdb67ae 540 Pfam PF00149 Calcineurin-like phosphoesterase 38 251 2.3E-9 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 YH65_07455 12517fa92a276f0221a42ac5dbdb67ae 540 SUPERFAMILY SSF55816 325 538 2.62E-37 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 YH65_07455 12517fa92a276f0221a42ac5dbdb67ae 540 Pfam PF02872 5'-nucleotidase, C-terminal domain 326 500 5.4E-39 T 11-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 YH65_07455 12517fa92a276f0221a42ac5dbdb67ae 540 SUPERFAMILY SSF56300 36 320 1.72E-60 T 11-10-2018 YH65_07455 12517fa92a276f0221a42ac5dbdb67ae 540 Gene3D G3DSA:3.60.21.10 27 326 1.1E-65 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like YH65_05460 1f3c61c475c56eecfaf23c15a2fd50ba 557 Pfam PF01434 Peptidase family M41 385 506 2.3E-8 T 11-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 YH65_05460 1f3c61c475c56eecfaf23c15a2fd50ba 557 Gene3D G3DSA:3.40.50.300 146 326 5.8E-64 T 11-10-2018 YH65_05460 1f3c61c475c56eecfaf23c15a2fd50ba 557 SUPERFAMILY SSF52540 154 393 1.3E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_05460 1f3c61c475c56eecfaf23c15a2fd50ba 557 SUPERFAMILY SSF140990 404 554 8.76E-20 T 11-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 YH65_05460 1f3c61c475c56eecfaf23c15a2fd50ba 557 Gene3D G3DSA:1.20.58.760 404 556 5.8E-12 T 11-10-2018 YH65_05460 1f3c61c475c56eecfaf23c15a2fd50ba 557 ProSitePatterns PS00674 AAA-protein family signature. 295 313 - T 11-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 YH65_05460 1f3c61c475c56eecfaf23c15a2fd50ba 557 SMART SM00382 191 327 2.5E-22 T 11-10-2018 IPR003593 AAA+ ATPase domain YH65_05460 1f3c61c475c56eecfaf23c15a2fd50ba 557 Gene3D G3DSA:1.10.8.60 327 400 3.1E-15 T 11-10-2018 YH65_05460 1f3c61c475c56eecfaf23c15a2fd50ba 557 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 195 324 5.1E-43 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 YH65_08435 a6f67ace1d78ad0707bbd0d07e4841e1 607 Gene3D G3DSA:1.10.580.10 370 578 2.0E-15 T 11-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 YH65_08435 a6f67ace1d78ad0707bbd0d07e4841e1 607 SUPERFAMILY SSF51735 6 137 2.32E-12 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily YH65_08435 a6f67ace1d78ad0707bbd0d07e4841e1 607 Pfam PF00549 CoA-ligase 175 297 2.1E-11 T 11-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 YH65_08435 a6f67ace1d78ad0707bbd0d07e4841e1 607 Pfam PF00285 Citrate synthase, C-terminal domain 368 582 3.3E-16 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 YH65_08435 a6f67ace1d78ad0707bbd0d07e4841e1 607 Gene3D G3DSA:1.10.230.10 443 546 2.0E-15 T 11-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain YH65_08435 a6f67ace1d78ad0707bbd0d07e4841e1 607 PRINTS PR01798 Succinyl-CoA synthase signature 200 218 1.1E-5 T 11-10-2018 YH65_08435 a6f67ace1d78ad0707bbd0d07e4841e1 607 PRINTS PR01798 Succinyl-CoA synthase signature 231 244 1.1E-5 T 11-10-2018 YH65_08435 a6f67ace1d78ad0707bbd0d07e4841e1 607 PRINTS PR01798 Succinyl-CoA synthase signature 267 284 1.1E-5 T 11-10-2018 YH65_08435 a6f67ace1d78ad0707bbd0d07e4841e1 607 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 260 276 - T 11-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site YH65_08435 a6f67ace1d78ad0707bbd0d07e4841e1 607 SUPERFAMILY SSF48256 135 605 5.5E-67 T 11-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 YH65_08435 a6f67ace1d78ad0707bbd0d07e4841e1 607 Gene3D G3DSA:3.40.50.261 139 334 4.3E-56 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 YH65_08435 a6f67ace1d78ad0707bbd0d07e4841e1 607 Gene3D G3DSA:3.40.50.720 1 138 1.2E-48 T 11-10-2018 YH65_05305 312cb49208eaca44f33a66033f0eba50 65 Pfam PF13396 Phospholipase_D-nuclease N-terminal 18 61 1.8E-12 T 11-10-2018 IPR027379 Cardiolipin synthase N-terminal YH65_04520 d21b20f9caa1b411c2c6f8b50b7600f0 387 Pfam PF03553 Na+/H+ antiporter family 87 384 1.9E-59 T 11-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 YH65_00660 aa58e80ce448f223ae723b1d7ce81047 352 Pfam PF00953 Glycosyl transferase family 4 93 276 4.3E-38 T 11-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 YH65_00660 aa58e80ce448f223ae723b1d7ce81047 352 ProSitePatterns PS01348 MraY family signature 2. 181 192 - T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 YH65_00660 aa58e80ce448f223ae723b1d7ce81047 352 ProSitePatterns PS01347 MraY family signature 1. 62 74 - T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 YH65_00660 aa58e80ce448f223ae723b1d7ce81047 352 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 62 74 1.3E-4 T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 YH65_00660 aa58e80ce448f223ae723b1d7ce81047 352 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 33 352 1.8E-115 T 11-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 YH65_00660 aa58e80ce448f223ae723b1d7ce81047 352 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 20 350 22.452 T 11-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 YH65_08265 87923cc39c3c036194002043e1b39a4d 391 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 388 42.539 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 YH65_08265 87923cc39c3c036194002043e1b39a4d 391 Gene3D G3DSA:3.30.470.20 2 235 5.5E-92 T 11-10-2018 YH65_08265 87923cc39c3c036194002043e1b39a4d 391 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 258 282 - T 11-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 YH65_08265 87923cc39c3c036194002043e1b39a4d 391 Pfam PF00549 CoA-ligase 263 368 4.2E-19 T 11-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 YH65_08265 87923cc39c3c036194002043e1b39a4d 391 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 2 387 4.3E-149 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 YH65_08265 87923cc39c3c036194002043e1b39a4d 391 Gene3D G3DSA:3.40.50.261 241 390 9.2E-52 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 YH65_08265 87923cc39c3c036194002043e1b39a4d 391 SUPERFAMILY SSF56059 2 239 4.65E-80 T 11-10-2018 YH65_08265 87923cc39c3c036194002043e1b39a4d 391 PIRSF PIRSF001554 1 390 2.3E-148 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 YH65_08265 87923cc39c3c036194002043e1b39a4d 391 Pfam PF08442 ATP-grasp domain 2 203 1.5E-76 T 11-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 YH65_08265 87923cc39c3c036194002043e1b39a4d 391 Gene3D G3DSA:3.30.1490.20 21 104 5.5E-92 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 YH65_08265 87923cc39c3c036194002043e1b39a4d 391 SUPERFAMILY SSF52210 240 387 1.24E-47 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 YH65_06040 1ccd78ca7335886dc7be796c9d902b89 275 SUPERFAMILY SSF111321 1 273 9.55E-77 T 11-10-2018 IPR036075 AF1104-like superfamily YH65_06040 1ccd78ca7335886dc7be796c9d902b89 275 PIRSF PIRSF006593 1 275 2.2E-75 T 11-10-2018 IPR014444 Uncharacterised conserved protein UCP006593 YH65_06040 1ccd78ca7335886dc7be796c9d902b89 275 Pfam PF01937 Protein of unknown function DUF89 5 269 3.2E-40 T 11-10-2018 IPR002791 Domain of unknown function DUF89 YH65_06040 1ccd78ca7335886dc7be796c9d902b89 275 Gene3D G3DSA:1.10.285.20 68 126 6.9E-7 T 11-10-2018 YH65_06040 1ccd78ca7335886dc7be796c9d902b89 275 Gene3D G3DSA:3.40.50.10880 128 275 6.7E-48 T 11-10-2018 YH65_09545 5cffba50caca28363211813f9cd1afe2 178 Gene3D G3DSA:3.30.70.20 107 167 1.2E-9 T 11-10-2018 YH65_09545 5cffba50caca28363211813f9cd1afe2 178 Pfam PF00037 4Fe-4S binding domain 140 163 1.4E-8 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YH65_09545 5cffba50caca28363211813f9cd1afe2 178 Gene3D G3DSA:3.30.70.20 36 106 1.2E-8 T 11-10-2018 YH65_09545 5cffba50caca28363211813f9cd1afe2 178 SUPERFAMILY SSF46548 36 166 9.94E-18 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 YH65_09545 5cffba50caca28363211813f9cd1afe2 178 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 147 158 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YH65_08575 da0f0915a1e97419fee1e4113423cd36 426 SUPERFAMILY SSF51735 160 416 4.42E-83 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily YH65_08575 da0f0915a1e97419fee1e4113423cd36 426 Pfam PF03949 Malic enzyme, NAD binding domain 162 350 2.8E-24 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 YH65_08575 da0f0915a1e97419fee1e4113423cd36 426 PIRSF PIRSF000106 35 419 4.9E-75 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 YH65_08575 da0f0915a1e97419fee1e4113423cd36 426 SUPERFAMILY SSF53223 9 158 3.6E-52 T 11-10-2018 YH65_08575 da0f0915a1e97419fee1e4113423cd36 426 Gene3D G3DSA:3.40.50.720 158 419 2.7E-85 T 11-10-2018 YH65_08575 da0f0915a1e97419fee1e4113423cd36 426 Pfam PF00390 Malic enzyme, N-terminal domain 19 148 7.6E-27 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 YH65_08575 da0f0915a1e97419fee1e4113423cd36 426 ProSitePatterns PS00331 Malic enzymes signature. 156 172 - T 11-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 YH65_08575 da0f0915a1e97419fee1e4113423cd36 426 SMART SM00919 160 394 1.7E-137 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 YH65_08575 da0f0915a1e97419fee1e4113423cd36 426 Gene3D G3DSA:3.40.50.10380 4 157 4.5E-69 T 11-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 YH65_08575 da0f0915a1e97419fee1e4113423cd36 426 SMART SM01274 15 148 5.6E-79 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 YH65_05050 c42aa5d0e24a87058b855fc500dec7ba 153 PIRSF PIRSF005384 3 147 3.8E-57 T 11-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 YH65_05050 c42aa5d0e24a87058b855fc500dec7ba 153 Pfam PF02502 Ribose/Galactose Isomerase 6 142 8.7E-55 T 11-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 YH65_05050 c42aa5d0e24a87058b855fc500dec7ba 153 SUPERFAMILY SSF89623 3 144 1.96E-56 T 11-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 YH65_05050 c42aa5d0e24a87058b855fc500dec7ba 153 Gene3D G3DSA:3.40.1400.10 1 145 6.4E-59 T 11-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 YH65_05050 c42aa5d0e24a87058b855fc500dec7ba 153 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 6 143 3.3E-59 T 11-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 YH65_05050 c42aa5d0e24a87058b855fc500dec7ba 153 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 5 144 1.4E-56 T 11-10-2018 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 YH65_10925 811ec529b669df134a18777dc0a3a0a0 361 Gene3D G3DSA:1.20.58.1130 45 250 2.0E-14 T 11-10-2018 YH65_10925 811ec529b669df134a18777dc0a3a0a0 361 Gene3D G3DSA:1.20.1420.30 68 352 2.0E-14 T 11-10-2018 YH65_10925 811ec529b669df134a18777dc0a3a0a0 361 Pfam PF01699 Sodium/calcium exchanger protein 222 360 4.0E-12 T 11-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 YH65_10925 811ec529b669df134a18777dc0a3a0a0 361 Pfam PF01699 Sodium/calcium exchanger protein 39 186 1.1E-19 T 11-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 YH65_07625 d202afa9bf4587bd1d67af95c0dcaa3d 399 SUPERFAMILY SSF56935 32 288 1.86E-6 T 11-10-2018 YH65_07625 d202afa9bf4587bd1d67af95c0dcaa3d 399 Gene3D G3DSA:2.40.160.10 35 399 1.3E-11 T 11-10-2018 IPR023614 Porin domain superfamily YH65_02090 8346f49ee0f5b91719ba708829db1fb8 109 SMART SM00905 3 104 1.3E-17 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 YH65_02090 8346f49ee0f5b91719ba708829db1fb8 109 TIGRFAM TIGR00526 folB_dom: FolB domain 2 94 1.8E-13 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 YH65_02090 8346f49ee0f5b91719ba708829db1fb8 109 Pfam PF02152 Dihydroneopterin aldolase 3 95 3.4E-16 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 YH65_02090 8346f49ee0f5b91719ba708829db1fb8 109 Gene3D G3DSA:3.30.1130.10 1 103 1.4E-14 T 11-10-2018 YH65_02090 8346f49ee0f5b91719ba708829db1fb8 109 SUPERFAMILY SSF55620 2 97 6.12E-18 T 11-10-2018 YH65_04360 4b1ac892a833d3568d9a98837c6226ed 160 Pfam PF03737 Aldolase/RraA 5 152 1.3E-33 T 11-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein YH65_04360 4b1ac892a833d3568d9a98837c6226ed 160 Gene3D G3DSA:3.50.30.40 1 159 2.7E-49 T 11-10-2018 YH65_04360 4b1ac892a833d3568d9a98837c6226ed 160 SUPERFAMILY SSF89562 3 157 2.09E-35 T 11-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily YH65_04360 4b1ac892a833d3568d9a98837c6226ed 160 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 152 5.6E-44 T 11-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 YH65_02715 32c7f4d2c84670f596063a2ce3cf5d8e 189 Pfam PF02132 RecR protein 42 80 1.5E-15 T 11-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger YH65_02715 32c7f4d2c84670f596063a2ce3cf5d8e 189 SUPERFAMILY SSF111304 6 189 5.75E-55 T 11-10-2018 IPR023627 Recombination protein RecR YH65_02715 32c7f4d2c84670f596063a2ce3cf5d8e 189 TIGRFAM TIGR00615 recR: recombination protein RecR 7 186 1.4E-50 T 11-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 YH65_02715 32c7f4d2c84670f596063a2ce3cf5d8e 189 ProSitePatterns PS01300 RecR protein signature. 59 80 - T 11-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 YH65_02715 32c7f4d2c84670f596063a2ce3cf5d8e 189 Gene3D G3DSA:3.40.1360.10 79 189 1.3E-22 T 11-10-2018 YH65_02715 32c7f4d2c84670f596063a2ce3cf5d8e 189 Hamap MF_00017 Recombination protein RecR [recR]. 1 189 57.354 T 11-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 YH65_02715 32c7f4d2c84670f596063a2ce3cf5d8e 189 Gene3D G3DSA:1.10.8.420 5 54 6.9E-9 T 11-10-2018 YH65_02715 32c7f4d2c84670f596063a2ce3cf5d8e 189 Pfam PF13662 Toprim domain 83 161 4.7E-5 T 11-10-2018 IPR006171 TOPRIM domain YH65_10600 aa4a0687113f8d3015aa8ffea0153a14 63 Gene3D G3DSA:1.10.287.310 1 63 3.5E-15 T 11-10-2018 YH65_10600 aa4a0687113f8d3015aa8ffea0153a14 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 15.13 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_10600 aa4a0687113f8d3015aa8ffea0153a14 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 58 1.2E-17 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_10600 aa4a0687113f8d3015aa8ffea0153a14 63 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 11-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_10600 aa4a0687113f8d3015aa8ffea0153a14 63 SUPERFAMILY SSF46561 1 59 6.02E-15 T 11-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_10600 aa4a0687113f8d3015aa8ffea0153a14 63 Pfam PF00831 Ribosomal L29 protein 5 58 1.7E-16 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_01055 642cebe61eb4adad3d2fa17772ab1ffc 703 Gene3D G3DSA:3.40.1380.40 422 574 2.2E-52 T 11-10-2018 YH65_01055 642cebe61eb4adad3d2fa17772ab1ffc 703 Pfam PF02516 Oligosaccharyl transferase STT3 subunit 34 476 5.0E-38 T 11-10-2018 IPR003674 Oligosaccharyl transferase, STT3 subunit GO:0004576|GO:0006486|GO:0016020 YH65_06225 fd5668bd7b8e55ab57e8a74eb6848060 581 Pfam PF00501 AMP-binding enzyme 18 451 2.2E-80 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 YH65_06225 fd5668bd7b8e55ab57e8a74eb6848060 581 ProSitePatterns PS00455 Putative AMP-binding domain signature. 175 186 - T 11-10-2018 IPR020845 AMP-binding, conserved site YH65_06225 fd5668bd7b8e55ab57e8a74eb6848060 581 SUPERFAMILY SSF56801 11 578 3.66E-96 T 11-10-2018 YH65_10615 56cd819cd1e837fcbc4ead85ba615325 77 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 5 76 15.649 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_10615 56cd819cd1e837fcbc4ead85ba615325 77 Pfam PF00467 KOW motif 9 39 5.7E-9 T 11-10-2018 IPR005824 KOW YH65_10615 56cd819cd1e837fcbc4ead85ba615325 77 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 5 76 6.8E-27 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_10615 56cd819cd1e837fcbc4ead85ba615325 77 ProSitePatterns PS01108 Ribosomal protein L24 signature. 10 27 - T 11-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YH65_10615 56cd819cd1e837fcbc4ead85ba615325 77 SMART SM00739 6 33 7.2E-8 T 11-10-2018 IPR005824 KOW YH65_10615 56cd819cd1e837fcbc4ead85ba615325 77 Gene3D G3DSA:2.30.30.1090 1 72 3.4E-30 T 11-10-2018 YH65_10615 56cd819cd1e837fcbc4ead85ba615325 77 SUPERFAMILY SSF50104 4 75 3.72E-26 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily YH65_10615 56cd819cd1e837fcbc4ead85ba615325 77 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 42 75 5.9E-9 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_00565 83923da53a0ad86c2252ef426983a17e 75 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 73 22.367 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 YH65_00565 83923da53a0ad86c2252ef426983a17e 75 Pfam PF02416 mttA/Hcf106 family 5 53 1.6E-20 T 11-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 YH65_00565 83923da53a0ad86c2252ef426983a17e 75 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 49 1.0E-21 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 YH65_07300 f6f70b643d284db93ba78df80d6b7020 277 Gene3D G3DSA:3.40.50.1980 133 270 2.6E-18 T 11-10-2018 YH65_07300 f6f70b643d284db93ba78df80d6b7020 277 Gene3D G3DSA:3.40.50.1980 16 132 2.7E-30 T 11-10-2018 YH65_07300 f6f70b643d284db93ba78df80d6b7020 277 SUPERFAMILY SSF53807 18 268 1.22E-47 T 11-10-2018 YH65_07300 f6f70b643d284db93ba78df80d6b7020 277 Pfam PF01497 Periplasmic binding protein 20 248 2.1E-30 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain YH65_01945 32ba53194ac2770599d2b68e42239e99 664 Gene3D G3DSA:1.10.8.60 7 236 2.0E-99 T 11-10-2018 YH65_01945 32ba53194ac2770599d2b68e42239e99 664 Gene3D G3DSA:3.40.50.300 12 176 2.0E-99 T 11-10-2018 YH65_01945 32ba53194ac2770599d2b68e42239e99 664 Pfam PF13177 DNA polymerase III, delta subunit 19 177 3.1E-45 T 11-10-2018 YH65_01945 32ba53194ac2770599d2b68e42239e99 664 SUPERFAMILY SSF52540 33 224 1.41E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_01945 32ba53194ac2770599d2b68e42239e99 664 SMART SM00382 36 178 4.3E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain YH65_01945 32ba53194ac2770599d2b68e42239e99 664 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 4 295 6.3E-121 T 11-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 YH65_10410 f62fc91dfec602ea65f376bab3deee9a 374 Pfam PF00753 Metallo-beta-lactamase superfamily 86 268 4.1E-15 T 11-10-2018 IPR001279 Metallo-beta-lactamase YH65_10410 f62fc91dfec602ea65f376bab3deee9a 374 SMART SM00849 86 279 4.5E-14 T 11-10-2018 IPR001279 Metallo-beta-lactamase YH65_10410 f62fc91dfec602ea65f376bab3deee9a 374 SUPERFAMILY SSF56281 8 332 1.18E-53 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like YH65_10410 f62fc91dfec602ea65f376bab3deee9a 374 Gene3D G3DSA:3.60.15.10 59 305 3.6E-37 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like YH65_02145 531d5cdc0338680ea5f3403f4d76e8a8 129 Gene3D G3DSA:3.30.300.20 3 119 1.5E-18 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta YH65_02145 531d5cdc0338680ea5f3403f4d76e8a8 129 Pfam PF02033 Ribosome-binding factor A 8 110 1.1E-14 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 YH65_02145 531d5cdc0338680ea5f3403f4d76e8a8 129 ProSitePatterns PS01319 Ribosome-binding factor A signature. 76 97 - T 11-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 YH65_02145 531d5cdc0338680ea5f3403f4d76e8a8 129 SUPERFAMILY SSF89919 2 104 8.5E-16 T 11-10-2018 IPR023799 Ribosome-binding factor A domain superfamily YH65_02145 531d5cdc0338680ea5f3403f4d76e8a8 129 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 6 110 18.555 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 YH65_02145 531d5cdc0338680ea5f3403f4d76e8a8 129 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 26 97 4.0E-4 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 YH65_02145 531d5cdc0338680ea5f3403f4d76e8a8 129 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 115 5.0E-20 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 YH65_06925 b7ad7a4745d361f9bc6294308e6a1f80 191 Gene3D G3DSA:3.40.50.10610 16 191 7.0E-25 T 11-10-2018 YH65_06925 b7ad7a4745d361f9bc6294308e6a1f80 191 SUPERFAMILY SSF159594 24 190 4.45E-29 T 11-10-2018 YH65_06925 b7ad7a4745d361f9bc6294308e6a1f80 191 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 26 185 5.1E-11 T 11-10-2018 IPR005586 ABC-type transport auxiliary lipoprotein component YH65_06920 011ac619ca4fb2170b34a4abce8acbb5 403 SUPERFAMILY SSF52954 326 403 3.27E-13 T 11-10-2018 YH65_06920 011ac619ca4fb2170b34a4abce8acbb5 403 PIRSF PIRSF001549 1 403 2.1E-113 T 11-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 YH65_06920 011ac619ca4fb2170b34a4abce8acbb5 403 Gene3D G3DSA:3.40.50.800 323 403 1.7E-14 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily YH65_06920 011ac619ca4fb2170b34a4abce8acbb5 403 SUPERFAMILY SSF55681 2 312 7.17E-92 T 11-10-2018 YH65_06920 011ac619ca4fb2170b34a4abce8acbb5 403 Pfam PF13393 Histidyl-tRNA synthetase 7 308 3.3E-43 T 11-10-2018 YH65_06920 011ac619ca4fb2170b34a4abce8acbb5 403 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 1 402 28.015 T 11-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 YH65_06920 011ac619ca4fb2170b34a4abce8acbb5 403 Pfam PF03129 Anticodon binding domain 347 403 1.9E-6 T 11-10-2018 IPR004154 Anticodon-binding YH65_06920 011ac619ca4fb2170b34a4abce8acbb5 403 Gene3D G3DSA:3.30.930.10 1 320 1.3E-110 T 11-10-2018 YH65_06920 011ac619ca4fb2170b34a4abce8acbb5 403 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 4 399 1.8E-138 T 11-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 YH65_06305 a6484ad84c8000641de95e2f5beb5339 417 PIRSF PIRSF004810 4 413 8.4E-79 T 11-10-2018 IPR014047 Chromate transporter, long chain YH65_06305 a6484ad84c8000641de95e2f5beb5339 417 Pfam PF02417 Chromate transporter 26 186 1.1E-29 T 11-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 YH65_06305 a6484ad84c8000641de95e2f5beb5339 417 Pfam PF02417 Chromate transporter 245 403 2.4E-35 T 11-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 YH65_06305 a6484ad84c8000641de95e2f5beb5339 417 TIGRFAM TIGR00937 2A51: chromate efflux transporter 32 402 2.4E-69 T 11-10-2018 IPR014047 Chromate transporter, long chain YH65_02660 dee323034bc4ca745aba81fdb1641514 89 Gene3D G3DSA:1.10.287.110 2 75 7.4E-18 T 11-10-2018 IPR036869 Chaperone J-domain superfamily YH65_02660 dee323034bc4ca745aba81fdb1641514 89 Pfam PF00226 DnaJ domain 13 60 8.4E-11 T 11-10-2018 IPR001623 DnaJ domain YH65_02660 dee323034bc4ca745aba81fdb1641514 89 SUPERFAMILY SSF46565 11 71 6.67E-16 T 11-10-2018 IPR036869 Chaperone J-domain superfamily YH65_02660 dee323034bc4ca745aba81fdb1641514 89 SMART SM00271 9 63 2.2E-9 T 11-10-2018 IPR001623 DnaJ domain YH65_02260 0b5a2439ef74d2e646eaefa4f1902a84 314 SUPERFAMILY SSF53756 1 313 6.59E-75 T 11-10-2018 YH65_02260 0b5a2439ef74d2e646eaefa4f1902a84 314 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 145 313 5.0E-40 T 11-10-2018 IPR011910 ADP-heptose--LPS heptosyltransferase 2 GO:0009103|GO:0016757 YH65_02260 0b5a2439ef74d2e646eaefa4f1902a84 314 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 106 294 4.2E-39 T 11-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 YH65_02260 0b5a2439ef74d2e646eaefa4f1902a84 314 Gene3D G3DSA:3.40.50.2000 137 314 2.9E-54 T 11-10-2018 YH65_02260 0b5a2439ef74d2e646eaefa4f1902a84 314 Gene3D G3DSA:3.40.50.2000 1 136 1.1E-16 T 11-10-2018 YH65_10630 27ba35514205ba9569d0da089bfad495 131 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 1 131 25.66 T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_10630 27ba35514205ba9569d0da089bfad495 131 SUPERFAMILY SSF56047 1 131 3.14E-38 T 11-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_10630 27ba35514205ba9569d0da089bfad495 131 Pfam PF00410 Ribosomal protein S8 4 131 4.3E-42 T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_10630 27ba35514205ba9569d0da089bfad495 131 Gene3D G3DSA:3.30.1490.10 74 131 1.0E-21 T 11-10-2018 YH65_10630 27ba35514205ba9569d0da089bfad495 131 ProSitePatterns PS00053 Ribosomal protein S8 signature. 101 118 - T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_10630 27ba35514205ba9569d0da089bfad495 131 Gene3D G3DSA:3.30.1370.30 1 73 2.4E-19 T 11-10-2018 YH65_03385 3606e6a541c4f557691545515d5489ed 411 SMART SM00646 241 398 1.2E-35 T 11-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 YH65_03385 3606e6a541c4f557691545515d5489ed 411 Gene3D G3DSA:2.60.40.3500 27 112 8.5E-10 T 11-10-2018 YH65_03385 3606e6a541c4f557691545515d5489ed 411 Gene3D G3DSA:3.40.630.40 170 409 2.0E-67 T 11-10-2018 YH65_03385 3606e6a541c4f557691545515d5489ed 411 Pfam PF11741 AMIN domain 34 109 3.2E-8 T 11-10-2018 IPR021731 AMIN domain YH65_03385 3606e6a541c4f557691545515d5489ed 411 SUPERFAMILY SSF53187 182 401 3.14E-49 T 11-10-2018 YH65_03385 3606e6a541c4f557691545515d5489ed 411 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 183 398 1.4E-48 T 11-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 YH65_03945 30b95862db744f8657227bed2e8961ac 264 SUPERFAMILY SSF52540 38 224 1.25E-29 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_03945 30b95862db744f8657227bed2e8961ac 264 Gene3D G3DSA:3.40.50.300 2 254 3.8E-93 T 11-10-2018 YH65_03945 30b95862db744f8657227bed2e8961ac 264 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 11 233 3.4E-107 T 11-10-2018 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 KEGG: 00190+2.7.4.1 YH65_03945 30b95862db744f8657227bed2e8961ac 264 PIRSF PIRSF028756 5 257 4.3E-107 T 11-10-2018 IPR016898 Polyphosphate kinase 2 KEGG: 00190+2.7.4.1 YH65_03945 30b95862db744f8657227bed2e8961ac 264 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 11 232 7.6E-97 T 11-10-2018 IPR022488 Polyphosphate kinase-2-related YH65_03610 c31ebbab1508cce932ab9b3a2d8c1c1f 239 SUPERFAMILY SSF53448 2 235 3.05E-54 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YH65_03610 c31ebbab1508cce932ab9b3a2d8c1c1f 239 Pfam PF02348 Cytidylyltransferase 1 209 4.1E-50 T 11-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 YH65_03610 c31ebbab1508cce932ab9b3a2d8c1c1f 239 Gene3D G3DSA:3.90.550.10 1 238 3.6E-77 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YH65_03610 c31ebbab1508cce932ab9b3a2d8c1c1f 239 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 238 32.492 T 11-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 YH65_03610 c31ebbab1508cce932ab9b3a2d8c1c1f 239 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 231 5.9E-77 T 11-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 YH65_03330 48743de89439dc777614716b80545636 317 Gene3D G3DSA:3.10.290.10 10 64 4.5E-15 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 YH65_03330 48743de89439dc777614716b80545636 317 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 129 143 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 YH65_03330 48743de89439dc777614716b80545636 317 Gene3D G3DSA:3.30.2350.10 67 285 3.0E-62 T 11-10-2018 YH65_03330 48743de89439dc777614716b80545636 317 SMART SM00363 10 70 3.5E-13 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_03330 48743de89439dc777614716b80545636 317 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 9 295 3.7E-79 T 11-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 YH65_03330 48743de89439dc777614716b80545636 317 Pfam PF01479 S4 domain 11 56 2.1E-12 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_03330 48743de89439dc777614716b80545636 317 SUPERFAMILY SSF55174 9 98 9.55E-17 T 11-10-2018 YH65_03330 48743de89439dc777614716b80545636 317 SUPERFAMILY SSF55120 68 293 5.12E-66 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 YH65_03330 48743de89439dc777614716b80545636 317 Pfam PF00849 RNA pseudouridylate synthase 84 236 5.8E-27 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 YH65_06740 fd44db26e2b2c7d39ee6da50b683cb6e 328 SUPERFAMILY SSF53955 25 327 1.24E-61 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily YH65_06740 fd44db26e2b2c7d39ee6da50b683cb6e 328 Pfam PF13406 Transglycosylase SLT domain 34 325 3.4E-68 T 11-10-2018 IPR031304 Transglycosylase SLT domain 2 YH65_06740 fd44db26e2b2c7d39ee6da50b683cb6e 328 Gene3D G3DSA:1.10.8.350 36 205 3.1E-83 T 11-10-2018 YH65_06740 fd44db26e2b2c7d39ee6da50b683cb6e 328 Gene3D G3DSA:1.10.530.10 75 327 3.1E-83 T 11-10-2018 YH65_03715 6fde1e89b24907c61c58c4e2fb186c68 245 Pfam PF01709 Transcriptional regulator 5 244 9.3E-76 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YH65_03715 6fde1e89b24907c61c58c4e2fb186c68 245 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 245 26.295 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YH65_03715 6fde1e89b24907c61c58c4e2fb186c68 245 Gene3D G3DSA:3.30.70.980 131 210 1.2E-45 T 11-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YH65_03715 6fde1e89b24907c61c58c4e2fb186c68 245 Gene3D G3DSA:3.30.70.980 82 243 1.2E-45 T 11-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YH65_03715 6fde1e89b24907c61c58c4e2fb186c68 245 SUPERFAMILY SSF75625 1 244 7.59E-74 T 11-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YH65_03715 6fde1e89b24907c61c58c4e2fb186c68 245 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 2 244 8.1E-74 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YH65_03715 6fde1e89b24907c61c58c4e2fb186c68 245 Gene3D G3DSA:1.10.10.200 21 77 1.5E-23 T 11-10-2018 IPR017856 Integrase-like, N-terminal YH65_03000 6ccfcc9998dea7621621d76cc1c7cca8 61 PIRSF PIRSF037225 2 59 3.9E-18 T 11-10-2018 IPR017143 Uncharacterised conserved protein UCP037225 YH65_03000 6ccfcc9998dea7621621d76cc1c7cca8 61 Pfam PF14255 Cysteine-rich CPXCG 7 49 1.3E-18 T 11-10-2018 IPR025990 Cysteine-rich CPXCG protein YH65_02830 18d41fa350c9e0543db25bff8cb500e3 514 Gene3D G3DSA:3.60.10.10 15 330 8.1E-34 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily YH65_02830 18d41fa350c9e0543db25bff8cb500e3 514 SUPERFAMILY SSF56219 17 330 1.28E-34 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily YH65_02830 18d41fa350c9e0543db25bff8cb500e3 514 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 21 276 9.8E-9 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase YH65_06625 6ac3f86ff4eb3b91010f3fe8df106972 118 SUPERFAMILY SSF57716 82 117 1.05E-7 T 11-10-2018 YH65_06625 6ac3f86ff4eb3b91010f3fe8df106972 118 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 80 114 8.7E-11 T 11-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 YH65_06625 6ac3f86ff4eb3b91010f3fe8df106972 118 SUPERFAMILY SSF109635 1 81 8.76E-15 T 11-10-2018 IPR037187 DksA, N-terminal domain superfamily YH65_06625 6ac3f86ff4eb3b91010f3fe8df106972 118 Gene3D G3DSA:1.20.120.910 1 118 1.8E-30 T 11-10-2018 YH65_07655 6c8795364b99171bc2bc661151164b8d 567 Gene3D G3DSA:2.60.40.420 20 157 2.9E-41 T 11-10-2018 IPR008972 Cupredoxin YH65_07655 6c8795364b99171bc2bc661151164b8d 567 Gene3D G3DSA:2.60.40.420 435 567 3.7E-26 T 11-10-2018 IPR008972 Cupredoxin YH65_07655 6c8795364b99171bc2bc661151164b8d 567 Pfam PF07731 Multicopper oxidase 452 566 5.8E-22 T 11-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 YH65_07655 6c8795364b99171bc2bc661151164b8d 567 Pfam PF00394 Multicopper oxidase 168 330 7.2E-28 T 11-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 YH65_07655 6c8795364b99171bc2bc661151164b8d 567 ProSitePatterns PS00079 Multicopper oxidases signature 1. 133 153 - T 11-10-2018 IPR033138 Multicopper oxidases, conserved site YH65_07655 6c8795364b99171bc2bc661151164b8d 567 Gene3D G3DSA:2.60.40.420 163 377 8.3E-40 T 11-10-2018 IPR008972 Cupredoxin YH65_07655 6c8795364b99171bc2bc661151164b8d 567 SUPERFAMILY SSF49503 410 566 1.37E-33 T 11-10-2018 IPR008972 Cupredoxin YH65_07655 6c8795364b99171bc2bc661151164b8d 567 SUPERFAMILY SSF49503 162 376 5.71E-50 T 11-10-2018 IPR008972 Cupredoxin YH65_07655 6c8795364b99171bc2bc661151164b8d 567 Pfam PF07732 Multicopper oxidase 48 159 3.8E-40 T 11-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 YH65_07655 6c8795364b99171bc2bc661151164b8d 567 SUPERFAMILY SSF49503 35 182 4.32E-42 T 11-10-2018 IPR008972 Cupredoxin YH65_07655 6c8795364b99171bc2bc661151164b8d 567 TIGRFAM TIGR01480 copper_res_A: copper-resistance protein, CopA family 1 566 1.9E-240 T 11-10-2018 IPR006376 Copper-resistance protein CopA GO:0005507|GO:0042597 YH65_03720 6722000f512b038d4f6194e0dfcfc6c0 478 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 4 464 40.366 T 11-10-2018 IPR003846 Uncharacterised protein family UPF0061 YH65_03720 6722000f512b038d4f6194e0dfcfc6c0 478 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 5 443 1.2E-138 T 11-10-2018 IPR003846 Uncharacterised protein family UPF0061 YH65_06905 c5b118fb81646dda70b22d177d89a2d6 173 SUPERFAMILY SSF52507 2 173 6.02E-50 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 YH65_06905 c5b118fb81646dda70b22d177d89a2d6 173 Gene3D G3DSA:3.40.50.1950 1 173 6.4E-60 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 YH65_06905 c5b118fb81646dda70b22d177d89a2d6 173 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 2 172 1.3E-49 T 11-10-2018 IPR004507 Flavin prenyltransferase UbiX-like YH65_06905 c5b118fb81646dda70b22d177d89a2d6 173 Pfam PF02441 Flavoprotein 2 160 1.6E-25 T 11-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 YH65_03395 6f1ed11851dd1f5e4cf97c8ff3a63c70 170 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 32 169 3.2E-45 T 11-10-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ YH65_03505 26bc9db2ad8f0a39edca440c5892dc88 131 Pfam PF01641 SelR domain 12 129 4.1E-52 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 YH65_03505 26bc9db2ad8f0a39edca440c5892dc88 131 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 5 131 36.599 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 YH65_03505 26bc9db2ad8f0a39edca440c5892dc88 131 SUPERFAMILY SSF51316 6 130 7.85E-58 T 11-10-2018 IPR011057 Mss4-like superfamily YH65_03505 26bc9db2ad8f0a39edca440c5892dc88 131 Gene3D G3DSA:2.170.150.20 1 131 2.9E-59 T 11-10-2018 YH65_03505 26bc9db2ad8f0a39edca440c5892dc88 131 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 9 128 7.0E-55 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 YH65_03260 e8af60b1a962f215b3def1fa1a7a760a 412 Gene3D G3DSA:2.120.10.30 150 412 4.1E-31 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like YH65_03260 e8af60b1a962f215b3def1fa1a7a760a 412 Pfam PF07676 WD40-like Beta Propeller Repeat 263 297 0.25 T 11-10-2018 IPR011659 WD40-like Beta Propeller YH65_03260 e8af60b1a962f215b3def1fa1a7a760a 412 SUPERFAMILY SSF69304 171 412 6.54E-26 T 11-10-2018 YH65_04385 52c31caed18854108b630450b1ed82a2 193 Gene3D G3DSA:3.40.50.150 4 188 9.1E-25 T 11-10-2018 YH65_04385 52c31caed18854108b630450b1ed82a2 193 SUPERFAMILY SSF53335 3 175 1.18E-24 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YH65_04385 52c31caed18854108b630450b1ed82a2 193 Pfam PF13649 Methyltransferase domain 20 110 2.0E-16 T 11-10-2018 YH65_07220 2b36d4954a54968248283a57801a748f 1203 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 918 1173 2.2E-23 T 11-10-2018 IPR007452 Translocation and assembly module TamB YH65_07335 a64f3f7e47855b1cf117d746cf7219bc 442 Gene3D G3DSA:3.40.50.880 249 437 1.4E-19 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like YH65_07335 a64f3f7e47855b1cf117d746cf7219bc 442 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 225 7.0E-19 T 11-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain YH65_07335 a64f3f7e47855b1cf117d746cf7219bc 442 Gene3D G3DSA:3.40.50.300 1 241 1.0E-41 T 11-10-2018 YH65_07335 a64f3f7e47855b1cf117d746cf7219bc 442 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 442 108.689 T 11-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 YH65_07335 a64f3f7e47855b1cf117d746cf7219bc 442 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 6 422 4.5E-116 T 11-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 YH65_07335 a64f3f7e47855b1cf117d746cf7219bc 442 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 252 408 4.5E-29 T 11-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 YH65_07335 a64f3f7e47855b1cf117d746cf7219bc 442 SUPERFAMILY SSF52317 190 386 3.97E-24 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like YH65_07335 a64f3f7e47855b1cf117d746cf7219bc 442 SUPERFAMILY SSF52540 1 227 2.27E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_01365 2c53182ad884ba59f9d88567028cd403 441 Pfam PF01554 MatE 18 178 1.3E-30 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 YH65_01365 2c53182ad884ba59f9d88567028cd403 441 Pfam PF01554 MatE 240 400 1.7E-36 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 YH65_01365 2c53182ad884ba59f9d88567028cd403 441 PIRSF PIRSF006603 7 441 4.6E-102 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 YH65_01365 2c53182ad884ba59f9d88567028cd403 441 TIGRFAM TIGR00797 matE: MATE efflux family protein 18 407 9.0E-97 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 YH65_10850 6f46d3fdf95010bd214b7cf094768316 701 Gene3D G3DSA:3.10.20.580 595 701 1.6E-18 T 11-10-2018 YH65_10850 6f46d3fdf95010bd214b7cf094768316 701 Gene3D G3DSA:3.40.50.10710 353 511 1.3E-169 T 11-10-2018 YH65_10850 6f46d3fdf95010bd214b7cf094768316 701 Hamap MF_01491 Ribonuclease J [rnj]. 148 701 41.442 T 11-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 YH65_10850 6f46d3fdf95010bd214b7cf094768316 701 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 499 550 1.2E-9 T 11-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain YH65_10850 6f46d3fdf95010bd214b7cf094768316 701 Pfam PF00753 Metallo-beta-lactamase superfamily 162 310 5.1E-14 T 11-10-2018 IPR001279 Metallo-beta-lactamase YH65_10850 6f46d3fdf95010bd214b7cf094768316 701 SMART SM00849 165 361 3.3E-16 T 11-10-2018 IPR001279 Metallo-beta-lactamase YH65_10850 6f46d3fdf95010bd214b7cf094768316 701 SUPERFAMILY SSF56281 154 570 1.83E-87 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like YH65_10850 6f46d3fdf95010bd214b7cf094768316 701 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 153 698 7.9E-188 T 11-10-2018 IPR004613 Ribonuclease J GO:0003723|GO:0046872 YH65_10850 6f46d3fdf95010bd214b7cf094768316 701 Gene3D G3DSA:3.60.15.10 154 582 1.3E-169 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like YH65_10700 d9991546dacc6c2940d8216bd0d6ad08 245 Gene3D G3DSA:3.90.460.10 6 127 9.9E-23 T 11-10-2018 IPR036644 Ferredoxin thioredoxin reductase catalytic beta subunit superfamily GO:0016730|GO:0055114 YH65_10700 d9991546dacc6c2940d8216bd0d6ad08 245 Pfam PF02943 Ferredoxin thioredoxin reductase catalytic beta chain 14 120 2.8E-38 T 11-10-2018 IPR004209 Ferredoxin thioredoxin reductase catalytic beta subunit GO:0016730|GO:0055114 YH65_10700 d9991546dacc6c2940d8216bd0d6ad08 245 Gene3D G3DSA:3.40.250.10 138 245 4.5E-18 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily YH65_10700 d9991546dacc6c2940d8216bd0d6ad08 245 SUPERFAMILY SSF52821 132 240 1.57E-20 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily YH65_10700 d9991546dacc6c2940d8216bd0d6ad08 245 SUPERFAMILY SSF57662 12 114 3.53E-27 T 11-10-2018 IPR036644 Ferredoxin thioredoxin reductase catalytic beta subunit superfamily GO:0016730|GO:0055114 YH65_10700 d9991546dacc6c2940d8216bd0d6ad08 245 Pfam PF00581 Rhodanese-like domain 147 238 2.8E-11 T 11-10-2018 IPR001763 Rhodanese-like domain YH65_10700 d9991546dacc6c2940d8216bd0d6ad08 245 SMART SM00450 146 244 1.0E-14 T 11-10-2018 IPR001763 Rhodanese-like domain YH65_05310 08e359f64bcf91d73facb68e09d65388 283 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 102 271 5.2E-30 T 11-10-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG YH65_05310 08e359f64bcf91d73facb68e09d65388 283 Pfam PF03641 Possible lysine decarboxylase 141 271 1.4E-31 T 11-10-2018 IPR031100 LOG family YH65_05310 08e359f64bcf91d73facb68e09d65388 283 SUPERFAMILY SSF102405 27 271 2.9E-48 T 11-10-2018 YH65_02045 995c66f6ff2e3e44ea475868ff634954 632 TIGRFAM TIGR00341 TIGR00341: TIGR00341 family protein 343 543 7.6E-30 T 11-10-2018 YH65_02045 995c66f6ff2e3e44ea475868ff634954 632 SUPERFAMILY SSF111331 60 284 1.18E-14 T 11-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily YH65_02045 995c66f6ff2e3e44ea475868ff634954 632 Gene3D G3DSA:2.60.200.40 131 274 4.7E-8 T 11-10-2018 YH65_02045 995c66f6ff2e3e44ea475868ff634954 632 Pfam PF04087 Domain of unknown function (DUF389) 376 512 3.1E-36 T 11-10-2018 IPR005240 Protein of unknown function DUF389 YH65_02060 be8d148614ccd14ef90fe8f99a7f824d 396 PIRSF PIRSF000722 1 395 3.0E-153 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 YH65_02060 be8d148614ccd14ef90fe8f99a7f824d 396 SUPERFAMILY SSF53067 152 392 1.47E-85 T 11-10-2018 YH65_02060 be8d148614ccd14ef90fe8f99a7f824d 396 Gene3D G3DSA:3.30.420.40 192 394 7.0E-84 T 11-10-2018 YH65_02060 be8d148614ccd14ef90fe8f99a7f824d 396 PRINTS PR00471 Acetate kinase family signature 295 308 3.7E-47 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 YH65_02060 be8d148614ccd14ef90fe8f99a7f824d 396 PRINTS PR00471 Acetate kinase family signature 317 333 3.7E-47 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 YH65_02060 be8d148614ccd14ef90fe8f99a7f824d 396 PRINTS PR00471 Acetate kinase family signature 3 14 3.7E-47 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 YH65_02060 be8d148614ccd14ef90fe8f99a7f824d 396 PRINTS PR00471 Acetate kinase family signature 199 220 3.7E-47 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 YH65_02060 be8d148614ccd14ef90fe8f99a7f824d 396 PRINTS PR00471 Acetate kinase family signature 373 385 3.7E-47 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 YH65_02060 be8d148614ccd14ef90fe8f99a7f824d 396 PRINTS PR00471 Acetate kinase family signature 169 182 3.7E-47 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 YH65_02060 be8d148614ccd14ef90fe8f99a7f824d 396 TIGRFAM TIGR00016 ackA: acetate kinase 1 390 1.0E-147 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 YH65_02060 be8d148614ccd14ef90fe8f99a7f824d 396 Gene3D G3DSA:3.30.420.40 1 191 4.4E-71 T 11-10-2018 YH65_02060 be8d148614ccd14ef90fe8f99a7f824d 396 Hamap MF_00020 Acetate kinase [ackA]. 1 395 174.26 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 YH65_02060 be8d148614ccd14ef90fe8f99a7f824d 396 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 199 216 - T 11-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 YH65_02060 be8d148614ccd14ef90fe8f99a7f824d 396 SUPERFAMILY SSF53067 1 191 2.46E-64 T 11-10-2018 YH65_02060 be8d148614ccd14ef90fe8f99a7f824d 396 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 3 14 - T 11-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 YH65_02060 be8d148614ccd14ef90fe8f99a7f824d 396 Pfam PF00871 Acetokinase family 2 386 5.5E-150 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 YH65_10845 660a81488f61f8a94ff209cbeb78529e 322 PIRSF PIRSF004692 1 320 1.0E-129 T 11-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 YH65_10845 660a81488f61f8a94ff209cbeb78529e 322 Pfam PF00571 CBS domain 282 317 4.0E-5 T 11-10-2018 IPR000644 CBS domain YH65_10845 660a81488f61f8a94ff209cbeb78529e 322 Pfam PF00571 CBS domain 197 253 1.2E-6 T 11-10-2018 IPR000644 CBS domain YH65_10845 660a81488f61f8a94ff209cbeb78529e 322 SUPERFAMILY SSF53697 2 317 3.11E-65 T 11-10-2018 YH65_10845 660a81488f61f8a94ff209cbeb78529e 322 Gene3D G3DSA:3.10.580.10 192 317 1.3E-33 T 11-10-2018 YH65_10845 660a81488f61f8a94ff209cbeb78529e 322 Pfam PF01380 SIS domain 38 168 8.6E-30 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 YH65_10845 660a81488f61f8a94ff209cbeb78529e 322 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 41 310 5.0E-109 T 11-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 YH65_10845 660a81488f61f8a94ff209cbeb78529e 322 Gene3D G3DSA:3.40.50.10490 1 191 5.6E-68 T 11-10-2018 YH65_10845 660a81488f61f8a94ff209cbeb78529e 322 SMART SM00116 271 319 54.0 T 11-10-2018 IPR000644 CBS domain YH65_10845 660a81488f61f8a94ff209cbeb78529e 322 SMART SM00116 205 253 0.021 T 11-10-2018 IPR000644 CBS domain YH65_09740 d631345937ccad56dc9830caf501ded4 225 Pfam PF04055 Radical SAM superfamily 28 163 3.6E-19 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 YH65_09740 d631345937ccad56dc9830caf501ded4 225 SUPERFAMILY SSF102114 24 198 4.45E-29 T 11-10-2018 YH65_09740 d631345937ccad56dc9830caf501ded4 225 TIGRFAM TIGR02495 NrdG2: anaerobic ribonucleoside-triphosphate reductase activating protein 6 193 3.0E-59 T 11-10-2018 IPR012840 Anaerobic ribonucleoside-triphosphate reductase activating protein YH65_09740 d631345937ccad56dc9830caf501ded4 225 Pfam PF13394 4Fe-4S single cluster domain 25 106 1.1E-8 T 11-10-2018 YH65_09740 d631345937ccad56dc9830caf501ded4 225 Gene3D G3DSA:3.20.20.70 5 216 2.8E-30 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YH65_03765 0e30b9ff152c17885145ce043f709d80 346 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 2 343 46.217 T 11-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 YH65_03765 0e30b9ff152c17885145ce043f709d80 346 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 5 340 2.7E-126 T 11-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 YH65_03765 0e30b9ff152c17885145ce043f709d80 346 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 139 155 - T 11-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 YH65_03765 0e30b9ff152c17885145ce043f709d80 346 SUPERFAMILY SSF51726 3 343 3.31E-108 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 YH65_03765 0e30b9ff152c17885145ce043f709d80 346 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 18 27 - T 11-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 YH65_03765 0e30b9ff152c17885145ce043f709d80 346 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 4 341 8.4E-117 T 11-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 YH65_03765 0e30b9ff152c17885145ce043f709d80 346 Gene3D G3DSA:3.20.20.210 1 346 6.2E-130 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 YH65_02520 f7951b3d9f9587453d1ab6e0d4f244b9 1514 SMART SM00089 41 126 1.1E-6 T 11-10-2018 IPR022409 PKD/Chitinase domain YH65_02520 f7951b3d9f9587453d1ab6e0d4f244b9 1514 SUPERFAMILY SSF49299 37 127 6.08E-13 T 11-10-2018 IPR035986 PKD domain superfamily YH65_02520 f7951b3d9f9587453d1ab6e0d4f244b9 1514 Gene3D G3DSA:2.60.40.10 33 126 6.7E-14 T 11-10-2018 IPR013783 Immunoglobulin-like fold YH65_00070 771ad051a21e37e5965c90d3456480a8 499 SUPERFAMILY SSF52540 195 498 6.23E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_00070 771ad051a21e37e5965c90d3456480a8 499 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 7 496 3.3E-128 T 11-10-2018 IPR004482 Mg chelatase-related protein YH65_00070 771ad051a21e37e5965c90d3456480a8 499 Pfam PF01078 Magnesium chelatase, subunit ChlI 196 398 9.9E-76 T 11-10-2018 IPR000523 Magnesium chelatase ChlI domain YH65_00070 771ad051a21e37e5965c90d3456480a8 499 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 405 496 1.0E-21 T 11-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain YH65_00070 771ad051a21e37e5965c90d3456480a8 499 Gene3D G3DSA:3.40.50.300 178 498 1.7E-45 T 11-10-2018 YH65_00070 771ad051a21e37e5965c90d3456480a8 499 Pfam PF13541 Subunit ChlI of Mg-chelatase 16 135 7.8E-35 T 11-10-2018 YH65_00070 771ad051a21e37e5965c90d3456480a8 499 SUPERFAMILY SSF54211 3 161 3.79E-24 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold YH65_00070 771ad051a21e37e5965c90d3456480a8 499 Gene3D G3DSA:3.30.230.10 4 163 1.6E-8 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YH65_10670 d56c99964118cff0db8d3c2c6f95b453 37 Pfam PF00444 Ribosomal protein L36 1 37 2.3E-20 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_10670 d56c99964118cff0db8d3c2c6f95b453 37 SUPERFAMILY SSF57840 1 37 1.96E-17 T 11-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_10670 d56c99964118cff0db8d3c2c6f95b453 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 17.919 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_10670 d56c99964118cff0db8d3c2c6f95b453 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 6.8E-24 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_10670 d56c99964118cff0db8d3c2c6f95b453 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 37 2.0E-7 T 11-10-2018 YH65_10670 d56c99964118cff0db8d3c2c6f95b453 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_10965 57c2e968d9b901cc213b5ae362307abc 248 SUPERFAMILY SSF54506 129 238 1.91E-21 T 11-10-2018 YH65_10965 57c2e968d9b901cc213b5ae362307abc 248 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 60 74 - T 11-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 YH65_10965 57c2e968d9b901cc213b5ae362307abc 248 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 2 240 1.4E-55 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 YH65_10965 57c2e968d9b901cc213b5ae362307abc 248 Pfam PF01678 Diaminopimelate epimerase 133 222 1.6E-9 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 YH65_10965 57c2e968d9b901cc213b5ae362307abc 248 Pfam PF01678 Diaminopimelate epimerase 4 105 2.3E-24 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 YH65_10965 57c2e968d9b901cc213b5ae362307abc 248 SUPERFAMILY SSF54506 2 116 9.07E-32 T 11-10-2018 YH65_10965 57c2e968d9b901cc213b5ae362307abc 248 Gene3D G3DSA:3.10.310.10 110 235 1.6E-58 T 11-10-2018 YH65_10965 57c2e968d9b901cc213b5ae362307abc 248 Gene3D G3DSA:3.10.310.10 4 241 1.6E-58 T 11-10-2018 YH65_02205 f3817a8046a1495a58a4fa3d7e6724d2 239 Gene3D G3DSA:1.20.120.1760 3 127 6.4E-15 T 11-10-2018 YH65_02205 f3817a8046a1495a58a4fa3d7e6724d2 239 Pfam PF01066 CDP-alcohol phosphatidyltransferase 11 74 1.1E-14 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 YH65_02205 f3817a8046a1495a58a4fa3d7e6724d2 239 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 52 74 - T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 YH65_02205 f3817a8046a1495a58a4fa3d7e6724d2 239 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 16 177 1.8E-50 T 11-10-2018 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 YH65_09020 fc867913d61fdfaa9eb1490c940571cc 153 Gene3D G3DSA:2.40.50.140 83 153 1.3E-8 T 11-10-2018 YH65_09020 fc867913d61fdfaa9eb1490c940571cc 153 Pfam PF01957 NfeD-like C-terminal, partner-binding 13 150 1.9E-15 T 11-10-2018 IPR002810 NfeD-like, C-terminal domain YH65_09020 fc867913d61fdfaa9eb1490c940571cc 153 SUPERFAMILY SSF141322 92 151 3.66E-5 T 11-10-2018 YH65_04930 d881ccef72e3373c619baee270917482 116 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 83 108 1.0E-5 T 11-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 YH65_04930 d881ccef72e3373c619baee270917482 116 SUPERFAMILY SSF109635 8 84 1.01E-7 T 11-10-2018 IPR037187 DksA, N-terminal domain superfamily YH65_04930 d881ccef72e3373c619baee270917482 116 Gene3D G3DSA:1.20.120.910 1 116 1.2E-24 T 11-10-2018 YH65_02225 3629f56fd2d7b07ff379ff35ee761991 203 Pfam PF00117 Glutamine amidotransferase class-I 5 200 4.4E-21 T 11-10-2018 IPR017926 Glutamine amidotransferase YH65_02225 3629f56fd2d7b07ff379ff35ee761991 203 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 1 203 35.596 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 YH65_02225 3629f56fd2d7b07ff379ff35ee761991 203 SUPERFAMILY SSF52317 2 202 9.59E-59 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like YH65_02225 3629f56fd2d7b07ff379ff35ee761991 203 PIRSF PIRSF000495 1 203 2.6E-75 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 YH65_02225 3629f56fd2d7b07ff379ff35ee761991 203 Gene3D G3DSA:3.40.50.880 1 203 1.6E-82 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like YH65_02225 3629f56fd2d7b07ff379ff35ee761991 203 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 2 202 1.2E-71 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 YH65_02575 7683e2074d1c585bd09cf0bb813f946b 447 Pfam PF03600 Citrate transporter 41 390 1.4E-36 T 11-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 YH65_10865 d231565936a6d31c595b770ca0c79dde 176 SUPERFAMILY SSF53167 15 171 2.09E-25 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 YH65_10865 d231565936a6d31c595b770ca0c79dde 176 Pfam PF01048 Phosphorylase superfamily 104 170 1.9E-6 T 11-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 YH65_10865 d231565936a6d31c595b770ca0c79dde 176 Gene3D G3DSA:3.40.50.1580 8 176 2.5E-22 T 11-10-2018 YH65_05435 c6542ba8c20d0dc74ba94ccc035b18fb 373 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 3 372 3.6E-159 T 11-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 YH65_05435 c6542ba8c20d0dc74ba94ccc035b18fb 373 Gene3D G3DSA:3.20.20.105 1 373 1.4E-162 T 11-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 YH65_05435 c6542ba8c20d0dc74ba94ccc035b18fb 373 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 3 372 2.7E-151 T 11-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 YH65_05435 c6542ba8c20d0dc74ba94ccc035b18fb 373 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 370 53.232 T 11-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 YH65_05435 c6542ba8c20d0dc74ba94ccc035b18fb 373 SUPERFAMILY SSF51713 1 370 4.84E-148 T 11-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 YH65_05435 c6542ba8c20d0dc74ba94ccc035b18fb 373 Pfam PF01702 Queuine tRNA-ribosyltransferase 127 367 1.6E-90 T 11-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 YH65_02280 9f8c6b531c4ea14e3238efc622c5742b 336 Pfam PF01370 NAD dependent epimerase/dehydratase family 13 257 7.1E-39 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 YH65_02280 9f8c6b531c4ea14e3238efc622c5742b 336 Gene3D G3DSA:3.90.25.10 189 319 9.4E-90 T 11-10-2018 YH65_02280 9f8c6b531c4ea14e3238efc622c5742b 336 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 13 326 7.7E-96 T 11-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 YH65_02280 9f8c6b531c4ea14e3238efc622c5742b 336 SUPERFAMILY SSF51735 6 329 1.16E-66 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily YH65_02280 9f8c6b531c4ea14e3238efc622c5742b 336 Gene3D G3DSA:3.40.50.720 13 309 9.4E-90 T 11-10-2018 YH65_04085 4f62abbe69185a503dd5954bf8baeaf3 192 SUPERFAMILY SSF141523 60 163 6.67E-18 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like YH65_04085 4f62abbe69185a503dd5954bf8baeaf3 192 Pfam PF03734 L,D-transpeptidase catalytic domain 49 163 1.8E-10 T 11-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 YH65_04085 4f62abbe69185a503dd5954bf8baeaf3 192 Gene3D G3DSA:2.40.440.10 54 172 8.2E-17 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like YH65_03185 6f7fc9b75dd1ddeb40e5ad399688a7d7 211 Pfam PF03099 Biotin/lipoate A/B protein ligase family 7 129 9.2E-13 T 11-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 YH65_03185 6f7fc9b75dd1ddeb40e5ad399688a7d7 211 Gene3D G3DSA:3.30.930.10 1 175 9.4E-28 T 11-10-2018 YH65_03185 6f7fc9b75dd1ddeb40e5ad399688a7d7 211 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 2 205 1.5E-30 T 11-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 YH65_03185 6f7fc9b75dd1ddeb40e5ad399688a7d7 211 SUPERFAMILY SSF55681 3 160 2.49E-29 T 11-10-2018 YH65_05365 f73fb1144e186bfe133b1243d86bde3b 79 TIGRFAM TIGR00302 TIGR00302: phosphoribosylformylglycinamidine synthase, purS protein 5 79 2.9E-29 T 11-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 YH65_05365 f73fb1144e186bfe133b1243d86bde3b 79 Pfam PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase 4 78 7.5E-32 T 11-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 YH65_05365 f73fb1144e186bfe133b1243d86bde3b 79 Gene3D G3DSA:3.30.1280.10 3 79 4.2E-31 T 11-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 YH65_05365 f73fb1144e186bfe133b1243d86bde3b 79 SUPERFAMILY SSF82697 1 78 9.24E-28 T 11-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 YH65_05365 f73fb1144e186bfe133b1243d86bde3b 79 Hamap MF_01926 Phosphoribosylformylglycinamidine synthase subunit PurS [purS]. 2 78 21.349 T 11-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 YH65_05365 f73fb1144e186bfe133b1243d86bde3b 79 ProDom PD010362 PHOSPHORIBOSYLFORMYLGLYCINAMIDINE PURS SYNTHETASE SYNTHASE COMPONENT SYNTHASE LIGASE FGAM UPF0062 I 10 78 1.0E-16 T 11-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 YH65_04595 e285c0b13488a3dacf852c289c64461c 102 Pfam PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter 19 67 6.0E-10 T 11-10-2018 IPR032820 Putative F0F1-ATPase subunit, Ca2+/Mg2+ transporter YH65_06490 643b1569650e51d75a57d7c4688fff11 78 Hamap MF_00404 Probable oxaloacetate decarboxylase gamma chain [oadG]. 1 78 24.191 T 11-10-2018 IPR023424 Oxaloacetate decarboxylase gamma chain, probable GO:0008948 KEGG: 00620+4.1.1.3 YH65_06490 643b1569650e51d75a57d7c4688fff11 78 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 5 76 9.9E-15 T 11-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 YH65_06490 643b1569650e51d75a57d7c4688fff11 78 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 8 75 4.5E-17 T 11-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 YH65_01575 48cd685b0077bbcd11af5c7a69829ba1 419 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 169 350 7.2E-16 T 11-10-2018 IPR004477 ComEC/Rec2-related protein YH65_01575 48cd685b0077bbcd11af5c7a69829ba1 419 Pfam PF03772 Competence protein 156 388 7.0E-25 T 11-10-2018 IPR004477 ComEC/Rec2-related protein YH65_07600 3fe5fff4492d26a594068f8ff27a0397 354 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 6 353 2.6E-124 T 11-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 YH65_07600 3fe5fff4492d26a594068f8ff27a0397 354 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 289 309 - T 11-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 YH65_07600 3fe5fff4492d26a594068f8ff27a0397 354 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 5 333 42.578 T 11-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 YH65_07600 3fe5fff4492d26a594068f8ff27a0397 354 Gene3D G3DSA:3.20.20.70 3 354 1.5E-117 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YH65_07600 3fe5fff4492d26a594068f8ff27a0397 354 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 88 107 - T 11-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 YH65_07600 3fe5fff4492d26a594068f8ff27a0397 354 Pfam PF01180 Dihydroorotate dehydrogenase 54 337 4.8E-81 T 11-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 YH65_07600 3fe5fff4492d26a594068f8ff27a0397 354 PIRSF PIRSF000164 28 354 2.7E-101 T 11-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 YH65_07600 3fe5fff4492d26a594068f8ff27a0397 354 SUPERFAMILY SSF51395 5 353 2.41E-99 T 11-10-2018 YH65_07750 3a80bee54d8bad443722ae9d9890d280 176 Gene3D G3DSA:1.20.1290.10 17 175 4.9E-30 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 YH65_07750 3a80bee54d8bad443722ae9d9890d280 176 Pfam PF02627 Carboxymuconolactone decarboxylase family 54 120 3.6E-9 T 11-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 YH65_07750 3a80bee54d8bad443722ae9d9890d280 176 SUPERFAMILY SSF69118 1 174 1.03E-40 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 YH65_07750 3a80bee54d8bad443722ae9d9890d280 176 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 61 106 1.6E-10 T 11-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 YH65_08050 28f1b5eb8b15a1656b2c264d466f8887 178 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 26 174 4.4E-51 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 YH65_08050 28f1b5eb8b15a1656b2c264d466f8887 178 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 123 135 5.8E-27 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 YH65_08050 28f1b5eb8b15a1656b2c264d466f8887 178 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 108 123 5.8E-27 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 YH65_08050 28f1b5eb8b15a1656b2c264d466f8887 178 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 65 77 5.8E-27 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 YH65_08050 28f1b5eb8b15a1656b2c264d466f8887 178 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 136 151 5.8E-27 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 YH65_08050 28f1b5eb8b15a1656b2c264d466f8887 178 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 39 54 5.8E-27 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 YH65_08050 28f1b5eb8b15a1656b2c264d466f8887 178 PIRSF PIRSF001467 13 178 8.6E-57 T 11-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 YH65_08050 28f1b5eb8b15a1656b2c264d466f8887 178 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 60 77 - T 11-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 YH65_08050 28f1b5eb8b15a1656b2c264d466f8887 178 SUPERFAMILY SSF50891 16 174 1.4E-63 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily YH65_08050 28f1b5eb8b15a1656b2c264d466f8887 178 Gene3D G3DSA:2.40.100.10 13 177 5.9E-69 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily YH65_11120 0c608de8c4341ebfeb26b26d17b34523 159 Gene3D G3DSA:3.30.420.10 3 157 4.6E-45 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 YH65_11120 0c608de8c4341ebfeb26b26d17b34523 159 SUPERFAMILY SSF53098 1 155 8.72E-42 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily YH65_11120 0c608de8c4341ebfeb26b26d17b34523 159 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 3 150 5.0E-55 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 YH65_11120 0c608de8c4341ebfeb26b26d17b34523 159 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 3 155 8.3E-62 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 YH65_11120 0c608de8c4341ebfeb26b26d17b34523 159 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 1 153 39.336 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 YH65_11120 0c608de8c4341ebfeb26b26d17b34523 159 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 60 76 1.5E-20 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 YH65_11120 0c608de8c4341ebfeb26b26d17b34523 159 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 106 125 1.5E-20 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 YH65_11120 0c608de8c4341ebfeb26b26d17b34523 159 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 1.5E-20 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 YH65_11120 0c608de8c4341ebfeb26b26d17b34523 159 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 4 17 1.5E-20 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 YH65_11120 0c608de8c4341ebfeb26b26d17b34523 159 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 112 147 - T 11-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 YH65_10040 ea5a6b90158a4534701de32061940031 261 SUPERFAMILY SSF53335 29 174 7.3E-6 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YH65_10040 ea5a6b90158a4534701de32061940031 261 Gene3D G3DSA:3.40.50.150 15 249 9.7E-54 T 11-10-2018 YH65_10040 ea5a6b90158a4534701de32061940031 261 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 130 215 8.8E-22 T 11-10-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 MetaCyc: PWY-7892 YH65_06010 b19bf7cd40689d75d15ba9d9ed2b72c5 558 Pfam PF00474 Sodium:solute symporter family 64 477 6.9E-119 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 YH65_06010 b19bf7cd40689d75d15ba9d9ed2b72c5 558 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 64 474 2.6E-61 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 YH65_06010 b19bf7cd40689d75d15ba9d9ed2b72c5 558 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 179 204 - T 11-10-2018 IPR018212 Sodium/solute symporter, conserved site YH65_06010 b19bf7cd40689d75d15ba9d9ed2b72c5 558 Gene3D G3DSA:1.20.1730.10 51 554 3.1E-61 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily YH65_03360 1683794575913884137aec1fa544dba0 235 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 3 229 1.1E-92 T 11-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 YH65_03360 1683794575913884137aec1fa544dba0 235 Pfam PF00696 Amino acid kinase family 3 213 1.1E-34 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 YH65_03360 1683794575913884137aec1fa544dba0 235 PIRSF PIRSF005650 1 235 2.4E-86 T 11-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 YH65_03360 1683794575913884137aec1fa544dba0 235 SUPERFAMILY SSF53633 2 227 1.24E-67 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily YH65_03360 1683794575913884137aec1fa544dba0 235 Hamap MF_01220_B Uridylate kinase [pyrH]. 2 235 41.151 T 11-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 YH65_03360 1683794575913884137aec1fa544dba0 235 Gene3D G3DSA:3.40.1160.10 1 235 2.0E-75 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily YH65_03335 e0205a0a1f4fc73e4ddd1e4142d8fe1a 179 SUPERFAMILY SSF49265 45 175 3.57E-11 T 11-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 YH65_03335 e0205a0a1f4fc73e4ddd1e4142d8fe1a 179 Gene3D G3DSA:2.60.40.10 90 179 1.5E-10 T 11-10-2018 IPR013783 Immunoglobulin-like fold YH65_03335 e0205a0a1f4fc73e4ddd1e4142d8fe1a 179 Gene3D G3DSA:2.60.40.10 1 89 6.9E-9 T 11-10-2018 IPR013783 Immunoglobulin-like fold YH65_00985 cd83369aa1596eac5b584abd8c05f1e7 791 Gene3D G3DSA:1.10.1130.10 191 382 4.2E-7 T 11-10-2018 YH65_00985 cd83369aa1596eac5b584abd8c05f1e7 791 SUPERFAMILY SSF48695 99 317 4.45E-16 T 11-10-2018 IPR036280 Multiheme cytochrome superfamily YH65_00985 cd83369aa1596eac5b584abd8c05f1e7 791 SUPERFAMILY SSF48695 19 521 4.45E-26 T 11-10-2018 IPR036280 Multiheme cytochrome superfamily YH65_00985 cd83369aa1596eac5b584abd8c05f1e7 791 Pfam PF13435 Cytochrome c554 and c-prime 285 374 0.014 T 11-10-2018 IPR023155 Cytochrome c-552/4 YH65_00985 cd83369aa1596eac5b584abd8c05f1e7 791 SUPERFAMILY SSF48695 481 735 1.28E-10 T 11-10-2018 IPR036280 Multiheme cytochrome superfamily YH65_06230 c881589624616d38969eadce16050c2d 176 Gene3D G3DSA:1.10.10.1100 102 171 1.4E-17 T 11-10-2018 YH65_06230 c881589624616d38969eadce16050c2d 176 Gene3D G3DSA:2.20.25.270 39 101 3.5E-10 T 11-10-2018 YH65_07425 ebe4954c8b4790936248842505e0839d 205 Pfam PF13114 RecO N terminal 2 71 1.4E-22 T 11-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal YH65_08735 617b74a19f7b5ded066dfd26c76690b1 397 SMART SM00387 292 397 8.1E-19 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YH65_08735 617b74a19f7b5ded066dfd26c76690b1 397 Gene3D G3DSA:1.10.287.130 176 248 1.9E-8 T 11-10-2018 YH65_08735 617b74a19f7b5ded066dfd26c76690b1 397 SUPERFAMILY SSF47384 180 245 1.77E-7 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 YH65_08735 617b74a19f7b5ded066dfd26c76690b1 397 PRINTS PR00344 Bacterial sensor protein C-terminal signature 329 343 2.5E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YH65_08735 617b74a19f7b5ded066dfd26c76690b1 397 PRINTS PR00344 Bacterial sensor protein C-terminal signature 345 355 2.5E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YH65_08735 617b74a19f7b5ded066dfd26c76690b1 397 PRINTS PR00344 Bacterial sensor protein C-terminal signature 382 395 2.5E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YH65_08735 617b74a19f7b5ded066dfd26c76690b1 397 PRINTS PR00344 Bacterial sensor protein C-terminal signature 358 376 2.5E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 YH65_08735 617b74a19f7b5ded066dfd26c76690b1 397 Pfam PF00512 His Kinase A (phospho-acceptor) domain 188 241 2.2E-6 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YH65_08735 617b74a19f7b5ded066dfd26c76690b1 397 SMART SM00388 187 249 7.6E-4 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YH65_08735 617b74a19f7b5ded066dfd26c76690b1 397 SUPERFAMILY SSF55874 247 395 1.05E-33 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YH65_08735 617b74a19f7b5ded066dfd26c76690b1 397 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 295 395 4.5E-16 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YH65_08735 617b74a19f7b5ded066dfd26c76690b1 397 Gene3D G3DSA:3.30.565.10 249 397 8.3E-34 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YH65_08355 b1de7888c36aa71dc795c72941f727bc 571 SUPERFAMILY SSF82693 49 143 9.94E-6 T 11-10-2018 YH65_08355 b1de7888c36aa71dc795c72941f727bc 571 Gene3D G3DSA:3.30.70.1440 163 390 2.5E-71 T 11-10-2018 YH65_08355 b1de7888c36aa71dc795c72941f727bc 571 Gene3D G3DSA:3.30.70.1430 50 162 2.5E-71 T 11-10-2018 YH65_08355 b1de7888c36aa71dc795c72941f727bc 571 Gene3D G3DSA:1.20.1640.10 14 546 2.5E-71 T 11-10-2018 YH65_08355 b1de7888c36aa71dc795c72941f727bc 571 SUPERFAMILY SSF82866 373 548 1.83E-33 T 11-10-2018 YH65_08355 b1de7888c36aa71dc795c72941f727bc 571 Pfam PF00873 AcrB/AcrD/AcrF family 16 328 7.9E-22 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_08355 b1de7888c36aa71dc795c72941f727bc 571 Pfam PF00873 AcrB/AcrD/AcrF family 375 546 5.2E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_08355 b1de7888c36aa71dc795c72941f727bc 571 Gene3D G3DSA:3.30.2090.10 211 309 2.5E-71 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YH65_08355 b1de7888c36aa71dc795c72941f727bc 571 SUPERFAMILY SSF82714 213 303 8.11E-5 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YH65_06245 8d7f9a972817f638713b395fedec8d0f 420 PRINTS PR00758 Arsenical pump membrane protein signature 395 419 4.5E-84 T 11-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 YH65_06245 8d7f9a972817f638713b395fedec8d0f 420 PRINTS PR00758 Arsenical pump membrane protein signature 101 125 4.5E-84 T 11-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 YH65_06245 8d7f9a972817f638713b395fedec8d0f 420 PRINTS PR00758 Arsenical pump membrane protein signature 177 200 4.5E-84 T 11-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 YH65_06245 8d7f9a972817f638713b395fedec8d0f 420 PRINTS PR00758 Arsenical pump membrane protein signature 144 168 4.5E-84 T 11-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 YH65_06245 8d7f9a972817f638713b395fedec8d0f 420 PRINTS PR00758 Arsenical pump membrane protein signature 278 302 4.5E-84 T 11-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 YH65_06245 8d7f9a972817f638713b395fedec8d0f 420 PRINTS PR00758 Arsenical pump membrane protein signature 217 242 4.5E-84 T 11-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 YH65_06245 8d7f9a972817f638713b395fedec8d0f 420 PRINTS PR00758 Arsenical pump membrane protein signature 362 387 4.5E-84 T 11-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 YH65_06245 8d7f9a972817f638713b395fedec8d0f 420 TIGRFAM TIGR00935 2a45: arsenite/antimonite efflux pump membrane protein 3 419 1.7E-174 T 11-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 YH65_06245 8d7f9a972817f638713b395fedec8d0f 420 Pfam PF02040 Arsenical pump membrane protein 3 419 2.6E-144 T 11-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 YH65_02335 f41537ecce2edef1b29d78c66b53517d 242 SUPERFAMILY SSF53448 3 195 1.54E-39 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YH65_02335 f41537ecce2edef1b29d78c66b53517d 242 Pfam PF00535 Glycosyl transferase family 2 4 132 5.6E-28 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 YH65_02335 f41537ecce2edef1b29d78c66b53517d 242 Gene3D G3DSA:3.90.550.10 1 240 8.1E-41 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YH65_09280 1ada7d2b309ab2e4dc427f6ed880ba84 145 SUPERFAMILY SSF49764 16 144 3.56E-42 T 11-10-2018 IPR008978 HSP20-like chaperone YH65_09280 1ada7d2b309ab2e4dc427f6ed880ba84 145 Gene3D G3DSA:2.60.40.790 5 145 5.5E-42 T 11-10-2018 IPR008978 HSP20-like chaperone YH65_09280 1ada7d2b309ab2e4dc427f6ed880ba84 145 Pfam PF00011 Hsp20/alpha crystallin family 45 145 4.3E-29 T 11-10-2018 IPR002068 Alpha crystallin/Hsp20 domain YH65_04915 8887c2f2554962defa7d28ff94b0acc8 341 SMART SM00729 73 276 7.0E-5 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 YH65_04915 8887c2f2554962defa7d28ff94b0acc8 341 PIRSF PIRSF004869 1 314 4.5E-105 T 11-10-2018 IPR016431 Pyruvate-formate lyase-activating enzyme, predicted YH65_04915 8887c2f2554962defa7d28ff94b0acc8 341 TIGRFAM TIGR04337 AmmeMemoSam_rS: AmmeMemoRadiSam system radical SAM enzyme 9 340 1.8E-115 T 11-10-2018 IPR027596 AmmeMemoRadiSam system radical SAM enzyme YH65_04915 8887c2f2554962defa7d28ff94b0acc8 341 SUPERFAMILY SSF102114 48 314 2.49E-37 T 11-10-2018 YH65_04915 8887c2f2554962defa7d28ff94b0acc8 341 Gene3D G3DSA:3.20.20.70 64 287 9.5E-40 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YH65_04915 8887c2f2554962defa7d28ff94b0acc8 341 Pfam PF04055 Radical SAM superfamily 80 234 4.3E-22 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 YH65_07365 9667f50ababcb4b5a5ef99ee6ae37acd 164 Pfam PF03734 L,D-transpeptidase catalytic domain 23 135 2.5E-21 T 11-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 YH65_07365 9667f50ababcb4b5a5ef99ee6ae37acd 164 Gene3D G3DSA:2.40.440.10 22 145 8.6E-30 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like YH65_07365 9667f50ababcb4b5a5ef99ee6ae37acd 164 SUPERFAMILY SSF141523 23 135 8.11E-27 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like YH65_00825 ecdc1f0a458f998f663dcc126710d0b8 405 SMART SM00825 Beta-ketoacyl synthase 4 405 1.3E-11 T 11-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YH65_00825 ecdc1f0a458f998f663dcc126710d0b8 405 SUPERFAMILY SSF53901 211 404 1.23E-64 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 YH65_00825 ecdc1f0a458f998f663dcc126710d0b8 405 Gene3D G3DSA:3.40.47.10 1 253 3.5E-81 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 YH65_00825 ecdc1f0a458f998f663dcc126710d0b8 405 SUPERFAMILY SSF53901 2 249 3.33E-69 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 YH65_00825 ecdc1f0a458f998f663dcc126710d0b8 405 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 2 403 2.6E-174 T 11-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 YH65_00825 ecdc1f0a458f998f663dcc126710d0b8 405 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2 244 1.1E-51 T 11-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal YH65_00825 ecdc1f0a458f998f663dcc126710d0b8 405 Gene3D G3DSA:3.40.47.10 254 394 2.0E-46 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 YH65_00825 ecdc1f0a458f998f663dcc126710d0b8 405 PIRSF PIRSF000447 1 405 2.0E-157 T 11-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 YH65_00825 ecdc1f0a458f998f663dcc126710d0b8 405 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 362 2.0E-29 T 11-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal YH65_07430 3f95d5197bcf720ddd507e35bd593496 114 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 4 114 1.3E-46 T 11-10-2018 IPR004624 PhnA protein YH65_07430 3f95d5197bcf720ddd507e35bd593496 114 SUPERFAMILY SSF57783 3 37 6.12E-15 T 11-10-2018 YH65_07430 3f95d5197bcf720ddd507e35bd593496 114 Pfam PF08274 PhnA Zinc-Ribbon 4 32 5.5E-15 T 11-10-2018 IPR013987 PhnA protein, N-terminal YH65_07430 3f95d5197bcf720ddd507e35bd593496 114 Gene3D G3DSA:2.20.25.10 1 42 3.6E-20 T 11-10-2018 YH65_07430 3f95d5197bcf720ddd507e35bd593496 114 SUPERFAMILY SSF82057 40 114 1.56E-25 T 11-10-2018 YH65_07430 3f95d5197bcf720ddd507e35bd593496 114 Pfam PF03831 PhnA domain 45 114 8.9E-31 T 11-10-2018 IPR013988 PhnA protein, C-terminal YH65_07430 3f95d5197bcf720ddd507e35bd593496 114 Gene3D G3DSA:2.30.30.40 43 114 2.9E-30 T 11-10-2018 YH65_08880 39bf2533013d99238cf414ac77c99a31 217 SUPERFAMILY SSF46894 138 216 3.68E-14 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YH65_08880 39bf2533013d99238cf414ac77c99a31 217 SUPERFAMILY SSF52172 1 165 2.13E-32 T 11-10-2018 IPR011006 CheY-like superfamily YH65_08880 39bf2533013d99238cf414ac77c99a31 217 Pfam PF00072 Response regulator receiver domain 4 111 2.3E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YH65_08880 39bf2533013d99238cf414ac77c99a31 217 SMART SM00448 2 111 3.4E-31 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YH65_08880 39bf2533013d99238cf414ac77c99a31 217 Gene3D G3DSA:1.10.10.10 128 217 4.1E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YH65_08880 39bf2533013d99238cf414ac77c99a31 217 SMART SM00862 144 216 2.5E-16 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YH65_08880 39bf2533013d99238cf414ac77c99a31 217 Pfam PF00486 Transcriptional regulatory protein, C terminal 144 216 7.5E-17 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YH65_08880 39bf2533013d99238cf414ac77c99a31 217 Gene3D G3DSA:3.40.50.2300 1 127 7.2E-29 T 11-10-2018 YH65_02345 3b097e7cb02bb5d79c40a3fe286cb1ba 337 Gene3D G3DSA:3.40.50.300 4 326 9.7E-26 T 11-10-2018 YH65_02345 3b097e7cb02bb5d79c40a3fe286cb1ba 337 SUPERFAMILY SSF52540 8 321 2.04E-18 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_02345 3b097e7cb02bb5d79c40a3fe286cb1ba 337 Pfam PF13469 Sulfotransferase family 10 234 5.5E-7 T 11-10-2018 YH65_04655 244079221f701c2085233b128865aa3c 296 Pfam PF01513 ATP-NAD kinase 67 275 5.0E-45 T 11-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 YH65_04655 244079221f701c2085233b128865aa3c 296 Gene3D G3DSA:3.40.50.10330 39 291 1.2E-81 T 11-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 YH65_04655 244079221f701c2085233b128865aa3c 296 Gene3D G3DSA:2.60.200.30 133 268 1.2E-81 T 11-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 YH65_04655 244079221f701c2085233b128865aa3c 296 SUPERFAMILY SSF111331 16 295 1.2E-77 T 11-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily YH65_04655 244079221f701c2085233b128865aa3c 296 Hamap MF_00361 NAD kinase [nadK]. 14 291 31.311 T 11-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 YH65_03340 373fc89345fe52169289d17e125a4502 395 SUPERFAMILY SSF53335 112 284 4.56E-23 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YH65_03340 373fc89345fe52169289d17e125a4502 395 Gene3D G3DSA:3.40.50.150 93 293 1.5E-45 T 11-10-2018 YH65_03340 373fc89345fe52169289d17e125a4502 395 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 106 282 2.4E-46 T 11-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 YH65_03340 373fc89345fe52169289d17e125a4502 395 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 59 288 25.438 T 11-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 YH65_03340 373fc89345fe52169289d17e125a4502 395 Pfam PF02390 Putative methyltransferase 122 282 3.9E-41 T 11-10-2018 YH65_06425 1bfc9fadfc3574599d477ad96dd9c375 258 Pfam PF14340 Domain of unknown function (DUF4395) 26 160 6.0E-28 T 11-10-2018 IPR025508 Domain of unknown function DUF4395 YH65_05810 89997d53a62049f2fd45e254c46f1bd0 351 Gene3D G3DSA:1.10.1060.20 96 206 3.1E-5 T 11-10-2018 YH65_05810 89997d53a62049f2fd45e254c46f1bd0 351 Gene3D G3DSA:3.10.20.30 2 95 7.5E-21 T 11-10-2018 IPR012675 Beta-grasp domain superfamily YH65_04950 cab5c9ed9d96d3de2f745177287c51e9 317 SMART SM00849 18 210 0.0062 T 11-10-2018 IPR001279 Metallo-beta-lactamase YH65_04950 cab5c9ed9d96d3de2f745177287c51e9 317 Pfam PF12706 Beta-lactamase superfamily domain 32 270 4.9E-10 T 11-10-2018 IPR001279 Metallo-beta-lactamase YH65_04950 cab5c9ed9d96d3de2f745177287c51e9 317 Hamap MF_01818 Ribonuclease BN [rbn]. 1 308 31.517 T 11-10-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 YH65_04950 cab5c9ed9d96d3de2f745177287c51e9 317 Gene3D G3DSA:3.60.15.10 1 308 6.4E-81 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like YH65_04950 cab5c9ed9d96d3de2f745177287c51e9 317 SUPERFAMILY SSF56281 1 308 2.57E-68 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like YH65_09615 7943771169f2bdc42ead8659d0e03c2a 107 Pfam PF00034 Cytochrome c 20 100 2.3E-11 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YH65_09615 7943771169f2bdc42ead8659d0e03c2a 107 Gene3D G3DSA:1.10.760.10 16 100 1.5E-17 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_09615 7943771169f2bdc42ead8659d0e03c2a 107 SUPERFAMILY SSF46626 1 101 4.87E-16 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_04350 8ca2f0ac15ac8593b60fca47bbc2d5af 196 SMART SM00903 20 165 0.0014 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 YH65_04350 8ca2f0ac15ac8593b60fca47bbc2d5af 196 SUPERFAMILY SSF50475 10 188 1.86E-28 T 11-10-2018 YH65_04350 8ca2f0ac15ac8593b60fca47bbc2d5af 196 Pfam PF01613 Flavin reductase like domain 22 161 3.3E-20 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 YH65_04350 8ca2f0ac15ac8593b60fca47bbc2d5af 196 Gene3D G3DSA:2.30.110.10 2 195 1.5E-46 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 YH65_07255 7dda7f321f98763eccf86be1bc28f37a 241 Pfam PF00119 ATP synthase A chain 25 217 3.7E-50 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YH65_07255 7dda7f321f98763eccf86be1bc28f37a 241 PRINTS PR00123 ATP synthase A subunit signature 160 182 1.9E-14 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YH65_07255 7dda7f321f98763eccf86be1bc28f37a 241 PRINTS PR00123 ATP synthase A subunit signature 80 96 1.9E-14 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YH65_07255 7dda7f321f98763eccf86be1bc28f37a 241 PRINTS PR00123 ATP synthase A subunit signature 140 155 1.9E-14 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YH65_07255 7dda7f321f98763eccf86be1bc28f37a 241 PRINTS PR00123 ATP synthase A subunit signature 204 219 1.9E-14 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YH65_07255 7dda7f321f98763eccf86be1bc28f37a 241 SUPERFAMILY SSF81336 74 217 6.54E-35 T 11-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YH65_07255 7dda7f321f98763eccf86be1bc28f37a 241 ProSitePatterns PS00449 ATP synthase a subunit signature. 163 172 - T 11-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YH65_07255 7dda7f321f98763eccf86be1bc28f37a 241 Hamap MF_01393 ATP synthase subunit a [atpB]. 1 224 14.817 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YH65_07255 7dda7f321f98763eccf86be1bc28f37a 241 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 25 219 5.0E-40 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YH65_07255 7dda7f321f98763eccf86be1bc28f37a 241 Gene3D G3DSA:1.20.120.220 72 224 3.9E-39 T 11-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YH65_00850 688f10ccb7328f125371e76fe4d44ee9 398 Gene3D G3DSA:3.60.70.12 10 268 1.6E-81 T 11-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 YH65_00850 688f10ccb7328f125371e76fe4d44ee9 398 Gene3D G3DSA:3.10.20.340 269 398 1.0E-41 T 11-10-2018 YH65_00850 688f10ccb7328f125371e76fe4d44ee9 398 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 398 115.161 T 11-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 YH65_00850 688f10ccb7328f125371e76fe4d44ee9 398 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 36 398 3.0E-122 T 11-10-2018 YH65_00850 688f10ccb7328f125371e76fe4d44ee9 398 Pfam PF01960 ArgJ family 23 398 3.4E-129 T 11-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 YH65_00850 688f10ccb7328f125371e76fe4d44ee9 398 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 13 398 3.1E-116 T 11-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 YH65_00850 688f10ccb7328f125371e76fe4d44ee9 398 SUPERFAMILY SSF56266 16 395 2.22E-118 T 11-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 YH65_06240 b710410678b0285f1a56453b90aadbf2 107 SUPERFAMILY SSF46785 2 83 2.17E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YH65_06240 b710410678b0285f1a56453b90aadbf2 107 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 28 39 6.7E-16 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 YH65_06240 b710410678b0285f1a56453b90aadbf2 107 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 41 56 6.7E-16 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 YH65_06240 b710410678b0285f1a56453b90aadbf2 107 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 56 71 6.7E-16 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 YH65_06240 b710410678b0285f1a56453b90aadbf2 107 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 8 23 6.7E-16 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 YH65_06240 b710410678b0285f1a56453b90aadbf2 107 SMART SM00418 6 84 7.8E-20 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 YH65_06240 b710410678b0285f1a56453b90aadbf2 107 Gene3D G3DSA:1.10.10.10 1 98 1.9E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YH65_06240 b710410678b0285f1a56453b90aadbf2 107 Pfam PF01022 Bacterial regulatory protein, arsR family 13 59 3.6E-13 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 YH65_09745 b62807179c6c707ed2b8b938d78ffc50 57 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 15 47 2.6E-7 T 11-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 YH65_08940 99e716217942b602615d8ce8cb4b510b 401 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 62 398 1.6E-122 T 11-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 YH65_08940 99e716217942b602615d8ce8cb4b510b 401 Pfam PF13840 ACT domain 333 395 5.0E-14 T 11-10-2018 IPR027795 CASTOR, ACT domain YH65_08940 99e716217942b602615d8ce8cb4b510b 401 Gene3D G3DSA:3.40.1160.10 1 252 1.7E-88 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily YH65_08940 99e716217942b602615d8ce8cb4b510b 401 Pfam PF01842 ACT domain 264 318 2.3E-11 T 11-10-2018 IPR002912 ACT domain YH65_08940 99e716217942b602615d8ce8cb4b510b 401 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 1 398 4.9E-140 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 YH65_08940 99e716217942b602615d8ce8cb4b510b 401 ProSitePatterns PS00324 Aspartokinase signature. 4 12 - T 11-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 YH65_08940 99e716217942b602615d8ce8cb4b510b 401 Gene3D G3DSA:3.30.70.260 259 334 5.6E-57 T 11-10-2018 YH65_08940 99e716217942b602615d8ce8cb4b510b 401 SUPERFAMILY SSF55021 246 323 3.9E-20 T 11-10-2018 YH65_08940 99e716217942b602615d8ce8cb4b510b 401 SUPERFAMILY SSF53633 3 242 3.01E-75 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily YH65_08940 99e716217942b602615d8ce8cb4b510b 401 Pfam PF00696 Amino acid kinase family 1 226 1.5E-53 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 YH65_08940 99e716217942b602615d8ce8cb4b510b 401 SUPERFAMILY SSF55021 326 400 5.96E-24 T 11-10-2018 YH65_08940 99e716217942b602615d8ce8cb4b510b 401 Gene3D G3DSA:3.30.70.260 253 399 5.6E-57 T 11-10-2018 YH65_08940 99e716217942b602615d8ce8cb4b510b 401 PIRSF PIRSF000726 1 61 7.6E-21 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 YH65_08940 99e716217942b602615d8ce8cb4b510b 401 PIRSF PIRSF000726 53 401 2.5E-136 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 YH65_02720 1db22c772778109fa2075dfc89baceab 348 Gene3D G3DSA:3.10.310.30 283 346 2.2E-9 T 11-10-2018 YH65_02720 1db22c772778109fa2075dfc89baceab 348 SUPERFAMILY SSF64182 5 345 8.58E-15 T 11-10-2018 IPR038763 DHH phosphoesterase superfamily YH65_09910 bb773f7000a492fc482616295eaf5aae 166 Gene3D G3DSA:3.30.70.990 12 103 7.9E-58 T 11-10-2018 IPR035570 UPF0234, N-terminal YH65_09910 bb773f7000a492fc482616295eaf5aae 166 SUPERFAMILY SSF89963 7 92 2.88E-26 T 11-10-2018 IPR036183 YajQ-like superfamily YH65_09910 bb773f7000a492fc482616295eaf5aae 166 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 4 166 23.118 T 11-10-2018 IPR007551 Protein of unknown function DUF520 YH65_09910 bb773f7000a492fc482616295eaf5aae 166 Pfam PF04461 Protein of unknown function (DUF520) 7 166 1.4E-57 T 11-10-2018 IPR007551 Protein of unknown function DUF520 YH65_09910 bb773f7000a492fc482616295eaf5aae 166 Gene3D G3DSA:3.30.70.860 7 166 7.9E-58 T 11-10-2018 IPR035571 UPF0234-like, C-terminal YH65_09910 bb773f7000a492fc482616295eaf5aae 166 SUPERFAMILY SSF89963 94 166 3.14E-23 T 11-10-2018 IPR036183 YajQ-like superfamily YH65_01430 a40217e57432b1ef6b625285c66b4bcc 630 Pfam PF00534 Glycosyl transferases group 1 446 562 3.1E-7 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 YH65_01430 a40217e57432b1ef6b625285c66b4bcc 630 Gene3D G3DSA:3.40.50.150 11 241 4.3E-15 T 11-10-2018 YH65_01430 a40217e57432b1ef6b625285c66b4bcc 630 Gene3D G3DSA:3.40.50.2000 462 620 2.4E-12 T 11-10-2018 YH65_01430 a40217e57432b1ef6b625285c66b4bcc 630 Gene3D G3DSA:3.40.50.2000 273 461 1.2E-8 T 11-10-2018 YH65_01430 a40217e57432b1ef6b625285c66b4bcc 630 SUPERFAMILY SSF53756 273 627 7.85E-36 T 11-10-2018 YH65_01430 a40217e57432b1ef6b625285c66b4bcc 630 SUPERFAMILY SSF53335 15 237 3.34E-16 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YH65_08840 8dc8e3bca74498582fa28f5f50ced095 340 Pfam PF12281 Nucleotidyltransferase 116 312 1.2E-37 T 11-10-2018 IPR022550 Nucleotidyltransferase 8 YH65_09555 033f7d3079352746d344c951323b0118 270 SUPERFAMILY SSF54862 77 259 1.17E-20 T 11-10-2018 YH65_09555 033f7d3079352746d344c951323b0118 270 Pfam PF12801 4Fe-4S binding domain 67 109 2.4E-14 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YH65_09555 033f7d3079352746d344c951323b0118 270 Pfam PF12801 4Fe-4S binding domain 163 201 2.2E-5 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YH65_09555 033f7d3079352746d344c951323b0118 270 Gene3D G3DSA:3.30.70.20 206 257 1.1E-6 T 11-10-2018 YH65_09555 033f7d3079352746d344c951323b0118 270 Pfam PF13237 4Fe-4S dicluster domain 204 252 3.5E-6 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YH65_09555 033f7d3079352746d344c951323b0118 270 TIGRFAM TIGR02163 napH_: ferredoxin-type protein, NapH/MauN family 6 259 1.1E-100 T 11-10-2018 IPR011886 Ferredoxin-type protein, NapH/MauN family YH65_00860 007e8f9fd30c9a50480591e78c366df5 69 Gene3D G3DSA:2.30.170.40 2 69 3.1E-22 T 11-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_00860 007e8f9fd30c9a50480591e78c366df5 69 SUPERFAMILY SSF143800 1 65 2.35E-25 T 11-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_00860 007e8f9fd30c9a50480591e78c366df5 69 Pfam PF00830 Ribosomal L28 family 3 61 6.5E-22 T 11-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_00860 007e8f9fd30c9a50480591e78c366df5 69 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 57 6.8E-24 T 11-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YH65_00860 007e8f9fd30c9a50480591e78c366df5 69 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 66 20.262 T 11-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YH65_00600 904014429dd7dbba7509e3135a7f970a 229 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 1 229 46.946 T 11-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YH65_00600 904014429dd7dbba7509e3135a7f970a 229 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 4 219 2.8E-40 T 11-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YH65_00600 904014429dd7dbba7509e3135a7f970a 229 Gene3D G3DSA:3.20.20.70 1 228 4.5E-73 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YH65_00600 904014429dd7dbba7509e3135a7f970a 229 ProSitePatterns PS00171 Triosephosphate isomerase active site. 155 165 - T 11-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YH65_00600 904014429dd7dbba7509e3135a7f970a 229 SUPERFAMILY SSF51351 2 227 7.98E-66 T 11-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YH65_00600 904014429dd7dbba7509e3135a7f970a 229 Pfam PF00121 Triosephosphate isomerase 2 227 5.2E-66 T 11-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 YH65_08495 de7f96bed45b57d91ac528204fbb1790 270 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 9 251 9.7E-80 T 11-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 YH65_08495 de7f96bed45b57d91ac528204fbb1790 270 Gene3D G3DSA:3.40.1190.20 1 267 1.3E-88 T 11-10-2018 IPR029056 Ribokinase-like YH65_08495 de7f96bed45b57d91ac528204fbb1790 270 Pfam PF08543 Phosphomethylpyrimidine kinase 16 254 1.5E-80 T 11-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 YH65_08495 de7f96bed45b57d91ac528204fbb1790 270 SUPERFAMILY SSF53613 6 257 1.42E-67 T 11-10-2018 IPR029056 Ribokinase-like YH65_09470 323f92032ae9c43f02312617083b0d6d 225 Gene3D G3DSA:3.40.50.300 13 224 7.0E-52 T 11-10-2018 YH65_09470 323f92032ae9c43f02312617083b0d6d 225 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YH65_09470 323f92032ae9c43f02312617083b0d6d 225 SUPERFAMILY SSF52540 13 221 1.55E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_09470 323f92032ae9c43f02312617083b0d6d 225 SMART SM00382 38 218 1.8E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain YH65_09470 323f92032ae9c43f02312617083b0d6d 225 Pfam PF00005 ABC transporter 30 171 3.4E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YH65_10375 f523d1e7876279fd983414683d954242 138 SUPERFAMILY SSF52833 23 131 8.27E-22 T 11-10-2018 IPR036249 Thioredoxin-like superfamily YH65_10375 f523d1e7876279fd983414683d954242 138 Pfam PF13899 Thioredoxin-like 28 107 2.4E-13 T 11-10-2018 YH65_10375 f523d1e7876279fd983414683d954242 138 Gene3D G3DSA:3.40.30.10 20 134 2.1E-22 T 11-10-2018 YH65_00870 363c88c8d60da45a777805d32e958349 196 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 1 196 34.157 T 11-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 YH65_00870 363c88c8d60da45a777805d32e958349 196 SUPERFAMILY SSF51366 1 194 2.67E-52 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 YH65_00870 363c88c8d60da45a777805d32e958349 196 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 3 191 1.5E-37 T 11-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 YH65_00870 363c88c8d60da45a777805d32e958349 196 Gene3D G3DSA:3.20.20.70 1 196 2.0E-57 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YH65_06350 286375336c12bed60780372b195ba9d3 297 Pfam PF01545 Cation efflux family 15 206 4.6E-47 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 YH65_06350 286375336c12bed60780372b195ba9d3 297 Gene3D G3DSA:1.20.1510.10 12 206 3.1E-44 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily YH65_06350 286375336c12bed60780372b195ba9d3 297 SUPERFAMILY SSF160240 212 287 2.22E-11 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 YH65_06350 286375336c12bed60780372b195ba9d3 297 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 13 287 3.8E-76 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 YH65_06350 286375336c12bed60780372b195ba9d3 297 SUPERFAMILY SSF161111 9 207 1.2E-53 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily YH65_09665 a5e437ca9c6e2c4e48d54752e68f9d08 239 Gene3D G3DSA:2.40.30.170 22 221 2.3E-35 T 11-10-2018 YH65_09665 a5e437ca9c6e2c4e48d54752e68f9d08 239 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 21 233 9.8E-32 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 YH65_09665 a5e437ca9c6e2c4e48d54752e68f9d08 239 Gene3D G3DSA:2.40.50.100 33 165 2.3E-35 T 11-10-2018 YH65_09665 a5e437ca9c6e2c4e48d54752e68f9d08 239 Gene3D G3DSA:1.10.287.470 67 123 2.3E-35 T 11-10-2018 YH65_09665 a5e437ca9c6e2c4e48d54752e68f9d08 239 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 25 219 2.7E-15 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YH65_09665 a5e437ca9c6e2c4e48d54752e68f9d08 239 SUPERFAMILY SSF111369 28 209 2.62E-16 T 11-10-2018 YH65_09180 cd9e8ba0d2c906e889829f8029e5b63b 577 SUPERFAMILY SSF110997 495 563 3.14E-7 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 YH65_09180 cd9e8ba0d2c906e889829f8029e5b63b 577 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 22 459 5.7E-80 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 YH65_09180 cd9e8ba0d2c906e889829f8029e5b63b 577 Pfam PF05036 Sporulation related domain 496 563 7.5E-6 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 YH65_09180 cd9e8ba0d2c906e889829f8029e5b63b 577 SUPERFAMILY SSF56601 35 463 1.38E-72 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like YH65_09180 cd9e8ba0d2c906e889829f8029e5b63b 577 Gene3D G3DSA:3.40.710.10 260 463 3.8E-49 T 11-10-2018 YH65_09180 cd9e8ba0d2c906e889829f8029e5b63b 577 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 343 357 7.8E-20 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 YH65_09180 cd9e8ba0d2c906e889829f8029e5b63b 577 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 59 78 7.8E-20 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 YH65_09180 cd9e8ba0d2c906e889829f8029e5b63b 577 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 284 306 7.8E-20 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 YH65_09180 cd9e8ba0d2c906e889829f8029e5b63b 577 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 358 372 7.8E-20 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 YH65_09180 cd9e8ba0d2c906e889829f8029e5b63b 577 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 419 432 7.8E-20 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 YH65_09180 cd9e8ba0d2c906e889829f8029e5b63b 577 Gene3D G3DSA:3.30.70.1070 497 565 1.3E-5 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 YH65_09180 cd9e8ba0d2c906e889829f8029e5b63b 577 Gene3D G3DSA:3.50.80.20 83 174 3.3E-20 T 11-10-2018 YH65_09180 cd9e8ba0d2c906e889829f8029e5b63b 577 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 49 441 5.2E-62 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 YH65_08035 914f17d78261c6c459a9ef250740a6ed 427 Pfam PF01435 Peptidase family M48 195 394 4.1E-41 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 YH65_08035 914f17d78261c6c459a9ef250740a6ed 427 SUPERFAMILY SSF103473 141 338 6.93E-7 T 11-10-2018 IPR036259 MFS transporter superfamily YH65_08035 914f17d78261c6c459a9ef250740a6ed 427 Gene3D G3DSA:3.30.2010.10 191 273 4.7E-29 T 11-10-2018 YH65_08035 914f17d78261c6c459a9ef250740a6ed 427 Pfam PF16491 CAAX prenyl protease N-terminal, five membrane helices 40 192 2.7E-29 T 11-10-2018 IPR032456 CAAX prenyl protease 1, N-terminal KEGG: 00900+3.4.24.84 YH65_02925 a3bb6deeed73cf0125b84d9adf076179 343 PIRSF PIRSF036407 1 343 2.0E-113 T 11-10-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 YH65_02925 a3bb6deeed73cf0125b84d9adf076179 343 TIGRFAM TIGR00476 selD: selenide, water dikinase 5 310 2.2E-131 T 11-10-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 YH65_02925 a3bb6deeed73cf0125b84d9adf076179 343 SUPERFAMILY SSF56042 162 339 1.14E-48 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily YH65_02925 a3bb6deeed73cf0125b84d9adf076179 343 Pfam PF02769 AIR synthase related protein, C-terminal domain 167 338 2.1E-25 T 11-10-2018 IPR010918 PurM-like, C-terminal domain YH65_02925 a3bb6deeed73cf0125b84d9adf076179 343 Hamap MF_00625 Selenide, water dikinase [selD]. 3 343 42.551 T 11-10-2018 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 YH65_02925 a3bb6deeed73cf0125b84d9adf076179 343 Gene3D G3DSA:3.30.1330.10 1 160 1.1E-45 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily YH65_02925 a3bb6deeed73cf0125b84d9adf076179 343 SUPERFAMILY SSF55326 6 158 4.04E-39 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily YH65_02925 a3bb6deeed73cf0125b84d9adf076179 343 Gene3D G3DSA:3.90.650.10 162 342 2.1E-50 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily YH65_02925 a3bb6deeed73cf0125b84d9adf076179 343 Pfam PF00586 AIR synthase related protein, N-terminal domain 48 155 1.1E-17 T 11-10-2018 IPR016188 PurM-like, N-terminal domain YH65_03175 21c583ed8f409f1a1ee66a81e42d8a87 257 ProSitePatterns PS00902 Glutamate 5-kinase signature. 201 218 - T 11-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 YH65_03175 21c583ed8f409f1a1ee66a81e42d8a87 257 PIRSF PIRSF000729 1 257 2.2E-77 T 11-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 YH65_03175 21c583ed8f409f1a1ee66a81e42d8a87 257 Pfam PF00696 Amino acid kinase family 2 226 4.4E-41 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 YH65_03175 21c583ed8f409f1a1ee66a81e42d8a87 257 Hamap MF_00456 Glutamate 5-kinase [proB]. 2 255 31.405 T 11-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 YH65_03175 21c583ed8f409f1a1ee66a81e42d8a87 257 Gene3D G3DSA:3.40.1160.10 1 252 5.7E-69 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily YH65_03175 21c583ed8f409f1a1ee66a81e42d8a87 257 PRINTS PR00474 Glutamate 5-kinase family signature 70 98 1.9E-40 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 YH65_03175 21c583ed8f409f1a1ee66a81e42d8a87 257 PRINTS PR00474 Glutamate 5-kinase family signature 110 131 1.9E-40 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 YH65_03175 21c583ed8f409f1a1ee66a81e42d8a87 257 PRINTS PR00474 Glutamate 5-kinase family signature 142 169 1.9E-40 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 YH65_03175 21c583ed8f409f1a1ee66a81e42d8a87 257 PRINTS PR00474 Glutamate 5-kinase family signature 203 223 1.9E-40 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 YH65_03175 21c583ed8f409f1a1ee66a81e42d8a87 257 PRINTS PR00474 Glutamate 5-kinase family signature 38 52 1.9E-40 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 YH65_03175 21c583ed8f409f1a1ee66a81e42d8a87 257 TIGRFAM TIGR01027 proB: glutamate 5-kinase 2 254 1.9E-71 T 11-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 YH65_03175 21c583ed8f409f1a1ee66a81e42d8a87 257 SUPERFAMILY SSF53633 2 253 5.11E-61 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily YH65_03445 0aea03708c54fc6f820e0b09b559bf60 278 SUPERFAMILY SSF55021 5 67 7.5E-9 T 11-10-2018 YH65_03445 0aea03708c54fc6f820e0b09b559bf60 278 PIRSF PIRSF036480 2 278 6.4E-109 T 11-10-2018 YH65_03445 0aea03708c54fc6f820e0b09b559bf60 278 Gene3D G3DSA:3.30.70.260 2 77 2.6E-13 T 11-10-2018 YH65_03445 0aea03708c54fc6f820e0b09b559bf60 278 SUPERFAMILY SSF53328 83 278 2.88E-58 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YH65_03445 0aea03708c54fc6f820e0b09b559bf60 278 Gene3D G3DSA:3.40.50.170 82 278 3.2E-69 T 11-10-2018 YH65_03445 0aea03708c54fc6f820e0b09b559bf60 278 Pfam PF00551 Formyl transferase 83 260 4.6E-43 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YH65_03445 0aea03708c54fc6f820e0b09b559bf60 278 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 2 278 43.282 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 YH65_03445 0aea03708c54fc6f820e0b09b559bf60 278 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 6 278 1.9E-113 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 YH65_03445 0aea03708c54fc6f820e0b09b559bf60 278 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 7 33 1.3E-55 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 YH65_03445 0aea03708c54fc6f820e0b09b559bf60 278 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 84 106 1.3E-55 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 YH65_03445 0aea03708c54fc6f820e0b09b559bf60 278 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 39 51 1.3E-55 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 YH65_03445 0aea03708c54fc6f820e0b09b559bf60 278 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 106 133 1.3E-55 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 YH65_03445 0aea03708c54fc6f820e0b09b559bf60 278 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 230 252 1.3E-55 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 YH65_03445 0aea03708c54fc6f820e0b09b559bf60 278 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 252 277 1.3E-55 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 YH65_06770 b0efcddb820a22c8933f2ccf18a65446 448 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 31 444 4.2E-65 T 11-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 YH65_06770 b0efcddb820a22c8933f2ccf18a65446 448 Pfam PF00939 Sodium:sulfate symporter transmembrane region 29 446 2.5E-47 T 11-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 YH65_05765 a6e55d4fd689165c0c736eea0740484d 422 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 418 42.545 T 11-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 YH65_05765 a6e55d4fd689165c0c736eea0740484d 422 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 417 3.0E-173 T 11-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 YH65_05765 a6e55d4fd689165c0c736eea0740484d 422 Gene3D G3DSA:3.65.10.10 6 415 7.7E-159 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 YH65_05765 a6e55d4fd689165c0c736eea0740484d 422 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 408 7.2E-94 T 11-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 YH65_05765 a6e55d4fd689165c0c736eea0740484d 422 Gene3D G3DSA:3.65.10.10 21 232 7.7E-159 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 YH65_05765 a6e55d4fd689165c0c736eea0740484d 422 SUPERFAMILY SSF55205 3 417 4.58E-132 T 11-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 YH65_02615 6c3bbad135fe971fa0ed21e15047483d 79 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 13 78 1.2E-13 T 11-10-2018 IPR008792 Coenzyme PQQ synthesis D YH65_02615 6c3bbad135fe971fa0ed21e15047483d 79 Gene3D G3DSA:1.10.10.1150 6 79 3.2E-7 T 11-10-2018 YH65_07070 21505b616d3a196633470765985c2e01 318 SUPERFAMILY SSF56059 118 295 2.86E-28 T 11-10-2018 YH65_07070 21505b616d3a196633470765985c2e01 318 Gene3D G3DSA:3.40.50.20 5 107 8.4E-96 T 11-10-2018 YH65_07070 21505b616d3a196633470765985c2e01 318 Pfam PF02655 ATP-grasp domain 120 267 4.0E-21 T 11-10-2018 IPR003806 ATP-grasp fold, DUF201-type GO:0005524|GO:0046872 YH65_07070 21505b616d3a196633470765985c2e01 318 Gene3D G3DSA:3.30.470.20 185 285 8.4E-96 T 11-10-2018 YH65_07070 21505b616d3a196633470765985c2e01 318 Gene3D G3DSA:3.30.1490.20 108 184 8.4E-96 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 YH65_05090 e63868734082bf9cfd5411c7a57452cc 168 Gene3D G3DSA:1.10.760.10 106 167 7.8E-7 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_05090 e63868734082bf9cfd5411c7a57452cc 168 SUPERFAMILY SSF46626 10 160 3.2E-8 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_04340 acc44321f5785a5601db6aaa86df7233 402 SUPERFAMILY SSF56524 49 314 2.49E-63 T 11-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 YH65_04340 acc44321f5785a5601db6aaa86df7233 402 Gene3D G3DSA:3.90.420.10 29 282 1.8E-80 T 11-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 YH65_04340 acc44321f5785a5601db6aaa86df7233 402 PRINTS PR00407 Eukaryotic molybdopterin domain signature 200 216 7.3E-21 T 11-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 YH65_04340 acc44321f5785a5601db6aaa86df7233 402 PRINTS PR00407 Eukaryotic molybdopterin domain signature 69 85 7.3E-21 T 11-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 YH65_04340 acc44321f5785a5601db6aaa86df7233 402 PRINTS PR00407 Eukaryotic molybdopterin domain signature 320 332 7.3E-21 T 11-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 YH65_04340 acc44321f5785a5601db6aaa86df7233 402 PRINTS PR00407 Eukaryotic molybdopterin domain signature 281 293 7.3E-21 T 11-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 YH65_04340 acc44321f5785a5601db6aaa86df7233 402 PRINTS PR00407 Eukaryotic molybdopterin domain signature 217 230 7.3E-21 T 11-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 YH65_04340 acc44321f5785a5601db6aaa86df7233 402 PRINTS PR00407 Eukaryotic molybdopterin domain signature 148 163 7.3E-21 T 11-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 YH65_04340 acc44321f5785a5601db6aaa86df7233 402 Pfam PF00174 Oxidoreductase molybdopterin binding domain 88 250 5.6E-48 T 11-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 YH65_04340 acc44321f5785a5601db6aaa86df7233 402 SUPERFAMILY SSF81296 283 400 2.03E-29 T 11-10-2018 IPR014756 Immunoglobulin E-set YH65_04340 acc44321f5785a5601db6aaa86df7233 402 Gene3D G3DSA:2.60.40.650 283 401 2.8E-29 T 11-10-2018 YH65_04340 acc44321f5785a5601db6aaa86df7233 402 Pfam PF03404 Mo-co oxidoreductase dimerisation domain 280 389 5.9E-13 T 11-10-2018 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation GO:0016491|GO:0030151|GO:0055114 Reactome: R-HSA-1614517 YH65_04440 05ba443c3d356bac31189137e12477d2 215 SUPERFAMILY SSF75217 20 194 3.34E-41 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases YH65_04440 05ba443c3d356bac31189137e12477d2 215 Gene3D G3DSA:3.40.1280.10 4 212 9.7E-64 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YH65_04440 05ba443c3d356bac31189137e12477d2 215 Pfam PF00588 SpoU rRNA Methylase family 28 169 8.2E-33 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 YH65_04440 05ba443c3d356bac31189137e12477d2 215 Hamap MF_02060 tRNA (guanosine(18)-2'-O)-methyltransferase [trmH]. 9 205 32.127 T 11-10-2018 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase GO:0008168|GO:0030488 YH65_04670 0517bdb462ab5321f3b0014b5fbcaac5 256 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 255 2.0E-82 T 11-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 YH65_04670 0517bdb462ab5321f3b0014b5fbcaac5 256 Gene3D G3DSA:3.20.20.140 1 255 3.4E-91 T 11-10-2018 YH65_04670 0517bdb462ab5321f3b0014b5fbcaac5 256 Pfam PF01026 TatD related DNase 3 255 7.5E-75 T 11-10-2018 IPR001130 TatD family GO:0016788 YH65_04670 0517bdb462ab5321f3b0014b5fbcaac5 256 SUPERFAMILY SSF51556 2 256 1.45E-81 T 11-10-2018 IPR032466 Metal-dependent hydrolase YH65_04670 0517bdb462ab5321f3b0014b5fbcaac5 256 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 YH65_04670 0517bdb462ab5321f3b0014b5fbcaac5 256 PIRSF PIRSF005902 1 256 3.1E-79 T 11-10-2018 IPR001130 TatD family GO:0016788 YH65_04805 fca582f18126a24fec387bb1d49820ed 271 Pfam PF02666 Phosphatidylserine decarboxylase 53 268 1.8E-53 T 11-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 YH65_04805 fca582f18126a24fec387bb1d49820ed 271 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 47 269 5.4E-55 T 11-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 YH65_01710 9b4cb5468425e49a0ec5825f631fe8a6 247 SUPERFAMILY SSF51366 3 242 7.25E-70 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 YH65_01710 9b4cb5468425e49a0ec5825f631fe8a6 247 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 2 241 4.1E-63 T 11-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 YH65_01710 9b4cb5468425e49a0ec5825f631fe8a6 247 Gene3D G3DSA:3.20.20.70 2 247 1.4E-81 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YH65_01710 9b4cb5468425e49a0ec5825f631fe8a6 247 Pfam PF00290 Tryptophan synthase alpha chain 3 245 1.9E-71 T 11-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 YH65_01710 9b4cb5468425e49a0ec5825f631fe8a6 247 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 1 244 29.671 T 11-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 YH65_01710 9b4cb5468425e49a0ec5825f631fe8a6 247 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 34 47 - T 11-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 YH65_09890 f0befd1bae8ac354fa6c1c8008338b73 142 Gene3D G3DSA:3.40.50.450 1 141 1.6E-39 T 11-10-2018 YH65_09890 f0befd1bae8ac354fa6c1c8008338b73 142 SUPERFAMILY SSF52309 2 138 9.77E-36 T 11-10-2018 YH65_09890 f0befd1bae8ac354fa6c1c8008338b73 142 Pfam PF05014 Nucleoside 2-deoxyribosyltransferase 5 110 2.2E-23 T 11-10-2018 IPR007710 Nucleoside 2-deoxyribosyltransferase Reactome: R-HSA-74259 YH65_00275 8d9052d2964749f91d9add033d86645f 177 Pfam PF00023 Ankyrin repeat 112 141 5.6E-5 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 YH65_00275 8d9052d2964749f91d9add033d86645f 177 SUPERFAMILY SSF48403 6 170 6.63E-32 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily YH65_00275 8d9052d2964749f91d9add033d86645f 177 SMART SM00248 76 105 0.085 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 YH65_00275 8d9052d2964749f91d9add033d86645f 177 SMART SM00248 110 139 1.2E-4 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 YH65_00275 8d9052d2964749f91d9add033d86645f 177 SMART SM00248 42 72 0.068 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 YH65_00275 8d9052d2964749f91d9add033d86645f 177 SMART SM00248 143 172 820.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 YH65_00275 8d9052d2964749f91d9add033d86645f 177 Gene3D G3DSA:1.25.40.20 4 177 5.6E-34 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily YH65_00275 8d9052d2964749f91d9add033d86645f 177 Pfam PF12796 Ankyrin repeats (3 copies) 6 106 1.8E-10 T 11-10-2018 IPR020683 Ankyrin repeat-containing domain YH65_05885 d3eef2a6af6a58f927b0bafbad2448e9 804 SUPERFAMILY SSF51621 470 799 1.77E-91 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 YH65_05885 d3eef2a6af6a58f927b0bafbad2448e9 804 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 18 353 1.0E-109 T 11-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 YH65_05885 d3eef2a6af6a58f927b0bafbad2448e9 804 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 704 722 - T 11-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 YH65_05885 d3eef2a6af6a58f927b0bafbad2448e9 804 Gene3D G3DSA:3.50.30.10 368 487 2.9E-39 T 11-10-2018 YH65_05885 d3eef2a6af6a58f927b0bafbad2448e9 804 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 5 800 0.0 T 11-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 YH65_05885 d3eef2a6af6a58f927b0bafbad2448e9 804 PIRSF PIRSF000854 1 803 0.0 T 11-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 YH65_05885 d3eef2a6af6a58f927b0bafbad2448e9 804 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 488 795 3.6E-56 T 11-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 YH65_05885 d3eef2a6af6a58f927b0bafbad2448e9 804 Pfam PF00391 PEP-utilising enzyme, mobile domain 394 465 1.8E-24 T 11-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 YH65_05885 d3eef2a6af6a58f927b0bafbad2448e9 804 SUPERFAMILY SSF56059 2 394 1.0E-99 T 11-10-2018 YH65_05885 d3eef2a6af6a58f927b0bafbad2448e9 804 Gene3D G3DSA:3.30.470.20 194 367 1.3E-50 T 11-10-2018 YH65_05885 d3eef2a6af6a58f927b0bafbad2448e9 804 Gene3D G3DSA:3.30.1490.20 1 193 3.1E-69 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 YH65_05885 d3eef2a6af6a58f927b0bafbad2448e9 804 Gene3D G3DSA:3.20.20.60 488 798 1.5E-96 T 11-10-2018 YH65_05885 d3eef2a6af6a58f927b0bafbad2448e9 804 SUPERFAMILY SSF52009 357 476 2.22E-32 T 11-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 YH65_05885 d3eef2a6af6a58f927b0bafbad2448e9 804 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 424 435 - T 11-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 YH65_09655 856d8cb64f8dd78e8d2b514398768b13 81 Pfam PF09932 Uncharacterized conserved protein (DUF2164) 4 77 1.2E-28 T 11-10-2018 IPR018680 Protein of unknown function DUF2164 YH65_02750 3c3578493e63908940854bac0bf6c238 97 Pfam PF01817 Chorismate mutase type II 11 87 4.0E-15 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 YH65_02750 3c3578493e63908940854bac0bf6c238 97 Gene3D G3DSA:1.20.59.10 2 96 1.8E-28 T 11-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 YH65_02750 3c3578493e63908940854bac0bf6c238 97 SUPERFAMILY SSF48600 4 88 9.46E-21 T 11-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 YH65_02750 3c3578493e63908940854bac0bf6c238 97 SMART SM00830 11 90 6.6E-18 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 YH65_05595 a5fabbdcb0bd6e2de25913acedcbfbbb 682 Pfam PF09335 SNARE associated Golgi protein 40 165 8.3E-16 T 11-10-2018 IPR032816 SNARE associated Golgi protein YH65_05595 a5fabbdcb0bd6e2de25913acedcbfbbb 682 Pfam PF14067 LssY C-terminus 581 667 6.1E-6 T 11-10-2018 IPR025902 LssY-like C-terminal domain YH65_05595 a5fabbdcb0bd6e2de25913acedcbfbbb 682 SUPERFAMILY SSF48317 262 454 1.7E-33 T 11-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily YH65_05595 a5fabbdcb0bd6e2de25913acedcbfbbb 682 Gene3D G3DSA:1.20.144.10 253 366 1.7E-7 T 11-10-2018 YH65_05595 a5fabbdcb0bd6e2de25913acedcbfbbb 682 Gene3D G3DSA:1.20.144.10 367 473 3.0E-22 T 11-10-2018 YH65_05595 a5fabbdcb0bd6e2de25913acedcbfbbb 682 SMART SM00014 336 446 8.0E-16 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YH65_05595 a5fabbdcb0bd6e2de25913acedcbfbbb 682 Pfam PF01569 PAP2 superfamily 335 451 5.5E-18 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YH65_09895 dfe5f559325b8cd5f57dca003551e0b8 522 Pfam PF13289 SIR2-like domain 132 270 9.6E-14 T 11-10-2018 IPR039444 SIR2-like domain YH65_01075 9a770a65ab8c4d0caeda68a8529241e7 211 Gene3D G3DSA:3.40.190.10 116 211 3.6E-13 T 11-10-2018 YH65_01075 9a770a65ab8c4d0caeda68a8529241e7 211 Gene3D G3DSA:3.40.190.10 1 102 1.8E-15 T 11-10-2018 YH65_01075 9a770a65ab8c4d0caeda68a8529241e7 211 SUPERFAMILY SSF53850 1 210 2.01E-49 T 11-10-2018 YH65_01075 9a770a65ab8c4d0caeda68a8529241e7 211 Pfam PF02621 Menaquinone biosynthesis 4 85 2.9E-5 T 11-10-2018 IPR003773 Menaquinone biosynthesis enzyme YH65_01075 9a770a65ab8c4d0caeda68a8529241e7 211 Pfam PF02621 Menaquinone biosynthesis 106 210 1.8E-11 T 11-10-2018 IPR003773 Menaquinone biosynthesis enzyme YH65_01075 9a770a65ab8c4d0caeda68a8529241e7 211 Hamap MF_00995 Chorismate dehydratase [mqnA]. 2 211 19.408 T 11-10-2018 IPR030868 Chorismate dehydratase GO:0009234|GO:0016829 KEGG: 00130+4.2.1.151|MetaCyc: PWY-7371|MetaCyc: PWY-7374 YH65_06440 ab2514f3191552e38337aeb6df043beb 425 Gene3D G3DSA:1.20.1600.10 27 422 2.0E-32 T 11-10-2018 YH65_06440 ab2514f3191552e38337aeb6df043beb 425 SUPERFAMILY SSF56954 28 419 2.79E-29 T 11-10-2018 YH65_06440 ab2514f3191552e38337aeb6df043beb 425 Pfam PF02321 Outer membrane efflux protein 27 222 4.5E-8 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 YH65_06440 ab2514f3191552e38337aeb6df043beb 425 Pfam PF02321 Outer membrane efflux protein 248 415 5.9E-21 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 YH65_05110 4b7161ff1a8e3c6e89da3b74291d94e3 175 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 124 136 6.0E-24 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 YH65_05110 4b7161ff1a8e3c6e89da3b74291d94e3 175 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 109 124 6.0E-24 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 YH65_05110 4b7161ff1a8e3c6e89da3b74291d94e3 175 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 61 73 6.0E-24 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 YH65_05110 4b7161ff1a8e3c6e89da3b74291d94e3 175 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 137 152 6.0E-24 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 YH65_05110 4b7161ff1a8e3c6e89da3b74291d94e3 175 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 35 50 6.0E-24 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 YH65_05110 4b7161ff1a8e3c6e89da3b74291d94e3 175 PIRSF PIRSF001467 10 171 4.3E-35 T 11-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 YH65_05110 4b7161ff1a8e3c6e89da3b74291d94e3 175 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 56 73 - T 11-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 YH65_05110 4b7161ff1a8e3c6e89da3b74291d94e3 175 SUPERFAMILY SSF50891 20 163 1.46E-45 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily YH65_05110 4b7161ff1a8e3c6e89da3b74291d94e3 175 Gene3D G3DSA:2.40.100.10 16 174 7.5E-50 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily YH65_05110 4b7161ff1a8e3c6e89da3b74291d94e3 175 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 22 162 8.2E-41 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 YH65_09325 0a5dad0e13e87f7195a3c3a4ff1f62ae 80 SUPERFAMILY SSF54814 19 61 2.88E-5 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 YH65_09325 0a5dad0e13e87f7195a3c3a4ff1f62ae 80 Pfam PF13083 KH domain 4 76 1.7E-19 T 11-10-2018 YH65_09325 0a5dad0e13e87f7195a3c3a4ff1f62ae 80 Gene3D G3DSA:3.30.300.20 3 80 1.4E-5 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta YH65_08230 6ce6099f7fd074690be1729bc14b4a84 417 SUPERFAMILY SSF81901 270 413 4.01E-41 T 11-10-2018 YH65_08230 6ce6099f7fd074690be1729bc14b4a84 417 Pfam PF08238 Sel1 repeat 194 229 5.6E-5 T 11-10-2018 IPR006597 Sel1-like repeat YH65_08230 6ce6099f7fd074690be1729bc14b4a84 417 Pfam PF08238 Sel1 repeat 370 405 1.3E-8 T 11-10-2018 IPR006597 Sel1-like repeat YH65_08230 6ce6099f7fd074690be1729bc14b4a84 417 Pfam PF08238 Sel1 repeat 335 369 1.2E-8 T 11-10-2018 IPR006597 Sel1-like repeat YH65_08230 6ce6099f7fd074690be1729bc14b4a84 417 Pfam PF08238 Sel1 repeat 269 297 2.3 T 11-10-2018 IPR006597 Sel1-like repeat YH65_08230 6ce6099f7fd074690be1729bc14b4a84 417 Pfam PF08238 Sel1 repeat 15 48 0.006 T 11-10-2018 IPR006597 Sel1-like repeat YH65_08230 6ce6099f7fd074690be1729bc14b4a84 417 Pfam PF08238 Sel1 repeat 231 264 1.5E-5 T 11-10-2018 IPR006597 Sel1-like repeat YH65_08230 6ce6099f7fd074690be1729bc14b4a84 417 Pfam PF08238 Sel1 repeat 158 192 5.9E-8 T 11-10-2018 IPR006597 Sel1-like repeat YH65_08230 6ce6099f7fd074690be1729bc14b4a84 417 Pfam PF08238 Sel1 repeat 50 84 1.2E-13 T 11-10-2018 IPR006597 Sel1-like repeat YH65_08230 6ce6099f7fd074690be1729bc14b4a84 417 Pfam PF08238 Sel1 repeat 298 333 6.7E-11 T 11-10-2018 IPR006597 Sel1-like repeat YH65_08230 6ce6099f7fd074690be1729bc14b4a84 417 Pfam PF08238 Sel1 repeat 122 151 1.9E-6 T 11-10-2018 IPR006597 Sel1-like repeat YH65_08230 6ce6099f7fd074690be1729bc14b4a84 417 Pfam PF08238 Sel1 repeat 87 120 1.5E-5 T 11-10-2018 IPR006597 Sel1-like repeat YH65_08230 6ce6099f7fd074690be1729bc14b4a84 417 Gene3D G3DSA:1.25.40.10 152 279 7.4E-35 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YH65_08230 6ce6099f7fd074690be1729bc14b4a84 417 Gene3D G3DSA:1.25.40.10 1 151 2.7E-49 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YH65_08230 6ce6099f7fd074690be1729bc14b4a84 417 Gene3D G3DSA:1.25.40.10 280 416 2.5E-51 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YH65_08230 6ce6099f7fd074690be1729bc14b4a84 417 SMART SM00671 266 297 0.018 T 11-10-2018 IPR006597 Sel1-like repeat YH65_08230 6ce6099f7fd074690be1729bc14b4a84 417 SMART SM00671 298 333 2.9E-13 T 11-10-2018 IPR006597 Sel1-like repeat YH65_08230 6ce6099f7fd074690be1729bc14b4a84 417 SMART SM00671 13 48 1.3E-4 T 11-10-2018 IPR006597 Sel1-like repeat YH65_08230 6ce6099f7fd074690be1729bc14b4a84 417 SMART SM00671 334 369 1.2E-10 T 11-10-2018 IPR006597 Sel1-like repeat YH65_08230 6ce6099f7fd074690be1729bc14b4a84 417 SMART SM00671 193 229 9.0E-6 T 11-10-2018 IPR006597 Sel1-like repeat YH65_08230 6ce6099f7fd074690be1729bc14b4a84 417 SMART SM00671 85 120 3.4E-7 T 11-10-2018 IPR006597 Sel1-like repeat YH65_08230 6ce6099f7fd074690be1729bc14b4a84 417 SMART SM00671 49 84 2.7E-13 T 11-10-2018 IPR006597 Sel1-like repeat YH65_08230 6ce6099f7fd074690be1729bc14b4a84 417 SMART SM00671 121 156 2.3E-7 T 11-10-2018 IPR006597 Sel1-like repeat YH65_08230 6ce6099f7fd074690be1729bc14b4a84 417 SMART SM00671 230 265 3.2E-5 T 11-10-2018 IPR006597 Sel1-like repeat YH65_08230 6ce6099f7fd074690be1729bc14b4a84 417 SMART SM00671 157 192 1.3E-10 T 11-10-2018 IPR006597 Sel1-like repeat YH65_08230 6ce6099f7fd074690be1729bc14b4a84 417 SMART SM00671 370 405 2.7E-11 T 11-10-2018 IPR006597 Sel1-like repeat YH65_08230 6ce6099f7fd074690be1729bc14b4a84 417 SUPERFAMILY SSF81901 3 164 1.4E-42 T 11-10-2018 YH65_08230 6ce6099f7fd074690be1729bc14b4a84 417 SUPERFAMILY SSF81901 154 276 4.71E-28 T 11-10-2018 YH65_05335 9f390d1bad3b1b2829bb4c3032d83b2b 556 PIRSF PIRSF006429 6 187 1.5E-12 T 11-10-2018 IPR024188 Glutamate synthase large subunit-like protein YH65_05335 9f390d1bad3b1b2829bb4c3032d83b2b 556 PIRSF PIRSF006429 260 556 1.2E-74 T 11-10-2018 IPR024188 Glutamate synthase large subunit-like protein YH65_05335 9f390d1bad3b1b2829bb4c3032d83b2b 556 Pfam PF01645 Conserved region in glutamate synthase 121 542 5.9E-57 T 11-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 YH65_05335 9f390d1bad3b1b2829bb4c3032d83b2b 556 SUPERFAMILY SSF51395 13 551 1.62E-71 T 11-10-2018 YH65_10765 f90c2a8d06d22e7d30538abbd798ca22 490 PRINTS PR00175 Sodium/alanine symporter signature 332 350 5.7E-47 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 YH65_10765 f90c2a8d06d22e7d30538abbd798ca22 490 PRINTS PR00175 Sodium/alanine symporter signature 214 232 5.7E-47 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 YH65_10765 f90c2a8d06d22e7d30538abbd798ca22 490 PRINTS PR00175 Sodium/alanine symporter signature 384 406 5.7E-47 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 YH65_10765 f90c2a8d06d22e7d30538abbd798ca22 490 PRINTS PR00175 Sodium/alanine symporter signature 242 261 5.7E-47 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 YH65_10765 f90c2a8d06d22e7d30538abbd798ca22 490 PRINTS PR00175 Sodium/alanine symporter signature 113 135 5.7E-47 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 YH65_10765 f90c2a8d06d22e7d30538abbd798ca22 490 PRINTS PR00175 Sodium/alanine symporter signature 443 463 5.7E-47 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 YH65_10765 f90c2a8d06d22e7d30538abbd798ca22 490 TIGRFAM TIGR00835 agcS: amino acid carrier protein 41 474 3.3E-120 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 YH65_10765 f90c2a8d06d22e7d30538abbd798ca22 490 Pfam PF01235 Sodium:alanine symporter family 79 483 1.1E-124 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 YH65_08295 3a8084fa5754cebcbb5884416edd131b 727 Pfam PF03971 Monomeric isocitrate dehydrogenase 5 725 0.0 T 11-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 YH65_08295 3a8084fa5754cebcbb5884416edd131b 727 SUPERFAMILY SSF53659 3 726 0.0 T 11-10-2018 YH65_08295 3a8084fa5754cebcbb5884416edd131b 727 PIRSF PIRSF009407 1 727 0.0 T 11-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 YH65_08295 3a8084fa5754cebcbb5884416edd131b 727 Gene3D G3DSA:3.40.718.10 399 648 9.6E-7 T 11-10-2018 YH65_08295 3a8084fa5754cebcbb5884416edd131b 727 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 3 727 0.0 T 11-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 YH65_02230 2c8dcb17fac9389579b504d27b838768 331 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 81 285 3.6E-46 T 11-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 YH65_02230 2c8dcb17fac9389579b504d27b838768 331 TIGRFAM TIGR02193 heptsyl_trn_I: lipopolysaccharide heptosyltransferase I 2 306 1.1E-86 T 11-10-2018 IPR011908 Lipopolysaccharide heptosyltransferase I GO:0008920|GO:0009244 YH65_02230 2c8dcb17fac9389579b504d27b838768 331 Gene3D G3DSA:3.40.50.2000 1 156 1.8E-46 T 11-10-2018 YH65_02230 2c8dcb17fac9389579b504d27b838768 331 SUPERFAMILY SSF53756 1 328 5.1E-68 T 11-10-2018 YH65_02230 2c8dcb17fac9389579b504d27b838768 331 Gene3D G3DSA:3.40.50.2000 171 305 3.0E-31 T 11-10-2018 YH65_04015 61eb1fda44ac4af5bcdcb99c4889a41d 311 SUPERFAMILY SSF53271 69 301 7.49E-64 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like YH65_04015 61eb1fda44ac4af5bcdcb99c4889a41d 311 Gene3D G3DSA:3.40.50.2020 7 297 6.5E-126 T 11-10-2018 YH65_04015 61eb1fda44ac4af5bcdcb99c4889a41d 311 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 4 309 5.4E-125 T 11-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 YH65_04015 61eb1fda44ac4af5bcdcb99c4889a41d 311 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 128 143 - T 11-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 YH65_04015 61eb1fda44ac4af5bcdcb99c4889a41d 311 Pfam PF14572 Phosphoribosyl synthetase-associated domain 198 308 1.7E-27 T 11-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 YH65_04015 61eb1fda44ac4af5bcdcb99c4889a41d 311 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 5 120 7.5E-51 T 11-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 YH65_04015 61eb1fda44ac4af5bcdcb99c4889a41d 311 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 4 309 48.341 T 11-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 YH65_04015 61eb1fda44ac4af5bcdcb99c4889a41d 311 Gene3D G3DSA:3.40.50.2020 147 285 6.5E-126 T 11-10-2018 YH65_04015 61eb1fda44ac4af5bcdcb99c4889a41d 311 SMART SM01400 4 120 3.3E-80 T 11-10-2018 YH65_00180 7cb84d0fec1617c497d63d4c4aef7138 201 Pfam PF00156 Phosphoribosyl transferase domain 37 146 8.4E-15 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 YH65_00180 7cb84d0fec1617c497d63d4c4aef7138 201 TIGRFAM TIGR01367 pyrE_Therm: orotate phosphoribosyltransferase 2 200 5.5E-76 T 11-10-2018 IPR006273 Orotate phosphoribosyltransferase, bacterial GO:0004588|GO:0019856 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 YH65_00180 7cb84d0fec1617c497d63d4c4aef7138 201 SUPERFAMILY SSF53271 7 193 5.77E-41 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like YH65_00180 7cb84d0fec1617c497d63d4c4aef7138 201 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 201 25.269 T 11-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 YH65_00180 7cb84d0fec1617c497d63d4c4aef7138 201 Gene3D G3DSA:3.40.50.2020 1 201 1.7E-62 T 11-10-2018 YH65_00245 601a464c7eaf856ccde2935c5e945b75 86 SUPERFAMILY SSF64307 7 74 1.16E-6 T 11-10-2018 IPR036868 TusA-like domain superfamily YH65_00245 601a464c7eaf856ccde2935c5e945b75 86 Pfam PF10006 Uncharacterized conserved protein (DUF2249) 9 74 1.7E-8 T 11-10-2018 IPR018720 Domain of unknown function DUF2249 YH65_10895 9cd112762bcbad0d3b41e7f5d068258f 103 Hamap MF_01537 Pyrimidine/purine nucleoside phosphorylase [ppnP]. 10 103 29.348 T 11-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 YH65_10895 9cd112762bcbad0d3b41e7f5d068258f 103 Pfam PF06865 Protein of unknown function (DUF1255) 13 102 3.8E-39 T 11-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 YH65_10895 9cd112762bcbad0d3b41e7f5d068258f 103 Gene3D G3DSA:2.60.120.10 1 103 2.6E-42 T 11-10-2018 IPR014710 RmlC-like jelly roll fold YH65_10895 9cd112762bcbad0d3b41e7f5d068258f 103 SUPERFAMILY SSF51182 12 103 2.92E-36 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily YH65_03990 45b55852026307da07398d84f963a93a 165 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 117 128 - T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 YH65_03990 45b55852026307da07398d84f963a93a 165 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 35 160 9.9E-26 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 YH65_03990 45b55852026307da07398d84f963a93a 165 SUPERFAMILY SSF55083 31 158 1.7E-38 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 YH65_03990 45b55852026307da07398d84f963a93a 165 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 34 160 1.1E-35 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 YH65_03990 45b55852026307da07398d84f963a93a 165 Gene3D G3DSA:3.30.70.560 30 165 1.1E-37 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 YH65_03130 30950818879d44525b2da7ff466e0127 70 Pfam PF02609 Exonuclease VII small subunit 6 56 9.3E-13 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 YH65_03130 30950818879d44525b2da7ff466e0127 70 SUPERFAMILY SSF116842 2 63 4.58E-13 T 11-10-2018 YH65_03130 30950818879d44525b2da7ff466e0127 70 Gene3D G3DSA:1.10.287.1040 1 69 4.8E-11 T 11-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 YH65_03130 30950818879d44525b2da7ff466e0127 70 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 5 65 10.724 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 YH65_03130 30950818879d44525b2da7ff466e0127 70 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 5 60 3.6E-15 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 YH65_05700 811fc3b37e2551e6a9ae07011e3e2bba 128 Pfam PF04191 Phospholipid methyltransferase 16 104 6.7E-13 T 11-10-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 YH65_05700 811fc3b37e2551e6a9ae07011e3e2bba 128 Gene3D G3DSA:1.20.120.1630 2 128 1.4E-23 T 11-10-2018 YH65_06015 ac5d681db288269b1eb010717f2779b8 104 Pfam PF04341 Protein of unknown function, DUF485 11 97 5.6E-36 T 11-10-2018 IPR007436 Protein of unknown function DUF485 YH65_01865 aaa62701ccbce573f65d3290ac436d40 178 Gene3D G3DSA:2.40.240.10 2 89 9.3E-16 T 11-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 YH65_01865 aaa62701ccbce573f65d3290ac436d40 178 SUPERFAMILY SSF50715 6 177 3.14E-41 T 11-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 YH65_01865 aaa62701ccbce573f65d3290ac436d40 178 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 2 87 2.0E-27 T 11-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 YH65_01865 aaa62701ccbce573f65d3290ac436d40 178 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 2 176 1.1E-41 T 11-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 YH65_01865 aaa62701ccbce573f65d3290ac436d40 178 Pfam PF01386 Ribosomal L25p family 2 87 2.3E-16 T 11-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 YH65_01865 aaa62701ccbce573f65d3290ac436d40 178 Gene3D G3DSA:2.170.120.20 94 178 3.1E-14 T 11-10-2018 IPR037121 Ribosomal protein L25, C-terminal YH65_01865 aaa62701ccbce573f65d3290ac436d40 178 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 100 177 3.4E-15 T 11-10-2018 IPR020057 Ribosomal protein L25, beta domain YH65_08965 70024015d3f1632fbe15dd85b33dd5c5 350 SUPERFAMILY SSF111337 14 350 9.29E-111 T 11-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 YH65_08965 70024015d3f1632fbe15dd85b33dd5c5 350 Gene3D G3DSA:2.40.10.240 73 180 4.5E-101 T 11-10-2018 YH65_08965 70024015d3f1632fbe15dd85b33dd5c5 350 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 10 350 39.854 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 YH65_08965 70024015d3f1632fbe15dd85b33dd5c5 350 Pfam PF02547 Queuosine biosynthesis protein 13 349 2.0E-109 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 YH65_08965 70024015d3f1632fbe15dd85b33dd5c5 350 Gene3D G3DSA:3.40.1780.10 24 349 4.5E-101 T 11-10-2018 YH65_08965 70024015d3f1632fbe15dd85b33dd5c5 350 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 12 350 1.0E-116 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 YH65_10055 595f97fcbd6d44218cf23bfa8523ba05 317 Gene3D G3DSA:3.40.50.970 101 315 6.6E-62 T 11-10-2018 YH65_10055 595f97fcbd6d44218cf23bfa8523ba05 317 Gene3D G3DSA:3.40.50.970 3 100 9.1E-9 T 11-10-2018 YH65_10055 595f97fcbd6d44218cf23bfa8523ba05 317 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 52 221 5.5E-26 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 YH65_10055 595f97fcbd6d44218cf23bfa8523ba05 317 SUPERFAMILY SSF52518 15 314 1.83E-67 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold YH65_07830 5599eb59ab9971fd8dd9cbc31e7990b5 120 Pfam PF00034 Cytochrome c 2 106 4.8E-5 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YH65_07830 5599eb59ab9971fd8dd9cbc31e7990b5 120 Gene3D G3DSA:1.10.760.10 1 110 2.8E-7 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_07830 5599eb59ab9971fd8dd9cbc31e7990b5 120 SUPERFAMILY SSF46626 2 110 6.55E-12 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_10535 99fa57e7066fb045641ce2fbcc049e26 124 SMART SM00671 40 75 2.0E-8 T 11-10-2018 IPR006597 Sel1-like repeat YH65_10535 99fa57e7066fb045641ce2fbcc049e26 124 SMART SM00671 76 111 1.1E-8 T 11-10-2018 IPR006597 Sel1-like repeat YH65_10535 99fa57e7066fb045641ce2fbcc049e26 124 SUPERFAMILY SSF81901 21 117 3.01E-27 T 11-10-2018 YH65_10535 99fa57e7066fb045641ce2fbcc049e26 124 Pfam PF08238 Sel1 repeat 23 36 15.0 T 11-10-2018 IPR006597 Sel1-like repeat YH65_10535 99fa57e7066fb045641ce2fbcc049e26 124 Pfam PF08238 Sel1 repeat 42 74 1.9E-5 T 11-10-2018 IPR006597 Sel1-like repeat YH65_10535 99fa57e7066fb045641ce2fbcc049e26 124 Pfam PF08238 Sel1 repeat 78 110 2.5E-6 T 11-10-2018 IPR006597 Sel1-like repeat YH65_10535 99fa57e7066fb045641ce2fbcc049e26 124 Gene3D G3DSA:1.25.40.10 10 123 5.4E-29 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YH65_03665 e28cf0391ac808b3698f04d038a3c298 219 Gene3D G3DSA:1.10.10.10 123 219 2.6E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YH65_03665 e28cf0391ac808b3698f04d038a3c298 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 217 2.0E-20 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YH65_03665 e28cf0391ac808b3698f04d038a3c298 219 SUPERFAMILY SSF46894 122 217 1.67E-23 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YH65_03665 e28cf0391ac808b3698f04d038a3c298 219 SMART SM00862 142 217 4.6E-20 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YH65_03665 e28cf0391ac808b3698f04d038a3c298 219 Gene3D G3DSA:3.40.50.2300 1 122 2.6E-8 T 11-10-2018 YH65_08945 0eef39fc77fd5faf13d6822f22ffa4be 157 Pfam PF00293 NUDIX domain 7 146 3.0E-23 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 YH65_08945 0eef39fc77fd5faf13d6822f22ffa4be 157 SUPERFAMILY SSF55811 5 151 2.84E-25 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 YH65_08945 0eef39fc77fd5faf13d6822f22ffa4be 157 Gene3D G3DSA:3.90.79.10 1 154 2.5E-39 T 11-10-2018 YH65_08945 0eef39fc77fd5faf13d6822f22ffa4be 157 PRINTS PR00502 NUDIX hydrolase family signature 52 67 5.3E-7 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 YH65_08945 0eef39fc77fd5faf13d6822f22ffa4be 157 PRINTS PR00502 NUDIX hydrolase family signature 38 52 5.3E-7 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 YH65_08945 0eef39fc77fd5faf13d6822f22ffa4be 157 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 30.832 T 11-10-2018 IPR022927 RNA pyrophosphohydrolase RppH YH65_08945 0eef39fc77fd5faf13d6822f22ffa4be 157 ProSitePatterns PS00893 Nudix box signature. 43 64 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 YH65_08750 24a66acc8c1c5513cd26a9ea6b48159f 155 Pfam PF02635 DsrE/DsrF-like family 24 151 1.2E-13 T 11-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein YH65_08750 24a66acc8c1c5513cd26a9ea6b48159f 155 Gene3D G3DSA:3.40.1260.10 20 152 3.6E-15 T 11-10-2018 IPR027396 DsrEFH-like YH65_08750 24a66acc8c1c5513cd26a9ea6b48159f 155 SUPERFAMILY SSF75169 23 152 2.82E-15 T 11-10-2018 IPR027396 DsrEFH-like YH65_10565 55ef67e7a8a90deffac5649dc5c7a489 196 Pfam PF00573 Ribosomal protein L4/L1 family 16 194 2.5E-54 T 11-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 YH65_10565 55ef67e7a8a90deffac5649dc5c7a489 196 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 1 196 25.744 T 11-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_10565 55ef67e7a8a90deffac5649dc5c7a489 196 Gene3D G3DSA:3.40.1370.10 1 196 2.7E-57 T 11-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 YH65_10565 55ef67e7a8a90deffac5649dc5c7a489 196 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 16 193 2.7E-59 T 11-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_10565 55ef67e7a8a90deffac5649dc5c7a489 196 SUPERFAMILY SSF52166 6 194 1.96E-57 T 11-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 YH65_08890 53dab8fea86a5cd3ea7d10a42d60614b 450 TIGRFAM TIGR01358 DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase 4 443 6.7E-207 T 11-10-2018 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 YH65_08890 53dab8fea86a5cd3ea7d10a42d60614b 450 Pfam PF01474 Class-II DAHP synthetase family 4 441 3.5E-200 T 11-10-2018 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 YH65_08890 53dab8fea86a5cd3ea7d10a42d60614b 450 Gene3D G3DSA:3.20.20.70 179 446 1.1E-100 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YH65_08890 53dab8fea86a5cd3ea7d10a42d60614b 450 SUPERFAMILY SSF51569 2 445 7.32E-194 T 11-10-2018 YH65_10855 6dece4977abad50395beb73542e406c4 285 SUPERFAMILY SSF53335 10 262 7.16E-51 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YH65_10855 6dece4977abad50395beb73542e406c4 285 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 8 261 43.662 T 11-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 YH65_10855 6dece4977abad50395beb73542e406c4 285 Gene3D G3DSA:3.40.50.150 2 196 1.9E-50 T 11-10-2018 YH65_10855 6dece4977abad50395beb73542e406c4 285 Pfam PF00398 Ribosomal RNA adenine dimethylase 12 237 2.3E-42 T 11-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm YH65_10855 6dece4977abad50395beb73542e406c4 285 SMART SM00650 24 195 3.0E-52 T 11-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 YH65_10855 6dece4977abad50395beb73542e406c4 285 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 10 259 2.3E-65 T 11-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 YH65_10855 6dece4977abad50395beb73542e406c4 285 Gene3D G3DSA:1.10.8.100 197 264 3.1E-8 T 11-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 YH65_02025 9bbb43feae1cb03a400d5ec933bc8476 334 SMART SM00327 85 254 3.1E-9 T 11-10-2018 IPR002035 von Willebrand factor, type A YH65_02025 9bbb43feae1cb03a400d5ec933bc8476 334 Pfam PF13519 von Willebrand factor type A domain 89 193 4.7E-18 T 11-10-2018 IPR002035 von Willebrand factor, type A YH65_02025 9bbb43feae1cb03a400d5ec933bc8476 334 Gene3D G3DSA:3.40.50.410 79 285 5.4E-34 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily YH65_02025 9bbb43feae1cb03a400d5ec933bc8476 334 SUPERFAMILY SSF53300 86 278 6.23E-20 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily YH65_06445 38948618b2bb9404a502b63a2c01cef9 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 5.9E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YH65_06445 38948618b2bb9404a502b63a2c01cef9 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 5.9E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YH65_06445 38948618b2bb9404a502b63a2c01cef9 218 SUPERFAMILY SSF48498 84 210 2.16E-13 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily YH65_06445 38948618b2bb9404a502b63a2c01cef9 218 Gene3D G3DSA:1.10.357.10 2 209 7.0E-42 T 11-10-2018 YH65_06445 38948618b2bb9404a502b63a2c01cef9 218 SUPERFAMILY SSF46689 5 85 1.49E-18 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 YH65_06445 38948618b2bb9404a502b63a2c01cef9 218 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 63 3.4E-15 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YH65_06445 38948618b2bb9404a502b63a2c01cef9 218 ProSitePatterns PS01081 TetR-type HTH domain signature. 29 59 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site YH65_07865 fec4cbb8703c3e1bf1c5e7d3e5545b07 293 Gene3D G3DSA:3.40.50.1980 186 293 6.8E-14 T 11-10-2018 YH65_07865 fec4cbb8703c3e1bf1c5e7d3e5545b07 293 SUPERFAMILY SSF53807 12 291 1.67E-62 T 11-10-2018 YH65_07865 fec4cbb8703c3e1bf1c5e7d3e5545b07 293 Pfam PF01297 Zinc-uptake complex component A periplasmic 21 270 1.6E-42 T 11-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 YH65_07865 fec4cbb8703c3e1bf1c5e7d3e5545b07 293 Gene3D G3DSA:3.40.50.1980 17 184 5.1E-35 T 11-10-2018 YH65_09035 05b345c9df84d0a6d86a996af0929a21 480 Pfam PF00199 Catalase 7 387 5.7E-194 T 11-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 YH65_09035 05b345c9df84d0a6d86a996af0929a21 480 PIRSF PIRSF038928 1 480 4.6E-220 T 11-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 YH65_09035 05b345c9df84d0a6d86a996af0929a21 480 Gene3D G3DSA:2.40.180.10 1 480 2.1E-225 T 11-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 YH65_09035 05b345c9df84d0a6d86a996af0929a21 480 Pfam PF06628 Catalase-related immune-responsive 415 476 7.0E-18 T 11-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 YH65_09035 05b345c9df84d0a6d86a996af0929a21 480 PRINTS PR00067 Catalase signature 104 121 4.7E-74 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 YH65_09035 05b345c9df84d0a6d86a996af0929a21 480 PRINTS PR00067 Catalase signature 288 315 4.7E-74 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 YH65_09035 05b345c9df84d0a6d86a996af0929a21 480 PRINTS PR00067 Catalase signature 83 101 4.7E-74 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 YH65_09035 05b345c9df84d0a6d86a996af0929a21 480 PRINTS PR00067 Catalase signature 123 141 4.7E-74 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 YH65_09035 05b345c9df84d0a6d86a996af0929a21 480 PRINTS PR00067 Catalase signature 20 43 4.7E-74 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 YH65_09035 05b345c9df84d0a6d86a996af0929a21 480 PRINTS PR00067 Catalase signature 320 346 4.7E-74 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 YH65_09035 05b345c9df84d0a6d86a996af0929a21 480 ProSitePatterns PS00438 Catalase proximal active site signature. 43 59 - T 11-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 YH65_09035 05b345c9df84d0a6d86a996af0929a21 480 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 333 341 - T 11-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 YH65_09035 05b345c9df84d0a6d86a996af0929a21 480 SMART SM01060 7 391 1.3E-284 T 11-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 YH65_09035 05b345c9df84d0a6d86a996af0929a21 480 SUPERFAMILY SSF56634 5 477 7.33E-207 T 11-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 YH65_07895 702cc2fb910e0e7aa4f5c3d3e9ed6a65 140 Gene3D G3DSA:3.30.1490.190 82 139 4.1E-12 T 11-10-2018 YH65_07895 702cc2fb910e0e7aa4f5c3d3e9ed6a65 140 SUPERFAMILY SSF46785 3 132 6.8E-29 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YH65_07895 702cc2fb910e0e7aa4f5c3d3e9ed6a65 140 Gene3D G3DSA:1.10.10.10 1 81 2.6E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YH65_07895 702cc2fb910e0e7aa4f5c3d3e9ed6a65 140 Pfam PF01475 Ferric uptake regulator family 10 128 1.1E-28 T 11-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 YH65_03150 18c34933f7c217fc6f526dbfd694119e 131 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 100 118 - T 11-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 YH65_03150 18c34933f7c217fc6f526dbfd694119e 131 SUPERFAMILY SSF55298 3 125 2.36E-46 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 YH65_03150 18c34933f7c217fc6f526dbfd694119e 131 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 123 9.7E-49 T 11-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 YH65_03150 18c34933f7c217fc6f526dbfd694119e 131 Pfam PF01042 Endoribonuclease L-PSP 8 122 5.6E-42 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 YH65_03150 18c34933f7c217fc6f526dbfd694119e 131 Gene3D G3DSA:3.30.1330.40 1 128 8.1E-51 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 YH65_07860 106b7e9190c621e549d6d8336aab8165 374 SUPERFAMILY SSF56935 82 347 2.29E-10 T 11-10-2018 YH65_07515 20e4dba1c7681bf84c2ac0d88e27dc3b 485 Gene3D G3DSA:3.90.190.20 362 478 3.8E-8 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 YH65_07515 20e4dba1c7681bf84c2ac0d88e27dc3b 485 Pfam PF08245 Mur ligase middle domain 158 343 1.2E-23 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 YH65_07515 20e4dba1c7681bf84c2ac0d88e27dc3b 485 Gene3D G3DSA:3.40.1190.10 140 360 6.2E-40 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 YH65_07515 20e4dba1c7681bf84c2ac0d88e27dc3b 485 SUPERFAMILY SSF53244 363 477 1.01E-17 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 YH65_07515 20e4dba1c7681bf84c2ac0d88e27dc3b 485 SUPERFAMILY SSF53623 152 360 3.66E-33 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 YH65_06545 c77e9d740e8f2a1da7a0f1fa96978d87 211 SUPERFAMILY SSF69572 2 211 2.62E-43 T 11-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 YH65_06545 c77e9d740e8f2a1da7a0f1fa96978d87 211 Pfam PF00899 ThiF family 3 207 1.6E-26 T 11-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 YH65_06545 c77e9d740e8f2a1da7a0f1fa96978d87 211 Gene3D G3DSA:3.40.50.720 1 211 7.7E-46 T 11-10-2018 YH65_06130 d40d5a5c77ad815ddceca1cbe0e07b9f 285 Pfam PF12697 Alpha/beta hydrolase family 78 202 4.8E-11 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 YH65_06130 d40d5a5c77ad815ddceca1cbe0e07b9f 285 SUPERFAMILY SSF53474 13 281 5.41E-32 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold YH65_06130 d40d5a5c77ad815ddceca1cbe0e07b9f 285 Gene3D G3DSA:3.40.50.1820 33 282 3.9E-29 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold YH65_07400 cfac7fcfd2cbdd13d64ac7b6c6579e91 144 SMART SM01235 9 140 1.2E-62 T 11-10-2018 IPR025992 Haem-binding domain YH65_07400 cfac7fcfd2cbdd13d64ac7b6c6579e91 144 Pfam PF14376 Haem-binding domain 11 137 2.7E-43 T 11-10-2018 IPR025992 Haem-binding domain YH65_03480 c8ae6ce8bb9b25ee44281c29d16b169b 422 SUPERFAMILY SSF48452 274 399 2.43E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YH65_03480 c8ae6ce8bb9b25ee44281c29d16b169b 422 SUPERFAMILY SSF48452 99 259 4.61E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YH65_03480 c8ae6ce8bb9b25ee44281c29d16b169b 422 Gene3D G3DSA:1.25.40.10 22 266 4.8E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YH65_03480 c8ae6ce8bb9b25ee44281c29d16b169b 422 Gene3D G3DSA:1.25.40.10 273 402 3.7E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YH65_04320 fe52faf026af33ed0b2129b502ab3286 174 Gene3D G3DSA:2.50.20.10 20 172 1.7E-14 T 11-10-2018 YH65_04320 fe52faf026af33ed0b2129b502ab3286 174 SUPERFAMILY SSF89392 23 152 6.67E-18 T 11-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX YH65_04320 fe52faf026af33ed0b2129b502ab3286 174 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 24 88 1.2E-12 T 11-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like YH65_09135 365782f6fb339fbd49500dc40f9866e5 129 Pfam PF01219 Prokaryotic diacylglycerol kinase 24 117 4.2E-19 T 11-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 YH65_09135 365782f6fb339fbd49500dc40f9866e5 129 Gene3D G3DSA:1.10.3830.10 8 124 3.3E-20 T 11-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 YH65_05750 df630e3e26e585543bf2ad8fd87467e0 689 Gene3D G3DSA:3.40.50.300 577 665 1.2E-34 T 11-10-2018 YH65_05750 df630e3e26e585543bf2ad8fd87467e0 689 Gene3D G3DSA:1.10.486.10 371 402 8.4E-28 T 11-10-2018 YH65_05750 df630e3e26e585543bf2ad8fd87467e0 689 Pfam PF00580 UvrD/REP helicase N-terminal domain 6 262 5.2E-49 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 YH65_05750 df630e3e26e585543bf2ad8fd87467e0 689 Gene3D G3DSA:3.40.50.300 6 265 6.1E-58 T 11-10-2018 YH65_05750 df630e3e26e585543bf2ad8fd87467e0 689 Pfam PF13361 UvrD-like helicase C-terminal domain 269 648 1.3E-49 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 YH65_05750 df630e3e26e585543bf2ad8fd87467e0 689 Gene3D G3DSA:3.40.50.300 272 370 8.4E-28 T 11-10-2018 YH65_05750 df630e3e26e585543bf2ad8fd87467e0 689 Gene3D G3DSA:1.10.10.160 110 183 6.1E-58 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily YH65_05750 df630e3e26e585543bf2ad8fd87467e0 689 Gene3D G3DSA:1.10.486.10 480 576 1.2E-34 T 11-10-2018 YH65_05750 df630e3e26e585543bf2ad8fd87467e0 689 SUPERFAMILY SSF52540 3 665 3.37E-112 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_10165 8f421df977262b7ed3b85740fb879f3c 487 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 8 484 3.7E-201 T 11-10-2018 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 YH65_10165 8f421df977262b7ed3b85740fb879f3c 487 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 13 454 4.7E-106 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YH65_10165 8f421df977262b7ed3b85740fb879f3c 487 SUPERFAMILY SSF81442 9 482 6.41E-111 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YH65_10165 8f421df977262b7ed3b85740fb879f3c 487 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 215 270 - T 11-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YH65_10165 8f421df977262b7ed3b85740fb879f3c 487 Gene3D G3DSA:1.20.210.10 1 482 1.8E-174 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YH65_07640 057a53f1449ef6e9d23e70b1f61eddea 420 Gene3D G3DSA:2.40.160.10 43 420 3.8E-50 T 11-10-2018 IPR023614 Porin domain superfamily YH65_07640 057a53f1449ef6e9d23e70b1f61eddea 420 SUPERFAMILY SSF56935 45 420 2.98E-9 T 11-10-2018 YH65_07640 057a53f1449ef6e9d23e70b1f61eddea 420 Pfam PF03573 outer membrane porin, OprD family 126 419 1.8E-31 T 11-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 YH65_11105 d16650e30097b03dda9e8db95288d301 224 Gene3D G3DSA:3.30.2010.10 130 221 6.7E-20 T 11-10-2018 YH65_11105 d16650e30097b03dda9e8db95288d301 224 Pfam PF01863 Protein of unknown function DUF45 17 221 7.2E-51 T 11-10-2018 IPR002725 Protein of unknown function DUF45 YH65_02570 6175cdd39c5e9a4f0868ab4684715d8f 464 Gene3D G3DSA:3.90.700.10 207 306 1.9E-107 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 YH65_02570 6175cdd39c5e9a4f0868ab4684715d8f 464 SUPERFAMILY SSF51905 7 368 9.47E-38 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_02570 6175cdd39c5e9a4f0868ab4684715d8f 464 Pfam PF00890 FAD binding domain 7 352 2.6E-63 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 YH65_02570 6175cdd39c5e9a4f0868ab4684715d8f 464 Gene3D G3DSA:3.50.50.60 6 362 1.9E-107 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_02570 6175cdd39c5e9a4f0868ab4684715d8f 464 Gene3D G3DSA:1.20.58.100 387 463 3.5E-12 T 11-10-2018 YH65_02570 6175cdd39c5e9a4f0868ab4684715d8f 464 SUPERFAMILY SSF56425 197 311 1.23E-32 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 YH65_02570 6175cdd39c5e9a4f0868ab4684715d8f 464 SUPERFAMILY SSF46977 390 460 1.15E-13 T 11-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 YH65_10605 b6e752caac8c7cd2984a3ded294a28a7 82 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 3 71 4.0E-26 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YH65_10605 b6e752caac8c7cd2984a3ded294a28a7 82 Gene3D G3DSA:2.40.50.140 1 82 1.4E-31 T 11-10-2018 YH65_10605 b6e752caac8c7cd2984a3ded294a28a7 82 SUPERFAMILY SSF50249 3 80 1.76E-29 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold YH65_10605 b6e752caac8c7cd2984a3ded294a28a7 82 PRINTS PR00973 Ribosomal protein S17 family signature 22 45 1.3E-11 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YH65_10605 b6e752caac8c7cd2984a3ded294a28a7 82 PRINTS PR00973 Ribosomal protein S17 family signature 64 71 1.3E-11 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YH65_10605 b6e752caac8c7cd2984a3ded294a28a7 82 PRINTS PR00973 Ribosomal protein S17 family signature 54 64 1.3E-11 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YH65_10605 b6e752caac8c7cd2984a3ded294a28a7 82 ProSitePatterns PS00056 Ribosomal protein S17 signature. 54 66 - T 11-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_10605 b6e752caac8c7cd2984a3ded294a28a7 82 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 3 73 1.3E-31 T 11-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YH65_10605 b6e752caac8c7cd2984a3ded294a28a7 82 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 3 78 22.131 T 11-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YH65_10605 b6e752caac8c7cd2984a3ded294a28a7 82 Pfam PF00366 Ribosomal protein S17 8 75 8.3E-30 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YH65_06000 be3ffd19498f268da2ee7d34f1903ee9 206 SUPERFAMILY SSF53098 31 200 1.59E-37 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily YH65_06000 be3ffd19498f268da2ee7d34f1903ee9 206 Gene3D G3DSA:3.30.420.10 25 204 2.0E-37 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 YH65_06000 be3ffd19498f268da2ee7d34f1903ee9 206 Pfam PF00929 Exonuclease 32 194 5.6E-26 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III YH65_06000 be3ffd19498f268da2ee7d34f1903ee9 206 SMART SM00479 30 203 7.8E-29 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III YH65_09735 fa28e1e982e69409bf56181d2558f13c 627 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 313 339 1.2E-9 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_09735 fa28e1e982e69409bf56181d2558f13c 627 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 162 186 1.2E-9 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_09735 fa28e1e982e69409bf56181d2558f13c 627 Pfam PF00361 Proton-conducting membrane transporter 57 344 1.6E-55 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_04840 ebdd98f9e162082d66c640cc6167e85d 283 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 2 203 2.6E-21 T 11-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 YH65_04840 ebdd98f9e162082d66c640cc6167e85d 283 Pfam PF01867 CRISPR associated protein Cas1 4 208 6.9E-22 T 11-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 YH65_04840 ebdd98f9e162082d66c640cc6167e85d 283 TIGRFAM TIGR03639 cas1_NMENI: CRISPR-associated endonuclease Cas1, subtype II/NMENI 2 254 1.4E-66 T 11-10-2018 IPR019855 CRISPR-associated protein Cas1, NMENI subtype GO:0004520|GO:0043571|GO:0046872 YH65_04840 ebdd98f9e162082d66c640cc6167e85d 283 Gene3D G3DSA:1.20.120.920 66 272 1.1E-29 T 11-10-2018 YH65_09595 61e57e64fc767787d6e30e22f16b0e5c 330 Gene3D G3DSA:3.30.70.3460 193 330 4.3E-45 T 11-10-2018 YH65_09595 61e57e64fc767787d6e30e22f16b0e5c 330 Gene3D G3DSA:3.30.70.3460 61 169 2.3E-28 T 11-10-2018 YH65_08115 cd2a9f9b8428c0dfc9ab309c00266930 850 SUPERFAMILY SSF52540 3 250 1.52E-15 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_08115 cd2a9f9b8428c0dfc9ab309c00266930 850 Gene3D G3DSA:3.40.50.300 339 550 1.9E-7 T 11-10-2018 YH65_08115 cd2a9f9b8428c0dfc9ab309c00266930 850 SMART SM00487 52 255 0.0014 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain YH65_08115 cd2a9f9b8428c0dfc9ab309c00266930 850 Pfam PF04851 Type III restriction enzyme, res subunit 6 232 1.4E-14 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 YH65_08115 cd2a9f9b8428c0dfc9ab309c00266930 850 Gene3D G3DSA:3.40.50.300 55 240 8.2E-13 T 11-10-2018 YH65_08990 8d8fc5fc03e1306e0f5ccc5e924352ea 361 Gene3D G3DSA:3.20.20.300 14 360 2.1E-97 T 11-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 YH65_08990 8d8fc5fc03e1306e0f5ccc5e924352ea 361 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 22 356 2.4E-69 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 YH65_08990 8d8fc5fc03e1306e0f5ccc5e924352ea 361 SUPERFAMILY SSF51445 26 361 4.53E-70 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily YH65_03435 20e06c14e51bfc4bfdec68e526616abe 164 TIGRFAM TIGR02087 LEUD_arch: 3-isopropylmalate dehydratase, small subunit 3 157 3.6E-66 T 11-10-2018 IPR011827 Hydrolyase LeuD/HacB/DmdB GO:0016836 KEGG: 00290+4.2.1.33 YH65_03435 20e06c14e51bfc4bfdec68e526616abe 164 Pfam PF00694 Aconitase C-terminal domain 45 99 6.1E-21 T 11-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 YH65_03435 20e06c14e51bfc4bfdec68e526616abe 164 SUPERFAMILY SSF52016 2 159 1.1E-52 T 11-10-2018 YH65_03435 20e06c14e51bfc4bfdec68e526616abe 164 Gene3D G3DSA:3.20.19.10 1 163 9.9E-62 T 11-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 YH65_03435 20e06c14e51bfc4bfdec68e526616abe 164 Hamap MF_01032 Methanogen homoaconitase small subunit [hacB]. 1 160 39.913 T 11-10-2018 IPR011827 Hydrolyase LeuD/HacB/DmdB GO:0016836 KEGG: 00290+4.2.1.33 YH65_09285 81336d9b3f273603f5068c2992a3cf9f 208 SMART SM00100 2 113 2.9E-4 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain YH65_09285 81336d9b3f273603f5068c2992a3cf9f 208 Pfam PF13545 Crp-like helix-turn-helix domain 133 202 1.7E-10 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 YH65_09285 81336d9b3f273603f5068c2992a3cf9f 208 SUPERFAMILY SSF46785 131 205 3.41E-12 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YH65_09285 81336d9b3f273603f5068c2992a3cf9f 208 SUPERFAMILY SSF51206 4 127 4.84E-26 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like YH65_09285 81336d9b3f273603f5068c2992a3cf9f 208 Gene3D G3DSA:2.60.120.1460 2 204 2.9E-40 T 11-10-2018 YH65_09285 81336d9b3f273603f5068c2992a3cf9f 208 Pfam PF00027 Cyclic nucleotide-binding domain 14 101 5.0E-16 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain YH65_05135 59770d2dbae33f68aeb3cfcb24129f60 570 Gene3D G3DSA:3.50.50.60 1 129 4.1E-36 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_05135 59770d2dbae33f68aeb3cfcb24129f60 570 Gene3D G3DSA:3.50.50.60 454 529 1.2E-29 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_05135 59770d2dbae33f68aeb3cfcb24129f60 570 Gene3D G3DSA:3.50.50.60 164 370 4.8E-48 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_05135 59770d2dbae33f68aeb3cfcb24129f60 570 Pfam PF06100 MCRA family 17 512 8.0E-212 T 11-10-2018 IPR010354 Oleate hydratase GO:0006631|GO:0050151|GO:0071949 YH65_05135 59770d2dbae33f68aeb3cfcb24129f60 570 SUPERFAMILY SSF51905 22 286 4.48E-21 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_07660 d1ea651cb958654d019683c16bd7325f 69 Pfam PF09851 Short C-terminal domain 40 65 2.1E-6 T 11-10-2018 IPR018649 SHOCT domain YH65_07710 580e6b7cd1fadf6b3581a5e9d39e6211 123 SUPERFAMILY SSF46785 4 107 8.98E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YH65_07710 580e6b7cd1fadf6b3581a5e9d39e6211 123 Pfam PF12840 Helix-turn-helix domain 10 83 8.5E-9 T 11-10-2018 YH65_07710 580e6b7cd1fadf6b3581a5e9d39e6211 123 SMART SM00418 9 108 0.0058 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 YH65_07710 580e6b7cd1fadf6b3581a5e9d39e6211 123 Gene3D G3DSA:1.10.10.10 2 113 4.2E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YH65_06360 0fd63111b317145443d9605b35679445 423 Pfam PF13372 Alginate export 116 412 1.1E-33 T 11-10-2018 IPR025388 Alginate export domain YH65_09560 a762b775f1caaa73a24007b165383eff 277 Gene3D G3DSA:3.30.70.20 159 236 6.8E-10 T 11-10-2018 YH65_09560 a762b775f1caaa73a24007b165383eff 277 SUPERFAMILY SSF54862 44 236 3.58E-23 T 11-10-2018 YH65_09560 a762b775f1caaa73a24007b165383eff 277 Pfam PF12838 4Fe-4S dicluster domain 163 215 6.6E-7 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YH65_09560 a762b775f1caaa73a24007b165383eff 277 Gene3D G3DSA:3.30.70.20 55 154 1.7E-5 T 11-10-2018 YH65_09560 a762b775f1caaa73a24007b165383eff 277 TIGRFAM TIGR00397 mauM_napG: MauM/NapG family ferredoxin-type protein 7 236 2.2E-57 T 11-10-2018 IPR004494 MauM/NapG ferredoxin-type protein YH65_06220 4e3099912b607b2ded4cc83dee1d5ea1 437 Pfam PF02803 Thiolase, C-terminal domain 298 435 2.1E-40 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 YH65_06220 4e3099912b607b2ded4cc83dee1d5ea1 437 ProSitePatterns PS00099 Thiolases active site. 418 431 - T 11-10-2018 IPR020610 Thiolase, active site GO:0016747 YH65_06220 4e3099912b607b2ded4cc83dee1d5ea1 437 Pfam PF00108 Thiolase, N-terminal domain 13 290 4.3E-72 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 YH65_06220 4e3099912b607b2ded4cc83dee1d5ea1 437 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 15 435 9.0E-132 T 11-10-2018 IPR002155 Thiolase GO:0016747 YH65_06220 4e3099912b607b2ded4cc83dee1d5ea1 437 SUPERFAMILY SSF53901 13 296 1.67E-65 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 YH65_06220 4e3099912b607b2ded4cc83dee1d5ea1 437 ProSitePatterns PS00737 Thiolases signature 2. 383 399 - T 11-10-2018 IPR020613 Thiolase, conserved site GO:0016747 YH65_06220 4e3099912b607b2ded4cc83dee1d5ea1 437 PIRSF PIRSF000429 7 437 2.6E-126 T 11-10-2018 IPR002155 Thiolase GO:0016747 YH65_06220 4e3099912b607b2ded4cc83dee1d5ea1 437 SUPERFAMILY SSF53901 298 436 9.83E-36 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 YH65_06220 4e3099912b607b2ded4cc83dee1d5ea1 437 Gene3D G3DSA:3.40.47.10 15 303 7.0E-129 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 YH65_06220 4e3099912b607b2ded4cc83dee1d5ea1 437 Gene3D G3DSA:3.40.47.10 152 433 7.0E-129 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 YH65_02640 c3bd73f7827099b9103a430dba330cb2 218 Pfam PF02602 Uroporphyrinogen-III synthase HemD 22 207 3.9E-23 T 11-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 YH65_02640 c3bd73f7827099b9103a430dba330cb2 218 Gene3D G3DSA:3.40.50.10090 136 211 3.3E-37 T 11-10-2018 YH65_02640 c3bd73f7827099b9103a430dba330cb2 218 Gene3D G3DSA:3.40.50.10090 34 135 3.3E-37 T 11-10-2018 YH65_02640 c3bd73f7827099b9103a430dba330cb2 218 SUPERFAMILY SSF69618 19 209 1.44E-25 T 11-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 YH65_04305 53bb2ee0255fd3b1fc743b2d7074f990 868 Pfam PF13109 AsmA-like C-terminal region 621 835 4.6E-70 T 11-10-2018 IPR039441 AsmA-like C-terminal region YH65_04305 53bb2ee0255fd3b1fc743b2d7074f990 868 Pfam PF13116 Protein of unknown function 189 456 8.4E-40 T 11-10-2018 IPR025263 Domain of unknown function DUF3971 YH65_06805 ed7af4be473e1ec8847f7b9e1eeee3e3 261 SUPERFAMILY SSF55681 1 255 1.24E-56 T 11-10-2018 YH65_06805 ed7af4be473e1ec8847f7b9e1eeee3e3 261 Gene3D G3DSA:3.30.930.10 3 259 1.5E-58 T 11-10-2018 YH65_06805 ed7af4be473e1ec8847f7b9e1eeee3e3 261 Pfam PF03099 Biotin/lipoate A/B protein ligase family 53 179 7.6E-7 T 11-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 YH65_10950 1ebe920a05932e0dd18e02c30c0b3646 264 Pfam PF00092 von Willebrand factor type A domain 38 214 7.2E-26 T 11-10-2018 IPR002035 von Willebrand factor, type A YH65_10950 1ebe920a05932e0dd18e02c30c0b3646 264 Gene3D G3DSA:3.40.50.410 36 221 2.6E-47 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily YH65_10950 1ebe920a05932e0dd18e02c30c0b3646 264 SUPERFAMILY SSF53300 34 218 2.97E-35 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily YH65_10950 1ebe920a05932e0dd18e02c30c0b3646 264 SMART SM00327 36 220 2.4E-22 T 11-10-2018 IPR002035 von Willebrand factor, type A YH65_04115 0b6c207229bff191ecdf38ad84ca3a28 677 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 54 501 1.0E-14 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 YH65_04115 0b6c207229bff191ecdf38ad84ca3a28 677 SMART SM00382 51 516 9.5E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain YH65_04115 0b6c207229bff191ecdf38ad84ca3a28 677 Gene3D G3DSA:3.40.50.300 26 217 2.4E-6 T 11-10-2018 YH65_04115 0b6c207229bff191ecdf38ad84ca3a28 677 Gene3D G3DSA:3.40.50.300 233 525 1.5E-8 T 11-10-2018 YH65_04115 0b6c207229bff191ecdf38ad84ca3a28 677 SUPERFAMILY SSF52540 53 518 7.62E-20 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_08770 11ceaacb66fcd2fd213eac5dbb272062 367 Pfam PF07687 Peptidase dimerisation domain 167 268 3.4E-15 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain YH65_08770 11ceaacb66fcd2fd213eac5dbb272062 367 SUPERFAMILY SSF55031 171 274 1.12E-21 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain YH65_08770 11ceaacb66fcd2fd213eac5dbb272062 367 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 1 366 44.333 T 11-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 YH65_08770 11ceaacb66fcd2fd213eac5dbb272062 367 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 4 363 9.8E-136 T 11-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 YH65_08770 11ceaacb66fcd2fd213eac5dbb272062 367 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 93 127 - T 11-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 YH65_08770 11ceaacb66fcd2fd213eac5dbb272062 367 Gene3D G3DSA:3.30.70.360 171 282 2.2E-101 T 11-10-2018 YH65_08770 11ceaacb66fcd2fd213eac5dbb272062 367 Pfam PF01546 Peptidase family M20/M25/M40 60 362 8.9E-40 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 YH65_08770 11ceaacb66fcd2fd213eac5dbb272062 367 Gene3D G3DSA:3.40.630.10 6 353 2.2E-101 T 11-10-2018 YH65_08770 11ceaacb66fcd2fd213eac5dbb272062 367 SUPERFAMILY SSF53187 3 365 2.04E-61 T 11-10-2018 YH65_05695 dbddd8445a90d914992daa96ac7bc2d3 260 Gene3D G3DSA:3.40.1090.10 1 105 7.7E-19 T 11-10-2018 YH65_05695 dbddd8445a90d914992daa96ac7bc2d3 260 Gene3D G3DSA:3.40.1090.10 106 230 1.1E-14 T 11-10-2018 YH65_05695 dbddd8445a90d914992daa96ac7bc2d3 260 Pfam PF01734 Patatin-like phospholipase 12 173 8.2E-24 T 11-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 YH65_05695 dbddd8445a90d914992daa96ac7bc2d3 260 SUPERFAMILY SSF52151 10 216 5.49E-38 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase YH65_09355 fc43f168c8d962087d9842ba1ea5e174 403 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 48 209 1.9E-40 T 11-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 YH65_09355 fc43f168c8d962087d9842ba1ea5e174 403 Gene3D G3DSA:3.40.50.2000 211 378 7.9E-44 T 11-10-2018 YH65_09355 fc43f168c8d962087d9842ba1ea5e174 403 SUPERFAMILY SSF53756 117 343 1.0E-8 T 11-10-2018 YH65_09355 fc43f168c8d962087d9842ba1ea5e174 403 Gene3D G3DSA:3.40.50.11720 43 209 2.5E-27 T 11-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 YH65_03425 f4fc2ec82723eb16cc9909e2c569b264 267 SUPERFAMILY SSF55729 12 238 4.63E-16 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase YH65_03425 f4fc2ec82723eb16cc9909e2c569b264 267 Gene3D G3DSA:3.40.630.30 41 201 2.6E-20 T 11-10-2018 YH65_08775 f5dd321cf4d30e7e6e9f02a4b7cdb842 114 SMART SM00450 15 114 4.7E-11 T 11-10-2018 IPR001763 Rhodanese-like domain YH65_08775 f5dd321cf4d30e7e6e9f02a4b7cdb842 114 Gene3D G3DSA:3.40.250.10 3 114 2.1E-19 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily YH65_08775 f5dd321cf4d30e7e6e9f02a4b7cdb842 114 Pfam PF00581 Rhodanese-like domain 16 109 1.8E-12 T 11-10-2018 IPR001763 Rhodanese-like domain YH65_08775 f5dd321cf4d30e7e6e9f02a4b7cdb842 114 SUPERFAMILY SSF52821 8 110 2.75E-18 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily YH65_05425 96c6d2dbe262d50471b5d83e086bed78 296 Pfam PF06189 5'-nucleotidase 38 295 2.3E-103 T 11-10-2018 IPR010394 5-nucleotidase GO:0000166|GO:0000287|GO:0005737|GO:0008253|GO:0009117 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821|Reactome: R-HSA-74259 YH65_06210 222ba70a052dc8f23f1967fa3d57ab00 399 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 276 298 1.8E-6 T 11-10-2018 YH65_06210 222ba70a052dc8f23f1967fa3d57ab00 399 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 97 115 1.8E-6 T 11-10-2018 YH65_06210 222ba70a052dc8f23f1967fa3d57ab00 399 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 156 174 1.8E-6 T 11-10-2018 YH65_06210 222ba70a052dc8f23f1967fa3d57ab00 399 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 1.8E-6 T 11-10-2018 YH65_06210 222ba70a052dc8f23f1967fa3d57ab00 399 SUPERFAMILY SSF51905 1 333 2.29E-29 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_06210 222ba70a052dc8f23f1967fa3d57ab00 399 Gene3D G3DSA:3.50.50.100 1 391 2.4E-86 T 11-10-2018 YH65_06210 222ba70a052dc8f23f1967fa3d57ab00 399 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 319 5.3E-36 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YH65_07030 90c423b451bedb79615417345d587e46 109 SUPERFAMILY SSF143011 1 90 2.88E-5 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily YH65_07030 90c423b451bedb79615417345d587e46 109 PIRSF PIRSF039032 1 109 1.4E-19 T 11-10-2018 IPR009387 Toxin HigB-2 YH65_06335 f5720d22ce5895f24fa55a7133534195 104 Gene3D G3DSA:3.40.30.10 29 96 8.3E-6 T 11-10-2018 YH65_09125 e6ea2eef0bec0179040f09e17811aece 738 Hamap MF_00092 Endonuclease MutS2 [mutS2]. 6 738 18.032 T 11-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 YH65_09125 e6ea2eef0bec0179040f09e17811aece 738 Pfam PF01713 Smr domain 669 738 3.5E-12 T 11-10-2018 IPR002625 Smr domain YH65_09125 e6ea2eef0bec0179040f09e17811aece 738 SUPERFAMILY SSF160443 669 737 1.31E-7 T 11-10-2018 IPR036063 Smr domain superfamily YH65_09125 e6ea2eef0bec0179040f09e17811aece 738 Gene3D G3DSA:3.40.50.300 274 576 4.1E-44 T 11-10-2018 YH65_09125 e6ea2eef0bec0179040f09e17811aece 738 SMART SM00534 305 489 3.4E-27 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 YH65_09125 e6ea2eef0bec0179040f09e17811aece 738 SUPERFAMILY SSF52540 280 492 4.97E-26 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_09125 e6ea2eef0bec0179040f09e17811aece 738 Pfam PF00488 MutS domain V 308 488 4.7E-15 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 YH65_09125 e6ea2eef0bec0179040f09e17811aece 738 SMART SM00463 664 738 0.0012 T 11-10-2018 IPR002625 Smr domain YH65_09125 e6ea2eef0bec0179040f09e17811aece 738 SMART SM00533 4 296 4.4E-4 T 11-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 YH65_09125 e6ea2eef0bec0179040f09e17811aece 738 PIRSF PIRSF005814 9 738 6.5E-99 T 11-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 YH65_09125 e6ea2eef0bec0179040f09e17811aece 738 Gene3D G3DSA:3.30.1370.110 655 738 1.5E-15 T 11-10-2018 YH65_06205 f67aba36bff21babb1f24a6cb0622b41 268 Gene3D G3DSA:3.40.50.1820 50 203 6.7E-12 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold YH65_06205 f67aba36bff21babb1f24a6cb0622b41 268 Pfam PF11187 Protein of unknown function (DUF2974) 79 169 7.1E-7 T 11-10-2018 IPR024499 Protein of unknown function DUF2974 YH65_06205 f67aba36bff21babb1f24a6cb0622b41 268 SUPERFAMILY SSF53474 61 193 1.93E-19 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold YH65_00010 523bb41a688c4ec8fdeabef780701735 355 PIRSF PIRSF000804 1 355 2.5E-73 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 YH65_00010 523bb41a688c4ec8fdeabef780701735 355 Pfam PF02767 DNA polymerase III beta subunit, central domain 129 238 1.7E-18 T 11-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 YH65_00010 523bb41a688c4ec8fdeabef780701735 355 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 241 352 1.5E-11 T 11-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 YH65_00010 523bb41a688c4ec8fdeabef780701735 355 SMART SM00480 17 351 1.3E-63 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 YH65_00010 523bb41a688c4ec8fdeabef780701735 355 Gene3D G3DSA:3.10.150.10 1 118 6.5E-23 T 11-10-2018 YH65_00010 523bb41a688c4ec8fdeabef780701735 355 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 119 2.9E-15 T 11-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 YH65_00010 523bb41a688c4ec8fdeabef780701735 355 SUPERFAMILY SSF55979 240 353 8.98E-20 T 11-10-2018 YH65_00010 523bb41a688c4ec8fdeabef780701735 355 SUPERFAMILY SSF55979 126 239 8.64E-22 T 11-10-2018 YH65_00010 523bb41a688c4ec8fdeabef780701735 355 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 353 5.4E-74 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 YH65_00010 523bb41a688c4ec8fdeabef780701735 355 Gene3D G3DSA:3.10.150.10 242 355 9.3E-38 T 11-10-2018 YH65_00010 523bb41a688c4ec8fdeabef780701735 355 SUPERFAMILY SSF55979 1 119 1.39E-18 T 11-10-2018 YH65_00010 523bb41a688c4ec8fdeabef780701735 355 Gene3D G3DSA:3.10.150.10 120 241 3.2E-28 T 11-10-2018 YH65_07325 077a4e93c3f4ec0d84903c4d02c30bce 164 SUPERFAMILY SSF52540 5 164 2.07E-31 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_07325 077a4e93c3f4ec0d84903c4d02c30bce 164 Gene3D G3DSA:3.40.50.300 3 164 4.5E-35 T 11-10-2018 YH65_07325 077a4e93c3f4ec0d84903c4d02c30bce 164 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 5 162 4.5E-36 T 11-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 YH65_07325 077a4e93c3f4ec0d84903c4d02c30bce 164 PIRSF PIRSF006135 1 164 2.9E-36 T 11-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 YH65_05400 e738157acf7e317105076202ab73d92c 404 SUPERFAMILY SSF56112 2 400 9.42E-80 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily YH65_05400 e738157acf7e317105076202ab73d92c 404 Gene3D G3DSA:3.30.200.20 1 116 1.7E-35 T 11-10-2018 YH65_05400 e738157acf7e317105076202ab73d92c 404 Gene3D G3DSA:3.90.1200.10 117 404 2.6E-105 T 11-10-2018 YH65_05400 e738157acf7e317105076202ab73d92c 404 TIGRFAM TIGR01767 MTRK: S-methyl-5-thioribose kinase 34 403 4.3E-112 T 11-10-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|MetaCyc: PWY-6754 YH65_05400 e738157acf7e317105076202ab73d92c 404 Pfam PF01636 Phosphotransferase enzyme family 33 276 1.1E-16 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase YH65_05400 e738157acf7e317105076202ab73d92c 404 Hamap MF_01683 Methylthioribose kinase [mtnK]. 1 404 155.115 T 11-10-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|MetaCyc: PWY-6754 YH65_05400 e738157acf7e317105076202ab73d92c 404 PIRSF PIRSF031134 1 404 3.5E-139 T 11-10-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|MetaCyc: PWY-6754 YH65_06675 daec6f38b5d72db73cea857b180194f4 231 SMART SM00448 4 117 7.6E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YH65_06675 daec6f38b5d72db73cea857b180194f4 231 Gene3D G3DSA:1.10.10.10 142 231 5.6E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YH65_06675 daec6f38b5d72db73cea857b180194f4 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 227 1.9E-16 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YH65_06675 daec6f38b5d72db73cea857b180194f4 231 SUPERFAMILY SSF52172 1 125 2.7E-32 T 11-10-2018 IPR011006 CheY-like superfamily YH65_06675 daec6f38b5d72db73cea857b180194f4 231 Pfam PF00072 Response regulator receiver domain 6 114 1.5E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YH65_06675 daec6f38b5d72db73cea857b180194f4 231 SMART SM00862 157 227 3.9E-14 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YH65_06675 daec6f38b5d72db73cea857b180194f4 231 SUPERFAMILY SSF46894 136 229 1.11E-16 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YH65_06675 daec6f38b5d72db73cea857b180194f4 231 Gene3D G3DSA:3.40.50.2300 1 132 6.6E-31 T 11-10-2018 YH65_01735 4a85e7e402640fd5b3299bca0d907d0e 414 Gene3D G3DSA:1.10.287.130 160 263 1.0E-19 T 11-10-2018 YH65_01735 4a85e7e402640fd5b3299bca0d907d0e 414 SMART SM00387 310 411 0.0086 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YH65_01735 4a85e7e402640fd5b3299bca0d907d0e 414 Pfam PF00672 HAMP domain 164 207 4.0E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 YH65_01735 4a85e7e402640fd5b3299bca0d907d0e 414 SMART SM00304 159 211 0.0055 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 YH65_01735 4a85e7e402640fd5b3299bca0d907d0e 414 Gene3D G3DSA:3.30.565.10 264 406 5.1E-8 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YH65_01735 4a85e7e402640fd5b3299bca0d907d0e 414 SMART SM00388 212 270 8.2E-7 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YH65_01735 4a85e7e402640fd5b3299bca0d907d0e 414 SUPERFAMILY SSF55874 271 401 3.8E-12 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YH65_01735 4a85e7e402640fd5b3299bca0d907d0e 414 SUPERFAMILY SSF47384 197 268 8.44E-9 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 YH65_01735 4a85e7e402640fd5b3299bca0d907d0e 414 SUPERFAMILY SSF158472 163 208 3.79E-7 T 11-10-2018 YH65_05255 96b5b137d29f04643a10d678a1286ae1 252 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YH65_05255 96b5b137d29f04643a10d678a1286ae1 252 Pfam PF00005 ABC transporter 19 173 2.5E-23 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YH65_05255 96b5b137d29f04643a10d678a1286ae1 252 SMART SM00382 28 225 1.5E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain YH65_05255 96b5b137d29f04643a10d678a1286ae1 252 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 4 245 6.2E-108 T 11-10-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524 YH65_05255 96b5b137d29f04643a10d678a1286ae1 252 SUPERFAMILY SSF52540 4 232 2.61E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_05255 96b5b137d29f04643a10d678a1286ae1 252 Gene3D G3DSA:3.40.50.300 3 250 3.2E-62 T 11-10-2018 YH65_06975 332b6b9aa2e18afbb7a3bf00c339c6eb 90 Gene3D G3DSA:3.40.1620.10 4 43 3.2E-5 T 11-10-2018 YH65_06975 332b6b9aa2e18afbb7a3bf00c339c6eb 90 SUPERFAMILY SSF143120 6 79 6.8E-16 T 11-10-2018 IPR036165 YefM-like superfamily YH65_06975 332b6b9aa2e18afbb7a3bf00c339c6eb 90 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 6 75 7.1E-14 T 11-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM YH65_06975 332b6b9aa2e18afbb7a3bf00c339c6eb 90 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 10 59 1.3E-12 T 11-10-2018 YH65_00225 9f64864603cfc06d787e1c411e350a26 92 Gene3D G3DSA:3.30.300.130 2 87 3.1E-24 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily YH65_00225 9f64864603cfc06d787e1c411e350a26 92 Pfam PF01106 NifU-like domain 13 77 7.4E-24 T 11-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 YH65_00225 9f64864603cfc06d787e1c411e350a26 92 SUPERFAMILY SSF117916 3 86 2.29E-25 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily YH65_00225 9f64864603cfc06d787e1c411e350a26 92 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 18 80 5.0E-20 T 11-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 YH65_04510 dff5e25c209af3da2353c31c25e06f37 228 SMART SM00450 103 223 3.3E-5 T 11-10-2018 IPR001763 Rhodanese-like domain YH65_04510 dff5e25c209af3da2353c31c25e06f37 228 Pfam PF00581 Rhodanese-like domain 108 218 1.6E-14 T 11-10-2018 IPR001763 Rhodanese-like domain YH65_04510 dff5e25c209af3da2353c31c25e06f37 228 Gene3D G3DSA:3.40.250.10 88 226 8.4E-16 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily YH65_04510 dff5e25c209af3da2353c31c25e06f37 228 SUPERFAMILY SSF52821 99 221 1.06E-15 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily YH65_04410 223a7629ecbe1b24f914b355f49a41c3 91 Gene3D G3DSA:3.30.70.1120 1 91 1.4E-7 T 11-10-2018 IPR036746 TT1725-like superfamily YH65_04410 223a7629ecbe1b24f914b355f49a41c3 91 SUPERFAMILY SSF103007 1 89 1.19E-11 T 11-10-2018 IPR036746 TT1725-like superfamily YH65_04410 223a7629ecbe1b24f914b355f49a41c3 91 Pfam PF04456 Protein of unknown function (DUF503) 4 80 5.6E-15 T 11-10-2018 IPR007546 Protein of unknown function DUF503 YH65_08715 76d6ae6615dc193ca73104f91bce43ee 253 SUPERFAMILY SSF46626 23 127 2.42E-6 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_08715 76d6ae6615dc193ca73104f91bce43ee 253 TIGRFAM TIGR04484 thiosulf_SoxA: sulfur oxidation c-type cytochrome SoxA 39 253 1.8E-61 T 11-10-2018 IPR025710 SoxAX cytochrome complex subunit A GO:0009055|GO:0016491|GO:0019417|GO:0020037|GO:0070069 YH65_08715 76d6ae6615dc193ca73104f91bce43ee 253 Gene3D G3DSA:1.10.760.10 132 253 1.1E-29 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_08715 76d6ae6615dc193ca73104f91bce43ee 253 Gene3D G3DSA:1.10.760.10 53 131 8.3E-7 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_08715 76d6ae6615dc193ca73104f91bce43ee 253 SUPERFAMILY SSF46626 138 241 1.41E-23 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_08715 76d6ae6615dc193ca73104f91bce43ee 253 PIRSF PIRSF038455 7 253 2.3E-58 T 11-10-2018 IPR025710 SoxAX cytochrome complex subunit A GO:0009055|GO:0016491|GO:0019417|GO:0020037|GO:0070069 YH65_03485 f059e394dfb6f7be09e342c26b04e9d7 264 Pfam PF00218 Indole-3-glycerol phosphate synthase 5 259 1.9E-88 T 11-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 YH65_03485 f059e394dfb6f7be09e342c26b04e9d7 264 Gene3D G3DSA:3.20.20.70 1 264 7.5E-99 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YH65_03485 f059e394dfb6f7be09e342c26b04e9d7 264 Hamap MF_00134_A Indole-3-glycerol phosphate synthase [trpC]. 39 258 30.334 T 11-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 YH65_03485 f059e394dfb6f7be09e342c26b04e9d7 264 SUPERFAMILY SSF51366 13 261 1.29E-84 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 YH65_03485 f059e394dfb6f7be09e342c26b04e9d7 264 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 56 74 - T 11-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 YH65_03485 f059e394dfb6f7be09e342c26b04e9d7 264 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 3 262 34.467 T 11-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 YH65_09085 ad8569e8068d1d51ea0851ba8d83f654 87 Pfam PF01084 Ribosomal protein S18 19 69 1.2E-20 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_09085 ad8569e8068d1d51ea0851ba8d83f654 87 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 4 74 18.383 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_09085 ad8569e8068d1d51ea0851ba8d83f654 87 TIGRFAM TIGR00165 S18: ribosomal protein bS18 6 73 1.4E-31 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_09085 ad8569e8068d1d51ea0851ba8d83f654 87 PRINTS PR00974 Ribosomal protein S18 family signature 29 39 1.7E-12 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_09085 ad8569e8068d1d51ea0851ba8d83f654 87 PRINTS PR00974 Ribosomal protein S18 family signature 61 71 1.7E-12 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_09085 ad8569e8068d1d51ea0851ba8d83f654 87 PRINTS PR00974 Ribosomal protein S18 family signature 39 46 1.7E-12 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_09085 ad8569e8068d1d51ea0851ba8d83f654 87 PRINTS PR00974 Ribosomal protein S18 family signature 47 61 1.7E-12 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_09085 ad8569e8068d1d51ea0851ba8d83f654 87 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 74 1.0E-18 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_09085 ad8569e8068d1d51ea0851ba8d83f654 87 Gene3D G3DSA:4.10.640.10 1 76 6.5E-23 T 11-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_09085 ad8569e8068d1d51ea0851ba8d83f654 87 SUPERFAMILY SSF46911 4 74 1.57E-23 T 11-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_05685 52089c6e14ffba95744e329517cfd40d 379 SMART SM01204 218 357 3.5E-41 T 11-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 YH65_05685 52089c6e14ffba95744e329517cfd40d 379 Pfam PF08495 FIST N domain 27 216 7.0E-29 T 11-10-2018 IPR013702 FIST domain, N-terminal YH65_05685 52089c6e14ffba95744e329517cfd40d 379 SMART SM00897 24 217 1.1E-38 T 11-10-2018 IPR013702 FIST domain, N-terminal YH65_05685 52089c6e14ffba95744e329517cfd40d 379 Pfam PF10442 FIST C domain 218 356 1.5E-32 T 11-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 YH65_05360 b608593adb551071fa9ee70fb0be372b 223 Gene3D G3DSA:3.40.50.880 1 223 3.2E-67 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like YH65_05360 b608593adb551071fa9ee70fb0be372b 223 SMART SM01211 1 221 6.0E-116 T 11-10-2018 YH65_05360 b608593adb551071fa9ee70fb0be372b 223 TIGRFAM TIGR01737 FGAM_synth_I: phosphoribosylformylglycinamidine synthase I 1 221 4.5E-94 T 11-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 YH65_05360 b608593adb551071fa9ee70fb0be372b 223 SUPERFAMILY SSF52317 1 221 7.73E-71 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like YH65_05360 b608593adb551071fa9ee70fb0be372b 223 Hamap MF_00421 Phosphoribosylformylglycinamidine synthase subunit PurQ [purQ]. 1 223 41.596 T 11-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 YH65_05360 b608593adb551071fa9ee70fb0be372b 223 PIRSF PIRSF001586 1 222 1.3E-82 T 11-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 YH65_05360 b608593adb551071fa9ee70fb0be372b 223 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 2 208 3.2E-43 T 11-10-2018 YH65_05490 a19612945a20c99a93b61dff6ce1ed92 938 Gene3D G3DSA:3.40.50.300 577 722 3.4E-125 T 11-10-2018 YH65_05490 a19612945a20c99a93b61dff6ce1ed92 938 Pfam PF12513 Mitochondrial degradasome RNA helicase subunit C terminal 842 888 2.0E-13 T 11-10-2018 IPR022192 Mitochondrial degradasome RNA helicase subunit, C-terminal domain GO:0016817 YH65_05490 a19612945a20c99a93b61dff6ce1ed92 938 SMART SM00487 401 581 2.2E-5 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain YH65_05490 a19612945a20c99a93b61dff6ce1ed92 938 SMART SM00490 608 696 1.3E-15 T 11-10-2018 IPR001650 Helicase, C-terminal YH65_05490 a19612945a20c99a93b61dff6ce1ed92 938 Gene3D G3DSA:1.20.272.40 419 795 3.4E-125 T 11-10-2018 YH65_05490 a19612945a20c99a93b61dff6ce1ed92 938 Gene3D G3DSA:1.20.58.1080 798 905 3.0E-11 T 11-10-2018 YH65_05490 a19612945a20c99a93b61dff6ce1ed92 938 Gene3D G3DSA:3.40.50.300 422 576 3.4E-125 T 11-10-2018 YH65_05490 a19612945a20c99a93b61dff6ce1ed92 938 SUPERFAMILY SSF52540 434 705 1.16E-28 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_05490 a19612945a20c99a93b61dff6ce1ed92 938 Pfam PF00271 Helicase conserved C-terminal domain 590 696 1.2E-11 T 11-10-2018 IPR001650 Helicase, C-terminal YH65_10065 8e6431f4e15180fdabb20402fb5641a3 124 Gene3D G3DSA:3.30.70.20 8 114 3.2E-14 T 11-10-2018 YH65_10065 8e6431f4e15180fdabb20402fb5641a3 124 Pfam PF14697 4Fe-4S dicluster domain 48 94 5.4E-10 T 11-10-2018 YH65_10065 8e6431f4e15180fdabb20402fb5641a3 124 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 82 93 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YH65_10065 8e6431f4e15180fdabb20402fb5641a3 124 SUPERFAMILY SSF54862 40 95 5.58E-17 T 11-10-2018 YH65_10065 8e6431f4e15180fdabb20402fb5641a3 124 TIGRFAM TIGR02179 PorD_KorD: 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate family 31 104 2.8E-27 T 11-10-2018 IPR011898 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate GO:0016625|GO:0051539 YH65_03155 f838a95001007cf6560961594a4e1303 101 SUPERFAMILY SSF141091 1 100 1.24E-32 T 11-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_03155 f838a95001007cf6560961594a4e1303 101 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 101 20.687 T 11-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_03155 f838a95001007cf6560961594a4e1303 101 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 100 6.7E-35 T 11-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_03155 f838a95001007cf6560961594a4e1303 101 ProSitePatterns PS01169 Ribosomal protein L21 signature. 71 93 - T 11-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 YH65_03155 f838a95001007cf6560961594a4e1303 101 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 100 1.8E-33 T 11-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_07545 3a8d934b402e6a2727cb728fc0f16bb8 150 Pfam PF00877 NlpC/P60 family 30 138 5.8E-30 T 11-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain YH65_07545 3a8d934b402e6a2727cb728fc0f16bb8 150 SUPERFAMILY SSF54001 14 141 1.94E-42 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily YH65_07545 3a8d934b402e6a2727cb728fc0f16bb8 150 Gene3D G3DSA:3.90.1720.10 8 141 5.2E-44 T 11-10-2018 YH65_00905 4d20540f829b2d8750a6a67f2108453e 260 PRINTS PR00164 ABC-2 type transport system membrane protein signature 64 86 4.6E-12 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 YH65_00905 4d20540f829b2d8750a6a67f2108453e 260 PRINTS PR00164 ABC-2 type transport system membrane protein signature 179 198 4.6E-12 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 YH65_00905 4d20540f829b2d8750a6a67f2108453e 260 PRINTS PR00164 ABC-2 type transport system membrane protein signature 33 54 4.6E-12 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 YH65_00905 4d20540f829b2d8750a6a67f2108453e 260 PRINTS PR00164 ABC-2 type transport system membrane protein signature 142 166 4.6E-12 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 YH65_00905 4d20540f829b2d8750a6a67f2108453e 260 PRINTS PR00164 ABC-2 type transport system membrane protein signature 199 218 4.6E-12 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 YH65_00905 4d20540f829b2d8750a6a67f2108453e 260 Pfam PF01061 ABC-2 type transporter 15 220 1.4E-13 T 11-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 YH65_08105 543251a8b3eb50ab9996631a32a845eb 404 Pfam PF02321 Outer membrane efflux protein 228 397 2.7E-10 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 YH65_08105 543251a8b3eb50ab9996631a32a845eb 404 Pfam PF02321 Outer membrane efflux protein 49 200 8.6E-9 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 YH65_08105 543251a8b3eb50ab9996631a32a845eb 404 SUPERFAMILY SSF56954 62 397 4.19E-24 T 11-10-2018 YH65_08105 543251a8b3eb50ab9996631a32a845eb 404 Gene3D G3DSA:1.20.1600.10 39 403 5.1E-21 T 11-10-2018 YH65_00450 875b7719bba22ea96dbcb3cd896e9e03 261 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 112 174 3.0E-20 T 11-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_00450 875b7719bba22ea96dbcb3cd896e9e03 261 SUPERFAMILY SSF143243 40 204 1.96E-44 T 11-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_00450 875b7719bba22ea96dbcb3cd896e9e03 261 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 59 177 4.1E-38 T 11-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_00450 875b7719bba22ea96dbcb3cd896e9e03 261 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 139 160 - T 11-10-2018 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_00450 875b7719bba22ea96dbcb3cd896e9e03 261 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 61 179 2.8E-34 T 11-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_00450 875b7719bba22ea96dbcb3cd896e9e03 261 Gene3D G3DSA:3.30.460.80 20 158 7.5E-29 T 11-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_09330 e740caecd9ab5719cc0696b72d1510d6 76 Gene3D G3DSA:3.30.1320.10 1 76 1.6E-31 T 11-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_09330 e740caecd9ab5719cc0696b72d1510d6 76 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 76 23.117 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_09330 e740caecd9ab5719cc0696b72d1510d6 76 Pfam PF00886 Ribosomal protein S16 8 66 5.1E-27 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_09330 e740caecd9ab5719cc0696b72d1510d6 76 TIGRFAM TIGR00002 S16: ribosomal protein bS16 4 73 1.1E-29 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_09330 e740caecd9ab5719cc0696b72d1510d6 76 SUPERFAMILY SSF54565 1 74 2.49E-29 T 11-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_04230 8d47badce3044a1d159b2bf01c85c71f 384 Gene3D G3DSA:3.30.1330.60 234 375 2.9E-20 T 11-10-2018 IPR036737 OmpA-like domain superfamily YH65_04230 8d47badce3044a1d159b2bf01c85c71f 384 Pfam PF00691 OmpA family 252 336 3.5E-13 T 11-10-2018 IPR006665 OmpA-like domain YH65_04230 8d47badce3044a1d159b2bf01c85c71f 384 SUPERFAMILY SSF103088 244 366 1.16E-18 T 11-10-2018 IPR036737 OmpA-like domain superfamily YH65_09255 d01f14c3065600718f404de345cecf3b 688 Gene3D G3DSA:1.10.10.160 110 186 4.6E-92 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily YH65_09255 d01f14c3065600718f404de345cecf3b 688 Gene3D G3DSA:1.10.486.10 379 542 1.7E-99 T 11-10-2018 YH65_09255 d01f14c3065600718f404de345cecf3b 688 Pfam PF00580 UvrD/REP helicase N-terminal domain 8 268 9.1E-73 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 YH65_09255 d01f14c3065600718f404de345cecf3b 688 Pfam PF13361 UvrD-like helicase C-terminal domain 274 604 4.2E-66 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 YH65_09255 d01f14c3065600718f404de345cecf3b 688 Gene3D G3DSA:3.40.50.300 277 622 1.7E-99 T 11-10-2018 YH65_09255 d01f14c3065600718f404de345cecf3b 688 Gene3D G3DSA:3.40.50.300 8 269 4.6E-92 T 11-10-2018 YH65_09255 d01f14c3065600718f404de345cecf3b 688 SUPERFAMILY SSF52540 1 625 1.12E-151 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_02360 abaf1a01767b8447c833696c503831a3 268 Pfam PF01061 ABC-2 type transporter 21 225 3.8E-20 T 11-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 YH65_01495 eb5318735c49c8d3b47c1aa72ba42e71 282 Pfam PF00535 Glycosyl transferase family 2 24 110 1.2E-10 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 YH65_01495 eb5318735c49c8d3b47c1aa72ba42e71 282 Gene3D G3DSA:3.90.550.10 15 199 1.4E-14 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YH65_01495 eb5318735c49c8d3b47c1aa72ba42e71 282 SUPERFAMILY SSF53448 17 266 1.13E-24 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YH65_10555 e4532d8bb88fe6a43591345cd9eb5f3b 103 PRINTS PR00971 Ribosomal protein S10 family signature 3 16 3.1E-19 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_10555 e4532d8bb88fe6a43591345cd9eb5f3b 103 PRINTS PR00971 Ribosomal protein S10 family signature 38 53 3.1E-19 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_10555 e4532d8bb88fe6a43591345cd9eb5f3b 103 PRINTS PR00971 Ribosomal protein S10 family signature 59 73 3.1E-19 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_10555 e4532d8bb88fe6a43591345cd9eb5f3b 103 SUPERFAMILY SSF54999 3 98 3.4E-36 T 11-10-2018 IPR036838 Ribosomal protein S10 domain superfamily YH65_10555 e4532d8bb88fe6a43591345cd9eb5f3b 103 Pfam PF00338 Ribosomal protein S10p/S20e 5 98 2.0E-34 T 11-10-2018 IPR027486 Ribosomal protein S10 domain YH65_10555 e4532d8bb88fe6a43591345cd9eb5f3b 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 27 42 - T 11-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_10555 e4532d8bb88fe6a43591345cd9eb5f3b 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 1 100 25.918 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_10555 e4532d8bb88fe6a43591345cd9eb5f3b 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 2 99 4.3E-42 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_10555 e4532d8bb88fe6a43591345cd9eb5f3b 103 SMART SM01403 5 99 2.4E-49 T 11-10-2018 IPR027486 Ribosomal protein S10 domain YH65_10555 e4532d8bb88fe6a43591345cd9eb5f3b 103 Gene3D G3DSA:3.30.70.600 1 100 1.0E-35 T 11-10-2018 IPR036838 Ribosomal protein S10 domain superfamily YH65_05505 d3058b800137c505e894749ab5ed56ce 185 Pfam PF03729 Short repeat of unknown function (DUF308) 77 143 0.0033 T 11-10-2018 IPR005325 Protein of unknown function DUF308, membrane YH65_05505 d3058b800137c505e894749ab5ed56ce 185 Pfam PF03729 Short repeat of unknown function (DUF308) 141 178 0.014 T 11-10-2018 IPR005325 Protein of unknown function DUF308, membrane YH65_05505 d3058b800137c505e894749ab5ed56ce 185 Pfam PF03729 Short repeat of unknown function (DUF308) 21 88 4.1E-6 T 11-10-2018 IPR005325 Protein of unknown function DUF308, membrane YH65_01550 51627e8f8235a2642867a616f3b7de95 159 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 29 1.1E-6 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site YH65_01550 51627e8f8235a2642867a616f3b7de95 159 SUPERFAMILY SSF54523 9 133 1.49E-15 T 11-10-2018 YH65_01550 51627e8f8235a2642867a616f3b7de95 159 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 28 8.0E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site YH65_01550 51627e8f8235a2642867a616f3b7de95 159 Gene3D G3DSA:3.30.700.10 9 149 1.2E-16 T 11-10-2018 YH65_10155 75336fe2a2d2607cbfb31a4c482c4248 71 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 1 51 6.3E-19 T 11-10-2018 IPR008621 Cbb3-type cytochrome oxidase component YH65_10155 75336fe2a2d2607cbfb31a4c482c4248 71 TIGRFAM TIGR02736 cbb3_Q_epsi: cytochrome c oxidase, cbb3-type, CcoQ subunit 8 59 2.4E-21 T 11-10-2018 IPR014107 Cytochrome c oxidase cbb3-type, CcoQ YH65_09855 11850a389564916d67c5ffed7739382a 255 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 2 115 1.0E-26 T 11-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 YH65_09855 11850a389564916d67c5ffed7739382a 255 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 139 156 - T 11-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 YH65_09855 11850a389564916d67c5ffed7739382a 255 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 2 254 31.497 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 YH65_09855 11850a389564916d67c5ffed7739382a 255 SUPERFAMILY SSF51735 1 255 2.18E-37 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily YH65_09855 11850a389564916d67c5ffed7739382a 255 Gene3D G3DSA:3.40.50.720 5 253 1.3E-83 T 11-10-2018 YH65_09855 11850a389564916d67c5ffed7739382a 255 Gene3D G3DSA:3.30.360.10 117 223 1.3E-83 T 11-10-2018 YH65_09855 11850a389564916d67c5ffed7739382a 255 PIRSF PIRSF000161 1 255 5.5E-83 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 YH65_09855 11850a389564916d67c5ffed7739382a 255 SUPERFAMILY SSF55347 118 225 8.28E-33 T 11-10-2018 YH65_09855 11850a389564916d67c5ffed7739382a 255 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 2 254 1.8E-74 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 YH65_09855 11850a389564916d67c5ffed7739382a 255 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 118 253 2.6E-39 T 11-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 YH65_10885 614a3880ab1f7d0ecb50c6a076f4a069 789 Pfam PF03477 ATP cone domain 3 88 5.0E-14 T 11-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 YH65_10885 614a3880ab1f7d0ecb50c6a076f4a069 789 SUPERFAMILY SSF51998 213 771 1.05E-175 T 11-10-2018 YH65_10885 614a3880ab1f7d0ecb50c6a076f4a069 789 Pfam PF02867 Ribonucleotide reductase, barrel domain 214 766 5.8E-169 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 YH65_10885 614a3880ab1f7d0ecb50c6a076f4a069 789 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 639 661 - T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 YH65_10885 614a3880ab1f7d0ecb50c6a076f4a069 789 PRINTS PR01183 Ribonucleotide reductase large chain signature 509 532 1.6E-44 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 YH65_10885 614a3880ab1f7d0ecb50c6a076f4a069 789 PRINTS PR01183 Ribonucleotide reductase large chain signature 421 432 1.6E-44 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 YH65_10885 614a3880ab1f7d0ecb50c6a076f4a069 789 PRINTS PR01183 Ribonucleotide reductase large chain signature 575 598 1.6E-44 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 YH65_10885 614a3880ab1f7d0ecb50c6a076f4a069 789 PRINTS PR01183 Ribonucleotide reductase large chain signature 289 308 1.6E-44 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 YH65_10885 614a3880ab1f7d0ecb50c6a076f4a069 789 PRINTS PR01183 Ribonucleotide reductase large chain signature 547 569 1.6E-44 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 YH65_10885 614a3880ab1f7d0ecb50c6a076f4a069 789 PRINTS PR01183 Ribonucleotide reductase large chain signature 650 677 1.6E-44 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 YH65_10885 614a3880ab1f7d0ecb50c6a076f4a069 789 SUPERFAMILY SSF48168 7 212 2.35E-64 T 11-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 YH65_10885 614a3880ab1f7d0ecb50c6a076f4a069 789 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 136 210 1.8E-23 T 11-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 YH65_10885 614a3880ab1f7d0ecb50c6a076f4a069 789 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 139 770 2.6E-188 T 11-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 YH65_06940 b9616c476e7c4bf97a4adee2cc8e12c9 353 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 108 348 7.6E-81 T 11-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria YH65_06940 b9616c476e7c4bf97a4adee2cc8e12c9 353 Gene3D G3DSA:3.30.750.24 1 87 2.6E-6 T 11-10-2018 IPR036513 STAS domain superfamily YH65_06940 b9616c476e7c4bf97a4adee2cc8e12c9 353 Pfam PF13466 STAS domain 7 76 5.6E-8 T 11-10-2018 IPR002645 STAS domain YH65_06940 b9616c476e7c4bf97a4adee2cc8e12c9 353 Pfam PF02405 Permease MlaE 137 347 7.6E-74 T 11-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 YH65_06940 b9616c476e7c4bf97a4adee2cc8e12c9 353 SUPERFAMILY SSF52091 5 76 1.75E-7 T 11-10-2018 IPR036513 STAS domain superfamily YH65_04610 436de6ecd805c9c7e68f6e28b7959edc 505 Pfam PF00474 Sodium:solute symporter family 38 437 2.6E-25 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 YH65_04610 436de6ecd805c9c7e68f6e28b7959edc 505 Gene3D G3DSA:1.20.1730.10 27 504 2.1E-88 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily YH65_03510 0d5308caec17421349a026bfd7632e18 213 Gene3D G3DSA:1.25.40.10 55 151 5.4E-16 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YH65_03510 0d5308caec17421349a026bfd7632e18 213 Pfam PF13181 Tetratricopeptide repeat 105 131 5.0E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 YH65_03510 0d5308caec17421349a026bfd7632e18 213 Gene3D G3DSA:1.25.40.10 152 212 4.3E-14 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YH65_03510 0d5308caec17421349a026bfd7632e18 213 SMART SM00028 64 97 57.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 YH65_03510 0d5308caec17421349a026bfd7632e18 213 SMART SM00028 98 131 0.2 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 YH65_03510 0d5308caec17421349a026bfd7632e18 213 SMART SM00028 166 199 0.0049 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 YH65_03510 0d5308caec17421349a026bfd7632e18 213 SMART SM00028 132 165 0.0034 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 YH65_03510 0d5308caec17421349a026bfd7632e18 213 SUPERFAMILY SSF48452 61 198 1.77E-29 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YH65_03510 0d5308caec17421349a026bfd7632e18 213 Pfam PF13424 Tetratricopeptide repeat 137 195 2.4E-9 T 11-10-2018 YH65_11035 4d1890141574cb4b71fb6eaed3c4409e 353 SUPERFAMILY SSF52540 3 143 1.89E-6 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_11035 4d1890141574cb4b71fb6eaed3c4409e 353 Gene3D G3DSA:3.40.50.300 1 200 2.0E-28 T 11-10-2018 YH65_11035 4d1890141574cb4b71fb6eaed3c4409e 353 Pfam PF05707 Zonular occludens toxin (Zot) 1 197 4.4E-11 T 11-10-2018 IPR008900 Zona occludens toxin YH65_06810 954400437056953bc46e2adc8e001bf4 286 SMART SM00729 55 261 2.4E-11 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 YH65_06810 954400437056953bc46e2adc8e001bf4 286 PIRSF PIRSF005963 1 286 4.9E-121 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 YH65_06810 954400437056953bc46e2adc8e001bf4 286 Gene3D G3DSA:3.20.20.70 4 251 1.7E-19 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YH65_06810 954400437056953bc46e2adc8e001bf4 286 Hamap MF_00206 Lipoyl synthase [lipA]. 1 286 119.287 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 YH65_06810 954400437056953bc46e2adc8e001bf4 286 Pfam PF04055 Radical SAM superfamily 63 220 1.9E-10 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 YH65_06810 954400437056953bc46e2adc8e001bf4 286 SUPERFAMILY SSF102114 22 282 4.45E-53 T 11-10-2018 YH65_06810 954400437056953bc46e2adc8e001bf4 286 TIGRFAM TIGR00510 lipA: lipoyl synthase 4 283 1.7E-103 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 YH65_03345 e8e879c7d52d916da5030cbb8f636357 224 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YH65_03345 e8e879c7d52d916da5030cbb8f636357 224 Pfam PF00005 ABC transporter 23 169 7.1E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YH65_03345 e8e879c7d52d916da5030cbb8f636357 224 SMART SM00382 31 220 1.7E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain YH65_03345 e8e879c7d52d916da5030cbb8f636357 224 SUPERFAMILY SSF52540 5 221 7.28E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_03345 e8e879c7d52d916da5030cbb8f636357 224 Gene3D G3DSA:3.40.50.300 1 223 1.2E-57 T 11-10-2018 YH65_06615 6bc0ed2f09783c4461b4b3ee752fcdde 318 SUPERFAMILY SSF51395 11 311 8.18E-83 T 11-10-2018 YH65_06615 6bc0ed2f09783c4461b4b3ee752fcdde 318 Pfam PF01207 Dihydrouridine synthase (Dus) 13 310 5.2E-82 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 YH65_06615 6bc0ed2f09783c4461b4b3ee752fcdde 318 Gene3D G3DSA:3.20.20.70 8 245 6.0E-77 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YH65_06615 6bc0ed2f09783c4461b4b3ee752fcdde 318 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 13 311 1.0E-88 T 11-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 YH65_06615 6bc0ed2f09783c4461b4b3ee752fcdde 318 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 11-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 YH65_06615 6bc0ed2f09783c4461b4b3ee752fcdde 318 Gene3D G3DSA:1.10.1200.80 246 317 4.5E-8 T 11-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 YH65_06615 6bc0ed2f09783c4461b4b3ee752fcdde 318 PIRSF PIRSF006621 2 318 1.3E-88 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 YH65_01725 085ed06e57624ba350f9ee42d522e898 340 Pfam PF01594 AI-2E family transporter 4 327 9.3E-42 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like YH65_04940 fe808e619a6671114a3ef74a07b82c50 74 Pfam PF11146 Protein of unknown function (DUF2905) 5 69 8.8E-26 T 11-10-2018 IPR021320 Protein of unknown function DUF2905 YH65_00760 0095c6b4ce7528641b214cc7c7ce83f6 201 Pfam PF00005 ABC transporter 6 147 7.8E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YH65_00760 0095c6b4ce7528641b214cc7c7ce83f6 201 Gene3D G3DSA:3.40.50.300 1 201 4.5E-52 T 11-10-2018 YH65_00760 0095c6b4ce7528641b214cc7c7ce83f6 201 SUPERFAMILY SSF52540 4 198 5.02E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_00760 0095c6b4ce7528641b214cc7c7ce83f6 201 SMART SM00382 15 194 2.2E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain YH65_00760 0095c6b4ce7528641b214cc7c7ce83f6 201 ProSitePatterns PS00211 ABC transporters family signature. 119 133 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YH65_05520 66880723521c9a875c0356007acfd572 304 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 106 288 2.4E-14 T 11-10-2018 YH65_04420 d1c092b714f2f33b538d12f1a7ed0ac4 151 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 27.44 T 11-10-2018 IPR003791 Protein of unknown function UPF0178 YH65_04420 d1c092b714f2f33b538d12f1a7ed0ac4 151 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 17 145 1.2E-43 T 11-10-2018 IPR003791 Protein of unknown function UPF0178 YH65_05185 40eda37574db4610f260f623e926bcaa 183 SMART SM00382 21 169 0.0095 T 11-10-2018 IPR003593 AAA+ ATPase domain YH65_05185 40eda37574db4610f260f623e926bcaa 183 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 25 142 1.0E-25 T 11-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 YH65_05185 40eda37574db4610f260f623e926bcaa 183 Gene3D G3DSA:3.40.50.300 20 182 8.7E-36 T 11-10-2018 YH65_05185 40eda37574db4610f260f623e926bcaa 183 SUPERFAMILY SSF52540 25 177 4.8E-19 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_05185 40eda37574db4610f260f623e926bcaa 183 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 26 178 4.5E-34 T 11-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 YH65_08240 d5e2b6da658a8bf6c86ba996ea90363e 188 SUPERFAMILY SSF53323 7 181 1.7E-35 T 11-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 YH65_08240 d5e2b6da658a8bf6c86ba996ea90363e 188 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 12 175 2.9E-29 T 11-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 YH65_08240 d5e2b6da658a8bf6c86ba996ea90363e 188 Gene3D G3DSA:3.40.920.10 2 187 9.6E-57 T 11-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 YH65_10000 2dd119eb2cf25870c649c862fbff947b 326 Gene3D G3DSA:3.20.20.70 1 325 2.4E-82 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YH65_10000 2dd119eb2cf25870c649c862fbff947b 326 Pfam PF13394 4Fe-4S single cluster domain 18 103 1.8E-8 T 11-10-2018 YH65_10000 2dd119eb2cf25870c649c862fbff947b 326 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 17 28 - T 11-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 YH65_10000 2dd119eb2cf25870c649c862fbff947b 326 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 2 326 36.367 T 11-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 YH65_10000 2dd119eb2cf25870c649c862fbff947b 326 SMART SM00729 11 212 2.3E-11 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 YH65_10000 2dd119eb2cf25870c649c862fbff947b 326 Pfam PF04055 Radical SAM superfamily 15 175 1.6E-26 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 YH65_10000 2dd119eb2cf25870c649c862fbff947b 326 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 2 326 2.5E-108 T 11-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 YH65_10000 2dd119eb2cf25870c649c862fbff947b 326 SUPERFAMILY SSF102114 2 271 3.14E-71 T 11-10-2018 YH65_10000 2dd119eb2cf25870c649c862fbff947b 326 Pfam PF06463 Molybdenum Cofactor Synthesis C 181 303 1.8E-28 T 11-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 YH65_09290 d925cfea6a13e01db9d15ac5a9cdd9a7 74 Gene3D G3DSA:1.10.720.30 15 73 2.0E-30 T 11-10-2018 IPR036361 SAP domain superfamily YH65_09290 d925cfea6a13e01db9d15ac5a9cdd9a7 74 Pfam PF09905 DNA-binding protein VF530 8 69 4.2E-35 T 11-10-2018 IPR018668 DNA-binding protein VF530-like GO:0003677 YH65_01740 f57c640d5dec10633f180d465a146e07 434 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 70 81 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YH65_01740 f57c640d5dec10633f180d465a146e07 434 Pfam PF13534 4Fe-4S dicluster domain 19 84 4.0E-9 T 11-10-2018 YH65_01740 f57c640d5dec10633f180d465a146e07 434 Pfam PF02754 Cysteine-rich domain 187 271 1.8E-13 T 11-10-2018 IPR004017 Cysteine-rich domain YH65_01740 f57c640d5dec10633f180d465a146e07 434 Pfam PF02754 Cysteine-rich domain 326 409 1.4E-12 T 11-10-2018 IPR004017 Cysteine-rich domain YH65_01740 f57c640d5dec10633f180d465a146e07 434 SUPERFAMILY SSF46548 15 98 1.6E-17 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 YH65_01740 f57c640d5dec10633f180d465a146e07 434 PIRSF PIRSF000139 2 434 7.5E-109 T 11-10-2018 YH65_01740 f57c640d5dec10633f180d465a146e07 434 Gene3D G3DSA:1.10.1060.10 2 101 1.4E-7 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 YH65_07145 94053a8fabb0ae0f3538ff5297c712e6 124 SMART SM00422 10 79 1.7E-24 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 YH65_07145 94053a8fabb0ae0f3538ff5297c712e6 124 SUPERFAMILY SSF46955 10 98 5.04E-20 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily YH65_07145 94053a8fabb0ae0f3538ff5297c712e6 124 Gene3D G3DSA:1.10.1660.10 9 103 8.5E-28 T 11-10-2018 YH65_07145 94053a8fabb0ae0f3538ff5297c712e6 124 ProSitePatterns PS00552 MerR-type HTH domain signature. 13 35 - T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 YH65_07145 94053a8fabb0ae0f3538ff5297c712e6 124 Pfam PF13411 MerR HTH family regulatory protein 10 77 1.4E-16 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 YH65_02820 1c5c93dae0cea30f275a0e9005b505ef 287 Gene3D G3DSA:2.40.50.140 156 221 3.7E-8 T 11-10-2018 YH65_02820 1c5c93dae0cea30f275a0e9005b505ef 287 SMART SM00316 12 74 46.0 T 11-10-2018 IPR022967 RNA-binding domain, S1 YH65_02820 1c5c93dae0cea30f275a0e9005b505ef 287 SMART SM00316 154 216 0.0016 T 11-10-2018 IPR022967 RNA-binding domain, S1 YH65_02820 1c5c93dae0cea30f275a0e9005b505ef 287 SMART SM00316 79 141 9.4 T 11-10-2018 IPR022967 RNA-binding domain, S1 YH65_02820 1c5c93dae0cea30f275a0e9005b505ef 287 PIRSF PIRSF012524 9 287 6.2E-73 T 11-10-2018 IPR014464 Conserved virulence factor B YH65_02820 1c5c93dae0cea30f275a0e9005b505ef 287 Pfam PF13509 S1 domain 13 74 1.1E-24 T 11-10-2018 IPR039566 Conserved virulence factor B, S1 domain YH65_02820 1c5c93dae0cea30f275a0e9005b505ef 287 Gene3D G3DSA:1.10.10.10 226 287 4.2E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YH65_02820 1c5c93dae0cea30f275a0e9005b505ef 287 SUPERFAMILY SSF50249 144 217 4.76E-5 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold YH65_05240 56d0c4caf66e2eafd8bd3e20c43a0409 120 SUPERFAMILY SSF117916 17 118 3.6E-23 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily YH65_05240 56d0c4caf66e2eafd8bd3e20c43a0409 120 Pfam PF01883 Iron-sulfur cluster assembly protein 22 83 1.5E-9 T 11-10-2018 IPR002744 MIP18 family-like YH65_05240 56d0c4caf66e2eafd8bd3e20c43a0409 120 Gene3D G3DSA:3.30.300.130 11 119 1.0E-30 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily YH65_00310 cf6aa4a3280cc77ae3b4bb3769aec72a 442 Pfam PF06097 Bacterial protein of unknown function (DUF945) 175 403 4.2E-8 T 11-10-2018 IPR010352 Protein of unknown function DUF945 YH65_04035 06b72e283a4bf3f8b4a2832398e9a9a1 202 Gene3D G3DSA:3.40.50.2020 51 200 1.5E-9 T 11-10-2018 YH65_04035 06b72e283a4bf3f8b4a2832398e9a9a1 202 SUPERFAMILY SSF53271 43 192 9.83E-15 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like YH65_00170 73f661b88b9410727a25fe5369faea10 777 SUPERFAMILY SSF52540 37 446 5.03E-37 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_00170 73f661b88b9410727a25fe5369faea10 777 Pfam PF01935 Domain of unknown function DUF87 30 81 1.4E-7 T 11-10-2018 IPR002789 Helicase HerA, central domain YH65_00170 73f661b88b9410727a25fe5369faea10 777 Gene3D G3DSA:3.40.50.300 268 437 3.2E-16 T 11-10-2018 YH65_00170 73f661b88b9410727a25fe5369faea10 777 Gene3D G3DSA:3.40.50.300 1 101 7.2E-9 T 11-10-2018 YH65_10250 ee18b8f2aa54e14ef981390a79921950 374 SUPERFAMILY SSF52540 5 230 1.84E-14 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_10250 ee18b8f2aa54e14ef981390a79921950 374 Gene3D G3DSA:3.40.50.300 1 301 8.5E-14 T 11-10-2018 YH65_05735 8389b811ac83ecc8dac55e3332d374c6 203 PIRSF PIRSF004553 11 200 8.8E-38 T 11-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 YH65_05735 8389b811ac83ecc8dac55e3332d374c6 203 SUPERFAMILY SSF53335 12 198 2.82E-28 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YH65_05735 8389b811ac83ecc8dac55e3332d374c6 203 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 8 198 4.1E-40 T 11-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 YH65_05735 8389b811ac83ecc8dac55e3332d374c6 203 Pfam PF03602 Conserved hypothetical protein 95 13 198 7.0E-39 T 11-10-2018 YH65_05735 8389b811ac83ecc8dac55e3332d374c6 203 Gene3D G3DSA:3.40.50.150 1 202 4.3E-37 T 11-10-2018 YH65_04910 d5aefbde94349d3707c7994b6aed7dae 174 SUPERFAMILY SSF52949 2 172 1.85E-56 T 11-10-2018 YH65_04910 d5aefbde94349d3707c7994b6aed7dae 174 Pfam PF01661 Macro domain 21 139 8.4E-42 T 11-10-2018 IPR002589 Macro domain YH65_04910 d5aefbde94349d3707c7994b6aed7dae 174 Gene3D G3DSA:3.40.220.10 1 174 1.5E-63 T 11-10-2018 YH65_04910 d5aefbde94349d3707c7994b6aed7dae 174 SMART SM00506 4 139 3.5E-44 T 11-10-2018 IPR002589 Macro domain YH65_02185 e222c8134765a331886319ca004cf228 80 Gene3D G3DSA:3.40.30.10 5 80 1.5E-21 T 11-10-2018 YH65_02185 e222c8134765a331886319ca004cf228 80 Pfam PF00462 Glutaredoxin 8 63 4.3E-14 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 YH65_02185 e222c8134765a331886319ca004cf228 80 SUPERFAMILY SSF52833 4 78 3.6E-17 T 11-10-2018 IPR036249 Thioredoxin-like superfamily YH65_00940 8d689b5b0f53a675890dad85752883c9 297 SUPERFAMILY SSF52540 5 155 4.3E-8 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_03815 77ce3afc34e990fa3573f8eaf082ab63 168 SUPERFAMILY SSF53955 45 94 2.14E-5 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily YH65_03815 77ce3afc34e990fa3573f8eaf082ab63 168 Gene3D G3DSA:1.10.530.10 26 166 9.0E-13 T 11-10-2018 YH65_04325 7b5b24b7c9bf208d740c82ac3ca5ee44 455 Pfam PF02646 RmuC family 148 445 1.4E-101 T 11-10-2018 IPR003798 DNA recombination RmuC YH65_05690 e948fb0d976d4f51a870901fae273176 271 Pfam PF00106 short chain dehydrogenase 3 188 2.9E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YH65_05690 e948fb0d976d4f51a870901fae273176 271 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 6.2E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YH65_05690 e948fb0d976d4f51a870901fae273176 271 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 6.2E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YH65_05690 e948fb0d976d4f51a870901fae273176 271 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 6.2E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YH65_05690 e948fb0d976d4f51a870901fae273176 271 SUPERFAMILY SSF51735 4 266 1.39E-50 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily YH65_05690 e948fb0d976d4f51a870901fae273176 271 Gene3D G3DSA:3.40.50.720 4 258 5.8E-55 T 11-10-2018 YH65_05690 e948fb0d976d4f51a870901fae273176 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 1.1E-16 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YH65_05690 e948fb0d976d4f51a870901fae273176 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 1.1E-16 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YH65_05690 e948fb0d976d4f51a870901fae273176 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 1.1E-16 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YH65_05690 e948fb0d976d4f51a870901fae273176 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 1.1E-16 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR YH65_05690 e948fb0d976d4f51a870901fae273176 271 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 132 160 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 YH65_10465 4adebe52d1b1e3ad8001a4a37abb4fe1 118 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 1 114 28.628 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_10465 4adebe52d1b1e3ad8001a4a37abb4fe1 118 Gene3D G3DSA:1.10.720.90 1 54 1.4E-21 T 11-10-2018 YH65_10465 4adebe52d1b1e3ad8001a4a37abb4fe1 118 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 20 71 2.0E-12 T 11-10-2018 YH65_10465 4adebe52d1b1e3ad8001a4a37abb4fe1 118 PRINTS PR00062 Ribosomal protein L20 signature 11 40 5.3E-38 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_10465 4adebe52d1b1e3ad8001a4a37abb4fe1 118 PRINTS PR00062 Ribosomal protein L20 signature 41 70 5.3E-38 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_10465 4adebe52d1b1e3ad8001a4a37abb4fe1 118 PRINTS PR00062 Ribosomal protein L20 signature 74 100 5.3E-38 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_10465 4adebe52d1b1e3ad8001a4a37abb4fe1 118 Gene3D G3DSA:1.10.1900.20 55 117 7.3E-29 T 11-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_10465 4adebe52d1b1e3ad8001a4a37abb4fe1 118 Pfam PF00453 Ribosomal protein L20 2 108 2.2E-45 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_10465 4adebe52d1b1e3ad8001a4a37abb4fe1 118 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 113 6.6E-48 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_10465 4adebe52d1b1e3ad8001a4a37abb4fe1 118 SUPERFAMILY SSF74731 1 116 3.79E-46 T 11-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_10465 4adebe52d1b1e3ad8001a4a37abb4fe1 118 ProSitePatterns PS00937 Ribosomal protein L20 signature. 53 69 - T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_01825 852c807acfc040676904fce9a6ea91dd 322 SUPERFAMILY SSF56322 48 319 7.46E-67 T 11-10-2018 IPR005801 ADC synthase GO:0009058 YH65_01825 852c807acfc040676904fce9a6ea91dd 322 Gene3D G3DSA:3.60.120.10 5 322 1.2E-70 T 11-10-2018 IPR005801 ADC synthase GO:0009058 YH65_01825 852c807acfc040676904fce9a6ea91dd 322 PRINTS PR00095 Anthranilate synthase component I signature 162 175 4.7E-9 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 YH65_01825 852c807acfc040676904fce9a6ea91dd 322 PRINTS PR00095 Anthranilate synthase component I signature 176 189 4.7E-9 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 YH65_01825 852c807acfc040676904fce9a6ea91dd 322 PRINTS PR00095 Anthranilate synthase component I signature 260 274 4.7E-9 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 YH65_01825 852c807acfc040676904fce9a6ea91dd 322 Pfam PF00425 chorismate binding enzyme 76 317 4.0E-63 T 11-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal YH65_05250 98e31877435c28ae9dca3caa9d8cabd6 397 SUPERFAMILY SSF101960 25 385 1.57E-63 T 11-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily YH65_05250 98e31877435c28ae9dca3caa9d8cabd6 397 Pfam PF01458 Uncharacterized protein family (UPF0051) 118 363 1.1E-49 T 11-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 YH65_03940 841d28d5b94d52ee24d3dc143ce5c0a3 401 Pfam PF00188 Cysteine-rich secretory protein family 25 147 1.5E-8 T 11-10-2018 IPR014044 CAP domain YH65_03940 841d28d5b94d52ee24d3dc143ce5c0a3 401 SUPERFAMILY SSF55797 20 147 3.66E-8 T 11-10-2018 IPR035940 CAP superfamily YH65_03940 841d28d5b94d52ee24d3dc143ce5c0a3 401 Gene3D G3DSA:3.40.33.10 15 147 2.9E-16 T 11-10-2018 IPR035940 CAP superfamily YH65_07900 5d7d8460d58509dbdfc783c63e20d41e 198 SUPERFAMILY SSF52833 2 195 9.39E-67 T 11-10-2018 IPR036249 Thioredoxin-like superfamily YH65_07900 5d7d8460d58509dbdfc783c63e20d41e 198 PIRSF PIRSF000239 1 197 1.3E-59 T 11-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 YH65_07900 5d7d8460d58509dbdfc783c63e20d41e 198 Pfam PF00578 AhpC/TSA family 3 137 2.8E-33 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 YH65_07900 5d7d8460d58509dbdfc783c63e20d41e 198 Gene3D G3DSA:3.40.30.10 1 195 2.8E-73 T 11-10-2018 YH65_07900 5d7d8460d58509dbdfc783c63e20d41e 198 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 158 193 3.1E-11 T 11-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 YH65_01915 4580c7ecc03df094712dc524ec479e2a 137 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 112 120 - T 11-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 YH65_01915 4580c7ecc03df094712dc524ec479e2a 137 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 1 136 34.785 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YH65_01915 4580c7ecc03df094712dc524ec479e2a 137 SMART SM00562 1 137 6.5E-77 T 11-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YH65_01915 4580c7ecc03df094712dc524ec479e2a 137 Pfam PF00334 Nucleoside diphosphate kinase 2 136 3.3E-54 T 11-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YH65_01915 4580c7ecc03df094712dc524ec479e2a 137 PRINTS PR01243 Nucleoside diphosphate kinase signature 89 105 4.9E-42 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YH65_01915 4580c7ecc03df094712dc524ec479e2a 137 PRINTS PR01243 Nucleoside diphosphate kinase signature 48 67 4.9E-42 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YH65_01915 4580c7ecc03df094712dc524ec479e2a 137 PRINTS PR01243 Nucleoside diphosphate kinase signature 112 131 4.9E-42 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YH65_01915 4580c7ecc03df094712dc524ec479e2a 137 PRINTS PR01243 Nucleoside diphosphate kinase signature 4 26 4.9E-42 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YH65_01915 4580c7ecc03df094712dc524ec479e2a 137 PRINTS PR01243 Nucleoside diphosphate kinase signature 68 85 4.9E-42 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YH65_01915 4580c7ecc03df094712dc524ec479e2a 137 Gene3D G3DSA:3.30.70.141 1 137 2.8E-57 T 11-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YH65_01915 4580c7ecc03df094712dc524ec479e2a 137 SUPERFAMILY SSF54919 1 136 1.96E-55 T 11-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YH65_01615 14bc34613b20355e2f94b0c9069aa947 335 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 1 333 1.8E-112 T 11-10-2018 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 YH65_01615 14bc34613b20355e2f94b0c9069aa947 335 Gene3D G3DSA:3.75.10.10 1 334 2.2E-119 T 11-10-2018 YH65_01615 14bc34613b20355e2f94b0c9069aa947 335 SUPERFAMILY SSF55909 1 333 4.1E-112 T 11-10-2018 YH65_03545 eac99c13da93549f817e93cf17b97325 649 Gene3D G3DSA:1.10.1370.40 12 644 4.3E-212 T 11-10-2018 YH65_03545 eac99c13da93549f817e93cf17b97325 649 Gene3D G3DSA:1.10.1370.10 124 579 4.3E-212 T 11-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 YH65_03545 eac99c13da93549f817e93cf17b97325 649 SUPERFAMILY SSF55486 5 646 1.71E-163 T 11-10-2018 YH65_03545 eac99c13da93549f817e93cf17b97325 649 Pfam PF01432 Peptidase family M3 205 644 1.8E-122 T 11-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 YH65_07780 c026a5f6bf37ceab3519a81d855cb5bb 212 Pfam PF00072 Response regulator receiver domain 5 114 7.0E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YH65_07780 c026a5f6bf37ceab3519a81d855cb5bb 212 SMART SM00862 143 209 8.2E-4 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YH65_07780 c026a5f6bf37ceab3519a81d855cb5bb 212 Gene3D G3DSA:1.10.10.10 119 212 3.7E-11 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YH65_07780 c026a5f6bf37ceab3519a81d855cb5bb 212 Gene3D G3DSA:3.40.50.2300 3 118 2.1E-27 T 11-10-2018 YH65_07780 c026a5f6bf37ceab3519a81d855cb5bb 212 SUPERFAMILY SSF52172 3 170 1.1E-30 T 11-10-2018 IPR011006 CheY-like superfamily YH65_07780 c026a5f6bf37ceab3519a81d855cb5bb 212 SMART SM00448 3 114 1.9E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 YH65_10425 86a7a811a33594988314a6f4ed5a6835 390 Pfam PF00034 Cytochrome c 100 199 4.4E-10 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YH65_10425 86a7a811a33594988314a6f4ed5a6835 390 Gene3D G3DSA:1.10.760.10 74 232 1.2E-51 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_10425 86a7a811a33594988314a6f4ed5a6835 390 SUPERFAMILY SSF46626 310 386 5.42E-17 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_10425 86a7a811a33594988314a6f4ed5a6835 390 PRINTS PR00607 Class IE cytochrome C signature 360 372 1.3E-12 T 11-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 YH65_10425 86a7a811a33594988314a6f4ed5a6835 390 PRINTS PR00607 Class IE cytochrome C signature 321 332 1.3E-12 T 11-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 YH65_10425 86a7a811a33594988314a6f4ed5a6835 390 PRINTS PR00607 Class IE cytochrome C signature 332 342 1.3E-12 T 11-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 YH65_10425 86a7a811a33594988314a6f4ed5a6835 390 PRINTS PR00607 Class IE cytochrome C signature 375 386 1.3E-12 T 11-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 YH65_10425 86a7a811a33594988314a6f4ed5a6835 390 Gene3D G3DSA:1.10.760.10 310 388 5.5E-29 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_10425 86a7a811a33594988314a6f4ed5a6835 390 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 311 385 6.8E-15 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YH65_10425 86a7a811a33594988314a6f4ed5a6835 390 SUPERFAMILY SSF46626 79 210 7.03E-19 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_08120 2641e3b06885dee56eb773ba7e2c3821 290 Pfam PF07751 Abi-like protein 36 215 6.3E-50 T 11-10-2018 IPR011664 Abortive infection system protein AbiD/AbiF-like YH65_08120 2641e3b06885dee56eb773ba7e2c3821 290 PIRSF PIRSF034934 5 289 1.1E-57 T 11-10-2018 IPR017034 Abortive infection system protein AbiD/AbiF YH65_02465 ebe3ccde63d4891046b50cfcebb1696d 300 SUPERFAMILY SSF103481 45 143 2.22E-14 T 11-10-2018 YH65_02465 ebe3ccde63d4891046b50cfcebb1696d 300 Pfam PF00892 EamA-like transporter family 10 139 1.2E-19 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 YH65_02465 ebe3ccde63d4891046b50cfcebb1696d 300 Pfam PF00892 EamA-like transporter family 151 293 1.3E-8 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 YH65_02465 ebe3ccde63d4891046b50cfcebb1696d 300 SUPERFAMILY SSF103481 208 297 4.71E-11 T 11-10-2018 YH65_05040 a7caa467289c2a0454f1644586db50cc 89 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 16 88 1.0E-10 T 11-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family YH65_05040 a7caa467289c2a0454f1644586db50cc 89 Gene3D G3DSA:3.30.2310.20 1 89 1.3E-18 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily YH65_05040 a7caa467289c2a0454f1644586db50cc 89 SUPERFAMILY SSF143011 4 85 2.09E-19 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily YH65_05040 a7caa467289c2a0454f1644586db50cc 89 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 10 88 8.4E-9 T 11-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family YH65_05450 038a5a53a0e07b606e4b663ba5458bd8 562 SUPERFAMILY SSF50182 342 422 6.21E-6 T 11-10-2018 IPR010920 LSM domain superfamily YH65_05450 038a5a53a0e07b606e4b663ba5458bd8 562 Pfam PF00924 Mechanosensitive ion channel 298 512 2.4E-32 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 YH65_09985 03b67a337fbf91a2fc94ed51d7531b37 444 SUPERFAMILY SSF103473 5 380 1.02E-65 T 11-10-2018 IPR036259 MFS transporter superfamily YH65_09985 03b67a337fbf91a2fc94ed51d7531b37 444 Pfam PF07690 Major Facilitator Superfamily 9 255 4.1E-37 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YH65_09985 03b67a337fbf91a2fc94ed51d7531b37 444 Gene3D G3DSA:1.20.1250.20 3 382 5.8E-81 T 11-10-2018 YH65_01975 81bf84557673e9c31170120851e7d6d3 395 TIGRFAM TIGR01499 folC: bifunctional protein FolC 27 389 1.0E-82 T 11-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 YH65_01975 81bf84557673e9c31170120851e7d6d3 395 SUPERFAMILY SSF53244 278 392 2.75E-15 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 YH65_01975 81bf84557673e9c31170120851e7d6d3 395 Gene3D G3DSA:3.40.1190.10 4 274 9.1E-65 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 YH65_01975 81bf84557673e9c31170120851e7d6d3 395 SUPERFAMILY SSF53623 13 272 1.03E-58 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 YH65_01975 81bf84557673e9c31170120851e7d6d3 395 Gene3D G3DSA:3.90.190.20 278 394 1.5E-14 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 YH65_01975 81bf84557673e9c31170120851e7d6d3 395 Pfam PF08245 Mur ligase middle domain 44 237 2.9E-6 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 YH65_06900 844bb18916862873a566162dba1f8a83 448 Pfam PF03929 PepSY-associated TM region 5 436 1.2E-15 T 11-10-2018 IPR005625 PepSY-associated TM protein YH65_06900 844bb18916862873a566162dba1f8a83 448 SUPERFAMILY SSF110296 58 346 3.66E-6 T 11-10-2018 YH65_08800 ef0d94a13d160f9bfb54913a9d9ea661 201 Pfam PF02674 Colicin V production protein 7 153 4.7E-30 T 11-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 YH65_09015 8c9cbfdde32b8906b8303185dad78cde 341 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 4 331 44.593 T 11-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 YH65_09015 8c9cbfdde32b8906b8303185dad78cde 341 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 186 329 3.3E-63 T 11-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 YH65_09015 8c9cbfdde32b8906b8303185dad78cde 341 PIRSF PIRSF000116 205 335 3.6E-11 T 11-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 YH65_09015 8c9cbfdde32b8906b8303185dad78cde 341 PIRSF PIRSF000116 5 209 6.9E-44 T 11-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 YH65_09015 8c9cbfdde32b8906b8303185dad78cde 341 Gene3D G3DSA:1.10.3730.40 185 341 5.5E-71 T 11-10-2018 YH65_09015 8c9cbfdde32b8906b8303185dad78cde 341 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 17 179 3.1E-74 T 11-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 YH65_09015 8c9cbfdde32b8906b8303185dad78cde 341 SUPERFAMILY SSF51735 5 185 2.63E-72 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily YH65_09015 8c9cbfdde32b8906b8303185dad78cde 341 Gene3D G3DSA:3.40.50.720 1 184 3.9E-76 T 11-10-2018 YH65_09015 8c9cbfdde32b8906b8303185dad78cde 341 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 17 329 4.3E-133 T 11-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 YH65_09015 8c9cbfdde32b8906b8303185dad78cde 341 SUPERFAMILY SSF48179 186 335 1.7E-68 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 YH65_05730 5497dc7de54a5bbfd4553c3309e842eb 445 Pfam PF12912 NLPC_P60 stabilising domain, N term 14 130 2.3E-25 T 11-10-2018 IPR025606 NLPC/P60, N-terminal domain YH65_05730 5497dc7de54a5bbfd4553c3309e842eb 445 Gene3D G3DSA:3.90.1720.10 280 444 1.4E-40 T 11-10-2018 YH65_05730 5497dc7de54a5bbfd4553c3309e842eb 445 SUPERFAMILY SSF54001 289 388 2.16E-10 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily YH65_05730 5497dc7de54a5bbfd4553c3309e842eb 445 Pfam PF12913 SH3 domain (SH3b1 type) 155 207 3.8E-24 T 11-10-2018 IPR039439 SH3b1 domain YH65_05730 5497dc7de54a5bbfd4553c3309e842eb 445 PIRSF PIRSF019015 1 445 2.1E-144 T 11-10-2018 IPR027017 Uncharacterised peptidase with NlpC/P60 domain, YkfC type YH65_05730 5497dc7de54a5bbfd4553c3309e842eb 445 Pfam PF12914 SH3 domain of SH3b2 type 215 259 2.1E-9 T 11-10-2018 IPR026864 SH3b2-type SH3 domain YH65_05730 5497dc7de54a5bbfd4553c3309e842eb 445 Pfam PF00877 NlpC/P60 family 309 388 2.1E-6 T 11-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain YH65_04195 682342432e1b18326c976a6fff09d6fc 281 Gene3D G3DSA:2.40.30.170 23 267 1.7E-40 T 11-10-2018 YH65_04195 682342432e1b18326c976a6fff09d6fc 281 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 20 268 5.8E-30 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 YH65_04195 682342432e1b18326c976a6fff09d6fc 281 SUPERFAMILY SSF111369 23 267 3.01E-17 T 11-10-2018 YH65_04195 682342432e1b18326c976a6fff09d6fc 281 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 20 262 3.1E-28 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YH65_04195 682342432e1b18326c976a6fff09d6fc 281 Gene3D G3DSA:1.10.287.470 69 151 1.7E-40 T 11-10-2018 YH65_04195 682342432e1b18326c976a6fff09d6fc 281 Gene3D G3DSA:2.40.50.100 35 189 1.7E-40 T 11-10-2018 YH65_10195 9dcde6e96f5d6b521cc262e19293063b 375 Gene3D G3DSA:3.90.1150.10 7 350 6.2E-90 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 YH65_10195 9dcde6e96f5d6b521cc262e19293063b 375 SUPERFAMILY SSF53383 2 349 7.9E-77 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase YH65_10195 9dcde6e96f5d6b521cc262e19293063b 375 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 175 195 - T 11-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site YH65_10195 9dcde6e96f5d6b521cc262e19293063b 375 PIRSF PIRSF000524 1 368 2.8E-94 T 11-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 YH65_10195 9dcde6e96f5d6b521cc262e19293063b 375 Pfam PF00266 Aminotransferase class-V 2 317 6.5E-28 T 11-10-2018 IPR000192 Aminotransferase class V domain YH65_10195 9dcde6e96f5d6b521cc262e19293063b 375 Gene3D G3DSA:3.40.640.10 12 249 6.2E-90 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 YH65_08720 d3cc8250b6049c90483b228c56a375dc 112 SUPERFAMILY SSF81296 10 108 1.39E-27 T 11-10-2018 IPR014756 Immunoglobulin E-set YH65_08720 d3cc8250b6049c90483b228c56a375dc 112 TIGRFAM TIGR04490 SoxZ_true: thiosulfate oxidation carrier complex protein SoxZ 12 107 6.0E-34 T 11-10-2018 IPR030995 Thiosulfate oxidation carrier complex protein SoxZ YH65_08720 d3cc8250b6049c90483b228c56a375dc 112 Gene3D G3DSA:2.60.40.10 4 110 7.1E-31 T 11-10-2018 IPR013783 Immunoglobulin-like fold YH65_08720 d3cc8250b6049c90483b228c56a375dc 112 Pfam PF08770 Sulphur oxidation protein SoxZ 15 106 9.1E-30 T 11-10-2018 IPR014880 Sulphur oxidation protein SoxZ YH65_05245 03e162467952c935a25894e543509456 144 Gene3D G3DSA:3.90.1010.10 3 142 5.2E-30 T 11-10-2018 YH65_05245 03e162467952c935a25894e543509456 144 SUPERFAMILY SSF82649 8 135 1.94E-26 T 11-10-2018 YH65_05245 03e162467952c935a25894e543509456 144 Pfam PF02657 Fe-S metabolism associated domain 12 129 1.4E-28 T 11-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like YH65_03905 cad867aba611642f844eacad1c197ddb 98 Gene3D G3DSA:1.10.760.10 18 96 3.7E-18 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_03905 cad867aba611642f844eacad1c197ddb 98 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 17 94 8.8E-7 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YH65_03905 cad867aba611642f844eacad1c197ddb 98 SUPERFAMILY SSF46626 7 96 4.87E-17 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_09405 8244075751ae15613838a1a50d933a97 435 Pfam PF00999 Sodium/hydrogen exchanger family 11 417 6.2E-24 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 YH65_09370 39f35cd76ecc176215fea05d30d1ea78 294 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 4 284 6.6E-140 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YH65_09370 39f35cd76ecc176215fea05d30d1ea78 294 SUPERFAMILY SSF55681 3 285 3.98E-124 T 11-10-2018 YH65_09370 39f35cd76ecc176215fea05d30d1ea78 294 Gene3D G3DSA:3.30.930.10 1 209 1.3E-106 T 11-10-2018 YH65_09370 39f35cd76ecc176215fea05d30d1ea78 294 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 2 286 57.294 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YH65_09370 39f35cd76ecc176215fea05d30d1ea78 294 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 108 132 3.8E-66 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YH65_09370 39f35cd76ecc176215fea05d30d1ea78 294 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 56 71 3.8E-66 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YH65_09370 39f35cd76ecc176215fea05d30d1ea78 294 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 134 154 3.8E-66 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YH65_09370 39f35cd76ecc176215fea05d30d1ea78 294 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 157 172 3.8E-66 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YH65_09370 39f35cd76ecc176215fea05d30d1ea78 294 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 246 262 3.8E-66 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YH65_09370 39f35cd76ecc176215fea05d30d1ea78 294 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 77 97 3.8E-66 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YH65_09370 39f35cd76ecc176215fea05d30d1ea78 294 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 3 291 2.5E-152 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YH65_09370 39f35cd76ecc176215fea05d30d1ea78 294 Gene3D G3DSA:1.20.58.180 210 288 9.9E-33 T 11-10-2018 YH65_00510 8caf2ecdb20aafb1ce5f4d13dca73072 496 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 15 477 1.8E-117 T 11-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 YH65_00510 8caf2ecdb20aafb1ce5f4d13dca73072 496 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 12 484 16.18 T 11-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 YH65_00510 8caf2ecdb20aafb1ce5f4d13dca73072 496 Pfam PF00361 Proton-conducting membrane transporter 129 428 2.7E-59 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_05410 064ac061d8fc27fbf7a39d605219480d 627 Pfam PF09972 Predicted membrane protein (DUF2207) 21 559 3.4E-71 T 11-10-2018 IPR018702 Protein of unknown function DUF2207, membrane YH65_00045 ff455747fa91cf30626597346142ca56 192 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 8 185 1.1E-78 T 11-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 YH65_00045 ff455747fa91cf30626597346142ca56 192 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 64 80 - T 11-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 YH65_00045 ff455747fa91cf30626597346142ca56 192 SUPERFAMILY SSF55620 4 185 3.19E-81 T 11-10-2018 YH65_00045 ff455747fa91cf30626597346142ca56 192 Pfam PF01227 GTP cyclohydrolase I 8 184 7.6E-80 T 11-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 YH65_00045 ff455747fa91cf30626597346142ca56 192 Gene3D G3DSA:1.10.286.10 2 54 1.6E-21 T 11-10-2018 YH65_00045 ff455747fa91cf30626597346142ca56 192 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 3 185 41.669 T 11-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 YH65_00045 ff455747fa91cf30626597346142ca56 192 Gene3D G3DSA:3.30.1130.10 55 188 1.7E-60 T 11-10-2018 YH65_04965 1e87945fe3c154114b3eb00c29fdcf6b 186 SUPERFAMILY SSF53335 4 169 7.47E-26 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YH65_04965 1e87945fe3c154114b3eb00c29fdcf6b 186 Gene3D G3DSA:3.40.50.150 1 185 4.8E-28 T 11-10-2018 YH65_04965 1e87945fe3c154114b3eb00c29fdcf6b 186 Pfam PF13489 Methyltransferase domain 24 126 3.3E-13 T 11-10-2018 YH65_07180 82ead419cec681dfe2810780c4005cfa 109 SUPERFAMILY SSF81901 38 100 3.92E-9 T 11-10-2018 YH65_07180 82ead419cec681dfe2810780c4005cfa 109 Gene3D G3DSA:1.25.40.10 3 108 1.6E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YH65_07180 82ead419cec681dfe2810780c4005cfa 109 SMART SM00671 55 90 2.0E-5 T 11-10-2018 IPR006597 Sel1-like repeat YH65_06890 25350563d00f82a9d3c6ce4f014f6488 133 SUPERFAMILY SSF52821 7 132 2.49E-21 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily YH65_06890 25350563d00f82a9d3c6ce4f014f6488 133 SMART SM00450 21 129 4.8E-6 T 11-10-2018 IPR001763 Rhodanese-like domain YH65_06890 25350563d00f82a9d3c6ce4f014f6488 133 Pfam PF00581 Rhodanese-like domain 24 121 2.4E-13 T 11-10-2018 IPR001763 Rhodanese-like domain YH65_06890 25350563d00f82a9d3c6ce4f014f6488 133 Gene3D G3DSA:3.40.250.10 9 132 8.3E-20 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily YH65_04260 5c971a29cbb39974082a810ff2472b7e 67 Pfam PF13619 KTSC domain 7 64 3.7E-21 T 11-10-2018 IPR025309 KTSC domain YH65_03935 97c6a1bffd048412f1e31e1516dd9fc3 417 SUPERFAMILY SSF53383 24 413 1.13E-81 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase YH65_03935 97c6a1bffd048412f1e31e1516dd9fc3 417 PIRSF PIRSF001434 3 417 7.8E-93 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 YH65_03935 97c6a1bffd048412f1e31e1516dd9fc3 417 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 18 413 1.6E-92 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 YH65_03935 97c6a1bffd048412f1e31e1516dd9fc3 417 Gene3D G3DSA:3.40.640.10 9 279 3.4E-69 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 YH65_03935 97c6a1bffd048412f1e31e1516dd9fc3 417 Gene3D G3DSA:3.90.1150.10 280 416 8.7E-30 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 YH65_10395 0bd99c65fa84f62a7af90414e1a7e39c 251 SMART SM00028 103 136 1.7E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 YH65_10395 0bd99c65fa84f62a7af90414e1a7e39c 251 SMART SM00028 61 94 0.0031 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 YH65_10395 0bd99c65fa84f62a7af90414e1a7e39c 251 SMART SM00028 187 220 7.0E-5 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 YH65_10395 0bd99c65fa84f62a7af90414e1a7e39c 251 SMART SM00028 145 178 3.2E-6 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 YH65_10395 0bd99c65fa84f62a7af90414e1a7e39c 251 SMART SM00028 19 52 54.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 YH65_10395 0bd99c65fa84f62a7af90414e1a7e39c 251 Pfam PF13424 Tetratricopeptide repeat 21 93 1.4E-11 T 11-10-2018 YH65_10395 0bd99c65fa84f62a7af90414e1a7e39c 251 Pfam PF13424 Tetratricopeptide repeat 145 219 1.3E-21 T 11-10-2018 YH65_10395 0bd99c65fa84f62a7af90414e1a7e39c 251 Gene3D G3DSA:1.25.40.10 20 128 2.2E-21 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YH65_10395 0bd99c65fa84f62a7af90414e1a7e39c 251 Gene3D G3DSA:1.25.40.10 129 249 3.7E-32 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YH65_10395 0bd99c65fa84f62a7af90414e1a7e39c 251 Pfam PF13374 Tetratricopeptide repeat 103 140 3.5E-6 T 11-10-2018 YH65_10395 0bd99c65fa84f62a7af90414e1a7e39c 251 SUPERFAMILY SSF48452 21 218 1.44E-28 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YH65_01625 9f3b3ff4c2661b3593c577060f469b41 514 SUPERFAMILY SSF56112 111 300 7.28E-19 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily YH65_01625 9f3b3ff4c2661b3593c577060f469b41 514 Pfam PF03109 ABC1 family 101 204 3.7E-23 T 11-10-2018 IPR004147 UbiB domain YH65_01625 9f3b3ff4c2661b3593c577060f469b41 514 Gene3D G3DSA:1.10.510.10 242 368 8.4E-6 T 11-10-2018 YH65_05000 d7ab6ab60172c6b09816ed0d00f91427 153 Gene3D G3DSA:1.20.120.30 1 131 1.1E-8 T 11-10-2018 YH65_05000 d7ab6ab60172c6b09816ed0d00f91427 153 Pfam PF13682 Chemoreceptor zinc-binding domain 17 83 6.7E-9 T 11-10-2018 IPR025991 Chemoreceptor zinc-binding domain YH65_07020 e7cfc3ac46e48c6a54e713eaea7ef163 91 Gene3D G3DSA:3.30.2310.20 2 91 5.9E-9 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily YH65_07020 e7cfc3ac46e48c6a54e713eaea7ef163 91 Pfam PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ 3 90 3.5E-7 T 11-10-2018 IPR004386 Toxin-antitoxin system, YafQ-like toxin YH65_07020 e7cfc3ac46e48c6a54e713eaea7ef163 91 SUPERFAMILY SSF143011 1 91 2.49E-18 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily YH65_06125 3e627646bc7db67d9f73daeeaa7b1829 450 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 8 411 2.4E-27 T 11-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 YH65_06125 3e627646bc7db67d9f73daeeaa7b1829 450 SUPERFAMILY SSF51905 9 236 1.58E-19 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_02355 5f30958302e64216af8093f341dcf1d8 450 Gene3D G3DSA:3.40.50.300 2 290 7.8E-47 T 11-10-2018 YH65_02355 5f30958302e64216af8093f341dcf1d8 450 Pfam PF14524 Wzt C-terminal domain 300 437 1.0E-17 T 11-10-2018 IPR029439 Wzt, C-terminal YH65_02355 5f30958302e64216af8093f341dcf1d8 450 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YH65_02355 5f30958302e64216af8093f341dcf1d8 450 Gene3D G3DSA:2.70.50.60 292 435 3.1E-16 T 11-10-2018 YH65_02355 5f30958302e64216af8093f341dcf1d8 450 Pfam PF00005 ABC transporter 44 174 9.1E-22 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YH65_02355 5f30958302e64216af8093f341dcf1d8 450 SMART SM00382 52 242 2.3E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain YH65_02355 5f30958302e64216af8093f341dcf1d8 450 SUPERFAMILY SSF52540 35 243 1.7E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_01620 ea95f5701e6988f277af154816f77e8b 336 Gene3D G3DSA:2.40.37.10 6 331 3.4E-67 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 YH65_01620 ea95f5701e6988f277af154816f77e8b 336 SMART SM01005 222 334 1.1E-28 T 11-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 YH65_01620 ea95f5701e6988f277af154816f77e8b 336 Pfam PF01168 Alanine racemase, N-terminal domain 6 208 2.7E-40 T 11-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 YH65_01620 ea95f5701e6988f277af154816f77e8b 336 SUPERFAMILY SSF50621 217 334 8.37E-27 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 YH65_01620 ea95f5701e6988f277af154816f77e8b 336 TIGRFAM TIGR00492 alr: alanine racemase 2 335 1.5E-60 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 YH65_01620 ea95f5701e6988f277af154816f77e8b 336 Pfam PF00842 Alanine racemase, C-terminal domain 222 332 5.6E-21 T 11-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 YH65_01620 ea95f5701e6988f277af154816f77e8b 336 PRINTS PR00992 Alanine racemase signature 140 151 5.4E-22 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 YH65_01620 ea95f5701e6988f277af154816f77e8b 336 PRINTS PR00992 Alanine racemase signature 255 270 5.4E-22 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 YH65_01620 ea95f5701e6988f277af154816f77e8b 336 PRINTS PR00992 Alanine racemase signature 182 209 5.4E-22 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 YH65_01620 ea95f5701e6988f277af154816f77e8b 336 PRINTS PR00992 Alanine racemase signature 238 253 5.4E-22 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 YH65_01620 ea95f5701e6988f277af154816f77e8b 336 PRINTS PR00992 Alanine racemase signature 25 41 5.4E-22 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 YH65_01620 ea95f5701e6988f277af154816f77e8b 336 SUPERFAMILY SSF51419 6 223 1.12E-39 T 11-10-2018 IPR029066 PLP-binding barrel YH65_01620 ea95f5701e6988f277af154816f77e8b 336 Gene3D G3DSA:3.20.20.10 8 213 3.4E-67 T 11-10-2018 IPR029066 PLP-binding barrel YH65_01620 ea95f5701e6988f277af154816f77e8b 336 Hamap MF_01201 Alanine racemase. 1 334 22.167 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 YH65_07580 ff43bbe53d59bd5b231101475dcfc857 220 Gene3D G3DSA:2.40.160.20 36 220 8.6E-24 T 11-10-2018 YH65_07580 ff43bbe53d59bd5b231101475dcfc857 220 SUPERFAMILY SSF56925 36 220 2.3E-32 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel YH65_07580 ff43bbe53d59bd5b231101475dcfc857 220 Pfam PF13505 Outer membrane protein beta-barrel domain 8 220 2.8E-21 T 11-10-2018 IPR027385 Outer membrane protein beta-barrel YH65_04905 10553b49ac5f2386797f671edb263289 196 Pfam PF09997 Predicted membrane protein (DUF2238) 38 176 4.5E-45 T 11-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 YH65_04905 10553b49ac5f2386797f671edb263289 196 PIRSF PIRSF020606 2 194 1.1E-53 T 11-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 YH65_09155 af7ca2ca986c65258f6356d043951681 184 Pfam PF00406 Adenylate kinase 8 157 6.5E-27 T 11-10-2018 YH65_09155 af7ca2ca986c65258f6356d043951681 184 SUPERFAMILY SSF52540 3 182 1.42E-30 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_09155 af7ca2ca986c65258f6356d043951681 184 Gene3D G3DSA:3.40.50.300 2 182 1.6E-40 T 11-10-2018 YH65_09155 af7ca2ca986c65258f6356d043951681 184 PRINTS PR00094 Adenylate kinase signature 37 51 1.3E-14 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 YH65_09155 af7ca2ca986c65258f6356d043951681 184 PRINTS PR00094 Adenylate kinase signature 85 101 1.3E-14 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 YH65_09155 af7ca2ca986c65258f6356d043951681 184 PRINTS PR00094 Adenylate kinase signature 128 143 1.3E-14 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 YH65_09155 af7ca2ca986c65258f6356d043951681 184 PRINTS PR00094 Adenylate kinase signature 7 20 1.3E-14 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 YH65_09155 af7ca2ca986c65258f6356d043951681 184 Hamap MF_00235 Adenylate kinase [adk]. 4 181 24.677 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 YH65_09760 5a35e604837214162ac56c85a77bfdc0 343 Gene3D G3DSA:3.40.50.720 8 330 2.3E-106 T 11-10-2018 YH65_09760 5a35e604837214162ac56c85a77bfdc0 343 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 113 126 5.3E-15 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 YH65_09760 5a35e604837214162ac56c85a77bfdc0 343 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 175 191 5.3E-15 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 YH65_09760 5a35e604837214162ac56c85a77bfdc0 343 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 233 250 5.3E-15 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 YH65_09760 5a35e604837214162ac56c85a77bfdc0 343 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 148 166 5.3E-15 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 YH65_09760 5a35e604837214162ac56c85a77bfdc0 343 PIRSF PIRSF000149 5 338 1.8E-93 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 YH65_09760 5a35e604837214162ac56c85a77bfdc0 343 SUPERFAMILY SSF55347 154 318 8.93E-42 T 11-10-2018 YH65_09760 5a35e604837214162ac56c85a77bfdc0 343 Gene3D G3DSA:3.30.360.10 153 319 2.3E-106 T 11-10-2018 YH65_09760 5a35e604837214162ac56c85a77bfdc0 343 SUPERFAMILY SSF51735 7 170 6.25E-50 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily YH65_09760 5a35e604837214162ac56c85a77bfdc0 343 SMART SM00846 7 154 3.6E-62 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 YH65_09760 5a35e604837214162ac56c85a77bfdc0 343 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 159 316 6.9E-36 T 11-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 YH65_09760 5a35e604837214162ac56c85a77bfdc0 343 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 7 106 2.7E-30 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 YH65_01350 1a7653c091d757edfee4dee1fcb8f3d2 184 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 5 183 2.1E-49 T 11-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 YH65_01350 1a7653c091d757edfee4dee1fcb8f3d2 184 Pfam PF00551 Formyl transferase 5 180 1.8E-45 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YH65_01350 1a7653c091d757edfee4dee1fcb8f3d2 184 SUPERFAMILY SSF53328 5 183 7.98E-44 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YH65_01350 1a7653c091d757edfee4dee1fcb8f3d2 184 Gene3D G3DSA:3.40.50.170 2 184 1.1E-57 T 11-10-2018 YH65_02290 291fa4a15dfeada731a25110d0b59539 439 Pfam PF02397 Bacterial sugar transferase 241 433 1.1E-65 T 11-10-2018 IPR003362 Bacterial sugar transferase YH65_10075 5d50c10c8e135729d2b5a5e4fcddaf85 215 Gene3D G3DSA:3.40.50.1000 7 197 2.9E-47 T 11-10-2018 IPR023214 HAD superfamily YH65_10075 5d50c10c8e135729d2b5a5e4fcddaf85 215 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 184 6.0E-38 T 11-10-2018 YH65_10075 5d50c10c8e135729d2b5a5e4fcddaf85 215 Gene3D G3DSA:1.10.150.240 18 83 2.9E-47 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 YH65_10075 5d50c10c8e135729d2b5a5e4fcddaf85 215 SUPERFAMILY SSF56784 5 212 2.71E-47 T 11-10-2018 IPR036412 HAD-like superfamily YH65_10075 5d50c10c8e135729d2b5a5e4fcddaf85 215 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 6 177 1.5E-10 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 YH65_09925 e735e6bdf19e10a72b05f884096e7800 411 Gene3D G3DSA:3.40.640.10 67 298 3.3E-118 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 YH65_09925 e735e6bdf19e10a72b05f884096e7800 411 SUPERFAMILY SSF53383 7 402 1.11E-101 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase YH65_09925 e735e6bdf19e10a72b05f884096e7800 411 Pfam PF00155 Aminotransferase class I and II 34 395 8.8E-59 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YH65_09925 e735e6bdf19e10a72b05f884096e7800 411 Gene3D G3DSA:3.90.1150.10 299 397 3.3E-118 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 YH65_08610 480a43affbf5dc0f8d9c077a44b87706 251 Gene3D G3DSA:3.30.70.20 63 115 8.2E-61 T 11-10-2018 YH65_08610 480a43affbf5dc0f8d9c077a44b87706 251 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 89 100 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YH65_08610 480a43affbf5dc0f8d9c077a44b87706 251 Pfam PF12800 4Fe-4S binding domain 10 24 0.19 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YH65_08610 480a43affbf5dc0f8d9c077a44b87706 251 SUPERFAMILY SSF54862 1 200 5.55E-66 T 11-10-2018 YH65_08610 480a43affbf5dc0f8d9c077a44b87706 251 Pfam PF13247 4Fe-4S dicluster domain 51 144 3.1E-23 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YH65_08610 480a43affbf5dc0f8d9c077a44b87706 251 Gene3D G3DSA:3.30.70.20 4 179 8.2E-61 T 11-10-2018 YH65_07130 667c6c937d5b66eba91d680ba4aea235 252 Gene3D G3DSA:3.30.1950.10 51 134 8.1E-34 T 11-10-2018 YH65_07130 667c6c937d5b66eba91d680ba4aea235 252 Pfam PF10531 SLBB domain 135 179 3.7E-10 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_07130 667c6c937d5b66eba91d680ba4aea235 252 Pfam PF02563 Polysaccharide biosynthesis/export protein 47 131 3.7E-21 T 11-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 YH65_07130 667c6c937d5b66eba91d680ba4aea235 252 Gene3D G3DSA:3.10.560.10 33 218 8.1E-34 T 11-10-2018 YH65_07980 f855c0dfb168dda0d64a99e4f773e6fd 491 Pfam PF13145 PPIC-type PPIASE domain 239 359 1.6E-19 T 11-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 YH65_07980 f855c0dfb168dda0d64a99e4f773e6fd 491 Gene3D G3DSA:1.10.4030.30 43 165 1.8E-7 T 11-10-2018 YH65_07980 f855c0dfb168dda0d64a99e4f773e6fd 491 SUPERFAMILY SSF109998 42 297 6.28E-21 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily YH65_07980 f855c0dfb168dda0d64a99e4f773e6fd 491 Pfam PF13624 SurA N-terminal domain 1 163 4.8E-43 T 11-10-2018 YH65_06680 f8a2ec27096e7b74524b38d72b0418f0 634 SMART SM00089 45 130 7.2E-7 T 11-10-2018 IPR022409 PKD/Chitinase domain YH65_06680 f8a2ec27096e7b74524b38d72b0418f0 634 SMART SM00089 370 460 0.22 T 11-10-2018 IPR022409 PKD/Chitinase domain YH65_06680 f8a2ec27096e7b74524b38d72b0418f0 634 Gene3D G3DSA:2.60.40.10 362 458 5.1E-19 T 11-10-2018 IPR013783 Immunoglobulin-like fold YH65_06680 f8a2ec27096e7b74524b38d72b0418f0 634 SUPERFAMILY SSF49299 41 130 3.79E-13 T 11-10-2018 IPR035986 PKD domain superfamily YH65_06680 f8a2ec27096e7b74524b38d72b0418f0 634 Gene3D G3DSA:2.60.40.10 37 129 1.9E-20 T 11-10-2018 IPR013783 Immunoglobulin-like fold YH65_06680 f8a2ec27096e7b74524b38d72b0418f0 634 SUPERFAMILY SSF49299 366 458 7.26E-9 T 11-10-2018 IPR035986 PKD domain superfamily YH65_06680 f8a2ec27096e7b74524b38d72b0418f0 634 Pfam PF00801 PKD domain 58 119 5.0E-6 T 11-10-2018 IPR000601 PKD domain YH65_06555 bcf4af71bf0249048d828a33d7641436 1037 Pfam PF05140 ResB-like family 337 410 1.8E-12 T 11-10-2018 IPR007816 ResB-like domain YH65_06555 bcf4af71bf0249048d828a33d7641436 1037 Pfam PF01578 Cytochrome C assembly protein 791 995 2.2E-36 T 11-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 YH65_02010 1fe52fbc5748d254add04e5de34e3e46 257 Pfam PF01882 Protein of unknown function DUF58 13 92 3.4E-17 T 11-10-2018 IPR002881 Domain of unknown function DUF58 YH65_09630 2a49ff542069af6c565ce1f74805bc1e 360 Pfam PF12698 ABC-2 family transporter protein 37 351 1.4E-32 T 11-10-2018 YH65_00160 a377b61faea34c6f6963a9a8a8e937f5 503 Pfam PF00437 Type II/IV secretion system protein 131 395 6.0E-82 T 11-10-2018 IPR001482 Type II/IV secretion system protein YH65_00160 a377b61faea34c6f6963a9a8a8e937f5 503 SUPERFAMILY SSF52540 117 498 2.15E-90 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_00160 a377b61faea34c6f6963a9a8a8e937f5 503 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 323 337 - T 11-10-2018 IPR001482 Type II/IV secretion system protein YH65_00160 a377b61faea34c6f6963a9a8a8e937f5 503 Gene3D G3DSA:3.40.50.300 230 500 5.2E-102 T 11-10-2018 YH65_00160 a377b61faea34c6f6963a9a8a8e937f5 503 Gene3D G3DSA:3.30.450.90 90 228 2.5E-44 T 11-10-2018 YH65_00160 a377b61faea34c6f6963a9a8a8e937f5 503 SMART SM00382 256 391 3.8E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain YH65_00625 df4a42f089ba06a36adea96d7d1d1594 278 SUPERFAMILY SSF56349 7 270 7.06E-39 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 YH65_00625 df4a42f089ba06a36adea96d7d1d1594 278 Pfam PF00589 Phage integrase family 119 260 8.5E-32 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 YH65_00625 df4a42f089ba06a36adea96d7d1d1594 278 Gene3D G3DSA:1.10.150.130 7 96 1.6E-9 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal YH65_00625 df4a42f089ba06a36adea96d7d1d1594 278 Gene3D G3DSA:1.10.443.10 101 277 2.0E-44 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 YH65_00625 df4a42f089ba06a36adea96d7d1d1594 278 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 10 85 2.7E-7 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 YH65_01595 39094de5c6715399f89db924bf94b9a4 429 Gene3D G3DSA:3.10.450.350 118 371 3.7E-77 T 11-10-2018 YH65_01595 39094de5c6715399f89db924bf94b9a4 429 Gene3D G3DSA:2.70.70.10 228 358 3.7E-77 T 11-10-2018 IPR011055 Duplicated hybrid motif YH65_01595 39094de5c6715399f89db924bf94b9a4 429 Pfam PF01551 Peptidase family M23 257 351 1.8E-35 T 11-10-2018 IPR016047 Peptidase M23 YH65_01595 39094de5c6715399f89db924bf94b9a4 429 SUPERFAMILY SSF51261 93 355 2.56E-59 T 11-10-2018 IPR011055 Duplicated hybrid motif YH65_05950 9a8c4eacbe1c90602f087fe8bdfeaaf0 518 Pfam PF00999 Sodium/hydrogen exchanger family 7 392 3.9E-59 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 YH65_05950 9a8c4eacbe1c90602f087fe8bdfeaaf0 518 Gene3D G3DSA:1.20.1530.20 5 395 2.0E-9 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily YH65_07080 93c0b438a1f09951540a802d4c8dacd1 375 Pfam PF14907 Uncharacterised nucleotidyltransferase 23 277 9.3E-40 T 11-10-2018 IPR039498 Uncharacterised nucleotidyltransferase YH65_01860 0a978cd589ef8509d9c94ac67a6ca3e4 379 Gene3D G3DSA:3.40.50.300 103 356 5.7E-93 T 11-10-2018 YH65_01860 0a978cd589ef8509d9c94ac67a6ca3e4 379 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 5 346 8.1E-133 T 11-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 YH65_01860 0a978cd589ef8509d9c94ac67a6ca3e4 379 Pfam PF00437 Type II/IV secretion system protein 12 269 1.6E-47 T 11-10-2018 IPR001482 Type II/IV secretion system protein YH65_01860 0a978cd589ef8509d9c94ac67a6ca3e4 379 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 195 209 - T 11-10-2018 IPR001482 Type II/IV secretion system protein YH65_01860 0a978cd589ef8509d9c94ac67a6ca3e4 379 SMART SM00382 124 250 0.0011 T 11-10-2018 IPR003593 AAA+ ATPase domain YH65_01860 0a978cd589ef8509d9c94ac67a6ca3e4 379 SUPERFAMILY SSF52540 6 340 9.02E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_01860 0a978cd589ef8509d9c94ac67a6ca3e4 379 Gene3D G3DSA:3.30.450.90 1 101 5.6E-27 T 11-10-2018 YH65_09070 7d7890b8d0c1121c31b88fdb6ec129a1 325 Gene3D G3DSA:3.40.50.300 6 128 4.8E-8 T 11-10-2018 YH65_09070 7d7890b8d0c1121c31b88fdb6ec129a1 325 Gene3D G3DSA:1.10.8.60 140 219 7.0E-7 T 11-10-2018 YH65_09070 7d7890b8d0c1121c31b88fdb6ec129a1 325 SUPERFAMILY SSF52540 2 197 3.98E-13 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_09070 7d7890b8d0c1121c31b88fdb6ec129a1 325 Pfam PF06144 DNA polymerase III, delta subunit 19 181 3.3E-11 T 11-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 YH65_10715 a2d21551b14b68f587a5868938701fad 145 Pfam PF07681 DoxX 21 101 1.0E-17 T 11-10-2018 IPR032808 DoxX family YH65_05510 77650663c8c39b72667c0773da141b00 450 Gene3D G3DSA:1.20.1740.10 1 440 3.9E-94 T 11-10-2018 YH65_05510 77650663c8c39b72667c0773da141b00 450 PIRSF PIRSF006060 1 437 4.9E-58 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 YH65_05510 77650663c8c39b72667c0773da141b00 450 Pfam PF13520 Amino acid permease 8 415 4.2E-32 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 YH65_02600 ea21934da1d48c1aa98c0450b95df77a 677 Gene3D G3DSA:1.10.3430.10 2 317 7.9E-61 T 11-10-2018 IPR029020 Ammonium/urea transporter YH65_02600 ea21934da1d48c1aa98c0450b95df77a 677 SUPERFAMILY SSF51261 346 473 2.14E-12 T 11-10-2018 IPR011055 Duplicated hybrid motif YH65_02600 ea21934da1d48c1aa98c0450b95df77a 677 Gene3D G3DSA:2.70.70.10 328 495 5.3E-23 T 11-10-2018 IPR011055 Duplicated hybrid motif YH65_02600 ea21934da1d48c1aa98c0450b95df77a 677 Pfam PF01551 Peptidase family M23 379 471 1.0E-10 T 11-10-2018 IPR016047 Peptidase M23 YH65_02600 ea21934da1d48c1aa98c0450b95df77a 677 Pfam PF03253 Urea transporter 11 290 1.4E-59 T 11-10-2018 IPR004937 Urea transporter GO:0015204|GO:0016021|GO:0071918 Reactome: R-HSA-425366 YH65_01570 24f9178d8e75dc53bbeec3e5ee6e88fa 478 Pfam PF00772 DnaB-like helicase N terminal domain 4 98 4.1E-21 T 11-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 YH65_01570 24f9178d8e75dc53bbeec3e5ee6e88fa 478 Gene3D G3DSA:1.10.860.10 1 117 2.4E-27 T 11-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal YH65_01570 24f9178d8e75dc53bbeec3e5ee6e88fa 478 Pfam PF03796 DnaB-like helicase C terminal domain 174 447 3.9E-102 T 11-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 YH65_01570 24f9178d8e75dc53bbeec3e5ee6e88fa 478 SUPERFAMILY SSF52540 175 441 3.16E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_01570 24f9178d8e75dc53bbeec3e5ee6e88fa 478 Gene3D G3DSA:3.40.50.300 147 449 1.9E-103 T 11-10-2018 YH65_01570 24f9178d8e75dc53bbeec3e5ee6e88fa 478 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 4 450 9.8E-143 T 11-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 YH65_01570 24f9178d8e75dc53bbeec3e5ee6e88fa 478 SUPERFAMILY SSF48024 4 106 3.53E-20 T 11-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 YH65_01140 3e7ea0e99a7c9a6a9ec885728e528017 95 SUPERFAMILY SSF54909 1 87 1.92E-24 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel YH65_01140 3e7ea0e99a7c9a6a9ec885728e528017 95 Gene3D G3DSA:3.30.70.100 1 94 5.6E-25 T 11-10-2018 YH65_01140 3e7ea0e99a7c9a6a9ec885728e528017 95 Pfam PF03992 Antibiotic biosynthesis monooxygenase 5 75 5.4E-15 T 11-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain YH65_09080 367fc16c84a598d84009ffe0c78b8ca4 165 PIRSF PIRSF002070 1 160 4.9E-33 T 11-10-2018 YH65_09080 367fc16c84a598d84009ffe0c78b8ca4 165 Pfam PF00436 Single-strand binding protein family 3 105 1.1E-31 T 11-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 YH65_09080 367fc16c84a598d84009ffe0c78b8ca4 165 SUPERFAMILY SSF50249 1 165 1.58E-50 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold YH65_09080 367fc16c84a598d84009ffe0c78b8ca4 165 Gene3D G3DSA:2.40.50.140 1 122 2.0E-39 T 11-10-2018 YH65_09080 367fc16c84a598d84009ffe0c78b8ca4 165 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 165 9.8E-50 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 YH65_09080 367fc16c84a598d84009ffe0c78b8ca4 165 Hamap MF_00984 Single-stranded DNA-binding protein. 2 109 31.729 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 YH65_06315 8d0be528f209db0ab420b14e7071fecf 381 Pfam PF12704 MacB-like periplasmic core domain 18 236 2.9E-12 T 11-10-2018 IPR025857 MacB-like periplasmic core domain YH65_10030 17c59cb3197e9c42f5bedd661f5f2a6f 205 Gene3D G3DSA:2.40.30.20 1 78 3.8E-15 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 YH65_10030 17c59cb3197e9c42f5bedd661f5f2a6f 205 Gene3D G3DSA:2.40.30.20 92 194 1.1E-32 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 YH65_10030 17c59cb3197e9c42f5bedd661f5f2a6f 205 PIRSF PIRSF000498 1 199 8.9E-67 T 11-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 YH65_10030 17c59cb3197e9c42f5bedd661f5f2a6f 205 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 188 6.6E-64 T 11-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 YH65_10030 17c59cb3197e9c42f5bedd661f5f2a6f 205 SUPERFAMILY SSF63380 1 83 3.57E-15 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel YH65_10030 17c59cb3197e9c42f5bedd661f5f2a6f 205 SUPERFAMILY SSF63380 84 187 1.45E-32 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel YH65_10030 17c59cb3197e9c42f5bedd661f5f2a6f 205 Pfam PF00677 Lumazine binding domain 90 174 1.4E-24 T 11-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 YH65_10030 17c59cb3197e9c42f5bedd661f5f2a6f 205 Pfam PF00677 Lumazine binding domain 3 64 1.2E-12 T 11-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 YH65_06190 b5e15a37d3184ea2676c2297252f0d08 242 SUPERFAMILY SSF117396 5 240 1.7E-83 T 11-10-2018 IPR036520 UPF0759 superfamily YH65_06190 b5e15a37d3184ea2676c2297252f0d08 242 Pfam PF01904 Protein of unknown function DUF72 22 237 1.4E-67 T 11-10-2018 IPR002763 Protein of unknown function DUF72 YH65_06190 b5e15a37d3184ea2676c2297252f0d08 242 Gene3D G3DSA:3.20.20.410 1 242 6.8E-83 T 11-10-2018 IPR036520 UPF0759 superfamily YH65_03195 d10a0242514b220fb645930962c991c5 290 Gene3D G3DSA:3.90.1530.30 52 114 8.8E-25 T 11-10-2018 YH65_03195 d10a0242514b220fb645930962c991c5 290 Pfam PF02195 ParB-like nuclease domain 40 130 6.4E-22 T 11-10-2018 IPR003115 ParB/Sulfiredoxin YH65_03195 d10a0242514b220fb645930962c991c5 290 SMART SM00470 39 130 2.4E-29 T 11-10-2018 IPR003115 ParB/Sulfiredoxin YH65_03195 d10a0242514b220fb645930962c991c5 290 SUPERFAMILY SSF110849 31 134 4.97E-25 T 11-10-2018 IPR036086 ParB/Sulfiredoxin superfamily YH65_03195 d10a0242514b220fb645930962c991c5 290 Gene3D G3DSA:1.10.10.2830 117 230 9.3E-31 T 11-10-2018 YH65_03195 d10a0242514b220fb645930962c991c5 290 SUPERFAMILY SSF109709 123 232 3.4E-30 T 11-10-2018 YH65_03195 d10a0242514b220fb645930962c991c5 290 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 36 210 2.4E-49 T 11-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 YH65_07510 53556f6695907231331b471ea5995c2d 154 Pfam PF03724 META domain 29 90 1.6E-4 T 11-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ YH65_04635 725f36648a099ae2bd27c4c68dfea368 272 SUPERFAMILY SSF56784 4 270 2.94E-46 T 11-10-2018 IPR036412 HAD-like superfamily YH65_04635 725f36648a099ae2bd27c4c68dfea368 272 Gene3D G3DSA:3.40.50.1000 5 269 9.3E-46 T 11-10-2018 IPR023214 HAD superfamily YH65_04635 725f36648a099ae2bd27c4c68dfea368 272 Gene3D G3DSA:3.30.1240.10 81 197 9.3E-46 T 11-10-2018 YH65_04635 725f36648a099ae2bd27c4c68dfea368 272 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 269 1.5E-41 T 11-10-2018 YH65_06825 3ec6ea0e425385ffc5d4a9d632640aa9 175 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 37 172 7.4E-49 T 11-10-2018 IPR005247 YbhB/YbcL YH65_06825 3ec6ea0e425385ffc5d4a9d632640aa9 175 Pfam PF01161 Phosphatidylethanolamine-binding protein 37 173 1.4E-40 T 11-10-2018 IPR008914 Phosphatidylethanolamine-binding protein YH65_06825 3ec6ea0e425385ffc5d4a9d632640aa9 175 SUPERFAMILY SSF49777 21 174 1.83E-52 T 11-10-2018 IPR036610 PEBP-like superfamily YH65_06825 3ec6ea0e425385ffc5d4a9d632640aa9 175 Gene3D G3DSA:3.90.280.10 15 175 1.7E-58 T 11-10-2018 IPR036610 PEBP-like superfamily YH65_08585 a168d97929f43c95f35d3c390f00882d 158 SUPERFAMILY SSF53223 8 107 5.35E-5 T 11-10-2018 YH65_08585 a168d97929f43c95f35d3c390f00882d 158 Gene3D G3DSA:3.40.50.10860 3 149 3.6E-8 T 11-10-2018 YH65_01835 4f1c2616b4d6f0e71dbec677dcdb7c46 210 Gene3D G3DSA:3.40.50.300 2 202 2.6E-61 T 11-10-2018 YH65_01835 4f1c2616b4d6f0e71dbec677dcdb7c46 210 SUPERFAMILY SSF52540 3 172 1.92E-37 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_01835 4f1c2616b4d6f0e71dbec677dcdb7c46 210 PIRSF PIRSF006755 1 189 3.6E-41 T 11-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 YH65_01835 4f1c2616b4d6f0e71dbec677dcdb7c46 210 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 5 166 4.8E-39 T 11-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 YH65_01835 4f1c2616b4d6f0e71dbec677dcdb7c46 210 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 1 194 23.322 T 11-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 YH65_01835 4f1c2616b4d6f0e71dbec677dcdb7c46 210 Pfam PF13500 AAA domain 3 166 2.8E-33 T 11-10-2018 YH65_09100 62ba82c16206748ce5e282a260ead708 206 Gene3D G3DSA:3.30.420.40 60 206 1.2E-40 T 11-10-2018 YH65_09100 62ba82c16206748ce5e282a260ead708 206 Pfam PF03309 Type III pantothenate kinase 61 162 7.7E-15 T 11-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 YH65_09100 62ba82c16206748ce5e282a260ead708 206 SUPERFAMILY SSF53067 84 202 1.08E-25 T 11-10-2018 YH65_09100 62ba82c16206748ce5e282a260ead708 206 Gene3D G3DSA:3.30.420.40 1 58 3.3E-5 T 11-10-2018 YH65_09100 62ba82c16206748ce5e282a260ead708 206 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 26 201 3.4E-18 T 11-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 YH65_09100 62ba82c16206748ce5e282a260ead708 206 SUPERFAMILY SSF53067 1 81 1.11E-23 T 11-10-2018 YH65_00665 b7309d7aa5bafb7c692be11f288433ce 494 SUPERFAMILY SSF53649 5 489 3.27E-64 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 YH65_00665 b7309d7aa5bafb7c692be11f288433ce 494 SUPERFAMILY SSF64158 77 295 6.8E-76 T 11-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YH65_00665 b7309d7aa5bafb7c692be11f288433ce 494 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 4 490 1.4E-199 T 11-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YH65_00665 b7309d7aa5bafb7c692be11f288433ce 494 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 82 285 2.6E-70 T 11-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YH65_00665 b7309d7aa5bafb7c692be11f288433ce 494 PIRSF PIRSF001492 1 494 2.5E-188 T 11-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YH65_00665 b7309d7aa5bafb7c692be11f288433ce 494 Pfam PF01676 Metalloenzyme superfamily 5 483 4.3E-70 T 11-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 YH65_00665 b7309d7aa5bafb7c692be11f288433ce 494 Gene3D G3DSA:3.40.720.10 6 490 2.1E-192 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 YH65_00665 b7309d7aa5bafb7c692be11f288433ce 494 Gene3D G3DSA:3.40.1450.10 77 297 2.1E-192 T 11-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YH65_00665 b7309d7aa5bafb7c692be11f288433ce 494 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 4 494 43.74 T 11-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YH65_03270 f898153c8746e480c0068569b4737a2a 282 Pfam PF13174 Tetratricopeptide repeat 239 267 0.0011 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 YH65_03270 f898153c8746e480c0068569b4737a2a 282 SUPERFAMILY SSF48452 167 278 6.07E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YH65_03270 f898153c8746e480c0068569b4737a2a 282 Gene3D G3DSA:1.25.40.10 165 282 9.0E-17 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YH65_09650 f949657e60287989e5fe97cef3d39065 385 Gene3D G3DSA:1.10.287.470 120 218 1.3E-5 T 11-10-2018 YH65_09650 f949657e60287989e5fe97cef3d39065 385 Pfam PF13533 Biotin-lipoyl like 52 95 8.7E-9 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain YH65_09650 f949657e60287989e5fe97cef3d39065 385 Pfam PF13437 HlyD family secretion protein 249 334 6.0E-15 T 11-10-2018 YH65_09650 f949657e60287989e5fe97cef3d39065 385 Gene3D G3DSA:2.40.30.170 279 330 1.5E-11 T 11-10-2018 YH65_09650 f949657e60287989e5fe97cef3d39065 385 Gene3D G3DSA:2.40.50.100 49 116 2.0E-8 T 11-10-2018 YH65_09650 f949657e60287989e5fe97cef3d39065 385 Gene3D G3DSA:2.40.50.100 247 278 1.5E-11 T 11-10-2018 YH65_06885 cb48db794d0bf875cc2bf8de71053628 114 Gene3D G3DSA:1.20.120.910 1 113 9.3E-21 T 11-10-2018 YH65_06885 cb48db794d0bf875cc2bf8de71053628 114 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 79 108 2.5E-9 T 11-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 YH65_06885 cb48db794d0bf875cc2bf8de71053628 114 SUPERFAMILY SSF109635 1 78 4.45E-5 T 11-10-2018 IPR037187 DksA, N-terminal domain superfamily YH65_06885 cb48db794d0bf875cc2bf8de71053628 114 SUPERFAMILY SSF57716 81 111 7.77E-8 T 11-10-2018 YH65_04450 5c9243c6f9aef39b3b68afc2669cba32 208 Pfam PF14681 Uracil phosphoribosyltransferase 6 206 4.0E-59 T 11-10-2018 YH65_04450 5c9243c6f9aef39b3b68afc2669cba32 208 SUPERFAMILY SSF53271 2 205 6.16E-58 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like YH65_04450 5c9243c6f9aef39b3b68afc2669cba32 208 Gene3D G3DSA:3.40.50.2020 1 207 1.4E-68 T 11-10-2018 YH65_04450 5c9243c6f9aef39b3b68afc2669cba32 208 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 1 206 6.9E-73 T 11-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 YH65_07270 0129586e59e73f28ab6ee37f16ade73a 135 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 5 110 9.3E-28 T 11-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 YH65_07270 0129586e59e73f28ab6ee37f16ade73a 135 SUPERFAMILY SSF52540 14 103 4.53E-13 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_07270 0129586e59e73f28ab6ee37f16ade73a 135 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 5 110 4.3E-26 T 11-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 YH65_07270 0129586e59e73f28ab6ee37f16ade73a 135 Gene3D G3DSA:3.40.50.300 1 135 1.5E-28 T 11-10-2018 YH65_10190 3ed424d2d85c63bc09cff5404db94950 281 Gene3D G3DSA:3.30.930.10 3 280 2.2E-25 T 11-10-2018 YH65_10190 3ed424d2d85c63bc09cff5404db94950 281 Pfam PF13393 Histidyl-tRNA synthetase 18 271 2.4E-14 T 11-10-2018 YH65_10190 3ed424d2d85c63bc09cff5404db94950 281 SUPERFAMILY SSF55681 5 257 9.09E-26 T 11-10-2018 YH65_06415 1eeaf8d62064eb7c61dc0389cba17b33 450 SUPERFAMILY SSF54862 117 229 1.12E-8 T 11-10-2018 YH65_10135 22ab15339e1907cabbe5b932b9bdb9f9 182 Pfam PF13115 YtkA-like 95 163 6.2E-8 T 11-10-2018 IPR032693 YtkA-like domain YH65_07415 01699fe3614646692ecca4c23018a706 244 Gene3D G3DSA:3.30.540.10 2 132 1.7E-18 T 11-10-2018 YH65_07415 01699fe3614646692ecca4c23018a706 244 SUPERFAMILY SSF56655 2 213 1.7E-23 T 11-10-2018 YH65_07415 01699fe3614646692ecca4c23018a706 244 PRINTS PR00377 Inositol monophosphatase superfamily signature 168 189 9.5E-5 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 YH65_07415 01699fe3614646692ecca4c23018a706 244 PRINTS PR00377 Inositol monophosphatase superfamily signature 76 92 9.5E-5 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 YH65_07415 01699fe3614646692ecca4c23018a706 244 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 9.5E-5 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 YH65_07415 01699fe3614646692ecca4c23018a706 244 Pfam PF00459 Inositol monophosphatase family 34 211 3.7E-9 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 YH65_01080 95cba0e675bd687a8ebf382ceee2b7ef 73 SUPERFAMILY SSF54285 1 73 1.74E-12 T 11-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp YH65_01080 95cba0e675bd687a8ebf382ceee2b7ef 73 Gene3D G3DSA:3.10.20.30 1 73 2.3E-21 T 11-10-2018 IPR012675 Beta-grasp domain superfamily YH65_01080 95cba0e675bd687a8ebf382ceee2b7ef 73 Pfam PF02597 ThiS family 8 73 2.2E-15 T 11-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 YH65_09795 81a92eca363a90b6727c8643b9f3ff29 373 Gene3D G3DSA:1.10.1130.10 18 230 3.3E-9 T 11-10-2018 YH65_09795 81a92eca363a90b6727c8643b9f3ff29 373 SUPERFAMILY SSF48695 20 222 9.83E-21 T 11-10-2018 IPR036280 Multiheme cytochrome superfamily YH65_09795 81a92eca363a90b6727c8643b9f3ff29 373 Pfam PF13435 Cytochrome c554 and c-prime 29 109 4.9E-7 T 11-10-2018 IPR023155 Cytochrome c-552/4 YH65_07445 cd05ad8e6fdb62ef7857019ac69d9111 328 Gene3D G3DSA:3.40.50.300 18 186 3.4E-43 T 11-10-2018 YH65_07445 cd05ad8e6fdb62ef7857019ac69d9111 328 SUPERFAMILY SSF52540 9 292 4.24E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_07445 cd05ad8e6fdb62ef7857019ac69d9111 328 Gene3D G3DSA:1.10.8.300 202 317 9.5E-30 T 11-10-2018 YH65_07445 cd05ad8e6fdb62ef7857019ac69d9111 328 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 38 169 8.4E-59 T 11-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 YH65_07445 cd05ad8e6fdb62ef7857019ac69d9111 328 PIRSF PIRSF002849 1 322 1.8E-114 T 11-10-2018 YH65_10620 1595e076171d3fc23cc0c20beaad0f45 181 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 178 36.875 T 11-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 YH65_10620 1595e076171d3fc23cc0c20beaad0f45 181 SUPERFAMILY SSF55282 6 177 1.91E-63 T 11-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_10620 1595e076171d3fc23cc0c20beaad0f45 181 Pfam PF00673 ribosomal L5P family C-terminus 83 176 3.9E-36 T 11-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_10620 1595e076171d3fc23cc0c20beaad0f45 181 Gene3D G3DSA:3.30.1440.10 1 178 9.0E-67 T 11-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_10620 1595e076171d3fc23cc0c20beaad0f45 181 Pfam PF00281 Ribosomal protein L5 23 79 8.2E-20 T 11-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_10620 1595e076171d3fc23cc0c20beaad0f45 181 PIRSF PIRSF002161 1 181 3.6E-56 T 11-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_03365 f4fdb89ba9e177b2147e7c8b2c47c196 68 SMART SM01409 9 64 1.1E-11 T 11-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 YH65_03365 f4fdb89ba9e177b2147e7c8b2c47c196 68 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 3 65 11.019 T 11-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YH65_03365 f4fdb89ba9e177b2147e7c8b2c47c196 68 SUPERFAMILY SSF63562 9 65 5.36E-14 T 11-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 YH65_03365 f4fdb89ba9e177b2147e7c8b2c47c196 68 Pfam PF01192 RNA polymerase Rpb6 17 63 2.0E-11 T 11-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 YH65_03365 f4fdb89ba9e177b2147e7c8b2c47c196 68 Gene3D G3DSA:3.90.940.10 5 68 2.2E-12 T 11-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 YH65_03365 f4fdb89ba9e177b2147e7c8b2c47c196 68 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 10 62 2.5E-6 T 11-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YH65_07730 2545d154f5e1c2899324830c2f620163 152 Gene3D G3DSA:3.40.250.10 22 142 3.4E-29 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily YH65_07730 2545d154f5e1c2899324830c2f620163 152 SUPERFAMILY SSF52821 28 144 1.7E-26 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily YH65_07730 2545d154f5e1c2899324830c2f620163 152 Pfam PF00581 Rhodanese-like domain 40 135 2.2E-12 T 11-10-2018 IPR001763 Rhodanese-like domain YH65_07730 2545d154f5e1c2899324830c2f620163 152 SMART SM00450 40 139 1.7E-13 T 11-10-2018 IPR001763 Rhodanese-like domain YH65_03420 29e9afff412477a3c290908a1aef1411 625 Gene3D G3DSA:2.40.170.20 162 420 7.3E-6 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily YH65_03420 29e9afff412477a3c290908a1aef1411 625 SUPERFAMILY SSF56935 48 623 3.48E-24 T 11-10-2018 YH65_03015 3f42c7cda9d54cd6af04c155497ca02b 280 PIRSF PIRSF028756 6 280 2.7E-108 T 11-10-2018 IPR016898 Polyphosphate kinase 2 KEGG: 00190+2.7.4.1 YH65_03015 3f42c7cda9d54cd6af04c155497ca02b 280 Gene3D G3DSA:3.40.50.300 7 277 9.3E-94 T 11-10-2018 YH65_03015 3f42c7cda9d54cd6af04c155497ca02b 280 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 34 256 8.3E-97 T 11-10-2018 IPR022488 Polyphosphate kinase-2-related YH65_03015 3f42c7cda9d54cd6af04c155497ca02b 280 SUPERFAMILY SSF52540 62 250 2.28E-26 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_03015 3f42c7cda9d54cd6af04c155497ca02b 280 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 33 257 7.9E-106 T 11-10-2018 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 KEGG: 00190+2.7.4.1 YH65_01535 6a43a36657cf4c109d6531e53ed31aa9 310 Gene3D G3DSA:3.30.70.270 165 298 5.9E-20 T 11-10-2018 YH65_01535 6a43a36657cf4c109d6531e53ed31aa9 310 SUPERFAMILY SSF55073 177 284 1.33E-13 T 11-10-2018 IPR029787 Nucleotide cyclase YH65_01535 6a43a36657cf4c109d6531e53ed31aa9 310 SMART SM00267 160 307 4.3E-4 T 11-10-2018 IPR000160 GGDEF domain YH65_01535 6a43a36657cf4c109d6531e53ed31aa9 310 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 168 283 1.7E-15 T 11-10-2018 IPR000160 GGDEF domain YH65_01535 6a43a36657cf4c109d6531e53ed31aa9 310 Pfam PF00990 Diguanylate cyclase, GGDEF domain 171 287 2.5E-15 T 11-10-2018 IPR000160 GGDEF domain YH65_07500 737bc1e85f7fd992183cfea40c9b7c05 425 PIRSF PIRSF006066 1 425 3.4E-67 T 11-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 YH65_07500 737bc1e85f7fd992183cfea40c9b7c05 425 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 12 422 3.8E-99 T 11-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 YH65_07500 737bc1e85f7fd992183cfea40c9b7c05 425 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 2 418 2.3E-89 T 11-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit YH65_03030 f7a6b3004dc6dbdff3699e56dc3507b4 215 SUPERFAMILY SSF109998 63 185 7.65E-5 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily YH65_06375 871f2418a440f5fab2940335e7d0dee3 120 SUPERFAMILY SSF52821 11 105 2.74E-18 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily YH65_06375 871f2418a440f5fab2940335e7d0dee3 120 Pfam PF00581 Rhodanese-like domain 22 103 2.8E-5 T 11-10-2018 IPR001763 Rhodanese-like domain YH65_06375 871f2418a440f5fab2940335e7d0dee3 120 Gene3D G3DSA:3.40.250.10 16 107 1.2E-13 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily YH65_11115 cacfe60469501a0348d504f3ca2841d2 156 Pfam PF01152 Bacterial-like globin 35 137 2.5E-19 T 11-10-2018 IPR001486 Truncated hemoglobin GO:0019825 YH65_11115 cacfe60469501a0348d504f3ca2841d2 156 Gene3D G3DSA:1.10.490.10 25 156 1.5E-32 T 11-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 YH65_11115 cacfe60469501a0348d504f3ca2841d2 156 SUPERFAMILY SSF46458 35 152 4.8E-17 T 11-10-2018 IPR009050 Globin-like superfamily YH65_04860 9ea60f6a84f002384256a215a3b2e1a4 182 TIGRFAM TIGR03127 RuMP_HxlB: 6-phospho 3-hexuloisomerase 6 182 1.4E-57 T 11-10-2018 IPR017552 3-hexulose-6-phosphate isomerase GO:0016853 YH65_04860 9ea60f6a84f002384256a215a3b2e1a4 182 SUPERFAMILY SSF53697 5 180 5.15E-35 T 11-10-2018 YH65_04860 9ea60f6a84f002384256a215a3b2e1a4 182 Gene3D G3DSA:3.40.50.10490 2 182 2.3E-49 T 11-10-2018 YH65_04860 9ea60f6a84f002384256a215a3b2e1a4 182 Pfam PF01380 SIS domain 31 130 3.2E-16 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 YH65_07190 edf7e06c73c0ba117d90a9cdc09f17cb 290 Pfam PF14804 Jag N-terminus 4 52 8.9E-16 T 11-10-2018 IPR032782 Jag, N-terminal YH65_07190 edf7e06c73c0ba117d90a9cdc09f17cb 290 Gene3D G3DSA:3.30.30.80 2 54 6.4E-14 T 11-10-2018 IPR038247 Jag, N-terminal domain superfamily YH65_07190 edf7e06c73c0ba117d90a9cdc09f17cb 290 SMART SM01245 3 54 1.9E-20 T 11-10-2018 IPR032782 Jag, N-terminal YH65_07190 edf7e06c73c0ba117d90a9cdc09f17cb 290 Gene3D G3DSA:3.30.300.20 138 216 1.3E-30 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta YH65_07190 edf7e06c73c0ba117d90a9cdc09f17cb 290 Gene3D G3DSA:3.30.1370.180 217 288 9.0E-33 T 11-10-2018 YH65_05745 34536dd00b941ad9b6d0e6c7c260d3e1 153 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 51 88 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 YH65_05745 34536dd00b941ad9b6d0e6c7c260d3e1 153 SUPERFAMILY SSF53927 3 151 1.43E-45 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 YH65_05745 34536dd00b941ad9b6d0e6c7c260d3e1 153 Gene3D G3DSA:3.40.140.10 2 153 2.2E-55 T 11-10-2018 YH65_05745 34536dd00b941ad9b6d0e6c7c260d3e1 153 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 4 99 1.8E-26 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain YH65_01940 ad20a8d39aa9da11d4c5d51b4adf010c 271 Gene3D G3DSA:3.60.21.10 1 270 1.1E-92 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like YH65_01940 ad20a8d39aa9da11d4c5d51b4adf010c 271 PIRSF PIRSF004789 1 262 5.7E-86 T 11-10-2018 IPR005235 Metallophosphoesterase, YmdB-like YH65_01940 ad20a8d39aa9da11d4c5d51b4adf010c 271 Pfam PF13277 YmdB-like protein 5 253 3.3E-88 T 11-10-2018 IPR005235 Metallophosphoesterase, YmdB-like YH65_01940 ad20a8d39aa9da11d4c5d51b4adf010c 271 SUPERFAMILY SSF56300 1 253 7.97E-67 T 11-10-2018 YH65_05560 29cebd6dfe734a1f8d11b989d1f15ac0 305 SUPERFAMILY SSF64182 3 304 7.33E-72 T 11-10-2018 IPR038763 DHH phosphoesterase superfamily YH65_05560 29cebd6dfe734a1f8d11b989d1f15ac0 305 Pfam PF02833 DHHA2 domain 180 303 2.3E-21 T 11-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 YH65_05560 29cebd6dfe734a1f8d11b989d1f15ac0 305 Gene3D G3DSA:3.10.310.20 190 305 7.6E-38 T 11-10-2018 IPR038222 DHHA2 domain superfamily KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 YH65_05560 29cebd6dfe734a1f8d11b989d1f15ac0 305 Pfam PF01368 DHH family 3 143 8.4E-19 T 11-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 YH65_05560 29cebd6dfe734a1f8d11b989d1f15ac0 305 Gene3D G3DSA:3.90.1640.10 2 186 1.2E-66 T 11-10-2018 YH65_05560 29cebd6dfe734a1f8d11b989d1f15ac0 305 SMART SM01131 179 305 1.2E-57 T 11-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 YH65_07230 a1c2c0a27ed545f36283da97397b3943 295 PIRSF PIRSF000114 30 295 9.6E-73 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 YH65_07230 a1c2c0a27ed545f36283da97397b3943 295 PIRSF PIRSF000114 1 41 0.0022 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 YH65_07230 a1c2c0a27ed545f36283da97397b3943 295 Gene3D G3DSA:1.10.1040.10 159 295 1.8E-47 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 YH65_07230 a1c2c0a27ed545f36283da97397b3943 295 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 150 290 5.9E-49 T 11-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 YH65_07230 a1c2c0a27ed545f36283da97397b3943 295 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 158 179 - T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 YH65_07230 a1c2c0a27ed545f36283da97397b3943 295 SUPERFAMILY SSF48179 149 294 3.06E-50 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 YH65_07230 a1c2c0a27ed545f36283da97397b3943 295 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 1 292 31.166 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 YH65_07230 a1c2c0a27ed545f36283da97397b3943 295 SUPERFAMILY SSF51735 1 142 1.54E-24 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily YH65_07230 a1c2c0a27ed545f36283da97397b3943 295 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 21 130 8.4E-19 T 11-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 YH65_07230 a1c2c0a27ed545f36283da97397b3943 295 Gene3D G3DSA:3.40.50.720 21 157 1.9E-25 T 11-10-2018 YH65_02000 0be8da774f3d7ad3bb8ee99a51cd5299 221 SUPERFAMILY SSF56925 41 221 1.05E-19 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel YH65_02000 0be8da774f3d7ad3bb8ee99a51cd5299 221 Gene3D G3DSA:2.40.160.20 41 221 3.7E-21 T 11-10-2018 YH65_02000 0be8da774f3d7ad3bb8ee99a51cd5299 221 Pfam PF13505 Outer membrane protein beta-barrel domain 43 221 1.2E-18 T 11-10-2018 IPR027385 Outer membrane protein beta-barrel YH65_05785 743464b9129ebf5bcef81a1c8b34b932 156 Pfam PF10116 Protein required for attachment to host cells 6 153 1.3E-13 T 11-10-2018 IPR019291 Host attachment protein YH65_04685 2938cf12a62e4f5d6702dd2495395d7e 152 Pfam PF08282 haloacid dehalogenase-like hydrolase 65 130 1.6E-12 T 11-10-2018 YH65_04685 2938cf12a62e4f5d6702dd2495395d7e 152 Gene3D G3DSA:3.40.50.1000 1 148 9.9E-46 T 11-10-2018 IPR023214 HAD superfamily YH65_04685 2938cf12a62e4f5d6702dd2495395d7e 152 PIRSF PIRSF006118 1 152 7.9E-53 T 11-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 YH65_04685 2938cf12a62e4f5d6702dd2495395d7e 152 SUPERFAMILY SSF56784 1 139 1.44E-31 T 11-10-2018 IPR036412 HAD-like superfamily YH65_04685 2938cf12a62e4f5d6702dd2495395d7e 152 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 1 141 1.6E-46 T 11-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 YH65_02385 2b4a546dbcf0532852c6463af5b43b05 467 Gene3D G3DSA:2.60.120.10 342 452 2.3E-17 T 11-10-2018 IPR014710 RmlC-like jelly roll fold YH65_02385 2b4a546dbcf0532852c6463af5b43b05 467 Pfam PF01050 Mannose-6-phosphate isomerase 311 460 3.6E-64 T 11-10-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 YH65_02385 2b4a546dbcf0532852c6463af5b43b05 467 Gene3D G3DSA:3.90.550.10 1 341 1.4E-111 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YH65_02385 2b4a546dbcf0532852c6463af5b43b05 467 SUPERFAMILY SSF51182 179 462 1.39E-71 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily YH65_02385 2b4a546dbcf0532852c6463af5b43b05 467 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 2 463 5.8E-166 T 11-10-2018 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 YH65_02385 2b4a546dbcf0532852c6463af5b43b05 467 SUPERFAMILY SSF53448 1 273 1.81E-65 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YH65_02385 2b4a546dbcf0532852c6463af5b43b05 467 Pfam PF00483 Nucleotidyl transferase 3 278 2.7E-61 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 YH65_04355 036500edd3a79bd702d5cb1d929c1a73 345 Gene3D G3DSA:3.30.160.60 289 327 1.2E-5 T 11-10-2018 YH65_04355 036500edd3a79bd702d5cb1d929c1a73 345 Pfam PF02618 YceG-like family 45 315 2.8E-52 T 11-10-2018 IPR003770 Endolytic murein transglycosylase YH65_04355 036500edd3a79bd702d5cb1d929c1a73 345 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 44 317 2.1E-31 T 11-10-2018 IPR003770 Endolytic murein transglycosylase YH65_04355 036500edd3a79bd702d5cb1d929c1a73 345 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 16 322 24.456 T 11-10-2018 IPR003770 Endolytic murein transglycosylase YH65_05145 309538db117b969bbfb5419c4f0d30db 212 SUPERFAMILY SSF53335 39 199 2.31E-19 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YH65_05145 309538db117b969bbfb5419c4f0d30db 212 Pfam PF13489 Methyltransferase domain 62 199 7.7E-20 T 11-10-2018 YH65_05145 309538db117b969bbfb5419c4f0d30db 212 Gene3D G3DSA:3.40.50.150 39 207 5.9E-15 T 11-10-2018 YH65_07735 bb971443e286a1ae4343fd8ecf79caec 117 SUPERFAMILY SSF75169 1 117 1.24E-22 T 11-10-2018 IPR027396 DsrEFH-like YH65_07735 bb971443e286a1ae4343fd8ecf79caec 117 Pfam PF02635 DsrE/DsrF-like family 3 117 4.2E-16 T 11-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein YH65_07735 bb971443e286a1ae4343fd8ecf79caec 117 Gene3D G3DSA:3.40.1260.10 1 117 7.4E-24 T 11-10-2018 IPR027396 DsrEFH-like YH65_02845 720bf12b2b466de2178b5e9bec1d8b21 118 Gene3D G3DSA:1.10.760.10 21 96 3.8E-14 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_02845 720bf12b2b466de2178b5e9bec1d8b21 118 Pfam PF00034 Cytochrome c 21 97 3.8E-6 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YH65_02845 720bf12b2b466de2178b5e9bec1d8b21 118 SUPERFAMILY SSF46626 26 97 6.5E-14 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_09610 5a70043b196442dee7bbab89e0ffe8aa 376 Gene3D G3DSA:3.20.20.70 22 374 2.1E-46 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YH65_09610 5a70043b196442dee7bbab89e0ffe8aa 376 SUPERFAMILY SSF102114 23 346 2.09E-67 T 11-10-2018 YH65_09610 5a70043b196442dee7bbab89e0ffe8aa 376 PIRSF PIRSF037420 14 376 1.3E-107 T 11-10-2018 IPR017200 Coenzyme PQQ synthesis protein E YH65_09610 5a70043b196442dee7bbab89e0ffe8aa 376 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 277 365 2.5E-10 T 11-10-2018 IPR023885 4Fe4S-binding SPASM domain YH65_09610 5a70043b196442dee7bbab89e0ffe8aa 376 Pfam PF13353 4Fe-4S single cluster domain 26 135 1.1E-10 T 11-10-2018 YH65_09610 5a70043b196442dee7bbab89e0ffe8aa 376 SMART SM00729 23 224 4.0E-4 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 YH65_09610 5a70043b196442dee7bbab89e0ffe8aa 376 Pfam PF04055 Radical SAM superfamily 28 177 3.5E-20 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 YH65_09360 7a5a068891bc24e4431ea82a898c246a 239 Pfam PF02591 C4-type zinc ribbon domain 198 230 4.7E-14 T 11-10-2018 IPR003743 C4-type zinc ribbon domain YH65_09360 7a5a068891bc24e4431ea82a898c246a 239 Gene3D G3DSA:1.20.5.340 2 99 9.4E-6 T 11-10-2018 YH65_09360 7a5a068891bc24e4431ea82a898c246a 239 SUPERFAMILY SSF57997 11 168 3.6E-6 T 11-10-2018 YH65_05895 2b81983dc4e96bf59d5b73e6f5f2fc18 116 Pfam PF02641 Uncharacterized ACR, COG1993 10 105 6.0E-32 T 11-10-2018 IPR003793 Domain of unknown function DUF190 YH65_05895 2b81983dc4e96bf59d5b73e6f5f2fc18 116 Gene3D G3DSA:3.30.70.120 7 115 4.5E-34 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal YH65_05895 2b81983dc4e96bf59d5b73e6f5f2fc18 116 SUPERFAMILY SSF54913 10 106 5.23E-28 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta YH65_09705 9217db4869923b6eea4ed0d1d857af4f 465 Pfam PF00654 Voltage gated chloride channel 62 401 9.1E-70 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 YH65_09705 9217db4869923b6eea4ed0d1d857af4f 465 PRINTS PR00762 Chloride channel signature 154 173 5.4E-18 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 YH65_09705 9217db4869923b6eea4ed0d1d857af4f 465 PRINTS PR00762 Chloride channel signature 103 122 5.4E-18 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 YH65_09705 9217db4869923b6eea4ed0d1d857af4f 465 PRINTS PR00762 Chloride channel signature 352 368 5.4E-18 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 YH65_09705 9217db4869923b6eea4ed0d1d857af4f 465 PRINTS PR00762 Chloride channel signature 323 343 5.4E-18 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 YH65_09705 9217db4869923b6eea4ed0d1d857af4f 465 SUPERFAMILY SSF81340 6 414 1.44E-80 T 11-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 YH65_09705 9217db4869923b6eea4ed0d1d857af4f 465 Gene3D G3DSA:1.10.3080.10 2 419 9.1E-69 T 11-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 YH65_00390 93fe5a5408ccfd5042e36b65f3e56897 406 Gene3D G3DSA:2.40.160.60 18 406 3.6E-76 T 11-10-2018 YH65_00390 93fe5a5408ccfd5042e36b65f3e56897 406 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 10 366 1.0E-50 T 11-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) YH65_00390 93fe5a5408ccfd5042e36b65f3e56897 406 SUPERFAMILY SSF56935 18 406 7.51E-65 T 11-10-2018 YH65_10570 92af8a18bd43923a79d521ceb62109bb 93 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 4 93 13.324 T 11-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 YH65_10570 92af8a18bd43923a79d521ceb62109bb 93 Pfam PF00276 Ribosomal protein L23 8 89 9.6E-19 T 11-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 YH65_10570 92af8a18bd43923a79d521ceb62109bb 93 SUPERFAMILY SSF54189 7 89 6.47E-21 T 11-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 YH65_10570 92af8a18bd43923a79d521ceb62109bb 93 Gene3D G3DSA:3.30.70.330 3 93 5.1E-19 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily YH65_04645 3f882a77f2af1d67c6895debef1787a7 393 Pfam PF05940 NnrS protein 12 388 4.2E-60 T 11-10-2018 IPR010266 NnrS YH65_10230 c781eee8d61aa6be14d3be84f0e6929f 421 SUPERFAMILY SSF52540 3 200 9.81E-11 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_10230 c781eee8d61aa6be14d3be84f0e6929f 421 Gene3D G3DSA:3.40.50.300 2 281 1.1E-5 T 11-10-2018 YH65_07975 f87b4a7ea0aa4f83bc6fab4c776af18f 434 PIRSF PIRSF000521 20 432 1.2E-34 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YH65_07975 f87b4a7ea0aa4f83bc6fab4c776af18f 434 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 244 281 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YH65_07975 f87b4a7ea0aa4f83bc6fab4c776af18f 434 Pfam PF00202 Aminotransferase class-III 27 423 4.2E-123 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YH65_07975 f87b4a7ea0aa4f83bc6fab4c776af18f 434 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 15 427 1.9E-170 T 11-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 YH65_07975 f87b4a7ea0aa4f83bc6fab4c776af18f 434 SUPERFAMILY SSF53383 10 431 7.29E-125 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase YH65_07975 f87b4a7ea0aa4f83bc6fab4c776af18f 434 Gene3D G3DSA:3.40.640.10 65 334 2.0E-159 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 YH65_07975 f87b4a7ea0aa4f83bc6fab4c776af18f 434 Gene3D G3DSA:3.90.1150.10 14 423 2.0E-159 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 YH65_07975 f87b4a7ea0aa4f83bc6fab4c776af18f 434 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 3 432 48.032 T 11-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 YH65_02510 4d0b0dc17bc62969ed6f535940d6011c 321 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 12 32 9.1E-6 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site YH65_02510 4d0b0dc17bc62969ed6f535940d6011c 321 Pfam PF07963 Prokaryotic N-terminal methylation motif 8 31 1.0E-5 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site YH65_02510 4d0b0dc17bc62969ed6f535940d6011c 321 SUPERFAMILY SSF54523 13 123 1.73E-6 T 11-10-2018 YH65_01120 efb528c2a5a74b9225f19ded47a799dd 392 Pfam PF06965 Na+/H+ antiporter 1 6 382 7.8E-149 T 11-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 YH65_01120 efb528c2a5a74b9225f19ded47a799dd 392 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 4 388 23.436 T 11-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 YH65_01120 efb528c2a5a74b9225f19ded47a799dd 392 Gene3D G3DSA:1.20.1530.10 1 390 4.9E-150 T 11-10-2018 IPR023171 Na/H antiporter domain superfamily YH65_01120 efb528c2a5a74b9225f19ded47a799dd 392 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 7 382 1.5E-146 T 11-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 YH65_00265 128b079432cd1ddd8f9b5602e2401f54 122 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 122 69.396 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 YH65_00265 128b079432cd1ddd8f9b5602e2401f54 122 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 117 5.9E-56 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 YH65_00265 128b079432cd1ddd8f9b5602e2401f54 122 Pfam PF02261 Aspartate decarboxylase 1 114 3.8E-52 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 YH65_00265 128b079432cd1ddd8f9b5602e2401f54 122 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 92 4.0E-39 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 YH65_00265 128b079432cd1ddd8f9b5602e2401f54 122 PIRSF PIRSF006246 1 120 6.0E-52 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 YH65_00265 128b079432cd1ddd8f9b5602e2401f54 122 SUPERFAMILY SSF50692 1 115 5.8E-49 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily YH65_00265 128b079432cd1ddd8f9b5602e2401f54 122 Gene3D G3DSA:2.40.40.20 1 121 9.8E-53 T 11-10-2018 YH65_08365 504c5a0f33a1361b2ccb4f84cab94056 264 Gene3D G3DSA:2.40.30.170 20 262 7.6E-50 T 11-10-2018 YH65_08365 504c5a0f33a1361b2ccb4f84cab94056 264 Gene3D G3DSA:2.40.50.100 31 191 7.6E-50 T 11-10-2018 YH65_08365 504c5a0f33a1361b2ccb4f84cab94056 264 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 20 259 1.5E-32 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YH65_08365 504c5a0f33a1361b2ccb4f84cab94056 264 SUPERFAMILY SSF111369 20 263 1.44E-20 T 11-10-2018 YH65_08365 504c5a0f33a1361b2ccb4f84cab94056 264 Gene3D G3DSA:1.10.287.470 65 156 7.6E-50 T 11-10-2018 YH65_08365 504c5a0f33a1361b2ccb4f84cab94056 264 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 19 263 4.9E-35 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 YH65_01390 4327ceab49283275ca9c941a5ae6795f 286 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 202 214 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site YH65_01390 4327ceab49283275ca9c941a5ae6795f 286 Pfam PF00348 Polyprenyl synthetase 21 264 1.2E-52 T 11-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 YH65_01390 4327ceab49283275ca9c941a5ae6795f 286 Gene3D G3DSA:1.10.600.10 1 285 1.2E-90 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily YH65_01390 4327ceab49283275ca9c941a5ae6795f 286 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 72 88 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site YH65_01390 4327ceab49283275ca9c941a5ae6795f 286 SUPERFAMILY SSF48576 9 260 1.3E-68 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily YH65_08275 0d4d17946eb249873707cc22beb24fb2 185 Gene3D G3DSA:3.20.130.10 1 176 3.7E-70 T 11-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 YH65_08275 0d4d17946eb249873707cc22beb24fb2 185 Pfam PF05683 Fumarase C-terminus 8 175 4.5E-59 T 11-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 YH65_08275 0d4d17946eb249873707cc22beb24fb2 185 SUPERFAMILY SSF117457 3 175 9.15E-65 T 11-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 YH65_08275 0d4d17946eb249873707cc22beb24fb2 185 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 14 175 5.0E-55 T 11-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 YH65_08930 c7090a79535c3c805229bc6bfa229480 205 Gene3D G3DSA:3.40.50.300 7 113 4.1E-14 T 11-10-2018 YH65_08930 c7090a79535c3c805229bc6bfa229480 205 Pfam PF13177 DNA polymerase III, delta subunit 38 113 8.9E-13 T 11-10-2018 YH65_08930 c7090a79535c3c805229bc6bfa229480 205 SUPERFAMILY SSF52540 36 115 5.7E-13 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_06690 21102f9e45b94b43d49289ba7e911cc9 187 SUPERFAMILY SSF159594 23 182 2.88E-28 T 11-10-2018 YH65_06690 21102f9e45b94b43d49289ba7e911cc9 187 Gene3D G3DSA:3.40.50.10610 15 182 1.1E-12 T 11-10-2018 YH65_06690 21102f9e45b94b43d49289ba7e911cc9 187 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 25 181 1.6E-28 T 11-10-2018 IPR005586 ABC-type transport auxiliary lipoprotein component YH65_05440 ce81363cb81bad2f4d111f85f370178d 478 SUPERFAMILY SSF116726 149 217 2.09E-7 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 YH65_05440 ce81363cb81bad2f4d111f85f370178d 478 Gene3D G3DSA:3.30.70.1450 140 220 5.7E-9 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 YH65_03200 96ea4a50a075116fc70f79eb95efb8b5 140 SUPERFAMILY SSF74731 44 129 4.19E-5 T 11-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 YH65_03200 96ea4a50a075116fc70f79eb95efb8b5 140 Pfam PF00430 ATP synthase B/B' CF(0) 10 123 6.1E-17 T 11-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 YH65_02895 a23195d603cd95b44dc2c1f249ff5382 422 Pfam PF02441 Flavoprotein 8 175 8.8E-36 T 11-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 YH65_02895 a23195d603cd95b44dc2c1f249ff5382 422 Gene3D G3DSA:3.40.50.10300 186 421 6.4E-61 T 11-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 YH65_02895 a23195d603cd95b44dc2c1f249ff5382 422 SUPERFAMILY SSF102645 172 420 2.49E-55 T 11-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 YH65_02895 a23195d603cd95b44dc2c1f249ff5382 422 SUPERFAMILY SSF52507 5 181 2.49E-50 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 YH65_02895 a23195d603cd95b44dc2c1f249ff5382 422 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 5 415 4.7E-106 T 11-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 YH65_02895 a23195d603cd95b44dc2c1f249ff5382 422 Gene3D G3DSA:3.40.50.1950 2 185 2.2E-53 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 YH65_02895 a23195d603cd95b44dc2c1f249ff5382 422 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 188 392 3.5E-44 T 11-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 YH65_05610 42f25fbaf2b0ff8faff56d7562f1b046 217 SUPERFAMILY SSF46689 11 71 1.02E-16 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 YH65_05610 42f25fbaf2b0ff8faff56d7562f1b046 217 Gene3D G3DSA:1.10.357.10 10 211 3.2E-37 T 11-10-2018 YH65_05610 42f25fbaf2b0ff8faff56d7562f1b046 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 20 33 1.4E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YH65_05610 42f25fbaf2b0ff8faff56d7562f1b046 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 41 64 1.4E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YH65_05610 42f25fbaf2b0ff8faff56d7562f1b046 217 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 64 4.1E-16 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YH65_03135 6d9ef1fc0df43f92afa22122f7a2fa89 273 Gene3D G3DSA:3.60.110.10 1 273 1.0E-32 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily YH65_03135 6d9ef1fc0df43f92afa22122f7a2fa89 273 SUPERFAMILY SSF56317 6 262 8.11E-37 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily YH65_03135 6d9ef1fc0df43f92afa22122f7a2fa89 273 Pfam PF00795 Carbon-nitrogen hydrolase 10 256 7.2E-15 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 YH65_04500 4381d4a224cace466417113133c30c22 359 Hamap MF_02089 Epoxyqueuosine reductase QueH [queH]. 1 178 33.092 T 11-10-2018 IPR003828 Epoxyqueuosine reductase QueH MetaCyc: PWY-6700 YH65_04500 4381d4a224cace466417113133c30c22 359 Pfam PF02677 Uncharacterized BCR, COG1636 1 175 9.5E-58 T 11-10-2018 IPR003828 Epoxyqueuosine reductase QueH MetaCyc: PWY-6700 YH65_04045 7cc88b6c9f186abea227e403ac9e3820 299 Gene3D G3DSA:3.30.470.80 183 297 1.1E-23 T 11-10-2018 YH65_04045 7cc88b6c9f186abea227e403ac9e3820 299 SUPERFAMILY SSF56059 99 291 2.6E-33 T 11-10-2018 YH65_04045 7cc88b6c9f186abea227e403ac9e3820 299 Pfam PF08443 RimK-like ATP-grasp domain 97 287 1.6E-18 T 11-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 YH65_04045 7cc88b6c9f186abea227e403ac9e3820 299 Gene3D G3DSA:3.30.1490.20 99 180 7.5E-6 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 YH65_00040 bddddf19afddb02859d4ed33ec9e6442 128 Gene3D G3DSA:3.40.50.10600 2 127 1.4E-43 T 11-10-2018 IPR038396 SpoIIAA-like superfamily YH65_00040 bddddf19afddb02859d4ed33ec9e6442 128 SUPERFAMILY SSF52091 6 126 6.28E-34 T 11-10-2018 IPR036513 STAS domain superfamily YH65_00040 bddddf19afddb02859d4ed33ec9e6442 128 Pfam PF11964 SpoIIAA-like 23 126 7.6E-17 T 11-10-2018 IPR021866 SpoIIAA-like YH65_03190 c5a54e96c1729f91f9e006fb110d29dd 261 SUPERFAMILY SSF52540 1 259 1.45E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_03190 c5a54e96c1729f91f9e006fb110d29dd 261 Pfam PF13614 AAA domain 3 180 7.9E-70 T 11-10-2018 IPR025669 AAA domain YH65_03190 c5a54e96c1729f91f9e006fb110d29dd 261 Gene3D G3DSA:3.40.50.300 1 261 6.2E-78 T 11-10-2018 YH65_01580 4ea75d0908fa2c7c3b66b1294f233614 271 Pfam PF03631 Virulence factor BrkB 21 264 3.8E-43 T 11-10-2018 IPR017039 Virulence factor BrkB YH65_01580 4ea75d0908fa2c7c3b66b1294f233614 271 PIRSF PIRSF035875 1 271 2.1E-43 T 11-10-2018 IPR017039 Virulence factor BrkB YH65_01580 4ea75d0908fa2c7c3b66b1294f233614 271 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 11 264 6.1E-50 T 11-10-2018 IPR017039 Virulence factor BrkB YH65_09645 f7de996f87c662634ef588a109527411 384 Pfam PF07690 Major Facilitator Superfamily 14 225 7.9E-11 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YH65_09645 f7de996f87c662634ef588a109527411 384 Pfam PF07690 Major Facilitator Superfamily 229 378 1.5E-10 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YH65_09645 f7de996f87c662634ef588a109527411 384 Gene3D G3DSA:1.20.1250.20 204 381 5.0E-16 T 11-10-2018 YH65_09645 f7de996f87c662634ef588a109527411 384 Gene3D G3DSA:1.20.1250.20 5 198 5.5E-16 T 11-10-2018 YH65_09645 f7de996f87c662634ef588a109527411 384 SUPERFAMILY SSF103473 6 381 3.53E-45 T 11-10-2018 IPR036259 MFS transporter superfamily YH65_02365 789accaa4af6c3b9961aa22fe3a6c9e6 369 Pfam PF13884 Chaperone of endosialidase 240 289 2.3E-10 T 11-10-2018 IPR030392 Intramolecular chaperone auto-processing domain YH65_02115 3b7f4fbed5eb13cbb62307288e14f274 466 SUPERFAMILY SSF51261 179 437 2.22E-44 T 11-10-2018 IPR011055 Duplicated hybrid motif YH65_02115 3b7f4fbed5eb13cbb62307288e14f274 466 Pfam PF01551 Peptidase family M23 340 434 4.9E-23 T 11-10-2018 IPR016047 Peptidase M23 YH65_02115 3b7f4fbed5eb13cbb62307288e14f274 466 Gene3D G3DSA:2.70.70.10 275 441 1.2E-32 T 11-10-2018 IPR011055 Duplicated hybrid motif YH65_07770 f4850927a6c706fc4d756023579efdc5 64 Pfam PF09851 Short C-terminal domain 39 63 7.2E-8 T 11-10-2018 IPR018649 SHOCT domain YH65_00490 b3e5eee0525ccf900f4a962d61d5eace 187 Gene3D G3DSA:1.20.120.1200 4 163 3.1E-34 T 11-10-2018 YH65_00490 b3e5eee0525ccf900f4a962d61d5eace 187 SUPERFAMILY SSF103473 6 169 5.36E-5 T 11-10-2018 IPR036259 MFS transporter superfamily YH65_00490 b3e5eee0525ccf900f4a962d61d5eace 187 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 18 161 3.9E-30 T 11-10-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_03320 e5afb62026f82ab175c87aed342c4880 109 SUPERFAMILY SSF46785 5 83 1.9E-7 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily YH65_03320 e5afb62026f82ab175c87aed342c4880 109 Gene3D G3DSA:1.10.10.10 3 74 1.4E-5 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YH65_06400 083323e8f1429f2c8f2fc9033f063d5f 82 Gene3D G3DSA:3.40.30.10 1 75 8.7E-27 T 11-10-2018 YH65_06400 083323e8f1429f2c8f2fc9033f063d5f 82 PIRSF PIRSF037031 1 77 3.3E-29 T 11-10-2018 IPR005243 Redox-active disulphide protein 2 YH65_06400 083323e8f1429f2c8f2fc9033f063d5f 82 SUPERFAMILY SSF52833 1 75 1.06E-18 T 11-10-2018 IPR036249 Thioredoxin-like superfamily YH65_06400 083323e8f1429f2c8f2fc9033f063d5f 82 Pfam PF13192 Thioredoxin domain 1 76 8.8E-25 T 11-10-2018 IPR012336 Thioredoxin-like fold YH65_01475 1d8de8ba807160c2ed1882e5be7cea72 290 Pfam PF00483 Nucleotidyl transferase 2 241 3.1E-69 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 YH65_01475 1d8de8ba807160c2ed1882e5be7cea72 290 SUPERFAMILY SSF53448 1 286 1.69E-87 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YH65_01475 1d8de8ba807160c2ed1882e5be7cea72 290 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 287 7.1E-146 T 11-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 YH65_01475 1d8de8ba807160c2ed1882e5be7cea72 290 Gene3D G3DSA:3.90.550.10 1 290 4.9E-83 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YH65_02125 4b4f65df7e7e0cba4c884eb8c5df563e 155 Gene3D G3DSA:3.30.420.40 1 126 5.0E-8 T 11-10-2018 YH65_02125 4b4f65df7e7e0cba4c884eb8c5df563e 155 SUPERFAMILY SSF53067 10 96 1.75E-12 T 11-10-2018 YH65_07105 90d1c502ba7c153f489db940963e1e85 397 Pfam PF01636 Phosphotransferase enzyme family 261 328 3.0E-5 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase YH65_07105 90d1c502ba7c153f489db940963e1e85 397 Gene3D G3DSA:3.90.1200.10 194 394 1.4E-8 T 11-10-2018 YH65_07105 90d1c502ba7c153f489db940963e1e85 397 SUPERFAMILY SSF56112 135 327 3.02E-14 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily YH65_08555 8e127ed8cc61378b8cf4db3f709dd5f0 393 Gene3D G3DSA:3.10.400.10 1 141 1.5E-19 T 11-10-2018 YH65_08555 8e127ed8cc61378b8cf4db3f709dd5f0 393 Pfam PF01747 ATP-sulfurylase 145 345 2.8E-43 T 11-10-2018 IPR024951 Sulphate adenylyltransferase catalytic domain GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 YH65_08555 8e127ed8cc61378b8cf4db3f709dd5f0 393 SUPERFAMILY SSF52374 147 352 3.13E-49 T 11-10-2018 YH65_08555 8e127ed8cc61378b8cf4db3f709dd5f0 393 Pfam PF14306 PUA-like domain 3 134 1.4E-17 T 11-10-2018 IPR025980 ATP-sulfurylase PUA-like domain KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 YH65_08555 8e127ed8cc61378b8cf4db3f709dd5f0 393 Gene3D G3DSA:3.40.50.620 142 348 1.8E-41 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YH65_08555 8e127ed8cc61378b8cf4db3f709dd5f0 393 SUPERFAMILY SSF88697 2 135 1.89E-21 T 11-10-2018 IPR015947 PUA-like superfamily YH65_00735 a3a1a863e7424131aa62411e934998e4 407 SMART SM00722 29 176 0.52 T 11-10-2018 IPR006633 Carbohydrate-binding/sugar hydrolysis domain YH65_00735 a3a1a863e7424131aa62411e934998e4 407 SMART SM00722 184 349 17.0 T 11-10-2018 IPR006633 Carbohydrate-binding/sugar hydrolysis domain YH65_00735 a3a1a863e7424131aa62411e934998e4 407 SMART SM00710 274 295 59.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat YH65_00735 a3a1a863e7424131aa62411e934998e4 407 SMART SM00710 76 104 52.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat YH65_00735 a3a1a863e7424131aa62411e934998e4 407 SMART SM00710 156 184 2500.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat YH65_00735 a3a1a863e7424131aa62411e934998e4 407 SMART SM00710 247 268 130.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat YH65_00735 a3a1a863e7424131aa62411e934998e4 407 SMART SM00710 127 155 10000.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat YH65_00735 a3a1a863e7424131aa62411e934998e4 407 SMART SM00710 318 350 1800.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat YH65_00735 a3a1a863e7424131aa62411e934998e4 407 SMART SM00710 199 220 890.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat YH65_00735 a3a1a863e7424131aa62411e934998e4 407 SMART SM00710 105 126 660.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat YH65_00735 a3a1a863e7424131aa62411e934998e4 407 SMART SM00710 221 246 6900.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat YH65_00735 a3a1a863e7424131aa62411e934998e4 407 SUPERFAMILY SSF51126 22 391 2.26E-64 T 11-10-2018 IPR011050 Pectin lyase fold/virulence factor YH65_00735 a3a1a863e7424131aa62411e934998e4 407 TIGRFAM TIGR04247 NosD_copper_fam: nitrous oxide reductase family maturation protein NosD 22 403 8.4E-133 T 11-10-2018 IPR026464 Nitrous oxide reductase family maturation protein NosD YH65_00735 a3a1a863e7424131aa62411e934998e4 407 Gene3D G3DSA:2.160.20.10 19 348 1.2E-27 T 11-10-2018 IPR012334 Pectin lyase fold YH65_00735 a3a1a863e7424131aa62411e934998e4 407 Pfam PF05048 Periplasmic copper-binding protein (NosD) 146 366 9.9E-54 T 11-10-2018 IPR007742 Periplasmic copper-binding protein NosD, beta helix domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 YH65_00735 a3a1a863e7424131aa62411e934998e4 407 Pfam PF05048 Periplasmic copper-binding protein (NosD) 62 140 8.3E-6 T 11-10-2018 IPR007742 Periplasmic copper-binding protein NosD, beta helix domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 YH65_04225 fbbea10b8f75873c0fb872ee3895650c 368 Pfam PF01618 MotA/TolQ/ExbB proton channel family 109 202 3.9E-8 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel YH65_02965 5d2e8c678e433fcf3578357025c7b010 319 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 20 88 2.5E-18 T 11-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 YH65_02965 5d2e8c678e433fcf3578357025c7b010 319 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 121 149 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 YH65_02965 5d2e8c678e433fcf3578357025c7b010 319 SUPERFAMILY SSF51161 30 306 2.09E-66 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily YH65_02965 5d2e8c678e433fcf3578357025c7b010 319 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 7 318 1.8E-108 T 11-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 YH65_02965 5d2e8c678e433fcf3578357025c7b010 319 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 178 207 7.8E-5 T 11-10-2018 IPR001451 Hexapeptide repeat YH65_02965 5d2e8c678e433fcf3578357025c7b010 319 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 136 170 4.6E-10 T 11-10-2018 IPR001451 Hexapeptide repeat YH65_02965 5d2e8c678e433fcf3578357025c7b010 319 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 215 248 0.0016 T 11-10-2018 IPR001451 Hexapeptide repeat YH65_02965 5d2e8c678e433fcf3578357025c7b010 319 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 104 134 0.0022 T 11-10-2018 IPR001451 Hexapeptide repeat YH65_02965 5d2e8c678e433fcf3578357025c7b010 319 Gene3D G3DSA:2.160.10.10 101 299 9.4E-55 T 11-10-2018 YH65_02965 5d2e8c678e433fcf3578357025c7b010 319 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 4 317 32.787 T 11-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 YH65_02965 5d2e8c678e433fcf3578357025c7b010 319 Gene3D G3DSA:3.40.1390.10 1 98 3.8E-25 T 11-10-2018 YH65_10455 85bf42c292b8b4505266dbc7e01d0d6d 477 Pfam PF11853 Protein of unknown function (DUF3373) 75 477 8.4E-132 T 11-10-2018 IPR021803 Protein of unknown function DUF3373 YH65_05195 5cc5b064719ca67c31b0f7a54bb123a1 428 Gene3D G3DSA:1.10.530.10 248 414 1.8E-25 T 11-10-2018 YH65_05195 5cc5b064719ca67c31b0f7a54bb123a1 428 SUPERFAMILY SSF53955 262 413 3.38E-29 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily YH65_05195 5cc5b064719ca67c31b0f7a54bb123a1 428 Pfam PF01464 Transglycosylase SLT domain 270 365 4.1E-21 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 YH65_05725 22ab85c7c81d39c40dfcf5a99e2dff22 356 Pfam PF00990 Diguanylate cyclase, GGDEF domain 188 336 3.7E-40 T 11-10-2018 IPR000160 GGDEF domain YH65_05725 22ab85c7c81d39c40dfcf5a99e2dff22 356 SMART SM00267 174 342 5.5E-46 T 11-10-2018 IPR000160 GGDEF domain YH65_05725 22ab85c7c81d39c40dfcf5a99e2dff22 356 SUPERFAMILY SSF55073 193 344 9.42E-40 T 11-10-2018 IPR029787 Nucleotide cyclase YH65_05725 22ab85c7c81d39c40dfcf5a99e2dff22 356 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 187 337 2.5E-37 T 11-10-2018 IPR000160 GGDEF domain YH65_05725 22ab85c7c81d39c40dfcf5a99e2dff22 356 Gene3D G3DSA:3.30.70.270 184 353 2.2E-49 T 11-10-2018 YH65_06540 645223ade6139d411f544ea27802557c 264 Pfam PF01975 Survival protein SurE 7 198 3.8E-59 T 11-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 YH65_06540 645223ade6139d411f544ea27802557c 264 SUPERFAMILY SSF64167 6 263 5.62E-79 T 11-10-2018 YH65_06540 645223ade6139d411f544ea27802557c 264 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 6 250 1.8E-68 T 11-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 YH65_06540 645223ade6139d411f544ea27802557c 264 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 5 264 36.921 T 11-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 YH65_06540 645223ade6139d411f544ea27802557c 264 Gene3D G3DSA:3.40.1210.10 1 264 8.6E-86 T 11-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 YH65_09210 e2d418df322aee041c3a8d016f42ad67 96 PRINTS PR01853 Bacterial YajC preprotein translocase signature 47 65 7.0E-17 T 11-10-2018 IPR003849 Preprotein translocase YajC YH65_09210 e2d418df322aee041c3a8d016f42ad67 96 PRINTS PR01853 Bacterial YajC preprotein translocase signature 9 29 7.0E-17 T 11-10-2018 IPR003849 Preprotein translocase YajC YH65_09210 e2d418df322aee041c3a8d016f42ad67 96 SMART SM01323 7 89 4.0E-42 T 11-10-2018 IPR003849 Preprotein translocase YajC YH65_09210 e2d418df322aee041c3a8d016f42ad67 96 Pfam PF02699 Preprotein translocase subunit 11 87 4.0E-29 T 11-10-2018 IPR003849 Preprotein translocase YajC YH65_09210 e2d418df322aee041c3a8d016f42ad67 96 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 8 88 8.8E-33 T 11-10-2018 IPR003849 Preprotein translocase YajC YH65_01775 0df77f1908eb20ff8e5222bbaa9496f5 105 SUPERFAMILY SSF47226 34 91 1.02E-5 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 YH65_04330 8c129c870056ba182be52091fc379672 121 Gene3D G3DSA:3.40.30.10 5 121 3.5E-46 T 11-10-2018 YH65_04330 8c129c870056ba182be52091fc379672 121 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 8 119 3.9E-44 T 11-10-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 YH65_04330 8c129c870056ba182be52091fc379672 121 Pfam PF03960 ArsC family 14 115 9.0E-16 T 11-10-2018 IPR006660 Arsenate reductase-like YH65_04330 8c129c870056ba182be52091fc379672 121 SUPERFAMILY SSF52833 7 119 5.85E-34 T 11-10-2018 IPR036249 Thioredoxin-like superfamily YH65_07290 ea7489705ed63731411de8d21c235263 397 Gene3D G3DSA:2.160.10.10 215 397 1.8E-62 T 11-10-2018 YH65_07290 ea7489705ed63731411de8d21c235263 397 Pfam PF14790 Tetrahydrodipicolinate N-succinyltransferase N-terminal 10 172 8.4E-68 T 11-10-2018 YH65_07290 ea7489705ed63731411de8d21c235263 397 SUPERFAMILY SSF51161 134 336 7.49E-33 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily YH65_07290 ea7489705ed63731411de8d21c235263 397 Gene3D G3DSA:3.30.70.2010 4 173 3.9E-56 T 11-10-2018 YH65_07290 ea7489705ed63731411de8d21c235263 397 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 297 330 1.4E-12 T 11-10-2018 IPR001451 Hexapeptide repeat YH65_07290 ea7489705ed63731411de8d21c235263 397 Gene3D G3DSA:3.30.60.70 174 214 1.2E-20 T 11-10-2018 IPR038361 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain superfamily KEGG: 00300+2.3.1.117 YH65_07290 ea7489705ed63731411de8d21c235263 397 Pfam PF14789 Tetrahydrodipicolinate N-succinyltransferase middle 174 214 1.3E-15 T 11-10-2018 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117 YH65_07290 ea7489705ed63731411de8d21c235263 397 Hamap MF_02122 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 25 397 43.211 T 11-10-2018 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family GO:0008666 KEGG: 00300+2.3.1.117 YH65_03400 eda4e037d8989bda88249f34430a0777 394 Pfam PF05977 Transmembrane secretion effector 7 341 3.1E-18 T 11-10-2018 IPR010290 Transmembrane secretion effector YH65_03400 eda4e037d8989bda88249f34430a0777 394 Gene3D G3DSA:1.20.1250.20 8 389 7.4E-26 T 11-10-2018 YH65_03400 eda4e037d8989bda88249f34430a0777 394 SUPERFAMILY SSF103473 8 391 5.36E-31 T 11-10-2018 IPR036259 MFS transporter superfamily YH65_01015 38d3c588d6e05be94b13c552b9a74059 291 Pfam PF01531 Glycosyl transferase family 11 3 289 5.0E-38 T 11-10-2018 IPR002516 Glycosyl transferase, family 11 GO:0005975|GO:0008107|GO:0016020 MetaCyc: PWY-7831|MetaCyc: PWY-7833 YH65_01015 38d3c588d6e05be94b13c552b9a74059 291 Gene3D G3DSA:3.40.50.11350 141 277 6.3E-8 T 11-10-2018 YH65_09950 48663c698b6d40ada2eec84aa98e91d4 222 SUPERFAMILY SSF88697 11 64 1.96E-5 T 11-10-2018 IPR015947 PUA-like superfamily YH65_09950 48663c698b6d40ada2eec84aa98e91d4 222 Pfam PF04452 RNA methyltransferase 15 220 2.9E-34 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 YH65_09950 48663c698b6d40ada2eec84aa98e91d4 222 PIRSF PIRSF015601 1 222 3.3E-34 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 YH65_09950 48663c698b6d40ada2eec84aa98e91d4 222 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 4 219 1.9E-36 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 YH65_09950 48663c698b6d40ada2eec84aa98e91d4 222 Gene3D G3DSA:3.40.1280.10 2 222 3.3E-28 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YH65_09950 48663c698b6d40ada2eec84aa98e91d4 222 SUPERFAMILY SSF75217 75 221 2.62E-26 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases YH65_05285 74118c6b788163bb41e9860ca3373611 422 SUPERFAMILY SSF56672 2 269 2.52E-54 T 11-10-2018 YH65_05285 74118c6b788163bb41e9860ca3373611 422 SUPERFAMILY SSF100879 279 363 1.47E-6 T 11-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 YH65_05285 74118c6b788163bb41e9860ca3373611 422 Pfam PF00817 impB/mucB/samB family 5 198 5.5E-49 T 11-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 YH65_05285 74118c6b788163bb41e9860ca3373611 422 Gene3D G3DSA:3.30.1490.100 280 384 9.0E-7 T 11-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 YH65_05285 74118c6b788163bb41e9860ca3373611 422 Pfam PF11799 impB/mucB/samB family C-terminal domain 275 379 7.6E-5 T 11-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 YH65_03660 fddd380fa2ac0ed826a0cb6b2c198e00 267 Pfam PF03008 Archaea bacterial proteins of unknown function 124 212 1.1E-18 T 11-10-2018 IPR004256 Domain of unknown function DUF234, DEXX-box ATPase C-terminal YH65_03660 fddd380fa2ac0ed826a0cb6b2c198e00 267 SUPERFAMILY SSF52980 159 250 5.36E-5 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 YH65_07465 d2eb432609f78dfb8d19cf2a568da79b 118 Gene3D G3DSA:3.30.565.10 2 118 1.3E-12 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YH65_07465 d2eb432609f78dfb8d19cf2a568da79b 118 Pfam PF13581 Histidine kinase-like ATPase domain 6 111 3.4E-11 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase YH65_10755 fb4c1823f7ba0cc30d2ad78e918f4766 72 Pfam PF11127 Protein of unknown function (DUF2892) 7 65 5.5E-6 T 11-10-2018 IPR021309 Protein of unknown function DUF2892 YH65_06865 c67dd4d0a4309b603056925f984e81b3 228 SUPERFAMILY SSF53335 34 208 3.24E-6 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YH65_02930 0a15cf3f576e44566eee1ba5864f7f40 364 SUPERFAMILY SSF52540 143 356 4.78E-8 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_02930 0a15cf3f576e44566eee1ba5864f7f40 364 Gene3D G3DSA:3.40.250.10 11 135 1.9E-34 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily YH65_02930 0a15cf3f576e44566eee1ba5864f7f40 364 SUPERFAMILY SSF52821 15 135 4.71E-22 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily YH65_02930 0a15cf3f576e44566eee1ba5864f7f40 364 Hamap MF_01622 tRNA 2-selenouridine synthase [selU]. 3 363 48.464 T 11-10-2018 IPR017582 tRNA 2-selenouridine/geranyl-2-thiouridine synthase GO:0016785|GO:0043828|GO:0070329 YH65_02930 0a15cf3f576e44566eee1ba5864f7f40 364 Pfam PF00581 Rhodanese-like domain 18 129 2.7E-5 T 11-10-2018 IPR001763 Rhodanese-like domain YH65_02930 0a15cf3f576e44566eee1ba5864f7f40 364 SMART SM00450 4 134 1.8E-9 T 11-10-2018 IPR001763 Rhodanese-like domain YH65_02930 0a15cf3f576e44566eee1ba5864f7f40 364 TIGRFAM TIGR03167 tRNA_sel_U_synt: tRNA 2-selenouridine synthase 17 347 3.5E-107 T 11-10-2018 IPR017582 tRNA 2-selenouridine/geranyl-2-thiouridine synthase GO:0016785|GO:0043828|GO:0070329 YH65_06970 fca72e742df12a154ab02573c901c8d2 285 Pfam PF03547 Membrane transport protein 5 123 1.1E-7 T 11-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 YH65_06970 fca72e742df12a154ab02573c901c8d2 285 Pfam PF03547 Membrane transport protein 137 276 4.9E-7 T 11-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 YH65_08705 e94f27be1b6e5b81d3c9a81567461db7 507 Gene3D G3DSA:2.40.160.10 162 507 5.5E-19 T 11-10-2018 IPR023614 Porin domain superfamily YH65_09710 6ec1191e41598870d19972145e2027c4 168 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 53 162 1.2E-17 T 11-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_09710 6ec1191e41598870d19972145e2027c4 168 SUPERFAMILY SSF56770 37 168 1.83E-44 T 11-10-2018 YH65_09710 6ec1191e41598870d19972145e2027c4 168 Gene3D G3DSA:3.40.50.12280 14 168 2.5E-43 T 11-10-2018 YH65_03675 da06b51960fc3c991881a3918b58b7ea 270 Pfam PF04305 Protein of unknown function (DUF455) 13 261 1.8E-81 T 11-10-2018 IPR007402 Protein of unknown function DUF455 YH65_03675 da06b51960fc3c991881a3918b58b7ea 270 SUPERFAMILY SSF47240 59 233 1.18E-9 T 11-10-2018 IPR009078 Ferritin-like superfamily YH65_03675 da06b51960fc3c991881a3918b58b7ea 270 PIRSF PIRSF012318 1 269 1.5E-74 T 11-10-2018 IPR011197 Uncharacterised conserved protein UCP012318 YH65_00765 0a8e038eeeea3ebc58b2546b620702ea 157 SUPERFAMILY SSF160387 54 125 1.31E-10 T 11-10-2018 YH65_00765 0a8e038eeeea3ebc58b2546b620702ea 157 Pfam PF05573 NosL 18 112 3.8E-6 T 11-10-2018 IPR008719 Nitrous oxide reductase accessory protein NosL YH65_01955 622fbb914c47e5f2b4d1a8f6813993c5 590 Pfam PF08811 Protein of unknown function (DUF1800) 21 576 1.3E-87 T 11-10-2018 IPR014917 Protein of unknown function DUF1800 YH65_06480 6f6e914f773e7c637c490cf06dbfdde1 449 PIRSF PIRSF015658 73 449 1.6E-161 T 11-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 YH65_06480 6f6e914f773e7c637c490cf06dbfdde1 449 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 91 443 5.1E-159 T 11-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 YH65_06480 6f6e914f773e7c637c490cf06dbfdde1 449 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 92 448 1.3E-149 T 11-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 YH65_08005 a1a254d4da4e37cb6385e0121ee0ba41 417 Pfam PF06629 MltA-interacting protein MipA 38 223 9.8E-18 T 11-10-2018 IPR010583 MltA-interacting MipA YH65_01590 5cbade61a92e92821aee963506e774f6 226 Pfam PF15436 Plasminogen-binding protein pgbA N-terminal 37 220 1.3E-46 T 11-10-2018 IPR029276 Plasminogen-binding protein PgbA, N-terminal YH65_02020 cadd0b92b3963384ad98f30e4f01f7b8 305 SUPERFAMILY SSF53300 80 263 9.94E-36 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily YH65_02020 cadd0b92b3963384ad98f30e4f01f7b8 305 Pfam PF00092 von Willebrand factor type A domain 84 260 1.8E-25 T 11-10-2018 IPR002035 von Willebrand factor, type A YH65_02020 cadd0b92b3963384ad98f30e4f01f7b8 305 PRINTS PR00453 Von Willebrand factor type A domain signature 189 197 1.7E-5 T 11-10-2018 YH65_02020 cadd0b92b3963384ad98f30e4f01f7b8 305 PRINTS PR00453 Von Willebrand factor type A domain signature 128 142 1.7E-5 T 11-10-2018 YH65_02020 cadd0b92b3963384ad98f30e4f01f7b8 305 PRINTS PR00453 Von Willebrand factor type A domain signature 83 100 1.7E-5 T 11-10-2018 YH65_02020 cadd0b92b3963384ad98f30e4f01f7b8 305 Gene3D G3DSA:3.40.50.410 82 267 2.7E-47 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily YH65_02020 cadd0b92b3963384ad98f30e4f01f7b8 305 SMART SM00327 82 266 1.5E-24 T 11-10-2018 IPR002035 von Willebrand factor, type A YH65_03010 75a19dde64e2e01c81dbf3b3807e8e55 423 SUPERFAMILY SSF53187 1 422 7.07E-45 T 11-10-2018 YH65_03010 75a19dde64e2e01c81dbf3b3807e8e55 423 Gene3D G3DSA:3.40.630.10 1 200 6.9E-44 T 11-10-2018 YH65_03010 75a19dde64e2e01c81dbf3b3807e8e55 423 Gene3D G3DSA:3.40.630.10 263 423 7.6E-19 T 11-10-2018 YH65_03010 75a19dde64e2e01c81dbf3b3807e8e55 423 PRINTS PR00934 X-His dipeptidase (M25) signature 176 193 7.5E-10 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 YH65_03010 75a19dde64e2e01c81dbf3b3807e8e55 423 PRINTS PR00934 X-His dipeptidase (M25) signature 78 96 7.5E-10 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 YH65_03010 75a19dde64e2e01c81dbf3b3807e8e55 423 Pfam PF01546 Peptidase family M20/M25/M40 57 421 1.2E-12 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 YH65_00480 d77460b5788bbc4a8884b908992b4146 343 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 13 343 22.457 T 11-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_00480 d77460b5788bbc4a8884b908992b4146 343 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 59 74 - T 11-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_00480 d77460b5788bbc4a8884b908992b4146 343 Pfam PF00146 NADH dehydrogenase 20 337 5.8E-107 T 11-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_04725 2ffe6c0718826ca6897dd1c0ae84351f 334 Gene3D G3DSA:3.40.50.300 2 161 1.1E-23 T 11-10-2018 YH65_04725 2ffe6c0718826ca6897dd1c0ae84351f 334 SUPERFAMILY SSF52540 17 155 1.16E-16 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_04725 2ffe6c0718826ca6897dd1c0ae84351f 334 SMART SM00382 16 158 0.0016 T 11-10-2018 IPR003593 AAA+ ATPase domain YH65_04725 2ffe6c0718826ca6897dd1c0ae84351f 334 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 20 150 3.4E-8 T 11-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 YH65_07595 6d2b7b2611b8ab28ba6e0783ccdb4ea0 432 Pfam PF13579 Glycosyl transferase 4-like domain 123 215 3.3E-7 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 YH65_07595 6d2b7b2611b8ab28ba6e0783ccdb4ea0 432 Gene3D G3DSA:3.40.50.2000 27 235 2.1E-6 T 11-10-2018 YH65_07595 6d2b7b2611b8ab28ba6e0783ccdb4ea0 432 Gene3D G3DSA:3.40.50.2000 236 396 1.5E-8 T 11-10-2018 YH65_07595 6d2b7b2611b8ab28ba6e0783ccdb4ea0 432 SUPERFAMILY SSF53756 24 393 2.77E-19 T 11-10-2018 YH65_00200 9494c2143c1201bf12655cb8d73dccd3 228 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 23 221 1.1E-46 T 11-10-2018 IPR006214 Bax inhibitor 1-related YH65_00110 ce715e95cb2a69230aee52893b416e9b 160 TIGRFAM TIGR04178 exo_archaeo: exosortase/archaeosortase family protein 65 153 3.9E-14 T 11-10-2018 IPR026392 Exosortase/Archaeosortase domain YH65_00110 ce715e95cb2a69230aee52893b416e9b 160 Pfam PF09721 Transmembrane exosortase (Exosortase_EpsH) 9 151 8.5E-13 T 11-10-2018 IPR019127 Exosortase YH65_02390 1f24ba7d44310df2e607ad54bf170155 277 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 2 266 1.1E-118 T 11-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 YH65_02390 1f24ba7d44310df2e607ad54bf170155 277 Gene3D G3DSA:3.90.550.10 1 276 1.9E-78 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YH65_02390 1f24ba7d44310df2e607ad54bf170155 277 Pfam PF00483 Nucleotidyl transferase 9 268 4.5E-29 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 YH65_02390 1f24ba7d44310df2e607ad54bf170155 277 SUPERFAMILY SSF53448 2 272 1.17E-61 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YH65_05350 b6891a26eef8162eb88cb250e7c3e8c8 236 Pfam PF01553 Acyltransferase 67 177 5.4E-23 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 YH65_05350 b6891a26eef8162eb88cb250e7c3e8c8 236 SMART SM00563 65 180 7.7E-30 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 YH65_05350 b6891a26eef8162eb88cb250e7c3e8c8 236 SUPERFAMILY SSF69593 67 234 1.57E-32 T 11-10-2018 YH65_09915 a0c963cbb793a73b9dd71c303de64386 336 SUPERFAMILY SSF52980 170 324 9.12E-21 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 YH65_09915 a0c963cbb793a73b9dd71c303de64386 336 Gene3D G3DSA:3.40.1350.10 197 336 2.7E-7 T 11-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 YH65_10070 6b86e6f0ab2333232d64993a9b9fc933 187 SUPERFAMILY SSF53323 1 187 7.19E-40 T 11-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 YH65_10070 6b86e6f0ab2333232d64993a9b9fc933 187 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 10 183 8.2E-30 T 11-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 YH65_10070 6b86e6f0ab2333232d64993a9b9fc933 187 Gene3D G3DSA:3.40.920.10 1 187 4.7E-50 T 11-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 YH65_10070 6b86e6f0ab2333232d64993a9b9fc933 187 TIGRFAM TIGR02175 PorC_KorC: 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family 1 187 4.3E-46 T 11-10-2018 IPR011894 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate GO:0016625|GO:0055114 YH65_10105 d0a2a7c9158505059c582e33c900bd59 273 Pfam PF01327 Polypeptide deformylase 3 149 8.6E-27 T 11-10-2018 IPR023635 Peptide deformylase YH65_10105 d0a2a7c9158505059c582e33c900bd59 273 SUPERFAMILY SSF56420 1 157 5.63E-29 T 11-10-2018 IPR036821 Peptide deformylase superfamily YH65_10105 d0a2a7c9158505059c582e33c900bd59 273 Gene3D G3DSA:3.90.45.10 1 160 9.9E-23 T 11-10-2018 IPR036821 Peptide deformylase superfamily YH65_07135 9343f9c95295ae04fb20933305a47501 243 PIRSF PIRSF016557 18 237 5.2E-50 T 11-10-2018 IPR016667 Capsular polysaccharide synthesis, CpsB/CapC GO:0004725|GO:0030145 YH65_07135 9343f9c95295ae04fb20933305a47501 243 Gene3D G3DSA:3.20.20.140 19 242 2.1E-68 T 11-10-2018 YH65_07135 9343f9c95295ae04fb20933305a47501 243 SUPERFAMILY SSF89550 17 222 1.28E-20 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 YH65_02410 19e39b5aab29e6d42b6ad8c27cea800d 193 Pfam PF07437 YfaZ precursor 22 193 2.4E-8 T 11-10-2018 IPR009998 YfaZ YH65_06685 9f0f956bf68ac454e65255c398c2fbf4 203 Gene3D G3DSA:2.40.160.20 37 203 2.1E-18 T 11-10-2018 YH65_06685 9f0f956bf68ac454e65255c398c2fbf4 203 SUPERFAMILY SSF56925 38 203 2.3E-21 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel YH65_06685 9f0f956bf68ac454e65255c398c2fbf4 203 Pfam PF13505 Outer membrane protein beta-barrel domain 36 203 9.1E-17 T 11-10-2018 IPR027385 Outer membrane protein beta-barrel YH65_10725 08706db1e71133c76fc409dfd10dc384 166 Pfam PF13618 Gluconate 2-dehydrogenase subunit 3 36 149 5.6E-12 T 11-10-2018 IPR027056 Gluconate 2-dehydrogenase subunit 3 KEGG: 00030+1.1.99.3|MetaCyc: PWY-7165 YH65_02065 876b9e22d598a3640c0bc50d272765a6 699 Pfam PF07085 DRTGG domain 213 328 1.9E-25 T 11-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 YH65_02065 876b9e22d598a3640c0bc50d272765a6 699 SUPERFAMILY SSF75138 209 333 3.1E-23 T 11-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily YH65_02065 876b9e22d598a3640c0bc50d272765a6 699 Gene3D G3DSA:3.40.50.10750 513 666 4.8E-140 T 11-10-2018 YH65_02065 876b9e22d598a3640c0bc50d272765a6 699 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 389 690 1.3E-124 T 11-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 YH65_02065 876b9e22d598a3640c0bc50d272765a6 699 Gene3D G3DSA:3.40.50.10950 380 693 4.8E-140 T 11-10-2018 YH65_02065 876b9e22d598a3640c0bc50d272765a6 699 SUPERFAMILY SSF52540 4 220 2.83E-10 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_02065 876b9e22d598a3640c0bc50d272765a6 699 PIRSF PIRSF006107 2 698 5.4E-188 T 11-10-2018 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 YH65_02065 876b9e22d598a3640c0bc50d272765a6 699 SUPERFAMILY SSF53659 373 695 9.05E-96 T 11-10-2018 YH65_02065 876b9e22d598a3640c0bc50d272765a6 699 Pfam PF13500 AAA domain 5 205 2.0E-15 T 11-10-2018 YH65_02065 876b9e22d598a3640c0bc50d272765a6 699 Gene3D G3DSA:3.40.1390.20 204 350 4.4E-25 T 11-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily YH65_02065 876b9e22d598a3640c0bc50d272765a6 699 Pfam PF01515 Phosphate acetyl/butaryl transferase 373 690 2.4E-129 T 11-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 YH65_01100 923c178086f75e98ad5dd504f2c1110d 112 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 81 110 3.0E-7 T 11-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 YH65_01100 923c178086f75e98ad5dd504f2c1110d 112 Gene3D G3DSA:1.20.120.910 1 112 2.1E-15 T 11-10-2018 YH65_01100 923c178086f75e98ad5dd504f2c1110d 112 SUPERFAMILY SSF57716 81 110 1.12E-5 T 11-10-2018 YH65_08335 18054fb6bbf4f27011e34681d49fdf64 361 Gene3D G3DSA:1.20.120.20 226 357 5.1E-5 T 11-10-2018 YH65_07340 f8ee30449e6f8e9bc9671c9b558b801d 301 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 8 298 7.7E-66 T 11-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 YH65_07340 f8ee30449e6f8e9bc9671c9b558b801d 301 Pfam PF03186 CobD/Cbib protein 7 282 9.3E-88 T 11-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 YH65_07340 f8ee30449e6f8e9bc9671c9b558b801d 301 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 301 75.982 T 11-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 YH65_04010 b9889f5f9e1a697469b35784d6db7c7f 203 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 31 159 5.8E-36 T 11-10-2018 IPR018639 Domain of unknown function DUF2062 YH65_00750 a43cf8c8fc4ddcc90782769986ff59c4 177 Gene3D G3DSA:1.10.760.10 96 165 1.6E-13 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_00750 a43cf8c8fc4ddcc90782769986ff59c4 177 SUPERFAMILY SSF46626 100 163 3.87E-14 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_00750 a43cf8c8fc4ddcc90782769986ff59c4 177 Pfam PF00034 Cytochrome c 100 175 6.2E-6 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YH65_10210 f559c80922cd38d2850a0ed79e659254 416 Gene3D G3DSA:3.40.50.300 6 313 1.4E-9 T 11-10-2018 YH65_10210 f559c80922cd38d2850a0ed79e659254 416 SUPERFAMILY SSF52540 4 198 1.99E-7 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_03785 bbc8546d8bdd00f31775c3bd6b252251 407 Pfam PF13657 HipA N-terminal domain 17 117 1.7E-16 T 11-10-2018 IPR017508 HipA, N-terminal subdomain 1 YH65_03785 bbc8546d8bdd00f31775c3bd6b252251 407 Pfam PF07804 HipA-like C-terminal domain 160 375 9.2E-46 T 11-10-2018 IPR012893 HipA-like, C-terminal YH65_06020 0429f42f08ba6bf8281322e0e9adf8eb 466 Pfam PF03573 outer membrane porin, OprD family 37 183 2.6E-12 T 11-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 YH65_06020 0429f42f08ba6bf8281322e0e9adf8eb 466 Gene3D G3DSA:2.40.160.10 34 203 1.7E-19 T 11-10-2018 IPR023614 Porin domain superfamily YH65_06020 0429f42f08ba6bf8281322e0e9adf8eb 466 Gene3D G3DSA:2.40.160.10 220 466 2.0E-13 T 11-10-2018 IPR023614 Porin domain superfamily YH65_00185 699b89360af8a82418e46e3c65ca014c 185 SUPERFAMILY SSF55194 3 184 1.06E-68 T 11-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 YH65_00185 699b89360af8a82418e46e3c65ca014c 185 Gene3D G3DSA:3.30.1360.40 31 105 3.5E-67 T 11-10-2018 YH65_00185 699b89360af8a82418e46e3c65ca014c 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 26.539 T 11-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 YH65_00185 699b89360af8a82418e46e3c65ca014c 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 4.8E-75 T 11-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 YH65_00185 699b89360af8a82418e46e3c65ca014c 185 Pfam PF01765 Ribosome recycling factor 20 183 5.2E-62 T 11-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 YH65_00185 699b89360af8a82418e46e3c65ca014c 185 Gene3D G3DSA:1.10.132.20 12 182 3.5E-67 T 11-10-2018 YH65_08470 a5d752264f6dfc4306466a0d8728cf78 230 Pfam PF01633 Choline/ethanolamine kinase 123 197 1.7E-15 T 11-10-2018 YH65_08470 a5d752264f6dfc4306466a0d8728cf78 230 SUPERFAMILY SSF56112 25 216 1.13E-32 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily YH65_08470 a5d752264f6dfc4306466a0d8728cf78 230 Gene3D G3DSA:3.30.200.20 1 85 2.3E-8 T 11-10-2018 YH65_08470 a5d752264f6dfc4306466a0d8728cf78 230 Gene3D G3DSA:3.90.1200.10 86 229 2.6E-27 T 11-10-2018 YH65_04335 61a0ed45382e1d6ff17e7740f94c0efc 109 Gene3D G3DSA:1.10.760.10 42 103 1.1E-17 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_04335 61a0ed45382e1d6ff17e7740f94c0efc 109 SUPERFAMILY SSF46626 42 106 6.13E-10 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_04625 3fdd61b79f483a7de50da6652ad04b52 315 Pfam PF01636 Phosphotransferase enzyme family 18 239 1.3E-25 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase YH65_04625 3fdd61b79f483a7de50da6652ad04b52 315 Gene3D G3DSA:3.90.1200.10 89 315 1.0E-75 T 11-10-2018 YH65_04625 3fdd61b79f483a7de50da6652ad04b52 315 SUPERFAMILY SSF56112 5 302 1.64E-46 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily YH65_04625 3fdd61b79f483a7de50da6652ad04b52 315 Gene3D G3DSA:3.30.200.20 1 88 1.7E-17 T 11-10-2018 YH65_06380 57a441f853d6ec62306866e448b6da2e 290 Pfam PF00034 Cytochrome c 176 255 2.8E-9 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YH65_06380 57a441f853d6ec62306866e448b6da2e 290 SUPERFAMILY SSF46626 169 263 4.03E-16 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_06380 57a441f853d6ec62306866e448b6da2e 290 SUPERFAMILY SSF46626 50 141 1.41E-12 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_06380 57a441f853d6ec62306866e448b6da2e 290 Gene3D G3DSA:1.10.760.10 163 274 2.3E-25 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_06380 57a441f853d6ec62306866e448b6da2e 290 Gene3D G3DSA:1.10.760.10 16 145 5.2E-30 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_06850 5ee231ff8d15f917fa234e52a32eeb8f 207 Gene3D G3DSA:2.60.120.560 29 203 3.8E-24 T 11-10-2018 YH65_03210 65dc9d48f9d8e3628d375fda347b6e29 175 Pfam PF00213 ATP synthase delta (OSCP) subunit 5 155 4.9E-24 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YH65_03210 65dc9d48f9d8e3628d375fda347b6e29 175 Hamap MF_01416 ATP synthase subunit delta [atpD]. 1 173 13.102 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YH65_03210 65dc9d48f9d8e3628d375fda347b6e29 175 Gene3D G3DSA:1.10.520.20 2 102 1.9E-13 T 11-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YH65_03210 65dc9d48f9d8e3628d375fda347b6e29 175 SUPERFAMILY SSF47928 3 94 8.24E-17 T 11-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YH65_03210 65dc9d48f9d8e3628d375fda347b6e29 175 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 5 152 7.2E-18 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 YH65_08595 a14d1e21c983c474a7da5d464b9e4496 215 Gene3D G3DSA:1.10.3480.10 2 207 1.0E-27 T 11-10-2018 YH65_08595 a14d1e21c983c474a7da5d464b9e4496 215 SUPERFAMILY SSF89155 8 203 3.92E-35 T 11-10-2018 IPR036411 TorD-like superfamily YH65_08595 a14d1e21c983c474a7da5d464b9e4496 215 Pfam PF02613 Nitrate reductase delta subunit 66 172 8.3E-15 T 11-10-2018 IPR020945 DMSO/Nitrate reductase chaperone YH65_06270 12f584bc54878b71c8407ab1564b1057 86 SMART SM00899 1 73 1.6E-25 T 11-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 YH65_06270 12f584bc54878b71c8407ab1564b1057 86 Gene3D G3DSA:2.30.30.90 1 84 6.2E-26 T 11-10-2018 IPR038157 Ferrous iron transporter, core domain YH65_06270 12f584bc54878b71c8407ab1564b1057 86 Pfam PF04023 FeoA domain 1 73 7.3E-21 T 11-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 YH65_06270 12f584bc54878b71c8407ab1564b1057 86 SUPERFAMILY SSF50037 4 74 2.08E-19 T 11-10-2018 IPR008988 Transcriptional repressor, C-terminal YH65_00670 10fd1e98a29188dd44ad20d1764cc8a3 114 SUPERFAMILY SSF158682 7 109 1.07E-5 T 11-10-2018 IPR029024 TerB-like YH65_00670 10fd1e98a29188dd44ad20d1764cc8a3 114 Pfam PF05099 Tellurite resistance protein TerB 6 93 4.6E-5 T 11-10-2018 IPR007791 Co-chaperone DjlA, N-terminal YH65_04000 044652d0c05a47ad83d4b66bb13a82d6 158 Gene3D G3DSA:2.30.330.10 95 158 8.2E-7 T 11-10-2018 IPR036429 SpoA-like superfamily YH65_04000 044652d0c05a47ad83d4b66bb13a82d6 158 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 111 155 4.3E-6 T 11-10-2018 IPR001543 Surface presentation of antigen (SpoA) YH65_00815 02832ec58a7f5251b628e78d1077ea27 167 SUPERFAMILY SSF160387 66 138 1.88E-9 T 11-10-2018 YH65_04280 80ff3fd66f1c1d02360331b3ebb5e048 426 SUPERFAMILY SSF103473 9 414 2.88E-46 T 11-10-2018 IPR036259 MFS transporter superfamily YH65_04280 80ff3fd66f1c1d02360331b3ebb5e048 426 Pfam PF07690 Major Facilitator Superfamily 25 373 2.8E-32 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YH65_04280 80ff3fd66f1c1d02360331b3ebb5e048 426 Gene3D G3DSA:1.20.1250.20 210 417 1.6E-37 T 11-10-2018 YH65_04280 80ff3fd66f1c1d02360331b3ebb5e048 426 Gene3D G3DSA:1.20.1250.20 10 197 2.6E-32 T 11-10-2018 YH65_04525 5d7f3aac018c3c886a96aa218d45f98b 234 Pfam PF03734 L,D-transpeptidase catalytic domain 35 210 4.2E-5 T 11-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 YH65_05795 918537b705fd07dbb408322eba86d1fc 486 SUPERFAMILY SSF51905 6 311 3.6E-19 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_05795 918537b705fd07dbb408322eba86d1fc 486 Gene3D G3DSA:3.50.50.60 3 98 8.7E-10 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_05795 918537b705fd07dbb408322eba86d1fc 486 Pfam PF01266 FAD dependent oxidoreductase 9 375 1.1E-12 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 YH65_09530 5082e61d10b3820f1bc74e51b4eeabb2 119 Gene3D G3DSA:3.30.70.920 1 71 1.2E-11 T 11-10-2018 YH65_09530 5082e61d10b3820f1bc74e51b4eeabb2 119 Pfam PF03927 NapD protein 1 77 1.1E-20 T 11-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly YH65_09530 5082e61d10b3820f1bc74e51b4eeabb2 119 Hamap MF_02200 Chaperone NapD [napD]. 1 78 16.903 T 11-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly YH65_04170 f6a777d740ae0768d7973e476efe8e68 183 Pfam PF04366 Las17-binding protein actin regulator 96 180 9.3E-10 T 11-10-2018 IPR007461 Ysc84 actin-binding domain YH65_06170 e44206e1a970365d3a55deb43c4b89fa 180 Pfam PF02926 THUMP domain 39 165 8.3E-8 T 11-10-2018 IPR004114 THUMP domain GO:0003723 YH65_06170 e44206e1a970365d3a55deb43c4b89fa 180 SMART SM00981 68 167 4.7E-6 T 11-10-2018 IPR004114 THUMP domain GO:0003723 YH65_06170 e44206e1a970365d3a55deb43c4b89fa 180 SUPERFAMILY SSF143437 31 167 4.71E-9 T 11-10-2018 YH65_04760 27195d255cc95705f616fc9127ff7ee0 268 SUPERFAMILY SSF81345 4 257 1.7E-33 T 11-10-2018 IPR037294 ABC transporter, BtuC-like YH65_04760 27195d255cc95705f616fc9127ff7ee0 268 Pfam PF00950 ABC 3 transport family 7 256 1.8E-65 T 11-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 YH65_02920 682c4c247150bf048e2c90a322987d97 154 Gene3D G3DSA:3.40.50.1000 7 153 6.8E-12 T 11-10-2018 IPR023214 HAD superfamily YH65_02920 682c4c247150bf048e2c90a322987d97 154 SUPERFAMILY SSF56784 14 122 9.29E-11 T 11-10-2018 IPR036412 HAD-like superfamily YH65_07920 80f0117de59c8928cb176358ce23a8e1 277 Pfam PF13462 Thioredoxin 123 265 1.5E-13 T 11-10-2018 IPR012336 Thioredoxin-like fold YH65_07920 80f0117de59c8928cb176358ce23a8e1 277 SUPERFAMILY SSF52833 112 266 1.43E-24 T 11-10-2018 IPR036249 Thioredoxin-like superfamily YH65_07920 80f0117de59c8928cb176358ce23a8e1 277 Gene3D G3DSA:3.40.30.10 99 277 1.2E-23 T 11-10-2018 YH65_09620 8c2c32d60d90a7408c6af507fc97c3be 379 SUPERFAMILY SSF48695 23 234 1.72E-20 T 11-10-2018 IPR036280 Multiheme cytochrome superfamily YH65_09620 8c2c32d60d90a7408c6af507fc97c3be 379 Pfam PF13435 Cytochrome c554 and c-prime 25 105 9.1E-6 T 11-10-2018 IPR023155 Cytochrome c-552/4 YH65_00900 a43769b83af498e6b3131229de337e96 236 Pfam PF02563 Polysaccharide biosynthesis/export protein 32 115 1.5E-19 T 11-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 YH65_00900 a43769b83af498e6b3131229de337e96 236 Gene3D G3DSA:3.10.560.10 95 201 8.8E-20 T 11-10-2018 YH65_00900 a43769b83af498e6b3131229de337e96 236 Pfam PF10531 SLBB domain 120 162 7.6E-10 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_07085 c5e15ff628a23fb56fe54cfc762a5154 366 Pfam PF00534 Glycosyl transferases group 1 175 337 1.0E-25 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 YH65_07085 c5e15ff628a23fb56fe54cfc762a5154 366 Gene3D G3DSA:3.40.50.2000 162 348 2.4E-36 T 11-10-2018 YH65_07085 c5e15ff628a23fb56fe54cfc762a5154 366 Gene3D G3DSA:3.40.50.2000 98 353 2.4E-36 T 11-10-2018 YH65_07085 c5e15ff628a23fb56fe54cfc762a5154 366 SUPERFAMILY SSF53756 49 359 1.88E-40 T 11-10-2018 YH65_04980 760f5525c88054687af5f572d12180b6 209 SUPERFAMILY SSF101874 71 176 4.32E-8 T 11-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily YH65_04980 760f5525c88054687af5f572d12180b6 209 Gene3D G3DSA:2.40.128.110 26 203 1.6E-13 T 11-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily YH65_04980 760f5525c88054687af5f572d12180b6 209 Pfam PF04264 YceI-like domain 26 195 4.7E-19 T 11-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like YH65_00120 231cb99bce3bae99b4faf9b80e0342ec 182 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 28 8.7E-6 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site YH65_04945 8af0b520f8fc9750e4c5e45e9cb0e80c 185 Gene3D G3DSA:1.20.120.1760 4 174 6.0E-14 T 11-10-2018 YH65_04945 8af0b520f8fc9750e4c5e45e9cb0e80c 185 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 68 6.4E-12 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 YH65_04945 8af0b520f8fc9750e4c5e45e9cb0e80c 185 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 46 68 - T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 YH65_09500 e270b2a266cc80d04e0e6c74f1a22c7e 488 PRINTS PR00834 HtrA/DegQ protease family signature 83 103 2.7E-12 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YH65_09500 e270b2a266cc80d04e0e6c74f1a22c7e 488 PRINTS PR00834 HtrA/DegQ protease family signature 162 179 2.7E-12 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YH65_09500 e270b2a266cc80d04e0e6c74f1a22c7e 488 PRINTS PR00834 HtrA/DegQ protease family signature 61 73 2.7E-12 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YH65_09500 e270b2a266cc80d04e0e6c74f1a22c7e 488 PRINTS PR00834 HtrA/DegQ protease family signature 267 279 2.7E-12 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YH65_09500 e270b2a266cc80d04e0e6c74f1a22c7e 488 Pfam PF13365 Trypsin-like peptidase domain 53 190 3.9E-22 T 11-10-2018 YH65_09500 e270b2a266cc80d04e0e6c74f1a22c7e 488 SUPERFAMILY SSF50494 24 220 1.15E-38 T 11-10-2018 IPR009003 Peptidase S1, PA clan YH65_09500 e270b2a266cc80d04e0e6c74f1a22c7e 488 Gene3D G3DSA:2.30.42.50 335 481 1.0E-33 T 11-10-2018 YH65_09500 e270b2a266cc80d04e0e6c74f1a22c7e 488 Gene3D G3DSA:2.40.10.120 17 218 2.5E-38 T 11-10-2018 YH65_09500 e270b2a266cc80d04e0e6c74f1a22c7e 488 SUPERFAMILY SSF50156 251 333 1.29E-8 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 YH65_09500 e270b2a266cc80d04e0e6c74f1a22c7e 488 Gene3D G3DSA:2.30.42.10 227 334 1.7E-15 T 11-10-2018 YH65_09500 e270b2a266cc80d04e0e6c74f1a22c7e 488 Pfam PF13180 PDZ domain 228 328 3.5E-6 T 11-10-2018 IPR001478 PDZ domain GO:0005515 YH65_09880 d0538c61da5fd3f505fe0d09194048da 170 Pfam PF10543 ORF6N domain 11 97 9.8E-35 T 11-10-2018 IPR018873 KilA-N, DNA-binding domain YH65_01505 ad0d2ef6c0e53794536e08ff119c064f 378 Pfam PF05159 Capsule polysaccharide biosynthesis protein 62 370 5.1E-79 T 11-10-2018 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 YH65_05780 c05828e07b3587cb9862afc1bd93a5d5 355 Gene3D G3DSA:3.30.2350.20 16 348 1.9E-78 T 11-10-2018 YH65_05780 c05828e07b3587cb9862afc1bd93a5d5 355 TIGRFAM TIGR00094 tRNA_TruD_broad: tRNA pseudouridine synthase, TruD family 10 347 6.9E-69 T 11-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 YH65_05780 c05828e07b3587cb9862afc1bd93a5d5 355 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 186 347 2.5E-11 T 11-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 YH65_05780 c05828e07b3587cb9862afc1bd93a5d5 355 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 17 178 7.4E-45 T 11-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 YH65_05780 c05828e07b3587cb9862afc1bd93a5d5 355 Gene3D G3DSA:3.30.2340.10 162 313 1.9E-78 T 11-10-2018 YH65_05780 c05828e07b3587cb9862afc1bd93a5d5 355 SUPERFAMILY SSF55120 12 350 9.93E-82 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 YH65_05780 c05828e07b3587cb9862afc1bd93a5d5 355 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 1 355 26.417 T 11-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 YH65_07525 9ab2cedfd8e7652a25c31c81cf43875d 220 Pfam PF03734 L,D-transpeptidase catalytic domain 68 153 1.1E-5 T 11-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 YH65_07525 9ab2cedfd8e7652a25c31c81cf43875d 220 SUPERFAMILY SSF141523 33 151 1.15E-11 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like YH65_04455 758983295a9403aa42987235c4f23a55 123 SUPERFAMILY SSF54197 21 121 1.25E-22 T 11-10-2018 IPR036265 HIT-like superfamily YH65_04455 758983295a9403aa42987235c4f23a55 123 Gene3D G3DSA:3.30.428.10 3 122 8.8E-23 T 11-10-2018 IPR036265 HIT-like superfamily YH65_04455 758983295a9403aa42987235c4f23a55 123 PIRSF PIRSF000714 1 121 9.1E-34 T 11-10-2018 IPR026026 Histidine triad hydrolase, Hint-type YH65_07025 79e0f97ce59f73819e4ebcd9be37c64a 84 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 2 62 2.0E-6 T 11-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM YH65_07025 79e0f97ce59f73819e4ebcd9be37c64a 84 SUPERFAMILY SSF143120 2 67 1.83E-8 T 11-10-2018 IPR036165 YefM-like superfamily YH65_01515 975765a7e37bd54de2f451b3ff1ad7f2 463 Pfam PF07394 Protein of unknown function (DUF1501) 226 391 1.2E-10 T 11-10-2018 IPR010869 Protein of unknown function DUF1501 YH65_00700 73770a0784a5acc8668a78b0c66a29b4 425 Pfam PF13194 Domain of unknown function (DUF4010) 181 392 1.0E-62 T 11-10-2018 IPR025105 Domain of unknown function DUF4010 YH65_00700 73770a0784a5acc8668a78b0c66a29b4 425 Pfam PF02308 MgtC family 9 133 5.6E-16 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 YH65_05010 44af3a96d261cf0c56ef1305bf77428e 137 Pfam PF03190 Protein of unknown function, DUF255 33 83 1.5E-4 T 11-10-2018 IPR004879 Domain of unknown function DUF255 YH65_05010 44af3a96d261cf0c56ef1305bf77428e 137 Gene3D G3DSA:3.40.30.10 19 135 3.9E-13 T 11-10-2018 YH65_05010 44af3a96d261cf0c56ef1305bf77428e 137 SUPERFAMILY SSF52833 26 134 1.17E-13 T 11-10-2018 IPR036249 Thioredoxin-like superfamily YH65_00535 fcb19d516ec900418bd564bf7fe2f8fd 233 Gene3D G3DSA:3.40.470.10 1 220 4.6E-25 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 YH65_00535 fcb19d516ec900418bd564bf7fe2f8fd 233 SUPERFAMILY SSF52141 3 219 8.94E-28 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 YH65_00535 fcb19d516ec900418bd564bf7fe2f8fd 233 Pfam PF03167 Uracil DNA glycosylase superfamily 47 193 4.1E-8 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 YH65_08215 27bad2d63600d846d6e843bee3d0c1ff 525 ProSitePatterns PS00786 5'-nucleotidase signature 2. 110 121 - T 11-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 YH65_08215 27bad2d63600d846d6e843bee3d0c1ff 525 Gene3D G3DSA:3.60.21.10 26 315 8.1E-67 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like YH65_08215 27bad2d63600d846d6e843bee3d0c1ff 525 SUPERFAMILY SSF55816 316 518 1.83E-36 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 YH65_08215 27bad2d63600d846d6e843bee3d0c1ff 525 Pfam PF02872 5'-nucleotidase, C-terminal domain 317 485 8.8E-34 T 11-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 YH65_08215 27bad2d63600d846d6e843bee3d0c1ff 525 SUPERFAMILY SSF56300 27 309 6.27E-61 T 11-10-2018 YH65_08215 27bad2d63600d846d6e843bee3d0c1ff 525 PRINTS PR01607 Apyrase family signature 206 223 2.4E-16 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 YH65_08215 27bad2d63600d846d6e843bee3d0c1ff 525 PRINTS PR01607 Apyrase family signature 253 273 2.4E-16 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 YH65_08215 27bad2d63600d846d6e843bee3d0c1ff 525 PRINTS PR01607 Apyrase family signature 225 248 2.4E-16 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 YH65_08215 27bad2d63600d846d6e843bee3d0c1ff 525 PRINTS PR01607 Apyrase family signature 458 477 2.4E-16 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 YH65_08215 27bad2d63600d846d6e843bee3d0c1ff 525 PRINTS PR01607 Apyrase family signature 372 395 2.4E-16 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 YH65_08215 27bad2d63600d846d6e843bee3d0c1ff 525 Gene3D G3DSA:3.90.780.10 316 525 9.4E-36 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 YH65_08215 27bad2d63600d846d6e843bee3d0c1ff 525 Pfam PF00149 Calcineurin-like phosphoesterase 29 243 6.6E-9 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 YH65_09395 9fc8aaa2ceedebe38996a5f521b4f052 263 Pfam PF13263 PHP-associated 212 235 2.6E-5 T 11-10-2018 YH65_09395 9fc8aaa2ceedebe38996a5f521b4f052 263 Pfam PF02811 PHP domain 8 193 3.2E-17 T 11-10-2018 IPR004013 PHP domain GO:0003824 YH65_09395 9fc8aaa2ceedebe38996a5f521b4f052 263 Gene3D G3DSA:3.20.20.140 7 262 1.0E-79 T 11-10-2018 YH65_09395 9fc8aaa2ceedebe38996a5f521b4f052 263 SUPERFAMILY SSF89550 6 260 6.67E-53 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 YH65_09395 9fc8aaa2ceedebe38996a5f521b4f052 263 TIGRFAM TIGR01856 hisJ_fam: histidinol phosphate phosphatase, HisJ family 7 239 2.3E-54 T 11-10-2018 IPR010140 Histidinol phosphate phosphatase, HisJ GO:0000105|GO:0004401 KEGG: 00340+3.1.3.15 YH65_03045 0839c56275e9ad86b554cc6dcd4d334c 305 Gene3D G3DSA:3.40.50.1100 5 291 2.5E-22 T 11-10-2018 YH65_03045 0839c56275e9ad86b554cc6dcd4d334c 305 SUPERFAMILY SSF53686 4 301 1.02E-45 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme YH65_03045 0839c56275e9ad86b554cc6dcd4d334c 305 Gene3D G3DSA:3.40.50.1100 35 129 2.5E-22 T 11-10-2018 YH65_03045 0839c56275e9ad86b554cc6dcd4d334c 305 PIRSF PIRSF006278 2 304 1.1E-20 T 11-10-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase YH65_07405 9f3c3845361f691d5d379c5e892dc47a 113 SUPERFAMILY SSF51182 6 96 1.08E-12 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily YH65_07405 9f3c3845361f691d5d379c5e892dc47a 113 Gene3D G3DSA:2.60.120.10 4 103 2.7E-17 T 11-10-2018 IPR014710 RmlC-like jelly roll fold YH65_00435 249797cb8331d26ae8e71ba64641fa2e 122 Gene3D G3DSA:3.40.250.10 11 121 1.6E-25 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily YH65_00435 249797cb8331d26ae8e71ba64641fa2e 122 SMART SM00450 23 119 8.8E-18 T 11-10-2018 IPR001763 Rhodanese-like domain YH65_00435 249797cb8331d26ae8e71ba64641fa2e 122 Pfam PF00581 Rhodanese-like domain 23 102 2.1E-14 T 11-10-2018 IPR001763 Rhodanese-like domain YH65_00435 249797cb8331d26ae8e71ba64641fa2e 122 SUPERFAMILY SSF52821 5 121 2.75E-28 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily YH65_06915 03d305bcc4b2d042ad7a96b20c54392f 191 Gene3D G3DSA:3.40.50.300 1 191 1.4E-43 T 11-10-2018 YH65_06915 03d305bcc4b2d042ad7a96b20c54392f 191 SUPERFAMILY SSF52540 1 189 5.33E-38 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_06915 03d305bcc4b2d042ad7a96b20c54392f 191 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 1 185 2.2E-36 T 11-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 YH65_06915 03d305bcc4b2d042ad7a96b20c54392f 191 Hamap MF_00165 Thymidylate kinase [tmk]. 1 189 19.691 T 11-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 YH65_06915 03d305bcc4b2d042ad7a96b20c54392f 191 Pfam PF02223 Thymidylate kinase 5 185 3.3E-32 T 11-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 YH65_04535 428a5d29ebd61adae65c7bb1a5399f29 471 Pfam PF12146 Serine aminopeptidase, S33 106 311 3.5E-12 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 YH65_04535 428a5d29ebd61adae65c7bb1a5399f29 471 SUPERFAMILY SSF53474 100 330 2.1E-22 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold YH65_04535 428a5d29ebd61adae65c7bb1a5399f29 471 Gene3D G3DSA:3.40.50.1820 96 335 5.2E-27 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold YH65_03205 e1a6ee8bd7c7f7efde3df3944f2d2cf4 167 Pfam PF00430 ATP synthase B/B' CF(0) 28 141 6.1E-19 T 11-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 YH65_03205 e1a6ee8bd7c7f7efde3df3944f2d2cf4 167 Hamap MF_01398 ATP synthase subunit b [atpF]. 15 155 11.424 T 11-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 YH65_02310 cab1924ae43a381dfa2fcee16c15a0fb 275 Gene3D G3DSA:3.90.550.10 2 263 1.0E-38 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YH65_02310 cab1924ae43a381dfa2fcee16c15a0fb 275 SUPERFAMILY SSF53448 22 223 4.36E-35 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases YH65_02310 cab1924ae43a381dfa2fcee16c15a0fb 275 Pfam PF00535 Glycosyl transferase family 2 25 151 7.3E-22 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 YH65_08510 007bb3fb7aef99f1cb4d82a933b1abc4 66 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 66 1.5E-19 T 11-10-2018 IPR010035 ThiS, thiamine-biosynthesis YH65_08510 007bb3fb7aef99f1cb4d82a933b1abc4 66 Pfam PF02597 ThiS family 3 66 6.8E-15 T 11-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 YH65_08510 007bb3fb7aef99f1cb4d82a933b1abc4 66 SUPERFAMILY SSF54285 1 66 4.22E-17 T 11-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp YH65_08510 007bb3fb7aef99f1cb4d82a933b1abc4 66 Gene3D G3DSA:3.10.20.30 1 66 4.5E-19 T 11-10-2018 IPR012675 Beta-grasp domain superfamily YH65_02855 da5471567ef61f6401e56af661341f9b 259 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 143 199 3.9E-9 T 11-10-2018 IPR029095 NarX-like, N-terminal YH65_02855 da5471567ef61f6401e56af661341f9b 259 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 27 107 4.2E-13 T 11-10-2018 IPR029095 NarX-like, N-terminal YH65_06995 e9de9dd5643154b851f58cf3473ca197 256 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 30 250 5.2E-68 T 11-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase YH65_06995 e9de9dd5643154b851f58cf3473ca197 256 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 34 252 2.2E-57 T 11-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase YH65_06995 e9de9dd5643154b851f58cf3473ca197 256 SUPERFAMILY SSF64438 7 253 1.72E-67 T 11-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic YH65_06995 e9de9dd5643154b851f58cf3473ca197 256 Gene3D G3DSA:3.60.140.10 7 255 5.2E-76 T 11-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily YH65_04530 5d1ae13711dcef82d49a47b9b833826d 145 Gene3D G3DSA:1.20.120.1370 6 140 4.7E-6 T 11-10-2018 IPR038309 Rsd/AlgQ superfamily YH65_04530 5d1ae13711dcef82d49a47b9b833826d 145 Pfam PF01814 Hemerythrin HHE cation binding domain 14 142 9.2E-8 T 11-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 YH65_00075 1bff538566db3355b8b9e7a924dded7f 355 Pfam PF03601 Conserved hypothetical protein 698 14 331 1.3E-87 T 11-10-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 YH65_00075 1bff538566db3355b8b9e7a924dded7f 355 TIGRFAM TIGR00698 TIGR00698: conserved hypothetical protein 13 353 8.4E-88 T 11-10-2018 IPR004630 Uncharacterised protein family UPF0324, bacteria GO:0016021 YH65_06895 52add41a63177c79ba2e35ba1d95824e 246 Pfam PF07298 NnrU protein 58 240 9.4E-7 T 11-10-2018 IPR009915 NnrU domain YH65_06895 52add41a63177c79ba2e35ba1d95824e 246 Gene3D G3DSA:1.20.120.1630 58 245 2.0E-10 T 11-10-2018 YH65_03240 bab95f2aadb661ed3cbf7347d3318a72 128 Pfam PF02472 Biopolymer transport protein ExbD/TolR 6 127 3.7E-26 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 YH65_03240 bab95f2aadb661ed3cbf7347d3318a72 128 Gene3D G3DSA:3.30.420.270 55 125 1.3E-12 T 11-10-2018 YH65_01280 42dda00040b4f052d66a8bba326d5c14 252 Pfam PF01148 Cytidylyltransferase family 10 251 5.1E-48 T 11-10-2018 YH65_01280 42dda00040b4f052d66a8bba326d5c14 252 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 209 235 - T 11-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 YH65_01540 d29a9ef31cf2b4d1b1fbc50f3ac67020 138 SUPERFAMILY SSF54523 17 121 3.61E-14 T 11-10-2018 YH65_01540 d29a9ef31cf2b4d1b1fbc50f3ac67020 138 Pfam PF07963 Prokaryotic N-terminal methylation motif 13 36 5.1E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site YH65_01540 d29a9ef31cf2b4d1b1fbc50f3ac67020 138 Gene3D G3DSA:3.30.700.10 17 129 5.6E-15 T 11-10-2018 YH65_01540 d29a9ef31cf2b4d1b1fbc50f3ac67020 138 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 14 37 7.6E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site YH65_05530 68a70ed738277e4a639c784dbd2e51c4 441 Gene3D G3DSA:1.20.1740.10 1 433 1.7E-92 T 11-10-2018 YH65_05530 68a70ed738277e4a639c784dbd2e51c4 441 PIRSF PIRSF006060 1 440 9.3E-57 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 YH65_05530 68a70ed738277e4a639c784dbd2e51c4 441 Pfam PF13520 Amino acid permease 6 409 8.7E-33 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 YH65_06330 82da6968b1b0f073c1649ee92aa21ca9 193 Gene3D G3DSA:1.10.287.70 85 192 5.8E-10 T 11-10-2018 YH65_06330 82da6968b1b0f073c1649ee92aa21ca9 193 SUPERFAMILY SSF81324 17 188 4.19E-11 T 11-10-2018 YH65_06330 82da6968b1b0f073c1649ee92aa21ca9 193 Pfam PF07885 Ion channel 100 183 5.3E-7 T 11-10-2018 IPR013099 Potassium channel domain YH65_07310 058d0edf0cb7289f1dd735a715fe7cdc 314 SUPERFAMILY SSF81345 5 310 1.02E-63 T 11-10-2018 IPR037294 ABC transporter, BtuC-like YH65_07310 058d0edf0cb7289f1dd735a715fe7cdc 314 Gene3D G3DSA:1.10.3470.10 1 314 6.6E-77 T 11-10-2018 IPR037294 ABC transporter, BtuC-like YH65_07310 058d0edf0cb7289f1dd735a715fe7cdc 314 Pfam PF01032 FecCD transport family 12 310 1.5E-73 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 YH65_05620 46e1c6679613c990f55476cd001121e8 198 PIRSF PIRSF020606 1 197 2.1E-76 T 11-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 YH65_05620 46e1c6679613c990f55476cd001121e8 198 Pfam PF09997 Predicted membrane protein (DUF2238) 34 175 8.7E-58 T 11-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 YH65_03960 e3c41d04f0346b890533b61a7e73979e 404 Gene3D G3DSA:2.30.40.10 16 400 6.3E-144 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 YH65_03960 e3c41d04f0346b890533b61a7e73979e 404 SUPERFAMILY SSF51556 56 355 1.4E-60 T 11-10-2018 IPR032466 Metal-dependent hydrolase YH65_03960 e3c41d04f0346b890533b61a7e73979e 404 Pfam PF01979 Amidohydrolase family 53 400 1.2E-46 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 YH65_03960 e3c41d04f0346b890533b61a7e73979e 404 Gene3D G3DSA:3.20.20.140 58 357 6.3E-144 T 11-10-2018 YH65_03960 e3c41d04f0346b890533b61a7e73979e 404 SUPERFAMILY SSF51338 3 71 8.64E-9 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 YH65_03730 7837a9c6e980b69de3f9409b8b9b5ede 175 Pfam PF10788 Protein of unknown function (DUF2603) 19 158 6.1E-38 T 11-10-2018 IPR019724 Uncharacterised protein family UPF0763 YH65_03730 7837a9c6e980b69de3f9409b8b9b5ede 175 Hamap MF_02110 UPF0763 protein . 15 167 21.938 T 11-10-2018 IPR019724 Uncharacterised protein family UPF0763 YH65_07305 dcbcfbe70ed54673ab8d82ec4c01289c 231 SUPERFAMILY SSF52540 10 214 1.65E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_07305 dcbcfbe70ed54673ab8d82ec4c01289c 231 ProSitePatterns PS00211 ABC transporters family signature. 121 135 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YH65_07305 dcbcfbe70ed54673ab8d82ec4c01289c 231 SMART SM00382 21 195 1.3E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain YH65_07305 dcbcfbe70ed54673ab8d82ec4c01289c 231 Gene3D G3DSA:3.40.50.300 2 228 3.6E-42 T 11-10-2018 YH65_07305 dcbcfbe70ed54673ab8d82ec4c01289c 231 Pfam PF00005 ABC transporter 12 149 1.3E-21 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YH65_03310 07640acb69f8bff1695dd0de548bf932 269 SUPERFAMILY SSF52402 15 209 4.19E-48 T 11-10-2018 YH65_03310 07640acb69f8bff1695dd0de548bf932 269 PIRSF PIRSF004976 1 268 1.4E-61 T 11-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 YH65_03310 07640acb69f8bff1695dd0de548bf932 269 Gene3D G3DSA:3.40.50.620 6 262 3.2E-46 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YH65_03310 07640acb69f8bff1695dd0de548bf932 269 Pfam PF01171 PP-loop family 38 206 1.4E-21 T 11-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 YH65_05635 5f1c2c1a2ea462b27f8b0edfa0aacfe8 309 SUPERFAMILY SSF53335 118 252 3.11E-12 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YH65_05635 5f1c2c1a2ea462b27f8b0edfa0aacfe8 309 Pfam PF13847 Methyltransferase domain 137 249 2.5E-9 T 11-10-2018 IPR025714 Methyltransferase domain YH65_05635 5f1c2c1a2ea462b27f8b0edfa0aacfe8 309 Gene3D G3DSA:3.40.50.150 120 299 4.0E-11 T 11-10-2018 YH65_05470 d86c49a7a8654acffda095326c6c7933 166 Pfam PF16985 Domain of unknown function (DUF5086) 32 138 2.0E-20 T 11-10-2018 IPR031561 Protein of unknown function DUF5086 YH65_05470 d86c49a7a8654acffda095326c6c7933 166 Gene3D G3DSA:2.30.30.900 28 140 8.0E-40 T 11-10-2018 YH65_06655 69e31b45c1cce2907733906f786045cc 492 SUPERFAMILY SSF51905 218 350 1.02E-5 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_06655 69e31b45c1cce2907733906f786045cc 492 Gene3D G3DSA:3.50.50.60 56 415 2.2E-74 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_06655 69e31b45c1cce2907733906f786045cc 492 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 56 171 2.7E-14 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YH65_06655 69e31b45c1cce2907733906f786045cc 492 SUPERFAMILY SSF51905 56 423 2.87E-27 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_06655 69e31b45c1cce2907733906f786045cc 492 Gene3D G3DSA:3.50.50.60 169 350 2.2E-74 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily YH65_09715 37c0b187545f4d66d88e3e43077b1923 455 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 268 374 4.6E-16 T 11-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_09715 37c0b187545f4d66d88e3e43077b1923 455 Gene3D G3DSA:1.10.645.20 112 454 1.7E-72 T 11-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_09715 37c0b187545f4d66d88e3e43077b1923 455 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 12 90 2.9E-9 T 11-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_09715 37c0b187545f4d66d88e3e43077b1923 455 SUPERFAMILY SSF143243 10 126 2.75E-20 T 11-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_09715 37c0b187545f4d66d88e3e43077b1923 455 SUPERFAMILY SSF56762 122 454 1.7E-61 T 11-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_09715 37c0b187545f4d66d88e3e43077b1923 455 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 37 87 2.0E-6 T 11-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_04585 c10539635f8e20642f04fc4535dd9ee1 219 Pfam PF04143 Sulphur transport 56 195 1.5E-16 T 11-10-2018 IPR007272 Sulphur transport domain YH65_06875 317f77d43365fffe05c54e37ed0a88a6 198 Gene3D G3DSA:1.20.120.450 35 196 9.4E-14 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes YH65_06875 317f77d43365fffe05c54e37ed0a88a6 198 Pfam PF05163 DinB family 78 198 1.8E-4 T 11-10-2018 IPR007837 DNA damage-inducible protein DinB YH65_06875 317f77d43365fffe05c54e37ed0a88a6 198 SUPERFAMILY SSF109854 84 196 5.49E-7 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes YH65_06695 05aa8b3a269436c6139d6dff0ac18195 546 Pfam PF02470 MlaD protein 44 130 5.9E-11 T 11-10-2018 IPR003399 Mce/MlaD YH65_06695 05aa8b3a269436c6139d6dff0ac18195 546 Pfam PF02470 MlaD protein 297 386 2.7E-8 T 11-10-2018 IPR003399 Mce/MlaD YH65_05170 9c0ce391985ea13694c1415d874ba1ef 568 Pfam PF00501 AMP-binding enzyme 18 460 1.9E-96 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 YH65_05170 9c0ce391985ea13694c1415d874ba1ef 568 SUPERFAMILY SSF56801 9 565 2.49E-112 T 11-10-2018 YH65_05170 9c0ce391985ea13694c1415d874ba1ef 568 ProSitePatterns PS00455 Putative AMP-binding domain signature. 191 202 - T 11-10-2018 IPR020845 AMP-binding, conserved site YH65_05170 9c0ce391985ea13694c1415d874ba1ef 568 Gene3D G3DSA:3.30.300.30 458 567 8.1E-5 T 11-10-2018 YH65_02320 9267ac6370decf80b9607948967486db 471 PIRSF PIRSF016636 1 471 1.1E-117 T 11-10-2018 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB YH65_02320 9267ac6370decf80b9607948967486db 471 PIRSF PIRSF500217 1 471 2.5E-116 T 11-10-2018 IPR028362 Alginate O-acetyltransferase AlgI GO:0042121 YH65_02320 9267ac6370decf80b9607948967486db 471 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 163 386 8.1E-24 T 11-10-2018 IPR004299 Membrane bound O-acyl transferase, MBOAT YH65_02590 b04746654bb5660be8014472adedfdd2 198 Pfam PF14559 Tetratricopeptide repeat 69 132 1.2E-5 T 11-10-2018 YH65_02590 b04746654bb5660be8014472adedfdd2 198 Gene3D G3DSA:1.25.40.10 6 196 1.9E-15 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YH65_02590 b04746654bb5660be8014472adedfdd2 198 SUPERFAMILY SSF48452 51 195 1.52E-14 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 YH65_06600 ef1a1c3a37a5ea269204b6821b416fb3 84 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 7 84 6.8E-7 T 11-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family YH65_06600 ef1a1c3a37a5ea269204b6821b416fb3 84 SUPERFAMILY SSF143011 2 83 1.05E-19 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily YH65_06600 ef1a1c3a37a5ea269204b6821b416fb3 84 Gene3D G3DSA:3.30.2310.20 1 84 9.5E-19 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily YH65_00835 18133267fab453bd75282f8aed8b6190 205 Pfam PF09335 SNARE associated Golgi protein 34 161 2.3E-21 T 11-10-2018 IPR032816 SNARE associated Golgi protein YH65_10215 0f4d71668107f4cad3344e804243f665 370 Gene3D G3DSA:3.40.50.300 1 308 6.8E-8 T 11-10-2018 YH65_10215 0f4d71668107f4cad3344e804243f665 370 SUPERFAMILY SSF52540 3 194 6.28E-7 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_07450 6098cf1f29ad3bb4424ebeaa48df4c91 81 Pfam PF03547 Membrane transport protein 26 78 1.5E-8 T 11-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 YH65_05835 86d0f0dcd64b22b01865b4dffc4bfd78 128 Gene3D G3DSA:2.60.40.730 4 126 1.1E-20 T 11-10-2018 IPR036073 Desulfoferrodoxin, ferrous iron-binding domain superfamily GO:0005506|GO:0016491|GO:0055114 YH65_05835 86d0f0dcd64b22b01865b4dffc4bfd78 128 Pfam PF01880 Desulfoferrodoxin 22 119 4.2E-23 T 11-10-2018 IPR002742 Desulfoferrodoxin, ferrous iron-binding domain GO:0005506|GO:0016491|GO:0055114 YH65_05835 86d0f0dcd64b22b01865b4dffc4bfd78 128 SUPERFAMILY SSF49367 16 120 1.7E-25 T 11-10-2018 IPR036073 Desulfoferrodoxin, ferrous iron-binding domain superfamily GO:0005506|GO:0016491|GO:0055114 YH65_06500 ed801c2a5069d87bb285fe14f2a057da 254 Pfam PF02673 Bacitracin resistance protein BacA 6 249 6.3E-75 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 YH65_06500 ed801c2a5069d87bb285fe14f2a057da 254 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 254 17.401 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 YH65_04190 7fce1fc3070bafc773a35bda33175704 603 Gene3D G3DSA:3.30.70.1440 160 391 5.4E-72 T 11-10-2018 YH65_04190 7fce1fc3070bafc773a35bda33175704 603 Gene3D G3DSA:3.30.2090.10 211 309 5.4E-72 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YH65_04190 7fce1fc3070bafc773a35bda33175704 603 SUPERFAMILY SSF82693 52 150 1.36E-5 T 11-10-2018 YH65_04190 7fce1fc3070bafc773a35bda33175704 603 Gene3D G3DSA:1.20.1640.10 3 552 5.4E-72 T 11-10-2018 YH65_04190 7fce1fc3070bafc773a35bda33175704 603 Gene3D G3DSA:3.30.70.1430 50 159 5.4E-72 T 11-10-2018 YH65_04190 7fce1fc3070bafc773a35bda33175704 603 Pfam PF00873 AcrB/AcrD/AcrF family 377 552 5.1E-21 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_04190 7fce1fc3070bafc773a35bda33175704 603 Pfam PF00873 AcrB/AcrD/AcrF family 15 328 2.4E-22 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 YH65_04190 7fce1fc3070bafc773a35bda33175704 603 SUPERFAMILY SSF82866 372 553 5.1E-33 T 11-10-2018 YH65_07045 2e96903f73270f13f324f31818886814 101 SUPERFAMILY SSF143120 10 79 3.79E-8 T 11-10-2018 IPR036165 YefM-like superfamily YH65_07045 2e96903f73270f13f324f31818886814 101 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 36 59 9.5E-6 T 11-10-2018 YH65_07045 2e96903f73270f13f324f31818886814 101 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 33 63 8.2E-6 T 11-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM YH65_03470 1988ba980ecac808f7c802bb1a6e95b4 249 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 97 103 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 YH65_03470 1988ba980ecac808f7c802bb1a6e95b4 249 SUPERFAMILY SSF53335 9 173 6.87E-29 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YH65_03470 1988ba980ecac808f7c802bb1a6e95b4 249 Gene3D G3DSA:3.40.50.150 1 229 2.0E-52 T 11-10-2018 YH65_03470 1988ba980ecac808f7c802bb1a6e95b4 249 Pfam PF05175 Methyltransferase small domain 28 115 2.6E-15 T 11-10-2018 IPR007848 Methyltransferase small domain GO:0008168 YH65_05100 9c8dfd94df246a658ff304c77ef8bf65 214 Pfam PF03006 Haemolysin-III related 9 206 9.1E-33 T 11-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 YH65_05100 9c8dfd94df246a658ff304c77ef8bf65 214 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 12 213 4.0E-58 T 11-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 YH65_06275 cc9a9233710572743675e4c107196c17 167 Pfam PF03773 Predicted permease 38 158 8.0E-11 T 11-10-2018 IPR005524 Predicted permease DUF318 YH65_05330 bce37753b87f07467bf502cd73cf042d 146 Pfam PF07681 DoxX 20 100 8.6E-16 T 11-10-2018 IPR032808 DoxX family YH65_04985 3812f7436625a5480692dccc192f3fb3 156 Gene3D G3DSA:3.30.310.70 24 153 7.6E-15 T 11-10-2018 IPR035923 TT1751-like domain superfamily YH65_04985 3812f7436625a5480692dccc192f3fb3 156 SUPERFAMILY SSF103247 30 150 2.49E-28 T 11-10-2018 IPR035923 TT1751-like domain superfamily YH65_04985 3812f7436625a5480692dccc192f3fb3 156 Pfam PF03625 Domain of unknown function DUF302 59 121 1.2E-17 T 11-10-2018 IPR005180 Domain of unknown function DUF302 YH65_06930 73192f84e3ed1ff738abf276bddad575 303 Pfam PF02470 MlaD protein 40 115 4.1E-11 T 11-10-2018 IPR003399 Mce/MlaD YH65_10525 e751e2cb946c01961081b24cb8c04ce5 219 TIGRFAM TIGR00608 radc: DNA repair protein RadC 12 219 3.1E-59 T 11-10-2018 IPR001405 Uncharacterised protein family UPF0758 YH65_10525 e751e2cb946c01961081b24cb8c04ce5 219 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 168 173 - T 11-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site YH65_10525 e751e2cb946c01961081b24cb8c04ce5 219 Pfam PF04002 RadC-like JAB domain 101 217 3.1E-40 T 11-10-2018 IPR025657 RadC-like JAB domain YH65_10525 e751e2cb946c01961081b24cb8c04ce5 219 Gene3D G3DSA:3.40.140.10 95 219 5.3E-43 T 11-10-2018 YH65_04785 20b88c254d1f958ed52679bd86afa424 126 Gene3D G3DSA:1.10.490.10 1 125 6.4E-34 T 11-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 YH65_04785 20b88c254d1f958ed52679bd86afa424 126 SUPERFAMILY SSF46458 7 111 3.36E-18 T 11-10-2018 IPR009050 Globin-like superfamily YH65_02080 7bad220fbfcbc21fa6d18b53d63584fc 83 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YH65_02080 7bad220fbfcbc21fa6d18b53d63584fc 83 Pfam PF00037 4Fe-4S binding domain 5 25 3.7E-6 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YH65_02080 7bad220fbfcbc21fa6d18b53d63584fc 83 Gene3D G3DSA:3.30.70.20 2 81 3.8E-31 T 11-10-2018 YH65_02080 7bad220fbfcbc21fa6d18b53d63584fc 83 SUPERFAMILY SSF54862 5 76 1.44E-18 T 11-10-2018 YH65_08725 1cd3efc2d4b3befbf6f2fdd033196352 159 TIGRFAM TIGR04488 SoxY_true_GGCGG: thiosulfate oxidation carrier protein SoxY 2 159 5.8E-48 T 11-10-2018 IPR016568 Sulphur oxidation, SoxY YH65_08725 1cd3efc2d4b3befbf6f2fdd033196352 159 PIRSF PIRSF010312 1 159 2.3E-44 T 11-10-2018 IPR016568 Sulphur oxidation, SoxY YH65_08725 1cd3efc2d4b3befbf6f2fdd033196352 159 Pfam PF13501 Sulfur oxidation protein SoxY 49 158 2.6E-35 T 11-10-2018 IPR032711 Ig-like SoxY domain YH65_08725 1cd3efc2d4b3befbf6f2fdd033196352 159 Gene3D G3DSA:2.60.40.2470 27 159 9.2E-37 T 11-10-2018 IPR038162 Ig-like SoxY domain superfamily YH65_10625 503773a4257ca4e2954f83a7f334e070 61 ProSitePatterns PS00527 Ribosomal protein S14 signature. 23 45 - T 11-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 YH65_10625 503773a4257ca4e2954f83a7f334e070 61 SUPERFAMILY SSF57716 3 61 9.98E-21 T 11-10-2018 YH65_10625 503773a4257ca4e2954f83a7f334e070 61 Hamap MF_01364_B 30S ribosomal protein S14 type Z [rpsZ]. 1 61 25.076 T 11-10-2018 IPR023053 Ribosomal protein S14, type Z YH65_10625 503773a4257ca4e2954f83a7f334e070 61 Pfam PF00253 Ribosomal protein S14p/S29e 10 60 1.5E-22 T 11-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YH65_10625 503773a4257ca4e2954f83a7f334e070 61 Gene3D G3DSA:4.10.830.10 1 61 1.0E-29 T 11-10-2018 YH65_08020 9c9a806c5c66d7fc0b38712c9a3fb61b 159 Pfam PF13664 Domain of unknown function (DUF4149) 14 120 5.4E-13 T 11-10-2018 IPR025423 Domain of unknown function DUF4149 YH65_06980 6d96bb7a4b9648c34f8ca56b887db5de 111 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 6 96 3.8E-13 T 11-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family YH65_06980 6d96bb7a4b9648c34f8ca56b887db5de 111 Gene3D G3DSA:3.30.2310.20 1 101 5.7E-20 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily YH65_05910 6adcce48dd4b2c3faa4a6a0c1f231a2a 194 Pfam PF03729 Short repeat of unknown function (DUF308) 28 96 2.1E-7 T 11-10-2018 IPR005325 Protein of unknown function DUF308, membrane YH65_05910 6adcce48dd4b2c3faa4a6a0c1f231a2a 194 Pfam PF03729 Short repeat of unknown function (DUF308) 84 152 8.3E-6 T 11-10-2018 IPR005325 Protein of unknown function DUF308, membrane YH65_00620 e3249615f94bf5c0110d8393ef1a6b92 207 ProDom PD032436 LIPOPROTEIN UNCHARACTERIZED PROBABLE CJ0457C SIMILAR TRANSFERASE BACTERIA PRECURSOR SIGNAL CC0304 9 130 4.0E-26 T 11-10-2018 IPR007172 Domain of unknown function DUF374 YH65_00620 e3249615f94bf5c0110d8393ef1a6b92 207 Pfam PF04028 Domain of unknown function (DUF374) 63 129 2.2E-22 T 11-10-2018 IPR007172 Domain of unknown function DUF374 YH65_05075 e9fcf2d6d5afc17c32d1884f76e44b8e 473 Pfam PF13598 Domain of unknown function (DUF4139) 162 467 3.0E-32 T 11-10-2018 IPR037291 Domain of unknown function DUF4139 YH65_10035 afc5b8ff826f260bd7bc0c8ce1772f9c 97 SUPERFAMILY SSF51182 21 95 2.74E-14 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily YH65_10035 afc5b8ff826f260bd7bc0c8ce1772f9c 97 Gene3D G3DSA:2.60.120.10 12 97 1.5E-25 T 11-10-2018 IPR014710 RmlC-like jelly roll fold YH65_10035 afc5b8ff826f260bd7bc0c8ce1772f9c 97 Pfam PF07883 Cupin domain 43 87 1.2E-9 T 11-10-2018 IPR013096 Cupin 2, conserved barrel YH65_09455 0e9fbf66d1f8c88766248a7828eec6fa 675 Gene3D G3DSA:3.90.1310.30 43 245 4.4E-19 T 11-10-2018 YH65_09455 0e9fbf66d1f8c88766248a7828eec6fa 675 Gene3D G3DSA:3.30.450.330 252 581 6.7E-71 T 11-10-2018 YH65_09455 0e9fbf66d1f8c88766248a7828eec6fa 675 Pfam PF00905 Penicillin binding protein transpeptidase domain 273 580 8.4E-54 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 YH65_09455 0e9fbf66d1f8c88766248a7828eec6fa 675 Gene3D G3DSA:3.40.710.10 299 501 6.7E-71 T 11-10-2018 YH65_09455 0e9fbf66d1f8c88766248a7828eec6fa 675 SUPERFAMILY SSF56519 50 245 2.88E-21 T 11-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 YH65_09455 0e9fbf66d1f8c88766248a7828eec6fa 675 Pfam PF03717 Penicillin-binding Protein dimerisation domain 49 213 4.6E-13 T 11-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 YH65_09455 0e9fbf66d1f8c88766248a7828eec6fa 675 SUPERFAMILY SSF56601 267 586 4.08E-63 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like YH65_09990 50e4b1fd8e8a16622765d130980cc4dc 245 Pfam PF01925 Sulfite exporter TauE/SafE 10 239 6.8E-38 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 YH65_06960 e16b70593196c39cfc73f6667dab6651 743 Gene3D G3DSA:3.40.1090.10 41 232 4.0E-5 T 11-10-2018 YH65_06960 e16b70593196c39cfc73f6667dab6651 743 Gene3D G3DSA:3.40.1090.20 246 312 1.2E-5 T 11-10-2018 YH65_06960 e16b70593196c39cfc73f6667dab6651 743 SUPERFAMILY SSF52151 53 312 7.85E-16 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase YH65_06960 e16b70593196c39cfc73f6667dab6651 743 Pfam PF01734 Patatin-like phospholipase 54 294 1.1E-22 T 11-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 YH65_04030 dd5f21487a58ace37f16381e493d8b70 271 Pfam PF02146 Sir2 family 24 186 3.8E-21 T 11-10-2018 IPR003000 Sirtuin family GO:0070403 YH65_04030 dd5f21487a58ace37f16381e493d8b70 271 SUPERFAMILY SSF52467 2 257 1.07E-64 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily YH65_04030 dd5f21487a58ace37f16381e493d8b70 271 Gene3D G3DSA:3.30.1600.10 33 187 3.6E-39 T 11-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily YH65_04030 dd5f21487a58ace37f16381e493d8b70 271 Gene3D G3DSA:3.40.50.1220 16 251 3.6E-39 T 11-10-2018 YH65_05055 6c49427fc1ce224f997277c3cfe98f73 214 Pfam PF02163 Peptidase family M50 126 190 3.8E-7 T 11-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 YH65_08370 469b6f92f9ef258ad6f60dfc1ad6e6e5 470 SUPERFAMILY SSF56954 4 465 9.29E-67 T 11-10-2018 YH65_08370 469b6f92f9ef258ad6f60dfc1ad6e6e5 470 Pfam PF02321 Outer membrane efflux protein 289 465 1.2E-30 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 YH65_08370 469b6f92f9ef258ad6f60dfc1ad6e6e5 470 Pfam PF02321 Outer membrane efflux protein 23 264 5.1E-13 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 YH65_00260 aafbe1544fa09989067528545969c03c 125 SUPERFAMILY SSF52833 10 111 8.83E-20 T 11-10-2018 IPR036249 Thioredoxin-like superfamily YH65_00260 aafbe1544fa09989067528545969c03c 125 Gene3D G3DSA:3.40.30.10 8 114 7.1E-24 T 11-10-2018 YH65_09625 c1fe591411c25d26b363ff032515c3e2 299 Pfam PF01734 Patatin-like phospholipase 9 167 8.0E-23 T 11-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 YH65_09625 c1fe591411c25d26b363ff032515c3e2 299 Gene3D G3DSA:3.40.1090.10 1 103 6.2E-22 T 11-10-2018 YH65_09625 c1fe591411c25d26b363ff032515c3e2 299 Gene3D G3DSA:3.40.1090.10 104 230 4.2E-14 T 11-10-2018 YH65_09625 c1fe591411c25d26b363ff032515c3e2 299 SUPERFAMILY SSF52151 4 295 3.4E-52 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase YH65_08235 39161626b551d4e55834af455b9f6e72 96 Gene3D G3DSA:1.10.3350.10 18 96 4.2E-19 T 11-10-2018 IPR023126 HP0242-like superfamily YH65_08235 39161626b551d4e55834af455b9f6e72 96 Pfam PF09442 Domain of unknown function (DUF2018) 17 96 3.4E-22 T 11-10-2018 IPR018563 Protein of unknown function DUF2018 YH65_08235 39161626b551d4e55834af455b9f6e72 96 SUPERFAMILY SSF158752 11 94 1.11E-19 T 11-10-2018 IPR023126 HP0242-like superfamily YH65_04395 c4b6695dde8c8636c2d305fb1bba4e5a 604 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 33 369 3.3E-12 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 YH65_04395 c4b6695dde8c8636c2d305fb1bba4e5a 604 SUPERFAMILY SSF52540 1 372 6.63E-15 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_04395 c4b6695dde8c8636c2d305fb1bba4e5a 604 Gene3D G3DSA:3.40.50.300 1 384 4.0E-21 T 11-10-2018 YH65_01785 c6ac4222b46cdae22167f92ff7f24008 369 Pfam PF10442 FIST C domain 248 343 9.3E-7 T 11-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 YH65_01785 c6ac4222b46cdae22167f92ff7f24008 369 Pfam PF08495 FIST N domain 25 207 2.2E-15 T 11-10-2018 IPR013702 FIST domain, N-terminal YH65_09720 344a9fd5a25a743198a50d5eba108f14 470 Pfam PF00361 Proton-conducting membrane transporter 113 394 2.0E-24 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 YH65_09450 3c280a4cb9941e7aa0b4945ff9b466a2 394 Pfam PF01098 Cell cycle protein 7 384 6.2E-85 T 11-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 YH65_09810 0ced9bd9be5e6ef6235dcbaf9d6dd5bb 223 SUPERFAMILY SSF46626 104 206 9.6E-12 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_09810 0ced9bd9be5e6ef6235dcbaf9d6dd5bb 223 Pfam PF00034 Cytochrome c 109 196 6.4E-6 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YH65_09810 0ced9bd9be5e6ef6235dcbaf9d6dd5bb 223 Gene3D G3DSA:1.10.760.10 79 209 6.6E-21 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_03655 c57ea6f51a7e84e9d9f23fbb1d944b4f 244 Gene3D G3DSA:1.10.10.60 159 243 2.6E-10 T 11-10-2018 YH65_03655 c57ea6f51a7e84e9d9f23fbb1d944b4f 244 Pfam PF02954 Bacterial regulatory protein, Fis family 202 240 9.3E-6 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 YH65_03655 c57ea6f51a7e84e9d9f23fbb1d944b4f 244 SUPERFAMILY SSF46689 188 244 3.99E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 YH65_10500 f78912f77a46c7108c9e9e4f7e694973 277 SUPERFAMILY SSF69796 8 258 1.24E-26 T 11-10-2018 IPR036098 Thymidylate synthase ThyX superfamily GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 YH65_10500 f78912f77a46c7108c9e9e4f7e694973 277 Pfam PF02511 Thymidylate synthase complementing protein 13 259 1.5E-45 T 11-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 YH65_06700 6628e26c5a74922a8493e2851b4cb711 208 Pfam PF04403 Paraquat-inducible protein A 44 197 1.2E-47 T 11-10-2018 IPR007498 Intermembrane transport protein PqiA-like YH65_10365 a4fc40bf2d8b2aac334fb95ac16f4a46 326 Pfam PF13795 HupE / UreJ protein 142 293 2.8E-46 T 11-10-2018 IPR032809 Putative HupE/UreJ protein YH65_04795 2b8ffa703c6e0c09ee4b992cd9eb4f90 152 Gene3D G3DSA:3.90.1010.10 3 131 5.2E-30 T 11-10-2018 YH65_04795 2b8ffa703c6e0c09ee4b992cd9eb4f90 152 Pfam PF01592 NifU-like N terminal domain 5 126 1.0E-20 T 11-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 YH65_04795 2b8ffa703c6e0c09ee4b992cd9eb4f90 152 SUPERFAMILY SSF82649 6 127 1.99E-24 T 11-10-2018 YH65_10825 26ec1bf5588103ecf310255d08e8ea32 406 Pfam PF00589 Phage integrase family 255 383 3.2E-14 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 YH65_10825 26ec1bf5588103ecf310255d08e8ea32 406 Gene3D G3DSA:1.10.443.10 228 398 1.3E-22 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 YH65_10825 26ec1bf5588103ecf310255d08e8ea32 406 SUPERFAMILY SSF56349 150 384 6.47E-41 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 YH65_10825 26ec1bf5588103ecf310255d08e8ea32 406 Gene3D G3DSA:1.10.150.130 87 224 4.8E-14 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal YH65_09870 bc9dd6ac06d4ab34fb538ba65d767499 260 SUPERFAMILY SSF51197 2 247 4.21E-54 T 11-10-2018 YH65_09870 bc9dd6ac06d4ab34fb538ba65d767499 260 Gene3D G3DSA:2.60.120.620 1 257 1.5E-54 T 11-10-2018 YH65_09870 bc9dd6ac06d4ab34fb538ba65d767499 260 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 11 231 6.0E-36 T 11-10-2018 IPR008775 Phytanoyl-CoA dioxygenase YH65_07645 2a56567a5a04447c7b529a2b45a5cada 128 Pfam PF03625 Domain of unknown function DUF302 36 93 6.3E-12 T 11-10-2018 IPR005180 Domain of unknown function DUF302 YH65_07645 2a56567a5a04447c7b529a2b45a5cada 128 Gene3D G3DSA:3.30.310.70 1 126 1.0E-23 T 11-10-2018 IPR035923 TT1751-like domain superfamily YH65_07645 2a56567a5a04447c7b529a2b45a5cada 128 SUPERFAMILY SSF103247 1 125 2.75E-20 T 11-10-2018 IPR035923 TT1751-like domain superfamily YH65_09635 02035f667f98a9e2dd369e38004e696a 372 Pfam PF12698 ABC-2 family transporter protein 23 363 2.8E-31 T 11-10-2018 YH65_09635 02035f667f98a9e2dd369e38004e696a 372 Gene3D G3DSA:3.40.1710.10 44 148 1.6E-5 T 11-10-2018 YH65_11090 4f3ebde5a0eff50ec91c95f397b75e5f 127 Pfam PF07681 DoxX 7 85 2.5E-15 T 11-10-2018 IPR032808 DoxX family YH65_00910 b963797aa48f00dc4a9f7cb504c4d140 224 Gene3D G3DSA:3.40.50.300 1 223 1.0E-32 T 11-10-2018 YH65_00910 b963797aa48f00dc4a9f7cb504c4d140 224 Pfam PF00005 ABC transporter 22 152 6.7E-11 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YH65_00910 b963797aa48f00dc4a9f7cb504c4d140 224 SUPERFAMILY SSF52540 1 214 2.01E-34 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_09340 4d9af86b5cb98864f8a0ca3e37fa5f53 245 SUPERFAMILY SSF55120 54 242 7.36E-51 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 YH65_09340 4d9af86b5cb98864f8a0ca3e37fa5f53 245 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 91 105 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 YH65_09340 4d9af86b5cb98864f8a0ca3e37fa5f53 245 Pfam PF00849 RNA pseudouridylate synthase 89 199 1.2E-24 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 YH65_09340 4d9af86b5cb98864f8a0ca3e37fa5f53 245 Gene3D G3DSA:3.30.2350.10 49 238 2.1E-49 T 11-10-2018 YH65_10360 98212b3fe3cb8d32da25eda8209b4d00 120 SUPERFAMILY SSF46626 35 119 3.67E-12 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_10360 98212b3fe3cb8d32da25eda8209b4d00 120 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 35 116 1.0E-8 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YH65_10360 98212b3fe3cb8d32da25eda8209b4d00 120 Gene3D G3DSA:1.10.760.10 34 118 2.6E-14 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_09695 387517e5aee65eee88a4aafb475580ea 304 SUPERFAMILY SSF46689 255 303 6.27E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 YH65_09695 387517e5aee65eee88a4aafb475580ea 304 Gene3D G3DSA:1.10.10.60 200 303 1.7E-22 T 11-10-2018 YH65_09695 387517e5aee65eee88a4aafb475580ea 304 SMART SM00342 219 302 7.2E-20 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YH65_09695 387517e5aee65eee88a4aafb475580ea 304 Pfam PF12833 Helix-turn-helix domain 226 301 1.0E-17 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YH65_06965 660589c50ff7b07888293efea15065f9 184 Pfam PF09335 SNARE associated Golgi protein 24 136 6.3E-12 T 11-10-2018 IPR032816 SNARE associated Golgi protein YH65_06640 53ff14cfffd9d569d671afc97dbac6d6 205 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 15 184 3.6E-26 T 11-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 YH65_06640 53ff14cfffd9d569d671afc97dbac6d6 205 Gene3D G3DSA:3.90.850.10 6 204 2.7E-44 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 YH65_06640 53ff14cfffd9d569d671afc97dbac6d6 205 SUPERFAMILY SSF56529 6 187 5.23E-45 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 YH65_08155 0796db043363657cd9f71f363ed32a92 378 SMART SM00564 240 279 310.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat YH65_08155 0796db043363657cd9f71f363ed32a92 378 SMART SM00564 31 71 220.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat YH65_08155 0796db043363657cd9f71f363ed32a92 378 SMART SM00564 292 332 1.5 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat YH65_08155 0796db043363657cd9f71f363ed32a92 378 SMART SM00564 189 228 150.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat YH65_08155 0796db043363657cd9f71f363ed32a92 378 SUPERFAMILY SSF50998 63 357 1.02E-12 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily YH65_10245 0ac6a97c4678c36982c07cabe7bb6c1f 144 Gene3D G3DSA:2.40.128.270 29 143 4.9E-17 T 11-10-2018 IPR038670 HslJ-like superfamily YH65_10245 0ac6a97c4678c36982c07cabe7bb6c1f 144 Pfam PF03724 META domain 30 138 3.6E-21 T 11-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ YH65_04540 8787a7b042cc4eccb4e59423ae85371e 319 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 246 316 8.9E-13 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 YH65_04540 8787a7b042cc4eccb4e59423ae85371e 319 Gene3D G3DSA:3.30.1150.10 51 319 6.6E-7 T 11-10-2018 YH65_04540 8787a7b042cc4eccb4e59423ae85371e 319 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 246 316 6.1E-13 T 11-10-2018 IPR006260 TonB/TolA, C-terminal YH65_04540 8787a7b042cc4eccb4e59423ae85371e 319 SUPERFAMILY SSF74653 245 297 4.45E-8 T 11-10-2018 YH65_09805 8e05027e23b9ed7ba74e496a60b144db 481 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 18 456 8.9E-66 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YH65_09805 8e05027e23b9ed7ba74e496a60b144db 481 SUPERFAMILY SSF81442 15 474 4.19E-70 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YH65_09805 8e05027e23b9ed7ba74e496a60b144db 481 Gene3D G3DSA:1.20.210.10 1 481 1.7E-115 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 YH65_09775 a711fa1020a5e1e75297cc93928ae1a1 130 Pfam PF13899 Thioredoxin-like 16 98 1.5E-11 T 11-10-2018 YH65_09775 a711fa1020a5e1e75297cc93928ae1a1 130 SUPERFAMILY SSF52833 15 108 1.01E-8 T 11-10-2018 IPR036249 Thioredoxin-like superfamily YH65_09775 a711fa1020a5e1e75297cc93928ae1a1 130 Gene3D G3DSA:3.40.30.10 11 122 1.8E-8 T 11-10-2018 YH65_06370 ba8995ab278e490a4be3d79044590605 246 Pfam PF01925 Sulfite exporter TauE/SafE 8 239 3.0E-41 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 YH65_02910 56eba70c2817ee63465724f24c6608a2 431 Gene3D G3DSA:3.40.50.150 143 418 3.0E-91 T 11-10-2018 YH65_02910 56eba70c2817ee63465724f24c6608a2 431 Pfam PF02353 Mycolic acid cyclopropane synthetase 137 410 6.6E-87 T 11-10-2018 YH65_02910 56eba70c2817ee63465724f24c6608a2 431 PIRSF PIRSF003085 5 430 6.4E-115 T 11-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 YH65_02910 56eba70c2817ee63465724f24c6608a2 431 SUPERFAMILY SSF53335 146 415 9.97E-69 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YH65_01145 ce652aa527272fadbacdbf0d45f7904f 245 Pfam PF03883 Peroxide stress protein YaaA 1 228 1.7E-38 T 11-10-2018 IPR005583 Peroxide stress protein YaaA YH65_09885 536f24b8ed3160488bc25dcb0284cf7e 324 Pfam PF06189 5'-nucleotidase 45 309 3.9E-101 T 11-10-2018 IPR010394 5-nucleotidase GO:0000166|GO:0000287|GO:0005737|GO:0008253|GO:0009117 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821|Reactome: R-HSA-74259 YH65_10875 1fe516961ce65492736a708d90151277 309 Pfam PF00849 RNA pseudouridylate synthase 78 226 1.3E-26 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 YH65_10875 1fe516961ce65492736a708d90151277 309 SUPERFAMILY SSF55120 69 279 6.3E-48 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 YH65_10875 1fe516961ce65492736a708d90151277 309 Gene3D G3DSA:3.30.2350.10 72 297 6.3E-51 T 11-10-2018 YH65_08505 db2727e12f2fb72973cf67b9d6d9a45d 270 SUPERFAMILY SSF110399 11 251 6.54E-87 T 11-10-2018 YH65_08505 db2727e12f2fb72973cf67b9d6d9a45d 270 Gene3D G3DSA:3.20.20.70 9 270 3.7E-109 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 YH65_08505 db2727e12f2fb72973cf67b9d6d9a45d 270 Pfam PF05690 Thiazole biosynthesis protein ThiG 13 259 2.8E-108 T 11-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 YH65_08505 db2727e12f2fb72973cf67b9d6d9a45d 270 Hamap MF_00443 Thiazole synthase [thiG]. 11 265 42.863 T 11-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 YH65_05915 5167c83d25b145dcb8e1f2f44f255c31 328 Pfam PF10938 YfdX protein 53 189 1.7E-32 T 11-10-2018 IPR021236 Uncharacterised protein family YfdX YH65_01850 196e1314b25ba382948185d14baa503d 237 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 237 85.535 T 11-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 YH65_01850 196e1314b25ba382948185d14baa503d 237 SUPERFAMILY SSF55729 4 229 1.59E-87 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase YH65_01850 196e1314b25ba382948185d14baa503d 237 Gene3D G3DSA:3.40.630.70 58 233 2.7E-62 T 11-10-2018 YH65_01850 196e1314b25ba382948185d14baa503d 237 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 32 201 8.5E-71 T 11-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 YH65_01850 196e1314b25ba382948185d14baa503d 237 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 35 215 2.0E-59 T 11-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 YH65_01850 196e1314b25ba382948185d14baa503d 237 Gene3D G3DSA:2.30.210.20 1 57 1.3E-23 T 11-10-2018 YH65_01660 271e2dded694cb448127266eef215f09 538 Gene3D G3DSA:3.40.50.300 1 247 1.2E-10 T 11-10-2018 YH65_01660 271e2dded694cb448127266eef215f09 538 Pfam PF10088 Uncharacterised protein conserved in bacteria (DUF2326) 408 538 3.9E-23 T 11-10-2018 IPR018760 Protein of unknown function DUF2326 YH65_10235 ab4e9ea0d04bdb5b023d4052a63bcf6f 222 SUPERFAMILY SSF52540 3 128 2.37E-8 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_10235 ab4e9ea0d04bdb5b023d4052a63bcf6f 222 Pfam PF03567 Sulfotransferase family 3 165 3.1E-7 T 11-10-2018 IPR005331 Sulfotransferase GO:0008146|GO:0016021 YH65_10235 ab4e9ea0d04bdb5b023d4052a63bcf6f 222 Gene3D G3DSA:3.40.50.300 42 215 2.1E-7 T 11-10-2018 YH65_09510 4be3175a3e2593aac0d989a35d989bbf 160 Pfam PF04238 Protein of unknown function (DUF420) 18 157 2.7E-18 T 11-10-2018 IPR007352 Protein of unknown function DUF420 YH65_03590 be0ec6124742540037bb0acf32ebba07 270 SMART SM00382 41 179 1.1E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain YH65_03590 be0ec6124742540037bb0acf32ebba07 270 SUPERFAMILY SSF52540 29 258 8.77E-22 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_03590 be0ec6124742540037bb0acf32ebba07 270 Gene3D G3DSA:3.40.50.300 25 180 2.4E-11 T 11-10-2018 YH65_03590 be0ec6124742540037bb0acf32ebba07 270 Pfam PF13401 AAA domain 43 154 3.6E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain YH65_06075 afe9d655935b02ff30996238875a4db7 425 Pfam PF00188 Cysteine-rich secretory protein family 53 167 7.8E-11 T 11-10-2018 IPR014044 CAP domain YH65_06075 afe9d655935b02ff30996238875a4db7 425 Gene3D G3DSA:3.40.33.10 18 173 9.9E-20 T 11-10-2018 IPR035940 CAP superfamily YH65_06075 afe9d655935b02ff30996238875a4db7 425 SUPERFAMILY SSF55797 48 167 8.89E-9 T 11-10-2018 IPR035940 CAP superfamily YH65_01500 6dbfb93483c518a46787780d301617a2 365 Pfam PF05159 Capsule polysaccharide biosynthesis protein 73 310 1.6E-40 T 11-10-2018 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 YH65_04295 debc341c5343f92d5d6e9590ece43f0a 670 SUPERFAMILY SSF52151 20 637 2.27E-31 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase YH65_04295 debc341c5343f92d5d6e9590ece43f0a 670 Pfam PF01734 Patatin-like phospholipase 72 162 7.8E-7 T 11-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 YH65_04295 debc341c5343f92d5d6e9590ece43f0a 670 Gene3D G3DSA:3.40.1090.10 15 158 1.0E-11 T 11-10-2018 YH65_02240 2f65bbc9e58de4cdc61d6449d67211e9 402 Pfam PF04932 O-Antigen ligase 187 338 1.0E-17 T 11-10-2018 IPR007016 O-antigen ligase-related YH65_03245 c30bb04752d65a7bb2b75c6544844e5b 258 Pfam PF13103 TonB C terminal 174 254 4.7E-12 T 11-10-2018 YH65_02300 7018417c3571560e1a5fce7ea3d1c29a 181 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 125 157 1.2E-4 T 11-10-2018 IPR001451 Hexapeptide repeat YH65_02300 7018417c3571560e1a5fce7ea3d1c29a 181 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 133 161 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 YH65_02300 7018417c3571560e1a5fce7ea3d1c29a 181 SUPERFAMILY SSF51161 21 179 3.6E-40 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily YH65_02300 7018417c3571560e1a5fce7ea3d1c29a 181 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 72 101 0.0011 T 11-10-2018 IPR001451 Hexapeptide repeat YH65_02300 7018417c3571560e1a5fce7ea3d1c29a 181 Gene3D G3DSA:2.160.10.10 22 180 3.6E-37 T 11-10-2018 YH65_01270 0fa9fca8d3b671a9f4ca577bad4f868a 179 Pfam PF06821 Serine hydrolase 5 174 1.4E-31 T 11-10-2018 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 YH65_01270 0fa9fca8d3b671a9f4ca577bad4f868a 179 Gene3D G3DSA:3.40.50.1820 1 178 1.3E-31 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold YH65_01270 0fa9fca8d3b671a9f4ca577bad4f868a 179 SUPERFAMILY SSF53474 4 170 4.73E-20 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold YH65_10550 afdf5e41f32a0f6a4490215a377b4f0f 359 SUPERFAMILY SSF52540 22 156 3.75E-7 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YH65_04800 f71d0bdb4a3c4cb8d8d4eb78d73fb87f 277 SUPERFAMILY SSF47240 149 271 1.4E-8 T 11-10-2018 IPR009078 Ferritin-like superfamily YH65_08820 98c680ac75fb3c4e99b9bbf02f4b0600 397 Pfam PF00999 Sodium/hydrogen exchanger family 8 390 8.2E-74 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 YH65_08820 98c680ac75fb3c4e99b9bbf02f4b0600 397 Gene3D G3DSA:1.20.1530.20 3 397 1.5E-96 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily YH65_06200 69f45a11b11939009a0acdd51232d6f3 237 Pfam PF04256 Protein of unknown function (DUF434) 23 78 3.0E-20 T 11-10-2018 IPR007368 Protein of unknown function DUF434 YH65_06200 69f45a11b11939009a0acdd51232d6f3 237 ProDom PD019177 PF1672 MJ0935 ST1363 PH1730 UNCHARACTERIZED ARCHAEAL 24 64 2.0E-5 T 11-10-2018 IPR007368 Protein of unknown function DUF434 YH65_09570 8418237b6cfcbf804a27840a1971b2c0 102 Gene3D G3DSA:3.30.300.130 3 101 3.3E-31 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily YH65_09570 8418237b6cfcbf804a27840a1971b2c0 102 Pfam PF01883 Iron-sulfur cluster assembly protein 6 80 1.6E-17 T 11-10-2018 IPR002744 MIP18 family-like YH65_09570 8418237b6cfcbf804a27840a1971b2c0 102 SUPERFAMILY SSF117916 1 100 5.89E-30 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily YH65_01295 f7820196bea1efd174482f106da33757 82 Pfam PF04255 Protein of unknown function (DUF433) 13 68 9.5E-25 T 11-10-2018 IPR007367 Protein of unknown function DUF433 YH65_01295 f7820196bea1efd174482f106da33757 82 SUPERFAMILY SSF46689 10 72 1.97E-20 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 YH65_01295 f7820196bea1efd174482f106da33757 82 Gene3D G3DSA:1.10.10.10 12 74 1.7E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YH65_10330 22c825d2cd6e931c35ffdcd1463fc8ff 273 Pfam PF04403 Paraquat-inducible protein A 116 264 1.5E-16 T 11-10-2018 IPR007498 Intermembrane transport protein PqiA-like YH65_10420 33c2aeee4b6a213e4014776e0bf29259 152 Pfam PF13501 Sulfur oxidation protein SoxY 47 150 3.5E-28 T 11-10-2018 IPR032711 Ig-like SoxY domain YH65_10420 33c2aeee4b6a213e4014776e0bf29259 152 PIRSF PIRSF010312 1 152 2.0E-36 T 11-10-2018 IPR016568 Sulphur oxidation, SoxY YH65_10420 33c2aeee4b6a213e4014776e0bf29259 152 Gene3D G3DSA:2.60.40.2470 30 152 7.1E-35 T 11-10-2018 IPR038162 Ig-like SoxY domain superfamily YH65_10420 33c2aeee4b6a213e4014776e0bf29259 152 TIGRFAM TIGR04488 SoxY_true_GGCGG: thiosulfate oxidation carrier protein SoxY 2 152 6.6E-37 T 11-10-2018 IPR016568 Sulphur oxidation, SoxY YH65_02655 13bf8afae58f5a4715e1ec06bb74f64d 696 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 6 689 13.978 T 11-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 YH65_02655 13bf8afae58f5a4715e1ec06bb74f64d 696 Pfam PF04453 Organic solvent tolerance protein 302 504 2.5E-8 T 11-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 YH65_04250 87d90cfc9f32f31fc2d2ea04c2355da4 329 Pfam PF14281 PD-(D/E)XK nuclease superfamily 16 152 6.5E-5 T 11-10-2018 IPR029470 PD-(D/E)XK nuclease superfamily 4 YH65_05550 a9795f3700daa15fcf584b9328f5bb37 140 Pfam PF13899 Thioredoxin-like 30 105 4.8E-7 T 11-10-2018 YH65_05550 a9795f3700daa15fcf584b9328f5bb37 140 SUPERFAMILY SSF52833 30 133 5.32E-15 T 11-10-2018 IPR036249 Thioredoxin-like superfamily YH65_05550 a9795f3700daa15fcf584b9328f5bb37 140 Gene3D G3DSA:3.40.30.10 15 140 5.3E-14 T 11-10-2018 YH65_01285 71073bdc43c191a1ec23c658e98fa40e 447 Pfam PF05670 Domain of unknown function (DUF814) 341 421 4.3E-21 T 11-10-2018 IPR008532 Domain of unknown function DUF814 YH65_01285 71073bdc43c191a1ec23c658e98fa40e 447 Pfam PF05833 Fibronectin-binding protein A N-terminus (FbpA) 63 156 1.2E-16 T 11-10-2018 YH65_01285 71073bdc43c191a1ec23c658e98fa40e 447 Gene3D G3DSA:2.30.310.10 6 156 2.0E-18 T 11-10-2018 YH65_08755 bc73dd1cc2259b9ca7d1b74dff19ed14 281 Gene3D G3DSA:3.60.21.10 19 280 1.0E-24 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like YH65_08755 bc73dd1cc2259b9ca7d1b74dff19ed14 281 SUPERFAMILY SSF56300 34 274 3.37E-35 T 11-10-2018 YH65_08755 bc73dd1cc2259b9ca7d1b74dff19ed14 281 Pfam PF00149 Calcineurin-like phosphoesterase 34 235 2.0E-8 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 YH65_00745 51444849db75cc385ac5236bb014e1ab 191 SUPERFAMILY SSF46626 107 173 8.46E-10 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_00745 51444849db75cc385ac5236bb014e1ab 191 Gene3D G3DSA:1.10.760.10 107 177 1.6E-8 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 YH65_04155 74d32c32389f7f1554798fd1c73c8a67 424 Pfam PF07787 Transmembrane protein 43 107 349 4.7E-72 T 11-10-2018 IPR012430 Transmembrane protein 43 family YH65_10145 ffa78dd787d446a5b1db252ba1ac9045 76 Pfam PF13179 Family of unknown function (DUF4006) 3 70 1.3E-30 T 11-10-2018 IPR025065 Protein of unknown function DUF4006 YH65_05150 c3646131740acb47c7655324982b0b73 326 SUPERFAMILY SSF63418 31 88 2.09E-5 T 11-10-2018 IPR035911 MurE/MurF, N-terminal YH65_08995 2f7a8ae0c4c2ac14df54d5d3b4e43f51 172 Gene3D G3DSA:3.40.30.10 14 170 7.1E-30 T 11-10-2018 YH65_08995 2f7a8ae0c4c2ac14df54d5d3b4e43f51 172 SUPERFAMILY SSF52833 5 168 1.95E-23 T 11-10-2018 IPR036249 Thioredoxin-like superfamily YH65_08995 2f7a8ae0c4c2ac14df54d5d3b4e43f51 172 Pfam PF00578 AhpC/TSA family 43 150 2.5E-11 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 YH65_02850 b11772579bd59cd5ee85fdf59da6fecb 246 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 130 195 8.5E-10 T 11-10-2018 IPR029095 NarX-like, N-terminal YH65_02850 b11772579bd59cd5ee85fdf59da6fecb 246 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 15 101 4.8E-10 T 11-10-2018 IPR029095 NarX-like, N-terminal YH65_00290 129007c69ce35431dd6fa36a8ed5eb47 514 Pfam PF01384 Phosphate transporter family 48 502 2.5E-108 T 11-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 YH65_02880 0ee70fa79f4f7238717794072409a696 341 Pfam PF03739 Predicted permease YjgP/YjgQ family 7 323 1.2E-44 T 11-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 YH65_02460 1b9f62b34c23b04ca7d1c1687048cc16 246 Pfam PF11306 Protein of unknown function (DUF3108) 24 147 2.6E-7 T 11-10-2018 IPR021457 Protein of unknown function DUF3108 YH65_05955 1ca1d66d03ad601fd3b81cdc1ed4b75d 417 Pfam PF01566 Natural resistance-associated macrophage protein 40 390 7.7E-73 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 YH65_07095 7da2ca37cca8818348d95af832b1cfbc 422 Pfam PF01943 Polysaccharide biosynthesis protein 17 276 1.1E-9 T 11-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 YH65_04375 3ff0cfdba1841b77ed5d2a2b830a71c6 397 Pfam PF13941 MutL protein 5 348 2.4E-28 T 11-10-2018 IPR006230 Protein MutL YH65_02790 af84867f14a363d4c57e0f623198ad3f 175 SMART SM00900 80 169 0.0031 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 YH65_01960 c121763a43efd5c8b0b1db3b2a89974d 496 Pfam PF07394 Protein of unknown function (DUF1501) 41 474 4.1E-36 T 11-10-2018 IPR010869 Protein of unknown function DUF1501 YH65_03235 75a0965167fc7f53294ed1d2a441077c 190 Pfam PF01618 MotA/TolQ/ExbB proton channel family 77 176 2.4E-31 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel YH65_07375 78f578dd0d263c5e599346b2e1b5f8e0 605 Pfam PF02690 Na+/Pi-cotransporter 39 179 1.3E-41 T 11-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 YH65_07375 78f578dd0d263c5e599346b2e1b5f8e0 605 Pfam PF02690 Na+/Pi-cotransporter 203 312 3.3E-13 T 11-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 YH65_04590 47650d769fcc66f5c449cd69529e09ea 167 Pfam PF04143 Sulphur transport 3 152 4.2E-16 T 11-10-2018 IPR007272 Sulphur transport domain YH65_04460 22a460dbd817a642159925d8816d4544 144 SUPERFAMILY SSF55821 3 135 6.1E-11 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily YH65_04460 22a460dbd817a642159925d8816d4544 144 Gene3D G3DSA:3.90.870.10 1 144 1.5E-6 T 11-10-2018 YH65_00095 386d858b9aab7c6f31a401b2c8aab862 165 Pfam PF06271 RDD family 32 154 1.4E-17 T 11-10-2018 IPR010432 RDD YH65_06345 62e79e69a4f1537bc9c8b60664390310 110 Pfam PF14110 Domain of unknown function (DUF4282) 5 103 2.7E-21 T 11-10-2018 IPR025557 Protein of unknown function DUF4282 YH65_07485 9a71b21d5cf77d51e60c7f5fa20a5409 427 Pfam PF00860 Permease family 16 388 4.4E-37 T 11-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 YH65_08530 b6424a45799f8ecb6f7122433e77d0f6 87 Pfam PF14591 AF0941-like 3 78 2.1E-7 T 11-10-2018 IPR013502 Uncharacterised domain AF0941 YH65_01305 67b1cdd3c38862744c98ce20390f89e8 134 Pfam PF13279 Thioesterase-like superfamily 11 129 3.2E-15 T 11-10-2018 YH65_01305 67b1cdd3c38862744c98ce20390f89e8 134 SUPERFAMILY SSF54637 3 132 2.49E-45 T 11-10-2018 IPR029069 HotDog domain superfamily YH65_01305 67b1cdd3c38862744c98ce20390f89e8 134 Gene3D G3DSA:3.10.129.10 2 134 3.8E-40 T 11-10-2018 YH65_07925 3e2efcd7f5ae55d7d14b6fc891beb843 143 Pfam PF04186 FxsA cytoplasmic membrane protein 5 97 2.7E-16 T 11-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 YH65_07075 888fd0cd9a42cd017686f4874184be75 201 Pfam PF02397 Bacterial sugar transferase 4 178 3.3E-68 T 11-10-2018 IPR003362 Bacterial sugar transferase YH65_04830 cf57024a6dcfc8b7fbdd6df07f1c9acc 300 Pfam PF13280 WYL domain 118 291 2.2E-29 T 11-10-2018 IPR026881 WYL domain YH65_10045 8a3693293cf321b62d571ae30c892f53 101 Gene3D G3DSA:3.30.420.130 1 100 4.2E-5 T 11-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily YH65_10045 8a3693293cf321b62d571ae30c892f53 101 SUPERFAMILY SSF53146 1 99 2.62E-5 T 11-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily YH65_00990 d20f3e5c7c73b51323753b36faa53411 278 Pfam PF01061 ABC-2 type transporter 31 236 2.1E-24 T 11-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 YH65_06705 0a3a0cf834745de3837dd98853146abb 218 Pfam PF04403 Paraquat-inducible protein A 52 202 2.1E-38 T 11-10-2018 IPR007498 Intermembrane transport protein PqiA-like YH65_03760 84fc490776495960da4f87fea676edb9 170 Pfam PF03350 Uncharacterized protein family, UPF0114 9 136 4.3E-35 T 11-10-2018 IPR005134 Uncharacterised protein family UPF0114 YH65_03760 84fc490776495960da4f87fea676edb9 170 PIRSF PIRSF026509 1 170 2.4E-40 T 11-10-2018 IPR005134 Uncharacterised protein family UPF0114 YH65_04900 f6ef9e68fff7dddff4bbe2a8359c66f9 157 Pfam PF09990 Predicted membrane protein (DUF2231) 36 138 6.7E-7 T 11-10-2018 IPR019251 Domain of unknown function DUF2231, transmembrane YH65_00460 fc0874b8ece1c828ac5a73f3bbc89261 194 Gene3D G3DSA:3.30.110.40 1 76 6.5E-40 T 11-10-2018 IPR036868 TusA-like domain superfamily YH65_00460 fc0874b8ece1c828ac5a73f3bbc89261 194 Pfam PF16514 putative NADH-ubiquinone oxidoreductase chain E 1 74 3.7E-39 T 11-10-2018 IPR032424 Putative NADH-ubiquinone oxidoreductase chain E YH65_00645 81f49913cc7655cbbbc97e6473cac215 452 Gene3D G3DSA:2.40.160.10 40 452 1.2E-8 T 11-10-2018 IPR023614 Porin domain superfamily YH65_11110 dd9ce7276fb152c2f4b70a1d09b68e35 85 SUPERFAMILY SSF57783 16 68 6.23E-5 T 11-10-2018 YH65_06355 09d5f8a592e3c7ec7acfed61256a3236 235 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 21 230 2.0E-56 T 11-10-2018 IPR006214 Bax inhibitor 1-related YH65_07650 f8482dd58c81650b51741924c5e33e2a 216 Pfam PF05275 Copper resistance protein B precursor (CopB) 18 216 1.1E-72 T 11-10-2018 IPR007939 Copper resistance B precursor GO:0005507|GO:0006878|GO:0009279 YH65_03855 e06a0c0bfa9b7d91fc7d84bda274e45f 145 SUPERFAMILY SSF158682 15 79 2.75E-5 T 11-10-2018 IPR029024 TerB-like YH65_06070 2d7fbd075726186c7da3a2c42ee76821 437 Pfam PF09903 Uncharacterized protein conserved in bacteria (DUF2130) 185 430 1.0E-67 T 11-10-2018 IPR019219 Protein of unknown function DUF2130 YH65_06570 cbc1149bec4574e7e9026fcd7ad51a6b 181 Gene3D G3DSA:1.20.120.1630 1 161 7.3E-22 T 11-10-2018 YH65_06570 cbc1149bec4574e7e9026fcd7ad51a6b 181 Pfam PF04191 Phospholipid methyltransferase 74 149 1.7E-12 T 11-10-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 YH65_05945 8887d0efd33790f30ee790eefd634662 181 Pfam PF09335 SNARE associated Golgi protein 23 142 1.6E-16 T 11-10-2018 IPR032816 SNARE associated Golgi protein YH65_03740 e58515531eb2a34b4fb3ee6d0cb438b3 125 Pfam PF02472 Biopolymer transport protein ExbD/TolR 8 124 9.3E-26 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 YH65_04975 00d18126e46e0e73397db8a11dda6344 142 Pfam PF07308 Protein of unknown function (DUF1456) 1 55 1.6E-10 T 11-10-2018 IPR009921 Domain of unknown function DUF1456 YH65_04975 00d18126e46e0e73397db8a11dda6344 142 Pfam PF07308 Protein of unknown function (DUF1456) 71 133 5.7E-21 T 11-10-2018 IPR009921 Domain of unknown function DUF1456 YH65_00115 ae9bd548fe54c0e841db6c55b9bff9b5 142 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 14 33 0.0012 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site YH65_10275 5fa4ca6b4eef16dcf3e49dc4d676bd5b 165 Pfam PF07603 Protein of unknown function (DUF1566) 48 157 1.2E-16 T 11-10-2018 IPR011460 Protein of unknown function DUF1566 YH65_10920 cfa0759ef443cdf16132f5d8e447b17e 211 Gene3D G3DSA:1.10.10.10 1 72 9.3E-6 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily YH65_10920 cfa0759ef443cdf16132f5d8e447b17e 211 Pfam PF13118 Protein of unknown function (DUF3972) 5 120 5.1E-24 T 11-10-2018 IPR025002 Domain of unknown function DUF3972 YH65_06790 983322e7a14e4da6680ab446808139cb 82 SUPERFAMILY SSF47336 1 80 4.32E-13 T 11-10-2018 IPR036736 ACP-like superfamily YH65_06790 983322e7a14e4da6680ab446808139cb 82 Gene3D G3DSA:1.10.1200.10 1 80 8.3E-16 T 11-10-2018 IPR036736 ACP-like superfamily YH65_06790 983322e7a14e4da6680ab446808139cb 82 Pfam PF00550 Phosphopantetheine attachment site 10 75 4.5E-8 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain YH65_00100 3a207cb148a8a79b12b4f54335dd58d6 260 TIGRFAM TIGR04219 OMP_w_GlyGly: outer membrane protein 5 260 7.8E-53 T 11-10-2018 IPR026387 Outer membrane protein YH65_02860 aaac2bac5fd78a6949e24a6b4140c872 269 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 156 229 1.6E-9 T 11-10-2018 IPR029095 NarX-like, N-terminal YH65_02860 aaac2bac5fd78a6949e24a6b4140c872 269 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 42 92 6.2E-7 T 11-10-2018 IPR029095 NarX-like, N-terminal YH65_06035 032f673f510e1941fbe692796164b103 250 Pfam PF04338 Protein of unknown function, DUF481 37 248 1.1E-34 T 11-10-2018 IPR007433 Protein of unknown function DUF481 YH65_08605 c4511725196974c9b4882704a5f2fa7a 315 Pfam PF03916 Polysulphide reductase, NrfD 21 301 8.3E-20 T 11-10-2018 IPR005614 NrfD family YH65_08220 4ca06481fa353736a7228b21fde97e93 478 Pfam PF07787 Transmembrane protein 43 126 398 1.0E-61 T 11-10-2018 IPR012430 Transmembrane protein 43 family YH65_05705 1d0ef171a0a12ac72c5bad7ccf5d07c8 387 Pfam PF05684 Protein of unknown function (DUF819) 10 383 3.9E-107 T 11-10-2018 IPR008537 Protein of unknown function DUF819 YH65_09440 c04c2ee45ff3d75268dd3c895ec7338c 130 SUPERFAMILY SSF47175 24 126 2.69E-6 T 11-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 YH65_05230 3ee3206407ccc49b762fff50a22aa9f3 394 SUPERFAMILY SSF48208 14 164 6.24E-8 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 YH65_10930 253279ac3495b1025a4999b20bd0462b 275 Pfam PF01882 Protein of unknown function DUF58 32 109 5.8E-16 T 11-10-2018 IPR002881 Domain of unknown function DUF58 YH65_10180 0bc7ffb3e372ef156aa487bc17727d1e 183 Pfam PF04368 Protein of unknown function (DUF507) 1 182 3.0E-66 T 11-10-2018 IPR007463 Protein of unknown function DUF507 YH65_10280 db96784274e3e9ebeb22f1ab45ab6615 196 Gene3D G3DSA:2.40.440.10 33 196 9.1E-19 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like YH65_10280 db96784274e3e9ebeb22f1ab45ab6615 196 SUPERFAMILY SSF141523 57 194 2.22E-21 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like YH65_10280 db96784274e3e9ebeb22f1ab45ab6615 196 Pfam PF03734 L,D-transpeptidase catalytic domain 58 194 1.2E-15 T 11-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 YH65_02745 c7e3c085a61e7a2da171c41b46c0dfe7 306 Gene3D G3DSA:2.40.160.20 21 152 4.1E-7 T 11-10-2018 YH65_02745 c7e3c085a61e7a2da171c41b46c0dfe7 306 SUPERFAMILY SSF56925 38 160 6.54E-9 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel YH65_06410 010d8d4ee820ba2f4eec432dec0cdbce 315 Pfam PF03773 Predicted permease 21 312 2.0E-69 T 11-10-2018 IPR005524 Predicted permease DUF318 YH65_05920 536c4695df9e9339d45e048f69df7bd3 415 Pfam PF13194 Domain of unknown function (DUF4010) 184 390 1.0E-59 T 11-10-2018 IPR025105 Domain of unknown function DUF4010 YH65_02650 90d1ea7ea30daeb06131ea8001b53ea4 150 Pfam PF06271 RDD family 9 144 3.2E-25 T 11-10-2018 IPR010432 RDD YH65_02780 efc2e874286e779cc4b3623273389a7b 509 Pfam PF07556 Protein of unknown function (DUF1538) 22 231 5.9E-69 T 11-10-2018 IPR011435 Protein of unknown function DUF1538 YH65_02780 efc2e874286e779cc4b3623273389a7b 509 Pfam PF07556 Protein of unknown function (DUF1538) 279 488 1.8E-74 T 11-10-2018 IPR011435 Protein of unknown function DUF1538 YH65_02070 a582d0b5b88e7d68a5d450f3a9dacd59 707 SUPERFAMILY SSF81301 109 314 2.94E-8 T 11-10-2018 YH65_02565 c3bb18d6b4dab23a559ee9c76a76b11a 154 Pfam PF05258 Protein of unknown function (DUF721) 4 75 9.1E-5 T 11-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 YH65_07175 9b2b38af100836b4b3f41ba33b9aed57 217 SUPERFAMILY SSF117074 78 181 3.66E-14 T 11-10-2018