locus-tag class description LN246_00005 PF00308 Bacterial dnaA protein LN246_00005 PF08299 Bacterial dnaA protein helix-turn-helix LN246_00005 PF11638 DnaA N-terminal domain LN246_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain LN246_00010 PF02767 DNA polymerase III beta subunit, central domain LN246_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain LN246_00015 PF06418 CTP synthase N-terminus LN246_00015 PF00117 Glutamine amidotransferase class-I LN246_00020 PF01368 DHH family LN246_00020 PF02272 DHHA1 domain LN246_00020 PF17768 RecJ OB domain LN246_00020 PF10141 Single-strand DNA-specific exonuclease, C terminal domain LN246_00040 PF10518 TAT (twin-arginine translocation) pathway signal sequence LN246_00040 PF01568 Molydopterin dinucleotide binding domain LN246_00040 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LN246_00040 PF00384 Molybdopterin oxidoreductase LN246_00045 PF13247 4Fe-4S dicluster domain LN246_00055 PF01883 Iron-sulfur cluster assembly protein LN246_00055 PF10609 NUBPL iron-transfer P-loop NTPase LN246_00065 PF04324 BFD-like [2Fe-2S] binding domain LN246_00065 PF01106 NifU-like domain LN246_00065 PF01592 NifU-like N terminal domain LN246_00070 PF00266 Aminotransferase class-V LN246_00075 PF01227 GTP cyclohydrolase I LN246_00085 PF14815 NUDIX domain LN246_00085 PF00730 HhH-GPD superfamily base excision DNA repair protein LN246_00090 PF02001 Protein of unknown function DUF134 LN246_00120 PF01980 tRNA-methyltransferase O LN246_00120 PF18389 TrmO C-terminal domain LN246_00130 PF12706 Beta-lactamase superfamily domain LN246_00135 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LN246_00135 PF05698 Bacterial trigger factor protein (TF) C-terminus LN246_00135 PF05697 Bacterial trigger factor protein (TF) LN246_00140 PF00574 Clp protease LN246_00145 PF01327 Polypeptide deformylase LN246_00150 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LN246_00150 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LN246_00155 PF13335 Magnesium chelatase, subunit ChlI C-terminal LN246_00155 PF01078 Magnesium chelatase, subunit ChlI LN246_00160 PF04002 RadC-like JAB domain LN246_00165 PF03601 Conserved hypothetical protein 698 LN246_00170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LN246_00170 PF03466 LysR substrate binding domain LN246_00175 PF12804 MobA-like NTP transferase domain LN246_00180 PF12832 MFS_1 like family LN246_00195 PF00482 Type II secretion system (T2SS), protein F LN246_00210 PF08334 Type II secretion system (T2SS), protein G LN246_00210 PF07963 Prokaryotic N-terminal methylation motif LN246_00240 PF03958 Bacterial type II/III secretion system short domain LN246_00240 PF00263 Bacterial type II and III secretion system protein LN246_00245 PF00437 Type II/IV secretion system protein LN246_00265 PF00156 Phosphoribosyl transferase domain LN246_00270 PF01765 Ribosome recycling factor LN246_00275 PF03840 Preprotein translocase SecG subunit LN246_00280 PF05175 Methyltransferase small domain LN246_00280 PF17827 PrmC N-terminal domain LN246_00285 PF17792 ThiD2 family LN246_00285 PF02581 Thiamine monophosphate synthase LN246_00290 PF01027 Inhibitor of apoptosis-promoting Bax1 LN246_00355 PF00174 Oxidoreductase molybdopterin binding domain LN246_00380 PF03462 PCRF domain LN246_00380 PF00472 RF-1 domain LN246_00385 PF01649 Ribosomal protein S20 LN246_00390 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LN246_00390 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LN246_00390 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LN246_00390 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LN246_00395 PF01252 Signal peptidase (SPase) II LN246_00405 PF00459 Inositol monophosphatase family LN246_00410 PF04403 Paraquat-inducible protein A LN246_00420 PF01967 MoaC family LN246_00430 PF13746 4Fe-4S dicluster domain LN246_00430 PF12801 4Fe-4S binding domain LN246_00430 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase LN246_00455 PF08534 Redoxin LN246_00480 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LN246_00490 PF00154 recA bacterial DNA recombination protein LN246_00495 PF06968 Biotin and Thiamin Synthesis associated domain LN246_00495 PF04055 Radical SAM superfamily LN246_00515 PF00113 Enolase, C-terminal TIM barrel domain LN246_00515 PF03952 Enolase, N-terminal domain LN246_00520 PF11992 Domain of unknown function (DUF3488) LN246_00520 PF13559 Domain of unknown function (DUF4129) LN246_00520 PF01841 Transglutaminase-like superfamily LN246_00530 PF07726 ATPase family associated with various cellular activities (AAA) LN246_00530 PF17863 AAA lid domain LN246_00535 PF01396 Topoisomerase DNA binding C4 zinc finger LN246_00535 PF01751 Toprim domain LN246_00535 PF01131 DNA topoisomerase LN246_00540 PF00692 dUTPase LN246_00555 PF00483 Nucleotidyl transferase LN246_00560 PF16363 GDP-mannose 4,6 dehydratase LN246_00565 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LN246_00570 PF08889 WbqC-like protein family LN246_00585 PF01943 Polysaccharide biosynthesis protein LN246_00590 PF00535 Glycosyl transferase family 2 LN246_00610 PF00535 Glycosyl transferase family 2 LN246_00615 PF18527 STT3/PglB C-terminal beta-barrel domain LN246_00615 PF02516 Oligosaccharyl transferase STT3 subunit LN246_00630 PF00749 tRNA synthetases class I (E and Q), catalytic domain LN246_00640 PF00563 EAL domain LN246_00640 PF00990 Diguanylate cyclase, GGDEF domain LN246_00640 PF03707 Bacterial signalling protein N terminal repeat LN246_00665 PF02391 MoaE protein LN246_00670 PF03454 MoeA C-terminal region (domain IV) LN246_00670 PF00994 Probable molybdopterin binding domain LN246_00670 PF03453 MoeA N-terminal region (domain I and II) LN246_00710 PF01253 Translation initiation factor SUI1 LN246_00715 PF01699 Sodium/calcium exchanger protein LN246_00720 PF03448 MgtE intracellular N domain LN246_00720 PF01769 Divalent cation transporter LN246_00720 PF00571 CBS domain LN246_00725 PF03883 Peroxide stress protein YaaA LN246_00750 PF00009 Elongation factor Tu GTP binding domain LN246_00750 PF03143 Elongation factor Tu C-terminal domain LN246_00750 PF03144 Elongation factor Tu domain 2 LN246_00755 PF00471 Ribosomal protein L33 LN246_00770 PF02357 Transcription termination factor nusG LN246_00775 PF03946 Ribosomal protein L11, N-terminal domain LN246_00775 PF00298 Ribosomal protein L11, RNA binding domain LN246_00780 PF00687 Ribosomal protein L1p/L10e family LN246_00785 PF00466 Ribosomal protein L10 LN246_00790 PF16320 Ribosomal protein L7/L12 dimerisation domain LN246_00790 PF00542 Ribosomal protein L7/L12 C-terminal domain LN246_00795 PF04565 RNA polymerase Rpb2, domain 3 LN246_00795 PF10385 RNA polymerase beta subunit external 1 domain LN246_00795 PF00562 RNA polymerase Rpb2, domain 6 LN246_00795 PF04560 RNA polymerase Rpb2, domain 7 LN246_00795 PF04561 RNA polymerase Rpb2, domain 2 LN246_00795 PF04563 RNA polymerase beta subunit LN246_00800 PF04998 RNA polymerase Rpb1, domain 5 LN246_00800 PF05000 RNA polymerase Rpb1, domain 4 LN246_00800 PF04983 RNA polymerase Rpb1, domain 3 LN246_00800 PF00623 RNA polymerase Rpb1, domain 2 LN246_00800 PF04997 RNA polymerase Rpb1, domain 1 LN246_00805 PF00164 Ribosomal protein S12/S23 LN246_00810 PF00177 Ribosomal protein S7p/S5e LN246_00815 PF14492 Elongation Factor G, domain II LN246_00815 PF03144 Elongation factor Tu domain 2 LN246_00815 PF00679 Elongation factor G C-terminus LN246_00815 PF00009 Elongation factor Tu GTP binding domain LN246_00815 PF03764 Elongation factor G, domain IV LN246_00835 PF14489 QueF-like protein LN246_00840 PF17153 Periplasmic sensor domain, extracellular LN246_00840 PF00563 EAL domain LN246_00845 PF01751 Toprim domain LN246_00845 PF00986 DNA gyrase B subunit, carboxyl terminus LN246_00845 PF00204 DNA gyrase B LN246_00845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LN246_00850 PF00814 Glycoprotease family LN246_00860 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LN246_00860 PF13288 DXP reductoisomerase C-terminal domain LN246_00860 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LN246_00870 PF05670 NFACT protein RNA binding domain LN246_00875 PF00330 Aconitase family (aconitate hydratase) LN246_00900 PF13085 2Fe-2S iron-sulfur cluster binding domain LN246_00900 PF13183 4Fe-4S dicluster domain LN246_00910 PF00890 FAD binding domain LN246_00910 PF02910 Fumarate reductase flavoprotein C-term LN246_00915 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LN246_00915 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LN246_00920 PF02222 ATP-grasp domain LN246_00925 PF01165 Ribosomal protein S21 LN246_00935 PF01256 Carbohydrate kinase LN246_00935 PF03853 YjeF-related protein N-terminus LN246_00940 PF00551 Formyl transferase LN246_00965 PF01554 MatE LN246_00980 PF01202 Shikimate kinase LN246_00990 PF00348 Polyprenyl synthetase LN246_00995 PF02779 Transketolase, pyrimidine binding domain LN246_00995 PF00456 Transketolase, thiamine diphosphate binding domain LN246_00995 PF02780 Transketolase, C-terminal domain LN246_01005 PF07690 Major Facilitator Superfamily LN246_01010 PF01725 Ham1 family LN246_01030 PF00486 Transcriptional regulatory protein, C terminal LN246_01030 PF00072 Response regulator receiver domain LN246_01035 PF00672 HAMP domain LN246_01035 PF00512 His Kinase A (phospho-acceptor) domain LN246_01035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LN246_01040 PF00266 Aminotransferase class-V LN246_01045 PF13393 Histidyl-tRNA synthetase LN246_01050 PF00709 Adenylosuccinate synthetase LN246_01060 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LN246_01060 PF00117 Glutamine amidotransferase class-I LN246_01065 PF07478 D-ala D-ala ligase C-terminus LN246_01065 PF01820 D-ala D-ala ligase N-terminus LN246_01070 PF00115 Cytochrome C and Quinol oxidase polypeptide I LN246_01085 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LN246_01085 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP LN246_01105 PF06969 HemN C-terminal domain LN246_01105 PF04055 Radical SAM superfamily LN246_01115 PF13361 UvrD-like helicase C-terminal domain LN246_01115 PF00580 UvrD/REP helicase N-terminal domain LN246_01115 PF12705 PD-(D/E)XK nuclease superfamily LN246_01120 PF00196 Bacterial regulatory proteins, luxR family LN246_01120 PF00072 Response regulator receiver domain LN246_01125 PF00572 Ribosomal protein L13 LN246_01130 PF00380 Ribosomal protein S9/S16 LN246_01145 PF01327 Polypeptide deformylase LN246_01165 PF13419 Haloacid dehalogenase-like hydrolase LN246_01170 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase LN246_01180 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg LN246_01180 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II LN246_01185 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LN246_01190 PF00440 Bacterial regulatory proteins, tetR family LN246_01190 PF08360 QacR-like protein, C-terminal region LN246_01200 PF02664 S-Ribosylhomocysteinase (LuxS) LN246_01220 PF00677 Lumazine binding domain LN246_01225 PF13932 GidA associated domain LN246_01225 PF01134 Glucose inhibited division protein A LN246_01260 PF05973 Phage derived protein Gp49-like (DUF891) LN246_01275 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal LN246_01275 PF00355 Rieske [2Fe-2S] domain LN246_01280 PF00033 Cytochrome b/b6/petB LN246_01280 PF00032 Cytochrome b(C-terminal)/b6/petD LN246_01285 PF02167 Cytochrome C1 family LN246_01290 PF06463 Molybdenum Cofactor Synthesis C LN246_01290 PF04055 Radical SAM superfamily LN246_01320 PF03453 MoeA N-terminal region (domain I and II) LN246_01320 PF03454 MoeA C-terminal region (domain IV) LN246_01320 PF00994 Probable molybdopterin binding domain LN246_01330 PF04452 RNA methyltransferase LN246_01345 PF01197 Ribosomal protein L31 LN246_01350 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LN246_01355 PF08032 RNA 2'-O ribose methyltransferase substrate binding LN246_01355 PF00588 SpoU rRNA Methylase family LN246_01365 PF00155 Aminotransferase class I and II LN246_01370 PF03447 Homoserine dehydrogenase, NAD binding domain LN246_01370 PF00742 Homoserine dehydrogenase LN246_01370 PF01842 ACT domain LN246_01375 PF04461 Protein of unknown function (DUF520) LN246_01385 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LN246_01385 PF00384 Molybdopterin oxidoreductase LN246_01385 PF01568 Molydopterin dinucleotide binding domain LN246_01390 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding LN246_01390 PF18381 YcaO cyclodehydratase C-terminal domain LN246_01395 PF02021 Uncharacterised protein family UPF0102 LN246_01400 PF05721 Phytanoyl-CoA dioxygenase (PhyH) LN246_01405 PF00085 Thioredoxin LN246_01410 PF07992 Pyridine nucleotide-disulphide oxidoreductase LN246_01415 PF05173 Dihydrodipicolinate reductase, C-terminus LN246_01415 PF01113 Dihydrodipicolinate reductase, N-terminus LN246_01420 PF00156 Phosphoribosyl transferase domain LN246_01425 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LN246_01425 PF01502 Phosphoribosyl-AMP cyclohydrolase LN246_01440 PF01063 Amino-transferase class IV LN246_01445 PF00171 Aldehyde dehydrogenase family LN246_01460 PF13180 PDZ domain LN246_01460 PF17820 PDZ domain LN246_01470 PF00578 AhpC/TSA family LN246_01485 PF00889 Elongation factor TS LN246_01490 PF00484 Carbonic anhydrase LN246_01495 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LN246_01495 PF02785 Biotin carboxylase C-terminal domain LN246_01495 PF00289 Biotin carboxylase, N-terminal domain LN246_01500 PF12833 Helix-turn-helix domain LN246_01505 PF00005 ABC transporter LN246_01510 PF00472 RF-1 domain LN246_01510 PF03462 PCRF domain LN246_01515 PF02569 Pantoate-beta-alanine ligase LN246_01525 PF01098 Cell cycle protein LN246_01530 PF04101 Glycosyltransferase family 28 C-terminal domain LN246_01530 PF03033 Glycosyltransferase family 28 N-terminal domain LN246_01540 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LN246_01540 PF01411 tRNA synthetases class II (A) LN246_01540 PF02272 DHHA1 domain LN246_01550 PF02545 Maf-like protein LN246_01555 PF00155 Aminotransferase class I and II LN246_01560 PF17092 Penicillin-binding protein OB-like domain LN246_01560 PF00912 Transglycosylase LN246_01560 PF00905 Penicillin binding protein transpeptidase domain LN246_01575 PF00120 Glutamine synthetase, catalytic domain LN246_01575 PF03951 Glutamine synthetase, beta-Grasp domain LN246_01585 PF01136 Peptidase family U32 LN246_01590 PF00731 AIR carboxylase LN246_01595 PF02091 Glycyl-tRNA synthetase alpha subunit LN246_01600 PF01784 NIF3 (NGG1p interacting factor 3) LN246_01610 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) LN246_01610 PF00534 Glycosyl transferases group 1 LN246_01615 PF02594 Uncharacterised ACR, YggU family COG1872 LN246_01620 PF00849 RNA pseudouridylate synthase LN246_01625 PF02881 SRP54-type protein, helical bundle domain LN246_01625 PF02978 Signal peptide binding domain LN246_01625 PF00448 SRP54-type protein, GTPase domain LN246_01630 PF00886 Ribosomal protein S16 LN246_01640 PF01782 RimM N-terminal domain LN246_01645 PF01746 tRNA (Guanine-1)-methyltransferase LN246_01650 PF01245 Ribosomal protein L19 LN246_01675 PF00873 AcrB/AcrD/AcrF family LN246_01690 PF01668 SmpB protein LN246_01700 PF00849 RNA pseudouridylate synthase LN246_01715 PF00288 GHMP kinases N terminal domain LN246_01720 PF01509 TruB family pseudouridylate synthase (N terminal domain) LN246_01725 PF00580 UvrD/REP helicase N-terminal domain LN246_01725 PF13361 UvrD-like helicase C-terminal domain LN246_01730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LN246_01730 PF03466 LysR substrate binding domain LN246_01740 PF01063 Amino-transferase class IV LN246_01745 PF00291 Pyridoxal-phosphate dependent enzyme LN246_01750 PF00484 Carbonic anhydrase LN246_01755 PF04909 Amidohydrolase LN246_01760 PF01809 Putative membrane protein insertion efficiency factor LN246_01765 PF00733 Asparagine synthase LN246_01765 PF13537 Glutamine amidotransferase domain LN246_01775 PF02699 Preprotein translocase subunit LN246_01780 PF02355 Protein export membrane protein LN246_01785 PF07549 SecD/SecF GG Motif LN246_01785 PF02355 Protein export membrane protein LN246_01795 PF12867 DinB superfamily LN246_01795 PF03781 Sulfatase-modifying factor enzyme 1 LN246_01800 PF00155 Aminotransferase class I and II LN246_01805 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family LN246_01810 PF00155 Aminotransferase class I and II LN246_01820 PF01225 Mur ligase family, catalytic domain LN246_01820 PF02875 Mur ligase family, glutamate ligase domain LN246_01820 PF08245 Mur ligase middle domain LN246_01825 PF00488 MutS domain V LN246_01825 PF01713 Smr domain LN246_01840 PF15437 Plasminogen-binding protein pgbA C-terminal LN246_01845 PF02899 Phage integrase, N-terminal SAM-like domain LN246_01845 PF00589 Phage integrase family LN246_01855 PF03309 Type III pantothenate kinase LN246_01860 PF01634 ATP phosphoribosyltransferase LN246_01875 PF01483 Proprotein convertase P-domain LN246_01875 PF00082 Subtilase family LN246_01895 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LN246_01895 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal LN246_01900 PF00374 Nickel-dependent hydrogenase LN246_01910 PF10518 TAT (twin-arginine translocation) pathway signal sequence LN246_01910 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal LN246_01910 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LN246_01915 PF00374 Nickel-dependent hydrogenase LN246_01920 PF01292 Prokaryotic cytochrome b561 LN246_01925 PF01750 Hydrogenase maturation protease LN246_01945 PF00708 Acylphosphatase LN246_01945 PF17788 HypF Kae1-like domain LN246_01945 PF01300 Telomere recombination LN246_01945 PF07503 HypF finger LN246_01960 PF01695 IstB-like ATP binding protein LN246_01965 PF10414 Sirohaem synthase dimerisation region LN246_01965 PF14824 Sirohaem biosynthesis protein central LN246_01965 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LN246_01985 PF02492 CobW/HypB/UreG, nucleotide-binding domain LN246_01990 PF01455 HupF/HypC family LN246_01995 PF01924 Hydrogenase formation hypA family LN246_02000 PF00586 AIR synthase related protein, N-terminal domain LN246_02000 PF02769 AIR synthase related protein, C-terminal domain LN246_02005 PF00378 Enoyl-CoA hydratase/isomerase LN246_02005 PF02911 Formyl transferase, C-terminal domain LN246_02005 PF00551 Formyl transferase LN246_02010 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA LN246_02020 PF01750 Hydrogenase maturation protease LN246_02025 PF01084 Ribosomal protein S18 LN246_02030 PF00436 Single-strand binding protein family LN246_02035 PF01250 Ribosomal protein S6 LN246_02040 PF06144 DNA polymerase III, delta subunit LN246_02045 PF00773 RNB domain LN246_02050 PF01435 Peptidase family M48 LN246_02060 PF07494 Two component regulator propeller LN246_02060 PF12833 Helix-turn-helix domain LN246_02060 PF00512 His Kinase A (phospho-acceptor) domain LN246_02060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LN246_02060 PF00072 Response regulator receiver domain LN246_02060 PF07495 Y_Y_Y domain LN246_02065 PF00672 HAMP domain LN246_02065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LN246_02065 PF18698 Histidine kinase sensor domain LN246_02065 PF00512 His Kinase A (phospho-acceptor) domain LN246_02065 PF00989 PAS fold LN246_02090 PF02872 5'-nucleotidase, C-terminal domain LN246_02090 PF00149 Calcineurin-like phosphoesterase LN246_02100 PF16123 Hydroxyacylglutathione hydrolase C-terminus LN246_02100 PF00753 Metallo-beta-lactamase superfamily LN246_02135 PF01145 SPFH domain / Band 7 family LN246_02150 PF01479 S4 domain LN246_02150 PF00849 RNA pseudouridylate synthase LN246_02155 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LN246_02155 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LN246_02160 PF04748 Divergent polysaccharide deacetylase LN246_02165 PF00939 Sodium:sulfate symporter transmembrane region LN246_02175 PF02481 DNA recombination-mediator protein A LN246_02180 PF00578 AhpC/TSA family LN246_02190 PF00933 Glycosyl hydrolase family 3 N terminal domain LN246_02210 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LN246_02215 PF00005 ABC transporter LN246_02215 PF02687 FtsX-like permease family LN246_02215 PF12704 MacB-like periplasmic core domain LN246_02220 PF00005 ABC transporter LN246_02220 PF02687 FtsX-like permease family LN246_02220 PF12704 MacB-like periplasmic core domain LN246_02225 PF03652 Holliday junction resolvase LN246_02235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LN246_02235 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LN246_02235 PF00072 Response regulator receiver domain LN246_02235 PF01627 Hpt domain LN246_02235 PF00672 HAMP domain LN246_02235 PF00512 His Kinase A (phospho-acceptor) domain LN246_02245 PF00877 NlpC/P60 family LN246_02250 PF02547 Queuosine biosynthesis protein LN246_02255 PF00902 Sec-independent protein translocase protein (TatC) LN246_02260 PF02416 mttA/Hcf106 family LN246_02265 PF04055 Radical SAM superfamily LN246_02265 PF06969 HemN C-terminal domain LN246_02270 PF00293 NUDIX domain LN246_02275 PF00696 Amino acid kinase family LN246_02275 PF01842 ACT domain LN246_02275 PF13840 ACT domain LN246_02290 PF00809 Pterin binding enzyme LN246_02295 PF12826 Helix-hairpin-helix motif LN246_02295 PF01653 NAD-dependent DNA ligase adenylation domain LN246_02295 PF00533 BRCA1 C Terminus (BRCT) domain LN246_02295 PF03120 NAD-dependent DNA ligase OB-fold domain LN246_02310 PF06574 FAD synthetase LN246_02310 PF01687 Riboflavin kinase LN246_02315 PF12146 Serine aminopeptidase, S33 LN246_02320 PF03707 Bacterial signalling protein N terminal repeat LN246_02320 PF00990 Diguanylate cyclase, GGDEF domain LN246_02320 PF00563 EAL domain LN246_02325 PF13649 Methyltransferase domain LN246_02330 PF01474 Class-II DAHP synthetase family LN246_02340 PF00072 Response regulator receiver domain LN246_02340 PF00486 Transcriptional regulatory protein, C terminal LN246_02345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LN246_02345 PF00512 His Kinase A (phospho-acceptor) domain LN246_02345 PF08448 PAS fold LN246_02345 PF13188 PAS domain LN246_02345 PF00072 Response regulator receiver domain LN246_02350 PF12833 Helix-turn-helix domain LN246_02350 PF00072 Response regulator receiver domain LN246_02355 PF08501 Shikimate dehydrogenase substrate binding domain LN246_02360 PF00593 TonB dependent receptor LN246_02360 PF07715 TonB-dependent Receptor Plug Domain LN246_02375 PF12801 4Fe-4S binding domain LN246_02380 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component LN246_02385 PF01869 BadF/BadG/BcrA/BcrD ATPase family LN246_02390 PF00873 AcrB/AcrD/AcrF family LN246_02395 PF07715 TonB-dependent Receptor Plug Domain LN246_02395 PF00593 TonB dependent receptor LN246_02400 PF00425 chorismate binding enzyme LN246_02400 PF04715 Anthranilate synthase component I, N terminal region LN246_02415 PF00464 Serine hydroxymethyltransferase LN246_02430 PF01336 OB-fold nucleic acid binding domain LN246_02430 PF00152 tRNA synthetases class II (D, K and N) LN246_02435 PF01475 Ferric uptake regulator family LN246_02445 PF00437 Type II/IV secretion system protein LN246_02450 PF03960 ArsC family LN246_02455 PF02686 Glu-tRNAGln amidotransferase C subunit LN246_02465 PF00581 Rhodanese-like domain LN246_02465 PF17773 UPF0176 acylphosphatase like domain LN246_02470 PF05728 Uncharacterised protein family (UPF0227) LN246_02475 PF07687 Peptidase dimerisation domain LN246_02475 PF01546 Peptidase family M20/M25/M40 LN246_02485 PF00989 PAS fold LN246_02485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LN246_02485 PF00512 His Kinase A (phospho-acceptor) domain LN246_02485 PF00672 HAMP domain LN246_02490 PF13247 4Fe-4S dicluster domain LN246_02500 PF00384 Molybdopterin oxidoreductase LN246_02500 PF01568 Molydopterin dinucleotide binding domain LN246_02525 PF00390 Malic enzyme, N-terminal domain LN246_02525 PF03949 Malic enzyme, NAD binding domain LN246_02525 PF01515 Phosphate acetyl/butaryl transferase LN246_02535 PF14306 PUA-like domain LN246_02535 PF01747 ATP-sulfurylase LN246_02540 PF00486 Transcriptional regulatory protein, C terminal LN246_02540 PF00072 Response regulator receiver domain LN246_02545 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LN246_02545 PF02542 YgbB family LN246_02550 PF01883 Iron-sulfur cluster assembly protein LN246_02550 PF10609 NUBPL iron-transfer P-loop NTPase LN246_02590 PF01380 SIS domain LN246_02595 PF01966 HD domain LN246_02595 PF08335 GlnD PII-uridylyltransferase LN246_02600 PF04055 Radical SAM superfamily LN246_02610 PF00117 Glutamine amidotransferase class-I LN246_02625 PF02629 CoA binding domain LN246_02625 PF00549 CoA-ligase LN246_02690 PF00206 Lyase LN246_02690 PF14698 Argininosuccinate lyase C-terminal LN246_02715 PF10417 C-terminal domain of 1-Cys peroxiredoxin LN246_02715 PF00578 AhpC/TSA family LN246_02735 PF00571 CBS domain LN246_02735 PF01769 Divalent cation transporter LN246_02735 PF03448 MgtE intracellular N domain LN246_02740 PF05690 Thiazole biosynthesis protein ThiG LN246_02750 PF01266 FAD dependent oxidoreductase LN246_02755 PF13667 ThiC-associated domain LN246_02755 PF01964 Radical SAM ThiC family LN246_02775 PF07715 TonB-dependent Receptor Plug Domain LN246_02775 PF00593 TonB dependent receptor LN246_02780 PF01230 HIT domain LN246_02785 PF01409 tRNA synthetases class II core domain (F) LN246_02785 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LN246_02790 PF01588 Putative tRNA binding domain LN246_02790 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LN246_02790 PF03147 Ferredoxin-fold anticodon binding domain LN246_02790 PF03484 tRNA synthetase B5 domain LN246_02795 PF02401 LytB protein LN246_02800 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LN246_02805 PF00575 S1 RNA binding domain LN246_02810 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LN246_02810 PF01842 ACT domain LN246_02810 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LN246_02820 PF13533 Biotin-lipoyl like LN246_02830 PF01132 Elongation factor P (EF-P) OB domain LN246_02830 PF08207 Elongation factor P (EF-P) KOW-like domain LN246_02830 PF09285 Elongation factor P, C-terminal LN246_02835 PF01965 DJ-1/PfpI family LN246_02840 PF02811 PHP domain LN246_02840 PF14579 Helix-hairpin-helix motif LN246_02840 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LN246_02840 PF07733 Bacterial DNA polymerase III alpha NTPase domain LN246_02850 PF02254 TrkA-N domain LN246_02850 PF00999 Sodium/hydrogen exchanger family LN246_02855 PF03971 Monomeric isocitrate dehydrogenase LN246_02860 PF00056 lactate/malate dehydrogenase, NAD binding domain LN246_02860 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LN246_02865 PF00056 lactate/malate dehydrogenase, NAD binding domain LN246_02865 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LN246_02870 PF05683 Fumarase C-terminus LN246_02870 PF05681 Fumarate hydratase (Fumerase) LN246_02875 PF05681 Fumarate hydratase (Fumerase) LN246_02875 PF05683 Fumarase C-terminus LN246_02880 PF00206 Lyase LN246_02880 PF10415 Fumarase C C-terminus LN246_02885 PF08442 ATP-grasp domain LN246_02885 PF00549 CoA-ligase LN246_02890 PF02629 CoA binding domain LN246_02890 PF00549 CoA-ligase LN246_02905 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II LN246_02905 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase LN246_02905 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg LN246_02910 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LN246_02990 PF00717 Peptidase S24-like LN246_02990 PF01726 LexA DNA binding domain LN246_03250 PF00717 Peptidase S24-like LN246_03250 PF01726 LexA DNA binding domain LN246_03470 PF00202 Aminotransferase class-III LN246_03490 PF01648 4'-phosphopantetheinyl transferase superfamily LN246_03495 PF01497 Periplasmic binding protein LN246_03505 PF18073 Rubredoxin metal binding domain LN246_03510 PF01553 Acyltransferase LN246_03515 PF00448 SRP54-type protein, GTPase domain LN246_03525 PF01812 5-formyltetrahydrofolate cyclo-ligase family LN246_03530 PF01966 HD domain LN246_03530 PF00013 KH domain LN246_03530 PF12072 Domain of unknown function (DUF3552) LN246_03540 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LN246_03545 PF08003 Protein of unknown function (DUF1698) LN246_03550 PF00486 Transcriptional regulatory protein, C terminal LN246_03550 PF00072 Response regulator receiver domain LN246_03555 PF01008 Initiation factor 2 subunit family LN246_03555 PF03061 Thioesterase superfamily LN246_03565 PF04305 Protein of unknown function (DUF455) LN246_03570 PF02606 Tetraacyldisaccharide-1-P 4'-kinase LN246_03575 PF00696 Amino acid kinase family LN246_03580 PF00034 Cytochrome c LN246_03580 PF03150 Di-haem cytochrome c peroxidase LN246_03585 PF03707 Bacterial signalling protein N terminal repeat LN246_03585 PF00563 EAL domain LN246_03585 PF00990 Diguanylate cyclase, GGDEF domain LN246_03590 PF00291 Pyridoxal-phosphate dependent enzyme LN246_03605 PF16326 ABC transporter C-terminal domain LN246_03605 PF12848 ABC transporter LN246_03605 PF00005 ABC transporter LN246_03610 PF16491 CAAX prenyl protease N-terminal, five membrane helices LN246_03610 PF01435 Peptidase family M48 LN246_03615 PF17827 PrmC N-terminal domain LN246_03615 PF05175 Methyltransferase small domain LN246_03630 PF00149 Calcineurin-like phosphoesterase LN246_03645 PF07568 Histidine kinase LN246_03645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LN246_03645 PF12282 Signal transduction histidine kinase LN246_03650 PF03738 Glutathionylspermidine synthase preATP-grasp LN246_03660 PF00091 Tubulin/FtsZ family, GTPase domain LN246_03660 PF12327 FtsZ family, C-terminal domain LN246_03665 PF02491 SHS2 domain inserted in FTSA LN246_03670 PF13145 PPIC-type PPIASE domain LN246_03675 PF00202 Aminotransferase class-III LN246_03690 PF01795 MraW methylase family LN246_03700 PF00873 AcrB/AcrD/AcrF family LN246_03710 PF00348 Polyprenyl synthetase LN246_03715 PF01488 Shikimate / quinate 5-dehydrogenase LN246_03715 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LN246_03715 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LN246_03720 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LN246_03720 PF04073 Aminoacyl-tRNA editing domain LN246_03720 PF03129 Anticodon binding domain LN246_03735 PF03900 Porphobilinogen deaminase, C-terminal domain LN246_03735 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LN246_03740 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase LN246_03745 PF10417 C-terminal domain of 1-Cys peroxiredoxin LN246_03745 PF00578 AhpC/TSA family LN246_03750 PF01475 Ferric uptake regulator family LN246_03755 PF01168 Alanine racemase, N-terminal domain LN246_03870 PF02163 Peptidase family M50 LN246_03870 PF17820 PDZ domain LN246_03880 PF04023 FeoA domain LN246_03885 PF07664 Ferrous iron transport protein B C terminus LN246_03885 PF07670 Nucleoside recognition LN246_03885 PF02421 Ferrous iron transport protein B LN246_03895 PF01066 CDP-alcohol phosphatidyltransferase LN246_03905 PF00701 Dihydrodipicolinate synthetase family LN246_03910 PF05193 Peptidase M16 inactive domain LN246_03910 PF00675 Insulinase (Peptidase family M16) LN246_03915 PF01180 Dihydroorotate dehydrogenase LN246_03925 PF00664 ABC transporter transmembrane region LN246_03925 PF00005 ABC transporter LN246_03930 PF01406 tRNA synthetases class I (C) catalytic domain LN246_03930 PF09190 DALR domain LN246_03935 PF03023 Lipid II flippase MurJ LN246_03985 PF01867 CRISPR associated protein Cas1 LN246_04000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LN246_04000 PF00989 PAS fold LN246_04000 PF08447 PAS fold LN246_04000 PF00512 His Kinase A (phospho-acceptor) domain LN246_04005 PF00072 Response regulator receiver domain LN246_04005 PF00486 Transcriptional regulatory protein, C terminal LN246_04010 PF07992 Pyridine nucleotide-disulphide oxidoreductase LN246_04025 PF00884 Sulfatase LN246_04030 PF07499 RuvA, C-terminal domain LN246_04030 PF01330 RuvA N terminal domain LN246_04035 PF01476 LysM domain LN246_04035 PF00877 NlpC/P60 family LN246_04070 PF01225 Mur ligase family, catalytic domain LN246_04070 PF08245 Mur ligase middle domain LN246_04070 PF02875 Mur ligase family, glutamate ligase domain LN246_04105 PF07992 Pyridine nucleotide-disulphide oxidoreductase LN246_04120 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LN246_04120 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LN246_04145 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LN246_04150 PF17863 AAA lid domain LN246_04150 PF07726 ATPase family associated with various cellular activities (AAA) LN246_04160 PF03881 Fructosamine kinase LN246_04165 PF00578 AhpC/TSA family LN246_04180 PF08402 TOBE domain LN246_04180 PF00005 ABC transporter LN246_04200 PF00753 Metallo-beta-lactamase superfamily LN246_04205 PF02785 Biotin carboxylase C-terminal domain LN246_04205 PF00289 Biotin carboxylase, N-terminal domain LN246_04205 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LN246_04220 PF01425 Amidase LN246_04225 PF01425 Amidase LN246_04230 PF03831 PhnA domain LN246_04230 PF08274 PhnA Zinc-Ribbon LN246_04245 PF01645 Conserved region in glutamate synthase LN246_04245 PF04898 Glutamate synthase central domain LN246_04245 PF00310 Glutamine amidotransferases class-II LN246_04245 PF01493 GXGXG motif LN246_04255 PF17848 Acetyl-coA carboxylase zinc finger domain LN246_04255 PF01039 Carboxyl transferase domain LN246_04260 PF02581 Thiamine monophosphate synthase LN246_04295 PF01702 Queuine tRNA-ribosyltransferase LN246_04305 PF01761 3-dehydroquinate synthase LN246_04315 PF00919 Uncharacterized protein family UPF0004 LN246_04315 PF04055 Radical SAM superfamily LN246_04320 PF17862 AAA+ lid domain LN246_04320 PF06480 FtsH Extracellular LN246_04320 PF01434 Peptidase family M41 LN246_04320 PF00004 ATPase family associated with various cellular activities (AAA) LN246_04330 PF00293 NUDIX domain LN246_04330 PF13344 Haloacid dehalogenase-like hydrolase LN246_04340 PF00106 short chain dehydrogenase LN246_04350 PF00994 Probable molybdopterin binding domain LN246_04365 PF00696 Amino acid kinase family LN246_04390 PF07568 Histidine kinase LN246_04390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LN246_04390 PF12282 Signal transduction histidine kinase LN246_04410 PF07732 Multicopper oxidase LN246_04410 PF07731 Multicopper oxidase LN246_04415 PF00561 alpha/beta hydrolase fold LN246_04425 PF00155 Aminotransferase class I and II LN246_04445 PF00005 ABC transporter LN246_04450 PF12833 Helix-turn-helix domain LN246_04455 PF00155 Aminotransferase class I and II LN246_04475 PF00916 Sulfate permease family LN246_04475 PF01740 STAS domain LN246_04480 PF12627 Probable RNA and SrmB- binding site of polymerase A LN246_04480 PF01743 Poly A polymerase head domain LN246_04480 PF01966 HD domain LN246_04485 PF00881 Nitroreductase family LN246_04490 PF03458 UPF0126 domain LN246_04515 PF06039 Malate:quinone oxidoreductase (Mqo) LN246_04535 PF00501 AMP-binding enzyme LN246_04535 PF13193 AMP-binding enzyme C-terminal domain LN246_04545 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LN246_04545 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LN246_04555 PF10371 Domain of unknown function LN246_04555 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II LN246_04555 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase LN246_04555 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg LN246_04555 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LN246_04560 PF00271 Helicase conserved C-terminal domain LN246_04560 PF08482 ATP-dependent helicase C-terminal LN246_04560 PF04408 Helicase associated domain (HA2) LN246_04560 PF00270 DEAD/DEAH box helicase LN246_04565 PF00171 Aldehyde dehydrogenase family LN246_04570 PF06865 Pyrimidine/purine nucleoside phosphorylase LN246_04575 PF03807 NADP oxidoreductase coenzyme F420-dependent LN246_04575 PF14748 Pyrroline-5-carboxylate reductase dimerisation LN246_04580 PF00696 Amino acid kinase family LN246_04585 PF00171 Aldehyde dehydrogenase family LN246_04640 PF01613 Flavin reductase like domain LN246_04645 PF01451 Low molecular weight phosphotyrosine protein phosphatase LN246_04655 PF18030 RimK PreATP-grasp domain LN246_04655 PF08443 RimK-like ATP-grasp domain LN246_04665 PF00246 Zinc carboxypeptidase LN246_04675 PF02590 Predicted SPOUT methyltransferase LN246_04680 PF01258 Prokaryotic dksA/traR C4-type zinc finger LN246_04690 PF01207 Dihydrouridine synthase (Dus) LN246_04695 PF01925 Sulfite exporter TauE/SafE LN246_04700 PF17755 UvrA DNA-binding domain LN246_04700 PF17760 UvrA interaction domain LN246_04700 PF00005 ABC transporter LN246_04710 PF01367 5'-3' exonuclease, C-terminal SAM fold LN246_04710 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LN246_04710 PF00476 DNA polymerase family A LN246_04710 PF01612 3'-5' exonuclease LN246_04740 PF05140 ResB-like family LN246_04740 PF01578 Cytochrome C assembly protein LN246_04755 PF01894 Uncharacterised protein family UPF0047 LN246_04770 PF13180 PDZ domain LN246_04775 PF00535 Glycosyl transferase family 2 LN246_04785 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase LN246_04795 PF01142 tRNA pseudouridine synthase D (TruD) LN246_04815 PF00708 Acylphosphatase LN246_04835 PF00274 Fructose-bisphosphate aldolase class-I LN246_04905 PF01625 Peptide methionine sulfoxide reductase LN246_04910 PF00085 Thioredoxin LN246_04915 PF00486 Transcriptional regulatory protein, C terminal LN246_04915 PF00072 Response regulator receiver domain LN246_04920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LN246_04955 PF02082 Transcriptional regulator LN246_04960 PF01053 Cys/Met metabolism PLP-dependent enzyme LN246_04985 PF00005 ABC transporter LN246_04985 PF02687 FtsX-like permease family LN246_04985 PF12704 MacB-like periplasmic core domain LN246_04990 PF12704 MacB-like periplasmic core domain LN246_04990 PF02687 FtsX-like permease family LN246_04990 PF00005 ABC transporter LN246_05010 PF01979 Amidohydrolase family LN246_05015 PF01220 Dehydroquinase class II LN246_05020 PF01321 Creatinase/Prolidase N-terminal domain LN246_05020 PF00557 Metallopeptidase family M24 LN246_05025 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LN246_05030 PF00448 SRP54-type protein, GTPase domain LN246_05050 PF14572 Phosphoribosyl synthetase-associated domain LN246_05050 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LN246_05055 PF00009 Elongation factor Tu GTP binding domain LN246_05055 PF03144 Elongation factor Tu domain 2 LN246_05055 PF06421 GTP-binding protein LepA C-terminus LN246_05055 PF00679 Elongation factor G C-terminus LN246_05070 PF02322 Cytochrome bd terminal oxidase subunit II LN246_05075 PF01654 Cytochrome bd terminal oxidase subunit I LN246_05085 PF02001 Protein of unknown function DUF134 LN246_05110 PF00133 tRNA synthetases class I (I, L, M and V) LN246_05110 PF01588 Putative tRNA binding domain LN246_05110 PF09334 tRNA synthetases class I (M) LN246_05120 PF01541 GIY-YIG catalytic domain LN246_05130 PF00440 Bacterial regulatory proteins, tetR family LN246_05130 PF16925 Tetracyclin repressor-like, C-terminal domain LN246_05155 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain LN246_05160 PF03205 Molybdopterin guanine dinucleotide synthesis protein B LN246_05170 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain LN246_05170 PF01464 Transglycosylase SLT domain LN246_05175 PF02325 YGGT family LN246_05180 PF00749 tRNA synthetases class I (E and Q), catalytic domain LN246_05185 PF00749 tRNA synthetases class I (E and Q), catalytic domain LN246_05185 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain LN246_05190 PF01161 Phosphatidylethanolamine-binding protein LN246_05210 PF00929 Exonuclease LN246_05225 PF02666 Phosphatidylserine decarboxylase LN246_05235 PF13419 Haloacid dehalogenase-like hydrolase LN246_05245 PF00248 Aldo/keto reductase family LN246_05255 PF01797 Transposase IS200 like LN246_05265 PF03372 Endonuclease/Exonuclease/phosphatase family LN246_05290 PF13520 Amino acid permease LN246_05315 PF04264 YceI-like domain LN246_05330 PF17954 Quercetinase C-terminal cupin domain LN246_05330 PF02678 Pirin LN246_05335 PF01594 AI-2E family transporter LN246_05345 PF02938 GAD domain LN246_05345 PF01336 OB-fold nucleic acid binding domain LN246_05345 PF00152 tRNA synthetases class II (D, K and N) LN246_05350 PF05661 Protein of unknown function (DUF808) LN246_05365 PF01553 Acyltransferase LN246_05365 PF00501 AMP-binding enzyme LN246_05375 PF08267 Cobalamin-independent synthase, N-terminal domain LN246_05375 PF01717 Cobalamin-independent synthase, Catalytic domain LN246_05385 PF01513 ATP-NAD kinase LN246_05390 PF13476 AAA domain LN246_05395 PF03707 Bacterial signalling protein N terminal repeat LN246_05395 PF00990 Diguanylate cyclase, GGDEF domain LN246_05395 PF00563 EAL domain LN246_05465 PF02040 Arsenical pump membrane protein LN246_05475 PF01451 Low molecular weight phosphotyrosine protein phosphatase LN246_05495 PF11412 Disulphide bond corrector protein DsbC LN246_05495 PF02683 Cytochrome C biogenesis protein transmembrane region LN246_05495 PF00085 Thioredoxin LN246_05525 PF01022 Bacterial regulatory protein, arsR family LN246_05530 PF00817 impB/mucB/samB family LN246_05530 PF11799 impB/mucB/samB family C-terminal domain LN246_05530 PF11798 IMS family HHH motif LN246_05535 PF03824 High-affinity nickel-transport protein LN246_05540 PF00950 ABC 3 transport family LN246_05545 PF00005 ABC transporter LN246_05550 PF01297 Zinc-uptake complex component A periplasmic LN246_05565 PF01588 Putative tRNA binding domain LN246_05570 PF03306 Alpha-acetolactate decarboxylase LN246_05590 PF06071 Protein of unknown function (DUF933) LN246_05590 PF01926 50S ribosome-binding GTPase LN246_05595 PF00672 HAMP domain LN246_05595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LN246_05595 PF01627 Hpt domain LN246_05595 PF00072 Response regulator receiver domain LN246_05595 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LN246_05595 PF00512 His Kinase A (phospho-acceptor) domain LN246_05600 PF01814 Hemerythrin HHE cation binding domain LN246_05605 PF00883 Cytosol aminopeptidase family, catalytic domain LN246_05605 PF02789 Cytosol aminopeptidase family, N-terminal domain LN246_05610 PF00291 Pyridoxal-phosphate dependent enzyme LN246_05615 PF00156 Phosphoribosyl transferase domain LN246_05655 PF02502 Ribose/Galactose Isomerase LN246_05660 PF10502 Signal peptidase, peptidase S26 LN246_05665 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LN246_05665 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LN246_05685 PF03061 Thioesterase superfamily LN246_05700 PF08443 RimK-like ATP-grasp domain LN246_05700 PF18030 RimK PreATP-grasp domain LN246_05715 PF12795 Mechanosensitive ion channel porin domain LN246_05715 PF12794 Mechanosensitive ion channel inner membrane domain 1 LN246_05715 PF00924 Mechanosensitive ion channel LN246_05735 PF00141 Peroxidase LN246_05740 PF02951 Prokaryotic glutathione synthetase, N-terminal domain LN246_05740 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain LN246_05750 PF04055 Radical SAM superfamily LN246_05750 PF08497 Radical SAM N-terminal LN246_05755 PF00004 ATPase family associated with various cellular activities (AAA) LN246_05755 PF17862 AAA+ lid domain LN246_05755 PF06480 FtsH Extracellular LN246_05755 PF01434 Peptidase family M41 LN246_05760 PF06167 Glucose-regulated metallo-peptidase M90 LN246_05765 PF00034 Cytochrome c LN246_05765 PF03150 Di-haem cytochrome c peroxidase LN246_05770 PF01966 HD domain LN246_05770 PF00672 HAMP domain LN246_05780 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 LN246_05785 PF09962 Uncharacterized conserved protein (DUF2196) LN246_05810 PF06738 Putative threonine/serine exporter LN246_05845 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LN246_05860 PF07690 Major Facilitator Superfamily LN246_05880 PF00270 DEAD/DEAH box helicase LN246_05880 PF00271 Helicase conserved C-terminal domain LN246_05885 PF00990 Diguanylate cyclase, GGDEF domain LN246_05885 PF00563 EAL domain LN246_05885 PF03707 Bacterial signalling protein N terminal repeat LN246_05915 PF02568 Thiamine biosynthesis protein (ThiI) LN246_05915 PF02926 THUMP domain LN246_05920 PF03641 Possible lysine decarboxylase LN246_05925 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LN246_05925 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LN246_05930 PF00690 Cation transporter/ATPase, N-terminus LN246_05930 PF00689 Cation transporting ATPase, C-terminus LN246_05935 PF10996 Beta-Casp domain LN246_05935 PF00753 Metallo-beta-lactamase superfamily LN246_05935 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LN246_05940 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LN246_05940 PF02896 PEP-utilising enzyme, TIM barrel domain LN246_05940 PF00391 PEP-utilising enzyme, mobile domain LN246_05980 PF01699 Sodium/calcium exchanger protein LN246_05985 PF02130 Uncharacterized protein family UPF0054 LN246_05990 PF06508 Queuosine biosynthesis protein QueC LN246_06020 PF08032 RNA 2'-O ribose methyltransferase substrate binding LN246_06020 PF00588 SpoU rRNA Methylase family LN246_06025 PF03480 Bacterial extracellular solute-binding protein, family 7 LN246_06040 PF13654 AAA domain LN246_06040 PF05362 Lon protease (S16) C-terminal proteolytic domain LN246_06055 PF02146 Sir2 family LN246_06100 PF00005 ABC transporter LN246_06115 PF00925 GTP cyclohydrolase II LN246_06140 PF02754 Cysteine-rich domain LN246_06145 PF13085 2Fe-2S iron-sulfur cluster binding domain LN246_06145 PF13237 4Fe-4S dicluster domain LN246_06150 PF00890 FAD binding domain LN246_06150 PF02910 Fumarate reductase flavoprotein C-term LN246_06170 PF02163 Peptidase family M50 LN246_06170 PF00571 CBS domain LN246_06185 PF00689 Cation transporting ATPase, C-terminus LN246_06185 PF00690 Cation transporter/ATPase, N-terminus LN246_06190 PF00004 ATPase family associated with various cellular activities (AAA) LN246_06190 PF17862 AAA+ lid domain LN246_06190 PF06480 FtsH Extracellular LN246_06190 PF01434 Peptidase family M41 LN246_06195 PF12105 SpoU, rRNA methylase, C-terminal LN246_06195 PF00588 SpoU rRNA Methylase family LN246_06235 PF01740 STAS domain LN246_06235 PF00916 Sulfate permease family LN246_06245 PF03707 Bacterial signalling protein N terminal repeat LN246_06245 PF00563 EAL domain LN246_06245 PF00990 Diguanylate cyclase, GGDEF domain LN246_06255 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LN246_06255 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LN246_06255 PF02142 MGS-like domain LN246_06270 PF10431 C-terminal, D2-small domain, of ClpB protein LN246_06270 PF07724 AAA domain (Cdc48 subfamily) LN246_06270 PF06689 ClpX C4-type zinc finger LN246_06275 PF00132 Bacterial transferase hexapeptide (six repeats) LN246_06275 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LN246_06280 PF07977 FabA-like domain LN246_06295 PF00795 Carbon-nitrogen hydrolase LN246_06295 PF02540 NAD synthase LN246_06300 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LN246_06305 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LN246_06380 PF02920 DNA binding domain of tn916 integrase LN246_06380 PF00589 Phage integrase family LN246_06395 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LN246_06410 PF06719 AraC-type transcriptional regulator N-terminus LN246_06410 PF12833 Helix-turn-helix domain LN246_06415 PF00107 Zinc-binding dehydrogenase LN246_06415 PF08240 Alcohol dehydrogenase GroES-like domain LN246_06455 PF00465 Iron-containing alcohol dehydrogenase LN246_06460 PF00117 Glutamine amidotransferase class-I LN246_06460 PF00958 GMP synthase C terminal domain LN246_06460 PF02540 NAD synthase LN246_06475 PF07690 Major Facilitator Superfamily LN246_06480 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LN246_06490 PF01142 tRNA pseudouridine synthase D (TruD) LN246_06500 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LN246_06515 PF00580 UvrD/REP helicase N-terminal domain LN246_06515 PF13361 UvrD-like helicase C-terminal domain LN246_06520 PF00313 'Cold-shock' DNA-binding domain LN246_06525 PF01026 TatD related DNase LN246_06535 PF03330 Lytic transglycolase LN246_06535 PF05036 Sporulation related domain LN246_06540 PF00475 Imidazoleglycerol-phosphate dehydratase LN246_06560 PF01926 50S ribosome-binding GTPase LN246_06565 PF00583 Acetyltransferase (GNAT) family LN246_06565 PF14698 Argininosuccinate lyase C-terminal LN246_06565 PF00206 Lyase LN246_06575 PF03717 Penicillin-binding Protein dimerisation domain LN246_06575 PF00905 Penicillin binding protein transpeptidase domain LN246_06590 PF01032 FecCD transport family LN246_06595 PF00005 ABC transporter LN246_06605 PF01209 ubiE/COQ5 methyltransferase family LN246_06620 PF01497 Periplasmic binding protein LN246_06625 PF00296 Luciferase-like monooxygenase LN246_06630 PF01618 MotA/TolQ/ExbB proton channel family LN246_06635 PF02472 Biopolymer transport protein ExbD/TolR LN246_06640 PF07715 TonB-dependent Receptor Plug Domain LN246_06640 PF00593 TonB dependent receptor LN246_06650 PF01497 Periplasmic binding protein LN246_06655 PF13649 Methyltransferase domain LN246_06760 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LN246_06760 PF00925 GTP cyclohydrolase II LN246_06765 PF07730 Histidine kinase LN246_06765 PF17200 Single Cache domain 2 LN246_06770 PF00072 Response regulator receiver domain LN246_06770 PF00486 Transcriptional regulatory protein, C terminal LN246_06780 PF04341 Protein of unknown function, DUF485 LN246_06785 PF00474 Sodium:solute symporter family LN246_06795 PF11490 DNA polymerase III polC-type N-terminus II LN246_06795 PF07733 Bacterial DNA polymerase III alpha NTPase domain LN246_06795 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LN246_06795 PF14579 Helix-hairpin-helix motif LN246_06795 PF02811 PHP domain LN246_06795 PF00929 Exonuclease LN246_06800 PF16177 Acetyl-coenzyme A synthetase N-terminus LN246_06800 PF00501 AMP-binding enzyme LN246_06800 PF13193 AMP-binding enzyme C-terminal domain LN246_06815 PF07995 Glucose / Sorbosone dehydrogenase LN246_06840 PF01645 Conserved region in glutamate synthase LN246_06855 PF08274 PhnA Zinc-Ribbon LN246_06855 PF03831 PhnA domain LN246_06860 PF13419 Haloacid dehalogenase-like hydrolase LN246_06865 PF13419 Haloacid dehalogenase-like hydrolase LN246_06875 PF03702 Anhydro-N-acetylmuramic acid kinase LN246_06880 PF01636 Phosphotransferase enzyme family LN246_06885 PF01797 Transposase IS200 like LN246_06895 PF00483 Nucleotidyl transferase LN246_06925 PF00440 Bacterial regulatory proteins, tetR family LN246_06930 PF00581 Rhodanese-like domain LN246_06955 PF00270 DEAD/DEAH box helicase LN246_06955 PF00271 Helicase conserved C-terminal domain LN246_06965 PF00270 DEAD/DEAH box helicase LN246_06965 PF08148 DSHCT (NUC185) domain LN246_06965 PF00271 Helicase conserved C-terminal domain LN246_06975 PF01734 Patatin-like phospholipase LN246_06975 PF00027 Cyclic nucleotide-binding domain LN246_06995 PF03824 High-affinity nickel-transport protein LN246_07010 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LN246_07020 PF00665 Integrase core domain LN246_07030 PF13378 Enolase C-terminal domain-like LN246_07030 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LN246_07045 PF17773 UPF0176 acylphosphatase like domain LN246_07055 PF01661 Macro domain LN246_07070 PF01784 NIF3 (NGG1p interacting factor 3) LN246_07085 PF11146 Protein of unknown function (DUF2905) LN246_07090 PF01066 CDP-alcohol phosphatidyltransferase LN246_07095 PF00753 Metallo-beta-lactamase superfamily LN246_07100 PF00689 Cation transporting ATPase, C-terminus LN246_07100 PF00690 Cation transporter/ATPase, N-terminus LN246_07110 PF17874 MalT-like TPR region LN246_07110 PF00196 Bacterial regulatory proteins, luxR family LN246_07120 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LN246_07120 PF00753 Metallo-beta-lactamase superfamily LN246_07120 PF10996 Beta-Casp domain LN246_07195 PF03372 Endonuclease/Exonuclease/phosphatase family LN246_07225 PF03553 Na+/H+ antiporter family LN246_07235 PF02773 S-adenosylmethionine synthetase, C-terminal domain LN246_07235 PF00438 S-adenosylmethionine synthetase, N-terminal domain LN246_07235 PF02772 S-adenosylmethionine synthetase, central domain LN246_07245 PF13520 Amino acid permease LN246_07250 PF02684 Lipid-A-disaccharide synthetase LN246_07255 PF02677 Epoxyqueuosine reductase QueH LN246_07275 PF13519 von Willebrand factor type A domain LN246_07285 PF17863 AAA lid domain LN246_07285 PF07726 ATPase family associated with various cellular activities (AAA) LN246_07290 PF01882 Protein of unknown function DUF58 LN246_07295 PF01914 MarC family integral membrane protein LN246_07315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LN246_07315 PF08447 PAS fold LN246_07320 PF04011 LemA family LN246_07330 PF00437 Type II/IV secretion system protein LN246_07335 PF10431 C-terminal, D2-small domain, of ClpB protein LN246_07335 PF02861 Clp amino terminal domain, pathogenicity island component LN246_07335 PF07724 AAA domain (Cdc48 subfamily) LN246_07335 PF17871 AAA lid domain LN246_07335 PF00004 ATPase family associated with various cellular activities (AAA) LN246_07340 PF13180 PDZ domain LN246_07340 PF03572 Peptidase family S41 LN246_07345 PF01259 SAICAR synthetase LN246_07350 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase LN246_07365 PF01553 Acyltransferase LN246_07370 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LN246_07380 PF00999 Sodium/hydrogen exchanger family LN246_07400 PF00034 Cytochrome c LN246_07405 PF00872 Transposase, Mutator family LN246_07410 PF01022 Bacterial regulatory protein, arsR family LN246_07430 PF00072 Response regulator receiver domain LN246_07430 PF00486 Transcriptional regulatory protein, C terminal LN246_07435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LN246_07450 PF00270 DEAD/DEAH box helicase LN246_07450 PF00271 Helicase conserved C-terminal domain LN246_07460 PF01595 Cyclin M transmembrane N-terminal domain LN246_07460 PF00571 CBS domain LN246_07460 PF03471 Transporter associated domain LN246_07465 PF03448 MgtE intracellular N domain LN246_07465 PF01769 Divalent cation transporter LN246_07465 PF00571 CBS domain LN246_07475 PF01293 Phosphoenolpyruvate carboxykinase LN246_07480 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit LN246_07485 PF00682 HMGL-like LN246_07485 PF02436 Conserved carboxylase domain LN246_07485 PF00364 Biotin-requiring enzyme LN246_07495 PF00271 Helicase conserved C-terminal domain LN246_07495 PF00270 DEAD/DEAH box helicase LN246_07500 PF02673 Bacitracin resistance protein BacA LN246_07505 PF00664 ABC transporter transmembrane region LN246_07505 PF00005 ABC transporter LN246_07520 PF01541 GIY-YIG catalytic domain LN246_07525 PF00085 Thioredoxin LN246_07530 PF12823 Domain of unknown function (DUF3817) LN246_07535 PF09335 SNARE associated Golgi protein LN246_07545 PF01118 Semialdehyde dehydrogenase, NAD binding domain LN246_07545 PF02774 Semialdehyde dehydrogenase, dimerisation domain LN246_07550 PF01272 Transcription elongation factor, GreA/GreB, C-term LN246_07550 PF03449 Transcription elongation factor, N-terminal LN246_07555 PF01975 Survival protein SurE LN246_07560 PF00899 ThiF family LN246_07580 PF06965 Na+/H+ antiporter 1 LN246_07585 PF10458 Valyl tRNA synthetase tRNA binding arm LN246_07585 PF00133 tRNA synthetases class I (I, L, M and V) LN246_07585 PF08264 Anticodon-binding domain of tRNA LN246_07620 PF00011 Hsp20/alpha crystallin family LN246_07625 PF00144 Beta-lactamase LN246_07625 PF11954 Domain of unknown function (DUF3471) LN246_07640 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal LN246_07640 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LN246_07640 PF10518 TAT (twin-arginine translocation) pathway signal sequence LN246_07645 PF00374 Nickel-dependent hydrogenase LN246_07655 PF02492 CobW/HypB/UreG, nucleotide-binding domain LN246_07660 PF01455 HupF/HypC family LN246_07665 PF01924 Hydrogenase formation hypA family LN246_07670 PF00586 AIR synthase related protein, N-terminal domain LN246_07670 PF02769 AIR synthase related protein, C-terminal domain LN246_07675 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA LN246_07680 PF01750 Hydrogenase maturation protease LN246_07685 PF07503 HypF finger LN246_07685 PF17788 HypF Kae1-like domain LN246_07685 PF01300 Telomere recombination LN246_07685 PF00708 Acylphosphatase LN246_07690 PF03167 Uracil DNA glycosylase superfamily LN246_07695 PF03459 TOBE domain LN246_07700 PF16177 Acetyl-coenzyme A synthetase N-terminus LN246_07700 PF00501 AMP-binding enzyme LN246_07700 PF13193 AMP-binding enzyme C-terminal domain LN246_07710 PF01875 Memo-like protein LN246_07745 PF00202 Aminotransferase class-III LN246_07755 PF03466 LysR substrate binding domain LN246_07755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LN246_07760 PF01557 Fumarylacetoacetate (FAA) hydrolase family LN246_07775 PF00486 Transcriptional regulatory protein, C terminal LN246_07775 PF00072 Response regulator receiver domain LN246_07805 PF00194 Eukaryotic-type carbonic anhydrase LN246_07810 PF00850 Histone deacetylase domain LN246_07840 PF02470 MlaD protein LN246_07845 PF04403 Paraquat-inducible protein A LN246_07855 PF00781 Diacylglycerol kinase catalytic domain LN246_07870 PF04299 Putative FMN-binding domain LN246_07880 PF00583 Acetyltransferase (GNAT) family LN246_07895 PF02689 Helicase LN246_07895 PF05970 PIF1-like helicase LN246_07905 PF00924 Mechanosensitive ion channel LN246_07905 PF05552 Conserved TM helix LN246_07925 PF00313 'Cold-shock' DNA-binding domain LN246_07930 PF01863 Protein of unknown function DUF45 LN246_07940 PF13406 Transglycosylase SLT domain LN246_07945 PF00990 Diguanylate cyclase, GGDEF domain LN246_07945 PF00563 EAL domain LN246_07945 PF03707 Bacterial signalling protein N terminal repeat LN246_07950 PF03459 TOBE domain LN246_07950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LN246_07955 PF01047 MarR family LN246_07960 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LN246_07965 PF00873 AcrB/AcrD/AcrF family LN246_07970 PF02321 Outer membrane efflux protein LN246_07985 PF08443 RimK-like ATP-grasp domain LN246_07985 PF18030 RimK PreATP-grasp domain LN246_07995 PF03061 Thioesterase superfamily LN246_08000 PF01475 Ferric uptake regulator family LN246_08015 PF07715 TonB-dependent Receptor Plug Domain LN246_08015 PF00593 TonB dependent receptor LN246_08020 PF03544 Gram-negative bacterial TonB protein C-terminal LN246_08025 PF01618 MotA/TolQ/ExbB proton channel family LN246_08030 PF02472 Biopolymer transport protein ExbD/TolR LN246_08035 PF00258 Flavodoxin LN246_08070 PF00330 Aconitase family (aconitate hydratase) LN246_08070 PF06434 Aconitate hydratase 2 N-terminus LN246_08070 PF11791 Aconitate B N-terminal domain LN246_08075 PF09397 Ftsk gamma domain LN246_08075 PF01580 FtsK/SpoIIIE family LN246_08075 PF17854 FtsK alpha domain LN246_08100 PF02441 Flavoprotein LN246_08105 PF01467 Cytidylyltransferase-like LN246_08110 PF02223 Thymidylate kinase LN246_08115 PF03129 Anticodon binding domain LN246_08115 PF13393 Histidyl-tRNA synthetase LN246_08135 PF00005 ABC transporter LN246_08140 PF02405 Permease MlaE LN246_08145 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LN246_08145 PF17944 Arginine decarboxylase C-terminal helical extension LN246_08145 PF17810 Arginine decarboxylase helical bundle domain LN246_08150 PF00132 Bacterial transferase hexapeptide (six repeats) LN246_08155 PF00155 Aminotransferase class I and II LN246_08170 PF16653 Saccharopine dehydrogenase C-terminal domain LN246_08170 PF03435 Saccharopine dehydrogenase NADP binding domain LN246_08180 PF02578 Multi-copper polyphenol oxidoreductase laccase LN246_08185 PF01098 Cell cycle protein LN246_08235 PF00270 DEAD/DEAH box helicase LN246_08235 PF00271 Helicase conserved C-terminal domain LN246_08235 PF00570 HRDC domain LN246_08235 PF16124 RecQ zinc-binding LN246_08235 PF09382 RQC domain LN246_08295 PF06397 Desulfoferrodoxin, N-terminal domain LN246_08295 PF01880 Desulfoferrodoxin LN246_08345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LN246_08345 PF12282 Signal transduction histidine kinase LN246_08345 PF07568 Histidine kinase LN246_08350 PF00072 Response regulator receiver domain LN246_08360 PF03960 ArsC family LN246_08380 PF00158 Sigma-54 interaction domain LN246_08380 PF02954 Bacterial regulatory protein, Fis family LN246_08385 PF04891 NifQ LN246_08390 PF00258 Flavodoxin LN246_08390 PF00753 Metallo-beta-lactamase superfamily LN246_08410 PF08534 Redoxin LN246_08415 PF02954 Bacterial regulatory protein, Fis family LN246_08415 PF01590 GAF domain LN246_08415 PF00158 Sigma-54 interaction domain LN246_08420 PF06988 NifT/FixU protein LN246_08425 PF00890 FAD binding domain LN246_08425 PF02910 Fumarate reductase flavoprotein C-term LN246_08430 PF00248 Aldo/keto reductase family LN246_08435 PF04324 BFD-like [2Fe-2S] binding domain LN246_08435 PF01592 NifU-like N terminal domain LN246_08435 PF01106 NifU-like domain LN246_08440 PF00543 Nitrogen regulatory protein P-II LN246_08450 PF04963 Sigma-54 factor, core binding domain LN246_08450 PF04552 Sigma-54, DNA binding domain LN246_08450 PF00309 Sigma-54 factor, Activator interacting domain (AID) LN246_08455 PF00111 2Fe-2S iron-sulfur cluster binding domain LN246_08460 PF00111 2Fe-2S iron-sulfur cluster binding domain LN246_08460 PF00175 Oxidoreductase NAD-binding domain LN246_08460 PF00970 Oxidoreductase FAD-binding domain LN246_08470 PF03206 Nitrogen fixation protein NifW LN246_08475 PF00258 Flavodoxin LN246_08480 PF03270 Protein of unknown function, DUF269 LN246_08485 PF02579 Dinitrogenase iron-molybdenum cofactor LN246_08490 PF00148 Nitrogenase component 1 type Oxidoreductase LN246_08495 PF00148 Nitrogenase component 1 type Oxidoreductase LN246_08510 PF00248 Aldo/keto reductase family LN246_08540 PF02190 ATP-dependent protease La (LON) substrate-binding domain LN246_08540 PF05362 Lon protease (S16) C-terminal proteolytic domain LN246_08540 PF00004 ATPase family associated with various cellular activities (AAA) LN246_08550 PF13344 Haloacid dehalogenase-like hydrolase LN246_08580 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LN246_08580 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LN246_08600 PF00148 Nitrogenase component 1 type Oxidoreductase LN246_08600 PF11844 Domain of unknown function (DUF3364) LN246_08605 PF00148 Nitrogenase component 1 type Oxidoreductase LN246_08615 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family LN246_08620 PF00313 'Cold-shock' DNA-binding domain LN246_08645 PF00999 Sodium/hydrogen exchanger family LN246_08645 PF02254 TrkA-N domain LN246_08675 PF00682 HMGL-like LN246_08680 PF02579 Dinitrogenase iron-molybdenum cofactor LN246_08680 PF04055 Radical SAM superfamily LN246_08700 PF00574 Clp protease LN246_08705 PF10431 C-terminal, D2-small domain, of ClpB protein LN246_08705 PF06689 ClpX C4-type zinc finger LN246_08705 PF07724 AAA domain (Cdc48 subfamily) LN246_08715 PF00266 Aminotransferase class-V LN246_08735 PF01810 LysE type translocator LN246_08755 PF00037 4Fe-4S binding domain LN246_08770 PF00037 4Fe-4S binding domain LN246_08800 PF01081 KDPG and KHG aldolase LN246_08805 PF00920 Dehydratase family LN246_08810 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LN246_08815 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LN246_08815 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LN246_08820 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LN246_08820 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LN246_08820 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LN246_08820 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LN246_08825 PF00483 Nucleotidyl transferase LN246_08830 PF00128 Alpha amylase, catalytic domain LN246_08840 PF13660 Domain of unknown function (DUF4147) LN246_08840 PF05161 MOFRL family LN246_08875 PF00005 ABC transporter LN246_08880 PF13533 Biotin-lipoyl like LN246_08885 PF00583 Acetyltransferase (GNAT) family LN246_08885 PF13380 CoA binding domain LN246_08885 PF13607 Succinyl-CoA ligase like flavodoxin domain LN246_08900 PF02659 Putative manganese efflux pump LN246_08910 PF01965 DJ-1/PfpI family LN246_08925 PF11700 Vacuole effluxer Atg22 like LN246_08930 PF03009 Glycerophosphoryl diester phosphodiesterase family LN246_08945 PF03441 FAD binding domain of DNA photolyase LN246_08945 PF00875 DNA photolyase LN246_08950 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LN246_08950 PF01243 Pyridoxamine 5'-phosphate oxidase LN246_08960 PF07728 AAA domain (dynein-related subfamily) LN246_08960 PF12102 Domain of unknown function (DUF3578) LN246_09010 PF03734 L,D-transpeptidase catalytic domain LN246_09015 PF11066 Protein of unknown function (DUF2867) LN246_09015 PF13460 NAD(P)H-binding LN246_09030 PF03109 ABC1 family LN246_09040 PF00106 short chain dehydrogenase LN246_09045 PF01047 MarR family LN246_09050 PF08212 Lipocalin-like domain LN246_09065 PF00255 Glutathione peroxidase LN246_09070 PF01370 NAD dependent epimerase/dehydratase family LN246_09070 PF08338 Domain of unknown function (DUF1731) LN246_09075 PF00440 Bacterial regulatory proteins, tetR family LN246_09075 PF17932 Tetracyclin repressor-like, C-terminal domain LN246_09085 PF13533 Biotin-lipoyl like LN246_09090 PF00873 AcrB/AcrD/AcrF family LN246_09095 PF01734 Patatin-like phospholipase LN246_09110 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II LN246_09110 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase LN246_09110 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg LN246_09115 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LN246_09120 PF13411 MerR HTH family regulatory protein LN246_09125 PF00226 DnaJ domain LN246_09125 PF01556 DnaJ C terminal domain LN246_09135 PF00588 SpoU rRNA Methylase family LN246_09135 PF08032 RNA 2'-O ribose methyltransferase substrate binding LN246_09150 PF01808 AICARFT/IMPCHase bienzyme LN246_09150 PF02142 MGS-like domain LN246_09160 PF00586 AIR synthase related protein, N-terminal domain LN246_09160 PF02769 AIR synthase related protein, C-terminal domain LN246_09160 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LN246_09180 PF10396 GTP-binding protein TrmE N-terminus LN246_09180 PF01926 50S ribosome-binding GTPase LN246_09180 PF12631 MnmE helical domain LN246_09190 PF02096 60Kd inner membrane protein LN246_09190 PF14849 YidC periplasmic domain LN246_09195 PF00825 Ribonuclease P LN246_09200 PF00468 Ribosomal protein L34 LN246_09210 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LN246_09215 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LN246_09215 PF00512 His Kinase A (phospho-acceptor) domain LN246_09215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LN246_09215 PF00672 HAMP domain LN246_09215 PF00072 Response regulator receiver domain LN246_09215 PF01627 Hpt domain LN246_09230 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LN246_09230 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LN246_09235 PF00520 Ion transport protein LN246_09235 PF00027 Cyclic nucleotide-binding domain LN246_09240 PF02934 GatB/GatE catalytic domain LN246_09240 PF02637 GatB domain LN246_09245 PF01343 Peptidase family S49 LN246_09250 PF02581 Thiamine monophosphate synthase LN246_09260 PF00119 ATP synthase A chain LN246_09270 PF12399 Branched-chain amino acid ATP-binding cassette transporter LN246_09270 PF00005 ABC transporter LN246_09275 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LN246_09280 PF02885 Glycosyl transferase family, helical bundle domain LN246_09280 PF00591 Glycosyl transferase family, a/b domain LN246_09295 PF14602 Hexapeptide repeat of succinyl-transferase LN246_09295 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle LN246_09305 PF02698 DUF218 domain LN246_09320 PF00593 TonB dependent receptor LN246_09320 PF07715 TonB-dependent Receptor Plug Domain LN246_09325 PF00953 Glycosyl transferase family 4 LN246_09330 PF02563 Polysaccharide biosynthesis/export protein LN246_09330 PF10531 SLBB domain LN246_09340 PF13614 AAA domain LN246_09350 PF01370 NAD dependent epimerase/dehydratase family LN246_09355 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LN246_09355 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LN246_09355 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LN246_09365 PF12704 MacB-like periplasmic core domain LN246_09365 PF00005 ABC transporter LN246_09365 PF02687 FtsX-like permease family LN246_09385 PF00563 EAL domain LN246_09385 PF03707 Bacterial signalling protein N terminal repeat LN246_09385 PF00990 Diguanylate cyclase, GGDEF domain LN246_09405 PF04055 Radical SAM superfamily LN246_09410 PF01966 HD domain LN246_09410 PF13286 Phosphohydrolase-associated domain LN246_09415 PF01208 Uroporphyrinogen decarboxylase (URO-D) LN246_09425 PF02774 Semialdehyde dehydrogenase, dimerisation domain LN246_09425 PF01118 Semialdehyde dehydrogenase, NAD binding domain LN246_09430 PF03989 DNA gyrase C-terminal domain, beta-propeller LN246_09430 PF00521 DNA gyrase/topoisomerase IV, subunit A LN246_09435 PF01618 MotA/TolQ/ExbB proton channel family LN246_09440 PF02472 Biopolymer transport protein ExbD/TolR LN246_09445 PF00085 Thioredoxin LN246_09450 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LN246_09455 PF01709 Transcriptional regulator LN246_09495 PF12848 ABC transporter LN246_09495 PF00005 ABC transporter LN246_09500 PF03960 ArsC family LN246_09505 PF03976 Polyphosphate kinase 2 (PPK2) LN246_09510 PF02646 RmuC family LN246_09515 PF03548 Outer membrane lipoprotein carrier protein LolA LN246_09520 PF07516 SecA Wing and Scaffold domain LN246_09520 PF02810 SEC-C motif LN246_09520 PF07517 SecA DEAD-like domain LN246_09520 PF01043 SecA preprotein cross-linking domain LN246_09535 PF02618 YceG-like family LN246_09555 PF00909 Ammonium Transporter Family LN246_09560 PF00543 Nitrogen regulatory protein P-II LN246_09565 PF00909 Ammonium Transporter Family LN246_09570 PF00543 Nitrogen regulatory protein P-II LN246_09575 PF00563 EAL domain LN246_09575 PF03707 Bacterial signalling protein N terminal repeat LN246_09575 PF00990 Diguanylate cyclase, GGDEF domain LN246_09580 PF01205 Uncharacterized protein family UPF0029 LN246_09580 PF09186 Domain of unknown function (DUF1949) LN246_09585 PF00762 Ferrochelatase LN246_09590 PF02348 Cytidylyltransferase LN246_09595 PF00482 Type II secretion system (T2SS), protein F LN246_09600 PF00437 Type II/IV secretion system protein LN246_09600 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LN246_09615 PF00263 Bacterial type II and III secretion system protein LN246_09615 PF03958 Bacterial type II/III secretion system short domain LN246_09635 PF07650 KH domain LN246_09635 PF01926 50S ribosome-binding GTPase LN246_09640 PF10431 C-terminal, D2-small domain, of ClpB protein LN246_09640 PF07724 AAA domain (Cdc48 subfamily) LN246_09645 PF00227 Proteasome subunit LN246_09650 PF03948 Ribosomal protein L9, C-terminal domain LN246_09650 PF01281 Ribosomal protein L9, N-terminal domain LN246_09655 PF01432 Peptidase family M3 LN246_09670 PF00764 Arginosuccinate synthase LN246_09685 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ LN246_09690 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LN246_09695 PF01476 LysM domain LN246_09695 PF08525 Opacity-associated protein A N-terminal motif LN246_09695 PF01551 Peptidase family M23 LN246_09720 PF09424 Yqey-like protein LN246_09725 PF00082 Subtilase family LN246_09730 PF00218 Indole-3-glycerol phosphate synthase LN246_09740 PF03692 Putative zinc- or iron-chelating domain LN246_09745 PF05175 Methyltransferase small domain LN246_09750 PF04377 Arginine-tRNA-protein transferase, C terminus LN246_09750 PF04376 Arginine-tRNA-protein transferase, N terminus LN246_09755 PF01266 FAD dependent oxidoreductase LN246_09755 PF05430 S-adenosyl-L-methionine-dependent methyltransferase LN246_09760 PF02092 Glycyl-tRNA synthetase beta subunit LN246_09775 PF00588 SpoU rRNA Methylase family LN246_09780 PF01842 ACT domain LN246_09780 PF00551 Formyl transferase LN246_09785 PF00180 Isocitrate/isopropylmalate dehydrogenase LN246_09790 PF00694 Aconitase C-terminal domain LN246_09795 PF04539 Sigma-70 region 3 LN246_09795 PF00140 Sigma-70 factor, region 1.2 LN246_09795 PF04542 Sigma-70 region 2 LN246_09795 PF04545 Sigma-70, region 4 LN246_09805 PF18146 Damage-inducible protein CinA KH domain LN246_09805 PF00994 Probable molybdopterin binding domain LN246_09805 PF02464 Competence-damaged protein LN246_09815 PF00719 Inorganic pyrophosphatase LN246_09835 PF01520 N-acetylmuramoyl-L-alanine amidase LN246_09840 PF01520 N-acetylmuramoyl-L-alanine amidase LN246_09840 PF11741 AMIN domain LN246_09845 PF03060 Nitronate monooxygenase LN246_09850 PF01479 S4 domain LN246_09850 PF00579 tRNA synthetases class I (W and Y) LN246_09855 PF13291 ACT domain LN246_09855 PF04607 Region found in RelA / SpoT proteins LN246_09855 PF02824 TGS domain LN246_09860 PF01192 RNA polymerase Rpb6 LN246_09865 PF00696 Amino acid kinase family LN246_09880 PF09383 NIL domain LN246_09880 PF00005 ABC transporter LN246_09885 PF02390 Putative methyltransferase LN246_09895 PF00849 RNA pseudouridylate synthase LN246_09895 PF01479 S4 domain LN246_09900 PF01171 PP-loop family LN246_09905 PF01048 Phosphorylase superfamily LN246_09910 PF00698 Acyl transferase domain LN246_09935 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LN246_09955 PF04052 TolB amino-terminal domain LN246_09960 PF00800 Prephenate dehydratase LN246_09975 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LN246_09975 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LN246_09985 PF02472 Biopolymer transport protein ExbD/TolR LN246_09990 PF01618 MotA/TolQ/ExbB proton channel family LN246_09995 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LN246_10000 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LN246_10000 PF02874 ATP synthase alpha/beta family, beta-barrel domain LN246_10005 PF00231 ATP synthase LN246_10010 PF02874 ATP synthase alpha/beta family, beta-barrel domain LN246_10010 PF00306 ATP synthase alpha/beta chain, C terminal domain LN246_10010 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LN246_10015 PF00213 ATP synthase delta (OSCP) subunit LN246_10020 PF00430 ATP synthase B/B' CF(0) LN246_10030 PF17762 HTH domain found in ParB protein LN246_10030 PF02195 ParB-like nuclease domain LN246_10035 PF13614 AAA domain LN246_10045 PF00551 Formyl transferase LN246_10045 PF02911 Formyl transferase, C-terminal domain LN246_10050 PF00696 Amino acid kinase family LN246_10055 PF01926 50S ribosome-binding GTPase LN246_10055 PF01018 GTP1/OBG LN246_10060 PF01016 Ribosomal L27 protein LN246_10065 PF00829 Ribosomal prokaryotic L21 protein LN246_10070 PF01042 Endoribonuclease L-PSP LN246_10080 PF00899 ThiF family LN246_10090 PF02609 Exonuclease VII small subunit LN246_10095 PF00561 alpha/beta hydrolase fold LN246_10100 PF01053 Cys/Met metabolism PLP-dependent enzyme LN246_10105 PF00478 IMP dehydrogenase / GMP reductase domain LN246_10105 PF00571 CBS domain LN246_10110 PF01425 Amidase LN246_10115 PF08264 Anticodon-binding domain of tRNA LN246_10115 PF00133 tRNA synthetases class I (I, L, M and V) LN246_10120 PF02464 Competence-damaged protein LN246_10120 PF00994 Probable molybdopterin binding domain LN246_10185 PF00815 Histidinol dehydrogenase LN246_10195 PF01116 Fructose-bisphosphate aldolase class-II LN246_10205 PF00639 PPIC-type PPIASE domain LN246_10210 PF10576 Iron-sulfur binding domain of endonuclease III LN246_10210 PF00633 Helix-hairpin-helix motif LN246_10210 PF00730 HhH-GPD superfamily base excision DNA repair protein LN246_10220 PF00665 Integrase core domain LN246_10225 PF03976 Polyphosphate kinase 2 (PPK2) LN246_10230 PF07687 Peptidase dimerisation domain LN246_10230 PF01546 Peptidase family M20/M25/M40 LN246_10245 PF00291 Pyridoxal-phosphate dependent enzyme LN246_10270 PF02310 B12 binding domain LN246_10270 PF02965 Vitamin B12 dependent methionine synthase, activation domain LN246_10270 PF00809 Pterin binding enzyme LN246_10270 PF02574 Homocysteine S-methyltransferase LN246_10270 PF02607 B12 binding domain LN246_10275 PF08447 PAS fold LN246_10275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LN246_10285 PF00132 Bacterial transferase hexapeptide (six repeats) LN246_10285 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LN246_10290 PF10369 Small subunit of acetolactate synthase LN246_10295 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LN246_10295 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LN246_10295 PF00205 Thiamine pyrophosphate enzyme, central domain LN246_10300 PF02541 Ppx/GppA phosphatase family LN246_10305 PF00291 Pyridoxal-phosphate dependent enzyme LN246_10305 PF13291 ACT domain LN246_10310 PF13380 CoA binding domain LN246_10315 PF13406 Transglycosylase SLT domain LN246_10320 PF05958 tRNA (Uracil-5-)-methyltransferase LN246_10325 PF00132 Bacterial transferase hexapeptide (six repeats) LN246_10325 PF12804 MobA-like NTP transferase domain LN246_10330 PF04127 DNA / pantothenate metabolism flavoprotein LN246_10330 PF02441 Flavoprotein LN246_10335 PF01255 Putative undecaprenyl diphosphate synthase LN246_10340 PF01478 Type IV leader peptidase family LN246_10340 PF06750 Bacterial Peptidase A24 N-terminal domain LN246_10350 PF01416 tRNA pseudouridine synthase LN246_10365 PF03653 Uncharacterised protein family (UPF0093) LN246_10375 PF06078 Bacterial protein of unknown function (DUF937) LN246_10380 PF17783 CvfB-like winged helix domain LN246_10380 PF13509 S1 domain LN246_10410 PF11412 Disulphide bond corrector protein DsbC LN246_10410 PF02683 Cytochrome C biogenesis protein transmembrane region LN246_10415 PF03190 Protein of unknown function, DUF255 LN246_10425 PF07556 Protein of unknown function (DUF1538) LN246_10440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LN246_10445 PF00072 Response regulator receiver domain LN246_10445 PF00486 Transcriptional regulatory protein, C terminal LN246_10460 PF01209 ubiE/COQ5 methyltransferase family LN246_10465 PF00012 Hsp70 protein LN246_10470 PF01025 GrpE LN246_10475 PF00312 Ribosomal protein S15 LN246_10480 PF02082 Transcriptional regulator LN246_10490 PF02132 RecR protein LN246_10490 PF13662 Toprim domain LN246_10500 PF00226 DnaJ domain LN246_10500 PF01556 DnaJ C terminal domain LN246_10500 PF00684 DnaJ central domain LN246_10505 PF01435 Peptidase family M48 LN246_10510 PF04011 LemA family LN246_10520 PF00210 Ferritin-like domain LN246_10525 PF02535 ZIP Zinc transporter LN246_10545 PF00216 Bacterial DNA-binding protein LN246_10565 PF00137 ATP synthase subunit C LN246_10570 PF00013 KH domain LN246_10570 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LN246_10570 PF01138 3' exoribonuclease family, domain 1 LN246_10570 PF03725 3' exoribonuclease family, domain 2 LN246_10570 PF00575 S1 RNA binding domain LN246_10580 PF01556 DnaJ C terminal domain LN246_10580 PF00684 DnaJ central domain LN246_10580 PF00226 DnaJ domain LN246_10585 PF04453 LPS transport system D LN246_10585 PF03968 OstA-like protein LN246_10595 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LN246_10595 PF02843 Phosphoribosylglycinamide synthetase, C domain LN246_10595 PF02844 Phosphoribosylglycinamide synthetase, N domain LN246_10605 PF01545 Cation efflux family LN246_10605 PF16916 Dimerisation domain of Zinc Transporter LN246_10610 PF03167 Uracil DNA glycosylase superfamily LN246_10615 PF00183 Hsp90 protein LN246_10630 PF00958 GMP synthase C terminal domain LN246_10630 PF02540 NAD synthase LN246_10630 PF00117 Glutamine amidotransferase class-I LN246_10635 PF03600 Citrate transporter LN246_10640 PF00890 FAD binding domain LN246_10650 PF01541 GIY-YIG catalytic domain LN246_10650 PF02151 UvrB/uvrC motif LN246_10650 PF08459 UvrC Helix-hairpin-helix N-terminal LN246_10655 PF08447 PAS fold LN246_10655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LN246_10665 PF00072 Response regulator receiver domain LN246_10665 PF01627 Hpt domain LN246_10665 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LN246_10665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LN246_10665 PF00672 HAMP domain LN246_10665 PF00512 His Kinase A (phospho-acceptor) domain LN246_10670 PF00990 Diguanylate cyclase, GGDEF domain LN246_10670 PF00072 Response regulator receiver domain LN246_10675 PF00004 ATPase family associated with various cellular activities (AAA) LN246_10675 PF05362 Lon protease (S16) C-terminal proteolytic domain LN246_10675 PF02190 ATP-dependent protease La (LON) substrate-binding domain LN246_10680 PF13525 Outer membrane lipoprotein LN246_10725 PF00271 Helicase conserved C-terminal domain LN246_10725 PF04851 Type III restriction enzyme, res subunit LN246_10735 PF04055 Radical SAM superfamily LN246_10740 PF01029 NusB family LN246_10745 PF00885 6,7-dimethyl-8-ribityllumazine synthase LN246_10750 PF00793 DAHP synthetase I family LN246_10760 PF03976 Polyphosphate kinase 2 (PPK2) LN246_10785 PF02472 Biopolymer transport protein ExbD/TolR LN246_10795 PF00924 Mechanosensitive ion channel LN246_10800 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LN246_10800 PF01926 50S ribosome-binding GTPase LN246_10805 PF00579 tRNA synthetases class I (W and Y) LN246_10825 PF01177 Asp/Glu/Hydantoin racemase LN246_10830 PF07497 Rho termination factor, RNA-binding domain LN246_10830 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LN246_10830 PF07498 Rho termination factor, N-terminal domain LN246_10840 PF00403 Heavy-metal-associated domain LN246_10845 PF03597 Cytochrome oxidase maturation protein cbb3-type LN246_10855 PF16363 GDP-mannose 4,6 dehydratase LN246_10860 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LN246_10860 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LN246_10860 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LN246_10860 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LN246_10865 PF00342 Phosphoglucose isomerase LN246_10870 PF00483 Nucleotidyl transferase LN246_10875 PF02348 Cytidylyltransferase LN246_10885 PF01761 3-dehydroquinate synthase LN246_10900 PF13439 Glycosyltransferase Family 4 LN246_10900 PF00534 Glycosyl transferases group 1 LN246_10905 PF13439 Glycosyltransferase Family 4 LN246_10905 PF00534 Glycosyl transferases group 1 LN246_10910 PF13439 Glycosyltransferase Family 4 LN246_10910 PF00534 Glycosyl transferases group 1 LN246_10925 PF00117 Glutamine amidotransferase class-I LN246_10930 PF00977 Histidine biosynthesis protein LN246_10940 PF00004 ATPase family associated with various cellular activities (AAA) LN246_10940 PF17862 AAA+ lid domain LN246_10940 PF06480 FtsH Extracellular LN246_10940 PF01434 Peptidase family M41 LN246_10945 PF00682 HMGL-like LN246_10945 PF08502 LeuA allosteric (dimerisation) domain LN246_10950 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LN246_10950 PF02403 Seryl-tRNA synthetase N-terminal domain LN246_10985 PF14659 Phage integrase, N-terminal SAM-like domain LN246_10985 PF00589 Phage integrase family LN246_11000 PF00166 Chaperonin 10 Kd subunit LN246_11005 PF00118 TCP-1/cpn60 chaperonin family LN246_11010 PF03707 Bacterial signalling protein N terminal repeat LN246_11010 PF00990 Diguanylate cyclase, GGDEF domain LN246_11010 PF00563 EAL domain LN246_11015 PF13742 OB-fold nucleic acid binding domain LN246_11015 PF02601 Exonuclease VII, large subunit LN246_11020 PF01209 ubiE/COQ5 methyltransferase family LN246_11025 PF01872 RibD C-terminal domain LN246_11025 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LN246_11030 PF02576 RimP N-terminal domain LN246_11030 PF17384 RimP C-terminal SH3 domain LN246_11035 PF02033 Ribosome-binding factor A LN246_11040 PF04760 Translation initiation factor IF-2, N-terminal region LN246_11040 PF11987 Translation-initiation factor 2 LN246_11040 PF00009 Elongation factor Tu GTP binding domain LN246_11050 PF08544 GHMP kinases C terminal LN246_11050 PF00288 GHMP kinases N terminal domain LN246_11060 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LN246_11065 PF01551 Peptidase family M23 LN246_11070 PF01368 DHH family LN246_11070 PF02272 DHHA1 domain LN246_11075 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LN246_11075 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LN246_11080 PF02445 Quinolinate synthetase A protein LN246_11085 PF02660 Glycerol-3-phosphate acyltransferase LN246_11095 PF00486 Transcriptional regulatory protein, C terminal LN246_11095 PF00072 Response regulator receiver domain LN246_11100 PF00037 4Fe-4S binding domain LN246_11110 PF01103 Surface antigen LN246_11110 PF07244 Surface antigen variable number repeat LN246_11115 PF02153 Prephenate dehydrogenase LN246_11115 PF01842 ACT domain LN246_11135 PF13519 von Willebrand factor type A domain LN246_11135 PF07584 Aerotolerance regulator N-terminal LN246_11155 PF17863 AAA lid domain LN246_11155 PF07726 ATPase family associated with various cellular activities (AAA) LN246_11160 PF00529 HlyD membrane-fusion protein of T1SS LN246_11165 PF00664 ABC transporter transmembrane region LN246_11165 PF00005 ABC transporter LN246_11165 PF03412 Peptidase C39 family LN246_11180 PF00691 OmpA family LN246_11180 PF01389 OmpA-like transmembrane domain LN246_11195 PF00691 OmpA family LN246_11195 PF01389 OmpA-like transmembrane domain LN246_11205 PF17757 UvrB interaction domain LN246_11205 PF03461 TRCF domain LN246_11205 PF00270 DEAD/DEAH box helicase LN246_11205 PF02559 CarD-like/TRCF domain LN246_11205 PF00271 Helicase conserved C-terminal domain LN246_11210 PF08245 Mur ligase middle domain LN246_11220 PF00133 tRNA synthetases class I (I, L, M and V) LN246_11220 PF13603 Leucyl-tRNA synthetase, Domain 2 LN246_11220 PF09334 tRNA synthetases class I (M) LN246_11225 PF12169 DNA polymerase III subunits gamma and tau domain III LN246_11225 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding LN246_11225 PF12170 DNA polymerase III tau subunit V interacting with alpha LN246_11230 PF13277 YmdB-like protein LN246_11235 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LN246_11235 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LN246_11240 PF02504 Fatty acid synthesis protein LN246_11245 PF01783 Ribosomal L32p protein family LN246_11255 PF00334 Nucleoside diphosphate kinase LN246_11265 PF02772 S-adenosylmethionine synthetase, central domain LN246_11265 PF02773 S-adenosylmethionine synthetase, C-terminal domain LN246_11265 PF00438 S-adenosylmethionine synthetase, N-terminal domain LN246_11270 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LN246_11270 PF02780 Transketolase, C-terminal domain LN246_11270 PF02779 Transketolase, pyrimidine binding domain LN246_11280 PF00155 Aminotransferase class I and II LN246_11285 PF00800 Prephenate dehydratase LN246_11285 PF01817 Chorismate mutase type II LN246_11285 PF01842 ACT domain LN246_11290 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LN246_11290 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LN246_11300 PF01195 Peptidyl-tRNA hydrolase LN246_11305 PF01386 Ribosomal L25p family LN246_11305 PF14693 Ribosomal protein TL5, C-terminal domain LN246_11310 PF00437 Type II/IV secretion system protein LN246_11315 PF00923 Transaldolase/Fructose-6-phosphate aldolase LN246_11320 PF03588 Leucyl/phenylalanyl-tRNA protein transferase LN246_11325 PF17871 AAA lid domain LN246_11325 PF02861 Clp amino terminal domain, pathogenicity island component LN246_11325 PF07724 AAA domain (Cdc48 subfamily) LN246_11325 PF00004 ATPase family associated with various cellular activities (AAA) LN246_11325 PF10431 C-terminal, D2-small domain, of ClpB protein LN246_11330 PF02617 ATP-dependent Clp protease adaptor protein ClpS LN246_11340 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LN246_11340 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LN246_11345 PF00425 chorismate binding enzyme LN246_11360 PF01694 Rhomboid family LN246_11375 PF02527 rRNA small subunit methyltransferase G LN246_11385 PF00733 Asparagine synthase LN246_11385 PF13537 Glutamine amidotransferase domain LN246_11405 PF00664 ABC transporter transmembrane region LN246_11405 PF00005 ABC transporter LN246_11410 PF00925 GTP cyclohydrolase II LN246_11415 PF00490 Delta-aminolevulinic acid dehydratase LN246_11420 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LN246_11420 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LN246_11425 PF02754 Cysteine-rich domain LN246_11435 PF00486 Transcriptional regulatory protein, C terminal LN246_11435 PF00072 Response regulator receiver domain LN246_11440 PF01594 AI-2E family transporter LN246_11445 PF17864 RuvB AAA lid domain LN246_11445 PF05496 Holliday junction DNA helicase RuvB P-loop domain LN246_11445 PF05491 RuvB C-terminal winged helix domain LN246_11450 PF02548 Ketopantoate hydroxymethyltransferase LN246_11455 PF00290 Tryptophan synthase alpha chain LN246_11460 PF01790 Prolipoprotein diacylglyceryl transferase LN246_11465 PF01869 BadF/BadG/BcrA/BcrD ATPase family LN246_11480 PF13847 Methyltransferase domain LN246_11485 PF00375 Sodium:dicarboxylate symporter family LN246_11490 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LN246_11490 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LN246_11495 PF00005 ABC transporter LN246_11495 PF08402 TOBE domain LN246_11500 PF00528 Binding-protein-dependent transport system inner membrane component LN246_11515 PF00005 ABC transporter LN246_11520 PF00528 Binding-protein-dependent transport system inner membrane component LN246_11600 PF00842 Alanine racemase, C-terminal domain LN246_11600 PF01168 Alanine racemase, N-terminal domain LN246_11610 PF04371 Porphyromonas-type peptidyl-arginine deiminase LN246_11620 PF00795 Carbon-nitrogen hydrolase LN246_11630 PF00293 NUDIX domain LN246_11635 PF04225 Opacity-associated protein A LysM-like domain LN246_11635 PF01551 Peptidase family M23 LN246_11645 PF02913 FAD linked oxidases, C-terminal domain LN246_11645 PF01565 FAD binding domain LN246_11650 PF03631 Virulence factor BrkB LN246_11660 PF03796 DnaB-like helicase C terminal domain LN246_11670 PF04551 GcpE protein LN246_11680 PF00270 DEAD/DEAH box helicase LN246_11680 PF17764 3′ DNA-binding domain (3′BD) LN246_11680 PF18074 Primosomal protein N C-terminal domain LN246_11680 PF00271 Helicase conserved C-terminal domain LN246_11680 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LN246_11685 PF07963 Prokaryotic N-terminal methylation motif LN246_11690 PF07963 Prokaryotic N-terminal methylation motif LN246_11690 PF00114 Pilin (bacterial filament) LN246_11715 PF00271 Helicase conserved C-terminal domain LN246_11715 PF04851 Type III restriction enzyme, res subunit LN246_11715 PF02151 UvrB/uvrC motif LN246_11715 PF17757 UvrB interaction domain LN246_11715 PF12344 Ultra-violet resistance protein B LN246_11720 PF13089 Polyphosphate kinase N-terminal domain LN246_11720 PF17941 Polyphosphate kinase C-terminal domain 1 LN246_11720 PF13090 Polyphosphate kinase C-terminal domain 2 LN246_11720 PF02503 Polyphosphate kinase middle domain LN246_11725 PF00132 Bacterial transferase hexapeptide (six repeats) LN246_11735 PF14480 DNA polymerase III polC-type N-terminus I LN246_11735 PF11490 DNA polymerase III polC-type N-terminus II LN246_11735 PF07733 Bacterial DNA polymerase III alpha NTPase domain LN246_11735 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LN246_11735 PF14579 Helix-hairpin-helix motif LN246_11735 PF02811 PHP domain LN246_11735 PF00929 Exonuclease LN246_11740 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LN246_11745 PF00834 Ribulose-phosphate 3 epimerase family LN246_11750 PF00830 Ribosomal L28 family LN246_11755 PF02254 TrkA-N domain LN246_11755 PF07885 Ion channel LN246_11760 PF01960 ArgJ family LN246_11770 PF00270 DEAD/DEAH box helicase LN246_11770 PF00271 Helicase conserved C-terminal domain LN246_11770 PF03880 DbpA RNA binding domain LN246_11775 PF09335 SNARE associated Golgi protein LN246_11780 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LN246_11785 PF00109 Beta-ketoacyl synthase, N-terminal domain LN246_11785 PF02801 Beta-ketoacyl synthase, C-terminal domain LN246_11790 PF00550 Phosphopantetheine attachment site LN246_11805 PF00005 ABC transporter LN246_11840 PF00512 His Kinase A (phospho-acceptor) domain LN246_11840 PF08448 PAS fold LN246_11840 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB LN246_11840 PF00672 HAMP domain LN246_11840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LN246_11845 PF00072 Response regulator receiver domain LN246_11845 PF00486 Transcriptional regulatory protein, C terminal LN246_11865 PF06415 BPG-independent PGAM N-terminus (iPGM_N) LN246_11865 PF01676 Metalloenzyme superfamily LN246_11870 PF00953 Glycosyl transferase family 4 LN246_11870 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 LN246_11875 PF08245 Mur ligase middle domain LN246_11885 PF00625 Guanylate kinase LN246_11890 PF02416 mttA/Hcf106 family LN246_11895 PF00750 tRNA synthetases class I (R) LN246_11895 PF05746 DALR anticodon binding domain LN246_11895 PF03485 Arginyl tRNA synthetase N terminal domain LN246_11910 PF01467 Cytidylyltransferase-like LN246_11915 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LN246_11915 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LN246_11920 PF00162 Phosphoglycerate kinase LN246_11925 PF00121 Triosephosphate isomerase LN246_11940 PF08529 NusA N-terminal domain LN246_11940 PF13184 NusA-like KH domain LN246_11950 PF04055 Radical SAM superfamily LN246_11950 PF01938 TRAM domain LN246_11950 PF00919 Uncharacterized protein family UPF0004 LN246_11955 PF04028 Domain of unknown function (DUF374) LN246_11960 PF02899 Phage integrase, N-terminal SAM-like domain LN246_11960 PF00589 Phage integrase family LN246_11965 PF01171 PP-loop family LN246_11970 PF04055 Radical SAM superfamily LN246_11970 PF18693 TRAM domain LN246_11970 PF00919 Uncharacterized protein family UPF0004 LN246_11995 PF01040 UbiA prenyltransferase family LN246_12000 PF01066 CDP-alcohol phosphatidyltransferase LN246_12010 PF00361 Proton-conducting membrane transporter LN246_12015 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus LN246_12015 PF00361 Proton-conducting membrane transporter LN246_12020 PF00361 Proton-conducting membrane transporter LN246_12020 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LN246_12025 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LN246_12030 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LN246_12035 PF12838 4Fe-4S dicluster domain LN246_12040 PF00146 NADH dehydrogenase LN246_12045 PF12838 4Fe-4S dicluster domain LN246_12045 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LN246_12045 PF00384 Molybdopterin oxidoreductase LN246_12045 PF01568 Molydopterin dinucleotide binding domain LN246_12045 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LN246_12050 PF13237 4Fe-4S dicluster domain LN246_12050 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LN246_12050 PF00384 Molybdopterin oxidoreductase LN246_12050 PF01568 Molydopterin dinucleotide binding domain LN246_12050 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LN246_12055 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LN246_12055 PF07992 Pyridine nucleotide-disulphide oxidoreductase LN246_12055 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LN246_12065 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LN246_12070 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LN246_12075 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LN246_12080 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LN246_12090 PF00004 ATPase family associated with various cellular activities (AAA) LN246_12090 PF16450 Proteasomal ATPase OB C-terminal domain LN246_12090 PF17758 Proteasomal ATPase OB N-terminal domain LN246_12095 PF05524 PEP-utilising enzyme, N-terminal LN246_12095 PF00391 PEP-utilising enzyme, mobile domain LN246_12095 PF02896 PEP-utilising enzyme, TIM barrel domain LN246_12095 PF00381 PTS HPr component phosphorylation site LN246_12095 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LN246_12100 PF02378 Phosphotransferase system, EIIC LN246_12100 PF00367 phosphotransferase system, EIIB LN246_12100 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LN246_12105 PF04333 MlaA lipoprotein LN246_12125 PF00691 OmpA family LN246_12125 PF01389 OmpA-like transmembrane domain LN246_12130 PF07992 Pyridine nucleotide-disulphide oxidoreductase LN246_12140 PF01641 SelR domain LN246_12150 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LN246_12155 PF01979 Amidohydrolase family LN246_12160 PF13193 AMP-binding enzyme C-terminal domain LN246_12160 PF00501 AMP-binding enzyme LN246_12170 PF01261 Xylose isomerase-like TIM barrel LN246_12195 PF13662 Toprim domain LN246_12195 PF08275 DNA primase catalytic core, N-terminal domain LN246_12195 PF16730 DnaG-primase C-terminal, helicase-binding domain LN246_12195 PF01807 CHC2 zinc finger LN246_12205 PF00075 RNase H LN246_12210 PF00035 Double-stranded RNA binding motif LN246_12210 PF14622 Ribonuclease-III-like LN246_12215 PF01264 Chorismate synthase LN246_12225 PF01351 Ribonuclease HII LN246_12230 PF16124 RecQ zinc-binding LN246_12230 PF00270 DEAD/DEAH box helicase LN246_12230 PF00271 Helicase conserved C-terminal domain LN246_12230 PF00570 HRDC domain LN246_12230 PF09382 RQC domain LN246_12270 PF00072 Response regulator receiver domain LN246_12270 PF00486 Transcriptional regulatory protein, C terminal LN246_12280 PF00005 ABC transporter LN246_12285 PF00528 Binding-protein-dependent transport system inner membrane component LN246_12290 PF00528 Binding-protein-dependent transport system inner membrane component LN246_12295 PF12849 PBP superfamily domain LN246_12300 PF00486 Transcriptional regulatory protein, C terminal LN246_12300 PF00072 Response regulator receiver domain LN246_12305 PF01384 Phosphate transporter family LN246_12330 PF02472 Biopolymer transport protein ExbD/TolR LN246_12335 PF01618 MotA/TolQ/ExbB proton channel family LN246_12340 PF01618 MotA/TolQ/ExbB proton channel family LN246_12365 PF02575 YbaB/EbfC DNA-binding family LN246_12370 PF02261 Aspartate decarboxylase LN246_12385 PF02875 Mur ligase family, glutamate ligase domain LN246_12385 PF08245 Mur ligase middle domain LN246_12395 PF01106 NifU-like domain LN246_12400 PF01196 Ribosomal protein L17 LN246_12405 PF01000 RNA polymerase Rpb3/RpoA insert domain LN246_12405 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LN246_12405 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LN246_12410 PF00163 Ribosomal protein S4/S9 N-terminal domain LN246_12410 PF01479 S4 domain LN246_12415 PF00411 Ribosomal protein S11 LN246_12420 PF00416 Ribosomal protein S13/S18 LN246_12425 PF00444 Ribosomal protein L36 LN246_12430 PF00990 Diguanylate cyclase, GGDEF domain LN246_12435 PF01176 Translation initiation factor 1A / IF-1 LN246_12440 PF00557 Metallopeptidase family M24 LN246_12445 PF00344 SecY translocase LN246_12450 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LN246_12455 PF00333 Ribosomal protein S5, N-terminal domain LN246_12455 PF03719 Ribosomal protein S5, C-terminal domain LN246_12460 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LN246_12465 PF00347 Ribosomal protein L6 LN246_12470 PF00410 Ribosomal protein S8 LN246_12475 PF00253 Ribosomal protein S14p/S29e LN246_12480 PF00281 Ribosomal protein L5 LN246_12480 PF00673 ribosomal L5P family C-terminus LN246_12485 PF00467 KOW motif LN246_12485 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LN246_12490 PF00238 Ribosomal protein L14p/L23e LN246_12495 PF00366 Ribosomal protein S17 LN246_12500 PF00831 Ribosomal L29 protein LN246_12505 PF00252 Ribosomal protein L16p/L10e LN246_12510 PF07650 KH domain LN246_12510 PF00189 Ribosomal protein S3, C-terminal domain LN246_12515 PF00237 Ribosomal protein L22p/L17e LN246_12520 PF00203 Ribosomal protein S19 LN246_12525 PF00181 Ribosomal Proteins L2, RNA binding domain LN246_12525 PF03947 Ribosomal Proteins L2, C-terminal domain LN246_12530 PF00276 Ribosomal protein L23 LN246_12535 PF00573 Ribosomal protein L4/L1 family LN246_12540 PF00297 Ribosomal protein L3 LN246_12545 PF00338 Ribosomal protein S10p/S20e LN246_12595 PF00484 Carbonic anhydrase LN246_12600 PF01740 STAS domain LN246_12600 PF00916 Sulfate permease family LN246_12630 PF00149 Calcineurin-like phosphoesterase LN246_12640 PF00873 AcrB/AcrD/AcrF family LN246_12650 PF01863 Protein of unknown function DUF45 LN246_12660 PF01625 Peptide methionine sulfoxide reductase LN246_12675 PF17961 Bacterial Ig domain LN246_12675 PF17210 SdrD B-like domain LN246_12675 PF04650 YSIRK type signal peptide LN246_12710 PF00920 Dehydratase family LN246_12715 PF01476 LysM domain LN246_12715 PF00877 NlpC/P60 family LN246_12720 PF00732 GMC oxidoreductase LN246_12720 PF05199 GMC oxidoreductase LN246_12735 PF07681 DoxX LN246_12750 PF00453 Ribosomal protein L20 LN246_12755 PF01632 Ribosomal protein L35 LN246_12765 PF01624 MutS domain I LN246_12765 PF05192 MutS domain III LN246_12765 PF05190 MutS family domain IV LN246_12765 PF00488 MutS domain V LN246_12770 PF05198 Translation initiation factor IF-3, N-terminal domain LN246_12770 PF00707 Translation initiation factor IF-3, C-terminal domain LN246_12775 PF03129 Anticodon binding domain LN246_12775 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LN246_12775 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LN246_12780 PF00990 Diguanylate cyclase, GGDEF domain LN246_12780 PF03707 Bacterial signalling protein N terminal repeat LN246_12780 PF00563 EAL domain LN246_12800 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system LN246_12830 PF03808 Glycosyl transferase WecB/TagA/CpsF family LN246_12840 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LN246_12840 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LN246_12850 PF13439 Glycosyltransferase Family 4 LN246_12855 PF14602 Hexapeptide repeat of succinyl-transferase LN246_12855 PF00132 Bacterial transferase hexapeptide (six repeats) LN246_12855 PF12804 MobA-like NTP transferase domain LN246_12860 PF01757 Acyltransferase family LN246_12875 PF00535 Glycosyl transferase family 2 LN246_12895 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LN246_12895 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LN246_12895 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LN246_12900 PF02350 UDP-N-acetylglucosamine 2-epimerase LN246_12905 PF00483 Nucleotidyl transferase LN246_12920 PF01678 Diaminopimelate epimerase LN246_12925 PF01121 Dephospho-CoA kinase LN246_12950 PF00268 Ribonucleotide reductase, small chain LN246_12960 PF00285 Citrate synthase, C-terminal domain LN246_12965 PF03477 ATP cone domain LN246_12965 PF02867 Ribonucleotide reductase, barrel domain LN246_12965 PF00317 Ribonucleotide reductase, all-alpha domain LN246_12970 PF10397 Adenylosuccinate lyase C-terminus LN246_12970 PF00206 Lyase LN246_12975 PF00849 RNA pseudouridylate synthase LN246_12980 PF04055 Radical SAM superfamily LN246_12990 PF00977 Histidine biosynthesis protein LN246_12995 PF00398 Ribosomal RNA adenine dimethylase LN246_13000 PF17770 Ribonuclease J C-terminal domain LN246_13000 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LN246_13000 PF00753 Metallo-beta-lactamase superfamily LN246_13005 PF00571 CBS domain LN246_13005 PF01380 SIS domain LN246_13010 PF00849 RNA pseudouridylate synthase LN246_13010 PF01479 S4 domain LN246_13015 PF05496 Holliday junction DNA helicase RuvB P-loop domain LN246_13015 PF12002 MgsA AAA+ ATPase C terminal LN246_13015 PF16193 AAA C-terminal domain LN246_13025 PF05736 OprF membrane domain LN246_13025 PF00691 OmpA family LN246_13060 PF01235 Sodium:alanine symporter family LN246_13065 PF00586 AIR synthase related protein, N-terminal domain LN246_13065 PF02769 AIR synthase related protein, C-terminal domain LN246_13075 PF01910 Thiamine-binding protein LN246_13090 PF00679 Elongation factor G C-terminus LN246_13090 PF00009 Elongation factor Tu GTP binding domain LN246_13090 PF03144 Elongation factor Tu domain 2 LN246_13095 PF13286 Phosphohydrolase-associated domain LN246_13095 PF01966 HD domain LN246_13110 PF02075 Crossover junction endodeoxyribonuclease RuvC LN246_13115 PF01883 Iron-sulfur cluster assembly protein LN246_13115 PF10609 NUBPL iron-transfer P-loop NTPase LN246_13165 PF01966 HD domain LN246_13165 PF08335 GlnD PII-uridylyltransferase LN246_13170 PF04055 Radical SAM superfamily LN246_13180 PF00117 Glutamine amidotransferase class-I LN246_13195 PF00549 CoA-ligase LN246_13195 PF02629 CoA binding domain LN246_13300 PF14698 Argininosuccinate lyase C-terminal LN246_13300 PF00206 Lyase LN246_13330 PF10417 C-terminal domain of 1-Cys peroxiredoxin LN246_13330 PF00578 AhpC/TSA family LN246_13350 PF03448 MgtE intracellular N domain LN246_13350 PF00571 CBS domain LN246_13350 PF01769 Divalent cation transporter LN246_13355 PF05690 Thiazole biosynthesis protein ThiG LN246_13375 PF13667 ThiC-associated domain LN246_13375 PF01964 Radical SAM ThiC family LN246_13410 PF07715 TonB-dependent Receptor Plug Domain LN246_13410 PF00593 TonB dependent receptor LN246_13415 PF01230 HIT domain LN246_13420 PF01409 tRNA synthetases class II core domain (F) LN246_13420 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LN246_13425 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LN246_13425 PF03484 tRNA synthetase B5 domain LN246_13425 PF01588 Putative tRNA binding domain LN246_13425 PF03147 Ferredoxin-fold anticodon binding domain LN246_13430 PF02401 LytB protein LN246_13435 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LN246_13440 PF00575 S1 RNA binding domain LN246_13445 PF01842 ACT domain LN246_13445 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LN246_13445 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LN246_13455 PF13533 Biotin-lipoyl like LN246_13465 PF01132 Elongation factor P (EF-P) OB domain LN246_13465 PF08207 Elongation factor P (EF-P) KOW-like domain LN246_13465 PF09285 Elongation factor P, C-terminal LN246_13470 PF01965 DJ-1/PfpI family LN246_13495 PF03971 Monomeric isocitrate dehydrogenase LN246_13505 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LN246_13505 PF00056 lactate/malate dehydrogenase, NAD binding domain LN246_13510 PF05681 Fumarate hydratase (Fumerase) LN246_13510 PF05683 Fumarase C-terminus LN246_13520 PF10415 Fumarase C C-terminus LN246_13520 PF00206 Lyase LN246_13525 PF08442 ATP-grasp domain LN246_13525 PF00549 CoA-ligase LN246_13530 PF02629 CoA binding domain LN246_13530 PF00549 CoA-ligase LN246_13545 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase LN246_13545 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg LN246_13545 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II LN246_13635 PF13361 UvrD-like helicase C-terminal domain LN246_13635 PF00580 UvrD/REP helicase N-terminal domain LN246_13635 PF12705 PD-(D/E)XK nuclease superfamily LN246_13640 PF00196 Bacterial regulatory proteins, luxR family LN246_13640 PF00072 Response regulator receiver domain LN246_13645 PF00572 Ribosomal protein L13 LN246_13650 PF00380 Ribosomal protein S9/S16 LN246_13670 PF01327 Polypeptide deformylase LN246_13690 PF13419 Haloacid dehalogenase-like hydrolase LN246_13695 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase LN246_13705 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg LN246_13705 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II LN246_13710 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LN246_13720 PF08360 QacR-like protein, C-terminal region LN246_13720 PF00440 Bacterial regulatory proteins, tetR family LN246_13755 PF00677 Lumazine binding domain LN246_13760 PF01134 Glucose inhibited division protein A LN246_13760 PF13932 GidA associated domain LN246_13800 PF05973 Phage derived protein Gp49-like (DUF891) LN246_13815 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal LN246_13815 PF00355 Rieske [2Fe-2S] domain LN246_13820 PF00033 Cytochrome b/b6/petB LN246_13820 PF00032 Cytochrome b(C-terminal)/b6/petD LN246_13825 PF02167 Cytochrome C1 family LN246_13830 PF06463 Molybdenum Cofactor Synthesis C LN246_13830 PF04055 Radical SAM superfamily LN246_13865 PF00994 Probable molybdopterin binding domain LN246_13865 PF03454 MoeA C-terminal region (domain IV) LN246_13865 PF03453 MoeA N-terminal region (domain I and II) LN246_13875 PF04452 RNA methyltransferase LN246_13895 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LN246_13900 PF00588 SpoU rRNA Methylase family LN246_13900 PF08032 RNA 2'-O ribose methyltransferase substrate binding LN246_13920 PF04461 Protein of unknown function (DUF520) LN246_13940 PF02021 Uncharacterised protein family UPF0102 LN246_13945 PF05721 Phytanoyl-CoA dioxygenase (PhyH) LN246_13960 PF01113 Dihydrodipicolinate reductase, N-terminus LN246_13960 PF05173 Dihydrodipicolinate reductase, C-terminus LN246_13970 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LN246_13970 PF01502 Phosphoribosyl-AMP cyclohydrolase LN246_13985 PF01063 Amino-transferase class IV LN246_13990 PF00171 Aldehyde dehydrogenase family LN246_14005 PF13180 PDZ domain LN246_14005 PF17820 PDZ domain LN246_14015 PF00578 AhpC/TSA family LN246_14030 PF00889 Elongation factor TS LN246_14035 PF00484 Carbonic anhydrase LN246_14040 PF00289 Biotin carboxylase, N-terminal domain LN246_14040 PF02785 Biotin carboxylase C-terminal domain LN246_14040 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LN246_14050 PF00005 ABC transporter LN246_14055 PF03462 PCRF domain LN246_14055 PF00472 RF-1 domain LN246_14070 PF01098 Cell cycle protein LN246_14075 PF04101 Glycosyltransferase family 28 C-terminal domain LN246_14075 PF03033 Glycosyltransferase family 28 N-terminal domain LN246_14085 PF02272 DHHA1 domain LN246_14085 PF01411 tRNA synthetases class II (A) LN246_14085 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LN246_14095 PF02545 Maf-like protein LN246_14100 PF00155 Aminotransferase class I and II LN246_14105 PF17092 Penicillin-binding protein OB-like domain LN246_14105 PF00905 Penicillin binding protein transpeptidase domain LN246_14105 PF00912 Transglycosylase LN246_14120 PF00120 Glutamine synthetase, catalytic domain LN246_14120 PF03951 Glutamine synthetase, beta-Grasp domain LN246_14140 PF02091 Glycyl-tRNA synthetase alpha subunit LN246_14145 PF01784 NIF3 (NGG1p interacting factor 3) LN246_14155 PF00534 Glycosyl transferases group 1 LN246_14155 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) LN246_14160 PF02594 Uncharacterised ACR, YggU family COG1872 LN246_14165 PF00849 RNA pseudouridylate synthase LN246_14175 PF00886 Ribosomal protein S16 LN246_14185 PF01782 RimM N-terminal domain LN246_14190 PF01746 tRNA (Guanine-1)-methyltransferase LN246_14195 PF01245 Ribosomal protein L19 LN246_14220 PF00873 AcrB/AcrD/AcrF family LN246_14235 PF01668 SmpB protein LN246_14245 PF00849 RNA pseudouridylate synthase LN246_14260 PF00288 GHMP kinases N terminal domain LN246_14265 PF00288 GHMP kinases N terminal domain LN246_14270 PF01509 TruB family pseudouridylate synthase (N terminal domain) LN246_14290 PF01063 Amino-transferase class IV LN246_14300 PF00484 Carbonic anhydrase LN246_14310 PF01809 Putative membrane protein insertion efficiency factor LN246_14325 PF02699 Preprotein translocase subunit LN246_14330 PF02355 Protein export membrane protein LN246_14335 PF07549 SecD/SecF GG Motif LN246_14335 PF02355 Protein export membrane protein LN246_14345 PF03781 Sulfatase-modifying factor enzyme 1 LN246_14345 PF12867 DinB superfamily LN246_14350 PF00155 Aminotransferase class I and II LN246_14355 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family LN246_14360 PF00155 Aminotransferase class I and II LN246_14375 PF00488 MutS domain V LN246_14375 PF01713 Smr domain LN246_14380 PF00488 MutS domain V LN246_14380 PF01713 Smr domain LN246_14400 PF15437 Plasminogen-binding protein pgbA C-terminal LN246_14405 PF02899 Phage integrase, N-terminal SAM-like domain LN246_14405 PF00589 Phage integrase family LN246_14415 PF03309 Type III pantothenate kinase LN246_14420 PF01634 ATP phosphoribosyltransferase LN246_14450 PF00082 Subtilase family LN246_14450 PF05922 Peptidase inhibitor I9 LN246_14455 PF00082 Subtilase family LN246_14455 PF01483 Proprotein convertase P-domain LN246_14475 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal LN246_14475 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LN246_14480 PF00374 Nickel-dependent hydrogenase LN246_14495 PF00374 Nickel-dependent hydrogenase LN246_14500 PF01292 Prokaryotic cytochrome b561 LN246_14505 PF01750 Hydrogenase maturation protease LN246_14525 PF00708 Acylphosphatase LN246_14525 PF17788 HypF Kae1-like domain LN246_14525 PF01300 Telomere recombination LN246_14525 PF07503 HypF finger LN246_14530 PF00708 Acylphosphatase LN246_14530 PF07503 HypF finger LN246_14530 PF17788 HypF Kae1-like domain LN246_14530 PF01300 Telomere recombination LN246_14545 PF01695 IstB-like ATP binding protein LN246_14550 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LN246_14550 PF14824 Sirohaem biosynthesis protein central LN246_14550 PF10414 Sirohaem synthase dimerisation region LN246_14570 PF02492 CobW/HypB/UreG, nucleotide-binding domain LN246_14575 PF01455 HupF/HypC family LN246_14580 PF01924 Hydrogenase formation hypA family LN246_14585 PF02769 AIR synthase related protein, C-terminal domain LN246_14585 PF00586 AIR synthase related protein, N-terminal domain LN246_14590 PF00551 Formyl transferase LN246_14590 PF02911 Formyl transferase, C-terminal domain LN246_14590 PF00378 Enoyl-CoA hydratase/isomerase LN246_14600 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA LN246_14615 PF01750 Hydrogenase maturation protease LN246_14620 PF01084 Ribosomal protein S18 LN246_14625 PF00436 Single-strand binding protein family LN246_14630 PF01250 Ribosomal protein S6 LN246_14635 PF06144 DNA polymerase III, delta subunit LN246_14640 PF00773 RNB domain LN246_14645 PF00773 RNB domain LN246_14650 PF01435 Peptidase family M48 LN246_14660 PF07494 Two component regulator propeller LN246_14660 PF00512 His Kinase A (phospho-acceptor) domain LN246_14660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LN246_14660 PF00072 Response regulator receiver domain LN246_14660 PF07495 Y_Y_Y domain LN246_14660 PF12833 Helix-turn-helix domain LN246_14665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LN246_14665 PF18698 Histidine kinase sensor domain LN246_14665 PF00672 HAMP domain LN246_14665 PF00989 PAS fold LN246_14665 PF00512 His Kinase A (phospho-acceptor) domain LN246_14710 PF16123 Hydroxyacylglutathione hydrolase C-terminus LN246_14710 PF00753 Metallo-beta-lactamase superfamily LN246_14750 PF01145 SPFH domain / Band 7 family LN246_14765 PF00849 RNA pseudouridylate synthase LN246_14765 PF01479 S4 domain LN246_14780 PF04748 Divergent polysaccharide deacetylase LN246_14795 PF02481 DNA recombination-mediator protein A LN246_14800 PF00578 AhpC/TSA family LN246_14810 PF00933 Glycosyl hydrolase family 3 N terminal domain LN246_14830 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LN246_14835 PF00005 ABC transporter LN246_14835 PF02687 FtsX-like permease family LN246_14835 PF12704 MacB-like periplasmic core domain LN246_14840 PF12704 MacB-like periplasmic core domain LN246_14840 PF00005 ABC transporter LN246_14840 PF02687 FtsX-like permease family LN246_14845 PF03652 Holliday junction resolvase LN246_14855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LN246_14855 PF00672 HAMP domain LN246_14855 PF00512 His Kinase A (phospho-acceptor) domain LN246_14870 PF00877 NlpC/P60 family LN246_14890 PF02416 mttA/Hcf106 family LN246_14895 PF04055 Radical SAM superfamily LN246_14895 PF06969 HemN C-terminal domain LN246_14900 PF00293 NUDIX domain LN246_14905 PF00696 Amino acid kinase family LN246_14905 PF13840 ACT domain LN246_14905 PF01842 ACT domain LN246_14925 PF00809 Pterin binding enzyme LN246_14945 PF06574 FAD synthetase LN246_14945 PF01687 Riboflavin kinase LN246_14950 PF12146 Serine aminopeptidase, S33 LN246_14955 PF00990 Diguanylate cyclase, GGDEF domain LN246_14955 PF03707 Bacterial signalling protein N terminal repeat LN246_14955 PF00563 EAL domain LN246_14960 PF13649 Methyltransferase domain LN246_14965 PF01474 Class-II DAHP synthetase family LN246_14975 PF00072 Response regulator receiver domain LN246_14975 PF00486 Transcriptional regulatory protein, C terminal LN246_14980 PF00072 Response regulator receiver domain LN246_14980 PF13188 PAS domain LN246_14980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LN246_14980 PF08448 PAS fold LN246_14980 PF00512 His Kinase A (phospho-acceptor) domain LN246_14985 PF12833 Helix-turn-helix domain LN246_14985 PF00072 Response regulator receiver domain LN246_14990 PF08501 Shikimate dehydrogenase substrate binding domain LN246_15000 PF00593 TonB dependent receptor LN246_15000 PF07715 TonB-dependent Receptor Plug Domain LN246_15015 PF12801 4Fe-4S binding domain LN246_15020 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component LN246_15025 PF01869 BadF/BadG/BcrA/BcrD ATPase family LN246_15030 PF00873 AcrB/AcrD/AcrF family LN246_15035 PF00593 TonB dependent receptor LN246_15035 PF07715 TonB-dependent Receptor Plug Domain LN246_15040 PF00425 chorismate binding enzyme LN246_15040 PF04715 Anthranilate synthase component I, N terminal region LN246_15075 PF01475 Ferric uptake regulator family LN246_15085 PF00437 Type II/IV secretion system protein LN246_15090 PF03960 ArsC family LN246_15095 PF02686 Glu-tRNAGln amidotransferase C subunit LN246_15105 PF17773 UPF0176 acylphosphatase like domain LN246_15105 PF00581 Rhodanese-like domain LN246_15115 PF01546 Peptidase family M20/M25/M40 LN246_15115 PF07687 Peptidase dimerisation domain LN246_15130 PF00512 His Kinase A (phospho-acceptor) domain LN246_15130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LN246_15130 PF00672 HAMP domain LN246_15135 PF13247 4Fe-4S dicluster domain LN246_15170 PF01515 Phosphate acetyl/butaryl transferase LN246_15170 PF03949 Malic enzyme, NAD binding domain LN246_15170 PF00390 Malic enzyme, N-terminal domain LN246_15185 PF00486 Transcriptional regulatory protein, C terminal LN246_15185 PF00072 Response regulator receiver domain LN246_15190 PF02542 YgbB family LN246_15190 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase