syc1578_d 63fa4f3f89bf6538a2521d97772cdc0d 315 Gene3D G3DSA:3.40.50.1820 13 308 7.7E-59 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold syc1578_d 63fa4f3f89bf6538a2521d97772cdc0d 315 Pfam PF12697 Alpha/beta hydrolase family 49 296 2.6E-24 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 syc1578_d 63fa4f3f89bf6538a2521d97772cdc0d 315 SUPERFAMILY SSF53474 22 304 4.63E-65 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold syc0664_c c4bf9e049778f033753896be864d69e6 892 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 890 176.62 T 11-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 syc0664_c c4bf9e049778f033753896be864d69e6 892 Gene3D G3DSA:3.30.980.10 569 707 3.6E-45 T 11-10-2018 syc0664_c c4bf9e049778f033753896be864d69e6 892 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 665 708 3.2E-17 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 syc0664_c c4bf9e049778f033753896be864d69e6 892 SUPERFAMILY SSF50447 466 564 7.73E-23 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily syc0664_c c4bf9e049778f033753896be864d69e6 892 PRINTS PR00980 Alanyl-tRNA synthetase signature 90 101 1.4E-29 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 syc0664_c c4bf9e049778f033753896be864d69e6 892 PRINTS PR00980 Alanyl-tRNA synthetase signature 239 252 1.4E-29 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 syc0664_c c4bf9e049778f033753896be864d69e6 892 PRINTS PR00980 Alanyl-tRNA synthetase signature 314 327 1.4E-29 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 syc0664_c c4bf9e049778f033753896be864d69e6 892 PRINTS PR00980 Alanyl-tRNA synthetase signature 212 223 1.4E-29 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 syc0664_c c4bf9e049778f033753896be864d69e6 892 PRINTS PR00980 Alanyl-tRNA synthetase signature 290 306 1.4E-29 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 syc0664_c c4bf9e049778f033753896be864d69e6 892 Gene3D G3DSA:2.40.30.130 474 564 8.0E-12 T 11-10-2018 syc0664_c c4bf9e049778f033753896be864d69e6 892 Gene3D G3DSA:3.10.310.40 776 887 8.4E-26 T 11-10-2018 syc0664_c c4bf9e049778f033753896be864d69e6 892 SUPERFAMILY SSF55681 23 258 2.73E-97 T 11-10-2018 syc0664_c c4bf9e049778f033753896be864d69e6 892 SUPERFAMILY SSF55186 564 723 1.06E-45 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 syc0664_c c4bf9e049778f033753896be864d69e6 892 Gene3D G3DSA:3.30.54.20 636 689 3.6E-45 T 11-10-2018 syc0664_c c4bf9e049778f033753896be864d69e6 892 Pfam PF01411 tRNA synthetases class II (A) 26 566 9.8E-215 T 11-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 syc0664_c c4bf9e049778f033753896be864d69e6 892 SUPERFAMILY SSF101353 259 472 5.1E-57 T 11-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 syc0664_c c4bf9e049778f033753896be864d69e6 892 Pfam PF02272 DHHA1 domain 745 884 5.6E-22 T 11-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 syc0664_c c4bf9e049778f033753896be864d69e6 892 Gene3D G3DSA:3.30.930.10 21 254 3.6E-102 T 11-10-2018 syc0664_c c4bf9e049778f033753896be864d69e6 892 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 26 869 0.0 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 syc0664_c c4bf9e049778f033753896be864d69e6 892 SMART SM00863 665 708 9.8E-22 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 syc1531_d 3c842aaf7b0813cc1acd5aa20d532553 294 Gene3D G3DSA:2.60.260.20 133 194 1.0E-12 T 11-10-2018 syc1531_d 3c842aaf7b0813cc1acd5aa20d532553 294 Pfam PF00226 DnaJ domain 13 74 2.0E-25 T 11-10-2018 IPR001623 DnaJ domain syc1531_d 3c842aaf7b0813cc1acd5aa20d532553 294 SUPERFAMILY SSF49493 200 284 4.45E-20 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 syc1531_d 3c842aaf7b0813cc1acd5aa20d532553 294 Gene3D G3DSA:2.60.260.20 196 294 1.1E-25 T 11-10-2018 syc1531_d 3c842aaf7b0813cc1acd5aa20d532553 294 Gene3D G3DSA:1.10.287.110 10 122 3.8E-29 T 11-10-2018 IPR036869 Chaperone J-domain superfamily syc1531_d 3c842aaf7b0813cc1acd5aa20d532553 294 SUPERFAMILY SSF46565 8 93 2.36E-28 T 11-10-2018 IPR036869 Chaperone J-domain superfamily syc1531_d 3c842aaf7b0813cc1acd5aa20d532553 294 SUPERFAMILY SSF49493 134 195 6.15E-10 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 syc1531_d 3c842aaf7b0813cc1acd5aa20d532553 294 Pfam PF01556 DnaJ C terminal domain 139 273 1.1E-24 T 11-10-2018 IPR002939 Chaperone DnaJ, C-terminal syc1531_d 3c842aaf7b0813cc1acd5aa20d532553 294 ProSitePatterns PS00636 Nt-dnaJ domain signature. 55 74 - T 11-10-2018 IPR018253 DnaJ domain, conserved site syc1531_d 3c842aaf7b0813cc1acd5aa20d532553 294 SMART SM00271 12 70 1.7E-29 T 11-10-2018 IPR001623 DnaJ domain syc1531_d 3c842aaf7b0813cc1acd5aa20d532553 294 PRINTS PR00625 DnaJ domain signature 50 70 4.7E-20 T 11-10-2018 IPR001623 DnaJ domain syc1531_d 3c842aaf7b0813cc1acd5aa20d532553 294 PRINTS PR00625 DnaJ domain signature 70 89 4.7E-20 T 11-10-2018 IPR001623 DnaJ domain syc1531_d 3c842aaf7b0813cc1acd5aa20d532553 294 PRINTS PR00625 DnaJ domain signature 15 33 4.7E-20 T 11-10-2018 IPR001623 DnaJ domain syc1531_d 3c842aaf7b0813cc1acd5aa20d532553 294 PRINTS PR00625 DnaJ domain signature 33 48 4.7E-20 T 11-10-2018 IPR001623 DnaJ domain syc0399_d c7ebb9482a83ba5fb05d0f4f149c0b57 527 Gene3D G3DSA:3.30.1300.10 177 283 7.3E-32 T 11-10-2018 syc0399_d c7ebb9482a83ba5fb05d0f4f149c0b57 527 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 23 66 2.2E-7 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 syc0399_d c7ebb9482a83ba5fb05d0f4f149c0b57 527 Pfam PF02569 Pantoate-beta-alanine ligase 10 277 4.6E-100 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 syc0399_d c7ebb9482a83ba5fb05d0f4f149c0b57 527 SUPERFAMILY SSF52540 284 506 2.78E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0399_d c7ebb9482a83ba5fb05d0f4f149c0b57 527 Gene3D G3DSA:3.40.50.300 284 507 1.2E-83 T 11-10-2018 syc0399_d c7ebb9482a83ba5fb05d0f4f149c0b57 527 Pfam PF02224 Cytidylate kinase 286 504 8.4E-73 T 11-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 syc0399_d c7ebb9482a83ba5fb05d0f4f149c0b57 527 Gene3D G3DSA:3.40.50.620 3 176 6.1E-72 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold syc0399_d c7ebb9482a83ba5fb05d0f4f149c0b57 527 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 8 279 4.6E-105 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 syc0399_d c7ebb9482a83ba5fb05d0f4f149c0b57 527 SUPERFAMILY SSF52374 7 280 1.69E-98 T 11-10-2018 syc0399_d c7ebb9482a83ba5fb05d0f4f149c0b57 527 Hamap MF_00158 Pantothenate synthetase [panC]. 2 279 38.904 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 syc0399_d c7ebb9482a83ba5fb05d0f4f149c0b57 527 Hamap MF_00238 Cytidylate kinase [cmk]. 284 507 32.739 T 11-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 syc0399_d c7ebb9482a83ba5fb05d0f4f149c0b57 527 TIGRFAM TIGR00017 cmk: cytidylate kinase 283 501 2.0E-76 T 11-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 syc0399_d c7ebb9482a83ba5fb05d0f4f149c0b57 527 Hamap MF_01349 Bifunctional pantoate ligase/cytidylate kinase [panC/cmk]. 24 510 51.452 T 11-10-2018 IPR024894 Bifunctional pantoate ligase/cytidylate kinase GO:0004127|GO:0004592|GO:0005524|GO:0006139|GO:0015940 KEGG: 00240+2.7.4.25|KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|MetaCyc: PWY-7205 syc1716_d 0f6029f552659c75db68d42c786ad597 287 Pfam PF00226 DnaJ domain 238 283 6.6E-8 T 11-10-2018 IPR001623 DnaJ domain syc1716_d 0f6029f552659c75db68d42c786ad597 287 SUPERFAMILY SSF46565 238 283 4.06E-13 T 11-10-2018 IPR036869 Chaperone J-domain superfamily syc1716_d 0f6029f552659c75db68d42c786ad597 287 Gene3D G3DSA:1.10.287.110 226 285 6.5E-12 T 11-10-2018 IPR036869 Chaperone J-domain superfamily syc1716_d 0f6029f552659c75db68d42c786ad597 287 SMART SM00271 233 287 1.6E-8 T 11-10-2018 IPR001623 DnaJ domain syc1642_d e2b4b0f4c86dcd89d14f4cc77a8f15bf 426 Gene3D G3DSA:3.30.420.40 225 423 6.8E-29 T 11-10-2018 syc1642_d e2b4b0f4c86dcd89d14f4cc77a8f15bf 426 SUPERFAMILY SSF53067 5 226 1.77E-22 T 11-10-2018 syc1642_d e2b4b0f4c86dcd89d14f4cc77a8f15bf 426 Gene3D G3DSA:3.30.420.40 2 224 4.5E-23 T 11-10-2018 syc1642_d e2b4b0f4c86dcd89d14f4cc77a8f15bf 426 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 249 413 5.5E-14 T 11-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 syc1642_d e2b4b0f4c86dcd89d14f4cc77a8f15bf 426 SUPERFAMILY SSF53067 233 420 2.71E-20 T 11-10-2018 syc1448_d e805c4cf512a97868308f43c103854f8 639 Gene3D G3DSA:1.25.40.10 2 112 6.7E-16 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc1448_d e805c4cf512a97868308f43c103854f8 639 Gene3D G3DSA:3.40.50.2000 427 609 6.0E-104 T 11-10-2018 syc1448_d e805c4cf512a97868308f43c103854f8 639 Pfam PF13181 Tetratricopeptide repeat 49 81 2.3E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc1448_d e805c4cf512a97868308f43c103854f8 639 Pfam PF13181 Tetratricopeptide repeat 15 48 0.17 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc1448_d e805c4cf512a97868308f43c103854f8 639 Pfam PF13844 Glycosyl transferase family 41 440 625 2.6E-21 T 11-10-2018 IPR029489 O-GlcNAc transferase, C-terminal KEGG: 00514+2.4.1.255|MetaCyc: PWY-7437|Reactome: R-HSA-3214847|Reactome: R-HSA-5689603 syc1448_d e805c4cf512a97868308f43c103854f8 639 Pfam PF13844 Glycosyl transferase family 41 276 418 4.8E-20 T 11-10-2018 IPR029489 O-GlcNAc transferase, C-terminal KEGG: 00514+2.4.1.255|MetaCyc: PWY-7437|Reactome: R-HSA-3214847|Reactome: R-HSA-5689603 syc1448_d e805c4cf512a97868308f43c103854f8 639 Gene3D G3DSA:3.40.50.11380 269 614 6.0E-104 T 11-10-2018 syc1448_d e805c4cf512a97868308f43c103854f8 639 SMART SM00028 185 218 320.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc1448_d e805c4cf512a97868308f43c103854f8 639 SMART SM00028 117 150 120.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc1448_d e805c4cf512a97868308f43c103854f8 639 SMART SM00028 49 82 0.0034 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc1448_d e805c4cf512a97868308f43c103854f8 639 SMART SM00028 15 48 1.5 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc1448_d e805c4cf512a97868308f43c103854f8 639 Gene3D G3DSA:1.25.40.10 113 227 1.2E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc1448_d e805c4cf512a97868308f43c103854f8 639 SUPERFAMILY SSF48452 14 213 2.66E-20 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc1907_c afeeb7973950c21a533f3f4d5b3900bc 140 SUPERFAMILY SSF51316 6 130 8.72E-61 T 11-10-2018 IPR011057 Mss4-like superfamily syc1907_c afeeb7973950c21a533f3f4d5b3900bc 140 Gene3D G3DSA:2.170.150.20 1 132 2.2E-63 T 11-10-2018 syc1907_c afeeb7973950c21a533f3f4d5b3900bc 140 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 7 128 3.1E-60 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 syc1907_c afeeb7973950c21a533f3f4d5b3900bc 140 Pfam PF01641 SelR domain 11 128 3.7E-55 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 syc1907_c afeeb7973950c21a533f3f4d5b3900bc 140 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 8 131 36.938 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 syc0855_c 511ed05687d68078724f098ed10f2e48 342 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 16 312 56.491 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 syc0855_c 511ed05687d68078724f098ed10f2e48 342 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 174 198 - T 11-10-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 syc0855_c 511ed05687d68078724f098ed10f2e48 342 Pfam PF01218 Coproporphyrinogen III oxidase 21 337 6.6E-136 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 syc0855_c 511ed05687d68078724f098ed10f2e48 342 Gene3D G3DSA:3.40.1500.10 12 337 4.4E-136 T 11-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 syc0855_c 511ed05687d68078724f098ed10f2e48 342 PIRSF PIRSF000166 1 338 8.6E-135 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 syc0855_c 511ed05687d68078724f098ed10f2e48 342 SUPERFAMILY SSF102886 13 337 1.96E-137 T 11-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 syc0855_c 511ed05687d68078724f098ed10f2e48 342 PRINTS PR00073 Coprogen oxidase signature 269 296 2.2E-88 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 syc0855_c 511ed05687d68078724f098ed10f2e48 342 PRINTS PR00073 Coprogen oxidase signature 170 199 2.2E-88 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 syc0855_c 511ed05687d68078724f098ed10f2e48 342 PRINTS PR00073 Coprogen oxidase signature 133 155 2.2E-88 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 syc0855_c 511ed05687d68078724f098ed10f2e48 342 PRINTS PR00073 Coprogen oxidase signature 44 60 2.2E-88 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 syc0855_c 511ed05687d68078724f098ed10f2e48 342 PRINTS PR00073 Coprogen oxidase signature 297 323 2.2E-88 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 syc0855_c 511ed05687d68078724f098ed10f2e48 342 PRINTS PR00073 Coprogen oxidase signature 103 127 2.2E-88 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 syc0855_c 511ed05687d68078724f098ed10f2e48 342 PRINTS PR00073 Coprogen oxidase signature 61 82 2.2E-88 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 syc0330_c 535d413c357a92f3a3f2979bf5edd07f 88 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 84 29.171 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc0330_c 535d413c357a92f3a3f2979bf5edd07f 88 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 69 6.0E-17 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc0330_c 535d413c357a92f3a3f2979bf5edd07f 88 SUPERFAMILY SSF110324 2 83 9.42E-34 T 11-10-2018 syc0330_c 535d413c357a92f3a3f2979bf5edd07f 88 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 80 1.7E-39 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc0330_c 535d413c357a92f3a3f2979bf5edd07f 88 Gene3D G3DSA:2.40.50.100 21 88 5.0E-29 T 11-10-2018 syc0330_c 535d413c357a92f3a3f2979bf5edd07f 88 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 11-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc0330_c 535d413c357a92f3a3f2979bf5edd07f 88 PRINTS PR00063 Ribosomal protein L27 signature 29 53 2.3E-38 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc0330_c 535d413c357a92f3a3f2979bf5edd07f 88 PRINTS PR00063 Ribosomal protein L27 signature 4 28 2.3E-38 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc0330_c 535d413c357a92f3a3f2979bf5edd07f 88 PRINTS PR00063 Ribosomal protein L27 signature 54 78 2.3E-38 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc0330_c 535d413c357a92f3a3f2979bf5edd07f 88 Pfam PF01016 Ribosomal L27 protein 2 81 2.2E-36 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc1139_d ba35b0ce9944a09b102f69444a94a1fd 471 SUPERFAMILY SSF63411 23 245 3.12E-38 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 syc1139_d ba35b0ce9944a09b102f69444a94a1fd 471 SUPERFAMILY SSF63411 263 455 9.09E-43 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 syc1139_d ba35b0ce9944a09b102f69444a94a1fd 471 Pfam PF05193 Peptidase M16 inactive domain 198 377 4.3E-26 T 11-10-2018 IPR007863 Peptidase M16, C-terminal syc1139_d ba35b0ce9944a09b102f69444a94a1fd 471 Pfam PF00675 Insulinase (Peptidase family M16) 48 180 4.6E-8 T 11-10-2018 IPR011765 Peptidase M16, N-terminal syc1139_d ba35b0ce9944a09b102f69444a94a1fd 471 Gene3D G3DSA:3.30.830.10 257 447 5.9E-47 T 11-10-2018 syc1139_d ba35b0ce9944a09b102f69444a94a1fd 471 Gene3D G3DSA:3.30.830.10 36 243 1.2E-37 T 11-10-2018 syc1272_c 6a4b6b461982b3c79a464ff1cdb5906a 455 Gene3D G3DSA:3.40.1350.30 133 289 6.3E-103 T 11-10-2018 syc1272_c 6a4b6b461982b3c79a464ff1cdb5906a 455 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 279 452 2.4E-21 T 11-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 syc1272_c 6a4b6b461982b3c79a464ff1cdb5906a 455 Gene3D G3DSA:3.40.50.150 87 448 6.3E-103 T 11-10-2018 syc1272_c 6a4b6b461982b3c79a464ff1cdb5906a 455 Pfam PF01938 TRAM domain 11 64 1.1E-8 T 11-10-2018 IPR002792 TRAM domain syc1272_c 6a4b6b461982b3c79a464ff1cdb5906a 455 SUPERFAMILY SSF50249 8 64 1.83E-13 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold syc1272_c 6a4b6b461982b3c79a464ff1cdb5906a 455 Gene3D G3DSA:2.40.50.140 5 85 5.7E-21 T 11-10-2018 syc1272_c 6a4b6b461982b3c79a464ff1cdb5906a 455 SUPERFAMILY SSF53335 73 452 4.64E-80 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase syc1272_c 6a4b6b461982b3c79a464ff1cdb5906a 455 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 25 446 2.3E-143 T 11-10-2018 syc1272_c 6a4b6b461982b3c79a464ff1cdb5906a 455 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 436 446 - T 11-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site syc1272_c 6a4b6b461982b3c79a464ff1cdb5906a 455 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 383 414 - T 11-10-2018 IPR030390 RNA methyltransferase TrmA, active site syc1855_d 8668edf9f84ff118970176b13fae4c23 414 Pfam PF00171 Aldehyde dehydrogenase family 5 225 2.3E-8 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 syc1855_d 8668edf9f84ff118970176b13fae4c23 414 SUPERFAMILY SSF53720 5 414 3.65E-70 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 syc1855_d 8668edf9f84ff118970176b13fae4c23 414 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 4 414 28.726 T 11-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 syc1855_d 8668edf9f84ff118970176b13fae4c23 414 Gene3D G3DSA:3.40.309.10 226 374 1.3E-114 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 syc1855_d 8668edf9f84ff118970176b13fae4c23 414 PIRSF PIRSF000151 1 414 2.5E-121 T 11-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 syc1855_d 8668edf9f84ff118970176b13fae4c23 414 Gene3D G3DSA:3.40.605.10 17 411 1.3E-114 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 syc1182_c 9a3747d1ece72e543ffa3d54dbf12abd 261 ProSitePatterns PS00449 ATP synthase a subunit signature. 194 203 - T 11-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 syc1182_c 9a3747d1ece72e543ffa3d54dbf12abd 261 Hamap MF_01393 ATP synthase subunit a [atpB]. 31 255 14.85 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 syc1182_c 9a3747d1ece72e543ffa3d54dbf12abd 261 Pfam PF00119 ATP synthase A chain 49 248 2.3E-54 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 syc1182_c 9a3747d1ece72e543ffa3d54dbf12abd 261 SUPERFAMILY SSF81336 98 249 3.53E-35 T 11-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 syc1182_c 9a3747d1ece72e543ffa3d54dbf12abd 261 Gene3D G3DSA:1.20.120.220 98 255 2.2E-41 T 11-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 syc1182_c 9a3747d1ece72e543ffa3d54dbf12abd 261 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 47 251 8.2E-43 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 syc1182_c 9a3747d1ece72e543ffa3d54dbf12abd 261 PRINTS PR00123 ATP synthase A subunit signature 191 213 2.1E-18 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 syc1182_c 9a3747d1ece72e543ffa3d54dbf12abd 261 PRINTS PR00123 ATP synthase A subunit signature 235 250 2.1E-18 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 syc1182_c 9a3747d1ece72e543ffa3d54dbf12abd 261 PRINTS PR00123 ATP synthase A subunit signature 106 122 2.1E-18 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 syc1182_c 9a3747d1ece72e543ffa3d54dbf12abd 261 PRINTS PR00123 ATP synthase A subunit signature 175 190 2.1E-18 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 syc1409_d 3aec250789164bb279e005585f59aba4 249 Gene3D G3DSA:3.40.50.12740 1 143 3.8E-46 T 11-10-2018 syc1409_d 3aec250789164bb279e005585f59aba4 249 Gene3D G3DSA:1.10.10.10 144 234 7.4E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily syc1409_d 3aec250789164bb279e005585f59aba4 249 Pfam PF00072 Response regulator receiver domain 5 116 1.5E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 syc1409_d 3aec250789164bb279e005585f59aba4 249 SMART SM00862 154 230 5.6E-26 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 syc1409_d 3aec250789164bb279e005585f59aba4 249 SUPERFAMILY SSF52172 2 132 8.25E-43 T 11-10-2018 IPR011006 CheY-like superfamily syc1409_d 3aec250789164bb279e005585f59aba4 249 SUPERFAMILY SSF46894 131 231 6.8E-27 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 syc1409_d 3aec250789164bb279e005585f59aba4 249 SMART SM00448 3 116 3.7E-39 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 syc1409_d 3aec250789164bb279e005585f59aba4 249 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 230 7.4E-26 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 syc0299_c 0bbaf1d49c0785f64c3103949ba40bfb 349 SUPERFAMILY SSF53067 101 316 1.94E-44 T 11-10-2018 syc0299_c 0bbaf1d49c0785f64c3103949ba40bfb 349 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 4.2E-48 T 11-10-2018 IPR017861 Kae1/TsaD family syc0299_c 0bbaf1d49c0785f64c3103949ba40bfb 349 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 270 279 4.2E-48 T 11-10-2018 IPR017861 Kae1/TsaD family syc0299_c 0bbaf1d49c0785f64c3103949ba40bfb 349 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 4.2E-48 T 11-10-2018 IPR017861 Kae1/TsaD family syc0299_c 0bbaf1d49c0785f64c3103949ba40bfb 349 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 4.2E-48 T 11-10-2018 IPR017861 Kae1/TsaD family syc0299_c 0bbaf1d49c0785f64c3103949ba40bfb 349 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 4.2E-48 T 11-10-2018 IPR017861 Kae1/TsaD family syc0299_c 0bbaf1d49c0785f64c3103949ba40bfb 349 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 5 18 4.2E-48 T 11-10-2018 IPR017861 Kae1/TsaD family syc0299_c 0bbaf1d49c0785f64c3103949ba40bfb 349 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 5 313 1.8E-109 T 11-10-2018 IPR017861 Kae1/TsaD family syc0299_c 0bbaf1d49c0785f64c3103949ba40bfb 349 SUPERFAMILY SSF53067 4 122 4.08E-29 T 11-10-2018 syc0299_c 0bbaf1d49c0785f64c3103949ba40bfb 349 Pfam PF00814 Glycoprotease family 23 313 1.2E-95 T 11-10-2018 IPR000905 Gcp-like domain syc0299_c 0bbaf1d49c0785f64c3103949ba40bfb 349 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 2 338 63.429 T 11-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 syc0299_c 0bbaf1d49c0785f64c3103949ba40bfb 349 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 4 320 3.3E-128 T 11-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 syc0299_c 0bbaf1d49c0785f64c3103949ba40bfb 349 Gene3D G3DSA:3.30.420.40 4 320 4.4E-117 T 11-10-2018 syc0299_c 0bbaf1d49c0785f64c3103949ba40bfb 349 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 11-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 syc0299_c 0bbaf1d49c0785f64c3103949ba40bfb 349 Gene3D G3DSA:3.30.420.40 129 300 4.4E-117 T 11-10-2018 syc1652_d 9fec93f826da2a2b39297cd91ca9238e 359 Gene3D G3DSA:3.30.420.40 192 325 1.4E-61 T 11-10-2018 syc1652_d 9fec93f826da2a2b39297cd91ca9238e 359 Gene3D G3DSA:3.30.1490.300 91 153 1.4E-61 T 11-10-2018 syc1652_d 9fec93f826da2a2b39297cd91ca9238e 359 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 14 359 1.8E-83 T 11-10-2018 IPR005883 Type IV pilus assembly protein PilM syc1652_d 9fec93f826da2a2b39297cd91ca9238e 359 SUPERFAMILY SSF53067 198 355 3.7E-5 T 11-10-2018 syc1652_d 9fec93f826da2a2b39297cd91ca9238e 359 Gene3D G3DSA:3.30.420.40 16 357 1.4E-61 T 11-10-2018 syc1652_d 9fec93f826da2a2b39297cd91ca9238e 359 SUPERFAMILY SSF53067 53 181 6.15E-7 T 11-10-2018 syc1652_d 9fec93f826da2a2b39297cd91ca9238e 359 PIRSF PIRSF019169 2 359 3.8E-94 T 11-10-2018 IPR005883 Type IV pilus assembly protein PilM syc1652_d 9fec93f826da2a2b39297cd91ca9238e 359 Pfam PF11104 Type IV pilus assembly protein PilM; 17 358 2.8E-43 T 11-10-2018 IPR005883 Type IV pilus assembly protein PilM syc1878_d 824a6cc97be8e1b59d38513c0db9ec05 133 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 133 33.867 T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc1878_d 824a6cc97be8e1b59d38513c0db9ec05 133 ProSitePatterns PS00053 Ribosomal protein S8 signature. 103 120 - T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc1878_d 824a6cc97be8e1b59d38513c0db9ec05 133 Gene3D G3DSA:3.30.1490.10 80 133 1.9E-28 T 11-10-2018 syc1878_d 824a6cc97be8e1b59d38513c0db9ec05 133 Gene3D G3DSA:3.30.1370.30 4 79 5.1E-26 T 11-10-2018 syc1878_d 824a6cc97be8e1b59d38513c0db9ec05 133 SUPERFAMILY SSF56047 3 133 2.88E-48 T 11-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc1878_d 824a6cc97be8e1b59d38513c0db9ec05 133 Pfam PF00410 Ribosomal protein S8 5 133 9.8E-52 T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc0162_c bce026e98abca47cbc5f59d473bac04f 304 SUPERFAMILY SSF52768 3 289 1.44E-86 T 11-10-2018 IPR023696 Ureohydrolase domain superfamily syc0162_c bce026e98abca47cbc5f59d473bac04f 304 Pfam PF00850 Histone deacetylase domain 43 280 7.0E-50 T 11-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 syc0162_c bce026e98abca47cbc5f59d473bac04f 304 Gene3D G3DSA:3.40.800.20 10 300 4.2E-71 T 11-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 syc0162_c bce026e98abca47cbc5f59d473bac04f 304 PRINTS PR01270 Histone deacetylase superfamily signature 117 140 1.7E-15 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 syc0162_c bce026e98abca47cbc5f59d473bac04f 304 PRINTS PR01270 Histone deacetylase superfamily signature 151 166 1.7E-15 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 syc0162_c bce026e98abca47cbc5f59d473bac04f 304 PRINTS PR01270 Histone deacetylase superfamily signature 225 235 1.7E-15 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 syc0681_c f3ad18f51923e6a154de5843070eb1aa 951 SUPERFAMILY SSF52172 826 948 3.42E-32 T 11-10-2018 IPR011006 CheY-like superfamily syc0681_c f3ad18f51923e6a154de5843070eb1aa 951 Pfam PF00072 Response regulator receiver domain 830 942 5.6E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 syc0681_c f3ad18f51923e6a154de5843070eb1aa 951 SUPERFAMILY SSF47226 10 126 8.64E-27 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 syc0681_c f3ad18f51923e6a154de5843070eb1aa 951 Pfam PF01627 Hpt domain 10 98 2.8E-17 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 syc0681_c f3ad18f51923e6a154de5843070eb1aa 951 Gene3D G3DSA:3.30.565.10 473 659 1.4E-52 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily syc0681_c f3ad18f51923e6a154de5843070eb1aa 951 SMART SM00073 3 100 9.1E-20 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 syc0681_c f3ad18f51923e6a154de5843070eb1aa 951 SMART SM00260 653 800 9.5E-16 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 syc0681_c f3ad18f51923e6a154de5843070eb1aa 951 SUPERFAMILY SSF55874 477 658 9.95E-37 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily syc0681_c f3ad18f51923e6a154de5843070eb1aa 951 SUPERFAMILY SSF50341 660 800 1.05E-25 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 syc0681_c f3ad18f51923e6a154de5843070eb1aa 951 Gene3D G3DSA:1.20.120.160 4 140 9.8E-31 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 syc0681_c f3ad18f51923e6a154de5843070eb1aa 951 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 522 659 3.7E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase syc0681_c f3ad18f51923e6a154de5843070eb1aa 951 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 332 389 8.3E-7 T 11-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 syc0681_c f3ad18f51923e6a154de5843070eb1aa 951 SMART SM01231 331 393 5.7E-7 T 11-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 syc0681_c f3ad18f51923e6a154de5843070eb1aa 951 SMART SM00387 519 661 4.1E-24 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase syc0681_c f3ad18f51923e6a154de5843070eb1aa 951 Gene3D G3DSA:3.40.50.12740 827 951 5.2E-32 T 11-10-2018 syc0681_c f3ad18f51923e6a154de5843070eb1aa 951 SMART SM00448 828 942 1.6E-34 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 syc0681_c f3ad18f51923e6a154de5843070eb1aa 951 Gene3D G3DSA:2.30.30.40 661 795 4.0E-22 T 11-10-2018 syc0681_c f3ad18f51923e6a154de5843070eb1aa 951 Gene3D G3DSA:2.40.50.180 684 755 4.0E-22 T 11-10-2018 syc0681_c f3ad18f51923e6a154de5843070eb1aa 951 Pfam PF01584 CheW-like domain 666 802 1.2E-20 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 syc0681_c f3ad18f51923e6a154de5843070eb1aa 951 PRINTS PR00344 Bacterial sensor protein C-terminal signature 645 658 4.1E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 syc0681_c f3ad18f51923e6a154de5843070eb1aa 951 PRINTS PR00344 Bacterial sensor protein C-terminal signature 621 639 4.1E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 syc0681_c f3ad18f51923e6a154de5843070eb1aa 951 PRINTS PR00344 Bacterial sensor protein C-terminal signature 564 578 4.1E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 syc0681_c f3ad18f51923e6a154de5843070eb1aa 951 PRINTS PR00344 Bacterial sensor protein C-terminal signature 605 615 4.1E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 syc2013_c 8e839c564d432e678523c5b69bcdb0f3 796 ProSitePatterns PS60003 Phosphoketolase signature 2. 162 180 - T 11-10-2018 IPR019789 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, thiamine diphosphate binding site GO:0005975|GO:0016832 syc2013_c 8e839c564d432e678523c5b69bcdb0f3 796 Hamap MF_01403 Probable phosphoketolase. 10 796 40.261 T 11-10-2018 IPR023962 Probable phosphoketolase syc2013_c 8e839c564d432e678523c5b69bcdb0f3 796 Gene3D G3DSA:3.40.50.920 613 796 2.6E-74 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 syc2013_c 8e839c564d432e678523c5b69bcdb0f3 796 SUPERFAMILY SSF52518 381 595 5.0E-21 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold syc2013_c 8e839c564d432e678523c5b69bcdb0f3 796 Pfam PF09363 XFP C-terminal domain 593 794 2.6E-90 T 11-10-2018 IPR018969 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, C-terminal GO:0005975|GO:0016832 syc2013_c 8e839c564d432e678523c5b69bcdb0f3 796 Pfam PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase 404 582 1.9E-83 T 11-10-2018 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase GO:0005975|GO:0016832 syc2013_c 8e839c564d432e678523c5b69bcdb0f3 796 Gene3D G3DSA:3.40.50.970 392 612 5.9E-101 T 11-10-2018 syc2013_c 8e839c564d432e678523c5b69bcdb0f3 796 SUPERFAMILY SSF52518 8 374 1.94E-78 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold syc2013_c 8e839c564d432e678523c5b69bcdb0f3 796 PIRSF PIRSF017245 2 796 0.0 T 11-10-2018 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase GO:0005975|GO:0016832 syc2013_c 8e839c564d432e678523c5b69bcdb0f3 796 ProSitePatterns PS60002 Phosphoketolase signature 1. 149 155 - T 11-10-2018 IPR019790 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, conserved site GO:0005975|GO:0016832 syc2013_c 8e839c564d432e678523c5b69bcdb0f3 796 Pfam PF09364 XFP N-terminal domain 14 389 6.0E-188 T 11-10-2018 IPR018970 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal syc2013_c 8e839c564d432e678523c5b69bcdb0f3 796 Gene3D G3DSA:3.40.50.970 1 391 7.8E-175 T 11-10-2018 syc1251_c dc3cc7667da427be1d96855036080519 464 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 323 414 9.2E-15 T 11-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 syc1251_c dc3cc7667da427be1d96855036080519 464 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 39 456 3.7E-145 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 syc1251_c dc3cc7667da427be1d96855036080519 464 PRINTS PR01181 Diaminopimelate decarboxylase signature 424 446 1.9E-26 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 syc1251_c dc3cc7667da427be1d96855036080519 464 PRINTS PR01181 Diaminopimelate decarboxylase signature 342 360 1.9E-26 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 syc1251_c dc3cc7667da427be1d96855036080519 464 PRINTS PR01181 Diaminopimelate decarboxylase signature 111 128 1.9E-26 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 syc1251_c dc3cc7667da427be1d96855036080519 464 PRINTS PR01181 Diaminopimelate decarboxylase signature 199 208 1.9E-26 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 syc1251_c dc3cc7667da427be1d96855036080519 464 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 313 332 3.1E-18 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 syc1251_c dc3cc7667da427be1d96855036080519 464 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 225 238 3.1E-18 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 syc1251_c dc3cc7667da427be1d96855036080519 464 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 93 111 3.1E-18 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 syc1251_c dc3cc7667da427be1d96855036080519 464 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 113 125 3.1E-18 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 syc1251_c dc3cc7667da427be1d96855036080519 464 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 414 427 3.1E-18 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 syc1251_c dc3cc7667da427be1d96855036080519 464 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 70 322 9.0E-53 T 11-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 syc1251_c dc3cc7667da427be1d96855036080519 464 Gene3D G3DSA:3.20.20.10 67 323 8.4E-147 T 11-10-2018 IPR029066 PLP-binding barrel syc1251_c dc3cc7667da427be1d96855036080519 464 SUPERFAMILY SSF51419 59 325 2.75E-77 T 11-10-2018 IPR029066 PLP-binding barrel syc1251_c dc3cc7667da427be1d96855036080519 464 SUPERFAMILY SSF50621 300 459 1.47E-48 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 syc1251_c dc3cc7667da427be1d96855036080519 464 Gene3D G3DSA:2.40.37.10 46 453 8.4E-147 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 syc1251_c dc3cc7667da427be1d96855036080519 464 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 48 457 37.285 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 syc0218_c f62147575369b76770f5fd0038833d0f 308 Pfam PF16261 Domain of unknown function (DUF4915) 20 298 2.0E-125 T 11-10-2018 IPR017481 Conserved hypothetical protein CHP03032 syc0218_c f62147575369b76770f5fd0038833d0f 308 TIGRFAM TIGR03032 TIGR03032: TIGR03032 family protein 14 298 2.4E-137 T 11-10-2018 IPR017481 Conserved hypothetical protein CHP03032 syc0218_c f62147575369b76770f5fd0038833d0f 308 SUPERFAMILY SSF63825 168 276 3.53E-5 T 11-10-2018 syc2048_d 59bac93727daa5dd73dfdd9a8924148d 1167 Gene3D G3DSA:3.30.70.1620 574 656 8.6E-48 T 11-10-2018 syc2048_d 59bac93727daa5dd73dfdd9a8924148d 1167 Pfam PF02463 RecF/RecN/SMC N terminal domain 843 1158 6.7E-33 T 11-10-2018 IPR003395 RecF/RecN/SMC, N-terminal syc2048_d 59bac93727daa5dd73dfdd9a8924148d 1167 SMART SM00968 514 631 6.4E-43 T 11-10-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 syc2048_d 59bac93727daa5dd73dfdd9a8924148d 1167 PIRSF PIRSF005719 1 1166 6.8E-227 T 11-10-2018 IPR024704 Structural maintenance of chromosomes protein syc2048_d 59bac93727daa5dd73dfdd9a8924148d 1167 SUPERFAMILY SSF52540 1 1151 1.98E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc2048_d 59bac93727daa5dd73dfdd9a8924148d 1167 Pfam PF02463 RecF/RecN/SMC N terminal domain 1 764 5.1E-20 T 11-10-2018 IPR003395 RecF/RecN/SMC, N-terminal syc2048_d 59bac93727daa5dd73dfdd9a8924148d 1167 Pfam PF06470 SMC proteins Flexible Hinge Domain 514 630 2.5E-29 T 11-10-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 syc2048_d 59bac93727daa5dd73dfdd9a8924148d 1167 SUPERFAMILY SSF75553 475 662 2.09E-50 T 11-10-2018 IPR036277 SMCs flexible hinge superfamily GO:0005515|GO:0005524|GO:0005694|GO:0051276 syc2048_d 59bac93727daa5dd73dfdd9a8924148d 1167 Gene3D G3DSA:1.20.1060.20 509 660 8.6E-48 T 11-10-2018 syc2048_d 59bac93727daa5dd73dfdd9a8924148d 1167 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1167 20.316 T 11-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 syc2048_d 59bac93727daa5dd73dfdd9a8924148d 1167 Gene3D G3DSA:3.40.50.300 1 170 1.1E-33 T 11-10-2018 syc2048_d 59bac93727daa5dd73dfdd9a8924148d 1167 TIGRFAM TIGR02169 SMC_prok_A: chromosome segregation protein SMC 1 1164 0.0 T 11-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 syc2048_d 59bac93727daa5dd73dfdd9a8924148d 1167 Gene3D G3DSA:3.40.50.300 1016 1166 2.5E-43 T 11-10-2018 syc1790_c bcb95c8671f24b533a544473f1c0f856 363 Gene3D G3DSA:3.40.50.2000 178 337 4.3E-43 T 11-10-2018 syc1790_c bcb95c8671f24b533a544473f1c0f856 363 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 14 363 32.904 T 11-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 syc1790_c bcb95c8671f24b533a544473f1c0f856 363 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 15 147 1.2E-33 T 11-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 syc1790_c bcb95c8671f24b533a544473f1c0f856 363 Gene3D G3DSA:3.40.50.2000 7 177 2.9E-48 T 11-10-2018 syc1790_c bcb95c8671f24b533a544473f1c0f856 363 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 189 329 4.1E-35 T 11-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 syc1790_c bcb95c8671f24b533a544473f1c0f856 363 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 13 358 1.1E-82 T 11-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 syc1790_c bcb95c8671f24b533a544473f1c0f856 363 SUPERFAMILY SSF53756 13 362 1.49E-96 T 11-10-2018 syc0372_d df9d54f1a0a13994f304c83db56f69bd 349 SUPERFAMILY SSF110296 40 344 2.22E-55 T 11-10-2018 syc0372_d df9d54f1a0a13994f304c83db56f69bd 349 Gene3D G3DSA:2.130.10.10 29 206 1.3E-10 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 syc0372_d df9d54f1a0a13994f304c83db56f69bd 349 Pfam PF14870 Photosynthesis system II assembly factor YCF48 37 343 6.4E-138 T 11-10-2018 IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain syc0372_d df9d54f1a0a13994f304c83db56f69bd 349 PIRSF PIRSF017875 3 347 6.8E-147 T 11-10-2018 IPR016705 Photosynthesis system II assembly factor Ycf48/Hcf136 syc0372_d df9d54f1a0a13994f304c83db56f69bd 349 Hamap MF_01348 Ycf48-like protein [hcf136]. 5 345 48.747 T 11-10-2018 IPR016705 Photosynthesis system II assembly factor Ycf48/Hcf136 syc1259_c ffbeaf6d7955bd0f740e893bcb0e0e61 856 Gene3D G3DSA:1.10.268.10 373 462 6.7E-208 T 11-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 syc1259_c ffbeaf6d7955bd0f740e893bcb0e0e61 856 Gene3D G3DSA:3.30.1360.40 236 336 6.7E-208 T 11-10-2018 syc1259_c ffbeaf6d7955bd0f740e893bcb0e0e61 856 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 557 607 1.1E-8 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 syc1259_c ffbeaf6d7955bd0f740e893bcb0e0e61 856 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 508 552 7.8E-13 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 syc1259_c ffbeaf6d7955bd0f740e893bcb0e0e61 856 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 613 656 7.2E-8 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 syc1259_c ffbeaf6d7955bd0f740e893bcb0e0e61 856 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 789 836 5.1E-8 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 syc1259_c ffbeaf6d7955bd0f740e893bcb0e0e61 856 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 661 709 7.2E-11 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 syc1259_c ffbeaf6d7955bd0f740e893bcb0e0e61 856 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 739 785 8.3E-12 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 syc1259_c ffbeaf6d7955bd0f740e893bcb0e0e61 856 Gene3D G3DSA:2.120.10.90 500 836 4.9E-110 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal syc1259_c ffbeaf6d7955bd0f740e893bcb0e0e61 856 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 7 835 0.0 T 11-10-2018 syc1259_c ffbeaf6d7955bd0f740e893bcb0e0e61 856 SUPERFAMILY SSF101904 502 845 1.14E-93 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal syc1259_c ffbeaf6d7955bd0f740e893bcb0e0e61 856 Gene3D G3DSA:3.90.199.10 31 488 6.7E-208 T 11-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 syc1259_c ffbeaf6d7955bd0f740e893bcb0e0e61 856 SMART SM00434 10 468 1.6E-279 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 syc1259_c ffbeaf6d7955bd0f740e893bcb0e0e61 856 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 31 474 1.3E-156 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 syc1259_c ffbeaf6d7955bd0f740e893bcb0e0e61 856 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 4 837 23.26 T 11-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 syc1259_c ffbeaf6d7955bd0f740e893bcb0e0e61 856 SUPERFAMILY SSF56719 29 490 1.44E-173 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 syc2021_c 602101fcaabe4514d6399befb81c8bee 214 Gene3D G3DSA:2.30.22.10 147 202 2.1E-18 T 11-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 syc2021_c 602101fcaabe4514d6399befb81c8bee 214 SUPERFAMILY SSF51064 149 202 1.31E-15 T 11-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 syc2021_c 602101fcaabe4514d6399befb81c8bee 214 ProSitePatterns PS01071 grpE protein signature. 158 201 - T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 syc2021_c 602101fcaabe4514d6399befb81c8bee 214 Gene3D G3DSA:3.90.20.20 22 146 3.5E-22 T 11-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 syc2021_c 602101fcaabe4514d6399befb81c8bee 214 Pfam PF01025 GrpE 43 202 9.1E-43 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 syc2021_c 602101fcaabe4514d6399befb81c8bee 214 Hamap MF_01151 Protein GrpE [grpE]. 9 203 17.821 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 syc2021_c 602101fcaabe4514d6399befb81c8bee 214 SUPERFAMILY SSF58014 55 147 4.05E-24 T 11-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 syc2021_c 602101fcaabe4514d6399befb81c8bee 214 PRINTS PR00773 GrpE protein signature 72 88 1.4E-25 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 syc2021_c 602101fcaabe4514d6399befb81c8bee 214 PRINTS PR00773 GrpE protein signature 182 201 1.4E-25 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 syc2021_c 602101fcaabe4514d6399befb81c8bee 214 PRINTS PR00773 GrpE protein signature 100 115 1.4E-25 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 syc2021_c 602101fcaabe4514d6399befb81c8bee 214 PRINTS PR00773 GrpE protein signature 155 170 1.4E-25 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 syc0412_c d0deec36ccf6db0853867e5ee4e67000 283 Pfam PF01171 PP-loop family 4 162 9.7E-36 T 11-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 syc0412_c d0deec36ccf6db0853867e5ee4e67000 283 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 2 167 3.6E-46 T 11-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 syc0412_c d0deec36ccf6db0853867e5ee4e67000 283 SUPERFAMILY SSF82829 174 276 1.7E-20 T 11-10-2018 syc0412_c d0deec36ccf6db0853867e5ee4e67000 283 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 1 270 17.671 T 11-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 syc0412_c d0deec36ccf6db0853867e5ee4e67000 283 Pfam PF09179 TilS substrate binding domain 211 269 7.2E-8 T 11-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 syc0412_c d0deec36ccf6db0853867e5ee4e67000 283 Gene3D G3DSA:3.40.50.620 1 174 7.0E-46 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold syc0412_c d0deec36ccf6db0853867e5ee4e67000 283 SUPERFAMILY SSF52402 3 196 4.45E-46 T 11-10-2018 syc0412_c d0deec36ccf6db0853867e5ee4e67000 283 Gene3D G3DSA:1.20.59.20 177 280 3.7E-8 T 11-10-2018 syc0461_c 80919e02f4cd0d47582f8d251d45aed7 125 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 38 125 5.0E-24 T 11-10-2018 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 syc0461_c 80919e02f4cd0d47582f8d251d45aed7 125 TIGRFAM TIGR02656 cyanin_plasto: plastocyanin 37 125 2.9E-40 T 11-10-2018 IPR002387 Plastocyanin GO:0005507|GO:0009055 syc0461_c 80919e02f4cd0d47582f8d251d45aed7 125 PRINTS PR00157 Plastocyanin signature 104 123 3.0E-21 T 11-10-2018 IPR002387 Plastocyanin GO:0005507|GO:0009055 syc0461_c 80919e02f4cd0d47582f8d251d45aed7 125 PRINTS PR00157 Plastocyanin signature 42 61 3.0E-21 T 11-10-2018 IPR002387 Plastocyanin GO:0005507|GO:0009055 syc0461_c 80919e02f4cd0d47582f8d251d45aed7 125 PRINTS PR00157 Plastocyanin signature 65 83 3.0E-21 T 11-10-2018 IPR002387 Plastocyanin GO:0005507|GO:0009055 syc0461_c 80919e02f4cd0d47582f8d251d45aed7 125 Gene3D G3DSA:2.60.40.420 35 124 2.8E-33 T 11-10-2018 IPR008972 Cupredoxin syc0461_c 80919e02f4cd0d47582f8d251d45aed7 125 Hamap MF_00566 Plastocyanin [petE]. 35 125 31.871 T 11-10-2018 IPR023511 Plastocyanin, cyanobacteria syc0461_c 80919e02f4cd0d47582f8d251d45aed7 125 ProSitePatterns PS00196 Type-1 copper (blue) proteins signature. 104 118 - T 11-10-2018 IPR028871 Blue (type 1) copper protein, binding site syc0461_c 80919e02f4cd0d47582f8d251d45aed7 125 SUPERFAMILY SSF49503 35 124 5.47E-29 T 11-10-2018 IPR008972 Cupredoxin syc0461_c 80919e02f4cd0d47582f8d251d45aed7 125 PRINTS PR00156 Type I copper blue protein family signature 102 116 8.0E-7 T 11-10-2018 IPR001235 Blue (type 1) copper protein, plastocyanin-type GO:0005507|GO:0009055 syc0461_c 80919e02f4cd0d47582f8d251d45aed7 125 PRINTS PR00156 Type I copper blue protein family signature 56 69 8.0E-7 T 11-10-2018 IPR001235 Blue (type 1) copper protein, plastocyanin-type GO:0005507|GO:0009055 syc0602_d 5590171cb32fc46e2f8e194e2307f248 116 SUPERFAMILY SSF47413 42 92 5.63E-7 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 syc0602_d 5590171cb32fc46e2f8e194e2307f248 116 Pfam PF13560 Helix-turn-helix domain 17 90 1.1E-7 T 11-10-2018 syc0602_d 5590171cb32fc46e2f8e194e2307f248 116 Gene3D G3DSA:1.10.260.40 39 93 8.5E-7 T 11-10-2018 syc0602_d 5590171cb32fc46e2f8e194e2307f248 116 SMART SM00530 15 90 2.8E-5 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 syc1730_c 8887de3bbba69d441d5c6b4328e523e5 347 SUPERFAMILY SSF56059 128 346 3.01E-59 T 11-10-2018 syc1730_c 8887de3bbba69d441d5c6b4328e523e5 347 SUPERFAMILY SSF52440 4 127 2.11E-34 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily syc1730_c 8887de3bbba69d441d5c6b4328e523e5 347 Pfam PF07478 D-ala D-ala ligase C-terminus 137 342 3.4E-76 T 11-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 syc1730_c 8887de3bbba69d441d5c6b4328e523e5 347 Gene3D G3DSA:3.30.1490.20 143 218 1.8E-80 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 syc1730_c 8887de3bbba69d441d5c6b4328e523e5 347 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 5 344 6.7E-112 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 syc1730_c 8887de3bbba69d441d5c6b4328e523e5 347 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 4 345 41.223 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 syc1730_c 8887de3bbba69d441d5c6b4328e523e5 347 Gene3D G3DSA:3.30.470.20 118 347 1.8E-80 T 11-10-2018 syc1730_c 8887de3bbba69d441d5c6b4328e523e5 347 Pfam PF01820 D-ala D-ala ligase N-terminus 5 118 6.6E-29 T 11-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 syc1730_c 8887de3bbba69d441d5c6b4328e523e5 347 PIRSF PIRSF039102 2 347 1.8E-108 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 syc1730_c 8887de3bbba69d441d5c6b4328e523e5 347 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 95 106 - T 11-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 syc1730_c 8887de3bbba69d441d5c6b4328e523e5 347 Gene3D G3DSA:3.40.50.20 2 117 2.4E-30 T 11-10-2018 syc1730_c 8887de3bbba69d441d5c6b4328e523e5 347 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 287 315 - T 11-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 syc1264_c 0fafffd02746a91f7a2524c06dd2fb57 261 Gene3D G3DSA:3.40.50.300 20 261 1.5E-77 T 11-10-2018 syc1264_c 0fafffd02746a91f7a2524c06dd2fb57 261 SUPERFAMILY SSF52540 21 256 1.19E-79 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc1264_c 0fafffd02746a91f7a2524c06dd2fb57 261 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 syc1264_c 0fafffd02746a91f7a2524c06dd2fb57 261 PIRSF PIRSF039085 18 261 1.3E-106 T 11-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 syc1264_c 0fafffd02746a91f7a2524c06dd2fb57 261 SMART SM00382 47 241 6.6E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain syc1264_c 0fafffd02746a91f7a2524c06dd2fb57 261 Pfam PF00005 ABC transporter 40 186 7.7E-38 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 syc0230_c 3953b020664573f2d58f1e74810e32cf 239 SUPERFAMILY SSF81624 3 106 4.71E-24 T 11-10-2018 IPR035937 MutM-like, N-terminal syc0230_c 3953b020664573f2d58f1e74810e32cf 239 Pfam PF06827 Zinc finger found in FPG and IleRS 210 237 2.3E-12 T 11-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 syc0230_c 3953b020664573f2d58f1e74810e32cf 239 SMART SM01232 97 189 9.4E-50 T 11-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 syc0230_c 3953b020664573f2d58f1e74810e32cf 239 Gene3D G3DSA:3.20.190.10 1 91 1.1E-20 T 11-10-2018 IPR035937 MutM-like, N-terminal syc0230_c 3953b020664573f2d58f1e74810e32cf 239 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 2 78 4.6E-19 T 11-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 syc0230_c 3953b020664573f2d58f1e74810e32cf 239 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 97 185 3.6E-28 T 11-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 syc0230_c 3953b020664573f2d58f1e74810e32cf 239 SUPERFAMILY SSF46946 96 186 2.62E-31 T 11-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 syc0230_c 3953b020664573f2d58f1e74810e32cf 239 Gene3D G3DSA:1.10.8.50 99 237 8.5E-50 T 11-10-2018 syc0230_c 3953b020664573f2d58f1e74810e32cf 239 SMART SM00898 1 79 5.7E-13 T 11-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 syc0230_c 3953b020664573f2d58f1e74810e32cf 239 SUPERFAMILY SSF57716 186 237 1.28E-17 T 11-10-2018 syc0230_c 3953b020664573f2d58f1e74810e32cf 239 ProSitePatterns PS01242 Zinc finger FPG-type signature. 212 236 - T 11-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 syc0230_c 3953b020664573f2d58f1e74810e32cf 239 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 3 236 4.0E-81 T 11-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 syc1885_d b644c6207ef89966e887b9a0ed302f80 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 5.9E-22 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc1885_d b644c6207ef89966e887b9a0ed302f80 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 37 2.0E-9 T 11-10-2018 syc1885_d b644c6207ef89966e887b9a0ed302f80 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc1885_d b644c6207ef89966e887b9a0ed302f80 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 18.65 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc1885_d b644c6207ef89966e887b9a0ed302f80 37 Pfam PF00444 Ribosomal protein L36 1 37 1.2E-19 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc1885_d b644c6207ef89966e887b9a0ed302f80 37 SUPERFAMILY SSF57840 1 37 3.79E-17 T 11-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc1468_c d14fa128919181c0a021c5a292c95288 273 SUPERFAMILY SSF53335 38 202 8.96E-28 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase syc1468_c d14fa128919181c0a021c5a292c95288 273 Pfam PF13649 Methyltransferase domain 48 140 1.7E-13 T 11-10-2018 syc1468_c d14fa128919181c0a021c5a292c95288 273 Gene3D G3DSA:3.40.50.150 37 243 7.2E-27 T 11-10-2018 syc0566_c e6d2c88f851d5a791e8cd288f2796536 403 Gene3D G3DSA:2.40.30.10 90 236 1.4E-47 T 11-10-2018 syc0566_c e6d2c88f851d5a791e8cd288f2796536 403 SMART SM01094 17 74 1.0E-27 T 11-10-2018 IPR008213 CpcD-like domain GO:0030089 syc0566_c e6d2c88f851d5a791e8cd288f2796536 403 SUPERFAMILY SSF63380 104 241 5.25E-43 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel syc0566_c e6d2c88f851d5a791e8cd288f2796536 403 PIRSF PIRSF501178 17 403 8.3E-181 T 11-10-2018 IPR035442 Ferredoxin--NADP reductase, plant and Cyanobacteria type GO:0016491|GO:0055114 KEGG: 00195+1.18.1.2|MetaCyc: PWY-101 syc0566_c e6d2c88f851d5a791e8cd288f2796536 403 PIRSF PIRSF000361 36 403 2.4E-130 T 11-10-2018 IPR015701 Ferredoxin--NADP reductase GO:0016491|GO:0055114 KEGG: 00195+1.18.1.2|MetaCyc: PWY-101 syc0566_c e6d2c88f851d5a791e8cd288f2796536 403 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 251 270 1.1E-27 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 syc0566_c e6d2c88f851d5a791e8cd288f2796536 403 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 178 185 1.1E-27 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 syc0566_c e6d2c88f851d5a791e8cd288f2796536 403 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 285 294 1.1E-27 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 syc0566_c e6d2c88f851d5a791e8cd288f2796536 403 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 333 349 1.1E-27 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 syc0566_c e6d2c88f851d5a791e8cd288f2796536 403 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 215 224 1.1E-27 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 syc0566_c e6d2c88f851d5a791e8cd288f2796536 403 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 357 365 1.1E-27 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 syc0566_c e6d2c88f851d5a791e8cd288f2796536 403 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 155 165 1.1E-27 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 syc0566_c e6d2c88f851d5a791e8cd288f2796536 403 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 297 308 1.1E-27 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 syc0566_c e6d2c88f851d5a791e8cd288f2796536 403 Pfam PF01383 CpcD/allophycocyanin linker domain 17 73 3.3E-24 T 11-10-2018 IPR008213 CpcD-like domain GO:0030089 syc0566_c e6d2c88f851d5a791e8cd288f2796536 403 Pfam PF00175 Oxidoreductase NAD-binding domain 252 370 1.4E-32 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 syc0566_c e6d2c88f851d5a791e8cd288f2796536 403 Gene3D G3DSA:3.40.50.80 237 403 3.0E-47 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain syc0566_c e6d2c88f851d5a791e8cd288f2796536 403 SUPERFAMILY SSF52343 242 403 2.23E-44 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain syc2519_d e3df03f0f722c0563cde105159246ec6 253 Gene3D G3DSA:3.10.20.30 4 121 5.5E-23 T 11-10-2018 IPR012675 Beta-grasp domain superfamily syc2519_d e3df03f0f722c0563cde105159246ec6 253 Gene3D G3DSA:1.10.1060.10 137 249 1.4E-12 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 syc2519_d e3df03f0f722c0563cde105159246ec6 253 SUPERFAMILY SSF54292 7 121 4.99E-19 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 syc2519_d e3df03f0f722c0563cde105159246ec6 253 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 9 125 9.2E-21 T 11-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 syc2519_d e3df03f0f722c0563cde105159246ec6 253 Pfam PF13183 4Fe-4S dicluster domain 162 233 1.6E-8 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain syc2519_d e3df03f0f722c0563cde105159246ec6 253 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 63 71 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 syc2519_d e3df03f0f722c0563cde105159246ec6 253 SUPERFAMILY SSF46548 124 244 4.88E-19 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 syc1818_d 90a6b8d1d32d32fb31817ff1228c6aef 637 Pfam PF00512 His Kinase A (phospho-acceptor) domain 400 466 6.6E-13 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 syc1818_d 90a6b8d1d32d32fb31817ff1228c6aef 637 SUPERFAMILY SSF55874 456 627 8.91E-41 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily syc1818_d 90a6b8d1d32d32fb31817ff1228c6aef 637 Gene3D G3DSA:3.30.565.10 468 630 1.9E-39 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily syc1818_d 90a6b8d1d32d32fb31817ff1228c6aef 637 Pfam PF01590 GAF domain 244 384 6.1E-13 T 11-10-2018 IPR003018 GAF domain GO:0005515 syc1818_d 90a6b8d1d32d32fb31817ff1228c6aef 637 Gene3D G3DSA:1.10.287.130 396 467 9.6E-15 T 11-10-2018 syc1818_d 90a6b8d1d32d32fb31817ff1228c6aef 637 Pfam PF10069 Sensory domain in DIguanylate Cyclases and Two-component system 5 127 9.9E-31 T 11-10-2018 IPR019278 DICT domain syc1818_d 90a6b8d1d32d32fb31817ff1228c6aef 637 Pfam PF17150 C-terminal domain of two-partite extracellular sensor domain 139 216 1.1E-23 T 11-10-2018 IPR033415 C-terminal domain of two-partite extracellular sensor domain syc1818_d 90a6b8d1d32d32fb31817ff1228c6aef 637 PRINTS PR00344 Bacterial sensor protein C-terminal signature 569 579 6.3E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 syc1818_d 90a6b8d1d32d32fb31817ff1228c6aef 637 PRINTS PR00344 Bacterial sensor protein C-terminal signature 611 624 6.3E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 syc1818_d 90a6b8d1d32d32fb31817ff1228c6aef 637 PRINTS PR00344 Bacterial sensor protein C-terminal signature 551 565 6.3E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 syc1818_d 90a6b8d1d32d32fb31817ff1228c6aef 637 PRINTS PR00344 Bacterial sensor protein C-terminal signature 586 604 6.3E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 syc1818_d 90a6b8d1d32d32fb31817ff1228c6aef 637 SMART SM00387 513 627 1.7E-38 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase syc1818_d 90a6b8d1d32d32fb31817ff1228c6aef 637 SUPERFAMILY SSF55781 223 393 1.29E-22 T 11-10-2018 syc1818_d 90a6b8d1d32d32fb31817ff1228c6aef 637 SMART SM00065 243 394 3.2E-15 T 11-10-2018 IPR003018 GAF domain GO:0005515 syc1818_d 90a6b8d1d32d32fb31817ff1228c6aef 637 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 514 626 5.0E-28 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase syc1818_d 90a6b8d1d32d32fb31817ff1228c6aef 637 SUPERFAMILY SSF47384 387 467 3.53E-15 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 syc1818_d 90a6b8d1d32d32fb31817ff1228c6aef 637 Gene3D G3DSA:3.30.450.40 211 395 1.7E-25 T 11-10-2018 IPR029016 GAF-like domain superfamily syc1818_d 90a6b8d1d32d32fb31817ff1228c6aef 637 SMART SM00388 399 466 1.1E-15 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 syc1354_c 6d99c7b2ba3cdafa288c713a31a2ad74 796 Gene3D G3DSA:1.10.10.10 127 231 4.5E-13 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily syc1354_c 6d99c7b2ba3cdafa288c713a31a2ad74 796 SUPERFAMILY SSF52172 5 187 7.12E-13 T 11-10-2018 IPR011006 CheY-like superfamily syc1354_c 6d99c7b2ba3cdafa288c713a31a2ad74 796 SUPERFAMILY SSF46894 127 227 6.52E-14 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 syc1354_c 6d99c7b2ba3cdafa288c713a31a2ad74 796 Pfam PF00990 Diguanylate cyclase, GGDEF domain 675 777 1.3E-9 T 11-10-2018 IPR000160 GGDEF domain syc1354_c 6d99c7b2ba3cdafa288c713a31a2ad74 796 SUPERFAMILY SSF55073 625 782 4.55E-16 T 11-10-2018 IPR029787 Nucleotide cyclase syc1354_c 6d99c7b2ba3cdafa288c713a31a2ad74 796 Pfam PF00072 Response regulator receiver domain 495 606 3.3E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 syc1354_c 6d99c7b2ba3cdafa288c713a31a2ad74 796 Gene3D G3DSA:3.40.50.2300 486 618 5.1E-30 T 11-10-2018 syc1354_c 6d99c7b2ba3cdafa288c713a31a2ad74 796 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 96 107 - T 11-10-2018 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 syc1354_c 6d99c7b2ba3cdafa288c713a31a2ad74 796 SMART SM00267 609 782 1.2E-9 T 11-10-2018 IPR000160 GGDEF domain syc1354_c 6d99c7b2ba3cdafa288c713a31a2ad74 796 SUPERFAMILY SSF47226 253 348 2.49E-5 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 syc1354_c 6d99c7b2ba3cdafa288c713a31a2ad74 796 Gene3D G3DSA:3.30.70.270 619 787 4.2E-20 T 11-10-2018 syc1354_c 6d99c7b2ba3cdafa288c713a31a2ad74 796 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 224 1.1E-6 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 syc1354_c 6d99c7b2ba3cdafa288c713a31a2ad74 796 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 616 782 4.2E-13 T 11-10-2018 IPR000160 GGDEF domain syc1354_c 6d99c7b2ba3cdafa288c713a31a2ad74 796 SUPERFAMILY SSF52172 490 621 2.42E-34 T 11-10-2018 IPR011006 CheY-like superfamily syc1354_c 6d99c7b2ba3cdafa288c713a31a2ad74 796 Gene3D G3DSA:3.40.50.2300 2 126 2.6E-9 T 11-10-2018 syc1354_c 6d99c7b2ba3cdafa288c713a31a2ad74 796 SMART SM00448 493 606 3.0E-32 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 syc1354_c 6d99c7b2ba3cdafa288c713a31a2ad74 796 SMART SM00448 3 119 0.045 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 syc0227_c 7279ee059499bb23affba550eb74fae1 1153 SMART SM00487 601 791 6.4E-33 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain syc0227_c 7279ee059499bb23affba550eb74fae1 1153 SUPERFAMILY SSF52540 783 990 5.23E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0227_c 7279ee059499bb23affba550eb74fae1 1153 SUPERFAMILY SSF52540 24 342 3.72E-77 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0227_c 7279ee059499bb23affba550eb74fae1 1153 Gene3D G3DSA:2.30.30.840 485 542 3.6E-229 T 11-10-2018 syc0227_c 7279ee059499bb23affba550eb74fae1 1153 Gene3D G3DSA:3.40.50.300 543 782 3.6E-229 T 11-10-2018 syc0227_c 7279ee059499bb23affba550eb74fae1 1153 SUPERFAMILY SSF143517 989 1144 4.45E-33 T 11-10-2018 IPR037235 TRCF-like, C-terminal domain syc0227_c 7279ee059499bb23affba550eb74fae1 1153 Gene3D G3DSA:3.40.50.300 481 990 3.6E-229 T 11-10-2018 syc0227_c 7279ee059499bb23affba550eb74fae1 1153 Pfam PF03461 TRCF domain 1006 1086 4.1E-18 T 11-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 syc0227_c 7279ee059499bb23affba550eb74fae1 1153 Gene3D G3DSA:3.90.1150.50 1000 1142 3.2E-23 T 11-10-2018 IPR037235 TRCF-like, C-terminal domain syc0227_c 7279ee059499bb23affba550eb74fae1 1153 Gene3D G3DSA:3.30.2060.10 141 226 1.4E-57 T 11-10-2018 syc0227_c 7279ee059499bb23affba550eb74fae1 1153 SMART SM00490 827 911 7.5E-22 T 11-10-2018 IPR001650 Helicase, C-terminal syc0227_c 7279ee059499bb23affba550eb74fae1 1153 Gene3D G3DSA:3.40.50.11180 38 314 1.4E-57 T 11-10-2018 syc0227_c 7279ee059499bb23affba550eb74fae1 1153 SMART SM01058 481 577 1.5E-38 T 11-10-2018 IPR003711 CarD-like/TRCF domain syc0227_c 7279ee059499bb23affba550eb74fae1 1153 Pfam PF02559 CarD-like/TRCF domain 482 576 4.7E-25 T 11-10-2018 IPR003711 CarD-like/TRCF domain syc0227_c 7279ee059499bb23affba550eb74fae1 1153 SMART SM00982 1004 1101 2.5E-30 T 11-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 syc0227_c 7279ee059499bb23affba550eb74fae1 1153 Pfam PF00271 Helicase conserved C-terminal domain 808 911 2.7E-17 T 11-10-2018 IPR001650 Helicase, C-terminal syc0227_c 7279ee059499bb23affba550eb74fae1 1153 SUPERFAMILY SSF141259 476 548 9.42E-18 T 11-10-2018 IPR036101 CarD-like/TRCF domain superfamily syc0227_c 7279ee059499bb23affba550eb74fae1 1153 SUPERFAMILY SSF52540 542 785 6.03E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0227_c 7279ee059499bb23affba550eb74fae1 1153 Pfam PF00270 DEAD/DEAH box helicase 609 765 5.8E-17 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 syc0227_c 7279ee059499bb23affba550eb74fae1 1153 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 44 1091 26.814 T 11-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 syc0227_c 7279ee059499bb23affba550eb74fae1 1153 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 160 1075 0.0 T 11-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 syc0737_c 097aaf9677dc6acd39afbc85767eb09c 229 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 189 196 - T 11-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 syc0737_c 097aaf9677dc6acd39afbc85767eb09c 229 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 30 114 3.6E-32 T 11-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 syc0737_c 097aaf9677dc6acd39afbc85767eb09c 229 PIRSF PIRSF000349 7 229 4.3E-82 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 syc0737_c 097aaf9677dc6acd39afbc85767eb09c 229 Gene3D G3DSA:1.10.287.990 48 114 1.3E-22 T 11-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 syc0737_c 097aaf9677dc6acd39afbc85767eb09c 229 PRINTS PR01703 Manganese superoxide dismutase signature 98 111 1.2E-22 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 syc0737_c 097aaf9677dc6acd39afbc85767eb09c 229 PRINTS PR01703 Manganese superoxide dismutase signature 55 68 1.2E-22 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 syc0737_c 097aaf9677dc6acd39afbc85767eb09c 229 PRINTS PR01703 Manganese superoxide dismutase signature 187 199 1.2E-22 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 syc0737_c 097aaf9677dc6acd39afbc85767eb09c 229 PRINTS PR01703 Manganese superoxide dismutase signature 151 159 1.2E-22 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 syc0737_c 097aaf9677dc6acd39afbc85767eb09c 229 PRINTS PR01703 Manganese superoxide dismutase signature 34 45 1.2E-22 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 syc0737_c 097aaf9677dc6acd39afbc85767eb09c 229 Gene3D G3DSA:2.40.500.20 116 229 1.3E-46 T 11-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 syc0737_c 097aaf9677dc6acd39afbc85767eb09c 229 SUPERFAMILY SSF54719 117 227 1.31E-46 T 11-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 syc0737_c 097aaf9677dc6acd39afbc85767eb09c 229 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 122 222 7.3E-39 T 11-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 syc0737_c 097aaf9677dc6acd39afbc85767eb09c 229 SUPERFAMILY SSF46609 28 116 8.38E-33 T 11-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 syc1279_d ce006cc6bd2e1cb98a99c640fd4b1a2d 330 Pfam PF12697 Alpha/beta hydrolase family 64 315 2.4E-17 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 syc1279_d ce006cc6bd2e1cb98a99c640fd4b1a2d 330 Gene3D G3DSA:3.40.50.1820 33 324 2.8E-53 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold syc1279_d ce006cc6bd2e1cb98a99c640fd4b1a2d 330 SUPERFAMILY SSF53474 39 322 2.12E-56 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold syc1229_d 8cfc61caa5e54be7f8550895af4b3b2f 334 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 109 127 - T 11-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 syc1229_d 8cfc61caa5e54be7f8550895af4b3b2f 334 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 21 331 4.8E-103 T 11-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 syc1229_d 8cfc61caa5e54be7f8550895af4b3b2f 334 SUPERFAMILY SSF51395 29 330 5.13E-78 T 11-10-2018 syc1229_d 8cfc61caa5e54be7f8550895af4b3b2f 334 PIRSF PIRSF006621 18 334 6.4E-94 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 syc1229_d 8cfc61caa5e54be7f8550895af4b3b2f 334 Gene3D G3DSA:3.20.20.70 27 253 8.3E-74 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 syc1229_d 8cfc61caa5e54be7f8550895af4b3b2f 334 Pfam PF01207 Dihydrouridine synthase (Dus) 33 329 1.6E-91 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 syc0979_c fb05c45bbb3e17a3804f5abbbca32aa9 297 Hamap MF_00206 Lipoyl synthase [lipA]. 1 289 147.568 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 syc0979_c fb05c45bbb3e17a3804f5abbbca32aa9 297 TIGRFAM TIGR00510 lipA: lipoyl synthase 4 284 6.6E-117 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 syc0979_c fb05c45bbb3e17a3804f5abbbca32aa9 297 SMART SM00729 50 255 2.5E-13 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 syc0979_c fb05c45bbb3e17a3804f5abbbca32aa9 297 Gene3D G3DSA:3.20.20.70 51 268 2.1E-19 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 syc0979_c fb05c45bbb3e17a3804f5abbbca32aa9 297 Pfam PF04055 Radical SAM superfamily 56 215 3.8E-15 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 syc0979_c fb05c45bbb3e17a3804f5abbbca32aa9 297 SUPERFAMILY SSF102114 19 286 2.75E-62 T 11-10-2018 syc0979_c fb05c45bbb3e17a3804f5abbbca32aa9 297 PIRSF PIRSF005963 1 293 3.1E-129 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 syc0682_c f10bd0c54dc96d0f94ef80a49efd03ae 1406 Pfam PF01590 GAF domain 561 701 2.5E-15 T 11-10-2018 IPR003018 GAF domain GO:0005515 syc0682_c f10bd0c54dc96d0f94ef80a49efd03ae 1406 Pfam PF01590 GAF domain 906 1046 1.5E-15 T 11-10-2018 IPR003018 GAF domain GO:0005515 syc0682_c f10bd0c54dc96d0f94ef80a49efd03ae 1406 Pfam PF01590 GAF domain 219 357 8.0E-15 T 11-10-2018 IPR003018 GAF domain GO:0005515 syc0682_c f10bd0c54dc96d0f94ef80a49efd03ae 1406 Pfam PF01590 GAF domain 389 529 2.6E-15 T 11-10-2018 IPR003018 GAF domain GO:0005515 syc0682_c f10bd0c54dc96d0f94ef80a49efd03ae 1406 Pfam PF01590 GAF domain 736 874 3.7E-14 T 11-10-2018 IPR003018 GAF domain GO:0005515 syc0682_c f10bd0c54dc96d0f94ef80a49efd03ae 1406 SMART SM00283 1140 1401 1.3E-81 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 syc0682_c f10bd0c54dc96d0f94ef80a49efd03ae 1406 SUPERFAMILY SSF58104 1095 1403 4.45E-67 T 11-10-2018 syc0682_c f10bd0c54dc96d0f94ef80a49efd03ae 1406 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 1185 1367 7.3E-45 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 syc0682_c f10bd0c54dc96d0f94ef80a49efd03ae 1406 Gene3D G3DSA:1.10.287.950 1109 1406 1.5E-64 T 11-10-2018 syc0682_c f10bd0c54dc96d0f94ef80a49efd03ae 1406 SUPERFAMILY SSF55781 199 366 9.6E-51 T 11-10-2018 syc0682_c f10bd0c54dc96d0f94ef80a49efd03ae 1406 SUPERFAMILY SSF55781 371 538 1.31E-51 T 11-10-2018 syc0682_c f10bd0c54dc96d0f94ef80a49efd03ae 1406 SMART SM00065 389 540 3.8E-24 T 11-10-2018 IPR003018 GAF domain GO:0005515 syc0682_c f10bd0c54dc96d0f94ef80a49efd03ae 1406 SMART SM00065 561 712 6.8E-23 T 11-10-2018 IPR003018 GAF domain GO:0005515 syc0682_c f10bd0c54dc96d0f94ef80a49efd03ae 1406 SMART SM00065 733 884 9.8E-22 T 11-10-2018 IPR003018 GAF domain GO:0005515 syc0682_c f10bd0c54dc96d0f94ef80a49efd03ae 1406 SMART SM00065 905 1056 4.5E-26 T 11-10-2018 IPR003018 GAF domain GO:0005515 syc0682_c f10bd0c54dc96d0f94ef80a49efd03ae 1406 SMART SM00065 217 368 1.1E-23 T 11-10-2018 IPR003018 GAF domain GO:0005515 syc0682_c f10bd0c54dc96d0f94ef80a49efd03ae 1406 SMART SM00304 1074 1125 0.021 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 syc0682_c f10bd0c54dc96d0f94ef80a49efd03ae 1406 SMART SM00304 133 185 1.0E-5 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 syc0682_c f10bd0c54dc96d0f94ef80a49efd03ae 1406 SUPERFAMILY SSF55781 715 882 1.37E-50 T 11-10-2018 syc0682_c f10bd0c54dc96d0f94ef80a49efd03ae 1406 SUPERFAMILY SSF55781 543 710 1.9E-50 T 11-10-2018 syc0682_c f10bd0c54dc96d0f94ef80a49efd03ae 1406 SUPERFAMILY SSF55781 887 1055 5.02E-52 T 11-10-2018 syc0682_c f10bd0c54dc96d0f94ef80a49efd03ae 1406 Gene3D G3DSA:3.30.450.40 725 887 3.0E-51 T 11-10-2018 IPR029016 GAF-like domain superfamily syc0682_c f10bd0c54dc96d0f94ef80a49efd03ae 1406 Gene3D G3DSA:3.30.450.40 161 370 2.1E-53 T 11-10-2018 IPR029016 GAF-like domain superfamily syc0682_c f10bd0c54dc96d0f94ef80a49efd03ae 1406 Gene3D G3DSA:3.30.450.40 543 720 1.3E-52 T 11-10-2018 IPR029016 GAF-like domain superfamily syc0682_c f10bd0c54dc96d0f94ef80a49efd03ae 1406 Gene3D G3DSA:3.30.450.40 371 542 1.1E-53 T 11-10-2018 IPR029016 GAF-like domain superfamily syc0682_c f10bd0c54dc96d0f94ef80a49efd03ae 1406 Gene3D G3DSA:3.30.450.40 888 1083 2.3E-54 T 11-10-2018 IPR029016 GAF-like domain superfamily syc1889_d a03011ad56061eb55cf7b4c595020d8e 116 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.357 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc1889_d a03011ad56061eb55cf7b4c595020d8e 116 Gene3D G3DSA:3.90.1030.10 1 116 8.0E-44 T 11-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc1889_d a03011ad56061eb55cf7b4c595020d8e 116 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 116 1.5E-42 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc1889_d a03011ad56061eb55cf7b4c595020d8e 116 SUPERFAMILY SSF64263 1 116 2.22E-42 T 11-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc1889_d a03011ad56061eb55cf7b4c595020d8e 116 Pfam PF01196 Ribosomal protein L17 20 115 8.5E-32 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc0375_d 9642beb67d100d29c374bf2cfa7bf991 41 Hamap MF_01317 Photosystem II reaction center protein L [psbL]. 1 41 19.291 T 11-10-2018 IPR003372 Photosystem II PsbL GO:0009523|GO:0009539|GO:0015979|GO:0016020 syc0375_d 9642beb67d100d29c374bf2cfa7bf991 41 Pfam PF02419 PsbL protein 5 33 5.3E-18 T 11-10-2018 IPR003372 Photosystem II PsbL GO:0009523|GO:0009539|GO:0015979|GO:0016020 syc0375_d 9642beb67d100d29c374bf2cfa7bf991 41 SUPERFAMILY SSF161017 5 34 1.7E-12 T 11-10-2018 IPR037266 Photosystem II PsbL superfamily GO:0015979 syc0699_c 9b0ff2ea887a5e66bc33dd40c4fd3a50 446 SUPERFAMILY SSF51905 188 430 2.46E-6 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc0699_c 9b0ff2ea887a5e66bc33dd40c4fd3a50 446 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 29 223 4.0E-26 T 11-10-2018 syc0699_c 9b0ff2ea887a5e66bc33dd40c4fd3a50 446 SUPERFAMILY SSF51905 25 271 4.12E-35 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc0699_c 9b0ff2ea887a5e66bc33dd40c4fd3a50 446 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 27 49 1.1E-6 T 11-10-2018 syc0699_c 9b0ff2ea887a5e66bc33dd40c4fd3a50 446 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 187 212 1.1E-6 T 11-10-2018 syc0699_c 9b0ff2ea887a5e66bc33dd40c4fd3a50 446 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 146 155 1.1E-6 T 11-10-2018 syc0699_c 9b0ff2ea887a5e66bc33dd40c4fd3a50 446 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 28 47 4.2E-6 T 11-10-2018 syc0699_c 9b0ff2ea887a5e66bc33dd40c4fd3a50 446 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 187 205 4.2E-6 T 11-10-2018 syc0699_c 9b0ff2ea887a5e66bc33dd40c4fd3a50 446 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 161 4.2E-6 T 11-10-2018 syc0699_c 9b0ff2ea887a5e66bc33dd40c4fd3a50 446 TIGRFAM TIGR04046 MSMEG_0569_nitr: flavin-dependent oxidoreductase, MSMEG_0569 family 27 424 2.1E-197 T 11-10-2018 IPR024000 Conserved hypothetical protein CHP04046, FMN-dependent syc0699_c 9b0ff2ea887a5e66bc33dd40c4fd3a50 446 Gene3D G3DSA:3.50.50.60 315 435 5.6E-14 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc0699_c 9b0ff2ea887a5e66bc33dd40c4fd3a50 446 Gene3D G3DSA:3.50.50.60 24 313 3.4E-50 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc1954_c 4ab7296196258248a1aa97eed766ca52 341 SUPERFAMILY SSF54786 279 333 2.47E-11 T 11-10-2018 syc1954_c 4ab7296196258248a1aa97eed766ca52 341 Gene3D G3DSA:3.30.920.30 277 338 1.1E-10 T 11-10-2018 IPR038570 HicA superfamily syc1954_c 4ab7296196258248a1aa97eed766ca52 341 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 282 332 6.8E-11 T 11-10-2018 IPR012933 HicA mRNA interferase family GO:0003729 syc0619_d 6dd53765415fada914fbd9b29cd70d1e 291 TIGRFAM TIGR01694 MTAP: methylthioadenosine phosphorylase 6 247 4.9E-100 T 11-10-2018 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 Reactome: R-HSA-1237112|Reactome: R-HSA-8950505 syc0619_d 6dd53765415fada914fbd9b29cd70d1e 291 Gene3D G3DSA:3.40.50.1580 1 287 1.8E-106 T 11-10-2018 syc0619_d 6dd53765415fada914fbd9b29cd70d1e 291 Hamap MF_01963 S-methyl-5'-thioadenosine phosphorylase [mtnP]. 4 272 43.437 T 11-10-2018 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 Reactome: R-HSA-1237112|Reactome: R-HSA-8950505 syc0619_d 6dd53765415fada914fbd9b29cd70d1e 291 Pfam PF01048 Phosphorylase superfamily 5 247 5.4E-46 T 11-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 syc0619_d 6dd53765415fada914fbd9b29cd70d1e 291 SUPERFAMILY SSF53167 4 273 3.56E-90 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 syc0619_d 6dd53765415fada914fbd9b29cd70d1e 291 ProSitePatterns PS01240 Purine and other phosphorylases family 2 signature. 52 92 - T 11-10-2018 IPR018099 Purine phosphorylase, family 2, conserved site GO:0016763 syc0543_c 04a509fe4648dfbeae90decf43746a14 108 Pfam PF02531 PsaD 6 74 1.6E-35 T 11-10-2018 IPR003685 Photosystem I PsaD GO:0009522|GO:0009538|GO:0015979 syc0543_c 04a509fe4648dfbeae90decf43746a14 108 Gene3D G3DSA:3.30.1470.10 2 88 2.3E-31 T 11-10-2018 syc0543_c 04a509fe4648dfbeae90decf43746a14 108 SUPERFAMILY SSF64234 4 72 1.31E-33 T 11-10-2018 IPR036579 Photosystem I, reaction centre subunit PsaD superfamily GO:0009522|GO:0009538|GO:0015979 syc1786_c 24b4894bb615da70b9be1f566c826fea 137 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 3 81 8.8E-29 T 11-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 syc1786_c 24b4894bb615da70b9be1f566c826fea 137 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 3 131 1.6E-39 T 11-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 syc1786_c 24b4894bb615da70b9be1f566c826fea 137 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 85 132 2.6E-10 T 11-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain syc1786_c 24b4894bb615da70b9be1f566c826fea 137 Gene3D G3DSA:2.60.15.10 1 87 1.2E-32 T 11-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 syc1786_c 24b4894bb615da70b9be1f566c826fea 137 Gene3D G3DSA:1.10.287.540 88 137 4.2E-16 T 11-10-2018 syc1786_c 24b4894bb615da70b9be1f566c826fea 137 SUPERFAMILY SSF51344 1 83 3.14E-25 T 11-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 syc1786_c 24b4894bb615da70b9be1f566c826fea 137 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 1 130 25.388 T 11-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 syc1786_c 24b4894bb615da70b9be1f566c826fea 137 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 10 87 7.0E-22 T 11-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 syc1500_d 649f41631766b23db420f152c899d3ef 251 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 76 109 - T 11-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 syc1500_d 649f41631766b23db420f152c899d3ef 251 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 1 208 1.2E-44 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 syc1500_d 649f41631766b23db420f152c899d3ef 251 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 1 15 - T 11-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 syc1500_d 649f41631766b23db420f152c899d3ef 251 Gene3D G3DSA:3.40.1010.10 1 111 2.8E-39 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 syc1500_d 649f41631766b23db420f152c899d3ef 251 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 1 232 4.7E-91 T 11-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 syc1500_d 649f41631766b23db420f152c899d3ef 251 SUPERFAMILY SSF53790 1 232 4.71E-71 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 syc1500_d 649f41631766b23db420f152c899d3ef 251 Gene3D G3DSA:3.30.950.10 112 246 2.3E-43 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 syc1215_c 8ad23513256c3c9f2895c022e12a7234 613 SUPERFAMILY SSF140990 408 606 3.4E-74 T 11-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 syc1215_c 8ad23513256c3c9f2895c022e12a7234 613 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 608 37.702 T 11-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 syc1215_c 8ad23513256c3c9f2895c022e12a7234 613 Gene3D G3DSA:2.40.50.920 32 104 4.7E-7 T 11-10-2018 syc1215_c 8ad23513256c3c9f2895c022e12a7234 613 Gene3D G3DSA:1.20.58.760 403 611 2.2E-76 T 11-10-2018 syc1215_c 8ad23513256c3c9f2895c022e12a7234 613 Pfam PF06480 FtsH Extracellular 10 99 2.4E-6 T 11-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 syc1215_c 8ad23513256c3c9f2895c022e12a7234 613 Gene3D G3DSA:3.40.50.300 146 327 4.7E-69 T 11-10-2018 syc1215_c 8ad23513256c3c9f2895c022e12a7234 613 Pfam PF01434 Peptidase family M41 388 601 2.3E-84 T 11-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 syc1215_c 8ad23513256c3c9f2895c022e12a7234 613 SUPERFAMILY SSF52540 154 421 9.73E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc1215_c 8ad23513256c3c9f2895c022e12a7234 613 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 194 326 2.1E-45 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 syc1215_c 8ad23513256c3c9f2895c022e12a7234 613 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 105 602 2.9E-237 T 11-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 syc1215_c 8ad23513256c3c9f2895c022e12a7234 613 SMART SM00382 190 329 1.0E-25 T 11-10-2018 IPR003593 AAA+ ATPase domain syc1215_c 8ad23513256c3c9f2895c022e12a7234 613 Gene3D G3DSA:1.10.8.60 328 402 5.7E-29 T 11-10-2018 syc1215_c 8ad23513256c3c9f2895c022e12a7234 613 ProSitePatterns PS00674 AAA-protein family signature. 297 315 - T 11-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 syc0143_d af0c0b42a39e3c2a08b3ce9dd8ee7c8f 149 SUPERFAMILY SSF69635 4 147 1.65E-37 T 11-10-2018 syc0143_d af0c0b42a39e3c2a08b3ce9dd8ee7c8f 149 Gene3D G3DSA:3.30.1460.10 21 149 8.1E-41 T 11-10-2018 syc0143_d af0c0b42a39e3c2a08b3ce9dd8ee7c8f 149 Pfam PF10722 Putative bacterial sensory transduction regulator 27 146 4.5E-15 T 11-10-2018 IPR019660 Putative sensory transduction regulator YbjN syc1662_d 4abd209e32708e2bc5f03156a7ded7aa 337 Pfam PF12727 PBP superfamily domain 57 285 5.6E-37 T 11-10-2018 IPR024370 PBP domain syc1662_d 4abd209e32708e2bc5f03156a7ded7aa 337 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 8 301 5.5E-89 T 11-10-2018 IPR011862 Phosphate binding protein GO:0042301 syc1662_d 4abd209e32708e2bc5f03156a7ded7aa 337 Gene3D G3DSA:3.40.190.10 41 300 9.7E-94 T 11-10-2018 syc1662_d 4abd209e32708e2bc5f03156a7ded7aa 337 SUPERFAMILY SSF53850 39 316 1.04E-78 T 11-10-2018 syc1662_d 4abd209e32708e2bc5f03156a7ded7aa 337 Gene3D G3DSA:3.40.190.10 120 263 9.7E-94 T 11-10-2018 syc1874_d deb8c4c607ef5420df2570fcb5ad347e 82 Pfam PF00366 Ribosomal protein S17 8 75 1.4E-31 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc1874_d deb8c4c607ef5420df2570fcb5ad347e 82 ProSitePatterns PS00056 Ribosomal protein S17 signature. 54 66 - T 11-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc1874_d deb8c4c607ef5420df2570fcb5ad347e 82 SUPERFAMILY SSF50249 4 80 1.59E-32 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold syc1874_d deb8c4c607ef5420df2570fcb5ad347e 82 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 3 78 25.023 T 11-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc1874_d deb8c4c607ef5420df2570fcb5ad347e 82 PRINTS PR00973 Ribosomal protein S17 family signature 54 64 1.5E-13 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc1874_d deb8c4c607ef5420df2570fcb5ad347e 82 PRINTS PR00973 Ribosomal protein S17 family signature 22 45 1.5E-13 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc1874_d deb8c4c607ef5420df2570fcb5ad347e 82 PRINTS PR00973 Ribosomal protein S17 family signature 64 71 1.5E-13 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc1874_d deb8c4c607ef5420df2570fcb5ad347e 82 Gene3D G3DSA:2.40.50.140 2 80 1.3E-33 T 11-10-2018 syc1874_d deb8c4c607ef5420df2570fcb5ad347e 82 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 4 73 1.9E-34 T 11-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc1874_d deb8c4c607ef5420df2570fcb5ad347e 82 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 1 73 4.0E-35 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc0758_c ae00294dfd72e32aed2c7169b7ad5d34 849 Pfam PF07697 7TM-HD extracellular 126 227 3.4E-15 T 11-10-2018 IPR011624 Metal-dependent phosphohydrolase, 7TM extracellular domain syc0758_c ae00294dfd72e32aed2c7169b7ad5d34 849 Pfam PF07697 7TM-HD extracellular 236 415 2.1E-32 T 11-10-2018 IPR011624 Metal-dependent phosphohydrolase, 7TM extracellular domain syc0758_c ae00294dfd72e32aed2c7169b7ad5d34 849 TIGRFAM TIGR00277 HDIG: HDIG domain 631 730 5.1E-23 T 11-10-2018 IPR006675 HDIG domain syc0758_c ae00294dfd72e32aed2c7169b7ad5d34 849 Gene3D G3DSA:1.10.3210.10 601 802 9.4E-15 T 11-10-2018 syc0758_c ae00294dfd72e32aed2c7169b7ad5d34 849 SMART SM00471 630 792 1.3E-7 T 11-10-2018 IPR003607 HD/PDEase domain syc0758_c ae00294dfd72e32aed2c7169b7ad5d34 849 Pfam PF01966 HD domain 634 782 2.9E-15 T 11-10-2018 IPR006674 HD domain syc0758_c ae00294dfd72e32aed2c7169b7ad5d34 849 SUPERFAMILY SSF109604 630 787 8.48E-14 T 11-10-2018 syc0758_c ae00294dfd72e32aed2c7169b7ad5d34 849 Pfam PF07698 7TM receptor with intracellular HD hydrolase 420 609 3.0E-35 T 11-10-2018 IPR011621 Metal-dependent phosphohydrolase, 7TM intracellular domain syc0818_d 18d9d3b45de7c000166b610dc81f39e1 425 SMART SM00245 194 384 2.8E-91 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 syc0818_d 18d9d3b45de7c000166b610dc81f39e1 425 Gene3D G3DSA:2.30.42.10 121 208 3.6E-124 T 11-10-2018 syc0818_d 18d9d3b45de7c000166b610dc81f39e1 425 Gene3D G3DSA:3.30.750.44 46 359 3.6E-124 T 11-10-2018 syc0818_d 18d9d3b45de7c000166b610dc81f39e1 425 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 71 396 1.0E-125 T 11-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 syc0818_d 18d9d3b45de7c000166b610dc81f39e1 425 Gene3D G3DSA:3.90.226.10 209 381 3.6E-124 T 11-10-2018 syc0818_d 18d9d3b45de7c000166b610dc81f39e1 425 SUPERFAMILY SSF52096 40 388 1.56E-80 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily syc0818_d 18d9d3b45de7c000166b610dc81f39e1 425 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 116 191 1.4E-12 T 11-10-2018 IPR001478 PDZ domain GO:0005515 syc0818_d 18d9d3b45de7c000166b610dc81f39e1 425 Pfam PF03572 Peptidase family S41 223 382 1.7E-58 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 syc0818_d 18d9d3b45de7c000166b610dc81f39e1 425 SUPERFAMILY SSF50156 92 216 1.86E-23 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 syc0818_d 18d9d3b45de7c000166b610dc81f39e1 425 SMART SM00228 121 194 1.2E-16 T 11-10-2018 IPR001478 PDZ domain GO:0005515 syc1106_d 6aa7c38309b054746e3992331c90686c 266 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 243 1.3E-91 T 11-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 syc1106_d 6aa7c38309b054746e3992331c90686c 266 Gene3D G3DSA:3.20.20.70 1 264 7.2E-106 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 syc1106_d 6aa7c38309b054746e3992331c90686c 266 SUPERFAMILY SSF51366 1 256 2.83E-93 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 syc1106_d 6aa7c38309b054746e3992331c90686c 266 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 11-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 syc1106_d 6aa7c38309b054746e3992331c90686c 266 Pfam PF00290 Tryptophan synthase alpha chain 8 244 1.2E-91 T 11-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 syc1106_d 6aa7c38309b054746e3992331c90686c 266 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 258 36.994 T 11-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 syc1920_d 98b228ff8ceb85c6e291b51559cf00c6 366 Gene3D G3DSA:3.40.190.10 152 364 3.3E-122 T 11-10-2018 syc1920_d 98b228ff8ceb85c6e291b51559cf00c6 366 Pfam PF13343 Bacterial extracellular solute-binding protein 98 323 5.0E-25 T 11-10-2018 syc1920_d 98b228ff8ceb85c6e291b51559cf00c6 366 PIRSF PIRSF002825 21 366 3.3E-81 T 11-10-2018 IPR026045 Ferric binding protein syc1920_d 98b228ff8ceb85c6e291b51559cf00c6 366 SUPERFAMILY SSF53850 49 362 2.04E-75 T 11-10-2018 syc1920_d 98b228ff8ceb85c6e291b51559cf00c6 366 Gene3D G3DSA:3.40.190.10 51 329 3.3E-122 T 11-10-2018 syc1090_d ec13a26d3f713f1f70c4e1e9766e29f6 282 Pfam PF00005 ABC transporter 20 162 1.7E-37 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 syc1090_d ec13a26d3f713f1f70c4e1e9766e29f6 282 Gene3D G3DSA:3.40.50.300 1 234 1.7E-76 T 11-10-2018 syc1090_d ec13a26d3f713f1f70c4e1e9766e29f6 282 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 syc1090_d ec13a26d3f713f1f70c4e1e9766e29f6 282 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 9 195 3.9E-39 T 11-10-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004 syc1090_d ec13a26d3f713f1f70c4e1e9766e29f6 282 SMART SM00382 28 210 1.4E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain syc1090_d ec13a26d3f713f1f70c4e1e9766e29f6 282 SUPERFAMILY SSF52540 6 226 7.99E-70 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc2383_c 51248c60e6831eb214fe93ba82162426 675 Gene3D G3DSA:3.40.390.10 343 498 5.1E-176 T 11-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 syc2383_c 51248c60e6831eb214fe93ba82162426 675 SUPERFAMILY SSF55486 149 671 4.92E-142 T 11-10-2018 syc2383_c 51248c60e6831eb214fe93ba82162426 675 Gene3D G3DSA:1.10.1370.10 151 667 5.1E-176 T 11-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 syc2383_c 51248c60e6831eb214fe93ba82162426 675 Pfam PF01432 Peptidase family M3 210 671 3.0E-136 T 11-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 syc0721_c 54438c431500e12f97ee2954deaea24e 74 ProDom PD010362 PHOSPHORIBOSYLFORMYLGLYCINAMIDINE PURS SYNTHETASE SYNTHASE COMPONENT SYNTHASE LIGASE FGAM UPF0062 I 1 67 9.0E-33 T 11-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 syc0721_c 54438c431500e12f97ee2954deaea24e 74 TIGRFAM TIGR00302 TIGR00302: phosphoribosylformylglycinamidine synthase, purS protein 1 67 6.1E-27 T 11-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 syc0721_c 54438c431500e12f97ee2954deaea24e 74 Pfam PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase 1 66 2.5E-27 T 11-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 syc0721_c 54438c431500e12f97ee2954deaea24e 74 SUPERFAMILY SSF82697 1 65 1.19E-23 T 11-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 syc0721_c 54438c431500e12f97ee2954deaea24e 74 Gene3D G3DSA:3.30.1280.10 1 70 3.1E-26 T 11-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 syc0777_c dee5e83e86b68cd080a09e908c821d63 154 Gene3D G3DSA:1.10.530.40 17 152 2.5E-40 T 11-10-2018 syc0777_c dee5e83e86b68cd080a09e908c821d63 154 SUPERFAMILY SSF53955 18 149 8.7E-35 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily syc1975_d af743bae380168cb312e753bd97964b2 479 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 8 471 7.0E-199 T 11-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 syc1975_d af743bae380168cb312e753bd97964b2 479 Pfam PF01425 Amidase 20 460 1.6E-165 T 11-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 syc1975_d af743bae380168cb312e753bd97964b2 479 ProSitePatterns PS00571 Amidases signature. 148 179 - T 11-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 syc1975_d af743bae380168cb312e753bd97964b2 479 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 7 471 94.015 T 11-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 syc1975_d af743bae380168cb312e753bd97964b2 479 SUPERFAMILY SSF75304 2 478 4.19E-169 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 syc1975_d af743bae380168cb312e753bd97964b2 479 Gene3D G3DSA:3.90.1300.10 1 479 1.5E-197 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 syc1063_c 3ae0beafa9c5f1b0c4b6d83030ece53b 406 Gene3D G3DSA:3.20.20.105 25 400 1.8E-161 T 11-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 syc1063_c 3ae0beafa9c5f1b0c4b6d83030ece53b 406 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 37 396 2.2E-161 T 11-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 syc1063_c 3ae0beafa9c5f1b0c4b6d83030ece53b 406 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 37 397 2.3E-168 T 11-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 syc1063_c 3ae0beafa9c5f1b0c4b6d83030ece53b 406 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 35 399 54.4 T 11-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 syc1063_c 3ae0beafa9c5f1b0c4b6d83030ece53b 406 Pfam PF01702 Queuine tRNA-ribosyltransferase 163 391 2.4E-88 T 11-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 syc1063_c 3ae0beafa9c5f1b0c4b6d83030ece53b 406 SUPERFAMILY SSF51713 34 397 4.19E-154 T 11-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 syc1069_d 2b775137a44ac22616b06e4dd1d1f0ab 443 Hamap MF_00176 Serine--tRNA ligase [serS]. 16 440 41.332 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 syc1069_d 2b775137a44ac22616b06e4dd1d1f0ab 443 PRINTS PR00981 Seryl-tRNA synthetase signature 282 294 4.6E-35 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 syc1069_d 2b775137a44ac22616b06e4dd1d1f0ab 443 PRINTS PR00981 Seryl-tRNA synthetase signature 294 307 4.6E-35 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 syc1069_d 2b775137a44ac22616b06e4dd1d1f0ab 443 PRINTS PR00981 Seryl-tRNA synthetase signature 334 347 4.6E-35 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 syc1069_d 2b775137a44ac22616b06e4dd1d1f0ab 443 PRINTS PR00981 Seryl-tRNA synthetase signature 351 367 4.6E-35 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 syc1069_d 2b775137a44ac22616b06e4dd1d1f0ab 443 PRINTS PR00981 Seryl-tRNA synthetase signature 369 385 4.6E-35 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 syc1069_d 2b775137a44ac22616b06e4dd1d1f0ab 443 SUPERFAMILY SSF46589 17 132 2.35E-25 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 syc1069_d 2b775137a44ac22616b06e4dd1d1f0ab 443 TIGRFAM TIGR00414 serS: serine--tRNA ligase 17 435 9.4E-167 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 syc1069_d 2b775137a44ac22616b06e4dd1d1f0ab 443 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 241 418 8.3E-38 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 syc1069_d 2b775137a44ac22616b06e4dd1d1f0ab 443 Gene3D G3DSA:3.30.930.10 125 442 3.5E-122 T 11-10-2018 syc1069_d 2b775137a44ac22616b06e4dd1d1f0ab 443 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 16 127 5.4E-30 T 11-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 syc1069_d 2b775137a44ac22616b06e4dd1d1f0ab 443 SUPERFAMILY SSF55681 136 438 1.6E-101 T 11-10-2018 syc1069_d 2b775137a44ac22616b06e4dd1d1f0ab 443 Gene3D G3DSA:1.10.287.40 16 124 2.9E-20 T 11-10-2018 syc1069_d 2b775137a44ac22616b06e4dd1d1f0ab 443 PIRSF PIRSF001529 16 442 3.9E-164 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 syc0131_c de3b946d3d050dbd13d657d748c2294c 276 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 33 52 - T 11-10-2018 IPR020808 Bacterial microcompartments protein, conserved site syc0131_c de3b946d3d050dbd13d657d748c2294c 276 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 120 164 6.0E-19 T 11-10-2018 syc0131_c de3b946d3d050dbd13d657d748c2294c 276 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 16 76 2.0E-26 T 11-10-2018 syc0131_c de3b946d3d050dbd13d657d748c2294c 276 SUPERFAMILY SSF143414 119 206 2.22E-27 T 11-10-2018 IPR037233 CcmK-like superfamily syc0131_c de3b946d3d050dbd13d657d748c2294c 276 SUPERFAMILY SSF143414 15 107 1.57E-24 T 11-10-2018 IPR037233 CcmK-like superfamily syc0131_c de3b946d3d050dbd13d657d748c2294c 276 Pfam PF00936 BMC domain 120 195 6.1E-24 T 11-10-2018 IPR000249 Microcompartment protein, bacteria syc0131_c de3b946d3d050dbd13d657d748c2294c 276 Pfam PF00936 BMC domain 16 91 9.3E-22 T 11-10-2018 IPR000249 Microcompartment protein, bacteria syc0131_c de3b946d3d050dbd13d657d748c2294c 276 Gene3D G3DSA:3.30.70.1710 110 217 4.6E-31 T 11-10-2018 syc0131_c de3b946d3d050dbd13d657d748c2294c 276 SMART SM00877 15 91 5.4E-28 T 11-10-2018 IPR000249 Microcompartment protein, bacteria syc0131_c de3b946d3d050dbd13d657d748c2294c 276 SMART SM00877 119 195 4.0E-31 T 11-10-2018 IPR000249 Microcompartment protein, bacteria syc0131_c de3b946d3d050dbd13d657d748c2294c 276 Gene3D G3DSA:3.30.70.1710 4 109 1.4E-26 T 11-10-2018 syc0131_c de3b946d3d050dbd13d657d748c2294c 276 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 137 156 - T 11-10-2018 IPR020808 Bacterial microcompartments protein, conserved site syc1281_d 158fcd9cc4aa607cef98575fcc3b4087 448 PIRSF PIRSF000505 15 448 5.9E-124 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 syc1281_d 158fcd9cc4aa607cef98575fcc3b4087 448 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 28 443 4.7E-132 T 11-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 syc1281_d 158fcd9cc4aa607cef98575fcc3b4087 448 SUPERFAMILY SSF55205 27 446 1.42E-133 T 11-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 syc1281_d 158fcd9cc4aa607cef98575fcc3b4087 448 ProSitePatterns PS00885 EPSP synthase signature 2. 360 378 - T 11-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 syc1281_d 158fcd9cc4aa607cef98575fcc3b4087 448 Gene3D G3DSA:3.65.10.10 30 440 2.3E-150 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 syc1281_d 158fcd9cc4aa607cef98575fcc3b4087 448 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 30 447 5.1E-128 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 syc1281_d 158fcd9cc4aa607cef98575fcc3b4087 448 ProSitePatterns PS00104 EPSP synthase signature 1. 105 119 - T 11-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 syc1281_d 158fcd9cc4aa607cef98575fcc3b4087 448 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 26 448 33.263 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 syc1281_d 158fcd9cc4aa607cef98575fcc3b4087 448 Gene3D G3DSA:3.65.10.10 38 250 2.3E-150 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 syc2248_d 3f445cf0d3e06f259147e0d6c8e41fbb 609 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 24 577 7.1E-197 T 11-10-2018 IPR004613 Ribonuclease J GO:0003723|GO:0046872 syc2248_d 3f445cf0d3e06f259147e0d6c8e41fbb 609 Gene3D G3DSA:3.60.15.10 24 452 5.9E-173 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like syc2248_d 3f445cf0d3e06f259147e0d6c8e41fbb 609 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 380 424 3.9E-7 T 11-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain syc2248_d 3f445cf0d3e06f259147e0d6c8e41fbb 609 SUPERFAMILY SSF56281 23 441 8.76E-85 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like syc2248_d 3f445cf0d3e06f259147e0d6c8e41fbb 609 Hamap MF_01491 Ribonuclease J [rnj]. 18 580 42.812 T 11-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 syc2248_d 3f445cf0d3e06f259147e0d6c8e41fbb 609 Gene3D G3DSA:3.10.20.580 467 580 2.7E-8 T 11-10-2018 syc2248_d 3f445cf0d3e06f259147e0d6c8e41fbb 609 PIRSF PIRSF004803 14 580 3.4E-229 T 11-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 syc2248_d 3f445cf0d3e06f259147e0d6c8e41fbb 609 Gene3D G3DSA:3.40.50.10710 224 382 5.9E-173 T 11-10-2018 syc2248_d 3f445cf0d3e06f259147e0d6c8e41fbb 609 SMART SM00849 35 232 9.1E-20 T 11-10-2018 IPR001279 Metallo-beta-lactamase syc2248_d 3f445cf0d3e06f259147e0d6c8e41fbb 609 ProSitePatterns PS01292 Uncharacterized protein family UPF0036 signature. 381 409 - T 11-10-2018 IPR001587 Ribonuclease J, conserved site syc2248_d 3f445cf0d3e06f259147e0d6c8e41fbb 609 Pfam PF00753 Metallo-beta-lactamase superfamily 37 187 5.1E-10 T 11-10-2018 IPR001279 Metallo-beta-lactamase syc1867_d 1d0a6358a15f50d6f2a9f51f8658c989 100 Gene3D G3DSA:3.30.70.330 8 99 2.9E-29 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily syc1867_d 1d0a6358a15f50d6f2a9f51f8658c989 100 Pfam PF00276 Ribosomal protein L23 11 95 1.3E-27 T 11-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 syc1867_d 1d0a6358a15f50d6f2a9f51f8658c989 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 10 99 22.064 T 11-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 syc1867_d 1d0a6358a15f50d6f2a9f51f8658c989 100 SUPERFAMILY SSF54189 10 99 2.66E-29 T 11-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc1245_d e33a13e9f55cbfff8cfd68bcc7dd0fa4 160 SUPERFAMILY SSF55785 63 153 5.52E-5 T 11-10-2018 IPR035965 PAS domain superfamily syc1245_d e33a13e9f55cbfff8cfd68bcc7dd0fa4 160 Pfam PF08670 MEKHLA domain 17 158 5.6E-54 T 11-10-2018 IPR013978 MEKHLA syc1709_d bfde9c437fb73149f57f906e98e070ef 183 Gene3D G3DSA:3.40.50.1000 18 148 2.3E-16 T 11-10-2018 IPR023214 HAD superfamily syc1709_d bfde9c437fb73149f57f906e98e070ef 183 TIGRFAM TIGR01668 YqeG_hyp_ppase: HAD phosphatase, family IIIA 6 171 1.8E-49 T 11-10-2018 IPR010021 HAD-superfamily phosphatase, YqeG-like syc1709_d bfde9c437fb73149f57f906e98e070ef 183 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 32 141 3.8E-14 T 11-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 syc1709_d bfde9c437fb73149f57f906e98e070ef 183 Pfam PF13242 HAD-hyrolase-like 93 139 3.0E-9 T 11-10-2018 syc1709_d bfde9c437fb73149f57f906e98e070ef 183 SUPERFAMILY SSF56784 20 145 4.64E-20 T 11-10-2018 IPR036412 HAD-like superfamily syc2332_c 1e33dad8fd109c2c239ab70a7c641a87 363 Gene3D G3DSA:3.40.50.720 3 350 5.7E-133 T 11-10-2018 syc2332_c 1e33dad8fd109c2c239ab70a7c641a87 363 PIRSF PIRSF000183 1 360 6.0E-153 T 11-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 syc2332_c 1e33dad8fd109c2c239ab70a7c641a87 363 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 140 350 1.2E-81 T 11-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain syc2332_c 1e33dad8fd109c2c239ab70a7c641a87 363 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 172 197 - T 11-10-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 syc2332_c 1e33dad8fd109c2c239ab70a7c641a87 363 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 136 3.7E-42 T 11-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal syc2332_c 1e33dad8fd109c2c239ab70a7c641a87 363 SUPERFAMILY SSF51735 136 302 1.61E-49 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily syc2332_c 1e33dad8fd109c2c239ab70a7c641a87 363 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 359 8.8E-169 T 11-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 syc2332_c 1e33dad8fd109c2c239ab70a7c641a87 363 Gene3D G3DSA:3.40.50.720 129 304 5.7E-133 T 11-10-2018 syc2332_c 1e33dad8fd109c2c239ab70a7c641a87 363 SMART SM01003 4 136 1.2E-71 T 11-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal syc2332_c 1e33dad8fd109c2c239ab70a7c641a87 363 SMART SM01002 148 296 2.8E-81 T 11-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain syc2332_c 1e33dad8fd109c2c239ab70a7c641a87 363 SUPERFAMILY SSF52283 1 357 1.53E-61 T 11-10-2018 syc0959_d b617b4f3e59a111942ae7bf061b06c31 666 Pfam PF02151 UvrB/uvrC motif 627 660 2.3E-12 T 11-10-2018 IPR001943 UVR domain GO:0005515 syc0959_d b617b4f3e59a111942ae7bf061b06c31 666 SMART SM00487 8 424 7.1E-26 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain syc0959_d b617b4f3e59a111942ae7bf061b06c31 666 SMART SM00490 458 544 3.9E-21 T 11-10-2018 IPR001650 Helicase, C-terminal syc0959_d b617b4f3e59a111942ae7bf061b06c31 666 Hamap MF_00204 UvrABC system protein B [uvrB]. 2 661 44.084 T 11-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 syc0959_d b617b4f3e59a111942ae7bf061b06c31 666 Gene3D G3DSA:4.10.860.10 607 664 1.4E-12 T 11-10-2018 syc0959_d b617b4f3e59a111942ae7bf061b06c31 666 SUPERFAMILY SSF52540 2 413 1.27E-135 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0959_d b617b4f3e59a111942ae7bf061b06c31 666 Pfam PF12344 Ultra-violet resistance protein B 550 590 4.6E-21 T 11-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain syc0959_d b617b4f3e59a111942ae7bf061b06c31 666 Pfam PF00271 Helicase conserved C-terminal domain 432 542 1.1E-19 T 11-10-2018 IPR001650 Helicase, C-terminal syc0959_d b617b4f3e59a111942ae7bf061b06c31 666 Gene3D G3DSA:3.40.50.300 1 238 3.0E-76 T 11-10-2018 syc0959_d b617b4f3e59a111942ae7bf061b06c31 666 Gene3D G3DSA:3.40.50.300 274 412 2.4E-55 T 11-10-2018 syc0959_d b617b4f3e59a111942ae7bf061b06c31 666 SUPERFAMILY SSF52540 36 571 2.61E-36 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0959_d b617b4f3e59a111942ae7bf061b06c31 666 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 4 659 0.0 T 11-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 syc0959_d b617b4f3e59a111942ae7bf061b06c31 666 Gene3D G3DSA:3.40.50.300 413 594 2.0E-52 T 11-10-2018 syc0959_d b617b4f3e59a111942ae7bf061b06c31 666 SUPERFAMILY SSF46600 615 663 6.8E-13 T 11-10-2018 IPR036876 UVR domain superfamily syc0959_d b617b4f3e59a111942ae7bf061b06c31 666 Pfam PF04851 Type III restriction enzyme, res subunit 14 118 1.1E-8 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 syc2165_c bb351dea10bbaaccd6f09911eeab24b3 386 Gene3D G3DSA:3.90.1150.10 4 367 2.8E-125 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 syc2165_c bb351dea10bbaaccd6f09911eeab24b3 386 PIRSF PIRSF005572 1 380 1.6E-113 T 11-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 syc2165_c bb351dea10bbaaccd6f09911eeab24b3 386 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 191 210 - T 11-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site syc2165_c bb351dea10bbaaccd6f09911eeab24b3 386 Pfam PF00266 Aminotransferase class-V 4 365 5.6E-68 T 11-10-2018 IPR000192 Aminotransferase class V domain syc2165_c bb351dea10bbaaccd6f09911eeab24b3 386 Gene3D G3DSA:3.40.640.10 14 254 2.8E-125 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 syc2165_c bb351dea10bbaaccd6f09911eeab24b3 386 SUPERFAMILY SSF53383 3 374 3.86E-92 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase syc0116_d 16d7e650e411f6ffb8f0406ade444985 306 SUPERFAMILY SSF55060 164 280 8.87E-34 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily syc0116_d 16d7e650e411f6ffb8f0406ade444985 306 Hamap MF_00384 Homoserine kinase [thrB]. 5 301 30.382 T 11-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 syc0116_d 16d7e650e411f6ffb8f0406ade444985 306 PIRSF PIRSF000676 1 303 3.0E-95 T 11-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 syc0116_d 16d7e650e411f6ffb8f0406ade444985 306 PRINTS PR00958 Homoserine kinase signature 247 262 1.6E-40 T 11-10-2018 syc0116_d 16d7e650e411f6ffb8f0406ade444985 306 PRINTS PR00958 Homoserine kinase signature 94 109 1.6E-40 T 11-10-2018 syc0116_d 16d7e650e411f6ffb8f0406ade444985 306 PRINTS PR00958 Homoserine kinase signature 168 185 1.6E-40 T 11-10-2018 syc0116_d 16d7e650e411f6ffb8f0406ade444985 306 PRINTS PR00958 Homoserine kinase signature 10 25 1.6E-40 T 11-10-2018 syc0116_d 16d7e650e411f6ffb8f0406ade444985 306 PRINTS PR00958 Homoserine kinase signature 128 141 1.6E-40 T 11-10-2018 syc0116_d 16d7e650e411f6ffb8f0406ade444985 306 Gene3D G3DSA:3.30.230.10 5 160 7.6E-94 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup syc0116_d 16d7e650e411f6ffb8f0406ade444985 306 SUPERFAMILY SSF54211 1 146 9.87E-29 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold syc0116_d 16d7e650e411f6ffb8f0406ade444985 306 Gene3D G3DSA:3.30.70.890 161 266 7.6E-94 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily syc0116_d 16d7e650e411f6ffb8f0406ade444985 306 Pfam PF08544 GHMP kinases C terminal 206 275 5.0E-9 T 11-10-2018 IPR013750 GHMP kinase, C-terminal domain syc0116_d 16d7e650e411f6ffb8f0406ade444985 306 Pfam PF00288 GHMP kinases N terminal domain 81 141 3.8E-10 T 11-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 syc0116_d 16d7e650e411f6ffb8f0406ade444985 306 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 87 98 - T 11-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 syc0116_d 16d7e650e411f6ffb8f0406ade444985 306 TIGRFAM TIGR00191 thrB: homoserine kinase 3 302 8.6E-92 T 11-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 syc0754_d a981b0d94820c01c6c1471c56e89d399 218 Gene3D G3DSA:3.40.190.10 93 179 1.1E-64 T 11-10-2018 syc0754_d a981b0d94820c01c6c1471c56e89d399 218 Pfam PF01634 ATP phosphoribosyltransferase 52 207 7.8E-49 T 11-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 syc0754_d a981b0d94820c01c6c1471c56e89d399 218 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 2 187 1.2E-62 T 11-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 syc0754_d a981b0d94820c01c6c1471c56e89d399 218 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 1 211 56.146 T 11-10-2018 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 syc0754_d a981b0d94820c01c6c1471c56e89d399 218 Gene3D G3DSA:3.40.190.10 3 201 1.1E-64 T 11-10-2018 syc0754_d a981b0d94820c01c6c1471c56e89d399 218 SUPERFAMILY SSF53850 1 213 4.48E-64 T 11-10-2018 syc0754_d a981b0d94820c01c6c1471c56e89d399 218 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 146 167 - T 11-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 syc0392_d 19bb80b0bb52dfd6c54af3ea9d364190 1059 SUPERFAMILY SSF55785 491 618 2.09E-31 T 11-10-2018 IPR035965 PAS domain superfamily syc0392_d 19bb80b0bb52dfd6c54af3ea9d364190 1059 Pfam PF00989 PAS fold 73 183 1.7E-8 T 11-10-2018 IPR013767 PAS fold GO:0006355 syc0392_d 19bb80b0bb52dfd6c54af3ea9d364190 1059 SUPERFAMILY SSF55785 361 492 8.05E-20 T 11-10-2018 IPR035965 PAS domain superfamily syc0392_d 19bb80b0bb52dfd6c54af3ea9d364190 1059 SUPERFAMILY SSF55785 77 185 1.57E-15 T 11-10-2018 IPR035965 PAS domain superfamily syc0392_d 19bb80b0bb52dfd6c54af3ea9d364190 1059 Gene3D G3DSA:3.30.450.40 184 361 1.6E-26 T 11-10-2018 IPR029016 GAF-like domain superfamily syc0392_d 19bb80b0bb52dfd6c54af3ea9d364190 1059 Gene3D G3DSA:3.30.450.20 71 183 1.6E-14 T 11-10-2018 syc0392_d 19bb80b0bb52dfd6c54af3ea9d364190 1059 SUPERFAMILY SSF55781 189 357 2.84E-23 T 11-10-2018 syc0392_d 19bb80b0bb52dfd6c54af3ea9d364190 1059 Pfam PF00990 Diguanylate cyclase, GGDEF domain 631 788 1.1E-48 T 11-10-2018 IPR000160 GGDEF domain syc0392_d 19bb80b0bb52dfd6c54af3ea9d364190 1059 SMART SM00052 803 1051 3.3E-115 T 11-10-2018 IPR001633 EAL domain syc0392_d 19bb80b0bb52dfd6c54af3ea9d364190 1059 SMART SM00086 144 186 0.081 T 11-10-2018 IPR001610 PAC motif syc0392_d 19bb80b0bb52dfd6c54af3ea9d364190 1059 SMART SM00086 453 494 3.1E-6 T 11-10-2018 IPR001610 PAC motif syc0392_d 19bb80b0bb52dfd6c54af3ea9d364190 1059 SMART SM00086 578 620 1.1E-6 T 11-10-2018 IPR001610 PAC motif syc0392_d 19bb80b0bb52dfd6c54af3ea9d364190 1059 SUPERFAMILY SSF141868 808 1057 2.48E-89 T 11-10-2018 IPR035919 EAL domain superfamily syc0392_d 19bb80b0bb52dfd6c54af3ea9d364190 1059 Pfam PF01590 GAF domain 208 347 3.9E-9 T 11-10-2018 IPR003018 GAF domain GO:0005515 syc0392_d 19bb80b0bb52dfd6c54af3ea9d364190 1059 SUPERFAMILY SSF55073 636 795 9.42E-47 T 11-10-2018 IPR029787 Nucleotide cyclase syc0392_d 19bb80b0bb52dfd6c54af3ea9d364190 1059 Pfam PF00563 EAL domain 809 1046 8.1E-77 T 11-10-2018 IPR001633 EAL domain syc0392_d 19bb80b0bb52dfd6c54af3ea9d364190 1059 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 627 793 2.5E-43 T 11-10-2018 IPR000160 GGDEF domain syc0392_d 19bb80b0bb52dfd6c54af3ea9d364190 1059 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 503 627 3.0E-22 T 11-10-2018 IPR000014 PAS domain syc0392_d 19bb80b0bb52dfd6c54af3ea9d364190 1059 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 371 501 5.5E-13 T 11-10-2018 IPR000014 PAS domain syc0392_d 19bb80b0bb52dfd6c54af3ea9d364190 1059 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 73 188 4.3E-9 T 11-10-2018 IPR000014 PAS domain syc0392_d 19bb80b0bb52dfd6c54af3ea9d364190 1059 Gene3D G3DSA:3.30.450.20 492 618 1.5E-28 T 11-10-2018 syc0392_d 19bb80b0bb52dfd6c54af3ea9d364190 1059 Gene3D G3DSA:3.30.70.270 625 806 1.3E-59 T 11-10-2018 syc0392_d 19bb80b0bb52dfd6c54af3ea9d364190 1059 SMART SM00091 72 138 7.4E-7 T 11-10-2018 IPR000014 PAS domain syc0392_d 19bb80b0bb52dfd6c54af3ea9d364190 1059 SMART SM00091 375 447 0.023 T 11-10-2018 IPR000014 PAS domain syc0392_d 19bb80b0bb52dfd6c54af3ea9d364190 1059 SMART SM00091 506 572 1.4E-14 T 11-10-2018 IPR000014 PAS domain syc0392_d 19bb80b0bb52dfd6c54af3ea9d364190 1059 Pfam PF08447 PAS fold 402 482 1.9E-16 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 syc0392_d 19bb80b0bb52dfd6c54af3ea9d364190 1059 Pfam PF08447 PAS fold 529 613 7.0E-16 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 syc0392_d 19bb80b0bb52dfd6c54af3ea9d364190 1059 SMART SM00267 620 793 6.9E-62 T 11-10-2018 IPR000160 GGDEF domain syc0392_d 19bb80b0bb52dfd6c54af3ea9d364190 1059 SMART SM00065 208 357 3.4E-13 T 11-10-2018 IPR003018 GAF domain GO:0005515 syc0392_d 19bb80b0bb52dfd6c54af3ea9d364190 1059 Gene3D G3DSA:3.20.20.450 807 1059 2.3E-102 T 11-10-2018 IPR035919 EAL domain superfamily syc0392_d 19bb80b0bb52dfd6c54af3ea9d364190 1059 Gene3D G3DSA:3.30.450.20 373 491 3.6E-24 T 11-10-2018 syc1726_c d2eb667ee3860acda049c4df2c296dd5 263 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 6 259 3.3E-106 T 11-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 syc1726_c d2eb667ee3860acda049c4df2c296dd5 263 Pfam PF08543 Phosphomethylpyrimidine kinase 13 256 4.7E-86 T 11-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 syc1726_c d2eb667ee3860acda049c4df2c296dd5 263 Gene3D G3DSA:3.40.1190.20 1 262 4.4E-92 T 11-10-2018 IPR029056 Ribokinase-like syc1726_c d2eb667ee3860acda049c4df2c296dd5 263 SUPERFAMILY SSF53613 4 262 1.39E-74 T 11-10-2018 IPR029056 Ribokinase-like syc0027_c 60f70b3d42a0027cef95aef19fb20eac 747 SUPERFAMILY SSF81653 236 332 2.48E-28 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 syc0027_c 60f70b3d42a0027cef95aef19fb20eac 747 Pfam PF00403 Heavy-metal-associated domain 6 67 2.9E-15 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 syc0027_c 60f70b3d42a0027cef95aef19fb20eac 747 Pfam PF00122 E1-E2 ATPase 233 410 1.2E-57 T 11-10-2018 syc0027_c 60f70b3d42a0027cef95aef19fb20eac 747 Gene3D G3DSA:3.40.50.1000 413 684 7.6E-96 T 11-10-2018 IPR023214 HAD superfamily syc0027_c 60f70b3d42a0027cef95aef19fb20eac 747 Gene3D G3DSA:2.70.150.20 225 337 1.6E-42 T 11-10-2018 syc0027_c 60f70b3d42a0027cef95aef19fb20eac 747 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 530 710 6.9E-48 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 syc0027_c 60f70b3d42a0027cef95aef19fb20eac 747 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 204 456 5.3E-44 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 syc0027_c 60f70b3d42a0027cef95aef19fb20eac 747 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 144 742 7.0E-205 T 11-10-2018 syc0027_c 60f70b3d42a0027cef95aef19fb20eac 747 PRINTS PR00943 Copper-transporting ATPase signature 666 680 3.5E-15 T 11-10-2018 syc0027_c 60f70b3d42a0027cef95aef19fb20eac 747 PRINTS PR00943 Copper-transporting ATPase signature 415 430 3.5E-15 T 11-10-2018 syc0027_c 60f70b3d42a0027cef95aef19fb20eac 747 PRINTS PR00943 Copper-transporting ATPase signature 609 626 3.5E-15 T 11-10-2018 syc0027_c 60f70b3d42a0027cef95aef19fb20eac 747 PRINTS PR00943 Copper-transporting ATPase signature 202 221 3.5E-15 T 11-10-2018 syc0027_c 60f70b3d42a0027cef95aef19fb20eac 747 PRINTS PR00943 Copper-transporting ATPase signature 148 167 3.5E-15 T 11-10-2018 syc0027_c 60f70b3d42a0027cef95aef19fb20eac 747 PRINTS PR00943 Copper-transporting ATPase signature 355 369 3.5E-15 T 11-10-2018 syc0027_c 60f70b3d42a0027cef95aef19fb20eac 747 ProSitePatterns PS01047 Heavy-metal-associated domain. 9 38 - T 11-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 syc0027_c 60f70b3d42a0027cef95aef19fb20eac 747 SUPERFAMILY SSF55008 2 74 1.57E-18 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 syc0027_c 60f70b3d42a0027cef95aef19fb20eac 747 Gene3D G3DSA:3.30.70.100 2 78 3.4E-19 T 11-10-2018 syc0027_c 60f70b3d42a0027cef95aef19fb20eac 747 Pfam PF00702 haloacid dehalogenase-like hydrolase 428 646 1.0E-46 T 11-10-2018 syc0027_c 60f70b3d42a0027cef95aef19fb20eac 747 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 163 741 5.6E-211 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 syc0027_c 60f70b3d42a0027cef95aef19fb20eac 747 SUPERFAMILY SSF56784 430 739 1.76E-58 T 11-10-2018 IPR036412 HAD-like superfamily syc0027_c 60f70b3d42a0027cef95aef19fb20eac 747 Gene3D G3DSA:3.40.1110.10 443 564 7.6E-96 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 syc0027_c 60f70b3d42a0027cef95aef19fb20eac 747 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 282 296 3.2E-27 T 11-10-2018 syc0027_c 60f70b3d42a0027cef95aef19fb20eac 747 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 632 651 3.2E-27 T 11-10-2018 syc0027_c 60f70b3d42a0027cef95aef19fb20eac 747 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 579 589 3.2E-27 T 11-10-2018 syc0027_c 60f70b3d42a0027cef95aef19fb20eac 747 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 655 667 3.2E-27 T 11-10-2018 syc0027_c 60f70b3d42a0027cef95aef19fb20eac 747 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 432 446 3.2E-27 T 11-10-2018 syc0027_c 60f70b3d42a0027cef95aef19fb20eac 747 SUPERFAMILY SSF81665 180 719 5.75E-16 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 syc0027_c 60f70b3d42a0027cef95aef19fb20eac 747 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 434 440 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 syc0516_c 887984be0aa104d53ab26c5b394c2839 373 Pfam PF00155 Aminotransferase class I and II 29 360 4.7E-41 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 syc0516_c 887984be0aa104d53ab26c5b394c2839 373 SUPERFAMILY SSF53383 29 361 3.59E-61 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase syc0516_c 887984be0aa104d53ab26c5b394c2839 373 Gene3D G3DSA:3.90.1150.10 29 358 1.2E-93 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 syc0516_c 887984be0aa104d53ab26c5b394c2839 373 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 4 365 51.247 T 11-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 syc0516_c 887984be0aa104d53ab26c5b394c2839 373 Gene3D G3DSA:3.40.640.10 49 277 1.2E-93 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 syc2410_d dabceead3ff2920b5f4dc272eca80ffb 344 Pfam PF03459 TOBE domain 278 336 7.4E-15 T 11-10-2018 IPR005116 Transport-associated OB, type 1 syc2410_d dabceead3ff2920b5f4dc272eca80ffb 344 SUPERFAMILY SSF52540 9 245 1.26E-88 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc2410_d dabceead3ff2920b5f4dc272eca80ffb 344 SUPERFAMILY SSF50331 263 335 1.0E-10 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal syc2410_d dabceead3ff2920b5f4dc272eca80ffb 344 Pfam PF00005 ABC transporter 24 166 5.5E-38 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 syc2410_d dabceead3ff2920b5f4dc272eca80ffb 344 SMART SM00382 33 216 2.7E-19 T 11-10-2018 IPR003593 AAA+ ATPase domain syc2410_d dabceead3ff2920b5f4dc272eca80ffb 344 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 9 245 3.1E-137 T 11-10-2018 IPR005666 Sulphate transport system permease protein 1 GO:0008272|GO:0015419|GO:0016020|GO:0043190 KEGG: 00920+3.6.3.25 syc2410_d dabceead3ff2920b5f4dc272eca80ffb 344 Gene3D G3DSA:3.40.50.300 2 242 1.9E-83 T 11-10-2018 syc2410_d dabceead3ff2920b5f4dc272eca80ffb 344 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 syc0897_c 733a56de24c39b66089d514483e57f20 254 SUPERFAMILY SSF56784 4 215 1.23E-14 T 11-10-2018 IPR036412 HAD-like superfamily syc0897_c 733a56de24c39b66089d514483e57f20 254 Gene3D G3DSA:3.40.50.1000 121 223 1.5E-5 T 11-10-2018 IPR023214 HAD superfamily syc0897_c 733a56de24c39b66089d514483e57f20 254 Gene3D G3DSA:1.10.150.240 64 120 1.5E-5 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 syc0731_c 08dd597234f5d2fcfb0a289e83b10c92 279 Pfam PF11103 Protein of unknown function (DUF2887) 3 196 6.4E-56 T 11-10-2018 IPR022573 Protein of unknown function DUF2887 syc0731_c 08dd597234f5d2fcfb0a289e83b10c92 279 Pfam PF14261 Domain of unknown function (DUF4351) 219 276 1.3E-19 T 11-10-2018 IPR025587 Domain of unknown function DUF4351 syc0731_c 08dd597234f5d2fcfb0a289e83b10c92 279 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 30 257 7.0E-15 T 11-10-2018 IPR010106 Recombination-promoting nuclease RpnA syc2096_d 5aeaded5990bf4dfb1bf3a4191de087f 740 Gene3D G3DSA:2.60.200.20 34 136 1.5E-21 T 11-10-2018 syc2096_d 5aeaded5990bf4dfb1bf3a4191de087f 740 Pfam PF00912 Transglycosylase 193 371 4.0E-53 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 syc2096_d 5aeaded5990bf4dfb1bf3a4191de087f 740 SUPERFAMILY SSF53955 185 396 4.22E-62 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily syc2096_d 5aeaded5990bf4dfb1bf3a4191de087f 740 SUPERFAMILY SSF56601 352 739 1.48E-102 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like syc2096_d 5aeaded5990bf4dfb1bf3a4191de087f 740 Gene3D G3DSA:3.40.710.10 394 740 7.2E-103 T 11-10-2018 syc2096_d 5aeaded5990bf4dfb1bf3a4191de087f 740 SMART SM00240 59 112 3.4E-7 T 11-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 syc2096_d 5aeaded5990bf4dfb1bf3a4191de087f 740 Pfam PF00905 Penicillin binding protein transpeptidase domain 460 727 7.7E-40 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 syc2096_d 5aeaded5990bf4dfb1bf3a4191de087f 740 Pfam PF00498 FHA domain 60 126 2.5E-13 T 11-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 syc2096_d 5aeaded5990bf4dfb1bf3a4191de087f 740 SUPERFAMILY SSF49879 35 152 1.26E-24 T 11-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 syc2096_d 5aeaded5990bf4dfb1bf3a4191de087f 740 Gene3D G3DSA:1.10.3810.10 197 393 1.9E-60 T 11-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 syc1458_c dede3a987a0994877c779846ab60eacd 466 Pfam PF03600 Citrate transporter 51 395 2.9E-34 T 11-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 syc0546_c 1b6966013bcf834dc92eaba2a53ee010 632 Gene3D G3DSA:1.20.58.760 417 625 2.2E-64 T 11-10-2018 syc0546_c 1b6966013bcf834dc92eaba2a53ee010 632 SUPERFAMILY SSF52540 164 408 4.83E-74 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0546_c 1b6966013bcf834dc92eaba2a53ee010 632 Gene3D G3DSA:1.10.8.60 338 414 2.7E-26 T 11-10-2018 syc0546_c 1b6966013bcf834dc92eaba2a53ee010 632 SMART SM00382 200 339 1.1E-24 T 11-10-2018 IPR003593 AAA+ ATPase domain syc0546_c 1b6966013bcf834dc92eaba2a53ee010 632 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 15 619 35.379 T 11-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 syc0546_c 1b6966013bcf834dc92eaba2a53ee010 632 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 119 612 1.8E-212 T 11-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 syc0546_c 1b6966013bcf834dc92eaba2a53ee010 632 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 204 336 8.6E-47 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 syc0546_c 1b6966013bcf834dc92eaba2a53ee010 632 ProSitePatterns PS00674 AAA-protein family signature. 307 325 - T 11-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 syc0546_c 1b6966013bcf834dc92eaba2a53ee010 632 Pfam PF01434 Peptidase family M41 399 611 7.0E-63 T 11-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 syc0546_c 1b6966013bcf834dc92eaba2a53ee010 632 SUPERFAMILY SSF140990 418 616 1.7E-61 T 11-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 syc0546_c 1b6966013bcf834dc92eaba2a53ee010 632 Gene3D G3DSA:3.40.50.300 157 337 1.5E-70 T 11-10-2018 syc0211_c d3c088bd037ec1a306f8a53eae9d1861 363 Pfam PF16363 GDP-mannose 4,6 dehydratase 7 337 1.2E-162 T 11-10-2018 IPR016040 NAD(P)-binding domain syc0211_c d3c088bd037ec1a306f8a53eae9d1861 363 Gene3D G3DSA:3.90.25.10 194 342 1.4E-170 T 11-10-2018 syc0211_c d3c088bd037ec1a306f8a53eae9d1861 363 Gene3D G3DSA:3.40.50.720 6 328 1.4E-170 T 11-10-2018 syc0211_c d3c088bd037ec1a306f8a53eae9d1861 363 SUPERFAMILY SSF51735 4 342 1.44E-84 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily syc0211_c d3c088bd037ec1a306f8a53eae9d1861 363 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 4 344 1.7E-183 T 11-10-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 syc0211_c d3c088bd037ec1a306f8a53eae9d1861 363 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 4 347 57.121 T 11-10-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 syc1460_c 48f1022e914c2a1b9998036941073338 471 SUPERFAMILY SSF48179 177 470 2.04E-122 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 syc1460_c 48f1022e914c2a1b9998036941073338 471 SUPERFAMILY SSF51735 5 176 2.59E-53 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily syc1460_c 48f1022e914c2a1b9998036941073338 471 Gene3D G3DSA:1.20.5.320 439 471 6.7E-17 T 11-10-2018 syc1460_c 48f1022e914c2a1b9998036941073338 471 Gene3D G3DSA:1.10.1040.10 181 438 2.0E-105 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 syc1460_c 48f1022e914c2a1b9998036941073338 471 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 256 268 - T 11-10-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 syc1460_c 48f1022e914c2a1b9998036941073338 471 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 179 470 1.5E-127 T 11-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 syc1460_c 48f1022e914c2a1b9998036941073338 471 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 5 470 8.3E-215 T 11-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 syc1460_c 48f1022e914c2a1b9998036941073338 471 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 168 196 1.0E-82 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 syc1460_c 48f1022e914c2a1b9998036941073338 471 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 252 279 1.0E-82 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 syc1460_c 48f1022e914c2a1b9998036941073338 471 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 4 27 1.0E-82 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 syc1460_c 48f1022e914c2a1b9998036941073338 471 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 360 382 1.0E-82 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 syc1460_c 48f1022e914c2a1b9998036941073338 471 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 67 96 1.0E-82 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 syc1460_c 48f1022e914c2a1b9998036941073338 471 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 120 145 1.0E-82 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 syc1460_c 48f1022e914c2a1b9998036941073338 471 SMART SM01350 179 471 6.5E-208 T 11-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 syc1460_c 48f1022e914c2a1b9998036941073338 471 PIRSF PIRSF000109 1 471 5.1E-230 T 11-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 syc1460_c 48f1022e914c2a1b9998036941073338 471 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 174 3.4E-51 T 11-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 syc1460_c 48f1022e914c2a1b9998036941073338 471 Gene3D G3DSA:3.40.50.720 2 180 1.4E-55 T 11-10-2018 syc2313_c 90fc0090acd0a0855a6cdf31eb929d6f 541 Gene3D G3DSA:2.30.42.20 365 528 1.4E-36 T 11-10-2018 syc2313_c 90fc0090acd0a0855a6cdf31eb929d6f 541 SMART SM00853 364 486 2.2E-24 T 11-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 syc2313_c 90fc0090acd0a0855a6cdf31eb929d6f 541 Gene3D G3DSA:3.30.565.10 6 213 5.4E-43 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily syc2313_c 90fc0090acd0a0855a6cdf31eb929d6f 541 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 126 4.3E-6 T 11-10-2018 syc2313_c 90fc0090acd0a0855a6cdf31eb929d6f 541 Gene3D G3DSA:3.30.1370.100 405 483 1.4E-36 T 11-10-2018 syc2313_c 90fc0090acd0a0855a6cdf31eb929d6f 541 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 234 329 4.1E-19 T 11-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 syc2313_c 90fc0090acd0a0855a6cdf31eb929d6f 541 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 94 100 - T 11-10-2018 IPR014762 DNA mismatch repair, conserved site syc2313_c 90fc0090acd0a0855a6cdf31eb929d6f 541 SUPERFAMILY SSF54211 234 329 5.31E-21 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold syc2313_c 90fc0090acd0a0855a6cdf31eb929d6f 541 SUPERFAMILY SSF55874 5 215 3.13E-35 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily syc2313_c 90fc0090acd0a0855a6cdf31eb929d6f 541 SMART SM01340 210 330 2.7E-24 T 11-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 syc2313_c 90fc0090acd0a0855a6cdf31eb929d6f 541 SUPERFAMILY SSF118116 360 528 1.44E-30 T 11-10-2018 IPR037198 MutL, C-terminal domain superfamily syc2313_c 90fc0090acd0a0855a6cdf31eb929d6f 541 Gene3D G3DSA:3.30.230.10 227 335 2.5E-12 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup syc2313_c 90fc0090acd0a0855a6cdf31eb929d6f 541 Pfam PF08676 MutL C terminal dimerisation domain 361 484 2.9E-18 T 11-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 syc1978_c 970fb36262e6c6279a67271feadba0cb 399 PRINTS PR00344 Bacterial sensor protein C-terminal signature 321 335 2.3E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 syc1978_c 970fb36262e6c6279a67271feadba0cb 399 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 372 2.3E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 syc1978_c 970fb36262e6c6279a67271feadba0cb 399 PRINTS PR00344 Bacterial sensor protein C-terminal signature 378 391 2.3E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 syc1978_c 970fb36262e6c6279a67271feadba0cb 399 Pfam PF00512 His Kinase A (phospho-acceptor) domain 164 234 8.7E-8 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 syc1978_c 970fb36262e6c6279a67271feadba0cb 399 SMART SM00387 283 394 6.2E-38 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase syc1978_c 970fb36262e6c6279a67271feadba0cb 399 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 284 392 4.5E-28 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase syc1978_c 970fb36262e6c6279a67271feadba0cb 399 SMART SM00388 163 237 8.9E-7 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 syc1978_c 970fb36262e6c6279a67271feadba0cb 399 Gene3D G3DSA:1.10.287.130 154 235 1.9E-7 T 11-10-2018 syc1978_c 970fb36262e6c6279a67271feadba0cb 399 Hamap MF_01837 Adaptive-response sensory-kinase SasA [sasA]. 20 394 44.706 T 11-10-2018 IPR023527 Adaptive-response sensory-kinase SasA GO:0016772 syc1978_c 970fb36262e6c6279a67271feadba0cb 399 SUPERFAMILY SSF55874 227 394 1.02E-43 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily syc1978_c 970fb36262e6c6279a67271feadba0cb 399 SUPERFAMILY SSF47384 149 235 6.08E-9 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 syc1978_c 970fb36262e6c6279a67271feadba0cb 399 SUPERFAMILY SSF52833 17 114 1.42E-21 T 11-10-2018 IPR036249 Thioredoxin-like superfamily syc1978_c 970fb36262e6c6279a67271feadba0cb 399 Pfam PF07689 KaiB domain 29 110 1.6E-26 T 11-10-2018 IPR011649 KaiB domain GO:0048511 syc1978_c 970fb36262e6c6279a67271feadba0cb 399 Gene3D G3DSA:3.40.30.10 25 113 1.3E-25 T 11-10-2018 syc1978_c 970fb36262e6c6279a67271feadba0cb 399 SMART SM01248 29 110 1.3E-26 T 11-10-2018 IPR011649 KaiB domain GO:0048511 syc1978_c 970fb36262e6c6279a67271feadba0cb 399 Gene3D G3DSA:3.30.565.10 243 396 2.8E-46 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily syc0967_c 2d5313a91eca39be6677b9a25036975e 363 Gene3D G3DSA:3.10.20.30 48 361 1.9E-151 T 11-10-2018 IPR012675 Beta-grasp domain superfamily syc0967_c 2d5313a91eca39be6677b9a25036975e 363 PIRSF PIRSF006641 1 363 5.1E-152 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 syc0967_c 2d5313a91eca39be6677b9a25036975e 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 8.5E-40 T 11-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 syc0967_c 2d5313a91eca39be6677b9a25036975e 363 Gene3D G3DSA:3.40.50.300 2 278 1.9E-151 T 11-10-2018 syc0967_c 2d5313a91eca39be6677b9a25036975e 363 SUPERFAMILY SSF81271 279 360 7.63E-35 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 syc0967_c 2d5313a91eca39be6677b9a25036975e 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 1 363 43.23 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 syc0967_c 2d5313a91eca39be6677b9a25036975e 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 1.6E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 syc0967_c 2d5313a91eca39be6677b9a25036975e 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 1.6E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 syc0967_c 2d5313a91eca39be6677b9a25036975e 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 4 24 1.6E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 syc0967_c 2d5313a91eca39be6677b9a25036975e 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 1.6E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 syc0967_c 2d5313a91eca39be6677b9a25036975e 363 Pfam PF01926 50S ribosome-binding GTPase 4 115 3.5E-23 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 syc0967_c 2d5313a91eca39be6677b9a25036975e 363 SUPERFAMILY SSF52540 2 301 4.86E-81 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0967_c 2d5313a91eca39be6677b9a25036975e 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 5.2E-157 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 syc0967_c 2d5313a91eca39be6677b9a25036975e 363 Gene3D G3DSA:1.10.150.300 113 199 1.9E-151 T 11-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 syc1123_d 3226c78c898eb2183a7fde7139322887 449 SUPERFAMILY SSF50685 102 448 5.58E-94 T 11-10-2018 IPR036908 RlpA-like domain superfamily syc1123_d 3226c78c898eb2183a7fde7139322887 449 Pfam PF03562 MltA specific insert domain 121 352 7.3E-57 T 11-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 syc1123_d 3226c78c898eb2183a7fde7139322887 449 Pfam PF06725 3D domain 371 445 2.3E-18 T 11-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 syc1123_d 3226c78c898eb2183a7fde7139322887 449 PIRSF PIRSF019422 52 449 1.7E-89 T 11-10-2018 IPR026044 Membrane-bound lytic murein transglycosylase A syc1123_d 3226c78c898eb2183a7fde7139322887 449 Gene3D G3DSA:2.40.40.10 356 449 1.9E-24 T 11-10-2018 IPR036908 RlpA-like domain superfamily syc1123_d 3226c78c898eb2183a7fde7139322887 449 SMART SM00925 211 352 3.6E-64 T 11-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 syc1123_d 3226c78c898eb2183a7fde7139322887 449 Gene3D G3DSA:2.40.240.50 211 355 7.8E-40 T 11-10-2018 syc0151_d 9146ab927f88ace3130a9f2ae96fd5af 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 223 9.2E-21 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 syc0151_d 9146ab927f88ace3130a9f2ae96fd5af 229 SMART SM00448 1 112 1.0E-41 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 syc0151_d 9146ab927f88ace3130a9f2ae96fd5af 229 Gene3D G3DSA:1.10.10.10 120 225 2.9E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily syc0151_d 9146ab927f88ace3130a9f2ae96fd5af 229 SMART SM00862 148 223 1.8E-20 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 syc0151_d 9146ab927f88ace3130a9f2ae96fd5af 229 Gene3D G3DSA:3.40.50.2300 1 119 2.3E-43 T 11-10-2018 syc0151_d 9146ab927f88ace3130a9f2ae96fd5af 229 Pfam PF00072 Response regulator receiver domain 3 113 9.1E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 syc0151_d 9146ab927f88ace3130a9f2ae96fd5af 229 SUPERFAMILY SSF46894 122 224 1.81E-24 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 syc0151_d 9146ab927f88ace3130a9f2ae96fd5af 229 SUPERFAMILY SSF52172 1 124 9.53E-42 T 11-10-2018 IPR011006 CheY-like superfamily syc1870_d e4bbe2fb80a8ee9781c7acb4a5453149 117 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 7 116 29.969 T 11-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc1870_d e4bbe2fb80a8ee9781c7acb4a5453149 117 SUPERFAMILY SSF54843 4 114 1.57E-44 T 11-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 syc1870_d e4bbe2fb80a8ee9781c7acb4a5453149 117 Gene3D G3DSA:3.90.470.10 4 117 3.4E-50 T 11-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 syc1870_d e4bbe2fb80a8ee9781c7acb4a5453149 117 Pfam PF00237 Ribosomal protein L22p/L17e 11 113 7.2E-37 T 11-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 syc1870_d e4bbe2fb80a8ee9781c7acb4a5453149 117 ProSitePatterns PS00464 Ribosomal protein L22 signature. 89 113 - T 11-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc1870_d e4bbe2fb80a8ee9781c7acb4a5453149 117 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 11 113 6.1E-42 T 11-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc0567_d 03e6713cc09bf345d9890a77ac55fff1 333 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 9 190 2.7E-71 T 11-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 syc0567_d 03e6713cc09bf345d9890a77ac55fff1 333 Gene3D G3DSA:3.40.50.300 3 217 4.1E-64 T 11-10-2018 syc0567_d 03e6713cc09bf345d9890a77ac55fff1 333 PRINTS PR00478 Phosphoribulokinase family signature 106 124 1.1E-31 T 11-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 syc0567_d 03e6713cc09bf345d9890a77ac55fff1 333 PRINTS PR00478 Phosphoribulokinase family signature 159 182 1.1E-31 T 11-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 syc0567_d 03e6713cc09bf345d9890a77ac55fff1 333 PRINTS PR00478 Phosphoribulokinase family signature 14 31 1.1E-31 T 11-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 syc0567_d 03e6713cc09bf345d9890a77ac55fff1 333 PRINTS PR00478 Phosphoribulokinase family signature 141 158 1.1E-31 T 11-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 syc0567_d 03e6713cc09bf345d9890a77ac55fff1 333 SUPERFAMILY SSF52540 6 261 8.08E-38 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0567_d 03e6713cc09bf345d9890a77ac55fff1 333 ProSitePatterns PS00567 Phosphoribulokinase signature. 141 154 - T 11-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 syc1119_c bfc3363f026b4590c75ae6f6f9ebc76e 520 SMART SM00798 142 455 5.3E-184 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 syc1119_c bfc3363f026b4590c75ae6f6f9ebc76e 520 SUPERFAMILY SSF52335 10 203 3.53E-65 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily syc1119_c bfc3363f026b4590c75ae6f6f9ebc76e 520 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 9 520 42.088 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 syc1119_c bfc3363f026b4590c75ae6f6f9ebc76e 520 Pfam PF02142 MGS-like domain 21 136 6.9E-26 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain syc1119_c bfc3363f026b4590c75ae6f6f9ebc76e 520 Gene3D G3DSA:3.40.50.1380 7 203 1.2E-80 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily syc1119_c bfc3363f026b4590c75ae6f6f9ebc76e 520 Gene3D G3DSA:3.40.140.20 391 520 6.0E-55 T 11-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 syc1119_c bfc3363f026b4590c75ae6f6f9ebc76e 520 SUPERFAMILY SSF53927 217 520 2.51E-119 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 syc1119_c bfc3363f026b4590c75ae6f6f9ebc76e 520 Gene3D G3DSA:3.40.140.20 211 368 2.0E-53 T 11-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 syc1119_c bfc3363f026b4590c75ae6f6f9ebc76e 520 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 10 520 3.5E-217 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 syc1119_c bfc3363f026b4590c75ae6f6f9ebc76e 520 SMART SM00851 21 137 1.4E-54 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain syc1119_c bfc3363f026b4590c75ae6f6f9ebc76e 520 Pfam PF01808 AICARFT/IMPCHase bienzyme 143 454 3.0E-113 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 syc1119_c bfc3363f026b4590c75ae6f6f9ebc76e 520 PIRSF PIRSF000414 6 520 2.3E-199 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 syc0568_c d95b3469d8f42544d4923274a0fc32d1 909 SMART SM00116 324 372 3.0E-11 T 11-10-2018 IPR000644 CBS domain syc0568_c d95b3469d8f42544d4923274a0fc32d1 909 SMART SM00116 387 434 1.3E-13 T 11-10-2018 IPR000644 CBS domain syc0568_c d95b3469d8f42544d4923274a0fc32d1 909 SUPERFAMILY SSF81891 630 889 1.27E-37 T 11-10-2018 syc0568_c d95b3469d8f42544d4923274a0fc32d1 909 Gene3D G3DSA:3.30.460.10 455 626 9.9E-43 T 11-10-2018 syc0568_c d95b3469d8f42544d4923274a0fc32d1 909 Gene3D G3DSA:1.10.3090.10 627 898 1.8E-61 T 11-10-2018 syc0568_c d95b3469d8f42544d4923274a0fc32d1 909 SUPERFAMILY SSF81301 462 628 1.85E-29 T 11-10-2018 syc0568_c d95b3469d8f42544d4923274a0fc32d1 909 Gene3D G3DSA:3.90.1640.10 1 183 3.4E-25 T 11-10-2018 syc0568_c d95b3469d8f42544d4923274a0fc32d1 909 SUPERFAMILY SSF64182 3 300 8.5E-43 T 11-10-2018 IPR038763 DHH phosphoesterase superfamily syc0568_c d95b3469d8f42544d4923274a0fc32d1 909 Pfam PF00571 CBS domain 381 433 1.5E-10 T 11-10-2018 IPR000644 CBS domain syc0568_c d95b3469d8f42544d4923274a0fc32d1 909 Pfam PF00571 CBS domain 317 372 8.1E-12 T 11-10-2018 IPR000644 CBS domain syc0568_c d95b3469d8f42544d4923274a0fc32d1 909 Pfam PF01368 DHH family 3 146 4.5E-7 T 11-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 syc0568_c d95b3469d8f42544d4923274a0fc32d1 909 SUPERFAMILY SSF54631 315 438 7.83E-35 T 11-10-2018 syc0568_c d95b3469d8f42544d4923274a0fc32d1 909 Pfam PF01743 Poly A polymerase head domain 485 631 4.4E-33 T 11-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 syc0568_c d95b3469d8f42544d4923274a0fc32d1 909 Gene3D G3DSA:3.10.580.10 309 451 4.2E-29 T 11-10-2018 syc0658_d 4972a2fa327046f7765653af6c6a0f19 218 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 194 8.6E-32 T 11-10-2018 IPR003111 Lon, substrate-binding domain syc0658_d 4972a2fa327046f7765653af6c6a0f19 218 Gene3D G3DSA:2.30.130.40 2 111 9.0E-31 T 11-10-2018 syc0658_d 4972a2fa327046f7765653af6c6a0f19 218 Gene3D G3DSA:1.20.58.1480 116 202 2.0E-6 T 11-10-2018 syc0658_d 4972a2fa327046f7765653af6c6a0f19 218 SMART SM00464 10 196 1.3E-46 T 11-10-2018 IPR003111 Lon, substrate-binding domain syc0658_d 4972a2fa327046f7765653af6c6a0f19 218 SUPERFAMILY SSF88697 10 194 1.62E-48 T 11-10-2018 IPR015947 PUA-like superfamily syc2282_c 7ac374033db038d98b2190797c110a27 1037 SUPERFAMILY SSF55073 870 1029 7.85E-47 T 11-10-2018 IPR029787 Nucleotide cyclase syc2282_c 7ac374033db038d98b2190797c110a27 1037 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 861 1027 1.0E-50 T 11-10-2018 IPR000160 GGDEF domain syc2282_c 7ac374033db038d98b2190797c110a27 1037 SMART SM00267 854 1028 1.3E-54 T 11-10-2018 IPR000160 GGDEF domain syc2282_c 7ac374033db038d98b2190797c110a27 1037 Gene3D G3DSA:3.30.450.20 734 862 9.1E-23 T 11-10-2018 syc2282_c 7ac374033db038d98b2190797c110a27 1037 SMART SM00091 223 290 9.6E-6 T 11-10-2018 IPR000014 PAS domain syc2282_c 7ac374033db038d98b2190797c110a27 1037 SMART SM00091 348 416 0.035 T 11-10-2018 IPR000014 PAS domain syc2282_c 7ac374033db038d98b2190797c110a27 1037 SMART SM00091 603 672 14.0 T 11-10-2018 IPR000014 PAS domain syc2282_c 7ac374033db038d98b2190797c110a27 1037 SMART SM00091 738 804 1.8E-5 T 11-10-2018 IPR000014 PAS domain syc2282_c 7ac374033db038d98b2190797c110a27 1037 SMART SM00091 477 543 0.049 T 11-10-2018 IPR000014 PAS domain syc2282_c 7ac374033db038d98b2190797c110a27 1037 SUPERFAMILY SSF55785 209 334 2.39E-16 T 11-10-2018 IPR035965 PAS domain superfamily syc2282_c 7ac374033db038d98b2190797c110a27 1037 Gene3D G3DSA:3.30.450.20 348 415 2.8E-15 T 11-10-2018 syc2282_c 7ac374033db038d98b2190797c110a27 1037 Pfam PF08447 PAS fold 501 583 2.4E-10 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 syc2282_c 7ac374033db038d98b2190797c110a27 1037 Pfam PF08447 PAS fold 371 457 7.1E-23 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 syc2282_c 7ac374033db038d98b2190797c110a27 1037 SUPERFAMILY SSF55785 461 583 6.98E-25 T 11-10-2018 IPR035965 PAS domain superfamily syc2282_c 7ac374033db038d98b2190797c110a27 1037 SUPERFAMILY SSF55785 355 468 2.09E-23 T 11-10-2018 IPR035965 PAS domain superfamily syc2282_c 7ac374033db038d98b2190797c110a27 1037 Gene3D G3DSA:3.30.70.270 863 1032 6.7E-54 T 11-10-2018 syc2282_c 7ac374033db038d98b2190797c110a27 1037 SUPERFAMILY SSF55785 588 721 1.38E-16 T 11-10-2018 IPR035965 PAS domain superfamily syc2282_c 7ac374033db038d98b2190797c110a27 1037 SMART SM00086 681 723 0.55 T 11-10-2018 IPR001610 PAC motif syc2282_c 7ac374033db038d98b2190797c110a27 1037 SMART SM00086 423 465 2.5E-8 T 11-10-2018 IPR001610 PAC motif syc2282_c 7ac374033db038d98b2190797c110a27 1037 SMART SM00086 809 854 37.0 T 11-10-2018 IPR001610 PAC motif syc2282_c 7ac374033db038d98b2190797c110a27 1037 SMART SM00086 549 591 4.8E-10 T 11-10-2018 IPR001610 PAC motif syc2282_c 7ac374033db038d98b2190797c110a27 1037 SMART SM00086 296 336 1.2 T 11-10-2018 IPR001610 PAC motif syc2282_c 7ac374033db038d98b2190797c110a27 1037 Gene3D G3DSA:3.30.450.20 468 588 7.1E-24 T 11-10-2018 syc2282_c 7ac374033db038d98b2190797c110a27 1037 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 220 341 1.5E-10 T 11-10-2018 IPR000014 PAS domain syc2282_c 7ac374033db038d98b2190797c110a27 1037 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 738 861 2.6E-11 T 11-10-2018 IPR000014 PAS domain syc2282_c 7ac374033db038d98b2190797c110a27 1037 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 344 472 1.1E-13 T 11-10-2018 IPR000014 PAS domain syc2282_c 7ac374033db038d98b2190797c110a27 1037 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 473 598 2.1E-16 T 11-10-2018 IPR000014 PAS domain syc2282_c 7ac374033db038d98b2190797c110a27 1037 Gene3D G3DSA:2.10.70.100 420 467 8.6E-16 T 11-10-2018 syc2282_c 7ac374033db038d98b2190797c110a27 1037 SUPERFAMILY SSF55785 727 852 3.89E-18 T 11-10-2018 IPR035965 PAS domain superfamily syc2282_c 7ac374033db038d98b2190797c110a27 1037 Gene3D G3DSA:3.30.450.20 225 347 4.2E-18 T 11-10-2018 syc2282_c 7ac374033db038d98b2190797c110a27 1037 Pfam PF13426 PAS domain 233 335 3.4E-10 T 11-10-2018 IPR000014 PAS domain syc2282_c 7ac374033db038d98b2190797c110a27 1037 Gene3D G3DSA:3.30.450.20 599 733 6.3E-15 T 11-10-2018 syc2282_c 7ac374033db038d98b2190797c110a27 1037 Pfam PF08448 PAS fold 609 724 6.2E-5 T 11-10-2018 IPR013656 PAS fold-4 syc2282_c 7ac374033db038d98b2190797c110a27 1037 Pfam PF08448 PAS fold 744 855 2.7E-15 T 11-10-2018 IPR013656 PAS fold-4 syc2282_c 7ac374033db038d98b2190797c110a27 1037 Pfam PF00990 Diguanylate cyclase, GGDEF domain 865 1024 2.0E-44 T 11-10-2018 IPR000160 GGDEF domain syc1862_d ccc8d6f209e505ec1d7ed48c8debd395 554 SUPERFAMILY SSF52540 300 544 3.79E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc1862_d ccc8d6f209e505ec1d7ed48c8debd395 554 ProSitePatterns PS00211 ABC transporters family signature. 445 459 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 syc1862_d ccc8d6f209e505ec1d7ed48c8debd395 554 SUPERFAMILY SSF52540 5 259 4.92E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc1862_d ccc8d6f209e505ec1d7ed48c8debd395 554 Pfam PF00005 ABC transporter 321 471 2.0E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 syc1862_d ccc8d6f209e505ec1d7ed48c8debd395 554 Gene3D G3DSA:3.40.50.300 3 293 8.6E-80 T 11-10-2018 syc1862_d ccc8d6f209e505ec1d7ed48c8debd395 554 Gene3D G3DSA:3.40.50.300 298 554 4.2E-84 T 11-10-2018 syc1862_d ccc8d6f209e505ec1d7ed48c8debd395 554 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 525 550 0.026 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 syc1862_d ccc8d6f209e505ec1d7ed48c8debd395 554 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 240 271 5.1E-7 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 syc1862_d ccc8d6f209e505ec1d7ed48c8debd395 554 SMART SM00382 30 238 7.3E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain syc1862_d ccc8d6f209e505ec1d7ed48c8debd395 554 SMART SM00382 329 522 3.3E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain syc1862_d ccc8d6f209e505ec1d7ed48c8debd395 554 Pfam PF00005 ABC transporter 21 188 2.1E-22 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 syc1862_d ccc8d6f209e505ec1d7ed48c8debd395 554 ProSitePatterns PS00211 ABC transporters family signature. 161 175 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 syc2488_d b7675c964e00d510871203f36f8018b5 259 SMART SM00363 184 244 5.8E-10 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc2488_d b7675c964e00d510871203f36f8018b5 259 Gene3D G3DSA:3.30.1370.160 10 78 4.1E-5 T 11-10-2018 syc2488_d b7675c964e00d510871203f36f8018b5 259 Gene3D G3DSA:3.10.290.10 175 235 9.2E-11 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 syc2488_d b7675c964e00d510871203f36f8018b5 259 SUPERFAMILY SSF55174 50 243 2.88E-28 T 11-10-2018 syc2488_d b7675c964e00d510871203f36f8018b5 259 Pfam PF01479 S4 domain 185 230 1.7E-10 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc2488_d b7675c964e00d510871203f36f8018b5 259 Gene3D G3DSA:3.30.70.330 83 168 4.1E-14 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily syc2488_d b7675c964e00d510871203f36f8018b5 259 TIGRFAM TIGR03069 PS_II_S4: photosystem II S4 domain protein 2 257 1.0E-113 T 11-10-2018 IPR017506 Photosystem II S4 syc0824_d bf89b1cbf5533d7dd564f060ac1b8d3f 204 Gene3D G3DSA:3.40.50.150 9 204 1.1E-55 T 11-10-2018 syc0824_d bf89b1cbf5533d7dd564f060ac1b8d3f 204 TIGRFAM TIGR02469 CbiT: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 29 150 3.0E-38 T 11-10-2018 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit GO:0008276|GO:0009236 KEGG: 00860+2.1.1.196|MetaCyc: PWY-7377 syc0824_d bf89b1cbf5533d7dd564f060ac1b8d3f 204 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 40 109 8.6E-5 T 11-10-2018 syc0824_d bf89b1cbf5533d7dd564f060ac1b8d3f 204 SUPERFAMILY SSF53335 21 173 1.15E-24 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase syc1666_d 472218dd10b4aec4904f2cfb94677194 716 Pfam PF00575 S1 RNA binding domain 629 699 2.9E-14 T 11-10-2018 IPR003029 S1 domain GO:0003676 syc1666_d 472218dd10b4aec4904f2cfb94677194 716 SUPERFAMILY SSF54791 564 649 3.45E-22 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 syc1666_d 472218dd10b4aec4904f2cfb94677194 716 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 240 328 3.2E-18 T 11-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 syc1666_d 472218dd10b4aec4904f2cfb94677194 716 SUPERFAMILY SSF50249 622 702 8.21E-19 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold syc1666_d 472218dd10b4aec4904f2cfb94677194 716 SUPERFAMILY SSF55666 459 557 5.5E-28 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 syc1666_d 472218dd10b4aec4904f2cfb94677194 716 SMART SM00322 561 626 9.9E-13 T 11-10-2018 IPR004087 K Homology domain GO:0003676 syc1666_d 472218dd10b4aec4904f2cfb94677194 716 SUPERFAMILY SSF54211 4 142 4.71E-44 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold syc1666_d 472218dd10b4aec4904f2cfb94677194 716 Gene3D G3DSA:2.40.50.140 631 702 3.0E-23 T 11-10-2018 syc1666_d 472218dd10b4aec4904f2cfb94677194 716 SUPERFAMILY SSF55666 143 227 1.83E-26 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 syc1666_d 472218dd10b4aec4904f2cfb94677194 716 Gene3D G3DSA:3.30.230.70 231 558 7.4E-116 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 syc1666_d 472218dd10b4aec4904f2cfb94677194 716 SUPERFAMILY SSF46915 237 329 2.51E-14 T 11-10-2018 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 syc1666_d 472218dd10b4aec4904f2cfb94677194 716 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 10 700 1.3E-294 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 syc1666_d 472218dd10b4aec4904f2cfb94677194 716 Gene3D G3DSA:3.30.1370.10 559 630 1.2E-19 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 syc1666_d 472218dd10b4aec4904f2cfb94677194 716 PIRSF PIRSF005499 1 716 8.2E-285 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 syc1666_d 472218dd10b4aec4904f2cfb94677194 716 Gene3D G3DSA:3.30.230.70 1 227 7.1E-76 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 syc1666_d 472218dd10b4aec4904f2cfb94677194 716 SMART SM00316 629 699 1.0E-22 T 11-10-2018 IPR022967 RNA-binding domain, S1 syc1666_d 472218dd10b4aec4904f2cfb94677194 716 Pfam PF01138 3' exoribonuclease family, domain 1 12 142 1.4E-17 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 syc1666_d 472218dd10b4aec4904f2cfb94677194 716 Pfam PF01138 3' exoribonuclease family, domain 1 331 465 7.8E-18 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 syc1666_d 472218dd10b4aec4904f2cfb94677194 716 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 2 702 29.448 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 syc1666_d 472218dd10b4aec4904f2cfb94677194 716 SUPERFAMILY SSF54211 302 496 2.23E-47 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold syc1666_d 472218dd10b4aec4904f2cfb94677194 716 Pfam PF03725 3' exoribonuclease family, domain 2 146 209 1.6E-16 T 11-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 syc1666_d 472218dd10b4aec4904f2cfb94677194 716 Pfam PF00013 KH domain 566 622 3.0E-12 T 11-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 syc1700_d 00ac53c72b31b88a803c72bdb07e7cbe 84 Gene3D G3DSA:3.30.1330.80 1 84 1.1E-21 T 11-10-2018 syc1700_d 00ac53c72b31b88a803c72bdb07e7cbe 84 Pfam PF03479 Domain of unknown function (DUF296) 4 83 2.5E-16 T 11-10-2018 IPR005175 PPC domain syc1700_d 00ac53c72b31b88a803c72bdb07e7cbe 84 SUPERFAMILY SSF117856 2 83 1.28E-21 T 11-10-2018 syc1658_c 6753817a1a0f9fd06fbbc015e85f828d 535 Pfam PF13167 GTP-binding GTPase N-terminal 192 279 2.2E-28 T 11-10-2018 IPR025121 GTPase HflX, N-terminal syc1658_c 6753817a1a0f9fd06fbbc015e85f828d 535 Pfam PF16360 GTP-binding GTPase Middle Region 281 359 1.1E-26 T 11-10-2018 IPR032305 GTP-binding protein, middle domain syc1658_c 6753817a1a0f9fd06fbbc015e85f828d 535 SUPERFAMILY SSF52540 363 528 5.21E-36 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc1658_c 6753817a1a0f9fd06fbbc015e85f828d 535 Hamap MF_00900 GTPase HflX [hflX]. 194 535 43.503 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 syc1658_c 6753817a1a0f9fd06fbbc015e85f828d 535 Gene3D G3DSA:3.40.50.11060 183 305 7.8E-38 T 11-10-2018 syc1658_c 6753817a1a0f9fd06fbbc015e85f828d 535 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 386 404 1.3E-9 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 syc1658_c 6753817a1a0f9fd06fbbc015e85f828d 535 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 365 385 1.3E-9 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 syc1658_c 6753817a1a0f9fd06fbbc015e85f828d 535 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 437 455 1.3E-9 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 syc1658_c 6753817a1a0f9fd06fbbc015e85f828d 535 Pfam PF01926 50S ribosome-binding GTPase 365 488 9.2E-18 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 syc1658_c 6753817a1a0f9fd06fbbc015e85f828d 535 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 174 527 1.3E-135 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 syc1658_c 6753817a1a0f9fd06fbbc015e85f828d 535 PIRSF PIRSF006809 166 535 8.5E-130 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 syc1658_c 6753817a1a0f9fd06fbbc015e85f828d 535 Gene3D G3DSA:3.40.50.300 362 534 2.0E-35 T 11-10-2018 syc1781_c b1e0ac110acaec63d158006cb097c623 173 SUPERFAMILY SSF48452 29 160 7.11E-22 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc1781_c b1e0ac110acaec63d158006cb097c623 173 Pfam PF13424 Tetratricopeptide repeat 42 102 2.4E-8 T 11-10-2018 syc1781_c b1e0ac110acaec63d158006cb097c623 173 SMART SM00028 35 68 0.0011 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc1781_c b1e0ac110acaec63d158006cb097c623 173 SMART SM00028 72 105 4.0E-5 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc1781_c b1e0ac110acaec63d158006cb097c623 173 SMART SM00028 106 153 10.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc1781_c b1e0ac110acaec63d158006cb097c623 173 Hamap MF_00439 Photosystem I assembly protein Ycf3 [ycf3]. 1 168 42.74 T 11-10-2018 IPR022818 Photosystem I Ycf3, assembly syc1781_c b1e0ac110acaec63d158006cb097c623 173 Gene3D G3DSA:1.25.40.10 9 168 9.0E-25 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc1615_c 04b0b6cae04c32d3cb24ee6e9b286887 645 Pfam PF01751 Toprim domain 427 536 7.0E-18 T 11-10-2018 IPR006171 TOPRIM domain syc1615_c 04b0b6cae04c32d3cb24ee6e9b286887 645 PRINTS PR01159 DNA gyrase subunit B signature 382 402 1.0E-67 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 syc1615_c 04b0b6cae04c32d3cb24ee6e9b286887 645 PRINTS PR01159 DNA gyrase subunit B signature 368 382 1.0E-67 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 syc1615_c 04b0b6cae04c32d3cb24ee6e9b286887 645 PRINTS PR01159 DNA gyrase subunit B signature 596 608 1.0E-67 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 syc1615_c 04b0b6cae04c32d3cb24ee6e9b286887 645 PRINTS PR01159 DNA gyrase subunit B signature 196 209 1.0E-67 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 syc1615_c 04b0b6cae04c32d3cb24ee6e9b286887 645 PRINTS PR01159 DNA gyrase subunit B signature 320 336 1.0E-67 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 syc1615_c 04b0b6cae04c32d3cb24ee6e9b286887 645 PRINTS PR01159 DNA gyrase subunit B signature 612 628 1.0E-67 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 syc1615_c 04b0b6cae04c32d3cb24ee6e9b286887 645 PRINTS PR01159 DNA gyrase subunit B signature 181 196 1.0E-67 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 syc1615_c 04b0b6cae04c32d3cb24ee6e9b286887 645 PRINTS PR01159 DNA gyrase subunit B signature 227 249 1.0E-67 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 syc1615_c 04b0b6cae04c32d3cb24ee6e9b286887 645 PRINTS PR01159 DNA gyrase subunit B signature 478 487 1.0E-67 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 syc1615_c 04b0b6cae04c32d3cb24ee6e9b286887 645 PRINTS PR01159 DNA gyrase subunit B signature 5 15 1.0E-67 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 syc1615_c 04b0b6cae04c32d3cb24ee6e9b286887 645 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 174 2.3E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase syc1615_c 04b0b6cae04c32d3cb24ee6e9b286887 645 Gene3D G3DSA:3.30.565.10 1 226 5.8E-91 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily syc1615_c 04b0b6cae04c32d3cb24ee6e9b286887 645 Gene3D G3DSA:3.30.230.10 227 406 4.0E-67 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup syc1615_c 04b0b6cae04c32d3cb24ee6e9b286887 645 PRINTS PR00418 DNA topoisomerase II family signature 575 591 3.9E-70 T 11-10-2018 syc1615_c 04b0b6cae04c32d3cb24ee6e9b286887 645 PRINTS PR00418 DNA topoisomerase II family signature 69 82 3.9E-70 T 11-10-2018 syc1615_c 04b0b6cae04c32d3cb24ee6e9b286887 645 PRINTS PR00418 DNA topoisomerase II family signature 276 289 3.9E-70 T 11-10-2018 syc1615_c 04b0b6cae04c32d3cb24ee6e9b286887 645 PRINTS PR00418 DNA topoisomerase II family signature 34 49 3.9E-70 T 11-10-2018 syc1615_c 04b0b6cae04c32d3cb24ee6e9b286887 645 PRINTS PR00418 DNA topoisomerase II family signature 428 442 3.9E-70 T 11-10-2018 syc1615_c 04b0b6cae04c32d3cb24ee6e9b286887 645 PRINTS PR00418 DNA topoisomerase II family signature 495 511 3.9E-70 T 11-10-2018 syc1615_c 04b0b6cae04c32d3cb24ee6e9b286887 645 PRINTS PR00418 DNA topoisomerase II family signature 112 126 3.9E-70 T 11-10-2018 syc1615_c 04b0b6cae04c32d3cb24ee6e9b286887 645 PRINTS PR00418 DNA topoisomerase II family signature 513 530 3.9E-70 T 11-10-2018 syc1615_c 04b0b6cae04c32d3cb24ee6e9b286887 645 PRINTS PR00418 DNA topoisomerase II family signature 533 545 3.9E-70 T 11-10-2018 syc1615_c 04b0b6cae04c32d3cb24ee6e9b286887 645 SUPERFAMILY SSF55874 5 213 3.93E-72 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily syc1615_c 04b0b6cae04c32d3cb24ee6e9b286887 645 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 5 645 0.0 T 11-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 syc1615_c 04b0b6cae04c32d3cb24ee6e9b286887 645 SMART SM00433 34 636 0.0 T 11-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 syc1615_c 04b0b6cae04c32d3cb24ee6e9b286887 645 Pfam PF00204 DNA gyrase B 228 398 3.7E-58 T 11-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 syc1615_c 04b0b6cae04c32d3cb24ee6e9b286887 645 SUPERFAMILY SSF54211 228 399 3.03E-54 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold syc1615_c 04b0b6cae04c32d3cb24ee6e9b286887 645 ProSitePatterns PS00177 DNA topoisomerase II signature. 430 438 - T 11-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 syc1615_c 04b0b6cae04c32d3cb24ee6e9b286887 645 SUPERFAMILY SSF56719 402 638 2.62E-92 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 syc1615_c 04b0b6cae04c32d3cb24ee6e9b286887 645 Gene3D G3DSA:3.40.50.670 407 644 1.9E-107 T 11-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 syc1615_c 04b0b6cae04c32d3cb24ee6e9b286887 645 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 571 632 2.4E-30 T 11-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 syc1615_c 04b0b6cae04c32d3cb24ee6e9b286887 645 SMART SM00387 30 175 6.3E-28 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase syc1615_c 04b0b6cae04c32d3cb24ee6e9b286887 645 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 2 645 87.101 T 11-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 syc0481_c c7582d2156f69628a8177bf0c71696bb 431 Gene3D G3DSA:2.40.50.100 1 102 1.3E-29 T 11-10-2018 syc0481_c c7582d2156f69628a8177bf0c71696bb 431 Pfam PF00364 Biotin-requiring enzyme 4 76 1.9E-17 T 11-10-2018 IPR000089 Biotin/lipoyl attachment syc0481_c c7582d2156f69628a8177bf0c71696bb 431 SUPERFAMILY SSF51230 1 93 3.27E-25 T 11-10-2018 IPR011053 Single hybrid motif syc0481_c c7582d2156f69628a8177bf0c71696bb 431 SUPERFAMILY SSF47005 124 168 8.11E-11 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 syc0481_c c7582d2156f69628a8177bf0c71696bb 431 Pfam PF02817 e3 binding domain 131 165 3.9E-14 T 11-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 syc0481_c c7582d2156f69628a8177bf0c71696bb 431 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 syc0481_c c7582d2156f69628a8177bf0c71696bb 431 Gene3D G3DSA:3.30.559.10 193 429 5.0E-63 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 syc0481_c c7582d2156f69628a8177bf0c71696bb 431 SUPERFAMILY SSF52777 197 425 1.87E-61 T 11-10-2018 syc0481_c c7582d2156f69628a8177bf0c71696bb 431 Gene3D G3DSA:4.10.320.10 127 169 4.0E-15 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 syc0481_c c7582d2156f69628a8177bf0c71696bb 431 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 212 429 3.5E-61 T 11-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 syc1788_d 436202b3aa1ccf9b800ab1b77eb8bcb0 103 SUPERFAMILY SSF50129 10 102 8.17E-35 T 11-10-2018 IPR011032 GroES-like superfamily syc1788_d 436202b3aa1ccf9b800ab1b77eb8bcb0 103 Hamap MF_00580 10 kDa chaperonin [groS]. 10 103 26.046 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 syc1788_d 436202b3aa1ccf9b800ab1b77eb8bcb0 103 Pfam PF00166 Chaperonin 10 Kd subunit 11 102 1.5E-35 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 syc1788_d 436202b3aa1ccf9b800ab1b77eb8bcb0 103 ProSitePatterns PS00681 Chaperonins cpn10 signature. 11 35 - T 11-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 syc1788_d 436202b3aa1ccf9b800ab1b77eb8bcb0 103 PRINTS PR00297 10kDa chaperonin signature 33 54 7.4E-32 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 syc1788_d 436202b3aa1ccf9b800ab1b77eb8bcb0 103 PRINTS PR00297 10kDa chaperonin signature 68 80 7.4E-32 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 syc1788_d 436202b3aa1ccf9b800ab1b77eb8bcb0 103 PRINTS PR00297 10kDa chaperonin signature 11 26 7.4E-32 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 syc1788_d 436202b3aa1ccf9b800ab1b77eb8bcb0 103 PRINTS PR00297 10kDa chaperonin signature 89 102 7.4E-32 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 syc1788_d 436202b3aa1ccf9b800ab1b77eb8bcb0 103 Gene3D G3DSA:2.30.33.40 5 103 7.6E-40 T 11-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 syc1788_d 436202b3aa1ccf9b800ab1b77eb8bcb0 103 SMART SM00883 10 102 2.7E-53 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 syc0663_c 7f5e55d1c80c17137be9892b1693e536 872 SMART SM00729 258 477 3.7E-28 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 syc0663_c 7f5e55d1c80c17137be9892b1693e536 872 Gene3D G3DSA:3.80.30.20 257 487 3.2E-18 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe syc0663_c 7f5e55d1c80c17137be9892b1693e536 872 Pfam PF10105 Uncharacterized protein conserved in bacteria (DUF2344) 646 816 1.4E-50 T 11-10-2018 IPR018768 Domain of unknown function DUF2344 syc0663_c 7f5e55d1c80c17137be9892b1693e536 872 SUPERFAMILY SSF102114 246 615 9.52E-36 T 11-10-2018 syc0663_c 7f5e55d1c80c17137be9892b1693e536 872 TIGRFAM TIGR03960 rSAM_fuse_unch: radical SAM family uncharacterized protein 12 617 8.8E-177 T 11-10-2018 IPR023862 Conserved hypothetical protein CHP03960, radical SAM syc0663_c 7f5e55d1c80c17137be9892b1693e536 872 TIGRFAM TIGR03936 sam_1_link_chp: radical SAM-linked protein 646 869 2.7E-57 T 11-10-2018 IPR018768 Domain of unknown function DUF2344 syc0663_c 7f5e55d1c80c17137be9892b1693e536 872 Pfam PF04055 Radical SAM superfamily 263 425 1.2E-16 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 syc1085_c e2d9a64d8fe6b144c31d908955015f9b 232 SUPERFAMILY SSF55166 15 216 1.96E-58 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 syc1085_c e2d9a64d8fe6b144c31d908955015f9b 232 Gene3D G3DSA:3.30.1380.10 34 218 6.8E-51 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 syc1085_c e2d9a64d8fe6b144c31d908955015f9b 232 PIRSF PIRSF026671 1 226 6.7E-63 T 11-10-2018 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 syc1085_c e2d9a64d8fe6b144c31d908955015f9b 232 Pfam PF01427 D-ala-D-ala dipeptidase 30 218 2.0E-46 T 11-10-2018 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 syc1085_c e2d9a64d8fe6b144c31d908955015f9b 232 Hamap MF_01924 D-alanyl-D-alanine dipeptidase [ddpX]. 13 220 29.838 T 11-10-2018 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 syc1226_c 7c8ae66cc2d815f0f5c4082b46061000 120 Gene3D G3DSA:3.30.2120.20 1 120 1.7E-53 T 11-10-2018 syc1226_c 7c8ae66cc2d815f0f5c4082b46061000 120 Pfam PF08853 Domain of unknown function (DUF1823) 5 115 4.6E-50 T 11-10-2018 IPR014952 Protein of unknown function DUF1823 syc1953_c ccb98d4f96ff3fde92de0eba0ba02302 203 Gene3D G3DSA:1.20.1050.10 82 196 9.2E-39 T 11-10-2018 syc1953_c ccb98d4f96ff3fde92de0eba0ba02302 203 Gene3D G3DSA:3.40.30.10 2 81 7.9E-22 T 11-10-2018 syc1953_c ccb98d4f96ff3fde92de0eba0ba02302 203 SUPERFAMILY SSF47616 73 198 5.43E-28 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily syc1953_c ccb98d4f96ff3fde92de0eba0ba02302 203 Pfam PF02798 Glutathione S-transferase, N-terminal domain 10 76 2.1E-13 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 syc1953_c ccb98d4f96ff3fde92de0eba0ba02302 203 Pfam PF00043 Glutathione S-transferase, C-terminal domain 106 193 2.0E-8 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal syc1953_c ccb98d4f96ff3fde92de0eba0ba02302 203 SUPERFAMILY SSF52833 2 88 1.8E-19 T 11-10-2018 IPR036249 Thioredoxin-like superfamily syc2516_c 17a8dab3dbccc31bdd3c03b8ffa0d1a4 141 Pfam PF03459 TOBE domain 75 137 6.0E-13 T 11-10-2018 IPR005116 Transport-associated OB, type 1 syc2516_c 17a8dab3dbccc31bdd3c03b8ffa0d1a4 141 SUPERFAMILY SSF50331 72 140 6.07E-18 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal syc2516_c 17a8dab3dbccc31bdd3c03b8ffa0d1a4 141 Gene3D G3DSA:2.40.50.100 72 138 1.5E-20 T 11-10-2018 syc2516_c 17a8dab3dbccc31bdd3c03b8ffa0d1a4 141 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 72 139 1.2E-17 T 11-10-2018 IPR004606 Molybdenum-pterin binding GO:0015689 syc0830_d 4741a8e9f266dfeacc2ea66812fcdf87 277 PRINTS PR01438 Universal stress protein signature 2 20 5.0E-9 T 11-10-2018 IPR006015 Universal stress protein A syc0830_d 4741a8e9f266dfeacc2ea66812fcdf87 277 PRINTS PR01438 Universal stress protein signature 110 132 5.0E-9 T 11-10-2018 IPR006015 Universal stress protein A syc0830_d 4741a8e9f266dfeacc2ea66812fcdf87 277 PRINTS PR01438 Universal stress protein signature 92 104 5.0E-9 T 11-10-2018 IPR006015 Universal stress protein A syc0830_d 4741a8e9f266dfeacc2ea66812fcdf87 277 Gene3D G3DSA:3.40.50.620 1 133 7.2E-23 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold syc0830_d 4741a8e9f266dfeacc2ea66812fcdf87 277 SUPERFAMILY SSF52402 141 274 1.84E-21 T 11-10-2018 syc0830_d 4741a8e9f266dfeacc2ea66812fcdf87 277 Pfam PF00582 Universal stress protein family 141 274 1.4E-20 T 11-10-2018 IPR006016 UspA syc0830_d 4741a8e9f266dfeacc2ea66812fcdf87 277 Pfam PF00582 Universal stress protein family 1 132 1.6E-23 T 11-10-2018 IPR006016 UspA syc0830_d 4741a8e9f266dfeacc2ea66812fcdf87 277 Gene3D G3DSA:3.40.50.620 134 272 3.2E-21 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold syc0830_d 4741a8e9f266dfeacc2ea66812fcdf87 277 SUPERFAMILY SSF52402 3 139 6.45E-27 T 11-10-2018 syc2017_c 685c2b42eb3e755518acd3a6585fa33b 350 Pfam PF03193 RsgA GTPase 70 234 4.5E-58 T 11-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 syc2017_c 685c2b42eb3e755518acd3a6585fa33b 350 SUPERFAMILY SSF52540 77 288 4.09E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc2017_c 685c2b42eb3e755518acd3a6585fa33b 350 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 5 293 32.817 T 11-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 syc2017_c 685c2b42eb3e755518acd3a6585fa33b 350 SUPERFAMILY SSF50249 5 73 1.75E-9 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold syc2017_c 685c2b42eb3e755518acd3a6585fa33b 350 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 47 283 1.3E-71 T 11-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 syc2017_c 685c2b42eb3e755518acd3a6585fa33b 350 Gene3D G3DSA:1.10.40.50 236 296 2.0E-10 T 11-10-2018 syc2017_c 685c2b42eb3e755518acd3a6585fa33b 350 Gene3D G3DSA:2.40.50.140 1 70 1.4E-5 T 11-10-2018 syc2017_c 685c2b42eb3e755518acd3a6585fa33b 350 Gene3D G3DSA:3.40.50.300 73 232 6.5E-43 T 11-10-2018 syc0177_c d98340fc8b27df7154f3f683f43d2d55 453 SMART SM00878 337 443 5.6E-66 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 syc0177_c d98340fc8b27df7154f3f683f43d2d55 453 SUPERFAMILY SSF52440 2 114 3.6E-48 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily syc0177_c d98340fc8b27df7154f3f683f43d2d55 453 Pfam PF02785 Biotin carboxylase C-terminal domain 337 444 2.9E-41 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 syc0177_c d98340fc8b27df7154f3f683f43d2d55 453 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 323 2.0E-85 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 syc0177_c d98340fc8b27df7154f3f683f43d2d55 453 Pfam PF00289 Biotin carboxylase, N-terminal domain 3 111 3.3E-44 T 11-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 syc0177_c d98340fc8b27df7154f3f683f43d2d55 453 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 287 294 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 syc0177_c d98340fc8b27df7154f3f683f43d2d55 453 Gene3D G3DSA:3.30.470.130 1 448 9.2E-202 T 11-10-2018 syc0177_c d98340fc8b27df7154f3f683f43d2d55 453 SUPERFAMILY SSF51246 332 445 5.23E-45 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 syc0177_c d98340fc8b27df7154f3f683f43d2d55 453 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 syc0177_c d98340fc8b27df7154f3f683f43d2d55 453 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 3 445 9.7E-242 T 11-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 syc0177_c d98340fc8b27df7154f3f683f43d2d55 453 SUPERFAMILY SSF56059 84 353 4.95E-75 T 11-10-2018 syc0470_c 0897708ab47d2f8785dfc98351317a87 817 SMART SM00490 624 708 2.5E-18 T 11-10-2018 IPR001650 Helicase, C-terminal syc0470_c 0897708ab47d2f8785dfc98351317a87 817 SMART SM00487 389 579 5.4E-35 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain syc0470_c 0897708ab47d2f8785dfc98351317a87 817 Gene3D G3DSA:3.40.50.300 337 569 4.0E-86 T 11-10-2018 syc0470_c 0897708ab47d2f8785dfc98351317a87 817 SUPERFAMILY SSF52540 309 573 3.41E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0470_c 0897708ab47d2f8785dfc98351317a87 817 SUPERFAMILY SSF52540 572 772 2.55E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0470_c 0897708ab47d2f8785dfc98351317a87 817 Gene3D G3DSA:2.40.50.140 163 266 2.9E-10 T 11-10-2018 syc0470_c 0897708ab47d2f8785dfc98351317a87 817 SUPERFAMILY SSF50249 118 304 7.02E-42 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold syc0470_c 0897708ab47d2f8785dfc98351317a87 817 Pfam PF17191 RecG wedge domain 126 301 3.7E-21 T 11-10-2018 IPR033454 RecG, wedge domain syc0470_c 0897708ab47d2f8785dfc98351317a87 817 Pfam PF00271 Helicase conserved C-terminal domain 598 707 7.6E-17 T 11-10-2018 IPR001650 Helicase, C-terminal syc0470_c 0897708ab47d2f8785dfc98351317a87 817 Pfam PF00270 DEAD/DEAH box helicase 396 551 1.4E-16 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 syc0470_c 0897708ab47d2f8785dfc98351317a87 817 Gene3D G3DSA:3.40.50.300 577 748 6.0E-57 T 11-10-2018 syc0470_c 0897708ab47d2f8785dfc98351317a87 817 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 143 782 1.3E-241 T 11-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 syc0198_d c77ce3c7c2f7a457b134e30e753b594b 1165 Gene3D G3DSA:3.30.450.40 1 144 3.2E-24 T 11-10-2018 IPR029016 GAF-like domain superfamily syc0198_d c77ce3c7c2f7a457b134e30e753b594b 1165 SMART SM00388 940 1007 5.8E-7 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 syc0198_d c77ce3c7c2f7a457b134e30e753b594b 1165 SUPERFAMILY SSF55781 275 459 3.49E-21 T 11-10-2018 syc0198_d c77ce3c7c2f7a457b134e30e753b594b 1165 Gene3D G3DSA:3.30.450.20 557 674 3.4E-16 T 11-10-2018 syc0198_d c77ce3c7c2f7a457b134e30e753b594b 1165 SUPERFAMILY SSF55785 556 674 7.78E-17 T 11-10-2018 IPR035965 PAS domain superfamily syc0198_d c77ce3c7c2f7a457b134e30e753b594b 1165 Gene3D G3DSA:3.30.450.20 808 916 4.5E-31 T 11-10-2018 syc0198_d c77ce3c7c2f7a457b134e30e753b594b 1165 Gene3D G3DSA:3.30.450.20 145 260 7.0E-22 T 11-10-2018 syc0198_d c77ce3c7c2f7a457b134e30e753b594b 1165 Pfam PF08448 PAS fold 578 677 2.2E-9 T 11-10-2018 IPR013656 PAS fold-4 syc0198_d c77ce3c7c2f7a457b134e30e753b594b 1165 Pfam PF08448 PAS fold 156 260 4.2E-11 T 11-10-2018 IPR013656 PAS fold-4 syc0198_d c77ce3c7c2f7a457b134e30e753b594b 1165 Pfam PF08448 PAS fold 821 922 7.8E-14 T 11-10-2018 IPR013656 PAS fold-4 syc0198_d c77ce3c7c2f7a457b134e30e753b594b 1165 Gene3D G3DSA:3.30.450.20 700 807 7.2E-16 T 11-10-2018 syc0198_d c77ce3c7c2f7a457b134e30e753b594b 1165 SUPERFAMILY SSF55785 446 557 1.92E-8 T 11-10-2018 IPR035965 PAS domain superfamily syc0198_d c77ce3c7c2f7a457b134e30e753b594b 1165 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 570 682 1.2E-13 T 11-10-2018 IPR000014 PAS domain syc0198_d c77ce3c7c2f7a457b134e30e753b594b 1165 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 142 264 3.7E-18 T 11-10-2018 IPR000014 PAS domain syc0198_d c77ce3c7c2f7a457b134e30e753b594b 1165 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 815 927 1.5E-9 T 11-10-2018 IPR000014 PAS domain syc0198_d c77ce3c7c2f7a457b134e30e753b594b 1165 SUPERFAMILY SSF55874 997 1159 4.06E-39 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily syc0198_d c77ce3c7c2f7a457b134e30e753b594b 1165 SUPERFAMILY SSF55785 799 909 9.72E-19 T 11-10-2018 IPR035965 PAS domain superfamily syc0198_d c77ce3c7c2f7a457b134e30e753b594b 1165 Pfam PF13188 PAS domain 463 511 0.074 T 11-10-2018 IPR000014 PAS domain syc0198_d c77ce3c7c2f7a457b134e30e753b594b 1165 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1121 1139 3.2E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 syc0198_d c77ce3c7c2f7a457b134e30e753b594b 1165 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1106 1116 3.2E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 syc0198_d c77ce3c7c2f7a457b134e30e753b594b 1165 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1145 1158 3.2E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 syc0198_d c77ce3c7c2f7a457b134e30e753b594b 1165 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1088 1102 3.2E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 syc0198_d c77ce3c7c2f7a457b134e30e753b594b 1165 SUPERFAMILY SSF47384 926 1006 2.94E-14 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 syc0198_d c77ce3c7c2f7a457b134e30e753b594b 1165 SMART SM00091 459 525 8.4E-5 T 11-10-2018 IPR000014 PAS domain syc0198_d c77ce3c7c2f7a457b134e30e753b594b 1165 SMART SM00091 688 755 42.0 T 11-10-2018 IPR000014 PAS domain syc0198_d c77ce3c7c2f7a457b134e30e753b594b 1165 SMART SM00091 567 633 3.4E-7 T 11-10-2018 IPR000014 PAS domain syc0198_d c77ce3c7c2f7a457b134e30e753b594b 1165 SMART SM00091 815 881 5.1E-8 T 11-10-2018 IPR000014 PAS domain syc0198_d c77ce3c7c2f7a457b134e30e753b594b 1165 SMART SM00091 146 212 1.9E-5 T 11-10-2018 IPR000014 PAS domain syc0198_d c77ce3c7c2f7a457b134e30e753b594b 1165 Pfam PF08447 PAS fold 711 795 6.2E-7 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 syc0198_d c77ce3c7c2f7a457b134e30e753b594b 1165 Gene3D G3DSA:3.30.450.20 448 556 1.4E-12 T 11-10-2018 syc0198_d c77ce3c7c2f7a457b134e30e753b594b 1165 SMART SM00065 1 142 4.1E-6 T 11-10-2018 IPR003018 GAF domain GO:0005515 syc0198_d c77ce3c7c2f7a457b134e30e753b594b 1165 SMART SM00065 294 448 3.1E-11 T 11-10-2018 IPR003018 GAF domain GO:0005515 syc0198_d c77ce3c7c2f7a457b134e30e753b594b 1165 Gene3D G3DSA:3.30.565.10 1011 1164 3.2E-39 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily syc0198_d c77ce3c7c2f7a457b134e30e753b594b 1165 SMART SM00086 761 803 4.9 T 11-10-2018 IPR001610 PAC motif syc0198_d c77ce3c7c2f7a457b134e30e753b594b 1165 SMART SM00086 217 258 7.1E-4 T 11-10-2018 IPR001610 PAC motif syc0198_d c77ce3c7c2f7a457b134e30e753b594b 1165 SMART SM00086 639 676 14.0 T 11-10-2018 IPR001610 PAC motif syc0198_d c77ce3c7c2f7a457b134e30e753b594b 1165 Pfam PF00512 His Kinase A (phospho-acceptor) domain 941 1005 1.0E-7 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 syc0198_d c77ce3c7c2f7a457b134e30e753b594b 1165 SUPERFAMILY SSF55781 6 145 1.11E-24 T 11-10-2018 syc0198_d c77ce3c7c2f7a457b134e30e753b594b 1165 Pfam PF13185 GAF domain 344 438 1.8E-10 T 11-10-2018 IPR003018 GAF domain GO:0005515 syc0198_d c77ce3c7c2f7a457b134e30e753b594b 1165 Pfam PF13185 GAF domain 3 132 3.1E-15 T 11-10-2018 IPR003018 GAF domain GO:0005515 syc0198_d c77ce3c7c2f7a457b134e30e753b594b 1165 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1048 1160 3.7E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase syc0198_d c77ce3c7c2f7a457b134e30e753b594b 1165 Gene3D G3DSA:3.30.450.40 290 447 1.5E-27 T 11-10-2018 IPR029016 GAF-like domain superfamily syc0198_d c77ce3c7c2f7a457b134e30e753b594b 1165 Gene3D G3DSA:1.10.287.130 917 1005 2.0E-14 T 11-10-2018 syc0198_d c77ce3c7c2f7a457b134e30e753b594b 1165 SUPERFAMILY SSF55785 137 256 1.34E-24 T 11-10-2018 IPR035965 PAS domain superfamily syc0198_d c77ce3c7c2f7a457b134e30e753b594b 1165 SMART SM00387 1048 1161 8.3E-31 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase syc0198_d c77ce3c7c2f7a457b134e30e753b594b 1165 SUPERFAMILY SSF55785 699 806 8.72E-12 T 11-10-2018 IPR035965 PAS domain superfamily syc2225_d 06c9ff9ea81dd6209ed18ebc91c3eba9 1084 Gene3D G3DSA:3.30.70.1430 587 691 5.5E-274 T 11-10-2018 syc2225_d 06c9ff9ea81dd6209ed18ebc91c3eba9 1084 Gene3D G3DSA:1.20.1640.10 528 1042 5.5E-274 T 11-10-2018 syc2225_d 06c9ff9ea81dd6209ed18ebc91c3eba9 1084 SUPERFAMILY SSF82714 191 276 1.96E-7 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains syc2225_d 06c9ff9ea81dd6209ed18ebc91c3eba9 1084 Pfam PF00873 AcrB/AcrD/AcrF family 12 1045 4.3E-287 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 syc2225_d 06c9ff9ea81dd6209ed18ebc91c3eba9 1084 SUPERFAMILY SSF82714 738 823 7.46E-18 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains syc2225_d 06c9ff9ea81dd6209ed18ebc91c3eba9 1084 SUPERFAMILY SSF82866 823 1047 9.94E-48 T 11-10-2018 syc2225_d 06c9ff9ea81dd6209ed18ebc91c3eba9 1084 Gene3D G3DSA:3.30.2090.10 187 282 5.5E-274 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains syc2225_d 06c9ff9ea81dd6209ed18ebc91c3eba9 1084 SUPERFAMILY SSF82693 143 337 2.49E-17 T 11-10-2018 syc2225_d 06c9ff9ea81dd6209ed18ebc91c3eba9 1084 Gene3D G3DSA:3.30.70.1440 692 886 5.5E-274 T 11-10-2018 syc2225_d 06c9ff9ea81dd6209ed18ebc91c3eba9 1084 Gene3D G3DSA:3.30.2090.10 739 827 5.5E-274 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains syc2225_d 06c9ff9ea81dd6209ed18ebc91c3eba9 1084 SUPERFAMILY SSF82693 48 142 8.02E-18 T 11-10-2018 syc2225_d 06c9ff9ea81dd6209ed18ebc91c3eba9 1084 SUPERFAMILY SSF82693 585 670 2.88E-7 T 11-10-2018 syc2225_d 06c9ff9ea81dd6209ed18ebc91c3eba9 1084 SUPERFAMILY SSF82866 302 513 3.01E-33 T 11-10-2018 syc2225_d 06c9ff9ea81dd6209ed18ebc91c3eba9 1084 Gene3D G3DSA:3.30.70.1430 48 835 5.5E-274 T 11-10-2018 syc2225_d 06c9ff9ea81dd6209ed18ebc91c3eba9 1084 Gene3D G3DSA:3.30.70.1320 140 337 5.5E-274 T 11-10-2018 syc2225_d 06c9ff9ea81dd6209ed18ebc91c3eba9 1084 Gene3D G3DSA:1.20.1640.10 19 527 5.5E-274 T 11-10-2018 syc2225_d 06c9ff9ea81dd6209ed18ebc91c3eba9 1084 PRINTS PR00702 Acriflavin resistance protein family signature 46 64 1.7E-18 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 syc2225_d 06c9ff9ea81dd6209ed18ebc91c3eba9 1084 PRINTS PR00702 Acriflavin resistance protein family signature 398 422 1.7E-18 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 syc2225_d 06c9ff9ea81dd6209ed18ebc91c3eba9 1084 PRINTS PR00702 Acriflavin resistance protein family signature 370 391 1.7E-18 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 syc2225_d 06c9ff9ea81dd6209ed18ebc91c3eba9 1084 PRINTS PR00702 Acriflavin resistance protein family signature 18 42 1.7E-18 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 syc2225_d 06c9ff9ea81dd6209ed18ebc91c3eba9 1084 PRINTS PR00702 Acriflavin resistance protein family signature 343 366 1.7E-18 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 syc0565_d 3a1f40ca75048c03b06f55caaffb78c3 167 Pfam PF05163 DinB family 4 161 2.6E-31 T 11-10-2018 IPR007837 DNA damage-inducible protein DinB syc0565_d 3a1f40ca75048c03b06f55caaffb78c3 167 SUPERFAMILY SSF109854 6 149 1.21E-33 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes syc0565_d 3a1f40ca75048c03b06f55caaffb78c3 167 Gene3D G3DSA:1.20.120.450 3 161 2.9E-43 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes syc0337_c 4e5ad69fa275245784e23b244ca43700 138 SUPERFAMILY SSF88723 1 130 1.88E-34 T 11-10-2018 IPR029060 PIN-like domain superfamily syc0337_c 4e5ad69fa275245784e23b244ca43700 138 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 2 129 11.572 T 11-10-2018 IPR022907 VapC family GO:0004540 syc0337_c 4e5ad69fa275245784e23b244ca43700 138 Gene3D G3DSA:3.40.50.1010 1 131 1.1E-37 T 11-10-2018 syc0337_c 4e5ad69fa275245784e23b244ca43700 138 Pfam PF01850 PIN domain 3 123 6.3E-17 T 11-10-2018 IPR002716 PIN domain syc0827_c 7a987115bfb24091601e83c2028ad3ca 406 Pfam PF02481 DNA recombination-mediator protein A 101 310 9.5E-76 T 11-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 syc0827_c 7a987115bfb24091601e83c2028ad3ca 406 Gene3D G3DSA:1.10.10.10 324 403 8.6E-7 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily syc0827_c 7a987115bfb24091601e83c2028ad3ca 406 SUPERFAMILY SSF47781 34 107 3.89E-12 T 11-10-2018 IPR010994 RuvA domain 2-like syc0827_c 7a987115bfb24091601e83c2028ad3ca 406 Gene3D G3DSA:3.40.50.450 15 323 2.6E-97 T 11-10-2018 syc0827_c 7a987115bfb24091601e83c2028ad3ca 406 SUPERFAMILY SSF102405 109 307 4.4E-37 T 11-10-2018 syc0827_c 7a987115bfb24091601e83c2028ad3ca 406 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 99 313 6.1E-79 T 11-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 syc0639_c b6964509345e4829f18b0bca5216b41a 284 SUPERFAMILY SSF53474 6 279 1.4E-53 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold syc0639_c b6964509345e4829f18b0bca5216b41a 284 Pfam PF00561 alpha/beta hydrolase fold 31 134 1.0E-16 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 syc0639_c b6964509345e4829f18b0bca5216b41a 284 PRINTS PR00111 Alpha/beta hydrolase fold signature 56 71 1.2E-5 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 syc0639_c b6964509345e4829f18b0bca5216b41a 284 PRINTS PR00111 Alpha/beta hydrolase fold signature 117 130 1.2E-5 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 syc0639_c b6964509345e4829f18b0bca5216b41a 284 PRINTS PR00412 Epoxide hydrolase signature 117 130 3.4E-12 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 syc0639_c b6964509345e4829f18b0bca5216b41a 284 PRINTS PR00412 Epoxide hydrolase signature 36 54 3.4E-12 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 syc0639_c b6964509345e4829f18b0bca5216b41a 284 PRINTS PR00412 Epoxide hydrolase signature 56 71 3.4E-12 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 syc0639_c b6964509345e4829f18b0bca5216b41a 284 PRINTS PR00412 Epoxide hydrolase signature 255 277 3.4E-12 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 syc0639_c b6964509345e4829f18b0bca5216b41a 284 Gene3D G3DSA:3.40.50.1820 2 280 9.3E-54 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold syc0393_c 003fda15bba100e762ead0a5828fc039 1061 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 407 3.2E-61 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 syc0393_c 003fda15bba100e762ead0a5828fc039 1061 Gene3D G3DSA:3.40.50.300 476 585 1.8E-18 T 11-10-2018 syc0393_c 003fda15bba100e762ead0a5828fc039 1061 Pfam PF13361 UvrD-like helicase C-terminal domain 417 586 1.5E-6 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 syc0393_c 003fda15bba100e762ead0a5828fc039 1061 Gene3D G3DSA:3.90.320.10 934 1059 6.7E-7 T 11-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal syc0393_c 003fda15bba100e762ead0a5828fc039 1061 Pfam PF13361 UvrD-like helicase C-terminal domain 697 790 5.6E-12 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 syc0393_c 003fda15bba100e762ead0a5828fc039 1061 SUPERFAMILY SSF52540 1 794 7.6E-110 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0393_c 003fda15bba100e762ead0a5828fc039 1061 SUPERFAMILY SSF52980 885 1002 6.43E-5 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 syc0393_c 003fda15bba100e762ead0a5828fc039 1061 Pfam PF12705 PD-(D/E)XK nuclease superfamily 850 1056 1.7E-17 T 11-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type syc0393_c 003fda15bba100e762ead0a5828fc039 1061 Gene3D G3DSA:3.40.50.300 303 438 7.8E-35 T 11-10-2018 syc0393_c 003fda15bba100e762ead0a5828fc039 1061 Gene3D G3DSA:3.40.50.300 1 157 4.5E-35 T 11-10-2018 syc0347_d 2c4f107f11d6e19291b5b2d77d178cda 137 SUPERFAMILY SSF88723 3 136 3.36E-19 T 11-10-2018 IPR029060 PIN-like domain superfamily syc0347_d 2c4f107f11d6e19291b5b2d77d178cda 137 Gene3D G3DSA:3.40.50.1010 1 132 1.6E-28 T 11-10-2018 syc0347_d 2c4f107f11d6e19291b5b2d77d178cda 137 Pfam PF01850 PIN domain 4 124 1.2E-7 T 11-10-2018 IPR002716 PIN domain syc0028_d 18c98e78be2850089cf158be2634e860 269 PRINTS PR00783 Major intrinsic protein family signature 61 85 3.1E-20 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 syc0028_d 18c98e78be2850089cf158be2634e860 269 PRINTS PR00783 Major intrinsic protein family signature 98 117 3.1E-20 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 syc0028_d 18c98e78be2850089cf158be2634e860 269 PRINTS PR00783 Major intrinsic protein family signature 178 200 3.1E-20 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 syc0028_d 18c98e78be2850089cf158be2634e860 269 PRINTS PR00783 Major intrinsic protein family signature 215 235 3.1E-20 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 syc0028_d 18c98e78be2850089cf158be2634e860 269 ProSitePatterns PS00221 MIP family signature. 79 87 - T 11-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 syc0028_d 18c98e78be2850089cf158be2634e860 269 SUPERFAMILY SSF81338 3 240 6.28E-42 T 11-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 syc0028_d 18c98e78be2850089cf158be2634e860 269 Gene3D G3DSA:1.20.1080.10 4 240 1.6E-37 T 11-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 syc0028_d 18c98e78be2850089cf158be2634e860 269 Pfam PF00230 Major intrinsic protein 12 232 2.6E-27 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 syc1898_d 44d87a6c6cceefe98b0374488f41b6a5 870 SMART SM00306 756 854 1.7E-14 T 11-10-2018 IPR003587 Hint domain N-terminal Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 syc1898_d 44d87a6c6cceefe98b0374488f41b6a5 870 Gene3D G3DSA:2.170.16.20 753 857 1.9E-37 T 11-10-2018 syc1898_d 44d87a6c6cceefe98b0374488f41b6a5 870 SUPERFAMILY SSF51294 758 843 1.41E-15 T 11-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 syc1898_d 44d87a6c6cceefe98b0374488f41b6a5 870 Pfam PF02811 PHP domain 6 180 1.1E-47 T 11-10-2018 IPR004013 PHP domain GO:0003824 syc1898_d 44d87a6c6cceefe98b0374488f41b6a5 870 SMART SM00481 4 72 6.6E-29 T 11-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal syc1898_d 44d87a6c6cceefe98b0374488f41b6a5 870 Gene3D G3DSA:3.20.20.140 1 280 3.0E-99 T 11-10-2018 syc1898_d 44d87a6c6cceefe98b0374488f41b6a5 870 TIGRFAM TIGR01445 intein_Nterm: intein N-terminal splicing region 758 833 1.5E-12 T 11-10-2018 IPR006141 Intein N-terminal splicing region GO:0016539 Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 syc1898_d 44d87a6c6cceefe98b0374488f41b6a5 870 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 304 738 9.5E-174 T 11-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 syc1898_d 44d87a6c6cceefe98b0374488f41b6a5 870 Gene3D G3DSA:1.10.10.1600 443 520 6.8E-28 T 11-10-2018 syc1898_d 44d87a6c6cceefe98b0374488f41b6a5 870 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 3 759 0.0 T 11-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 syc1898_d 44d87a6c6cceefe98b0374488f41b6a5 870 SUPERFAMILY SSF89550 4 258 3.92E-34 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 syc0172_d 7f536e0a061c90a4af6b85a8735d3202 170 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 64 70 - T 11-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 syc0172_d 7f536e0a061c90a4af6b85a8735d3202 170 SUPERFAMILY SSF50324 7 169 1.57E-62 T 11-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 syc0172_d 7f536e0a061c90a4af6b85a8735d3202 170 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 13 169 35.508 T 11-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 syc0172_d 7f536e0a061c90a4af6b85a8735d3202 170 Pfam PF00719 Inorganic pyrophosphatase 17 169 1.2E-54 T 11-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 syc0172_d 7f536e0a061c90a4af6b85a8735d3202 170 Gene3D G3DSA:3.90.80.10 1 170 4.0E-64 T 11-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 syc2397_d faa415e5fb97701a0b985991379af621 133 Pfam PF00072 Response regulator receiver domain 5 119 6.7E-16 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 syc2397_d faa415e5fb97701a0b985991379af621 133 SUPERFAMILY SSF52172 1 129 3.56E-25 T 11-10-2018 IPR011006 CheY-like superfamily syc2397_d faa415e5fb97701a0b985991379af621 133 SMART SM00448 2 125 2.1E-17 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 syc2397_d faa415e5fb97701a0b985991379af621 133 Gene3D G3DSA:3.40.50.12740 2 133 1.1E-28 T 11-10-2018 syc0241_d e5de74d29e48a00e8939b154d82a28c0 523 Pfam PF00664 ABC transporter transmembrane region 5 182 1.2E-11 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 syc0241_d e5de74d29e48a00e8939b154d82a28c0 523 SMART SM00382 305 494 1.8E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain syc0241_d e5de74d29e48a00e8939b154d82a28c0 523 Gene3D G3DSA:1.20.1560.10 1 260 1.5E-18 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 syc0241_d e5de74d29e48a00e8939b154d82a28c0 523 Pfam PF00005 ABC transporter 296 448 9.4E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 syc0241_d e5de74d29e48a00e8939b154d82a28c0 523 SUPERFAMILY SSF52540 273 516 3.18E-76 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0241_d e5de74d29e48a00e8939b154d82a28c0 523 ProSitePatterns PS00211 ABC transporters family signature. 420 434 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 syc0241_d e5de74d29e48a00e8939b154d82a28c0 523 Gene3D G3DSA:3.40.50.300 271 521 2.9E-80 T 11-10-2018 syc0241_d e5de74d29e48a00e8939b154d82a28c0 523 SUPERFAMILY SSF90123 3 243 2.88E-24 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 syc0846_c 220ac6ec6b0fd1dcb7cb6daa2f9610f9 341 Gene3D G3DSA:1.10.287.70 4 117 1.1E-22 T 11-10-2018 syc0846_c 220ac6ec6b0fd1dcb7cb6daa2f9610f9 341 Pfam PF02080 TrkA-C domain 276 340 3.4E-11 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 syc0846_c 220ac6ec6b0fd1dcb7cb6daa2f9610f9 341 Gene3D G3DSA:3.40.50.720 118 265 2.3E-41 T 11-10-2018 syc0846_c 220ac6ec6b0fd1dcb7cb6daa2f9610f9 341 SUPERFAMILY SSF51735 115 256 1.25E-39 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily syc0846_c 220ac6ec6b0fd1dcb7cb6daa2f9610f9 341 Pfam PF02254 TrkA-N domain 119 234 9.4E-35 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 syc0846_c 220ac6ec6b0fd1dcb7cb6daa2f9610f9 341 Pfam PF07885 Ion channel 22 94 3.3E-17 T 11-10-2018 IPR013099 Potassium channel domain syc0846_c 220ac6ec6b0fd1dcb7cb6daa2f9610f9 341 SUPERFAMILY SSF81324 5 136 1.83E-27 T 11-10-2018 syc0846_c 220ac6ec6b0fd1dcb7cb6daa2f9610f9 341 Gene3D G3DSA:3.30.70.1450 268 341 1.9E-15 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 syc0846_c 220ac6ec6b0fd1dcb7cb6daa2f9610f9 341 SUPERFAMILY SSF116726 263 340 2.09E-15 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 syc0270_d 27c9401457e08ec8d0cfba993b235b57 165 SUPERFAMILY SSF54690 12 150 2.09E-38 T 11-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 syc0270_d 27c9401457e08ec8d0cfba993b235b57 165 Gene3D G3DSA:3.90.1170.40 9 157 5.3E-39 T 11-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 syc0270_d 27c9401457e08ec8d0cfba993b235b57 165 Pfam PF02391 MoaE protein 17 127 2.3E-28 T 11-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 syc2353_c 3169812d7e44e6cdee6c7d1d8caab40f 419 Pfam PF00266 Aminotransferase class-V 30 403 2.0E-145 T 11-10-2018 IPR000192 Aminotransferase class V domain syc2353_c 3169812d7e44e6cdee6c7d1d8caab40f 419 Gene3D G3DSA:3.40.640.10 41 301 1.6E-180 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 syc2353_c 3169812d7e44e6cdee6c7d1d8caab40f 419 SUPERFAMILY SSF53383 12 412 2.09E-128 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase syc2353_c 3169812d7e44e6cdee6c7d1d8caab40f 419 PIRSF PIRSF005572 27 415 1.2E-47 T 11-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 syc2353_c 3169812d7e44e6cdee6c7d1d8caab40f 419 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 12 415 5.8E-182 T 11-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 syc2353_c 3169812d7e44e6cdee6c7d1d8caab40f 419 Gene3D G3DSA:3.90.1150.10 13 407 1.6E-180 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 syc1323_c 504e814cb57d84af7ecc6df8b1ddc538 578 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 25 149 5.4E-18 T 11-10-2018 IPR000014 PAS domain syc1323_c 504e814cb57d84af7ecc6df8b1ddc538 578 SUPERFAMILY SSF141868 327 572 1.7E-56 T 11-10-2018 IPR035919 EAL domain superfamily syc1323_c 504e814cb57d84af7ecc6df8b1ddc538 578 SMART SM00086 100 142 1.3E-12 T 11-10-2018 IPR001610 PAC motif syc1323_c 504e814cb57d84af7ecc6df8b1ddc538 578 Pfam PF00990 Diguanylate cyclase, GGDEF domain 155 304 6.7E-7 T 11-10-2018 IPR000160 GGDEF domain syc1323_c 504e814cb57d84af7ecc6df8b1ddc538 578 Pfam PF13426 PAS domain 39 141 4.8E-21 T 11-10-2018 IPR000014 PAS domain syc1323_c 504e814cb57d84af7ecc6df8b1ddc538 578 SUPERFAMILY SSF55073 159 306 3.61E-11 T 11-10-2018 IPR029787 Nucleotide cyclase syc1323_c 504e814cb57d84af7ecc6df8b1ddc538 578 SMART SM00052 319 565 6.4E-45 T 11-10-2018 IPR001633 EAL domain syc1323_c 504e814cb57d84af7ecc6df8b1ddc538 578 SMART SM00091 25 94 3.7E-5 T 11-10-2018 IPR000014 PAS domain syc1323_c 504e814cb57d84af7ecc6df8b1ddc538 578 Gene3D G3DSA:3.30.70.270 156 317 4.1E-11 T 11-10-2018 syc1323_c 504e814cb57d84af7ecc6df8b1ddc538 578 Pfam PF00563 EAL domain 325 560 1.4E-54 T 11-10-2018 IPR001633 EAL domain syc1323_c 504e814cb57d84af7ecc6df8b1ddc538 578 SUPERFAMILY SSF55785 32 141 2.44E-27 T 11-10-2018 IPR035965 PAS domain superfamily syc1323_c 504e814cb57d84af7ecc6df8b1ddc538 578 Gene3D G3DSA:3.20.20.450 322 572 7.7E-61 T 11-10-2018 IPR035919 EAL domain superfamily syc1323_c 504e814cb57d84af7ecc6df8b1ddc538 578 Gene3D G3DSA:3.30.450.20 19 155 4.6E-42 T 11-10-2018 syc1323_c 504e814cb57d84af7ecc6df8b1ddc538 578 SMART SM00267 142 310 1.2E-5 T 11-10-2018 IPR000160 GGDEF domain syc2486_c 73ff86b83cad52b0534678ab0d23f2c4 546 SUPERFAMILY SSF52283 18 150 7.18E-39 T 11-10-2018 syc2486_c 73ff86b83cad52b0534678ab0d23f2c4 546 SUPERFAMILY SSF51735 116 299 1.52E-57 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily syc2486_c 73ff86b83cad52b0534678ab0d23f2c4 546 TIGRFAM TIGR01327 PGDH: phosphoglycerate dehydrogenase 20 546 4.1E-212 T 11-10-2018 IPR006236 D-3-phosphoglycerate dehydrogenase GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|Reactome: R-HSA-977347 syc2486_c 73ff86b83cad52b0534678ab0d23f2c4 546 SUPERFAMILY SSF55021 464 542 3.16E-16 T 11-10-2018 syc2486_c 73ff86b83cad52b0534678ab0d23f2c4 546 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 159 186 - T 11-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 syc2486_c 73ff86b83cad52b0534678ab0d23f2c4 546 Gene3D G3DSA:3.40.50.720 113 296 2.7E-120 T 11-10-2018 syc2486_c 73ff86b83cad52b0534678ab0d23f2c4 546 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 21 330 1.1E-37 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 syc2486_c 73ff86b83cad52b0534678ab0d23f2c4 546 Pfam PF01842 ACT domain 473 536 4.6E-9 T 11-10-2018 IPR002912 ACT domain syc2486_c 73ff86b83cad52b0534678ab0d23f2c4 546 Gene3D G3DSA:3.40.50.720 22 322 2.7E-120 T 11-10-2018 syc2486_c 73ff86b83cad52b0534678ab0d23f2c4 546 Gene3D G3DSA:3.30.1330.90 336 471 1.4E-33 T 11-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 syc2486_c 73ff86b83cad52b0534678ab0d23f2c4 546 Gene3D G3DSA:3.30.70.260 473 546 1.2E-19 T 11-10-2018 syc2486_c 73ff86b83cad52b0534678ab0d23f2c4 546 SUPERFAMILY SSF143548 336 468 3.4E-34 T 11-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 syc2486_c 73ff86b83cad52b0534678ab0d23f2c4 546 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 122 298 1.2E-62 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 syc2486_c 73ff86b83cad52b0534678ab0d23f2c4 546 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 236 252 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site syc1742_c 3cee9735119838cef32613e96f2bc0a7 289 SUPERFAMILY SSF53681 118 265 3.92E-39 T 11-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 syc1742_c 3cee9735119838cef32613e96f2bc0a7 289 Gene3D G3DSA:3.40.50.1860 15 259 2.9E-89 T 11-10-2018 syc1742_c 3cee9735119838cef32613e96f2bc0a7 289 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 188 198 - T 11-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 syc1742_c 3cee9735119838cef32613e96f2bc0a7 289 Gene3D G3DSA:3.40.50.1860 105 215 2.9E-89 T 11-10-2018 syc1742_c 3cee9735119838cef32613e96f2bc0a7 289 Pfam PF01177 Asp/Glu/Hydantoin racemase 16 222 4.5E-34 T 11-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 syc1742_c 3cee9735119838cef32613e96f2bc0a7 289 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 80 88 - T 11-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 syc1742_c 3cee9735119838cef32613e96f2bc0a7 289 TIGRFAM TIGR00067 glut_race: glutamate racemase 16 261 2.2E-82 T 11-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 syc1742_c 3cee9735119838cef32613e96f2bc0a7 289 SUPERFAMILY SSF53681 15 116 2.22E-36 T 11-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 syc1742_c 3cee9735119838cef32613e96f2bc0a7 289 Hamap MF_00258 Glutamate racemase [murI]. 14 263 37.591 T 11-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 syc2405_c 43f74150b54b5eb47d9d337e012da114 286 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 24 280 3.1E-110 T 11-10-2018 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 syc2405_c 43f74150b54b5eb47d9d337e012da114 286 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 3 278 9.3E-119 T 11-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 syc2405_c 43f74150b54b5eb47d9d337e012da114 286 Gene3D G3DSA:1.10.3720.10 23 282 1.6E-64 T 11-10-2018 IPR035906 MetI-like superfamily syc2405_c 43f74150b54b5eb47d9d337e012da114 286 SUPERFAMILY SSF161098 20 271 2.22E-52 T 11-10-2018 IPR035906 MetI-like superfamily syc2405_c 43f74150b54b5eb47d9d337e012da114 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 279 1.3E-18 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 syc0349_d 78ff28649cb5811e57e0a00467c0d0dc 476 Pfam PF08242 Methyltransferase domain 48 138 3.0E-11 T 11-10-2018 IPR013217 Methyltransferase type 12 syc0349_d 78ff28649cb5811e57e0a00467c0d0dc 476 Pfam PF00535 Glycosyl transferase family 2 240 367 1.6E-18 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 syc0349_d 78ff28649cb5811e57e0a00467c0d0dc 476 SUPERFAMILY SSF53335 2 191 1.03E-22 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase syc0349_d 78ff28649cb5811e57e0a00467c0d0dc 476 SUPERFAMILY SSF53448 239 474 2.04E-46 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases syc0349_d 78ff28649cb5811e57e0a00467c0d0dc 476 Gene3D G3DSA:3.40.50.150 1 193 2.2E-21 T 11-10-2018 syc0349_d 78ff28649cb5811e57e0a00467c0d0dc 476 Gene3D G3DSA:3.90.550.10 225 469 1.0E-35 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases syc0692_d e064e493bb775d93e87243f6694df2ce 1003 ProSitePatterns PS00211 ABC transporters family signature. 545 559 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 syc0692_d e064e493bb775d93e87243f6694df2ce 1003 Gene3D G3DSA:3.40.50.300 673 992 2.0E-140 T 11-10-2018 syc0692_d e064e493bb775d93e87243f6694df2ce 1003 Gene3D G3DSA:3.40.50.300 30 653 5.3E-235 T 11-10-2018 syc0692_d e064e493bb775d93e87243f6694df2ce 1003 Gene3D G3DSA:1.10.8.280 338 453 5.3E-235 T 11-10-2018 syc0692_d e064e493bb775d93e87243f6694df2ce 1003 SMART SM00382 689 962 1.1E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain syc0692_d e064e493bb775d93e87243f6694df2ce 1003 ProSitePatterns PS00211 ABC transporters family signature. 886 900 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 syc0692_d e064e493bb775d93e87243f6694df2ce 1003 Hamap MF_00205 UvrABC system protein A [uvrA]. 25 996 22.404 T 11-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 syc0692_d e064e493bb775d93e87243f6694df2ce 1003 Gene3D G3DSA:1.20.1580.10 114 550 5.3E-235 T 11-10-2018 syc0692_d e064e493bb775d93e87243f6694df2ce 1003 SUPERFAMILY SSF52540 673 966 2.13E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0692_d e064e493bb775d93e87243f6694df2ce 1003 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 27 981 0.0 T 11-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 syc0692_d e064e493bb775d93e87243f6694df2ce 1003 Gene3D G3DSA:3.30.190.20 154 278 5.3E-235 T 11-10-2018 syc0692_d e064e493bb775d93e87243f6694df2ce 1003 SUPERFAMILY SSF52540 28 627 5.46E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0692_d e064e493bb775d93e87243f6694df2ce 1003 Gene3D G3DSA:1.20.1580.10 748 886 2.0E-140 T 11-10-2018 syc1301_c 7e711d1e3912f2a622a4f38dc4f12a9e 491 Gene3D G3DSA:3.40.50.300 3 240 3.6E-54 T 11-10-2018 syc1301_c 7e711d1e3912f2a622a4f38dc4f12a9e 491 SUPERFAMILY SSF52540 1 230 4.91E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc1301_c 7e711d1e3912f2a622a4f38dc4f12a9e 491 Gene3D G3DSA:3.40.50.880 250 431 2.9E-19 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like syc1301_c 7e711d1e3912f2a622a4f38dc4f12a9e 491 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 491 184.443 T 11-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 syc1301_c 7e711d1e3912f2a622a4f38dc4f12a9e 491 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 252 439 1.1E-55 T 11-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 syc1301_c 7e711d1e3912f2a622a4f38dc4f12a9e 491 SUPERFAMILY SSF52317 253 448 1.36E-37 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like syc1301_c 7e711d1e3912f2a622a4f38dc4f12a9e 491 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 4 487 5.2E-200 T 11-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 syc1301_c 7e711d1e3912f2a622a4f38dc4f12a9e 491 Pfam PF13500 AAA domain 3 228 1.1E-21 T 11-10-2018 syc2368_c 3d018ac7fcb61f1c6b4994cf233615a4 516 Gene3D G3DSA:3.50.50.60 215 329 2.1E-18 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc2368_c 3d018ac7fcb61f1c6b4994cf233615a4 516 SUPERFAMILY SSF51905 5 502 1.52E-56 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc2368_c 3d018ac7fcb61f1c6b4994cf233615a4 516 Gene3D G3DSA:3.50.50.60 8 105 7.4E-22 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc2368_c 3d018ac7fcb61f1c6b4994cf233615a4 516 Pfam PF01593 Flavin containing amine oxidoreductase 18 500 2.0E-16 T 11-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 syc1493_c 8c5c26cccec3ccf169c79e5c67a52a86 493 PIRSF PIRSF000485 23 488 2.0E-168 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 syc1493_c 8c5c26cccec3ccf169c79e5c67a52a86 493 Gene3D G3DSA:3.40.50.2020 292 456 5.0E-154 T 11-10-2018 syc1493_c 8c5c26cccec3ccf169c79e5c67a52a86 493 Pfam PF13522 Glutamine amidotransferase domain 86 218 8.3E-15 T 11-10-2018 syc1493_c 8c5c26cccec3ccf169c79e5c67a52a86 493 Gene3D G3DSA:3.60.20.10 27 475 5.0E-154 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal syc1493_c 8c5c26cccec3ccf169c79e5c67a52a86 493 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 26 473 46.437 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 syc1493_c 8c5c26cccec3ccf169c79e5c67a52a86 493 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 27 474 5.1E-161 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 syc1493_c 8c5c26cccec3ccf169c79e5c67a52a86 493 SUPERFAMILY SSF53271 268 482 8.15E-73 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like syc1493_c 8c5c26cccec3ccf169c79e5c67a52a86 493 SUPERFAMILY SSF56235 27 274 7.03E-64 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal syc1493_c 8c5c26cccec3ccf169c79e5c67a52a86 493 Pfam PF00156 Phosphoribosyl transferase domain 296 402 4.2E-9 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 syc0038_d e513a687ea3f7bb8b13899ef43c8ef63 559 SMART SM00631 9 367 2.8E-30 T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 syc0038_d e513a687ea3f7bb8b13899ef43c8ef63 559 Pfam PF00246 Zinc carboxypeptidase 16 360 1.8E-58 T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 syc0038_d e513a687ea3f7bb8b13899ef43c8ef63 559 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 263 276 6.9E-13 T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 syc0038_d e513a687ea3f7bb8b13899ef43c8ef63 559 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 216 224 6.9E-13 T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 syc0038_d e513a687ea3f7bb8b13899ef43c8ef63 559 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 35 47 6.9E-13 T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 syc0038_d e513a687ea3f7bb8b13899ef43c8ef63 559 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 61 75 6.9E-13 T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 syc0038_d e513a687ea3f7bb8b13899ef43c8ef63 559 SUPERFAMILY SSF53187 3 347 7.86E-60 T 11-10-2018 syc0762_c 03bc67e03cc54ed44a88980f25fe477f 295 SUPERFAMILY SSF53474 12 277 3.99E-52 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold syc0762_c 03bc67e03cc54ed44a88980f25fe477f 295 Gene3D G3DSA:3.40.50.1820 9 282 1.7E-53 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold syc0762_c 03bc67e03cc54ed44a88980f25fe477f 295 Pfam PF12697 Alpha/beta hydrolase family 27 272 4.2E-23 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 syc1507_c 6226b7acb32c165b31f379ed3d39b00d 541 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 27 523 7.1E-215 T 11-10-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 syc1507_c 6226b7acb32c165b31f379ed3d39b00d 541 Gene3D G3DSA:1.20.210.10 13 531 6.5E-212 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 syc1507_c 6226b7acb32c165b31f379ed3d39b00d 541 SUPERFAMILY SSF81442 25 528 5.36E-187 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 syc1507_c 6226b7acb32c165b31f379ed3d39b00d 541 PRINTS PR01165 Cytochrome c oxidase subunit I signature 320 341 6.8E-110 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 syc1507_c 6226b7acb32c165b31f379ed3d39b00d 541 PRINTS PR01165 Cytochrome c oxidase subunit I signature 24 49 6.8E-110 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 syc1507_c 6226b7acb32c165b31f379ed3d39b00d 541 PRINTS PR01165 Cytochrome c oxidase subunit I signature 71 94 6.8E-110 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 syc1507_c 6226b7acb32c165b31f379ed3d39b00d 541 PRINTS PR01165 Cytochrome c oxidase subunit I signature 140 152 6.8E-110 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 syc1507_c 6226b7acb32c165b31f379ed3d39b00d 541 PRINTS PR01165 Cytochrome c oxidase subunit I signature 99 123 6.8E-110 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 syc1507_c 6226b7acb32c165b31f379ed3d39b00d 541 PRINTS PR01165 Cytochrome c oxidase subunit I signature 250 271 6.8E-110 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 syc1507_c 6226b7acb32c165b31f379ed3d39b00d 541 PRINTS PR01165 Cytochrome c oxidase subunit I signature 383 402 6.8E-110 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 syc1507_c 6226b7acb32c165b31f379ed3d39b00d 541 PRINTS PR01165 Cytochrome c oxidase subunit I signature 199 218 6.8E-110 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 syc1507_c 6226b7acb32c165b31f379ed3d39b00d 541 PRINTS PR01165 Cytochrome c oxidase subunit I signature 355 373 6.8E-110 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 syc1507_c 6226b7acb32c165b31f379ed3d39b00d 541 PRINTS PR01165 Cytochrome c oxidase subunit I signature 296 311 6.8E-110 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 syc1507_c 6226b7acb32c165b31f379ed3d39b00d 541 PRINTS PR01165 Cytochrome c oxidase subunit I signature 170 188 6.8E-110 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 syc1507_c 6226b7acb32c165b31f379ed3d39b00d 541 PRINTS PR01165 Cytochrome c oxidase subunit I signature 433 454 6.8E-110 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 syc1507_c 6226b7acb32c165b31f379ed3d39b00d 541 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 252 306 - T 11-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 syc1507_c 6226b7acb32c165b31f379ed3d39b00d 541 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 34 475 6.5E-157 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 syc0354_c 9765375e53b0ee33615a0c0042a000de 78 Pfam PF11347 Protein of unknown function (DUF3148) 5 66 8.7E-30 T 11-10-2018 IPR021495 Protein of unknown function DUF3148 syc0730_d 4f39c3cecc04844ef386648f8ab29886 709 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 469 668 4.3E-23 T 11-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 syc0730_d 4f39c3cecc04844ef386648f8ab29886 709 Gene3D G3DSA:3.40.50.2000 28 437 9.0E-135 T 11-10-2018 syc0730_d 4f39c3cecc04844ef386648f8ab29886 709 SUPERFAMILY SSF53756 27 443 2.12E-66 T 11-10-2018 syc0730_d 4f39c3cecc04844ef386648f8ab29886 709 TIGRFAM TIGR02471 sucr_syn_bact_C: sucrose-phosphate synthase, sucrose phosphatase-like domain 470 704 9.3E-92 T 11-10-2018 IPR012821 Sucrose phosphate synthase, sucrose phosphatase-like domain syc0730_d 4f39c3cecc04844ef386648f8ab29886 709 Gene3D G3DSA:3.90.1070.10 555 624 1.6E-71 T 11-10-2018 syc0730_d 4f39c3cecc04844ef386648f8ab29886 709 Gene3D G3DSA:3.40.50.2000 223 431 9.0E-135 T 11-10-2018 syc0730_d 4f39c3cecc04844ef386648f8ab29886 709 SUPERFAMILY SSF56784 465 702 1.02E-31 T 11-10-2018 IPR036412 HAD-like superfamily syc0730_d 4f39c3cecc04844ef386648f8ab29886 709 Gene3D G3DSA:3.40.50.1000 469 701 1.6E-71 T 11-10-2018 IPR023214 HAD superfamily syc0730_d 4f39c3cecc04844ef386648f8ab29886 709 Pfam PF00534 Glycosyl transferases group 1 249 422 5.3E-22 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 syc0730_d 4f39c3cecc04844ef386648f8ab29886 709 TIGRFAM TIGR02472 sucr_P_syn_N: sucrose-phosphate synthase, putative, glycosyltransferase domain 6 442 7.1E-196 T 11-10-2018 IPR012822 Sucrose-phosphate synthase, glycosyltransferase domain syc0730_d 4f39c3cecc04844ef386648f8ab29886 709 Pfam PF05116 Sucrose-6F-phosphate phosphohydrolase 467 704 7.1E-90 T 11-10-2018 IPR006380 Sucrose-phosphatase-like, N-terminal syc0730_d 4f39c3cecc04844ef386648f8ab29886 709 Pfam PF13439 Glycosyltransferase Family 4 31 227 2.5E-14 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 syc0601_d b1364f4be55c35b4a336df29619aa23d 569 SMART SM00382 349 517 2.7E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain syc0601_d b1364f4be55c35b4a336df29619aa23d 569 SMART SM00382 26 234 3.9E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain syc0601_d b1364f4be55c35b4a336df29619aa23d 569 SUPERFAMILY SSF52540 305 527 3.56E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0601_d b1364f4be55c35b4a336df29619aa23d 569 Gene3D G3DSA:3.40.50.300 1 284 2.4E-70 T 11-10-2018 syc0601_d b1364f4be55c35b4a336df29619aa23d 569 Pfam PF00005 ABC transporter 345 472 4.3E-22 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 syc0601_d b1364f4be55c35b4a336df29619aa23d 569 SUPERFAMILY SSF52540 2 243 2.45E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0601_d b1364f4be55c35b4a336df29619aa23d 569 ProSitePatterns PS00211 ABC transporters family signature. 444 458 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 syc0601_d b1364f4be55c35b4a336df29619aa23d 569 Gene3D G3DSA:3.40.50.300 286 561 1.4E-58 T 11-10-2018 syc0601_d b1364f4be55c35b4a336df29619aa23d 569 Pfam PF12848 ABC transporter 228 307 8.2E-27 T 11-10-2018 IPR032781 ABC-transporter extension domain syc0601_d b1364f4be55c35b4a336df29619aa23d 569 Pfam PF00005 ABC transporter 17 189 7.4E-24 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 syc0601_d b1364f4be55c35b4a336df29619aa23d 569 ProSitePatterns PS00211 ABC transporters family signature. 161 175 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 syc1767_d 0855df42dadf200dcd8cd5438a7a93ab 302 SUPERFAMILY SSF56655 4 295 1.68E-94 T 11-10-2018 syc1767_d 0855df42dadf200dcd8cd5438a7a93ab 302 PIRSF PIRSF500210 1 301 2.1E-111 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 syc1767_d 0855df42dadf200dcd8cd5438a7a93ab 302 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 1 299 36.546 T 11-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 syc1767_d 0855df42dadf200dcd8cd5438a7a93ab 302 Gene3D G3DSA:3.40.190.80 171 301 5.1E-52 T 11-10-2018 syc1767_d 0855df42dadf200dcd8cd5438a7a93ab 302 Gene3D G3DSA:3.30.540.10 1 170 2.3E-57 T 11-10-2018 syc1767_d 0855df42dadf200dcd8cd5438a7a93ab 302 PIRSF PIRSF000904 1 301 4.9E-110 T 11-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 syc1767_d 0855df42dadf200dcd8cd5438a7a93ab 302 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 239 251 - T 11-10-2018 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 syc1767_d 0855df42dadf200dcd8cd5438a7a93ab 302 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 122 145 4.4E-52 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 syc1767_d 0855df42dadf200dcd8cd5438a7a93ab 302 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 153 176 4.4E-52 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 syc1767_d 0855df42dadf200dcd8cd5438a7a93ab 302 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 179 206 4.4E-52 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 syc1767_d 0855df42dadf200dcd8cd5438a7a93ab 302 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 40 66 4.4E-52 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 syc1767_d 0855df42dadf200dcd8cd5438a7a93ab 302 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 2 29 4.4E-52 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 syc1767_d 0855df42dadf200dcd8cd5438a7a93ab 302 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 273 298 4.4E-52 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 syc1767_d 0855df42dadf200dcd8cd5438a7a93ab 302 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 2 167 2.2E-48 T 11-10-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 syc0173_c 5d2011b3e86689f819adb9b9159ffeb2 712 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 285 446 8.3E-49 T 11-10-2018 IPR000160 GGDEF domain syc0173_c 5d2011b3e86689f819adb9b9159ffeb2 712 SMART SM00091 164 231 1.1E-10 T 11-10-2018 IPR000014 PAS domain syc0173_c 5d2011b3e86689f819adb9b9159ffeb2 712 Gene3D G3DSA:3.30.450.20 163 286 7.0E-24 T 11-10-2018 syc0173_c 5d2011b3e86689f819adb9b9159ffeb2 712 SMART SM00052 459 703 1.0E-81 T 11-10-2018 IPR001633 EAL domain syc0173_c 5d2011b3e86689f819adb9b9159ffeb2 712 SUPERFAMILY SSF55073 294 450 2.75E-51 T 11-10-2018 IPR029787 Nucleotide cyclase syc0173_c 5d2011b3e86689f819adb9b9159ffeb2 712 Pfam PF00990 Diguanylate cyclase, GGDEF domain 289 444 3.4E-51 T 11-10-2018 IPR000160 GGDEF domain syc0173_c 5d2011b3e86689f819adb9b9159ffeb2 712 SMART SM00267 278 449 1.2E-66 T 11-10-2018 IPR000160 GGDEF domain syc0173_c 5d2011b3e86689f819adb9b9159ffeb2 712 SUPERFAMILY SSF141868 464 710 1.96E-69 T 11-10-2018 IPR035919 EAL domain superfamily syc0173_c 5d2011b3e86689f819adb9b9159ffeb2 712 Pfam PF00563 EAL domain 467 695 1.5E-58 T 11-10-2018 IPR001633 EAL domain syc0173_c 5d2011b3e86689f819adb9b9159ffeb2 712 Gene3D G3DSA:3.20.20.450 460 711 2.4E-77 T 11-10-2018 IPR035919 EAL domain superfamily syc0173_c 5d2011b3e86689f819adb9b9159ffeb2 712 SUPERFAMILY SSF55785 151 276 6.46E-23 T 11-10-2018 IPR035965 PAS domain superfamily syc0173_c 5d2011b3e86689f819adb9b9159ffeb2 712 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 167 285 2.4E-20 T 11-10-2018 IPR000014 PAS domain syc0173_c 5d2011b3e86689f819adb9b9159ffeb2 712 Gene3D G3DSA:3.30.70.270 287 452 9.0E-58 T 11-10-2018 syc0173_c 5d2011b3e86689f819adb9b9159ffeb2 712 Pfam PF00989 PAS fold 167 275 1.2E-14 T 11-10-2018 IPR013767 PAS fold GO:0006355 syc0531_d ff7832d23139552192710de06733eb8c 839 Gene3D G3DSA:1.25.40.10 11 95 3.9E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc0531_d ff7832d23139552192710de06733eb8c 839 SMART SM00304 503 554 6.3E-4 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 syc0531_d ff7832d23139552192710de06733eb8c 839 SMART SM00304 437 489 6.9E-5 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 syc0531_d ff7832d23139552192710de06733eb8c 839 Pfam PF14559 Tetratricopeptide repeat 22 77 1.7E-5 T 11-10-2018 syc0531_d ff7832d23139552192710de06733eb8c 839 SUPERFAMILY SSF58104 531 834 2.75E-63 T 11-10-2018 syc0531_d ff7832d23139552192710de06733eb8c 839 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 616 799 1.5E-39 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 syc0531_d ff7832d23139552192710de06733eb8c 839 SMART SM00283 569 830 3.5E-80 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 syc0531_d ff7832d23139552192710de06733eb8c 839 SUPERFAMILY SSF158472 443 485 2.75E-5 T 11-10-2018 syc0531_d ff7832d23139552192710de06733eb8c 839 Gene3D G3DSA:1.20.1480.50 400 496 4.0E-5 T 11-10-2018 syc0531_d ff7832d23139552192710de06733eb8c 839 Gene3D G3DSA:1.10.287.950 502 832 5.0E-62 T 11-10-2018 syc0531_d ff7832d23139552192710de06733eb8c 839 SUPERFAMILY SSF48452 16 75 3.13E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc0266_c a6ec4c9806ab4aab78b1940cc36c3f44 610 SUPERFAMILY SSF51120 408 543 2.62E-15 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal syc0266_c a6ec4c9806ab4aab78b1940cc36c3f44 610 Gene3D G3DSA:2.150.10.10 416 546 5.4E-16 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal syc0266_c a6ec4c9806ab4aab78b1940cc36c3f44 610 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 421 435 9.7 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 syc0266_c a6ec4c9806ab4aab78b1940cc36c3f44 610 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 335 349 26.0 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 syc0266_c a6ec4c9806ab4aab78b1940cc36c3f44 610 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 319 330 1.2 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 syc0266_c a6ec4c9806ab4aab78b1940cc36c3f44 610 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 439 455 3.7 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 syc0266_c a6ec4c9806ab4aab78b1940cc36c3f44 610 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 374 384 20.0 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 syc0266_c a6ec4c9806ab4aab78b1940cc36c3f44 610 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 296 312 0.026 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 syc0266_c a6ec4c9806ab4aab78b1940cc36c3f44 610 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 389 402 0.44 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 syc0266_c a6ec4c9806ab4aab78b1940cc36c3f44 610 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 233 249 0.4 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 syc0266_c a6ec4c9806ab4aab78b1940cc36c3f44 610 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 277 294 0.0055 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 syc0266_c a6ec4c9806ab4aab78b1940cc36c3f44 610 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 456 473 0.044 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 syc0266_c a6ec4c9806ab4aab78b1940cc36c3f44 610 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 360 369 50.0 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 syc0266_c a6ec4c9806ab4aab78b1940cc36c3f44 610 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 260 276 12.0 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 syc0266_c a6ec4c9806ab4aab78b1940cc36c3f44 610 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 283 301 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site syc0266_c a6ec4c9806ab4aab78b1940cc36c3f44 610 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 453 471 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site syc0266_c a6ec4c9806ab4aab78b1940cc36c3f44 610 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 274 292 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site syc0266_c a6ec4c9806ab4aab78b1940cc36c3f44 610 SUPERFAMILY SSF51120 180 291 2.62E-12 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal syc0266_c a6ec4c9806ab4aab78b1940cc36c3f44 610 Gene3D G3DSA:2.150.10.10 204 254 1.7E-6 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal syc0266_c a6ec4c9806ab4aab78b1940cc36c3f44 610 PRINTS PR00313 NodO calcium binding signature 323 331 8.9E-11 T 11-10-2018 syc0266_c a6ec4c9806ab4aab78b1940cc36c3f44 610 PRINTS PR00313 NodO calcium binding signature 293 304 8.9E-11 T 11-10-2018 syc0266_c a6ec4c9806ab4aab78b1940cc36c3f44 610 PRINTS PR00313 NodO calcium binding signature 466 475 8.9E-11 T 11-10-2018 syc0266_c a6ec4c9806ab4aab78b1940cc36c3f44 610 PRINTS PR00313 NodO calcium binding signature 395 403 8.9E-11 T 11-10-2018 syc0266_c a6ec4c9806ab4aab78b1940cc36c3f44 610 SUPERFAMILY SSF51120 254 403 3.4E-16 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal syc0266_c a6ec4c9806ab4aab78b1940cc36c3f44 610 Gene3D G3DSA:2.150.10.10 255 318 2.6E-10 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal syc0266_c a6ec4c9806ab4aab78b1940cc36c3f44 610 Gene3D G3DSA:2.150.10.10 337 415 3.0E-5 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal syc1792_d f190ad1c37eebf320fc580c5fd14577b 426 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 5 348 5.6E-65 T 11-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 syc1792_d f190ad1c37eebf320fc580c5fd14577b 426 Gene3D G3DSA:3.40.640.10 49 292 1.2E-148 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 syc1792_d f190ad1c37eebf320fc580c5fd14577b 426 SUPERFAMILY SSF53383 3 406 1.21E-110 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase syc1792_d f190ad1c37eebf320fc580c5fd14577b 426 Gene3D G3DSA:3.90.1150.170 4 397 1.2E-148 T 11-10-2018 syc1508_c 60de9524c2da843e41ffc66297bef1b8 315 SUPERFAMILY SSF81464 15 116 1.36E-18 T 11-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 syc1508_c 60de9524c2da843e41ffc66297bef1b8 315 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 194 260 3.2E-13 T 11-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 syc1508_c 60de9524c2da843e41ffc66297bef1b8 315 PRINTS PR01166 Cytochrome c oxidase subunit II signature 97 117 1.5E-9 T 11-10-2018 syc1508_c 60de9524c2da843e41ffc66297bef1b8 315 PRINTS PR01166 Cytochrome c oxidase subunit II signature 85 97 1.5E-9 T 11-10-2018 syc1508_c 60de9524c2da843e41ffc66297bef1b8 315 PRINTS PR01166 Cytochrome c oxidase subunit II signature 248 265 1.5E-9 T 11-10-2018 syc1508_c 60de9524c2da843e41ffc66297bef1b8 315 PRINTS PR01166 Cytochrome c oxidase subunit II signature 210 230 1.5E-9 T 11-10-2018 syc1508_c 60de9524c2da843e41ffc66297bef1b8 315 Gene3D G3DSA:1.10.287.90 30 115 1.8E-20 T 11-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 syc1508_c 60de9524c2da843e41ffc66297bef1b8 315 SUPERFAMILY SSF49503 167 287 9.49E-42 T 11-10-2018 IPR008972 Cupredoxin syc1508_c 60de9524c2da843e41ffc66297bef1b8 315 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 20 111 6.9E-20 T 11-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 syc1508_c 60de9524c2da843e41ffc66297bef1b8 315 Gene3D G3DSA:2.60.40.2600 166 304 4.0E-45 T 11-10-2018 syc1508_c 60de9524c2da843e41ffc66297bef1b8 315 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 211 259 - T 11-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 syc0613_c a6b961a63185bc92f14a3a3ff2991dfa 284 Gene3D G3DSA:3.30.230.20 5 128 1.2E-38 T 11-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 syc0613_c a6b961a63185bc92f14a3a3ff2991dfa 284 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 8 275 1.9E-96 T 11-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 syc0613_c a6b961a63185bc92f14a3a3ff2991dfa 284 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 7 277 1.7E-93 T 11-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 syc0613_c a6b961a63185bc92f14a3a3ff2991dfa 284 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 5 279 37.919 T 11-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 syc0613_c a6b961a63185bc92f14a3a3ff2991dfa 284 SUPERFAMILY SSF54211 136 276 6.75E-45 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold syc0613_c a6b961a63185bc92f14a3a3ff2991dfa 284 SUPERFAMILY SSF54211 7 124 2.5E-32 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold syc0613_c a6b961a63185bc92f14a3a3ff2991dfa 284 Gene3D G3DSA:3.30.1700.10 133 283 4.5E-51 T 11-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 syc0356_c eb40b9c6012d18342ed9ecbcc9549899 265 SUPERFAMILY SSF63892 28 262 2.09E-96 T 11-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 syc0356_c eb40b9c6012d18342ed9ecbcc9549899 265 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 29 260 8.1E-100 T 11-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 syc0356_c eb40b9c6012d18342ed9ecbcc9549899 265 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 29 261 1.2E-93 T 11-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 syc0356_c eb40b9c6012d18342ed9ecbcc9549899 265 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 27 265 119.86 T 11-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 syc0356_c eb40b9c6012d18342ed9ecbcc9549899 265 Gene3D G3DSA:3.20.20.70 20 264 4.4E-101 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 syc0442_d df72bac097005bee5da6ebdc717cefe2 266 SMART SM00028 175 208 0.41 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc0442_d df72bac097005bee5da6ebdc717cefe2 266 SMART SM00028 141 174 1.3 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc0442_d df72bac097005bee5da6ebdc717cefe2 266 Gene3D G3DSA:1.25.40.10 145 233 2.3E-13 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc0442_d df72bac097005bee5da6ebdc717cefe2 266 Gene3D G3DSA:2.160.20.80 19 144 1.7E-26 T 11-10-2018 syc0442_d df72bac097005bee5da6ebdc717cefe2 266 Pfam PF00805 Pentapeptide repeats (8 copies) 51 85 3.7E-12 T 11-10-2018 IPR001646 Pentapeptide repeat syc0442_d df72bac097005bee5da6ebdc717cefe2 266 SUPERFAMILY SSF141571 39 136 6.93E-25 T 11-10-2018 syc0442_d df72bac097005bee5da6ebdc717cefe2 266 SUPERFAMILY SSF48452 142 206 3.52E-13 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc1193_c 9e3a3e46e53b1f9e9e6fef91986900cc 332 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 257 4.8E-56 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 syc1193_c 9e3a3e46e53b1f9e9e6fef91986900cc 332 SUPERFAMILY SSF51735 4 326 2.11E-96 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily syc1193_c 9e3a3e46e53b1f9e9e6fef91986900cc 332 Gene3D G3DSA:3.40.50.720 6 257 2.0E-127 T 11-10-2018 syc1193_c 9e3a3e46e53b1f9e9e6fef91986900cc 332 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 6 329 9.8E-137 T 11-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 syc1193_c 9e3a3e46e53b1f9e9e6fef91986900cc 332 Gene3D G3DSA:3.90.25.10 178 311 2.0E-127 T 11-10-2018 syc0203_c c310a537b67fbc6d873868a8d3fb3d04 656 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 29 654 0.0 T 11-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 syc0203_c c310a537b67fbc6d873868a8d3fb3d04 656 Gene3D G3DSA:3.40.50.12780 65 527 1.4E-113 T 11-10-2018 syc0203_c c310a537b67fbc6d873868a8d3fb3d04 656 Gene3D G3DSA:3.30.300.30 530 655 8.2E-31 T 11-10-2018 syc0203_c c310a537b67fbc6d873868a8d3fb3d04 656 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 11 656 53.473 T 11-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 syc0203_c c310a537b67fbc6d873868a8d3fb3d04 656 Pfam PF00501 AMP-binding enzyme 98 534 1.4E-99 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 syc0203_c c310a537b67fbc6d873868a8d3fb3d04 656 Pfam PF13193 AMP-binding enzyme C-terminal domain 543 621 3.2E-28 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain syc0203_c c310a537b67fbc6d873868a8d3fb3d04 656 SUPERFAMILY SSF56801 17 652 1.83E-185 T 11-10-2018 syc0203_c c310a537b67fbc6d873868a8d3fb3d04 656 ProSitePatterns PS00455 Putative AMP-binding domain signature. 268 279 - T 11-10-2018 IPR020845 AMP-binding, conserved site syc0203_c c310a537b67fbc6d873868a8d3fb3d04 656 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 33 88 1.7E-22 T 11-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 syc1890_d 4af395827ca138b6824f60f90d22fce4 294 SUPERFAMILY SSF55120 14 272 3.02E-80 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 syc1890_d 4af395827ca138b6824f60f90d22fce4 294 Gene3D G3DSA:3.30.70.580 11 117 2.9E-34 T 11-10-2018 syc1890_d 4af395827ca138b6824f60f90d22fce4 294 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 14 257 31.544 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 syc1890_d 4af395827ca138b6824f60f90d22fce4 294 Gene3D G3DSA:3.30.70.660 118 256 1.9E-35 T 11-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 syc1890_d 4af395827ca138b6824f60f90d22fce4 294 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 15 252 3.1E-64 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 syc1890_d 4af395827ca138b6824f60f90d22fce4 294 PIRSF PIRSF001430 13 265 1.5E-72 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 syc1890_d 4af395827ca138b6824f60f90d22fce4 294 Pfam PF01416 tRNA pseudouridine synthase 20 115 8.6E-9 T 11-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 syc1890_d 4af395827ca138b6824f60f90d22fce4 294 Pfam PF01416 tRNA pseudouridine synthase 156 258 5.0E-17 T 11-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 syc0263_d 1bcd010e99e8b234eac5d1b24e231abe 56 Gene3D G3DSA:2.30.170.10 2 56 3.0E-25 T 11-10-2018 syc0263_d 1bcd010e99e8b234eac5d1b24e231abe 56 SUPERFAMILY SSF57868 5 56 3.77E-18 T 11-10-2018 IPR017854 Metallothionein domain superfamily GO:0046872 syc0263_d 1bcd010e99e8b234eac5d1b24e231abe 56 PRINTS PR00859 Prokaryote metallothionein signature 20 36 6.0E-28 T 11-10-2018 IPR000518 Metallothionein, family 14, prokaryote GO:0046872 syc0263_d 1bcd010e99e8b234eac5d1b24e231abe 56 PRINTS PR00859 Prokaryote metallothionein signature 2 18 6.0E-28 T 11-10-2018 IPR000518 Metallothionein, family 14, prokaryote GO:0046872 syc0263_d 1bcd010e99e8b234eac5d1b24e231abe 56 PRINTS PR00859 Prokaryote metallothionein signature 37 53 6.0E-28 T 11-10-2018 IPR000518 Metallothionein, family 14, prokaryote GO:0046872 syc0263_d 1bcd010e99e8b234eac5d1b24e231abe 56 ProDom PD019076 METALLOTHIONEIN METALLOTHIONEIN ZINC METAL-BINDING CADMIUM CLUSTER MT METAL-THIOLATE COPPER SMTA 2 54 7.0E-24 T 11-10-2018 IPR000518 Metallothionein, family 14, prokaryote GO:0046872 syc0263_d 1bcd010e99e8b234eac5d1b24e231abe 56 Pfam PF02069 Prokaryotic metallothionein 4 54 3.7E-21 T 11-10-2018 IPR000518 Metallothionein, family 14, prokaryote GO:0046872 syc2481_c e9d8595711abdbd7ac253636601926e7 175 Gene3D G3DSA:1.25.40.10 3 135 3.2E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc2481_c e9d8595711abdbd7ac253636601926e7 175 Pfam PF14559 Tetratricopeptide repeat 19 77 9.5E-6 T 11-10-2018 syc2481_c e9d8595711abdbd7ac253636601926e7 175 SUPERFAMILY SSF48452 12 91 2.32E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc0179_c f5e603f7772aacb5da8a10f148982cac 764 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 48 754 8.7E-260 T 11-10-2018 IPR004811 RelA/SpoT family GO:0015969 syc0179_c f5e603f7772aacb5da8a10f148982cac 764 Pfam PF13291 ACT domain 679 755 9.4E-14 T 11-10-2018 IPR002912 ACT domain syc0179_c f5e603f7772aacb5da8a10f148982cac 764 Gene3D G3DSA:3.10.20.30 406 480 5.3E-32 T 11-10-2018 IPR012675 Beta-grasp domain superfamily syc0179_c f5e603f7772aacb5da8a10f148982cac 764 Pfam PF13328 HD domain 48 197 4.3E-53 T 11-10-2018 IPR003607 HD/PDEase domain syc0179_c f5e603f7772aacb5da8a10f148982cac 764 Pfam PF04607 Region found in RelA / SpoT proteins 258 367 3.0E-37 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 syc0179_c f5e603f7772aacb5da8a10f148982cac 764 SMART SM00471 63 175 2.0E-11 T 11-10-2018 IPR003607 HD/PDEase domain syc0179_c f5e603f7772aacb5da8a10f148982cac 764 Gene3D G3DSA:3.30.70.260 679 762 2.1E-14 T 11-10-2018 syc0179_c f5e603f7772aacb5da8a10f148982cac 764 SUPERFAMILY SSF109604 39 212 2.98E-73 T 11-10-2018 syc0179_c f5e603f7772aacb5da8a10f148982cac 764 SMART SM00954 258 368 3.1E-65 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 syc0179_c f5e603f7772aacb5da8a10f148982cac 764 Gene3D G3DSA:1.10.3210.10 23 213 4.1E-82 T 11-10-2018 syc0179_c f5e603f7772aacb5da8a10f148982cac 764 SUPERFAMILY SSF55021 678 756 2.41E-11 T 11-10-2018 syc0179_c f5e603f7772aacb5da8a10f148982cac 764 SUPERFAMILY SSF81271 400 472 7.85E-22 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 syc0179_c f5e603f7772aacb5da8a10f148982cac 764 Gene3D G3DSA:3.30.460.10 214 347 2.1E-47 T 11-10-2018 syc0179_c f5e603f7772aacb5da8a10f148982cac 764 SUPERFAMILY SSF81301 215 390 1.08E-62 T 11-10-2018 syc0179_c f5e603f7772aacb5da8a10f148982cac 764 Pfam PF02824 TGS domain 413 472 2.9E-21 T 11-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 syc1904_d 7c396c2e4dd25588f98a981bb4d93e1a 560 SMART SM00065 40 215 2.1E-17 T 11-10-2018 IPR003018 GAF domain GO:0005515 syc1904_d 7c396c2e4dd25588f98a981bb4d93e1a 560 Pfam PF13487 HD domain 430 495 2.1E-17 T 11-10-2018 syc1904_d 7c396c2e4dd25588f98a981bb4d93e1a 560 SUPERFAMILY SSF55781 24 216 3.93E-29 T 11-10-2018 syc1904_d 7c396c2e4dd25588f98a981bb4d93e1a 560 SUPERFAMILY SSF109604 222 305 2.86E-9 T 11-10-2018 syc1904_d 7c396c2e4dd25588f98a981bb4d93e1a 560 Pfam PF01590 GAF domain 40 205 4.6E-13 T 11-10-2018 IPR003018 GAF domain GO:0005515 syc1904_d 7c396c2e4dd25588f98a981bb4d93e1a 560 Gene3D G3DSA:1.10.3210.10 214 331 5.8E-20 T 11-10-2018 syc1904_d 7c396c2e4dd25588f98a981bb4d93e1a 560 Gene3D G3DSA:1.10.3210.10 420 552 9.9E-31 T 11-10-2018 syc1904_d 7c396c2e4dd25588f98a981bb4d93e1a 560 Gene3D G3DSA:3.30.450.40 16 213 2.9E-40 T 11-10-2018 IPR029016 GAF-like domain superfamily syc1904_d 7c396c2e4dd25588f98a981bb4d93e1a 560 SMART SM00471 232 513 1.2E-4 T 11-10-2018 IPR003607 HD/PDEase domain syc1904_d 7c396c2e4dd25588f98a981bb4d93e1a 560 SUPERFAMILY SSF109604 428 542 1.92E-12 T 11-10-2018 syc2344_d 91a75a9a612fd5c2b0eeca367727e4c4 394 Gene3D G3DSA:3.20.20.100 1 265 4.9E-42 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily syc2344_d 91a75a9a612fd5c2b0eeca367727e4c4 394 SUPERFAMILY SSF51430 1 328 4.19E-52 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily syc2344_d 91a75a9a612fd5c2b0eeca367727e4c4 394 PRINTS PR00069 Aldo-keto reductase signature 104 122 1.6E-5 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 syc2344_d 91a75a9a612fd5c2b0eeca367727e4c4 394 PRINTS PR00069 Aldo-keto reductase signature 141 158 1.6E-5 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 syc2344_d 91a75a9a612fd5c2b0eeca367727e4c4 394 PRINTS PR00069 Aldo-keto reductase signature 50 74 1.6E-5 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 syc2344_d 91a75a9a612fd5c2b0eeca367727e4c4 394 Pfam PF00248 Aldo/keto reductase family 38 191 5.2E-22 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain syc1801_c baa6aa3cabeaf5f92ecd764791359eb2 102 SMART SM01387 21 101 1.4E-43 T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc1801_c baa6aa3cabeaf5f92ecd764791359eb2 102 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 16 102 20.97 T 11-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc1801_c baa6aa3cabeaf5f92ecd764791359eb2 102 Pfam PF00312 Ribosomal protein S15 21 101 2.5E-32 T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc1801_c baa6aa3cabeaf5f92ecd764791359eb2 102 Gene3D G3DSA:1.10.287.10 14 102 2.6E-31 T 11-10-2018 syc1801_c baa6aa3cabeaf5f92ecd764791359eb2 102 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 18 101 5.9E-34 T 11-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc1801_c baa6aa3cabeaf5f92ecd764791359eb2 102 ProSitePatterns PS00362 Ribosomal protein S15 signature. 52 82 - T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc1801_c baa6aa3cabeaf5f92ecd764791359eb2 102 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 23 102 3.0E-40 T 11-10-2018 syc1801_c baa6aa3cabeaf5f92ecd764791359eb2 102 SUPERFAMILY SSF47060 16 101 7.95E-32 T 11-10-2018 IPR009068 S15/NS1, RNA-binding syc0199_d e86208cbd198ae0c89aea9a89ba0938d 151 SMART SM00448 6 131 1.1E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 syc0199_d e86208cbd198ae0c89aea9a89ba0938d 151 Gene3D G3DSA:3.40.50.2300 2 149 7.7E-32 T 11-10-2018 syc0199_d e86208cbd198ae0c89aea9a89ba0938d 151 SUPERFAMILY SSF52172 4 139 8.82E-30 T 11-10-2018 IPR011006 CheY-like superfamily syc0199_d e86208cbd198ae0c89aea9a89ba0938d 151 Pfam PF00072 Response regulator receiver domain 8 131 1.8E-17 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 syc1540_d 863ffdae80922a4eb73c50dd96d459ab 402 Gene3D G3DSA:1.10.240.10 227 328 3.4E-25 T 11-10-2018 syc1540_d 863ffdae80922a4eb73c50dd96d459ab 402 SUPERFAMILY SSF55174 299 401 7.33E-14 T 11-10-2018 syc1540_d 863ffdae80922a4eb73c50dd96d459ab 402 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 1 402 42.443 T 11-10-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 syc1540_d 863ffdae80922a4eb73c50dd96d459ab 402 Gene3D G3DSA:3.40.50.620 7 226 5.1E-65 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold syc1540_d 863ffdae80922a4eb73c50dd96d459ab 402 SUPERFAMILY SSF52374 33 313 1.54E-80 T 11-10-2018 syc1540_d 863ffdae80922a4eb73c50dd96d459ab 402 Gene3D G3DSA:3.10.290.10 329 402 9.3E-15 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 syc1540_d 863ffdae80922a4eb73c50dd96d459ab 402 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 7 400 2.5E-119 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 syc1540_d 863ffdae80922a4eb73c50dd96d459ab 402 Pfam PF01479 S4 domain 343 378 2.9E-7 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc1540_d 863ffdae80922a4eb73c50dd96d459ab 402 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 170 185 1.1E-24 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 syc1540_d 863ffdae80922a4eb73c50dd96d459ab 402 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 187 209 1.1E-24 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 syc1540_d 863ffdae80922a4eb73c50dd96d459ab 402 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 220 232 1.1E-24 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 syc1540_d 863ffdae80922a4eb73c50dd96d459ab 402 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 52 74 1.1E-24 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 syc1540_d 863ffdae80922a4eb73c50dd96d459ab 402 Pfam PF00579 tRNA synthetases class I (W and Y) 37 316 2.3E-69 T 11-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 syc0098_d efe8514f4aff1418314ea34aca838586 206 Gene3D G3DSA:3.30.420.40 4 196 2.3E-31 T 11-10-2018 syc0098_d efe8514f4aff1418314ea34aca838586 206 Pfam PF00814 Glycoprotease family 51 125 2.6E-14 T 11-10-2018 IPR000905 Gcp-like domain syc0098_d efe8514f4aff1418314ea34aca838586 206 SUPERFAMILY SSF53067 3 101 2.91E-21 T 11-10-2018 syc0098_d efe8514f4aff1418314ea34aca838586 206 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 4 196 3.4E-39 T 11-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 syc0098_d efe8514f4aff1418314ea34aca838586 206 Gene3D G3DSA:3.30.420.40 93 167 2.3E-31 T 11-10-2018 syc0098_d efe8514f4aff1418314ea34aca838586 206 SUPERFAMILY SSF53067 109 196 9.71E-6 T 11-10-2018 syc1738_c 79fea6688901199520469bf623c92ef7 556 PRINTS PR00315 GTP-binding elongation factor signature 154 163 8.7E-12 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 syc1738_c 79fea6688901199520469bf623c92ef7 556 PRINTS PR00315 GTP-binding elongation factor signature 102 112 8.7E-12 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 syc1738_c 79fea6688901199520469bf623c92ef7 556 PRINTS PR00315 GTP-binding elongation factor signature 82 90 8.7E-12 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 syc1738_c 79fea6688901199520469bf623c92ef7 556 PRINTS PR00315 GTP-binding elongation factor signature 118 129 8.7E-12 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 syc1738_c 79fea6688901199520469bf623c92ef7 556 PRINTS PR00315 GTP-binding elongation factor signature 32 45 8.7E-12 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 syc1738_c 79fea6688901199520469bf623c92ef7 556 Gene3D G3DSA:3.30.70.3280 407 547 3.3E-47 T 11-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily syc1738_c 79fea6688901199520469bf623c92ef7 556 Pfam PF16658 Class II release factor RF3, C-terminal domain 404 532 1.5E-43 T 11-10-2018 IPR032090 Peptide chain release factor 3, C-terminal syc1738_c 79fea6688901199520469bf623c92ef7 556 SUPERFAMILY SSF50447 278 407 7.83E-24 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily syc1738_c 79fea6688901199520469bf623c92ef7 556 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 30 170 9.7E-25 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 syc1738_c 79fea6688901199520469bf623c92ef7 556 Pfam PF00009 Elongation factor Tu GTP binding domain 29 292 2.3E-51 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 syc1738_c 79fea6688901199520469bf623c92ef7 556 Gene3D G3DSA:3.40.50.300 127 292 4.2E-104 T 11-10-2018 syc1738_c 79fea6688901199520469bf623c92ef7 556 SUPERFAMILY SSF54980 410 484 1.04E-12 T 11-10-2018 IPR035647 EF-G domain III/V-like syc1738_c 79fea6688901199520469bf623c92ef7 556 Gene3D G3DSA:3.40.50.300 89 396 4.2E-104 T 11-10-2018 syc1738_c 79fea6688901199520469bf623c92ef7 556 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 24 544 1.1E-244 T 11-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 syc1738_c 79fea6688901199520469bf623c92ef7 556 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 75 90 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site syc1738_c 79fea6688901199520469bf623c92ef7 556 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 21 545 50.773 T 11-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 syc1738_c 79fea6688901199520469bf623c92ef7 556 SUPERFAMILY SSF52540 28 293 1.7E-86 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0444_d f77884606afc63ef8e6cd9aaf92a78d7 361 Gene3D G3DSA:3.30.300.130 1 91 2.5E-21 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily syc0444_d f77884606afc63ef8e6cd9aaf92a78d7 361 Gene3D G3DSA:3.40.50.300 92 343 3.7E-80 T 11-10-2018 syc0444_d f77884606afc63ef8e6cd9aaf92a78d7 361 Hamap MF_02040 Iron-sulfur cluster carrier protein. 92 345 37.961 T 11-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein syc0444_d f77884606afc63ef8e6cd9aaf92a78d7 361 ProSitePatterns PS01215 Mrp family signature. 207 223 - T 11-10-2018 IPR000808 Mrp, conserved site GO:0005524 syc0444_d f77884606afc63ef8e6cd9aaf92a78d7 361 SUPERFAMILY SSF117916 1 92 1.47E-24 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily syc0444_d f77884606afc63ef8e6cd9aaf92a78d7 361 Pfam PF01883 Iron-sulfur cluster assembly protein 6 78 1.7E-23 T 11-10-2018 IPR002744 MIP18 family-like syc0444_d f77884606afc63ef8e6cd9aaf92a78d7 361 SUPERFAMILY SSF52540 99 347 2.05E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0444_d f77884606afc63ef8e6cd9aaf92a78d7 361 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 97 344 4.3E-97 T 11-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 syc0597_d eaec96b641c57288bbade12fabb12d21 337 Pfam PF04055 Radical SAM superfamily 36 173 6.3E-10 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 syc0597_d eaec96b641c57288bbade12fabb12d21 337 TIGRFAM TIGR04167 rSAM_SeCys: radical SAM/Cys-rich domain protein 25 336 5.0E-129 T 11-10-2018 IPR026351 Radical SAM/Cys-rich domain protein syc0597_d eaec96b641c57288bbade12fabb12d21 337 Pfam PF12345 Protein of unknown function (DUF3641) 197 335 1.3E-53 T 11-10-2018 IPR024521 Domain of unknown function DUF3641 syc0597_d eaec96b641c57288bbade12fabb12d21 337 Gene3D G3DSA:3.20.20.70 25 297 2.1E-22 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 syc0597_d eaec96b641c57288bbade12fabb12d21 337 Pfam PF13353 4Fe-4S single cluster domain 39 119 8.0E-7 T 11-10-2018 syc0597_d eaec96b641c57288bbade12fabb12d21 337 SUPERFAMILY SSF102114 27 333 1.83E-32 T 11-10-2018 syc0624_c 393c95e11f6e88533d54c6ca203ebbe3 649 Pfam PF00501 AMP-binding enzyme 38 518 6.7E-97 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 syc0624_c 393c95e11f6e88533d54c6ca203ebbe3 649 SUPERFAMILY SSF56801 29 646 1.57E-110 T 11-10-2018 syc0624_c 393c95e11f6e88533d54c6ca203ebbe3 649 Gene3D G3DSA:3.40.50.12780 18 339 2.9E-49 T 11-10-2018 syc0624_c 393c95e11f6e88533d54c6ca203ebbe3 649 ProSitePatterns PS00455 Putative AMP-binding domain signature. 207 218 - T 11-10-2018 IPR020845 AMP-binding, conserved site syc0624_c 393c95e11f6e88533d54c6ca203ebbe3 649 Gene3D G3DSA:3.40.50.12780 350 514 2.0E-40 T 11-10-2018 syc1988_d 7c2fb639ae3171b462557e643900e8de 289 Pfam PF00005 ABC transporter 48 189 1.0E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 syc1988_d 7c2fb639ae3171b462557e643900e8de 289 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 syc1988_d 7c2fb639ae3171b462557e643900e8de 289 Gene3D G3DSA:3.40.50.300 34 281 7.6E-63 T 11-10-2018 syc1988_d 7c2fb639ae3171b462557e643900e8de 289 SUPERFAMILY SSF52540 43 249 4.23E-69 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc1988_d 7c2fb639ae3171b462557e643900e8de 289 SMART SM00382 57 239 3.7E-19 T 11-10-2018 IPR003593 AAA+ ATPase domain syc1988_d 7c2fb639ae3171b462557e643900e8de 289 TIGRFAM TIGR01184 ntrCD: nitrate ABC transporter, ATP-binding proteins C and D 48 270 2.4E-97 T 11-10-2018 IPR005890 Nitrate transport ATP-binding subunit C/D GO:0015112|GO:0015706|GO:0016020 syc2345_d 27d2a5019fee2a8b907a92629da86062 320 PRINTS PR00046 Major sigma-70 factor signature 113 126 3.3E-19 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 syc2345_d 27d2a5019fee2a8b907a92629da86062 320 PRINTS PR00046 Major sigma-70 factor signature 260 272 3.3E-19 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 syc2345_d 27d2a5019fee2a8b907a92629da86062 320 PRINTS PR00046 Major sigma-70 factor signature 296 307 3.3E-19 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 syc2345_d 27d2a5019fee2a8b907a92629da86062 320 PRINTS PR00046 Major sigma-70 factor signature 137 145 3.3E-19 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 syc2345_d 27d2a5019fee2a8b907a92629da86062 320 PRINTS PR00046 Major sigma-70 factor signature 281 296 3.3E-19 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 syc2345_d 27d2a5019fee2a8b907a92629da86062 320 Gene3D G3DSA:1.10.10.10 238 319 1.8E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily syc2345_d 27d2a5019fee2a8b907a92629da86062 320 SUPERFAMILY SSF88659 162 236 7.85E-19 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like syc2345_d 27d2a5019fee2a8b907a92629da86062 320 SUPERFAMILY SSF88659 220 311 3.36E-23 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like syc2345_d 27d2a5019fee2a8b907a92629da86062 320 TIGRFAM TIGR02997 Sig70-cyanoRpoD: RNA polymerase sigma factor, cyanobacterial RpoD-like family 11 308 7.2E-139 T 11-10-2018 IPR017848 RNA polymerase sigma factor, RpoD-like, cyanobacteria syc2345_d 27d2a5019fee2a8b907a92629da86062 320 SUPERFAMILY SSF88946 8 159 2.67E-55 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 syc2345_d 27d2a5019fee2a8b907a92629da86062 320 Pfam PF04542 Sigma-70 region 2 89 159 1.0E-21 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 syc2345_d 27d2a5019fee2a8b907a92629da86062 320 Pfam PF04545 Sigma-70, region 4 256 309 8.4E-17 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 syc2345_d 27d2a5019fee2a8b907a92629da86062 320 Pfam PF00140 Sigma-70 factor, region 1.2 11 41 2.7E-10 T 11-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 syc2345_d 27d2a5019fee2a8b907a92629da86062 320 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 85 309 7.0E-38 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 syc2345_d 27d2a5019fee2a8b907a92629da86062 320 Gene3D G3DSA:1.10.10.10 162 237 9.3E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily syc2345_d 27d2a5019fee2a8b907a92629da86062 320 Pfam PF04539 Sigma-70 region 3 168 243 5.4E-28 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 syc2345_d 27d2a5019fee2a8b907a92629da86062 320 Gene3D G3DSA:1.20.120.1810 7 158 4.5E-50 T 11-10-2018 syc1944_c f0122682b76940f5eefc9def4e3d80f7 340 SMART SM00382 29 218 1.0E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain syc1944_c f0122682b76940f5eefc9def4e3d80f7 340 SUPERFAMILY SSF52540 5 225 4.61E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc1944_c f0122682b76940f5eefc9def4e3d80f7 340 Pfam PF00005 ABC transporter 21 163 1.2E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 syc1944_c f0122682b76940f5eefc9def4e3d80f7 340 Pfam PF13732 Domain of unknown function (DUF4162) 217 312 2.8E-6 T 11-10-2018 IPR025302 Domain of unknown function DUF4162 syc1944_c f0122682b76940f5eefc9def4e3d80f7 340 Gene3D G3DSA:3.40.50.300 2 238 3.9E-69 T 11-10-2018 syc2285_d e598342fdf16bd2e829ff27b7d29ab21 247 Gene3D G3DSA:3.30.420.40 83 245 2.2E-45 T 11-10-2018 syc2285_d e598342fdf16bd2e829ff27b7d29ab21 247 Hamap MF_01274 Type III pantothenate kinase [coaX]. 2 243 18.817 T 11-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 syc2285_d e598342fdf16bd2e829ff27b7d29ab21 247 Pfam PF03309 Type III pantothenate kinase 4 193 1.1E-35 T 11-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 syc2285_d e598342fdf16bd2e829ff27b7d29ab21 247 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 4 239 3.0E-36 T 11-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 syc2285_d e598342fdf16bd2e829ff27b7d29ab21 247 SUPERFAMILY SSF53067 112 239 2.59E-29 T 11-10-2018 syc2285_d e598342fdf16bd2e829ff27b7d29ab21 247 SUPERFAMILY SSF53067 4 105 2.01E-5 T 11-10-2018 syc0642_c 7488b9db36bc395a2d9fcd749a55a17b 130 SUPERFAMILY SSF52833 20 124 7.16E-26 T 11-10-2018 IPR036249 Thioredoxin-like superfamily syc0642_c 7488b9db36bc395a2d9fcd749a55a17b 130 Gene3D G3DSA:3.40.30.10 19 127 2.9E-28 T 11-10-2018 syc1772_d 64fadd388a029a90e9c2451ead3ea22d 407 Gene3D G3DSA:3.90.226.10 198 371 1.2E-123 T 11-10-2018 syc1772_d 64fadd388a029a90e9c2451ead3ea22d 407 Gene3D G3DSA:2.30.42.10 110 197 1.2E-123 T 11-10-2018 syc1772_d 64fadd388a029a90e9c2451ead3ea22d 407 Gene3D G3DSA:3.30.750.44 37 349 1.2E-123 T 11-10-2018 syc1772_d 64fadd388a029a90e9c2451ead3ea22d 407 SUPERFAMILY SSF52096 29 378 3.31E-72 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily syc1772_d 64fadd388a029a90e9c2451ead3ea22d 407 SMART SM00245 183 374 9.5E-86 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 syc1772_d 64fadd388a029a90e9c2451ead3ea22d 407 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 60 377 1.9E-110 T 11-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 syc1772_d 64fadd388a029a90e9c2451ead3ea22d 407 SUPERFAMILY SSF50156 82 202 2.73E-21 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 syc1772_d 64fadd388a029a90e9c2451ead3ea22d 407 Pfam PF03572 Peptidase family S41 213 373 2.4E-52 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 syc1772_d 64fadd388a029a90e9c2451ead3ea22d 407 SMART SM00228 110 183 2.6E-14 T 11-10-2018 IPR001478 PDZ domain GO:0005515 syc1772_d 64fadd388a029a90e9c2451ead3ea22d 407 Pfam PF13180 PDZ domain 114 190 2.0E-13 T 11-10-2018 IPR001478 PDZ domain GO:0005515 syc1027_c 261afec4abfaa0f5737a8e073eac4ac2 509 TIGRFAM TIGR03708 poly_P_AMP_trns: polyphosphate:AMP phosphotransferase 17 509 8.1E-228 T 11-10-2018 IPR022489 Polyphosphate:AMP phosphotransferase GO:0006797|GO:0043751 syc1027_c 261afec4abfaa0f5737a8e073eac4ac2 509 SUPERFAMILY SSF52540 315 504 1.01E-27 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc1027_c 261afec4abfaa0f5737a8e073eac4ac2 509 Gene3D G3DSA:3.40.50.300 5 252 1.3E-79 T 11-10-2018 syc1027_c 261afec4abfaa0f5737a8e073eac4ac2 509 Gene3D G3DSA:3.40.50.300 255 509 1.5E-102 T 11-10-2018 syc1027_c 261afec4abfaa0f5737a8e073eac4ac2 509 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 286 507 2.1E-91 T 11-10-2018 IPR022488 Polyphosphate kinase-2-related syc1027_c 261afec4abfaa0f5737a8e073eac4ac2 509 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 26 248 8.5E-56 T 11-10-2018 IPR022488 Polyphosphate kinase-2-related syc1027_c 261afec4abfaa0f5737a8e073eac4ac2 509 SUPERFAMILY SSF52540 55 233 8.49E-16 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0297_c ecde6e8ec4b29ca98348d809e616d58f 131 SUPERFAMILY SSF51206 10 123 1.44E-23 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like syc0297_c ecde6e8ec4b29ca98348d809e616d58f 131 Gene3D G3DSA:2.60.120.10 5 125 3.7E-26 T 11-10-2018 IPR014710 RmlC-like jelly roll fold syc0297_c ecde6e8ec4b29ca98348d809e616d58f 131 SMART SM00100 1 115 6.0E-21 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain syc0297_c ecde6e8ec4b29ca98348d809e616d58f 131 Pfam PF00027 Cyclic nucleotide-binding domain 22 101 5.7E-17 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain syc1763_c 035f30dee171b36ba3271218fa0c495d 453 Pfam PF01926 50S ribosome-binding GTPase 6 121 2.1E-25 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 syc1763_c 035f30dee171b36ba3271218fa0c495d 453 Pfam PF01926 50S ribosome-binding GTPase 180 297 9.6E-27 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 syc1763_c 035f30dee171b36ba3271218fa0c495d 453 SUPERFAMILY SSF52540 140 439 2.22E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc1763_c 035f30dee171b36ba3271218fa0c495d 453 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 250 268 3.5E-6 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 syc1763_c 035f30dee171b36ba3271218fa0c495d 453 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 180 200 3.5E-6 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 syc1763_c 035f30dee171b36ba3271218fa0c495d 453 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 4 436 4.9E-167 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 syc1763_c 035f30dee171b36ba3271218fa0c495d 453 Hamap MF_00195 GTPase Der [der]. 3 439 39.078 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 syc1763_c 035f30dee171b36ba3271218fa0c495d 453 SUPERFAMILY SSF52540 4 168 1.81E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc1763_c 035f30dee171b36ba3271218fa0c495d 453 SMART SM00382 176 321 0.31 T 11-10-2018 IPR003593 AAA+ ATPase domain syc1763_c 035f30dee171b36ba3271218fa0c495d 453 SMART SM00382 2 168 0.49 T 11-10-2018 IPR003593 AAA+ ATPase domain syc1763_c 035f30dee171b36ba3271218fa0c495d 453 Gene3D G3DSA:3.40.50.300 3 164 4.6E-43 T 11-10-2018 syc1763_c 035f30dee171b36ba3271218fa0c495d 453 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 126 5.7E-19 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 syc1763_c 035f30dee171b36ba3271218fa0c495d 453 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 176 346 1.0E-26 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 syc1763_c 035f30dee171b36ba3271218fa0c495d 453 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 355 436 1.9E-30 T 11-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like syc1763_c 035f30dee171b36ba3271218fa0c495d 453 Gene3D G3DSA:3.30.300.20 355 439 5.0E-30 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta syc1763_c 035f30dee171b36ba3271218fa0c495d 453 Gene3D G3DSA:3.40.50.300 173 354 3.6E-52 T 11-10-2018 syc1763_c 035f30dee171b36ba3271218fa0c495d 453 PIRSF PIRSF006485 2 444 1.7E-166 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 syc1314_d 675f028fc5e0cd3e77d0eac8024061ec 417 Gene3D G3DSA:1.20.1250.20 5 385 1.9E-22 T 11-10-2018 syc1314_d 675f028fc5e0cd3e77d0eac8024061ec 417 TIGRFAM TIGR00788 fbt: folate/biopterin transporter 1 412 2.3E-153 T 11-10-2018 IPR004324 Folate-biopterin transporter GO:0016021 syc1314_d 675f028fc5e0cd3e77d0eac8024061ec 417 SUPERFAMILY SSF103473 10 377 9.16E-28 T 11-10-2018 IPR036259 MFS transporter superfamily syc1314_d 675f028fc5e0cd3e77d0eac8024061ec 417 Pfam PF03092 BT1 family 2 171 8.4E-56 T 11-10-2018 IPR039309 Biopterin transporter family syc1314_d 675f028fc5e0cd3e77d0eac8024061ec 417 Pfam PF03092 BT1 family 183 395 2.0E-64 T 11-10-2018 IPR039309 Biopterin transporter family syc0414_c fb3aaa7260f60b2e920db5b8cb2d5410 865 Pfam PF01433 Peptidase family M1 domain 228 456 6.2E-54 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 syc0414_c fb3aaa7260f60b2e920db5b8cb2d5410 865 Gene3D G3DSA:1.10.390.60 223 461 5.1E-59 T 11-10-2018 syc0414_c fb3aaa7260f60b2e920db5b8cb2d5410 865 SUPERFAMILY SSF55486 224 467 4.39E-67 T 11-10-2018 syc0414_c fb3aaa7260f60b2e920db5b8cb2d5410 865 Pfam PF13646 HEAT repeats 593 678 6.7E-14 T 11-10-2018 syc0414_c fb3aaa7260f60b2e920db5b8cb2d5410 865 Pfam PF13646 HEAT repeats 744 818 5.5E-7 T 11-10-2018 syc0414_c fb3aaa7260f60b2e920db5b8cb2d5410 865 SMART SM00567 E-Z type HEAT repeats 572 601 0.013 T 11-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 syc0414_c fb3aaa7260f60b2e920db5b8cb2d5410 865 SMART SM00567 E-Z type HEAT repeats 635 664 59.0 T 11-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 syc0414_c fb3aaa7260f60b2e920db5b8cb2d5410 865 SMART SM00567 E-Z type HEAT repeats 744 776 680.0 T 11-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 syc0414_c fb3aaa7260f60b2e920db5b8cb2d5410 865 SMART SM00567 E-Z type HEAT repeats 782 811 110.0 T 11-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 syc0414_c fb3aaa7260f60b2e920db5b8cb2d5410 865 SMART SM00567 E-Z type HEAT repeats 604 633 0.0026 T 11-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 syc0414_c fb3aaa7260f60b2e920db5b8cb2d5410 865 SMART SM00567 E-Z type HEAT repeats 711 741 160.0 T 11-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 syc0414_c fb3aaa7260f60b2e920db5b8cb2d5410 865 Gene3D G3DSA:1.25.10.10 664 860 1.0E-8 T 11-10-2018 IPR011989 Armadillo-like helical syc0414_c fb3aaa7260f60b2e920db5b8cb2d5410 865 SUPERFAMILY SSF63737 25 218 8.11E-50 T 11-10-2018 syc0414_c fb3aaa7260f60b2e920db5b8cb2d5410 865 Gene3D G3DSA:2.60.40.1730 36 217 9.0E-39 T 11-10-2018 syc0414_c fb3aaa7260f60b2e920db5b8cb2d5410 865 SUPERFAMILY SSF48371 562 826 4.5E-17 T 11-10-2018 IPR016024 Armadillo-type fold syc0414_c fb3aaa7260f60b2e920db5b8cb2d5410 865 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 330 342 5.1E-14 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 syc0414_c fb3aaa7260f60b2e920db5b8cb2d5410 865 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 201 216 5.1E-14 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 syc0414_c fb3aaa7260f60b2e920db5b8cb2d5410 865 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 154 169 5.1E-14 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 syc0414_c fb3aaa7260f60b2e920db5b8cb2d5410 865 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 278 288 5.1E-14 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 syc0414_c fb3aaa7260f60b2e920db5b8cb2d5410 865 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 311 326 5.1E-14 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 syc0414_c fb3aaa7260f60b2e920db5b8cb2d5410 865 Gene3D G3DSA:1.25.10.110 553 648 9.6E-16 T 11-10-2018 syc0843_c abd4603ed8ae3108beb875bb23d639cd 386 TIGRFAM TIGR00423 TIGR00423: radical SAM domain protein, CofH subfamily 56 376 3.4E-116 T 11-10-2018 IPR020050 FO synthase, subunit 2 GO:0016765 KEGG: 00680+2.5.1.77 syc0843_c abd4603ed8ae3108beb875bb23d639cd 386 Hamap MF_01612 FO synthase subunit 2 [cofH]. 7 379 51.934 T 11-10-2018 IPR019940 CofH family GO:0016765 KEGG: 00680+2.5.1.77 syc0843_c abd4603ed8ae3108beb875bb23d639cd 386 PIRSF PIRSF004762 1 385 2.4E-107 T 11-10-2018 syc0843_c abd4603ed8ae3108beb875bb23d639cd 386 Gene3D G3DSA:3.20.20.70 2 378 4.5E-44 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 syc0843_c abd4603ed8ae3108beb875bb23d639cd 386 SUPERFAMILY SSF102114 22 371 5.49E-43 T 11-10-2018 syc0843_c abd4603ed8ae3108beb875bb23d639cd 386 TIGRFAM TIGR03551 F420_cofH: 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit 25 378 1.4E-115 T 11-10-2018 IPR019940 CofH family GO:0016765 KEGG: 00680+2.5.1.77 syc0373_d 795ca07121dbbe30c037df66f87ef7f4 83 Gene3D G3DSA:1.20.5.860 3 83 4.4E-45 T 11-10-2018 IPR037025 Photosystem II cytochrome b559, alpha subunit superfamily GO:0009523|GO:0009767|GO:0015979|GO:0019684|GO:0020037 syc0373_d 795ca07121dbbe30c037df66f87ef7f4 83 PIRSF PIRSF000036 1 83 2.7E-49 T 11-10-2018 IPR006217 Photosystem II cytochrome b559, alpha subunit GO:0009523|GO:0009767|GO:0015979|GO:0019684|GO:0020037 syc0373_d 795ca07121dbbe30c037df66f87ef7f4 83 Pfam PF00284 Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit 43 80 1.3E-24 T 11-10-2018 IPR013082 Photosystem II cytochrome b559, alpha subunit, lumenal region GO:0009523|GO:0015979|GO:0016021|GO:0046872 syc0373_d 795ca07121dbbe30c037df66f87ef7f4 83 Pfam PF00283 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits 7 35 2.1E-16 T 11-10-2018 IPR013081 Photosystem II cytochrome b559, N-terminal GO:0015979 syc0373_d 795ca07121dbbe30c037df66f87ef7f4 83 Hamap MF_00642 Cytochrome b559 subunit alpha [psbE]. 1 82 32.897 T 11-10-2018 IPR006217 Photosystem II cytochrome b559, alpha subunit GO:0009523|GO:0009767|GO:0015979|GO:0019684|GO:0020037 syc0373_d 795ca07121dbbe30c037df66f87ef7f4 83 TIGRFAM TIGR01332 cyt_b559_alpha: cytochrome b559, alpha subunit 3 81 4.4E-50 T 11-10-2018 IPR006217 Photosystem II cytochrome b559, alpha subunit GO:0009523|GO:0009767|GO:0015979|GO:0019684|GO:0020037 syc0373_d 795ca07121dbbe30c037df66f87ef7f4 83 SUPERFAMILY SSF161045 4 81 1.22E-41 T 11-10-2018 syc0373_d 795ca07121dbbe30c037df66f87ef7f4 83 ProSitePatterns PS00537 Cytochrome b559 subunits heme-binding site signature. 15 29 - T 11-10-2018 IPR006216 Photosystem II cytochrome b559, conserved site GO:0009523|GO:0009539|GO:0009767|GO:0015979|GO:0016021|GO:0019684|GO:0020037 syc1269_d ea285f1ea1d54770ab24655d9288282b 844 SUPERFAMILY SSF53756 30 839 0.0 T 11-10-2018 syc1269_d ea285f1ea1d54770ab24655d9288282b 844 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 678 690 - T 11-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 syc1269_d ea285f1ea1d54770ab24655d9288282b 844 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 34 833 0.0 T 11-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 syc1269_d ea285f1ea1d54770ab24655d9288282b 844 PIRSF PIRSF000460 21 844 4.2E-236 T 11-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 syc1269_d ea285f1ea1d54770ab24655d9288282b 844 Gene3D G3DSA:3.40.50.2000 46 835 0.0 T 11-10-2018 syc1269_d ea285f1ea1d54770ab24655d9288282b 844 Pfam PF00343 Carbohydrate phosphorylase 121 833 0.0 T 11-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 syc1269_d ea285f1ea1d54770ab24655d9288282b 844 Gene3D G3DSA:3.40.50.2000 492 818 0.0 T 11-10-2018 syc0110_c d0b1b7727ccca38646e277ffd39e4285 272 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 11-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 syc0110_c d0b1b7727ccca38646e277ffd39e4285 272 SMART SM00947 27 195 2.4E-64 T 11-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 syc0110_c d0b1b7727ccca38646e277ffd39e4285 272 Gene3D G3DSA:3.40.1050.10 1 201 1.3E-77 T 11-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 syc0110_c d0b1b7727ccca38646e277ffd39e4285 272 Pfam PF00484 Carbonic anhydrase 35 191 1.1E-48 T 11-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 syc0110_c d0b1b7727ccca38646e277ffd39e4285 272 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 39 46 - T 11-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 syc0110_c d0b1b7727ccca38646e277ffd39e4285 272 SUPERFAMILY SSF53056 2 202 8.11E-65 T 11-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 syc0024_d fc48111ad6168b994f64c3f68923cb19 731 SUPERFAMILY SSF56024 371 543 1.79E-54 T 11-10-2018 syc0024_d fc48111ad6168b994f64c3f68923cb19 731 SUPERFAMILY SSF140356 27 130 5.62E-40 T 11-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 syc0024_d fc48111ad6168b994f64c3f68923cb19 731 SUPERFAMILY SSF143724 133 341 4.32E-65 T 11-10-2018 syc0024_d fc48111ad6168b994f64c3f68923cb19 731 Hamap MF_00347 Polyphosphate kinase [ppk]. 27 729 29.941 T 11-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 syc0024_d fc48111ad6168b994f64c3f68923cb19 731 Pfam PF13090 Polyphosphate kinase C-terminal domain 376 724 1.2E-160 T 11-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 syc0024_d fc48111ad6168b994f64c3f68923cb19 731 Pfam PF13089 Polyphosphate kinase N-terminal domain 30 135 3.4E-39 T 11-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 syc0024_d fc48111ad6168b994f64c3f68923cb19 731 SUPERFAMILY SSF56024 547 727 6.8E-73 T 11-10-2018 syc0024_d fc48111ad6168b994f64c3f68923cb19 731 Pfam PF02503 Polyphosphate kinase middle domain 145 350 3.6E-68 T 11-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 syc0024_d fc48111ad6168b994f64c3f68923cb19 731 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 30 725 7.1E-263 T 11-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 syc0024_d fc48111ad6168b994f64c3f68923cb19 731 Gene3D G3DSA:3.30.870.10 547 730 2.4E-70 T 11-10-2018 syc0024_d fc48111ad6168b994f64c3f68923cb19 731 Gene3D G3DSA:3.30.870.10 364 546 1.0E-74 T 11-10-2018 syc0024_d fc48111ad6168b994f64c3f68923cb19 731 Gene3D G3DSA:3.30.1840.10 23 342 2.0E-115 T 11-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 syc0024_d fc48111ad6168b994f64c3f68923cb19 731 PIRSF PIRSF015589 11 731 5.6E-294 T 11-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 syc0632_c 8fb89a5f58c92fdbdedceb9a30d46a4e 142 Gene3D G3DSA:1.25.40.10 3 127 3.5E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc0632_c 8fb89a5f58c92fdbdedceb9a30d46a4e 142 Pfam PF13428 Tetratricopeptide repeat 44 83 5.6E-6 T 11-10-2018 syc0632_c 8fb89a5f58c92fdbdedceb9a30d46a4e 142 SUPERFAMILY SSF48452 8 89 1.02E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc1751_d 2752c4fef823107d866f64d98b678df0 207 Gene3D G3DSA:3.30.160.100 3 104 4.2E-28 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like syc1751_d 2752c4fef823107d866f64d98b678df0 207 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 101 9.2E-28 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 syc1751_d 2752c4fef823107d866f64d98b678df0 207 Gene3D G3DSA:3.30.505.50 145 189 2.1E-19 T 11-10-2018 IPR038416 Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily syc1751_d 2752c4fef823107d866f64d98b678df0 207 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 98 1.9E-26 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 syc1751_d 2752c4fef823107d866f64d98b678df0 207 SUPERFAMILY SSF69754 2 103 3.4E-28 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like syc1751_d 2752c4fef823107d866f64d98b678df0 207 Hamap MF_00839 Ribosome hibernation promoting factor [hpf]. 1 190 21.808 T 11-10-2018 IPR034694 Ribosome hibernation promoting factor, long/plastid syc1751_d 2752c4fef823107d866f64d98b678df0 207 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 132 186 9.4E-26 T 11-10-2018 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal syc0441_c 5dfb88cdd89ff06ae776de4471888d76 91 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 11-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 syc0441_c 5dfb88cdd89ff06ae776de4471888d76 91 Pfam PF00216 Bacterial DNA-binding protein 1 89 1.2E-33 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 syc0441_c 5dfb88cdd89ff06ae776de4471888d76 91 SMART SM00411 1 90 2.2E-45 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 syc0441_c 5dfb88cdd89ff06ae776de4471888d76 91 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 8.0E-17 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 syc0441_c 5dfb88cdd89ff06ae776de4471888d76 91 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 8.0E-17 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 syc0441_c 5dfb88cdd89ff06ae776de4471888d76 91 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 8.0E-17 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 syc0441_c 5dfb88cdd89ff06ae776de4471888d76 91 SUPERFAMILY SSF47729 1 90 4.56E-32 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 syc0441_c 5dfb88cdd89ff06ae776de4471888d76 91 Gene3D G3DSA:4.10.520.10 1 91 2.7E-36 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 syc2329_c 6bc880186576a648f481c64d85afba92 272 PRINTS PR00377 Inositol monophosphatase superfamily signature 209 233 1.7E-16 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 syc2329_c 6bc880186576a648f481c64d85afba92 272 PRINTS PR00377 Inositol monophosphatase superfamily signature 62 78 1.7E-16 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 syc2329_c 6bc880186576a648f481c64d85afba92 272 PRINTS PR00377 Inositol monophosphatase superfamily signature 82 98 1.7E-16 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 syc2329_c 6bc880186576a648f481c64d85afba92 272 PRINTS PR00377 Inositol monophosphatase superfamily signature 178 199 1.7E-16 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 syc2329_c 6bc880186576a648f481c64d85afba92 272 PRINTS PR00377 Inositol monophosphatase superfamily signature 40 60 1.7E-16 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 syc2329_c 6bc880186576a648f481c64d85afba92 272 SUPERFAMILY SSF56655 5 263 7.07E-56 T 11-10-2018 syc2329_c 6bc880186576a648f481c64d85afba92 272 Pfam PF00459 Inositol monophosphatase family 8 241 2.6E-41 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 syc2329_c 6bc880186576a648f481c64d85afba92 272 Gene3D G3DSA:3.30.540.10 2 136 1.1E-33 T 11-10-2018 syc2329_c 6bc880186576a648f481c64d85afba92 272 Gene3D G3DSA:3.40.190.80 155 263 1.9E-9 T 11-10-2018 syc1015_d c721fdb51de087e11c236e7e8bd178fd 345 Gene3D G3DSA:3.30.540.10 7 332 4.2E-133 T 11-10-2018 syc1015_d c721fdb51de087e11c236e7e8bd178fd 345 SUPERFAMILY SSF56655 5 337 3.84E-99 T 11-10-2018 syc1015_d c721fdb51de087e11c236e7e8bd178fd 345 Gene3D G3DSA:3.40.190.90 122 289 4.2E-133 T 11-10-2018 syc1015_d c721fdb51de087e11c236e7e8bd178fd 345 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 4 334 2.1E-129 T 11-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 syc1015_d c721fdb51de087e11c236e7e8bd178fd 345 PIRSF PIRSF004532 1 345 5.5E-142 T 11-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 syc1015_d c721fdb51de087e11c236e7e8bd178fd 345 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 3 338 2.3E-100 T 11-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 syc2520_d f794199b2c6cc8de8d401dd74dd4c1db 735 Gene3D G3DSA:3.30.420.10 348 733 4.6E-238 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 syc2520_d f794199b2c6cc8de8d401dd74dd4c1db 735 Gene3D G3DSA:2.170.260.50 184 281 4.6E-238 T 11-10-2018 syc2520_d f794199b2c6cc8de8d401dd74dd4c1db 735 Pfam PF02171 Piwi domain 442 714 2.0E-14 T 11-10-2018 IPR003165 Piwi domain GO:0003676 syc2520_d f794199b2c6cc8de8d401dd74dd4c1db 735 Gene3D G3DSA:3.40.50.2300 352 506 4.6E-238 T 11-10-2018 syc2520_d f794199b2c6cc8de8d401dd74dd4c1db 735 SMART SM00950 441 720 3.0E-40 T 11-10-2018 IPR003165 Piwi domain GO:0003676 syc2520_d f794199b2c6cc8de8d401dd74dd4c1db 735 Gene3D G3DSA:3.30.70.2620 24 93 4.6E-238 T 11-10-2018 syc2520_d f794199b2c6cc8de8d401dd74dd4c1db 735 SUPERFAMILY SSF53098 307 732 5.82E-97 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily syc2520_d f794199b2c6cc8de8d401dd74dd4c1db 735 Gene3D G3DSA:3.30.530.60 12 627 4.6E-238 T 11-10-2018 syc2069_c 9a11c2e36f754d0089ac5f498fd120b8 467 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 22 467 6.0E-148 T 11-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase syc2069_c 9a11c2e36f754d0089ac5f498fd120b8 467 Gene3D G3DSA:3.40.50.720 145 268 1.7E-22 T 11-10-2018 syc2069_c 9a11c2e36f754d0089ac5f498fd120b8 467 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 22 467 3.2E-162 T 11-10-2018 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 syc2069_c 9a11c2e36f754d0089ac5f498fd120b8 467 SUPERFAMILY SSF51735 147 275 8.66E-15 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily syc2069_c 9a11c2e36f754d0089ac5f498fd120b8 467 Pfam PF13727 CoA-binding domain 67 245 2.2E-38 T 11-10-2018 syc2069_c 9a11c2e36f754d0089ac5f498fd120b8 467 Pfam PF02397 Bacterial sugar transferase 281 458 1.7E-60 T 11-10-2018 IPR003362 Bacterial sugar transferase syc0026_c a381a9d166e2015caf3137354a13698d 172 Gene3D G3DSA:2.60.40.420 72 168 1.0E-31 T 11-10-2018 IPR008972 Cupredoxin syc0026_c a381a9d166e2015caf3137354a13698d 172 Pfam PF13473 Cupredoxin-like domain 65 165 6.4E-20 T 11-10-2018 IPR028096 EfeO-type cupredoxin-like domain syc0026_c a381a9d166e2015caf3137354a13698d 172 SUPERFAMILY SSF49503 60 167 3.58E-17 T 11-10-2018 IPR008972 Cupredoxin syc0339_d 8debc3c7e2d42891397b331ec97013e3 114 Pfam PF10387 Protein of unknown function (DUF2442) 5 78 1.1E-20 T 11-10-2018 IPR018841 Protein of unknown function DUF2442 syc0339_d 8debc3c7e2d42891397b331ec97013e3 114 Gene3D G3DSA:3.30.2020.10 2 80 1.1E-12 T 11-10-2018 IPR036782 NE0471-like, N-terminal syc0339_d 8debc3c7e2d42891397b331ec97013e3 114 SUPERFAMILY SSF143880 2 80 7.45E-24 T 11-10-2018 IPR036782 NE0471-like, N-terminal syc0496_c da383cf8126c0f10198c94b12fa1cfe7 173 Gene3D G3DSA:1.10.490.20 1 173 2.1E-78 T 11-10-2018 IPR038719 Phycobilisome, alpha/beta subunit superfamily syc0496_c da383cf8126c0f10198c94b12fa1cfe7 173 TIGRFAM TIGR01339 phycocy_beta: phycocyanin, beta subunit 3 173 2.1E-98 T 11-10-2018 IPR006247 Phycocyanin, beta subunit GO:0015979|GO:0030089 syc0496_c da383cf8126c0f10198c94b12fa1cfe7 173 Pfam PF00502 Phycobilisome protein 8 171 2.8E-60 T 11-10-2018 IPR012128 Phycobilisome, alpha/beta subunit GO:0015979|GO:0030089 syc0496_c da383cf8126c0f10198c94b12fa1cfe7 173 SUPERFAMILY SSF46458 3 171 1.25E-60 T 11-10-2018 IPR009050 Globin-like superfamily syc0496_c da383cf8126c0f10198c94b12fa1cfe7 173 PIRSF PIRSF000081 2 173 2.5E-62 T 11-10-2018 IPR012128 Phycobilisome, alpha/beta subunit GO:0015979|GO:0030089 syc2075_d 8dc43627b22ffc930d95c74b25704086 1030 Gene3D G3DSA:2.40.30.10 931 1027 1.1E-28 T 11-10-2018 syc2075_d 8dc43627b22ffc930d95c74b25704086 1030 Pfam PF00009 Elongation factor Tu GTP binding domain 528 687 2.1E-34 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 syc2075_d 8dc43627b22ffc930d95c74b25704086 1030 SUPERFAMILY SSF50447 932 1026 1.9E-27 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily syc2075_d 8dc43627b22ffc930d95c74b25704086 1030 Gene3D G3DSA:3.40.50.300 520 697 2.4E-69 T 11-10-2018 syc2075_d 8dc43627b22ffc930d95c74b25704086 1030 Gene3D G3DSA:3.40.50.10050 823 930 4.1E-36 T 11-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily syc2075_d 8dc43627b22ffc930d95c74b25704086 1030 ProSitePatterns PS01176 Initiation factor 2 signature. 979 1001 - T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 syc2075_d 8dc43627b22ffc930d95c74b25704086 1030 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 446 494 5.6E-11 T 11-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal syc2075_d 8dc43627b22ffc930d95c74b25704086 1030 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 4 50 9.2E-10 T 11-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal syc2075_d 8dc43627b22ffc930d95c74b25704086 1030 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 526 685 2.0E-33 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 syc2075_d 8dc43627b22ffc930d95c74b25704086 1030 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 5 1026 17.095 T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 syc2075_d 8dc43627b22ffc930d95c74b25704086 1030 SUPERFAMILY SSF52540 519 693 1.57E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc2075_d 8dc43627b22ffc930d95c74b25704086 1030 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 438 1028 1.5E-254 T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 syc2075_d 8dc43627b22ffc930d95c74b25704086 1030 Pfam PF11987 Translation-initiation factor 2 819 919 2.9E-32 T 11-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 syc2075_d 8dc43627b22ffc930d95c74b25704086 1030 Gene3D G3DSA:2.40.30.10 698 814 1.4E-39 T 11-10-2018 syc2075_d 8dc43627b22ffc930d95c74b25704086 1030 Gene3D G3DSA:1.10.10.2480 4 66 5.9E-16 T 11-10-2018 syc2075_d 8dc43627b22ffc930d95c74b25704086 1030 SUPERFAMILY SSF52156 822 936 9.29E-33 T 11-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily syc2075_d 8dc43627b22ffc930d95c74b25704086 1030 SUPERFAMILY SSF50447 698 781 2.87E-24 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily syc2075_d 8dc43627b22ffc930d95c74b25704086 1030 PRINTS PR00315 GTP-binding elongation factor signature 526 539 1.8E-9 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 syc2075_d 8dc43627b22ffc930d95c74b25704086 1030 PRINTS PR00315 GTP-binding elongation factor signature 594 605 1.8E-9 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 syc2075_d 8dc43627b22ffc930d95c74b25704086 1030 PRINTS PR00315 GTP-binding elongation factor signature 630 639 1.8E-9 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 syc2075_d 8dc43627b22ffc930d95c74b25704086 1030 PRINTS PR00315 GTP-binding elongation factor signature 578 588 1.8E-9 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 syc0274_d 494287bf6dcbdbe0ed577a39bba95c5f 66 Gene3D G3DSA:2.40.50.530 1 65 7.3E-25 T 11-10-2018 syc0274_d 494287bf6dcbdbe0ed577a39bba95c5f 66 Pfam PF01632 Ribosomal protein L35 2 62 1.3E-23 T 11-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc0274_d 494287bf6dcbdbe0ed577a39bba95c5f 66 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 5.9E-27 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 syc0274_d 494287bf6dcbdbe0ed577a39bba95c5f 66 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 11-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc0274_d 494287bf6dcbdbe0ed577a39bba95c5f 66 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 18.368 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 syc0274_d 494287bf6dcbdbe0ed577a39bba95c5f 66 PRINTS PR00064 Ribosomal protein L35 signature 21 35 9.9E-17 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 syc0274_d 494287bf6dcbdbe0ed577a39bba95c5f 66 PRINTS PR00064 Ribosomal protein L35 signature 3 20 9.9E-17 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 syc0274_d 494287bf6dcbdbe0ed577a39bba95c5f 66 PRINTS PR00064 Ribosomal protein L35 signature 36 54 9.9E-17 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 syc0274_d 494287bf6dcbdbe0ed577a39bba95c5f 66 SUPERFAMILY SSF143034 2 64 3.92E-22 T 11-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc0746_d e2591ff832e17259638d65016b100da4 364 SUPERFAMILY SSF81301 5 85 2.94E-15 T 11-10-2018 syc0746_d e2591ff832e17259638d65016b100da4 364 Gene3D G3DSA:3.30.460.10 1 84 3.6E-16 T 11-10-2018 syc0746_d e2591ff832e17259638d65016b100da4 364 SUPERFAMILY SSF81891 87 359 2.35E-46 T 11-10-2018 syc0746_d e2591ff832e17259638d65016b100da4 364 Pfam PF01743 Poly A polymerase head domain 44 89 3.4E-13 T 11-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 syc0746_d e2591ff832e17259638d65016b100da4 364 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 115 175 1.1E-17 T 11-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 syc0746_d e2591ff832e17259638d65016b100da4 364 Pfam PF13735 tRNA nucleotidyltransferase domain 2 putative 211 350 7.2E-11 T 11-10-2018 IPR032810 CCA-adding enzyme, C-terminal syc0746_d e2591ff832e17259638d65016b100da4 364 Gene3D G3DSA:1.10.3090.10 87 347 1.1E-38 T 11-10-2018 syc1593_c 5b692db94023849a77f78212370b60fa 287 TIGRFAM TIGR00259 thylakoid_BtpA: membrane complex biogenesis protein, BtpA family 11 263 2.8E-111 T 11-10-2018 IPR005137 Membrane complex biogenesis protein, BtpA family syc1593_c 5b692db94023849a77f78212370b60fa 287 PIRSF PIRSF005956 1 268 4.4E-103 T 11-10-2018 IPR005137 Membrane complex biogenesis protein, BtpA family syc1593_c 5b692db94023849a77f78212370b60fa 287 SUPERFAMILY SSF51366 37 262 7.53E-24 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 syc1593_c 5b692db94023849a77f78212370b60fa 287 ProDom PD011184 BTPA I PHOTOSYSTEM BIOGENESIS ASSEMBLY SGCQ TRIPHOSPHATASE NUCLEOSIDE PAE3553 ENZYME 32 206 1.0E-95 T 11-10-2018 IPR005137 Membrane complex biogenesis protein, BtpA family syc1593_c 5b692db94023849a77f78212370b60fa 287 Pfam PF03437 BtpA family 10 262 8.7E-106 T 11-10-2018 IPR005137 Membrane complex biogenesis protein, BtpA family syc2507_d a876ddf8b33ca851d65aeac5748e5d58 1100 Pfam PF10385 RNA polymerase beta subunit external 1 domain 454 519 2.0E-13 T 11-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 syc2507_d a876ddf8b33ca851d65aeac5748e5d58 1100 ProSitePatterns PS01166 RNA polymerases beta chain signature. 819 831 - T 11-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 syc2507_d a876ddf8b33ca851d65aeac5748e5d58 1100 Gene3D G3DSA:2.40.50.150 685 816 0.0 T 11-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 syc2507_d a876ddf8b33ca851d65aeac5748e5d58 1100 Gene3D G3DSA:2.30.150.10 454 521 0.0 T 11-10-2018 syc2507_d a876ddf8b33ca851d65aeac5748e5d58 1100 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 2 1059 12.696 T 11-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 syc2507_d a876ddf8b33ca851d65aeac5748e5d58 1100 Gene3D G3DSA:2.40.270.10 654 959 0.0 T 11-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 syc2507_d a876ddf8b33ca851d65aeac5748e5d58 1100 Pfam PF04560 RNA polymerase Rpb2, domain 7 983 1057 2.9E-25 T 11-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 syc2507_d a876ddf8b33ca851d65aeac5748e5d58 1100 SUPERFAMILY SSF64484 7 1059 0.0 T 11-10-2018 syc2507_d a876ddf8b33ca851d65aeac5748e5d58 1100 Gene3D G3DSA:2.40.50.100 579 653 0.0 T 11-10-2018 syc2507_d a876ddf8b33ca851d65aeac5748e5d58 1100 Pfam PF04565 RNA polymerase Rpb2, domain 3 374 442 7.7E-30 T 11-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 syc2507_d a876ddf8b33ca851d65aeac5748e5d58 1100 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 193 793 0.0 T 11-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 syc2507_d a876ddf8b33ca851d65aeac5748e5d58 1100 Gene3D G3DSA:3.90.1100.10 12 578 0.0 T 11-10-2018 syc2507_d a876ddf8b33ca851d65aeac5748e5d58 1100 Gene3D G3DSA:3.90.1110.10 133 306 0.0 T 11-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 syc2507_d a876ddf8b33ca851d65aeac5748e5d58 1100 Pfam PF00562 RNA polymerase Rpb2, domain 6 583 981 1.5E-159 T 11-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 syc2507_d a876ddf8b33ca851d65aeac5748e5d58 1100 Gene3D G3DSA:3.90.1800.10 969 1055 1.8E-11 T 11-10-2018 syc2507_d a876ddf8b33ca851d65aeac5748e5d58 1100 Pfam PF04563 RNA polymerase beta subunit 17 359 9.6E-23 T 11-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 syc2507_d a876ddf8b33ca851d65aeac5748e5d58 1100 Pfam PF04561 RNA polymerase Rpb2, domain 2 130 315 8.8E-52 T 11-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 syc2277_d 5e7ae9b18a2fcb09fc0a9a9545d9b62d 126 Gene3D G3DSA:3.40.50.12740 7 126 1.3E-48 T 11-10-2018 syc2277_d 5e7ae9b18a2fcb09fc0a9a9545d9b62d 126 Pfam PF00072 Response regulator receiver domain 9 120 1.6E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 syc2277_d 5e7ae9b18a2fcb09fc0a9a9545d9b62d 126 SUPERFAMILY SSF52172 5 125 7.12E-41 T 11-10-2018 IPR011006 CheY-like superfamily syc2277_d 5e7ae9b18a2fcb09fc0a9a9545d9b62d 126 SMART SM00448 7 120 5.8E-38 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 syc0421_c b335d8291e798d218241ec5118906419 362 SUPERFAMILY SSF51120 196 296 1.83E-21 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal syc0421_c b335d8291e798d218241ec5118906419 362 PRINTS PR00313 NodO calcium binding signature 238 246 1.9E-7 T 11-10-2018 syc0421_c b335d8291e798d218241ec5118906419 362 PRINTS PR00313 NodO calcium binding signature 217 228 1.9E-7 T 11-10-2018 syc0421_c b335d8291e798d218241ec5118906419 362 PRINTS PR00313 NodO calcium binding signature 229 237 1.9E-7 T 11-10-2018 syc0421_c b335d8291e798d218241ec5118906419 362 PRINTS PR00313 NodO calcium binding signature 247 256 1.9E-7 T 11-10-2018 syc0421_c b335d8291e798d218241ec5118906419 362 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 234 252 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site syc0421_c b335d8291e798d218241ec5118906419 362 Gene3D G3DSA:2.150.10.10 160 338 3.2E-21 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal syc0421_c b335d8291e798d218241ec5118906419 362 Pfam PF08548 Peptidase M10 serralysin C terminal 223 281 6.8E-5 T 11-10-2018 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 syc0421_c b335d8291e798d218241ec5118906419 362 Pfam PF13946 Domain of unknown function (DUF4214) 46 111 2.7E-8 T 11-10-2018 IPR025282 Domain of unknown function DUF4214 syc0968_d 2162a2ea6da8b94ef1c736ea6d848594 450 Gene3D G3DSA:2.40.30.170 277 377 1.5E-22 T 11-10-2018 syc0968_d 2162a2ea6da8b94ef1c736ea6d848594 450 Gene3D G3DSA:1.10.287.470 147 210 1.5E-5 T 11-10-2018 syc0968_d 2162a2ea6da8b94ef1c736ea6d848594 450 Gene3D G3DSA:2.40.50.100 76 109 9.5E-16 T 11-10-2018 syc0968_d 2162a2ea6da8b94ef1c736ea6d848594 450 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 306 330 5.9E-9 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 syc0968_d 2162a2ea6da8b94ef1c736ea6d848594 450 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 88 108 5.9E-9 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 syc0968_d 2162a2ea6da8b94ef1c736ea6d848594 450 Gene3D G3DSA:2.40.30.170 63 75 9.5E-16 T 11-10-2018 syc0968_d 2162a2ea6da8b94ef1c736ea6d848594 450 Gene3D G3DSA:2.40.420.20 378 436 4.0E-8 T 11-10-2018 syc0968_d 2162a2ea6da8b94ef1c736ea6d848594 450 SUPERFAMILY SSF111369 66 161 2.75E-11 T 11-10-2018 syc0968_d 2162a2ea6da8b94ef1c736ea6d848594 450 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 227 435 7.3E-32 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 syc0968_d 2162a2ea6da8b94ef1c736ea6d848594 450 SUPERFAMILY SSF111369 215 368 3.4E-9 T 11-10-2018 syc0968_d 2162a2ea6da8b94ef1c736ea6d848594 450 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 62 368 3.7E-14 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain syc0968_d 2162a2ea6da8b94ef1c736ea6d848594 450 Gene3D G3DSA:2.40.50.100 225 276 2.6E-7 T 11-10-2018 syc0968_d 2162a2ea6da8b94ef1c736ea6d848594 450 Gene3D G3DSA:1.10.287.470 110 132 9.5E-16 T 11-10-2018 syc2150_c 9b37d665be4b831fc2409ee3787a3189 342 Pfam PF00676 Dehydrogenase E1 component 28 332 4.4E-88 T 11-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 syc2150_c 9b37d665be4b831fc2409ee3787a3189 342 SUPERFAMILY SSF52518 13 341 1.0E-105 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold syc2150_c 9b37d665be4b831fc2409ee3787a3189 342 Gene3D G3DSA:3.40.50.970 1 342 7.2E-129 T 11-10-2018 syc2150_c 9b37d665be4b831fc2409ee3787a3189 342 TIGRFAM TIGR03182 PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 20 339 7.8E-144 T 11-10-2018 IPR017597 Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y GO:0004739|GO:0006086|GO:0043231 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-70268 syc0257_c ad608c802a9b1518a665bb047857e26a 231 Pfam PF13759 Putative 2OG-Fe(II) oxygenase 94 202 1.4E-25 T 11-10-2018 IPR012668 Conserved hypothetical protein CHP02466 syc0257_c ad608c802a9b1518a665bb047857e26a 231 Gene3D G3DSA:2.60.120.620 17 209 2.1E-36 T 11-10-2018 syc0257_c ad608c802a9b1518a665bb047857e26a 231 TIGRFAM TIGR02466 TIGR02466: conserved hypothetical protein 5 204 5.2E-27 T 11-10-2018 IPR012668 Conserved hypothetical protein CHP02466 syc0257_c ad608c802a9b1518a665bb047857e26a 231 SUPERFAMILY SSF51197 46 202 3.85E-6 T 11-10-2018 syc2348_c 456864f029da9f4db60e90439be2b76e 394 Gene3D G3DSA:1.10.645.20 9 394 1.0E-150 T 11-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc2348_c 456864f029da9f4db60e90439be2b76e 394 SUPERFAMILY SSF56762 20 394 7.2E-120 T 11-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc2348_c 456864f029da9f4db60e90439be2b76e 394 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 47 58 - T 11-10-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc2348_c 456864f029da9f4db60e90439be2b76e 394 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 3 394 43.353 T 11-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc2348_c 456864f029da9f4db60e90439be2b76e 394 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 124 394 1.7E-100 T 11-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc2348_c 456864f029da9f4db60e90439be2b76e 394 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 10 394 1.4E-138 T 11-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc0053_d 0eb6ee908f2af558ad2277fb55495a52 245 SUPERFAMILY SSF51735 7 229 2.44E-64 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily syc0053_d 0eb6ee908f2af558ad2277fb55495a52 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 1.3E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR syc0053_d 0eb6ee908f2af558ad2277fb55495a52 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 1.3E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR syc0053_d 0eb6ee908f2af558ad2277fb55495a52 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 1.3E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR syc0053_d 0eb6ee908f2af558ad2277fb55495a52 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 1.3E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR syc0053_d 0eb6ee908f2af558ad2277fb55495a52 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 1.3E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR syc0053_d 0eb6ee908f2af558ad2277fb55495a52 245 Gene3D G3DSA:3.40.50.720 9 244 2.5E-66 T 11-10-2018 syc0053_d 0eb6ee908f2af558ad2277fb55495a52 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 2.2E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR syc0053_d 0eb6ee908f2af558ad2277fb55495a52 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 2.2E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR syc0053_d 0eb6ee908f2af558ad2277fb55495a52 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 2.2E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR syc0053_d 0eb6ee908f2af558ad2277fb55495a52 245 PIRSF PIRSF000126 4 237 4.3E-53 T 11-10-2018 syc0053_d 0eb6ee908f2af558ad2277fb55495a52 245 Pfam PF00106 short chain dehydrogenase 12 197 5.5E-50 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR syc0053_d 0eb6ee908f2af558ad2277fb55495a52 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 syc0464_c 27d87da251e819ba70673f7b52592e75 774 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 296 757 4.8E-251 T 11-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 syc0464_c 27d87da251e819ba70673f7b52592e75 774 Gene3D G3DSA:3.20.20.80 233 655 3.0E-163 T 11-10-2018 syc0464_c 27d87da251e819ba70673f7b52592e75 774 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 134 216 3.5E-25 T 11-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 syc0464_c 27d87da251e819ba70673f7b52592e75 774 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 32 109 6.7E-6 T 11-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 syc0464_c 27d87da251e819ba70673f7b52592e75 774 Gene3D G3DSA:2.60.40.1180 656 760 2.4E-36 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta syc0464_c 27d87da251e819ba70673f7b52592e75 774 SUPERFAMILY SSF51011 657 759 9.71E-37 T 11-10-2018 syc0464_c 27d87da251e819ba70673f7b52592e75 774 SUPERFAMILY SSF81296 149 206 3.64E-8 T 11-10-2018 IPR014756 Immunoglobulin E-set syc0464_c 27d87da251e819ba70673f7b52592e75 774 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 661 759 4.3E-26 T 11-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 syc0464_c 27d87da251e819ba70673f7b52592e75 774 SUPERFAMILY SSF81296 23 124 5.6E-15 T 11-10-2018 IPR014756 Immunoglobulin E-set syc0464_c 27d87da251e819ba70673f7b52592e75 774 SUPERFAMILY SSF51445 189 649 1.68E-119 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily syc0464_c 27d87da251e819ba70673f7b52592e75 774 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 110 760 44.905 T 11-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 syc0464_c 27d87da251e819ba70673f7b52592e75 774 Pfam PF00128 Alpha amylase, catalytic domain 308 379 6.6E-10 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 syc0464_c 27d87da251e819ba70673f7b52592e75 774 PIRSF PIRSF000463 13 770 2.2E-296 T 11-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 syc0464_c 27d87da251e819ba70673f7b52592e75 774 SMART SM00642 290 643 6.1E-7 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 syc0464_c 27d87da251e819ba70673f7b52592e75 774 Gene3D G3DSA:2.60.40.10 10 230 1.3E-68 T 11-10-2018 IPR013783 Immunoglobulin-like fold syc2206_d 64476f062b71ec4b7c37b9ea50fdb4e9 531 Pfam PF03065 Glycosyl hydrolase family 57 7 362 6.7E-47 T 11-10-2018 IPR004300 Glycoside hydrolase family 57, N-terminal domain GO:0003824|GO:0005975 syc2206_d 64476f062b71ec4b7c37b9ea50fdb4e9 531 Pfam PF09210 Domain of unknown function (DUF1957) 428 526 8.4E-39 T 11-10-2018 IPR015293 Domain of unknown function DUF1957 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 syc2206_d 64476f062b71ec4b7c37b9ea50fdb4e9 531 SUPERFAMILY SSF88713 4 416 3.71E-130 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 syc2206_d 64476f062b71ec4b7c37b9ea50fdb4e9 531 Gene3D G3DSA:1.20.1430.10 420 528 5.7E-39 T 11-10-2018 IPR037090 Glycoside hydrolase families 57, central domain KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 syc2206_d 64476f062b71ec4b7c37b9ea50fdb4e9 531 SUPERFAMILY SSF88688 420 528 2.91E-41 T 11-10-2018 IPR028995 Glycoside hydrolase families 57/38, central domain superfamily syc2206_d 64476f062b71ec4b7c37b9ea50fdb4e9 531 Gene3D G3DSA:3.20.110.10 3 409 5.7E-164 T 11-10-2018 IPR027291 Glycoside hydrolase 38, N-terminal domain superfamily syc0966_c 4630046bc6583bda55fd17a8d3d57640 239 Pfam PF01863 Protein of unknown function DUF45 27 233 3.0E-60 T 11-10-2018 IPR002725 Protein of unknown function DUF45 syc0966_c 4630046bc6583bda55fd17a8d3d57640 239 Gene3D G3DSA:3.30.2010.10 143 233 1.4E-14 T 11-10-2018 syc2321_c eb54fa41da4ed9a09c7e3dca76aaf318 496 TIGRFAM TIGR00959 ffh: signal recognition particle protein 13 440 6.4E-182 T 11-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 syc2321_c eb54fa41da4ed9a09c7e3dca76aaf318 496 Gene3D G3DSA:1.20.120.140 16 316 2.3E-126 T 11-10-2018 syc2321_c eb54fa41da4ed9a09c7e3dca76aaf318 496 SUPERFAMILY SSF47446 308 442 3.53E-42 T 11-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 syc2321_c eb54fa41da4ed9a09c7e3dca76aaf318 496 Pfam PF00448 SRP54-type protein, GTPase domain 111 306 1.2E-76 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 syc2321_c eb54fa41da4ed9a09c7e3dca76aaf318 496 SMART SM00963 12 97 3.2E-34 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 syc2321_c eb54fa41da4ed9a09c7e3dca76aaf318 496 Gene3D G3DSA:1.10.260.30 337 460 5.5E-40 T 11-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 syc2321_c eb54fa41da4ed9a09c7e3dca76aaf318 496 SMART SM00382 110 311 3.3E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain syc2321_c eb54fa41da4ed9a09c7e3dca76aaf318 496 Pfam PF02978 Signal peptide binding domain 337 438 6.1E-29 T 11-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 syc2321_c eb54fa41da4ed9a09c7e3dca76aaf318 496 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 16 453 35.04 T 11-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 syc2321_c eb54fa41da4ed9a09c7e3dca76aaf318 496 SMART SM00962 111 306 9.2E-114 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 syc2321_c eb54fa41da4ed9a09c7e3dca76aaf318 496 SUPERFAMILY SSF52540 53 358 2.9E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc2321_c eb54fa41da4ed9a09c7e3dca76aaf318 496 Pfam PF02881 SRP54-type protein, helical bundle domain 16 93 2.4E-22 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 syc2321_c eb54fa41da4ed9a09c7e3dca76aaf318 496 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 279 292 - T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 syc2321_c eb54fa41da4ed9a09c7e3dca76aaf318 496 Gene3D G3DSA:3.40.50.300 101 295 2.3E-126 T 11-10-2018 syc0341_d 613fb46c6eb1805736c8e384c38bdc9b 86 Pfam PF10387 Protein of unknown function (DUF2442) 18 74 6.9E-12 T 11-10-2018 IPR018841 Protein of unknown function DUF2442 syc0341_d 613fb46c6eb1805736c8e384c38bdc9b 86 Gene3D G3DSA:3.30.2020.20 8 71 1.7E-10 T 11-10-2018 syc0929_d f9fc11c5ff47fe1ce72a9f1fdd081178 558 Gene3D G3DSA:2.60.120.260 354 557 5.2E-26 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily syc0929_d f9fc11c5ff47fe1ce72a9f1fdd081178 558 SMART SM00939 312 545 2.9E-57 T 11-10-2018 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 syc0929_d f9fc11c5ff47fe1ce72a9f1fdd081178 558 SUPERFAMILY SSF53474 24 348 2.7E-50 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold syc0929_d f9fc11c5ff47fe1ce72a9f1fdd081178 558 Gene3D G3DSA:3.40.50.1820 26 343 4.2E-94 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold syc0929_d f9fc11c5ff47fe1ce72a9f1fdd081178 558 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 28 288 1.1E-67 T 11-10-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 syc0929_d f9fc11c5ff47fe1ce72a9f1fdd081178 558 SUPERFAMILY SSF49785 342 549 1.66E-45 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily syc0929_d f9fc11c5ff47fe1ce72a9f1fdd081178 558 TIGRFAM TIGR00976 /NonD: hydrolase CocE/NonD family protein 28 548 1.2E-116 T 11-10-2018 IPR005674 CocE/Serine esterase GO:0016787 syc0929_d f9fc11c5ff47fe1ce72a9f1fdd081178 558 Pfam PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain 327 522 2.9E-17 T 11-10-2018 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 syc0929_d f9fc11c5ff47fe1ce72a9f1fdd081178 558 Gene3D G3DSA:1.10.3020.10 154 239 4.2E-94 T 11-10-2018 syc1434_d 4b076d7a14bb2e30196e9a500f6aa5db 186 SUPERFAMILY SSF50475 2 186 7.36E-32 T 11-10-2018 syc1434_d 4b076d7a14bb2e30196e9a500f6aa5db 186 Gene3D G3DSA:2.30.110.10 1 186 1.1E-52 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 syc1434_d 4b076d7a14bb2e30196e9a500f6aa5db 186 TIGRFAM TIGR04026 PPOX_FMN_cyano: PPOX class probable FMN-dependent enzyme, alr4036 family 2 186 1.3E-68 T 11-10-2018 IPR024015 Pyridoxamine 5'-phosphate oxidase, probable FMN-dependent, Alr4036 family KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282 syc1434_d 4b076d7a14bb2e30196e9a500f6aa5db 186 Pfam PF12766 Pyridoxamine 5'-phosphate oxidase 3 92 2.5E-25 T 11-10-2018 IPR024624 Pyridoxamine 5'-phosphate oxidase, Alr4036 family, FMN-binding domain GO:0010181 syc1433_d 5ca9846822836c9f5efcaec06654ce5a 399 Gene3D G3DSA:3.40.640.10 6 252 3.6E-97 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 syc1433_d 5ca9846822836c9f5efcaec06654ce5a 399 Gene3D G3DSA:3.90.1150.10 255 394 9.4E-43 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 syc1433_d 5ca9846822836c9f5efcaec06654ce5a 399 PIRSF PIRSF000390 10 395 2.1E-113 T 11-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase syc1433_d 5ca9846822836c9f5efcaec06654ce5a 399 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 24 389 4.1E-129 T 11-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase syc1433_d 5ca9846822836c9f5efcaec06654ce5a 399 SUPERFAMILY SSF53383 22 391 2.48E-117 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase syc1633_c 3feb5dbf53f280c1cad4145a4d8ea5f9 213 Gene3D G3DSA:1.10.940.10 72 198 2.1E-27 T 11-10-2018 IPR035926 NusB-like superfamily syc1633_c 3feb5dbf53f280c1cad4145a4d8ea5f9 213 Pfam PF01029 NusB family 109 198 2.2E-27 T 11-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 syc1633_c 3feb5dbf53f280c1cad4145a4d8ea5f9 213 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 87 200 2.2E-33 T 11-10-2018 IPR011605 NusB antitermination factor GO:0006353 syc1633_c 3feb5dbf53f280c1cad4145a4d8ea5f9 213 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 2 203 17.529 T 11-10-2018 IPR011605 NusB antitermination factor GO:0006353 syc1633_c 3feb5dbf53f280c1cad4145a4d8ea5f9 213 SUPERFAMILY SSF48013 105 198 4.71E-27 T 11-10-2018 IPR035926 NusB-like superfamily syc0833_d 2f16222a139d3b2a1dbdb8a1159daf65 508 Hamap MF_01495 Photosystem II CP47 reaction center protein [psbB]. 1 508 61.487 T 11-10-2018 IPR017486 Photosystem II CP47 reaction centre protein GO:0009523|GO:0009772|GO:0015979|GO:0016020|GO:0016168|GO:0045156 syc0833_d 2f16222a139d3b2a1dbdb8a1159daf65 508 SUPERFAMILY SSF161077 2 487 9.81E-213 T 11-10-2018 IPR036001 Photosystem antenna protein-like superfamily GO:0009521|GO:0009767|GO:0016020|GO:0016168|GO:0019684 syc0833_d 2f16222a139d3b2a1dbdb8a1159daf65 508 Pfam PF00421 Photosystem II protein 1 500 1.5E-258 T 11-10-2018 IPR000932 Photosystem antenna protein-like GO:0009521|GO:0009767|GO:0016020|GO:0016168|GO:0019684 syc0833_d 2f16222a139d3b2a1dbdb8a1159daf65 508 Gene3D G3DSA:3.10.680.10 272 444 2.4E-85 T 11-10-2018 syc0833_d 2f16222a139d3b2a1dbdb8a1159daf65 508 TIGRFAM TIGR03039 PS_II_CP47: photosystem II chlorophyll-binding protein CP47 1 504 0.0 T 11-10-2018 IPR017486 Photosystem II CP47 reaction centre protein GO:0009523|GO:0009772|GO:0015979|GO:0016020|GO:0016168|GO:0045156 syc0229_d ea730ed91b8633cde4e0586b66e6dcd8 919 Pfam PF00271 Helicase conserved C-terminal domain 356 419 1.8E-5 T 11-10-2018 IPR001650 Helicase, C-terminal syc0229_d ea730ed91b8633cde4e0586b66e6dcd8 919 Pfam PF08148 DSHCT (NUC185) domain 750 912 5.7E-37 T 11-10-2018 IPR012961 ATP-dependent RNA helicase Ski2, C-terminal syc0229_d ea730ed91b8633cde4e0586b66e6dcd8 919 SUPERFAMILY SSF52540 214 431 8.44E-33 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0229_d ea730ed91b8633cde4e0586b66e6dcd8 919 SUPERFAMILY SSF52540 34 202 8.57E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0229_d ea730ed91b8633cde4e0586b66e6dcd8 919 Gene3D G3DSA:1.10.3380.30 686 896 1.2E-13 T 11-10-2018 syc0229_d ea730ed91b8633cde4e0586b66e6dcd8 919 SMART SM00487 35 224 1.3E-35 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain syc0229_d ea730ed91b8633cde4e0586b66e6dcd8 919 Gene3D G3DSA:3.40.50.300 14 217 6.1E-65 T 11-10-2018 syc0229_d ea730ed91b8633cde4e0586b66e6dcd8 919 SMART SM00490 334 419 8.3E-11 T 11-10-2018 IPR001650 Helicase, C-terminal syc0229_d ea730ed91b8633cde4e0586b66e6dcd8 919 Pfam PF00270 DEAD/DEAH box helicase 41 193 6.2E-21 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 syc0229_d ea730ed91b8633cde4e0586b66e6dcd8 919 SMART SM01142 746 916 6.1E-52 T 11-10-2018 IPR012961 ATP-dependent RNA helicase Ski2, C-terminal syc0229_d ea730ed91b8633cde4e0586b66e6dcd8 919 Gene3D G3DSA:3.40.50.300 219 438 1.3E-53 T 11-10-2018 syc2441_c 9d6e9b339c21ec223185867c38869bd3 247 Pfam PF14622 Ribonuclease-III-like 41 143 1.3E-18 T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 syc2441_c 9d6e9b339c21ec223185867c38869bd3 247 SMART SM00358 173 241 2.1E-13 T 11-10-2018 IPR014720 Double-stranded RNA-binding domain syc2441_c 9d6e9b339c21ec223185867c38869bd3 247 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 36 238 1.1E-53 T 11-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 syc2441_c 9d6e9b339c21ec223185867c38869bd3 247 SMART SM00535 38 166 2.7E-36 T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 syc2441_c 9d6e9b339c21ec223185867c38869bd3 247 ProSitePatterns PS00517 Ribonuclease III family signature. 55 63 - T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 syc2441_c 9d6e9b339c21ec223185867c38869bd3 247 Pfam PF00035 Double-stranded RNA binding motif 173 239 1.6E-10 T 11-10-2018 IPR014720 Double-stranded RNA-binding domain syc2441_c 9d6e9b339c21ec223185867c38869bd3 247 Hamap MF_00104 Ribonuclease 3 [rnc]. 23 237 23.338 T 11-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 syc2441_c 9d6e9b339c21ec223185867c38869bd3 247 SUPERFAMILY SSF54768 126 241 9.59E-19 T 11-10-2018 syc2441_c 9d6e9b339c21ec223185867c38869bd3 247 SUPERFAMILY SSF69065 16 168 9.07E-36 T 11-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 syc2441_c 9d6e9b339c21ec223185867c38869bd3 247 Gene3D G3DSA:1.10.1520.10 35 163 3.8E-33 T 11-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 syc2441_c 9d6e9b339c21ec223185867c38869bd3 247 Gene3D G3DSA:3.30.160.20 172 239 6.5E-15 T 11-10-2018 syc0321_d f4496ebc416987cf0cee844f22a4dbeb 276 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 92 125 - T 11-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 syc0321_d f4496ebc416987cf0cee844f22a4dbeb 276 Gene3D G3DSA:3.30.950.10 127 246 6.4E-39 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 syc0321_d f4496ebc416987cf0cee844f22a4dbeb 276 Gene3D G3DSA:3.40.1010.10 12 126 2.8E-31 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 syc0321_d f4496ebc416987cf0cee844f22a4dbeb 276 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 19 224 1.0E-49 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 syc0321_d f4496ebc416987cf0cee844f22a4dbeb 276 TIGRFAM TIGR01465 cobM_cbiF: precorrin-4 C11-methyltransferase 19 264 3.7E-93 T 11-10-2018 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase GO:0009236|GO:0046026 syc0321_d f4496ebc416987cf0cee844f22a4dbeb 276 SUPERFAMILY SSF53790 18 264 5.1E-68 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 syc0637_d f79d5fde9035c404d2a3e643de52c5ee 861 PIRSF PIRSF036687 1 849 0.0 T 11-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 syc0637_d f79d5fde9035c404d2a3e643de52c5ee 861 Gene3D G3DSA:3.40.1060.10 375 671 9.5E-144 T 11-10-2018 IPR015932 Aconitase, domain 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-1268020|Reactome: R-HSA-71403 syc0637_d f79d5fde9035c404d2a3e643de52c5ee 861 SUPERFAMILY SSF74778 1 161 2.22E-63 T 11-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 syc0637_d f79d5fde9035c404d2a3e643de52c5ee 861 SUPERFAMILY SSF53732 369 845 1.44E-143 T 11-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 syc0637_d f79d5fde9035c404d2a3e643de52c5ee 861 Pfam PF06434 Aconitate hydratase 2 N-terminus 169 372 1.8E-98 T 11-10-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 syc0637_d f79d5fde9035c404d2a3e643de52c5ee 861 ProSitePatterns PS01244 Aconitase family signature 2. 750 763 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 syc0637_d f79d5fde9035c404d2a3e643de52c5ee 861 Pfam PF00330 Aconitase family (aconitate hydratase) 452 807 8.4E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 syc0637_d f79d5fde9035c404d2a3e643de52c5ee 861 Gene3D G3DSA:1.25.40.310 1 162 1.4E-62 T 11-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 syc0637_d f79d5fde9035c404d2a3e643de52c5ee 861 Gene3D G3DSA:3.30.499.10 673 853 2.0E-63 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 syc0637_d f79d5fde9035c404d2a3e643de52c5ee 861 Gene3D G3DSA:3.20.19.10 163 351 1.0E-65 T 11-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 syc0637_d f79d5fde9035c404d2a3e643de52c5ee 861 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 843 0.0 T 11-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 syc0637_d f79d5fde9035c404d2a3e643de52c5ee 861 Pfam PF11791 Aconitate B N-terminal domain 4 157 5.0E-66 T 11-10-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 syc0637_d f79d5fde9035c404d2a3e643de52c5ee 861 SUPERFAMILY SSF52016 163 362 8.63E-65 T 11-10-2018 syc0637_d f79d5fde9035c404d2a3e643de52c5ee 861 ProSitePatterns PS00450 Aconitase family signature 1. 692 709 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 syc0637_d f79d5fde9035c404d2a3e643de52c5ee 861 Gene3D G3DSA:3.30.499.10 392 519 9.5E-144 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 syc0369_c 17f3e6e29f8d5943cccd152f30827af1 235 Gene3D G3DSA:3.40.50.12280 15 189 2.0E-71 T 11-10-2018 syc0369_c 17f3e6e29f8d5943cccd152f30827af1 235 SUPERFAMILY SSF56770 24 172 5.76E-65 T 11-10-2018 syc0369_c 17f3e6e29f8d5943cccd152f30827af1 235 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 134 150 - T 11-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc0369_c 17f3e6e29f8d5943cccd152f30827af1 235 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 25 168 1.9E-67 T 11-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc0369_c 17f3e6e29f8d5943cccd152f30827af1 235 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 78 162 1.4E-24 T 11-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc0369_c 17f3e6e29f8d5943cccd152f30827af1 235 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 16 167 40.306 T 11-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc0306_c d8dad4003bad3f8d79dd4070fb1c93b6 438 SUPERFAMILY SSF52540 42 243 1.28E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0306_c d8dad4003bad3f8d79dd4070fb1c93b6 438 Pfam PF14524 Wzt C-terminal domain 276 408 5.1E-28 T 11-10-2018 IPR029439 Wzt, C-terminal syc0306_c d8dad4003bad3f8d79dd4070fb1c93b6 438 Gene3D G3DSA:3.40.50.300 37 249 3.3E-45 T 11-10-2018 syc0306_c d8dad4003bad3f8d79dd4070fb1c93b6 438 SMART SM00382 56 227 5.9E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain syc0306_c d8dad4003bad3f8d79dd4070fb1c93b6 438 Gene3D G3DSA:2.70.50.60 270 407 2.7E-18 T 11-10-2018 syc0306_c d8dad4003bad3f8d79dd4070fb1c93b6 438 Pfam PF00005 ABC transporter 47 179 1.0E-17 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 syc1034_c 2b8860e3493a79ccc00a9e616ef0e912 445 PIRSF PIRSF000709 229 409 1.3E-8 T 11-10-2018 syc1034_c 2b8860e3493a79ccc00a9e616ef0e912 445 PIRSF PIRSF000709 1 115 1.8E-5 T 11-10-2018 syc1034_c 2b8860e3493a79ccc00a9e616ef0e912 445 PIRSF PIRSF000709 149 185 6.9 T 11-10-2018 syc1034_c 2b8860e3493a79ccc00a9e616ef0e912 445 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 231 415 4.7E-58 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 syc1034_c 2b8860e3493a79ccc00a9e616ef0e912 445 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 203 9.3E-46 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 syc1034_c 2b8860e3493a79ccc00a9e616ef0e912 445 SUPERFAMILY SSF53254 229 434 9.72E-62 T 11-10-2018 IPR029033 Histidine phosphatase superfamily syc1034_c 2b8860e3493a79ccc00a9e616ef0e912 445 SMART SM00855 4 170 7.3E-21 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 syc1034_c 2b8860e3493a79ccc00a9e616ef0e912 445 SMART SM00855 230 386 3.0E-22 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 syc1034_c 2b8860e3493a79ccc00a9e616ef0e912 445 Gene3D G3DSA:3.40.50.1240 229 442 5.1E-64 T 11-10-2018 IPR029033 Histidine phosphatase superfamily syc1034_c 2b8860e3493a79ccc00a9e616ef0e912 445 Gene3D G3DSA:3.40.50.1240 2 224 1.4E-54 T 11-10-2018 IPR029033 Histidine phosphatase superfamily syc1034_c 2b8860e3493a79ccc00a9e616ef0e912 445 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 233 242 - T 11-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 syc1034_c 2b8860e3493a79ccc00a9e616ef0e912 445 SUPERFAMILY SSF53254 3 220 1.41E-51 T 11-10-2018 IPR029033 Histidine phosphatase superfamily syc2311_d 7dc8f0d5310bf8f757570b95ca4982c8 430 Gene3D G3DSA:3.40.50.1100 117 213 3.3E-108 T 11-10-2018 syc2311_d 7dc8f0d5310bf8f757570b95ca4982c8 430 TIGRFAM TIGR00260 thrC: threonine synthase 64 391 3.8E-102 T 11-10-2018 IPR004450 Threonine synthase-like syc2311_d 7dc8f0d5310bf8f757570b95ca4982c8 430 Gene3D G3DSA:3.40.50.1100 66 390 3.3E-108 T 11-10-2018 syc2311_d 7dc8f0d5310bf8f757570b95ca4982c8 430 SUPERFAMILY SSF53686 7 418 2.62E-90 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme syc2311_d 7dc8f0d5310bf8f757570b95ca4982c8 430 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 82 384 1.9E-70 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme syc0054_d 3d3277c68e29524f88576245c0927859 213 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 133 143 - T 11-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 syc0054_d 3d3277c68e29524f88576245c0927859 213 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 85 101 - T 11-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 syc0054_d 3d3277c68e29524f88576245c0927859 213 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 24 206 42.033 T 11-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 syc0054_d 3d3277c68e29524f88576245c0927859 213 SUPERFAMILY SSF55620 10 207 4.97E-86 T 11-10-2018 syc0054_d 3d3277c68e29524f88576245c0927859 213 Gene3D G3DSA:1.10.286.10 22 75 3.9E-22 T 11-10-2018 syc0054_d 3d3277c68e29524f88576245c0927859 213 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 28 207 5.3E-89 T 11-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 syc0054_d 3d3277c68e29524f88576245c0927859 213 Gene3D G3DSA:3.30.1130.10 76 206 6.4E-66 T 11-10-2018 syc0054_d 3d3277c68e29524f88576245c0927859 213 Pfam PF01227 GTP cyclohydrolase I 28 205 1.2E-80 T 11-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 syc0890_d d1c319e392d1a4c34aed1d9e7f54d98f 209 PRINTS PR00338 Transcription termination factor NUSG signature 184 200 1.9E-19 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 syc0890_d d1c319e392d1a4c34aed1d9e7f54d98f 209 PRINTS PR00338 Transcription termination factor NUSG signature 80 92 1.9E-19 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 syc0890_d d1c319e392d1a4c34aed1d9e7f54d98f 209 PRINTS PR00338 Transcription termination factor NUSG signature 166 181 1.9E-19 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 syc0890_d d1c319e392d1a4c34aed1d9e7f54d98f 209 Pfam PF02357 Transcription termination factor nusG 26 139 1.6E-20 T 11-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 syc0890_d d1c319e392d1a4c34aed1d9e7f54d98f 209 Gene3D G3DSA:3.30.70.940 20 148 1.3E-33 T 11-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 syc0890_d d1c319e392d1a4c34aed1d9e7f54d98f 209 Pfam PF00467 KOW motif 158 182 1.3E-5 T 11-10-2018 IPR005824 KOW syc0890_d d1c319e392d1a4c34aed1d9e7f54d98f 209 ProSitePatterns PS01014 Transcription termination factor nusG signature. 191 200 - T 11-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site syc0890_d d1c319e392d1a4c34aed1d9e7f54d98f 209 Gene3D G3DSA:2.30.30.30 149 207 5.1E-23 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 syc0890_d d1c319e392d1a4c34aed1d9e7f54d98f 209 SMART SM00739 154 181 4.4E-5 T 11-10-2018 IPR005824 KOW syc0890_d d1c319e392d1a4c34aed1d9e7f54d98f 209 SUPERFAMILY SSF50104 138 208 7.74E-17 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily syc0890_d d1c319e392d1a4c34aed1d9e7f54d98f 209 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 27 207 9.7E-60 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 syc0890_d d1c319e392d1a4c34aed1d9e7f54d98f 209 SUPERFAMILY SSF82679 25 146 1.83E-31 T 11-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 syc0890_d d1c319e392d1a4c34aed1d9e7f54d98f 209 SMART SM00738 24 144 4.9E-42 T 11-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 syc0890_d d1c319e392d1a4c34aed1d9e7f54d98f 209 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 24 208 22.2 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 syc0431_d 925f70e911111804f8c8fbe5cdd97948 507 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 374 482 8.5E-29 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 syc0431_d 925f70e911111804f8c8fbe5cdd97948 507 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 65 75 - T 11-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 syc0431_d 925f70e911111804f8c8fbe5cdd97948 507 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 29 346 5.3E-58 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 syc0431_d 925f70e911111804f8c8fbe5cdd97948 507 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 31 50 5.8E-27 T 11-10-2018 syc0431_d 925f70e911111804f8c8fbe5cdd97948 507 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 160 178 5.8E-27 T 11-10-2018 syc0431_d 925f70e911111804f8c8fbe5cdd97948 507 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 199 217 5.8E-27 T 11-10-2018 syc0431_d 925f70e911111804f8c8fbe5cdd97948 507 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 286 302 5.8E-27 T 11-10-2018 syc0431_d 925f70e911111804f8c8fbe5cdd97948 507 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 315 337 5.8E-27 T 11-10-2018 syc0431_d 925f70e911111804f8c8fbe5cdd97948 507 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 163 172 4.0E-59 T 11-10-2018 syc0431_d 925f70e911111804f8c8fbe5cdd97948 507 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 330 337 4.0E-59 T 11-10-2018 syc0431_d 925f70e911111804f8c8fbe5cdd97948 507 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 30 52 4.0E-59 T 11-10-2018 syc0431_d 925f70e911111804f8c8fbe5cdd97948 507 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 435 450 4.0E-59 T 11-10-2018 syc0431_d 925f70e911111804f8c8fbe5cdd97948 507 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 64 79 4.0E-59 T 11-10-2018 syc0431_d 925f70e911111804f8c8fbe5cdd97948 507 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 287 301 4.0E-59 T 11-10-2018 syc0431_d 925f70e911111804f8c8fbe5cdd97948 507 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 457 477 4.0E-59 T 11-10-2018 syc0431_d 925f70e911111804f8c8fbe5cdd97948 507 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 199 224 4.0E-59 T 11-10-2018 syc0431_d 925f70e911111804f8c8fbe5cdd97948 507 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 370 391 4.0E-59 T 11-10-2018 syc0431_d 925f70e911111804f8c8fbe5cdd97948 507 Gene3D G3DSA:3.30.390.30 373 494 1.6E-38 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 syc0431_d 925f70e911111804f8c8fbe5cdd97948 507 Gene3D G3DSA:3.50.50.60 29 356 2.6E-102 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc0431_d 925f70e911111804f8c8fbe5cdd97948 507 PIRSF PIRSF000350 14 492 4.0E-107 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 syc0431_d 925f70e911111804f8c8fbe5cdd97948 507 SUPERFAMILY SSF55424 373 491 8.76E-33 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 syc0431_d 925f70e911111804f8c8fbe5cdd97948 507 Gene3D G3DSA:3.50.50.60 172 293 2.6E-102 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc0431_d 925f70e911111804f8c8fbe5cdd97948 507 SUPERFAMILY SSF51905 28 350 2.75E-53 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc1851_c 542519c5a55dc32a0d678b421c471831 882 Gene3D G3DSA:1.10.1420.10 439 574 3.6E-97 T 11-10-2018 syc1851_c 542519c5a55dc32a0d678b421c471831 882 Gene3D G3DSA:1.10.1420.10 304 599 3.6E-97 T 11-10-2018 syc1851_c 542519c5a55dc32a0d678b421c471831 882 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 730 746 - T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 syc1851_c 542519c5a55dc32a0d678b421c471831 882 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 28 876 24.342 T 11-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 syc1851_c 542519c5a55dc32a0d678b421c471831 882 Pfam PF05192 MutS domain III 307 598 1.6E-43 T 11-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 syc1851_c 542519c5a55dc32a0d678b421c471831 882 Gene3D G3DSA:3.40.50.300 608 874 2.0E-98 T 11-10-2018 syc1851_c 542519c5a55dc32a0d678b421c471831 882 Gene3D G3DSA:3.30.420.110 150 298 7.6E-35 T 11-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 syc1851_c 542519c5a55dc32a0d678b421c471831 882 Pfam PF00488 MutS domain V 653 839 5.2E-83 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 syc1851_c 542519c5a55dc32a0d678b421c471831 882 SUPERFAMILY SSF55271 25 138 1.26E-37 T 11-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 syc1851_c 542519c5a55dc32a0d678b421c471831 882 Pfam PF01624 MutS domain I 29 142 1.9E-39 T 11-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 syc1851_c 542519c5a55dc32a0d678b421c471831 882 Gene3D G3DSA:3.40.1170.10 18 144 6.3E-44 T 11-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 syc1851_c 542519c5a55dc32a0d678b421c471831 882 SUPERFAMILY SSF48334 305 605 1.31E-89 T 11-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily syc1851_c 542519c5a55dc32a0d678b421c471831 882 PIRSF PIRSF037677 21 873 4.2E-163 T 11-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 syc1851_c 542519c5a55dc32a0d678b421c471831 882 SMART SM00533 322 630 4.0E-103 T 11-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 syc1851_c 542519c5a55dc32a0d678b421c471831 882 SUPERFAMILY SSF52540 606 840 3.06E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc1851_c 542519c5a55dc32a0d678b421c471831 882 Pfam PF05188 MutS domain II 151 289 3.5E-22 T 11-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 syc1851_c 542519c5a55dc32a0d678b421c471831 882 SMART SM00534 649 836 1.0E-116 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 syc1851_c 542519c5a55dc32a0d678b421c471831 882 Pfam PF05190 MutS family domain IV 470 557 9.7E-27 T 11-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 syc1851_c 542519c5a55dc32a0d678b421c471831 882 SUPERFAMILY SSF53150 140 317 8.24E-42 T 11-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 syc1851_c 542519c5a55dc32a0d678b421c471831 882 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 28 855 2.6E-287 T 11-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 syc0453_d 99e8448fdb3b2a84a575065296f4cc5f 456 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 15 436 1.4E-215 T 11-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 syc0453_d 99e8448fdb3b2a84a575065296f4cc5f 456 Pfam PF01964 Radical SAM ThiC family 16 435 1.3E-192 T 11-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 syc0453_d 99e8448fdb3b2a84a575065296f4cc5f 456 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 15 444 93.173 T 11-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 syc0453_d 99e8448fdb3b2a84a575065296f4cc5f 456 Gene3D G3DSA:3.20.20.540 58 373 3.3E-144 T 11-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 syc0311_d c9aaf3ff82906fddbaa2b4c3f32ce234 443 Gene3D G3DSA:3.40.190.10 152 429 6.3E-133 T 11-10-2018 syc0311_d c9aaf3ff82906fddbaa2b4c3f32ce234 443 Gene3D G3DSA:3.40.190.10 58 424 6.3E-133 T 11-10-2018 syc0311_d c9aaf3ff82906fddbaa2b4c3f32ce234 443 SUPERFAMILY SSF53850 58 305 1.45E-23 T 11-10-2018 syc0311_d c9aaf3ff82906fddbaa2b4c3f32ce234 443 Pfam PF13379 NMT1-like family 51 310 4.9E-98 T 11-10-2018 syc0727_c 3e74b263adaef09aa7ed09f2d51a15cd 306 Gene3D G3DSA:1.10.287.110 11 112 2.2E-12 T 11-10-2018 IPR036869 Chaperone J-domain superfamily syc0727_c 3e74b263adaef09aa7ed09f2d51a15cd 306 SUPERFAMILY SSF48452 199 276 9.87E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc0727_c 3e74b263adaef09aa7ed09f2d51a15cd 306 SUPERFAMILY SSF46565 9 80 2.36E-15 T 11-10-2018 IPR036869 Chaperone J-domain superfamily syc0727_c 3e74b263adaef09aa7ed09f2d51a15cd 306 Gene3D G3DSA:1.25.40.10 191 283 1.1E-13 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc0727_c 3e74b263adaef09aa7ed09f2d51a15cd 306 PRINTS PR00625 DnaJ domain signature 19 37 5.4E-6 T 11-10-2018 IPR001623 DnaJ domain syc0727_c 3e74b263adaef09aa7ed09f2d51a15cd 306 PRINTS PR00625 DnaJ domain signature 60 80 5.4E-6 T 11-10-2018 IPR001623 DnaJ domain syc0727_c 3e74b263adaef09aa7ed09f2d51a15cd 306 PRINTS PR00625 DnaJ domain signature 37 52 5.4E-6 T 11-10-2018 IPR001623 DnaJ domain syc0727_c 3e74b263adaef09aa7ed09f2d51a15cd 306 SMART SM00028 235 268 0.0012 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc0727_c 3e74b263adaef09aa7ed09f2d51a15cd 306 SMART SM00028 201 234 52.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc0727_c 3e74b263adaef09aa7ed09f2d51a15cd 306 SMART SM00271 16 80 1.4E-11 T 11-10-2018 IPR001623 DnaJ domain syc0727_c 3e74b263adaef09aa7ed09f2d51a15cd 306 Pfam PF00226 DnaJ domain 17 80 4.0E-9 T 11-10-2018 IPR001623 DnaJ domain syc0727_c 3e74b263adaef09aa7ed09f2d51a15cd 306 Pfam PF13181 Tetratricopeptide repeat 236 268 0.0012 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc0130_c 90c0b0b0c01d7a392c5a871f54e276f8 472 ProSitePatterns PS00157 Ribulose bisphosphate carboxylase large chain active site. 193 201 - T 11-10-2018 IPR020878 Ribulose bisphosphate carboxylase, large chain, active site GO:0000287|GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 syc0130_c 90c0b0b0c01d7a392c5a871f54e276f8 472 Pfam PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain 151 459 4.0E-132 T 11-10-2018 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 syc0130_c 90c0b0b0c01d7a392c5a871f54e276f8 472 Pfam PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain 21 140 5.0E-45 T 11-10-2018 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 syc0130_c 90c0b0b0c01d7a392c5a871f54e276f8 472 Hamap MF_01338 Ribulose bisphosphate carboxylase large chain [rbcL]. 6 472 60.151 T 11-10-2018 IPR020888 Ribulose bisphosphate carboxylase large subunit, type I GO:0000287|GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 syc0130_c 90c0b0b0c01d7a392c5a871f54e276f8 472 SUPERFAMILY SSF51649 145 471 1.96E-150 T 11-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 syc0130_c 90c0b0b0c01d7a392c5a871f54e276f8 472 Gene3D G3DSA:3.30.70.150 19 145 2.3E-55 T 11-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 syc0130_c 90c0b0b0c01d7a392c5a871f54e276f8 472 Gene3D G3DSA:3.20.20.110 147 472 1.3E-154 T 11-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 syc0130_c 90c0b0b0c01d7a392c5a871f54e276f8 472 SUPERFAMILY SSF54966 7 146 4.58E-60 T 11-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 syc2509_d 71ad47c4b69dad33e655f4358e508f34 1318 Gene3D G3DSA:1.10.132.30 60 197 1.6E-60 T 11-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 syc2509_d 71ad47c4b69dad33e655f4358e508f34 1318 SUPERFAMILY SSF64484 10 1239 8.7E-202 T 11-10-2018 syc2509_d 71ad47c4b69dad33e655f4358e508f34 1318 Pfam PF04998 RNA polymerase Rpb1, domain 5 173 587 3.3E-44 T 11-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 syc2509_d 71ad47c4b69dad33e655f4358e508f34 1318 Gene3D G3DSA:1.10.150.390 1189 1248 5.8E-30 T 11-10-2018 syc2509_d 71ad47c4b69dad33e655f4358e508f34 1318 Gene3D G3DSA:1.10.274.100 2 59 1.7E-13 T 11-10-2018 syc2509_d 71ad47c4b69dad33e655f4358e508f34 1318 Hamap MF_01324 DNA-directed RNA polymerase subunit beta' [rpoC2]. 7 1285 11.57 T 11-10-2018 IPR012756 DNA-directed RNA polymerase, subunit beta'' GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 syc2509_d 71ad47c4b69dad33e655f4358e508f34 1318 Pfam PF05000 RNA polymerase Rpb1, domain 4 92 161 2.7E-16 T 11-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 syc2509_d 71ad47c4b69dad33e655f4358e508f34 1318 Pfam PF04998 RNA polymerase Rpb1, domain 5 1099 1188 1.7E-10 T 11-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 syc2509_d 71ad47c4b69dad33e655f4358e508f34 1318 Pfam PF04983 RNA polymerase Rpb1, domain 3 11 63 9.2E-8 T 11-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 syc2509_d 71ad47c4b69dad33e655f4358e508f34 1318 Gene3D G3DSA:2.40.50.100 1008 1071 3.0E-61 T 11-10-2018 syc2509_d 71ad47c4b69dad33e655f4358e508f34 1318 Gene3D G3DSA:1.10.1790.20 993 1187 3.0E-61 T 11-10-2018 syc2509_d 71ad47c4b69dad33e655f4358e508f34 1318 TIGRFAM TIGR02388 rpoC2_cyan: DNA-directed RNA polymerase, beta'' subunit 9 1241 0.0 T 11-10-2018 IPR012756 DNA-directed RNA polymerase, subunit beta'' GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 syc1413_d bce193cf8aa2855ff092be81bcb8f206 203 Gene3D G3DSA:3.40.1410.10 35 193 2.7E-42 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily syc1413_d bce193cf8aa2855ff092be81bcb8f206 203 SUPERFAMILY SSF64288 37 190 2.2E-42 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily syc1413_d bce193cf8aa2855ff092be81bcb8f206 203 Pfam PF01947 Protein of unknown function (DUF98) 45 194 2.8E-62 T 11-10-2018 IPR002800 Chorismate pyruvate-lyase Rv2949c-like syc2374_d 55eb3c5ff1e54f394eac5d683d7e2aab 435 PIRSF PIRSF000139 11 435 3.8E-135 T 11-10-2018 syc2374_d 55eb3c5ff1e54f394eac5d683d7e2aab 435 Pfam PF02754 Cysteine-rich domain 192 273 2.7E-15 T 11-10-2018 IPR004017 Cysteine-rich domain syc2374_d 55eb3c5ff1e54f394eac5d683d7e2aab 435 Pfam PF02754 Cysteine-rich domain 322 407 1.5E-15 T 11-10-2018 IPR004017 Cysteine-rich domain syc2374_d 55eb3c5ff1e54f394eac5d683d7e2aab 435 SUPERFAMILY SSF46548 18 102 2.3E-20 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 syc2374_d 55eb3c5ff1e54f394eac5d683d7e2aab 435 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 72 83 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site syc2374_d 55eb3c5ff1e54f394eac5d683d7e2aab 435 Pfam PF13183 4Fe-4S dicluster domain 19 86 8.9E-12 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain syc2374_d 55eb3c5ff1e54f394eac5d683d7e2aab 435 Gene3D G3DSA:1.10.1060.10 12 106 3.1E-9 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 syc1247_d cdca08dcc5456fd225b52e0c1dd95f1b 195 ProSitePatterns PS00636 Nt-dnaJ domain signature. 59 78 - T 11-10-2018 IPR018253 DnaJ domain, conserved site syc1247_d cdca08dcc5456fd225b52e0c1dd95f1b 195 Gene3D G3DSA:1.10.287.110 3 96 1.9E-23 T 11-10-2018 IPR036869 Chaperone J-domain superfamily syc1247_d cdca08dcc5456fd225b52e0c1dd95f1b 195 Pfam PF00226 DnaJ domain 16 79 2.4E-20 T 11-10-2018 IPR001623 DnaJ domain syc1247_d cdca08dcc5456fd225b52e0c1dd95f1b 195 PRINTS PR00625 DnaJ domain signature 54 74 5.8E-13 T 11-10-2018 IPR001623 DnaJ domain syc1247_d cdca08dcc5456fd225b52e0c1dd95f1b 195 PRINTS PR00625 DnaJ domain signature 18 36 5.8E-13 T 11-10-2018 IPR001623 DnaJ domain syc1247_d cdca08dcc5456fd225b52e0c1dd95f1b 195 PRINTS PR00625 DnaJ domain signature 36 51 5.8E-13 T 11-10-2018 IPR001623 DnaJ domain syc1247_d cdca08dcc5456fd225b52e0c1dd95f1b 195 SUPERFAMILY SSF46565 10 83 4.71E-22 T 11-10-2018 IPR036869 Chaperone J-domain superfamily syc1247_d cdca08dcc5456fd225b52e0c1dd95f1b 195 SMART SM00271 15 74 3.6E-20 T 11-10-2018 IPR001623 DnaJ domain syc1257_c e5b6f5895807c71508cc2fe9d8ce53d0 375 Pfam PF07687 Peptidase dimerisation domain 195 286 4.3E-8 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain syc1257_c e5b6f5895807c71508cc2fe9d8ce53d0 375 SUPERFAMILY SSF55031 190 307 4.71E-31 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain syc1257_c e5b6f5895807c71508cc2fe9d8ce53d0 375 SUPERFAMILY SSF53187 11 361 1.04E-70 T 11-10-2018 syc1257_c e5b6f5895807c71508cc2fe9d8ce53d0 375 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 23 363 7.9E-107 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 syc1257_c e5b6f5895807c71508cc2fe9d8ce53d0 375 Gene3D G3DSA:3.30.70.360 190 304 3.2E-128 T 11-10-2018 syc1257_c e5b6f5895807c71508cc2fe9d8ce53d0 375 Gene3D G3DSA:3.40.630.10 23 363 3.2E-128 T 11-10-2018 syc1257_c e5b6f5895807c71508cc2fe9d8ce53d0 375 PIRSF PIRSF005962 9 366 2.1E-122 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 syc1257_c e5b6f5895807c71508cc2fe9d8ce53d0 375 Pfam PF01546 Peptidase family M20/M25/M40 81 358 7.5E-29 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 syc1883_d 8fa6237204b5dafe558e2d4de5934511 439 Hamap MF_01465 Protein translocase subunit SecY [secY]. 15 437 28.151 T 11-10-2018 IPR026593 Protein translocase subunit SecY syc1883_d 8fa6237204b5dafe558e2d4de5934511 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 372 390 1.4E-97 T 11-10-2018 syc1883_d 8fa6237204b5dafe558e2d4de5934511 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 124 147 1.4E-97 T 11-10-2018 syc1883_d 8fa6237204b5dafe558e2d4de5934511 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 28 46 1.4E-97 T 11-10-2018 syc1883_d 8fa6237204b5dafe558e2d4de5934511 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 82 102 1.4E-97 T 11-10-2018 syc1883_d 8fa6237204b5dafe558e2d4de5934511 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 406 424 1.4E-97 T 11-10-2018 syc1883_d 8fa6237204b5dafe558e2d4de5934511 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 182 205 1.4E-97 T 11-10-2018 syc1883_d 8fa6237204b5dafe558e2d4de5934511 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 317 339 1.4E-97 T 11-10-2018 syc1883_d 8fa6237204b5dafe558e2d4de5934511 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 156 181 1.4E-97 T 11-10-2018 syc1883_d 8fa6237204b5dafe558e2d4de5934511 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 275 294 1.4E-97 T 11-10-2018 syc1883_d 8fa6237204b5dafe558e2d4de5934511 439 Gene3D G3DSA:1.10.3370.10 12 433 2.4E-147 T 11-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 syc1883_d 8fa6237204b5dafe558e2d4de5934511 439 SUPERFAMILY SSF103491 10 428 1.96E-116 T 11-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 syc1883_d 8fa6237204b5dafe558e2d4de5934511 439 ProSitePatterns PS00755 Protein secY signature 1. 83 102 - T 11-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 syc1883_d 8fa6237204b5dafe558e2d4de5934511 439 PIRSF PIRSF004557 8 439 3.2E-133 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 syc1883_d 8fa6237204b5dafe558e2d4de5934511 439 Pfam PF00344 SecY translocase 84 420 3.0E-108 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 syc1883_d 8fa6237204b5dafe558e2d4de5934511 439 ProSitePatterns PS00756 Protein secY signature 2. 175 192 - T 11-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 syc1883_d 8fa6237204b5dafe558e2d4de5934511 439 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 25 433 3.5E-145 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 syc1734_d 265e727d936ac7ad0887368c44546f0c 264 SUPERFAMILY SSF51161 3 256 1.47E-64 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily syc1734_d 265e727d936ac7ad0887368c44546f0c 264 Gene3D G3DSA:2.160.10.10 2 183 1.5E-49 T 11-10-2018 syc1734_d 265e727d936ac7ad0887368c44546f0c 264 PIRSF PIRSF000456 1 263 6.4E-98 T 11-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 syc1734_d 265e727d936ac7ad0887368c44546f0c 264 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 174 255 5.0E-21 T 11-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 syc1734_d 265e727d936ac7ad0887368c44546f0c 264 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 3 28 0.0024 T 11-10-2018 IPR001451 Hexapeptide repeat syc1734_d 265e727d936ac7ad0887368c44546f0c 264 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 31 64 3.4E-7 T 11-10-2018 IPR001451 Hexapeptide repeat syc1734_d 265e727d936ac7ad0887368c44546f0c 264 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 103 137 1.5E-9 T 11-10-2018 IPR001451 Hexapeptide repeat syc1734_d 265e727d936ac7ad0887368c44546f0c 264 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 3 255 2.5E-94 T 11-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 syc1734_d 265e727d936ac7ad0887368c44546f0c 264 Gene3D G3DSA:1.20.1180.10 192 257 5.3E-18 T 11-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 syc0616_c 3fc2f9941878fcc1ba2d50ca4b0501bf 419 Gene3D G3DSA:1.25.40.10 254 398 4.3E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc0616_c 3fc2f9941878fcc1ba2d50ca4b0501bf 419 Gene3D G3DSA:1.25.40.10 119 236 1.3E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc0616_c 3fc2f9941878fcc1ba2d50ca4b0501bf 419 Pfam PF13176 Tetratricopeptide repeat 157 187 1.1E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc0616_c 3fc2f9941878fcc1ba2d50ca4b0501bf 419 SUPERFAMILY SSF48452 157 396 2.08E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc1416_c f0a08f35f37276f7caa1c72c0b4151de 240 SMART SM00849 45 207 0.0063 T 11-10-2018 IPR001279 Metallo-beta-lactamase syc1416_c f0a08f35f37276f7caa1c72c0b4151de 240 SUPERFAMILY SSF56281 26 223 6.32E-37 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like syc1416_c f0a08f35f37276f7caa1c72c0b4151de 240 Gene3D G3DSA:3.60.15.10 34 222 6.7E-15 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like syc0937_d 7c2db4b2392e00d9bed99da45d28fa11 255 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 12 247 39.447 T 11-10-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 syc0937_d 7c2db4b2392e00d9bed99da45d28fa11 255 SUPERFAMILY SSF56300 13 250 9.77E-52 T 11-10-2018 syc0937_d 7c2db4b2392e00d9bed99da45d28fa11 255 Gene3D G3DSA:3.60.21.10 3 253 5.8E-67 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like syc0937_d 7c2db4b2392e00d9bed99da45d28fa11 255 Pfam PF00149 Calcineurin-like phosphoesterase 13 199 3.6E-15 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 syc1956_d a2ee08f5a9d47f2c6caf1bc7a541ff8f 273 SUPERFAMILY SSF55347 136 245 2.18E-36 T 11-10-2018 syc1956_d a2ee08f5a9d47f2c6caf1bc7a541ff8f 273 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 5 273 27.469 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 syc1956_d a2ee08f5a9d47f2c6caf1bc7a541ff8f 273 PIRSF PIRSF000161 3 273 3.3E-79 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 syc1956_d a2ee08f5a9d47f2c6caf1bc7a541ff8f 273 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 138 270 3.1E-32 T 11-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 syc1956_d a2ee08f5a9d47f2c6caf1bc7a541ff8f 273 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 5 135 1.5E-38 T 11-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 syc1956_d a2ee08f5a9d47f2c6caf1bc7a541ff8f 273 Gene3D G3DSA:3.40.50.720 7 270 6.5E-80 T 11-10-2018 syc1956_d a2ee08f5a9d47f2c6caf1bc7a541ff8f 273 Gene3D G3DSA:3.30.360.10 137 243 6.5E-80 T 11-10-2018 syc1956_d a2ee08f5a9d47f2c6caf1bc7a541ff8f 273 SUPERFAMILY SSF51735 4 162 1.91E-42 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily syc1956_d a2ee08f5a9d47f2c6caf1bc7a541ff8f 273 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 157 174 - T 11-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 syc1956_d a2ee08f5a9d47f2c6caf1bc7a541ff8f 273 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 5 271 2.2E-89 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 syc1217_c 295491f845a3a4f80005dcdb53639c95 395 TIGRFAM TIGR00339 sopT: sulfate adenylyltransferase 10 383 4.9E-133 T 11-10-2018 IPR002650 Sulphate adenylyltransferase GO:0000103|GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 syc1217_c 295491f845a3a4f80005dcdb53639c95 395 Pfam PF14306 PUA-like domain 8 166 3.4E-56 T 11-10-2018 IPR025980 ATP-sulfurylase PUA-like domain KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 syc1217_c 295491f845a3a4f80005dcdb53639c95 395 Pfam PF01747 ATP-sulfurylase 174 384 2.4E-92 T 11-10-2018 IPR024951 Sulphate adenylyltransferase catalytic domain GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 syc1217_c 295491f845a3a4f80005dcdb53639c95 395 Gene3D G3DSA:3.10.400.10 8 165 1.0E-48 T 11-10-2018 syc1217_c 295491f845a3a4f80005dcdb53639c95 395 SUPERFAMILY SSF52374 174 385 2.13E-82 T 11-10-2018 syc1217_c 295491f845a3a4f80005dcdb53639c95 395 Hamap MF_00066 Sulfate adenylyltransferase [sat]. 31 388 52.005 T 11-10-2018 IPR020792 Sulphate adenylyltransferase, prokaryotic-type GO:0000103|GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 syc1217_c 295491f845a3a4f80005dcdb53639c95 395 SUPERFAMILY SSF88697 8 170 4.28E-54 T 11-10-2018 IPR015947 PUA-like superfamily syc1217_c 295491f845a3a4f80005dcdb53639c95 395 Gene3D G3DSA:3.40.50.620 175 386 3.3E-93 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold syc1117_c 74ac99ea682aeb1943353040ab914a12 152 Pfam PF13301 Protein of unknown function (DUF4079) 9 148 4.1E-51 T 11-10-2018 IPR025067 Protein of unknown function DUF4079 syc1511_d 8dccd7d9afb430469ead6a010382a606 117 SUPERFAMILY SSF55331 1 117 1.53E-35 T 11-10-2018 IPR014347 Tautomerase/MIF superfamily syc1511_d 8dccd7d9afb430469ead6a010382a606 117 ProDom PD004816 MACROPHAGE MIGRATION INHIBITORY FACTOR TAUTOMERASE MIF PHENYLPYRUVATE CYTOKINE RESPONSE INFLAMMATORY 34 116 3.0E-45 T 11-10-2018 IPR001398 Macrophage migration inhibitory factor syc1511_d 8dccd7d9afb430469ead6a010382a606 117 Pfam PF01187 Macrophage migration inhibitory factor (MIF) 2 117 9.1E-23 T 11-10-2018 IPR001398 Macrophage migration inhibitory factor syc1511_d 8dccd7d9afb430469ead6a010382a606 117 Gene3D G3DSA:3.30.429.10 1 117 1.0E-37 T 11-10-2018 IPR014347 Tautomerase/MIF superfamily syc1840_c 89a69aa0d50541fbe17ebb818a8858df 427 Pfam PF00155 Aminotransferase class I and II 38 412 2.8E-28 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 syc1840_c 89a69aa0d50541fbe17ebb818a8858df 427 SUPERFAMILY SSF53383 28 419 4.31E-67 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase syc1840_c 89a69aa0d50541fbe17ebb818a8858df 427 Gene3D G3DSA:3.40.640.10 4 422 6.8E-118 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 syc1958_d 1564c971f4e7b764e442255cb6b9e092 349 SMART SM00646 233 344 2.1E-39 T 11-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 syc1958_d 1564c971f4e7b764e442255cb6b9e092 349 SUPERFAMILY SSF53187 172 348 3.14E-55 T 11-10-2018 syc1958_d 1564c971f4e7b764e442255cb6b9e092 349 Gene3D G3DSA:3.40.630.40 170 349 6.3E-62 T 11-10-2018 syc1958_d 1564c971f4e7b764e442255cb6b9e092 349 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 174 344 2.3E-51 T 11-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 syc2157_d 4c66f12f623ed4866d156fd701bc580d 246 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 48 196 3.4E-63 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 syc2157_d 4c66f12f623ed4866d156fd701bc580d 246 SUPERFAMILY SSF55068 8 208 3.4E-78 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 syc2157_d 4c66f12f623ed4866d156fd701bc580d 246 Gene3D G3DSA:3.30.1060.10 7 216 8.4E-87 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 syc2157_d 4c66f12f623ed4866d156fd701bc580d 246 Pfam PF01625 Peptide methionine sulfoxide reductase 49 202 3.1E-63 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 syc2157_d 4c66f12f623ed4866d156fd701bc580d 246 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 46 207 35.558 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 syc1114_d 75e268f702dafaa41bd3842e533e0a8a 161 Gene3D G3DSA:1.10.3830.10 35 153 3.6E-35 T 11-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 syc1114_d 75e268f702dafaa41bd3842e533e0a8a 161 Pfam PF01219 Prokaryotic diacylglycerol kinase 47 148 8.0E-32 T 11-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 syc1114_d 75e268f702dafaa41bd3842e533e0a8a 161 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 101 112 - T 11-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 syc0584_d 4ec6b9c8d753ef66ac4eb5e9f457a93d 209 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 19 204 29.955 T 11-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 syc0584_d 4ec6b9c8d753ef66ac4eb5e9f457a93d 209 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 20 203 2.9E-70 T 11-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 syc0584_d 4ec6b9c8d753ef66ac4eb5e9f457a93d 209 SUPERFAMILY SSF53328 21 205 2.22E-57 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 syc0584_d 4ec6b9c8d753ef66ac4eb5e9f457a93d 209 Pfam PF00551 Formyl transferase 22 198 5.3E-52 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 syc0584_d 4ec6b9c8d753ef66ac4eb5e9f457a93d 209 Gene3D G3DSA:3.40.50.170 10 206 5.7E-71 T 11-10-2018 syc0949_c 29ee7428e9d1fb520e2118ee4e82ac71 276 Pfam PF12204 Domain of unknown function (DUF3598) 4 265 5.2E-85 T 11-10-2018 IPR022017 Domain of unknown function DUF3598 syc0949_c 29ee7428e9d1fb520e2118ee4e82ac71 276 SUPERFAMILY SSF50814 1 132 8.57E-28 T 11-10-2018 IPR012674 Calycin syc0949_c 29ee7428e9d1fb520e2118ee4e82ac71 276 Gene3D G3DSA:2.40.128.20 1 133 4.9E-41 T 11-10-2018 IPR012674 Calycin syc0949_c 29ee7428e9d1fb520e2118ee4e82ac71 276 SUPERFAMILY SSF50814 135 267 1.67E-35 T 11-10-2018 IPR012674 Calycin syc0949_c 29ee7428e9d1fb520e2118ee4e82ac71 276 Gene3D G3DSA:2.40.128.20 134 268 1.0E-38 T 11-10-2018 IPR012674 Calycin syc1669_d e6f6ae25d5d07b6676066f6c56a39e89 954 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 60 71 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 syc1669_d e6f6ae25d5d07b6676066f6c56a39e89 954 Gene3D G3DSA:1.10.730.20 652 952 4.2E-102 T 11-10-2018 syc1669_d e6f6ae25d5d07b6676066f6c56a39e89 954 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 31 650 8.7E-195 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 syc1669_d e6f6ae25d5d07b6676066f6c56a39e89 954 Gene3D G3DSA:3.90.740.10 198 411 8.0E-250 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 syc1669_d e6f6ae25d5d07b6676066f6c56a39e89 954 Gene3D G3DSA:3.40.50.620 28 641 8.0E-250 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold syc1669_d e6f6ae25d5d07b6676066f6c56a39e89 954 SUPERFAMILY SSF47323 664 951 1.57E-74 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 syc1669_d e6f6ae25d5d07b6676066f6c56a39e89 954 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 5 951 20.496 T 11-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 syc1669_d e6f6ae25d5d07b6676066f6c56a39e89 954 Pfam PF06827 Zinc finger found in FPG and IleRS 920 947 4.5E-11 T 11-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 syc1669_d e6f6ae25d5d07b6676066f6c56a39e89 954 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 564 573 2.8E-30 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 syc1669_d e6f6ae25d5d07b6676066f6c56a39e89 954 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 240 263 2.8E-30 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 syc1669_d e6f6ae25d5d07b6676066f6c56a39e89 954 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 404 419 2.8E-30 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 syc1669_d e6f6ae25d5d07b6676066f6c56a39e89 954 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 53 64 2.8E-30 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 syc1669_d e6f6ae25d5d07b6676066f6c56a39e89 954 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 530 543 2.8E-30 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 syc1669_d e6f6ae25d5d07b6676066f6c56a39e89 954 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 18 853 1.6E-304 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 syc1669_d e6f6ae25d5d07b6676066f6c56a39e89 954 Pfam PF08264 Anticodon-binding domain of tRNA 697 851 5.7E-28 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 syc1669_d e6f6ae25d5d07b6676066f6c56a39e89 954 SUPERFAMILY SSF50677 209 406 2.22E-51 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 syc1669_d e6f6ae25d5d07b6676066f6c56a39e89 954 SUPERFAMILY SSF52374 6 660 2.18E-142 T 11-10-2018 syc0066_d d75d190e1fd775aadea42423cf59f3f5 1148 Gene3D G3DSA:3.10.28.10 521 684 9.9E-23 T 11-10-2018 IPR027434 Homing endonuclease syc0066_d d75d190e1fd775aadea42423cf59f3f5 1148 Gene3D G3DSA:3.30.1620.10 153 247 1.5E-17 T 11-10-2018 syc0066_d d75d190e1fd775aadea42423cf59f3f5 1148 Pfam PF14528 LAGLIDADG-like domain 625 718 2.2E-25 T 11-10-2018 IPR004860 Homing endonuclease, LAGLIDADG GO:0004519 syc0066_d d75d190e1fd775aadea42423cf59f3f5 1148 Gene3D G3DSA:3.20.70.20 3 152 4.3E-19 T 11-10-2018 syc0066_d d75d190e1fd775aadea42423cf59f3f5 1148 Gene3D G3DSA:3.20.70.20 756 953 6.1E-23 T 11-10-2018 syc0066_d d75d190e1fd775aadea42423cf59f3f5 1148 Gene3D G3DSA:2.170.16.10 404 513 1.1E-11 T 11-10-2018 syc0066_d d75d190e1fd775aadea42423cf59f3f5 1148 PRINTS PR00379 Intein signature 625 637 1.1E-20 T 11-10-2018 IPR006142 Intein GO:0016539 syc0066_d d75d190e1fd775aadea42423cf59f3f5 1148 PRINTS PR00379 Intein signature 656 671 1.1E-20 T 11-10-2018 IPR006142 Intein GO:0016539 syc0066_d d75d190e1fd775aadea42423cf59f3f5 1148 PRINTS PR00379 Intein signature 523 535 1.1E-20 T 11-10-2018 IPR006142 Intein GO:0016539 syc0066_d d75d190e1fd775aadea42423cf59f3f5 1148 PRINTS PR00379 Intein signature 466 479 1.1E-20 T 11-10-2018 IPR006142 Intein GO:0016539 syc0066_d d75d190e1fd775aadea42423cf59f3f5 1148 PRINTS PR00379 Intein signature 756 773 1.1E-20 T 11-10-2018 IPR006142 Intein GO:0016539 syc0066_d d75d190e1fd775aadea42423cf59f3f5 1148 PRINTS PR00379 Intein signature 774 783 1.1E-20 T 11-10-2018 IPR006142 Intein GO:0016539 syc0066_d d75d190e1fd775aadea42423cf59f3f5 1148 SUPERFAMILY SSF55608 609 732 1.96E-16 T 11-10-2018 IPR027434 Homing endonuclease syc0066_d d75d190e1fd775aadea42423cf59f3f5 1148 Pfam PF14890 Intein splicing domain 452 779 3.2E-11 T 11-10-2018 syc0066_d d75d190e1fd775aadea42423cf59f3f5 1148 TIGRFAM TIGR01443 intein_Cterm: intein C-terminal splicing region 759 780 9.0E-4 T 11-10-2018 IPR030934 Intein C-terminal splicing region syc0066_d d75d190e1fd775aadea42423cf59f3f5 1148 SMART SM00306 408 508 5.0E-12 T 11-10-2018 IPR003587 Hint domain N-terminal Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 syc0066_d d75d190e1fd775aadea42423cf59f3f5 1148 SUPERFAMILY SSF51294 409 779 3.34E-43 T 11-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 syc0066_d d75d190e1fd775aadea42423cf59f3f5 1148 TIGRFAM TIGR02505 RTPR: ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent 779 1131 3.3E-130 T 11-10-2018 IPR013345 Ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent GO:0000166|GO:0004748|GO:0006260|GO:0008998|GO:0031419|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2 syc0066_d d75d190e1fd775aadea42423cf59f3f5 1148 TIGRFAM TIGR02505 RTPR: ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent 12 411 2.0E-117 T 11-10-2018 IPR013345 Ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent GO:0000166|GO:0004748|GO:0006260|GO:0008998|GO:0031419|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2 syc0066_d d75d190e1fd775aadea42423cf59f3f5 1148 SUPERFAMILY SSF51998 780 1131 8.85E-110 T 11-10-2018 syc0066_d d75d190e1fd775aadea42423cf59f3f5 1148 SUPERFAMILY SSF51998 2 411 9.16E-115 T 11-10-2018 syc1979_c 3d4e97853ed034c1f1c08b48ee5084e8 331 Gene3D G3DSA:3.40.50.2020 25 318 2.5E-124 T 11-10-2018 syc1979_c 3d4e97853ed034c1f1c08b48ee5084e8 331 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 23 330 1.8E-127 T 11-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 syc1979_c 3d4e97853ed034c1f1c08b48ee5084e8 331 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 22 331 48.604 T 11-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 syc1979_c 3d4e97853ed034c1f1c08b48ee5084e8 331 Pfam PF14572 Phosphoribosyl synthetase-associated domain 221 331 3.8E-25 T 11-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 syc1979_c 3d4e97853ed034c1f1c08b48ee5084e8 331 SMART SM01400 22 138 3.2E-75 T 11-10-2018 syc1979_c 3d4e97853ed034c1f1c08b48ee5084e8 331 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 22 138 2.2E-48 T 11-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 syc1979_c 3d4e97853ed034c1f1c08b48ee5084e8 331 SUPERFAMILY SSF53271 87 322 9.75E-65 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like syc1979_c 3d4e97853ed034c1f1c08b48ee5084e8 331 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 146 161 - T 11-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 syc1979_c 3d4e97853ed034c1f1c08b48ee5084e8 331 Gene3D G3DSA:3.40.50.2020 165 307 2.5E-124 T 11-10-2018 syc0190_d f3eb7b6c0262543151ff8cb92eebe67b 262 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 38 240 2.9E-42 T 11-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 syc0190_d f3eb7b6c0262543151ff8cb92eebe67b 262 Pfam PF01914 MarC family integral membrane protein 38 242 5.3E-44 T 11-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 syc0310_d 70237acb00fda240257f7828e5b31302 512 TIGRFAM TIGR02435 CobG: precorrin-3B synthase 65 455 9.4E-71 T 11-10-2018 IPR012798 Cobalamin (vitamin B12) biosynthesis CobG-like syc0310_d 70237acb00fda240257f7828e5b31302 512 SUPERFAMILY SSF56014 390 506 5.37E-31 T 11-10-2018 syc0310_d 70237acb00fda240257f7828e5b31302 512 PRINTS PR00397 Sirohaem Fe-binding site signature 435 453 6.6E-12 T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 syc0310_d 70237acb00fda240257f7828e5b31302 512 PRINTS PR00397 Sirohaem Fe-binding site signature 391 409 6.6E-12 T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 syc0310_d 70237acb00fda240257f7828e5b31302 512 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 435 451 - T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 syc0310_d 70237acb00fda240257f7828e5b31302 512 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 134 292 2.7E-44 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 syc0310_d 70237acb00fda240257f7828e5b31302 512 Gene3D G3DSA:3.90.480.20 11 379 5.8E-154 T 11-10-2018 syc0310_d 70237acb00fda240257f7828e5b31302 512 Gene3D G3DSA:3.30.413.10 126 308 5.8E-154 T 11-10-2018 syc0310_d 70237acb00fda240257f7828e5b31302 512 SUPERFAMILY SSF55124 303 376 6.54E-21 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 syc0310_d 70237acb00fda240257f7828e5b31302 512 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 391 499 8.4E-13 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 syc0310_d 70237acb00fda240257f7828e5b31302 512 Gene3D G3DSA:3.30.413.10 389 512 4.1E-41 T 11-10-2018 syc0310_d 70237acb00fda240257f7828e5b31302 512 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 63 124 5.0E-16 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 syc0310_d 70237acb00fda240257f7828e5b31302 512 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 313 376 7.2E-20 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 syc0310_d 70237acb00fda240257f7828e5b31302 512 SUPERFAMILY SSF55124 16 133 2.94E-26 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 syc0310_d 70237acb00fda240257f7828e5b31302 512 SUPERFAMILY SSF56014 134 306 1.74E-43 T 11-10-2018 syc2517_d 93cdd0579753cd160aa2a93e9fb3be29 271 Gene3D G3DSA:3.40.190.10 122 229 8.6E-74 T 11-10-2018 syc2517_d 93cdd0579753cd160aa2a93e9fb3be29 271 Pfam PF13531 Bacterial extracellular solute-binding protein 43 266 7.6E-48 T 11-10-2018 syc2517_d 93cdd0579753cd160aa2a93e9fb3be29 271 Gene3D G3DSA:3.40.190.10 45 266 8.6E-74 T 11-10-2018 syc2517_d 93cdd0579753cd160aa2a93e9fb3be29 271 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 48 265 5.9E-62 T 11-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 syc2517_d 93cdd0579753cd160aa2a93e9fb3be29 271 SUPERFAMILY SSF53850 42 268 8.16E-64 T 11-10-2018 syc2517_d 93cdd0579753cd160aa2a93e9fb3be29 271 PIRSF PIRSF004846 10 270 8.1E-78 T 11-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 syc0837_d 990842c0af74aa3c7030216e0fc28b29 261 Pfam PF13419 Haloacid dehalogenase-like hydrolase 122 222 9.1E-17 T 11-10-2018 syc0837_d 990842c0af74aa3c7030216e0fc28b29 261 SUPERFAMILY SSF56784 19 246 8.41E-36 T 11-10-2018 IPR036412 HAD-like superfamily syc0837_d 990842c0af74aa3c7030216e0fc28b29 261 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 115 221 4.8E-8 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 syc0837_d 990842c0af74aa3c7030216e0fc28b29 261 Gene3D G3DSA:3.40.50.1000 23 229 2.1E-30 T 11-10-2018 IPR023214 HAD superfamily syc0837_d 990842c0af74aa3c7030216e0fc28b29 261 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 138 217 1.3E-8 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 syc0837_d 990842c0af74aa3c7030216e0fc28b29 261 Gene3D G3DSA:1.10.150.240 34 121 2.1E-30 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 syc1644_d e2671d44ca81b99dcc4bd55c559dae4e 424 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 187 201 1.3E-17 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 syc1644_d e2671d44ca81b99dcc4bd55c559dae4e 424 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 233 246 1.3E-17 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 syc1644_d e2671d44ca81b99dcc4bd55c559dae4e 424 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 72 88 1.3E-17 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 syc1644_d e2671d44ca81b99dcc4bd55c559dae4e 424 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 139 151 - T 11-10-2018 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-4655427|Reactome: R-HSA-5334118 syc1644_d e2671d44ca81b99dcc4bd55c559dae4e 424 Pfam PF00145 C-5 cytosine-specific DNA methylase 71 405 6.0E-84 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 syc1644_d e2671d44ca81b99dcc4bd55c559dae4e 424 Gene3D G3DSA:3.40.50.150 72 399 4.4E-92 T 11-10-2018 syc1644_d e2671d44ca81b99dcc4bd55c559dae4e 424 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 387 405 - T 11-10-2018 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 syc1644_d e2671d44ca81b99dcc4bd55c559dae4e 424 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 73 404 1.1E-94 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 syc1644_d e2671d44ca81b99dcc4bd55c559dae4e 424 Gene3D G3DSA:3.90.120.10 262 368 4.4E-92 T 11-10-2018 syc1644_d e2671d44ca81b99dcc4bd55c559dae4e 424 SUPERFAMILY SSF53335 66 407 4.02E-83 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase syc1022_c b18ddd9fc93af71795323339c29ba47f 837 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 637 744 3.5E-5 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 syc1022_c b18ddd9fc93af71795323339c29ba47f 837 Gene3D G3DSA:3.40.120.10 548 734 1.2E-30 T 11-10-2018 syc1022_c b18ddd9fc93af71795323339c29ba47f 837 SUPERFAMILY SSF55957 748 831 8.37E-7 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 syc1022_c b18ddd9fc93af71795323339c29ba47f 837 SUPERFAMILY SSF53738 380 518 1.12E-21 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 syc1022_c b18ddd9fc93af71795323339c29ba47f 837 Gene3D G3DSA:2.160.10.10 246 375 4.6E-19 T 11-10-2018 syc1022_c b18ddd9fc93af71795323339c29ba47f 837 SUPERFAMILY SSF53448 1 279 2.92E-68 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases syc1022_c b18ddd9fc93af71795323339c29ba47f 837 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 536 631 7.2E-9 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 syc1022_c b18ddd9fc93af71795323339c29ba47f 837 SUPERFAMILY SSF51161 241 428 8.18E-28 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily syc1022_c b18ddd9fc93af71795323339c29ba47f 837 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 268 300 2.3E-5 T 11-10-2018 IPR001451 Hexapeptide repeat syc1022_c b18ddd9fc93af71795323339c29ba47f 837 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 383 513 4.6E-18 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 syc1022_c b18ddd9fc93af71795323339c29ba47f 837 Gene3D G3DSA:3.40.120.10 632 738 1.2E-30 T 11-10-2018 syc1022_c b18ddd9fc93af71795323339c29ba47f 837 SUPERFAMILY SSF53738 532 631 1.92E-9 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 syc1022_c b18ddd9fc93af71795323339c29ba47f 837 Gene3D G3DSA:3.40.120.10 382 530 1.2E-22 T 11-10-2018 syc1022_c b18ddd9fc93af71795323339c29ba47f 837 Gene3D G3DSA:3.90.550.10 1 245 1.7E-64 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases syc1022_c b18ddd9fc93af71795323339c29ba47f 837 SUPERFAMILY SSF53738 635 742 1.18E-16 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 syc1022_c b18ddd9fc93af71795323339c29ba47f 837 Pfam PF00483 Nucleotidyl transferase 3 231 3.9E-46 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 syc1253_d c2cf33cd8ab46776f094df873769b8a3 839 SUPERFAMILY SSF52540 503 821 4.87E-80 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc1253_d c2cf33cd8ab46776f094df873769b8a3 839 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 735 815 3.6E-24 T 11-10-2018 IPR019489 Clp ATPase, C-terminal syc1253_d c2cf33cd8ab46776f094df873769b8a3 839 Pfam PF02151 UvrB/uvrC motif 431 466 1.1E-6 T 11-10-2018 IPR001943 UVR domain GO:0005515 syc1253_d c2cf33cd8ab46776f094df873769b8a3 839 SUPERFAMILY SSF52540 175 452 4.44E-75 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc1253_d c2cf33cd8ab46776f094df873769b8a3 839 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 309 321 - T 11-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 syc1253_d c2cf33cd8ab46776f094df873769b8a3 839 Gene3D G3DSA:3.40.50.300 485 733 5.7E-98 T 11-10-2018 syc1253_d c2cf33cd8ab46776f094df873769b8a3 839 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 588 606 - T 11-10-2018 IPR028299 ClpA/B, conserved site 2 syc1253_d c2cf33cd8ab46776f094df873769b8a3 839 SUPERFAMILY SSF81923 18 152 2.09E-31 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 syc1253_d c2cf33cd8ab46776f094df873769b8a3 839 SMART SM01086 735 825 3.6E-33 T 11-10-2018 IPR019489 Clp ATPase, C-terminal syc1253_d c2cf33cd8ab46776f094df873769b8a3 839 Pfam PF07724 AAA domain (Cdc48 subfamily) 553 729 4.0E-55 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 syc1253_d c2cf33cd8ab46776f094df873769b8a3 839 Gene3D G3DSA:1.10.1780.10 15 164 4.3E-61 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 syc1253_d c2cf33cd8ab46776f094df873769b8a3 839 Gene3D G3DSA:3.40.50.300 167 357 2.4E-71 T 11-10-2018 syc1253_d c2cf33cd8ab46776f094df873769b8a3 839 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 632 650 1.0E-40 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 syc1253_d c2cf33cd8ab46776f094df873769b8a3 839 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 665 679 1.0E-40 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 syc1253_d c2cf33cd8ab46776f094df873769b8a3 839 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 603 621 1.0E-40 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 syc1253_d c2cf33cd8ab46776f094df873769b8a3 839 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 558 576 1.0E-40 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 syc1253_d c2cf33cd8ab46776f094df873769b8a3 839 SMART SM00382 214 358 2.1E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain syc1253_d c2cf33cd8ab46776f094df873769b8a3 839 SMART SM00382 554 736 2.7E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain syc1253_d c2cf33cd8ab46776f094df873769b8a3 839 Gene3D G3DSA:3.40.50.300 358 481 4.4E-39 T 11-10-2018 syc1253_d c2cf33cd8ab46776f094df873769b8a3 839 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 31 83 1.7E-17 T 11-10-2018 IPR004176 Clp, N-terminal syc1253_d c2cf33cd8ab46776f094df873769b8a3 839 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 107 158 5.8E-20 T 11-10-2018 IPR004176 Clp, N-terminal syc1253_d c2cf33cd8ab46776f094df873769b8a3 839 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 219 346 8.2E-13 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 syc1253_d c2cf33cd8ab46776f094df873769b8a3 839 Gene3D G3DSA:1.10.8.60 735 835 1.2E-27 T 11-10-2018 syc2454_d d30e62fac1c070c74cc7ce231a598a2c 202 SUPERFAMILY SSF46565 1 39 1.7E-8 T 11-10-2018 IPR036869 Chaperone J-domain superfamily syc2454_d d30e62fac1c070c74cc7ce231a598a2c 202 Gene3D G3DSA:1.10.287.110 1 77 3.8E-8 T 11-10-2018 IPR036869 Chaperone J-domain superfamily syc2454_d d30e62fac1c070c74cc7ce231a598a2c 202 Pfam PF00226 DnaJ domain 1 36 6.7E-7 T 11-10-2018 IPR001623 DnaJ domain syc2408_c 1235c9751e2c00a54b2d06534a20586d 278 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 79 273 1.3E-21 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 syc2408_c 1235c9751e2c00a54b2d06534a20586d 278 SUPERFAMILY SSF161098 17 269 9.35E-51 T 11-10-2018 IPR035906 MetI-like superfamily syc2408_c 1235c9751e2c00a54b2d06534a20586d 278 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 13 275 7.1E-113 T 11-10-2018 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 syc2408_c 1235c9751e2c00a54b2d06534a20586d 278 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 4 271 1.2E-117 T 11-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 syc2408_c 1235c9751e2c00a54b2d06534a20586d 278 Gene3D G3DSA:1.10.3720.10 16 277 6.6E-63 T 11-10-2018 IPR035906 MetI-like superfamily syc0463_c 48d0ec6e8d205e6bf948060f90b6a284 354 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 23 32 - T 11-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 syc0463_c 48d0ec6e8d205e6bf948060f90b6a284 354 Gene3D G3DSA:3.20.20.210 1 348 1.2E-138 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 syc0463_c 48d0ec6e8d205e6bf948060f90b6a284 354 SUPERFAMILY SSF51726 6 348 7.59E-108 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 syc0463_c 48d0ec6e8d205e6bf948060f90b6a284 354 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 9 345 7.5E-117 T 11-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 syc0463_c 48d0ec6e8d205e6bf948060f90b6a284 354 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 143 159 - T 11-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 syc0463_c 48d0ec6e8d205e6bf948060f90b6a284 354 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 7 347 45.072 T 11-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 syc0463_c 48d0ec6e8d205e6bf948060f90b6a284 354 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 10 344 7.0E-123 T 11-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 syc0167_c 78867162a1c503669263cd77869025fc 237 Pfam PF00194 Eukaryotic-type carbonic anhydrase 29 229 1.1E-34 T 11-10-2018 IPR001148 Alpha carbonic anhydrase domain syc0167_c 78867162a1c503669263cd77869025fc 237 SUPERFAMILY SSF51069 29 236 1.44E-58 T 11-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily syc0167_c 78867162a1c503669263cd77869025fc 237 Gene3D G3DSA:3.10.200.10 27 237 2.1E-60 T 11-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily syc0167_c 78867162a1c503669263cd77869025fc 237 SMART SM01057 30 237 2.9E-54 T 11-10-2018 IPR001148 Alpha carbonic anhydrase domain syc0675_c b39a8e10c155acfe31d6cd2e98fa9c15 163 Gene3D G3DSA:3.30.70.860 6 163 3.3E-59 T 11-10-2018 IPR035571 UPF0234-like, C-terminal syc0675_c b39a8e10c155acfe31d6cd2e98fa9c15 163 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 4 163 24.396 T 11-10-2018 IPR007551 Protein of unknown function DUF520 syc0675_c b39a8e10c155acfe31d6cd2e98fa9c15 163 SUPERFAMILY SSF89963 91 163 1.83E-26 T 11-10-2018 IPR036183 YajQ-like superfamily syc0675_c b39a8e10c155acfe31d6cd2e98fa9c15 163 Pfam PF04461 Protein of unknown function (DUF520) 5 163 1.3E-60 T 11-10-2018 IPR007551 Protein of unknown function DUF520 syc0675_c b39a8e10c155acfe31d6cd2e98fa9c15 163 Gene3D G3DSA:3.30.70.990 12 101 3.3E-59 T 11-10-2018 IPR035570 UPF0234, N-terminal syc0675_c b39a8e10c155acfe31d6cd2e98fa9c15 163 SUPERFAMILY SSF89963 6 90 7.59E-28 T 11-10-2018 IPR036183 YajQ-like superfamily syc1485_d eb0180f8e7500128be44b6619b2266b1 107 Gene3D G3DSA:3.30.70.60 3 101 1.6E-30 T 11-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 syc1485_d eb0180f8e7500128be44b6619b2266b1 107 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 3 97 20.159 T 11-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 syc1485_d eb0180f8e7500128be44b6619b2266b1 107 ProSitePatterns PS01048 Ribosomal protein S6 signature. 46 55 - T 11-10-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 syc1485_d eb0180f8e7500128be44b6619b2266b1 107 TIGRFAM TIGR00166 S6: ribosomal protein bS6 6 96 3.4E-24 T 11-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc1485_d eb0180f8e7500128be44b6619b2266b1 107 SUPERFAMILY SSF54995 5 96 3.14E-31 T 11-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc1485_d eb0180f8e7500128be44b6619b2266b1 107 Pfam PF01250 Ribosomal protein S6 6 94 9.8E-26 T 11-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc1752_c 9926eae81bbf572152566d800991affb 415 Hamap MF_01074 Pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel insertion protein [larC]. 15 412 41.962 T 11-10-2018 IPR002822 Nickel insertion protein syc1752_c 9926eae81bbf572152566d800991affb 415 Pfam PF01969 Protein of unknown function DUF111 18 402 1.4E-143 T 11-10-2018 IPR002822 Nickel insertion protein syc1752_c 9926eae81bbf572152566d800991affb 415 TIGRFAM TIGR00299 TIGR00299: TIGR00299 family protein 17 402 1.0E-120 T 11-10-2018 IPR002822 Nickel insertion protein syc1752_c 9926eae81bbf572152566d800991affb 415 Gene3D G3DSA:3.30.70.1380 266 352 7.2E-10 T 11-10-2018 syc1641_d 0653a345c4ec3b1558ae534468b1a357 406 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 1 400 53.121 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 syc1641_d 0653a345c4ec3b1558ae534468b1a357 406 PIRSF PIRSF000497 1 401 1.7E-158 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 syc1641_d 0653a345c4ec3b1558ae534468b1a357 406 Gene3D G3DSA:3.30.300.10 92 392 3.5E-159 T 11-10-2018 syc1641_d 0653a345c4ec3b1558ae534468b1a357 406 SUPERFAMILY SSF55973 243 398 1.81E-65 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 syc1641_d 0653a345c4ec3b1558ae534468b1a357 406 Gene3D G3DSA:3.30.300.10 137 243 3.5E-159 T 11-10-2018 syc1641_d 0653a345c4ec3b1558ae534468b1a357 406 SUPERFAMILY SSF55973 110 242 3.53E-44 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 syc1641_d 0653a345c4ec3b1558ae534468b1a357 406 SUPERFAMILY SSF55973 1 99 1.33E-36 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 syc1641_d 0653a345c4ec3b1558ae534468b1a357 406 Pfam PF02772 S-adenosylmethionine synthetase, central domain 115 241 2.2E-44 T 11-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 syc1641_d 0653a345c4ec3b1558ae534468b1a357 406 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 243 389 8.0E-66 T 11-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 syc1641_d 0653a345c4ec3b1558ae534468b1a357 406 Gene3D G3DSA:3.30.300.10 1 280 3.5E-159 T 11-10-2018 syc1641_d 0653a345c4ec3b1558ae534468b1a357 406 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 269 277 - T 11-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 syc1641_d 0653a345c4ec3b1558ae534468b1a357 406 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 1 398 4.2E-157 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 syc1641_d 0653a345c4ec3b1558ae534468b1a357 406 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 11-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 syc1641_d 0653a345c4ec3b1558ae534468b1a357 406 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 1 91 7.8E-32 T 11-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 syc2292_c 8f524e76abf93a8f0fa15eb0add6282f 238 Pfam PF12697 Alpha/beta hydrolase family 4 232 5.8E-24 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 syc2292_c 8f524e76abf93a8f0fa15eb0add6282f 238 PRINTS PR00111 Alpha/beta hydrolase fold signature 85 98 4.6E-8 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 syc2292_c 8f524e76abf93a8f0fa15eb0add6282f 238 PRINTS PR00111 Alpha/beta hydrolase fold signature 71 84 4.6E-8 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 syc2292_c 8f524e76abf93a8f0fa15eb0add6282f 238 PRINTS PR00111 Alpha/beta hydrolase fold signature 28 43 4.6E-8 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 syc2292_c 8f524e76abf93a8f0fa15eb0add6282f 238 SUPERFAMILY SSF53474 3 238 1.89E-40 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold syc2292_c 8f524e76abf93a8f0fa15eb0add6282f 238 Gene3D G3DSA:3.40.50.1820 1 238 6.3E-67 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold syc1833_c be026bee94b94e3876b0280f3f91cb9f 431 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 7 415 38.092 T 11-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 syc1833_c be026bee94b94e3876b0280f3f91cb9f 431 SUPERFAMILY SSF53720 7 415 1.35E-109 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 syc1833_c be026bee94b94e3876b0280f3f91cb9f 431 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 16 405 4.1E-164 T 11-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 syc1833_c be026bee94b94e3876b0280f3f91cb9f 431 Gene3D G3DSA:3.40.605.10 15 412 8.2E-164 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 syc1833_c be026bee94b94e3876b0280f3f91cb9f 431 Pfam PF00171 Aldehyde dehydrogenase family 11 283 1.2E-9 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 syc1833_c be026bee94b94e3876b0280f3f91cb9f 431 PIRSF PIRSF000151 3 416 1.1E-168 T 11-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 syc1833_c be026bee94b94e3876b0280f3f91cb9f 431 Gene3D G3DSA:3.40.309.10 226 373 8.2E-164 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 syc1833_c be026bee94b94e3876b0280f3f91cb9f 431 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 322 343 - T 11-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 syc0983_c c2be04d79f9e2935100b537d27445ac4 668 SMART SM00861 359 531 9.7E-65 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain syc0983_c c2be04d79f9e2935100b537d27445ac4 668 Pfam PF02780 Transketolase, C-terminal domain 551 659 9.8E-12 T 11-10-2018 IPR033248 Transketolase, C-terminal domain syc0983_c c2be04d79f9e2935100b537d27445ac4 668 Gene3D G3DSA:3.40.50.920 543 668 2.5E-46 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 syc0983_c c2be04d79f9e2935100b537d27445ac4 668 SUPERFAMILY SSF52518 10 337 1.97E-119 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold syc0983_c c2be04d79f9e2935100b537d27445ac4 668 Gene3D G3DSA:3.40.50.970 5 334 1.2E-134 T 11-10-2018 syc0983_c c2be04d79f9e2935100b537d27445ac4 668 TIGRFAM TIGR00232 tktlase_bact: transketolase 12 667 0.0 T 11-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 syc0983_c c2be04d79f9e2935100b537d27445ac4 668 ProSitePatterns PS00801 Transketolase signature 1. 17 37 - T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 syc0983_c c2be04d79f9e2935100b537d27445ac4 668 SUPERFAMILY SSF52922 537 667 5.37E-46 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 syc0983_c c2be04d79f9e2935100b537d27445ac4 668 SUPERFAMILY SSF52518 341 531 5.05E-68 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold syc0983_c c2be04d79f9e2935100b537d27445ac4 668 Gene3D G3DSA:3.40.50.970 335 540 1.0E-82 T 11-10-2018 syc0983_c c2be04d79f9e2935100b537d27445ac4 668 Pfam PF02779 Transketolase, pyrimidine binding domain 358 530 3.2E-47 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain syc0983_c c2be04d79f9e2935100b537d27445ac4 668 ProSitePatterns PS00802 Transketolase signature 2. 473 489 - T 11-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 syc0983_c c2be04d79f9e2935100b537d27445ac4 668 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 9 342 5.3E-159 T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 syc0617_d 3013f871c03cf897bee2ceff2e82c0e0 433 Gene3D G3DSA:3.40.50.20 2 95 3.6E-34 T 11-10-2018 syc0617_d 3013f871c03cf897bee2ceff2e82c0e0 433 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 288 295 - T 11-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 syc0617_d 3013f871c03cf897bee2ceff2e82c0e0 433 SUPERFAMILY SSF56059 104 319 1.56E-58 T 11-10-2018 syc0617_d 3013f871c03cf897bee2ceff2e82c0e0 433 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 331 419 1.4E-26 T 11-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 syc0617_d 3013f871c03cf897bee2ceff2e82c0e0 433 Gene3D G3DSA:3.30.470.20 190 328 5.8E-55 T 11-10-2018 syc0617_d 3013f871c03cf897bee2ceff2e82c0e0 433 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 2 421 1.8E-162 T 11-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 syc0617_d 3013f871c03cf897bee2ceff2e82c0e0 433 SUPERFAMILY SSF51246 329 421 7.46E-28 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 syc0617_d 3013f871c03cf897bee2ceff2e82c0e0 433 SUPERFAMILY SSF52440 2 102 1.44E-33 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily syc0617_d 3013f871c03cf897bee2ceff2e82c0e0 433 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 422 41.173 T 11-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 syc0617_d 3013f871c03cf897bee2ceff2e82c0e0 433 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 294 1.3E-76 T 11-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 syc0617_d 3013f871c03cf897bee2ceff2e82c0e0 433 SMART SM01210 329 422 4.0E-44 T 11-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 syc0617_d 3013f871c03cf897bee2ceff2e82c0e0 433 Gene3D G3DSA:3.90.600.10 329 432 8.8E-31 T 11-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 syc0617_d 3013f871c03cf897bee2ceff2e82c0e0 433 Gene3D G3DSA:3.30.1490.20 123 189 8.3E-23 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 syc0617_d 3013f871c03cf897bee2ceff2e82c0e0 433 SMART SM01209 103 294 3.0E-129 T 11-10-2018 syc0617_d 3013f871c03cf897bee2ceff2e82c0e0 433 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 2 102 1.1E-32 T 11-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 syc0647_c 8bf33dff59cd4936db37fccc73da2ab2 360 TIGRFAM TIGR01151 psbA: photosystem II q(b) protein 1 360 3.1E-244 T 11-10-2018 IPR005867 Photosystem II protein D1 GO:0009055 MetaCyc: PWY-101 syc0647_c 8bf33dff59cd4936db37fccc73da2ab2 360 ProSitePatterns PS00244 Photosynthetic reaction center proteins signature. 191 217 - T 11-10-2018 IPR000484 Photosynthetic reaction centre, L/M GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 syc0647_c 8bf33dff59cd4936db37fccc73da2ab2 360 Pfam PF00124 Photosynthetic reaction centre protein 28 326 5.4E-98 T 11-10-2018 IPR000484 Photosynthetic reaction centre, L/M GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 syc0647_c 8bf33dff59cd4936db37fccc73da2ab2 360 Hamap MF_01379 Photosystem II protein D1 [psbA]. 1 347 60.376 T 11-10-2018 IPR005867 Photosystem II protein D1 GO:0009055 MetaCyc: PWY-101 syc0647_c 8bf33dff59cd4936db37fccc73da2ab2 360 SUPERFAMILY SSF81483 12 343 4.58E-146 T 11-10-2018 IPR036854 Photosystem II protein D1/D2 superfamily GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 syc0647_c 8bf33dff59cd4936db37fccc73da2ab2 360 PRINTS PR00256 Bacterial photosynthetic reaction centre signature 32 53 7.3E-5 T 11-10-2018 IPR000484 Photosynthetic reaction centre, L/M GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 syc0647_c 8bf33dff59cd4936db37fccc73da2ab2 360 PRINTS PR00256 Bacterial photosynthetic reaction centre signature 197 223 7.3E-5 T 11-10-2018 IPR000484 Photosynthetic reaction centre, L/M GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 syc0647_c 8bf33dff59cd4936db37fccc73da2ab2 360 Gene3D G3DSA:1.20.85.10 142 298 4.3E-25 T 11-10-2018 IPR036854 Photosystem II protein D1/D2 superfamily GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 syc2149_d e55047d307eee1ffa95326ebb3bbbbf1 643 Pfam PF12826 Helix-hairpin-helix motif 590 640 1.8E-9 T 11-10-2018 syc2149_d e55047d307eee1ffa95326ebb3bbbbf1 643 Pfam PF02151 UvrB/uvrC motif 215 247 4.8E-11 T 11-10-2018 IPR001943 UVR domain GO:0005515 syc2149_d e55047d307eee1ffa95326ebb3bbbbf1 643 Gene3D G3DSA:1.10.150.20 578 637 1.0E-19 T 11-10-2018 syc2149_d e55047d307eee1ffa95326ebb3bbbbf1 643 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 395 571 1.1E-46 T 11-10-2018 IPR001162 UvrC family homology region syc2149_d e55047d307eee1ffa95326ebb3bbbbf1 643 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 17 472 2.2E-156 T 11-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 syc2149_d e55047d307eee1ffa95326ebb3bbbbf1 643 SUPERFAMILY SSF46600 201 251 8.76E-14 T 11-10-2018 IPR036876 UVR domain superfamily syc2149_d e55047d307eee1ffa95326ebb3bbbbf1 643 Gene3D G3DSA:4.10.860.10 213 250 1.0E-9 T 11-10-2018 syc2149_d e55047d307eee1ffa95326ebb3bbbbf1 643 Gene3D G3DSA:3.30.420.340 388 577 1.2E-52 T 11-10-2018 IPR038476 UvrC homology region 2 superfamily syc2149_d e55047d307eee1ffa95326ebb3bbbbf1 643 SUPERFAMILY SSF47781 557 638 1.75E-21 T 11-10-2018 IPR010994 RuvA domain 2-like syc2149_d e55047d307eee1ffa95326ebb3bbbbf1 643 Pfam PF01541 GIY-YIG catalytic domain 27 101 2.5E-9 T 11-10-2018 IPR000305 GIY-YIG endonuclease syc2149_d e55047d307eee1ffa95326ebb3bbbbf1 643 SUPERFAMILY SSF82771 27 110 1.7E-22 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 syc2149_d e55047d307eee1ffa95326ebb3bbbbf1 643 Gene3D G3DSA:3.40.1440.10 13 112 2.7E-34 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 syc2149_d e55047d307eee1ffa95326ebb3bbbbf1 643 SMART SM00465 26 108 7.9E-22 T 11-10-2018 IPR000305 GIY-YIG endonuclease syc2149_d e55047d307eee1ffa95326ebb3bbbbf1 643 Hamap MF_00203 UvrABC system protein C [uvrC]. 13 636 29.316 T 11-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 syc0622_d 10ee6addaeaebb030ee77f831b9513ee 84 TIGRFAM TIGR03049 PS_I_psaK: photosystem I reaction center subunit PsaK 4 84 2.9E-35 T 11-10-2018 IPR017492 Photosystem I PsaK, reaction centre GO:0009522|GO:0015979|GO:0042651 syc0622_d 10ee6addaeaebb030ee77f831b9513ee 84 Pfam PF01241 Photosystem I psaG / psaK 17 82 3.4E-17 T 11-10-2018 IPR000549 Photosystem I PsaG/PsaK protein GO:0009522|GO:0015979|GO:0016020 syc0622_d 10ee6addaeaebb030ee77f831b9513ee 84 ProSitePatterns PS01026 Photosystem I psaG and psaK proteins signature. 54 71 - T 11-10-2018 IPR000549 Photosystem I PsaG/PsaK protein GO:0009522|GO:0015979|GO:0016020 syc0622_d 10ee6addaeaebb030ee77f831b9513ee 84 Gene3D G3DSA:1.20.860.20 12 84 3.5E-28 T 11-10-2018 IPR037101 Photosystem I reaction centre subunit PsaK GO:0009522|GO:0015979|GO:0042651 syc0622_d 10ee6addaeaebb030ee77f831b9513ee 84 SUPERFAMILY SSF81563 23 78 4.18E-18 T 11-10-2018 IPR035982 Photosystem I reaction centre subunit PsaK superfamily GO:0009522|GO:0015979|GO:0016020 syc0622_d 10ee6addaeaebb030ee77f831b9513ee 84 Hamap MF_00474 Photosystem I reaction center subunit PsaK [psaK]. 13 84 21.06 T 11-10-2018 IPR017492 Photosystem I PsaK, reaction centre GO:0009522|GO:0015979|GO:0042651 syc2472_c 08683d945389a00bf17e5a134ecc6f98 82 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 5 70 1.1E-32 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor syc2472_c 08683d945389a00bf17e5a134ecc6f98 82 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 16 68 5.0E-25 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor syc2472_c 08683d945389a00bf17e5a134ecc6f98 82 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 1 69 25.686 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor syc2472_c 08683d945389a00bf17e5a134ecc6f98 82 SMART SM01234 1 68 2.4E-47 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor syc2472_c 08683d945389a00bf17e5a134ecc6f98 82 Pfam PF01809 Haemolytic domain 4 68 1.1E-31 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor syc1852_c 49af2f714d0cd08709ef038725423d2b 467 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 48 214 5.1E-19 T 11-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like syc0259_c f48cccb49fc4668a3b9c7bcb00e6c353 561 Gene3D G3DSA:2.160.20.80 419 551 5.4E-31 T 11-10-2018 syc0259_c f48cccb49fc4668a3b9c7bcb00e6c353 561 SMART SM00220 73 339 9.5E-33 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 syc0259_c f48cccb49fc4668a3b9c7bcb00e6c353 561 Pfam PF00805 Pentapeptide repeats (8 copies) 466 502 1.1E-8 T 11-10-2018 IPR001646 Pentapeptide repeat syc0259_c f48cccb49fc4668a3b9c7bcb00e6c353 561 Pfam PF00805 Pentapeptide repeats (8 copies) 504 537 9.0E-10 T 11-10-2018 IPR001646 Pentapeptide repeat syc0259_c f48cccb49fc4668a3b9c7bcb00e6c353 561 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 79 104 - T 11-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 syc0259_c f48cccb49fc4668a3b9c7bcb00e6c353 561 Gene3D G3DSA:1.10.510.10 162 333 1.8E-55 T 11-10-2018 syc0259_c f48cccb49fc4668a3b9c7bcb00e6c353 561 Pfam PF00069 Protein kinase domain 73 285 3.8E-36 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 syc0259_c f48cccb49fc4668a3b9c7bcb00e6c353 561 SUPERFAMILY SSF141571 435 553 4.32E-31 T 11-10-2018 syc0259_c f48cccb49fc4668a3b9c7bcb00e6c353 561 PIRSF PIRSF000647 40 559 2.3E-283 T 11-10-2018 IPR016252 Serine/threonine-protein kinase SpkB KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 syc0259_c f48cccb49fc4668a3b9c7bcb00e6c353 561 Gene3D G3DSA:3.30.200.20 46 161 1.8E-55 T 11-10-2018 syc0259_c f48cccb49fc4668a3b9c7bcb00e6c353 561 SUPERFAMILY SSF56112 56 343 1.31E-54 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily syc2020_c 023179592528f28fc0c6b2e1b816550f 655 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 606 1.6E-264 T 11-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 syc2020_c 023179592528f28fc0c6b2e1b816550f 655 PRINTS PR00301 70kDa heat shock protein signature 54 62 6.7E-73 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 syc2020_c 023179592528f28fc0c6b2e1b816550f 655 PRINTS PR00301 70kDa heat shock protein signature 136 156 6.7E-73 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 syc2020_c 023179592528f28fc0c6b2e1b816550f 655 PRINTS PR00301 70kDa heat shock protein signature 387 406 6.7E-73 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 syc2020_c 023179592528f28fc0c6b2e1b816550f 655 PRINTS PR00301 70kDa heat shock protein signature 332 348 6.7E-73 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 syc2020_c 023179592528f28fc0c6b2e1b816550f 655 PRINTS PR00301 70kDa heat shock protein signature 468 484 6.7E-73 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 syc2020_c 023179592528f28fc0c6b2e1b816550f 655 PRINTS PR00301 70kDa heat shock protein signature 196 206 6.7E-73 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 syc2020_c 023179592528f28fc0c6b2e1b816550f 655 PRINTS PR00301 70kDa heat shock protein signature 31 43 6.7E-73 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 syc2020_c 023179592528f28fc0c6b2e1b816550f 655 PRINTS PR00301 70kDa heat shock protein signature 3 16 6.7E-73 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 syc2020_c 023179592528f28fc0c6b2e1b816550f 655 PRINTS PR00301 70kDa heat shock protein signature 364 384 6.7E-73 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 syc2020_c 023179592528f28fc0c6b2e1b816550f 655 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 syc2020_c 023179592528f28fc0c6b2e1b816550f 655 SUPERFAMILY SSF53067 4 181 3.4E-61 T 11-10-2018 syc2020_c 023179592528f28fc0c6b2e1b816550f 655 Gene3D G3DSA:3.30.420.40 178 365 2.2E-146 T 11-10-2018 syc2020_c 023179592528f28fc0c6b2e1b816550f 655 Gene3D G3DSA:2.60.34.10 376 560 1.5E-71 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 syc2020_c 023179592528f28fc0c6b2e1b816550f 655 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 190 203 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 syc2020_c 023179592528f28fc0c6b2e1b816550f 655 SUPERFAMILY SSF100920 383 539 7.85E-56 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 syc2020_c 023179592528f28fc0c6b2e1b816550f 655 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 335 349 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 syc2020_c 023179592528f28fc0c6b2e1b816550f 655 SUPERFAMILY SSF53067 185 381 1.71E-59 T 11-10-2018 syc2020_c 023179592528f28fc0c6b2e1b816550f 655 Gene3D G3DSA:3.30.420.40 5 375 2.2E-146 T 11-10-2018 syc2020_c 023179592528f28fc0c6b2e1b816550f 655 Pfam PF00012 Hsp70 protein 4 606 2.5E-231 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 syc2020_c 023179592528f28fc0c6b2e1b816550f 655 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 654 35.117 T 11-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 syc2020_c 023179592528f28fc0c6b2e1b816550f 655 Gene3D G3DSA:3.90.640.10 223 314 2.2E-146 T 11-10-2018 syc1905_c 2fa76bc1b2d33a7e36938161cb73065c 535 SUPERFAMILY SSF55073 364 519 1.41E-39 T 11-10-2018 IPR029787 Nucleotide cyclase syc1905_c 2fa76bc1b2d33a7e36938161cb73065c 535 Pfam PF00990 Diguanylate cyclase, GGDEF domain 359 514 7.4E-41 T 11-10-2018 IPR000160 GGDEF domain syc1905_c 2fa76bc1b2d33a7e36938161cb73065c 535 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 356 516 3.4E-34 T 11-10-2018 IPR000160 GGDEF domain syc1905_c 2fa76bc1b2d33a7e36938161cb73065c 535 SMART SM00267 348 520 1.4E-50 T 11-10-2018 IPR000160 GGDEF domain syc1905_c 2fa76bc1b2d33a7e36938161cb73065c 535 SUPERFAMILY SSF103190 40 164 7.46E-7 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily syc1905_c 2fa76bc1b2d33a7e36938161cb73065c 535 Gene3D G3DSA:3.30.70.270 354 533 6.9E-48 T 11-10-2018 syc1905_c 2fa76bc1b2d33a7e36938161cb73065c 535 Gene3D G3DSA:3.30.450.20 62 167 1.5E-17 T 11-10-2018 syc0469_c 6893a2d35d98de6266b48600cef30b9f 447 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 27 418 1.5E-103 T 11-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 syc0469_c 6893a2d35d98de6266b48600cef30b9f 447 Pfam PF02386 Cation transport protein 18 422 1.6E-54 T 11-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 syc2418_c f1750ecc9eb193bbb116370ecbe1e270 241 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 94 223 3.0E-45 T 11-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 syc2418_c f1750ecc9eb193bbb116370ecbe1e270 241 SUPERFAMILY SSF55166 87 226 1.81E-33 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 syc2418_c f1750ecc9eb193bbb116370ecbe1e270 241 Gene3D G3DSA:3.30.1380.10 67 231 2.0E-40 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 syc2184_d bd70f3a0c58d36541ce119f9ab19d7ba 748 SUPERFAMILY SSF50249 179 643 1.67E-72 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold syc2184_d bd70f3a0c58d36541ce119f9ab19d7ba 748 Gene3D G3DSA:2.40.50.140 650 747 1.2E-18 T 11-10-2018 syc2184_d bd70f3a0c58d36541ce119f9ab19d7ba 748 SMART SM00955 250 573 1.4E-57 T 11-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 syc2184_d bd70f3a0c58d36541ce119f9ab19d7ba 748 Pfam PF00575 S1 RNA binding domain 648 728 1.4E-8 T 11-10-2018 IPR003029 S1 domain GO:0003676 syc2184_d bd70f3a0c58d36541ce119f9ab19d7ba 748 SUPERFAMILY SSF50249 649 728 2.47E-18 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold syc2184_d bd70f3a0c58d36541ce119f9ab19d7ba 748 Pfam PF00773 RNB domain 250 571 2.8E-63 T 11-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 syc2184_d bd70f3a0c58d36541ce119f9ab19d7ba 748 SUPERFAMILY SSF50249 54 134 5.71E-13 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold syc2184_d bd70f3a0c58d36541ce119f9ab19d7ba 748 Pfam PF08206 Ribonuclease B OB domain 73 130 1.6E-18 T 11-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain syc2184_d bd70f3a0c58d36541ce119f9ab19d7ba 748 Gene3D G3DSA:2.40.50.140 57 134 3.0E-11 T 11-10-2018 syc2184_d bd70f3a0c58d36541ce119f9ab19d7ba 748 SMART SM00316 647 730 5.0E-10 T 11-10-2018 IPR022967 RNA-binding domain, S1 syc2184_d bd70f3a0c58d36541ce119f9ab19d7ba 748 SMART SM00357 71 130 8.1E-8 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 syc0325_d 3e13710663da78bf24d15512083226c9 248 Gene3D G3DSA:3.40.1500.20 1 247 1.5E-77 T 11-10-2018 syc0325_d 3e13710663da78bf24d15512083226c9 248 Pfam PF05996 Ferredoxin-dependent bilin reductase 22 244 2.8E-76 T 11-10-2018 IPR009249 Ferredoxin-dependent bilin reductase GO:0010024|GO:0016636|GO:0050897|GO:0055114 syc0325_d 3e13710663da78bf24d15512083226c9 248 Hamap MF_00618 Phycocyanobilin:ferredoxin oxidoreductase [pcyA]. 10 245 49.42 T 11-10-2018 IPR022870 Phycocyanobilin:ferredoxin oxidoreductase GO:0010024|GO:0050620|GO:0055114 KEGG: 00860+1.3.7.5|MetaCyc: PWY-5917|MetaCyc: PWY-7578 syc1071_d c63387f660ece36f5b9958f38ffd1c11 228 SUPERFAMILY SSF48150 9 215 6.12E-68 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 syc1071_d c63387f660ece36f5b9958f38ffd1c11 228 TIGRFAM TIGR01083 nth: endonuclease III 9 201 2.5E-77 T 11-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 syc1071_d c63387f660ece36f5b9958f38ffd1c11 228 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 194 210 - T 11-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 syc1071_d c63387f660ece36f5b9958f38ffd1c11 228 ProSitePatterns PS01155 Endonuclease III family signature. 108 137 - T 11-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 syc1071_d c63387f660ece36f5b9958f38ffd1c11 228 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 194 210 6.5E-5 T 11-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 syc1071_d c63387f660ece36f5b9958f38ffd1c11 228 SMART SM00478 44 192 3.7E-63 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 syc1071_d c63387f660ece36f5b9958f38ffd1c11 228 Hamap MF_00942 Endonuclease III [nth]. 6 216 37.979 T 11-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 syc1071_d c63387f660ece36f5b9958f38ffd1c11 228 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 40 175 3.1E-26 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 syc1071_d c63387f660ece36f5b9958f38ffd1c11 228 PIRSF PIRSF001435 5 219 1.6E-48 T 11-10-2018 syc1071_d c63387f660ece36f5b9958f38ffd1c11 228 Gene3D G3DSA:1.10.1670.10 17 210 2.4E-75 T 11-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 syc1071_d c63387f660ece36f5b9958f38ffd1c11 228 SMART SM00525 193 213 0.0028 T 11-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 syc1071_d c63387f660ece36f5b9958f38ffd1c11 228 Gene3D G3DSA:1.10.340.30 27 138 2.4E-75 T 11-10-2018 syc2167_c 10c48752ca5ddcde65a27f1149be4d77 280 SUPERFAMILY SSF54506 145 277 6.67E-51 T 11-10-2018 syc2167_c 10c48752ca5ddcde65a27f1149be4d77 280 Gene3D G3DSA:3.10.310.10 5 274 1.7E-110 T 11-10-2018 syc2167_c 10c48752ca5ddcde65a27f1149be4d77 280 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 276 9.4E-96 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 syc2167_c 10c48752ca5ddcde65a27f1149be4d77 280 Pfam PF01678 Diaminopimelate epimerase 5 125 1.3E-32 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 syc2167_c 10c48752ca5ddcde65a27f1149be4d77 280 Pfam PF01678 Diaminopimelate epimerase 157 271 1.0E-31 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 syc2167_c 10c48752ca5ddcde65a27f1149be4d77 280 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 278 38.791 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 syc2167_c 10c48752ca5ddcde65a27f1149be4d77 280 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 11-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 syc2167_c 10c48752ca5ddcde65a27f1149be4d77 280 Gene3D G3DSA:3.10.310.10 121 271 1.7E-110 T 11-10-2018 syc2167_c 10c48752ca5ddcde65a27f1149be4d77 280 SUPERFAMILY SSF54506 3 131 1.94E-42 T 11-10-2018 syc1947_d b176876bdb72ef670d0795108374c20b 162 ProSitePatterns PS01284 Thermonuclease family signature 2. 89 99 - T 11-10-2018 IPR002071 Thermonuclease active site GO:0003676|GO:0004518 Reactome: R-HSA-6802952 syc1947_d b176876bdb72ef670d0795108374c20b 162 Pfam PF00565 Staphylococcal nuclease homologue 47 146 2.4E-19 T 11-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 syc1947_d b176876bdb72ef670d0795108374c20b 162 Gene3D G3DSA:2.40.50.90 16 148 5.0E-31 T 11-10-2018 IPR035437 SNase-like, OB-fold superfamily syc1947_d b176876bdb72ef670d0795108374c20b 162 ProSitePatterns PS01123 Thermonuclease family signature 1. 33 57 - T 11-10-2018 IPR002071 Thermonuclease active site GO:0003676|GO:0004518 Reactome: R-HSA-6802952 syc1947_d b176876bdb72ef670d0795108374c20b 162 SMART SM00318 22 147 2.4E-26 T 11-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 syc1947_d b176876bdb72ef670d0795108374c20b 162 SUPERFAMILY SSF50199 25 149 1.14E-34 T 11-10-2018 syc0714_d 89e64c09928baf268e67a8cd2494ef92 245 Pfam PF00877 NlpC/P60 family 115 221 1.1E-23 T 11-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain syc0714_d 89e64c09928baf268e67a8cd2494ef92 245 SUPERFAMILY SSF82057 18 87 5.4E-22 T 11-10-2018 syc0714_d 89e64c09928baf268e67a8cd2494ef92 245 Gene3D G3DSA:3.90.1720.10 90 237 1.4E-41 T 11-10-2018 syc0714_d 89e64c09928baf268e67a8cd2494ef92 245 Gene3D G3DSA:2.30.30.40 18 88 1.7E-24 T 11-10-2018 syc0714_d 89e64c09928baf268e67a8cd2494ef92 245 SUPERFAMILY SSF54001 96 232 3.58E-33 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily syc0720_c 7171b458ba5cef3324205bd4e12b6d4d 221 Gene3D G3DSA:3.40.50.880 1 219 6.3E-66 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like syc0720_c 7171b458ba5cef3324205bd4e12b6d4d 221 SUPERFAMILY SSF52317 2 217 8.6E-74 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like syc0720_c 7171b458ba5cef3324205bd4e12b6d4d 221 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 2 204 4.1E-42 T 11-10-2018 syc0720_c 7171b458ba5cef3324205bd4e12b6d4d 221 Hamap MF_00421 Phosphoribosylformylglycinamidine synthase subunit PurQ [purQ]. 1 217 42.981 T 11-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 syc0720_c 7171b458ba5cef3324205bd4e12b6d4d 221 TIGRFAM TIGR01737 FGAM_synth_I: phosphoribosylformylglycinamidine synthase I 1 217 5.9E-87 T 11-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 syc0720_c 7171b458ba5cef3324205bd4e12b6d4d 221 SMART SM01211 1 219 1.9E-126 T 11-10-2018 syc0720_c 7171b458ba5cef3324205bd4e12b6d4d 221 PIRSF PIRSF001586 1 221 6.2E-82 T 11-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 syc2229_c d0f2f8986b39cd260488f254fd2b9a95 306 Gene3D G3DSA:3.40.50.10330 23 293 7.8E-72 T 11-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 syc2229_c d0f2f8986b39cd260488f254fd2b9a95 306 Pfam PF01513 ATP-NAD kinase 45 274 9.7E-61 T 11-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 syc2229_c d0f2f8986b39cd260488f254fd2b9a95 306 Hamap MF_00361 NAD kinase [nadK]. 4 293 30.82 T 11-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 syc2229_c d0f2f8986b39cd260488f254fd2b9a95 306 Gene3D G3DSA:2.60.200.30 125 269 7.8E-72 T 11-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 syc2229_c d0f2f8986b39cd260488f254fd2b9a95 306 SUPERFAMILY SSF111331 5 294 2.75E-75 T 11-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily syc0845_c 0d9ee5c86ccb9fe76ea67c5f69dcdedc 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 1.5E-16 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR syc0845_c 0d9ee5c86ccb9fe76ea67c5f69dcdedc 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 1.5E-16 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR syc0845_c 0d9ee5c86ccb9fe76ea67c5f69dcdedc 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 1.5E-16 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR syc0845_c 0d9ee5c86ccb9fe76ea67c5f69dcdedc 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 syc0845_c 0d9ee5c86ccb9fe76ea67c5f69dcdedc 249 Gene3D G3DSA:3.40.50.720 4 249 8.1E-90 T 11-10-2018 syc0845_c 0d9ee5c86ccb9fe76ea67c5f69dcdedc 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 4.0E-52 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR syc0845_c 0d9ee5c86ccb9fe76ea67c5f69dcdedc 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 4.0E-52 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR syc0845_c 0d9ee5c86ccb9fe76ea67c5f69dcdedc 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 4.0E-52 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR syc0845_c 0d9ee5c86ccb9fe76ea67c5f69dcdedc 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 4.0E-52 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR syc0845_c 0d9ee5c86ccb9fe76ea67c5f69dcdedc 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 4.0E-52 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR syc0845_c 0d9ee5c86ccb9fe76ea67c5f69dcdedc 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 4.0E-52 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR syc0845_c 0d9ee5c86ccb9fe76ea67c5f69dcdedc 249 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 9 189 2.4E-5 T 11-10-2018 syc0845_c 0d9ee5c86ccb9fe76ea67c5f69dcdedc 249 SUPERFAMILY SSF51735 8 248 2.38E-88 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily syc0845_c 0d9ee5c86ccb9fe76ea67c5f69dcdedc 249 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 11 247 6.6E-99 T 11-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 syc0845_c 0d9ee5c86ccb9fe76ea67c5f69dcdedc 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 246 6.1E-70 T 11-10-2018 syc0570_d 11b1aa6899d733a05b5c9136047bd31c 459 Gene3D G3DSA:3.40.50.720 1 217 3.6E-73 T 11-10-2018 syc0570_d 11b1aa6899d733a05b5c9136047bd31c 459 PIRSF PIRSF500134 1 459 3.3E-174 T 11-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 syc0570_d 11b1aa6899d733a05b5c9136047bd31c 459 Gene3D G3DSA:1.20.5.100 230 261 8.8E-20 T 11-10-2018 syc0570_d 11b1aa6899d733a05b5c9136047bd31c 459 SUPERFAMILY SSF52413 333 454 3.53E-34 T 11-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 syc0570_d 11b1aa6899d733a05b5c9136047bd31c 459 SUPERFAMILY SSF48179 232 325 7.48E-34 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 syc0570_d 11b1aa6899d733a05b5c9136047bd31c 459 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 347 444 3.1E-27 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 syc0570_d 11b1aa6899d733a05b5c9136047bd31c 459 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 440 3.3E-129 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 syc0570_d 11b1aa6899d733a05b5c9136047bd31c 459 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 232 323 1.0E-39 T 11-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 syc0570_d 11b1aa6899d733a05b5c9136047bd31c 459 PIRSF PIRSF000124 1 459 1.6E-136 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 syc0570_d 11b1aa6899d733a05b5c9136047bd31c 459 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 205 1.1E-62 T 11-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 syc0570_d 11b1aa6899d733a05b5c9136047bd31c 459 SUPERFAMILY SSF51735 1 213 8.41E-51 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily syc0570_d 11b1aa6899d733a05b5c9136047bd31c 459 Gene3D G3DSA:3.40.50.720 262 459 2.6E-70 T 11-10-2018 syc0570_d 11b1aa6899d733a05b5c9136047bd31c 459 SMART SM00984 346 444 3.4E-40 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 syc0128_c d20f66ef0cba03f583f807e5dc7dd049 395 Pfam PF02222 ATP-grasp domain 117 285 7.0E-62 T 11-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type syc0128_c d20f66ef0cba03f583f807e5dc7dd049 395 Gene3D G3DSA:3.40.50.20 5 112 3.4E-30 T 11-10-2018 syc0128_c d20f66ef0cba03f583f807e5dc7dd049 395 SUPERFAMILY SSF52440 9 104 3.45E-25 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily syc0128_c d20f66ef0cba03f583f807e5dc7dd049 395 Gene3D G3DSA:3.30.470.20 187 386 8.4E-68 T 11-10-2018 syc0128_c d20f66ef0cba03f583f807e5dc7dd049 395 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 11 370 6.0E-149 T 11-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 syc0128_c d20f66ef0cba03f583f807e5dc7dd049 395 Gene3D G3DSA:3.30.1490.20 113 186 8.2E-19 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 syc0128_c d20f66ef0cba03f583f807e5dc7dd049 395 SUPERFAMILY SSF56059 108 305 6.72E-59 T 11-10-2018 syc0128_c d20f66ef0cba03f583f807e5dc7dd049 395 SUPERFAMILY SSF51246 310 382 4.87E-14 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 syc0128_c d20f66ef0cba03f583f807e5dc7dd049 395 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 11 366 40.297 T 11-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 syc1521_c f9d71dc69d2587ced4748998aac2d0d3 261 Pfam PF04029 2-phosphosulpholactate phosphatase 17 239 2.7E-82 T 11-10-2018 IPR005238 ComB-like GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 syc1521_c f9d71dc69d2587ced4748998aac2d0d3 261 SUPERFAMILY SSF142823 12 244 2.09E-75 T 11-10-2018 IPR036702 ComB-like superfamily GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 syc1521_c f9d71dc69d2587ced4748998aac2d0d3 261 Gene3D G3DSA:3.90.1560.10 18 246 6.7E-68 T 11-10-2018 IPR036702 ComB-like superfamily GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 syc1521_c f9d71dc69d2587ced4748998aac2d0d3 261 Hamap MF_00490 2-phosphosulfolactate phosphatase [comB]. 15 248 30.948 T 11-10-2018 IPR005238 ComB-like GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 syc0112_d 81581f628ac97950cd6a99c12bbb245f 371 Pfam PF07705 CARDB 270 350 6.2E-5 T 11-10-2018 IPR011635 CARDB domain syc0112_d 81581f628ac97950cd6a99c12bbb245f 371 Gene3D G3DSA:2.60.40.10 248 359 1.5E-5 T 11-10-2018 IPR013783 Immunoglobulin-like fold syc0239_d 20f5d3e44be5d6f2c47846966f0c2f97 627 Pfam PF01434 Peptidase family M41 405 615 4.2E-79 T 11-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 syc0239_d 20f5d3e44be5d6f2c47846966f0c2f97 627 SMART SM00382 205 346 3.3E-25 T 11-10-2018 IPR003593 AAA+ ATPase domain syc0239_d 20f5d3e44be5d6f2c47846966f0c2f97 627 SUPERFAMILY SSF52540 170 438 8.7E-70 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0239_d 20f5d3e44be5d6f2c47846966f0c2f97 627 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 209 343 9.3E-46 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 syc0239_d 20f5d3e44be5d6f2c47846966f0c2f97 627 SUPERFAMILY SSF140990 425 622 9.42E-67 T 11-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 syc0239_d 20f5d3e44be5d6f2c47846966f0c2f97 627 Gene3D G3DSA:1.20.58.760 425 624 1.8E-70 T 11-10-2018 syc0239_d 20f5d3e44be5d6f2c47846966f0c2f97 627 Pfam PF06480 FtsH Extracellular 20 112 8.5E-7 T 11-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 syc0239_d 20f5d3e44be5d6f2c47846966f0c2f97 627 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 2 623 36.194 T 11-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 syc0239_d 20f5d3e44be5d6f2c47846966f0c2f97 627 ProSitePatterns PS00674 AAA-protein family signature. 314 332 - T 11-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 syc0239_d 20f5d3e44be5d6f2c47846966f0c2f97 627 Gene3D G3DSA:1.10.8.60 345 422 2.2E-27 T 11-10-2018 syc0239_d 20f5d3e44be5d6f2c47846966f0c2f97 627 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 121 616 2.9E-216 T 11-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 syc0239_d 20f5d3e44be5d6f2c47846966f0c2f97 627 Gene3D G3DSA:3.40.50.300 164 343 1.5E-67 T 11-10-2018 syc1813_d 8a242840711a2eda2d1c0fd7e14517b7 324 Gene3D G3DSA:3.90.550.10 59 242 1.4E-11 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases syc1813_d 8a242840711a2eda2d1c0fd7e14517b7 324 SUPERFAMILY SSF53448 21 241 1.5E-17 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases syc2427_c aecef7d4473df831f39b0ac9444c3e25 187 Pfam PF14218 Circadian oscillating protein COP23 66 171 9.0E-7 T 11-10-2018 IPR025478 Circadian oscillating protein COP23 syc1347_d 1957aa8dfccba7991b67d9161986f3a9 144 SMART SM00232 3 140 2.5E-8 T 11-10-2018 IPR000555 JAB1/MPN/MOV34 metalloenzyme domain GO:0005515 syc1347_d 1957aa8dfccba7991b67d9161986f3a9 144 Gene3D G3DSA:3.40.140.10 6 143 1.1E-42 T 11-10-2018 syc1347_d 1957aa8dfccba7991b67d9161986f3a9 144 Pfam PF14464 Prokaryotic homologs of the JAB domain 10 128 1.1E-25 T 11-10-2018 IPR028090 JAB domain, prokaryotic syc1347_d 1957aa8dfccba7991b67d9161986f3a9 144 SUPERFAMILY SSF102712 2 136 2.62E-33 T 11-10-2018 syc2393_d bc1e194ff5668b6cb2b7992613455a94 93 Gene3D G3DSA:3.40.5.90 7 44 3.0E-9 T 11-10-2018 syc2393_d bc1e194ff5668b6cb2b7992613455a94 93 Gene3D G3DSA:3.40.5.90 45 86 2.0E-11 T 11-10-2018 syc2393_d bc1e194ff5668b6cb2b7992613455a94 93 SMART SM00704 43 80 6.7E-8 T 11-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 syc2393_d bc1e194ff5668b6cb2b7992613455a94 93 SMART SM00704 8 39 0.027 T 11-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 syc2393_d bc1e194ff5668b6cb2b7992613455a94 93 Pfam PF09360 Iron-binding zinc finger CDGSH type 54 74 9.6E-10 T 11-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 syc2393_d bc1e194ff5668b6cb2b7992613455a94 93 Pfam PF09360 Iron-binding zinc finger CDGSH type 20 38 7.5E-7 T 11-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 syc2356_c d9e641b956aecbeacc56d8280b025468 479 SUPERFAMILY SSF101960 33 476 7.85E-142 T 11-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily syc2356_c d9e641b956aecbeacc56d8280b025468 479 Pfam PF01458 Uncharacterized protein family (UPF0051) 217 450 4.7E-68 T 11-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 syc2356_c d9e641b956aecbeacc56d8280b025468 479 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 12 470 6.6E-203 T 11-10-2018 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 syc1768_d b6d8f4eff496fe206d20a48c7d6f48be 511 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 26 207 7.6E-59 T 11-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 syc1768_d b6d8f4eff496fe206d20a48c7d6f48be 511 Gene3D G3DSA:3.40.50.720 20 195 1.1E-53 T 11-10-2018 syc1768_d b6d8f4eff496fe206d20a48c7d6f48be 511 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 22 510 2.3E-204 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 syc1768_d b6d8f4eff496fe206d20a48c7d6f48be 511 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 239 256 2.9E-50 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 syc1768_d b6d8f4eff496fe206d20a48c7d6f48be 511 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 348 374 2.9E-50 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 syc1768_d b6d8f4eff496fe206d20a48c7d6f48be 511 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 257 273 2.9E-50 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 syc1768_d b6d8f4eff496fe206d20a48c7d6f48be 511 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 187 215 2.9E-50 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 syc1768_d b6d8f4eff496fe206d20a48c7d6f48be 511 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 163 176 2.9E-50 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 syc1768_d b6d8f4eff496fe206d20a48c7d6f48be 511 PIRSF PIRSF000110 12 511 5.2E-184 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 syc1768_d b6d8f4eff496fe206d20a48c7d6f48be 511 Gene3D G3DSA:3.30.360.10 196 510 2.7E-130 T 11-10-2018 syc1768_d b6d8f4eff496fe206d20a48c7d6f48be 511 SUPERFAMILY SSF51735 11 210 5.12E-59 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily syc1768_d b6d8f4eff496fe206d20a48c7d6f48be 511 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 22 510 93.603 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 syc1768_d b6d8f4eff496fe206d20a48c7d6f48be 511 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 197 203 - T 11-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 syc1768_d b6d8f4eff496fe206d20a48c7d6f48be 511 SUPERFAMILY SSF55347 197 509 5.56E-118 T 11-10-2018 syc1768_d b6d8f4eff496fe206d20a48c7d6f48be 511 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 209 509 1.5E-121 T 11-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 syc0510_c 9847224715672d2dad1f4bca7b933423 651 Gene3D G3DSA:3.20.20.10 86 367 7.3E-233 T 11-10-2018 IPR029066 PLP-binding barrel syc0510_c 9847224715672d2dad1f4bca7b933423 651 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 293 309 - T 11-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site syc0510_c 9847224715672d2dad1f4bca7b933423 651 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 110 361 1.9E-41 T 11-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 syc0510_c 9847224715672d2dad1f4bca7b933423 651 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 352 371 6.8E-20 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 syc0510_c 9847224715672d2dad1f4bca7b933423 651 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 117 135 6.8E-20 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 syc0510_c 9847224715672d2dad1f4bca7b933423 651 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 141 153 6.8E-20 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 syc0510_c 9847224715672d2dad1f4bca7b933423 651 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 258 271 6.8E-20 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 syc0510_c 9847224715672d2dad1f4bca7b933423 651 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 556 569 6.8E-20 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 syc0510_c 9847224715672d2dad1f4bca7b933423 651 TIGRFAM TIGR01273 speA: arginine decarboxylase 24 649 1.1E-233 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 syc0510_c 9847224715672d2dad1f4bca7b933423 651 Gene3D G3DSA:2.40.37.10 33 582 7.3E-233 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 syc0510_c 9847224715672d2dad1f4bca7b933423 651 SUPERFAMILY SSF51419 85 364 4.11E-67 T 11-10-2018 IPR029066 PLP-binding barrel syc0510_c 9847224715672d2dad1f4bca7b933423 651 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 22 650 46.562 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 syc0510_c 9847224715672d2dad1f4bca7b933423 651 PRINTS PR01180 Arginine decarboxylase signature 165 180 4.4E-77 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 syc0510_c 9847224715672d2dad1f4bca7b933423 651 PRINTS PR01180 Arginine decarboxylase signature 556 577 4.4E-77 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 syc0510_c 9847224715672d2dad1f4bca7b933423 651 PRINTS PR01180 Arginine decarboxylase signature 85 100 4.4E-77 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 syc0510_c 9847224715672d2dad1f4bca7b933423 651 PRINTS PR01180 Arginine decarboxylase signature 215 237 4.4E-77 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 syc0510_c 9847224715672d2dad1f4bca7b933423 651 PRINTS PR01180 Arginine decarboxylase signature 191 212 4.4E-77 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 syc0510_c 9847224715672d2dad1f4bca7b933423 651 PRINTS PR01180 Arginine decarboxylase signature 503 528 4.4E-77 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 syc0510_c 9847224715672d2dad1f4bca7b933423 651 PRINTS PR01180 Arginine decarboxylase signature 109 123 4.4E-77 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 syc0510_c 9847224715672d2dad1f4bca7b933423 651 PRINTS PR01180 Arginine decarboxylase signature 478 499 4.4E-77 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 syc0510_c 9847224715672d2dad1f4bca7b933423 651 PRINTS PR01180 Arginine decarboxylase signature 342 359 4.4E-77 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 syc0510_c 9847224715672d2dad1f4bca7b933423 651 Gene3D G3DSA:1.20.58.930 384 474 7.3E-233 T 11-10-2018 syc0510_c 9847224715672d2dad1f4bca7b933423 651 PIRSF PIRSF001336 5 651 2.7E-289 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 syc0510_c 9847224715672d2dad1f4bca7b933423 651 SUPERFAMILY SSF50621 473 577 4.08E-6 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 syc0510_c 9847224715672d2dad1f4bca7b933423 651 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 117 135 - T 11-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site syc0996_d c4d53a536b3194342c49cea23c6ba671 368 PIRSF PIRSF001455 23 367 5.3E-106 T 11-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 syc0996_d c4d53a536b3194342c49cea23c6ba671 368 Pfam PF01761 3-dehydroquinate synthase 71 331 3.5E-106 T 11-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 syc0996_d c4d53a536b3194342c49cea23c6ba671 368 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 14 361 3.2E-120 T 11-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 syc0996_d c4d53a536b3194342c49cea23c6ba671 368 SUPERFAMILY SSF56796 5 363 1.07E-111 T 11-10-2018 syc0996_d c4d53a536b3194342c49cea23c6ba671 368 Gene3D G3DSA:3.40.50.1970 1 176 8.0E-62 T 11-10-2018 syc0996_d c4d53a536b3194342c49cea23c6ba671 368 Gene3D G3DSA:1.20.1090.10 177 367 5.8E-64 T 11-10-2018 syc0996_d c4d53a536b3194342c49cea23c6ba671 368 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 2 362 68.62 T 11-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 syc1766_d 77285ec8449ad02dee6c87480455c7fd 319 SUPERFAMILY SSF55846 119 299 2.88E-38 T 11-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 syc1766_d 77285ec8449ad02dee6c87480455c7fd 319 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 138 281 1.1E-17 T 11-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 syc1766_d 77285ec8449ad02dee6c87480455c7fd 319 SMART SM00644 128 282 6.5E-14 T 11-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 syc1766_d 77285ec8449ad02dee6c87480455c7fd 319 Gene3D G3DSA:3.40.80.10 138 293 3.8E-30 T 11-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 syc0944_c 0309ff957f568dcad393243185dfec25 377 Pfam PF00534 Glycosyl transferases group 1 197 346 2.3E-35 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 syc0944_c 0309ff957f568dcad393243185dfec25 377 SUPERFAMILY SSF53756 1 368 3.14E-94 T 11-10-2018 syc0944_c 0309ff957f568dcad393243185dfec25 377 Gene3D G3DSA:3.40.50.2000 201 356 3.1E-42 T 11-10-2018 syc0944_c 0309ff957f568dcad393243185dfec25 377 Gene3D G3DSA:3.40.50.2000 1 195 5.6E-33 T 11-10-2018 syc0944_c 0309ff957f568dcad393243185dfec25 377 Pfam PF13439 Glycosyltransferase Family 4 15 177 1.5E-27 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 syc1181_c e6d958cd422eee614dd4fdbd52fff2c2 81 PRINTS PR00124 ATP synthase C subunit signature 12 31 1.7E-24 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 syc1181_c e6d958cd422eee614dd4fdbd52fff2c2 81 PRINTS PR00124 ATP synthase C subunit signature 50 75 1.7E-24 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 syc1181_c e6d958cd422eee614dd4fdbd52fff2c2 81 PRINTS PR00124 ATP synthase C subunit signature 33 48 1.7E-24 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 syc1181_c e6d958cd422eee614dd4fdbd52fff2c2 81 Gene3D G3DSA:1.20.20.10 2 78 1.1E-34 T 11-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 syc1181_c e6d958cd422eee614dd4fdbd52fff2c2 81 Pfam PF00137 ATP synthase subunit C 11 74 2.4E-19 T 11-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 syc1181_c e6d958cd422eee614dd4fdbd52fff2c2 81 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 20 77 3.6E-20 T 11-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 syc1181_c e6d958cd422eee614dd4fdbd52fff2c2 81 SUPERFAMILY SSF81333 3 79 5.89E-23 T 11-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily syc1181_c e6d958cd422eee614dd4fdbd52fff2c2 81 ProSitePatterns PS00605 ATP synthase c subunit signature. 40 61 - T 11-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 syc1181_c e6d958cd422eee614dd4fdbd52fff2c2 81 Hamap MF_01396 ATP synthase subunit c [atpH]. 10 75 16.151 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 syc1900_c 53aaa41b8ae3ec2632fffbc0010366ae 370 Pfam PF00696 Amino acid kinase family 7 236 1.4E-43 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 syc1900_c 53aaa41b8ae3ec2632fffbc0010366ae 370 Gene3D G3DSA:2.30.130.10 268 370 5.9E-38 T 11-10-2018 IPR036974 PUA domain superfamily GO:0003723 syc1900_c 53aaa41b8ae3ec2632fffbc0010366ae 370 PIRSF PIRSF000729 1 370 8.4E-147 T 11-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 syc1900_c 53aaa41b8ae3ec2632fffbc0010366ae 370 ProSitePatterns PS00902 Glutamate 5-kinase signature. 209 226 - T 11-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 syc1900_c 53aaa41b8ae3ec2632fffbc0010366ae 370 Pfam PF01472 PUA domain 279 353 3.2E-20 T 11-10-2018 IPR002478 PUA domain GO:0003723 syc1900_c 53aaa41b8ae3ec2632fffbc0010366ae 370 PRINTS PR00474 Glutamate 5-kinase family signature 150 177 1.4E-53 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 syc1900_c 53aaa41b8ae3ec2632fffbc0010366ae 370 PRINTS PR00474 Glutamate 5-kinase family signature 44 58 1.4E-53 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 syc1900_c 53aaa41b8ae3ec2632fffbc0010366ae 370 PRINTS PR00474 Glutamate 5-kinase family signature 211 231 1.4E-53 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 syc1900_c 53aaa41b8ae3ec2632fffbc0010366ae 370 PRINTS PR00474 Glutamate 5-kinase family signature 78 106 1.4E-53 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 syc1900_c 53aaa41b8ae3ec2632fffbc0010366ae 370 PRINTS PR00474 Glutamate 5-kinase family signature 118 139 1.4E-53 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 syc1900_c 53aaa41b8ae3ec2632fffbc0010366ae 370 TIGRFAM TIGR01027 proB: glutamate 5-kinase 7 368 6.7E-145 T 11-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 syc1900_c 53aaa41b8ae3ec2632fffbc0010366ae 370 SMART SM00359 279 362 3.3E-17 T 11-10-2018 IPR002478 PUA domain GO:0003723 syc1900_c 53aaa41b8ae3ec2632fffbc0010366ae 370 SUPERFAMILY SSF88697 279 369 2.27E-23 T 11-10-2018 IPR015947 PUA-like superfamily syc1900_c 53aaa41b8ae3ec2632fffbc0010366ae 370 Gene3D G3DSA:3.40.1160.10 3 267 1.0E-92 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily syc1900_c 53aaa41b8ae3ec2632fffbc0010366ae 370 SUPERFAMILY SSF53633 7 259 1.44E-72 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily syc1900_c 53aaa41b8ae3ec2632fffbc0010366ae 370 Hamap MF_00456 Glutamate 5-kinase [proB]. 6 261 36.69 T 11-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 syc1270_d 08887e32931ad3058acec66bc2d23e32 47 SUPERFAMILY SSF103511 3 46 7.98E-14 T 11-10-2018 syc1270_d 08887e32931ad3058acec66bc2d23e32 47 Pfam PF00504 Chlorophyll A-B binding protein 6 32 7.7E-5 T 11-10-2018 IPR022796 Chlorophyll A-B binding protein syc1270_d 08887e32931ad3058acec66bc2d23e32 47 Gene3D G3DSA:1.10.3460.10 1 46 9.2E-6 T 11-10-2018 IPR023329 Chlorophyll a/b binding domain superfamily syc0108_d 1231d5bc42bd83a3a957cf0b0d1dfd6e 355 Gene3D G3DSA:3.40.1390.10 6 107 6.6E-11 T 11-10-2018 syc0108_d 1231d5bc42bd83a3a957cf0b0d1dfd6e 355 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 23 334 4.6E-94 T 11-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 syc0108_d 1231d5bc42bd83a3a957cf0b0d1dfd6e 355 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 6 334 35.098 T 11-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 syc0108_d 1231d5bc42bd83a3a957cf0b0d1dfd6e 355 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 136 170 1.8E-9 T 11-10-2018 IPR001451 Hexapeptide repeat syc0108_d 1231d5bc42bd83a3a957cf0b0d1dfd6e 355 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 232 265 2.8E-4 T 11-10-2018 IPR001451 Hexapeptide repeat syc0108_d 1231d5bc42bd83a3a957cf0b0d1dfd6e 355 Gene3D G3DSA:2.160.10.10 109 316 4.1E-56 T 11-10-2018 syc0108_d 1231d5bc42bd83a3a957cf0b0d1dfd6e 355 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 109 135 0.23 T 11-10-2018 IPR001451 Hexapeptide repeat syc0108_d 1231d5bc42bd83a3a957cf0b0d1dfd6e 355 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 175 188 0.11 T 11-10-2018 IPR001451 Hexapeptide repeat syc0108_d 1231d5bc42bd83a3a957cf0b0d1dfd6e 355 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 25 97 9.3E-15 T 11-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 syc0108_d 1231d5bc42bd83a3a957cf0b0d1dfd6e 355 SUPERFAMILY SSF51161 38 323 3.89E-73 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily syc0687_c 2f48a37317ea607cd48e2d7e96597bca 411 TIGRFAM TIGR03542 DAPAT_plant: LL-diaminopimelate aminotransferase 3 407 3.8E-185 T 11-10-2018 IPR019942 LL-diaminopimelate aminotransferase/aminotransferase ALD1 GO:0008483 KEGG: 00300+2.6.1.83|MetaCyc: PWY-5097 syc0687_c 2f48a37317ea607cd48e2d7e96597bca 411 SUPERFAMILY SSF53383 3 408 6.86E-79 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase syc0687_c 2f48a37317ea607cd48e2d7e96597bca 411 Pfam PF00155 Aminotransferase class I and II 36 405 4.2E-30 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 syc0687_c 2f48a37317ea607cd48e2d7e96597bca 411 Gene3D G3DSA:3.90.1150.10 19 405 3.7E-129 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 syc0687_c 2f48a37317ea607cd48e2d7e96597bca 411 Hamap MF_01642 LL-diaminopimelate aminotransferase [dapL]. 3 408 55.158 T 11-10-2018 IPR019942 LL-diaminopimelate aminotransferase/aminotransferase ALD1 GO:0008483 KEGG: 00300+2.6.1.83|MetaCyc: PWY-5097 syc0687_c 2f48a37317ea607cd48e2d7e96597bca 411 Gene3D G3DSA:3.40.640.10 46 306 3.7E-129 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 syc1478_c f2cce1fc369926019f496f04db8f6f81 633 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 172 349 3.2E-52 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 syc1478_c f2cce1fc369926019f496f04db8f6f81 633 SUPERFAMILY SSF55124 16 146 3.27E-29 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 syc1478_c f2cce1fc369926019f496f04db8f6f81 633 Gene3D G3DSA:3.90.480.10 79 145 2.7E-21 T 11-10-2018 syc1478_c f2cce1fc369926019f496f04db8f6f81 633 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 498 514 - T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 syc1478_c f2cce1fc369926019f496f04db8f6f81 633 SUPERFAMILY SSF56014 449 590 1.96E-34 T 11-10-2018 syc1478_c f2cce1fc369926019f496f04db8f6f81 633 Gene3D G3DSA:3.30.413.10 447 583 5.3E-33 T 11-10-2018 syc1478_c f2cce1fc369926019f496f04db8f6f81 633 Gene3D G3DSA:3.30.413.10 209 357 2.5E-45 T 11-10-2018 syc1478_c f2cce1fc369926019f496f04db8f6f81 633 SUPERFAMILY SSF56014 147 364 2.62E-54 T 11-10-2018 syc1478_c f2cce1fc369926019f496f04db8f6f81 633 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 73 136 3.7E-16 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 syc1478_c f2cce1fc369926019f496f04db8f6f81 633 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 368 435 1.1E-8 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 syc1478_c f2cce1fc369926019f496f04db8f6f81 633 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 450 587 2.9E-5 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 syc1478_c f2cce1fc369926019f496f04db8f6f81 633 Gene3D G3DSA:3.30.413.10 146 179 2.7E-21 T 11-10-2018 syc1478_c f2cce1fc369926019f496f04db8f6f81 633 TIGRFAM TIGR02042 sir: sulfite reductase, ferredoxin dependent 11 588 0.0 T 11-10-2018 IPR011787 Sulphite reductase, ferredoxin dependent GO:0020037|GO:0050311|GO:0051539 KEGG: 00920+1.8.7.1 syc1478_c f2cce1fc369926019f496f04db8f6f81 633 PRINTS PR00397 Sirohaem Fe-binding site signature 450 468 1.2E-8 T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 syc1478_c f2cce1fc369926019f496f04db8f6f81 633 PRINTS PR00397 Sirohaem Fe-binding site signature 498 516 1.2E-8 T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 syc1478_c f2cce1fc369926019f496f04db8f6f81 633 SUPERFAMILY SSF55124 365 443 5.98E-17 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 syc1429_c e64b8b203b4bc1334a3c0f465524c039 437 Pfam PF05195 Aminopeptidase P, N-terminal domain 8 123 4.2E-38 T 11-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 syc1429_c e64b8b203b4bc1334a3c0f465524c039 437 SUPERFAMILY SSF53092 4 173 4.34E-51 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal syc1429_c e64b8b203b4bc1334a3c0f465524c039 437 Gene3D G3DSA:3.40.350.10 4 170 2.3E-50 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal syc1429_c e64b8b203b4bc1334a3c0f465524c039 437 SMART SM01011 3 135 3.1E-63 T 11-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 syc1429_c e64b8b203b4bc1334a3c0f465524c039 437 SUPERFAMILY SSF55920 174 435 1.44E-81 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like syc1429_c e64b8b203b4bc1334a3c0f465524c039 437 Pfam PF00557 Metallopeptidase family M24 179 417 1.2E-62 T 11-10-2018 IPR000994 Peptidase M24 syc1429_c e64b8b203b4bc1334a3c0f465524c039 437 Gene3D G3DSA:3.90.230.10 172 437 7.3E-95 T 11-10-2018 syc1429_c e64b8b203b4bc1334a3c0f465524c039 437 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 347 359 - T 11-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site syc0547_d cd4d4153abceecf2da947288281855dd 58 Pfam PF01783 Ribosomal L32p protein family 2 42 7.5E-11 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc0547_d cd4d4153abceecf2da947288281855dd 58 SUPERFAMILY SSF57829 1 24 1.4E-6 T 11-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 syc0547_d cd4d4153abceecf2da947288281855dd 58 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 25 1.3E-5 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc0547_d cd4d4153abceecf2da947288281855dd 58 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 53 15.971 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc0147_c abc215e4f29c5a2e40daf0593c245797 211 Gene3D G3DSA:3.40.50.150 2 197 5.0E-47 T 11-10-2018 syc0147_c abc215e4f29c5a2e40daf0593c245797 211 Pfam PF13489 Methyltransferase domain 31 187 4.5E-28 T 11-10-2018 syc0147_c abc215e4f29c5a2e40daf0593c245797 211 SUPERFAMILY SSF53335 12 199 3.72E-46 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase syc1794_c c44775d7068993030052caa230f4fe9d 372 Gene3D G3DSA:3.30.70.1400 58 147 1.3E-74 T 11-10-2018 syc1794_c c44775d7068993030052caa230f4fe9d 372 Gene3D G3DSA:2.40.30.110 286 367 2.2E-30 T 11-10-2018 syc1794_c c44775d7068993030052caa230f4fe9d 372 SUPERFAMILY SSF103025 10 286 8.95E-91 T 11-10-2018 syc1794_c c44775d7068993030052caa230f4fe9d 372 PIRSF PIRSF006487 3 372 1.1E-87 T 11-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 syc1794_c c44775d7068993030052caa230f4fe9d 372 Pfam PF01571 Aminomethyltransferase folate-binding domain 14 264 1.4E-80 T 11-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain syc1794_c c44775d7068993030052caa230f4fe9d 372 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 11 367 1.3E-131 T 11-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 syc1794_c c44775d7068993030052caa230f4fe9d 372 Gene3D G3DSA:3.30.1360.120 12 241 1.3E-74 T 11-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 syc1794_c c44775d7068993030052caa230f4fe9d 372 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 272 362 1.1E-26 T 11-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 syc1794_c c44775d7068993030052caa230f4fe9d 372 Gene3D G3DSA:4.10.1250.10 242 285 3.2E-17 T 11-10-2018 syc1794_c c44775d7068993030052caa230f4fe9d 372 SUPERFAMILY SSF101790 279 371 7.03E-29 T 11-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal syc1794_c c44775d7068993030052caa230f4fe9d 372 Hamap MF_00259 Aminomethyltransferase [gcvT]. 8 368 44.015 T 11-10-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 syc0838_d 6804f50821b8d3acebd3bf4bfd885e61 184 Pfam PF07176 Alpha/beta hydrolase of unknown function (DUF1400) 24 146 3.0E-17 T 11-10-2018 IPR010802 Domain of unknown function DUF1400 syc0836_d 1d2b9a69cf4dde9e5ff89893d7c92f1e 307 PRINTS PR00681 Ribosomal protein S1 signature 32 50 9.8E-14 T 11-10-2018 syc0836_d 1d2b9a69cf4dde9e5ff89893d7c92f1e 307 PRINTS PR00681 Ribosomal protein S1 signature 98 117 9.8E-14 T 11-10-2018 syc0836_d 1d2b9a69cf4dde9e5ff89893d7c92f1e 307 PRINTS PR00681 Ribosomal protein S1 signature 217 238 9.8E-14 T 11-10-2018 syc0836_d 1d2b9a69cf4dde9e5ff89893d7c92f1e 307 PRINTS PR00681 Ribosomal protein S1 signature 50 64 9.8E-14 T 11-10-2018 syc0836_d 1d2b9a69cf4dde9e5ff89893d7c92f1e 307 PRINTS PR00681 Ribosomal protein S1 signature 122 138 9.8E-14 T 11-10-2018 syc0836_d 1d2b9a69cf4dde9e5ff89893d7c92f1e 307 SUPERFAMILY SSF50249 27 126 4.68E-19 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold syc0836_d 1d2b9a69cf4dde9e5ff89893d7c92f1e 307 SUPERFAMILY SSF50249 116 187 1.27E-11 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold syc0836_d 1d2b9a69cf4dde9e5ff89893d7c92f1e 307 Gene3D G3DSA:2.40.50.140 194 274 8.1E-27 T 11-10-2018 syc0836_d 1d2b9a69cf4dde9e5ff89893d7c92f1e 307 SMART SM00316 117 183 6.5E-11 T 11-10-2018 IPR022967 RNA-binding domain, S1 syc0836_d 1d2b9a69cf4dde9e5ff89893d7c92f1e 307 SMART SM00316 30 101 4.6E-15 T 11-10-2018 IPR022967 RNA-binding domain, S1 syc0836_d 1d2b9a69cf4dde9e5ff89893d7c92f1e 307 SMART SM00316 195 265 2.2E-25 T 11-10-2018 IPR022967 RNA-binding domain, S1 syc0836_d 1d2b9a69cf4dde9e5ff89893d7c92f1e 307 Pfam PF00575 S1 RNA binding domain 194 265 4.1E-21 T 11-10-2018 IPR003029 S1 domain GO:0003676 syc0836_d 1d2b9a69cf4dde9e5ff89893d7c92f1e 307 Pfam PF00575 S1 RNA binding domain 117 183 1.6E-14 T 11-10-2018 IPR003029 S1 domain GO:0003676 syc0836_d 1d2b9a69cf4dde9e5ff89893d7c92f1e 307 Pfam PF00575 S1 RNA binding domain 30 101 8.5E-10 T 11-10-2018 IPR003029 S1 domain GO:0003676 syc0836_d 1d2b9a69cf4dde9e5ff89893d7c92f1e 307 SUPERFAMILY SSF50249 194 275 6.64E-25 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold syc0836_d 1d2b9a69cf4dde9e5ff89893d7c92f1e 307 Gene3D G3DSA:2.40.50.140 15 113 1.3E-16 T 11-10-2018 syc0836_d 1d2b9a69cf4dde9e5ff89893d7c92f1e 307 Gene3D G3DSA:2.40.50.140 114 193 1.3E-10 T 11-10-2018 syc1228_c 76a3d0ab6a3405d533017861f5dbdaa8 102 Gene3D G3DSA:3.30.70.1710 1 102 5.9E-31 T 11-10-2018 syc1228_c 76a3d0ab6a3405d533017861f5dbdaa8 102 SMART SM00877 3 81 2.1E-21 T 11-10-2018 IPR000249 Microcompartment protein, bacteria syc1228_c 76a3d0ab6a3405d533017861f5dbdaa8 102 SUPERFAMILY SSF143414 4 99 4.58E-27 T 11-10-2018 IPR037233 CcmK-like superfamily syc1228_c 76a3d0ab6a3405d533017861f5dbdaa8 102 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 4 64 3.0E-20 T 11-10-2018 syc1228_c 76a3d0ab6a3405d533017861f5dbdaa8 102 Pfam PF00936 BMC domain 4 81 2.1E-22 T 11-10-2018 IPR000249 Microcompartment protein, bacteria syc0831_c 6e11bd8b8e3b66d315d6dc37ce10f021 35 Pfam PF05151 Photosystem II reaction centre M protein (PsbM) 1 31 3.7E-18 T 11-10-2018 IPR007826 Photosystem II PsbM GO:0009523|GO:0015979|GO:0016021|GO:0019684 syc0831_c 6e11bd8b8e3b66d315d6dc37ce10f021 35 Hamap MF_00438 Photosystem II reaction center protein M [psbM]. 1 34 15.525 T 11-10-2018 IPR007826 Photosystem II PsbM GO:0009523|GO:0015979|GO:0016021|GO:0019684 syc0831_c 6e11bd8b8e3b66d315d6dc37ce10f021 35 SUPERFAMILY SSF161033 1 33 2.22E-13 T 11-10-2018 IPR037269 Photosystem II PsbM superfamily GO:0019684 syc0831_c 6e11bd8b8e3b66d315d6dc37ce10f021 35 TIGRFAM TIGR03038 PS_II_psbM: photosystem II reaction center protein PsbM 1 33 5.2E-21 T 11-10-2018 IPR007826 Photosystem II PsbM GO:0009523|GO:0015979|GO:0016021|GO:0019684 syc0139_c 73d941bcbe9d29ea872cc38374d62d83 883 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 4 635 9.5E-249 T 11-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 syc0139_c 73d941bcbe9d29ea872cc38374d62d83 883 SMART SM00437 273 535 1.4E-132 T 11-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 syc0139_c 73d941bcbe9d29ea872cc38374d62d83 883 SUPERFAMILY SSF56712 2 586 7.06E-187 T 11-10-2018 IPR023405 DNA topoisomerase, type IA, core domain syc0139_c 73d941bcbe9d29ea872cc38374d62d83 883 Hamap MF_00952 DNA topoisomerase 1 [topA]. 2 746 57.221 T 11-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 syc0139_c 73d941bcbe9d29ea872cc38374d62d83 883 Gene3D G3DSA:3.40.50.140 2 146 1.1E-58 T 11-10-2018 syc0139_c 73d941bcbe9d29ea872cc38374d62d83 883 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 315 324 4.9E-35 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 syc0139_c 73d941bcbe9d29ea872cc38374d62d83 883 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 90 103 4.9E-35 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 syc0139_c 73d941bcbe9d29ea872cc38374d62d83 883 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 174 192 4.9E-35 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 syc0139_c 73d941bcbe9d29ea872cc38374d62d83 883 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 392 408 4.9E-35 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 syc0139_c 73d941bcbe9d29ea872cc38374d62d83 883 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 498 512 4.9E-35 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 syc0139_c 73d941bcbe9d29ea872cc38374d62d83 883 Pfam PF01751 Toprim domain 4 125 1.5E-28 T 11-10-2018 IPR006171 TOPRIM domain syc0139_c 73d941bcbe9d29ea872cc38374d62d83 883 Gene3D G3DSA:1.10.290.10 281 407 3.1E-165 T 11-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 syc0139_c 73d941bcbe9d29ea872cc38374d62d83 883 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 310 324 - T 11-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 syc0139_c 73d941bcbe9d29ea872cc38374d62d83 883 Pfam PF13368 Topoisomerase C-terminal repeat 605 656 2.3E-5 T 11-10-2018 IPR025589 Topoisomerase C-terminal repeat syc0139_c 73d941bcbe9d29ea872cc38374d62d83 883 Pfam PF13368 Topoisomerase C-terminal repeat 663 723 4.9E-16 T 11-10-2018 IPR025589 Topoisomerase C-terminal repeat syc0139_c 73d941bcbe9d29ea872cc38374d62d83 883 Pfam PF13368 Topoisomerase C-terminal repeat 725 784 4.7E-20 T 11-10-2018 IPR025589 Topoisomerase C-terminal repeat syc0139_c 73d941bcbe9d29ea872cc38374d62d83 883 Pfam PF13368 Topoisomerase C-terminal repeat 795 845 2.9E-18 T 11-10-2018 IPR025589 Topoisomerase C-terminal repeat syc0139_c 73d941bcbe9d29ea872cc38374d62d83 883 Gene3D G3DSA:1.10.460.10 147 575 3.1E-165 T 11-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 syc0139_c 73d941bcbe9d29ea872cc38374d62d83 883 Gene3D G3DSA:2.70.20.10 196 482 3.1E-165 T 11-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 syc0139_c 73d941bcbe9d29ea872cc38374d62d83 883 SMART SM00436 116 204 6.5E-50 T 11-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 syc0139_c 73d941bcbe9d29ea872cc38374d62d83 883 Pfam PF01131 DNA topoisomerase 140 572 6.0E-121 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 syc0139_c 73d941bcbe9d29ea872cc38374d62d83 883 SMART SM00493 2 116 1.5E-39 T 11-10-2018 IPR006171 TOPRIM domain syc0251_c 798811aa6ab00019c39f251de88578d6 162 PIRSF PIRSF006276 5 162 4.5E-20 T 11-10-2018 IPR006015 Universal stress protein A syc0251_c 798811aa6ab00019c39f251de88578d6 162 SUPERFAMILY SSF52402 7 159 5.53E-34 T 11-10-2018 syc0251_c 798811aa6ab00019c39f251de88578d6 162 Gene3D G3DSA:3.40.50.620 3 159 3.1E-36 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold syc0251_c 798811aa6ab00019c39f251de88578d6 162 PRINTS PR01438 Universal stress protein signature 119 131 7.4E-15 T 11-10-2018 IPR006015 Universal stress protein A syc0251_c 798811aa6ab00019c39f251de88578d6 162 PRINTS PR01438 Universal stress protein signature 7 25 7.4E-15 T 11-10-2018 IPR006015 Universal stress protein A syc0251_c 798811aa6ab00019c39f251de88578d6 162 PRINTS PR01438 Universal stress protein signature 137 159 7.4E-15 T 11-10-2018 IPR006015 Universal stress protein A syc0251_c 798811aa6ab00019c39f251de88578d6 162 Pfam PF00582 Universal stress protein family 7 158 2.1E-29 T 11-10-2018 IPR006016 UspA syc0124_d 980ae15e0d35b31bc18dcb6a978ee5af 561 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 9 207 5.2E-81 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 syc0124_d 980ae15e0d35b31bc18dcb6a978ee5af 561 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 14 206 1.5E-84 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 syc0124_d 980ae15e0d35b31bc18dcb6a978ee5af 561 SUPERFAMILY SSF142695 213 386 8.24E-71 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 syc0124_d 980ae15e0d35b31bc18dcb6a978ee5af 561 Hamap MF_01283 Riboflavin biosynthesis protein RibBA [ribBA]. 8 405 53.279 T 11-10-2018 IPR016299 Riboflavin biosynthesis protein RibBA GO:0009231 KEGG: 00740+3.5.4.25+4.1.99.12|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 syc0124_d 980ae15e0d35b31bc18dcb6a978ee5af 561 Gene3D G3DSA:3.40.50.10990 215 387 9.0E-76 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 syc0124_d 980ae15e0d35b31bc18dcb6a978ee5af 561 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 212 409 42.142 T 11-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 syc0124_d 980ae15e0d35b31bc18dcb6a978ee5af 561 SUPERFAMILY SSF55821 10 214 1.3E-84 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily syc0124_d 980ae15e0d35b31bc18dcb6a978ee5af 561 Pfam PF00925 GTP cyclohydrolase II 220 383 2.8E-75 T 11-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 syc0124_d 980ae15e0d35b31bc18dcb6a978ee5af 561 Gene3D G3DSA:3.90.870.10 3 214 1.9E-89 T 11-10-2018 syc0124_d 980ae15e0d35b31bc18dcb6a978ee5af 561 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 220 407 2.4E-76 T 11-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 syc0124_d 980ae15e0d35b31bc18dcb6a978ee5af 561 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 7 211 39.6 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 syc0193_c bb15a3330d34efc270b8273fc44ca91f 167 SUPERFAMILY SSF141571 37 144 2.88E-23 T 11-10-2018 syc0193_c bb15a3330d34efc270b8273fc44ca91f 167 Gene3D G3DSA:2.160.20.100 36 167 2.7E-34 T 11-10-2018 syc0193_c bb15a3330d34efc270b8273fc44ca91f 167 Pfam PF00805 Pentapeptide repeats (8 copies) 85 110 9.5E-6 T 11-10-2018 IPR001646 Pentapeptide repeat syc0193_c bb15a3330d34efc270b8273fc44ca91f 167 Pfam PF00805 Pentapeptide repeats (8 copies) 44 78 4.9E-5 T 11-10-2018 IPR001646 Pentapeptide repeat syc0519_c 8b4035389483d727f9e42501a5120313 104 Pfam PF04025 Domain of unknown function (DUF370) 22 94 3.4E-33 T 11-10-2018 IPR007169 Extracellular matrix regulatory protein A syc0519_c 8b4035389483d727f9e42501a5120313 104 Hamap MF_01503 UPF0296 protein . 20 104 27.38 T 11-10-2018 IPR007169 Extracellular matrix regulatory protein A syc0519_c 8b4035389483d727f9e42501a5120313 104 ProDom PD063023 UPF0296 YLZA BA4010/GBAA4010/BAS3723 BLI01788/BL02292 BT9727_3613 BC3870 TM1690 CBDBA43 SYC0519_C BCE33L3631 22 94 2.0E-35 T 11-10-2018 IPR007169 Extracellular matrix regulatory protein A syc1364_d 0a3177e29fb1caecc9e13165ffd26a53 314 Pfam PF02355 Protein export membrane protein 113 301 1.2E-64 T 11-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial syc1364_d 0a3177e29fb1caecc9e13165ffd26a53 314 Pfam PF07549 SecD/SecF GG Motif 37 57 1.6E-4 T 11-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site syc1364_d 0a3177e29fb1caecc9e13165ffd26a53 314 SUPERFAMILY SSF82866 99 303 3.14E-35 T 11-10-2018 syc1364_d 0a3177e29fb1caecc9e13165ffd26a53 314 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 3 303 26.846 T 11-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 syc1364_d 0a3177e29fb1caecc9e13165ffd26a53 314 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 39 292 1.4E-74 T 11-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 syc1364_d 0a3177e29fb1caecc9e13165ffd26a53 314 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 79 289 1.9E-53 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial syc1364_d 0a3177e29fb1caecc9e13165ffd26a53 314 Gene3D G3DSA:1.20.1640.10 108 309 2.1E-10 T 11-10-2018 syc1364_d 0a3177e29fb1caecc9e13165ffd26a53 314 PRINTS PR01755 Bacterial translocase SecF protein signature 208 226 8.3E-23 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial syc1364_d 0a3177e29fb1caecc9e13165ffd26a53 314 PRINTS PR01755 Bacterial translocase SecF protein signature 240 255 8.3E-23 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial syc1364_d 0a3177e29fb1caecc9e13165ffd26a53 314 PRINTS PR01755 Bacterial translocase SecF protein signature 36 51 8.3E-23 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial syc1364_d 0a3177e29fb1caecc9e13165ffd26a53 314 PRINTS PR01755 Bacterial translocase SecF protein signature 156 170 8.3E-23 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial syc2039_d 7453cfc115d2b6398fc6893ea251b53f 305 Pfam PF08241 Methyltransferase domain 141 239 2.1E-18 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 syc2039_d 7453cfc115d2b6398fc6893ea251b53f 305 Gene3D G3DSA:3.40.50.150 102 297 4.9E-30 T 11-10-2018 syc2039_d 7453cfc115d2b6398fc6893ea251b53f 305 SUPERFAMILY SSF53335 124 293 6.69E-32 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase syc2214_d 23ae44166db898aca6645a8b683614a9 535 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 1 511 5.2E-184 T 11-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 syc2214_d 23ae44166db898aca6645a8b683614a9 535 SUPERFAMILY SSF51905 1 378 2.32E-53 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc2214_d 23ae44166db898aca6645a8b683614a9 535 Gene3D G3DSA:3.90.700.10 225 335 1.5E-141 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 syc2214_d 23ae44166db898aca6645a8b683614a9 535 Pfam PF02910 Fumarate reductase flavoprotein C-term 413 523 6.7E-14 T 11-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 syc2214_d 23ae44166db898aca6645a8b683614a9 535 Gene3D G3DSA:1.20.58.100 389 511 2.0E-29 T 11-10-2018 syc2214_d 23ae44166db898aca6645a8b683614a9 535 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 332 354 7.8E-6 T 11-10-2018 syc2214_d 23ae44166db898aca6645a8b683614a9 535 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 1 10 7.8E-6 T 11-10-2018 syc2214_d 23ae44166db898aca6645a8b683614a9 535 SUPERFAMILY SSF46977 409 529 1.44E-27 T 11-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 syc2214_d 23ae44166db898aca6645a8b683614a9 535 Pfam PF00890 FAD binding domain 1 369 2.4E-91 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 syc2214_d 23ae44166db898aca6645a8b683614a9 535 SUPERFAMILY SSF56425 215 330 3.74E-40 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 syc2214_d 23ae44166db898aca6645a8b683614a9 535 Gene3D G3DSA:3.50.50.60 1 378 1.5E-141 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc1888_d 00c2c79a62cde60155c1bb4653dc7f81 309 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 245 290 8.0E-20 T 11-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 syc1888_d 00c2c79a62cde60155c1bb4653dc7f81 309 Gene3D G3DSA:2.170.120.12 49 169 4.4E-76 T 11-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 syc1888_d 00c2c79a62cde60155c1bb4653dc7f81 309 SUPERFAMILY SSF47789 243 304 2.22E-21 T 11-10-2018 syc1888_d 00c2c79a62cde60155c1bb4653dc7f81 309 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 19 305 8.5E-104 T 11-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 syc1888_d 00c2c79a62cde60155c1bb4653dc7f81 309 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 1 306 35.081 T 11-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 syc1888_d 00c2c79a62cde60155c1bb4653dc7f81 309 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 60 149 9.5E-21 T 11-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 syc1888_d 00c2c79a62cde60155c1bb4653dc7f81 309 SUPERFAMILY SSF55257 3 225 3.63E-30 T 11-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 syc1888_d 00c2c79a62cde60155c1bb4653dc7f81 309 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 238 297 2.9E-24 T 11-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 syc1888_d 00c2c79a62cde60155c1bb4653dc7f81 309 SMART SM00662 19 226 1.2E-68 T 11-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 syc1888_d 00c2c79a62cde60155c1bb4653dc7f81 309 Gene3D G3DSA:1.10.150.20 232 306 7.8E-27 T 11-10-2018 syc1888_d 00c2c79a62cde60155c1bb4653dc7f81 309 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 25 218 2.1E-20 T 11-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 syc1888_d 00c2c79a62cde60155c1bb4653dc7f81 309 Gene3D G3DSA:3.30.1360.10 17 217 4.4E-76 T 11-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 syc1888_d 00c2c79a62cde60155c1bb4653dc7f81 309 SUPERFAMILY SSF56553 49 170 2.88E-40 T 11-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 syc0222_c 46685d4b854009453f0b9e2f92565d42 206 PIRSF PIRSF000370 10 206 1.9E-57 T 11-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 syc0222_c 46685d4b854009453f0b9e2f92565d42 206 Pfam PF04055 Radical SAM superfamily 36 113 1.1E-10 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 syc0222_c 46685d4b854009453f0b9e2f92565d42 206 Pfam PF13394 4Fe-4S single cluster domain 34 113 1.9E-14 T 11-10-2018 syc0222_c 46685d4b854009453f0b9e2f92565d42 206 Gene3D G3DSA:3.20.20.70 11 206 1.2E-54 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 syc0222_c 46685d4b854009453f0b9e2f92565d42 206 SUPERFAMILY SSF102114 29 112 1.23E-10 T 11-10-2018 syc0222_c 46685d4b854009453f0b9e2f92565d42 206 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 12 206 35.82 T 11-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 syc0724_c fd8d49f091c6d6aa40f6536830f40fc2 243 Gene3D G3DSA:3.40.50.300 3 240 4.4E-61 T 11-10-2018 syc0724_c fd8d49f091c6d6aa40f6536830f40fc2 243 SUPERFAMILY SSF52540 5 236 9.82E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0724_c fd8d49f091c6d6aa40f6536830f40fc2 243 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 syc0724_c fd8d49f091c6d6aa40f6536830f40fc2 243 SMART SM00382 32 218 2.3E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain syc0724_c fd8d49f091c6d6aa40f6536830f40fc2 243 Pfam PF00005 ABC transporter 24 168 2.8E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 syc1418_d bbbb6508243581b4383d2188ff05ac98 694 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 21 113 7.4E-17 T 11-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 syc1418_d bbbb6508243581b4383d2188ff05ac98 694 SUPERFAMILY SSF51011 597 693 5.83E-22 T 11-10-2018 syc1418_d bbbb6508243581b4383d2188ff05ac98 694 SUPERFAMILY SSF81296 16 156 1.32E-41 T 11-10-2018 IPR014756 Immunoglobulin E-set syc1418_d bbbb6508243581b4383d2188ff05ac98 694 SUPERFAMILY SSF51445 142 575 1.53E-127 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily syc1418_d bbbb6508243581b4383d2188ff05ac98 694 Gene3D G3DSA:3.20.20.80 144 587 1.0E-180 T 11-10-2018 syc1418_d bbbb6508243581b4383d2188ff05ac98 694 Gene3D G3DSA:2.60.40.1180 597 693 3.9E-16 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta syc1418_d bbbb6508243581b4383d2188ff05ac98 694 Pfam PF00128 Alpha amylase, catalytic domain 187 305 5.0E-15 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 syc1418_d bbbb6508243581b4383d2188ff05ac98 694 Gene3D G3DSA:2.60.40.10 3 141 2.2E-41 T 11-10-2018 IPR013783 Immunoglobulin-like fold syc1418_d bbbb6508243581b4383d2188ff05ac98 694 SMART SM00642 167 567 1.5E-9 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 syc1418_d bbbb6508243581b4383d2188ff05ac98 694 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 17 690 4.1E-223 T 11-10-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 syc0390_c 1126f7618e949650d45eafcae3edcb70 300 Gene3D G3DSA:3.40.50.720 1 275 3.6E-49 T 11-10-2018 syc0390_c 1126f7618e949650d45eafcae3edcb70 300 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 208 5.9E-22 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 syc0390_c 1126f7618e949650d45eafcae3edcb70 300 SUPERFAMILY SSF51735 1 281 9.82E-52 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily syc0860_c 7848cc7dbbdf89bb41ee0d35e348f1e1 199 Gene3D G3DSA:3.10.300.10 12 196 2.5E-49 T 11-10-2018 IPR036995 Methylpurine-DNA glycosylase superfamily GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 syc0860_c 7848cc7dbbdf89bb41ee0d35e348f1e1 199 TIGRFAM TIGR00567 3mg: DNA-3-methyladenine glycosylase 15 184 2.6E-39 T 11-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 syc0860_c 7848cc7dbbdf89bb41ee0d35e348f1e1 199 Hamap MF_00527 Putative 3-methyladenine DNA glycosylase. 12 184 25.824 T 11-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 syc0860_c 7848cc7dbbdf89bb41ee0d35e348f1e1 199 Pfam PF02245 Methylpurine-DNA glycosylase (MPG) 16 181 4.8E-50 T 11-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 syc0860_c 7848cc7dbbdf89bb41ee0d35e348f1e1 199 SUPERFAMILY SSF50486 15 190 2.98E-54 T 11-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 syc2503_d 840f68518b01c1e6d54df7c075790e6a 766 Gene3D G3DSA:1.10.486.10 395 554 3.3E-52 T 11-10-2018 syc2503_d 840f68518b01c1e6d54df7c075790e6a 766 Gene3D G3DSA:1.10.10.160 107 203 1.5E-52 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily syc2503_d 840f68518b01c1e6d54df7c075790e6a 766 SUPERFAMILY SSF52540 4 659 1.29E-100 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc2503_d 840f68518b01c1e6d54df7c075790e6a 766 Pfam PF13361 UvrD-like helicase C-terminal domain 290 649 1.7E-29 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 syc2503_d 840f68518b01c1e6d54df7c075790e6a 766 Gene3D G3DSA:3.40.50.300 294 659 3.3E-52 T 11-10-2018 syc2503_d 840f68518b01c1e6d54df7c075790e6a 766 Gene3D G3DSA:3.40.50.300 6 280 1.5E-52 T 11-10-2018 syc2503_d 840f68518b01c1e6d54df7c075790e6a 766 Pfam PF00580 UvrD/REP helicase N-terminal domain 5 283 2.4E-39 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 syc0689_c 7935a946bf2f2fb99f61616ed13e018f 352 SUPERFAMILY SSF56042 176 348 8.67E-58 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily syc0689_c 7935a946bf2f2fb99f61616ed13e018f 352 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 12 343 6.4E-140 T 11-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 syc0689_c 7935a946bf2f2fb99f61616ed13e018f 352 Gene3D G3DSA:3.90.650.10 176 348 2.4E-62 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily syc0689_c 7935a946bf2f2fb99f61616ed13e018f 352 Pfam PF02769 AIR synthase related protein, C-terminal domain 183 346 2.0E-35 T 11-10-2018 IPR010918 PurM-like, C-terminal domain syc0689_c 7935a946bf2f2fb99f61616ed13e018f 352 Pfam PF00586 AIR synthase related protein, N-terminal domain 66 168 3.7E-17 T 11-10-2018 IPR016188 PurM-like, N-terminal domain syc0689_c 7935a946bf2f2fb99f61616ed13e018f 352 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 12 351 45.878 T 11-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 syc0689_c 7935a946bf2f2fb99f61616ed13e018f 352 SUPERFAMILY SSF55326 13 174 6.73E-51 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily syc0689_c 7935a946bf2f2fb99f61616ed13e018f 352 Gene3D G3DSA:3.30.1330.10 11 175 1.6E-66 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily syc1236_d b0978eac550db2f33d0a3aac165f9edb 679 Pfam PF12826 Helix-hairpin-helix motif 518 581 2.2E-22 T 11-10-2018 syc1236_d b0978eac550db2f33d0a3aac165f9edb 679 Gene3D G3DSA:3.30.470.90 77 327 9.7E-95 T 11-10-2018 syc1236_d b0978eac550db2f33d0a3aac165f9edb 679 Hamap MF_01588 DNA ligase [ligA]. 11 674 50.435 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 syc1236_d b0978eac550db2f33d0a3aac165f9edb 679 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 416 442 2.9E-9 T 11-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 syc1236_d b0978eac550db2f33d0a3aac165f9edb 679 Gene3D G3DSA:1.10.150.20 440 512 1.7E-27 T 11-10-2018 syc1236_d b0978eac550db2f33d0a3aac165f9edb 679 SUPERFAMILY SSF47781 413 591 1.37E-56 T 11-10-2018 IPR010994 RuvA domain 2-like syc1236_d b0978eac550db2f33d0a3aac165f9edb 679 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 13 326 6.3E-127 T 11-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 syc1236_d b0978eac550db2f33d0a3aac165f9edb 679 Gene3D G3DSA:2.20.70.80 401 438 9.3E-12 T 11-10-2018 syc1236_d b0978eac550db2f33d0a3aac165f9edb 679 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 20 670 2.5E-255 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 syc1236_d b0978eac550db2f33d0a3aac165f9edb 679 SUPERFAMILY SSF50249 327 409 1.28E-26 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold syc1236_d b0978eac550db2f33d0a3aac165f9edb 679 PIRSF PIRSF001604 6 678 1.7E-241 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 syc1236_d b0978eac550db2f33d0a3aac165f9edb 679 SMART SM00278 454 473 27.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 syc1236_d b0978eac550db2f33d0a3aac165f9edb 679 SMART SM00278 552 571 50.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 syc1236_d b0978eac550db2f33d0a3aac165f9edb 679 SMART SM00278 488 507 10.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 syc1236_d b0978eac550db2f33d0a3aac165f9edb 679 Pfam PF14520 Helix-hairpin-helix domain 454 508 3.8E-8 T 11-10-2018 syc1236_d b0978eac550db2f33d0a3aac165f9edb 679 Gene3D G3DSA:1.10.150.20 513 593 3.0E-24 T 11-10-2018 syc1236_d b0978eac550db2f33d0a3aac165f9edb 679 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 125 154 - T 11-10-2018 IPR018239 NAD-dependent DNA ligase, active site syc1236_d b0978eac550db2f33d0a3aac165f9edb 679 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 340 355 - T 11-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site syc1236_d b0978eac550db2f33d0a3aac165f9edb 679 SMART SM00532 12 456 4.3E-248 T 11-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 syc1236_d b0978eac550db2f33d0a3aac165f9edb 679 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 331 407 4.3E-34 T 11-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 syc1236_d b0978eac550db2f33d0a3aac165f9edb 679 SMART SM00292 600 677 4.9E-16 T 11-10-2018 IPR001357 BRCT domain syc1236_d b0978eac550db2f33d0a3aac165f9edb 679 Gene3D G3DSA:3.40.50.10190 599 678 2.1E-27 T 11-10-2018 IPR036420 BRCT domain superfamily syc1236_d b0978eac550db2f33d0a3aac165f9edb 679 SUPERFAMILY SSF56091 11 325 5.94E-116 T 11-10-2018 syc1236_d b0978eac550db2f33d0a3aac165f9edb 679 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 602 674 3.7E-16 T 11-10-2018 IPR001357 BRCT domain syc1236_d b0978eac550db2f33d0a3aac165f9edb 679 Gene3D G3DSA:1.10.287.610 1 76 7.0E-28 T 11-10-2018 syc1236_d b0978eac550db2f33d0a3aac165f9edb 679 SUPERFAMILY SSF52113 598 676 4.22E-21 T 11-10-2018 IPR036420 BRCT domain superfamily syc1236_d b0978eac550db2f33d0a3aac165f9edb 679 Gene3D G3DSA:2.40.50.140 328 400 4.7E-31 T 11-10-2018 syc1128_c 6bbaa020544775ee526b42a012269e4e 469 Pfam PF01933 Uncharacterised protein family UPF0052 153 439 7.9E-109 T 11-10-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 syc1128_c 6bbaa020544775ee526b42a012269e4e 469 SUPERFAMILY SSF142338 149 461 7.98E-105 T 11-10-2018 syc1128_c 6bbaa020544775ee526b42a012269e4e 469 Gene3D G3DSA:3.40.50.12300 148 468 1.1E-124 T 11-10-2018 IPR038136 Gluconeogenesis factor superfamily syc1128_c 6bbaa020544775ee526b42a012269e4e 469 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 153 463 1.9E-113 T 11-10-2018 IPR010119 Gluconeogenesis factor syc1128_c 6bbaa020544775ee526b42a012269e4e 469 Hamap MF_00973 Gluconeogenesis factor. 149 466 36.842 T 11-10-2018 IPR010119 Gluconeogenesis factor syc1268_d 5647357d5d9b9a71cedd0132b29298d1 353 SUPERFAMILY SSF51735 4 172 1.81E-60 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily syc1268_d 5647357d5d9b9a71cedd0132b29298d1 353 SUPERFAMILY SSF55347 156 319 3.09E-72 T 11-10-2018 syc1268_d 5647357d5d9b9a71cedd0132b29298d1 353 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 4 103 1.6E-35 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc1268_d 5647357d5d9b9a71cedd0132b29298d1 353 Gene3D G3DSA:3.30.360.10 156 321 8.7E-148 T 11-10-2018 syc1268_d 5647357d5d9b9a71cedd0132b29298d1 353 SMART SM00846 4 157 1.1E-86 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc1268_d 5647357d5d9b9a71cedd0132b29298d1 353 Gene3D G3DSA:3.40.50.720 5 335 8.7E-148 T 11-10-2018 syc1268_d 5647357d5d9b9a71cedd0132b29298d1 353 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 155 162 - T 11-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc1268_d 5647357d5d9b9a71cedd0132b29298d1 353 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 235 252 7.1E-45 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc1268_d 5647357d5d9b9a71cedd0132b29298d1 353 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 110 123 7.1E-45 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc1268_d 5647357d5d9b9a71cedd0132b29298d1 353 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 178 194 7.1E-45 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc1268_d 5647357d5d9b9a71cedd0132b29298d1 353 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 275 290 7.1E-45 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc1268_d 5647357d5d9b9a71cedd0132b29298d1 353 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 151 169 7.1E-45 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc1268_d 5647357d5d9b9a71cedd0132b29298d1 353 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 162 319 1.6E-66 T 11-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc1268_d 5647357d5d9b9a71cedd0132b29298d1 353 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 5 331 8.3E-132 T 11-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc1268_d 5647357d5d9b9a71cedd0132b29298d1 353 PIRSF PIRSF000149 2 341 1.4E-129 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc1934_c 796937088593a581a13148652561733b 409 Gene3D G3DSA:3.90.1150.10 46 404 9.8E-157 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 syc1934_c 796937088593a581a13148652561733b 409 Gene3D G3DSA:3.40.640.10 60 305 9.8E-157 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 syc1934_c 796937088593a581a13148652561733b 409 Pfam PF00266 Aminotransferase class-V 51 398 5.1E-42 T 11-10-2018 IPR000192 Aminotransferase class V domain syc1934_c 796937088593a581a13148652561733b 409 SUPERFAMILY SSF53383 47 406 3.09E-106 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase syc1934_c 796937088593a581a13148652561733b 409 PIRSF PIRSF000524 44 408 6.9E-120 T 11-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 syc0906_c 40a410804bdfeaa3e2eaff8f0348c120 426 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 6 426 48.693 T 11-10-2018 IPR034373 Adenosylhomocysteinase GO:0004013|GO:0019510|GO:0051287 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-2408508|Reactome: R-HSA-5578997 syc0906_c 40a410804bdfeaa3e2eaff8f0348c120 426 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 11 143 9.4E-31 T 11-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 syc0906_c 40a410804bdfeaa3e2eaff8f0348c120 426 SUPERFAMILY SSF52283 9 426 2.04E-93 T 11-10-2018 syc0906_c 40a410804bdfeaa3e2eaff8f0348c120 426 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 193 353 4.1E-58 T 11-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 syc0906_c 40a410804bdfeaa3e2eaff8f0348c120 426 SMART SM00997 193 354 3.3E-110 T 11-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 syc0906_c 40a410804bdfeaa3e2eaff8f0348c120 426 Gene3D G3DSA:3.40.50.1480 13 415 5.5E-173 T 11-10-2018 syc0906_c 40a410804bdfeaa3e2eaff8f0348c120 426 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 147 422 1.2E-29 T 11-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 syc0906_c 40a410804bdfeaa3e2eaff8f0348c120 426 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 11 426 1.1E-198 T 11-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 syc0906_c 40a410804bdfeaa3e2eaff8f0348c120 426 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 82 96 - T 11-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 syc0906_c 40a410804bdfeaa3e2eaff8f0348c120 426 Gene3D G3DSA:3.40.50.720 195 354 5.5E-173 T 11-10-2018 syc0906_c 40a410804bdfeaa3e2eaff8f0348c120 426 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 215 231 - T 11-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 syc0906_c 40a410804bdfeaa3e2eaff8f0348c120 426 PIRSF PIRSF001109 1 426 2.4E-185 T 11-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 syc0906_c 40a410804bdfeaa3e2eaff8f0348c120 426 SUPERFAMILY SSF51735 193 355 3.73E-68 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily syc0906_c 40a410804bdfeaa3e2eaff8f0348c120 426 SMART SM00996 10 425 2.5E-146 T 11-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 syc0010_c 5ebbb2b867aaba5aa9ce08f4313f3da2 330 Gene3D G3DSA:3.40.50.720 1 182 9.4E-79 T 11-10-2018 syc0010_c 5ebbb2b867aaba5aa9ce08f4313f3da2 330 SUPERFAMILY SSF51735 3 183 1.52E-75 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily syc0010_c 5ebbb2b867aaba5aa9ce08f4313f3da2 330 PIRSF PIRSF000116 3 206 6.0E-41 T 11-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 syc0010_c 5ebbb2b867aaba5aa9ce08f4313f3da2 330 PIRSF PIRSF000116 202 330 3.2E-13 T 11-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 syc0010_c 5ebbb2b867aaba5aa9ce08f4313f3da2 330 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 15 328 9.9E-143 T 11-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 syc0010_c 5ebbb2b867aaba5aa9ce08f4313f3da2 330 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 2 329 45.265 T 11-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 syc0010_c 5ebbb2b867aaba5aa9ce08f4313f3da2 330 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 184 327 2.3E-63 T 11-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 syc0010_c 5ebbb2b867aaba5aa9ce08f4313f3da2 330 Gene3D G3DSA:1.10.3730.40 183 330 1.8E-67 T 11-10-2018 syc0010_c 5ebbb2b867aaba5aa9ce08f4313f3da2 330 SUPERFAMILY SSF48179 184 328 2.38E-66 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 syc0010_c 5ebbb2b867aaba5aa9ce08f4313f3da2 330 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 15 178 2.4E-78 T 11-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 syc2420_c 3b734aa3c7dbaacafacf3a86cc5cd922 696 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 24 694 39.256 T 11-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 syc2420_c 3b734aa3c7dbaacafacf3a86cc5cd922 696 Gene3D G3DSA:2.70.150.20 120 229 1.4E-26 T 11-10-2018 syc2420_c 3b734aa3c7dbaacafacf3a86cc5cd922 696 SUPERFAMILY SSF81665 46 316 9.55E-9 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 syc2420_c 3b734aa3c7dbaacafacf3a86cc5cd922 696 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 92 615 4.6E-71 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 syc2420_c 3b734aa3c7dbaacafacf3a86cc5cd922 696 SUPERFAMILY SSF56784 310 575 6.66E-40 T 11-10-2018 IPR036412 HAD-like superfamily syc2420_c 3b734aa3c7dbaacafacf3a86cc5cd922 696 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 324 330 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 syc2420_c 3b734aa3c7dbaacafacf3a86cc5cd922 696 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 322 336 5.2E-25 T 11-10-2018 syc2420_c 3b734aa3c7dbaacafacf3a86cc5cd922 696 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 555 567 5.2E-25 T 11-10-2018 syc2420_c 3b734aa3c7dbaacafacf3a86cc5cd922 696 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 479 489 5.2E-25 T 11-10-2018 syc2420_c 3b734aa3c7dbaacafacf3a86cc5cd922 696 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 170 184 5.2E-25 T 11-10-2018 syc2420_c 3b734aa3c7dbaacafacf3a86cc5cd922 696 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 532 551 5.2E-25 T 11-10-2018 syc2420_c 3b734aa3c7dbaacafacf3a86cc5cd922 696 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 26 690 0.0 T 11-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 syc2420_c 3b734aa3c7dbaacafacf3a86cc5cd922 696 Gene3D G3DSA:3.40.1110.10 336 463 9.2E-37 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 syc2420_c 3b734aa3c7dbaacafacf3a86cc5cd922 696 Pfam PF00702 haloacid dehalogenase-like hydrolase 318 546 6.6E-33 T 11-10-2018 syc2420_c 3b734aa3c7dbaacafacf3a86cc5cd922 696 Pfam PF00122 E1-E2 ATPase 124 301 8.7E-33 T 11-10-2018 syc2420_c 3b734aa3c7dbaacafacf3a86cc5cd922 696 SUPERFAMILY SSF81653 128 224 4.32E-20 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 syc1112_d e0bd1819a0690c5b737711a59227d5e6 304 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 8 294 4.0E-120 T 11-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 syc1112_d e0bd1819a0690c5b737711a59227d5e6 304 Pfam PF03462 PCRF domain 3 150 6.2E-52 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 syc1112_d e0bd1819a0690c5b737711a59227d5e6 304 SUPERFAMILY SSF75620 3 297 5.23E-114 T 11-10-2018 syc1112_d e0bd1819a0690c5b737711a59227d5e6 304 SMART SM00937 15 125 2.8E-54 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 syc1112_d e0bd1819a0690c5b737711a59227d5e6 304 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 175 191 - T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 syc1112_d e0bd1819a0690c5b737711a59227d5e6 304 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 1 296 31.115 T 11-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 syc1112_d e0bd1819a0690c5b737711a59227d5e6 304 Gene3D G3DSA:3.30.160.20 156 251 7.6E-95 T 11-10-2018 syc1112_d e0bd1819a0690c5b737711a59227d5e6 304 Gene3D G3DSA:3.30.70.1660 60 289 7.6E-95 T 11-10-2018 syc1112_d e0bd1819a0690c5b737711a59227d5e6 304 Pfam PF00472 RF-1 domain 159 268 6.1E-36 T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 syc0013_d 91016d49f85a56369d32e107d9d66acd 280 Pfam PF11264 Thylakoid formation protein 32 248 8.6E-86 T 11-10-2018 IPR017499 Protein Thf1 GO:0010207|GO:0015979 syc0013_d 91016d49f85a56369d32e107d9d66acd 280 Hamap MF_01843 Protein Thf1 [thf1]. 27 245 32.505 T 11-10-2018 IPR017499 Protein Thf1 GO:0010207|GO:0015979 syc0013_d 91016d49f85a56369d32e107d9d66acd 280 TIGRFAM TIGR03060 PS_II_psb29: photosystem II biogenesis protein Psp29 28 244 7.5E-87 T 11-10-2018 IPR017499 Protein Thf1 GO:0010207|GO:0015979 syc0925_c 8fff8c887c09168c80db885088086d11 590 Pfam PF01476 LysM domain 284 327 1.2E-16 T 11-10-2018 IPR018392 LysM domain syc0925_c 8fff8c887c09168c80db885088086d11 590 Pfam PF01476 LysM domain 146 187 5.3E-10 T 11-10-2018 IPR018392 LysM domain syc0925_c 8fff8c887c09168c80db885088086d11 590 SUPERFAMILY SSF54106 144 188 1.44E-9 T 11-10-2018 syc0925_c 8fff8c887c09168c80db885088086d11 590 Gene3D G3DSA:3.10.350.10 278 335 6.9E-18 T 11-10-2018 IPR036779 LysM domain superfamily syc0925_c 8fff8c887c09168c80db885088086d11 590 Gene3D G3DSA:3.10.350.10 131 196 1.4E-13 T 11-10-2018 IPR036779 LysM domain superfamily syc0925_c 8fff8c887c09168c80db885088086d11 590 SUPERFAMILY SSF54106 283 327 9.29E-12 T 11-10-2018 syc0925_c 8fff8c887c09168c80db885088086d11 590 SUPERFAMILY SSF51261 425 587 3.5E-57 T 11-10-2018 IPR011055 Duplicated hybrid motif syc0925_c 8fff8c887c09168c80db885088086d11 590 Pfam PF01551 Peptidase family M23 487 583 7.9E-35 T 11-10-2018 IPR016047 Peptidase M23 syc0925_c 8fff8c887c09168c80db885088086d11 590 Gene3D G3DSA:2.70.70.10 454 590 4.2E-50 T 11-10-2018 IPR011055 Duplicated hybrid motif syc0925_c 8fff8c887c09168c80db885088086d11 590 SMART SM00257 145 189 1.6E-10 T 11-10-2018 IPR018392 LysM domain syc0925_c 8fff8c887c09168c80db885088086d11 590 SMART SM00257 283 327 1.7E-17 T 11-10-2018 IPR018392 LysM domain syc0935_d 57dd4f1809cc8b374f4180eca29cab1f 391 Gene3D G3DSA:3.30.1490.20 120 192 1.8E-27 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 syc0935_d 57dd4f1809cc8b374f4180eca29cab1f 391 SUPERFAMILY SSF56059 109 312 2.12E-60 T 11-10-2018 syc0935_d 57dd4f1809cc8b374f4180eca29cab1f 391 SUPERFAMILY SSF52440 9 108 1.31E-29 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily syc0935_d 57dd4f1809cc8b374f4180eca29cab1f 391 Hamap MF_01643 Formate-dependent phosphoribosylglycinamide formyltransferase [purT]. 4 389 51.488 T 11-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 syc0935_d 57dd4f1809cc8b374f4180eca29cab1f 391 Pfam PF02222 ATP-grasp domain 119 292 9.8E-57 T 11-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type syc0935_d 57dd4f1809cc8b374f4180eca29cab1f 391 Gene3D G3DSA:3.40.50.20 2 119 3.2E-45 T 11-10-2018 syc0935_d 57dd4f1809cc8b374f4180eca29cab1f 391 Gene3D G3DSA:3.30.470.20 193 388 2.0E-64 T 11-10-2018 syc0935_d 57dd4f1809cc8b374f4180eca29cab1f 391 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 10 389 2.8E-178 T 11-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 syc0935_d 57dd4f1809cc8b374f4180eca29cab1f 391 SUPERFAMILY SSF51246 316 388 1.96E-20 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 syc1704_d 007b0d691cad9ac96c2cf0775cafcb7d 163 SUPERFAMILY SSF49764 20 148 5.76E-33 T 11-10-2018 IPR008978 HSP20-like chaperone syc1704_d 007b0d691cad9ac96c2cf0775cafcb7d 163 Gene3D G3DSA:2.60.40.790 5 148 4.5E-31 T 11-10-2018 IPR008978 HSP20-like chaperone syc1704_d 007b0d691cad9ac96c2cf0775cafcb7d 163 Pfam PF00011 Hsp20/alpha crystallin family 48 146 7.7E-19 T 11-10-2018 IPR002068 Alpha crystallin/Hsp20 domain syc1814_d 6a3e8a4b29edbd0460cf13a405bdae97 361 SUPERFAMILY SSF53756 107 356 2.04E-16 T 11-10-2018 syc0008_d 029cfba4a21b3f391ed2a83ced8cb420 418 Gene3D G3DSA:3.30.70.270 4 155 2.6E-45 T 11-10-2018 syc0008_d 029cfba4a21b3f391ed2a83ced8cb420 418 Gene3D G3DSA:3.30.1490.100 237 349 1.3E-6 T 11-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 syc0008_d 029cfba4a21b3f391ed2a83ced8cb420 418 Gene3D G3DSA:2.30.40.20 10 73 2.6E-45 T 11-10-2018 syc0008_d 029cfba4a21b3f391ed2a83ced8cb420 418 Pfam PF00817 impB/mucB/samB family 5 148 2.9E-35 T 11-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 syc0008_d 029cfba4a21b3f391ed2a83ced8cb420 418 SUPERFAMILY SSF100879 237 336 2.28E-5 T 11-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 syc0008_d 029cfba4a21b3f391ed2a83ced8cb420 418 Gene3D G3DSA:1.10.150.20 161 217 4.8E-8 T 11-10-2018 syc0008_d 029cfba4a21b3f391ed2a83ced8cb420 418 SUPERFAMILY SSF56672 1 231 2.05E-73 T 11-10-2018 syc0008_d 029cfba4a21b3f391ed2a83ced8cb420 418 Pfam PF11799 impB/mucB/samB family C-terminal domain 236 344 7.5E-11 T 11-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 syc0008_d 029cfba4a21b3f391ed2a83ced8cb420 418 Pfam PF13438 Domain of unknown function (DUF4113) 362 411 1.9E-22 T 11-10-2018 IPR025188 Domain of unknown function DUF4113 syc2112_c dd4d3114204588f2f68e0a32b4584d55 308 ProSitePatterns PS01045 Squalene and phytoene synthases signature 2. 180 205 - T 11-10-2018 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 syc2112_c dd4d3114204588f2f68e0a32b4584d55 308 Gene3D G3DSA:1.10.600.10 8 298 2.4E-107 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily syc2112_c dd4d3114204588f2f68e0a32b4584d55 308 Pfam PF00494 Squalene/phytoene synthase 29 293 1.6E-76 T 11-10-2018 syc2112_c dd4d3114204588f2f68e0a32b4584d55 308 SUPERFAMILY SSF48576 19 306 6.55E-91 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily syc2112_c dd4d3114204588f2f68e0a32b4584d55 308 ProSitePatterns PS01044 Squalene and phytoene synthases signature 1. 138 153 - T 11-10-2018 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 syc2018_c 304b86fae013e9c84316be8db8cc85a3 83 Pfam PF01206 Sulfurtransferase TusA 7 59 5.2E-15 T 11-10-2018 IPR001455 TusA-like domain syc2018_c 304b86fae013e9c84316be8db8cc85a3 83 SUPERFAMILY SSF64307 2 75 2.09E-17 T 11-10-2018 IPR036868 TusA-like domain superfamily syc2018_c 304b86fae013e9c84316be8db8cc85a3 83 Gene3D G3DSA:3.30.110.40 3 77 5.9E-17 T 11-10-2018 IPR036868 TusA-like domain superfamily syc0595_d 7c0736a7d1b1c26326ef8443db478393 355 Pfam PF00005 ABC transporter 23 164 5.8E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 syc0595_d 7c0736a7d1b1c26326ef8443db478393 355 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 syc0595_d 7c0736a7d1b1c26326ef8443db478393 355 Gene3D G3DSA:3.40.50.300 5 224 1.3E-62 T 11-10-2018 syc0595_d 7c0736a7d1b1c26326ef8443db478393 355 SUPERFAMILY SSF50331 239 355 2.31E-15 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal syc0595_d 7c0736a7d1b1c26326ef8443db478393 355 Pfam PF08402 TOBE domain 276 346 1.4E-4 T 11-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 syc0595_d 7c0736a7d1b1c26326ef8443db478393 355 Gene3D G3DSA:2.40.50.940 225 347 4.5E-19 T 11-10-2018 syc0595_d 7c0736a7d1b1c26326ef8443db478393 355 Gene3D G3DSA:2.40.50.140 282 339 4.5E-19 T 11-10-2018 syc0595_d 7c0736a7d1b1c26326ef8443db478393 355 SMART SM00382 31 213 2.4E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain syc0595_d 7c0736a7d1b1c26326ef8443db478393 355 SUPERFAMILY SSF52540 6 245 6.12E-79 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0592_d be5ac3cf409afb69450ba649b13ed08c 438 Pfam PF01547 Bacterial extracellular solute-binding protein 57 345 2.3E-36 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein syc0592_d be5ac3cf409afb69450ba649b13ed08c 438 Gene3D G3DSA:3.40.190.10 160 422 4.7E-93 T 11-10-2018 syc0592_d be5ac3cf409afb69450ba649b13ed08c 438 Gene3D G3DSA:3.40.190.10 64 383 4.7E-93 T 11-10-2018 syc0592_d be5ac3cf409afb69450ba649b13ed08c 438 SUPERFAMILY SSF53850 53 408 3.11E-82 T 11-10-2018 syc2429_c 5f3db1630e5fb317ac99fc5f69f708c8 215 SUPERFAMILY SSF55469 8 211 2.22E-51 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 syc2429_c 5f3db1630e5fb317ac99fc5f69f708c8 215 Pfam PF00881 Nitroreductase family 13 191 6.4E-19 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 syc2429_c 5f3db1630e5fb317ac99fc5f69f708c8 215 Gene3D G3DSA:3.40.109.10 6 213 1.2E-49 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 syc0544_d 7320e2eea4e2721533bd854104845b76 597 Gene3D G3DSA:3.40.1160.10 1 261 1.6E-90 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily syc0544_d 7320e2eea4e2721533bd854104845b76 597 Gene3D G3DSA:3.30.2130.10 262 424 4.6E-53 T 11-10-2018 syc0544_d 7320e2eea4e2721533bd854104845b76 597 Gene3D G3DSA:3.30.2130.10 425 595 1.1E-53 T 11-10-2018 syc0544_d 7320e2eea4e2721533bd854104845b76 597 SUPERFAMILY SSF55021 432 511 7.16E-15 T 11-10-2018 syc0544_d 7320e2eea4e2721533bd854104845b76 597 SUPERFAMILY SSF55021 263 333 2.4E-16 T 11-10-2018 syc0544_d 7320e2eea4e2721533bd854104845b76 597 SUPERFAMILY SSF53633 4 246 4.97E-71 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily syc0544_d 7320e2eea4e2721533bd854104845b76 597 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 11-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 syc0544_d 7320e2eea4e2721533bd854104845b76 597 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 1 414 1.7E-127 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 syc0544_d 7320e2eea4e2721533bd854104845b76 597 Pfam PF01842 ACT domain 449 488 4.9E-9 T 11-10-2018 IPR002912 ACT domain syc0544_d 7320e2eea4e2721533bd854104845b76 597 Pfam PF01842 ACT domain 279 333 1.8E-10 T 11-10-2018 IPR002912 ACT domain syc0544_d 7320e2eea4e2721533bd854104845b76 597 SUPERFAMILY SSF55021 516 588 4.8E-23 T 11-10-2018 syc0544_d 7320e2eea4e2721533bd854104845b76 597 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 63 413 3.9E-114 T 11-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 syc0544_d 7320e2eea4e2721533bd854104845b76 597 Pfam PF00696 Amino acid kinase family 3 235 7.1E-54 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 syc0544_d 7320e2eea4e2721533bd854104845b76 597 SUPERFAMILY SSF55021 348 415 7.13E-21 T 11-10-2018 syc0544_d 7320e2eea4e2721533bd854104845b76 597 Pfam PF13840 ACT domain 347 410 1.4E-12 T 11-10-2018 IPR027795 CASTOR, ACT domain syc0544_d 7320e2eea4e2721533bd854104845b76 597 Pfam PF13840 ACT domain 520 582 6.5E-14 T 11-10-2018 IPR027795 CASTOR, ACT domain syc2373_d 9748a746ab5b4c3c7c6d76365d7cc5ce 436 Gene3D G3DSA:3.30.465.40 34 233 3.0E-41 T 11-10-2018 syc2373_d 9748a746ab5b4c3c7c6d76365d7cc5ce 436 SUPERFAMILY SSF55103 230 432 8.37E-16 T 11-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 syc2373_d 9748a746ab5b4c3c7c6d76365d7cc5ce 436 Pfam PF01565 FAD binding domain 51 178 2.1E-24 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 syc2373_d 9748a746ab5b4c3c7c6d76365d7cc5ce 436 SUPERFAMILY SSF56176 49 219 1.07E-34 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 syc2443_c 8e88490b0d480cc7f00373eaf58c2aef 506 SMART SM00267 329 500 1.4E-58 T 11-10-2018 IPR000160 GGDEF domain syc2443_c 8e88490b0d480cc7f00373eaf58c2aef 506 SMART SM00065 26 168 1.0E-11 T 11-10-2018 IPR003018 GAF domain GO:0005515 syc2443_c 8e88490b0d480cc7f00373eaf58c2aef 506 SMART SM00065 189 330 6.8E-14 T 11-10-2018 IPR003018 GAF domain GO:0005515 syc2443_c 8e88490b0d480cc7f00373eaf58c2aef 506 Gene3D G3DSA:3.30.70.270 329 498 1.7E-48 T 11-10-2018 syc2443_c 8e88490b0d480cc7f00373eaf58c2aef 506 SUPERFAMILY SSF55073 345 497 1.26E-39 T 11-10-2018 IPR029787 Nucleotide cyclase syc2443_c 8e88490b0d480cc7f00373eaf58c2aef 506 Pfam PF01590 GAF domain 189 320 4.7E-10 T 11-10-2018 IPR003018 GAF domain GO:0005515 syc2443_c 8e88490b0d480cc7f00373eaf58c2aef 506 Pfam PF01590 GAF domain 29 156 3.4E-10 T 11-10-2018 IPR003018 GAF domain GO:0005515 syc2443_c 8e88490b0d480cc7f00373eaf58c2aef 506 Gene3D G3DSA:3.30.450.40 174 328 2.7E-22 T 11-10-2018 IPR029016 GAF-like domain superfamily syc2443_c 8e88490b0d480cc7f00373eaf58c2aef 506 SUPERFAMILY SSF55781 190 325 5.23E-21 T 11-10-2018 syc2443_c 8e88490b0d480cc7f00373eaf58c2aef 506 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 336 497 7.7E-44 T 11-10-2018 IPR000160 GGDEF domain syc2443_c 8e88490b0d480cc7f00373eaf58c2aef 506 SUPERFAMILY SSF55781 28 168 7.85E-29 T 11-10-2018 syc2443_c 8e88490b0d480cc7f00373eaf58c2aef 506 Gene3D G3DSA:3.30.450.40 10 171 3.7E-20 T 11-10-2018 IPR029016 GAF-like domain superfamily syc2443_c 8e88490b0d480cc7f00373eaf58c2aef 506 Pfam PF00990 Diguanylate cyclase, GGDEF domain 340 495 1.9E-42 T 11-10-2018 IPR000160 GGDEF domain syc1155_d 00bb92fc5e19e3b8f053c196811f1d40 213 Gene3D G3DSA:3.40.50.150 5 212 7.5E-59 T 11-10-2018 syc1155_d 00bb92fc5e19e3b8f053c196811f1d40 213 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 22 209 5.8E-48 T 11-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 syc1155_d 00bb92fc5e19e3b8f053c196811f1d40 213 SUPERFAMILY SSF53335 33 203 3.57E-22 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase syc1155_d 00bb92fc5e19e3b8f053c196811f1d40 213 Pfam PF02390 Putative methyltransferase 34 205 7.2E-55 T 11-10-2018 syc1155_d 00bb92fc5e19e3b8f053c196811f1d40 213 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 6 210 22.132 T 11-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 syc0491_c af1d5660f7e1a87b24edb6be4f71c448 343 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 149 339 2.5E-67 T 11-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 syc0491_c af1d5660f7e1a87b24edb6be4f71c448 343 SUPERFAMILY SSF51391 141 342 4.97E-71 T 11-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 syc0491_c af1d5660f7e1a87b24edb6be4f71c448 343 PIRSF PIRSF000512 4 343 8.0E-164 T 11-10-2018 IPR016229 Thiamine-phosphate synthase, cyanobacterial/bacterial GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 syc0491_c af1d5660f7e1a87b24edb6be4f71c448 343 Gene3D G3DSA:3.20.20.70 140 343 3.9E-74 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 syc0491_c af1d5660f7e1a87b24edb6be4f71c448 343 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 148 343 27.658 T 11-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 syc0491_c af1d5660f7e1a87b24edb6be4f71c448 343 Hamap MF_01327 Thiamine-phosphate synthase [thiE]. 8 343 43.21 T 11-10-2018 IPR016229 Thiamine-phosphate synthase, cyanobacterial/bacterial GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 syc0491_c af1d5660f7e1a87b24edb6be4f71c448 343 Pfam PF02581 Thiamine monophosphate synthase 150 326 4.2E-64 T 11-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 syc2406_c 883470c933aae51b6282f8e9a8e92a5d 206 SUPERFAMILY SSF46785 122 200 2.72E-12 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily syc2406_c 883470c933aae51b6282f8e9a8e92a5d 206 ProSitePatterns PS00042 Crp-type HTH domain signature. 154 177 - T 11-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 syc2406_c 883470c933aae51b6282f8e9a8e92a5d 206 Pfam PF13545 Crp-like helix-turn-helix domain 125 198 1.1E-12 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 syc2406_c 883470c933aae51b6282f8e9a8e92a5d 206 SMART SM00419 146 194 1.3E-12 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 syc2406_c 883470c933aae51b6282f8e9a8e92a5d 206 SUPERFAMILY SSF51206 36 127 1.18E-6 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like syc2406_c 883470c933aae51b6282f8e9a8e92a5d 206 Gene3D G3DSA:1.10.10.10 107 200 1.0E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily syc0564_d 05d4d63633fc26bf08bcbb64fe9e8ce8 239 Pfam PF01810 LysE type translocator 47 232 5.6E-22 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 syc1499_d 82ca3798a8ed1415c03688c8496a227a 254 Gene3D G3DSA:3.40.50.1400 22 139 1.5E-23 T 11-10-2018 syc1499_d 82ca3798a8ed1415c03688c8496a227a 254 Gene3D G3DSA:3.40.50.1400 140 238 5.2E-8 T 11-10-2018 syc1499_d 82ca3798a8ed1415c03688c8496a227a 254 SUPERFAMILY SSF53800 23 236 6.35E-20 T 11-10-2018 syc1499_d 82ca3798a8ed1415c03688c8496a227a 254 Pfam PF01903 CbiX 27 133 8.8E-13 T 11-10-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 syc1760_d 33ec814414c4032ee11e76f2324748db 38 TIGRFAM TIGR03052 PS_I_psaI: photosystem I reaction center subunit VIII 8 37 5.6E-14 T 11-10-2018 IPR001302 Photosystem I reaction centre subunit VIII GO:0009522|GO:0015979 syc1760_d 33ec814414c4032ee11e76f2324748db 38 Pfam PF00796 Photosystem I reaction centre subunit VIII 10 34 2.3E-12 T 11-10-2018 IPR001302 Photosystem I reaction centre subunit VIII GO:0009522|GO:0015979 syc1760_d 33ec814414c4032ee11e76f2324748db 38 SUPERFAMILY SSF81540 1 37 2.88E-13 T 11-10-2018 IPR036357 Photosystem I reaction centre subunit VIII superfamily GO:0009522|GO:0015979 syc1223_c a8e0514905934124bab37de791eb7cef 948 PRINTS PR00906 SecA protein signature 121 131 1.3E-71 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 syc1223_c a8e0514905934124bab37de791eb7cef 948 PRINTS PR00906 SecA protein signature 408 421 1.3E-71 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 syc1223_c a8e0514905934124bab37de791eb7cef 948 PRINTS PR00906 SecA protein signature 334 356 1.3E-71 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 syc1223_c a8e0514905934124bab37de791eb7cef 948 PRINTS PR00906 SecA protein signature 105 119 1.3E-71 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 syc1223_c a8e0514905934124bab37de791eb7cef 948 PRINTS PR00906 SecA protein signature 174 194 1.3E-71 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 syc1223_c a8e0514905934124bab37de791eb7cef 948 PRINTS PR00906 SecA protein signature 67 91 1.3E-71 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 syc1223_c a8e0514905934124bab37de791eb7cef 948 PRINTS PR00906 SecA protein signature 371 388 1.3E-71 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 syc1223_c a8e0514905934124bab37de791eb7cef 948 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 24 924 0.0 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 syc1223_c a8e0514905934124bab37de791eb7cef 948 SUPERFAMILY SSF52540 413 723 3.92E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc1223_c a8e0514905934124bab37de791eb7cef 948 SMART SM00957 2 397 9.9E-276 T 11-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 syc1223_c a8e0514905934124bab37de791eb7cef 948 SUPERFAMILY SSF81767 231 363 1.11E-41 T 11-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 syc1223_c a8e0514905934124bab37de791eb7cef 948 Gene3D G3DSA:3.40.50.300 18 410 1.1E-174 T 11-10-2018 syc1223_c a8e0514905934124bab37de791eb7cef 948 SUPERFAMILY SSF52540 6 410 1.54E-81 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc1223_c a8e0514905934124bab37de791eb7cef 948 SMART SM00958 232 353 1.4E-65 T 11-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 syc1223_c a8e0514905934124bab37de791eb7cef 948 Pfam PF07516 SecA Wing and Scaffold domain 722 934 1.4E-61 T 11-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 syc1223_c a8e0514905934124bab37de791eb7cef 948 Hamap MF_01382 Protein translocase subunit SecA [secA]. 1 938 19.868 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 syc1223_c a8e0514905934124bab37de791eb7cef 948 ProSitePatterns PS01312 SecA family signature. 497 512 - T 11-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 syc1223_c a8e0514905934124bab37de791eb7cef 948 SUPERFAMILY SSF81886 725 941 1.06E-70 T 11-10-2018 IPR036266 SecA, Wing/Scaffold superfamily syc1223_c a8e0514905934124bab37de791eb7cef 948 Pfam PF01043 SecA preprotein cross-linking domain 238 353 2.7E-33 T 11-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 syc1223_c a8e0514905934124bab37de791eb7cef 948 Gene3D G3DSA:1.10.3060.10 726 937 7.4E-65 T 11-10-2018 syc1223_c a8e0514905934124bab37de791eb7cef 948 Pfam PF07517 SecA DEAD-like domain 5 397 1.3E-126 T 11-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 syc1223_c a8e0514905934124bab37de791eb7cef 948 Gene3D G3DSA:3.90.1440.10 233 363 1.1E-174 T 11-10-2018 syc0045_c 0b1bd8c65836bc077025b34866246d3e 859 Pfam PF00571 CBS domain 502 554 1.3E-12 T 11-10-2018 IPR000644 CBS domain syc0045_c 0b1bd8c65836bc077025b34866246d3e 859 Pfam PF00571 CBS domain 439 487 2.9E-8 T 11-10-2018 IPR000644 CBS domain syc0045_c 0b1bd8c65836bc077025b34866246d3e 859 SUPERFAMILY SSF52402 586 718 9.21E-15 T 11-10-2018 syc0045_c 0b1bd8c65836bc077025b34866246d3e 859 Gene3D G3DSA:3.10.580.10 431 560 5.6E-28 T 11-10-2018 syc0045_c 0b1bd8c65836bc077025b34866246d3e 859 PRINTS PR00762 Chloride channel signature 156 175 3.6E-23 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 syc0045_c 0b1bd8c65836bc077025b34866246d3e 859 PRINTS PR00762 Chloride channel signature 322 342 3.6E-23 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 syc0045_c 0b1bd8c65836bc077025b34866246d3e 859 PRINTS PR00762 Chloride channel signature 362 378 3.6E-23 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 syc0045_c 0b1bd8c65836bc077025b34866246d3e 859 PRINTS PR00762 Chloride channel signature 380 399 3.6E-23 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 syc0045_c 0b1bd8c65836bc077025b34866246d3e 859 PRINTS PR00762 Chloride channel signature 76 93 3.6E-23 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 syc0045_c 0b1bd8c65836bc077025b34866246d3e 859 SMART SM00116 508 555 1.0E-11 T 11-10-2018 IPR000644 CBS domain syc0045_c 0b1bd8c65836bc077025b34866246d3e 859 SMART SM00116 445 492 5.0E-7 T 11-10-2018 IPR000644 CBS domain syc0045_c 0b1bd8c65836bc077025b34866246d3e 859 Pfam PF00654 Voltage gated chloride channel 62 412 1.9E-83 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 syc0045_c 0b1bd8c65836bc077025b34866246d3e 859 Gene3D G3DSA:3.40.50.620 576 717 4.7E-13 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold syc0045_c 0b1bd8c65836bc077025b34866246d3e 859 Pfam PF00582 Universal stress protein family 586 717 1.8E-14 T 11-10-2018 IPR006016 UspA syc0045_c 0b1bd8c65836bc077025b34866246d3e 859 SUPERFAMILY SSF81340 4 418 5.89E-85 T 11-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 syc0045_c 0b1bd8c65836bc077025b34866246d3e 859 Gene3D G3DSA:1.10.3080.10 13 425 5.8E-92 T 11-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 syc0045_c 0b1bd8c65836bc077025b34866246d3e 859 SUPERFAMILY SSF54631 436 553 3.03E-30 T 11-10-2018 syc0609_d 2f31ec00d01cf4d92aab39bd070a15ac 161 Pfam PF09655 Conserved nitrate reductase-associated protein (Nitr_red_assoc) 8 150 2.7E-58 T 11-10-2018 IPR013481 Conserved hypothetical protein CHP02664, nitrate reductase-associated syc0609_d 2f31ec00d01cf4d92aab39bd070a15ac 161 TIGRFAM TIGR02664 nitr_red_assoc: conserved hypothetical protein 8 150 4.3E-53 T 11-10-2018 IPR013481 Conserved hypothetical protein CHP02664, nitrate reductase-associated syc1674_c 434109323385ad7f8b62db2b866f40e4 202 SUPERFAMILY SSF52980 4 182 2.2E-20 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 syc1674_c 434109323385ad7f8b62db2b866f40e4 202 Gene3D G3DSA:3.90.1570.10 4 186 2.0E-16 T 11-10-2018 syc1674_c 434109323385ad7f8b62db2b866f40e4 202 Pfam PF05685 Putative restriction endonuclease 13 173 2.5E-31 T 11-10-2018 IPR008538 Domain of unknown function DUF820 syc0515_c 0e302ee1f9c2a4976d75050c20fe81b2 488 SUPERFAMILY SSF56059 21 468 9.47E-66 T 11-10-2018 syc0515_c 0e302ee1f9c2a4976d75050c20fe81b2 488 Pfam PF14403 Circularly permuted ATP-grasp type 2 78 453 8.9E-164 T 11-10-2018 IPR025841 Circularly permuted ATP-grasp type 2 syc0515_c 0e302ee1f9c2a4976d75050c20fe81b2 488 Gene3D G3DSA:3.30.1490.270 350 409 8.4E-26 T 11-10-2018 syc0515_c 0e302ee1f9c2a4976d75050c20fe81b2 488 Gene3D G3DSA:3.40.50.11290 216 313 4.2E-41 T 11-10-2018 syc0515_c 0e302ee1f9c2a4976d75050c20fe81b2 488 PIRSF PIRSF005522 1 480 2.2E-234 T 11-10-2018 IPR016450 Uncharacterised conserved protein UCP005522 syc2350_d aef910f709851b67bf2cd1d4ef0eba2a 478 Gene3D G3DSA:3.40.50.720 11 105 5.5E-23 T 11-10-2018 syc2350_d aef910f709851b67bf2cd1d4ef0eba2a 478 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 9 473 37.371 T 11-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 syc2350_d aef910f709851b67bf2cd1d4ef0eba2a 478 Pfam PF08245 Mur ligase middle domain 123 297 1.3E-19 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 syc2350_d aef910f709851b67bf2cd1d4ef0eba2a 478 SUPERFAMILY SSF53244 316 469 4.45E-40 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 syc2350_d aef910f709851b67bf2cd1d4ef0eba2a 478 Pfam PF02875 Mur ligase family, glutamate ligase domain 318 409 5.6E-18 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 syc2350_d aef910f709851b67bf2cd1d4ef0eba2a 478 Pfam PF01225 Mur ligase family, catalytic domain 12 116 1.7E-17 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 syc2350_d aef910f709851b67bf2cd1d4ef0eba2a 478 Gene3D G3DSA:3.40.1190.10 107 314 4.6E-61 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 syc2350_d aef910f709851b67bf2cd1d4ef0eba2a 478 SUPERFAMILY SSF51984 10 106 4.45E-20 T 11-10-2018 syc2350_d aef910f709851b67bf2cd1d4ef0eba2a 478 Gene3D G3DSA:3.90.190.20 315 476 5.7E-51 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 syc2350_d aef910f709851b67bf2cd1d4ef0eba2a 478 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 12 467 1.6E-146 T 11-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 syc2350_d aef910f709851b67bf2cd1d4ef0eba2a 478 SUPERFAMILY SSF53623 104 315 8.24E-64 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 syc0426_c 9c56a8ced636dbbf574239ad90fb0f44 71 Pfam PF01084 Ribosomal protein S18 15 64 1.1E-27 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc0426_c 9c56a8ced636dbbf574239ad90fb0f44 71 Gene3D G3DSA:4.10.640.10 8 70 1.1E-29 T 11-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc0426_c 9c56a8ced636dbbf574239ad90fb0f44 71 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 17 69 1.0E-22 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc0426_c 9c56a8ced636dbbf574239ad90fb0f44 71 PRINTS PR00974 Ribosomal protein S18 family signature 42 56 3.0E-22 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc0426_c 9c56a8ced636dbbf574239ad90fb0f44 71 PRINTS PR00974 Ribosomal protein S18 family signature 34 41 3.0E-22 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc0426_c 9c56a8ced636dbbf574239ad90fb0f44 71 PRINTS PR00974 Ribosomal protein S18 family signature 56 66 3.0E-22 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc0426_c 9c56a8ced636dbbf574239ad90fb0f44 71 PRINTS PR00974 Ribosomal protein S18 family signature 24 34 3.0E-22 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc0426_c 9c56a8ced636dbbf574239ad90fb0f44 71 SUPERFAMILY SSF46911 13 69 9.02E-26 T 11-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc0426_c 9c56a8ced636dbbf574239ad90fb0f44 71 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 68 7.1E-30 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc0426_c 9c56a8ced636dbbf574239ad90fb0f44 71 ProSitePatterns PS00057 Ribosomal protein S18 signature. 17 40 - T 11-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc0426_c 9c56a8ced636dbbf574239ad90fb0f44 71 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 1 69 22.251 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc0102_c 9dc702284a413988caa63cc39d1165cf 335 SUPERFAMILY SSF53901 8 331 1.47E-65 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 syc0102_c 9dc702284a413988caa63cc39d1165cf 335 Gene3D G3DSA:3.40.47.10 6 335 4.8E-123 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 syc0102_c 9dc702284a413988caa63cc39d1165cf 335 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 244 331 3.6E-35 T 11-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 syc0102_c 9dc702284a413988caa63cc39d1165cf 335 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 8 331 6.7E-109 T 11-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 syc0102_c 9dc702284a413988caa63cc39d1165cf 335 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 6 331 67.834 T 11-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 syc0102_c 9dc702284a413988caa63cc39d1165cf 335 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 111 188 2.9E-32 T 11-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 syc0864_c dfe9aeac7f602d98471fae4997c0f783 450 PRINTS PR00103 cAMP-dependent protein kinase signature 364 373 8.5E-7 T 11-10-2018 syc0864_c dfe9aeac7f602d98471fae4997c0f783 450 PRINTS PR00103 cAMP-dependent protein kinase signature 337 351 8.5E-7 T 11-10-2018 syc0864_c dfe9aeac7f602d98471fae4997c0f783 450 PRINTS PR00103 cAMP-dependent protein kinase signature 376 387 8.5E-7 T 11-10-2018 syc0864_c dfe9aeac7f602d98471fae4997c0f783 450 PRINTS PR00103 cAMP-dependent protein kinase signature 322 336 8.5E-7 T 11-10-2018 syc0864_c dfe9aeac7f602d98471fae4997c0f783 450 SUPERFAMILY SSF82689 181 279 4.05E-25 T 11-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 syc0864_c dfe9aeac7f602d98471fae4997c0f783 450 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 366 383 - T 11-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site syc0864_c dfe9aeac7f602d98471fae4997c0f783 450 SMART SM00100 301 416 7.5E-28 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain syc0864_c dfe9aeac7f602d98471fae4997c0f783 450 Gene3D G3DSA:2.60.120.10 274 425 1.4E-35 T 11-10-2018 IPR014710 RmlC-like jelly roll fold syc0864_c dfe9aeac7f602d98471fae4997c0f783 450 Gene3D G3DSA:2.30.30.60 128 177 5.7E-15 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily syc0864_c dfe9aeac7f602d98471fae4997c0f783 450 SUPERFAMILY SSF82861 29 111 8.63E-10 T 11-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 syc0864_c dfe9aeac7f602d98471fae4997c0f783 450 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 142 176 - T 11-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 syc0864_c dfe9aeac7f602d98471fae4997c0f783 450 Pfam PF00027 Cyclic nucleotide-binding domain 324 403 3.9E-19 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain syc0864_c dfe9aeac7f602d98471fae4997c0f783 450 SUPERFAMILY SSF51206 294 423 1.57E-33 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like syc0864_c dfe9aeac7f602d98471fae4997c0f783 450 Gene3D G3DSA:3.30.70.100 180 273 1.9E-22 T 11-10-2018 syc0864_c dfe9aeac7f602d98471fae4997c0f783 450 SUPERFAMILY SSF50182 114 178 7.52E-17 T 11-10-2018 IPR010920 LSM domain superfamily syc0864_c dfe9aeac7f602d98471fae4997c0f783 450 Pfam PF00924 Mechanosensitive ion channel 70 269 6.5E-54 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 syc0864_c dfe9aeac7f602d98471fae4997c0f783 450 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 328 344 - T 11-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site syc1125_d 88be1f624dde78381307ea8e548a446d 383 Pfam PF02417 Chromate transporter 209 375 2.7E-41 T 11-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 syc1125_d 88be1f624dde78381307ea8e548a446d 383 Pfam PF02417 Chromate transporter 9 170 5.8E-38 T 11-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 syc1125_d 88be1f624dde78381307ea8e548a446d 383 TIGRFAM TIGR00937 2A51: chromate efflux transporter 14 373 1.8E-94 T 11-10-2018 IPR014047 Chromate transporter, long chain syc1125_d 88be1f624dde78381307ea8e548a446d 383 PIRSF PIRSF004810 1 383 1.5E-121 T 11-10-2018 IPR014047 Chromate transporter, long chain syc1399_d a342972128231c3270454fb386ba474e 574 Pfam PF02540 NAD synthase 288 550 1.2E-77 T 11-10-2018 IPR022310 NAD/GMP synthase syc1399_d a342972128231c3270454fb386ba474e 574 Gene3D G3DSA:3.60.110.10 1 286 2.0E-79 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily syc1399_d a342972128231c3270454fb386ba474e 574 Gene3D G3DSA:3.40.50.620 287 574 2.5E-111 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold syc1399_d a342972128231c3270454fb386ba474e 574 Pfam PF00795 Carbon-nitrogen hydrolase 2 262 1.2E-19 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 syc1399_d a342972128231c3270454fb386ba474e 574 PIRSF PIRSF006630 1 574 1.3E-190 T 11-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 syc1399_d a342972128231c3270454fb386ba474e 574 Hamap MF_02090 Glutamine-dependent NAD(+) synthetase [nadE]. 1 574 29.036 T 11-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 syc1399_d a342972128231c3270454fb386ba474e 574 SUPERFAMILY SSF52402 281 559 3.72E-75 T 11-10-2018 syc1399_d a342972128231c3270454fb386ba474e 574 TIGRFAM TIGR00552 nadE: NAD+ synthetase 285 555 6.4E-67 T 11-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 syc1399_d a342972128231c3270454fb386ba474e 574 SUPERFAMILY SSF56317 1 259 2.09E-54 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily syc0862_c efa92b94b08d3f3a584a4ade438689f5 206 SMART SM00271 5 62 8.9E-11 T 11-10-2018 IPR001623 DnaJ domain syc0862_c efa92b94b08d3f3a584a4ade438689f5 206 Gene3D G3DSA:1.25.40.10 107 206 3.5E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc0862_c efa92b94b08d3f3a584a4ade438689f5 206 SUPERFAMILY SSF48452 123 203 2.98E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc0862_c efa92b94b08d3f3a584a4ade438689f5 206 SUPERFAMILY SSF46565 10 59 2.09E-11 T 11-10-2018 IPR036869 Chaperone J-domain superfamily syc0862_c efa92b94b08d3f3a584a4ade438689f5 206 PRINTS PR00625 DnaJ domain signature 26 41 5.5E-5 T 11-10-2018 IPR001623 DnaJ domain syc0862_c efa92b94b08d3f3a584a4ade438689f5 206 PRINTS PR00625 DnaJ domain signature 8 26 5.5E-5 T 11-10-2018 IPR001623 DnaJ domain syc0862_c efa92b94b08d3f3a584a4ade438689f5 206 PRINTS PR00625 DnaJ domain signature 42 62 5.5E-5 T 11-10-2018 IPR001623 DnaJ domain syc0862_c efa92b94b08d3f3a584a4ade438689f5 206 Pfam PF00226 DnaJ domain 10 60 1.6E-11 T 11-10-2018 IPR001623 DnaJ domain syc0862_c efa92b94b08d3f3a584a4ade438689f5 206 Gene3D G3DSA:1.10.287.110 4 66 7.4E-12 T 11-10-2018 IPR036869 Chaperone J-domain superfamily syc2253_d 96bf3214e61e86691c1ed024b9758cec 455 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 34 448 4.1E-125 T 11-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 syc2253_d 96bf3214e61e86691c1ed024b9758cec 455 SUPERFAMILY SSF53244 313 446 1.25E-29 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 syc2253_d 96bf3214e61e86691c1ed024b9758cec 455 Gene3D G3DSA:3.40.1190.10 91 308 4.6E-60 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 syc2253_d 96bf3214e61e86691c1ed024b9758cec 455 SUPERFAMILY SSF63418 24 106 4.71E-23 T 11-10-2018 IPR035911 MurE/MurF, N-terminal syc2253_d 96bf3214e61e86691c1ed024b9758cec 455 Pfam PF01225 Mur ligase family, catalytic domain 31 104 1.2E-12 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 syc2253_d 96bf3214e61e86691c1ed024b9758cec 455 Pfam PF08245 Mur ligase middle domain 115 294 2.0E-40 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 syc2253_d 96bf3214e61e86691c1ed024b9758cec 455 SUPERFAMILY SSF53623 110 305 6.02E-45 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 syc2253_d 96bf3214e61e86691c1ed024b9758cec 455 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 10 449 32.483 T 11-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 syc2253_d 96bf3214e61e86691c1ed024b9758cec 455 Gene3D G3DSA:3.40.1390.10 15 83 9.5E-21 T 11-10-2018 syc2253_d 96bf3214e61e86691c1ed024b9758cec 455 Pfam PF02875 Mur ligase family, glutamate ligase domain 313 392 1.4E-11 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 syc2253_d 96bf3214e61e86691c1ed024b9758cec 455 Gene3D G3DSA:3.90.190.20 312 451 9.8E-34 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 syc2189_d 765764b2a5794e481d02e059396b044d 246 Pfam PF00639 PPIC-type PPIASE domain 137 211 1.7E-9 T 11-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 syc2189_d 765764b2a5794e481d02e059396b044d 246 SUPERFAMILY SSF54534 116 210 1.77E-18 T 11-10-2018 syc2189_d 765764b2a5794e481d02e059396b044d 246 Gene3D G3DSA:3.10.50.40 132 216 6.1E-12 T 11-10-2018 syc2189_d 765764b2a5794e481d02e059396b044d 246 SUPERFAMILY SSF109998 13 109 1.75E-7 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily syc0755_d 4be9a794712a8217ebdc09a3028bf5b5 598 SMART SM00382 382 567 4.9E-18 T 11-10-2018 IPR003593 AAA+ ATPase domain syc0755_d 4be9a794712a8217ebdc09a3028bf5b5 598 SUPERFAMILY SSF52540 351 591 4.23E-85 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0755_d 4be9a794712a8217ebdc09a3028bf5b5 598 Gene3D G3DSA:1.20.1560.10 6 340 7.9E-84 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 syc0755_d 4be9a794712a8217ebdc09a3028bf5b5 598 Pfam PF00664 ABC transporter transmembrane region 31 307 1.2E-47 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 syc0755_d 4be9a794712a8217ebdc09a3028bf5b5 598 Pfam PF00005 ABC transporter 374 521 5.9E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 syc0755_d 4be9a794712a8217ebdc09a3028bf5b5 598 ProSitePatterns PS00211 ABC transporters family signature. 493 507 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 syc0755_d 4be9a794712a8217ebdc09a3028bf5b5 598 SUPERFAMILY SSF90123 16 337 1.44E-75 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 syc0755_d 4be9a794712a8217ebdc09a3028bf5b5 598 Gene3D G3DSA:3.40.50.300 348 596 3.3E-89 T 11-10-2018 syc1650_d 40c6bf25bf4f9f9ae580b0560a632bed 171 SUPERFAMILY SSF53271 2 162 5.53E-49 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like syc1650_d 40c6bf25bf4f9f9ae580b0560a632bed 171 Gene3D G3DSA:3.40.50.2020 1 171 3.7E-61 T 11-10-2018 syc1650_d 40c6bf25bf4f9f9ae580b0560a632bed 171 Pfam PF00156 Phosphoribosyl transferase domain 45 148 2.5E-12 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 syc1650_d 40c6bf25bf4f9f9ae580b0560a632bed 171 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 3 170 9.8E-68 T 11-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 syc1650_d 40c6bf25bf4f9f9ae580b0560a632bed 171 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 3 170 37.645 T 11-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 syc1210_d 4ce2cc667334cfa303c936fe594e715a 538 SUPERFAMILY SSF56024 298 513 3.81E-31 T 11-10-2018 syc1210_d 4ce2cc667334cfa303c936fe594e715a 538 SUPERFAMILY SSF56024 102 314 6.59E-24 T 11-10-2018 syc1210_d 4ce2cc667334cfa303c936fe594e715a 538 Gene3D G3DSA:3.30.870.10 323 503 1.2E-33 T 11-10-2018 syc1210_d 4ce2cc667334cfa303c936fe594e715a 538 Pfam PF13091 PLD-like domain 357 498 3.9E-24 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 syc1210_d 4ce2cc667334cfa303c936fe594e715a 538 Pfam PF13091 PLD-like domain 129 303 1.5E-19 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 syc1210_d 4ce2cc667334cfa303c936fe594e715a 538 SMART SM00155 444 471 0.049 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 syc1210_d 4ce2cc667334cfa303c936fe594e715a 538 SMART SM00155 239 266 7.6E-5 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 syc1210_d 4ce2cc667334cfa303c936fe594e715a 538 ProSitePatterns PS00018 EF-hand calcium-binding domain. 201 213 - T 11-10-2018 IPR018247 EF-Hand 1, calcium-binding site syc0618_d fa993af2645572e54c722b78552790d3 628 SMART SM00304 177 229 1.8E-14 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 syc0618_d fa993af2645572e54c722b78552790d3 628 SUPERFAMILY SSF55785 232 352 1.92E-15 T 11-10-2018 IPR035965 PAS domain superfamily syc0618_d fa993af2645572e54c722b78552790d3 628 SMART SM00091 240 306 2.2E-6 T 11-10-2018 IPR000014 PAS domain syc0618_d fa993af2645572e54c722b78552790d3 628 Gene3D G3DSA:1.20.1480.50 140 231 4.6E-10 T 11-10-2018 syc0618_d fa993af2645572e54c722b78552790d3 628 Pfam PF08448 PAS fold 249 355 4.5E-10 T 11-10-2018 IPR013656 PAS fold-4 syc0618_d fa993af2645572e54c722b78552790d3 628 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 477 598 5.3E-23 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase syc0618_d fa993af2645572e54c722b78552790d3 628 Gene3D G3DSA:1.10.287.130 349 429 6.5E-23 T 11-10-2018 syc0618_d fa993af2645572e54c722b78552790d3 628 Gene3D G3DSA:3.30.450.20 232 348 2.0E-14 T 11-10-2018 syc0618_d fa993af2645572e54c722b78552790d3 628 PRINTS PR00344 Bacterial sensor protein C-terminal signature 527 541 2.0E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 syc0618_d fa993af2645572e54c722b78552790d3 628 PRINTS PR00344 Bacterial sensor protein C-terminal signature 561 579 2.0E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 syc0618_d fa993af2645572e54c722b78552790d3 628 PRINTS PR00344 Bacterial sensor protein C-terminal signature 545 555 2.0E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 syc0618_d fa993af2645572e54c722b78552790d3 628 PRINTS PR00344 Bacterial sensor protein C-terminal signature 585 598 2.0E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 syc0618_d fa993af2645572e54c722b78552790d3 628 Pfam PF00672 HAMP domain 179 225 2.7E-12 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 syc0618_d fa993af2645572e54c722b78552790d3 628 SMART SM00388 360 428 1.1E-22 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 syc0618_d fa993af2645572e54c722b78552790d3 628 SUPERFAMILY SSF55874 417 603 4.71E-41 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily syc0618_d fa993af2645572e54c722b78552790d3 628 Gene3D G3DSA:3.30.565.10 430 603 5.5E-44 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily syc0618_d fa993af2645572e54c722b78552790d3 628 SUPERFAMILY SSF47384 347 428 1.45E-20 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 syc0618_d fa993af2645572e54c722b78552790d3 628 SMART SM00387 473 601 5.7E-35 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase syc0618_d fa993af2645572e54c722b78552790d3 628 Pfam PF00512 His Kinase A (phospho-acceptor) domain 360 427 8.0E-18 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 syc0618_d fa993af2645572e54c722b78552790d3 628 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 238 360 1.1E-10 T 11-10-2018 IPR000014 PAS domain syc0618_d fa993af2645572e54c722b78552790d3 628 SUPERFAMILY SSF158472 178 226 6.8E-10 T 11-10-2018 syc1473_d 4f12cdba9d08b692c424b3768c6e152e 396 Pfam PF14234 Domain of unknown function (DUF4336) 34 352 1.4E-134 T 11-10-2018 IPR025638 Protein of unknown function DUF4336 syc0828_c 536a7a2e888a4a0dffc72a8028bfe36a 262 PIRSF PIRSF006779 1 258 6.2E-76 T 11-10-2018 IPR002747 SAM-dependent chlorinase/fluorinase syc0828_c 536a7a2e888a4a0dffc72a8028bfe36a 262 Pfam PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase 5 254 1.7E-81 T 11-10-2018 IPR002747 SAM-dependent chlorinase/fluorinase syc0828_c 536a7a2e888a4a0dffc72a8028bfe36a 262 SUPERFAMILY SSF101852 167 257 3.27E-22 T 11-10-2018 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal syc0828_c 536a7a2e888a4a0dffc72a8028bfe36a 262 Gene3D G3DSA:3.40.50.10790 89 164 3.7E-24 T 11-10-2018 IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal syc0828_c 536a7a2e888a4a0dffc72a8028bfe36a 262 Gene3D G3DSA:3.40.50.10790 1 88 5.0E-35 T 11-10-2018 IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal syc0828_c 536a7a2e888a4a0dffc72a8028bfe36a 262 Gene3D G3DSA:2.40.30.90 167 257 1.2E-24 T 11-10-2018 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal syc0828_c 536a7a2e888a4a0dffc72a8028bfe36a 262 SUPERFAMILY SSF102522 3 161 1.7E-59 T 11-10-2018 IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal syc1787_c 5319d74babeaa03a76ebc1a2bff32f56 484 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 13 85 8.6E-22 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 syc1787_c 5319d74babeaa03a76ebc1a2bff32f56 484 Gene3D G3DSA:3.40.50.300 88 364 3.7E-120 T 11-10-2018 syc1787_c 5319d74babeaa03a76ebc1a2bff32f56 484 Hamap MF_01347 ATP synthase subunit beta [atpB]. 8 480 57.357 T 11-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 syc1787_c 5319d74babeaa03a76ebc1a2bff32f56 484 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 10 480 1.2E-251 T 11-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 syc1787_c 5319d74babeaa03a76ebc1a2bff32f56 484 SUPERFAMILY SSF52540 89 367 7.17E-90 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc1787_c 5319d74babeaa03a76ebc1a2bff32f56 484 Gene3D G3DSA:2.40.10.170 9 87 1.1E-32 T 11-10-2018 syc1787_c 5319d74babeaa03a76ebc1a2bff32f56 484 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 142 362 1.5E-64 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 syc1787_c 5319d74babeaa03a76ebc1a2bff32f56 484 SMART SM00382 154 346 2.0E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain syc1787_c 5319d74babeaa03a76ebc1a2bff32f56 484 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 353 362 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 syc1787_c 5319d74babeaa03a76ebc1a2bff32f56 484 Gene3D G3DSA:1.10.1140.10 365 484 5.4E-58 T 11-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 syc1787_c 5319d74babeaa03a76ebc1a2bff32f56 484 SUPERFAMILY SSF50615 9 87 3.92E-28 T 11-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 syc1787_c 5319d74babeaa03a76ebc1a2bff32f56 484 SUPERFAMILY SSF47917 365 480 4.97E-52 T 11-10-2018 syc0185_d 8da08a1450267473935aa6cc9e3e93f4 440 SUPERFAMILY SSF143865 94 354 3.01E-64 T 11-10-2018 syc0185_d 8da08a1450267473935aa6cc9e3e93f4 440 Pfam PF01544 CorA-like Mg2+ transporter protein 128 421 3.0E-66 T 11-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 syc0185_d 8da08a1450267473935aa6cc9e3e93f4 440 Gene3D G3DSA:1.20.58.340 230 341 5.0E-33 T 11-10-2018 syc0185_d 8da08a1450267473935aa6cc9e3e93f4 440 Gene3D G3DSA:1.20.58.340 343 426 1.6E-30 T 11-10-2018 syc0185_d 8da08a1450267473935aa6cc9e3e93f4 440 SUPERFAMILY SSF144083 355 423 6.02E-20 T 11-10-2018 syc0185_d 8da08a1450267473935aa6cc9e3e93f4 440 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 102 426 4.1E-87 T 11-10-2018 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 syc0185_d 8da08a1450267473935aa6cc9e3e93f4 440 Gene3D G3DSA:3.30.460.20 68 229 6.5E-24 T 11-10-2018 syc1454_c b4c73fea1866da901ee1519b1b58fef0 451 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 358 399 7.3E-5 T 11-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 syc1454_c b4c73fea1866da901ee1519b1b58fef0 451 SUPERFAMILY SSF53756 186 430 1.91E-21 T 11-10-2018 syc1454_c b4c73fea1866da901ee1519b1b58fef0 451 SUPERFAMILY SSF48452 4 157 5.37E-23 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc1454_c b4c73fea1866da901ee1519b1b58fef0 451 Gene3D G3DSA:3.40.50.2000 294 444 5.5E-9 T 11-10-2018 syc1454_c b4c73fea1866da901ee1519b1b58fef0 451 Pfam PF13429 Tetratricopeptide repeat 3 120 2.0E-6 T 11-10-2018 syc1454_c b4c73fea1866da901ee1519b1b58fef0 451 SMART SM00028 34 67 0.9 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc1454_c b4c73fea1866da901ee1519b1b58fef0 451 SMART SM00028 99 132 2.0E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc1454_c b4c73fea1866da901ee1519b1b58fef0 451 Gene3D G3DSA:1.25.40.10 4 168 1.2E-26 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc2107_d 8a0b64ef61f9efdb2b19223691ebb65a 303 SUPERFAMILY SSF160240 216 288 5.89E-16 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 syc2107_d 8a0b64ef61f9efdb2b19223691ebb65a 303 Gene3D G3DSA:1.20.1510.10 9 207 5.1E-54 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily syc2107_d 8a0b64ef61f9efdb2b19223691ebb65a 303 Gene3D G3DSA:3.30.70.1350 212 288 1.4E-14 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 syc2107_d 8a0b64ef61f9efdb2b19223691ebb65a 303 Pfam PF16916 Dimerisation domain of Zinc Transporter 216 286 2.3E-17 T 11-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain syc2107_d 8a0b64ef61f9efdb2b19223691ebb65a 303 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 12 287 2.5E-66 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 syc2107_d 8a0b64ef61f9efdb2b19223691ebb65a 303 Pfam PF01545 Cation efflux family 13 206 2.0E-44 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 syc2107_d 8a0b64ef61f9efdb2b19223691ebb65a 303 SUPERFAMILY SSF161111 6 209 1.57E-53 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily syc2031_d f2faf315570087ba7fa18fd9213779d4 411 TIGRFAM TIGR01790 carotene-cycl: lycopene cyclase family protein 3 393 1.5E-162 T 11-10-2018 IPR010108 Lycopene cyclase, beta/epsilon GO:0016117|GO:0016705 syc2031_d f2faf315570087ba7fa18fd9213779d4 411 Pfam PF05834 Lycopene cyclase protein 3 390 7.7E-84 T 11-10-2018 syc2031_d f2faf315570087ba7fa18fd9213779d4 411 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 3 25 9.2E-5 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 syc2031_d f2faf315570087ba7fa18fd9213779d4 411 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 262 281 9.2E-5 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 syc2031_d f2faf315570087ba7fa18fd9213779d4 411 SUPERFAMILY SSF51905 2 382 2.04E-29 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc2031_d f2faf315570087ba7fa18fd9213779d4 411 Gene3D G3DSA:3.50.50.60 1 390 1.1E-13 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc1553_d a415d3688678580ac935b830087834a0 249 SMART SM00929 96 136 6.8E-17 T 11-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc1553_d a415d3688678580ac935b830087834a0 249 SUPERFAMILY SSF54292 15 87 9.41E-18 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 syc1553_d a415d3688678580ac935b830087834a0 249 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 203 214 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site syc1553_d a415d3688678580ac935b830087834a0 249 Gene3D G3DSA:3.10.20.740 14 136 2.7E-37 T 11-10-2018 syc1553_d a415d3688678580ac935b830087834a0 249 PIRSF PIRSF000309 12 247 1.3E-109 T 11-10-2018 IPR016214 NAD-reducing hydrogenase, HoxS gamma subunit MetaCyc: PWY-5382|MetaCyc: PWY-6758 syc1553_d a415d3688678580ac935b830087834a0 249 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 14 89 1.0E-16 T 11-10-2018 syc1553_d a415d3688678580ac935b830087834a0 249 Gene3D G3DSA:3.30.70.20 140 221 2.0E-21 T 11-10-2018 syc1553_d a415d3688678580ac935b830087834a0 249 SUPERFAMILY SSF54862 89 222 8.79E-36 T 11-10-2018 syc1553_d a415d3688678580ac935b830087834a0 249 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 96 135 3.7E-14 T 11-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc1553_d a415d3688678580ac935b830087834a0 249 Pfam PF00037 4Fe-4S binding domain 201 218 1.9E-6 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain syc1636_c c93ff5dd78de9795ee4f7bc13f4603c7 634 Gene3D G3DSA:3.30.420.40 5 372 2.9E-152 T 11-10-2018 syc1636_c c93ff5dd78de9795ee4f7bc13f4603c7 634 SUPERFAMILY SSF100920 378 534 1.1E-61 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 syc1636_c c93ff5dd78de9795ee4f7bc13f4603c7 634 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 syc1636_c c93ff5dd78de9795ee4f7bc13f4603c7 634 Gene3D G3DSA:2.60.34.10 373 499 2.8E-58 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 syc1636_c c93ff5dd78de9795ee4f7bc13f4603c7 634 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 597 8.2E-300 T 11-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 syc1636_c c93ff5dd78de9795ee4f7bc13f4603c7 634 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 190 203 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 syc1636_c c93ff5dd78de9795ee4f7bc13f4603c7 634 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 633 38.061 T 11-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 syc1636_c c93ff5dd78de9795ee4f7bc13f4603c7 634 SUPERFAMILY SSF53067 2 182 1.11E-59 T 11-10-2018 syc1636_c c93ff5dd78de9795ee4f7bc13f4603c7 634 SUPERFAMILY SSF100934 528 600 1.8E-6 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 syc1636_c c93ff5dd78de9795ee4f7bc13f4603c7 634 Gene3D G3DSA:1.20.1270.10 501 601 1.7E-30 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 syc1636_c c93ff5dd78de9795ee4f7bc13f4603c7 634 PRINTS PR00301 70kDa heat shock protein signature 328 344 5.0E-79 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 syc1636_c c93ff5dd78de9795ee4f7bc13f4603c7 634 PRINTS PR00301 70kDa heat shock protein signature 196 206 5.0E-79 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 syc1636_c c93ff5dd78de9795ee4f7bc13f4603c7 634 PRINTS PR00301 70kDa heat shock protein signature 359 379 5.0E-79 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 syc1636_c c93ff5dd78de9795ee4f7bc13f4603c7 634 PRINTS PR00301 70kDa heat shock protein signature 54 62 5.0E-79 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 syc1636_c c93ff5dd78de9795ee4f7bc13f4603c7 634 PRINTS PR00301 70kDa heat shock protein signature 137 157 5.0E-79 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 syc1636_c c93ff5dd78de9795ee4f7bc13f4603c7 634 PRINTS PR00301 70kDa heat shock protein signature 463 479 5.0E-79 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 syc1636_c c93ff5dd78de9795ee4f7bc13f4603c7 634 PRINTS PR00301 70kDa heat shock protein signature 3 16 5.0E-79 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 syc1636_c c93ff5dd78de9795ee4f7bc13f4603c7 634 PRINTS PR00301 70kDa heat shock protein signature 31 43 5.0E-79 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 syc1636_c c93ff5dd78de9795ee4f7bc13f4603c7 634 PRINTS PR00301 70kDa heat shock protein signature 382 401 5.0E-79 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 syc1636_c c93ff5dd78de9795ee4f7bc13f4603c7 634 Gene3D G3DSA:3.90.640.10 223 310 2.9E-152 T 11-10-2018 syc1636_c c93ff5dd78de9795ee4f7bc13f4603c7 634 SUPERFAMILY SSF53067 185 376 2.65E-68 T 11-10-2018 syc1636_c c93ff5dd78de9795ee4f7bc13f4603c7 634 Pfam PF00012 Hsp70 protein 4 598 5.7E-265 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 syc1636_c c93ff5dd78de9795ee4f7bc13f4603c7 634 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 331 345 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 syc1636_c c93ff5dd78de9795ee4f7bc13f4603c7 634 Gene3D G3DSA:3.30.420.40 179 360 2.9E-152 T 11-10-2018 syc2426_d a44932aad1b046a031ccb4551622a6db 478 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 62 71 2.8E-30 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 syc2426_d a44932aad1b046a031ccb4551622a6db 478 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 226 247 2.8E-30 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 syc2426_d a44932aad1b046a031ccb4551622a6db 478 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 195 213 2.8E-30 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 syc2426_d a44932aad1b046a031ccb4551622a6db 478 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 26 37 2.8E-30 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 syc2426_d a44932aad1b046a031ccb4551622a6db 478 SUPERFAMILY SSF52374 4 319 8.31E-99 T 11-10-2018 syc2426_d a44932aad1b046a031ccb4551622a6db 478 SUPERFAMILY SSF47323 340 475 4.32E-30 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 syc2426_d a44932aad1b046a031ccb4551622a6db 478 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 3 477 38.011 T 11-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 syc2426_d a44932aad1b046a031ccb4551622a6db 478 SMART SM00840 354 421 3.6E-22 T 11-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 syc2426_d a44932aad1b046a031ccb4551622a6db 478 Gene3D G3DSA:1.20.120.640 312 478 1.6E-31 T 11-10-2018 syc2426_d a44932aad1b046a031ccb4551622a6db 478 Pfam PF09190 DALR domain 354 419 5.2E-18 T 11-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 syc2426_d a44932aad1b046a031ccb4551622a6db 478 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 16 319 2.9E-127 T 11-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 syc2426_d a44932aad1b046a031ccb4551622a6db 478 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 3 477 2.2E-171 T 11-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 syc2426_d a44932aad1b046a031ccb4551622a6db 478 Gene3D G3DSA:3.40.50.620 1 311 1.2E-136 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold syc1450_d 3c2ca311c56d4e244f58b4fabf8f8166 144 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 25 45 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site syc1450_d 3c2ca311c56d4e244f58b4fabf8f8166 144 Pfam PF07963 Prokaryotic N-terminal methylation motif 24 47 1.0E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site syc1450_d 3c2ca311c56d4e244f58b4fabf8f8166 144 SUPERFAMILY SSF54523 27 113 1.26E-15 T 11-10-2018 syc1450_d 3c2ca311c56d4e244f58b4fabf8f8166 144 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 25 47 2.3E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site syc1450_d 3c2ca311c56d4e244f58b4fabf8f8166 144 Gene3D G3DSA:3.30.700.10 27 143 6.6E-18 T 11-10-2018 syc0361_d 7004880e50ae378396eba15bdecbc47f 194 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 1 191 23.213 T 11-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 syc0361_d 7004880e50ae378396eba15bdecbc47f 194 Pfam PF12804 MobA-like NTP transferase domain 5 158 2.2E-32 T 11-10-2018 IPR025877 MobA-like NTP transferase syc0361_d 7004880e50ae378396eba15bdecbc47f 194 SUPERFAMILY SSF53448 1 188 1.19E-29 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases syc0361_d 7004880e50ae378396eba15bdecbc47f 194 Gene3D G3DSA:3.90.550.10 1 193 4.5E-46 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases syc1121_d 5b75c82f77c98817e8fcd40a5b63c127 288 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 241 267 - T 11-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 syc1121_d 5b75c82f77c98817e8fcd40a5b63c127 288 Pfam PF01148 Cytidylyltransferase family 3 282 8.9E-65 T 11-10-2018 syc0554_d 0900ac95e63d242ebd14581fdf7139dc 180 PIRSF PIRSF006135 1 171 2.3E-53 T 11-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 syc0554_d 0900ac95e63d242ebd14581fdf7139dc 180 Gene3D G3DSA:3.40.50.300 2 169 1.9E-45 T 11-10-2018 syc0554_d 0900ac95e63d242ebd14581fdf7139dc 180 SUPERFAMILY SSF52540 3 169 1.13E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0554_d 0900ac95e63d242ebd14581fdf7139dc 180 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 4 168 5.3E-55 T 11-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 syc0248_d a5dd30dfb059c37ee00dc853d277db68 536 ProSitePatterns PS00211 ABC transporters family signature. 426 440 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 syc0248_d a5dd30dfb059c37ee00dc853d277db68 536 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 229 254 6.4E-6 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 syc0248_d a5dd30dfb059c37ee00dc853d277db68 536 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 505 532 7.0E-6 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 syc0248_d a5dd30dfb059c37ee00dc853d277db68 536 Gene3D G3DSA:3.40.50.300 1 268 4.7E-84 T 11-10-2018 syc0248_d a5dd30dfb059c37ee00dc853d277db68 536 Gene3D G3DSA:3.40.50.300 269 534 1.2E-88 T 11-10-2018 syc0248_d a5dd30dfb059c37ee00dc853d277db68 536 Pfam PF00005 ABC transporter 301 453 8.9E-37 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 syc0248_d a5dd30dfb059c37ee00dc853d277db68 536 SUPERFAMILY SSF52540 3 254 3.38E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0248_d a5dd30dfb059c37ee00dc853d277db68 536 SMART SM00382 309 502 1.4E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain syc0248_d a5dd30dfb059c37ee00dc853d277db68 536 SMART SM00382 30 226 2.1E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain syc0248_d a5dd30dfb059c37ee00dc853d277db68 536 SUPERFAMILY SSF52540 272 525 5.22E-75 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0248_d a5dd30dfb059c37ee00dc853d277db68 536 Pfam PF00005 ABC transporter 21 177 2.7E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 syc0248_d a5dd30dfb059c37ee00dc853d277db68 536 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 syc0517_c e52ac78fae73f0148db81333e860ea96 304 ProSitePatterns PS00770 Aminotransferases class-IV signature. 190 219 - T 11-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 syc0517_c e52ac78fae73f0148db81333e860ea96 304 SUPERFAMILY SSF56752 7 298 1.02E-80 T 11-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 syc0517_c e52ac78fae73f0148db81333e860ea96 304 Gene3D G3DSA:3.30.470.10 5 143 1.3E-32 T 11-10-2018 syc0517_c e52ac78fae73f0148db81333e860ea96 304 Gene3D G3DSA:3.20.10.10 144 295 1.8E-42 T 11-10-2018 syc0517_c e52ac78fae73f0148db81333e860ea96 304 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 9 299 2.7E-78 T 11-10-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 syc0517_c e52ac78fae73f0148db81333e860ea96 304 Pfam PF01063 Amino-transferase class IV 54 264 1.7E-44 T 11-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 syc1576_d ce26464f97a32d5fea3a9766854a3003 438 SUPERFAMILY SSF55781 87 259 1.24E-51 T 11-10-2018 syc1576_d ce26464f97a32d5fea3a9766854a3003 438 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 265 432 6.2E-47 T 11-10-2018 IPR000160 GGDEF domain syc1576_d ce26464f97a32d5fea3a9766854a3003 438 SMART SM00267 258 434 5.2E-70 T 11-10-2018 IPR000160 GGDEF domain syc1576_d ce26464f97a32d5fea3a9766854a3003 438 Gene3D G3DSA:3.30.450.40 68 274 2.2E-58 T 11-10-2018 IPR029016 GAF-like domain superfamily syc1576_d ce26464f97a32d5fea3a9766854a3003 438 SMART SM00065 108 259 7.1E-25 T 11-10-2018 IPR003018 GAF domain GO:0005515 syc1576_d ce26464f97a32d5fea3a9766854a3003 438 Gene3D G3DSA:3.30.70.270 275 437 3.1E-51 T 11-10-2018 syc1576_d ce26464f97a32d5fea3a9766854a3003 438 Pfam PF01590 GAF domain 108 249 1.6E-17 T 11-10-2018 IPR003018 GAF domain GO:0005515 syc1576_d ce26464f97a32d5fea3a9766854a3003 438 SUPERFAMILY SSF55073 274 434 1.18E-47 T 11-10-2018 IPR029787 Nucleotide cyclase syc1576_d ce26464f97a32d5fea3a9766854a3003 438 Pfam PF00990 Diguanylate cyclase, GGDEF domain 271 429 5.4E-50 T 11-10-2018 IPR000160 GGDEF domain syc0655_d 9b090bd9c443de2812e9a4cd9be073f1 694 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 691 0.0 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 syc0655_d 9b090bd9c443de2812e9a4cd9be073f1 694 SUPERFAMILY SSF54211 478 598 5.06E-44 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold syc0655_d 9b090bd9c443de2812e9a4cd9be073f1 694 Hamap MF_00054_B Elongation factor G [fusA]. 6 690 110.096 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 syc0655_d 9b090bd9c443de2812e9a4cd9be073f1 694 SUPERFAMILY SSF54980 599 689 1.78E-29 T 11-10-2018 IPR035647 EF-G domain III/V-like syc0655_d 9b090bd9c443de2812e9a4cd9be073f1 694 SMART SM00838 599 686 8.1E-54 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like syc0655_d 9b090bd9c443de2812e9a4cd9be073f1 694 Pfam PF03764 Elongation factor G, domain IV 478 597 3.4E-46 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 syc0655_d 9b090bd9c443de2812e9a4cd9be073f1 694 Gene3D G3DSA:3.30.70.870 405 482 2.9E-32 T 11-10-2018 syc0655_d 9b090bd9c443de2812e9a4cd9be073f1 694 Pfam PF00679 Elongation factor G C-terminus 599 685 8.9E-32 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like syc0655_d 9b090bd9c443de2812e9a4cd9be073f1 694 SUPERFAMILY SSF50447 266 400 2.35E-34 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily syc0655_d 9b090bd9c443de2812e9a4cd9be073f1 694 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 180 2.1E-33 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 syc0655_d 9b090bd9c443de2812e9a4cd9be073f1 694 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site syc0655_d 9b090bd9c443de2812e9a4cd9be073f1 694 Pfam PF03144 Elongation factor Tu domain 2 323 390 5.9E-14 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 syc0655_d 9b090bd9c443de2812e9a4cd9be073f1 694 Gene3D G3DSA:2.40.30.10 296 404 8.4E-40 T 11-10-2018 syc0655_d 9b090bd9c443de2812e9a4cd9be073f1 694 Gene3D G3DSA:3.30.230.10 483 686 5.7E-91 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup syc0655_d 9b090bd9c443de2812e9a4cd9be073f1 694 Pfam PF14492 Elongation Factor G, domain II 403 476 5.0E-34 T 11-10-2018 syc0655_d 9b090bd9c443de2812e9a4cd9be073f1 694 SUPERFAMILY SSF54980 403 480 2.16E-25 T 11-10-2018 IPR035647 EF-G domain III/V-like syc0655_d 9b090bd9c443de2812e9a4cd9be073f1 694 Gene3D G3DSA:3.40.50.300 1 295 3.1E-109 T 11-10-2018 syc0655_d 9b090bd9c443de2812e9a4cd9be073f1 694 PRINTS PR00315 GTP-binding elongation factor signature 78 88 9.0E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 syc0655_d 9b090bd9c443de2812e9a4cd9be073f1 694 PRINTS PR00315 GTP-binding elongation factor signature 12 25 9.0E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 syc0655_d 9b090bd9c443de2812e9a4cd9be073f1 694 PRINTS PR00315 GTP-binding elongation factor signature 130 139 9.0E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 syc0655_d 9b090bd9c443de2812e9a4cd9be073f1 694 PRINTS PR00315 GTP-binding elongation factor signature 58 66 9.0E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 syc0655_d 9b090bd9c443de2812e9a4cd9be073f1 694 PRINTS PR00315 GTP-binding elongation factor signature 94 105 9.0E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 syc0655_d 9b090bd9c443de2812e9a4cd9be073f1 694 Gene3D G3DSA:3.30.70.240 603 673 5.7E-91 T 11-10-2018 syc0655_d 9b090bd9c443de2812e9a4cd9be073f1 694 SMART SM00889 479 597 7.1E-70 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 syc0655_d 9b090bd9c443de2812e9a4cd9be073f1 694 SUPERFAMILY SSF52540 6 283 9.15E-108 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0655_d 9b090bd9c443de2812e9a4cd9be073f1 694 Pfam PF00009 Elongation factor Tu GTP binding domain 9 283 5.4E-67 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 syc0815_c 4ee0ca97c7e587abf62b659d9d0dc718 395 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 4 382 7.7E-98 T 11-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 syc0815_c 4ee0ca97c7e587abf62b659d9d0dc718 395 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 392 38.743 T 11-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 syc0815_c 4ee0ca97c7e587abf62b659d9d0dc718 395 SUPERFAMILY SSF55205 2 393 8.5E-128 T 11-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 syc0815_c 4ee0ca97c7e587abf62b659d9d0dc718 395 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 391 5.0E-160 T 11-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 syc0815_c 4ee0ca97c7e587abf62b659d9d0dc718 395 Gene3D G3DSA:3.65.10.10 1 204 3.0E-153 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 syc0815_c 4ee0ca97c7e587abf62b659d9d0dc718 395 Gene3D G3DSA:3.65.10.10 206 389 3.0E-153 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 syc0710_c ced38be953ca26a79663d95d94788ce7 462 SUPERFAMILY SSF50249 7 101 4.19E-18 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold syc0710_c ced38be953ca26a79663d95d94788ce7 462 Gene3D G3DSA:2.40.50.140 2 104 4.6E-20 T 11-10-2018 syc0710_c ced38be953ca26a79663d95d94788ce7 462 Pfam PF00152 tRNA synthetases class II (D, K and N) 117 456 1.1E-85 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 syc0710_c ced38be953ca26a79663d95d94788ce7 462 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 462 1.2E-193 T 11-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 syc0710_c ced38be953ca26a79663d95d94788ce7 462 SUPERFAMILY SSF55681 94 460 2.9E-102 T 11-10-2018 syc0710_c ced38be953ca26a79663d95d94788ce7 462 PRINTS PR01042 Aspartyl-tRNA synthetase signature 204 216 1.6E-14 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 syc0710_c ced38be953ca26a79663d95d94788ce7 462 PRINTS PR01042 Aspartyl-tRNA synthetase signature 417 431 1.6E-14 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 syc0710_c ced38be953ca26a79663d95d94788ce7 462 PRINTS PR01042 Aspartyl-tRNA synthetase signature 220 233 1.6E-14 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 syc0710_c ced38be953ca26a79663d95d94788ce7 462 PRINTS PR01042 Aspartyl-tRNA synthetase signature 377 393 1.6E-14 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 syc0710_c ced38be953ca26a79663d95d94788ce7 462 Gene3D G3DSA:3.30.930.10 105 461 4.9E-114 T 11-10-2018 syc0710_c ced38be953ca26a79663d95d94788ce7 462 Pfam PF01336 OB-fold nucleic acid binding domain 19 97 1.1E-9 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 syc0710_c ced38be953ca26a79663d95d94788ce7 462 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 4 462 45.451 T 11-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 syc0371_d 6da62456537e0c2b62434ba7f9c08fe6 138 Pfam PF00301 Rubredoxin 40 86 4.9E-21 T 11-10-2018 IPR024935 Rubredoxin domain GO:0005506 syc0371_d 6da62456537e0c2b62434ba7f9c08fe6 138 SUPERFAMILY SSF57802 37 92 1.31E-20 T 11-10-2018 syc0371_d 6da62456537e0c2b62434ba7f9c08fe6 138 PRINTS PR00163 Rubredoxin signature 70 86 4.0E-9 T 11-10-2018 IPR024935 Rubredoxin domain GO:0005506 syc0371_d 6da62456537e0c2b62434ba7f9c08fe6 138 PRINTS PR00163 Rubredoxin signature 40 56 4.0E-9 T 11-10-2018 IPR024935 Rubredoxin domain GO:0005506 syc0371_d 6da62456537e0c2b62434ba7f9c08fe6 138 ProSitePatterns PS00202 Rubredoxin signature. 70 80 - T 11-10-2018 IPR018527 Rubredoxin, iron-binding site GO:0046872 syc0371_d 6da62456537e0c2b62434ba7f9c08fe6 138 Gene3D G3DSA:2.20.28.10 38 90 6.6E-23 T 11-10-2018 syc0079_c 7240a833a9f8001f69a20cc654f43e49 522 Pfam PF13282 Domain of unknown function (DUF4070) 360 501 6.0E-48 T 11-10-2018 IPR025274 Domain of unknown function DUF4070 syc0079_c 7240a833a9f8001f69a20cc654f43e49 522 Pfam PF04055 Radical SAM superfamily 173 331 1.2E-16 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 syc0079_c 7240a833a9f8001f69a20cc654f43e49 522 SMART SM00729 168 386 9.8E-14 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 syc0079_c 7240a833a9f8001f69a20cc654f43e49 522 Pfam PF02310 B12 binding domain 26 127 4.4E-12 T 11-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 syc0079_c 7240a833a9f8001f69a20cc654f43e49 522 Gene3D G3DSA:3.80.30.20 168 387 5.0E-16 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe syc0079_c 7240a833a9f8001f69a20cc654f43e49 522 SUPERFAMILY SSF102114 156 383 2.62E-29 T 11-10-2018 syc0079_c 7240a833a9f8001f69a20cc654f43e49 522 Gene3D G3DSA:3.40.50.280 34 143 2.2E-9 T 11-10-2018 syc1176_c 9599450b069c580134462a56c1b95b00 316 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 314 4.4E-115 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 syc1176_c 9599450b069c580134462a56c1b95b00 316 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 314 35.188 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 syc1176_c 9599450b069c580134462a56c1b95b00 316 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 300 313 - T 11-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 syc1176_c 9599450b069c580134462a56c1b95b00 316 SUPERFAMILY SSF52943 2 314 1.02E-86 T 11-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 syc1176_c 9599450b069c580134462a56c1b95b00 316 Gene3D G3DSA:3.40.1380.10 63 233 5.5E-94 T 11-10-2018 syc1176_c 9599450b069c580134462a56c1b95b00 316 PRINTS PR00126 ATP synthase gamma subunit signature 168 185 3.6E-39 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 syc1176_c 9599450b069c580134462a56c1b95b00 316 PRINTS PR00126 ATP synthase gamma subunit signature 261 280 3.6E-39 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 syc1176_c 9599450b069c580134462a56c1b95b00 316 PRINTS PR00126 ATP synthase gamma subunit signature 292 313 3.6E-39 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 syc1176_c 9599450b069c580134462a56c1b95b00 316 PRINTS PR00126 ATP synthase gamma subunit signature 75 94 3.6E-39 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 syc1176_c 9599450b069c580134462a56c1b95b00 316 Gene3D G3DSA:1.10.287.80 7 310 5.5E-94 T 11-10-2018 syc1176_c 9599450b069c580134462a56c1b95b00 316 Pfam PF00231 ATP synthase 3 314 2.2E-94 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 syc0645_d 8c7cad99fca9257082c04b80ee9de051 390 Gene3D G3DSA:3.50.50.60 125 198 1.4E-5 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc0645_d 8c7cad99fca9257082c04b80ee9de051 390 SUPERFAMILY SSF55424 260 347 4.3E-15 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 syc0645_d 8c7cad99fca9257082c04b80ee9de051 390 SUPERFAMILY SSF51905 1 197 7.61E-8 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc0645_d 8c7cad99fca9257082c04b80ee9de051 390 Gene3D G3DSA:3.50.50.60 81 124 1.4E-5 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc0645_d 8c7cad99fca9257082c04b80ee9de051 390 Gene3D G3DSA:3.30.390.30 256 373 1.1E-15 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 syc0645_d 8c7cad99fca9257082c04b80ee9de051 390 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 259 339 1.8E-12 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 syc1445_d 62f41259d99c40be50b0be6a452a7c3b 255 Pfam PF04989 Cephalosporin hydroxylase 41 254 1.5E-90 T 11-10-2018 IPR007072 Rhamnosyl O-methyltransferase/Cephalosporin hydroxylase GO:0008168|GO:0008610 syc1445_d 62f41259d99c40be50b0be6a452a7c3b 255 Gene3D G3DSA:3.40.50.150 56 244 7.2E-29 T 11-10-2018 syc1445_d 62f41259d99c40be50b0be6a452a7c3b 255 SUPERFAMILY SSF53335 40 254 4.98E-34 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase syc1558_d c533bf16e6cc09253cda4677bda05697 242 TIGRFAM TIGR00073 hypB: hydrogenase accessory protein HypB 24 233 1.4E-82 T 11-10-2018 IPR004392 Hydrogenase maturation factor HypB GO:0016151|GO:0051604 syc1558_d c533bf16e6cc09253cda4677bda05697 242 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 51 212 3.5E-30 T 11-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain syc1558_d c533bf16e6cc09253cda4677bda05697 242 SUPERFAMILY SSF52540 21 234 4.4E-30 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc1558_d c533bf16e6cc09253cda4677bda05697 242 PIRSF PIRSF005624 17 242 3.9E-93 T 11-10-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 syc1558_d c533bf16e6cc09253cda4677bda05697 242 Gene3D G3DSA:3.40.50.300 31 237 1.9E-60 T 11-10-2018 syc1079_d eb8c83757398e47c21ea428a7ae67767 229 Pfam PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus 131 227 2.4E-35 T 11-10-2018 IPR010940 Magnesium-protoporphyrin IX methyltransferase, C-terminal GO:0015995|GO:0046406 KEGG: 00860+2.1.1.11|MetaCyc: PWY-5531|MetaCyc: PWY-7159 syc1079_d eb8c83757398e47c21ea428a7ae67767 229 TIGRFAM TIGR02021 BchM-ChlM: magnesium protoporphyrin O-methyltransferase 7 224 1.1E-74 T 11-10-2018 IPR010251 Magnesium-protoporphyrin IX methyltransferase GO:0015995|GO:0046406 KEGG: 00860+2.1.1.11|MetaCyc: PWY-5531|MetaCyc: PWY-7159 syc1079_d eb8c83757398e47c21ea428a7ae67767 229 SUPERFAMILY SSF53335 5 210 2.07E-31 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase syc1079_d eb8c83757398e47c21ea428a7ae67767 229 Gene3D G3DSA:3.40.50.150 1 229 3.5E-68 T 11-10-2018 syc0615_c ece1ca2cddc6680ae666f6aacb25f9fc 241 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 2 237 31.285 T 11-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 syc0615_c ece1ca2cddc6680ae666f6aacb25f9fc 241 ProSitePatterns PS01058 SAICAR synthetase signature 2. 171 179 - T 11-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 syc0615_c ece1ca2cddc6680ae666f6aacb25f9fc 241 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 5 236 8.8E-77 T 11-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 syc0615_c ece1ca2cddc6680ae666f6aacb25f9fc 241 SUPERFAMILY SSF56104 4 237 8.83E-79 T 11-10-2018 syc0615_c ece1ca2cddc6680ae666f6aacb25f9fc 241 Pfam PF01259 SAICAR synthetase 5 232 3.8E-64 T 11-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 syc0615_c ece1ca2cddc6680ae666f6aacb25f9fc 241 ProSitePatterns PS01057 SAICAR synthetase signature 1. 84 98 - T 11-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 syc0615_c ece1ca2cddc6680ae666f6aacb25f9fc 241 Gene3D G3DSA:3.30.470.20 83 223 5.1E-90 T 11-10-2018 syc0615_c ece1ca2cddc6680ae666f6aacb25f9fc 241 Gene3D G3DSA:3.30.200.20 4 233 5.1E-90 T 11-10-2018 syc1796_c d0c55d838767767c25ad22404b903ca3 228 SMART SM00862 150 225 3.4E-26 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 syc1796_c d0c55d838767767c25ad22404b903ca3 228 Gene3D G3DSA:3.40.50.2300 1 126 1.1E-29 T 11-10-2018 syc1796_c d0c55d838767767c25ad22404b903ca3 228 SUPERFAMILY SSF52172 6 180 5.27E-29 T 11-10-2018 IPR011006 CheY-like superfamily syc1796_c d0c55d838767767c25ad22404b903ca3 228 Pfam PF00072 Response regulator receiver domain 9 118 9.1E-17 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 syc1796_c d0c55d838767767c25ad22404b903ca3 228 SUPERFAMILY SSF46894 126 226 2.15E-31 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 syc1796_c d0c55d838767767c25ad22404b903ca3 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 225 4.4E-27 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 syc1796_c d0c55d838767767c25ad22404b903ca3 228 SMART SM00448 7 118 4.3E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 syc1796_c d0c55d838767767c25ad22404b903ca3 228 Gene3D G3DSA:1.10.10.10 127 228 1.7E-35 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily syc0879_d 9d777df2de4adb3458a6b90b1fa1219f 399 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 191 204 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 syc0879_d 9d777df2de4adb3458a6b90b1fa1219f 399 Gene3D G3DSA:1.10.10.10 315 399 3.3E-34 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily syc0879_d 9d777df2de4adb3458a6b90b1fa1219f 399 SUPERFAMILY SSF88946 85 237 1.02E-57 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 syc0879_d 9d777df2de4adb3458a6b90b1fa1219f 399 Pfam PF04539 Sigma-70 region 3 246 321 3.9E-26 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 syc0879_d 9d777df2de4adb3458a6b90b1fa1219f 399 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 163 387 5.5E-40 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 syc0879_d 9d777df2de4adb3458a6b90b1fa1219f 399 SUPERFAMILY SSF88659 297 397 1.14E-28 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like syc0879_d 9d777df2de4adb3458a6b90b1fa1219f 399 Pfam PF00140 Sigma-70 factor, region 1.2 89 119 2.8E-12 T 11-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 syc0879_d 9d777df2de4adb3458a6b90b1fa1219f 399 Pfam PF04545 Sigma-70, region 4 334 387 7.8E-21 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 syc0879_d 9d777df2de4adb3458a6b90b1fa1219f 399 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 163 398 1.2E-115 T 11-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 syc0879_d 9d777df2de4adb3458a6b90b1fa1219f 399 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 14 399 31.023 T 11-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 syc0879_d 9d777df2de4adb3458a6b90b1fa1219f 399 Gene3D G3DSA:1.20.120.1810 83 236 1.5E-53 T 11-10-2018 syc0879_d 9d777df2de4adb3458a6b90b1fa1219f 399 Pfam PF04542 Sigma-70 region 2 167 237 8.9E-23 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 syc0879_d 9d777df2de4adb3458a6b90b1fa1219f 399 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 359 385 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 syc0879_d 9d777df2de4adb3458a6b90b1fa1219f 399 TIGRFAM TIGR02997 Sig70-cyanoRpoD: RNA polymerase sigma factor, cyanobacterial RpoD-like family 89 386 4.0E-129 T 11-10-2018 IPR017848 RNA polymerase sigma factor, RpoD-like, cyanobacteria syc0879_d 9d777df2de4adb3458a6b90b1fa1219f 399 PRINTS PR00046 Major sigma-70 factor signature 215 223 2.4E-30 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 syc0879_d 9d777df2de4adb3458a6b90b1fa1219f 399 PRINTS PR00046 Major sigma-70 factor signature 374 385 2.4E-30 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 syc0879_d 9d777df2de4adb3458a6b90b1fa1219f 399 PRINTS PR00046 Major sigma-70 factor signature 359 374 2.4E-30 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 syc0879_d 9d777df2de4adb3458a6b90b1fa1219f 399 PRINTS PR00046 Major sigma-70 factor signature 191 204 2.4E-30 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 syc0879_d 9d777df2de4adb3458a6b90b1fa1219f 399 PRINTS PR00046 Major sigma-70 factor signature 338 350 2.4E-30 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 syc0879_d 9d777df2de4adb3458a6b90b1fa1219f 399 Gene3D G3DSA:1.10.10.10 240 314 7.3E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily syc0879_d 9d777df2de4adb3458a6b90b1fa1219f 399 SUPERFAMILY SSF88659 240 313 1.22E-18 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like syc1561_c 3fb60a6be4a44d13c50b8035452fe305 357 Gene3D G3DSA:3.40.50.300 15 187 1.1E-10 T 11-10-2018 syc1561_c 3fb60a6be4a44d13c50b8035452fe305 357 SUPERFAMILY SSF52540 16 255 2.31E-13 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc1683_d bd600f5e2c0254a65ebd3696c2c79d43 635 SUPERFAMILY SSF51905 6 260 3.29E-46 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc1683_d bd600f5e2c0254a65ebd3696c2c79d43 635 Gene3D G3DSA:1.10.10.1800 460 550 8.7E-17 T 11-10-2018 syc1683_d bd600f5e2c0254a65ebd3696c2c79d43 635 Gene3D G3DSA:1.10.150.570 570 620 3.6E-21 T 11-10-2018 syc1683_d bd600f5e2c0254a65ebd3696c2c79d43 635 Pfam PF13932 GidA associated domain 403 616 4.3E-67 T 11-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 syc1683_d bd600f5e2c0254a65ebd3696c2c79d43 635 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 40.019 T 11-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 syc1683_d bd600f5e2c0254a65ebd3696c2c79d43 635 SMART SM01228 546 617 2.1E-38 T 11-10-2018 syc1683_d bd600f5e2c0254a65ebd3696c2c79d43 635 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 369 392 - T 11-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 syc1683_d bd600f5e2c0254a65ebd3696c2c79d43 635 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 274 288 - T 11-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 syc1683_d bd600f5e2c0254a65ebd3696c2c79d43 635 Gene3D G3DSA:3.50.50.60 318 459 7.6E-50 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc1683_d bd600f5e2c0254a65ebd3696c2c79d43 635 Gene3D G3DSA:3.50.50.60 2 227 2.0E-83 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc1683_d bd600f5e2c0254a65ebd3696c2c79d43 635 Pfam PF01134 Glucose inhibited division protein A 8 399 1.0E-156 T 11-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 syc1683_d bd600f5e2c0254a65ebd3696c2c79d43 635 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 6.2E-269 T 11-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 syc1660_d 39d8f7772b67e845a51452a3daeab42b 241 PRINTS PR00599 Methionine aminopeptidase-1 signature 55 68 1.1E-20 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 syc1660_d 39d8f7772b67e845a51452a3daeab42b 241 PRINTS PR00599 Methionine aminopeptidase-1 signature 148 160 1.1E-20 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 syc1660_d 39d8f7772b67e845a51452a3daeab42b 241 PRINTS PR00599 Methionine aminopeptidase-1 signature 180 192 1.1E-20 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 syc1660_d 39d8f7772b67e845a51452a3daeab42b 241 PRINTS PR00599 Methionine aminopeptidase-1 signature 78 94 1.1E-20 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 syc1660_d 39d8f7772b67e845a51452a3daeab42b 241 Gene3D G3DSA:3.90.230.10 1 241 1.8E-96 T 11-10-2018 syc1660_d 39d8f7772b67e845a51452a3daeab42b 241 Hamap MF_01974 Methionine aminopeptidase [map]. 1 238 37.902 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 syc1660_d 39d8f7772b67e845a51452a3daeab42b 241 Pfam PF00557 Metallopeptidase family M24 1 229 1.3E-52 T 11-10-2018 IPR000994 Peptidase M24 syc1660_d 39d8f7772b67e845a51452a3daeab42b 241 SUPERFAMILY SSF55920 1 237 1.44E-81 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like syc1660_d 39d8f7772b67e845a51452a3daeab42b 241 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 1 237 7.4E-90 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 syc1660_d 39d8f7772b67e845a51452a3daeab42b 241 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 154 172 - T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 syc1406_d abb2c2cf2e5ec535eb293ea77ae34c1e 594 SUPERFAMILY SSF51621 3 346 2.65E-101 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 syc1406_d abb2c2cf2e5ec535eb293ea77ae34c1e 594 Gene3D G3DSA:3.50.30.10 476 586 5.5E-31 T 11-10-2018 syc1406_d abb2c2cf2e5ec535eb293ea77ae34c1e 594 Gene3D G3DSA:3.40.1380.20 341 470 1.9E-179 T 11-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 syc1406_d abb2c2cf2e5ec535eb293ea77ae34c1e 594 SUPERFAMILY SSF52935 328 474 3.53E-39 T 11-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 syc1406_d abb2c2cf2e5ec535eb293ea77ae34c1e 594 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 8 474 2.4E-171 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 syc1406_d abb2c2cf2e5ec535eb293ea77ae34c1e 594 Gene3D G3DSA:3.20.20.60 8 340 1.9E-179 T 11-10-2018 syc1406_d abb2c2cf2e5ec535eb293ea77ae34c1e 594 Pfam PF02887 Pyruvate kinase, alpha/beta domain 359 471 2.8E-33 T 11-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 syc1406_d abb2c2cf2e5ec535eb293ea77ae34c1e 594 Pfam PF00224 Pyruvate kinase, barrel domain 8 345 1.0E-125 T 11-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 syc1406_d abb2c2cf2e5ec535eb293ea77ae34c1e 594 PRINTS PR01050 Pyruvate kinase family signature 318 334 5.5E-69 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 syc1406_d abb2c2cf2e5ec535eb293ea77ae34c1e 594 PRINTS PR01050 Pyruvate kinase family signature 65 81 5.5E-69 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 syc1406_d abb2c2cf2e5ec535eb293ea77ae34c1e 594 PRINTS PR01050 Pyruvate kinase family signature 249 273 5.5E-69 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 syc1406_d abb2c2cf2e5ec535eb293ea77ae34c1e 594 PRINTS PR01050 Pyruvate kinase family signature 274 298 5.5E-69 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 syc1406_d abb2c2cf2e5ec535eb293ea77ae34c1e 594 PRINTS PR01050 Pyruvate kinase family signature 222 248 5.5E-69 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 syc1406_d abb2c2cf2e5ec535eb293ea77ae34c1e 594 PRINTS PR01050 Pyruvate kinase family signature 299 317 5.5E-69 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 syc1406_d abb2c2cf2e5ec535eb293ea77ae34c1e 594 PRINTS PR01050 Pyruvate kinase family signature 192 206 5.5E-69 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 syc1406_d abb2c2cf2e5ec535eb293ea77ae34c1e 594 Gene3D G3DSA:2.40.33.10 76 174 1.9E-179 T 11-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 syc1406_d abb2c2cf2e5ec535eb293ea77ae34c1e 594 SUPERFAMILY SSF50800 77 172 9.77E-27 T 11-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily syc1406_d abb2c2cf2e5ec535eb293ea77ae34c1e 594 Pfam PF00391 PEP-utilising enzyme, mobile domain 506 576 5.9E-21 T 11-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 syc1406_d abb2c2cf2e5ec535eb293ea77ae34c1e 594 ProSitePatterns PS00110 Pyruvate kinase active site signature. 220 232 - T 11-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 syc1406_d abb2c2cf2e5ec535eb293ea77ae34c1e 594 SUPERFAMILY SSF52009 469 583 1.7E-26 T 11-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 syc0003_d 6d8c83bd29521ebab8150ef283c6fee3 84 SUPERFAMILY SSF47598 3 66 1.45E-16 T 11-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 syc0003_d 6d8c83bd29521ebab8150ef283c6fee3 84 Gene3D G3DSA:1.10.1220.10 11 57 4.0E-15 T 11-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 syc1556_d 87396e51e4da9813af404c8271b5c6f7 152 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 3 143 2.8E-21 T 11-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 syc1556_d 87396e51e4da9813af404c8271b5c6f7 152 Gene3D G3DSA:3.40.50.1450 2 150 3.6E-28 T 11-10-2018 IPR023430 Peptidase HybD-like domain superfamily syc1556_d 87396e51e4da9813af404c8271b5c6f7 152 SUPERFAMILY SSF53163 3 145 2.25E-30 T 11-10-2018 IPR023430 Peptidase HybD-like domain superfamily syc1317_d 4aab37f5560e036b5c85bf69676b7cc1 964 SUPERFAMILY SSF47807 198 312 5.23E-34 T 11-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily syc1317_d 4aab37f5560e036b5c85bf69676b7cc1 964 Gene3D G3DSA:1.20.1060.10 565 679 4.0E-39 T 11-10-2018 syc1317_d 4aab37f5560e036b5c85bf69676b7cc1 964 SMART SM00474 353 539 3.9E-30 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 syc1317_d 4aab37f5560e036b5c85bf69676b7cc1 964 SUPERFAMILY SSF53098 356 539 2.88E-45 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily syc1317_d 4aab37f5560e036b5c85bf69676b7cc1 964 SUPERFAMILY SSF56672 547 963 2.33E-142 T 11-10-2018 syc1317_d 4aab37f5560e036b5c85bf69676b7cc1 964 SMART SM00475 16 288 2.3E-120 T 11-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 syc1317_d 4aab37f5560e036b5c85bf69676b7cc1 964 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 198 292 6.6E-32 T 11-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 syc1317_d 4aab37f5560e036b5c85bf69676b7cc1 964 TIGRFAM TIGR00593 pola: DNA polymerase I 19 964 8.9E-298 T 11-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 syc1317_d 4aab37f5560e036b5c85bf69676b7cc1 964 SMART SM00279 200 235 4.7E-17 T 11-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 syc1317_d 4aab37f5560e036b5c85bf69676b7cc1 964 Gene3D G3DSA:3.30.420.10 354 563 7.5E-54 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 syc1317_d 4aab37f5560e036b5c85bf69676b7cc1 964 Gene3D G3DSA:1.10.150.20 731 890 5.0E-100 T 11-10-2018 syc1317_d 4aab37f5560e036b5c85bf69676b7cc1 964 SMART SM00482 708 928 5.3E-92 T 11-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 syc1317_d 4aab37f5560e036b5c85bf69676b7cc1 964 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 19 197 1.4E-45 T 11-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 syc1317_d 4aab37f5560e036b5c85bf69676b7cc1 964 SUPERFAMILY SSF88723 17 197 2.07E-43 T 11-10-2018 IPR029060 PIN-like domain superfamily syc1317_d 4aab37f5560e036b5c85bf69676b7cc1 964 Gene3D G3DSA:3.30.70.370 685 960 5.0E-100 T 11-10-2018 syc1317_d 4aab37f5560e036b5c85bf69676b7cc1 964 Gene3D G3DSA:3.40.50.1010 19 304 2.2E-90 T 11-10-2018 syc1317_d 4aab37f5560e036b5c85bf69676b7cc1 964 PRINTS PR00868 DNA-polymerase family A (pol I) signature 911 924 1.6E-69 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 syc1317_d 4aab37f5560e036b5c85bf69676b7cc1 964 PRINTS PR00868 DNA-polymerase family A (pol I) signature 811 822 1.6E-69 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 syc1317_d 4aab37f5560e036b5c85bf69676b7cc1 964 PRINTS PR00868 DNA-polymerase family A (pol I) signature 774 799 1.6E-69 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 syc1317_d 4aab37f5560e036b5c85bf69676b7cc1 964 PRINTS PR00868 DNA-polymerase family A (pol I) signature 883 899 1.6E-69 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 syc1317_d 4aab37f5560e036b5c85bf69676b7cc1 964 PRINTS PR00868 DNA-polymerase family A (pol I) signature 700 715 1.6E-69 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 syc1317_d 4aab37f5560e036b5c85bf69676b7cc1 964 PRINTS PR00868 DNA-polymerase family A (pol I) signature 833 844 1.6E-69 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 syc1317_d 4aab37f5560e036b5c85bf69676b7cc1 964 PRINTS PR00868 DNA-polymerase family A (pol I) signature 677 699 1.6E-69 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 syc1317_d 4aab37f5560e036b5c85bf69676b7cc1 964 PRINTS PR00868 DNA-polymerase family A (pol I) signature 722 745 1.6E-69 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 syc1317_d 4aab37f5560e036b5c85bf69676b7cc1 964 PRINTS PR00868 DNA-polymerase family A (pol I) signature 752 765 1.6E-69 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 syc1317_d 4aab37f5560e036b5c85bf69676b7cc1 964 Pfam PF00476 DNA polymerase family A 573 962 2.0E-140 T 11-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 syc1317_d 4aab37f5560e036b5c85bf69676b7cc1 964 Pfam PF01612 3'-5' exonuclease 354 534 4.5E-31 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 syc1317_d 4aab37f5560e036b5c85bf69676b7cc1 964 Gene3D G3DSA:1.10.150.20 201 273 2.2E-90 T 11-10-2018 syc1789_d 839083f075dbf943ed22c46295f0e479 544 Gene3D G3DSA:1.10.560.10 7 521 8.4E-225 T 11-10-2018 IPR027413 GroEL-like equatorial domain superfamily syc1789_d 839083f075dbf943ed22c46295f0e479 544 Hamap MF_00600 60 kDa chaperonin [groL]. 1 542 41.555 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 syc1789_d 839083f075dbf943ed22c46295f0e479 544 SUPERFAMILY SSF52029 184 374 2.09E-80 T 11-10-2018 IPR027409 GroEL-like apical domain superfamily syc1789_d 839083f075dbf943ed22c46295f0e479 544 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 525 8.0E-106 T 11-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 syc1789_d 839083f075dbf943ed22c46295f0e479 544 Gene3D G3DSA:3.50.7.10 191 370 8.4E-225 T 11-10-2018 IPR027409 GroEL-like apical domain superfamily syc1789_d 839083f075dbf943ed22c46295f0e479 544 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 526 6.8E-252 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 syc1789_d 839083f075dbf943ed22c46295f0e479 544 SUPERFAMILY SSF48592 370 525 7.63E-34 T 11-10-2018 IPR027413 GroEL-like equatorial domain superfamily syc1789_d 839083f075dbf943ed22c46295f0e479 544 Gene3D G3DSA:3.30.260.10 135 408 8.4E-225 T 11-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily syc1789_d 839083f075dbf943ed22c46295f0e479 544 SUPERFAMILY SSF48592 1 226 2.88E-59 T 11-10-2018 IPR027413 GroEL-like equatorial domain superfamily syc1789_d 839083f075dbf943ed22c46295f0e479 544 PRINTS PR00298 60kDa chaperonin signature 82 109 2.5E-73 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 syc1789_d 839083f075dbf943ed22c46295f0e479 544 PRINTS PR00298 60kDa chaperonin signature 267 290 2.5E-73 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 syc1789_d 839083f075dbf943ed22c46295f0e479 544 PRINTS PR00298 60kDa chaperonin signature 26 52 2.5E-73 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 syc1789_d 839083f075dbf943ed22c46295f0e479 544 PRINTS PR00298 60kDa chaperonin signature 396 417 2.5E-73 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 syc1789_d 839083f075dbf943ed22c46295f0e479 544 PRINTS PR00298 60kDa chaperonin signature 348 373 2.5E-73 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 syc1789_d 839083f075dbf943ed22c46295f0e479 544 ProSitePatterns PS00296 Chaperonins cpn60 signature. 403 414 - T 11-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 syc2355_c 5d2a1136a2a12081dc6c8e84f7bf5c11 261 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 syc2355_c 5d2a1136a2a12081dc6c8e84f7bf5c11 261 Pfam PF00005 ABC transporter 25 180 1.2E-21 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 syc2355_c 5d2a1136a2a12081dc6c8e84f7bf5c11 261 SUPERFAMILY SSF52540 8 240 4.85E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc2355_c 5d2a1136a2a12081dc6c8e84f7bf5c11 261 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 10 252 1.8E-111 T 11-10-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524 syc2355_c 5d2a1136a2a12081dc6c8e84f7bf5c11 261 SMART SM00382 34 238 1.1E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain syc2355_c 5d2a1136a2a12081dc6c8e84f7bf5c11 261 Gene3D G3DSA:3.40.50.300 9 256 3.3E-59 T 11-10-2018 syc1037_d f68371e93524ea8a9b26fdfe2fe81104 589 SUPERFAMILY SSF56519 76 224 5.89E-28 T 11-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 syc1037_d f68371e93524ea8a9b26fdfe2fe81104 589 SUPERFAMILY SSF56601 238 580 8.54E-92 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like syc1037_d f68371e93524ea8a9b26fdfe2fe81104 589 Pfam PF00905 Penicillin binding protein transpeptidase domain 263 574 5.4E-74 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 syc1037_d f68371e93524ea8a9b26fdfe2fe81104 589 Gene3D G3DSA:3.40.710.10 299 498 4.2E-97 T 11-10-2018 syc1037_d f68371e93524ea8a9b26fdfe2fe81104 589 Gene3D G3DSA:3.90.1310.30 75 225 5.3E-26 T 11-10-2018 syc1037_d f68371e93524ea8a9b26fdfe2fe81104 589 Gene3D G3DSA:3.30.450.330 240 577 4.2E-97 T 11-10-2018 syc1037_d f68371e93524ea8a9b26fdfe2fe81104 589 Pfam PF03717 Penicillin-binding Protein dimerisation domain 78 186 3.7E-9 T 11-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 syc1597_c 1e65066e4f096d953da5c73e28b26d59 217 Gene3D G3DSA:3.40.50.1000 6 216 1.6E-52 T 11-10-2018 IPR023214 HAD superfamily syc1597_c 1e65066e4f096d953da5c73e28b26d59 217 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 1.5E-5 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 syc1597_c 1e65066e4f096d953da5c73e28b26d59 217 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 202 215 1.5E-5 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 syc1597_c 1e65066e4f096d953da5c73e28b26d59 217 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 126 139 1.5E-5 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 syc1597_c 1e65066e4f096d953da5c73e28b26d59 217 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 156 172 1.5E-5 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 syc1597_c 1e65066e4f096d953da5c73e28b26d59 217 Pfam PF13419 Haloacid dehalogenase-like hydrolase 95 212 5.8E-16 T 11-10-2018 syc1597_c 1e65066e4f096d953da5c73e28b26d59 217 Gene3D G3DSA:1.10.150.720 20 108 1.6E-52 T 11-10-2018 syc1597_c 1e65066e4f096d953da5c73e28b26d59 217 SUPERFAMILY SSF56784 5 215 7.47E-37 T 11-10-2018 IPR036412 HAD-like superfamily syc1597_c 1e65066e4f096d953da5c73e28b26d59 217 TIGRFAM TIGR02252 DREG-2: HAD hydrolase, REG-2-like, family IA 5 212 1.1E-72 T 11-10-2018 IPR011949 HAD-superfamily hydrolase, subfamily IA, REG-2-like syc1597_c 1e65066e4f096d953da5c73e28b26d59 217 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 128 207 5.6E-9 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 syc0200_d b9a73c50a2c545ac59f7e6c7ccd25e96 929 SMART SM00091 141 208 7.5E-8 T 11-10-2018 IPR000014 PAS domain syc0200_d b9a73c50a2c545ac59f7e6c7ccd25e96 929 SMART SM00091 370 443 1.2E-6 T 11-10-2018 IPR000014 PAS domain syc0200_d b9a73c50a2c545ac59f7e6c7ccd25e96 929 SMART SM00091 268 334 0.0035 T 11-10-2018 IPR000014 PAS domain syc0200_d b9a73c50a2c545ac59f7e6c7ccd25e96 929 Pfam PF13188 PAS domain 141 189 3.2E-9 T 11-10-2018 IPR000014 PAS domain syc0200_d b9a73c50a2c545ac59f7e6c7ccd25e96 929 Pfam PF13188 PAS domain 270 314 2.0E-4 T 11-10-2018 IPR000014 PAS domain syc0200_d b9a73c50a2c545ac59f7e6c7ccd25e96 929 SUPERFAMILY SSF141868 675 922 4.58E-92 T 11-10-2018 IPR035919 EAL domain superfamily syc0200_d b9a73c50a2c545ac59f7e6c7ccd25e96 929 PIRSF PIRSF005925 359 495 1.7E-16 T 11-10-2018 IPR012226 Diguanylate cyclase/phosphodiesterase syc0200_d b9a73c50a2c545ac59f7e6c7ccd25e96 929 PIRSF PIRSF005925 265 324 14.0 T 11-10-2018 IPR012226 Diguanylate cyclase/phosphodiesterase syc0200_d b9a73c50a2c545ac59f7e6c7ccd25e96 929 PIRSF PIRSF005925 134 274 0.12 T 11-10-2018 IPR012226 Diguanylate cyclase/phosphodiesterase syc0200_d b9a73c50a2c545ac59f7e6c7ccd25e96 929 PIRSF PIRSF005925 486 928 4.8E-137 T 11-10-2018 IPR012226 Diguanylate cyclase/phosphodiesterase syc0200_d b9a73c50a2c545ac59f7e6c7ccd25e96 929 Pfam PF00072 Response regulator receiver domain 11 121 2.5E-13 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 syc0200_d b9a73c50a2c545ac59f7e6c7ccd25e96 929 SMART SM00052 669 915 8.0E-123 T 11-10-2018 IPR001633 EAL domain syc0200_d b9a73c50a2c545ac59f7e6c7ccd25e96 929 SMART SM00086 322 362 24.0 T 11-10-2018 IPR001610 PAC motif syc0200_d b9a73c50a2c545ac59f7e6c7ccd25e96 929 SMART SM00086 445 487 2.9E-13 T 11-10-2018 IPR001610 PAC motif syc0200_d b9a73c50a2c545ac59f7e6c7ccd25e96 929 SMART SM00086 216 256 190.0 T 11-10-2018 IPR001610 PAC motif syc0200_d b9a73c50a2c545ac59f7e6c7ccd25e96 929 Gene3D G3DSA:3.40.50.2300 5 130 3.4E-19 T 11-10-2018 syc0200_d b9a73c50a2c545ac59f7e6c7ccd25e96 929 Pfam PF00990 Diguanylate cyclase, GGDEF domain 498 655 8.4E-50 T 11-10-2018 IPR000160 GGDEF domain syc0200_d b9a73c50a2c545ac59f7e6c7ccd25e96 929 Gene3D G3DSA:3.30.450.20 255 359 1.9E-6 T 11-10-2018 syc0200_d b9a73c50a2c545ac59f7e6c7ccd25e96 929 Gene3D G3DSA:3.30.450.20 131 254 1.0E-18 T 11-10-2018 syc0200_d b9a73c50a2c545ac59f7e6c7ccd25e96 929 SUPERFAMILY SSF52172 8 144 2.28E-22 T 11-10-2018 IPR011006 CheY-like superfamily syc0200_d b9a73c50a2c545ac59f7e6c7ccd25e96 929 SMART SM00448 8 123 6.4E-12 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 syc0200_d b9a73c50a2c545ac59f7e6c7ccd25e96 929 SUPERFAMILY SSF55073 503 661 1.49E-49 T 11-10-2018 IPR029787 Nucleotide cyclase syc0200_d b9a73c50a2c545ac59f7e6c7ccd25e96 929 Gene3D G3DSA:3.30.450.20 364 495 2.9E-44 T 11-10-2018 syc0200_d b9a73c50a2c545ac59f7e6c7ccd25e96 929 Pfam PF13426 PAS domain 383 486 1.6E-21 T 11-10-2018 IPR000014 PAS domain syc0200_d b9a73c50a2c545ac59f7e6c7ccd25e96 929 Pfam PF00563 EAL domain 675 910 2.3E-77 T 11-10-2018 IPR001633 EAL domain syc0200_d b9a73c50a2c545ac59f7e6c7ccd25e96 929 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 495 657 5.4E-45 T 11-10-2018 IPR000160 GGDEF domain syc0200_d b9a73c50a2c545ac59f7e6c7ccd25e96 929 Gene3D G3DSA:3.30.70.270 496 672 1.3E-57 T 11-10-2018 syc0200_d b9a73c50a2c545ac59f7e6c7ccd25e96 929 SMART SM00267 487 659 3.0E-63 T 11-10-2018 IPR000160 GGDEF domain syc0200_d b9a73c50a2c545ac59f7e6c7ccd25e96 929 SUPERFAMILY SSF55785 377 487 7.03E-29 T 11-10-2018 IPR035965 PAS domain superfamily syc0200_d b9a73c50a2c545ac59f7e6c7ccd25e96 929 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 137 261 4.7E-16 T 11-10-2018 IPR000014 PAS domain syc0200_d b9a73c50a2c545ac59f7e6c7ccd25e96 929 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 392 494 2.4E-20 T 11-10-2018 IPR000014 PAS domain syc0200_d b9a73c50a2c545ac59f7e6c7ccd25e96 929 SUPERFAMILY SSF55785 128 254 6.13E-17 T 11-10-2018 IPR035965 PAS domain superfamily syc0200_d b9a73c50a2c545ac59f7e6c7ccd25e96 929 Gene3D G3DSA:3.20.20.450 673 924 3.3E-103 T 11-10-2018 IPR035919 EAL domain superfamily syc0200_d b9a73c50a2c545ac59f7e6c7ccd25e96 929 SUPERFAMILY SSF55785 253 359 9.72E-9 T 11-10-2018 IPR035965 PAS domain superfamily syc0078_d 8e19ccd4e1bab9ca3726fe62cacbf4ee 501 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 263 391 3.3E-28 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 syc0078_d 8e19ccd4e1bab9ca3726fe62cacbf4ee 501 SUPERFAMILY SSF52540 228 459 3.42E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0078_d 8e19ccd4e1bab9ca3726fe62cacbf4ee 501 SMART SM00382 259 394 7.2E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain syc0078_d 8e19ccd4e1bab9ca3726fe62cacbf4ee 501 Gene3D G3DSA:3.40.50.300 224 393 4.2E-36 T 11-10-2018 syc0078_d 8e19ccd4e1bab9ca3726fe62cacbf4ee 501 SUPERFAMILY SSF52540 71 210 2.1E-10 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0078_d 8e19ccd4e1bab9ca3726fe62cacbf4ee 501 Gene3D G3DSA:1.10.8.60 394 464 7.2E-12 T 11-10-2018 syc1393_c 116dba2eb3e471326cc259feec1f1a36 531 Gene3D G3DSA:3.30.420.40 3 375 1.0E-55 T 11-10-2018 syc1393_c 116dba2eb3e471326cc259feec1f1a36 531 SUPERFAMILY SSF53067 2 173 3.56E-22 T 11-10-2018 syc1393_c 116dba2eb3e471326cc259feec1f1a36 531 Gene3D G3DSA:3.90.640.10 237 312 1.0E-55 T 11-10-2018 syc1393_c 116dba2eb3e471326cc259feec1f1a36 531 PRINTS PR00301 70kDa heat shock protein signature 1 14 2.4E-10 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 syc1393_c 116dba2eb3e471326cc259feec1f1a36 531 PRINTS PR00301 70kDa heat shock protein signature 494 510 2.4E-10 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 syc1393_c 116dba2eb3e471326cc259feec1f1a36 531 PRINTS PR00301 70kDa heat shock protein signature 365 385 2.4E-10 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 syc1393_c 116dba2eb3e471326cc259feec1f1a36 531 PRINTS PR00301 70kDa heat shock protein signature 184 194 2.4E-10 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 syc1393_c 116dba2eb3e471326cc259feec1f1a36 531 PRINTS PR00301 70kDa heat shock protein signature 334 350 2.4E-10 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 syc1393_c 116dba2eb3e471326cc259feec1f1a36 531 Gene3D G3DSA:3.30.420.40 173 365 1.0E-55 T 11-10-2018 syc1393_c 116dba2eb3e471326cc259feec1f1a36 531 SUPERFAMILY SSF53067 169 387 1.56E-33 T 11-10-2018 syc1393_c 116dba2eb3e471326cc259feec1f1a36 531 Pfam PF00012 Hsp70 protein 152 202 3.1E-10 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 syc1393_c 116dba2eb3e471326cc259feec1f1a36 531 Pfam PF00012 Hsp70 protein 234 379 7.7E-15 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 syc0953_d 36e391f3ece2f8bca97c05bb28b6b78b 311 SUPERFAMILY SSF88946 16 148 9.1E-49 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 syc0953_d 36e391f3ece2f8bca97c05bb28b6b78b 311 PRINTS PR00046 Major sigma-70 factor signature 251 263 1.5E-27 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 syc0953_d 36e391f3ece2f8bca97c05bb28b6b78b 311 PRINTS PR00046 Major sigma-70 factor signature 126 134 1.5E-27 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 syc0953_d 36e391f3ece2f8bca97c05bb28b6b78b 311 PRINTS PR00046 Major sigma-70 factor signature 102 115 1.5E-27 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 syc0953_d 36e391f3ece2f8bca97c05bb28b6b78b 311 PRINTS PR00046 Major sigma-70 factor signature 272 287 1.5E-27 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 syc0953_d 36e391f3ece2f8bca97c05bb28b6b78b 311 PRINTS PR00046 Major sigma-70 factor signature 287 298 1.5E-27 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 syc0953_d 36e391f3ece2f8bca97c05bb28b6b78b 311 Gene3D G3DSA:1.10.601.10 47 150 1.4E-45 T 11-10-2018 syc0953_d 36e391f3ece2f8bca97c05bb28b6b78b 311 Gene3D G3DSA:1.10.10.10 230 305 1.1E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily syc0953_d 36e391f3ece2f8bca97c05bb28b6b78b 311 Pfam PF04542 Sigma-70 region 2 79 147 6.6E-20 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 syc0953_d 36e391f3ece2f8bca97c05bb28b6b78b 311 Pfam PF04539 Sigma-70 region 3 157 234 7.1E-16 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 syc0953_d 36e391f3ece2f8bca97c05bb28b6b78b 311 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 102 115 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 syc0953_d 36e391f3ece2f8bca97c05bb28b6b78b 311 TIGRFAM TIGR02997 Sig70-cyanoRpoD: RNA polymerase sigma factor, cyanobacterial RpoD-like family 19 299 9.0E-120 T 11-10-2018 IPR017848 RNA polymerase sigma factor, RpoD-like, cyanobacteria syc0953_d 36e391f3ece2f8bca97c05bb28b6b78b 311 Pfam PF00140 Sigma-70 factor, region 1.2 19 49 5.0E-13 T 11-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 syc0953_d 36e391f3ece2f8bca97c05bb28b6b78b 311 SUPERFAMILY SSF88659 212 303 6.17E-27 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like syc0953_d 36e391f3ece2f8bca97c05bb28b6b78b 311 Gene3D G3DSA:1.10.10.10 151 227 3.5E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily syc0953_d 36e391f3ece2f8bca97c05bb28b6b78b 311 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 272 298 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 syc0953_d 36e391f3ece2f8bca97c05bb28b6b78b 311 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 75 300 2.1E-38 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 syc0953_d 36e391f3ece2f8bca97c05bb28b6b78b 311 Pfam PF04545 Sigma-70, region 4 247 299 7.9E-21 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 syc0953_d 36e391f3ece2f8bca97c05bb28b6b78b 311 SUPERFAMILY SSF88659 151 225 1.05E-15 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like syc2281_d 023da97850243f8595802e5e7d3c5f3e 638 Gene3D G3DSA:3.30.565.10 4 216 5.6E-60 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily syc2281_d 023da97850243f8595802e5e7d3c5f3e 638 Gene3D G3DSA:1.20.120.790 493 637 1.2E-5 T 11-10-2018 IPR037196 HSP90, C-terminal domain syc2281_d 023da97850243f8595802e5e7d3c5f3e 638 SMART SM00387 27 180 9.3E-9 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase syc2281_d 023da97850243f8595802e5e7d3c5f3e 638 SUPERFAMILY SSF110942 504 631 1.29E-7 T 11-10-2018 IPR037196 HSP90, C-terminal domain syc2281_d 023da97850243f8595802e5e7d3c5f3e 638 SUPERFAMILY SSF55874 4 211 4.32E-60 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily syc2281_d 023da97850243f8595802e5e7d3c5f3e 638 Gene3D G3DSA:3.30.230.80 217 345 5.2E-32 T 11-10-2018 syc2281_d 023da97850243f8595802e5e7d3c5f3e 638 Pfam PF00183 Hsp90 protein 207 632 1.4E-57 T 11-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 syc2281_d 023da97850243f8595802e5e7d3c5f3e 638 SUPERFAMILY SSF54211 213 476 1.52E-74 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold syc2281_d 023da97850243f8595802e5e7d3c5f3e 638 PRINTS PR00775 90kDa heat shock protein signature 26 48 3.7E-36 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal syc2281_d 023da97850243f8595802e5e7d3c5f3e 638 PRINTS PR00775 90kDa heat shock protein signature 74 91 3.7E-36 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal syc2281_d 023da97850243f8595802e5e7d3c5f3e 638 PRINTS PR00775 90kDa heat shock protein signature 168 185 3.7E-36 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal syc2281_d 023da97850243f8595802e5e7d3c5f3e 638 PRINTS PR00775 90kDa heat shock protein signature 186 204 3.7E-36 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal syc2281_d 023da97850243f8595802e5e7d3c5f3e 638 PRINTS PR00775 90kDa heat shock protein signature 117 139 3.7E-36 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal syc2281_d 023da97850243f8595802e5e7d3c5f3e 638 PRINTS PR00775 90kDa heat shock protein signature 92 109 3.7E-36 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal syc2281_d 023da97850243f8595802e5e7d3c5f3e 638 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 29 143 6.6E-11 T 11-10-2018 syc2281_d 023da97850243f8595802e5e7d3c5f3e 638 PIRSF PIRSF002583 2 637 2.8E-168 T 11-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 syc2281_d 023da97850243f8595802e5e7d3c5f3e 638 Gene3D G3DSA:3.40.50.12450 348 474 1.5E-25 T 11-10-2018 syc2197_d f2108f9d297c15193f423ba46be13b63 468 Gene3D G3DSA:3.30.499.20 13 287 3.2E-90 T 11-10-2018 syc2197_d f2108f9d297c15193f423ba46be13b63 468 ProSitePatterns PS01244 Aconitase family signature 2. 399 412 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 syc2197_d f2108f9d297c15193f423ba46be13b63 468 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 5 465 1.7E-193 T 11-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 syc2197_d f2108f9d297c15193f423ba46be13b63 468 PRINTS PR00415 Aconitase family signature 343 354 8.3E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 syc2197_d f2108f9d297c15193f423ba46be13b63 468 PRINTS PR00415 Aconitase family signature 399 412 8.3E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 syc2197_d f2108f9d297c15193f423ba46be13b63 468 PRINTS PR00415 Aconitase family signature 83 96 8.3E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 syc2197_d f2108f9d297c15193f423ba46be13b63 468 PRINTS PR00415 Aconitase family signature 120 133 8.3E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 syc2197_d f2108f9d297c15193f423ba46be13b63 468 PRINTS PR00415 Aconitase family signature 109 117 8.3E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 syc2197_d f2108f9d297c15193f423ba46be13b63 468 PRINTS PR00415 Aconitase family signature 287 301 8.3E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 syc2197_d f2108f9d297c15193f423ba46be13b63 468 PRINTS PR00415 Aconitase family signature 196 209 8.3E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 syc2197_d f2108f9d297c15193f423ba46be13b63 468 PRINTS PR00415 Aconitase family signature 134 149 8.3E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 syc2197_d f2108f9d297c15193f423ba46be13b63 468 PRINTS PR00415 Aconitase family signature 210 223 8.3E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 syc2197_d f2108f9d297c15193f423ba46be13b63 468 Pfam PF00330 Aconitase family (aconitate hydratase) 8 458 2.4E-150 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 syc2197_d f2108f9d297c15193f423ba46be13b63 468 SUPERFAMILY SSF53732 3 466 6.67E-157 T 11-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 syc2197_d f2108f9d297c15193f423ba46be13b63 468 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 2 467 56.322 T 11-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 syc2197_d f2108f9d297c15193f423ba46be13b63 468 Gene3D G3DSA:3.30.499.10 321 466 9.9E-49 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 syc2197_d f2108f9d297c15193f423ba46be13b63 468 ProSitePatterns PS00450 Aconitase family signature 1. 339 355 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 syc1161_d 781a3ef820fd925d4cd5b1b5b436c997 202 Pfam PF01641 SelR domain 79 197 6.7E-44 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 syc1161_d 781a3ef820fd925d4cd5b1b5b436c997 202 SUPERFAMILY SSF51316 74 200 1.15E-50 T 11-10-2018 IPR011057 Mss4-like superfamily syc1161_d 781a3ef820fd925d4cd5b1b5b436c997 202 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 75 200 4.5E-43 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 syc1161_d 781a3ef820fd925d4cd5b1b5b436c997 202 Gene3D G3DSA:2.170.150.20 59 201 1.8E-52 T 11-10-2018 syc1686_c cb78cb7d0628e03190767ad57a3c42b2 244 SUPERFAMILY SSF51161 3 169 1.07E-54 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily syc1686_c cb78cb7d0628e03190767ad57a3c42b2 244 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 126 154 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 syc1686_c cb78cb7d0628e03190767ad57a3c42b2 244 Gene3D G3DSA:1.10.3130.10 1 66 2.5E-25 T 11-10-2018 syc1686_c cb78cb7d0628e03190767ad57a3c42b2 244 Gene3D G3DSA:2.160.10.10 67 181 1.3E-35 T 11-10-2018 syc1686_c cb78cb7d0628e03190767ad57a3c42b2 244 PIRSF PIRSF000441 1 222 1.6E-83 T 11-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 syc1686_c cb78cb7d0628e03190767ad57a3c42b2 244 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 118 151 2.0E-8 T 11-10-2018 IPR001451 Hexapeptide repeat syc1686_c cb78cb7d0628e03190767ad57a3c42b2 244 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 72 108 9.1E-4 T 11-10-2018 IPR001451 Hexapeptide repeat syc1686_c cb78cb7d0628e03190767ad57a3c42b2 244 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 6 166 7.8E-77 T 11-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 syc1686_c cb78cb7d0628e03190767ad57a3c42b2 244 Pfam PF06426 Serine acetyltransferase, N-terminal 3 35 2.8E-4 T 11-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 syc0456_d 1a9097faedff7e3cc4768d3f273708de 378 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 1 375 6.4E-108 T 11-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 syc0456_d 1a9097faedff7e3cc4768d3f273708de 378 SUPERFAMILY SSF53067 67 349 2.59E-12 T 11-10-2018 syc0456_d 1a9097faedff7e3cc4768d3f273708de 378 Gene3D G3DSA:3.30.420.40 144 337 5.9E-116 T 11-10-2018 syc0456_d 1a9097faedff7e3cc4768d3f273708de 378 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 1 377 38.542 T 11-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 syc0456_d 1a9097faedff7e3cc4768d3f273708de 378 Gene3D G3DSA:3.30.420.40 8 372 5.9E-116 T 11-10-2018 syc1896_d d9d3f78927858a62f498732b85bb21ce 406 TIGRFAM TIGR00492 alr: alanine racemase 26 393 5.2E-121 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 syc1896_d d9d3f78927858a62f498732b85bb21ce 406 SMART SM01005 265 393 9.5E-69 T 11-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 syc1896_d d9d3f78927858a62f498732b85bb21ce 406 Pfam PF00842 Alanine racemase, C-terminal domain 265 391 1.4E-45 T 11-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 syc1896_d d9d3f78927858a62f498732b85bb21ce 406 Gene3D G3DSA:2.40.37.10 28 391 2.3E-126 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 syc1896_d d9d3f78927858a62f498732b85bb21ce 406 Hamap MF_01201 Alanine racemase. 24 393 33.465 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 syc1896_d d9d3f78927858a62f498732b85bb21ce 406 SUPERFAMILY SSF50621 259 393 9.77E-49 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 syc1896_d d9d3f78927858a62f498732b85bb21ce 406 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 55 65 - T 11-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 syc1896_d d9d3f78927858a62f498732b85bb21ce 406 PRINTS PR00992 Alanine racemase signature 182 193 2.4E-65 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 syc1896_d d9d3f78927858a62f498732b85bb21ce 406 PRINTS PR00992 Alanine racemase signature 225 252 2.4E-65 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 syc1896_d d9d3f78927858a62f498732b85bb21ce 406 PRINTS PR00992 Alanine racemase signature 319 336 2.4E-65 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 syc1896_d d9d3f78927858a62f498732b85bb21ce 406 PRINTS PR00992 Alanine racemase signature 281 296 2.4E-65 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 syc1896_d d9d3f78927858a62f498732b85bb21ce 406 PRINTS PR00992 Alanine racemase signature 375 388 2.4E-65 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 syc1896_d d9d3f78927858a62f498732b85bb21ce 406 PRINTS PR00992 Alanine racemase signature 50 66 2.4E-65 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 syc1896_d d9d3f78927858a62f498732b85bb21ce 406 PRINTS PR00992 Alanine racemase signature 298 313 2.4E-65 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 syc1896_d d9d3f78927858a62f498732b85bb21ce 406 PRINTS PR00992 Alanine racemase signature 86 104 2.4E-65 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 syc1896_d d9d3f78927858a62f498732b85bb21ce 406 PRINTS PR00992 Alanine racemase signature 148 160 2.4E-65 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 syc1896_d d9d3f78927858a62f498732b85bb21ce 406 Pfam PF01168 Alanine racemase, N-terminal domain 31 252 3.7E-71 T 11-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 syc1896_d d9d3f78927858a62f498732b85bb21ce 406 SUPERFAMILY SSF51419 31 266 4.22E-67 T 11-10-2018 IPR029066 PLP-binding barrel syc1896_d d9d3f78927858a62f498732b85bb21ce 406 Gene3D G3DSA:3.20.20.10 33 248 2.3E-126 T 11-10-2018 IPR029066 PLP-binding barrel syc1111_c 6442a23d49666d46adf5a8b684c43e4a 332 Gene3D G3DSA:1.10.8.60 133 198 7.0E-8 T 11-10-2018 syc1111_c 6442a23d49666d46adf5a8b684c43e4a 332 SUPERFAMILY SSF52540 1 197 9.03E-11 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc1111_c 6442a23d49666d46adf5a8b684c43e4a 332 Pfam PF06144 DNA polymerase III, delta subunit 4 178 2.1E-33 T 11-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 syc1111_c 6442a23d49666d46adf5a8b684c43e4a 332 SUPERFAMILY SSF48019 201 327 9.35E-24 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 syc1111_c 6442a23d49666d46adf5a8b684c43e4a 332 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 1 308 3.2E-55 T 11-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 syc1111_c 6442a23d49666d46adf5a8b684c43e4a 332 Gene3D G3DSA:3.40.50.300 1 123 2.1E-19 T 11-10-2018 syc1111_c 6442a23d49666d46adf5a8b684c43e4a 332 Gene3D G3DSA:1.20.272.10 201 326 5.4E-18 T 11-10-2018 syc1713_c 4e351f7ee3c3c341d2fbcf490b2c35b5 486 Pfam PF13476 AAA domain 27 61 4.1E-7 T 11-10-2018 IPR038729 Rad50/SbcC-type AAA domain syc1713_c 4e351f7ee3c3c341d2fbcf490b2c35b5 486 SUPERFAMILY SSF52540 25 288 6.82E-17 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc1713_c 4e351f7ee3c3c341d2fbcf490b2c35b5 486 Pfam PF13175 AAA ATPase domain 164 284 7.2E-17 T 11-10-2018 syc1713_c 4e351f7ee3c3c341d2fbcf490b2c35b5 486 Gene3D G3DSA:3.40.50.300 151 304 1.3E-7 T 11-10-2018 syc1713_c 4e351f7ee3c3c341d2fbcf490b2c35b5 486 Gene3D G3DSA:3.40.50.300 24 136 2.5E-7 T 11-10-2018 syc0275_d 2b86b49f7584bb5aeceba13a2a7a27e5 116 Pfam PF00453 Ribosomal protein L20 3 109 1.8E-44 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc0275_d 2b86b49f7584bb5aeceba13a2a7a27e5 116 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 111 2.7E-47 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc0275_d 2b86b49f7584bb5aeceba13a2a7a27e5 116 PRINTS PR00062 Ribosomal protein L20 signature 75 101 2.4E-41 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc0275_d 2b86b49f7584bb5aeceba13a2a7a27e5 116 PRINTS PR00062 Ribosomal protein L20 signature 42 71 2.4E-41 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc0275_d 2b86b49f7584bb5aeceba13a2a7a27e5 116 PRINTS PR00062 Ribosomal protein L20 signature 12 41 2.4E-41 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc0275_d 2b86b49f7584bb5aeceba13a2a7a27e5 116 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 20 47 4.0E-9 T 11-10-2018 syc0275_d 2b86b49f7584bb5aeceba13a2a7a27e5 116 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc0275_d 2b86b49f7584bb5aeceba13a2a7a27e5 116 SUPERFAMILY SSF74731 3 115 2.49E-47 T 11-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc0275_d 2b86b49f7584bb5aeceba13a2a7a27e5 116 Gene3D G3DSA:1.10.720.90 2 55 8.8E-23 T 11-10-2018 syc0275_d 2b86b49f7584bb5aeceba13a2a7a27e5 116 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 30.431 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc0275_d 2b86b49f7584bb5aeceba13a2a7a27e5 116 Gene3D G3DSA:1.10.1900.20 56 116 2.0E-27 T 11-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc0891_d 94fb9a32e753f86dd0ad8806e487b5f5 141 Pfam PF00298 Ribosomal protein L11, RNA binding domain 71 139 4.8E-24 T 11-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 syc0891_d 94fb9a32e753f86dd0ad8806e487b5f5 141 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 73 2.0E-16 T 11-10-2018 syc0891_d 94fb9a32e753f86dd0ad8806e487b5f5 141 Gene3D G3DSA:3.30.1550.10 2 71 2.4E-33 T 11-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily syc0891_d 94fb9a32e753f86dd0ad8806e487b5f5 141 SUPERFAMILY SSF54747 3 72 1.57E-29 T 11-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily syc0891_d 94fb9a32e753f86dd0ad8806e487b5f5 141 ProSitePatterns PS00359 Ribosomal protein L11 signature. 126 141 - T 11-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc0891_d 94fb9a32e753f86dd0ad8806e487b5f5 141 Gene3D G3DSA:1.10.10.250 72 140 7.5E-29 T 11-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily syc0891_d 94fb9a32e753f86dd0ad8806e487b5f5 141 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 66 5.4E-29 T 11-10-2018 IPR020784 Ribosomal protein L11, N-terminal syc0891_d 94fb9a32e753f86dd0ad8806e487b5f5 141 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 140 1.7E-63 T 11-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc0891_d 94fb9a32e753f86dd0ad8806e487b5f5 141 SUPERFAMILY SSF46906 67 139 1.44E-26 T 11-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily syc0891_d 94fb9a32e753f86dd0ad8806e487b5f5 141 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 141 31.014 T 11-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 syc0891_d 94fb9a32e753f86dd0ad8806e487b5f5 141 SMART SM00649 9 140 1.9E-83 T 11-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 syc1065_c fa67c4b8341935e461217f97e0343e6d 408 SMART SM00387 283 403 9.9E-25 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase syc1065_c fa67c4b8341935e461217f97e0343e6d 408 Pfam PF00512 His Kinase A (phospho-acceptor) domain 167 220 2.0E-8 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 syc1065_c fa67c4b8341935e461217f97e0343e6d 408 Gene3D G3DSA:1.10.287.130 167 221 4.9E-8 T 11-10-2018 syc1065_c fa67c4b8341935e461217f97e0343e6d 408 Gene3D G3DSA:3.30.565.10 245 405 4.3E-25 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily syc1065_c fa67c4b8341935e461217f97e0343e6d 408 PRINTS PR00344 Bacterial sensor protein C-terminal signature 321 335 4.4E-5 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 syc1065_c fa67c4b8341935e461217f97e0343e6d 408 PRINTS PR00344 Bacterial sensor protein C-terminal signature 355 373 4.4E-5 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 syc1065_c fa67c4b8341935e461217f97e0343e6d 408 SUPERFAMILY SSF47384 160 217 1.02E-6 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 syc1065_c fa67c4b8341935e461217f97e0343e6d 408 SUPERFAMILY SSF55874 245 403 2.49E-25 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily syc1065_c fa67c4b8341935e461217f97e0343e6d 408 SMART SM00388 160 226 5.9E-6 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 syc1065_c fa67c4b8341935e461217f97e0343e6d 408 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 287 400 3.4E-15 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase syc2014_d 11cf670afb4d43da646691e77acefa81 340 PRINTS PR00471 Acetate kinase family signature 314 326 3.0E-27 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 syc2014_d 11cf670afb4d43da646691e77acefa81 340 PRINTS PR00471 Acetate kinase family signature 239 252 3.0E-27 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 syc2014_d 11cf670afb4d43da646691e77acefa81 340 PRINTS PR00471 Acetate kinase family signature 261 277 3.0E-27 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 syc2014_d 11cf670afb4d43da646691e77acefa81 340 PRINTS PR00471 Acetate kinase family signature 112 125 3.0E-27 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 syc2014_d 11cf670afb4d43da646691e77acefa81 340 PRINTS PR00471 Acetate kinase family signature 142 163 3.0E-27 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 syc2014_d 11cf670afb4d43da646691e77acefa81 340 TIGRFAM TIGR00016 ackA: acetate kinase 20 329 1.1E-102 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 syc2014_d 11cf670afb4d43da646691e77acefa81 340 Gene3D G3DSA:3.30.420.40 135 338 1.2E-66 T 11-10-2018 syc2014_d 11cf670afb4d43da646691e77acefa81 340 Hamap MF_00020 Acetate kinase [ackA]. 1 336 126.418 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 syc2014_d 11cf670afb4d43da646691e77acefa81 340 SUPERFAMILY SSF53067 8 134 1.28E-38 T 11-10-2018 syc2014_d 11cf670afb4d43da646691e77acefa81 340 SUPERFAMILY SSF53067 98 333 7.99E-72 T 11-10-2018 syc2014_d 11cf670afb4d43da646691e77acefa81 340 Gene3D G3DSA:3.30.420.40 5 133 4.4E-42 T 11-10-2018 syc2014_d 11cf670afb4d43da646691e77acefa81 340 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 142 159 - T 11-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 syc2014_d 11cf670afb4d43da646691e77acefa81 340 Pfam PF00871 Acetokinase family 18 327 1.9E-103 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 syc1307_d 99793b41720f8c606ad4ea4c685de66e 154 Pfam PF11320 Protein of unknown function (DUF3122) 23 150 2.4E-33 T 11-10-2018 IPR021469 Protein of unknown function DUF3122 syc0951_d 6092d95e109d66df66186046c49a76f7 457 Pfam PF13347 MFS/sugar transport protein 12 440 3.4E-104 T 11-10-2018 syc0951_d 6092d95e109d66df66186046c49a76f7 457 Gene3D G3DSA:1.20.1250.20 10 207 1.3E-17 T 11-10-2018 syc0951_d 6092d95e109d66df66186046c49a76f7 457 Gene3D G3DSA:1.20.1250.20 230 434 5.9E-11 T 11-10-2018 syc0951_d 6092d95e109d66df66186046c49a76f7 457 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 10 453 1.1E-89 T 11-10-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 syc0951_d 6092d95e109d66df66186046c49a76f7 457 SUPERFAMILY SSF103473 11 439 1.13E-36 T 11-10-2018 IPR036259 MFS transporter superfamily syc2046_c 75da2128eb1eb6bfa26e2bc99be6955e 953 SUPERFAMILY SSF53383 467 945 9.94E-97 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase syc2046_c 75da2128eb1eb6bfa26e2bc99be6955e 953 Gene3D G3DSA:3.40.640.10 90 348 9.3E-107 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 syc2046_c 75da2128eb1eb6bfa26e2bc99be6955e 953 Gene3D G3DSA:3.40.640.10 515 740 1.6E-62 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 syc2046_c 75da2128eb1eb6bfa26e2bc99be6955e 953 Pfam PF02347 Glycine cleavage system P-protein 10 433 2.2E-184 T 11-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 syc2046_c 75da2128eb1eb6bfa26e2bc99be6955e 953 Pfam PF02347 Glycine cleavage system P-protein 469 725 1.9E-8 T 11-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 syc2046_c 75da2128eb1eb6bfa26e2bc99be6955e 953 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 11 944 0.0 T 11-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 syc2046_c 75da2128eb1eb6bfa26e2bc99be6955e 953 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 2 950 25.273 T 11-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 syc2046_c 75da2128eb1eb6bfa26e2bc99be6955e 953 SUPERFAMILY SSF53383 11 435 1.27E-102 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase syc2046_c 75da2128eb1eb6bfa26e2bc99be6955e 953 Gene3D G3DSA:3.90.1150.10 758 896 3.5E-40 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 syc2466_c 454f64810d9c3133c6c3c1d5070c2a42 184 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 114 120 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 syc2466_c 454f64810d9c3133c6c3c1d5070c2a42 184 PIRSF PIRSF004553 1 180 5.0E-53 T 11-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 syc2466_c 454f64810d9c3133c6c3c1d5070c2a42 184 Gene3D G3DSA:3.40.50.150 5 179 1.5E-48 T 11-10-2018 syc2466_c 454f64810d9c3133c6c3c1d5070c2a42 184 Pfam PF03602 Conserved hypothetical protein 95 7 176 3.9E-43 T 11-10-2018 syc2466_c 454f64810d9c3133c6c3c1d5070c2a42 184 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 5 175 7.3E-44 T 11-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 syc2466_c 454f64810d9c3133c6c3c1d5070c2a42 184 SUPERFAMILY SSF53335 8 175 1.37E-39 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase syc1422_c a659d1aa0ba2379b0043a129a78371dd 593 SUPERFAMILY SSF90123 27 342 1.83E-73 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 syc1422_c a659d1aa0ba2379b0043a129a78371dd 593 Pfam PF00664 ABC transporter transmembrane region 41 307 5.8E-44 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 syc1422_c a659d1aa0ba2379b0043a129a78371dd 593 Pfam PF00005 ABC transporter 371 520 1.2E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 syc1422_c a659d1aa0ba2379b0043a129a78371dd 593 Gene3D G3DSA:1.20.1560.10 10 340 3.6E-76 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 syc1422_c a659d1aa0ba2379b0043a129a78371dd 593 Gene3D G3DSA:3.40.50.300 346 593 5.8E-96 T 11-10-2018 syc1422_c a659d1aa0ba2379b0043a129a78371dd 593 ProSitePatterns PS00211 ABC transporters family signature. 492 506 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 syc1422_c a659d1aa0ba2379b0043a129a78371dd 593 SMART SM00382 380 566 2.4E-19 T 11-10-2018 IPR003593 AAA+ ATPase domain syc1422_c a659d1aa0ba2379b0043a129a78371dd 593 SUPERFAMILY SSF52540 343 591 6.48E-96 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc1850_d b051c00ff7c281f844e6ef0b8fc1b2cb 91 Gene3D G3DSA:4.10.520.10 1 91 8.5E-33 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 syc1850_d b051c00ff7c281f844e6ef0b8fc1b2cb 91 SUPERFAMILY SSF47729 1 90 5.59E-31 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 syc1850_d b051c00ff7c281f844e6ef0b8fc1b2cb 91 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 11-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 syc1850_d b051c00ff7c281f844e6ef0b8fc1b2cb 91 SMART SM00411 1 90 4.7E-40 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 syc1850_d b051c00ff7c281f844e6ef0b8fc1b2cb 91 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 6.4E-16 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 syc1850_d b051c00ff7c281f844e6ef0b8fc1b2cb 91 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 6.4E-16 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 syc1850_d b051c00ff7c281f844e6ef0b8fc1b2cb 91 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 6.4E-16 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 syc1850_d b051c00ff7c281f844e6ef0b8fc1b2cb 91 Pfam PF00216 Bacterial DNA-binding protein 1 89 1.3E-30 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 syc0725_c 907a16a094175c66cc655450889f38e2 74 PRINTS PR00354 7Fe ferredoxin signature 41 58 1.2E-5 T 11-10-2018 IPR000813 7Fe ferredoxin GO:0009055 syc0725_c 907a16a094175c66cc655450889f38e2 74 PRINTS PR00354 7Fe ferredoxin signature 18 28 1.2E-5 T 11-10-2018 IPR000813 7Fe ferredoxin GO:0009055 syc0725_c 907a16a094175c66cc655450889f38e2 74 SUPERFAMILY SSF54862 4 69 2.37E-15 T 11-10-2018 syc0725_c 907a16a094175c66cc655450889f38e2 74 Pfam PF12838 4Fe-4S dicluster domain 10 58 2.1E-8 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain syc0725_c 907a16a094175c66cc655450889f38e2 74 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 46 57 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site syc0725_c 907a16a094175c66cc655450889f38e2 74 Gene3D G3DSA:3.30.70.20 3 74 7.3E-15 T 11-10-2018 syc2400_c 6017e9a916398408fc3ebc45f2bcf4e7 199 Pfam PF04143 Sulphur transport 58 173 1.3E-23 T 11-10-2018 IPR007272 Sulphur transport domain syc2023_d f486e928c68ccc06d9323415d16b7e48 362 Gene3D G3DSA:3.40.50.300 103 358 4.5E-98 T 11-10-2018 syc2023_d f486e928c68ccc06d9323415d16b7e48 362 Pfam PF00437 Type II/IV secretion system protein 44 269 4.3E-43 T 11-10-2018 IPR001482 Type II/IV secretion system protein syc2023_d f486e928c68ccc06d9323415d16b7e48 362 Gene3D G3DSA:3.30.450.90 1 102 1.8E-32 T 11-10-2018 syc2023_d f486e928c68ccc06d9323415d16b7e48 362 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 195 209 - T 11-10-2018 IPR001482 Type II/IV secretion system protein syc2023_d f486e928c68ccc06d9323415d16b7e48 362 SUPERFAMILY SSF52540 3 341 3.05E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc2023_d f486e928c68ccc06d9323415d16b7e48 362 SMART SM00382 124 258 2.9E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain syc2023_d f486e928c68ccc06d9323415d16b7e48 362 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 5 350 2.8E-152 T 11-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 syc1925_c cdca4d29165f39d587187a383615941d 152 Gene3D G3DSA:3.30.1490.190 100 152 2.5E-13 T 11-10-2018 syc1925_c cdca4d29165f39d587187a383615941d 152 Gene3D G3DSA:1.10.10.10 15 98 3.0E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily syc1925_c cdca4d29165f39d587187a383615941d 152 Pfam PF01475 Ferric uptake regulator family 24 142 1.1E-25 T 11-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 syc1925_c cdca4d29165f39d587187a383615941d 152 SUPERFAMILY SSF46785 18 148 3.03E-32 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily syc0594_d d847bd6277425b8fd7201d8a89ea8f7e 276 SUPERFAMILY SSF161098 5 276 4.58E-63 T 11-10-2018 IPR035906 MetI-like superfamily syc0594_d d847bd6277425b8fd7201d8a89ea8f7e 276 Gene3D G3DSA:1.10.3720.10 5 266 2.4E-52 T 11-10-2018 IPR035906 MetI-like superfamily syc0594_d d847bd6277425b8fd7201d8a89ea8f7e 276 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 262 8.0E-18 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 syc1834_d 666cc9b4b34a46adcad01aacf8a54cdd 91 SUPERFAMILY SSF46894 10 72 3.74E-22 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 syc1834_d 666cc9b4b34a46adcad01aacf8a54cdd 91 Gene3D G3DSA:1.10.10.10 2 77 1.3E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily syc1834_d 666cc9b4b34a46adcad01aacf8a54cdd 91 Pfam PF00196 Bacterial regulatory proteins, luxR family 13 67 2.2E-19 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 syc1834_d 666cc9b4b34a46adcad01aacf8a54cdd 91 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 43 55 2.7E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 syc1834_d 666cc9b4b34a46adcad01aacf8a54cdd 91 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 13 27 2.7E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 syc1834_d 666cc9b4b34a46adcad01aacf8a54cdd 91 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 27 43 2.7E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 syc1834_d 666cc9b4b34a46adcad01aacf8a54cdd 91 ProSitePatterns PS00622 LuxR-type HTH domain signature. 27 54 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 syc1834_d 666cc9b4b34a46adcad01aacf8a54cdd 91 SMART SM00421 10 67 2.4E-23 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 syc0065_d 0290927405ea58c894cd230ae333c437 474 Pfam PF00483 Nucleotidyl transferase 9 289 7.3E-73 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 syc0065_d 0290927405ea58c894cd230ae333c437 474 Gene3D G3DSA:3.90.550.10 6 349 2.8E-118 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases syc0065_d 0290927405ea58c894cd230ae333c437 474 Gene3D G3DSA:2.60.120.10 350 462 1.2E-19 T 11-10-2018 IPR014710 RmlC-like jelly roll fold syc0065_d 0290927405ea58c894cd230ae333c437 474 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 7 473 8.4E-219 T 11-10-2018 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 syc0065_d 0290927405ea58c894cd230ae333c437 474 SUPERFAMILY SSF53448 6 285 2.94E-71 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases syc0065_d 0290927405ea58c894cd230ae333c437 474 SUPERFAMILY SSF51182 189 473 1.36E-87 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily syc0065_d 0290927405ea58c894cd230ae333c437 474 Pfam PF01050 Mannose-6-phosphate isomerase 319 469 2.8E-70 T 11-10-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 syc2056_d ef8bd3bb6fdf81ec8a349c04de10108a 230 Pfam PF07883 Cupin domain 145 200 1.2E-8 T 11-10-2018 IPR013096 Cupin 2, conserved barrel syc2056_d ef8bd3bb6fdf81ec8a349c04de10108a 230 Pfam PF01381 Helix-turn-helix 29 81 5.2E-15 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 syc2056_d ef8bd3bb6fdf81ec8a349c04de10108a 230 SMART SM00530 28 83 1.7E-15 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 syc2056_d ef8bd3bb6fdf81ec8a349c04de10108a 230 SUPERFAMILY SSF51182 68 213 1.32E-22 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily syc2056_d ef8bd3bb6fdf81ec8a349c04de10108a 230 Gene3D G3DSA:1.10.260.40 17 95 3.5E-19 T 11-10-2018 syc2056_d ef8bd3bb6fdf81ec8a349c04de10108a 230 SUPERFAMILY SSF47413 23 88 3.84E-17 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 syc2056_d ef8bd3bb6fdf81ec8a349c04de10108a 230 Gene3D G3DSA:2.60.120.10 96 203 8.7E-19 T 11-10-2018 IPR014710 RmlC-like jelly roll fold syc0282_c fa4e1d7440c0747e9b0f4a2fbc44908e 465 TIGRFAM TIGR00400 mgtE: magnesium transporter 15 463 5.2E-169 T 11-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 syc0282_c fa4e1d7440c0747e9b0f4a2fbc44908e 465 SMART SM00924 45 148 1.4E-29 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain syc0282_c fa4e1d7440c0747e9b0f4a2fbc44908e 465 Pfam PF01769 Divalent cation transporter 334 455 1.5E-28 T 11-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 syc0282_c fa4e1d7440c0747e9b0f4a2fbc44908e 465 Pfam PF00571 CBS domain 148 206 0.0022 T 11-10-2018 IPR000644 CBS domain syc0282_c fa4e1d7440c0747e9b0f4a2fbc44908e 465 Pfam PF00571 CBS domain 212 266 1.2E-10 T 11-10-2018 IPR000644 CBS domain syc0282_c fa4e1d7440c0747e9b0f4a2fbc44908e 465 Gene3D G3DSA:1.10.357.20 286 462 3.4E-52 T 11-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain syc0282_c fa4e1d7440c0747e9b0f4a2fbc44908e 465 Gene3D G3DSA:1.25.60.10 16 142 9.8E-24 T 11-10-2018 IPR038076 MgtE, N-terminal domain superfamily syc0282_c fa4e1d7440c0747e9b0f4a2fbc44908e 465 SUPERFAMILY SSF54631 147 287 1.39E-33 T 11-10-2018 syc0282_c fa4e1d7440c0747e9b0f4a2fbc44908e 465 SUPERFAMILY SSF158791 20 142 4.58E-25 T 11-10-2018 syc0282_c fa4e1d7440c0747e9b0f4a2fbc44908e 465 SUPERFAMILY SSF161093 291 462 5.89E-47 T 11-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 syc0282_c fa4e1d7440c0747e9b0f4a2fbc44908e 465 Gene3D G3DSA:3.10.580.10 145 272 1.2E-45 T 11-10-2018 syc0282_c fa4e1d7440c0747e9b0f4a2fbc44908e 465 SMART SM00116 219 267 1.4E-10 T 11-10-2018 IPR000644 CBS domain syc0282_c fa4e1d7440c0747e9b0f4a2fbc44908e 465 Pfam PF03448 MgtE intracellular N domain 48 141 6.5E-23 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain syc0590_d 4124d02a03ad8f118ad9dd8e6a5f1e28 263 Gene3D G3DSA:3.90.320.10 69 241 5.3E-7 T 11-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal syc0590_d 4124d02a03ad8f118ad9dd8e6a5f1e28 263 Pfam PF12705 PD-(D/E)XK nuclease superfamily 4 238 1.3E-33 T 11-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type syc0590_d 4124d02a03ad8f118ad9dd8e6a5f1e28 263 SUPERFAMILY SSF52980 4 175 4.08E-8 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 syc2375_d a53853da2c2bb77b183b0a6d0aaba94e 1238 SMART SM00052 979 1225 1.6E-106 T 11-10-2018 IPR001633 EAL domain syc2375_d a53853da2c2bb77b183b0a6d0aaba94e 1238 Gene3D G3DSA:3.30.70.270 807 974 2.7E-53 T 11-10-2018 syc2375_d a53853da2c2bb77b183b0a6d0aaba94e 1238 Pfam PF00563 EAL domain 985 1220 1.5E-72 T 11-10-2018 IPR001633 EAL domain syc2375_d a53853da2c2bb77b183b0a6d0aaba94e 1238 SUPERFAMILY SSF55073 813 970 1.1E-44 T 11-10-2018 IPR029787 Nucleotide cyclase syc2375_d a53853da2c2bb77b183b0a6d0aaba94e 1238 SUPERFAMILY SSF55785 196 296 4.19E-5 T 11-10-2018 IPR035965 PAS domain superfamily syc2375_d a53853da2c2bb77b183b0a6d0aaba94e 1238 Gene3D G3DSA:3.20.20.450 980 1232 2.2E-96 T 11-10-2018 IPR035919 EAL domain superfamily syc2375_d a53853da2c2bb77b183b0a6d0aaba94e 1238 SUPERFAMILY SSF55785 535 670 1.38E-17 T 11-10-2018 IPR035965 PAS domain superfamily syc2375_d a53853da2c2bb77b183b0a6d0aaba94e 1238 SMART SM00086 630 672 2.1E-5 T 11-10-2018 IPR001610 PAC motif syc2375_d a53853da2c2bb77b183b0a6d0aaba94e 1238 SMART SM00086 755 797 4.8E-9 T 11-10-2018 IPR001610 PAC motif syc2375_d a53853da2c2bb77b183b0a6d0aaba94e 1238 Pfam PF08448 PAS fold 440 498 4.3E-7 T 11-10-2018 IPR013656 PAS fold-4 syc2375_d a53853da2c2bb77b183b0a6d0aaba94e 1238 Pfam PF00990 Diguanylate cyclase, GGDEF domain 808 964 1.3E-44 T 11-10-2018 IPR000160 GGDEF domain syc2375_d a53853da2c2bb77b183b0a6d0aaba94e 1238 Gene3D G3DSA:3.30.450.20 430 537 6.5E-16 T 11-10-2018 syc2375_d a53853da2c2bb77b183b0a6d0aaba94e 1238 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 677 804 1.6E-20 T 11-10-2018 IPR000014 PAS domain syc2375_d a53853da2c2bb77b183b0a6d0aaba94e 1238 SMART SM00091 680 749 1.6E-6 T 11-10-2018 IPR000014 PAS domain syc2375_d a53853da2c2bb77b183b0a6d0aaba94e 1238 SMART SM00091 433 499 4.2E-7 T 11-10-2018 IPR000014 PAS domain syc2375_d a53853da2c2bb77b183b0a6d0aaba94e 1238 SMART SM00091 319 387 6.5 T 11-10-2018 IPR000014 PAS domain syc2375_d a53853da2c2bb77b183b0a6d0aaba94e 1238 SMART SM00091 550 623 0.76 T 11-10-2018 IPR000014 PAS domain syc2375_d a53853da2c2bb77b183b0a6d0aaba94e 1238 SMART SM00091 187 255 18.0 T 11-10-2018 IPR000014 PAS domain syc2375_d a53853da2c2bb77b183b0a6d0aaba94e 1238 Gene3D G3DSA:3.30.450.20 543 668 1.4E-23 T 11-10-2018 syc2375_d a53853da2c2bb77b183b0a6d0aaba94e 1238 Gene3D G3DSA:3.30.450.20 187 298 2.8E-11 T 11-10-2018 syc2375_d a53853da2c2bb77b183b0a6d0aaba94e 1238 SUPERFAMILY SSF55785 687 796 3.07E-27 T 11-10-2018 IPR035965 PAS domain superfamily syc2375_d a53853da2c2bb77b183b0a6d0aaba94e 1238 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 806 965 4.4E-39 T 11-10-2018 IPR000160 GGDEF domain syc2375_d a53853da2c2bb77b183b0a6d0aaba94e 1238 SUPERFAMILY SSF141868 984 1232 3.4E-89 T 11-10-2018 IPR035919 EAL domain superfamily syc2375_d a53853da2c2bb77b183b0a6d0aaba94e 1238 Gene3D G3DSA:3.30.450.20 316 429 2.6E-9 T 11-10-2018 syc2375_d a53853da2c2bb77b183b0a6d0aaba94e 1238 Gene3D G3DSA:3.30.450.20 672 806 1.0E-44 T 11-10-2018 syc2375_d a53853da2c2bb77b183b0a6d0aaba94e 1238 SMART SM00267 797 969 8.9E-57 T 11-10-2018 IPR000160 GGDEF domain syc2375_d a53853da2c2bb77b183b0a6d0aaba94e 1238 SUPERFAMILY SSF55785 417 510 2.93E-11 T 11-10-2018 IPR035965 PAS domain superfamily syc2375_d a53853da2c2bb77b183b0a6d0aaba94e 1238 SUPERFAMILY SSF55785 320 419 3.32E-6 T 11-10-2018 IPR035965 PAS domain superfamily syc2375_d a53853da2c2bb77b183b0a6d0aaba94e 1238 Pfam PF13426 PAS domain 692 796 5.7E-21 T 11-10-2018 IPR000014 PAS domain syc2375_d a53853da2c2bb77b183b0a6d0aaba94e 1238 Pfam PF08447 PAS fold 573 665 1.1E-13 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 syc1019_d ea1ec0c034437501f48dec0534890a8d 216 SUPERFAMILY SSF51735 1 202 1.33E-50 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily syc1019_d ea1ec0c034437501f48dec0534890a8d 216 Gene3D G3DSA:3.40.50.720 1 215 1.9E-58 T 11-10-2018 syc1019_d ea1ec0c034437501f48dec0534890a8d 216 Pfam PF13460 NAD(P)H-binding 7 190 7.3E-45 T 11-10-2018 IPR016040 NAD(P)-binding domain syc1584_c e8fd27e09b9e85244484bdd86e783663 240 SUPERFAMILY SSF52096 45 226 2.03E-70 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily syc1584_c e8fd27e09b9e85244484bdd86e783663 240 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 36 226 4.9E-106 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 syc1584_c e8fd27e09b9e85244484bdd86e783663 240 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 37 227 43.889 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 syc1584_c e8fd27e09b9e85244484bdd86e783663 240 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 124 135 - T 11-10-2018 IPR018215 ClpP, Ser active site syc1584_c e8fd27e09b9e85244484bdd86e783663 240 Pfam PF00574 Clp protease 47 226 1.4E-85 T 11-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA syc1584_c e8fd27e09b9e85244484bdd86e783663 240 PRINTS PR00127 Clp protease catalytic subunit P signature 93 113 2.6E-55 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 syc1584_c e8fd27e09b9e85244484bdd86e783663 240 PRINTS PR00127 Clp protease catalytic subunit P signature 202 221 2.6E-55 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 syc1584_c e8fd27e09b9e85244484bdd86e783663 240 PRINTS PR00127 Clp protease catalytic subunit P signature 53 68 2.6E-55 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 syc1584_c e8fd27e09b9e85244484bdd86e783663 240 PRINTS PR00127 Clp protease catalytic subunit P signature 124 141 2.6E-55 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 syc1584_c e8fd27e09b9e85244484bdd86e783663 240 PRINTS PR00127 Clp protease catalytic subunit P signature 145 164 2.6E-55 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 syc1584_c e8fd27e09b9e85244484bdd86e783663 240 Gene3D G3DSA:3.90.226.10 24 231 2.3E-80 T 11-10-2018 syc1584_c e8fd27e09b9e85244484bdd86e783663 240 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 146 159 - T 11-10-2018 IPR033135 ClpP, histidine active site syc1440_d 37308c9485c3271182e7ae7b75de3501 257 SUPERFAMILY SSF53448 1 257 1.96E-69 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases syc1440_d 37308c9485c3271182e7ae7b75de3501 257 TIGRFAM TIGR02623 G1P_cyt_trans: glucose-1-phosphate cytidylyltransferase 1 256 3.7E-149 T 11-10-2018 IPR013446 Glucose-1-phosphate cytidylyltransferase GO:0047343 KEGG: 00500+2.7.7.33|KEGG: 00520+2.7.7.33|MetaCyc: PWY-5833|MetaCyc: PWY-5940 syc1440_d 37308c9485c3271182e7ae7b75de3501 257 Pfam PF00483 Nucleotidyl transferase 2 218 3.2E-19 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 syc1440_d 37308c9485c3271182e7ae7b75de3501 257 Gene3D G3DSA:3.90.550.10 1 257 7.7E-75 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases syc2498_d 3b6948ba906b5c75ef93933520640bbe 402 SUPERFAMILY SSF51735 2 150 1.74E-44 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily syc2498_d 3b6948ba906b5c75ef93933520640bbe 402 SUPERFAMILY SSF55347 126 274 1.31E-58 T 11-10-2018 syc2498_d 3b6948ba906b5c75ef93933520640bbe 402 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 132 2.9E-46 T 11-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 syc2498_d 3b6948ba906b5c75ef93933520640bbe 402 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 239 7.0E-39 T 11-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 syc2498_d 3b6948ba906b5c75ef93933520640bbe 402 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 392 3.1E-166 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 syc2498_d 3b6948ba906b5c75ef93933520640bbe 402 Pfam PF13288 DXP reductoisomerase C-terminal domain 271 389 7.3E-43 T 11-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 syc2498_d 3b6948ba906b5c75ef93933520640bbe 402 Gene3D G3DSA:1.10.1740.10 312 397 1.5E-31 T 11-10-2018 syc2498_d 3b6948ba906b5c75ef93933520640bbe 402 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 394 47.028 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 syc2498_d 3b6948ba906b5c75ef93933520640bbe 402 Gene3D G3DSA:3.40.50.720 1 150 1.8E-51 T 11-10-2018 syc2498_d 3b6948ba906b5c75ef93933520640bbe 402 SUPERFAMILY SSF69055 302 395 4.97E-33 T 11-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 syc2498_d 3b6948ba906b5c75ef93933520640bbe 402 PIRSF PIRSF006205 1 400 8.9E-166 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 syc2502_c 761fbe7afa96b44ec979857bf5c3b23a 457 Gene3D G3DSA:3.30.565.10 293 453 1.9E-14 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily syc2502_c 761fbe7afa96b44ec979857bf5c3b23a 457 Gene3D G3DSA:1.10.287.130 218 275 9.9E-6 T 11-10-2018 syc2502_c 761fbe7afa96b44ec979857bf5c3b23a 457 SUPERFAMILY SSF55874 295 444 9.58E-7 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily syc2502_c 761fbe7afa96b44ec979857bf5c3b23a 457 SMART SM00388 220 283 0.0078 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 syc2502_c 761fbe7afa96b44ec979857bf5c3b23a 457 SUPERFAMILY SSF47384 223 267 5.69E-6 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 syc2169_d 35e9179461fcf8414a27292c144496f4 283 Pfam PF01551 Peptidase family M23 176 274 2.6E-28 T 11-10-2018 IPR016047 Peptidase M23 syc2169_d 35e9179461fcf8414a27292c144496f4 283 SUPERFAMILY SSF51261 145 278 1.99E-43 T 11-10-2018 IPR011055 Duplicated hybrid motif syc2169_d 35e9179461fcf8414a27292c144496f4 283 Gene3D G3DSA:2.70.70.10 128 281 2.7E-42 T 11-10-2018 IPR011055 Duplicated hybrid motif syc0336_c df82e24d5e6a3dcd9acd7785c1a2d738 167 PRINTS PR01011 Glutathione peroxidase family signature 65 81 4.9E-20 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 syc0336_c df82e24d5e6a3dcd9acd7785c1a2d738 167 PRINTS PR01011 Glutathione peroxidase family signature 30 47 4.9E-20 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 syc0336_c df82e24d5e6a3dcd9acd7785c1a2d738 167 PRINTS PR01011 Glutathione peroxidase family signature 127 136 4.9E-20 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 syc0336_c df82e24d5e6a3dcd9acd7785c1a2d738 167 PIRSF PIRSF000303 1 167 1.7E-60 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 syc0336_c df82e24d5e6a3dcd9acd7785c1a2d738 167 Pfam PF00255 Glutathione peroxidase 14 118 9.8E-39 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 syc0336_c df82e24d5e6a3dcd9acd7785c1a2d738 167 ProSitePatterns PS00460 Glutathione peroxidases active site. 32 47 - T 11-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 syc0336_c df82e24d5e6a3dcd9acd7785c1a2d738 167 Gene3D G3DSA:3.40.30.10 3 167 2.8E-59 T 11-10-2018 syc0336_c df82e24d5e6a3dcd9acd7785c1a2d738 167 SUPERFAMILY SSF52833 12 166 6.06E-53 T 11-10-2018 IPR036249 Thioredoxin-like superfamily syc0058_c 0d8015c39a4833385f05f8bd917a93c7 57 PIRSF PIRSF037205 2 53 4.7E-27 T 11-10-2018 IPR017136 Uncharacterised conserved protein UCP037205 syc0058_c 0d8015c39a4833385f05f8bd917a93c7 57 Pfam PF10013 Uncharacterized protein conserved in bacteria (DUF2256) 7 44 1.7E-21 T 11-10-2018 IPR017136 Uncharacterised conserved protein UCP037205 syc0352_d eaf4f456b8fb61a47b230dc8593baab2 479 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 339 1.8E-64 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 syc0352_d eaf4f456b8fb61a47b230dc8593baab2 479 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 271 285 1.3E-65 T 11-10-2018 syc0352_d eaf4f456b8fb61a47b230dc8593baab2 479 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 144 153 1.3E-65 T 11-10-2018 syc0352_d eaf4f456b8fb61a47b230dc8593baab2 479 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 40 55 1.3E-65 T 11-10-2018 syc0352_d eaf4f456b8fb61a47b230dc8593baab2 479 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 319 326 1.3E-65 T 11-10-2018 syc0352_d eaf4f456b8fb61a47b230dc8593baab2 479 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 445 465 1.3E-65 T 11-10-2018 syc0352_d eaf4f456b8fb61a47b230dc8593baab2 479 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 1.3E-65 T 11-10-2018 syc0352_d eaf4f456b8fb61a47b230dc8593baab2 479 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 180 205 1.3E-65 T 11-10-2018 syc0352_d eaf4f456b8fb61a47b230dc8593baab2 479 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 423 438 1.3E-65 T 11-10-2018 syc0352_d eaf4f456b8fb61a47b230dc8593baab2 479 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 354 375 1.3E-65 T 11-10-2018 syc0352_d eaf4f456b8fb61a47b230dc8593baab2 479 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 41 51 - T 11-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 syc0352_d eaf4f456b8fb61a47b230dc8593baab2 479 SUPERFAMILY SSF51905 7 381 8.25E-54 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc0352_d eaf4f456b8fb61a47b230dc8593baab2 479 SUPERFAMILY SSF55424 355 472 1.53E-35 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 syc0352_d eaf4f456b8fb61a47b230dc8593baab2 479 Gene3D G3DSA:3.50.50.60 159 283 6.6E-104 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc0352_d eaf4f456b8fb61a47b230dc8593baab2 479 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 358 470 5.2E-32 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 syc0352_d eaf4f456b8fb61a47b230dc8593baab2 479 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 180 198 2.8E-21 T 11-10-2018 syc0352_d eaf4f456b8fb61a47b230dc8593baab2 479 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 2.8E-21 T 11-10-2018 syc0352_d eaf4f456b8fb61a47b230dc8593baab2 479 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 141 159 2.8E-21 T 11-10-2018 syc0352_d eaf4f456b8fb61a47b230dc8593baab2 479 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 304 326 2.8E-21 T 11-10-2018 syc0352_d eaf4f456b8fb61a47b230dc8593baab2 479 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 270 286 2.8E-21 T 11-10-2018 syc0352_d eaf4f456b8fb61a47b230dc8593baab2 479 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 7 476 1.4E-130 T 11-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 syc0352_d eaf4f456b8fb61a47b230dc8593baab2 479 Gene3D G3DSA:3.50.50.60 7 346 6.6E-104 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc0352_d eaf4f456b8fb61a47b230dc8593baab2 479 PIRSF PIRSF000350 1 475 4.4E-84 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 syc0352_d eaf4f456b8fb61a47b230dc8593baab2 479 Gene3D G3DSA:3.30.390.30 356 478 1.2E-40 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 syc2198_d e11721724a76f20a7ad1866d3e0081f0 296 TIGRFAM TIGR04168 TIGR04168: TIGR04168 family protein 24 288 2.0E-116 T 11-10-2018 IPR027629 Putative protein phosphatase DevT-like syc2198_d e11721724a76f20a7ad1866d3e0081f0 296 SUPERFAMILY SSF56300 3 227 4.53E-21 T 11-10-2018 syc2198_d e11721724a76f20a7ad1866d3e0081f0 296 Pfam PF00149 Calcineurin-like phosphoesterase 4 218 1.1E-11 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 syc2504_c 9b2f0e70469375aa35cd4370677e123b 434 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 5 429 43.235 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 syc2504_c 9b2f0e70469375aa35cd4370677e123b 434 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 34 428 2.9E-169 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 syc2504_c 9b2f0e70469375aa35cd4370677e123b 434 Gene3D G3DSA:3.40.50.1980 235 351 5.1E-131 T 11-10-2018 syc2504_c 9b2f0e70469375aa35cd4370677e123b 434 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 231 263 - T 11-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 syc2504_c 9b2f0e70469375aa35cd4370677e123b 434 SUPERFAMILY SSF53720 32 429 3.92E-82 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 syc2504_c 9b2f0e70469375aa35cd4370677e123b 434 Pfam PF00815 Histidinol dehydrogenase 29 428 5.6E-173 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 syc2504_c 9b2f0e70469375aa35cd4370677e123b 434 PRINTS PR00083 Histidinol dehydrogenase signature 253 272 2.3E-93 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 syc2504_c 9b2f0e70469375aa35cd4370677e123b 434 PRINTS PR00083 Histidinol dehydrogenase signature 137 163 2.3E-93 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 syc2504_c 9b2f0e70469375aa35cd4370677e123b 434 PRINTS PR00083 Histidinol dehydrogenase signature 172 198 2.3E-93 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 syc2504_c 9b2f0e70469375aa35cd4370677e123b 434 PRINTS PR00083 Histidinol dehydrogenase signature 202 227 2.3E-93 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 syc2504_c 9b2f0e70469375aa35cd4370677e123b 434 PRINTS PR00083 Histidinol dehydrogenase signature 322 347 2.3E-93 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 syc2504_c 9b2f0e70469375aa35cd4370677e123b 434 PRINTS PR00083 Histidinol dehydrogenase signature 34 58 2.3E-93 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 syc2504_c 9b2f0e70469375aa35cd4370677e123b 434 PRINTS PR00083 Histidinol dehydrogenase signature 363 381 2.3E-93 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 syc2504_c 9b2f0e70469375aa35cd4370677e123b 434 PRINTS PR00083 Histidinol dehydrogenase signature 231 252 2.3E-93 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 syc2504_c 9b2f0e70469375aa35cd4370677e123b 434 PIRSF PIRSF000099 2 432 7.6E-177 T 11-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 syc2504_c 9b2f0e70469375aa35cd4370677e123b 434 Gene3D G3DSA:3.40.50.1980 32 234 5.1E-131 T 11-10-2018 syc1732_d 6cae1849d71a0bd5572de568f16d0284 344 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 13 117 3.9E-13 T 11-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain syc1732_d 6cae1849d71a0bd5572de568f16d0284 344 Pfam PF13378 Enolase C-terminal domain-like 153 340 6.1E-30 T 11-10-2018 IPR029065 Enolase C-terminal domain-like syc1732_d 6cae1849d71a0bd5572de568f16d0284 344 Gene3D G3DSA:3.20.20.120 114 341 6.9E-52 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily syc1732_d 6cae1849d71a0bd5572de568f16d0284 344 SMART SM00922 139 232 7.1E-7 T 11-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal syc1732_d 6cae1849d71a0bd5572de568f16d0284 344 SUPERFAMILY SSF51604 105 340 1.7E-47 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily syc1732_d 6cae1849d71a0bd5572de568f16d0284 344 SUPERFAMILY SSF54826 3 117 3.05E-25 T 11-10-2018 syc1732_d 6cae1849d71a0bd5572de568f16d0284 344 Gene3D G3DSA:3.30.390.10 2 113 4.5E-21 T 11-10-2018 IPR029017 Enolase-like, N-terminal syc1116_d 335afb2ec35e52499062c49671296f75 250 Gene3D G3DSA:3.60.15.10 24 250 3.2E-30 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like syc1116_d 335afb2ec35e52499062c49671296f75 250 Pfam PF13483 Beta-lactamase superfamily domain 34 198 3.9E-39 T 11-10-2018 syc1116_d 335afb2ec35e52499062c49671296f75 250 SUPERFAMILY SSF56281 34 228 3.85E-10 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like syc2246_d 7a6ad5c42d8c7d61f87554e279427596 354 Gene3D G3DSA:3.30.360.10 137 325 9.7E-136 T 11-10-2018 syc2246_d 7a6ad5c42d8c7d61f87554e279427596 354 SMART SM00859 15 130 2.6E-47 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 syc2246_d 7a6ad5c42d8c7d61f87554e279427596 354 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 148 328 8.1E-48 T 11-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 syc2246_d 7a6ad5c42d8c7d61f87554e279427596 354 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 15 129 8.3E-35 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 syc2246_d 7a6ad5c42d8c7d61f87554e279427596 354 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 15 343 2.5E-125 T 11-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 syc2246_d 7a6ad5c42d8c7d61f87554e279427596 354 SUPERFAMILY SSF51735 14 166 2.05E-48 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily syc2246_d 7a6ad5c42d8c7d61f87554e279427596 354 SUPERFAMILY SSF55347 138 329 5.95E-71 T 11-10-2018 syc2246_d 7a6ad5c42d8c7d61f87554e279427596 354 Gene3D G3DSA:3.40.50.720 16 339 9.7E-136 T 11-10-2018 syc2246_d 7a6ad5c42d8c7d61f87554e279427596 354 PIRSF PIRSF000148 13 347 1.1E-126 T 11-10-2018 syc2246_d 7a6ad5c42d8c7d61f87554e279427596 354 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 13 342 37.269 T 11-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 syc0666_d 9bda31c8dc7961bf717e8f61cc63552c 1019 Gene3D G3DSA:1.20.120.850 775 1002 1.7E-90 T 11-10-2018 syc0666_d 9bda31c8dc7961bf717e8f61cc63552c 1019 SUPERFAMILY SSF52540 510 751 4.97E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0666_d 9bda31c8dc7961bf717e8f61cc63552c 1019 SMART SM00487 527 724 4.8E-28 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain syc0666_d 9bda31c8dc7961bf717e8f61cc63552c 1019 SMART SM00490 867 952 1.4E-19 T 11-10-2018 IPR001650 Helicase, C-terminal syc0666_d 9bda31c8dc7961bf717e8f61cc63552c 1019 Gene3D G3DSA:3.40.50.300 760 966 1.7E-90 T 11-10-2018 syc0666_d 9bda31c8dc7961bf717e8f61cc63552c 1019 SUPERFAMILY SSF52540 754 1016 3.99E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0666_d 9bda31c8dc7961bf717e8f61cc63552c 1019 Pfam PF12419 SNF2 Helicase protein 353 483 1.1E-36 T 11-10-2018 IPR022138 Helicase SWF/SNF-related syc0666_d 9bda31c8dc7961bf717e8f61cc63552c 1019 Gene3D G3DSA:3.40.50.10810 532 752 8.4E-65 T 11-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily syc0666_d 9bda31c8dc7961bf717e8f61cc63552c 1019 Pfam PF00176 SNF2 family N-terminal domain 550 821 7.4E-57 T 11-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 syc0666_d 9bda31c8dc7961bf717e8f61cc63552c 1019 Pfam PF00271 Helicase conserved C-terminal domain 838 952 2.9E-15 T 11-10-2018 IPR001650 Helicase, C-terminal syc0135_c 632fc2833fa12ebee8f1d28ce502eefa 102 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 4 61 8.0E-25 T 11-10-2018 syc0135_c 632fc2833fa12ebee8f1d28ce502eefa 102 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 21 40 - T 11-10-2018 IPR020808 Bacterial microcompartments protein, conserved site syc0135_c 632fc2833fa12ebee8f1d28ce502eefa 102 SMART SM00877 3 81 1.6E-33 T 11-10-2018 IPR000249 Microcompartment protein, bacteria syc0135_c 632fc2833fa12ebee8f1d28ce502eefa 102 Pfam PF00936 BMC domain 4 81 4.1E-29 T 11-10-2018 IPR000249 Microcompartment protein, bacteria syc0135_c 632fc2833fa12ebee8f1d28ce502eefa 102 Gene3D G3DSA:3.30.70.1710 1 102 7.5E-46 T 11-10-2018 syc0135_c 632fc2833fa12ebee8f1d28ce502eefa 102 SUPERFAMILY SSF143414 4 98 1.57E-32 T 11-10-2018 IPR037233 CcmK-like superfamily syc1707_d 4ed32431da33af189c915d3cdfd75408 149 Gene3D G3DSA:3.30.420.140 4 146 1.6E-43 T 11-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 syc1707_d 4ed32431da33af189c915d3cdfd75408 149 SMART SM00732 4 104 1.2E-33 T 11-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 syc1707_d 4ed32431da33af189c915d3cdfd75408 149 SUPERFAMILY SSF53098 5 138 3.95E-41 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily syc1707_d 4ed32431da33af189c915d3cdfd75408 149 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 7 136 6.2E-46 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 syc1707_d 4ed32431da33af189c915d3cdfd75408 149 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 4 139 24.247 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 syc1707_d 4ed32431da33af189c915d3cdfd75408 149 Pfam PF03652 Holliday junction resolvase 6 137 5.2E-41 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 syc1129_d af27024f913347bb55d3c32ce2c60805 457 Pfam PF01494 FAD binding domain 46 77 6.9E-6 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 syc1129_d af27024f913347bb55d3c32ce2c60805 457 TIGRFAM TIGR02023 BchP-ChlP: geranylgeranyl reductase 46 442 2.0E-162 T 11-10-2018 IPR010253 Geranylgeranyl reductase, plant/prokaryotic GO:0015979|GO:0015995|GO:0045550|GO:0055114 KEGG: 00900+1.3.1.83 syc1129_d af27024f913347bb55d3c32ce2c60805 457 TIGRFAM TIGR02032 GG-red-SF: geranylgeranyl reductase family 47 348 2.6E-55 T 11-10-2018 IPR011777 Geranylgeranyl reductase family GO:0016628|GO:0055114 syc1129_d af27024f913347bb55d3c32ce2c60805 457 TIGRFAM TIGR02028 ChlP: geranylgeranyl reductase 45 442 1.0E-218 T 11-10-2018 IPR011774 Geranylgeranyl reductase, plant/cyanobacteria GO:0045550|GO:0051188|GO:0055114 KEGG: 00900+1.3.1.83 syc1129_d af27024f913347bb55d3c32ce2c60805 457 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 46 68 2.9E-12 T 11-10-2018 syc1129_d af27024f913347bb55d3c32ce2c60805 457 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 313 328 2.9E-12 T 11-10-2018 syc1129_d af27024f913347bb55d3c32ce2c60805 457 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 191 206 2.9E-12 T 11-10-2018 syc1129_d af27024f913347bb55d3c32ce2c60805 457 SUPERFAMILY SSF51905 46 403 3.37E-34 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc1129_d af27024f913347bb55d3c32ce2c60805 457 Gene3D G3DSA:3.50.50.60 46 440 1.1E-66 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc0905_c a5493bbca70bdeb2f18bcc68105c055a 211 Pfam PF09335 SNARE associated Golgi protein 30 160 4.6E-24 T 11-10-2018 IPR032816 SNARE associated Golgi protein syc1222_c 728ccc0ecc91fc6034c9badfffb25d45 378 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 95 114 - T 11-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 syc1222_c 728ccc0ecc91fc6034c9badfffb25d45 378 SUPERFAMILY SSF51395 19 374 1.44E-89 T 11-10-2018 syc1222_c 728ccc0ecc91fc6034c9badfffb25d45 378 Gene3D G3DSA:3.20.20.70 1 377 2.3E-115 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 syc1222_c 728ccc0ecc91fc6034c9badfffb25d45 378 Pfam PF01180 Dihydroorotate dehydrogenase 60 359 3.1E-92 T 11-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 syc1222_c 728ccc0ecc91fc6034c9badfffb25d45 378 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 44 374 3.5E-109 T 11-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 syc1222_c 728ccc0ecc91fc6034c9badfffb25d45 378 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 4 355 46.784 T 11-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 syc1222_c 728ccc0ecc91fc6034c9badfffb25d45 378 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 311 331 - T 11-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 syc1446_d 479b2a455cdc1a36bde6549becbf04da 382 Gene3D G3DSA:3.90.550.10 1 189 2.9E-22 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases syc1446_d 479b2a455cdc1a36bde6549becbf04da 382 SUPERFAMILY SSF53448 3 232 2.25E-27 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases syc1446_d 479b2a455cdc1a36bde6549becbf04da 382 Pfam PF00535 Glycosyl transferase family 2 5 131 8.0E-19 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 syc0402_c 4d6077d093a1c59de0a5b0347d649d2d 405 Gene3D G3DSA:3.30.450.40 18 189 2.7E-18 T 11-10-2018 IPR029016 GAF-like domain superfamily syc0402_c 4d6077d093a1c59de0a5b0347d649d2d 405 Pfam PF13487 HD domain 267 327 6.7E-19 T 11-10-2018 syc0402_c 4d6077d093a1c59de0a5b0347d649d2d 405 SMART SM00065 26 193 4.2E-7 T 11-10-2018 IPR003018 GAF domain GO:0005515 syc0402_c 4d6077d093a1c59de0a5b0347d649d2d 405 TIGRFAM TIGR00277 HDIG: HDIG domain 217 304 2.4E-8 T 11-10-2018 IPR006675 HDIG domain syc0402_c 4d6077d093a1c59de0a5b0347d649d2d 405 SUPERFAMILY SSF55781 10 183 1.09E-17 T 11-10-2018 syc0402_c 4d6077d093a1c59de0a5b0347d649d2d 405 Gene3D G3DSA:1.10.3210.10 192 384 5.7E-67 T 11-10-2018 syc0402_c 4d6077d093a1c59de0a5b0347d649d2d 405 SUPERFAMILY SSF109604 189 375 1.28E-40 T 11-10-2018 syc0402_c 4d6077d093a1c59de0a5b0347d649d2d 405 Pfam PF13185 GAF domain 40 183 2.9E-13 T 11-10-2018 IPR003018 GAF domain GO:0005515 syc0402_c 4d6077d093a1c59de0a5b0347d649d2d 405 SMART SM00471 210 345 1.1E-7 T 11-10-2018 IPR003607 HD/PDEase domain syc0221_c b022692553bf935fd3ca19515ce23c69 231 SUPERFAMILY SSF52402 2 218 2.07E-59 T 11-10-2018 syc0221_c b022692553bf935fd3ca19515ce23c69 231 PIRSF PIRSF006293 1 222 1.6E-69 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 syc0221_c b022692553bf935fd3ca19515ce23c69 231 Pfam PF06508 Queuosine biosynthesis protein QueC 3 213 1.1E-68 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 syc0221_c b022692553bf935fd3ca19515ce23c69 231 Gene3D G3DSA:3.40.50.620 2 220 4.1E-68 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold syc0221_c b022692553bf935fd3ca19515ce23c69 231 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 219 53.468 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 syc0221_c b022692553bf935fd3ca19515ce23c69 231 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 206 6.8E-66 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 syc2288_d d067f86b0de485c6c48489ba2ebe5ff1 259 SUPERFAMILY SSF56214 43 131 1.27E-17 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 syc2288_d d067f86b0de485c6c48489ba2ebe5ff1 259 SUPERFAMILY SSF56214 137 250 1.96E-19 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 syc2288_d d067f86b0de485c6c48489ba2ebe5ff1 259 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 138 230 3.7E-11 T 11-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 syc2288_d d067f86b0de485c6c48489ba2ebe5ff1 259 Gene3D G3DSA:3.90.470.20 47 157 1.0E-21 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 syc0872_c e34d4629a63043d5d50ae4e17552e2c2 461 Gene3D G3DSA:1.10.10.670 292 387 1.2E-55 T 11-10-2018 syc0872_c e34d4629a63043d5d50ae4e17552e2c2 461 Hamap MF_01496 Photosystem II CP43 reaction center protein [psbC]. 2 461 64.511 T 11-10-2018 IPR005869 Photosystem II CP43 reaction centre protein GO:0009523|GO:0009772|GO:0015979|GO:0016020|GO:0016168|GO:0045156 syc0872_c e34d4629a63043d5d50ae4e17552e2c2 461 Pfam PF00421 Photosystem II protein 19 458 5.2E-158 T 11-10-2018 IPR000932 Photosystem antenna protein-like GO:0009521|GO:0009767|GO:0016020|GO:0016168|GO:0019684 syc0872_c e34d4629a63043d5d50ae4e17552e2c2 461 SUPERFAMILY SSF161077 17 461 6.28E-201 T 11-10-2018 IPR036001 Photosystem antenna protein-like superfamily GO:0009521|GO:0009767|GO:0016020|GO:0016168|GO:0019684 syc0872_c e34d4629a63043d5d50ae4e17552e2c2 461 TIGRFAM TIGR03041 PS_antenn_a_b: chlorophyll a/b binding light-harvesting protein 23 293 2.1E-101 T 11-10-2018 syc0872_c e34d4629a63043d5d50ae4e17552e2c2 461 TIGRFAM TIGR01153 psbC: photosystem II 44 kDa subunit reaction center protein 21 452 6.4E-266 T 11-10-2018 IPR005869 Photosystem II CP43 reaction centre protein GO:0009523|GO:0009772|GO:0015979|GO:0016020|GO:0016168|GO:0045156 syc0123_c cd8222513bdc4e94b04de2c483e4ebe0 352 SUPERFAMILY SSF55347 155 320 1.13E-53 T 11-10-2018 syc0123_c cd8222513bdc4e94b04de2c483e4ebe0 352 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 164 323 1.5E-24 T 11-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 syc0123_c cd8222513bdc4e94b04de2c483e4ebe0 352 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 9 352 2.3E-131 T 11-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 syc0123_c cd8222513bdc4e94b04de2c483e4ebe0 352 Gene3D G3DSA:3.40.50.720 9 338 5.8E-123 T 11-10-2018 syc0123_c cd8222513bdc4e94b04de2c483e4ebe0 352 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 150 166 - T 11-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 syc0123_c cd8222513bdc4e94b04de2c483e4ebe0 352 SUPERFAMILY SSF51735 7 184 5.12E-47 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily syc0123_c cd8222513bdc4e94b04de2c483e4ebe0 352 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 7 346 42.849 T 11-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 syc0123_c cd8222513bdc4e94b04de2c483e4ebe0 352 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 9 147 2.2E-33 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 syc0123_c cd8222513bdc4e94b04de2c483e4ebe0 352 SMART SM00859 8 147 3.7E-51 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 syc0123_c cd8222513bdc4e94b04de2c483e4ebe0 352 Gene3D G3DSA:3.30.360.10 153 320 5.8E-123 T 11-10-2018 syc1091_d c1bc02680a5397f3621e825f9fea06b9 183 SUPERFAMILY SSF46785 78 150 1.43E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily syc1091_d c1bc02680a5397f3621e825f9fea06b9 183 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 5 155 1.0E-39 T 11-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 syc1091_d c1bc02680a5397f3621e825f9fea06b9 183 Gene3D G3DSA:1.10.10.10 79 172 1.3E-11 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily syc1091_d c1bc02680a5397f3621e825f9fea06b9 183 PIRSF PIRSF019345 1 177 7.1E-42 T 11-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 syc1091_d c1bc02680a5397f3621e825f9fea06b9 183 Gene3D G3DSA:1.10.10.10 2 78 5.3E-10 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily syc1091_d c1bc02680a5397f3621e825f9fea06b9 183 SUPERFAMILY SSF46785 4 79 6.62E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily syc1091_d c1bc02680a5397f3621e825f9fea06b9 183 Pfam PF04079 Segregation and condensation complex subunit ScpB 7 153 1.3E-37 T 11-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 syc0733_c b032cadabb5df941af00885da93e9215 248 Pfam PF13483 Beta-lactamase superfamily domain 2 197 3.0E-35 T 11-10-2018 syc0733_c b032cadabb5df941af00885da93e9215 248 Gene3D G3DSA:3.60.15.10 1 243 1.9E-28 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like syc0733_c b032cadabb5df941af00885da93e9215 248 SUPERFAMILY SSF56281 4 135 9.17E-15 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like syc0885_c 50bd6a598542dc65e529b23316613543 588 SUPERFAMILY SSF90123 15 328 1.83E-71 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 syc0885_c 50bd6a598542dc65e529b23316613543 588 SUPERFAMILY SSF52540 338 582 7.35E-79 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0885_c 50bd6a598542dc65e529b23316613543 588 Gene3D G3DSA:3.40.50.300 335 586 1.9E-82 T 11-10-2018 syc0885_c 50bd6a598542dc65e529b23316613543 588 Pfam PF00005 ABC transporter 361 509 1.0E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 syc0885_c 50bd6a598542dc65e529b23316613543 588 Pfam PF00664 ABC transporter transmembrane region 27 292 4.2E-50 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 syc0885_c 50bd6a598542dc65e529b23316613543 588 Gene3D G3DSA:1.20.1560.10 4 328 6.0E-78 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 syc0885_c 50bd6a598542dc65e529b23316613543 588 SMART SM00382 370 557 1.5E-19 T 11-10-2018 IPR003593 AAA+ ATPase domain syc1047_c 543a332e497d3e3c930dd784a00c7262 276 Gene3D G3DSA:1.10.3720.10 3 266 2.2E-71 T 11-10-2018 IPR035906 MetI-like superfamily syc1047_c 543a332e497d3e3c930dd784a00c7262 276 SUPERFAMILY SSF161098 7 276 2.43E-76 T 11-10-2018 IPR035906 MetI-like superfamily syc1047_c 543a332e497d3e3c930dd784a00c7262 276 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 268 1.1E-20 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 syc2156_d 6316ab9b4bd5a21bdafa84050aac3d2f 353 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 11 339 5.7E-106 T 11-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 syc2156_d 6316ab9b4bd5a21bdafa84050aac3d2f 353 PIRSF PIRSF005508 2 353 3.1E-121 T 11-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 syc2156_d 6316ab9b4bd5a21bdafa84050aac3d2f 353 Pfam PF01758 Sodium Bile acid symporter family 57 250 6.0E-37 T 11-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 syc2156_d 6316ab9b4bd5a21bdafa84050aac3d2f 353 Gene3D G3DSA:1.20.1530.20 10 341 4.7E-21 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily syc2209_c 435d5e8f709b1d7ff266aefc1dc3f0e3 643 Gene3D G3DSA:3.90.1640.30 39 308 3.9E-85 T 11-10-2018 syc2209_c 435d5e8f709b1d7ff266aefc1dc3f0e3 643 Pfam PF02272 DHHA1 domain 308 429 1.8E-18 T 11-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 syc2209_c 435d5e8f709b1d7ff266aefc1dc3f0e3 643 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 10 547 4.6E-145 T 11-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 syc2209_c 435d5e8f709b1d7ff266aefc1dc3f0e3 643 SUPERFAMILY SSF64182 44 435 6.8E-109 T 11-10-2018 IPR038763 DHH phosphoesterase superfamily syc2209_c 435d5e8f709b1d7ff266aefc1dc3f0e3 643 Pfam PF01368 DHH family 65 162 1.1E-8 T 11-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 syc2209_c 435d5e8f709b1d7ff266aefc1dc3f0e3 643 Gene3D G3DSA:3.10.310.30 310 434 5.5E-32 T 11-10-2018 syc2074_d a0507d8f3bac71ce59795fb4eaf9bc23 97 Pfam PF04296 Protein of unknown function (DUF448) 9 80 1.1E-18 T 11-10-2018 IPR007393 Domain of unknown function DUF448 syc2074_d a0507d8f3bac71ce59795fb4eaf9bc23 97 Gene3D G3DSA:3.30.1230.10 4 88 8.5E-13 T 11-10-2018 IPR035931 YlxR-like superfamily syc2074_d a0507d8f3bac71ce59795fb4eaf9bc23 97 SUPERFAMILY SSF64376 8 86 4.32E-19 T 11-10-2018 IPR035931 YlxR-like superfamily syc0201_c d363e80c1ec0996ec6718cbfc5c04ec9 498 Gene3D G3DSA:1.20.1250.20 269 495 6.1E-22 T 11-10-2018 syc0201_c d363e80c1ec0996ec6718cbfc5c04ec9 498 SUPERFAMILY SSF103473 20 485 1.44E-64 T 11-10-2018 IPR036259 MFS transporter superfamily syc0201_c d363e80c1ec0996ec6718cbfc5c04ec9 498 ProSitePatterns PS00216 Sugar transport proteins signature 1. 78 94 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 syc0201_c d363e80c1ec0996ec6718cbfc5c04ec9 498 Pfam PF07690 Major Facilitator Superfamily 30 420 1.7E-52 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 syc0201_c d363e80c1ec0996ec6718cbfc5c04ec9 498 Gene3D G3DSA:1.20.1720.10 30 234 1.4E-38 T 11-10-2018 syc0416_d 6338d84b8aeffd684ecafeb680c78630 714 Gene3D G3DSA:3.40.50.300 478 712 1.9E-71 T 11-10-2018 syc0416_d 6338d84b8aeffd684ecafeb680c78630 714 ProSitePatterns PS00211 ABC transporters family signature. 617 631 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 syc0416_d 6338d84b8aeffd684ecafeb680c78630 714 Pfam PF00005 ABC transporter 496 645 5.2E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 syc0416_d 6338d84b8aeffd684ecafeb680c78630 714 SMART SM00382 505 691 1.1E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain syc0416_d 6338d84b8aeffd684ecafeb680c78630 714 Pfam PF00664 ABC transporter transmembrane region 166 427 6.0E-32 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 syc0416_d 6338d84b8aeffd684ecafeb680c78630 714 SUPERFAMILY SSF52540 470 704 1.95E-69 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0416_d 6338d84b8aeffd684ecafeb680c78630 714 Gene3D G3DSA:1.20.1560.10 149 464 3.8E-51 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 syc0416_d 6338d84b8aeffd684ecafeb680c78630 714 SUPERFAMILY SSF90123 145 462 3.01E-53 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 syc0416_d 6338d84b8aeffd684ecafeb680c78630 714 Pfam PF03412 Peptidase C39 family 3 135 3.2E-36 T 11-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 syc0416_d 6338d84b8aeffd684ecafeb680c78630 714 Gene3D G3DSA:3.90.70.10 1 144 1.9E-41 T 11-10-2018 syc1804_d 7263f5574a385721c3bf0ad956123c68 440 TIGRFAM TIGR03105 gln_synth_III: glutamine synthetase, type III 11 439 4.1E-207 T 11-10-2018 IPR017536 Glutamine synthetase, type III syc1804_d 7263f5574a385721c3bf0ad956123c68 440 SUPERFAMILY SSF54368 7 98 1.96E-20 T 11-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 syc1804_d 7263f5574a385721c3bf0ad956123c68 440 Pfam PF00120 Glutamine synthetase, catalytic domain 103 435 2.7E-103 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 syc1804_d 7263f5574a385721c3bf0ad956123c68 440 SUPERFAMILY SSF55931 103 439 2.35E-101 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 syc1804_d 7263f5574a385721c3bf0ad956123c68 440 SMART SM01230 102 354 3.0E-108 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 syc1804_d 7263f5574a385721c3bf0ad956123c68 440 Gene3D G3DSA:3.30.590.10 105 439 2.0E-104 T 11-10-2018 syc1804_d 7263f5574a385721c3bf0ad956123c68 440 Gene3D G3DSA:3.10.20.70 4 103 8.1E-9 T 11-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 syc1804_d 7263f5574a385721c3bf0ad956123c68 440 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 230 245 - T 11-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 syc2098_c 1966561df5b5cf76d98d59f73078dbc2 195 SUPERFAMILY SSF55781 16 183 3.49E-20 T 11-10-2018 syc2098_c 1966561df5b5cf76d98d59f73078dbc2 195 Pfam PF01590 GAF domain 30 188 9.7E-10 T 11-10-2018 IPR003018 GAF domain GO:0005515 syc2098_c 1966561df5b5cf76d98d59f73078dbc2 195 Gene3D G3DSA:3.30.450.40 11 194 7.2E-29 T 11-10-2018 IPR029016 GAF-like domain superfamily syc2098_c 1966561df5b5cf76d98d59f73078dbc2 195 SMART SM00065 27 192 8.2E-8 T 11-10-2018 IPR003018 GAF domain GO:0005515 syc0857_c c9895dc4f9a3758e5fff30ce39d6236e 326 Pfam PF00140 Sigma-70 factor, region 1.2 16 48 5.2E-15 T 11-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 syc0857_c c9895dc4f9a3758e5fff30ce39d6236e 326 Gene3D G3DSA:1.20.120.1810 12 164 7.5E-51 T 11-10-2018 syc0857_c c9895dc4f9a3758e5fff30ce39d6236e 326 TIGRFAM TIGR02997 Sig70-cyanoRpoD: RNA polymerase sigma factor, cyanobacterial RpoD-like family 16 314 4.7E-133 T 11-10-2018 IPR017848 RNA polymerase sigma factor, RpoD-like, cyanobacteria syc0857_c c9895dc4f9a3758e5fff30ce39d6236e 326 Pfam PF04539 Sigma-70 region 3 174 248 1.1E-28 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 syc0857_c c9895dc4f9a3758e5fff30ce39d6236e 326 Gene3D G3DSA:1.10.10.10 244 325 3.6E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily syc0857_c c9895dc4f9a3758e5fff30ce39d6236e 326 SUPERFAMILY SSF88659 226 317 1.23E-23 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like syc0857_c c9895dc4f9a3758e5fff30ce39d6236e 326 Pfam PF04542 Sigma-70 region 2 95 164 1.3E-21 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 syc0857_c c9895dc4f9a3758e5fff30ce39d6236e 326 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 91 316 1.4E-36 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 syc0857_c c9895dc4f9a3758e5fff30ce39d6236e 326 SUPERFAMILY SSF88659 168 241 4.91E-18 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like syc0857_c c9895dc4f9a3758e5fff30ce39d6236e 326 Gene3D G3DSA:1.10.10.10 168 242 5.0E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily syc0857_c c9895dc4f9a3758e5fff30ce39d6236e 326 PRINTS PR00046 Major sigma-70 factor signature 143 151 2.2E-21 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 syc0857_c c9895dc4f9a3758e5fff30ce39d6236e 326 PRINTS PR00046 Major sigma-70 factor signature 287 302 2.2E-21 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 syc0857_c c9895dc4f9a3758e5fff30ce39d6236e 326 PRINTS PR00046 Major sigma-70 factor signature 266 278 2.2E-21 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 syc0857_c c9895dc4f9a3758e5fff30ce39d6236e 326 PRINTS PR00046 Major sigma-70 factor signature 302 313 2.2E-21 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 syc0857_c c9895dc4f9a3758e5fff30ce39d6236e 326 PRINTS PR00046 Major sigma-70 factor signature 119 132 2.2E-21 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 syc0857_c c9895dc4f9a3758e5fff30ce39d6236e 326 Pfam PF04545 Sigma-70, region 4 262 315 8.0E-18 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 syc0857_c c9895dc4f9a3758e5fff30ce39d6236e 326 SUPERFAMILY SSF88946 13 165 5.36E-56 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 syc0529_d 3db817fd48cf20efad3ccff4680e584a 253 Gene3D G3DSA:3.30.70.980 135 206 1.9E-44 T 11-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 syc0529_d 3db817fd48cf20efad3ccff4680e584a 253 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 240 1.9E-86 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 syc0529_d 3db817fd48cf20efad3ccff4680e584a 253 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 241 31.718 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 syc0529_d 3db817fd48cf20efad3ccff4680e584a 253 Gene3D G3DSA:1.10.10.200 1 79 2.5E-31 T 11-10-2018 IPR017856 Integrase-like, N-terminal syc0529_d 3db817fd48cf20efad3ccff4680e584a 253 SUPERFAMILY SSF75625 3 247 7.32E-81 T 11-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 syc0529_d 3db817fd48cf20efad3ccff4680e584a 253 Gene3D G3DSA:3.30.70.980 87 238 1.9E-44 T 11-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 syc0529_d 3db817fd48cf20efad3ccff4680e584a 253 Pfam PF01709 Transcriptional regulator 5 238 2.6E-81 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 syc1401_d 310780ac5ccebf5ecedc679dc3d10bf7 125 Pfam PF12796 Ankyrin repeats (3 copies) 30 102 7.6E-11 T 11-10-2018 IPR020683 Ankyrin repeat-containing domain syc1401_d 310780ac5ccebf5ecedc679dc3d10bf7 125 SMART SM00248 39 68 0.0024 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 syc1401_d 310780ac5ccebf5ecedc679dc3d10bf7 125 SMART SM00248 72 101 8.4E-4 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 syc1401_d 310780ac5ccebf5ecedc679dc3d10bf7 125 SUPERFAMILY SSF48403 29 116 1.9E-22 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily syc1401_d 310780ac5ccebf5ecedc679dc3d10bf7 125 Gene3D G3DSA:1.25.40.20 2 123 3.0E-25 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily syc1180_c 530549f1cf7d44a70040f6d74ce51d99 158 Pfam PF00430 ATP synthase B/B' CF(0) 25 155 1.0E-25 T 11-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 syc1180_c 530549f1cf7d44a70040f6d74ce51d99 158 Hamap MF_01399 ATP synthase subunit b' [atpG]. 19 156 24.004 T 11-10-2018 IPR034679 ATP synthase, F0 complex, subunit b' GO:0015078|GO:0015986|GO:0045263 syc1180_c 530549f1cf7d44a70040f6d74ce51d99 158 Hamap MF_01398 ATP synthase subunit b [atpF]. 20 157 12.36 T 11-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 syc1869_d 777ae6deeedac9d10afa4843b1e3f011 91 PIRSF PIRSF002144 1 91 1.7E-34 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc1869_d 777ae6deeedac9d10afa4843b1e3f011 91 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 9.3E-27 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc1869_d 777ae6deeedac9d10afa4843b1e3f011 91 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 9.3E-27 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc1869_d 777ae6deeedac9d10afa4843b1e3f011 91 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 9.3E-27 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc1869_d 777ae6deeedac9d10afa4843b1e3f011 91 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 11-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc1869_d 777ae6deeedac9d10afa4843b1e3f011 91 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 26.654 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc1869_d 777ae6deeedac9d10afa4843b1e3f011 91 SUPERFAMILY SSF54570 3 84 1.12E-36 T 11-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc1869_d 777ae6deeedac9d10afa4843b1e3f011 91 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 89 2.9E-48 T 11-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 syc1869_d 777ae6deeedac9d10afa4843b1e3f011 91 Pfam PF00203 Ribosomal protein S19 3 83 1.1E-38 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc1869_d 777ae6deeedac9d10afa4843b1e3f011 91 Gene3D G3DSA:3.30.860.10 1 91 8.9E-44 T 11-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc0440_c 1b9a74ce4e13bd7b860c4286166b11d4 357 TIGRFAM TIGR01140 L_thr_O3P_dcar: threonine-phosphate decarboxylase 6 353 7.6E-102 T 11-10-2018 IPR005860 L-threonine-O-3-phosphate decarboxylase GO:0003824|GO:0009236 KEGG: 00860+4.1.1.81|MetaCyc: PWY-5443 syc0440_c 1b9a74ce4e13bd7b860c4286166b11d4 357 Pfam PF00155 Aminotransferase class I and II 52 352 8.0E-31 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 syc0440_c 1b9a74ce4e13bd7b860c4286166b11d4 357 Gene3D G3DSA:3.40.640.10 36 260 3.5E-96 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 syc0440_c 1b9a74ce4e13bd7b860c4286166b11d4 357 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 212 225 - T 11-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 syc0440_c 1b9a74ce4e13bd7b860c4286166b11d4 357 Gene3D G3DSA:3.90.1150.10 24 352 3.5E-96 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 syc0440_c 1b9a74ce4e13bd7b860c4286166b11d4 357 SUPERFAMILY SSF53383 3 354 1.55E-69 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase syc1198_d a4256a1f772dc26a33356108a6c6ba66 422 PRINTS PR00149 Fumarate lyase superfamily signature 252 268 4.5E-27 T 11-10-2018 IPR000362 Fumarate lyase family syc1198_d a4256a1f772dc26a33356108a6c6ba66 422 PRINTS PR00149 Fumarate lyase superfamily signature 207 234 4.5E-27 T 11-10-2018 IPR000362 Fumarate lyase family syc1198_d a4256a1f772dc26a33356108a6c6ba66 422 PRINTS PR00149 Fumarate lyase superfamily signature 124 142 4.5E-27 T 11-10-2018 IPR000362 Fumarate lyase family syc1198_d a4256a1f772dc26a33356108a6c6ba66 422 PRINTS PR00149 Fumarate lyase superfamily signature 79 97 4.5E-27 T 11-10-2018 IPR000362 Fumarate lyase family syc1198_d a4256a1f772dc26a33356108a6c6ba66 422 Pfam PF00206 Lyase 3 277 7.0E-59 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal syc1198_d a4256a1f772dc26a33356108a6c6ba66 422 Pfam PF10397 Adenylosuccinate lyase C-terminus 341 419 7.0E-24 T 11-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 syc1198_d a4256a1f772dc26a33356108a6c6ba66 422 SUPERFAMILY SSF48557 3 419 5.03E-129 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 syc1198_d a4256a1f772dc26a33356108a6c6ba66 422 Gene3D G3DSA:1.10.40.30 340 422 6.0E-31 T 11-10-2018 syc1198_d a4256a1f772dc26a33356108a6c6ba66 422 Gene3D G3DSA:1.20.200.10 84 338 1.8E-91 T 11-10-2018 syc1198_d a4256a1f772dc26a33356108a6c6ba66 422 Gene3D G3DSA:1.10.275.10 1 83 1.3E-29 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal syc1198_d a4256a1f772dc26a33356108a6c6ba66 422 PRINTS PR00145 Argininosuccinate lyase family signature 78 100 1.1E-11 T 11-10-2018 syc1198_d a4256a1f772dc26a33356108a6c6ba66 422 PRINTS PR00145 Argininosuccinate lyase family signature 207 231 1.1E-11 T 11-10-2018 syc1198_d a4256a1f772dc26a33356108a6c6ba66 422 PRINTS PR00145 Argininosuccinate lyase family signature 252 268 1.1E-11 T 11-10-2018 syc1198_d a4256a1f772dc26a33356108a6c6ba66 422 PRINTS PR00145 Argininosuccinate lyase family signature 119 139 1.1E-11 T 11-10-2018 syc1198_d a4256a1f772dc26a33356108a6c6ba66 422 ProSitePatterns PS00163 Fumarate lyases signature. 252 261 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 syc1198_d a4256a1f772dc26a33356108a6c6ba66 422 SMART SM00998 340 421 2.3E-36 T 11-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 syc1198_d a4256a1f772dc26a33356108a6c6ba66 422 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 1 420 2.5E-165 T 11-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 syc1544_c 959927b0c7297bf89fdba0495705fd37 376 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 192 356 8.2E-29 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 syc1544_c 959927b0c7297bf89fdba0495705fd37 376 SUPERFAMILY SSF50891 188 359 4.24E-29 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily syc1544_c 959927b0c7297bf89fdba0495705fd37 376 Gene3D G3DSA:2.40.100.10 56 373 2.3E-118 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily syc1544_c 959927b0c7297bf89fdba0495705fd37 376 SUPERFAMILY SSF101112 59 169 9.15E-25 T 11-10-2018 IPR023222 PsbQ-like domain superfamily syc1544_c 959927b0c7297bf89fdba0495705fd37 376 Pfam PF05757 Oxygen evolving enhancer protein 3 (PsbQ) 72 153 3.1E-6 T 11-10-2018 IPR008797 Oxygen-evolving enhancer protein 3 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898 syc1544_c 959927b0c7297bf89fdba0495705fd37 376 Gene3D G3DSA:1.20.120.290 67 170 2.3E-118 T 11-10-2018 syc1515_c 92fa1c884de58137d44eb0ad504cd82e 476 SUPERFAMILY SSF54631 233 369 4.8E-26 T 11-10-2018 syc1515_c 92fa1c884de58137d44eb0ad504cd82e 476 Pfam PF00571 CBS domain 322 367 9.8E-4 T 11-10-2018 IPR000644 CBS domain syc1515_c 92fa1c884de58137d44eb0ad504cd82e 476 SUPERFAMILY SSF56176 379 464 1.25E-17 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 syc1515_c 92fa1c884de58137d44eb0ad504cd82e 476 Gene3D G3DSA:3.10.580.10 226 378 5.7E-41 T 11-10-2018 syc1515_c 92fa1c884de58137d44eb0ad504cd82e 476 Pfam PF01595 Domain of unknown function DUF21 32 230 7.5E-41 T 11-10-2018 IPR002550 CNNM, transmembrane domain syc1515_c 92fa1c884de58137d44eb0ad504cd82e 476 Pfam PF03471 Transporter associated domain 382 458 6.3E-16 T 11-10-2018 IPR005170 Transporter-associated domain syc1515_c 92fa1c884de58137d44eb0ad504cd82e 476 SMART SM01091 381 460 1.8E-22 T 11-10-2018 IPR005170 Transporter-associated domain syc1515_c 92fa1c884de58137d44eb0ad504cd82e 476 Gene3D G3DSA:3.30.465.10 379 468 4.0E-18 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 syc0518_d c49cc0028863d38489c5d5758aa40751 318 PRINTS PR00111 Alpha/beta hydrolase fold signature 123 136 2.3E-8 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 syc0518_d c49cc0028863d38489c5d5758aa40751 318 PRINTS PR00111 Alpha/beta hydrolase fold signature 79 94 2.3E-8 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 syc0518_d c49cc0028863d38489c5d5758aa40751 318 PRINTS PR00111 Alpha/beta hydrolase fold signature 137 150 2.3E-8 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 syc0518_d c49cc0028863d38489c5d5758aa40751 318 Pfam PF12697 Alpha/beta hydrolase family 55 304 3.3E-23 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 syc0518_d c49cc0028863d38489c5d5758aa40751 318 PRINTS PR00412 Epoxide hydrolase signature 59 77 1.3E-9 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 syc0518_d c49cc0028863d38489c5d5758aa40751 318 PRINTS PR00412 Epoxide hydrolase signature 79 94 1.3E-9 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 syc0518_d c49cc0028863d38489c5d5758aa40751 318 PRINTS PR00412 Epoxide hydrolase signature 123 136 1.3E-9 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 syc0518_d c49cc0028863d38489c5d5758aa40751 318 PRINTS PR00412 Epoxide hydrolase signature 288 310 1.3E-9 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 syc0518_d c49cc0028863d38489c5d5758aa40751 318 SUPERFAMILY SSF53474 35 311 5.5E-63 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold syc0518_d c49cc0028863d38489c5d5758aa40751 318 Gene3D G3DSA:3.40.50.1820 22 317 3.0E-59 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold syc0292_c e4b3963ff953ab4ca80ae50f7ba4bbe0 392 Gene3D G3DSA:2.60.40.790 322 392 1.5E-19 T 11-10-2018 IPR008978 HSP20-like chaperone syc0292_c e4b3963ff953ab4ca80ae50f7ba4bbe0 392 Pfam PF02374 Anion-transporting ATPase 1 306 8.7E-108 T 11-10-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 syc0292_c e4b3963ff953ab4ca80ae50f7ba4bbe0 392 SUPERFAMILY SSF52540 1 295 9.41E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0292_c e4b3963ff953ab4ca80ae50f7ba4bbe0 392 TIGRFAM TIGR00345 GET3_arsA_TRC40: transport-energizing ATPase, TRC40/GET3/ArsA family 5 305 1.2E-108 T 11-10-2018 IPR016300 Arsenical pump ATPase, ArsA/GET3 GO:0005524|GO:0016887 Reactome: R-HSA-381038 syc0292_c e4b3963ff953ab4ca80ae50f7ba4bbe0 392 SUPERFAMILY SSF49764 318 389 3.0E-6 T 11-10-2018 IPR008978 HSP20-like chaperone syc0292_c e4b3963ff953ab4ca80ae50f7ba4bbe0 392 Gene3D G3DSA:3.40.50.300 1 321 5.0E-81 T 11-10-2018 syc0771_d c7d91d722819c7bc9f77020d71f8eb39 79 Gene3D G3DSA:1.10.260.40 2 64 1.8E-9 T 11-10-2018 syc0771_d c7d91d722819c7bc9f77020d71f8eb39 79 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 7 67 9.3E-14 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 syc0771_d c7d91d722819c7bc9f77020d71f8eb39 79 SUPERFAMILY SSF47413 2 58 3.1E-11 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 syc0771_d c7d91d722819c7bc9f77020d71f8eb39 79 SMART SM00530 6 62 1.6E-4 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 syc2500_d f80185b17789e4d2133007bdfba2cf5c 323 SMART SM00331 67 313 7.2E-29 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 syc2500_d f80185b17789e4d2133007bdfba2cf5c 323 Gene3D G3DSA:3.60.40.10 39 314 4.1E-60 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 syc2500_d f80185b17789e4d2133007bdfba2cf5c 323 Pfam PF13672 Protein phosphatase 2C 91 281 6.8E-14 T 11-10-2018 syc2500_d f80185b17789e4d2133007bdfba2cf5c 323 SUPERFAMILY SSF81606 53 313 6.67E-51 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 syc2500_d f80185b17789e4d2133007bdfba2cf5c 323 SMART SM00332 51 311 5.5E-23 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 syc0476_c 639788081c6f68587898defbd659b5cc 238 SUPERFAMILY SSF55666 154 237 1.31E-22 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 syc0476_c 639788081c6f68587898defbd659b5cc 238 Pfam PF01138 3' exoribonuclease family, domain 1 13 141 1.7E-18 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 syc0476_c 639788081c6f68587898defbd659b5cc 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 5 237 5.6E-101 T 11-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 syc0476_c 639788081c6f68587898defbd659b5cc 238 Pfam PF03725 3' exoribonuclease family, domain 2 160 224 1.7E-8 T 11-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 syc0476_c 639788081c6f68587898defbd659b5cc 238 SUPERFAMILY SSF54211 3 187 2.33E-41 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold syc0476_c 639788081c6f68587898defbd659b5cc 238 ProSitePatterns PS01277 Ribonuclease PH signature. 117 130 - T 11-10-2018 IPR018336 Ribonuclease PH, conserved site syc0476_c 639788081c6f68587898defbd659b5cc 238 Hamap MF_00564 Ribonuclease PH [rph]. 14 238 40.485 T 11-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 syc0476_c 639788081c6f68587898defbd659b5cc 238 Gene3D G3DSA:3.30.230.70 2 238 1.0E-54 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 syc1414_c 27ef51feba17cf8a86e808a1a69fa4f0 327 SMART SM00345 18 77 6.5E-16 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 syc1414_c 27ef51feba17cf8a86e808a1a69fa4f0 327 Gene3D G3DSA:1.10.10.10 11 129 1.4E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily syc1414_c 27ef51feba17cf8a86e808a1a69fa4f0 327 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 77 3.1E-14 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 syc1414_c 27ef51feba17cf8a86e808a1a69fa4f0 327 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 4.1E-5 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 syc1414_c 27ef51feba17cf8a86e808a1a69fa4f0 327 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 4.1E-5 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 syc1414_c 27ef51feba17cf8a86e808a1a69fa4f0 327 SUPERFAMILY SSF46785 7 85 3.98E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily syc1536_d 1095dd2cf48ec46cd3fd18a464473be4 251 SUPERFAMILY SSF52540 7 230 1.85E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc1536_d 1095dd2cf48ec46cd3fd18a464473be4 251 Gene3D G3DSA:3.40.50.300 11 250 3.1E-64 T 11-10-2018 syc1536_d 1095dd2cf48ec46cd3fd18a464473be4 251 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 syc1536_d 1095dd2cf48ec46cd3fd18a464473be4 251 Pfam PF00005 ABC transporter 27 172 3.0E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 syc1536_d 1095dd2cf48ec46cd3fd18a464473be4 251 SMART SM00382 36 249 3.8E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain syc0434_d 1b7a4aac7c19105167e46e787bb2e423 126 SUPERFAMILY SSF52402 2 126 6.2E-26 T 11-10-2018 syc0434_d 1b7a4aac7c19105167e46e787bb2e423 126 Gene3D G3DSA:3.40.50.620 1 126 2.6E-24 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold syc0434_d 1b7a4aac7c19105167e46e787bb2e423 126 Pfam PF00582 Universal stress protein family 1 126 2.4E-21 T 11-10-2018 IPR006016 UspA syc0434_d 1b7a4aac7c19105167e46e787bb2e423 126 PRINTS PR01438 Universal stress protein signature 2 20 8.1E-12 T 11-10-2018 IPR006015 Universal stress protein A syc0434_d 1b7a4aac7c19105167e46e787bb2e423 126 PRINTS PR01438 Universal stress protein signature 104 126 8.1E-12 T 11-10-2018 IPR006015 Universal stress protein A syc0434_d 1b7a4aac7c19105167e46e787bb2e423 126 PRINTS PR01438 Universal stress protein signature 86 98 8.1E-12 T 11-10-2018 IPR006015 Universal stress protein A syc1750_c ff906e102a938e01edc7f097c74e960c 233 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 30 206 1.2E-60 T 11-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 syc1750_c ff906e102a938e01edc7f097c74e960c 233 Gene3D G3DSA:3.30.930.10 2 209 1.5E-70 T 11-10-2018 syc1750_c ff906e102a938e01edc7f097c74e960c 233 Hamap MF_00013 Octanoyltransferase [lipB]. 5 211 34.566 T 11-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 syc1750_c ff906e102a938e01edc7f097c74e960c 233 SUPERFAMILY SSF55681 7 211 7.29E-63 T 11-10-2018 syc1750_c ff906e102a938e01edc7f097c74e960c 233 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 76 91 - T 11-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 syc1750_c ff906e102a938e01edc7f097c74e960c 233 Pfam PF03099 Biotin/lipoate A/B protein ligase family 69 162 1.3E-6 T 11-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 syc1750_c ff906e102a938e01edc7f097c74e960c 233 PIRSF PIRSF016262 3 221 9.3E-58 T 11-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 syc1750_c ff906e102a938e01edc7f097c74e960c 233 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 80 133 1.0E-24 T 11-10-2018 syc0391_d fcf16165d0f4523294debe20773f2319 166 SUPERFAMILY SSF46785 20 162 1.23E-32 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily syc0391_d fcf16165d0f4523294debe20773f2319 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 138 158 1.4E-11 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 syc0391_d fcf16165d0f4523294debe20773f2319 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 71 87 1.4E-11 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 syc0391_d fcf16165d0f4523294debe20773f2319 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 107 123 1.4E-11 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 syc0391_d fcf16165d0f4523294debe20773f2319 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 103 1.4E-11 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 syc0391_d fcf16165d0f4523294debe20773f2319 166 Pfam PF01047 MarR family 55 112 7.6E-13 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 syc0391_d fcf16165d0f4523294debe20773f2319 166 SMART SM00347 44 147 2.1E-24 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 syc0391_d fcf16165d0f4523294debe20773f2319 166 Gene3D G3DSA:1.10.10.10 1 163 3.1E-37 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily syc1266_c 759e8c6d203d6b0634b27db6981877dd 379 SUPERFAMILY SSF161098 84 155 1.16E-9 T 11-10-2018 IPR035906 MetI-like superfamily syc1266_c 759e8c6d203d6b0634b27db6981877dd 379 SUPERFAMILY SSF161098 183 359 5.63E-27 T 11-10-2018 IPR035906 MetI-like superfamily syc1266_c 759e8c6d203d6b0634b27db6981877dd 379 Gene3D G3DSA:1.10.3720.10 180 376 6.5E-32 T 11-10-2018 IPR035906 MetI-like superfamily syc1266_c 759e8c6d203d6b0634b27db6981877dd 379 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 247 373 1.5E-15 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 syc1266_c 759e8c6d203d6b0634b27db6981877dd 379 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 82 146 4.2E-13 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 syc1447_d 7f95357e7671ec8e115f88c3234886bf 172 Pfam PF08241 Methyltransferase domain 25 81 9.3E-8 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 syc1447_d 7f95357e7671ec8e115f88c3234886bf 172 SUPERFAMILY SSF53335 27 146 9.85E-14 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase syc1447_d 7f95357e7671ec8e115f88c3234886bf 172 Gene3D G3DSA:3.40.50.150 10 159 1.2E-12 T 11-10-2018 syc1955_c ec529e55e97262896ba9ef4c956bce91 1328 Pfam PF11965 Domain of unknown function (DUF3479) 24 186 6.6E-52 T 11-10-2018 IPR022571 Magnesium chelatase, subunit H, N-terminal GO:0016851 KEGG: 00860+6.6.1.1|MetaCyc: PWY-5531|MetaCyc: PWY-7159 syc1955_c ec529e55e97262896ba9ef4c956bce91 1328 TIGRFAM TIGR02025 BchH: magnesium chelatase, H subunit 24 1327 0.0 T 11-10-2018 IPR011771 Magnesium-chelatase, subunit H GO:0015995|GO:0016851 KEGG: 00860+6.6.1.1|MetaCyc: PWY-5531|MetaCyc: PWY-7159 syc1955_c ec529e55e97262896ba9ef4c956bce91 1328 Pfam PF02514 CobN/Magnesium Chelatase 190 1309 0.0 T 11-10-2018 IPR003672 CobN/magnesium chelatase GO:0009058 syc1721_c 2c1f31ffc9b83320dd6e62607f8710a7 1196 Gene3D G3DSA:3.40.920.10 418 621 5.3E-72 T 11-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 syc1721_c 2c1f31ffc9b83320dd6e62607f8710a7 1196 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 8 1184 0.0 T 11-10-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 syc1721_c 2c1f31ffc9b83320dd6e62607f8710a7 1196 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 271 357 7.1E-17 T 11-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II syc1721_c 2c1f31ffc9b83320dd6e62607f8710a7 1196 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 745 756 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site syc1721_c 2c1f31ffc9b83320dd6e62607f8710a7 1196 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 689 700 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site syc1721_c 2c1f31ffc9b83320dd6e62607f8710a7 1196 Pfam PF13484 4Fe-4S double cluster binding domain 689 757 8.0E-12 T 11-10-2018 syc1721_c 2c1f31ffc9b83320dd6e62607f8710a7 1196 SUPERFAMILY SSF53323 418 668 8.5E-72 T 11-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 syc1721_c 2c1f31ffc9b83320dd6e62607f8710a7 1196 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 427 607 7.4E-24 T 11-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 syc1721_c 2c1f31ffc9b83320dd6e62607f8710a7 1196 Gene3D G3DSA:3.40.50.970 794 1186 5.9E-153 T 11-10-2018 syc1721_c 2c1f31ffc9b83320dd6e62607f8710a7 1196 Pfam PF10371 Domain of unknown function 632 677 2.0E-20 T 11-10-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 syc1721_c 2c1f31ffc9b83320dd6e62607f8710a7 1196 SUPERFAMILY SSF54862 665 838 7.85E-21 T 11-10-2018 syc1721_c 2c1f31ffc9b83320dd6e62607f8710a7 1196 Gene3D G3DSA:4.10.780.10 628 668 2.0E-5 T 11-10-2018 IPR037112 Pyruvate-flavodoxin oxidoreductase, EKR domain superfamily syc1721_c 2c1f31ffc9b83320dd6e62607f8710a7 1196 PIRSF PIRSF000159 2 1192 0.0 T 11-10-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 syc1721_c 2c1f31ffc9b83320dd6e62607f8710a7 1196 SUPERFAMILY SSF52922 262 415 1.86E-44 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 syc1721_c 2c1f31ffc9b83320dd6e62607f8710a7 1196 Gene3D G3DSA:3.30.70.20 669 791 9.5E-37 T 11-10-2018 syc1721_c 2c1f31ffc9b83320dd6e62607f8710a7 1196 Gene3D G3DSA:3.40.50.970 6 260 9.3E-107 T 11-10-2018 syc1721_c 2c1f31ffc9b83320dd6e62607f8710a7 1196 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 19 249 1.6E-81 T 11-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 syc1721_c 2c1f31ffc9b83320dd6e62607f8710a7 1196 Gene3D G3DSA:3.40.50.920 261 417 2.9E-61 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 syc1721_c 2c1f31ffc9b83320dd6e62607f8710a7 1196 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 973 1085 6.2E-8 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 syc1721_c 2c1f31ffc9b83320dd6e62607f8710a7 1196 SUPERFAMILY SSF52518 8 260 5.42E-78 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold syc1721_c 2c1f31ffc9b83320dd6e62607f8710a7 1196 SUPERFAMILY SSF52518 794 1187 4.77E-121 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold syc1721_c 2c1f31ffc9b83320dd6e62607f8710a7 1196 SMART SM00890 622 679 2.7E-26 T 11-10-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 syc0643_c 37acd1654bee7c95f2d2c13bac8c1050 91 Pfam PF03776 Septum formation topological specificity factor MinE 16 82 2.0E-24 T 11-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 syc0643_c 37acd1654bee7c95f2d2c13bac8c1050 91 Gene3D G3DSA:3.30.1070.10 20 83 3.1E-17 T 11-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 syc0643_c 37acd1654bee7c95f2d2c13bac8c1050 91 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 4 83 2.8E-28 T 11-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 syc0643_c 37acd1654bee7c95f2d2c13bac8c1050 91 Hamap MF_00262 Cell division topological specificity factor [minE]. 2 83 16.736 T 11-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 syc0643_c 37acd1654bee7c95f2d2c13bac8c1050 91 SUPERFAMILY SSF55229 32 85 7.06E-15 T 11-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 syc0428_d 47fc4368e785ac1d0a8124019165d212 719 SUPERFAMILY SSF56112 19 347 3.69E-48 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily syc0428_d 47fc4368e785ac1d0a8124019165d212 719 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 34 58 - T 11-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 syc0428_d 47fc4368e785ac1d0a8124019165d212 719 Gene3D G3DSA:1.10.510.10 119 298 7.4E-55 T 11-10-2018 syc0428_d 47fc4368e785ac1d0a8124019165d212 719 Gene3D G3DSA:3.30.200.20 13 118 7.4E-55 T 11-10-2018 syc0428_d 47fc4368e785ac1d0a8124019165d212 719 Gene3D G3DSA:2.60.120.380 571 663 3.1E-8 T 11-10-2018 syc0428_d 47fc4368e785ac1d0a8124019165d212 719 Pfam PF00069 Protein kinase domain 28 288 4.0E-27 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 syc2351_d 3092840f767190692c19b4f0ccb3cdad 301 Gene3D G3DSA:3.30.43.10 5 81 5.5E-20 T 11-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 syc2351_d 3092840f767190692c19b4f0ccb3cdad 301 Pfam PF01565 FAD binding domain 31 155 2.4E-28 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 syc2351_d 3092840f767190692c19b4f0ccb3cdad 301 Gene3D G3DSA:3.90.78.10 212 300 9.5E-35 T 11-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 syc2351_d 3092840f767190692c19b4f0ccb3cdad 301 Gene3D G3DSA:3.30.465.10 87 211 8.1E-35 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 syc2351_d 3092840f767190692c19b4f0ccb3cdad 301 SUPERFAMILY SSF56194 202 299 5.49E-38 T 11-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 syc2351_d 3092840f767190692c19b4f0ccb3cdad 301 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 17 295 8.5E-88 T 11-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 syc2351_d 3092840f767190692c19b4f0ccb3cdad 301 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 301 89.935 T 11-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 syc2351_d 3092840f767190692c19b4f0ccb3cdad 301 SUPERFAMILY SSF56176 16 194 3.02E-40 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 syc2351_d 3092840f767190692c19b4f0ccb3cdad 301 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 200 293 5.4E-31 T 11-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 syc1970_d 428801b9dddc451ba3a340d1b8334d5e 391 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 19 146 2.2E-53 T 11-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 syc1970_d 428801b9dddc451ba3a340d1b8334d5e 391 PRINTS PR00097 Anthranilate synthase component II signature 274 285 8.0E-7 T 11-10-2018 syc1970_d 428801b9dddc451ba3a340d1b8334d5e 391 PRINTS PR00097 Anthranilate synthase component II signature 357 370 8.0E-7 T 11-10-2018 syc1970_d 428801b9dddc451ba3a340d1b8334d5e 391 PRINTS PR00097 Anthranilate synthase component II signature 246 255 8.0E-7 T 11-10-2018 syc1970_d 428801b9dddc451ba3a340d1b8334d5e 391 Gene3D G3DSA:3.40.50.880 165 385 1.7E-67 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like syc1970_d 428801b9dddc451ba3a340d1b8334d5e 391 PRINTS PR00096 Glutamine amidotransferase superfamily signature 246 255 1.5E-12 T 11-10-2018 syc1970_d 428801b9dddc451ba3a340d1b8334d5e 391 PRINTS PR00096 Glutamine amidotransferase superfamily signature 274 285 1.5E-12 T 11-10-2018 syc1970_d 428801b9dddc451ba3a340d1b8334d5e 391 PRINTS PR00096 Glutamine amidotransferase superfamily signature 357 370 1.5E-12 T 11-10-2018 syc1970_d 428801b9dddc451ba3a340d1b8334d5e 391 Gene3D G3DSA:3.50.30.20 16 163 1.0E-58 T 11-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 syc1970_d 428801b9dddc451ba3a340d1b8334d5e 391 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 314 325 1.0E-37 T 11-10-2018 syc1970_d 428801b9dddc451ba3a340d1b8334d5e 391 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 243 257 1.0E-37 T 11-10-2018 syc1970_d 428801b9dddc451ba3a340d1b8334d5e 391 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 204 218 1.0E-37 T 11-10-2018 syc1970_d 428801b9dddc451ba3a340d1b8334d5e 391 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 274 290 1.0E-37 T 11-10-2018 syc1970_d 428801b9dddc451ba3a340d1b8334d5e 391 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 291 308 1.0E-37 T 11-10-2018 syc1970_d 428801b9dddc451ba3a340d1b8334d5e 391 SUPERFAMILY SSF52021 18 163 3.92E-58 T 11-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 syc1970_d 428801b9dddc451ba3a340d1b8334d5e 391 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 19 383 1.1E-152 T 11-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 syc1970_d 428801b9dddc451ba3a340d1b8334d5e 391 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 17 386 49.287 T 11-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 syc1970_d 428801b9dddc451ba3a340d1b8334d5e 391 Pfam PF00117 Glutamine amidotransferase class-I 206 380 7.1E-46 T 11-10-2018 IPR017926 Glutamine amidotransferase syc1970_d 428801b9dddc451ba3a340d1b8334d5e 391 SUPERFAMILY SSF52317 167 385 2.45E-58 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like syc1970_d 428801b9dddc451ba3a340d1b8334d5e 391 SMART SM01097 17 147 7.1E-92 T 11-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 syc1471_d 9281cbc3efab2c312c380739ef3071f6 325 Gene3D G3DSA:3.20.20.100 3 321 1.2E-88 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily syc1471_d 9281cbc3efab2c312c380739ef3071f6 325 SUPERFAMILY SSF51430 7 314 6.68E-82 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily syc1471_d 9281cbc3efab2c312c380739ef3071f6 325 Pfam PF00248 Aldo/keto reductase family 19 313 6.3E-67 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain syc1471_d 9281cbc3efab2c312c380739ef3071f6 325 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 140 157 - T 11-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 syc1471_d 9281cbc3efab2c312c380739ef3071f6 325 PRINTS PR00069 Aldo-keto reductase signature 140 157 1.4E-8 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 syc1471_d 9281cbc3efab2c312c380739ef3071f6 325 PRINTS PR00069 Aldo-keto reductase signature 50 74 1.4E-8 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 syc1471_d 9281cbc3efab2c312c380739ef3071f6 325 PRINTS PR00069 Aldo-keto reductase signature 108 126 1.4E-8 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 syc1227_c 585405e3db7995f014c2b4d797d8825f 113 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 22 41 - T 11-10-2018 IPR020808 Bacterial microcompartments protein, conserved site syc1227_c 585405e3db7995f014c2b4d797d8825f 113 Pfam PF00936 BMC domain 5 82 9.8E-23 T 11-10-2018 IPR000249 Microcompartment protein, bacteria syc1227_c 585405e3db7995f014c2b4d797d8825f 113 Gene3D G3DSA:3.30.70.1710 1 113 2.4E-44 T 11-10-2018 syc1227_c 585405e3db7995f014c2b4d797d8825f 113 SUPERFAMILY SSF143414 4 101 3.14E-29 T 11-10-2018 IPR037233 CcmK-like superfamily syc1227_c 585405e3db7995f014c2b4d797d8825f 113 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 1 65 3.0E-30 T 11-10-2018 syc1227_c 585405e3db7995f014c2b4d797d8825f 113 SMART SM00877 4 82 2.7E-27 T 11-10-2018 IPR000249 Microcompartment protein, bacteria syc1427_c b0d0a10d6a76aea7337cabb06c2d3b3e 229 SUPERFAMILY SSF47413 43 91 2.28E-5 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 syc1427_c b0d0a10d6a76aea7337cabb06c2d3b3e 229 Gene3D G3DSA:1.10.260.40 17 134 5.9E-6 T 11-10-2018 syc1427_c b0d0a10d6a76aea7337cabb06c2d3b3e 229 SMART SM00530 20 91 9.5E-6 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 syc1427_c b0d0a10d6a76aea7337cabb06c2d3b3e 229 Pfam PF13560 Helix-turn-helix domain 16 93 2.3E-11 T 11-10-2018 syc0156_d 4a1a8790624b2a255b680352a4146a73 411 Gene3D G3DSA:2.40.30.170 314 359 1.7E-10 T 11-10-2018 syc0156_d 4a1a8790624b2a255b680352a4146a73 411 Gene3D G3DSA:2.40.50.100 276 313 1.7E-10 T 11-10-2018 syc0156_d 4a1a8790624b2a255b680352a4146a73 411 Gene3D G3DSA:2.40.50.100 62 95 7.5E-6 T 11-10-2018 syc0156_d 4a1a8790624b2a255b680352a4146a73 411 Gene3D G3DSA:1.10.287.470 211 275 1.7E-10 T 11-10-2018 syc0156_d 4a1a8790624b2a255b680352a4146a73 411 Pfam PF13437 HlyD family secretion protein 64 139 7.3E-5 T 11-10-2018 syc0156_d 4a1a8790624b2a255b680352a4146a73 411 Pfam PF13437 HlyD family secretion protein 284 361 2.2E-12 T 11-10-2018 syc0156_d 4a1a8790624b2a255b680352a4146a73 411 Gene3D G3DSA:1.10.287.470 97 167 7.5E-6 T 11-10-2018 syc0756_d ef266ac8c6f279d329e02396466f7e48 854 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 735 750 1.5E-5 T 11-10-2018 syc0756_d ef266ac8c6f279d329e02396466f7e48 854 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 788 800 1.5E-5 T 11-10-2018 syc0756_d ef266ac8c6f279d329e02396466f7e48 854 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 752 767 1.5E-5 T 11-10-2018 syc0756_d ef266ac8c6f279d329e02396466f7e48 854 PIRSF PIRSF000854 14 835 0.0 T 11-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 syc0756_d ef266ac8c6f279d329e02396466f7e48 854 SUPERFAMILY SSF52009 388 506 6.93E-32 T 11-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 syc0756_d ef266ac8c6f279d329e02396466f7e48 854 SUPERFAMILY SSF51621 504 832 2.06E-97 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 syc0756_d ef266ac8c6f279d329e02396466f7e48 854 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 20 830 0.0 T 11-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 syc0756_d ef266ac8c6f279d329e02396466f7e48 854 Gene3D G3DSA:3.30.1490.20 16 229 7.4E-69 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 syc0756_d ef266ac8c6f279d329e02396466f7e48 854 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 521 829 3.3E-59 T 11-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 syc0756_d ef266ac8c6f279d329e02396466f7e48 854 Gene3D G3DSA:3.20.20.60 518 830 4.2E-101 T 11-10-2018 syc0756_d ef266ac8c6f279d329e02396466f7e48 854 Gene3D G3DSA:3.50.30.10 398 517 1.4E-38 T 11-10-2018 syc0756_d ef266ac8c6f279d329e02396466f7e48 854 SUPERFAMILY SSF56059 17 424 3.06E-108 T 11-10-2018 syc0756_d ef266ac8c6f279d329e02396466f7e48 854 Gene3D G3DSA:3.30.470.20 230 397 2.3E-54 T 11-10-2018 syc0756_d ef266ac8c6f279d329e02396466f7e48 854 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 735 753 - T 11-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 syc0756_d ef266ac8c6f279d329e02396466f7e48 854 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 32 382 5.7E-119 T 11-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 syc0756_d ef266ac8c6f279d329e02396466f7e48 854 Pfam PF00391 PEP-utilising enzyme, mobile domain 424 495 2.2E-24 T 11-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 syc0756_d ef266ac8c6f279d329e02396466f7e48 854 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 454 465 - T 11-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 syc1070_d 67284f3b1892a10222905b8d873cc5bd 364 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 137 355 6.4E-56 T 11-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 syc1070_d 67284f3b1892a10222905b8d873cc5bd 364 Gene3D G3DSA:2.30.42.10 119 214 6.0E-17 T 11-10-2018 syc1070_d 67284f3b1892a10222905b8d873cc5bd 364 Pfam PF13180 PDZ domain 126 197 4.2E-8 T 11-10-2018 IPR001478 PDZ domain GO:0005515 syc1070_d 67284f3b1892a10222905b8d873cc5bd 364 Pfam PF02163 Peptidase family M50 6 343 3.1E-65 T 11-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 syc1070_d 67284f3b1892a10222905b8d873cc5bd 364 SUPERFAMILY SSF50156 124 200 6.18E-11 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 syc1564_c 54035481409aa3f7c9cbef02ec8e2d4b 239 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 15 205 9.4E-26 T 11-10-2018 IPR013830 SGNH hydrolase-type esterase domain syc1564_c 54035481409aa3f7c9cbef02ec8e2d4b 239 SUPERFAMILY SSF52266 10 212 6.0E-43 T 11-10-2018 syc1564_c 54035481409aa3f7c9cbef02ec8e2d4b 239 Gene3D G3DSA:3.40.50.1110 10 220 4.6E-56 T 11-10-2018 IPR036514 SGNH hydrolase superfamily syc0069_c 709494fe6b84f11958e2c9d879775cfe 408 SUPERFAMILY SSF52283 25 198 3.06E-39 T 11-10-2018 syc0069_c 709494fe6b84f11958e2c9d879775cfe 408 SMART SM01003 28 167 1.1E-44 T 11-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal syc0069_c 709494fe6b84f11958e2c9d879775cfe 408 SMART SM01002 176 340 1.3E-75 T 11-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain syc0069_c 709494fe6b84f11958e2c9d879775cfe 408 Gene3D G3DSA:3.40.50.720 28 392 8.7E-123 T 11-10-2018 syc0069_c 709494fe6b84f11958e2c9d879775cfe 408 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 200 225 - T 11-10-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 syc0069_c 709494fe6b84f11958e2c9d879775cfe 408 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 171 392 1.8E-60 T 11-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain syc0069_c 709494fe6b84f11958e2c9d879775cfe 408 Gene3D G3DSA:3.40.50.720 167 347 8.7E-123 T 11-10-2018 syc0069_c 709494fe6b84f11958e2c9d879775cfe 408 SUPERFAMILY SSF51735 168 340 8.6E-33 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily syc0069_c 709494fe6b84f11958e2c9d879775cfe 408 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 29 166 2.0E-34 T 11-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal syc0924_d 5d8caac5bdf7ef4809d6cfa3179416bd 200 ProSitePatterns PS01081 TetR-type HTH domain signature. 30 61 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site syc0924_d 5d8caac5bdf7ef4809d6cfa3179416bd 200 SUPERFAMILY SSF48498 89 196 4.62E-8 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily syc0924_d 5d8caac5bdf7ef4809d6cfa3179416bd 200 SUPERFAMILY SSF46689 11 85 2.89E-19 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 syc0924_d 5d8caac5bdf7ef4809d6cfa3179416bd 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 1.6E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 syc0924_d 5d8caac5bdf7ef4809d6cfa3179416bd 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 1.6E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 syc0924_d 5d8caac5bdf7ef4809d6cfa3179416bd 200 Gene3D G3DSA:1.10.357.10 11 199 8.8E-35 T 11-10-2018 syc0924_d 5d8caac5bdf7ef4809d6cfa3179416bd 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 64 1.5E-16 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 syc0142_c 2b81a6399c39ff095c9b10eae93d7345 251 Pfam PF01925 Sulfite exporter TauE/SafE 4 243 8.0E-50 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 syc2183_d 78c681cc1c365e65fe4cb7ad83f5baaa 224 Pfam PF01895 PhoU domain 27 114 6.2E-20 T 11-10-2018 IPR026022 PhoU domain syc2183_d 78c681cc1c365e65fe4cb7ad83f5baaa 224 Pfam PF01895 PhoU domain 133 214 5.5E-13 T 11-10-2018 IPR026022 PhoU domain syc2183_d 78c681cc1c365e65fe4cb7ad83f5baaa 224 SUPERFAMILY SSF109755 14 223 3.45E-53 T 11-10-2018 syc2183_d 78c681cc1c365e65fe4cb7ad83f5baaa 224 Gene3D G3DSA:1.20.58.220 12 223 1.5E-55 T 11-10-2018 IPR038078 PhoU-like domain superfamily syc2183_d 78c681cc1c365e65fe4cb7ad83f5baaa 224 PIRSF PIRSF003107 9 224 1.1E-50 T 11-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 syc2183_d 78c681cc1c365e65fe4cb7ad83f5baaa 224 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 15 221 2.0E-48 T 11-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 syc1651_d 949101820c20ff6e9e36fff306a5b065 254 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 249 9.4E-41 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 syc1651_d 949101820c20ff6e9e36fff306a5b065 254 Gene3D G3DSA:1.10.3720.10 15 245 1.4E-26 T 11-10-2018 IPR035906 MetI-like superfamily syc1651_d 949101820c20ff6e9e36fff306a5b065 254 SUPERFAMILY SSF161098 19 237 3.4E-21 T 11-10-2018 IPR035906 MetI-like superfamily syc1449_c 71a51ce32b1600f336f1ae7319af6311 848 Pfam PF00534 Glycosyl transferases group 1 624 766 4.2E-11 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 syc1449_c 71a51ce32b1600f336f1ae7319af6311 848 Gene3D G3DSA:3.90.550.10 82 395 8.3E-30 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases syc1449_c 71a51ce32b1600f336f1ae7319af6311 848 SUPERFAMILY SSF53756 576 842 2.67E-26 T 11-10-2018 syc1449_c 71a51ce32b1600f336f1ae7319af6311 848 SUPERFAMILY SSF53448 128 370 1.03E-28 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases syc1449_c 71a51ce32b1600f336f1ae7319af6311 848 Pfam PF00535 Glycosyl transferase family 2 131 237 2.2E-23 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 syc1449_c 71a51ce32b1600f336f1ae7319af6311 848 Gene3D G3DSA:3.40.50.2000 618 844 3.9E-24 T 11-10-2018 syc1288_c 7592125808cdbb7afbe25ad6a880baa4 67 Pfam PF00737 Photosystem II 10 kDa phosphoprotein 4 55 4.2E-34 T 11-10-2018 IPR001056 Photosystem II reaction centre protein H GO:0009523|GO:0015979|GO:0016020|GO:0042301|GO:0050821 syc1288_c 7592125808cdbb7afbe25ad6a880baa4 67 ProDom PD003584 PHOTOSYSTEM II PHOSPHOPROTEIN CHLOROPLAST PHOTOSYNTHESIS H MEMBRANE CENTER REACTION PSII-H 1 62 2.0E-20 T 11-10-2018 IPR001056 Photosystem II reaction centre protein H GO:0009523|GO:0015979|GO:0016020|GO:0042301|GO:0050821 syc1288_c 7592125808cdbb7afbe25ad6a880baa4 67 Gene3D G3DSA:1.20.5.880 1 66 1.2E-37 T 11-10-2018 IPR036863 Photosystem II reaction centre protein H superfamily GO:0009523|GO:0015979|GO:0016020|GO:0042301|GO:0050821 syc1288_c 7592125808cdbb7afbe25ad6a880baa4 67 Hamap MF_00752 Photosystem II reaction center protein H [psbH]. 1 61 23.562 T 11-10-2018 IPR001056 Photosystem II reaction centre protein H GO:0009523|GO:0015979|GO:0016020|GO:0042301|GO:0050821 syc1288_c 7592125808cdbb7afbe25ad6a880baa4 67 SUPERFAMILY SSF161025 3 64 7.85E-31 T 11-10-2018 IPR036863 Photosystem II reaction centre protein H superfamily GO:0009523|GO:0015979|GO:0016020|GO:0042301|GO:0050821 syc2138_d 47c463b58b2ae48584ffccb69039ab91 145 SMART SM00100 16 134 6.9E-19 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain syc2138_d 47c463b58b2ae48584ffccb69039ab91 145 SUPERFAMILY SSF51206 24 137 1.83E-23 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like syc2138_d 47c463b58b2ae48584ffccb69039ab91 145 Pfam PF00027 Cyclic nucleotide-binding domain 38 117 5.0E-15 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain syc2138_d 47c463b58b2ae48584ffccb69039ab91 145 Gene3D G3DSA:2.60.120.10 20 139 1.7E-23 T 11-10-2018 IPR014710 RmlC-like jelly roll fold syc2068_c d899d1923e1d040d163b21dc2409985a 247 SUPERFAMILY SSF53448 2 203 3.43E-47 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases syc2068_c d899d1923e1d040d163b21dc2409985a 247 Gene3D G3DSA:3.90.550.10 1 219 3.8E-43 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases syc2068_c d899d1923e1d040d163b21dc2409985a 247 Pfam PF00535 Glycosyl transferase family 2 5 128 7.0E-22 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 syc1373_d cad473a401abe843d5337a6d75f3dafb 349 Gene3D G3DSA:3.50.50.60 11 343 2.3E-62 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc1373_d cad473a401abe843d5337a6d75f3dafb 349 Pfam PF13450 NAD(P)-binding Rossmann-like domain 12 61 4.8E-10 T 11-10-2018 syc1373_d cad473a401abe843d5337a6d75f3dafb 349 Pfam PF01593 Flavin containing amine oxidoreductase 107 293 1.6E-4 T 11-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 syc1373_d cad473a401abe843d5337a6d75f3dafb 349 Gene3D G3DSA:3.90.660.10 48 295 2.3E-62 T 11-10-2018 syc1373_d cad473a401abe843d5337a6d75f3dafb 349 SUPERFAMILY SSF51905 9 347 8.01E-26 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc1997_c 25f27ff84dc2a5a61f1e8d159b567b8d 664 SMART SM00116 16 64 2.8E-5 T 11-10-2018 IPR000644 CBS domain syc1997_c 25f27ff84dc2a5a61f1e8d159b567b8d 664 SMART SM00116 217 265 1.3E-5 T 11-10-2018 IPR000644 CBS domain syc1997_c 25f27ff84dc2a5a61f1e8d159b567b8d 664 SMART SM00116 148 200 4.3 T 11-10-2018 IPR000644 CBS domain syc1997_c 25f27ff84dc2a5a61f1e8d159b567b8d 664 SMART SM00116 81 131 0.0011 T 11-10-2018 IPR000644 CBS domain syc1997_c 25f27ff84dc2a5a61f1e8d159b567b8d 664 Pfam PF01590 GAF domain 331 471 1.1E-17 T 11-10-2018 IPR003018 GAF domain GO:0005515 syc1997_c 25f27ff84dc2a5a61f1e8d159b567b8d 664 SMART SM00267 480 656 8.2E-76 T 11-10-2018 IPR000160 GGDEF domain syc1997_c 25f27ff84dc2a5a61f1e8d159b567b8d 664 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 489 654 1.6E-53 T 11-10-2018 IPR000160 GGDEF domain syc1997_c 25f27ff84dc2a5a61f1e8d159b567b8d 664 Pfam PF00571 CBS domain 211 262 7.0E-9 T 11-10-2018 IPR000644 CBS domain syc1997_c 25f27ff84dc2a5a61f1e8d159b567b8d 664 Pfam PF00571 CBS domain 14 62 1.3E-6 T 11-10-2018 IPR000644 CBS domain syc1997_c 25f27ff84dc2a5a61f1e8d159b567b8d 664 Pfam PF00571 CBS domain 141 198 1.9E-6 T 11-10-2018 IPR000644 CBS domain syc1997_c 25f27ff84dc2a5a61f1e8d159b567b8d 664 Pfam PF00571 CBS domain 85 131 7.0E-4 T 11-10-2018 IPR000644 CBS domain syc1997_c 25f27ff84dc2a5a61f1e8d159b567b8d 664 Gene3D G3DSA:3.30.450.40 308 479 2.0E-45 T 11-10-2018 IPR029016 GAF-like domain superfamily syc1997_c 25f27ff84dc2a5a61f1e8d159b567b8d 664 Gene3D G3DSA:3.10.580.10 6 137 5.2E-27 T 11-10-2018 syc1997_c 25f27ff84dc2a5a61f1e8d159b567b8d 664 Gene3D G3DSA:3.10.580.10 138 274 4.1E-32 T 11-10-2018 syc1997_c 25f27ff84dc2a5a61f1e8d159b567b8d 664 SUPERFAMILY SSF54631 10 130 2.53E-22 T 11-10-2018 syc1997_c 25f27ff84dc2a5a61f1e8d159b567b8d 664 SUPERFAMILY SSF55781 309 480 4.58E-44 T 11-10-2018 syc1997_c 25f27ff84dc2a5a61f1e8d159b567b8d 664 Gene3D G3DSA:3.30.70.270 480 656 9.1E-62 T 11-10-2018 syc1997_c 25f27ff84dc2a5a61f1e8d159b567b8d 664 Pfam PF00990 Diguanylate cyclase, GGDEF domain 491 652 3.5E-55 T 11-10-2018 IPR000160 GGDEF domain syc1997_c 25f27ff84dc2a5a61f1e8d159b567b8d 664 SMART SM00065 330 481 5.8E-28 T 11-10-2018 IPR003018 GAF domain GO:0005515 syc1997_c 25f27ff84dc2a5a61f1e8d159b567b8d 664 SUPERFAMILY SSF55073 496 655 2.43E-52 T 11-10-2018 IPR029787 Nucleotide cyclase syc1997_c 25f27ff84dc2a5a61f1e8d159b567b8d 664 SUPERFAMILY SSF54631 139 264 2.71E-23 T 11-10-2018 syc0498_c 3772b75436dc17cbea1d9581ac477e8f 289 Gene3D G3DSA:1.10.3130.20 18 162 1.1E-56 T 11-10-2018 IPR038255 Phycobilisome linker domain superfamily syc0498_c 3772b75436dc17cbea1d9581ac477e8f 289 SMART SM01094 235 287 1.0E-20 T 11-10-2018 IPR008213 CpcD-like domain GO:0030089 syc0498_c 3772b75436dc17cbea1d9581ac477e8f 289 Pfam PF00427 Phycobilisome Linker polypeptide 29 152 2.3E-51 T 11-10-2018 IPR001297 Phycobilisome linker domain GO:0015979|GO:0030089 syc0498_c 3772b75436dc17cbea1d9581ac477e8f 289 PIRSF PIRSF005898 2 284 4.4E-78 T 11-10-2018 IPR016470 Phycobilisome linker protein GO:0015979|GO:0030089 syc0498_c 3772b75436dc17cbea1d9581ac477e8f 289 Pfam PF01383 CpcD/allophycocyanin linker domain 235 286 7.9E-19 T 11-10-2018 IPR008213 CpcD-like domain GO:0030089 syc0498_c 3772b75436dc17cbea1d9581ac477e8f 289 ProDom PD000852 PHYCOBILISOME LINKER POLYPEPTIDE PHOTOSYNTHESIS ELECTRON REPEAT ANCHOR ROD-CORE CHLOROPLAST ROD 21 179 9.0E-90 T 11-10-2018 IPR001297 Phycobilisome linker domain GO:0015979|GO:0030089 syc2280_d 24903930fab78758266bec6ef4218b61 271 Gene3D G3DSA:2.60.120.10 31 173 3.9E-39 T 11-10-2018 IPR014710 RmlC-like jelly roll fold syc2280_d 24903930fab78758266bec6ef4218b61 271 SMART SM00100 38 158 3.8E-22 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain syc2280_d 24903930fab78758266bec6ef4218b61 271 SUPERFAMILY SSF51206 33 168 3.4E-34 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like syc2280_d 24903930fab78758266bec6ef4218b61 271 Pfam PF00027 Cyclic nucleotide-binding domain 57 145 1.1E-21 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain syc2174_d 9e96b98d31deb41cc23b7cf6634296e0 865 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 436 590 2.6E-6 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 syc2174_d 9e96b98d31deb41cc23b7cf6634296e0 865 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 30 188 5.3E-23 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 syc2174_d 9e96b98d31deb41cc23b7cf6634296e0 865 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 629 669 4.5E-6 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 syc2174_d 9e96b98d31deb41cc23b7cf6634296e0 865 SUPERFAMILY SSF52374 20 677 9.3E-143 T 11-10-2018 syc2174_d 9e96b98d31deb41cc23b7cf6634296e0 865 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 21 862 0.0 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 syc2174_d 9e96b98d31deb41cc23b7cf6634296e0 865 Gene3D G3DSA:1.10.730.10 24 794 0.0 T 11-10-2018 syc2174_d 9e96b98d31deb41cc23b7cf6634296e0 865 Gene3D G3DSA:3.90.740.10 244 433 0.0 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 syc2174_d 9e96b98d31deb41cc23b7cf6634296e0 865 Gene3D G3DSA:3.10.20.590 804 863 2.1E-22 T 11-10-2018 syc2174_d 9e96b98d31deb41cc23b7cf6634296e0 865 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 syc2174_d 9e96b98d31deb41cc23b7cf6634296e0 865 Gene3D G3DSA:3.10.330.110 587 638 0.0 T 11-10-2018 syc2174_d 9e96b98d31deb41cc23b7cf6634296e0 865 Gene3D G3DSA:3.40.50.620 49 586 0.0 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold syc2174_d 9e96b98d31deb41cc23b7cf6634296e0 865 Pfam PF08264 Anticodon-binding domain of tRNA 706 824 7.2E-19 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 syc2174_d 9e96b98d31deb41cc23b7cf6634296e0 865 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 20 862 23.291 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 syc2174_d 9e96b98d31deb41cc23b7cf6634296e0 865 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 239 421 3.4E-70 T 11-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 syc2174_d 9e96b98d31deb41cc23b7cf6634296e0 865 SUPERFAMILY SSF47323 673 862 7.85E-38 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 syc2174_d 9e96b98d31deb41cc23b7cf6634296e0 865 SUPERFAMILY SSF50677 243 434 3.45E-57 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 syc2174_d 9e96b98d31deb41cc23b7cf6634296e0 865 PRINTS PR00985 Leucyl-tRNA synthetase signature 202 215 3.4E-54 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 syc2174_d 9e96b98d31deb41cc23b7cf6634296e0 865 PRINTS PR00985 Leucyl-tRNA synthetase signature 577 587 3.4E-54 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 syc2174_d 9e96b98d31deb41cc23b7cf6634296e0 865 PRINTS PR00985 Leucyl-tRNA synthetase signature 505 523 3.4E-54 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 syc2174_d 9e96b98d31deb41cc23b7cf6634296e0 865 PRINTS PR00985 Leucyl-tRNA synthetase signature 232 251 3.4E-54 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 syc2174_d 9e96b98d31deb41cc23b7cf6634296e0 865 PRINTS PR00985 Leucyl-tRNA synthetase signature 169 185 3.4E-54 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 syc2174_d 9e96b98d31deb41cc23b7cf6634296e0 865 PRINTS PR00985 Leucyl-tRNA synthetase signature 544 566 3.4E-54 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 syc2174_d 9e96b98d31deb41cc23b7cf6634296e0 865 PRINTS PR00985 Leucyl-tRNA synthetase signature 143 160 3.4E-54 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 syc0095_d 0e9d4b4fe79014137bcdfcdc1f248ef0 356 Pfam PF09375 Imelysin 59 346 8.2E-64 T 11-10-2018 IPR018976 Imelysin-like domain syc0095_d 0e9d4b4fe79014137bcdfcdc1f248ef0 356 Gene3D G3DSA:1.20.1420.20 40 350 2.4E-71 T 11-10-2018 IPR038352 Imelysin-like domain superfamily syc1101_c 60d64406669cdefc7e98538c908193a4 127 Gene3D G3DSA:1.10.1220.10 9 60 1.6E-6 T 11-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 syc1101_c 60d64406669cdefc7e98538c908193a4 127 SUPERFAMILY SSF47598 16 67 1.85E-5 T 11-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 syc0063_d 6eeaa3dcb2f380c04bab44d0de297605 186 Gene3D G3DSA:2.30.180.10 26 185 1.5E-46 T 11-10-2018 IPR036378 FAS1 domain superfamily syc0063_d 6eeaa3dcb2f380c04bab44d0de297605 186 SMART SM00554 86 184 1.6E-32 T 11-10-2018 IPR000782 FAS1 domain syc0063_d 6eeaa3dcb2f380c04bab44d0de297605 186 Pfam PF02469 Fasciclin domain 62 183 1.3E-35 T 11-10-2018 IPR000782 FAS1 domain syc0063_d 6eeaa3dcb2f380c04bab44d0de297605 186 SUPERFAMILY SSF82153 48 183 1.26E-38 T 11-10-2018 IPR036378 FAS1 domain superfamily syc0495_c 57ce2012e55f90aa781cbbdac5bdc488 163 Pfam PF00502 Phycobilisome protein 9 162 7.1E-49 T 11-10-2018 IPR012128 Phycobilisome, alpha/beta subunit GO:0015979|GO:0030089 syc0495_c 57ce2012e55f90aa781cbbdac5bdc488 163 TIGRFAM TIGR01338 phycocy_alpha: phycocyanin, alpha subunit 3 163 9.4E-89 T 11-10-2018 IPR006246 Phycocyanin, alpha subunit GO:0015979|GO:0030089 syc0495_c 57ce2012e55f90aa781cbbdac5bdc488 163 PIRSF PIRSF000081 2 163 1.5E-44 T 11-10-2018 IPR012128 Phycobilisome, alpha/beta subunit GO:0015979|GO:0030089 syc0495_c 57ce2012e55f90aa781cbbdac5bdc488 163 Gene3D G3DSA:1.10.490.20 1 163 9.4E-67 T 11-10-2018 IPR038719 Phycobilisome, alpha/beta subunit superfamily syc0495_c 57ce2012e55f90aa781cbbdac5bdc488 163 SUPERFAMILY SSF46458 3 163 1.5E-55 T 11-10-2018 IPR009050 Globin-like superfamily syc1337_c 6d68ac8f26c9076080d20a2796e73d5a 372 Gene3D G3DSA:3.40.50.1100 53 352 5.8E-120 T 11-10-2018 syc1337_c 6d68ac8f26c9076080d20a2796e73d5a 372 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 54 345 8.4E-69 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme syc1337_c 6d68ac8f26c9076080d20a2796e73d5a 372 SUPERFAMILY SSF53686 46 366 3.54E-100 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme syc1337_c 6d68ac8f26c9076080d20a2796e73d5a 372 Gene3D G3DSA:3.40.50.1100 85 197 5.8E-120 T 11-10-2018 syc1337_c 6d68ac8f26c9076080d20a2796e73d5a 372 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 77 95 - T 11-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 syc1242_c 6feb23628ec4433cdd86218cfdc6d8c9 243 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 3 233 3.3E-88 T 11-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 syc1242_c 6feb23628ec4433cdd86218cfdc6d8c9 243 Gene3D G3DSA:3.40.1010.10 1 118 3.6E-40 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 syc1242_c 6feb23628ec4433cdd86218cfdc6d8c9 243 Gene3D G3DSA:3.30.950.10 119 242 3.4E-31 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 syc1242_c 6feb23628ec4433cdd86218cfdc6d8c9 243 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 8 22 - T 11-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 syc1242_c 6feb23628ec4433cdd86218cfdc6d8c9 243 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 4 209 1.5E-41 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 syc1242_c 6feb23628ec4433cdd86218cfdc6d8c9 243 SUPERFAMILY SSF53790 1 235 1.26E-62 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 syc1242_c 6feb23628ec4433cdd86218cfdc6d8c9 243 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 83 116 - T 11-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 syc0598_c 5f2def23b3d5d3cf7772e5baac7f4385 412 Gene3D G3DSA:3.40.1190.10 1 279 3.6E-91 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 syc0598_c 5f2def23b3d5d3cf7772e5baac7f4385 412 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 134 149 - T 11-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 syc0598_c 5f2def23b3d5d3cf7772e5baac7f4385 412 SUPERFAMILY SSF53623 6 278 1.04E-85 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 syc0598_c 5f2def23b3d5d3cf7772e5baac7f4385 412 SUPERFAMILY SSF53244 280 409 7.88E-26 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 syc0598_c 5f2def23b3d5d3cf7772e5baac7f4385 412 PIRSF PIRSF001563 1 412 2.4E-122 T 11-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 syc0598_c 5f2def23b3d5d3cf7772e5baac7f4385 412 Gene3D G3DSA:3.90.190.20 280 411 1.5E-25 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 syc0598_c 5f2def23b3d5d3cf7772e5baac7f4385 412 Pfam PF02875 Mur ligase family, glutamate ligase domain 278 333 4.6E-6 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 syc0598_c 5f2def23b3d5d3cf7772e5baac7f4385 412 Pfam PF08245 Mur ligase middle domain 44 185 3.1E-6 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 syc0598_c 5f2def23b3d5d3cf7772e5baac7f4385 412 TIGRFAM TIGR01499 folC: bifunctional protein FolC 22 406 3.0E-105 T 11-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 syc1587_d cb26cd7dc09411c15cfea116d3807c10 236 SUPERFAMILY SSF102405 39 221 2.44E-40 T 11-10-2018 syc1587_d cb26cd7dc09411c15cfea116d3807c10 236 Gene3D G3DSA:3.40.50.450 33 234 3.2E-47 T 11-10-2018 syc1587_d cb26cd7dc09411c15cfea116d3807c10 236 Pfam PF03641 Possible lysine decarboxylase 85 217 2.9E-18 T 11-10-2018 IPR031100 LOG family syc2278_d e818c06eaa75e5ecb98bb18ea696487b 977 Gene3D G3DSA:1.20.1480.50 356 446 1.9E-9 T 11-10-2018 syc2278_d e818c06eaa75e5ecb98bb18ea696487b 977 Gene3D G3DSA:3.30.450.20 215 347 3.3E-8 T 11-10-2018 syc2278_d e818c06eaa75e5ecb98bb18ea696487b 977 SUPERFAMILY SSF55874 535 705 6.68E-50 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily syc2278_d e818c06eaa75e5ecb98bb18ea696487b 977 Gene3D G3DSA:1.10.287.130 447 544 6.7E-28 T 11-10-2018 syc2278_d e818c06eaa75e5ecb98bb18ea696487b 977 SMART SM00304 392 444 2.3E-9 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 syc2278_d e818c06eaa75e5ecb98bb18ea696487b 977 Gene3D G3DSA:3.40.50.12740 734 852 3.7E-35 T 11-10-2018 syc2278_d e818c06eaa75e5ecb98bb18ea696487b 977 Gene3D G3DSA:3.40.50.12740 854 977 6.1E-30 T 11-10-2018 syc2278_d e818c06eaa75e5ecb98bb18ea696487b 977 Pfam PF17201 Cache 3/Cache 2 fusion domain 35 362 7.6E-75 T 11-10-2018 IPR033462 Cache 3/Cache 2 fusion domain syc2278_d e818c06eaa75e5ecb98bb18ea696487b 977 SMART SM00448 733 843 2.8E-30 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 syc2278_d e818c06eaa75e5ecb98bb18ea696487b 977 SMART SM00448 853 969 8.4E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 syc2278_d e818c06eaa75e5ecb98bb18ea696487b 977 SUPERFAMILY SSF103190 132 237 3.66E-11 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily syc2278_d e818c06eaa75e5ecb98bb18ea696487b 977 SUPERFAMILY SSF52172 855 972 1.99E-27 T 11-10-2018 IPR011006 CheY-like superfamily syc2278_d e818c06eaa75e5ecb98bb18ea696487b 977 Pfam PF00672 HAMP domain 397 440 5.1E-10 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 syc2278_d e818c06eaa75e5ecb98bb18ea696487b 977 SUPERFAMILY SSF47384 463 547 1.43E-21 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 syc2278_d e818c06eaa75e5ecb98bb18ea696487b 977 Pfam PF00072 Response regulator receiver domain 856 969 4.3E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 syc2278_d e818c06eaa75e5ecb98bb18ea696487b 977 Pfam PF00072 Response regulator receiver domain 735 843 4.0E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 syc2278_d e818c06eaa75e5ecb98bb18ea696487b 977 Pfam PF00512 His Kinase A (phospho-acceptor) domain 477 546 2.6E-17 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 syc2278_d e818c06eaa75e5ecb98bb18ea696487b 977 Gene3D G3DSA:3.30.565.10 545 705 1.0E-49 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily syc2278_d e818c06eaa75e5ecb98bb18ea696487b 977 SUPERFAMILY SSF52172 733 847 1.99E-32 T 11-10-2018 IPR011006 CheY-like superfamily syc2278_d e818c06eaa75e5ecb98bb18ea696487b 977 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 593 701 3.3E-30 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase syc2278_d e818c06eaa75e5ecb98bb18ea696487b 977 SMART SM00387 592 703 2.1E-40 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase syc2278_d e818c06eaa75e5ecb98bb18ea696487b 977 PRINTS PR00344 Bacterial sensor protein C-terminal signature 687 700 5.0E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 syc2278_d e818c06eaa75e5ecb98bb18ea696487b 977 PRINTS PR00344 Bacterial sensor protein C-terminal signature 646 656 5.0E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 syc2278_d e818c06eaa75e5ecb98bb18ea696487b 977 PRINTS PR00344 Bacterial sensor protein C-terminal signature 628 642 5.0E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 syc2278_d e818c06eaa75e5ecb98bb18ea696487b 977 PRINTS PR00344 Bacterial sensor protein C-terminal signature 663 681 5.0E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 syc2278_d e818c06eaa75e5ecb98bb18ea696487b 977 SMART SM00388 477 546 7.7E-22 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 syc2278_d e818c06eaa75e5ecb98bb18ea696487b 977 SUPERFAMILY SSF158472 397 442 3.53E-8 T 11-10-2018 syc0913_c 075bab51343caa808943fa0b0a888035 796 Gene3D G3DSA:1.10.1420.10 74 282 2.7E-6 T 11-10-2018 syc0913_c 075bab51343caa808943fa0b0a888035 796 Pfam PF01713 Smr domain 725 791 4.6E-14 T 11-10-2018 IPR002625 Smr domain syc0913_c 075bab51343caa808943fa0b0a888035 796 Pfam PF00488 MutS domain V 342 523 1.7E-30 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 syc0913_c 075bab51343caa808943fa0b0a888035 796 SUPERFAMILY SSF160443 722 793 5.75E-7 T 11-10-2018 IPR036063 Smr domain superfamily syc0913_c 075bab51343caa808943fa0b0a888035 796 SMART SM00463 721 795 2.4E-10 T 11-10-2018 IPR002625 Smr domain syc0913_c 075bab51343caa808943fa0b0a888035 796 SMART SM00533 15 317 1.9E-19 T 11-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 syc0913_c 075bab51343caa808943fa0b0a888035 796 TIGRFAM TIGR01069 mutS2: MutS2 family protein 8 793 2.9E-237 T 11-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 syc0913_c 075bab51343caa808943fa0b0a888035 796 SUPERFAMILY SSF48334 71 287 1.96E-19 T 11-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily syc0913_c 075bab51343caa808943fa0b0a888035 796 Gene3D G3DSA:3.30.1370.110 718 795 1.2E-15 T 11-10-2018 syc0913_c 075bab51343caa808943fa0b0a888035 796 SMART SM00534 337 524 4.2E-70 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 syc0913_c 075bab51343caa808943fa0b0a888035 796 Hamap MF_00092 Endonuclease MutS2 [mutS2]. 8 794 18.838 T 11-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 syc0913_c 075bab51343caa808943fa0b0a888035 796 PIRSF PIRSF005814 5 795 1.7E-242 T 11-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 syc0913_c 075bab51343caa808943fa0b0a888035 796 SUPERFAMILY SSF52540 295 524 3.94E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0913_c 075bab51343caa808943fa0b0a888035 796 Gene3D G3DSA:1.10.1420.10 118 227 2.7E-6 T 11-10-2018 syc0913_c 075bab51343caa808943fa0b0a888035 796 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 421 437 - T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 syc0913_c 075bab51343caa808943fa0b0a888035 796 Gene3D G3DSA:3.40.50.300 294 609 3.4E-73 T 11-10-2018 syc1234_c f55c91bf8d64397a8c7d7c9fdaf6bf01 534 SUPERFAMILY SSF52833 20 96 8.28E-16 T 11-10-2018 IPR036249 Thioredoxin-like superfamily syc1234_c f55c91bf8d64397a8c7d7c9fdaf6bf01 534 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 440 522 1.1E-30 T 11-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc1234_c f55c91bf8d64397a8c7d7c9fdaf6bf01 534 SUPERFAMILY SSF142984 353 433 9.02E-22 T 11-10-2018 syc1234_c f55c91bf8d64397a8c7d7c9fdaf6bf01 534 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 160 331 2.8E-49 T 11-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc1234_c f55c91bf8d64397a8c7d7c9fdaf6bf01 534 Gene3D G3DSA:3.40.50.11540 165 343 2.0E-78 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc1234_c f55c91bf8d64397a8c7d7c9fdaf6bf01 534 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 451 462 - T 11-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc1234_c f55c91bf8d64397a8c7d7c9fdaf6bf01 534 Gene3D G3DSA:3.10.20.600 344 435 4.8E-29 T 11-10-2018 syc1234_c f55c91bf8d64397a8c7d7c9fdaf6bf01 534 SUPERFAMILY SSF142019 111 352 3.4E-89 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc1234_c f55c91bf8d64397a8c7d7c9fdaf6bf01 534 Gene3D G3DSA:1.20.1440.230 436 531 2.0E-31 T 11-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc1234_c f55c91bf8d64397a8c7d7c9fdaf6bf01 534 SUPERFAMILY SSF140490 434 526 1.12E-33 T 11-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc1234_c f55c91bf8d64397a8c7d7c9fdaf6bf01 534 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 20 95 9.6E-7 T 11-10-2018 syc1234_c f55c91bf8d64397a8c7d7c9fdaf6bf01 534 SMART SM00928 438 483 4.3E-21 T 11-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc1234_c f55c91bf8d64397a8c7d7c9fdaf6bf01 534 Gene3D G3DSA:3.40.30.10 16 102 2.2E-14 T 11-10-2018 syc1744_c e7e57a81c929335d466572d098d2e6c5 460 Pfam PF00999 Sodium/hydrogen exchanger family 40 444 7.9E-70 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 syc1727_c 8f7008f36a45d29488d9abbfddc6536d 393 Gene3D G3DSA:3.40.50.1440 34 245 4.8E-80 T 11-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 syc1727_c 8f7008f36a45d29488d9abbfddc6536d 393 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 30 356 1.2E-137 T 11-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 syc1727_c 8f7008f36a45d29488d9abbfddc6536d 393 PRINTS PR00423 Cell division protein FtsZ signature 215 237 6.9E-53 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 syc1727_c 8f7008f36a45d29488d9abbfddc6536d 393 PRINTS PR00423 Cell division protein FtsZ signature 238 259 6.9E-53 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 syc1727_c 8f7008f36a45d29488d9abbfddc6536d 393 PRINTS PR00423 Cell division protein FtsZ signature 152 173 6.9E-53 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 syc1727_c 8f7008f36a45d29488d9abbfddc6536d 393 PRINTS PR00423 Cell division protein FtsZ signature 124 144 6.9E-53 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 syc1727_c 8f7008f36a45d29488d9abbfddc6536d 393 ProSitePatterns PS01134 FtsZ protein signature 1. 70 104 - T 11-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 syc1727_c 8f7008f36a45d29488d9abbfddc6536d 393 Gene3D G3DSA:3.30.1330.20 247 354 2.9E-40 T 11-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 syc1727_c 8f7008f36a45d29488d9abbfddc6536d 393 SUPERFAMILY SSF52490 38 234 6.93E-70 T 11-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 syc1727_c 8f7008f36a45d29488d9abbfddc6536d 393 ProSitePatterns PS01135 FtsZ protein signature 2. 123 144 - T 11-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 syc1727_c 8f7008f36a45d29488d9abbfddc6536d 393 Pfam PF12327 FtsZ family, C-terminal domain 248 341 1.6E-37 T 11-10-2018 IPR024757 Cell division protein FtsZ, C-terminal syc1727_c 8f7008f36a45d29488d9abbfddc6536d 393 SMART SM00864 39 231 2.5E-112 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 syc1727_c 8f7008f36a45d29488d9abbfddc6536d 393 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 35 370 38.639 T 11-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 syc1727_c 8f7008f36a45d29488d9abbfddc6536d 393 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 39 198 4.6E-39 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 syc1727_c 8f7008f36a45d29488d9abbfddc6536d 393 SUPERFAMILY SSF55307 230 344 6.41E-44 T 11-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 syc1727_c 8f7008f36a45d29488d9abbfddc6536d 393 SMART SM00865 233 350 3.3E-56 T 11-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 syc0060_d 46db3cbf63c0721a8494b41cac06ecd6 317 Pfam PF13354 Beta-lactamase enzyme family 75 276 1.4E-63 T 11-10-2018 syc0060_d 46db3cbf63c0721a8494b41cac06ecd6 317 SUPERFAMILY SSF56601 52 303 1.06E-59 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like syc0060_d 46db3cbf63c0721a8494b41cac06ecd6 317 Gene3D G3DSA:3.40.710.10 47 306 1.1E-73 T 11-10-2018 syc1224_d 7a891b9b91bf8a7890de53ff7b0eff4f 452 SUPERFAMILY SSF53448 1 249 7.44E-55 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases syc1224_d 7a891b9b91bf8a7890de53ff7b0eff4f 452 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 1 448 39.562 T 11-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 syc1224_d 7a891b9b91bf8a7890de53ff7b0eff4f 452 Gene3D G3DSA:3.90.550.10 1 224 5.1E-56 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases syc1224_d 7a891b9b91bf8a7890de53ff7b0eff4f 452 SUPERFAMILY SSF51161 251 441 1.42E-49 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily syc1224_d 7a891b9b91bf8a7890de53ff7b0eff4f 452 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 3 449 1.7E-174 T 11-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 syc1224_d 7a891b9b91bf8a7890de53ff7b0eff4f 452 Pfam PF12804 MobA-like NTP transferase domain 5 132 9.3E-22 T 11-10-2018 IPR025877 MobA-like NTP transferase syc1224_d 7a891b9b91bf8a7890de53ff7b0eff4f 452 Gene3D G3DSA:2.160.10.10 225 451 1.2E-67 T 11-10-2018 syc1224_d 7a891b9b91bf8a7890de53ff7b0eff4f 452 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 314 347 3.6E-6 T 11-10-2018 IPR001451 Hexapeptide repeat syc1224_d 7a891b9b91bf8a7890de53ff7b0eff4f 452 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 391 425 8.9E-9 T 11-10-2018 IPR001451 Hexapeptide repeat syc1224_d 7a891b9b91bf8a7890de53ff7b0eff4f 452 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 263 297 4.1E-8 T 11-10-2018 IPR001451 Hexapeptide repeat syc1336_d 0979d79b3d544e3b5baee1eb087a3d7c 289 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 229 243 - T 11-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 syc1336_d 0979d79b3d544e3b5baee1eb087a3d7c 289 Pfam PF00459 Inositol monophosphatase family 13 281 2.3E-50 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 syc1336_d 0979d79b3d544e3b5baee1eb087a3d7c 289 SUPERFAMILY SSF56655 13 279 1.7E-64 T 11-10-2018 syc1336_d 0979d79b3d544e3b5baee1eb087a3d7c 289 Gene3D G3DSA:3.30.540.10 11 166 4.3E-35 T 11-10-2018 syc1336_d 0979d79b3d544e3b5baee1eb087a3d7c 289 Gene3D G3DSA:3.40.190.80 167 287 6.5E-26 T 11-10-2018 syc1336_d 0979d79b3d544e3b5baee1eb087a3d7c 289 PRINTS PR00377 Inositol monophosphatase superfamily signature 226 250 1.7E-11 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 syc1336_d 0979d79b3d544e3b5baee1eb087a3d7c 289 PRINTS PR00377 Inositol monophosphatase superfamily signature 98 114 1.7E-11 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 syc1336_d 0979d79b3d544e3b5baee1eb087a3d7c 289 PRINTS PR00377 Inositol monophosphatase superfamily signature 50 70 1.7E-11 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 syc0145_d e6baf016edc5780f6cae8f250be1396a 540 SMART SM00917 388 519 2.8E-40 T 11-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 syc0145_d e6baf016edc5780f6cae8f250be1396a 540 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 207 220 - T 11-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 syc0145_d e6baf016edc5780f6cae8f250be1396a 540 SUPERFAMILY SSF110921 413 518 1.27E-20 T 11-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 syc0145_d e6baf016edc5780f6cae8f250be1396a 540 Pfam PF00682 HMGL-like 10 292 3.0E-97 T 11-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 syc0145_d e6baf016edc5780f6cae8f250be1396a 540 SUPERFAMILY SSF51569 6 310 2.93E-94 T 11-10-2018 syc0145_d e6baf016edc5780f6cae8f250be1396a 540 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 17 33 - T 11-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 syc0145_d e6baf016edc5780f6cae8f250be1396a 540 Gene3D G3DSA:3.30.160.270 412 520 2.1E-6 T 11-10-2018 syc0145_d e6baf016edc5780f6cae8f250be1396a 540 Gene3D G3DSA:1.10.238.260 300 411 6.2E-37 T 11-10-2018 syc0145_d e6baf016edc5780f6cae8f250be1396a 540 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 7 528 42.804 T 11-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 syc0145_d e6baf016edc5780f6cae8f250be1396a 540 Pfam PF08502 LeuA allosteric (dimerisation) domain 388 518 8.6E-39 T 11-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 syc0145_d e6baf016edc5780f6cae8f250be1396a 540 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 9 516 5.0E-234 T 11-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 syc0145_d e6baf016edc5780f6cae8f250be1396a 540 Gene3D G3DSA:3.20.20.70 6 295 1.0E-103 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 syc0512_d 8bfc14fff8b62e70c249f4195be43401 264 SUPERFAMILY SSF56235 2 241 2.85E-36 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal syc0512_d 8bfc14fff8b62e70c249f4195be43401 264 Gene3D G3DSA:3.60.20.10 2 218 1.3E-28 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal syc0512_d 8bfc14fff8b62e70c249f4195be43401 264 PIRSF PIRSF009120 1 250 6.2E-109 T 11-10-2018 IPR016545 Uncharacterised conserved protein UCP009120, proteasome-type protease, Sll0069 syc0512_d 8bfc14fff8b62e70c249f4195be43401 264 Pfam PF00227 Proteasome subunit 4 185 2.6E-8 T 11-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 syc0984_c 7b7890d2ecaf647e8d8c8fbc5f0f5912 417 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 7 413 8.3E-198 T 11-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 syc0984_c 7b7890d2ecaf647e8d8c8fbc5f0f5912 417 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 158 174 - T 11-10-2018 IPR018201 Beta-ketoacyl synthase, active site syc0984_c 7b7890d2ecaf647e8d8c8fbc5f0f5912 417 SMART SM00825 Beta-ketoacyl synthase 9 406 5.6E-16 T 11-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain syc0984_c 7b7890d2ecaf647e8d8c8fbc5f0f5912 417 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 7 250 3.7E-61 T 11-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal syc0984_c 7b7890d2ecaf647e8d8c8fbc5f0f5912 417 SUPERFAMILY SSF53901 217 415 4.02E-76 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 syc0984_c 7b7890d2ecaf647e8d8c8fbc5f0f5912 417 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 258 372 1.7E-36 T 11-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal syc0984_c 7b7890d2ecaf647e8d8c8fbc5f0f5912 417 PIRSF PIRSF000447 4 417 2.7E-195 T 11-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 syc0984_c 7b7890d2ecaf647e8d8c8fbc5f0f5912 417 SUPERFAMILY SSF53901 7 255 2.71E-81 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 syc0984_c 7b7890d2ecaf647e8d8c8fbc5f0f5912 417 Gene3D G3DSA:3.40.47.10 260 404 3.7E-56 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 syc0984_c 7b7890d2ecaf647e8d8c8fbc5f0f5912 417 Gene3D G3DSA:3.40.47.10 1 259 4.8E-101 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 syc1381_d ea538c1409d22cd9d86e99bd19ee9ade 525 SUPERFAMILY SSF141868 273 517 2.22E-74 T 11-10-2018 IPR035919 EAL domain superfamily syc1381_d ea538c1409d22cd9d86e99bd19ee9ade 525 Pfam PF12792 CSS motif domain associated with EAL 37 239 1.9E-30 T 11-10-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain syc1381_d ea538c1409d22cd9d86e99bd19ee9ade 525 Pfam PF00563 EAL domain 273 504 8.1E-65 T 11-10-2018 IPR001633 EAL domain syc1381_d ea538c1409d22cd9d86e99bd19ee9ade 525 SMART SM00052 265 509 2.5E-94 T 11-10-2018 IPR001633 EAL domain syc1381_d ea538c1409d22cd9d86e99bd19ee9ade 525 Gene3D G3DSA:3.20.20.450 265 520 1.7E-78 T 11-10-2018 IPR035919 EAL domain superfamily syc2407_c 7abe92a5d8f09e946ce70319f5116fd2 81 SMART SM00930 2 76 6.5E-11 T 11-10-2018 IPR018449 NIL domain syc2407_c 7abe92a5d8f09e946ce70319f5116fd2 81 SUPERFAMILY SSF55021 4 72 1.26E-10 T 11-10-2018 syc2407_c 7abe92a5d8f09e946ce70319f5116fd2 81 Pfam PF09383 NIL domain 5 72 2.2E-11 T 11-10-2018 IPR018449 NIL domain syc0612_c c3e950ec2ddb2d1f22f81f053233e55c 155 SUPERFAMILY SSF54637 18 151 1.94E-45 T 11-10-2018 IPR029069 HotDog domain superfamily syc0612_c c3e950ec2ddb2d1f22f81f053233e55c 155 Pfam PF07977 FabA-like domain 24 146 1.8E-33 T 11-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 syc0612_c c3e950ec2ddb2d1f22f81f053233e55c 155 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 16 152 9.5E-56 T 11-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 syc0612_c c3e950ec2ddb2d1f22f81f053233e55c 155 Gene3D G3DSA:3.10.129.10 13 155 1.1E-55 T 11-10-2018 syc0612_c c3e950ec2ddb2d1f22f81f053233e55c 155 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 15 155 33.056 T 11-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 syc2047_c 16ded6105e5766dd57089d988eed1042 129 SUPERFAMILY SSF51230 5 127 3.14E-40 T 11-10-2018 IPR011053 Single hybrid motif syc2047_c 16ded6105e5766dd57089d988eed1042 129 Pfam PF01597 Glycine cleavage H-protein 9 127 2.2E-38 T 11-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate syc2047_c 16ded6105e5766dd57089d988eed1042 129 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 49 78 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 syc2047_c 16ded6105e5766dd57089d988eed1042 129 Gene3D G3DSA:2.40.50.100 2 127 2.2E-42 T 11-10-2018 syc2047_c 16ded6105e5766dd57089d988eed1042 129 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 6 127 1.9E-44 T 11-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 syc2047_c 16ded6105e5766dd57089d988eed1042 129 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 6 127 36.286 T 11-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 syc0351_d adbd84cbaa49f2b8dd2e66b568ce851c 258 SUPERFAMILY SSF75217 104 257 1.9E-45 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases syc0351_d adbd84cbaa49f2b8dd2e66b568ce851c 258 Gene3D G3DSA:3.30.1330.30 1 100 1.0E-20 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like syc0351_d adbd84cbaa49f2b8dd2e66b568ce851c 258 SUPERFAMILY SSF55315 1 99 2.0E-23 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like syc0351_d adbd84cbaa49f2b8dd2e66b568ce851c 258 SMART SM00967 29 102 2.0E-11 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 syc0351_d adbd84cbaa49f2b8dd2e66b568ce851c 258 Gene3D G3DSA:3.40.1280.10 104 258 5.7E-52 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal syc0351_d adbd84cbaa49f2b8dd2e66b568ce851c 258 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 29 98 4.6E-7 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 syc0351_d adbd84cbaa49f2b8dd2e66b568ce851c 258 Pfam PF00588 SpoU rRNA Methylase family 110 250 1.3E-37 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 syc2270_d 6d9718e6959cd5df373ab36fc280bd9e 154 Gene3D G3DSA:3.10.580.10 1 153 3.6E-40 T 11-10-2018 syc2270_d 6d9718e6959cd5df373ab36fc280bd9e 154 SMART SM00116 103 151 4.7E-8 T 11-10-2018 IPR000644 CBS domain syc2270_d 6d9718e6959cd5df373ab36fc280bd9e 154 SMART SM00116 12 60 8.0E-10 T 11-10-2018 IPR000644 CBS domain syc2270_d 6d9718e6959cd5df373ab36fc280bd9e 154 SUPERFAMILY SSF54631 3 151 2.4E-39 T 11-10-2018 syc2270_d 6d9718e6959cd5df373ab36fc280bd9e 154 Pfam PF00571 CBS domain 5 56 3.7E-17 T 11-10-2018 IPR000644 CBS domain syc2270_d 6d9718e6959cd5df373ab36fc280bd9e 154 Pfam PF00571 CBS domain 96 151 3.2E-13 T 11-10-2018 IPR000644 CBS domain syc2437_c bc41b075d9dbfac1ca269e9fd3690323 238 ProSitePatterns PS00202 Rubredoxin signature. 212 222 - T 11-10-2018 IPR018527 Rubredoxin, iron-binding site GO:0046872 syc2437_c bc41b075d9dbfac1ca269e9fd3690323 238 Pfam PF00301 Rubredoxin 182 228 1.5E-20 T 11-10-2018 IPR024935 Rubredoxin domain GO:0005506 syc2437_c bc41b075d9dbfac1ca269e9fd3690323 238 Gene3D G3DSA:2.20.28.10 179 234 9.7E-23 T 11-10-2018 syc2437_c bc41b075d9dbfac1ca269e9fd3690323 238 Pfam PF02915 Rubrerythrin 11 138 7.9E-15 T 11-10-2018 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 syc2437_c bc41b075d9dbfac1ca269e9fd3690323 238 SUPERFAMILY SSF57802 180 233 1.41E-19 T 11-10-2018 syc2437_c bc41b075d9dbfac1ca269e9fd3690323 238 PRINTS PR00163 Rubredoxin signature 182 198 6.2E-9 T 11-10-2018 IPR024935 Rubredoxin domain GO:0005506 syc2437_c bc41b075d9dbfac1ca269e9fd3690323 238 PRINTS PR00163 Rubredoxin signature 212 228 6.2E-9 T 11-10-2018 IPR024935 Rubredoxin domain GO:0005506 syc2437_c bc41b075d9dbfac1ca269e9fd3690323 238 SUPERFAMILY SSF47240 4 144 4.99E-32 T 11-10-2018 IPR009078 Ferritin-like superfamily syc2437_c bc41b075d9dbfac1ca269e9fd3690323 238 Gene3D G3DSA:1.20.1260.10 1 144 3.4E-34 T 11-10-2018 IPR012347 Ferritin-like syc1562_c ae6bec635a25940033a3037a74761f04 202 Gene3D G3DSA:3.20.19.10 1 170 1.4E-48 T 11-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 syc1562_c ae6bec635a25940033a3037a74761f04 202 Pfam PF00694 Aconitase C-terminal domain 6 113 4.8E-17 T 11-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 syc1562_c ae6bec635a25940033a3037a74761f04 202 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 4 151 1.2E-34 T 11-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 syc1562_c ae6bec635a25940033a3037a74761f04 202 SUPERFAMILY SSF52016 8 176 6.87E-44 T 11-10-2018 syc1241_c ce28010392d95d310d9db1c54249cd1b 264 Gene3D G3DSA:3.40.50.10090 11 236 3.7E-46 T 11-10-2018 syc1241_c ce28010392d95d310d9db1c54249cd1b 264 Gene3D G3DSA:3.40.50.10090 40 173 3.7E-46 T 11-10-2018 syc1241_c ce28010392d95d310d9db1c54249cd1b 264 SUPERFAMILY SSF69618 8 261 9.81E-64 T 11-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 syc1241_c ce28010392d95d310d9db1c54249cd1b 264 Pfam PF02602 Uroporphyrinogen-III synthase HemD 22 253 3.6E-48 T 11-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 syc1961_d e75bedd50f1a24e4a734afe80581ff31 690 SUPERFAMILY SSF48435 78 506 2.35E-24 T 11-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 syc1961_d e75bedd50f1a24e4a734afe80581ff31 690 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 554 582 - T 11-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 syc1961_d e75bedd50f1a24e4a734afe80581ff31 690 Pfam PF01464 Transglycosylase SLT domain 537 648 2.1E-28 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 syc1961_d e75bedd50f1a24e4a734afe80581ff31 690 Gene3D G3DSA:1.10.530.10 527 686 1.7E-46 T 11-10-2018 syc1961_d e75bedd50f1a24e4a734afe80581ff31 690 SUPERFAMILY SSF53955 535 678 7.13E-44 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily syc1961_d e75bedd50f1a24e4a734afe80581ff31 690 Pfam PF13174 Tetratricopeptide repeat 385 416 0.013 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc1961_d e75bedd50f1a24e4a734afe80581ff31 690 Pfam PF13174 Tetratricopeptide repeat 253 284 1.4E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc1961_d e75bedd50f1a24e4a734afe80581ff31 690 Gene3D G3DSA:1.25.40.10 328 427 6.9E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc1194_c d66b562e09f4bfaed0c434e908e2be42 272 Gene3D G3DSA:3.10.290.10 1 61 2.6E-22 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 syc1194_c d66b562e09f4bfaed0c434e908e2be42 272 TIGRFAM TIGR00478 tly: TlyA family rRNA methyltransferase/putative hemolysin 5 239 2.4E-85 T 11-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 syc1194_c d66b562e09f4bfaed0c434e908e2be42 272 SMART SM00363 4 68 8.7E-11 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc1194_c d66b562e09f4bfaed0c434e908e2be42 272 SUPERFAMILY SSF55174 4 70 2.5E-15 T 11-10-2018 syc1194_c d66b562e09f4bfaed0c434e908e2be42 272 Gene3D G3DSA:3.40.50.150 62 271 6.5E-75 T 11-10-2018 syc1194_c d66b562e09f4bfaed0c434e908e2be42 272 Pfam PF01479 S4 domain 5 51 6.4E-12 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc1194_c d66b562e09f4bfaed0c434e908e2be42 272 PIRSF PIRSF005578 1 265 9.4E-99 T 11-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 syc1194_c d66b562e09f4bfaed0c434e908e2be42 272 SUPERFAMILY SSF53335 58 244 8.14E-20 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase syc1194_c d66b562e09f4bfaed0c434e908e2be42 272 Pfam PF01728 FtsJ-like methyltransferase 59 243 1.4E-17 T 11-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 syc1395_c 5c86dc64c23403a371dd0bd46ddfa4d3 182 ProSitePatterns PS00818 Dps protein family signature 1. 63 79 - T 11-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 syc1395_c 5c86dc64c23403a371dd0bd46ddfa4d3 182 PIRSF PIRSF005900 20 182 3.2E-45 T 11-10-2018 IPR002177 DNA-binding protein Dps syc1395_c 5c86dc64c23403a371dd0bd46ddfa4d3 182 Pfam PF00210 Ferritin-like domain 44 181 6.8E-27 T 11-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 syc1395_c 5c86dc64c23403a371dd0bd46ddfa4d3 182 SUPERFAMILY SSF47240 30 181 2.55E-47 T 11-10-2018 IPR009078 Ferritin-like superfamily syc1395_c 5c86dc64c23403a371dd0bd46ddfa4d3 182 Gene3D G3DSA:1.20.1260.10 16 182 7.7E-58 T 11-10-2018 IPR012347 Ferritin-like syc1395_c 5c86dc64c23403a371dd0bd46ddfa4d3 182 ProSitePatterns PS00819 Dps protein family signature 2. 89 103 - T 11-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 syc1395_c 5c86dc64c23403a371dd0bd46ddfa4d3 182 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 63 79 1.4E-10 T 11-10-2018 IPR002177 DNA-binding protein Dps syc1395_c 5c86dc64c23403a371dd0bd46ddfa4d3 182 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 87 103 1.4E-10 T 11-10-2018 IPR002177 DNA-binding protein Dps syc1395_c 5c86dc64c23403a371dd0bd46ddfa4d3 182 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 158 176 1.4E-10 T 11-10-2018 IPR002177 DNA-binding protein Dps syc0328_c b8e85bde6ad9efaeb5c6cc813e2dc42c 294 SUPERFAMILY SSF55120 4 238 3.17E-72 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 syc0328_c b8e85bde6ad9efaeb5c6cc813e2dc42c 294 Gene3D G3DSA:3.30.2350.10 1 235 3.1E-80 T 11-10-2018 syc0328_c b8e85bde6ad9efaeb5c6cc813e2dc42c 294 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 177 217 9.3E-10 T 11-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 syc0328_c b8e85bde6ad9efaeb5c6cc813e2dc42c 294 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 235 290 1.4E-14 T 11-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 syc0328_c b8e85bde6ad9efaeb5c6cc813e2dc42c 294 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 3 291 17.57 T 11-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 syc0328_c b8e85bde6ad9efaeb5c6cc813e2dc42c 294 Gene3D G3DSA:2.30.130.10 236 292 3.0E-5 T 11-10-2018 IPR036974 PUA domain superfamily GO:0003723 syc0328_c b8e85bde6ad9efaeb5c6cc813e2dc42c 294 SUPERFAMILY SSF88697 234 290 4.37E-6 T 11-10-2018 IPR015947 PUA-like superfamily syc0328_c b8e85bde6ad9efaeb5c6cc813e2dc42c 294 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 4 215 3.4E-69 T 11-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 syc0328_c b8e85bde6ad9efaeb5c6cc813e2dc42c 294 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 25 176 1.2E-49 T 11-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 syc1366_c da94760c83b62eec23856df2f6ef88bd 612 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 13 575 2.1E-262 T 11-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 syc1366_c da94760c83b62eec23856df2f6ef88bd 612 SUPERFAMILY SSF52518 6 193 9.2E-64 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold syc1366_c da94760c83b62eec23856df2f6ef88bd 612 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 207 342 1.4E-51 T 11-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 syc1366_c da94760c83b62eec23856df2f6ef88bd 612 SUPERFAMILY SSF52467 200 374 2.46E-64 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily syc1366_c da94760c83b62eec23856df2f6ef88bd 612 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 13 182 1.5E-57 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 syc1366_c da94760c83b62eec23856df2f6ef88bd 612 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 440 459 - T 11-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 syc1366_c da94760c83b62eec23856df2f6ef88bd 612 SUPERFAMILY SSF52518 383 578 1.7E-69 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold syc1366_c da94760c83b62eec23856df2f6ef88bd 612 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 404 551 6.1E-53 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 syc1366_c da94760c83b62eec23856df2f6ef88bd 612 Gene3D G3DSA:3.40.50.970 2 186 3.2E-69 T 11-10-2018 syc1366_c da94760c83b62eec23856df2f6ef88bd 612 Gene3D G3DSA:3.40.50.970 379 581 2.9E-69 T 11-10-2018 syc1366_c da94760c83b62eec23856df2f6ef88bd 612 Gene3D G3DSA:3.40.50.1220 202 372 1.4E-66 T 11-10-2018 syc1723_d d15d034dcf271f1d6d9f2162c92e2098 396 Pfam PF04055 Radical SAM superfamily 11 184 6.0E-16 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 syc1723_d d15d034dcf271f1d6d9f2162c92e2098 396 SUPERFAMILY SSF102114 5 388 6.28E-104 T 11-10-2018 syc1723_d d15d034dcf271f1d6d9f2162c92e2098 396 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 7 343 4.8E-80 T 11-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 syc1723_d d15d034dcf271f1d6d9f2162c92e2098 396 Pfam PF06969 HemN C-terminal domain 312 372 1.1E-14 T 11-10-2018 IPR010723 HemN, C-terminal syc1723_d d15d034dcf271f1d6d9f2162c92e2098 396 Gene3D G3DSA:3.80.30.20 2 304 4.1E-103 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe syc1723_d d15d034dcf271f1d6d9f2162c92e2098 396 SMART SM00729 5 230 4.0E-51 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 syc1743_c 526ac729898908a89a9660a2f25fd799 344 Gene3D G3DSA:2.60.40.3500 16 129 2.1E-14 T 11-10-2018 syc1743_c 526ac729898908a89a9660a2f25fd799 344 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 168 338 3.8E-53 T 11-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 syc1743_c 526ac729898908a89a9660a2f25fd799 344 SMART SM00646 227 338 1.7E-46 T 11-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 syc1743_c 526ac729898908a89a9660a2f25fd799 344 SUPERFAMILY SSF53187 167 341 4.39E-56 T 11-10-2018 syc1743_c 526ac729898908a89a9660a2f25fd799 344 Gene3D G3DSA:3.40.630.40 163 343 2.5E-64 T 11-10-2018 syc1743_c 526ac729898908a89a9660a2f25fd799 344 Pfam PF11741 AMIN domain 30 126 9.7E-17 T 11-10-2018 IPR021731 AMIN domain syc0090_d 6e301ab25086cc899171d13ca4e06675 299 Gene3D G3DSA:1.25.40.10 162 264 4.5E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc0090_d 6e301ab25086cc899171d13ca4e06675 299 Gene3D G3DSA:1.25.40.10 98 161 4.4E-17 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc0090_d 6e301ab25086cc899171d13ca4e06675 299 Pfam PF13174 Tetratricopeptide repeat 128 157 0.0037 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc0090_d 6e301ab25086cc899171d13ca4e06675 299 SMART SM00028 165 198 450.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc0090_d 6e301ab25086cc899171d13ca4e06675 299 SMART SM00028 126 159 1.8E-6 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc0090_d 6e301ab25086cc899171d13ca4e06675 299 SMART SM00028 92 125 2.9E-6 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc0090_d 6e301ab25086cc899171d13ca4e06675 299 SMART SM00028 199 232 1.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc0090_d 6e301ab25086cc899171d13ca4e06675 299 SMART SM00028 58 91 1.7 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc0090_d 6e301ab25086cc899171d13ca4e06675 299 SUPERFAMILY SSF48452 29 157 1.33E-29 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc0090_d 6e301ab25086cc899171d13ca4e06675 299 SUPERFAMILY SSF48452 123 228 8.79E-17 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc0090_d 6e301ab25086cc899171d13ca4e06675 299 Pfam PF13432 Tetratricopeptide repeat 187 231 0.0059 T 11-10-2018 syc0090_d 6e301ab25086cc899171d13ca4e06675 299 Pfam PF13371 Tetratricopeptide repeat 71 127 9.1E-12 T 11-10-2018 syc0090_d 6e301ab25086cc899171d13ca4e06675 299 Gene3D G3DSA:1.25.40.10 30 97 3.4E-13 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc1039_c c0f832eb63cc36aa521788c4c36bd030 577 Gene3D G3DSA:1.10.287.130 330 403 5.8E-22 T 11-10-2018 syc1039_c c0f832eb63cc36aa521788c4c36bd030 577 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 449 571 2.3E-23 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase syc1039_c c0f832eb63cc36aa521788c4c36bd030 577 Pfam PF00512 His Kinase A (phospho-acceptor) domain 335 401 4.0E-19 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 syc1039_c c0f832eb63cc36aa521788c4c36bd030 577 Gene3D G3DSA:3.30.450.40 147 329 1.5E-21 T 11-10-2018 IPR029016 GAF-like domain superfamily syc1039_c c0f832eb63cc36aa521788c4c36bd030 577 SMART SM00065 165 301 1.9E-6 T 11-10-2018 IPR003018 GAF domain GO:0005515 syc1039_c c0f832eb63cc36aa521788c4c36bd030 577 SMART SM00388 334 401 7.8E-24 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 syc1039_c c0f832eb63cc36aa521788c4c36bd030 577 SUPERFAMILY SSF55874 390 570 3.67E-37 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily syc1039_c c0f832eb63cc36aa521788c4c36bd030 577 PRINTS PR00344 Bacterial sensor protein C-terminal signature 514 524 1.6E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 syc1039_c c0f832eb63cc36aa521788c4c36bd030 577 PRINTS PR00344 Bacterial sensor protein C-terminal signature 531 549 1.6E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 syc1039_c c0f832eb63cc36aa521788c4c36bd030 577 PRINTS PR00344 Bacterial sensor protein C-terminal signature 556 569 1.6E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 syc1039_c c0f832eb63cc36aa521788c4c36bd030 577 PRINTS PR00344 Bacterial sensor protein C-terminal signature 496 510 1.6E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 syc1039_c c0f832eb63cc36aa521788c4c36bd030 577 SUPERFAMILY SSF55785 28 126 1.41E-7 T 11-10-2018 IPR035965 PAS domain superfamily syc1039_c c0f832eb63cc36aa521788c4c36bd030 577 Pfam PF13492 GAF domain 165 293 5.2E-10 T 11-10-2018 IPR003018 GAF domain GO:0005515 syc1039_c c0f832eb63cc36aa521788c4c36bd030 577 Gene3D G3DSA:3.30.565.10 404 572 1.2E-40 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily syc1039_c c0f832eb63cc36aa521788c4c36bd030 577 SUPERFAMILY SSF55781 150 301 6.32E-15 T 11-10-2018 syc1039_c c0f832eb63cc36aa521788c4c36bd030 577 SMART SM00387 449 572 3.3E-30 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase syc1039_c c0f832eb63cc36aa521788c4c36bd030 577 SUPERFAMILY SSF47384 319 402 1.16E-21 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 syc0314_d d1836a02699eb82addaa06bb9c2cb0e0 274 TIGRFAM TIGR01184 ntrCD: nitrate ABC transporter, ATP-binding proteins C and D 36 265 6.6E-130 T 11-10-2018 IPR005890 Nitrate transport ATP-binding subunit C/D GO:0015112|GO:0015706|GO:0016020 syc0314_d d1836a02699eb82addaa06bb9c2cb0e0 274 Gene3D G3DSA:3.40.50.300 15 263 1.8E-64 T 11-10-2018 syc0314_d d1836a02699eb82addaa06bb9c2cb0e0 274 SUPERFAMILY SSF52540 17 242 4.84E-69 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0314_d d1836a02699eb82addaa06bb9c2cb0e0 274 SMART SM00382 45 227 3.1E-21 T 11-10-2018 IPR003593 AAA+ ATPase domain syc0314_d d1836a02699eb82addaa06bb9c2cb0e0 274 Pfam PF00005 ABC transporter 37 177 1.7E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 syc0314_d d1836a02699eb82addaa06bb9c2cb0e0 274 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 syc0473_d 9fde00715f2d50223db0e342b65ebf0d 138 Pfam PF10722 Putative bacterial sensory transduction regulator 16 131 1.8E-14 T 11-10-2018 IPR019660 Putative sensory transduction regulator YbjN syc0247_d 57ac5712f684375a4990f4d81c620ba7 186 Pfam PF11371 Protein of unknown function (DUF3172) 34 170 3.4E-67 T 11-10-2018 IPR021511 Protein of unknown function DUF3172 syc0165_d 6e72753ba90dea09ca4ed689611daaec 128 Gene3D G3DSA:3.30.428.10 13 128 1.5E-42 T 11-10-2018 IPR036265 HIT-like superfamily syc0165_d 6e72753ba90dea09ca4ed689611daaec 128 SUPERFAMILY SSF54197 15 127 2.47E-40 T 11-10-2018 IPR036265 HIT-like superfamily syc0165_d 6e72753ba90dea09ca4ed689611daaec 128 PRINTS PR00332 Histidine triad family signature 108 118 2.6E-21 T 11-10-2018 IPR001310 Histidine triad (HIT) protein syc0165_d 6e72753ba90dea09ca4ed689611daaec 128 PRINTS PR00332 Histidine triad family signature 41 59 2.6E-21 T 11-10-2018 IPR001310 Histidine triad (HIT) protein syc0165_d 6e72753ba90dea09ca4ed689611daaec 128 PRINTS PR00332 Histidine triad family signature 20 36 2.6E-21 T 11-10-2018 IPR001310 Histidine triad (HIT) protein syc0165_d 6e72753ba90dea09ca4ed689611daaec 128 ProSitePatterns PS00892 HIT domain signature. 101 119 - T 11-10-2018 IPR019808 Histidine triad, conserved site syc0165_d 6e72753ba90dea09ca4ed689611daaec 128 Pfam PF01230 HIT domain 26 122 2.2E-30 T 11-10-2018 IPR001310 Histidine triad (HIT) protein syc1735_c 225eb34a9c24febb599bdb0549bd1691 1056 SUPERFAMILY SSF82693 42 134 3.49E-25 T 11-10-2018 syc1735_c 225eb34a9c24febb599bdb0549bd1691 1056 Gene3D G3DSA:3.30.70.1440 673 872 1.7E-303 T 11-10-2018 syc1735_c 225eb34a9c24febb599bdb0549bd1691 1056 SUPERFAMILY SSF82866 837 1032 1.02E-42 T 11-10-2018 syc1735_c 225eb34a9c24febb599bdb0549bd1691 1056 SUPERFAMILY SSF82693 139 336 2.14E-22 T 11-10-2018 syc1735_c 225eb34a9c24febb599bdb0549bd1691 1056 PRINTS PR00702 Acriflavin resistance protein family signature 450 473 7.4E-91 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 syc1735_c 225eb34a9c24febb599bdb0549bd1691 1056 PRINTS PR00702 Acriflavin resistance protein family signature 342 365 7.4E-91 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 syc1735_c 225eb34a9c24febb599bdb0549bd1691 1056 PRINTS PR00702 Acriflavin resistance protein family signature 557 574 7.4E-91 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 syc1735_c 225eb34a9c24febb599bdb0549bd1691 1056 PRINTS PR00702 Acriflavin resistance protein family signature 369 390 7.4E-91 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 syc1735_c 225eb34a9c24febb599bdb0549bd1691 1056 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 7.4E-91 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 syc1735_c 225eb34a9c24febb599bdb0549bd1691 1056 PRINTS PR00702 Acriflavin resistance protein family signature 624 638 7.4E-91 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 syc1735_c 225eb34a9c24febb599bdb0549bd1691 1056 PRINTS PR00702 Acriflavin resistance protein family signature 397 421 7.4E-91 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 syc1735_c 225eb34a9c24febb599bdb0549bd1691 1056 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 7.4E-91 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 syc1735_c 225eb34a9c24febb599bdb0549bd1691 1056 PRINTS PR00702 Acriflavin resistance protein family signature 475 498 7.4E-91 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 syc1735_c 225eb34a9c24febb599bdb0549bd1691 1056 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 6 1049 0.0 T 11-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 syc1735_c 225eb34a9c24febb599bdb0549bd1691 1056 Gene3D G3DSA:1.20.1640.10 518 1029 1.7E-303 T 11-10-2018 syc1735_c 225eb34a9c24febb599bdb0549bd1691 1056 Gene3D G3DSA:3.30.2090.10 727 815 1.7E-303 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains syc1735_c 225eb34a9c24febb599bdb0549bd1691 1056 SUPERFAMILY SSF82693 679 853 6.02E-13 T 11-10-2018 syc1735_c 225eb34a9c24febb599bdb0549bd1691 1056 Gene3D G3DSA:3.30.2090.10 182 281 1.7E-303 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains syc1735_c 225eb34a9c24febb599bdb0549bd1691 1056 SUPERFAMILY SSF82714 186 278 4.97E-21 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains syc1735_c 225eb34a9c24febb599bdb0549bd1691 1056 Gene3D G3DSA:1.20.1640.10 12 517 1.7E-303 T 11-10-2018 syc1735_c 225eb34a9c24febb599bdb0549bd1691 1056 SUPERFAMILY SSF82866 303 503 2.22E-48 T 11-10-2018 syc1735_c 225eb34a9c24febb599bdb0549bd1691 1056 Pfam PF00873 AcrB/AcrD/AcrF family 5 1032 0.0 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 syc1735_c 225eb34a9c24febb599bdb0549bd1691 1056 Gene3D G3DSA:3.30.70.1430 572 672 1.7E-303 T 11-10-2018 syc1735_c 225eb34a9c24febb599bdb0549bd1691 1056 SUPERFAMILY SSF82714 728 813 1.57E-21 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains syc1735_c 225eb34a9c24febb599bdb0549bd1691 1056 Gene3D G3DSA:3.30.70.1430 42 823 1.7E-303 T 11-10-2018 syc1735_c 225eb34a9c24febb599bdb0549bd1691 1056 SUPERFAMILY SSF82693 570 675 5.23E-28 T 11-10-2018 syc1735_c 225eb34a9c24febb599bdb0549bd1691 1056 Gene3D G3DSA:3.30.70.1320 136 338 1.7E-303 T 11-10-2018 syc1177_c bab862913df08975e7b00d814845adc6 505 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 4 501 4.2E-254 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 syc1177_c bab862913df08975e7b00d814845adc6 505 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 356 365 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 syc1177_c bab862913df08975e7b00d814845adc6 505 SUPERFAMILY SSF52540 97 371 9.04E-99 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc1177_c bab862913df08975e7b00d814845adc6 505 SUPERFAMILY SSF47917 373 500 1.26E-45 T 11-10-2018 syc1177_c bab862913df08975e7b00d814845adc6 505 Gene3D G3DSA:2.40.30.20 2 94 2.3E-37 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 syc1177_c bab862913df08975e7b00d814845adc6 505 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 372 496 4.8E-45 T 11-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 syc1177_c bab862913df08975e7b00d814845adc6 505 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 2 502 51.253 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 syc1177_c bab862913df08975e7b00d814845adc6 505 Gene3D G3DSA:1.20.150.20 373 504 1.8E-49 T 11-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 syc1177_c bab862913df08975e7b00d814845adc6 505 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 150 365 1.3E-74 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 syc1177_c bab862913df08975e7b00d814845adc6 505 Gene3D G3DSA:3.40.50.300 95 372 6.2E-127 T 11-10-2018 syc1177_c bab862913df08975e7b00d814845adc6 505 PIRSF PIRSF039088 2 504 1.9E-247 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 syc1177_c bab862913df08975e7b00d814845adc6 505 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 26 93 3.5E-18 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 syc1177_c bab862913df08975e7b00d814845adc6 505 SUPERFAMILY SSF50615 11 95 2.55E-30 T 11-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 syc0908_c 3e60bb5f3b956ae805efc7711ac52c01 353 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 7 350 2.4E-77 T 11-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 syc0908_c 3e60bb5f3b956ae805efc7711ac52c01 353 PIRSF PIRSF005485 3 353 6.0E-118 T 11-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 syc0908_c 3e60bb5f3b956ae805efc7711ac52c01 353 Gene3D G3DSA:3.30.390.60 133 241 8.1E-40 T 11-10-2018 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily syc0908_c 3e60bb5f3b956ae805efc7711ac52c01 353 SUPERFAMILY SSF55781 75 352 8.63E-53 T 11-10-2018 syc0908_c 3e60bb5f3b956ae805efc7711ac52c01 353 Pfam PF01628 HrcA protein C terminal domain 109 336 6.8E-52 T 11-10-2018 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 syc0908_c 3e60bb5f3b956ae805efc7711ac52c01 353 Gene3D G3DSA:3.30.450.40 109 350 8.1E-40 T 11-10-2018 IPR029016 GAF-like domain superfamily syc0908_c 3e60bb5f3b956ae805efc7711ac52c01 353 Gene3D G3DSA:1.10.10.10 1 88 3.7E-33 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily syc0908_c 3e60bb5f3b956ae805efc7711ac52c01 353 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 5 344 26.213 T 11-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 syc0908_c 3e60bb5f3b956ae805efc7711ac52c01 353 SUPERFAMILY SSF46785 6 85 1.29E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily syc0237_d c730897f781c6f2c2fc69be70fc7fd55 345 Gene3D G3DSA:3.40.50.1980 37 212 5.7E-37 T 11-10-2018 syc0237_d c730897f781c6f2c2fc69be70fc7fd55 345 Gene3D G3DSA:3.40.50.1980 213 337 5.4E-37 T 11-10-2018 syc0237_d c730897f781c6f2c2fc69be70fc7fd55 345 PRINTS PR00690 Adhesin family signature 79 96 3.1E-9 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 syc0237_d c730897f781c6f2c2fc69be70fc7fd55 345 PRINTS PR00690 Adhesin family signature 66 79 3.1E-9 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 syc0237_d c730897f781c6f2c2fc69be70fc7fd55 345 PRINTS PR00690 Adhesin family signature 35 53 3.1E-9 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 syc0237_d c730897f781c6f2c2fc69be70fc7fd55 345 PRINTS PR00691 Adhesin B signature 35 56 5.0E-8 T 11-10-2018 IPR006129 Adhesin B GO:0007155 syc0237_d c730897f781c6f2c2fc69be70fc7fd55 345 PRINTS PR00691 Adhesin B signature 60 78 5.0E-8 T 11-10-2018 IPR006129 Adhesin B GO:0007155 syc0237_d c730897f781c6f2c2fc69be70fc7fd55 345 PRINTS PR00691 Adhesin B signature 79 98 5.0E-8 T 11-10-2018 IPR006129 Adhesin B GO:0007155 syc0237_d c730897f781c6f2c2fc69be70fc7fd55 345 SUPERFAMILY SSF53807 33 338 3.43E-75 T 11-10-2018 syc0237_d c730897f781c6f2c2fc69be70fc7fd55 345 Pfam PF01297 Zinc-uptake complex component A periplasmic 38 332 4.6E-70 T 11-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 syc2522_d 7c6479889e843edac9726c8b73a78725 226 SUPERFAMILY SSF52317 2 184 3.21E-45 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like syc2522_d 7c6479889e843edac9726c8b73a78725 226 Gene3D G3DSA:3.40.50.880 1 225 2.4E-56 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like syc2522_d 7c6479889e843edac9726c8b73a78725 226 Pfam PF00117 Glutamine amidotransferase class-I 44 177 3.3E-10 T 11-10-2018 IPR017926 Glutamine amidotransferase syc2473_d 04ea8286f4321c2c470bb9691f13f8ee 202 Pfam PF01479 S4 domain 90 137 7.7E-20 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc2473_d 04ea8286f4321c2c470bb9691f13f8ee 202 Gene3D G3DSA:3.10.290.10 89 185 3.4E-69 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 syc2473_d 04ea8286f4321c2c470bb9691f13f8ee 202 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 200 1.5E-79 T 11-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 syc2473_d 04ea8286f4321c2c470bb9691f13f8ee 202 SMART SM00363 90 154 4.2E-18 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc2473_d 04ea8286f4321c2c470bb9691f13f8ee 202 SUPERFAMILY SSF55174 3 200 2.47E-71 T 11-10-2018 syc2473_d 04ea8286f4321c2c470bb9691f13f8ee 202 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 89 2.8E-28 T 11-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 syc2473_d 04ea8286f4321c2c470bb9691f13f8ee 202 Gene3D G3DSA:1.10.1050.10 6 200 3.4E-69 T 11-10-2018 syc2473_d 04ea8286f4321c2c470bb9691f13f8ee 202 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 200 34.27 T 11-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 syc2473_d 04ea8286f4321c2c470bb9691f13f8ee 202 ProSitePatterns PS00632 Ribosomal protein S4 signature. 88 112 - T 11-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc2473_d 04ea8286f4321c2c470bb9691f13f8ee 202 SMART SM01390 3 89 5.5E-40 T 11-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 syc0698_d da1287ee5ecbbf3f4b95ac579495270d 446 Gene3D G3DSA:3.50.50.60 5 318 1.7E-111 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc0698_d da1287ee5ecbbf3f4b95ac579495270d 446 TIGRFAM TIGR01424 gluta_reduc_2: glutathione-disulfide reductase 3 445 1.5E-188 T 11-10-2018 IPR006324 Glutathione-disulphide reductase GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081 syc0698_d da1287ee5ecbbf3f4b95ac579495270d 446 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 131 149 3.1E-30 T 11-10-2018 syc0698_d da1287ee5ecbbf3f4b95ac579495270d 446 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 3.1E-30 T 11-10-2018 syc0698_d da1287ee5ecbbf3f4b95ac579495270d 446 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 280 302 3.1E-30 T 11-10-2018 syc0698_d da1287ee5ecbbf3f4b95ac579495270d 446 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 168 186 3.1E-30 T 11-10-2018 syc0698_d da1287ee5ecbbf3f4b95ac579495270d 446 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 252 268 3.1E-30 T 11-10-2018 syc0698_d da1287ee5ecbbf3f4b95ac579495270d 446 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 315 9.7E-68 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 syc0698_d da1287ee5ecbbf3f4b95ac579495270d 446 Gene3D G3DSA:3.50.50.60 143 259 1.7E-111 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc0698_d da1287ee5ecbbf3f4b95ac579495270d 446 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 331 352 1.3E-66 T 11-10-2018 syc0698_d da1287ee5ecbbf3f4b95ac579495270d 446 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 420 440 1.3E-66 T 11-10-2018 syc0698_d da1287ee5ecbbf3f4b95ac579495270d 446 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 168 193 1.3E-66 T 11-10-2018 syc0698_d da1287ee5ecbbf3f4b95ac579495270d 446 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 253 267 1.3E-66 T 11-10-2018 syc0698_d da1287ee5ecbbf3f4b95ac579495270d 446 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 398 413 1.3E-66 T 11-10-2018 syc0698_d da1287ee5ecbbf3f4b95ac579495270d 446 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.3E-66 T 11-10-2018 syc0698_d da1287ee5ecbbf3f4b95ac579495270d 446 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 1.3E-66 T 11-10-2018 syc0698_d da1287ee5ecbbf3f4b95ac579495270d 446 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 295 302 1.3E-66 T 11-10-2018 syc0698_d da1287ee5ecbbf3f4b95ac579495270d 446 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 134 143 1.3E-66 T 11-10-2018 syc0698_d da1287ee5ecbbf3f4b95ac579495270d 446 PIRSF PIRSF000350 1 443 1.9E-85 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 syc0698_d da1287ee5ecbbf3f4b95ac579495270d 446 SUPERFAMILY SSF51905 1 361 8.51E-58 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc0698_d da1287ee5ecbbf3f4b95ac579495270d 446 Gene3D G3DSA:3.30.390.30 334 446 4.0E-42 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 syc0698_d da1287ee5ecbbf3f4b95ac579495270d 446 SUPERFAMILY SSF55424 332 445 5.15E-34 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 syc0698_d da1287ee5ecbbf3f4b95ac579495270d 446 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 11-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 syc0698_d da1287ee5ecbbf3f4b95ac579495270d 446 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 335 445 3.8E-33 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 syc0117_d ea6c765bfc68123dfb4d74c457263ad0 533 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 240 264 2.3E-36 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc0117_d ea6c765bfc68123dfb4d74c457263ad0 533 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 328 347 2.3E-36 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc0117_d ea6c765bfc68123dfb4d74c457263ad0 533 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 169 193 2.3E-36 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc0117_d ea6c765bfc68123dfb4d74c457263ad0 533 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 380 406 2.3E-36 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc0117_d ea6c765bfc68123dfb4d74c457263ad0 533 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 139 158 2.3E-36 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc0117_d ea6c765bfc68123dfb4d74c457263ad0 533 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 9 495 3.6E-174 T 11-10-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc0117_d ea6c765bfc68123dfb4d74c457263ad0 533 Pfam PF00361 Proton-conducting membrane transporter 133 407 1.6E-66 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc0117_d ea6c765bfc68123dfb4d74c457263ad0 533 Hamap MF_00491 NAD(P)H-quinone oxidoreductase chain 4 [ndhD]. 3 499 39.375 T 11-10-2018 IPR022997 NADH-quinone oxidoreductase chain 4 GO:0016655|GO:0055114 syc1689_d 4639454816902464cf8e1e050e0449a1 421 Pfam PF01547 Bacterial extracellular solute-binding protein 45 327 1.0E-36 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein syc1689_d 4639454816902464cf8e1e050e0449a1 421 Gene3D G3DSA:3.40.190.10 20 420 1.1E-71 T 11-10-2018 syc1689_d 4639454816902464cf8e1e050e0449a1 421 SUPERFAMILY SSF53850 26 419 1.04E-71 T 11-10-2018 syc2000_c 9db5f53714448b3995639d36df20dd9a 430 TIGRFAM TIGR01964 chpXY: CO2 hydration protein 14 425 1.7E-225 T 11-10-2018 IPR010220 CO2 hydration syc2000_c 9db5f53714448b3995639d36df20dd9a 430 Pfam PF10216 CO2 hydration protein (ChpXY) 20 414 1.3E-167 T 11-10-2018 IPR010220 CO2 hydration syc1546_d 274f8e231b5b1f877d6a1fc1bb3b2616 158 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 85 98 6.5E-19 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 syc1546_d 274f8e231b5b1f877d6a1fc1bb3b2616 158 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 102 116 6.5E-19 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 syc1546_d 274f8e231b5b1f877d6a1fc1bb3b2616 158 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 117 130 6.5E-19 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 syc1546_d 274f8e231b5b1f877d6a1fc1bb3b2616 158 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 112 129 - T 11-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 syc1546_d 274f8e231b5b1f877d6a1fc1bb3b2616 158 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 3 155 3.9E-49 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 syc1546_d 274f8e231b5b1f877d6a1fc1bb3b2616 158 SUPERFAMILY SSF51230 80 155 2.88E-23 T 11-10-2018 IPR011053 Single hybrid motif syc1546_d 274f8e231b5b1f877d6a1fc1bb3b2616 158 Gene3D G3DSA:2.40.50.100 80 155 1.3E-29 T 11-10-2018 syc1546_d 274f8e231b5b1f877d6a1fc1bb3b2616 158 Pfam PF00364 Biotin-requiring enzyme 82 155 3.6E-23 T 11-10-2018 IPR000089 Biotin/lipoyl attachment syc1914_d 0191a65ac2709ea609abf6242a3bd7b4 381 Gene3D G3DSA:3.10.580.10 206 346 2.7E-6 T 11-10-2018 syc1914_d 0191a65ac2709ea609abf6242a3bd7b4 381 PIRSF PIRSF006404 1 350 1.7E-93 T 11-10-2018 IPR016483 Uncharacterised conserved protein UCP006404, peptidase M50/CBS syc1914_d 0191a65ac2709ea609abf6242a3bd7b4 381 SUPERFAMILY SSF54631 223 343 4.55E-9 T 11-10-2018 syc1914_d 0191a65ac2709ea609abf6242a3bd7b4 381 Pfam PF13398 Peptidase M50B-like 35 105 2.3E-5 T 11-10-2018 syc0875_d 70060cc57f27d37e5e6059579cb85fc1 243 SUPERFAMILY SSF50891 45 231 3.07E-37 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily syc0875_d 70060cc57f27d37e5e6059579cb85fc1 243 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 191 203 9.4E-5 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 syc0875_d 70060cc57f27d37e5e6059579cb85fc1 243 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 204 219 9.4E-5 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 syc0875_d 70060cc57f27d37e5e6059579cb85fc1 243 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 70 85 9.4E-5 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 syc0875_d 70060cc57f27d37e5e6059579cb85fc1 243 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 57 229 4.2E-41 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 syc0875_d 70060cc57f27d37e5e6059579cb85fc1 243 Gene3D G3DSA:2.40.100.10 23 243 6.1E-64 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily syc1243_c 5a634c0d2866126a4eba5c738411f97c 403 SUPERFAMILY SSF48452 247 381 4.72E-23 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc1243_c 5a634c0d2866126a4eba5c738411f97c 403 Pfam PF00535 Glycosyl transferase family 2 11 137 5.1E-23 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 syc1243_c 5a634c0d2866126a4eba5c738411f97c 403 Pfam PF13432 Tetratricopeptide repeat 213 275 1.1E-4 T 11-10-2018 syc1243_c 5a634c0d2866126a4eba5c738411f97c 403 Pfam PF13414 TPR repeat 324 365 4.3E-13 T 11-10-2018 syc1243_c 5a634c0d2866126a4eba5c738411f97c 403 Gene3D G3DSA:3.90.550.10 5 194 2.9E-26 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases syc1243_c 5a634c0d2866126a4eba5c738411f97c 403 SMART SM00028 246 279 8.1 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc1243_c 5a634c0d2866126a4eba5c738411f97c 403 SMART SM00028 283 316 30.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc1243_c 5a634c0d2866126a4eba5c738411f97c 403 SMART SM00028 351 384 12.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc1243_c 5a634c0d2866126a4eba5c738411f97c 403 SMART SM00028 317 350 3.3E-7 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc1243_c 5a634c0d2866126a4eba5c738411f97c 403 Gene3D G3DSA:1.25.40.10 283 399 4.2E-22 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc1243_c 5a634c0d2866126a4eba5c738411f97c 403 Gene3D G3DSA:1.25.40.10 195 282 1.8E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc1243_c 5a634c0d2866126a4eba5c738411f97c 403 SUPERFAMILY SSF53448 7 182 2.88E-28 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases syc1243_c 5a634c0d2866126a4eba5c738411f97c 403 Pfam PF13181 Tetratricopeptide repeat 285 315 0.044 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc1243_c 5a634c0d2866126a4eba5c738411f97c 403 SUPERFAMILY SSF48452 185 274 7.59E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc0276_d 87ba849200cb657b9c8b95b9e460616b 260 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 47 259 7.8E-37 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF syc0276_d 87ba849200cb657b9c8b95b9e460616b 260 Gene3D G3DSA:3.40.190.10 41 253 1.9E-44 T 11-10-2018 syc0276_d 87ba849200cb657b9c8b95b9e460616b 260 Gene3D G3DSA:3.40.190.10 136 218 1.9E-44 T 11-10-2018 syc0276_d 87ba849200cb657b9c8b95b9e460616b 260 SMART SM00062 46 260 2.5E-37 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF syc0276_d 87ba849200cb657b9c8b95b9e460616b 260 SUPERFAMILY SSF53850 38 258 1.54E-43 T 11-10-2018 syc0276_d 87ba849200cb657b9c8b95b9e460616b 260 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 69 82 - T 11-10-2018 IPR018313 Solute-binding protein family 3, conserved site syc1375_c 3c95fb075087a1c3b765a120c0537748 143 Pfam PF03652 Holliday junction resolvase 8 133 7.5E-7 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 syc1375_c 3c95fb075087a1c3b765a120c0537748 143 Gene3D G3DSA:3.30.420.140 7 142 3.5E-6 T 11-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 syc1375_c 3c95fb075087a1c3b765a120c0537748 143 SMART SM00732 6 93 2.2E-15 T 11-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 syc1375_c 3c95fb075087a1c3b765a120c0537748 143 SUPERFAMILY SSF53098 8 133 3.03E-19 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily syc2190_d 557a29d0a85d08cd43df6a0ace5b9b6c 1000 ProSitePatterns PS00211 ABC transporters family signature. 898 912 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 syc2190_d 557a29d0a85d08cd43df6a0ace5b9b6c 1000 SMART SM00100 17 135 6.4E-5 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain syc2190_d 557a29d0a85d08cd43df6a0ace5b9b6c 1000 SUPERFAMILY SSF90123 431 746 6.41E-74 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 syc2190_d 557a29d0a85d08cd43df6a0ace5b9b6c 1000 TIGRFAM TIGR01846 type_I_sec_HlyB: type I secretion system ATPase 302 996 1.9E-226 T 11-10-2018 IPR010132 ATPase, type I secretion system, HlyB GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 syc2190_d 557a29d0a85d08cd43df6a0ace5b9b6c 1000 Gene3D G3DSA:3.90.70.10 282 426 4.4E-13 T 11-10-2018 syc2190_d 557a29d0a85d08cd43df6a0ace5b9b6c 1000 Pfam PF00005 ABC transporter 777 926 3.3E-36 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 syc2190_d 557a29d0a85d08cd43df6a0ace5b9b6c 1000 Pfam PF00664 ABC transporter transmembrane region 444 713 4.2E-53 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 syc2190_d 557a29d0a85d08cd43df6a0ace5b9b6c 1000 Gene3D G3DSA:3.40.50.300 752 999 4.2E-92 T 11-10-2018 syc2190_d 557a29d0a85d08cd43df6a0ace5b9b6c 1000 Pfam PF03412 Peptidase C39 family 292 419 3.5E-10 T 11-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 syc2190_d 557a29d0a85d08cd43df6a0ace5b9b6c 1000 SUPERFAMILY SSF52540 749 996 3.52E-90 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc2190_d 557a29d0a85d08cd43df6a0ace5b9b6c 1000 Gene3D G3DSA:1.20.1560.10 429 744 2.6E-81 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 syc2190_d 557a29d0a85d08cd43df6a0ace5b9b6c 1000 Gene3D G3DSA:2.60.120.10 8 134 2.9E-7 T 11-10-2018 IPR014710 RmlC-like jelly roll fold syc2190_d 557a29d0a85d08cd43df6a0ace5b9b6c 1000 SMART SM00382 786 972 3.1E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain syc2190_d 557a29d0a85d08cd43df6a0ace5b9b6c 1000 SUPERFAMILY SSF51206 8 132 3.14E-10 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like syc2494_d 48a41dc7cf9d134198b0ca4f0a7cadbe 357 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 2 348 38.613 T 11-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 syc2494_d 48a41dc7cf9d134198b0ca4f0a7cadbe 357 SUPERFAMILY SSF52402 2 239 1.85E-49 T 11-10-2018 syc2494_d 48a41dc7cf9d134198b0ca4f0a7cadbe 357 Pfam PF03054 tRNA methyl transferase 3 347 1.3E-119 T 11-10-2018 syc2494_d 48a41dc7cf9d134198b0ca4f0a7cadbe 357 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 3 347 1.5E-121 T 11-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 syc2494_d 48a41dc7cf9d134198b0ca4f0a7cadbe 357 Gene3D G3DSA:3.40.50.620 1 207 3.4E-71 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold syc2494_d 48a41dc7cf9d134198b0ca4f0a7cadbe 357 Gene3D G3DSA:2.40.30.10 271 353 2.5E-25 T 11-10-2018 syc2494_d 48a41dc7cf9d134198b0ca4f0a7cadbe 357 Gene3D G3DSA:2.30.30.280 208 270 8.5E-21 T 11-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 syc1583_c 3320ca10448c4d8d3a04ff9baed13512 449 SUPERFAMILY SSF52540 84 430 2.01E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc1583_c 3320ca10448c4d8d3a04ff9baed13512 449 SMART SM00994 7 46 5.4E-24 T 11-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 syc1583_c 3320ca10448c4d8d3a04ff9baed13512 449 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 1 435 4.2E-206 T 11-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 syc1583_c 3320ca10448c4d8d3a04ff9baed13512 449 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 342 419 3.9E-16 T 11-10-2018 IPR019489 Clp ATPase, C-terminal syc1583_c 3320ca10448c4d8d3a04ff9baed13512 449 SUPERFAMILY SSF57716 8 43 1.71E-11 T 11-10-2018 syc1583_c 3320ca10448c4d8d3a04ff9baed13512 449 Gene3D G3DSA:3.30.50.30 2 47 2.8E-23 T 11-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily syc1583_c 3320ca10448c4d8d3a04ff9baed13512 449 Gene3D G3DSA:1.10.8.60 341 441 1.1E-34 T 11-10-2018 syc1583_c 3320ca10448c4d8d3a04ff9baed13512 449 SMART SM00382 137 294 5.6E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain syc1583_c 3320ca10448c4d8d3a04ff9baed13512 449 SMART SM01086 342 437 3.4E-29 T 11-10-2018 IPR019489 Clp ATPase, C-terminal syc1583_c 3320ca10448c4d8d3a04ff9baed13512 449 Pfam PF06689 ClpX C4-type zinc finger 9 45 4.7E-21 T 11-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 syc1583_c 3320ca10448c4d8d3a04ff9baed13512 449 Pfam PF07724 AAA domain (Cdc48 subfamily) 137 335 1.5E-47 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 syc1583_c 3320ca10448c4d8d3a04ff9baed13512 449 Gene3D G3DSA:3.40.50.300 79 340 5.4E-109 T 11-10-2018 syc1583_c 3320ca10448c4d8d3a04ff9baed13512 449 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 440 51.716 T 11-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 syc1115_d 6abef6761b582d4c0adbea490b0d9e3f 200 Gene3D G3DSA:3.40.50.880 1 195 6.0E-59 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like syc1115_d 6abef6761b582d4c0adbea490b0d9e3f 200 PRINTS PR00096 Glutamine amidotransferase superfamily signature 80 91 2.0E-14 T 11-10-2018 syc1115_d 6abef6761b582d4c0adbea490b0d9e3f 200 PRINTS PR00096 Glutamine amidotransferase superfamily signature 53 62 2.0E-14 T 11-10-2018 syc1115_d 6abef6761b582d4c0adbea490b0d9e3f 200 PRINTS PR00096 Glutamine amidotransferase superfamily signature 171 184 2.0E-14 T 11-10-2018 syc1115_d 6abef6761b582d4c0adbea490b0d9e3f 200 PRINTS PR00097 Anthranilate synthase component II signature 53 62 8.8E-37 T 11-10-2018 syc1115_d 6abef6761b582d4c0adbea490b0d9e3f 200 PRINTS PR00097 Anthranilate synthase component II signature 171 184 8.8E-37 T 11-10-2018 syc1115_d 6abef6761b582d4c0adbea490b0d9e3f 200 PRINTS PR00097 Anthranilate synthase component II signature 80 91 8.8E-37 T 11-10-2018 syc1115_d 6abef6761b582d4c0adbea490b0d9e3f 200 PRINTS PR00097 Anthranilate synthase component II signature 125 137 8.8E-37 T 11-10-2018 syc1115_d 6abef6761b582d4c0adbea490b0d9e3f 200 PRINTS PR00097 Anthranilate synthase component II signature 105 113 8.8E-37 T 11-10-2018 syc1115_d 6abef6761b582d4c0adbea490b0d9e3f 200 PRINTS PR00097 Anthranilate synthase component II signature 2 16 8.8E-37 T 11-10-2018 syc1115_d 6abef6761b582d4c0adbea490b0d9e3f 200 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 2 193 7.9E-70 T 11-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 syc1115_d 6abef6761b582d4c0adbea490b0d9e3f 200 SUPERFAMILY SSF52317 2 194 2.59E-51 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like syc1115_d 6abef6761b582d4c0adbea490b0d9e3f 200 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 50 64 9.1E-8 T 11-10-2018 syc1115_d 6abef6761b582d4c0adbea490b0d9e3f 200 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 80 96 9.1E-8 T 11-10-2018 syc1115_d 6abef6761b582d4c0adbea490b0d9e3f 200 Pfam PF00117 Glutamine amidotransferase class-I 3 194 2.1E-50 T 11-10-2018 IPR017926 Glutamine amidotransferase syc2390_d fd727a3687082697f05312e7529d006c 314 Gene3D G3DSA:3.90.25.10 169 304 8.1E-109 T 11-10-2018 syc2390_d fd727a3687082697f05312e7529d006c 314 SUPERFAMILY SSF51735 5 309 1.39E-79 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily syc2390_d fd727a3687082697f05312e7529d006c 314 Hamap MF_00956 GDP-L-fucose synthase [fcl]. 4 306 50.233 T 11-10-2018 IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase GO:0009226|GO:0016491 KEGG: 00051+1.1.1.271|KEGG: 00520+1.1.1.271|MetaCyc: PWY-66|Reactome: R-HSA-6787639 syc2390_d fd727a3687082697f05312e7529d006c 314 Gene3D G3DSA:3.40.50.720 7 295 8.1E-109 T 11-10-2018 syc2390_d fd727a3687082697f05312e7529d006c 314 Pfam PF01370 NAD dependent epimerase/dehydratase family 7 238 2.1E-77 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 syc2364_d e8b2a399fa03752f25e88bc6f11d7d30 193 PIRSF PIRSF016661 2 193 4.1E-31 T 11-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 syc2364_d e8b2a399fa03752f25e88bc6f11d7d30 193 Pfam PF02632 BioY family 46 188 3.9E-22 T 11-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 syc2364_d e8b2a399fa03752f25e88bc6f11d7d30 193 Gene3D G3DSA:1.10.1760.20 1 192 1.5E-23 T 11-10-2018 syc2242_c 0011e0faaa19ebc4438778ce6941ef07 209 Gene3D G3DSA:3.40.50.10230 1 208 1.0E-81 T 11-10-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 syc2242_c 0011e0faaa19ebc4438778ce6941ef07 209 SUPERFAMILY SSF63965 1 205 3.66E-73 T 11-10-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 syc2242_c 0011e0faaa19ebc4438778ce6941ef07 209 Pfam PF02570 Precorrin-8X methylmutase 10 205 7.5E-72 T 11-10-2018 IPR003722 Cobalamin biosynthesis precorrin-8X methylmutase CobH/CbiC GO:0009236|GO:0016993 syc2303_c 3c47374167917425281ddaa3235aa6d3 212 SUPERFAMILY SSF53335 2 200 3.78E-41 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase syc2303_c 3c47374167917425281ddaa3235aa6d3 212 Gene3D G3DSA:1.10.1020.10 13 104 2.7E-44 T 11-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 syc2303_c 3c47374167917425281ddaa3235aa6d3 212 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 2 177 1.1E-30 T 11-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 syc2303_c 3c47374167917425281ddaa3235aa6d3 212 Gene3D G3DSA:3.40.50.150 1 177 2.7E-44 T 11-10-2018 syc2303_c 3c47374167917425281ddaa3235aa6d3 212 TIGRFAM TIGR00571 dam: DNA adenine methylase 2 197 7.1E-45 T 11-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 syc2303_c 3c47374167917425281ddaa3235aa6d3 212 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 124 130 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 syc1490_d 56b361884a05ee529a11e67bc1434e29 116 Pfam PF12732 YtxH-like protein 10 83 5.5E-12 T 11-10-2018 IPR024623 Uncharacterised protein family YtxH syc0410_d 0eee3584b0388314a992bf5eb938f3d9 585 SUPERFAMILY SSF51905 4 445 4.79E-22 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc0410_d 0eee3584b0388314a992bf5eb938f3d9 585 Gene3D G3DSA:3.50.50.60 3 84 2.7E-9 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc0410_d 0eee3584b0388314a992bf5eb938f3d9 585 Pfam PF12831 FAD dependent oxidoreductase 8 463 7.3E-114 T 11-10-2018 IPR039649 Digeranylgeranylglycerophospholipid reductase, N-terminal syc0895_c 06d699bd35924e04d68d80ecec8998c2 380 Pfam PF12565 Protein of unknown function (DUF3747) 9 178 5.0E-58 T 11-10-2018 IPR022222 Protein of unknown function DUF3747 syc1043_c 90fa3d98b002a4b01a1e88fb2fd43f78 136 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 58 127 4.0E-17 T 11-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 syc1043_c 90fa3d98b002a4b01a1e88fb2fd43f78 136 SUPERFAMILY SSF54736 56 130 1.78E-21 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like syc1043_c 90fa3d98b002a4b01a1e88fb2fd43f78 136 Gene3D G3DSA:3.30.1390.10 36 135 4.5E-12 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like syc1464_d 84f2ac499af5985b221f5bf3cf7f2426 110 Gene3D G3DSA:3.30.460.10 2 99 1.1E-18 T 11-10-2018 syc1464_d 84f2ac499af5985b221f5bf3cf7f2426 110 Pfam PF01909 Nucleotidyltransferase domain 14 88 2.7E-13 T 11-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 syc1464_d 84f2ac499af5985b221f5bf3cf7f2426 110 SUPERFAMILY SSF81301 11 105 4.58E-18 T 11-10-2018 syc0359_c 896d9d17143b8367dd24d9ad44c44c08 183 Hamap MF_00328 Guanylate kinase [gmk]. 2 183 33.944 T 11-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 syc0359_c 896d9d17143b8367dd24d9ad44c44c08 183 Gene3D G3DSA:3.30.63.10 35 94 2.9E-65 T 11-10-2018 syc0359_c 896d9d17143b8367dd24d9ad44c44c08 183 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 4 181 4.4E-70 T 11-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 syc0359_c 896d9d17143b8367dd24d9ad44c44c08 183 SMART SM00072 3 181 7.7E-65 T 11-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit syc0359_c 896d9d17143b8367dd24d9ad44c44c08 183 Pfam PF00625 Guanylate kinase 5 182 1.1E-51 T 11-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit syc0359_c 896d9d17143b8367dd24d9ad44c44c08 183 Gene3D G3DSA:3.40.50.300 8 181 2.9E-65 T 11-10-2018 syc0359_c 896d9d17143b8367dd24d9ad44c44c08 183 ProSitePatterns PS00856 Guanylate kinase-like signature. 38 55 - T 11-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 syc0359_c 896d9d17143b8367dd24d9ad44c44c08 183 SUPERFAMILY SSF52540 4 182 3.48E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc1244_d ebcb90891457e951e692a394234c66c6 319 PRINTS PR00111 Alpha/beta hydrolase fold signature 134 147 4.7E-7 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 syc1244_d ebcb90891457e951e692a394234c66c6 319 PRINTS PR00111 Alpha/beta hydrolase fold signature 120 133 4.7E-7 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 syc1244_d ebcb90891457e951e692a394234c66c6 319 PRINTS PR00111 Alpha/beta hydrolase fold signature 72 87 4.7E-7 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 syc1244_d ebcb90891457e951e692a394234c66c6 319 Gene3D G3DSA:3.40.50.1820 7 311 2.4E-60 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold syc1244_d ebcb90891457e951e692a394234c66c6 319 SUPERFAMILY SSF53474 24 309 8.78E-63 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold syc1244_d ebcb90891457e951e692a394234c66c6 319 Pfam PF12697 Alpha/beta hydrolase family 49 301 6.0E-24 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 syc1664_d 2f431a1347856c405b41fe177584f9d5 303 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 29 300 3.1E-84 T 11-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 syc1664_d 2f431a1347856c405b41fe177584f9d5 303 SUPERFAMILY SSF161098 39 289 8.9E-35 T 11-10-2018 IPR035906 MetI-like superfamily syc1664_d 2f431a1347856c405b41fe177584f9d5 303 Gene3D G3DSA:1.10.3720.10 69 301 1.0E-29 T 11-10-2018 IPR035906 MetI-like superfamily syc1664_d 2f431a1347856c405b41fe177584f9d5 303 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 291 6.8E-16 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 syc1948_c 018de032ad1b880f4fff8776c0033030 420 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 29 417 1.8E-188 T 11-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 syc1948_c 018de032ad1b880f4fff8776c0033030 420 Gene3D G3DSA:3.40.50.1100 76 411 5.7E-185 T 11-10-2018 syc1948_c 018de032ad1b880f4fff8776c0033030 420 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 76 403 1.5E-47 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme syc1948_c 018de032ad1b880f4fff8776c0033030 420 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 108 122 - T 11-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 syc1948_c 018de032ad1b880f4fff8776c0033030 420 PIRSF PIRSF001413 7 420 1.5E-164 T 11-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 syc1948_c 018de032ad1b880f4fff8776c0033030 420 Gene3D G3DSA:3.40.50.1100 32 233 5.7E-185 T 11-10-2018 syc1948_c 018de032ad1b880f4fff8776c0033030 420 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 24 418 52.727 T 11-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 syc1948_c 018de032ad1b880f4fff8776c0033030 420 SUPERFAMILY SSF53686 25 416 3.14E-146 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme syc1547_c e6687c9cea43d896467621bb3ce5fe04 1000 Pfam PF04423 Rad50 zinc hook motif 480 520 5.3E-5 T 11-10-2018 IPR013134 RAD50, zinc hook Reactome: R-HSA-2559586|Reactome: R-HSA-5685938|Reactome: R-HSA-5685939|Reactome: R-HSA-5685942|Reactome: R-HSA-5693548|Reactome: R-HSA-5693554|Reactome: R-HSA-5693565|Reactome: R-HSA-5693568|Reactome: R-HSA-5693571|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 syc1547_c e6687c9cea43d896467621bb3ce5fe04 1000 SUPERFAMILY SSF52540 1 961 4.7E-17 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc1547_c e6687c9cea43d896467621bb3ce5fe04 1000 SUPERFAMILY SSF75712 452 549 1.06E-23 T 11-10-2018 syc1547_c e6687c9cea43d896467621bb3ce5fe04 1000 Gene3D G3DSA:3.40.50.300 756 988 1.4E-15 T 11-10-2018 syc1547_c e6687c9cea43d896467621bb3ce5fe04 1000 Gene3D G3DSA:3.40.50.300 1 303 6.9E-37 T 11-10-2018 syc0741_c 49864d4135e6cc3b132c5ee5d9620fff 181 Pfam PF05258 Protein of unknown function (DUF721) 5 94 1.7E-22 T 11-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 syc0213_d 54ce9e6f1602046084d905ceea0e1d4b 192 Hamap MF_00163 Peptide deformylase [def]. 17 178 30.427 T 11-10-2018 IPR023635 Peptide deformylase syc0213_d 54ce9e6f1602046084d905ceea0e1d4b 192 PRINTS PR01576 Peptide deformylase signature 48 77 1.2E-37 T 11-10-2018 IPR023635 Peptide deformylase syc0213_d 54ce9e6f1602046084d905ceea0e1d4b 192 PRINTS PR01576 Peptide deformylase signature 119 137 1.2E-37 T 11-10-2018 IPR023635 Peptide deformylase syc0213_d 54ce9e6f1602046084d905ceea0e1d4b 192 PRINTS PR01576 Peptide deformylase signature 107 118 1.2E-37 T 11-10-2018 IPR023635 Peptide deformylase syc0213_d 54ce9e6f1602046084d905ceea0e1d4b 192 PRINTS PR01576 Peptide deformylase signature 138 167 1.2E-37 T 11-10-2018 IPR023635 Peptide deformylase syc0213_d 54ce9e6f1602046084d905ceea0e1d4b 192 Gene3D G3DSA:3.90.45.10 1 192 9.6E-80 T 11-10-2018 IPR036821 Peptide deformylase superfamily syc0213_d 54ce9e6f1602046084d905ceea0e1d4b 192 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 21 170 1.1E-55 T 11-10-2018 IPR023635 Peptide deformylase syc0213_d 54ce9e6f1602046084d905ceea0e1d4b 192 SUPERFAMILY SSF56420 10 168 8.24E-60 T 11-10-2018 IPR036821 Peptide deformylase superfamily syc0213_d 54ce9e6f1602046084d905ceea0e1d4b 192 PIRSF PIRSF004749 2 183 6.7E-58 T 11-10-2018 IPR023635 Peptide deformylase syc0213_d 54ce9e6f1602046084d905ceea0e1d4b 192 Pfam PF01327 Polypeptide deformylase 22 167 3.5E-53 T 11-10-2018 IPR023635 Peptide deformylase syc1922_c 0d58f6344a007167be4aeb200111cbef 186 Gene3D G3DSA:3.40.30.10 103 176 4.1E-10 T 11-10-2018 syc1922_c 0d58f6344a007167be4aeb200111cbef 186 SUPERFAMILY SSF52833 102 174 3.02E-9 T 11-10-2018 IPR036249 Thioredoxin-like superfamily syc2027_d b6dfbf14bb61d10d20e7a3abce96ea21 343 PIRSF PIRSF006621 9 327 1.5E-76 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 syc2027_d b6dfbf14bb61d10d20e7a3abce96ea21 343 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 13 334 51.796 T 11-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 syc2027_d b6dfbf14bb61d10d20e7a3abce96ea21 343 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 18 333 6.5E-150 T 11-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 syc2027_d b6dfbf14bb61d10d20e7a3abce96ea21 343 SUPERFAMILY SSF51395 17 312 3.04E-75 T 11-10-2018 syc2027_d b6dfbf14bb61d10d20e7a3abce96ea21 343 Pfam PF01207 Dihydrouridine synthase (Dus) 21 314 9.9E-89 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 syc2027_d b6dfbf14bb61d10d20e7a3abce96ea21 343 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 100 118 - T 11-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 syc2027_d b6dfbf14bb61d10d20e7a3abce96ea21 343 Gene3D G3DSA:3.20.20.70 15 257 2.8E-76 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 syc2027_d b6dfbf14bb61d10d20e7a3abce96ea21 343 Gene3D G3DSA:1.20.120.1460 261 335 7.9E-20 T 11-10-2018 syc0532_d a1b97f0b04f79fa2764433918ac77ee9 928 SMART SM00260 627 776 4.9E-17 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 syc0532_d a1b97f0b04f79fa2764433918ac77ee9 928 Gene3D G3DSA:2.30.30.40 635 772 1.1E-17 T 11-10-2018 syc0532_d a1b97f0b04f79fa2764433918ac77ee9 928 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 496 634 7.0E-18 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase syc0532_d a1b97f0b04f79fa2764433918ac77ee9 928 Gene3D G3DSA:1.20.120.160 2 140 1.3E-15 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 syc0532_d a1b97f0b04f79fa2764433918ac77ee9 928 Gene3D G3DSA:1.10.287.560 292 352 1.4E-6 T 11-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 syc0532_d a1b97f0b04f79fa2764433918ac77ee9 928 SUPERFAMILY SSF50341 635 776 6.15E-18 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 syc0532_d a1b97f0b04f79fa2764433918ac77ee9 928 SMART SM00448 804 918 4.0E-34 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 syc0532_d a1b97f0b04f79fa2764433918ac77ee9 928 SMART SM00073 6 110 1.7E-8 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 syc0532_d a1b97f0b04f79fa2764433918ac77ee9 928 SUPERFAMILY SSF55874 449 633 1.14E-39 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily syc0532_d a1b97f0b04f79fa2764433918ac77ee9 928 Gene3D G3DSA:2.40.50.180 658 731 1.1E-17 T 11-10-2018 syc0532_d a1b97f0b04f79fa2764433918ac77ee9 928 SMART SM01231 292 440 5.4E-10 T 11-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 syc0532_d a1b97f0b04f79fa2764433918ac77ee9 928 SUPERFAMILY SSF47384 293 348 5.89E-6 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 syc0532_d a1b97f0b04f79fa2764433918ac77ee9 928 Gene3D G3DSA:3.30.565.10 446 634 7.5E-54 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily syc0532_d a1b97f0b04f79fa2764433918ac77ee9 928 SUPERFAMILY SSF52172 803 924 6.12E-32 T 11-10-2018 IPR011006 CheY-like superfamily syc0532_d a1b97f0b04f79fa2764433918ac77ee9 928 Pfam PF01584 CheW-like domain 641 777 1.7E-16 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 syc0532_d a1b97f0b04f79fa2764433918ac77ee9 928 Pfam PF00072 Response regulator receiver domain 806 917 4.3E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 syc0532_d a1b97f0b04f79fa2764433918ac77ee9 928 Gene3D G3DSA:3.40.50.12740 804 928 2.6E-35 T 11-10-2018 syc0532_d a1b97f0b04f79fa2764433918ac77ee9 928 Pfam PF01627 Hpt domain 9 94 2.6E-9 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 syc0532_d a1b97f0b04f79fa2764433918ac77ee9 928 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 293 354 5.4E-7 T 11-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 syc0532_d a1b97f0b04f79fa2764433918ac77ee9 928 PRINTS PR00344 Bacterial sensor protein C-terminal signature 595 613 5.3E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 syc0532_d a1b97f0b04f79fa2764433918ac77ee9 928 PRINTS PR00344 Bacterial sensor protein C-terminal signature 619 632 5.3E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 syc0532_d a1b97f0b04f79fa2764433918ac77ee9 928 PRINTS PR00344 Bacterial sensor protein C-terminal signature 579 589 5.3E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 syc0532_d a1b97f0b04f79fa2764433918ac77ee9 928 PRINTS PR00344 Bacterial sensor protein C-terminal signature 537 551 5.3E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 syc0532_d a1b97f0b04f79fa2764433918ac77ee9 928 SUPERFAMILY SSF47226 7 127 1.57E-17 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 syc0532_d a1b97f0b04f79fa2764433918ac77ee9 928 SMART SM00387 492 635 9.1E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase syc0856_c 71b45b96110eec8d7e3a33cb68d3f6b0 360 ProSitePatterns PS01155 Endonuclease III family signature. 105 134 - T 11-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 syc0856_c 71b45b96110eec8d7e3a33cb68d3f6b0 360 Pfam PF14815 NUDIX domain 236 352 5.0E-29 T 11-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 syc0856_c 71b45b96110eec8d7e3a33cb68d3f6b0 360 PRINTS PR00502 NUDIX hydrolase family signature 275 290 7.7E-8 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 syc0856_c 71b45b96110eec8d7e3a33cb68d3f6b0 360 PRINTS PR00502 NUDIX hydrolase family signature 261 275 7.7E-8 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 syc0856_c 71b45b96110eec8d7e3a33cb68d3f6b0 360 ProSitePatterns PS00893 Nudix box signature. 266 287 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 syc0856_c 71b45b96110eec8d7e3a33cb68d3f6b0 360 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 10 269 1.9E-99 T 11-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 syc0856_c 71b45b96110eec8d7e3a33cb68d3f6b0 360 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 38 156 1.6E-18 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 syc0856_c 71b45b96110eec8d7e3a33cb68d3f6b0 360 SUPERFAMILY SSF48150 8 222 2.98E-75 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 syc0856_c 71b45b96110eec8d7e3a33cb68d3f6b0 360 Gene3D G3DSA:1.10.340.30 24 135 1.1E-87 T 11-10-2018 syc0856_c 71b45b96110eec8d7e3a33cb68d3f6b0 360 Gene3D G3DSA:3.90.79.10 233 359 5.9E-41 T 11-10-2018 syc0856_c 71b45b96110eec8d7e3a33cb68d3f6b0 360 SMART SM00478 42 191 1.4E-38 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 syc0856_c 71b45b96110eec8d7e3a33cb68d3f6b0 360 SMART SM00525 192 212 0.0032 T 11-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 syc0856_c 71b45b96110eec8d7e3a33cb68d3f6b0 360 SUPERFAMILY SSF55811 221 355 3.25E-43 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 syc0856_c 71b45b96110eec8d7e3a33cb68d3f6b0 360 Gene3D G3DSA:1.10.1670.10 13 214 1.1E-87 T 11-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 syc0856_c 71b45b96110eec8d7e3a33cb68d3f6b0 360 TIGRFAM TIGR00586 mutt: mutator mutT protein 231 354 1.2E-39 T 11-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 syc0726_c d6c21b19da808d290b16492556fd1c87 420 PIRSF PIRSF001549 1 416 1.2E-70 T 11-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 syc0726_c d6c21b19da808d290b16492556fd1c87 420 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 15 382 31.01 T 11-10-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 syc0726_c d6c21b19da808d290b16492556fd1c87 420 Gene3D G3DSA:3.30.930.10 1 328 1.9E-73 T 11-10-2018 syc0726_c d6c21b19da808d290b16492556fd1c87 420 TIGRFAM TIGR00443 hisZ_biosyn_reg: ATP phosphoribosyltransferase, regulatory subunit 10 328 1.2E-84 T 11-10-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 syc0726_c d6c21b19da808d290b16492556fd1c87 420 Pfam PF13393 Histidyl-tRNA synthetase 8 324 6.9E-71 T 11-10-2018 syc0726_c d6c21b19da808d290b16492556fd1c87 420 SUPERFAMILY SSF55681 3 332 1.55E-57 T 11-10-2018 syc2291_d 672f2d2b5b1cad492c658c3499c28339 540 PIRSF PIRSF026434 1 540 2.3E-224 T 11-10-2018 IPR016837 Uncharacterised protein family Ycf55, cyanobacteria syc2291_d 672f2d2b5b1cad492c658c3499c28339 540 Pfam PF12452 Protein of unknown function (DUF3685) 342 527 1.2E-75 T 11-10-2018 IPR022552 Uncharacterised protein family Ycf55 syc2243_c 85be91efdd544158551f31b9f5632d82 487 Gene3D G3DSA:3.30.413.10 90 262 1.4E-76 T 11-10-2018 syc2243_c 85be91efdd544158551f31b9f5632d82 487 SUPERFAMILY SSF56014 92 256 3.79E-19 T 11-10-2018 syc2243_c 85be91efdd544158551f31b9f5632d82 487 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 92 251 1.0E-12 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 syc2243_c 85be91efdd544158551f31b9f5632d82 487 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 19 69 2.7E-6 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 syc2243_c 85be91efdd544158551f31b9f5632d82 487 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 272 338 1.7E-10 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 syc2243_c 85be91efdd544158551f31b9f5632d82 487 Gene3D G3DSA:3.90.480.10 23 329 1.4E-76 T 11-10-2018 syc2243_c 85be91efdd544158551f31b9f5632d82 487 TIGRFAM TIGR02435 CobG: precorrin-3B synthase 7 412 2.1E-78 T 11-10-2018 IPR012798 Cobalamin (vitamin B12) biosynthesis CobG-like syc2243_c 85be91efdd544158551f31b9f5632d82 487 SUPERFAMILY SSF56014 350 470 3.66E-18 T 11-10-2018 syc2243_c 85be91efdd544158551f31b9f5632d82 487 Gene3D G3DSA:3.30.413.10 348 479 4.0E-20 T 11-10-2018 syc2243_c 85be91efdd544158551f31b9f5632d82 487 SUPERFAMILY SSF55124 265 343 1.63E-14 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 syc2243_c 85be91efdd544158551f31b9f5632d82 487 SUPERFAMILY SSF55124 5 84 1.8E-14 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 syc2003_c aff431b443874bb9620a360aed74a946 432 Gene3D G3DSA:3.30.70.260 350 422 6.9E-148 T 11-10-2018 syc2003_c aff431b443874bb9620a360aed74a946 432 Pfam PF00742 Homoserine dehydrogenase 134 316 1.0E-66 T 11-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 syc2003_c aff431b443874bb9620a360aed74a946 432 SUPERFAMILY SSF55021 354 425 6.74E-15 T 11-10-2018 syc2003_c aff431b443874bb9620a360aed74a946 432 SUPERFAMILY SSF51735 3 155 4.26E-31 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily syc2003_c aff431b443874bb9620a360aed74a946 432 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 180 202 - T 11-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 syc2003_c aff431b443874bb9620a360aed74a946 432 SUPERFAMILY SSF55347 134 303 2.62E-51 T 11-10-2018 syc2003_c aff431b443874bb9620a360aed74a946 432 Gene3D G3DSA:3.30.360.10 133 349 6.9E-148 T 11-10-2018 syc2003_c aff431b443874bb9620a360aed74a946 432 PIRSF PIRSF000098 1 432 4.6E-158 T 11-10-2018 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 syc2003_c aff431b443874bb9620a360aed74a946 432 Gene3D G3DSA:3.40.50.720 4 341 6.9E-148 T 11-10-2018 syc2003_c aff431b443874bb9620a360aed74a946 432 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 9 126 5.5E-23 T 11-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 syc2003_c aff431b443874bb9620a360aed74a946 432 Pfam PF01842 ACT domain 356 420 2.1E-12 T 11-10-2018 IPR002912 ACT domain syc2118_d ca1cc272922334cba969f024143bebc6 111 SUPERFAMILY SSF52833 4 105 1.4E-30 T 11-10-2018 IPR036249 Thioredoxin-like superfamily syc2118_d ca1cc272922334cba969f024143bebc6 111 Gene3D G3DSA:3.40.30.10 1 104 5.0E-28 T 11-10-2018 syc2118_d ca1cc272922334cba969f024143bebc6 111 PIRSF PIRSF000077 1 105 2.5E-29 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 syc2118_d ca1cc272922334cba969f024143bebc6 111 PRINTS PR00421 Thioredoxin family signature 29 38 3.3E-5 T 11-10-2018 syc2118_d ca1cc272922334cba969f024143bebc6 111 PRINTS PR00421 Thioredoxin family signature 21 29 3.3E-5 T 11-10-2018 syc2118_d ca1cc272922334cba969f024143bebc6 111 PRINTS PR00421 Thioredoxin family signature 69 80 3.3E-5 T 11-10-2018 syc2118_d ca1cc272922334cba969f024143bebc6 111 ProSitePatterns PS00194 Thioredoxin family active site. 22 40 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 syc2118_d ca1cc272922334cba969f024143bebc6 111 Pfam PF00085 Thioredoxin 4 103 1.3E-24 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 syc1829_d e0c31c5cb2aa8b3fdec8460d9c98f8fc 344 Pfam PF05343 M42 glutamyl aminopeptidase 47 333 6.5E-57 T 11-10-2018 IPR008007 Peptidase M42 syc1829_d e0c31c5cb2aa8b3fdec8460d9c98f8fc 344 SUPERFAMILY SSF101821 71 185 5.34E-13 T 11-10-2018 syc1829_d e0c31c5cb2aa8b3fdec8460d9c98f8fc 344 PIRSF PIRSF001123 4 343 5.3E-36 T 11-10-2018 IPR008007 Peptidase M42 syc1829_d e0c31c5cb2aa8b3fdec8460d9c98f8fc 344 SUPERFAMILY SSF53187 9 341 3.87E-41 T 11-10-2018 syc1829_d e0c31c5cb2aa8b3fdec8460d9c98f8fc 344 Gene3D G3DSA:3.40.630.10 12 333 2.0E-50 T 11-10-2018 syc1829_d e0c31c5cb2aa8b3fdec8460d9c98f8fc 344 Gene3D G3DSA:2.40.30.40 70 166 2.0E-50 T 11-10-2018 IPR023367 Peptidase M42, domain 2 syc1960_c bfafb57a3a9136f1bc74fc7434bd3b13 475 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 282 395 1.1E-30 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 syc1960_c bfafb57a3a9136f1bc74fc7434bd3b13 475 Gene3D G3DSA:3.40.120.10 198 387 7.8E-63 T 11-10-2018 syc1960_c bfafb57a3a9136f1bc74fc7434bd3b13 475 SUPERFAMILY SSF53738 23 204 3.34E-45 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 syc1960_c bfafb57a3a9136f1bc74fc7434bd3b13 475 SUPERFAMILY SSF53738 282 389 3.06E-29 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 syc1960_c bfafb57a3a9136f1bc74fc7434bd3b13 475 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 120 129 - T 11-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 syc1960_c bfafb57a3a9136f1bc74fc7434bd3b13 475 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 181 278 6.9E-19 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 syc1960_c bfafb57a3a9136f1bc74fc7434bd3b13 475 Gene3D G3DSA:3.40.120.10 28 174 2.4E-45 T 11-10-2018 syc1960_c bfafb57a3a9136f1bc74fc7434bd3b13 475 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 26 473 42.017 T 11-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 syc1960_c bfafb57a3a9136f1bc74fc7434bd3b13 475 Gene3D G3DSA:3.40.120.10 281 364 7.8E-63 T 11-10-2018 syc1960_c bfafb57a3a9136f1bc74fc7434bd3b13 475 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 29 157 5.7E-42 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 syc1960_c bfafb57a3a9136f1bc74fc7434bd3b13 475 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 401 462 2.6E-11 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 syc1960_c bfafb57a3a9136f1bc74fc7434bd3b13 475 SUPERFAMILY SSF53738 180 279 1.29E-26 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 syc1960_c bfafb57a3a9136f1bc74fc7434bd3b13 475 SUPERFAMILY SSF55957 385 473 4.06E-20 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 syc1960_c bfafb57a3a9136f1bc74fc7434bd3b13 475 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 198 217 2.1E-13 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 syc1960_c bfafb57a3a9136f1bc74fc7434bd3b13 475 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 119 133 2.1E-13 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 syc1960_c bfafb57a3a9136f1bc74fc7434bd3b13 475 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 258 273 2.1E-13 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 syc1960_c bfafb57a3a9136f1bc74fc7434bd3b13 475 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 30 470 9.0E-175 T 11-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 syc1960_c bfafb57a3a9136f1bc74fc7434bd3b13 475 Gene3D G3DSA:3.30.310.50 396 474 5.1E-24 T 11-10-2018 syc2492_c 5d635ec65b363a9b9caeea3a03cac563 300 Hamap MF_00206 Lipoyl synthase [lipA]. 1 300 132.746 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 syc2492_c 5d635ec65b363a9b9caeea3a03cac563 300 TIGRFAM TIGR00510 lipA: lipoyl synthase 8 299 1.0E-102 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 syc2492_c 5d635ec65b363a9b9caeea3a03cac563 300 Gene3D G3DSA:3.20.20.70 58 278 5.4E-15 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 syc2492_c 5d635ec65b363a9b9caeea3a03cac563 300 PIRSF PIRSF005963 2 300 3.1E-123 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 syc2492_c 5d635ec65b363a9b9caeea3a03cac563 300 SUPERFAMILY SSF102114 26 296 1.15E-57 T 11-10-2018 syc2492_c 5d635ec65b363a9b9caeea3a03cac563 300 SMART SM00729 57 277 3.6E-9 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 syc2491_c b430bd18dc078168b374c7fa8d066548 138 Pfam PF05099 Tellurite resistance protein TerB 11 116 3.9E-7 T 11-10-2018 IPR007791 Co-chaperone DjlA, N-terminal syc2491_c b430bd18dc078168b374c7fa8d066548 138 Gene3D G3DSA:1.10.3680.10 4 129 8.1E-11 T 11-10-2018 IPR029024 TerB-like syc2491_c b430bd18dc078168b374c7fa8d066548 138 SUPERFAMILY SSF158682 9 121 2.35E-15 T 11-10-2018 IPR029024 TerB-like syc1694_c dc325685575d7641be2f390a32153286 123 Gene3D G3DSA:2.30.29.50 13 120 1.4E-29 T 11-10-2018 IPR037063 Bacterial Pleckstrin homology domain superfamily syc1694_c dc325685575d7641be2f390a32153286 123 Pfam PF08000 Bacterial PH domain 23 98 2.7E-27 T 11-10-2018 IPR012544 Bacterial Pleckstrin homology domain syc1694_c dc325685575d7641be2f390a32153286 123 SUPERFAMILY SSF50729 24 97 4.1E-26 T 11-10-2018 syc2513_d a8e7358e5198a9fff9f38b9b9560ecc9 838 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 630 641 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site syc2513_d a8e7358e5198a9fff9f38b9b9560ecc9 838 SUPERFAMILY SSF54862 554 648 1.67E-7 T 11-10-2018 syc2513_d a8e7358e5198a9fff9f38b9b9560ecc9 838 Gene3D G3DSA:2.60.120.10 5 143 1.2E-12 T 11-10-2018 IPR014710 RmlC-like jelly roll fold syc2513_d a8e7358e5198a9fff9f38b9b9560ecc9 838 Gene3D G3DSA:3.40.50.300 155 317 1.6E-19 T 11-10-2018 syc2513_d a8e7358e5198a9fff9f38b9b9560ecc9 838 Gene3D G3DSA:1.10.8.60 318 383 3.8E-16 T 11-10-2018 syc2513_d a8e7358e5198a9fff9f38b9b9560ecc9 838 SUPERFAMILY SSF52540 160 389 3.6E-27 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc2513_d a8e7358e5198a9fff9f38b9b9560ecc9 838 Pfam PF00158 Sigma-54 interaction domain 161 278 9.2E-14 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 syc2513_d a8e7358e5198a9fff9f38b9b9560ecc9 838 Pfam PF12801 4Fe-4S binding domain 453 495 5.2E-5 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain syc2513_d a8e7358e5198a9fff9f38b9b9560ecc9 838 Pfam PF12801 4Fe-4S binding domain 541 578 1.9E-6 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain syc2513_d a8e7358e5198a9fff9f38b9b9560ecc9 838 SUPERFAMILY SSF51206 5 131 6.02E-15 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like syc1003_d aae2f04fc91b6e257bc862129fca853f 775 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 31 575 4.5E-126 T 11-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 syc1003_d aae2f04fc91b6e257bc862129fca853f 775 Gene3D G3DSA:3.90.1640.30 65 339 2.6E-70 T 11-10-2018 syc1003_d aae2f04fc91b6e257bc862129fca853f 775 SUPERFAMILY SSF64182 68 466 6.15E-88 T 11-10-2018 IPR038763 DHH phosphoesterase superfamily syc1003_d aae2f04fc91b6e257bc862129fca853f 775 Gene3D G3DSA:3.10.310.30 340 466 3.9E-28 T 11-10-2018 syc1003_d aae2f04fc91b6e257bc862129fca853f 775 Pfam PF02272 DHHA1 domain 335 460 2.1E-12 T 11-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 syc1003_d aae2f04fc91b6e257bc862129fca853f 775 Pfam PF01368 DHH family 88 227 9.9E-7 T 11-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 syc0535_d 1e188af1be78710901fcb54093651cbb 243 Gene3D G3DSA:3.30.70.580 68 226 1.6E-56 T 11-10-2018 syc0535_d 1e188af1be78710901fcb54093651cbb 243 SMART SM00363 3 64 3.8E-11 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc0535_d 1e188af1be78710901fcb54093651cbb 243 Gene3D G3DSA:3.10.290.10 1 58 2.2E-22 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 syc0535_d 1e188af1be78710901fcb54093651cbb 243 SUPERFAMILY SSF55120 65 233 3.78E-46 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 syc0535_d 1e188af1be78710901fcb54093651cbb 243 Gene3D G3DSA:3.30.70.1560 128 218 1.6E-56 T 11-10-2018 syc0535_d 1e188af1be78710901fcb54093651cbb 243 Pfam PF00849 RNA pseudouridylate synthase 66 198 1.3E-18 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 syc0535_d 1e188af1be78710901fcb54093651cbb 243 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 70 229 2.4E-52 T 11-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 syc0535_d 1e188af1be78710901fcb54093651cbb 243 Pfam PF01479 S4 domain 3 38 7.8E-14 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc0535_d 1e188af1be78710901fcb54093651cbb 243 SUPERFAMILY SSF55174 3 92 3.97E-16 T 11-10-2018 syc2132_d 0698e4c17a9bf9b007536e0b2906fd78 298 PIRSF PIRSF028757 3 296 2.5E-63 T 11-10-2018 IPR003507 Peptidase family S66 syc2132_d 0698e4c17a9bf9b007536e0b2906fd78 298 Gene3D G3DSA:3.50.30.60 162 295 1.4E-39 T 11-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily syc2132_d 0698e4c17a9bf9b007536e0b2906fd78 298 SUPERFAMILY SSF141986 142 291 2.88E-43 T 11-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily syc2132_d 0698e4c17a9bf9b007536e0b2906fd78 298 SUPERFAMILY SSF52317 3 163 1.74E-41 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like syc2132_d 0698e4c17a9bf9b007536e0b2906fd78 298 Gene3D G3DSA:3.40.50.10740 5 155 1.3E-34 T 11-10-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal syc2132_d 0698e4c17a9bf9b007536e0b2906fd78 298 Pfam PF02016 LD-carboxypeptidase 18 287 4.2E-72 T 11-10-2018 IPR003507 Peptidase family S66 syc0978_d bbb971dd8f5aa21a984c7f3ebc6042f1 187 SUPERFAMILY SSF52218 3 184 4.39E-41 T 11-10-2018 IPR029039 Flavoprotein-like superfamily syc0978_d bbb971dd8f5aa21a984c7f3ebc6042f1 187 Gene3D G3DSA:3.40.50.360 1 187 2.9E-46 T 11-10-2018 IPR029039 Flavoprotein-like superfamily syc0978_d bbb971dd8f5aa21a984c7f3ebc6042f1 187 Pfam PF03358 NADPH-dependent FMN reductase 3 152 9.1E-36 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 syc2279_d 7b3b76eff79bb8e745bc88342861fe41 411 Gene3D G3DSA:3.40.50.12740 172 405 2.6E-47 T 11-10-2018 syc2279_d 7b3b76eff79bb8e745bc88342861fe41 411 Pfam PF00072 Response regulator receiver domain 176 286 1.2E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 syc2279_d 7b3b76eff79bb8e745bc88342861fe41 411 SMART SM00448 173 286 1.3E-40 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 syc2279_d 7b3b76eff79bb8e745bc88342861fe41 411 SUPERFAMILY SSF47384 12 67 2.16E-10 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 syc2279_d 7b3b76eff79bb8e745bc88342861fe41 411 SUPERFAMILY SSF52172 172 308 2.7E-42 T 11-10-2018 IPR011006 CheY-like superfamily syc2279_d 7b3b76eff79bb8e745bc88342861fe41 411 Pfam PF00512 His Kinase A (phospho-acceptor) domain 11 70 1.9E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 syc2279_d 7b3b76eff79bb8e745bc88342861fe41 411 Gene3D G3DSA:1.10.287.130 5 68 3.3E-12 T 11-10-2018 syc2279_d 7b3b76eff79bb8e745bc88342861fe41 411 SMART SM00388 73 138 0.053 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 syc2279_d 7b3b76eff79bb8e745bc88342861fe41 411 SMART SM00388 7 71 3.6E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 syc1497_d 2f04b835a0079b845d03926b9804a2c0 273 Pfam PF13419 Haloacid dehalogenase-like hydrolase 65 238 1.3E-29 T 11-10-2018 syc1497_d 2f04b835a0079b845d03926b9804a2c0 273 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 143 232 2.0E-6 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 syc1497_d 2f04b835a0079b845d03926b9804a2c0 273 Gene3D G3DSA:1.10.150.240 76 140 1.6E-37 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 syc1497_d 2f04b835a0079b845d03926b9804a2c0 273 Gene3D G3DSA:3.40.50.1000 65 260 1.6E-37 T 11-10-2018 IPR023214 HAD superfamily syc1497_d 2f04b835a0079b845d03926b9804a2c0 273 SUPERFAMILY SSF56784 50 268 2.13E-45 T 11-10-2018 IPR036412 HAD-like superfamily syc2265_c 1d88305332fa7bb6075c63ef27c8a490 256 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 3 235 1.1E-80 T 11-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 syc2265_c 1d88305332fa7bb6075c63ef27c8a490 256 Pfam PF00977 Histidine biosynthesis protein 3 230 1.2E-81 T 11-10-2018 IPR006062 Histidine biosynthesis GO:0000105 syc2265_c 1d88305332fa7bb6075c63ef27c8a490 256 Gene3D G3DSA:3.20.20.70 3 246 5.7E-91 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 syc2265_c 1d88305332fa7bb6075c63ef27c8a490 256 SUPERFAMILY SSF51366 1 237 3.16E-75 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 syc2265_c 1d88305332fa7bb6075c63ef27c8a490 256 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 238 37.748 T 11-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 syc0149_d 4b611b268dcacfee4c622f67987ff86b 368 Pfam PF00005 ABC transporter 25 166 6.7E-36 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 syc0149_d 4b611b268dcacfee4c622f67987ff86b 368 Gene3D G3DSA:3.40.50.300 4 257 2.2E-73 T 11-10-2018 syc0149_d 4b611b268dcacfee4c622f67987ff86b 368 SUPERFAMILY SSF50331 242 346 3.34E-8 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal syc0149_d 4b611b268dcacfee4c622f67987ff86b 368 SMART SM00382 33 224 1.0E-18 T 11-10-2018 IPR003593 AAA+ ATPase domain syc0149_d 4b611b268dcacfee4c622f67987ff86b 368 SUPERFAMILY SSF52540 7 248 2.79E-80 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0149_d 4b611b268dcacfee4c622f67987ff86b 368 Pfam PF08402 TOBE domain 279 346 4.9E-7 T 11-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 syc0149_d 4b611b268dcacfee4c622f67987ff86b 368 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 syc0848_d 0bca8b718f1839b30c65bf87a3b3d3b9 232 SUPERFAMILY SSF53448 2 223 2.01E-56 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases syc0848_d 0bca8b718f1839b30c65bf87a3b3d3b9 232 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 1 222 42.984 T 11-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 syc0848_d 0bca8b718f1839b30c65bf87a3b3d3b9 232 Gene3D G3DSA:3.90.550.10 1 230 8.6E-75 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases syc0848_d 0bca8b718f1839b30c65bf87a3b3d3b9 232 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 99 106 - T 11-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 syc0848_d 0bca8b718f1839b30c65bf87a3b3d3b9 232 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 3 222 2.0E-73 T 11-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 syc0848_d 0bca8b718f1839b30c65bf87a3b3d3b9 232 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2 224 2.7E-78 T 11-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 syc1638_c 6dd6d1119137529ad907985f5c6e2f70 206 SMART SM00862 119 194 4.0E-24 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 syc1638_c 6dd6d1119137529ad907985f5c6e2f70 206 Gene3D G3DSA:3.40.50.2300 1 90 5.9E-24 T 11-10-2018 syc1638_c 6dd6d1119137529ad907985f5c6e2f70 206 Pfam PF00486 Transcriptional regulatory protein, C terminal 119 194 6.9E-24 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 syc1638_c 6dd6d1119137529ad907985f5c6e2f70 206 SUPERFAMILY SSF52172 4 106 1.76E-25 T 11-10-2018 IPR011006 CheY-like superfamily syc1638_c 6dd6d1119137529ad907985f5c6e2f70 206 Pfam PF00072 Response regulator receiver domain 2 86 2.0E-15 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 syc1638_c 6dd6d1119137529ad907985f5c6e2f70 206 Gene3D G3DSA:1.10.10.10 91 200 9.1E-34 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily syc1638_c 6dd6d1119137529ad907985f5c6e2f70 206 SUPERFAMILY SSF46894 94 195 2.64E-27 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 syc1638_c 6dd6d1119137529ad907985f5c6e2f70 206 SMART SM00448 1 86 3.0E-7 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 syc1530_d dedaede87dfab31e5b658eee38ae42ba 749 Gene3D G3DSA:2.60.34.10 372 551 3.1E-73 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 syc1530_d dedaede87dfab31e5b658eee38ae42ba 749 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 syc1530_d dedaede87dfab31e5b658eee38ae42ba 749 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 332 346 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 syc1530_d dedaede87dfab31e5b658eee38ae42ba 749 Gene3D G3DSA:3.30.420.40 180 361 1.4E-149 T 11-10-2018 syc1530_d dedaede87dfab31e5b658eee38ae42ba 749 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 651 36.091 T 11-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 syc1530_d dedaede87dfab31e5b658eee38ae42ba 749 SUPERFAMILY SSF53067 1 183 3.4E-58 T 11-10-2018 syc1530_d dedaede87dfab31e5b658eee38ae42ba 749 SUPERFAMILY SSF53067 186 377 1.17E-67 T 11-10-2018 syc1530_d dedaede87dfab31e5b658eee38ae42ba 749 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 191 204 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 syc1530_d dedaede87dfab31e5b658eee38ae42ba 749 Gene3D G3DSA:3.90.640.10 224 311 1.4E-149 T 11-10-2018 syc1530_d dedaede87dfab31e5b658eee38ae42ba 749 PRINTS PR00301 70kDa heat shock protein signature 197 207 1.1E-74 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 syc1530_d dedaede87dfab31e5b658eee38ae42ba 749 PRINTS PR00301 70kDa heat shock protein signature 54 62 1.1E-74 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 syc1530_d dedaede87dfab31e5b658eee38ae42ba 749 PRINTS PR00301 70kDa heat shock protein signature 31 43 1.1E-74 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 syc1530_d dedaede87dfab31e5b658eee38ae42ba 749 PRINTS PR00301 70kDa heat shock protein signature 138 158 1.1E-74 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 syc1530_d dedaede87dfab31e5b658eee38ae42ba 749 PRINTS PR00301 70kDa heat shock protein signature 383 402 1.1E-74 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 syc1530_d dedaede87dfab31e5b658eee38ae42ba 749 PRINTS PR00301 70kDa heat shock protein signature 360 380 1.1E-74 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 syc1530_d dedaede87dfab31e5b658eee38ae42ba 749 PRINTS PR00301 70kDa heat shock protein signature 464 480 1.1E-74 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 syc1530_d dedaede87dfab31e5b658eee38ae42ba 749 PRINTS PR00301 70kDa heat shock protein signature 3 16 1.1E-74 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 syc1530_d dedaede87dfab31e5b658eee38ae42ba 749 PRINTS PR00301 70kDa heat shock protein signature 329 345 1.1E-74 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 syc1530_d dedaede87dfab31e5b658eee38ae42ba 749 SUPERFAMILY SSF100920 379 534 3.4E-57 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 syc1530_d dedaede87dfab31e5b658eee38ae42ba 749 Pfam PF00012 Hsp70 protein 4 599 9.0E-244 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 syc1530_d dedaede87dfab31e5b658eee38ae42ba 749 Gene3D G3DSA:3.30.420.40 5 371 1.4E-149 T 11-10-2018 syc1530_d dedaede87dfab31e5b658eee38ae42ba 749 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 600 4.0E-275 T 11-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 syc2140_d 7bac630f0ab0244854364ad959d07688 564 Pfam PF06418 CTP synthase N-terminus 21 285 3.4E-128 T 11-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 syc2140_d 7bac630f0ab0244854364ad959d07688 564 Gene3D G3DSA:3.40.50.300 10 303 4.7E-136 T 11-10-2018 syc2140_d 7bac630f0ab0244854364ad959d07688 564 Gene3D G3DSA:3.40.50.880 304 555 3.2E-100 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like syc2140_d 7bac630f0ab0244854364ad959d07688 564 SUPERFAMILY SSF52540 19 289 2.03E-124 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc2140_d 7bac630f0ab0244854364ad959d07688 564 Hamap MF_01227 CTP synthase [pyrG]. 20 550 52.444 T 11-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 syc2140_d 7bac630f0ab0244854364ad959d07688 564 Pfam PF00117 Glutamine amidotransferase class-I 320 545 1.2E-55 T 11-10-2018 IPR017926 Glutamine amidotransferase syc2140_d 7bac630f0ab0244854364ad959d07688 564 SUPERFAMILY SSF52317 308 547 2.21E-78 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like syc2140_d 7bac630f0ab0244854364ad959d07688 564 TIGRFAM TIGR00337 PyrG: CTP synthase 19 545 1.6E-254 T 11-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 syc2160_c 6f1274686be642c8e042a973bd42aa57 485 Gene3D G3DSA:3.40.710.10 45 142 1.1E-7 T 11-10-2018 syc2160_c 6f1274686be642c8e042a973bd42aa57 485 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 437 450 4.3E-28 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 syc2160_c 6f1274686be642c8e042a973bd42aa57 485 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 84 103 4.3E-28 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 syc2160_c 6f1274686be642c8e042a973bd42aa57 485 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 375 389 4.3E-28 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 syc2160_c 6f1274686be642c8e042a973bd42aa57 485 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 300 322 4.3E-28 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 syc2160_c 6f1274686be642c8e042a973bd42aa57 485 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 360 374 4.3E-28 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 syc2160_c 6f1274686be642c8e042a973bd42aa57 485 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 49 464 4.1E-77 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 syc2160_c 6f1274686be642c8e042a973bd42aa57 485 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 72 459 8.4E-68 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 syc2160_c 6f1274686be642c8e042a973bd42aa57 485 Gene3D G3DSA:3.40.710.10 249 478 8.3E-53 T 11-10-2018 syc2160_c 6f1274686be642c8e042a973bd42aa57 485 SUPERFAMILY SSF56601 62 480 5.04E-71 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like syc1442_d e1fdcf1ebfde230b3ba0755c684d944d 181 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 8 178 3.4E-59 T 11-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 syc1442_d e1fdcf1ebfde230b3ba0755c684d944d 181 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 7 178 5.6E-49 T 11-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 syc1442_d e1fdcf1ebfde230b3ba0755c684d944d 181 SUPERFAMILY SSF51182 5 179 3.8E-61 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily syc1442_d e1fdcf1ebfde230b3ba0755c684d944d 181 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 6 178 1.0E-96 T 11-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 syc1442_d e1fdcf1ebfde230b3ba0755c684d944d 181 Gene3D G3DSA:2.60.120.10 4 181 1.1E-60 T 11-10-2018 IPR014710 RmlC-like jelly roll fold syc1886_d 6e0b8269bf81af8ec74e88c8089bd7b4 125 ProSitePatterns PS00646 Ribosomal protein S13 signature. 88 101 - T 11-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc1886_d 6e0b8269bf81af8ec74e88c8089bd7b4 125 Gene3D G3DSA:4.10.910.10 75 125 1.4E-22 T 11-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc1886_d 6e0b8269bf81af8ec74e88c8089bd7b4 125 PIRSF PIRSF002134 1 125 6.3E-43 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc1886_d 6e0b8269bf81af8ec74e88c8089bd7b4 125 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 119 26.631 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc1886_d 6e0b8269bf81af8ec74e88c8089bd7b4 125 Pfam PF00416 Ribosomal protein S13/S18 3 109 6.4E-29 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc1886_d 6e0b8269bf81af8ec74e88c8089bd7b4 125 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 115 3.4E-51 T 11-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc1886_d 6e0b8269bf81af8ec74e88c8089bd7b4 125 SUPERFAMILY SSF46946 2 122 1.22E-45 T 11-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 syc1886_d 6e0b8269bf81af8ec74e88c8089bd7b4 125 Gene3D G3DSA:1.10.8.50 1 72 9.4E-31 T 11-10-2018 syc2059_d 399b33d6988b045ab6ea88937dbb8fd0 233 SUPERFAMILY SSF55961 107 201 1.92E-19 T 11-10-2018 syc2059_d 399b33d6988b045ab6ea88937dbb8fd0 233 Gene3D G3DSA:3.30.530.90 135 208 4.5E-9 T 11-10-2018 syc2059_d 399b33d6988b045ab6ea88937dbb8fd0 233 Pfam PF00355 Rieske [2Fe-2S] domain 7 89 6.0E-23 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 syc2059_d 399b33d6988b045ab6ea88937dbb8fd0 233 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 47 69 - T 11-10-2018 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0051537|GO:0055114 syc2059_d 399b33d6988b045ab6ea88937dbb8fd0 233 Gene3D G3DSA:2.102.10.10 3 134 3.0E-39 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 syc2059_d 399b33d6988b045ab6ea88937dbb8fd0 233 SUPERFAMILY SSF50022 2 115 4.84E-34 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 syc1567_d 1b6d9c068aa2fc87025055f627cd89c4 235 Pfam PF03167 Uracil DNA glycosylase superfamily 71 221 7.8E-45 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 syc1567_d 1b6d9c068aa2fc87025055f627cd89c4 235 SMART SM00987 70 222 1.9E-43 T 11-10-2018 syc1567_d 1b6d9c068aa2fc87025055f627cd89c4 235 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 56 224 2.5E-59 T 11-10-2018 IPR005273 Uracil-DNA glycosylase family 4 syc1567_d 1b6d9c068aa2fc87025055f627cd89c4 235 SUPERFAMILY SSF52141 46 231 1.8E-65 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 syc1567_d 1b6d9c068aa2fc87025055f627cd89c4 235 Gene3D G3DSA:3.40.470.10 45 234 4.2E-73 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 syc1567_d 1b6d9c068aa2fc87025055f627cd89c4 235 SMART SM00986 70 222 1.9E-43 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 syc1865_d d5390875fe4b668e68efb42332b776c1 213 ProSitePatterns PS00474 Ribosomal protein L3 signature. 102 125 - T 11-10-2018 IPR019926 Ribosomal protein L3, conserved site syc1865_d d5390875fe4b668e68efb42332b776c1 213 SUPERFAMILY SSF50447 3 209 1.68E-77 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily syc1865_d d5390875fe4b668e68efb42332b776c1 213 Gene3D G3DSA:2.40.30.10 127 208 5.6E-13 T 11-10-2018 syc1865_d d5390875fe4b668e68efb42332b776c1 213 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 207 39.242 T 11-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc1865_d d5390875fe4b668e68efb42332b776c1 213 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 203 6.9E-83 T 11-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc1865_d d5390875fe4b668e68efb42332b776c1 213 Gene3D G3DSA:2.40.50.620 33 97 4.9E-15 T 11-10-2018 syc1865_d d5390875fe4b668e68efb42332b776c1 213 Pfam PF00297 Ribosomal protein L3 95 182 3.4E-13 T 11-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc0260_d eb556a89d53667297996abb526de7ee8 811 SUPERFAMILY SSF55681 486 699 1.29E-42 T 11-10-2018 syc0260_d eb556a89d53667297996abb526de7ee8 811 Gene3D G3DSA:2.40.50.140 39 157 8.2E-65 T 11-10-2018 syc0260_d eb556a89d53667297996abb526de7ee8 811 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 810 5.1E-227 T 11-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 syc0260_d eb556a89d53667297996abb526de7ee8 811 Gene3D G3DSA:3.30.70.380 718 811 1.4E-29 T 11-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 syc0260_d eb556a89d53667297996abb526de7ee8 811 Gene3D G3DSA:3.30.930.10 509 698 2.0E-49 T 11-10-2018 syc0260_d eb556a89d53667297996abb526de7ee8 811 SMART SM00896 717 810 6.4E-45 T 11-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 syc0260_d eb556a89d53667297996abb526de7ee8 811 SMART SM00873 215 394 7.2E-81 T 11-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 syc0260_d eb556a89d53667297996abb526de7ee8 811 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 804 41.063 T 11-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 syc0260_d eb556a89d53667297996abb526de7ee8 811 Pfam PF03483 B3/4 domain 218 394 3.7E-62 T 11-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 syc0260_d eb556a89d53667297996abb526de7ee8 811 SUPERFAMILY SSF46955 413 493 1.46E-13 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily syc0260_d eb556a89d53667297996abb526de7ee8 811 Gene3D G3DSA:3.30.56.10 410 493 3.8E-19 T 11-10-2018 syc0260_d eb556a89d53667297996abb526de7ee8 811 Pfam PF01588 Putative tRNA binding domain 45 147 2.6E-27 T 11-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 syc0260_d eb556a89d53667297996abb526de7ee8 811 SUPERFAMILY SSF54991 711 810 4.97E-32 T 11-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 syc0260_d eb556a89d53667297996abb526de7ee8 811 SMART SM00874 411 490 5.4E-25 T 11-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 syc0260_d eb556a89d53667297996abb526de7ee8 811 SUPERFAMILY SSF56037 217 403 7.32E-63 T 11-10-2018 syc0260_d eb556a89d53667297996abb526de7ee8 811 Gene3D G3DSA:3.30.56.10 4 184 8.2E-65 T 11-10-2018 syc0260_d eb556a89d53667297996abb526de7ee8 811 Pfam PF03147 Ferredoxin-fold anticodon binding domain 717 810 1.8E-30 T 11-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 syc0260_d eb556a89d53667297996abb526de7ee8 811 SUPERFAMILY SSF50249 36 197 1.74E-43 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold syc0260_d eb556a89d53667297996abb526de7ee8 811 Pfam PF03484 tRNA synthetase B5 domain 414 490 4.7E-21 T 11-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 syc0260_d eb556a89d53667297996abb526de7ee8 811 Gene3D G3DSA:3.50.40.10 209 409 5.0E-73 T 11-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 syc0936_c c1ce4777b07f9585e191aa0950e82443 909 TIGRFAM TIGR00422 valS: valine--tRNA ligase 9 889 0.0 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 syc0936_c c1ce4777b07f9585e191aa0950e82443 909 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 843 908 1.4E-18 T 11-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 syc0936_c c1ce4777b07f9585e191aa0950e82443 909 Pfam PF08264 Anticodon-binding domain of tRNA 635 782 7.8E-44 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 syc0936_c c1ce4777b07f9585e191aa0950e82443 909 PRINTS PR00986 Valyl-tRNA synthetase signature 42 53 7.4E-38 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 syc0936_c c1ce4777b07f9585e191aa0950e82443 909 PRINTS PR00986 Valyl-tRNA synthetase signature 463 484 7.4E-38 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 syc0936_c c1ce4777b07f9585e191aa0950e82443 909 PRINTS PR00986 Valyl-tRNA synthetase signature 236 253 7.4E-38 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 syc0936_c c1ce4777b07f9585e191aa0950e82443 909 PRINTS PR00986 Valyl-tRNA synthetase signature 351 364 7.4E-38 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 syc0936_c c1ce4777b07f9585e191aa0950e82443 909 PRINTS PR00986 Valyl-tRNA synthetase signature 494 512 7.4E-38 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 syc0936_c c1ce4777b07f9585e191aa0950e82443 909 SUPERFAMILY SSF52374 9 584 4.1E-136 T 11-10-2018 syc0936_c c1ce4777b07f9585e191aa0950e82443 909 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 49 60 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 syc0936_c c1ce4777b07f9585e191aa0950e82443 909 Gene3D G3DSA:1.10.287.380 836 908 6.4E-18 T 11-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 syc0936_c c1ce4777b07f9585e191aa0950e82443 909 Gene3D G3DSA:3.90.740.10 181 347 0.0 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 syc0936_c c1ce4777b07f9585e191aa0950e82443 909 Hamap MF_02004 Valine--tRNA ligase [valS]. 8 908 15.982 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 syc0936_c c1ce4777b07f9585e191aa0950e82443 909 Gene3D G3DSA:1.10.730.10 8 771 0.0 T 11-10-2018 syc0936_c c1ce4777b07f9585e191aa0950e82443 909 SUPERFAMILY SSF50677 197 347 7.85E-65 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 syc0936_c c1ce4777b07f9585e191aa0950e82443 909 Gene3D G3DSA:3.40.50.620 28 543 0.0 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold syc0936_c c1ce4777b07f9585e191aa0950e82443 909 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 21 582 5.9E-214 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 syc0936_c c1ce4777b07f9585e191aa0950e82443 909 SUPERFAMILY SSF46589 843 907 4.97E-14 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 syc0936_c c1ce4777b07f9585e191aa0950e82443 909 SUPERFAMILY SSF47323 602 858 6.54E-73 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 syc1154_c b5b18c3df7781de519d920e63606832e 395 Pfam PF00149 Calcineurin-like phosphoesterase 7 225 2.8E-20 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 syc1154_c b5b18c3df7781de519d920e63606832e 395 PIRSF PIRSF035427 1 384 2.3E-213 T 11-10-2018 IPR011239 Phosphoesterase cyanobacterial, all2852 syc1154_c b5b18c3df7781de519d920e63606832e 395 Gene3D G3DSA:3.60.21.10 1 285 9.5E-49 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like syc1154_c b5b18c3df7781de519d920e63606832e 395 SUPERFAMILY SSF56300 7 258 8.66E-45 T 11-10-2018 syc2159_d 1926a41b6f0f8f55c68cdbf55f542270 262 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 186 197 1.1E-8 T 11-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial syc2159_d 1926a41b6f0f8f55c68cdbf55f542270 262 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 114 131 1.1E-8 T 11-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial syc2159_d 1926a41b6f0f8f55c68cdbf55f542270 262 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 198 213 1.1E-8 T 11-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial syc2159_d 1926a41b6f0f8f55c68cdbf55f542270 262 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 12 95 2.9E-32 T 11-10-2018 IPR010627 Peptidase A24A, N-terminal syc2159_d 1926a41b6f0f8f55c68cdbf55f542270 262 Pfam PF01478 Type IV leader peptidase family 106 217 3.1E-19 T 11-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 syc0244_c 954508292b9e20e554f37c32600bf4f4 310 SUPERFAMILY SSF51730 4 293 6.47E-74 T 11-10-2018 IPR029041 FAD-linked oxidoreductase-like syc0244_c 954508292b9e20e554f37c32600bf4f4 310 Pfam PF02219 Methylenetetrahydrofolate reductase 5 292 6.3E-53 T 11-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 syc0244_c 954508292b9e20e554f37c32600bf4f4 310 Gene3D G3DSA:3.20.20.220 7 296 2.2E-53 T 11-10-2018 syc0379_d 6fad0eaaa9bb21aac927ba83ffab1e0c 503 Gene3D G3DSA:1.10.579.10 318 438 7.0E-51 T 11-10-2018 syc0379_d 6fad0eaaa9bb21aac927ba83ffab1e0c 503 SUPERFAMILY SSF48173 224 491 1.03E-61 T 11-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 syc0379_d 6fad0eaaa9bb21aac927ba83ffab1e0c 503 Gene3D G3DSA:1.10.10.1710 439 503 1.8E-23 T 11-10-2018 syc0379_d 6fad0eaaa9bb21aac927ba83ffab1e0c 503 Gene3D G3DSA:1.25.40.80 127 313 1.8E-111 T 11-10-2018 syc0379_d 6fad0eaaa9bb21aac927ba83ffab1e0c 503 Gene3D G3DSA:3.40.50.620 6 225 1.8E-111 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold syc0379_d 6fad0eaaa9bb21aac927ba83ffab1e0c 503 Pfam PF04244 Deoxyribodipyrimidine photo-lyase-related protein 5 223 9.1E-76 T 11-10-2018 IPR007357 Deoxyribodipyrimidine photolyase-related protein syc0646_d 0a34ae8e94bd09a6469e092dab85f558 190 ProSitePatterns PS01128 Shikimate kinase signature. 65 90 - T 11-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 syc0646_d 0a34ae8e94bd09a6469e092dab85f558 190 PRINTS PR01100 Shikimate kinase family signature 64 72 5.3E-27 T 11-10-2018 syc0646_d 0a34ae8e94bd09a6469e092dab85f558 190 PRINTS PR01100 Shikimate kinase family signature 36 49 5.3E-27 T 11-10-2018 syc0646_d 0a34ae8e94bd09a6469e092dab85f558 190 PRINTS PR01100 Shikimate kinase family signature 82 91 5.3E-27 T 11-10-2018 syc0646_d 0a34ae8e94bd09a6469e092dab85f558 190 PRINTS PR01100 Shikimate kinase family signature 12 27 5.3E-27 T 11-10-2018 syc0646_d 0a34ae8e94bd09a6469e092dab85f558 190 PRINTS PR01100 Shikimate kinase family signature 102 119 5.3E-27 T 11-10-2018 syc0646_d 0a34ae8e94bd09a6469e092dab85f558 190 Hamap MF_00109 Shikimate kinase [aroK]. 9 173 28.37 T 11-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 syc0646_d 0a34ae8e94bd09a6469e092dab85f558 190 Pfam PF01202 Shikimate kinase 18 173 1.8E-52 T 11-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 syc0646_d 0a34ae8e94bd09a6469e092dab85f558 190 SUPERFAMILY SSF52540 12 173 4.28E-30 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0646_d 0a34ae8e94bd09a6469e092dab85f558 190 Gene3D G3DSA:3.40.50.300 2 185 1.0E-59 T 11-10-2018 syc2512_d 3ca4a95fc831314feadb98ef27ee81d7 263 Pfam PF12483 E3 Ubiquitin ligase 95 257 1.1E-48 T 11-10-2018 IPR022170 E3 Ubiquitin ligase, GIDE-type GO:0004842|GO:0006996|GO:0016567 MetaCyc: PWY-7511|Reactome: R-HSA-5689880 syc0561_c 5bc55c9a5f0803a8ee524e3becc86b1f 228 SMART SM01133 9 218 9.7E-71 T 11-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 syc0561_c 5bc55c9a5f0803a8ee524e3becc86b1f 228 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 10 215 9.4E-64 T 11-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 syc0561_c 5bc55c9a5f0803a8ee524e3becc86b1f 228 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 8 220 28.721 T 11-10-2018 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 syc0561_c 5bc55c9a5f0803a8ee524e3becc86b1f 228 SUPERFAMILY SSF51569 7 218 2.72E-65 T 11-10-2018 syc0561_c 5bc55c9a5f0803a8ee524e3becc86b1f 228 Gene3D G3DSA:3.20.20.70 1 222 2.3E-67 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 syc0561_c 5bc55c9a5f0803a8ee524e3becc86b1f 228 Pfam PF01791 DeoC/LacD family aldolase 21 213 6.7E-10 T 11-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 syc0561_c 5bc55c9a5f0803a8ee524e3becc86b1f 228 PIRSF PIRSF001357 5 225 1.4E-62 T 11-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 syc0034_c f88267bd5fb903646ac4805f71133e8e 584 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 7 90 2.1E-24 T 11-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 syc0034_c f88267bd5fb903646ac4805f71133e8e 584 SMART SM00836 468 584 3.4E-38 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 syc0034_c f88267bd5fb903646ac4805f71133e8e 584 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 126 137 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 syc0034_c f88267bd5fb903646ac4805f71133e8e 584 SUPERFAMILY SSF47323 463 584 4.58E-34 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 syc0034_c f88267bd5fb903646ac4805f71133e8e 584 Hamap MF_00123 Arginine--tRNA ligase [argS]. 6 584 27.724 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 syc0034_c f88267bd5fb903646ac4805f71133e8e 584 Gene3D G3DSA:3.40.50.620 115 466 5.0E-114 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold syc0034_c f88267bd5fb903646ac4805f71133e8e 584 Gene3D G3DSA:3.30.1360.70 5 109 6.4E-29 T 11-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 syc0034_c f88267bd5fb903646ac4805f71133e8e 584 Pfam PF00750 tRNA synthetases class I (R) 107 454 2.8E-129 T 11-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 syc0034_c f88267bd5fb903646ac4805f71133e8e 584 Pfam PF05746 DALR anticodon binding domain 468 584 1.2E-33 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 syc0034_c f88267bd5fb903646ac4805f71133e8e 584 SUPERFAMILY SSF52374 113 459 7.04E-96 T 11-10-2018 syc0034_c f88267bd5fb903646ac4805f71133e8e 584 SUPERFAMILY SSF55190 8 101 9.42E-24 T 11-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 syc0034_c f88267bd5fb903646ac4805f71133e8e 584 PRINTS PR01038 Arginyl-tRNA synthetase signature 307 328 5.6E-29 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 syc0034_c f88267bd5fb903646ac4805f71133e8e 584 PRINTS PR01038 Arginyl-tRNA synthetase signature 133 149 5.6E-29 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 syc0034_c f88267bd5fb903646ac4805f71133e8e 584 PRINTS PR01038 Arginyl-tRNA synthetase signature 118 133 5.6E-29 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 syc0034_c f88267bd5fb903646ac4805f71133e8e 584 PRINTS PR01038 Arginyl-tRNA synthetase signature 157 170 5.6E-29 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 syc0034_c f88267bd5fb903646ac4805f71133e8e 584 SMART SM01016 6 90 6.2E-34 T 11-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 syc0034_c f88267bd5fb903646ac4805f71133e8e 584 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 7 584 2.1E-181 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 syc0034_c f88267bd5fb903646ac4805f71133e8e 584 Gene3D G3DSA:1.10.730.10 467 584 4.1E-33 T 11-10-2018 syc0652_d 1ff3c575555d4d3cbf08d583a7702ca4 119 Gene3D G3DSA:2.60.120.10 6 106 5.9E-17 T 11-10-2018 IPR014710 RmlC-like jelly roll fold syc0652_d 1ff3c575555d4d3cbf08d583a7702ca4 119 Pfam PF01050 Mannose-6-phosphate isomerase 7 110 2.8E-38 T 11-10-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 syc0652_d 1ff3c575555d4d3cbf08d583a7702ca4 119 SUPERFAMILY SSF51182 4 115 9.13E-31 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily syc1894_d 2901fbe82b911ebd0cdf11e99ffccbe2 368 Gene3D G3DSA:1.20.58.410 5 100 1.1E-5 T 11-10-2018 syc1894_d 2901fbe82b911ebd0cdf11e99ffccbe2 368 Pfam PF00472 RF-1 domain 215 325 3.5E-38 T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 syc1894_d 2901fbe82b911ebd0cdf11e99ffccbe2 368 SMART SM00937 68 183 2.3E-66 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 syc1894_d 2901fbe82b911ebd0cdf11e99ffccbe2 368 Gene3D G3DSA:3.30.160.20 215 301 3.8E-92 T 11-10-2018 syc1894_d 2901fbe82b911ebd0cdf11e99ffccbe2 368 Gene3D G3DSA:3.30.70.1660 116 345 3.8E-92 T 11-10-2018 syc1894_d 2901fbe82b911ebd0cdf11e99ffccbe2 368 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 232 248 - T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 syc1894_d 2901fbe82b911ebd0cdf11e99ffccbe2 368 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 6 360 37.455 T 11-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 syc1894_d 2901fbe82b911ebd0cdf11e99ffccbe2 368 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 2 360 7.2E-159 T 11-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 syc1894_d 2901fbe82b911ebd0cdf11e99ffccbe2 368 Pfam PF03462 PCRF domain 14 208 9.9E-72 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 syc1894_d 2901fbe82b911ebd0cdf11e99ffccbe2 368 SUPERFAMILY SSF75620 13 356 2.22E-124 T 11-10-2018 syc0075_d 1c7cb0ce019444b2a56f8494f90b1415 168 SMART SM00393 86 165 1.9E-16 T 11-10-2018 IPR001374 R3H domain GO:0003676 syc0075_d 1c7cb0ce019444b2a56f8494f90b1415 168 Pfam PF01424 R3H domain 105 164 1.1E-10 T 11-10-2018 IPR001374 R3H domain GO:0003676 syc0075_d 1c7cb0ce019444b2a56f8494f90b1415 168 Gene3D G3DSA:3.30.300.20 6 100 1.0E-10 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta syc0075_d 1c7cb0ce019444b2a56f8494f90b1415 168 Gene3D G3DSA:3.30.1370.50 101 168 6.8E-15 T 11-10-2018 IPR036867 R3H domain superfamily GO:0003676 syc0075_d 1c7cb0ce019444b2a56f8494f90b1415 168 SUPERFAMILY SSF82708 108 164 1.77E-6 T 11-10-2018 IPR036867 R3H domain superfamily GO:0003676 syc0704_d 434e106eec9c640e4f9a4e51067f7a5b 338 Pfam PF02769 AIR synthase related protein, C-terminal domain 197 306 1.1E-9 T 11-10-2018 IPR010918 PurM-like, C-terminal domain syc0704_d 434e106eec9c640e4f9a4e51067f7a5b 338 Pfam PF00586 AIR synthase related protein, N-terminal domain 52 157 8.1E-17 T 11-10-2018 IPR016188 PurM-like, N-terminal domain syc0704_d 434e106eec9c640e4f9a4e51067f7a5b 338 SUPERFAMILY SSF55326 44 159 4.45E-23 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily syc0704_d 434e106eec9c640e4f9a4e51067f7a5b 338 Gene3D G3DSA:3.30.1330.10 10 160 5.1E-23 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily syc0704_d 434e106eec9c640e4f9a4e51067f7a5b 338 SUPERFAMILY SSF56042 167 322 1.14E-22 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily syc0704_d 434e106eec9c640e4f9a4e51067f7a5b 338 PIRSF PIRSF036540 8 331 3.6E-84 T 11-10-2018 IPR011413 Uncharacterised conserved protein UCP036540 syc0704_d 434e106eec9c640e4f9a4e51067f7a5b 338 TIGRFAM TIGR04049 AIR_rel_sll0787: AIR synthase-related protein, sll0787 family 11 328 1.2E-139 T 11-10-2018 IPR024030 AIR synthase-related protein, sll0787 family syc0704_d 434e106eec9c640e4f9a4e51067f7a5b 338 Gene3D G3DSA:3.90.650.10 161 322 1.5E-17 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily syc1087_c 8feb1487f865d2d21a0b8db53d7c859e 636 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 11-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 syc1087_c 8feb1487f865d2d21a0b8db53d7c859e 636 Gene3D G3DSA:3.40.50.970 318 491 3.3E-66 T 11-10-2018 syc1087_c 8feb1487f865d2d21a0b8db53d7c859e 636 SMART SM00861 319 483 2.0E-66 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain syc1087_c 8feb1487f865d2d21a0b8db53d7c859e 636 SUPERFAMILY SSF52922 493 625 1.7E-35 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 syc1087_c 8feb1487f865d2d21a0b8db53d7c859e 636 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 3 624 1.6E-283 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 syc1087_c 8feb1487f865d2d21a0b8db53d7c859e 636 ProSitePatterns PS00801 Transketolase signature 1. 28 47 - T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 syc1087_c 8feb1487f865d2d21a0b8db53d7c859e 636 SUPERFAMILY SSF52518 2 350 2.04E-76 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold syc1087_c 8feb1487f865d2d21a0b8db53d7c859e 636 Gene3D G3DSA:3.40.50.920 496 626 1.1E-36 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 syc1087_c 8feb1487f865d2d21a0b8db53d7c859e 636 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 2 626 43.964 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 syc1087_c 8feb1487f865d2d21a0b8db53d7c859e 636 SUPERFAMILY SSF52518 290 479 1.55E-63 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold syc1087_c 8feb1487f865d2d21a0b8db53d7c859e 636 Pfam PF02779 Transketolase, pyrimidine binding domain 320 479 6.6E-42 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain syc1087_c 8feb1487f865d2d21a0b8db53d7c859e 636 Pfam PF02780 Transketolase, C-terminal domain 496 616 3.1E-36 T 11-10-2018 IPR033248 Transketolase, C-terminal domain syc1087_c 8feb1487f865d2d21a0b8db53d7c859e 636 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 3 281 1.4E-106 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 syc1329_d bae94011a38f73270408eb2728325199 457 Gene3D G3DSA:3.40.50.300 1 117 3.8E-8 T 11-10-2018 syc1329_d bae94011a38f73270408eb2728325199 457 SMART SM00382 24 456 5.4E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain syc1329_d bae94011a38f73270408eb2728325199 457 Pfam PF13175 AAA ATPase domain 1 442 9.6E-19 T 11-10-2018 syc1329_d bae94011a38f73270408eb2728325199 457 SUPERFAMILY SSF52540 1 453 4.12E-20 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc1329_d bae94011a38f73270408eb2728325199 457 Gene3D G3DSA:3.40.50.300 211 452 6.3E-11 T 11-10-2018 syc2101_d 29b18705125a31825e28156522ad9e8a 211 SUPERFAMILY SSF141734 10 113 2.35E-48 T 11-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 syc2101_d 29b18705125a31825e28156522ad9e8a 211 Gene3D G3DSA:3.10.20.400 6 100 1.5E-39 T 11-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 syc2101_d 29b18705125a31825e28156522ad9e8a 211 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 58 109 5.0E-25 T 11-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 syc2101_d 29b18705125a31825e28156522ad9e8a 211 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 123 206 1.1E-29 T 11-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 syc2101_d 29b18705125a31825e28156522ad9e8a 211 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 35 109 8.6E-36 T 11-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 syc2101_d 29b18705125a31825e28156522ad9e8a 211 Gene3D G3DSA:1.10.287.1080 120 211 1.2E-29 T 11-10-2018 syc2101_d 29b18705125a31825e28156522ad9e8a 211 SUPERFAMILY SSF101386 121 210 7.48E-25 T 11-10-2018 syc2101_d 29b18705125a31825e28156522ad9e8a 211 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 124 209 5.3E-16 T 11-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 syc2101_d 29b18705125a31825e28156522ad9e8a 211 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 120 206 20.06 T 11-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 syc2101_d 29b18705125a31825e28156522ad9e8a 211 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 11 211 38.241 T 11-10-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 syc2101_d 29b18705125a31825e28156522ad9e8a 211 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 9 113 32.337 T 11-10-2018 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 syc0530_d 38352a8f941e944c86bb5a8bb34862bf 160 Gene3D G3DSA:2.40.50.180 33 149 1.4E-16 T 11-10-2018 syc0530_d 38352a8f941e944c86bb5a8bb34862bf 160 SUPERFAMILY SSF50341 10 157 7.19E-26 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 syc0530_d 38352a8f941e944c86bb5a8bb34862bf 160 Gene3D G3DSA:2.30.30.40 18 147 1.4E-16 T 11-10-2018 syc0530_d 38352a8f941e944c86bb5a8bb34862bf 160 Pfam PF01584 CheW-like domain 16 153 6.5E-23 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 syc0530_d 38352a8f941e944c86bb5a8bb34862bf 160 SMART SM00260 11 153 1.4E-12 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 syc2211_d becbb9db5f1af014fde4e56e86b844d2 173 Pfam PF01467 Cytidylyltransferase-like 26 148 3.1E-12 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 syc2211_d becbb9db5f1af014fde4e56e86b844d2 173 Gene3D G3DSA:3.40.50.620 4 163 4.9E-33 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold syc2211_d becbb9db5f1af014fde4e56e86b844d2 173 SUPERFAMILY SSF52374 23 157 2.36E-20 T 11-10-2018 syc2211_d becbb9db5f1af014fde4e56e86b844d2 173 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 25 94 3.9E-13 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 syc2264_d 9525b7db62a2abf65d718acf683cd2b0 107 SUPERFAMILY SSF52833 6 107 3.34E-42 T 11-10-2018 IPR036249 Thioredoxin-like superfamily syc2264_d 9525b7db62a2abf65d718acf683cd2b0 107 ProSitePatterns PS00194 Thioredoxin family active site. 24 42 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 syc2264_d 9525b7db62a2abf65d718acf683cd2b0 107 Pfam PF00085 Thioredoxin 6 106 2.2E-38 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 syc2264_d 9525b7db62a2abf65d718acf683cd2b0 107 TIGRFAM TIGR01068 thioredoxin: thioredoxin 8 106 7.6E-43 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 syc2264_d 9525b7db62a2abf65d718acf683cd2b0 107 Gene3D G3DSA:3.40.30.10 4 107 6.5E-40 T 11-10-2018 syc2264_d 9525b7db62a2abf65d718acf683cd2b0 107 PIRSF PIRSF000077 1 107 3.8E-48 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 syc2264_d 9525b7db62a2abf65d718acf683cd2b0 107 PRINTS PR00421 Thioredoxin family signature 31 40 2.1E-10 T 11-10-2018 syc2264_d 9525b7db62a2abf65d718acf683cd2b0 107 PRINTS PR00421 Thioredoxin family signature 71 82 2.1E-10 T 11-10-2018 syc2264_d 9525b7db62a2abf65d718acf683cd2b0 107 PRINTS PR00421 Thioredoxin family signature 23 31 2.1E-10 T 11-10-2018 syc2434_c 5a50b44c309c6b13cea3e3128493e6da 546 SMART SM00729 227 439 8.8E-20 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 syc2434_c 5a50b44c309c6b13cea3e3128493e6da 546 Pfam PF04055 Radical SAM superfamily 231 393 2.4E-12 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 syc2434_c 5a50b44c309c6b13cea3e3128493e6da 546 Gene3D G3DSA:3.80.30.20 226 445 1.3E-17 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe syc2434_c 5a50b44c309c6b13cea3e3128493e6da 546 SUPERFAMILY SSF102114 226 538 5.62E-33 T 11-10-2018 syc0648_d f1a9c19e764c8aa6113b6476934a2adb 336 Gene3D G3DSA:3.20.20.70 6 303 2.6E-41 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 syc0648_d f1a9c19e764c8aa6113b6476934a2adb 336 SUPERFAMILY SSF102114 22 302 2.75E-41 T 11-10-2018 syc0648_d f1a9c19e764c8aa6113b6476934a2adb 336 TIGRFAM TIGR03550 F420_cofG: 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofG subunit 20 313 1.0E-75 T 11-10-2018 IPR019939 CofG family GO:0009108|GO:0016765|GO:0051539 KEGG: 00680+2.5.1.77 syc0648_d f1a9c19e764c8aa6113b6476934a2adb 336 Pfam PF04055 Radical SAM superfamily 27 190 7.0E-12 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 syc0648_d f1a9c19e764c8aa6113b6476934a2adb 336 Hamap MF_01611 FO synthase subunit 1 [cofG]. 18 324 47.727 T 11-10-2018 IPR019939 CofG family GO:0009108|GO:0016765|GO:0051539 KEGG: 00680+2.5.1.77 syc0648_d f1a9c19e764c8aa6113b6476934a2adb 336 SMART SM00729 22 236 1.3E-11 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 syc1853_d 7f517eee346eeb9ef35fa590772500a4 62 TIGRFAM TIGR03043 PS_II_psbZ: photosystem II core protein PsbZ 4 61 1.2E-24 T 11-10-2018 IPR002644 Photosystem II PsbZ, reaction centre GO:0009523|GO:0009539|GO:0015979|GO:0042549 syc1853_d 7f517eee346eeb9ef35fa590772500a4 62 Pfam PF01737 YCF9 4 61 3.6E-23 T 11-10-2018 IPR002644 Photosystem II PsbZ, reaction centre GO:0009523|GO:0009539|GO:0015979|GO:0042549 syc1853_d 7f517eee346eeb9ef35fa590772500a4 62 Hamap MF_00644 Photosystem II reaction center protein Z [psbZ]. 1 62 14.522 T 11-10-2018 IPR002644 Photosystem II PsbZ, reaction centre GO:0009523|GO:0009539|GO:0015979|GO:0042549 syc1853_d 7f517eee346eeb9ef35fa590772500a4 62 SUPERFAMILY SSF161055 1 62 4.45E-18 T 11-10-2018 IPR036512 Photosystem II PsbZ superfamily GO:0009523|GO:0009539|GO:0015979|GO:0042549 syc1853_d 7f517eee346eeb9ef35fa590772500a4 62 ProDom PD004770 PHOTOSYSTEM II CENTER REACTION PHOTOSYNTHESIS TRANSMEMBRANE THYLAKOID CHLOROPLAST Z PLASTID 22 49 3.0E-9 T 11-10-2018 IPR002644 Photosystem II PsbZ, reaction centre GO:0009523|GO:0009539|GO:0015979|GO:0042549 syc1853_d 7f517eee346eeb9ef35fa590772500a4 62 Gene3D G3DSA:1.10.287.740 1 62 6.9E-21 T 11-10-2018 IPR036512 Photosystem II PsbZ superfamily GO:0009523|GO:0009539|GO:0015979|GO:0042549 syc0291_c 4c223ea231830389981b81c1493f0999 275 Gene3D G3DSA:3.30.2010.10 70 154 1.8E-9 T 11-10-2018 syc0291_c 4c223ea231830389981b81c1493f0999 275 Pfam PF01435 Peptidase family M48 79 246 3.2E-31 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 syc1877_d fe21e641202308d475c3ad6f5adbb5a2 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 178 42.158 T 11-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc1877_d fe21e641202308d475c3ad6f5adbb5a2 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 56 72 - T 11-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc1877_d fe21e641202308d475c3ad6f5adbb5a2 179 SUPERFAMILY SSF55282 3 177 1.55E-71 T 11-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc1877_d fe21e641202308d475c3ad6f5adbb5a2 179 Pfam PF00281 Ribosomal protein L5 23 79 2.5E-23 T 11-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc1877_d fe21e641202308d475c3ad6f5adbb5a2 179 Gene3D G3DSA:3.30.1440.10 1 178 1.7E-75 T 11-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc1877_d fe21e641202308d475c3ad6f5adbb5a2 179 PIRSF PIRSF002161 1 179 2.0E-59 T 11-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc1877_d fe21e641202308d475c3ad6f5adbb5a2 179 Pfam PF00673 ribosomal L5P family C-terminus 83 176 1.2E-37 T 11-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc1522_d bb9059806705a670893f904eab583ec0 506 Gene3D G3DSA:3.40.1670.10 334 451 1.3E-41 T 11-10-2018 syc1522_d bb9059806705a670893f904eab583ec0 506 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 9 428 9.1E-149 T 11-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 syc1522_d bb9059806705a670893f904eab583ec0 506 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 5 452 1.3E-172 T 11-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 syc1522_d bb9059806705a670893f904eab583ec0 506 SUPERFAMILY SSF50475 3 319 1.8E-111 T 11-10-2018 syc1522_d bb9059806705a670893f904eab583ec0 506 SUPERFAMILY SSF143968 320 484 6.15E-58 T 11-10-2018 syc0467_c dbd546c014a85f474566d4d6cb8fa2f8 926 Pfam PF00690 Cation transporter/ATPase, N-terminus 20 87 4.2E-18 T 11-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 syc0467_c dbd546c014a85f474566d4d6cb8fa2f8 926 Pfam PF13246 Cation transport ATPase (P-type) 405 500 7.7E-21 T 11-10-2018 syc0467_c dbd546c014a85f474566d4d6cb8fa2f8 926 Gene3D G3DSA:1.20.1110.10 70 920 0.0 T 11-10-2018 syc0467_c dbd546c014a85f474566d4d6cb8fa2f8 926 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 659 675 2.1E-17 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 syc0467_c dbd546c014a85f474566d4d6cb8fa2f8 926 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 691 716 2.1E-17 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 syc0467_c dbd546c014a85f474566d4d6cb8fa2f8 926 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 631 647 2.1E-17 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 syc0467_c dbd546c014a85f474566d4d6cb8fa2f8 926 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 518 536 2.1E-17 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 syc0467_c dbd546c014a85f474566d4d6cb8fa2f8 926 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 236 365 3.7E-27 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 syc0467_c dbd546c014a85f474566d4d6cb8fa2f8 926 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 628 735 1.0E-34 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 syc0467_c dbd546c014a85f474566d4d6cb8fa2f8 926 SUPERFAMILY SSF81653 135 244 4.45E-28 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 syc0467_c dbd546c014a85f474566d4d6cb8fa2f8 926 SMART SM00831 19 92 1.8E-24 T 11-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 syc0467_c dbd546c014a85f474566d4d6cb8fa2f8 926 SUPERFAMILY SSF56784 343 765 3.52E-65 T 11-10-2018 IPR036412 HAD-like superfamily syc0467_c dbd546c014a85f474566d4d6cb8fa2f8 926 Pfam PF00702 haloacid dehalogenase-like hydrolase 557 673 3.3E-20 T 11-10-2018 syc0467_c dbd546c014a85f474566d4d6cb8fa2f8 926 Pfam PF00689 Cation transporting ATPase, C-terminus 745 921 2.6E-47 T 11-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 syc0467_c dbd546c014a85f474566d4d6cb8fa2f8 926 Gene3D G3DSA:2.70.150.10 36 248 0.0 T 11-10-2018 syc0467_c dbd546c014a85f474566d4d6cb8fa2f8 926 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 345 359 1.1E-36 T 11-10-2018 syc0467_c dbd546c014a85f474566d4d6cb8fa2f8 926 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 683 695 1.1E-36 T 11-10-2018 syc0467_c dbd546c014a85f474566d4d6cb8fa2f8 926 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 557 568 1.1E-36 T 11-10-2018 syc0467_c dbd546c014a85f474566d4d6cb8fa2f8 926 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 182 196 1.1E-36 T 11-10-2018 syc0467_c dbd546c014a85f474566d4d6cb8fa2f8 926 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 659 678 1.1E-36 T 11-10-2018 syc0467_c dbd546c014a85f474566d4d6cb8fa2f8 926 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 579 589 1.1E-36 T 11-10-2018 syc0467_c dbd546c014a85f474566d4d6cb8fa2f8 926 Gene3D G3DSA:3.40.1110.10 355 564 0.0 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 syc0467_c dbd546c014a85f474566d4d6cb8fa2f8 926 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 347 353 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 syc0467_c dbd546c014a85f474566d4d6cb8fa2f8 926 SUPERFAMILY SSF81665 19 925 1.7E-121 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 syc0467_c dbd546c014a85f474566d4d6cb8fa2f8 926 Gene3D G3DSA:3.40.50.1000 342 704 0.0 T 11-10-2018 IPR023214 HAD superfamily syc0467_c dbd546c014a85f474566d4d6cb8fa2f8 926 SUPERFAMILY SSF81660 352 560 1.74E-56 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 syc0467_c dbd546c014a85f474566d4d6cb8fa2f8 926 Pfam PF00122 E1-E2 ATPase 132 324 6.1E-52 T 11-10-2018 syc0684_c 81365847dfdefec2c7a1b98b3d01f93e 120 Gene3D G3DSA:3.40.50.12740 2 119 6.8E-41 T 11-10-2018 syc0684_c 81365847dfdefec2c7a1b98b3d01f93e 120 Pfam PF00072 Response regulator receiver domain 4 116 1.0E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 syc0684_c 81365847dfdefec2c7a1b98b3d01f93e 120 SMART SM00448 2 115 2.2E-39 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 syc0684_c 81365847dfdefec2c7a1b98b3d01f93e 120 SUPERFAMILY SSF52172 2 118 1.85E-37 T 11-10-2018 IPR011006 CheY-like superfamily syc0819_c 813958b8907557062cedf480c5068c3a 1097 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 335 1.1E-71 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 syc0819_c 813958b8907557062cedf480c5068c3a 1097 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 696 898 1.3E-37 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 syc0819_c 813958b8907557062cedf480c5068c3a 1097 Gene3D G3DSA:3.30.470.20 688 959 2.5E-115 T 11-10-2018 syc0819_c 813958b8907557062cedf480c5068c3a 1097 SMART SM01096 423 546 3.3E-69 T 11-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 syc0819_c 813958b8907557062cedf480c5068c3a 1097 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1077 0.0 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 syc0819_c 813958b8907557062cedf480c5068c3a 1097 Gene3D G3DSA:3.30.470.20 120 403 4.7E-124 T 11-10-2018 syc0819_c 813958b8907557062cedf480c5068c3a 1097 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 862 869 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 syc0819_c 813958b8907557062cedf480c5068c3a 1097 Pfam PF02142 MGS-like domain 982 1065 6.2E-19 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain syc0819_c 813958b8907557062cedf480c5068c3a 1097 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1086 13.079 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 syc0819_c 813958b8907557062cedf480c5068c3a 1097 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 426 546 1.3E-39 T 11-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 syc0819_c 813958b8907557062cedf480c5068c3a 1097 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 298 305 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 syc0819_c 813958b8907557062cedf480c5068c3a 1097 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 165 179 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 syc0819_c 813958b8907557062cedf480c5068c3a 1097 SUPERFAMILY SSF56059 696 957 1.77E-104 T 11-10-2018 syc0819_c 813958b8907557062cedf480c5068c3a 1097 Gene3D G3DSA:3.40.50.20 1 116 1.4E-50 T 11-10-2018 syc0819_c 813958b8907557062cedf480c5068c3a 1097 Gene3D G3DSA:3.40.50.20 567 673 8.4E-46 T 11-10-2018 syc0819_c 813958b8907557062cedf480c5068c3a 1097 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1093 13.712 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 syc0819_c 813958b8907557062cedf480c5068c3a 1097 SUPERFAMILY SSF52335 961 1095 2.75E-39 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily syc0819_c 813958b8907557062cedf480c5068c3a 1097 SUPERFAMILY SSF52440 1 127 9.64E-50 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily syc0819_c 813958b8907557062cedf480c5068c3a 1097 SUPERFAMILY SSF52440 571 698 2.59E-46 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily syc0819_c 813958b8907557062cedf480c5068c3a 1097 Gene3D G3DSA:3.40.50.1380 960 1096 2.4E-41 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily syc0819_c 813958b8907557062cedf480c5068c3a 1097 SUPERFAMILY SSF56059 128 401 3.18E-105 T 11-10-2018 syc0819_c 813958b8907557062cedf480c5068c3a 1097 SMART SM00851 979 1065 2.3E-31 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain syc0819_c 813958b8907557062cedf480c5068c3a 1097 Gene3D G3DSA:1.10.1030.10 410 550 5.5E-45 T 11-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 syc0819_c 813958b8907557062cedf480c5068c3a 1097 SUPERFAMILY SSF48108 396 549 3.01E-51 T 11-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 syc0819_c 813958b8907557062cedf480c5068c3a 1097 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 240 257 1.5E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 syc0819_c 813958b8907557062cedf480c5068c3a 1097 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 1.5E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 syc0819_c 813958b8907557062cedf480c5068c3a 1097 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 169 181 1.5E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 syc0819_c 813958b8907557062cedf480c5068c3a 1097 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 1.5E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 syc0819_c 813958b8907557062cedf480c5068c3a 1097 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 205 224 1.5E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 syc0819_c 813958b8907557062cedf480c5068c3a 1097 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 298 327 1.5E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 syc0819_c 813958b8907557062cedf480c5068c3a 1097 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 1.5E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 syc1981_c a58f0c21efc6b1db7cf2eb5c456d6266 302 Pfam PF00480 ROK family 8 293 1.3E-60 T 11-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 syc1981_c a58f0c21efc6b1db7cf2eb5c456d6266 302 SUPERFAMILY SSF53067 6 295 2.14E-62 T 11-10-2018 syc1981_c a58f0c21efc6b1db7cf2eb5c456d6266 302 Gene3D G3DSA:3.30.420.40 8 289 1.1E-81 T 11-10-2018 syc1981_c a58f0c21efc6b1db7cf2eb5c456d6266 302 Gene3D G3DSA:3.30.420.40 128 276 1.1E-81 T 11-10-2018 syc2508_d 269bc836404e8215ee73890d3996b9ba 624 Gene3D G3DSA:1.10.40.90 380 422 1.1E-18 T 11-10-2018 syc2508_d 269bc836404e8215ee73890d3996b9ba 624 SUPERFAMILY SSF64484 7 623 2.06E-234 T 11-10-2018 syc2508_d 269bc836404e8215ee73890d3996b9ba 624 SMART SM00663 241 520 1.9E-183 T 11-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 syc2508_d 269bc836404e8215ee73890d3996b9ba 624 TIGRFAM TIGR02387 rpoC1_cyan: DNA-directed RNA polymerase, gamma subunit 7 623 0.0 T 11-10-2018 IPR012755 DNA-directed RNA polymerase, subunit gamma GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 syc2508_d 269bc836404e8215ee73890d3996b9ba 624 Pfam PF00623 RNA polymerase Rpb1, domain 2 350 491 6.2E-37 T 11-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 syc2508_d 269bc836404e8215ee73890d3996b9ba 624 Pfam PF04983 RNA polymerase Rpb1, domain 3 495 617 1.2E-12 T 11-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 syc2508_d 269bc836404e8215ee73890d3996b9ba 624 Pfam PF04997 RNA polymerase Rpb1, domain 1 6 348 7.8E-80 T 11-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 syc2508_d 269bc836404e8215ee73890d3996b9ba 624 Gene3D G3DSA:1.10.274.100 495 624 7.1E-32 T 11-10-2018 syc2508_d 269bc836404e8215ee73890d3996b9ba 624 Hamap MF_01323 DNA-directed RNA polymerase subunit gamma [rpoC1]. 1 624 25.947 T 11-10-2018 IPR034678 DNA-directed RNA polymerase subunit RpoC1 GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 syc1142_c c2cb67d85eb563df8a4f939b6aa93280 299 SUPERFAMILY SSF52317 18 295 1.13E-91 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like syc1142_c c2cb67d85eb563df8a4f939b6aa93280 299 Gene3D G3DSA:3.40.50.880 1 298 1.6E-119 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like syc1142_c c2cb67d85eb563df8a4f939b6aa93280 299 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 295 2.3E-114 T 11-10-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 syc1142_c c2cb67d85eb563df8a4f939b6aa93280 299 Hamap MF_00295 Homoserine O-succinyltransferase [metAS]. 31 299 40.062 T 11-10-2018 IPR033752 MetA family syc1142_c c2cb67d85eb563df8a4f939b6aa93280 299 Pfam PF04204 Homoserine O-succinyltransferase 2 296 1.4E-127 T 11-10-2018 IPR033752 MetA family syc1142_c c2cb67d85eb563df8a4f939b6aa93280 299 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 1.0E-147 T 11-10-2018 syc1142_c c2cb67d85eb563df8a4f939b6aa93280 299 PIRSF PIRSF000450 1 298 1.8E-127 T 11-10-2018 IPR033752 MetA family syc0540_c 7fd73402b2179d29c941efab2eb15c58 209 Gene3D G3DSA:1.10.150.240 19 92 1.5E-55 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 syc0540_c 7fd73402b2179d29c941efab2eb15c58 209 Pfam PF13419 Haloacid dehalogenase-like hydrolase 97 198 9.1E-10 T 11-10-2018 syc0540_c 7fd73402b2179d29c941efab2eb15c58 209 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 140 198 8.6E-13 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 syc0540_c 7fd73402b2179d29c941efab2eb15c58 209 Gene3D G3DSA:3.40.50.1000 9 195 1.5E-55 T 11-10-2018 IPR023214 HAD superfamily syc0540_c 7fd73402b2179d29c941efab2eb15c58 209 SUPERFAMILY SSF56784 8 205 1.19E-34 T 11-10-2018 IPR036412 HAD-like superfamily syc0540_c 7fd73402b2179d29c941efab2eb15c58 209 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 7 18 3.1E-5 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 syc0540_c 7fd73402b2179d29c941efab2eb15c58 209 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 187 200 3.1E-5 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 syc0540_c 7fd73402b2179d29c941efab2eb15c58 209 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 160 180 3.1E-5 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 syc2053_c b33d9a2d8109b510d81498e3b224b940 406 Pfam PF03023 MviN-like protein 36 384 1.0E-87 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ syc2053_c b33d9a2d8109b510d81498e3b224b940 406 PRINTS PR01806 Virulence factor MviN signature 142 166 8.9E-11 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ syc2053_c b33d9a2d8109b510d81498e3b224b940 406 PRINTS PR01806 Virulence factor MviN signature 278 304 8.9E-11 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ syc2053_c b33d9a2d8109b510d81498e3b224b940 406 PRINTS PR01806 Virulence factor MviN signature 166 187 8.9E-11 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ syc2053_c b33d9a2d8109b510d81498e3b224b940 406 PRINTS PR01806 Virulence factor MviN signature 41 60 8.9E-11 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ syc2053_c b33d9a2d8109b510d81498e3b224b940 406 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 11 384 3.5E-99 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ syc2155_c 864418c534de5c74de5fd358c1e1a6bc 341 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 9 109 5.6E-32 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc2155_c 864418c534de5c74de5fd358c1e1a6bc 341 SUPERFAMILY SSF55347 158 320 2.41E-63 T 11-10-2018 syc2155_c 864418c534de5c74de5fd358c1e1a6bc 341 Gene3D G3DSA:3.40.50.720 10 333 6.3E-127 T 11-10-2018 syc2155_c 864418c534de5c74de5fd358c1e1a6bc 341 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 10 330 1.2E-116 T 11-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc2155_c 864418c534de5c74de5fd358c1e1a6bc 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 116 129 4.1E-31 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc2155_c 864418c534de5c74de5fd358c1e1a6bc 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 275 290 4.1E-31 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc2155_c 864418c534de5c74de5fd358c1e1a6bc 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 179 195 4.1E-31 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc2155_c 864418c534de5c74de5fd358c1e1a6bc 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 152 170 4.1E-31 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc2155_c 864418c534de5c74de5fd358c1e1a6bc 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 235 252 4.1E-31 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc2155_c 864418c534de5c74de5fd358c1e1a6bc 341 SUPERFAMILY SSF51735 9 188 4.61E-51 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily syc2155_c 864418c534de5c74de5fd358c1e1a6bc 341 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 163 319 2.3E-57 T 11-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc2155_c 864418c534de5c74de5fd358c1e1a6bc 341 PIRSF PIRSF000149 7 341 4.6E-117 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc2155_c 864418c534de5c74de5fd358c1e1a6bc 341 Gene3D G3DSA:3.30.360.10 157 321 6.3E-127 T 11-10-2018 syc2155_c 864418c534de5c74de5fd358c1e1a6bc 341 SMART SM00846 9 158 1.3E-68 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc2155_c 864418c534de5c74de5fd358c1e1a6bc 341 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 156 163 - T 11-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc1233_d a7cf706b563bbcf912cc5c0c1bbae83c 421 PIRSF PIRSF006728 5 421 4.5E-151 T 11-10-2018 IPR008135 Competence-induced protein CinA syc1233_d a7cf706b563bbcf912cc5c0c1bbae83c 421 SUPERFAMILY SSF53218 6 208 1.24E-39 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily syc1233_d a7cf706b563bbcf912cc5c0c1bbae83c 421 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 268 417 4.2E-49 T 11-10-2018 IPR008136 CinA, C-terminal syc1233_d a7cf706b563bbcf912cc5c0c1bbae83c 421 Gene3D G3DSA:3.90.950.20 253 418 2.2E-54 T 11-10-2018 IPR036653 CinA-like, C-terminal syc1233_d a7cf706b563bbcf912cc5c0c1bbae83c 421 SMART SM00852 9 177 2.1E-42 T 11-10-2018 IPR001453 MoaB/Mog domain syc1233_d a7cf706b563bbcf912cc5c0c1bbae83c 421 Pfam PF00994 Probable molybdopterin binding domain 9 175 3.7E-34 T 11-10-2018 IPR001453 MoaB/Mog domain syc1233_d a7cf706b563bbcf912cc5c0c1bbae83c 421 SUPERFAMILY SSF142433 256 419 2.62E-54 T 11-10-2018 IPR036653 CinA-like, C-terminal syc1233_d a7cf706b563bbcf912cc5c0c1bbae83c 421 Pfam PF02464 Competence-damaged protein 262 416 2.6E-53 T 11-10-2018 IPR008136 CinA, C-terminal syc1233_d a7cf706b563bbcf912cc5c0c1bbae83c 421 Gene3D G3DSA:3.40.980.10 7 176 3.2E-46 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily syc1233_d a7cf706b563bbcf912cc5c0c1bbae83c 421 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 8 417 1.3E-151 T 11-10-2018 IPR008135 Competence-induced protein CinA syc1233_d a7cf706b563bbcf912cc5c0c1bbae83c 421 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 421 175.864 T 11-10-2018 IPR008135 Competence-induced protein CinA syc0533_d f63b8ab60268a46df86e3c398bfd99ea 257 Pfam PF00072 Response regulator receiver domain 26 143 1.2E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 syc0533_d f63b8ab60268a46df86e3c398bfd99ea 257 Pfam PF00486 Transcriptional regulatory protein, C terminal 181 256 4.2E-29 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 syc0533_d f63b8ab60268a46df86e3c398bfd99ea 257 SUPERFAMILY SSF46894 157 256 1.16E-31 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 syc0533_d f63b8ab60268a46df86e3c398bfd99ea 257 Gene3D G3DSA:1.10.10.10 153 257 5.8E-36 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily syc0533_d f63b8ab60268a46df86e3c398bfd99ea 257 SMART SM00862 180 256 2.6E-30 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 syc0533_d f63b8ab60268a46df86e3c398bfd99ea 257 Gene3D G3DSA:3.40.50.2300 12 152 4.9E-38 T 11-10-2018 syc0533_d f63b8ab60268a46df86e3c398bfd99ea 257 SUPERFAMILY SSF52172 21 158 1.57E-40 T 11-10-2018 IPR011006 CheY-like superfamily syc0533_d f63b8ab60268a46df86e3c398bfd99ea 257 SMART SM00448 24 144 1.6E-45 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 syc1625_c 1cdba36a535e6b19fae605b891f1c728 183 Gene3D G3DSA:3.30.700.10 26 160 6.4E-10 T 11-10-2018 syc1625_c 1cdba36a535e6b19fae605b891f1c728 183 Pfam PF07963 Prokaryotic N-terminal methylation motif 22 45 1.4E-4 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site syc1625_c 1cdba36a535e6b19fae605b891f1c728 183 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 24 45 4.3E-6 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site syc1625_c 1cdba36a535e6b19fae605b891f1c728 183 SUPERFAMILY SSF54523 26 140 2.28E-12 T 11-10-2018 syc1045_c fef12cca94856b0e397c07874d1c0633 368 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 6 342 2.1E-96 T 11-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 syc1045_c fef12cca94856b0e397c07874d1c0633 368 Gene3D G3DSA:3.20.20.70 1 367 6.6E-149 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 syc1045_c fef12cca94856b0e397c07874d1c0633 368 SUPERFAMILY SSF51395 6 364 7.07E-131 T 11-10-2018 syc1626_d cfef2af6c391c4ae779708ef5b50fb1a 124 ProDom PD012692 PHOTOSYSTEM II REACTION W CENTER PSB28 CHLOROPLAST PHOTOSYNTHESIS PLASTID CENTRE 7 114 1.0E-56 T 11-10-2018 IPR005610 Photosystem II Psb28, class 1 GO:0009523|GO:0009654|GO:0015979|GO:0016020 syc1626_d cfef2af6c391c4ae779708ef5b50fb1a 124 TIGRFAM TIGR03047 PS_II_psb28: photosystem II reaction center protein Psb28 8 120 4.4E-36 T 11-10-2018 IPR005610 Photosystem II Psb28, class 1 GO:0009523|GO:0009654|GO:0015979|GO:0016020 syc1626_d cfef2af6c391c4ae779708ef5b50fb1a 124 Gene3D G3DSA:2.40.30.220 5 124 1.2E-25 T 11-10-2018 IPR038676 Photosystem II Psb28, class 1 superfamily syc1626_d cfef2af6c391c4ae779708ef5b50fb1a 124 Pfam PF03912 Psb28 protein 8 119 3.1E-30 T 11-10-2018 IPR005610 Photosystem II Psb28, class 1 GO:0009523|GO:0009654|GO:0015979|GO:0016020 syc0943_d dc188b9aa55448909b04a9edeffeb6b4 605 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 22 585 2.1E-180 T 11-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 syc0943_d dc188b9aa55448909b04a9edeffeb6b4 605 SUPERFAMILY SSF56601 252 586 9.39E-92 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like syc0943_d dc188b9aa55448909b04a9edeffeb6b4 605 Gene3D G3DSA:3.40.710.10 251 591 1.6E-93 T 11-10-2018 syc0943_d dc188b9aa55448909b04a9edeffeb6b4 605 Pfam PF03717 Penicillin-binding Protein dimerisation domain 67 235 4.3E-48 T 11-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 syc0943_d dc188b9aa55448909b04a9edeffeb6b4 605 Pfam PF00905 Penicillin binding protein transpeptidase domain 269 581 5.5E-63 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 syc0943_d dc188b9aa55448909b04a9edeffeb6b4 605 Gene3D G3DSA:3.30.1390.30 86 162 2.5E-50 T 11-10-2018 syc0943_d dc188b9aa55448909b04a9edeffeb6b4 605 Gene3D G3DSA:3.90.1310.10 67 247 2.5E-50 T 11-10-2018 syc0943_d dc188b9aa55448909b04a9edeffeb6b4 605 SUPERFAMILY SSF56519 57 251 2.22E-51 T 11-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 syc1875_d 66138819ed9cb1ffac8de1e054f5f315 121 Gene3D G3DSA:2.40.150.20 1 121 4.9E-53 T 11-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 syc1875_d 66138819ed9cb1ffac8de1e054f5f315 121 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 121 4.7E-56 T 11-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 syc1875_d 66138819ed9cb1ffac8de1e054f5f315 121 Pfam PF00238 Ribosomal protein L14p/L23e 1 121 9.3E-54 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 syc1875_d 66138819ed9cb1ffac8de1e054f5f315 121 ProSitePatterns PS00049 Ribosomal protein L14 signature. 59 85 - T 11-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc1875_d 66138819ed9cb1ffac8de1e054f5f315 121 SUPERFAMILY SSF50193 1 121 1.44E-52 T 11-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 syc1875_d 66138819ed9cb1ffac8de1e054f5f315 121 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 121 26.213 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 syc1875_d 66138819ed9cb1ffac8de1e054f5f315 121 SMART SM01374 1 121 2.2E-82 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 syc2258_d ff012f695d333d0da27201b1fd136bb4 119 Pfam PF11189 Protein of unknown function (DUF2973) 10 84 4.8E-24 T 11-10-2018 IPR021355 Bacteriophage Syn9, Gp224 syc2318_c df6c945724b750bda9925e060a103d21 57 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 3 57 5.8E-22 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc2318_c df6c945724b750bda9925e060a103d21 57 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.908 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc2318_c df6c945724b750bda9925e060a103d21 57 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 6.0E-14 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc2318_c df6c945724b750bda9925e060a103d21 57 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 6.0E-14 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc2318_c df6c945724b750bda9925e060a103d21 57 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 6.0E-14 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc2318_c df6c945724b750bda9925e060a103d21 57 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 6.0E-14 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc2318_c df6c945724b750bda9925e060a103d21 57 Pfam PF01165 Ribosomal protein S21 3 57 9.2E-23 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc2318_c df6c945724b750bda9925e060a103d21 57 Gene3D G3DSA:1.20.5.1150 16 54 8.7E-17 T 11-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc2318_c df6c945724b750bda9925e060a103d21 57 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 11-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc2318_c df6c945724b750bda9925e060a103d21 57 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 16 43 6.0E-9 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc0581_c 25086089de3d8e64852dce17845de86d 337 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 82 230 6.7E-37 T 11-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain syc0581_c 25086089de3d8e64852dce17845de86d 337 Gene3D G3DSA:1.10.260.150 52 312 4.8E-57 T 11-10-2018 syc0581_c 25086089de3d8e64852dce17845de86d 337 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 81 230 7.1E-41 T 11-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain syc0918_d 7b74bf62591c033c261878feb728b70c 226 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 22 201 9.9E-61 T 11-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 syc0918_d 7b74bf62591c033c261878feb728b70c 226 SUPERFAMILY SSF55729 19 206 1.91E-59 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase syc0918_d 7b74bf62591c033c261878feb728b70c 226 Gene3D G3DSA:3.40.630.70 47 215 2.9E-47 T 11-10-2018 syc0918_d 7b74bf62591c033c261878feb728b70c 226 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 226 59.697 T 11-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 syc0918_d 7b74bf62591c033c261878feb728b70c 226 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 21 185 1.4E-53 T 11-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 syc0228_c f09018d16b4d00af77c684859674bb36 453 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 15 446 2.8E-198 T 11-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 syc0228_c f09018d16b4d00af77c684859674bb36 453 SUPERFAMILY SSF52540 188 437 3.3E-52 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0228_c f09018d16b4d00af77c684859674bb36 453 SUPERFAMILY SSF48024 14 124 1.83E-34 T 11-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 syc0228_c f09018d16b4d00af77c684859674bb36 453 SMART SM00382 206 410 0.0017 T 11-10-2018 IPR003593 AAA+ ATPase domain syc0228_c f09018d16b4d00af77c684859674bb36 453 Gene3D G3DSA:1.10.860.10 9 169 2.2E-53 T 11-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal syc0228_c f09018d16b4d00af77c684859674bb36 453 Pfam PF00772 DnaB-like helicase N terminal domain 14 115 2.4E-33 T 11-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 syc0228_c f09018d16b4d00af77c684859674bb36 453 Gene3D G3DSA:3.40.50.300 170 448 6.7E-105 T 11-10-2018 syc0228_c f09018d16b4d00af77c684859674bb36 453 Pfam PF03796 DnaB-like helicase C terminal domain 189 444 1.3E-115 T 11-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 syc2422_c 11abbff753edad8a3f7f996b82e4a4eb 463 Pfam PF02875 Mur ligase family, glutamate ligase domain 319 385 2.2E-6 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 syc2422_c 11abbff753edad8a3f7f996b82e4a4eb 463 Gene3D G3DSA:3.40.1190.10 97 317 2.7E-52 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 syc2422_c 11abbff753edad8a3f7f996b82e4a4eb 463 Gene3D G3DSA:3.40.50.720 1 94 2.7E-12 T 11-10-2018 syc2422_c 11abbff753edad8a3f7f996b82e4a4eb 463 SUPERFAMILY SSF53244 317 460 9.16E-37 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 syc2422_c 11abbff753edad8a3f7f996b82e4a4eb 463 Pfam PF08245 Mur ligase middle domain 114 298 7.6E-26 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 syc2422_c 11abbff753edad8a3f7f996b82e4a4eb 463 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 2 460 31.057 T 11-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 syc2422_c 11abbff753edad8a3f7f996b82e4a4eb 463 SUPERFAMILY SSF53623 104 315 2.75E-47 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 syc2422_c 11abbff753edad8a3f7f996b82e4a4eb 463 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 5 458 4.3E-111 T 11-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 syc2422_c 11abbff753edad8a3f7f996b82e4a4eb 463 SUPERFAMILY SSF51984 3 89 1.7E-12 T 11-10-2018 syc2422_c 11abbff753edad8a3f7f996b82e4a4eb 463 Gene3D G3DSA:3.90.190.20 318 457 7.7E-36 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 syc1785_d ad4e9fbfde4e0fd439e5a6b931a93847 790 SUPERFAMILY SSF55008 13 87 6.28E-15 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 syc1785_d ad4e9fbfde4e0fd439e5a6b931a93847 790 Pfam PF00702 haloacid dehalogenase-like hydrolase 470 680 2.2E-41 T 11-10-2018 syc1785_d ad4e9fbfde4e0fd439e5a6b931a93847 790 Gene3D G3DSA:3.40.1110.10 485 597 8.9E-77 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 syc1785_d ad4e9fbfde4e0fd439e5a6b931a93847 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 667 686 7.0E-19 T 11-10-2018 syc1785_d ad4e9fbfde4e0fd439e5a6b931a93847 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 474 488 7.0E-19 T 11-10-2018 syc1785_d ad4e9fbfde4e0fd439e5a6b931a93847 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 590 601 7.0E-19 T 11-10-2018 syc1785_d ad4e9fbfde4e0fd439e5a6b931a93847 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 292 306 7.0E-19 T 11-10-2018 syc1785_d ad4e9fbfde4e0fd439e5a6b931a93847 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 690 702 7.0E-19 T 11-10-2018 syc1785_d ad4e9fbfde4e0fd439e5a6b931a93847 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 612 622 7.0E-19 T 11-10-2018 syc1785_d ad4e9fbfde4e0fd439e5a6b931a93847 790 SUPERFAMILY SSF81653 257 342 7.98E-20 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 syc1785_d ad4e9fbfde4e0fd439e5a6b931a93847 790 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 476 482 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 syc1785_d ad4e9fbfde4e0fd439e5a6b931a93847 790 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 418 757 1.2E-53 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 syc1785_d ad4e9fbfde4e0fd439e5a6b931a93847 790 ProSitePatterns PS01047 Heavy-metal-associated domain. 20 49 - T 11-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 syc1785_d ad4e9fbfde4e0fd439e5a6b931a93847 790 Gene3D G3DSA:2.70.150.20 219 346 1.7E-31 T 11-10-2018 syc1785_d ad4e9fbfde4e0fd439e5a6b931a93847 790 Gene3D G3DSA:3.40.50.1000 455 717 8.9E-77 T 11-10-2018 IPR023214 HAD superfamily syc1785_d ad4e9fbfde4e0fd439e5a6b931a93847 790 Pfam PF00122 E1-E2 ATPase 258 453 1.6E-41 T 11-10-2018 syc1785_d ad4e9fbfde4e0fd439e5a6b931a93847 790 SUPERFAMILY SSF81665 199 735 3.27E-10 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 syc1785_d ad4e9fbfde4e0fd439e5a6b931a93847 790 SUPERFAMILY SSF56784 473 774 1.88E-45 T 11-10-2018 IPR036412 HAD-like superfamily syc1785_d ad4e9fbfde4e0fd439e5a6b931a93847 790 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 168 776 1.8E-197 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 syc1785_d ad4e9fbfde4e0fd439e5a6b931a93847 790 Pfam PF00403 Heavy-metal-associated domain 18 77 2.5E-11 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 syc1785_d ad4e9fbfde4e0fd439e5a6b931a93847 790 Gene3D G3DSA:3.30.70.100 9 89 1.6E-16 T 11-10-2018 syc1785_d ad4e9fbfde4e0fd439e5a6b931a93847 790 ProSitePatterns PS01229 Hypothetical cof family signature 2. 667 689 - T 11-10-2018 syc1712_c 5c448518b8efcfa0cbedfabc4f20ca68 481 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 476 31.091 T 11-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 syc1712_c 5c448518b8efcfa0cbedfabc4f20ca68 481 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 1.9E-26 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 syc1712_c 5c448518b8efcfa0cbedfabc4f20ca68 481 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 1.9E-26 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 syc1712_c 5c448518b8efcfa0cbedfabc4f20ca68 481 PRINTS PR00987 Glutamyl-tRNA synthetase signature 206 214 1.9E-26 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 syc1712_c 5c448518b8efcfa0cbedfabc4f20ca68 481 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 1.9E-26 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 syc1712_c 5c448518b8efcfa0cbedfabc4f20ca68 481 PRINTS PR00987 Glutamyl-tRNA synthetase signature 190 200 1.9E-26 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 syc1712_c 5c448518b8efcfa0cbedfabc4f20ca68 481 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 syc1712_c 5c448518b8efcfa0cbedfabc4f20ca68 481 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 318 1.7E-101 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 syc1712_c 5c448518b8efcfa0cbedfabc4f20ca68 481 SUPERFAMILY SSF48163 312 476 1.83E-32 T 11-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 syc1712_c 5c448518b8efcfa0cbedfabc4f20ca68 481 Gene3D G3DSA:1.10.8.70 328 380 1.1E-9 T 11-10-2018 IPR020752 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 1 GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 syc1712_c 5c448518b8efcfa0cbedfabc4f20ca68 481 SUPERFAMILY SSF52374 3 310 2.23E-108 T 11-10-2018 syc1712_c 5c448518b8efcfa0cbedfabc4f20ca68 481 Gene3D G3DSA:1.10.1160.10 243 326 3.9E-30 T 11-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 syc1712_c 5c448518b8efcfa0cbedfabc4f20ca68 481 Gene3D G3DSA:3.90.800.10 72 196 3.9E-99 T 11-10-2018 syc1712_c 5c448518b8efcfa0cbedfabc4f20ca68 481 Gene3D G3DSA:3.40.50.620 5 241 3.9E-99 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold syc1712_c 5c448518b8efcfa0cbedfabc4f20ca68 481 Gene3D G3DSA:1.10.10.350 382 481 3.3E-20 T 11-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 syc1712_c 5c448518b8efcfa0cbedfabc4f20ca68 481 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 474 4.9E-174 T 11-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 syc0884_d 3ee40fbcfc1fe6a1d17caf2e753bd30b 635 Pfam PF00890 FAD binding domain 35 441 2.8E-50 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 syc0884_d 3ee40fbcfc1fe6a1d17caf2e753bd30b 635 SUPERFAMILY SSF46977 494 634 1.7E-34 T 11-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 syc0884_d 3ee40fbcfc1fe6a1d17caf2e753bd30b 635 Pfam PF02910 Fumarate reductase flavoprotein C-term 502 634 2.2E-31 T 11-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 syc0884_d 3ee40fbcfc1fe6a1d17caf2e753bd30b 635 SUPERFAMILY SSF51905 23 456 1.07E-49 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc0884_d 3ee40fbcfc1fe6a1d17caf2e753bd30b 635 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 405 427 3.5E-5 T 11-10-2018 syc0884_d 3ee40fbcfc1fe6a1d17caf2e753bd30b 635 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 36 55 3.5E-5 T 11-10-2018 syc0884_d 3ee40fbcfc1fe6a1d17caf2e753bd30b 635 Gene3D G3DSA:1.20.58.100 474 590 2.1E-22 T 11-10-2018 syc0884_d 3ee40fbcfc1fe6a1d17caf2e753bd30b 635 Gene3D G3DSA:3.50.50.60 35 451 2.8E-94 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc0884_d 3ee40fbcfc1fe6a1d17caf2e753bd30b 635 TIGRFAM TIGR01811 sdhA_Bsu: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 36 634 1.0E-274 T 11-10-2018 IPR011280 Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 syc0884_d 3ee40fbcfc1fe6a1d17caf2e753bd30b 635 Gene3D G3DSA:3.90.700.10 292 416 2.8E-94 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 syc0884_d 3ee40fbcfc1fe6a1d17caf2e753bd30b 635 SUPERFAMILY SSF56425 261 403 6.8E-30 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 syc0740_d 56c29a1fc6b6346dcd1b9ac76293586f 161 SUPERFAMILY SSF53098 4 157 7.97E-39 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily syc0740_d 56c29a1fc6b6346dcd1b9ac76293586f 161 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 117 152 - T 11-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 syc0740_d 56c29a1fc6b6346dcd1b9ac76293586f 161 Gene3D G3DSA:3.30.420.10 4 160 3.2E-44 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 syc0740_d 56c29a1fc6b6346dcd1b9ac76293586f 161 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 3 158 38.922 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 syc0740_d 56c29a1fc6b6346dcd1b9ac76293586f 161 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 5 154 3.0E-37 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 syc0740_d 56c29a1fc6b6346dcd1b9ac76293586f 161 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 66 82 2.7E-29 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 syc0740_d 56c29a1fc6b6346dcd1b9ac76293586f 161 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 143 155 2.7E-29 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 syc0740_d 56c29a1fc6b6346dcd1b9ac76293586f 161 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 6 19 2.7E-29 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 syc0740_d 56c29a1fc6b6346dcd1b9ac76293586f 161 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 87 103 2.7E-29 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 syc0740_d 56c29a1fc6b6346dcd1b9ac76293586f 161 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 111 130 2.7E-29 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 syc2009_d 6163a1e81b67d6f7c9be3a21ae795f00 291 Pfam PF01040 UbiA prenyltransferase family 7 248 1.3E-37 T 11-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 syc2009_d 6163a1e81b67d6f7c9be3a21ae795f00 291 Gene3D G3DSA:1.10.357.140 4 167 1.5E-11 T 11-10-2018 syc2009_d 6163a1e81b67d6f7c9be3a21ae795f00 291 TIGRFAM TIGR02056 ChlG: chlorophyll synthase ChlG 1 284 6.2E-162 T 11-10-2018 IPR011799 Chlorophyll synthase, ChlG GO:0015995|GO:0016021|GO:0046408 KEGG: 00860+2.5.1.62|MetaCyc: PWY-5064|MetaCyc: PWY-5068|MetaCyc: PWY-5086|MetaCyc: PWY-7764 syc2009_d 6163a1e81b67d6f7c9be3a21ae795f00 291 TIGRFAM TIGR01476 chlor_syn_BchG: bacteriochlorophyll/chlorophyll synthetase 1 283 9.5E-122 T 11-10-2018 IPR006372 Bacteriochlorophyll/chlorophyll synthetase syc0886_c 4460261cd43c7897f936082a23a9f609 430 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 422 6.7E-127 T 11-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 syc0886_c 4460261cd43c7897f936082a23a9f609 430 Pfam PF03952 Enolase, N-terminal domain 9 138 1.6E-55 T 11-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 syc0886_c 4460261cd43c7897f936082a23a9f609 430 Hamap MF_00318 Enolase [eno]. 7 413 44.202 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 syc0886_c 4460261cd43c7897f936082a23a9f609 430 Gene3D G3DSA:3.20.20.120 132 430 4.0E-133 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily syc0886_c 4460261cd43c7897f936082a23a9f609 430 SUPERFAMILY SSF51604 145 421 1.05E-126 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily syc0886_c 4460261cd43c7897f936082a23a9f609 430 SMART SM01193 9 138 4.7E-88 T 11-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 syc0886_c 4460261cd43c7897f936082a23a9f609 430 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 9 422 6.6E-203 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 syc0886_c 4460261cd43c7897f936082a23a9f609 430 PRINTS PR00148 Enolase signature 165 178 3.3E-46 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 syc0886_c 4460261cd43c7897f936082a23a9f609 430 PRINTS PR00148 Enolase signature 111 127 3.3E-46 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 syc0886_c 4460261cd43c7897f936082a23a9f609 430 PRINTS PR00148 Enolase signature 313 324 3.3E-46 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 syc0886_c 4460261cd43c7897f936082a23a9f609 430 PRINTS PR00148 Enolase signature 365 382 3.3E-46 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 syc0886_c 4460261cd43c7897f936082a23a9f609 430 PRINTS PR00148 Enolase signature 336 350 3.3E-46 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 syc0886_c 4460261cd43c7897f936082a23a9f609 430 PRINTS PR00148 Enolase signature 42 56 3.3E-46 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 syc0886_c 4460261cd43c7897f936082a23a9f609 430 SMART SM01192 143 427 9.1E-216 T 11-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 syc0886_c 4460261cd43c7897f936082a23a9f609 430 PIRSF PIRSF001400 6 424 7.1E-187 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 syc0886_c 4460261cd43c7897f936082a23a9f609 430 SUPERFAMILY SSF54826 8 142 1.92E-52 T 11-10-2018 syc0886_c 4460261cd43c7897f936082a23a9f609 430 ProSitePatterns PS00164 Enolase signature. 336 349 - T 11-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc0886_c 4460261cd43c7897f936082a23a9f609 430 Gene3D G3DSA:3.30.390.10 8 131 1.4E-53 T 11-10-2018 IPR029017 Enolase-like, N-terminal syc0657_d 8b216f3713dd8672a8f2cd93dbcc0c3c 105 ProSitePatterns PS00361 Ribosomal protein S10 signature. 32 47 - T 11-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc0657_d 8b216f3713dd8672a8f2cd93dbcc0c3c 105 SMART SM01403 10 104 1.6E-54 T 11-10-2018 IPR027486 Ribosomal protein S10 domain syc0657_d 8b216f3713dd8672a8f2cd93dbcc0c3c 105 Pfam PF00338 Ribosomal protein S10p/S20e 10 104 4.9E-36 T 11-10-2018 IPR027486 Ribosomal protein S10 domain syc0657_d 8b216f3713dd8672a8f2cd93dbcc0c3c 105 SUPERFAMILY SSF54999 8 105 6.15E-39 T 11-10-2018 IPR036838 Ribosomal protein S10 domain superfamily syc0657_d 8b216f3713dd8672a8f2cd93dbcc0c3c 105 PRINTS PR00971 Ribosomal protein S10 family signature 64 78 4.5E-20 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc0657_d 8b216f3713dd8672a8f2cd93dbcc0c3c 105 PRINTS PR00971 Ribosomal protein S10 family signature 43 58 4.5E-20 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc0657_d 8b216f3713dd8672a8f2cd93dbcc0c3c 105 PRINTS PR00971 Ribosomal protein S10 family signature 8 21 4.5E-20 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc0657_d 8b216f3713dd8672a8f2cd93dbcc0c3c 105 Gene3D G3DSA:3.30.70.600 4 105 2.2E-39 T 11-10-2018 IPR036838 Ribosomal protein S10 domain superfamily syc0657_d 8b216f3713dd8672a8f2cd93dbcc0c3c 105 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 7 104 1.0E-46 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc0657_d 8b216f3713dd8672a8f2cd93dbcc0c3c 105 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 6 105 27.709 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc1897_d 95bf0ef1641cc1bf4bf02b20ff5d3216 163 Gene3D G3DSA:2.60.120.10 19 130 1.2E-16 T 11-10-2018 IPR014710 RmlC-like jelly roll fold syc1897_d 95bf0ef1641cc1bf4bf02b20ff5d3216 163 SUPERFAMILY SSF51182 18 157 1.15E-25 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily syc1897_d 95bf0ef1641cc1bf4bf02b20ff5d3216 163 Pfam PF07883 Cupin domain 48 113 2.0E-14 T 11-10-2018 IPR013096 Cupin 2, conserved barrel syc0589_d 953b18563a761162868693b3d0b08ad4 154 SUPERFAMILY SSF88697 1 149 1.41E-54 T 11-10-2018 IPR015947 PUA-like superfamily syc0589_d 953b18563a761162868693b3d0b08ad4 154 Gene3D G3DSA:3.10.590.10 1 151 3.0E-52 T 11-10-2018 syc0589_d 953b18563a761162868693b3d0b08ad4 154 Pfam PF01878 EVE domain 2 147 2.6E-47 T 11-10-2018 IPR002740 EVE domain syc1629_c 04f7a639cca2eb49ef330c9aa58a5036 466 TIGRFAM TIGR00838 argH: argininosuccinate lyase 10 462 2.5E-194 T 11-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 syc1629_c 04f7a639cca2eb49ef330c9aa58a5036 466 Pfam PF14698 Argininosuccinate lyase C-terminal 370 438 9.9E-24 T 11-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 syc1629_c 04f7a639cca2eb49ef330c9aa58a5036 466 Gene3D G3DSA:1.20.200.10 125 453 2.5E-184 T 11-10-2018 syc1629_c 04f7a639cca2eb49ef330c9aa58a5036 466 SUPERFAMILY SSF48557 13 463 1.07E-146 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 syc1629_c 04f7a639cca2eb49ef330c9aa58a5036 466 PRINTS PR00145 Argininosuccinate lyase family signature 237 261 6.6E-67 T 11-10-2018 syc1629_c 04f7a639cca2eb49ef330c9aa58a5036 466 PRINTS PR00145 Argininosuccinate lyase family signature 281 297 6.6E-67 T 11-10-2018 syc1629_c 04f7a639cca2eb49ef330c9aa58a5036 466 PRINTS PR00145 Argininosuccinate lyase family signature 199 215 6.6E-67 T 11-10-2018 syc1629_c 04f7a639cca2eb49ef330c9aa58a5036 466 PRINTS PR00145 Argininosuccinate lyase family signature 107 129 6.6E-67 T 11-10-2018 syc1629_c 04f7a639cca2eb49ef330c9aa58a5036 466 PRINTS PR00145 Argininosuccinate lyase family signature 148 168 6.6E-67 T 11-10-2018 syc1629_c 04f7a639cca2eb49ef330c9aa58a5036 466 PRINTS PR00145 Argininosuccinate lyase family signature 316 335 6.6E-67 T 11-10-2018 syc1629_c 04f7a639cca2eb49ef330c9aa58a5036 466 PRINTS PR00149 Fumarate lyase superfamily signature 237 264 3.0E-28 T 11-10-2018 IPR000362 Fumarate lyase family syc1629_c 04f7a639cca2eb49ef330c9aa58a5036 466 PRINTS PR00149 Fumarate lyase superfamily signature 108 126 3.0E-28 T 11-10-2018 IPR000362 Fumarate lyase family syc1629_c 04f7a639cca2eb49ef330c9aa58a5036 466 PRINTS PR00149 Fumarate lyase superfamily signature 153 171 3.0E-28 T 11-10-2018 IPR000362 Fumarate lyase family syc1629_c 04f7a639cca2eb49ef330c9aa58a5036 466 PRINTS PR00149 Fumarate lyase superfamily signature 281 297 3.0E-28 T 11-10-2018 IPR000362 Fumarate lyase family syc1629_c 04f7a639cca2eb49ef330c9aa58a5036 466 Pfam PF00206 Lyase 13 306 2.2E-73 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal syc1629_c 04f7a639cca2eb49ef330c9aa58a5036 466 Gene3D G3DSA:1.10.275.10 31 235 2.5E-184 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal syc1629_c 04f7a639cca2eb49ef330c9aa58a5036 466 Hamap MF_00006 Argininosuccinate lyase [argH]. 8 460 42.544 T 11-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 syc1629_c 04f7a639cca2eb49ef330c9aa58a5036 466 Gene3D G3DSA:1.10.40.30 367 439 2.5E-184 T 11-10-2018 syc0586_c f61308379fac6ff212e93441c321f2c9 380 SMART SM00833 279 367 4.4E-19 T 11-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal syc0586_c f61308379fac6ff212e93441c321f2c9 380 Gene3D G3DSA:3.30.1220.10 258 368 1.9E-15 T 11-10-2018 IPR036627 CobW-like, C-terminal domain superfamily syc0586_c f61308379fac6ff212e93441c321f2c9 380 Gene3D G3DSA:3.40.50.300 18 214 1.8E-69 T 11-10-2018 syc0586_c f61308379fac6ff212e93441c321f2c9 380 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 279 367 7.7E-24 T 11-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal syc0586_c f61308379fac6ff212e93441c321f2c9 380 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 20 195 1.8E-56 T 11-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain syc0586_c f61308379fac6ff212e93441c321f2c9 380 SUPERFAMILY SSF90002 279 367 4.18E-22 T 11-10-2018 syc0586_c f61308379fac6ff212e93441c321f2c9 380 SUPERFAMILY SSF52540 20 222 1.57E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc1876_d 2a1af4d15481889d55eb4f59635da331 113 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 48 112 9.5E-21 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc1876_d 2a1af4d15481889d55eb4f59635da331 113 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 11 112 9.0E-36 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc1876_d 2a1af4d15481889d55eb4f59635da331 113 SUPERFAMILY SSF50104 9 111 2.63E-33 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily syc1876_d 2a1af4d15481889d55eb4f59635da331 113 Gene3D G3DSA:2.30.30.30 2 111 3.0E-35 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 syc1876_d 2a1af4d15481889d55eb4f59635da331 113 ProSitePatterns PS01108 Ribosomal protein L24 signature. 16 33 - T 11-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc1876_d 2a1af4d15481889d55eb4f59635da331 113 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 11 104 18.856 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc1876_d 2a1af4d15481889d55eb4f59635da331 113 Pfam PF00467 KOW motif 15 46 1.7E-8 T 11-10-2018 IPR005824 KOW syc1876_d 2a1af4d15481889d55eb4f59635da331 113 SMART SM00739 12 39 9.5E-7 T 11-10-2018 IPR005824 KOW syc1559_d 5495fcf56e30b7f48446b2f96db09306 770 Gene3D G3DSA:3.90.870.50 14 369 2.8E-141 T 11-10-2018 syc1559_d 5495fcf56e30b7f48446b2f96db09306 770 PIRSF PIRSF006256 7 753 2.8E-250 T 11-10-2018 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 syc1559_d 5495fcf56e30b7f48446b2f96db09306 770 Gene3D G3DSA:3.30.110.120 260 378 2.8E-141 T 11-10-2018 syc1559_d 5495fcf56e30b7f48446b2f96db09306 770 Gene3D G3DSA:3.30.420.360 390 744 3.4E-98 T 11-10-2018 syc1559_d 5495fcf56e30b7f48446b2f96db09306 770 SUPERFAMILY SSF54975 8 95 3.05E-20 T 11-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 syc1559_d 5495fcf56e30b7f48446b2f96db09306 770 TIGRFAM TIGR00143 hypF: carbamoyltransferase HypF 14 746 2.5E-217 T 11-10-2018 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 syc1559_d 5495fcf56e30b7f48446b2f96db09306 770 Gene3D G3DSA:3.30.420.350 487 732 3.4E-98 T 11-10-2018 syc1559_d 5495fcf56e30b7f48446b2f96db09306 770 Pfam PF00708 Acylphosphatase 13 94 5.3E-19 T 11-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 syc1559_d 5495fcf56e30b7f48446b2f96db09306 770 Pfam PF07503 HypF finger 164 196 5.8E-18 T 11-10-2018 IPR011125 Zinc finger, HypF-type GO:0008270 syc1559_d 5495fcf56e30b7f48446b2f96db09306 770 Pfam PF07503 HypF finger 115 147 7.0E-13 T 11-10-2018 IPR011125 Zinc finger, HypF-type GO:0008270 syc1559_d 5495fcf56e30b7f48446b2f96db09306 770 Pfam PF01300 Telomere recombination 217 391 9.3E-48 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 syc1559_d 5495fcf56e30b7f48446b2f96db09306 770 SUPERFAMILY SSF55821 181 398 2.29E-48 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily syc1332_d 80141b053138332177aee65dba1c08b6 373 SMART SM00382 95 281 9.8E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain syc1332_d 80141b053138332177aee65dba1c08b6 373 ProSitePatterns PS00211 ABC transporters family signature. 203 217 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 syc1332_d 80141b053138332177aee65dba1c08b6 373 Gene3D G3DSA:3.40.50.300 51 320 2.3E-54 T 11-10-2018 syc1332_d 80141b053138332177aee65dba1c08b6 373 Pfam PF00005 ABC transporter 87 230 1.0E-23 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 syc1332_d 80141b053138332177aee65dba1c08b6 373 SUPERFAMILY SSF52540 71 299 2.05E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc2347_c af1fb68895ba871a93215b9dbe9758a3 136 SUPERFAMILY SSF54637 4 131 1.53E-33 T 11-10-2018 IPR029069 HotDog domain superfamily syc2347_c af1fb68895ba871a93215b9dbe9758a3 136 Hamap MF_02101 1,4-dihydroxy-2-naphthoyl-CoA hydrolase. 4 136 31.858 T 11-10-2018 IPR022829 1,4-dihydroxy-2-naphthoyl-CoA hydrolase GO:0016790 KEGG: 00130+3.1.2.28|MetaCyc: PWY-5837 syc2347_c af1fb68895ba871a93215b9dbe9758a3 136 Pfam PF13279 Thioesterase-like superfamily 11 131 1.1E-14 T 11-10-2018 syc2347_c af1fb68895ba871a93215b9dbe9758a3 136 Gene3D G3DSA:3.10.129.10 2 135 3.4E-36 T 11-10-2018 syc1927_c 0d912a5802c0ff30eb52719fd39847c4 794 TIGRFAM TIGR01073 pcrA: ATP-dependent DNA helicase PcrA 5 791 1.3E-285 T 11-10-2018 IPR005751 ATP-dependent DNA helicase PcrA GO:0004003|GO:0005737|GO:0006268 syc1927_c 0d912a5802c0ff30eb52719fd39847c4 794 SUPERFAMILY SSF52540 3 693 2.2E-166 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc1927_c 0d912a5802c0ff30eb52719fd39847c4 794 Gene3D G3DSA:3.40.50.300 9 318 5.3E-86 T 11-10-2018 syc1927_c 0d912a5802c0ff30eb52719fd39847c4 794 Pfam PF13361 UvrD-like helicase C-terminal domain 331 667 4.8E-71 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 syc1927_c 0d912a5802c0ff30eb52719fd39847c4 794 Pfam PF00580 UvrD/REP helicase N-terminal domain 9 318 3.8E-80 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 syc1927_c 0d912a5802c0ff30eb52719fd39847c4 794 Gene3D G3DSA:1.10.486.10 438 600 4.6E-121 T 11-10-2018 syc1927_c 0d912a5802c0ff30eb52719fd39847c4 794 Gene3D G3DSA:1.10.10.160 145 225 5.3E-86 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily syc1927_c 0d912a5802c0ff30eb52719fd39847c4 794 Gene3D G3DSA:3.40.50.300 334 686 4.6E-121 T 11-10-2018 syc2042_d 24627f4b5413d8934ee9157962ca8610 480 SUPERFAMILY SSF53098 185 465 1.08E-17 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily syc2042_d 24627f4b5413d8934ee9157962ca8610 480 Pfam PF13482 RNase_H superfamily 288 457 4.4E-45 T 11-10-2018 IPR038720 YprB, ribonuclease H-like domain syc2042_d 24627f4b5413d8934ee9157962ca8610 480 TIGRFAM TIGR03491 TIGR03491: putative RecB family nuclease, TM0106 family 5 457 2.2E-174 T 11-10-2018 IPR019993 RecB family nuclease, TM0106, putative syc1764_c 7da6c1557fd4adbc97b6ce5423daf881 345 SUPERFAMILY SSF53613 29 332 2.34E-52 T 11-10-2018 IPR029056 Ribokinase-like syc1764_c 7da6c1557fd4adbc97b6ce5423daf881 345 Pfam PF00294 pfkB family carbohydrate kinase 29 327 6.7E-40 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB syc1764_c 7da6c1557fd4adbc97b6ce5423daf881 345 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 282 295 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 syc1764_c 7da6c1557fd4adbc97b6ce5423daf881 345 Gene3D G3DSA:3.40.1190.20 22 332 3.8E-94 T 11-10-2018 IPR029056 Ribokinase-like syc1863_c 983622fa416d14baca1dbdf943230492 235 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 24 219 6.2E-66 T 11-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 syc1863_c 983622fa416d14baca1dbdf943230492 235 Gene3D G3DSA:3.40.1280.10 1 172 1.2E-62 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal syc1863_c 983622fa416d14baca1dbdf943230492 235 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 235 104.253 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 syc1863_c 983622fa416d14baca1dbdf943230492 235 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 230 5.3E-96 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 syc1863_c 983622fa416d14baca1dbdf943230492 235 SUPERFAMILY SSF75217 1 231 6.35E-94 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases syc1863_c 983622fa416d14baca1dbdf943230492 235 Gene3D G3DSA:1.10.1270.20 173 231 4.5E-31 T 11-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 syc1863_c 983622fa416d14baca1dbdf943230492 235 PIRSF PIRSF000386 1 235 1.2E-93 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 syc1802_c c695203abe0667a7233e12bc31f2cf06 207 Pfam PF01330 RuvA N terminal domain 1 66 2.9E-18 T 11-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 syc1802_c c695203abe0667a7233e12bc31f2cf06 207 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 202 1.4E-51 T 11-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 syc1802_c c695203abe0667a7233e12bc31f2cf06 207 SUPERFAMILY SSF46929 157 206 6.02E-5 T 11-10-2018 IPR036267 RuvA, C-terminal domain superfamily syc1802_c c695203abe0667a7233e12bc31f2cf06 207 SMART SM00278 77 96 10.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 syc1802_c c695203abe0667a7233e12bc31f2cf06 207 SMART SM00278 112 131 1.5 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 syc1802_c c695203abe0667a7233e12bc31f2cf06 207 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 206 29.437 T 11-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 syc1802_c c695203abe0667a7233e12bc31f2cf06 207 Pfam PF14520 Helix-hairpin-helix domain 76 133 1.2E-14 T 11-10-2018 syc1802_c c695203abe0667a7233e12bc31f2cf06 207 Gene3D G3DSA:1.10.150.20 71 144 5.1E-24 T 11-10-2018 syc1802_c c695203abe0667a7233e12bc31f2cf06 207 Gene3D G3DSA:2.40.50.140 1 69 1.2E-19 T 11-10-2018 syc1802_c c695203abe0667a7233e12bc31f2cf06 207 SUPERFAMILY SSF47781 70 140 1.48E-20 T 11-10-2018 IPR010994 RuvA domain 2-like syc1802_c c695203abe0667a7233e12bc31f2cf06 207 Pfam PF07499 RuvA, C-terminal domain 157 206 8.4E-15 T 11-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 syc1802_c c695203abe0667a7233e12bc31f2cf06 207 SUPERFAMILY SSF50249 1 67 7.42E-14 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold syc0011_d 1a95e7779b22978c07cd59d8713289cf 297 Pfam PF02811 PHP domain 30 105 2.3E-11 T 11-10-2018 IPR004013 PHP domain GO:0003824 syc0011_d 1a95e7779b22978c07cd59d8713289cf 297 SUPERFAMILY SSF89550 28 276 6.41E-45 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 syc0011_d 1a95e7779b22978c07cd59d8713289cf 297 Gene3D G3DSA:3.20.20.140 30 266 2.9E-76 T 11-10-2018 syc0011_d 1a95e7779b22978c07cd59d8713289cf 297 SMART SM00481 29 93 3.2E-19 T 11-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal syc0011_d 1a95e7779b22978c07cd59d8713289cf 297 Gene3D G3DSA:1.10.150.650 119 187 2.9E-76 T 11-10-2018 syc1428_c 109c8b495ccfc54339d126d7f7fbc947 253 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 29 250 4.9E-48 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF syc1428_c 109c8b495ccfc54339d126d7f7fbc947 253 SMART SM00079 27 251 8.9E-6 T 11-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 syc1428_c 109c8b495ccfc54339d126d7f7fbc947 253 SMART SM00062 27 252 3.5E-42 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF syc1428_c 109c8b495ccfc54339d126d7f7fbc947 253 SUPERFAMILY SSF53850 8 249 1.77E-51 T 11-10-2018 syc1428_c 109c8b495ccfc54339d126d7f7fbc947 253 Gene3D G3DSA:3.40.190.10 27 241 1.4E-49 T 11-10-2018 syc1428_c 109c8b495ccfc54339d126d7f7fbc947 253 Gene3D G3DSA:3.40.190.10 119 211 1.4E-49 T 11-10-2018 syc2354_c 9576a2aaea6017f5fcafd2adcfa2e6f9 442 Pfam PF01458 Uncharacterized protein family (UPF0051) 182 408 1.5E-70 T 11-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 syc2354_c 9576a2aaea6017f5fcafd2adcfa2e6f9 442 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 146 425 1.2E-86 T 11-10-2018 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 syc2354_c 9576a2aaea6017f5fcafd2adcfa2e6f9 442 SUPERFAMILY SSF101960 42 432 7.85E-104 T 11-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily syc0256_c 5efbad00f940ecd57baf999d8c152f63 469 Pfam PF00390 Malic enzyme, N-terminal domain 98 228 1.2E-28 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 syc0256_c 5efbad00f940ecd57baf999d8c152f63 469 SUPERFAMILY SSF53223 87 238 9.35E-56 T 11-10-2018 syc0256_c 5efbad00f940ecd57baf999d8c152f63 469 SUPERFAMILY SSF51735 240 465 9.38E-73 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily syc0256_c 5efbad00f940ecd57baf999d8c152f63 469 SMART SM01274 95 228 1.3E-82 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 syc0256_c 5efbad00f940ecd57baf999d8c152f63 469 Pfam PF03949 Malic enzyme, NAD binding domain 242 456 8.0E-26 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 syc0256_c 5efbad00f940ecd57baf999d8c152f63 469 SMART SM00919 240 457 1.1E-115 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 syc0256_c 5efbad00f940ecd57baf999d8c152f63 469 Gene3D G3DSA:3.40.50.720 238 469 4.6E-77 T 11-10-2018 syc0256_c 5efbad00f940ecd57baf999d8c152f63 469 PIRSF PIRSF000106 106 468 1.5E-81 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 syc0256_c 5efbad00f940ecd57baf999d8c152f63 469 Gene3D G3DSA:3.40.50.10380 55 237 2.9E-71 T 11-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 syc1977_d ba8319941aaa5e67227a6300294d919c 284 Gene3D G3DSA:3.40.630.90 150 284 2.7E-10 T 11-10-2018 syc1977_d ba8319941aaa5e67227a6300294d919c 284 SUPERFAMILY SSF55729 6 264 8.4E-44 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase syc1977_d ba8319941aaa5e67227a6300294d919c 284 Pfam PF00583 Acetyltransferase (GNAT) family 34 96 5.8E-6 T 11-10-2018 IPR000182 GNAT domain syc1977_d ba8319941aaa5e67227a6300294d919c 284 Gene3D G3DSA:3.40.630.30 2 122 1.3E-10 T 11-10-2018 syc1368_c 9368954fa4a62624e30c11144e8f66fb 387 TIGRFAM TIGR00109 hemH: ferrochelatase 2 322 2.8E-125 T 11-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 syc1368_c 9368954fa4a62624e30c11144e8f66fb 387 Gene3D G3DSA:3.40.50.1400 4 323 1.9E-129 T 11-10-2018 syc1368_c 9368954fa4a62624e30c11144e8f66fb 387 SUPERFAMILY SSF53800 1 333 2.35E-118 T 11-10-2018 syc1368_c 9368954fa4a62624e30c11144e8f66fb 387 Hamap MF_00323 Ferrochelatase [hemH]. 2 322 39.39 T 11-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 syc1368_c 9368954fa4a62624e30c11144e8f66fb 387 Gene3D G3DSA:3.40.50.1400 163 303 1.9E-129 T 11-10-2018 syc1368_c 9368954fa4a62624e30c11144e8f66fb 387 SUPERFAMILY SSF103511 343 386 1.7E-10 T 11-10-2018 syc1368_c 9368954fa4a62624e30c11144e8f66fb 387 ProSitePatterns PS00534 Ferrochelatase signature. 191 210 - T 11-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 syc1368_c 9368954fa4a62624e30c11144e8f66fb 387 Pfam PF00762 Ferrochelatase 4 321 1.7E-121 T 11-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 syc2126_c a097b8345725b9e1ef65279e9353b367 125 Pfam PF14250 AbrB-like transcriptional regulator 48 113 1.5E-28 T 11-10-2018 IPR027360 AbrB-like transcriptional regulator syc2245_c 8e4cd369b43712d0ae837f87b238e2eb 398 SUPERFAMILY SSF88659 236 308 7.85E-17 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like syc2245_c 8e4cd369b43712d0ae837f87b238e2eb 398 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 355 381 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 syc2245_c 8e4cd369b43712d0ae837f87b238e2eb 398 SUPERFAMILY SSF88659 294 394 1.31E-25 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like syc2245_c 8e4cd369b43712d0ae837f87b238e2eb 398 Pfam PF04542 Sigma-70 region 2 163 232 9.2E-23 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 syc2245_c 8e4cd369b43712d0ae837f87b238e2eb 398 PRINTS PR00046 Major sigma-70 factor signature 211 219 4.6E-26 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 syc2245_c 8e4cd369b43712d0ae837f87b238e2eb 398 PRINTS PR00046 Major sigma-70 factor signature 334 346 4.6E-26 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 syc2245_c 8e4cd369b43712d0ae837f87b238e2eb 398 PRINTS PR00046 Major sigma-70 factor signature 187 200 4.6E-26 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 syc2245_c 8e4cd369b43712d0ae837f87b238e2eb 398 PRINTS PR00046 Major sigma-70 factor signature 355 370 4.6E-26 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 syc2245_c 8e4cd369b43712d0ae837f87b238e2eb 398 PRINTS PR00046 Major sigma-70 factor signature 370 381 4.6E-26 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 syc2245_c 8e4cd369b43712d0ae837f87b238e2eb 398 Pfam PF00140 Sigma-70 factor, region 1.2 42 74 1.5E-7 T 11-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 syc2245_c 8e4cd369b43712d0ae837f87b238e2eb 398 Pfam PF04539 Sigma-70 region 3 242 316 7.0E-26 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 syc2245_c 8e4cd369b43712d0ae837f87b238e2eb 398 Gene3D G3DSA:1.10.10.10 236 310 3.0E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily syc2245_c 8e4cd369b43712d0ae837f87b238e2eb 398 Gene3D G3DSA:1.10.10.10 312 395 1.4E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily syc2245_c 8e4cd369b43712d0ae837f87b238e2eb 398 Gene3D G3DSA:1.20.120.1810 38 232 1.7E-55 T 11-10-2018 syc2245_c 8e4cd369b43712d0ae837f87b238e2eb 398 SUPERFAMILY SSF88946 39 233 5.02E-54 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 syc2245_c 8e4cd369b43712d0ae837f87b238e2eb 398 TIGRFAM TIGR02997 Sig70-cyanoRpoD: RNA polymerase sigma factor, cyanobacterial RpoD-like family 42 382 1.2E-135 T 11-10-2018 IPR017848 RNA polymerase sigma factor, RpoD-like, cyanobacteria syc2245_c 8e4cd369b43712d0ae837f87b238e2eb 398 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 159 383 9.5E-36 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 syc2245_c 8e4cd369b43712d0ae837f87b238e2eb 398 Pfam PF04545 Sigma-70, region 4 331 383 1.2E-18 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 syc2245_c 8e4cd369b43712d0ae837f87b238e2eb 398 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 187 200 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 syc2237_d 9e3381c9720b211f09933e44afd7419d 296 Gene3D G3DSA:1.10.1040.10 169 293 2.4E-24 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 syc2237_d 9e3381c9720b211f09933e44afd7419d 296 PIRSF PIRSF000103 4 295 1.5E-70 T 11-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 syc2237_d 9e3381c9720b211f09933e44afd7419d 296 Gene3D G3DSA:3.40.50.720 4 162 4.0E-40 T 11-10-2018 syc2237_d 9e3381c9720b211f09933e44afd7419d 296 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 11 161 1.9E-28 T 11-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 syc2237_d 9e3381c9720b211f09933e44afd7419d 296 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 170 290 3.4E-15 T 11-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 syc2237_d 9e3381c9720b211f09933e44afd7419d 296 SUPERFAMILY SSF51735 9 168 5.71E-32 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily syc2237_d 9e3381c9720b211f09933e44afd7419d 296 SUPERFAMILY SSF48179 168 293 7.03E-24 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 syc1643_d fee54a48683bba97d5c5bdeb3c2fe1b0 477 Gene3D G3DSA:3.75.10.10 53 460 2.0E-111 T 11-10-2018 syc1643_d fee54a48683bba97d5c5bdeb3c2fe1b0 477 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 66 453 2.9E-89 T 11-10-2018 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 syc1643_d fee54a48683bba97d5c5bdeb3c2fe1b0 477 SUPERFAMILY SSF55909 61 453 6.48E-89 T 11-10-2018 syc1586_d aa48059a4c5e91b8d51573b8ac7e5155 770 Gene3D G3DSA:3.40.50.1010 328 474 7.6E-24 T 11-10-2018 syc1586_d aa48059a4c5e91b8d51573b8ac7e5155 770 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 5 297 32.211 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 syc1586_d aa48059a4c5e91b8d51573b8ac7e5155 770 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 155 295 6.3E-44 T 11-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 syc1586_d aa48059a4c5e91b8d51573b8ac7e5155 770 SMART SM00670 331 459 9.7E-20 T 11-10-2018 IPR002716 PIN domain syc1586_d aa48059a4c5e91b8d51573b8ac7e5155 770 Gene3D G3DSA:3.40.50.720 41 162 4.0E-26 T 11-10-2018 syc1586_d aa48059a4c5e91b8d51573b8ac7e5155 770 Gene3D G3DSA:3.40.50.720 6 40 1.8E-7 T 11-10-2018 syc1586_d aa48059a4c5e91b8d51573b8ac7e5155 770 SUPERFAMILY SSF88723 330 473 5.61E-16 T 11-10-2018 IPR029060 PIN-like domain superfamily syc1586_d aa48059a4c5e91b8d51573b8ac7e5155 770 SUPERFAMILY SSF52540 366 750 3.17E-28 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc1586_d aa48059a4c5e91b8d51573b8ac7e5155 770 SUPERFAMILY SSF48179 155 306 4.93E-48 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 syc1586_d aa48059a4c5e91b8d51573b8ac7e5155 770 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 163 184 - T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 syc1586_d aa48059a4c5e91b8d51573b8ac7e5155 770 Gene3D G3DSA:1.10.1040.10 164 312 3.4E-45 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 syc1586_d aa48059a4c5e91b8d51573b8ac7e5155 770 SUPERFAMILY SSF51735 7 153 2.12E-32 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily syc1586_d aa48059a4c5e91b8d51573b8ac7e5155 770 Pfam PF13638 PIN domain 333 472 7.1E-37 T 11-10-2018 IPR002716 PIN domain syc1586_d aa48059a4c5e91b8d51573b8ac7e5155 770 Gene3D G3DSA:3.40.50.300 550 768 3.1E-71 T 11-10-2018 syc1586_d aa48059a4c5e91b8d51573b8ac7e5155 770 Pfam PF02562 PhoH-like protein 553 764 7.5E-56 T 11-10-2018 IPR003714 PhoH-like protein GO:0005524 syc1586_d aa48059a4c5e91b8d51573b8ac7e5155 770 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 38 135 9.1E-16 T 11-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 syc0671_c d2f1d958f30316bfb128e6a655e57351 196 SUPERFAMILY SSF47781 39 121 3.78E-9 T 11-10-2018 IPR010994 RuvA domain 2-like syc0671_c d2f1d958f30316bfb128e6a655e57351 196 Pfam PF12836 Helix-hairpin-helix motif 137 192 9.8E-8 T 11-10-2018 syc0671_c d2f1d958f30316bfb128e6a655e57351 196 Gene3D G3DSA:1.10.150.280 128 193 8.1E-6 T 11-10-2018 syc0671_c d2f1d958f30316bfb128e6a655e57351 196 SUPERFAMILY SSF47781 121 196 7.11E-11 T 11-10-2018 IPR010994 RuvA domain 2-like syc2116_c 9dce948808ec01c54319b442ae10f542 329 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 4.5E-23 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 syc2116_c 9dce948808ec01c54319b442ae10f542 329 SUPERFAMILY SSF46785 4 116 3.18E-25 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily syc2116_c 9dce948808ec01c54319b442ae10f542 329 Pfam PF03466 LysR substrate binding domain 95 301 5.8E-48 T 11-10-2018 IPR005119 LysR, substrate-binding syc2116_c 9dce948808ec01c54319b442ae10f542 329 Gene3D G3DSA:3.40.190.290 96 308 2.4E-48 T 11-10-2018 syc2116_c 9dce948808ec01c54319b442ae10f542 329 Gene3D G3DSA:1.10.10.10 6 94 8.9E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily syc2116_c 9dce948808ec01c54319b442ae10f542 329 SUPERFAMILY SSF53850 95 305 1.41E-45 T 11-10-2018 syc2116_c 9dce948808ec01c54319b442ae10f542 329 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.5E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 syc2116_c 9dce948808ec01c54319b442ae10f542 329 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.5E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 syc2116_c 9dce948808ec01c54319b442ae10f542 329 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.5E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 syc2011_d 730d0bf8f1a18276babba8d327242e80 662 Pfam PF00009 Elongation factor Tu GTP binding domain 9 265 1.8E-27 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 syc2011_d 730d0bf8f1a18276babba8d327242e80 662 Pfam PF14492 Elongation Factor G, domain II 372 442 1.9E-22 T 11-10-2018 syc2011_d 730d0bf8f1a18276babba8d327242e80 662 Gene3D G3DSA:2.40.30.10 280 366 2.0E-13 T 11-10-2018 syc2011_d 730d0bf8f1a18276babba8d327242e80 662 Gene3D G3DSA:3.30.70.240 570 643 6.4E-67 T 11-10-2018 syc2011_d 730d0bf8f1a18276babba8d327242e80 662 SMART SM00889 446 564 1.7E-58 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 syc2011_d 730d0bf8f1a18276babba8d327242e80 662 Pfam PF03764 Elongation factor G, domain IV 445 563 2.5E-38 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 syc2011_d 730d0bf8f1a18276babba8d327242e80 662 SMART SM00838 566 656 2.6E-13 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like syc2011_d 730d0bf8f1a18276babba8d327242e80 662 Gene3D G3DSA:3.30.70.870 372 449 3.0E-21 T 11-10-2018 syc2011_d 730d0bf8f1a18276babba8d327242e80 662 SUPERFAMILY SSF50447 251 358 9.08E-13 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily syc2011_d 730d0bf8f1a18276babba8d327242e80 662 Gene3D G3DSA:3.40.50.300 4 271 3.6E-48 T 11-10-2018 syc2011_d 730d0bf8f1a18276babba8d327242e80 662 SUPERFAMILY SSF54211 445 565 9.1E-36 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold syc2011_d 730d0bf8f1a18276babba8d327242e80 662 SUPERFAMILY SSF52540 8 265 1.54E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc2011_d 730d0bf8f1a18276babba8d327242e80 662 SUPERFAMILY SSF54980 371 445 6.83E-18 T 11-10-2018 IPR035647 EF-G domain III/V-like syc2011_d 730d0bf8f1a18276babba8d327242e80 662 Gene3D G3DSA:3.30.230.10 450 655 6.4E-67 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup syc2011_d 730d0bf8f1a18276babba8d327242e80 662 SUPERFAMILY SSF54980 569 658 4.65E-16 T 11-10-2018 IPR035647 EF-G domain III/V-like syc2011_d 730d0bf8f1a18276babba8d327242e80 662 Pfam PF00679 Elongation factor G C-terminus 567 655 1.2E-15 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like syc1165_d 9bb38279dd8f3cf1b270319a30898017 356 Pfam PF00154 recA bacterial DNA recombination protein 14 274 1.5E-138 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 syc1165_d 9bb38279dd8f3cf1b270319a30898017 356 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 11 330 1.6E-165 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 syc1165_d 9bb38279dd8f3cf1b270319a30898017 356 Gene3D G3DSA:3.30.250.10 274 351 2.3E-22 T 11-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal syc1165_d 9bb38279dd8f3cf1b270319a30898017 356 SUPERFAMILY SSF54752 275 331 1.96E-18 T 11-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal syc1165_d 9bb38279dd8f3cf1b270319a30898017 356 PRINTS PR00142 RecA protein signature 216 244 1.9E-82 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 syc1165_d 9bb38279dd8f3cf1b270319a30898017 356 PRINTS PR00142 RecA protein signature 171 200 1.9E-82 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 syc1165_d 9bb38279dd8f3cf1b270319a30898017 356 PRINTS PR00142 RecA protein signature 249 278 1.9E-82 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 syc1165_d 9bb38279dd8f3cf1b270319a30898017 356 PRINTS PR00142 RecA protein signature 99 128 1.9E-82 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 syc1165_d 9bb38279dd8f3cf1b270319a30898017 356 PRINTS PR00142 RecA protein signature 303 320 1.9E-82 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 syc1165_d 9bb38279dd8f3cf1b270319a30898017 356 PRINTS PR00142 RecA protein signature 133 162 1.9E-82 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 syc1165_d 9bb38279dd8f3cf1b270319a30898017 356 SMART SM00382 63 234 5.3E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain syc1165_d 9bb38279dd8f3cf1b270319a30898017 356 Gene3D G3DSA:3.40.50.300 33 273 4.4E-81 T 11-10-2018 syc1165_d 9bb38279dd8f3cf1b270319a30898017 356 SUPERFAMILY SSF52540 12 273 5.08E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc1165_d 9bb38279dd8f3cf1b270319a30898017 356 ProSitePatterns PS00321 recA signature. 219 227 - T 11-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 syc1165_d 9bb38279dd8f3cf1b270319a30898017 356 Hamap MF_00268 Protein RecA [recA]. 12 335 50.069 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 syc1779_c e22e0b98ea23a113db5d2b60ddfc50c3 87 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 11-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 syc1779_c e22e0b98ea23a113db5d2b60ddfc50c3 87 Pfam PF00462 Glutaredoxin 4 64 6.6E-22 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 syc1779_c e22e0b98ea23a113db5d2b60ddfc50c3 87 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 83 2.6E-37 T 11-10-2018 IPR011900 Glutaredoxin, GrxC GO:0045454 syc1779_c e22e0b98ea23a113db5d2b60ddfc50c3 87 Gene3D G3DSA:3.40.30.10 2 83 1.1E-27 T 11-10-2018 syc1779_c e22e0b98ea23a113db5d2b60ddfc50c3 87 SUPERFAMILY SSF52833 3 84 1.49E-26 T 11-10-2018 IPR036249 Thioredoxin-like superfamily syc1779_c e22e0b98ea23a113db5d2b60ddfc50c3 87 PRINTS PR00160 Glutaredoxin signature 4 22 2.2E-16 T 11-10-2018 IPR014025 Glutaredoxin subgroup syc1779_c e22e0b98ea23a113db5d2b60ddfc50c3 87 PRINTS PR00160 Glutaredoxin signature 61 74 2.2E-16 T 11-10-2018 IPR014025 Glutaredoxin subgroup syc1779_c e22e0b98ea23a113db5d2b60ddfc50c3 87 PRINTS PR00160 Glutaredoxin signature 47 60 2.2E-16 T 11-10-2018 IPR014025 Glutaredoxin subgroup syc0287_c 164500f04484faf3dcea23191f3baf04 534 Gene3D G3DSA:1.20.1530.20 22 419 1.6E-18 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily syc0287_c 164500f04484faf3dcea23191f3baf04 534 Pfam PF00999 Sodium/hydrogen exchanger family 31 406 1.0E-71 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 syc1220_c cdbd1ef201b9a99ba89edd857e515377 408 Pfam PF02441 Flavoprotein 11 181 9.6E-38 T 11-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 syc1220_c cdbd1ef201b9a99ba89edd857e515377 408 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 9 405 5.9E-116 T 11-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 syc1220_c cdbd1ef201b9a99ba89edd857e515377 408 SUPERFAMILY SSF52507 7 184 2.62E-55 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 syc1220_c cdbd1ef201b9a99ba89edd857e515377 408 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 194 378 1.3E-53 T 11-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 syc1220_c cdbd1ef201b9a99ba89edd857e515377 408 Gene3D G3DSA:3.40.50.1950 5 189 7.6E-54 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 syc1220_c cdbd1ef201b9a99ba89edd857e515377 408 SUPERFAMILY SSF102645 193 407 5.1E-57 T 11-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 syc1220_c cdbd1ef201b9a99ba89edd857e515377 408 Gene3D G3DSA:3.40.50.10300 190 408 1.5E-57 T 11-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 syc0313_d fbc5f36d08d3664e04d662011bfbea4a 659 Gene3D G3DSA:3.40.50.300 2 283 9.7E-62 T 11-10-2018 syc0313_d fbc5f36d08d3664e04d662011bfbea4a 659 SMART SM00382 34 216 5.4E-19 T 11-10-2018 IPR003593 AAA+ ATPase domain syc0313_d fbc5f36d08d3664e04d662011bfbea4a 659 Pfam PF13379 NMT1-like family 275 523 1.6E-56 T 11-10-2018 syc0313_d fbc5f36d08d3664e04d662011bfbea4a 659 Gene3D G3DSA:3.40.190.10 368 476 1.7E-100 T 11-10-2018 syc0313_d fbc5f36d08d3664e04d662011bfbea4a 659 TIGRFAM TIGR01184 ntrCD: nitrate ABC transporter, ATP-binding proteins C and D 25 254 3.1E-131 T 11-10-2018 IPR005890 Nitrate transport ATP-binding subunit C/D GO:0015112|GO:0015706|GO:0016020 syc0313_d fbc5f36d08d3664e04d662011bfbea4a 659 SUPERFAMILY SSF53850 277 511 2.0E-26 T 11-10-2018 syc0313_d fbc5f36d08d3664e04d662011bfbea4a 659 Pfam PF00005 ABC transporter 25 166 2.8E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 syc0313_d fbc5f36d08d3664e04d662011bfbea4a 659 SUPERFAMILY SSF52540 5 231 1.26E-69 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0313_d fbc5f36d08d3664e04d662011bfbea4a 659 Gene3D G3DSA:3.40.190.10 284 633 1.7E-100 T 11-10-2018 syc0313_d fbc5f36d08d3664e04d662011bfbea4a 659 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 syc2079_d 9490fcc4ca296f313dc19877b0920b89 39 Gene3D G3DSA:1.20.5.510 1 39 2.8E-11 T 11-10-2018 syc2079_d 9490fcc4ca296f313dc19877b0920b89 39 Pfam PF06596 Photosystem II reaction centre X protein (PsbX) 1 39 4.2E-21 T 11-10-2018 IPR009518 Photosystem II PsbX GO:0009523|GO:0015979|GO:0016020 syc2079_d 9490fcc4ca296f313dc19877b0920b89 39 Hamap MF_01386 Photosystem II reaction center X protein [psbX]. 1 39 13.634 T 11-10-2018 IPR023431 Photosystem II PsbX, type 1 subfamily syc0921_d df905b014d296e6ba9f1dfd4839abba4 430 SUPERFAMILY SSF53448 3 390 6.1E-81 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases syc0921_d df905b014d296e6ba9f1dfd4839abba4 430 SUPERFAMILY SSF51161 292 430 8.04E-27 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily syc0921_d df905b014d296e6ba9f1dfd4839abba4 430 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 4 394 4.7E-144 T 11-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 syc0921_d df905b014d296e6ba9f1dfd4839abba4 430 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 209 219 - T 11-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 syc0921_d df905b014d296e6ba9f1dfd4839abba4 430 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 97 105 - T 11-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 syc0921_d df905b014d296e6ba9f1dfd4839abba4 430 Gene3D G3DSA:3.90.550.10 1 295 7.9E-101 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases syc0921_d df905b014d296e6ba9f1dfd4839abba4 430 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 1 424 41.318 T 11-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 syc0921_d df905b014d296e6ba9f1dfd4839abba4 430 Gene3D G3DSA:2.160.10.10 296 430 5.5E-50 T 11-10-2018 syc0921_d df905b014d296e6ba9f1dfd4839abba4 430 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 10 29 - T 11-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 syc0921_d df905b014d296e6ba9f1dfd4839abba4 430 Pfam PF00483 Nucleotidyl transferase 6 275 1.9E-72 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 syc0757_d d8a2acd032dca392fb06bc76ecd8ec5f 457 Pfam PF00069 Protein kinase domain 14 256 5.8E-41 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 syc0757_d d8a2acd032dca392fb06bc76ecd8ec5f 457 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 20 43 - T 11-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 syc0757_d d8a2acd032dca392fb06bc76ecd8ec5f 457 SMART SM00220 14 273 6.7E-40 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 syc0757_d d8a2acd032dca392fb06bc76ecd8ec5f 457 Gene3D G3DSA:3.30.200.20 3 100 7.8E-58 T 11-10-2018 syc0757_d d8a2acd032dca392fb06bc76ecd8ec5f 457 SUPERFAMILY SSF56112 6 263 1.6E-62 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily syc0757_d d8a2acd032dca392fb06bc76ecd8ec5f 457 Gene3D G3DSA:1.10.510.10 101 260 7.8E-58 T 11-10-2018 syc0109_c 7263b4b974ca4df2a35dbad99c5adf06 320 SUPERFAMILY SSF142754 16 318 2.62E-115 T 11-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 syc0109_c 7263b4b974ca4df2a35dbad99c5adf06 320 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 14 319 1.9E-120 T 11-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 syc0109_c 7263b4b974ca4df2a35dbad99c5adf06 320 Pfam PF02445 Quinolinate synthetase A protein 19 317 1.0E-117 T 11-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 syc0109_c 7263b4b974ca4df2a35dbad99c5adf06 320 Hamap MF_00568 Quinolinate synthase A [nadA]. 14 318 46.44 T 11-10-2018 IPR023066 Quinolinate synthase A, type 2 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 syc0109_c 7263b4b974ca4df2a35dbad99c5adf06 320 Gene3D G3DSA:3.40.50.10800 98 316 7.5E-113 T 11-10-2018 syc0109_c 7263b4b974ca4df2a35dbad99c5adf06 320 Gene3D G3DSA:3.40.50.10800 19 299 7.5E-113 T 11-10-2018 syc0109_c 7263b4b974ca4df2a35dbad99c5adf06 320 Gene3D G3DSA:3.40.50.10800 182 274 7.5E-113 T 11-10-2018 syc2471_c 16de20df2481d256aeb8c8d9b1917006 88 SUPERFAMILY SSF52833 1 81 4.68E-12 T 11-10-2018 IPR036249 Thioredoxin-like superfamily syc2471_c 16de20df2481d256aeb8c8d9b1917006 88 Pfam PF05768 Glutaredoxin-like domain (DUF836) 3 81 4.9E-17 T 11-10-2018 IPR008554 Glutaredoxin-like syc2471_c 16de20df2481d256aeb8c8d9b1917006 88 Gene3D G3DSA:3.40.30.10 1 73 1.8E-18 T 11-10-2018 syc1472_c b5dc41d770dce9a4ee44af404b8459b2 466 SUPERFAMILY SSF53474 124 391 1.05E-37 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold syc1472_c b5dc41d770dce9a4ee44af404b8459b2 466 Pfam PF07176 Alpha/beta hydrolase of unknown function (DUF1400) 3 90 5.2E-17 T 11-10-2018 IPR010802 Domain of unknown function DUF1400 syc1472_c b5dc41d770dce9a4ee44af404b8459b2 466 Pfam PF00561 alpha/beta hydrolase fold 171 286 5.8E-9 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 syc2171_d 4b6f75fa1fcad73d132753f1f6fcf81f 218 Pfam PF08281 Sigma-70, region 4 155 207 6.9E-16 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 syc2171_d 4b6f75fa1fcad73d132753f1f6fcf81f 218 SUPERFAMILY SSF88659 147 212 4.67E-18 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like syc2171_d 4b6f75fa1fcad73d132753f1f6fcf81f 218 Gene3D G3DSA:1.10.1740.10 22 134 2.4E-27 T 11-10-2018 syc2171_d 4b6f75fa1fcad73d132753f1f6fcf81f 218 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 44 211 8.6E-33 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 syc2171_d 4b6f75fa1fcad73d132753f1f6fcf81f 218 Pfam PF04542 Sigma-70 region 2 48 116 1.1E-17 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 syc2171_d 4b6f75fa1fcad73d132753f1f6fcf81f 218 SUPERFAMILY SSF88946 24 125 4.24E-27 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 syc2171_d 4b6f75fa1fcad73d132753f1f6fcf81f 218 Gene3D G3DSA:1.10.10.10 152 213 4.4E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily syc0859_c f860dd6ddeb1eb91fcdaad82549a18b6 338 Gene3D G3DSA:3.40.50.1370 142 316 4.2E-84 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 syc0859_c f860dd6ddeb1eb91fcdaad82549a18b6 338 SUPERFAMILY SSF53671 3 328 1.19E-85 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 syc0859_c f860dd6ddeb1eb91fcdaad82549a18b6 338 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 6 331 40.186 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 syc0859_c f860dd6ddeb1eb91fcdaad82549a18b6 338 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 169 327 1.4E-27 T 11-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 syc0859_c f860dd6ddeb1eb91fcdaad82549a18b6 338 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 7 329 1.2E-102 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 syc0859_c f860dd6ddeb1eb91fcdaad82549a18b6 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 281 290 1.8E-12 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 syc0859_c f860dd6ddeb1eb91fcdaad82549a18b6 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 1.8E-12 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 syc0859_c f860dd6ddeb1eb91fcdaad82549a18b6 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 142 153 1.8E-12 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 syc0859_c f860dd6ddeb1eb91fcdaad82549a18b6 338 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 7 153 2.3E-40 T 11-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 syc0859_c f860dd6ddeb1eb91fcdaad82549a18b6 338 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 syc0859_c f860dd6ddeb1eb91fcdaad82549a18b6 338 Gene3D G3DSA:3.40.50.1370 7 327 4.2E-84 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 syc0859_c f860dd6ddeb1eb91fcdaad82549a18b6 338 PRINTS PR00101 Aspartate carbamoyltransferase signature 285 290 3.9E-30 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 syc0859_c f860dd6ddeb1eb91fcdaad82549a18b6 338 PRINTS PR00101 Aspartate carbamoyltransferase signature 310 324 3.9E-30 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 syc0859_c f860dd6ddeb1eb91fcdaad82549a18b6 338 PRINTS PR00101 Aspartate carbamoyltransferase signature 244 253 3.9E-30 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 syc0859_c f860dd6ddeb1eb91fcdaad82549a18b6 338 PRINTS PR00101 Aspartate carbamoyltransferase signature 43 65 3.9E-30 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 syc0859_c f860dd6ddeb1eb91fcdaad82549a18b6 338 PRINTS PR00101 Aspartate carbamoyltransferase signature 141 158 3.9E-30 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 syc0859_c f860dd6ddeb1eb91fcdaad82549a18b6 338 PRINTS PR00101 Aspartate carbamoyltransferase signature 81 90 3.9E-30 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 syc2274_d 946082ddaab8b6d612d8d0562d44db13 264 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 46 255 6.1E-27 T 11-10-2018 IPR006214 Bax inhibitor 1-related syc2448_d d2647d7f01e7124bced867c19b42452d 352 TIGRFAM TIGR01152 psbD: photosystem II D2 protein (photosystem q(a) protein) 1 352 9.9E-235 T 11-10-2018 IPR005868 Photosystem II D2 protein GO:0009523|GO:0015979|GO:0016020|GO:0019684|GO:0045156 MetaCyc: PWY-101 syc2448_d d2647d7f01e7124bced867c19b42452d 352 PRINTS PR00256 Bacterial photosynthetic reaction centre signature 141 163 1.4E-9 T 11-10-2018 IPR000484 Photosynthetic reaction centre, L/M GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 syc2448_d d2647d7f01e7124bced867c19b42452d 352 PRINTS PR00256 Bacterial photosynthetic reaction centre signature 108 136 1.4E-9 T 11-10-2018 IPR000484 Photosynthetic reaction centre, L/M GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 syc2448_d d2647d7f01e7124bced867c19b42452d 352 PRINTS PR00256 Bacterial photosynthetic reaction centre signature 196 222 1.4E-9 T 11-10-2018 IPR000484 Photosynthetic reaction centre, L/M GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 syc2448_d d2647d7f01e7124bced867c19b42452d 352 ProSitePatterns PS00244 Photosynthetic reaction center proteins signature. 190 216 - T 11-10-2018 IPR000484 Photosynthetic reaction centre, L/M GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 syc2448_d d2647d7f01e7124bced867c19b42452d 352 Gene3D G3DSA:1.20.85.10 141 297 5.2E-21 T 11-10-2018 IPR036854 Photosystem II protein D1/D2 superfamily GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 syc2448_d d2647d7f01e7124bced867c19b42452d 352 Hamap MF_01383 Photosystem II D2 protein [psbD]. 1 352 62.332 T 11-10-2018 IPR005868 Photosystem II D2 protein GO:0009523|GO:0015979|GO:0016020|GO:0019684|GO:0045156 MetaCyc: PWY-101 syc2448_d d2647d7f01e7124bced867c19b42452d 352 Pfam PF00124 Photosynthetic reaction centre protein 28 317 2.6E-74 T 11-10-2018 IPR000484 Photosynthetic reaction centre, L/M GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 syc2448_d d2647d7f01e7124bced867c19b42452d 352 SUPERFAMILY SSF81483 13 351 1.09E-126 T 11-10-2018 IPR036854 Photosystem II protein D1/D2 superfamily GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 syc0514_c 04d298b3eda46883daab0562ad53665e 318 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 1 311 1.2E-104 T 11-10-2018 IPR007296 Domain of unknown function DUF403 syc0204_d 4bf6c4009137a71b8c298d2b4b957a5d 266 Pfam PF13419 Haloacid dehalogenase-like hydrolase 41 222 2.4E-25 T 11-10-2018 syc0204_d 4bf6c4009137a71b8c298d2b4b957a5d 266 Gene3D G3DSA:1.10.150.240 52 119 4.4E-65 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 syc0204_d 4bf6c4009137a71b8c298d2b4b957a5d 266 Gene3D G3DSA:3.40.50.1000 41 242 4.4E-65 T 11-10-2018 IPR023214 HAD superfamily syc0204_d 4bf6c4009137a71b8c298d2b4b957a5d 266 SUPERFAMILY SSF56784 37 247 1.39E-49 T 11-10-2018 IPR036412 HAD-like superfamily syc0204_d 4bf6c4009137a71b8c298d2b4b957a5d 266 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 116 222 2.2E-15 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 syc1825_c 0ed754a2afe9cc7d4bab1843d47308f5 677 SUPERFAMILY SSF53300 482 657 7.42E-23 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily syc1825_c 0ed754a2afe9cc7d4bab1843d47308f5 677 Gene3D G3DSA:1.10.8.80 257 331 6.6E-12 T 11-10-2018 syc1825_c 0ed754a2afe9cc7d4bab1843d47308f5 677 SMART SM00382 34 212 2.8E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain syc1825_c 0ed754a2afe9cc7d4bab1843d47308f5 677 SUPERFAMILY SSF52540 11 322 7.0E-52 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc1825_c 0ed754a2afe9cc7d4bab1843d47308f5 677 Gene3D G3DSA:3.40.50.410 482 669 1.0E-19 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily syc1825_c 0ed754a2afe9cc7d4bab1843d47308f5 677 Pfam PF13519 von Willebrand factor type A domain 482 587 1.9E-14 T 11-10-2018 IPR002035 von Willebrand factor, type A syc1825_c 0ed754a2afe9cc7d4bab1843d47308f5 677 Pfam PF01078 Magnesium chelatase, subunit ChlI 15 192 1.4E-10 T 11-10-2018 IPR000523 Magnesium chelatase ChlI domain syc1825_c 0ed754a2afe9cc7d4bab1843d47308f5 677 Gene3D G3DSA:3.40.50.300 9 211 3.5E-55 T 11-10-2018 syc1825_c 0ed754a2afe9cc7d4bab1843d47308f5 677 TIGRFAM TIGR02031 BchD-ChlD: magnesium chelatase ATPase subunit D 22 665 4.8E-235 T 11-10-2018 IPR011776 Magnesium chelatase, ATPase subunit D GO:0005524|GO:0015995|GO:0016851 KEGG: 00860+6.6.1.1|MetaCyc: PWY-5531|MetaCyc: PWY-7159 syc1825_c 0ed754a2afe9cc7d4bab1843d47308f5 677 SMART SM00327 479 674 3.4E-29 T 11-10-2018 IPR002035 von Willebrand factor, type A syc1379_d 78a8a4e232b72d9d440d0f675564140c 209 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 45 188 7.5E-62 T 11-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 syc1379_d 78a8a4e232b72d9d440d0f675564140c 209 Gene3D G3DSA:3.30.230.40 104 209 5.9E-39 T 11-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 syc1379_d 78a8a4e232b72d9d440d0f675564140c 209 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 75 88 - T 11-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 syc1379_d 78a8a4e232b72d9d440d0f675564140c 209 Gene3D G3DSA:3.30.230.40 6 103 2.5E-37 T 11-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 syc1379_d 78a8a4e232b72d9d440d0f675564140c 209 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 170 182 - T 11-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 syc1379_d 78a8a4e232b72d9d440d0f675564140c 209 SUPERFAMILY SSF54211 16 100 1.77E-32 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold syc1379_d 78a8a4e232b72d9d440d0f675564140c 209 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 16 209 42.353 T 11-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 syc1379_d 78a8a4e232b72d9d440d0f675564140c 209 SUPERFAMILY SSF54211 101 193 2.43E-33 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold syc2402_c 6006ab6577d5bc0a6ae3d80cfe5b6def 286 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 17 275 4.2E-94 T 11-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 syc2402_c 6006ab6577d5bc0a6ae3d80cfe5b6def 286 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 20 276 1.3E-104 T 11-10-2018 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 syc2402_c 6006ab6577d5bc0a6ae3d80cfe5b6def 286 Gene3D G3DSA:1.10.3720.10 20 280 9.5E-60 T 11-10-2018 IPR035906 MetI-like superfamily syc2402_c 6006ab6577d5bc0a6ae3d80cfe5b6def 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 82 274 2.6E-17 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 syc2402_c 6006ab6577d5bc0a6ae3d80cfe5b6def 286 SUPERFAMILY SSF161098 16 274 5.89E-53 T 11-10-2018 IPR035906 MetI-like superfamily syc1588_d fe6adc0c02bc9cf224c94a246fada8f3 837 Pfam PF05231 MASE1 1 230 4.2E-23 T 11-10-2018 IPR007895 MASE1 syc1588_d fe6adc0c02bc9cf224c94a246fada8f3 837 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 398 553 5.9E-35 T 11-10-2018 IPR000160 GGDEF domain syc1588_d fe6adc0c02bc9cf224c94a246fada8f3 837 Gene3D G3DSA:3.30.70.270 394 574 2.4E-51 T 11-10-2018 syc1588_d fe6adc0c02bc9cf224c94a246fada8f3 837 SUPERFAMILY SSF141868 578 828 4.18E-87 T 11-10-2018 IPR035919 EAL domain superfamily syc1588_d fe6adc0c02bc9cf224c94a246fada8f3 837 SMART SM00267 389 561 1.2E-51 T 11-10-2018 IPR000160 GGDEF domain syc1588_d fe6adc0c02bc9cf224c94a246fada8f3 837 Pfam PF00563 EAL domain 578 817 1.3E-78 T 11-10-2018 IPR001633 EAL domain syc1588_d fe6adc0c02bc9cf224c94a246fada8f3 837 SUPERFAMILY SSF55073 405 554 7.85E-44 T 11-10-2018 IPR029787 Nucleotide cyclase syc1588_d fe6adc0c02bc9cf224c94a246fada8f3 837 SMART SM00052 572 822 7.1E-111 T 11-10-2018 IPR001633 EAL domain syc1588_d fe6adc0c02bc9cf224c94a246fada8f3 837 Gene3D G3DSA:3.30.450.20 224 368 2.0E-11 T 11-10-2018 syc1588_d fe6adc0c02bc9cf224c94a246fada8f3 837 Gene3D G3DSA:3.20.20.450 575 835 6.1E-96 T 11-10-2018 IPR035919 EAL domain superfamily syc1588_d fe6adc0c02bc9cf224c94a246fada8f3 837 Pfam PF00990 Diguanylate cyclase, GGDEF domain 400 553 4.2E-42 T 11-10-2018 IPR000160 GGDEF domain syc1588_d fe6adc0c02bc9cf224c94a246fada8f3 837 SUPERFAMILY SSF55785 229 351 8.2E-9 T 11-10-2018 IPR035965 PAS domain superfamily syc1510_d f3fbdcb2c29b0b3dae5669e52ff5b925 318 Gene3D G3DSA:1.10.357.140 26 183 1.0E-20 T 11-10-2018 syc1510_d f3fbdcb2c29b0b3dae5669e52ff5b925 318 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 19 302 19.304 T 11-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 syc1510_d f3fbdcb2c29b0b3dae5669e52ff5b925 318 Pfam PF01040 UbiA prenyltransferase family 35 286 1.7E-68 T 11-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 syc1510_d f3fbdcb2c29b0b3dae5669e52ff5b925 318 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 74 96 - T 11-10-2018 IPR030470 UbiA prenyltransferase conserved site syc1510_d f3fbdcb2c29b0b3dae5669e52ff5b925 318 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 22 299 1.3E-97 T 11-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 syc0039_c 0d0de5c9ca00fe33f1ebf72ba4a0d29c 482 Pfam PF10396 GTP-binding protein TrmE N-terminus 28 148 1.5E-36 T 11-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 syc0039_c 0d0de5c9ca00fe33f1ebf72ba4a0d29c 482 Pfam PF12631 MnmE helical domain 151 479 1.4E-55 T 11-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 syc0039_c 0d0de5c9ca00fe33f1ebf72ba4a0d29c 482 Gene3D G3DSA:3.40.50.300 244 410 1.7E-104 T 11-10-2018 syc0039_c 0d0de5c9ca00fe33f1ebf72ba4a0d29c 482 Gene3D G3DSA:1.20.120.430 149 482 1.7E-104 T 11-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 syc0039_c 0d0de5c9ca00fe33f1ebf72ba4a0d29c 482 SUPERFAMILY SSF116878 149 482 2.22E-46 T 11-10-2018 syc0039_c 0d0de5c9ca00fe33f1ebf72ba4a0d29c 482 Pfam PF01926 50S ribosome-binding GTPase 245 358 1.5E-24 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 syc0039_c 0d0de5c9ca00fe33f1ebf72ba4a0d29c 482 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 244 394 1.7E-24 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 syc0039_c 0d0de5c9ca00fe33f1ebf72ba4a0d29c 482 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 35 482 2.3E-145 T 11-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 syc0039_c 0d0de5c9ca00fe33f1ebf72ba4a0d29c 482 Gene3D G3DSA:3.30.1360.120 22 148 7.0E-49 T 11-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 syc0039_c 0d0de5c9ca00fe33f1ebf72ba4a0d29c 482 SUPERFAMILY SSF52540 101 398 3.45E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0039_c 0d0de5c9ca00fe33f1ebf72ba4a0d29c 482 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 27 482 32.572 T 11-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 syc1370_d a323c91214db596518807c5b959d54d9 211 Gene3D G3DSA:3.40.50.150 17 206 9.4E-32 T 11-10-2018 syc1370_d a323c91214db596518807c5b959d54d9 211 SUPERFAMILY SSF53335 11 207 1.82E-32 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase syc1370_d a323c91214db596518807c5b959d54d9 211 Pfam PF13649 Methyltransferase domain 49 139 7.6E-21 T 11-10-2018 syc0778_c 4bd62f7539acb723db97bcbece8d1b93 192 Pfam PF08291 Peptidase M15 73 183 1.5E-31 T 11-10-2018 IPR013230 Peptidase M15A, C-terminal KEGG: 00550+3.4.17.14|MetaCyc: PWY-6470 syc0778_c 4bd62f7539acb723db97bcbece8d1b93 192 SUPERFAMILY SSF55166 74 192 2.39E-21 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 syc0778_c 4bd62f7539acb723db97bcbece8d1b93 192 Gene3D G3DSA:3.30.1380.10 74 192 1.2E-19 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 syc1731_c 2b7083e1fa1a727ebb86a2c5245baccb 452 Pfam PF01938 TRAM domain 382 445 5.9E-13 T 11-10-2018 IPR002792 TRAM domain syc1731_c 2b7083e1fa1a727ebb86a2c5245baccb 452 SMART SM00729 146 371 2.3E-62 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 syc1731_c 2b7083e1fa1a727ebb86a2c5245baccb 452 Gene3D G3DSA:3.40.50.12160 5 139 8.8E-37 T 11-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily syc1731_c 2b7083e1fa1a727ebb86a2c5245baccb 452 Pfam PF04055 Radical SAM superfamily 150 329 1.9E-28 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 syc1731_c 2b7083e1fa1a727ebb86a2c5245baccb 452 Gene3D G3DSA:3.80.30.20 144 385 2.6E-87 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe syc1731_c 2b7083e1fa1a727ebb86a2c5245baccb 452 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 150 170 - T 11-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 syc1731_c 2b7083e1fa1a727ebb86a2c5245baccb 452 Pfam PF00919 Uncharacterized protein family UPF0004 6 105 2.1E-30 T 11-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 syc1731_c 2b7083e1fa1a727ebb86a2c5245baccb 452 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 6 442 9.5E-155 T 11-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 syc1731_c 2b7083e1fa1a727ebb86a2c5245baccb 452 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 6 444 2.6E-143 T 11-10-2018 syc1731_c 2b7083e1fa1a727ebb86a2c5245baccb 452 SUPERFAMILY SSF102114 141 375 1.22E-60 T 11-10-2018 syc1731_c 2b7083e1fa1a727ebb86a2c5245baccb 452 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 5 446 68.163 T 11-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 syc0768_c 4fc8b6c83c4cfdbfce0713e7129a5ff9 262 Pfam PF05019 Coenzyme Q (ubiquinone) biosynthesis protein Coq4 91 261 2.6E-21 T 11-10-2018 IPR007715 Ubiquinone biosynthesis protein Coq4 GO:0006744 syc0283_d 39c46da58708c0ae02dc4b13773252af 484 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 419 472 1.4E-12 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 syc0283_d 39c46da58708c0ae02dc4b13773252af 484 SUPERFAMILY SSF53738 167 275 2.75E-22 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 syc0283_d 39c46da58708c0ae02dc4b13773252af 484 Gene3D G3DSA:3.30.310.50 393 482 5.8E-23 T 11-10-2018 syc0283_d 39c46da58708c0ae02dc4b13773252af 484 SUPERFAMILY SSF55957 394 481 2.88E-23 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 syc0283_d 39c46da58708c0ae02dc4b13773252af 484 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 169 273 7.8E-18 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 syc0283_d 39c46da58708c0ae02dc4b13773252af 484 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 108 122 1.0E-13 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 syc0283_d 39c46da58708c0ae02dc4b13773252af 484 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 191 210 1.0E-13 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 syc0283_d 39c46da58708c0ae02dc4b13773252af 484 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 222 235 1.0E-13 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 syc0283_d 39c46da58708c0ae02dc4b13773252af 484 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 253 268 1.0E-13 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 syc0283_d 39c46da58708c0ae02dc4b13773252af 484 Gene3D G3DSA:3.40.120.10 4 179 3.8E-41 T 11-10-2018 syc0283_d 39c46da58708c0ae02dc4b13773252af 484 Gene3D G3DSA:3.40.120.10 274 391 1.4E-32 T 11-10-2018 syc0283_d 39c46da58708c0ae02dc4b13773252af 484 SUPERFAMILY SSF53738 261 388 2.12E-27 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 syc0283_d 39c46da58708c0ae02dc4b13773252af 484 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 109 118 - T 11-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 syc0283_d 39c46da58708c0ae02dc4b13773252af 484 Gene3D G3DSA:3.40.120.10 193 273 9.1E-18 T 11-10-2018 syc0283_d 39c46da58708c0ae02dc4b13773252af 484 SUPERFAMILY SSF53738 6 195 7.85E-39 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 syc0283_d 39c46da58708c0ae02dc4b13773252af 484 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 282 386 4.6E-22 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 syc0283_d 39c46da58708c0ae02dc4b13773252af 484 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 15 148 1.9E-31 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 syc0955_d 3cee4862a43a2b5a98a7448fc509a7c4 449 Pfam PF01565 FAD binding domain 47 176 6.0E-25 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 syc0955_d 3cee4862a43a2b5a98a7448fc509a7c4 449 Gene3D G3DSA:3.30.465.40 22 230 3.4E-30 T 11-10-2018 syc0955_d 3cee4862a43a2b5a98a7448fc509a7c4 449 SUPERFAMILY SSF55103 220 445 2.18E-9 T 11-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 syc0955_d 3cee4862a43a2b5a98a7448fc509a7c4 449 SUPERFAMILY SSF56176 17 214 7.01E-33 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 syc1345_c a360f87734eaea0748d1a5aec6ba74b1 180 Gene3D G3DSA:2.40.128.20 10 179 2.7E-42 T 11-10-2018 IPR012674 Calycin syc1345_c a360f87734eaea0748d1a5aec6ba74b1 180 Hamap MF_01459 Chromophore lyase CpcS/CpeS [cpcS]. 13 169 20.505 T 11-10-2018 IPR018536 Chromophore lyase CpcS/CpeS GO:0017009 syc1345_c a360f87734eaea0748d1a5aec6ba74b1 180 Pfam PF09367 CpeS-like protein 16 168 2.9E-26 T 11-10-2018 IPR018536 Chromophore lyase CpcS/CpeS GO:0017009 syc0608_c fdefe8e3768ff032c19b16123019369a 353 Pfam PF02885 Glycosyl transferase family, helical bundle domain 7 67 6.8E-12 T 11-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 syc0608_c fdefe8e3768ff032c19b16123019369a 353 Pfam PF00591 Glycosyl transferase family, a/b domain 104 330 2.3E-8 T 11-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 syc0608_c fdefe8e3768ff032c19b16123019369a 353 SUPERFAMILY SSF52418 83 343 1.23E-47 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 syc0608_c fdefe8e3768ff032c19b16123019369a 353 SUPERFAMILY SSF47648 9 72 6.93E-13 T 11-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 syc0608_c fdefe8e3768ff032c19b16123019369a 353 Gene3D G3DSA:1.20.970.10 4 71 2.7E-15 T 11-10-2018 syc0608_c fdefe8e3768ff032c19b16123019369a 353 Gene3D G3DSA:3.40.1030.10 86 347 4.8E-41 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 syc0990_c 8dd39e1e8cbe7bbe1591b70fe202d572 287 Gene3D G3DSA:1.25.40.10 5 281 5.7E-42 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc0990_c 8dd39e1e8cbe7bbe1591b70fe202d572 287 SMART SM00028 178 211 7.6E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc0990_c 8dd39e1e8cbe7bbe1591b70fe202d572 287 SMART SM00028 212 245 32.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc0990_c 8dd39e1e8cbe7bbe1591b70fe202d572 287 SMART SM00028 110 143 0.013 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc0990_c 8dd39e1e8cbe7bbe1591b70fe202d572 287 SMART SM00028 76 109 0.6 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc0990_c 8dd39e1e8cbe7bbe1591b70fe202d572 287 SMART SM00028 144 177 1.6E-5 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc0990_c 8dd39e1e8cbe7bbe1591b70fe202d572 287 Pfam PF13432 Tetratricopeptide repeat 114 176 1.3E-10 T 11-10-2018 syc0990_c 8dd39e1e8cbe7bbe1591b70fe202d572 287 SUPERFAMILY SSF48452 46 253 1.39E-33 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc0990_c 8dd39e1e8cbe7bbe1591b70fe202d572 287 Pfam PF09295 ChAPs (Chs5p-Arf1p-binding proteins) 44 100 1.5E-4 T 11-10-2018 IPR015374 Chs5p-Arf1p binding syc0990_c 8dd39e1e8cbe7bbe1591b70fe202d572 287 Pfam PF07719 Tetratricopeptide repeat 179 210 2.5E-5 T 11-10-2018 IPR013105 Tetratricopeptide repeat 2 syc2072_d c4d24d98a43662ced950f0b755b07214 153 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 7 153 16.985 T 11-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 syc2072_d c4d24d98a43662ced950f0b755b07214 153 Gene3D G3DSA:3.30.300.70 3 82 6.2E-12 T 11-10-2018 IPR035956 RimP, N-terminal domain superfamily syc2072_d c4d24d98a43662ced950f0b755b07214 153 Pfam PF02576 RimP N-terminal domain 13 84 9.3E-12 T 11-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal syc2072_d c4d24d98a43662ced950f0b755b07214 153 SUPERFAMILY SSF75420 2 84 1.7E-17 T 11-10-2018 IPR035956 RimP, N-terminal domain superfamily syc2072_d c4d24d98a43662ced950f0b755b07214 153 SUPERFAMILY SSF74942 88 151 1.24E-8 T 11-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily syc2490_c 0024eaa2d13f35de26cd43b29a355bf7 383 SMART SM01329 24 373 9.4E-204 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 syc2490_c 0024eaa2d13f35de26cd43b29a355bf7 383 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 24 372 3.3E-158 T 11-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 syc2490_c 0024eaa2d13f35de26cd43b29a355bf7 383 SUPERFAMILY SSF53659 22 377 4.07E-120 T 11-10-2018 syc2490_c 0024eaa2d13f35de26cd43b29a355bf7 383 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 25 372 1.7E-134 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 syc2490_c 0024eaa2d13f35de26cd43b29a355bf7 383 Gene3D G3DSA:3.40.718.10 21 383 3.2E-147 T 11-10-2018 syc2490_c 0024eaa2d13f35de26cd43b29a355bf7 383 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 23 377 51.093 T 11-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 syc2490_c 0024eaa2d13f35de26cd43b29a355bf7 383 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 264 283 - T 11-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 syc0729_c a079cb044ee29578f486d7adb479ab87 533 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 36 191 2.8E-23 T 11-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like syc1107_d 759ab9fe037435cb3d06641d38fa2f70 90 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 6 86 1.4E-8 T 11-10-2018 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system syc0556_d fcca075bb06f19c5e837299b24b93757 108 Gene3D G3DSA:3.30.70.1860 1 108 1.3E-46 T 11-10-2018 IPR038409 Ycf54-like superfamily syc0556_d fcca075bb06f19c5e837299b24b93757 108 Pfam PF10674 Protein of unknown function (DUF2488) 3 93 6.7E-45 T 11-10-2018 IPR019616 Uncharacterised protein family Ycf54 syc2136_c 66210218427b43060d850442b61dfeb1 600 PRINTS PR01046 Prolyl-tRNA synthetase signature 107 118 1.0E-18 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 syc2136_c 66210218427b43060d850442b61dfeb1 600 PRINTS PR01046 Prolyl-tRNA synthetase signature 147 158 1.0E-18 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 syc2136_c 66210218427b43060d850442b61dfeb1 600 PRINTS PR01046 Prolyl-tRNA synthetase signature 137 145 1.0E-18 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 syc2136_c 66210218427b43060d850442b61dfeb1 600 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 1.0E-18 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 syc2136_c 66210218427b43060d850442b61dfeb1 600 SUPERFAMILY SSF52954 491 595 1.66E-29 T 11-10-2018 syc2136_c 66210218427b43060d850442b61dfeb1 600 Gene3D G3DSA:3.90.960.10 243 415 3.5E-232 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 syc2136_c 66210218427b43060d850442b61dfeb1 600 SUPERFAMILY SSF55681 10 505 4.79E-98 T 11-10-2018 syc2136_c 66210218427b43060d850442b61dfeb1 600 Pfam PF04073 Aminoacyl-tRNA editing domain 259 402 5.0E-10 T 11-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 syc2136_c 66210218427b43060d850442b61dfeb1 600 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 593 2.8E-229 T 11-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 syc2136_c 66210218427b43060d850442b61dfeb1 600 Gene3D G3DSA:3.40.50.800 4 579 3.5E-232 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily syc2136_c 66210218427b43060d850442b61dfeb1 600 Gene3D G3DSA:3.30.930.10 11 492 3.5E-232 T 11-10-2018 syc2136_c 66210218427b43060d850442b61dfeb1 600 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 596 38.982 T 11-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 syc2136_c 66210218427b43060d850442b61dfeb1 600 Pfam PF03129 Anticodon binding domain 502 593 6.5E-19 T 11-10-2018 IPR004154 Anticodon-binding syc2136_c 66210218427b43060d850442b61dfeb1 600 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 97 485 1.0E-47 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 syc2136_c 66210218427b43060d850442b61dfeb1 600 SUPERFAMILY SSF55826 226 414 2.22E-10 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 syc1815_d 96cfe33cf7cfe8094fb457518b8e3195 359 Gene3D G3DSA:3.40.50.1970 1 149 1.7E-30 T 11-10-2018 syc1815_d 96cfe33cf7cfe8094fb457518b8e3195 359 PIRSF PIRSF000112 1 351 5.4E-104 T 11-10-2018 IPR016205 Glycerol dehydrogenase GO:0016614|GO:0046872|GO:0055114 KEGG: 00564+1.1.1.261|MetaCyc: PWY-6349 syc1815_d 96cfe33cf7cfe8094fb457518b8e3195 359 Gene3D G3DSA:1.20.1090.10 150 353 1.2E-55 T 11-10-2018 syc1815_d 96cfe33cf7cfe8094fb457518b8e3195 359 Pfam PF00465 Iron-containing alcohol dehydrogenase 2 338 8.2E-56 T 11-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 syc1815_d 96cfe33cf7cfe8094fb457518b8e3195 359 SUPERFAMILY SSF56796 2 345 5.1E-74 T 11-10-2018 syc1815_d 96cfe33cf7cfe8094fb457518b8e3195 359 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 140 168 - T 11-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 syc2233_d 2b0c06a12a075f39834edf7acf1d4345 421 SUPERFAMILY SSF53822 35 415 1.98E-75 T 11-10-2018 IPR028082 Periplasmic binding protein-like I syc2233_d 2b0c06a12a075f39834edf7acf1d4345 421 Gene3D G3DSA:3.40.50.2300 38 357 6.3E-76 T 11-10-2018 syc2233_d 2b0c06a12a075f39834edf7acf1d4345 421 Gene3D G3DSA:3.40.50.2300 158 301 6.3E-76 T 11-10-2018 syc2233_d 2b0c06a12a075f39834edf7acf1d4345 421 Pfam PF13458 Periplasmic binding protein 35 352 2.4E-47 T 11-10-2018 IPR028081 Leucine-binding protein domain syc2233_d 2b0c06a12a075f39834edf7acf1d4345 421 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 76 94 2.6E-6 T 11-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 syc2233_d 2b0c06a12a075f39834edf7acf1d4345 421 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 35 51 2.6E-6 T 11-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 syc2233_d 2b0c06a12a075f39834edf7acf1d4345 421 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 57 73 2.6E-6 T 11-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 syc2233_d 2b0c06a12a075f39834edf7acf1d4345 421 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 274 292 2.6E-6 T 11-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 syc1980_d 30e1137a9746875ac594726e2db206b8 180 SUPERFAMILY SSF52540 1 146 9.57E-19 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc1980_d 30e1137a9746875ac594726e2db206b8 180 Gene3D G3DSA:3.40.50.300 32 162 2.0E-14 T 11-10-2018 syc1980_d 30e1137a9746875ac594726e2db206b8 180 Pfam PF13500 AAA domain 50 145 8.6E-14 T 11-10-2018 syc2036_c 37124d94abad5a518c1b306db9338aa4 210 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 5 204 2.3E-54 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 syc2036_c 37124d94abad5a518c1b306db9338aa4 210 SMART SM01207 10 195 9.5E-76 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 syc2036_c 37124d94abad5a518c1b306db9338aa4 210 Pfam PF02660 Glycerol-3-phosphate acyltransferase 11 194 8.1E-50 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 syc2036_c 37124d94abad5a518c1b306db9338aa4 210 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 7 203 20.674 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 syc0032_d 5603d9af8aeafc3f2d222740fa26cb5f 681 Pfam PF12439 Glycogen debranching enzyme N terminal 19 237 2.7E-72 T 11-10-2018 IPR024742 Glycogen debranching enzyme, bacterial and archaeal type, N-terminal syc0032_d 5603d9af8aeafc3f2d222740fa26cb5f 681 Gene3D G3DSA:1.50.10.10 317 660 1.1E-41 T 11-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 syc0032_d 5603d9af8aeafc3f2d222740fa26cb5f 681 Pfam PF06202 Amylo-alpha-1,6-glucosidase 290 661 5.3E-140 T 11-10-2018 IPR032790 Glycogen debranching enzyme, C-terminal KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-6798695|Reactome: R-HSA-70221 syc0032_d 5603d9af8aeafc3f2d222740fa26cb5f 681 TIGRFAM TIGR01561 gde_arch: putative glycogen debranching enzyme, archaeal type 20 602 6.5E-111 T 11-10-2018 IPR006451 Glycogen debranching enzyme, archaeal type syc0032_d 5603d9af8aeafc3f2d222740fa26cb5f 681 SUPERFAMILY SSF48208 185 663 6.35E-85 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 syc2483_c 1618bc45225e0b0704921b24b44d8ce5 186 Pfam PF11016 Protein of unknown function (DUF2854) 20 165 6.5E-65 T 11-10-2018 IPR021275 Protein of unknown function DUF2854 syc1608_d b1d269ee49de37f91c926e979ce4b4fd 414 Pfam PF01145 SPFH domain / Band 7 family 30 216 5.7E-20 T 11-10-2018 IPR001107 Band 7 domain syc1608_d b1d269ee49de37f91c926e979ce4b4fd 414 Gene3D G3DSA:3.30.479.30 73 189 6.0E-31 T 11-10-2018 syc1608_d b1d269ee49de37f91c926e979ce4b4fd 414 SUPERFAMILY SSF117892 64 206 5.36E-28 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily syc1608_d b1d269ee49de37f91c926e979ce4b4fd 414 SMART SM00244 25 199 1.2E-25 T 11-10-2018 IPR001107 Band 7 domain syc1209_c 25ed1d6e2edadf3b5d5d574f7fbbb1c9 362 Pfam PF07885 Ion channel 24 96 2.2E-13 T 11-10-2018 IPR013099 Potassium channel domain syc1209_c 25ed1d6e2edadf3b5d5d574f7fbbb1c9 362 SUPERFAMILY SSF51735 116 258 3.95E-39 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily syc1209_c 25ed1d6e2edadf3b5d5d574f7fbbb1c9 362 Pfam PF02254 TrkA-N domain 120 235 1.3E-33 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 syc1209_c 25ed1d6e2edadf3b5d5d574f7fbbb1c9 362 Gene3D G3DSA:3.40.50.720 120 272 2.7E-39 T 11-10-2018 syc1209_c 25ed1d6e2edadf3b5d5d574f7fbbb1c9 362 Pfam PF02080 TrkA-C domain 278 345 2.4E-11 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 syc1209_c 25ed1d6e2edadf3b5d5d574f7fbbb1c9 362 SUPERFAMILY SSF116726 263 347 3.79E-15 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 syc1209_c 25ed1d6e2edadf3b5d5d574f7fbbb1c9 362 Gene3D G3DSA:1.10.287.70 8 119 2.0E-14 T 11-10-2018 syc1209_c 25ed1d6e2edadf3b5d5d574f7fbbb1c9 362 SUPERFAMILY SSF81324 18 138 2.88E-17 T 11-10-2018 syc1209_c 25ed1d6e2edadf3b5d5d574f7fbbb1c9 362 Gene3D G3DSA:3.30.70.1450 273 351 4.9E-16 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 syc0538_d c403aaaab808b965c28c67a26f464b87 463 PRINTS PR00149 Fumarate lyase superfamily signature 183 201 2.2E-34 T 11-10-2018 IPR000362 Fumarate lyase family syc0538_d c403aaaab808b965c28c67a26f464b87 463 PRINTS PR00149 Fumarate lyase superfamily signature 274 301 2.2E-34 T 11-10-2018 IPR000362 Fumarate lyase family syc0538_d c403aaaab808b965c28c67a26f464b87 463 PRINTS PR00149 Fumarate lyase superfamily signature 320 336 2.2E-34 T 11-10-2018 IPR000362 Fumarate lyase family syc0538_d c403aaaab808b965c28c67a26f464b87 463 PRINTS PR00149 Fumarate lyase superfamily signature 137 155 2.2E-34 T 11-10-2018 IPR000362 Fumarate lyase family syc0538_d c403aaaab808b965c28c67a26f464b87 463 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 8 463 4.9E-221 T 11-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 syc0538_d c403aaaab808b965c28c67a26f464b87 463 Pfam PF10415 Fumarase C C-terminus 411 463 3.5E-21 T 11-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 syc0538_d c403aaaab808b965c28c67a26f464b87 463 SUPERFAMILY SSF48557 7 462 2.36E-155 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 syc0538_d c403aaaab808b965c28c67a26f464b87 463 Gene3D G3DSA:1.10.275.10 8 141 7.9E-55 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal syc0538_d c403aaaab808b965c28c67a26f464b87 463 Hamap MF_00743 Fumarate hydratase class II [fumC]. 7 463 86.017 T 11-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 syc0538_d c403aaaab808b965c28c67a26f464b87 463 Gene3D G3DSA:1.20.200.10 142 410 4.2E-113 T 11-10-2018 syc0538_d c403aaaab808b965c28c67a26f464b87 463 Pfam PF00206 Lyase 15 345 2.5E-108 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal syc0538_d c403aaaab808b965c28c67a26f464b87 463 Gene3D G3DSA:1.10.40.30 411 463 5.7E-24 T 11-10-2018 syc0538_d c403aaaab808b965c28c67a26f464b87 463 ProSitePatterns PS00163 Fumarate lyases signature. 320 329 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 syc0900_c 591a0366de9d49c257a4227d8b691828 352 Gene3D G3DSA:3.30.70.20 90 184 5.2E-7 T 11-10-2018 syc0900_c 591a0366de9d49c257a4227d8b691828 352 SUPERFAMILY SSF54862 64 149 1.09E-16 T 11-10-2018 syc0900_c 591a0366de9d49c257a4227d8b691828 352 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 124 135 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site syc0900_c 591a0366de9d49c257a4227d8b691828 352 Pfam PF12617 Iron-Sulfur binding protein C terminal 156 331 8.4E-67 T 11-10-2018 IPR021039 Iron-sulphur binding protein LdpA, C-terminal syc0900_c 591a0366de9d49c257a4227d8b691828 352 Pfam PF12837 4Fe-4S binding domain 91 114 1.1E-5 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain syc1594_d 7e18008c0b20c6839de16e491865e5a2 429 Pfam PF01938 TRAM domain 350 413 1.4E-5 T 11-10-2018 IPR002792 TRAM domain syc1594_d 7e18008c0b20c6839de16e491865e5a2 429 SMART SM00729 121 338 7.3E-49 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 syc1594_d 7e18008c0b20c6839de16e491865e5a2 429 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 1 411 1.6E-164 T 11-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 syc1594_d 7e18008c0b20c6839de16e491865e5a2 429 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 1 411 1.7E-122 T 11-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 syc1594_d 7e18008c0b20c6839de16e491865e5a2 429 SUPERFAMILY SSF102114 109 343 1.22E-52 T 11-10-2018 syc1594_d 7e18008c0b20c6839de16e491865e5a2 429 Pfam PF04055 Radical SAM superfamily 127 296 3.5E-29 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 syc1594_d 7e18008c0b20c6839de16e491865e5a2 429 Gene3D G3DSA:2.40.50.140 353 419 2.1E-18 T 11-10-2018 syc1594_d 7e18008c0b20c6839de16e491865e5a2 429 Gene3D G3DSA:3.80.30.20 119 352 4.1E-73 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe syc1594_d 7e18008c0b20c6839de16e491865e5a2 429 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 125 145 - T 11-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 syc1594_d 7e18008c0b20c6839de16e491865e5a2 429 Gene3D G3DSA:3.40.50.12160 1 109 2.6E-24 T 11-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily syc1594_d 7e18008c0b20c6839de16e491865e5a2 429 Pfam PF00919 Uncharacterized protein family UPF0004 1 77 2.1E-15 T 11-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 syc1594_d 7e18008c0b20c6839de16e491865e5a2 429 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 1 413 59.444 T 11-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 syc0050_d 829603228a7c72108ae0332ac936fa79 254 SUPERFAMILY SSF47240 32 250 8.12E-84 T 11-10-2018 IPR009078 Ferritin-like superfamily syc0050_d 829603228a7c72108ae0332ac936fa79 254 Hamap MF_00931 Aldehyde decarbonylase. 24 252 49.955 T 11-10-2018 IPR022612 Long-chain fatty aldehyde decarbonylase GO:0071771 KEGG: 00073+4.1.99.5|MetaCyc: PWY-282|MetaCyc: PWY-6622|MetaCyc: PWY-7032 syc0050_d 829603228a7c72108ae0332ac936fa79 254 Gene3D G3DSA:1.20.1260.10 37 254 6.9E-110 T 11-10-2018 IPR012347 Ferritin-like syc0050_d 829603228a7c72108ae0332ac936fa79 254 Pfam PF11266 Long-chain fatty aldehyde decarbonylase 34 251 1.5E-120 T 11-10-2018 IPR022612 Long-chain fatty aldehyde decarbonylase GO:0071771 KEGG: 00073+4.1.99.5|MetaCyc: PWY-282|MetaCyc: PWY-6622|MetaCyc: PWY-7032 syc0050_d 829603228a7c72108ae0332ac936fa79 254 TIGRFAM TIGR04059 Ald_deCOase: long-chain fatty aldehyde decarbonylase 33 251 5.0E-126 T 11-10-2018 IPR022612 Long-chain fatty aldehyde decarbonylase GO:0071771 KEGG: 00073+4.1.99.5|MetaCyc: PWY-282|MetaCyc: PWY-6622|MetaCyc: PWY-7032 syc2331_c 73dade73eaee59c384f8ce426478e6f6 576 Pfam PF02321 Outer membrane efflux protein 366 564 4.0E-35 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 syc2331_c 73dade73eaee59c384f8ce426478e6f6 576 Pfam PF02321 Outer membrane efflux protein 143 343 3.0E-30 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 syc2331_c 73dade73eaee59c384f8ce426478e6f6 576 Gene3D G3DSA:1.20.1600.10 68 570 5.0E-92 T 11-10-2018 syc2331_c 73dade73eaee59c384f8ce426478e6f6 576 SUPERFAMILY SSF56954 80 565 1.57E-88 T 11-10-2018 syc2331_c 73dade73eaee59c384f8ce426478e6f6 576 PIRSF PIRSF001892 47 573 3.8E-66 T 11-10-2018 IPR028351 Cyclolysin transport protein CyaE GO:0005215 syc2334_d 5f891eb93850125a72ecb5ba9ab82c8a 351 Pfam PF04055 Radical SAM superfamily 107 271 1.0E-14 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 syc2334_d 5f891eb93850125a72ecb5ba9ab82c8a 351 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 7 345 1.4E-132 T 11-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 syc2334_d 5f891eb93850125a72ecb5ba9ab82c8a 351 SUPERFAMILY SSF102114 99 317 2.85E-17 T 11-10-2018 syc2334_d 5f891eb93850125a72ecb5ba9ab82c8a 351 Gene3D G3DSA:3.20.20.70 66 330 1.1E-98 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 syc2334_d 5f891eb93850125a72ecb5ba9ab82c8a 351 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 4 346 66.365 T 11-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 syc2334_d 5f891eb93850125a72ecb5ba9ab82c8a 351 Gene3D G3DSA:1.10.150.530 5 63 7.2E-13 T 11-10-2018 syc2334_d 5f891eb93850125a72ecb5ba9ab82c8a 351 PIRSF PIRSF006004 3 349 2.7E-125 T 11-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 syc0209_c ad62cb4658b70fd0a6a39d8a79a19e1f 202 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 104 115 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site syc0209_c ad62cb4658b70fd0a6a39d8a79a19e1f 202 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 25 140 6.4E-41 T 11-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc0209_c ad62cb4658b70fd0a6a39d8a79a19e1f 202 Pfam PF13237 4Fe-4S dicluster domain 57 115 1.4E-10 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain syc0209_c ad62cb4658b70fd0a6a39d8a79a19e1f 202 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 16 149 23.88 T 11-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc0209_c ad62cb4658b70fd0a6a39d8a79a19e1f 202 TIGRFAM TIGR00403 ndhI: NADH-plastoquinone oxidoreductase, I subunit 1 173 7.0E-102 T 11-10-2018 IPR004497 NADH-plastoquinone oxidoreductase, subunit I GO:0008137|GO:0055114 syc0209_c ad62cb4658b70fd0a6a39d8a79a19e1f 202 SUPERFAMILY SSF54862 42 148 2.3E-26 T 11-10-2018 syc0209_c ad62cb4658b70fd0a6a39d8a79a19e1f 202 Gene3D G3DSA:3.30.70.3270 42 160 3.0E-29 T 11-10-2018 syc0246_c af20cfb2a9d5e8481c69f345c3786643 271 Pfam PF01061 ABC-2 type transporter 24 236 2.9E-18 T 11-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 syc0246_c af20cfb2a9d5e8481c69f345c3786643 271 PIRSF PIRSF006648 7 270 5.4E-25 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 syc2497_c 720b9ca1f46a6aa4621c3f758dd42747 481 Gene3D G3DSA:3.50.50.60 336 481 1.3E-7 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc2497_c 720b9ca1f46a6aa4621c3f758dd42747 481 Gene3D G3DSA:3.50.50.60 1 288 8.2E-24 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc2497_c 720b9ca1f46a6aa4621c3f758dd42747 481 SUPERFAMILY SSF51905 1 475 4.75E-61 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc2497_c 720b9ca1f46a6aa4621c3f758dd42747 481 PRINTS PR00419 Adrenodoxin reductase family signature 25 38 3.4E-6 T 11-10-2018 syc2497_c 720b9ca1f46a6aa4621c3f758dd42747 481 PRINTS PR00419 Adrenodoxin reductase family signature 2 24 3.4E-6 T 11-10-2018 syc2497_c 720b9ca1f46a6aa4621c3f758dd42747 481 Pfam PF01593 Flavin containing amine oxidoreductase 10 474 2.4E-64 T 11-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 syc2497_c 720b9ca1f46a6aa4621c3f758dd42747 481 TIGRFAM TIGR02732 zeta_caro_desat: 9,9'-di-cis-zeta-carotene desaturase 2 474 4.2E-271 T 11-10-2018 IPR014103 Zeta-carotene desaturase GO:0016117|GO:0016719|GO:0055114 KEGG: 00906+1.3.5.6 syc1000_c 2c53b5f0e2d3d3414a749a2902627db2 213 Gene3D G3DSA:3.30.70.1810 3 104 1.4E-39 T 11-10-2018 syc1000_c 2c53b5f0e2d3d3414a749a2902627db2 213 Gene3D G3DSA:3.30.70.1810 105 210 1.3E-39 T 11-10-2018 syc1000_c 2c53b5f0e2d3d3414a749a2902627db2 213 SMART SM00877 35 117 0.21 T 11-10-2018 IPR000249 Microcompartment protein, bacteria syc1000_c 2c53b5f0e2d3d3414a749a2902627db2 213 SMART SM00877 138 211 8.0E-9 T 11-10-2018 IPR000249 Microcompartment protein, bacteria syc2283_c 3c939694ed6d410a31051c8472489589 584 Pfam PF00258 Flavodoxin 269 390 8.4E-8 T 11-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 syc2283_c 3c939694ed6d410a31051c8472489589 584 SUPERFAMILY SSF50475 428 579 2.89E-40 T 11-10-2018 syc2283_c 3c939694ed6d410a31051c8472489589 584 ProSitePatterns PS00201 Flavodoxin signature. 269 285 - T 11-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 syc2283_c 3c939694ed6d410a31051c8472489589 584 Pfam PF01613 Flavin reductase like domain 441 579 1.2E-21 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 syc2283_c 3c939694ed6d410a31051c8472489589 584 Gene3D G3DSA:2.30.110.10 416 583 1.7E-31 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 syc2283_c 3c939694ed6d410a31051c8472489589 584 Gene3D G3DSA:3.40.50.360 265 415 7.7E-46 T 11-10-2018 IPR029039 Flavoprotein-like superfamily syc2283_c 3c939694ed6d410a31051c8472489589 584 Gene3D G3DSA:3.60.15.10 1 264 3.4E-76 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like syc2283_c 3c939694ed6d410a31051c8472489589 584 SUPERFAMILY SSF56281 14 253 6.72E-29 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like syc2283_c 3c939694ed6d410a31051c8472489589 584 SMART SM00903 435 584 1.3E-40 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 syc2283_c 3c939694ed6d410a31051c8472489589 584 SMART SM00849 42 238 2.7E-12 T 11-10-2018 IPR001279 Metallo-beta-lactamase syc2283_c 3c939694ed6d410a31051c8472489589 584 SUPERFAMILY SSF52218 267 412 4.59E-40 T 11-10-2018 IPR029039 Flavoprotein-like superfamily syc1459_c fc8e9817e88741260d6f761480100498 125 SUPERFAMILY SSF55620 2 120 1.06E-32 T 11-10-2018 syc1459_c fc8e9817e88741260d6f761480100498 125 Pfam PF02152 Dihydroneopterin aldolase 5 114 1.4E-26 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 syc1459_c fc8e9817e88741260d6f761480100498 125 Gene3D G3DSA:3.30.1130.10 1 120 5.3E-31 T 11-10-2018 syc1459_c fc8e9817e88741260d6f761480100498 125 TIGRFAM TIGR00526 folB_dom: FolB domain 1 120 1.9E-23 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 syc1459_c fc8e9817e88741260d6f761480100498 125 SMART SM00905 4 117 1.7E-41 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 syc1459_c fc8e9817e88741260d6f761480100498 125 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 4 117 1.2E-26 T 11-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 syc1363_d 9430db12bc16b4e25609b63739fa3a88 464 Gene3D G3DSA:3.30.70.3400 48 272 3.1E-64 T 11-10-2018 syc1363_d 9430db12bc16b4e25609b63739fa3a88 464 Pfam PF07549 SecD/SecF GG Motif 21 47 2.5E-5 T 11-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site syc1363_d 9430db12bc16b4e25609b63739fa3a88 464 Pfam PF02355 Protein export membrane protein 274 439 7.4E-15 T 11-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial syc1363_d 9430db12bc16b4e25609b63739fa3a88 464 Gene3D G3DSA:1.20.1640.10 273 447 2.8E-12 T 11-10-2018 syc1363_d 9430db12bc16b4e25609b63739fa3a88 464 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 196 433 2.4E-74 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial syc1363_d 9430db12bc16b4e25609b63739fa3a88 464 SUPERFAMILY SSF82866 247 442 1.83E-39 T 11-10-2018 syc1363_d 9430db12bc16b4e25609b63739fa3a88 464 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 1 455 37.696 T 11-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 syc1363_d 9430db12bc16b4e25609b63739fa3a88 464 Gene3D G3DSA:3.30.1360.200 108 271 3.1E-64 T 11-10-2018 syc1363_d 9430db12bc16b4e25609b63739fa3a88 464 PRINTS PR00702 Acriflavin resistance protein family signature 289 312 1.9E-11 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 syc1363_d 9430db12bc16b4e25609b63739fa3a88 464 PRINTS PR00702 Acriflavin resistance protein family signature 3 27 1.9E-11 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 syc1363_d 9430db12bc16b4e25609b63739fa3a88 464 PRINTS PR00702 Acriflavin resistance protein family signature 342 366 1.9E-11 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 syc1363_d 9430db12bc16b4e25609b63739fa3a88 464 PRINTS PR00702 Acriflavin resistance protein family signature 417 440 1.9E-11 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 syc1363_d 9430db12bc16b4e25609b63739fa3a88 464 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 29 440 1.7E-128 T 11-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 syc1046_c a0db3c860e96472532ea477a87ff0dd2 74 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 9 64 4.2E-16 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 syc1046_c a0db3c860e96472532ea477a87ff0dd2 74 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 49 1.0E-20 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 syc1046_c a0db3c860e96472532ea477a87ff0dd2 74 SUPERFAMILY SSF116842 3 69 1.1E-16 T 11-10-2018 syc1046_c a0db3c860e96472532ea477a87ff0dd2 74 Gene3D G3DSA:1.10.287.1040 4 73 7.8E-14 T 11-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 syc1046_c a0db3c860e96472532ea477a87ff0dd2 74 PIRSF PIRSF006488 1 73 1.3E-19 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 syc1046_c a0db3c860e96472532ea477a87ff0dd2 74 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 9 69 12.82 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 syc1046_c a0db3c860e96472532ea477a87ff0dd2 74 Pfam PF02609 Exonuclease VII small subunit 10 58 3.2E-14 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 syc1203_d 23e4fcda6cb96ed2d868d546d0e530f9 314 Gene3D G3DSA:3.30.70.890 164 311 4.2E-26 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily syc1203_d 23e4fcda6cb96ed2d868d546d0e530f9 314 PIRSF PIRSF010376 2 309 4.8E-83 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 syc1203_d 23e4fcda6cb96ed2d868d546d0e530f9 314 Pfam PF00288 GHMP kinases N terminal domain 88 145 5.5E-5 T 11-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 syc1203_d 23e4fcda6cb96ed2d868d546d0e530f9 314 Gene3D G3DSA:3.30.230.10 1 159 1.4E-52 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup syc1203_d 23e4fcda6cb96ed2d868d546d0e530f9 314 SUPERFAMILY SSF55060 162 291 6.0E-24 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily syc1203_d 23e4fcda6cb96ed2d868d546d0e530f9 314 SUPERFAMILY SSF54211 3 159 1.21E-37 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold syc1203_d 23e4fcda6cb96ed2d868d546d0e530f9 314 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 4 305 33.287 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 syc1203_d 23e4fcda6cb96ed2d868d546d0e530f9 314 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 3 308 3.3E-75 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 syc1203_d 23e4fcda6cb96ed2d868d546d0e530f9 314 Pfam PF08544 GHMP kinases C terminal 213 289 6.2E-12 T 11-10-2018 IPR013750 GHMP kinase, C-terminal domain syc2261_c 065ffa8743abccf33de3e815824a7bee 252 PIRSF PIRSF009320 97 241 2.1E-8 T 11-10-2018 syc2261_c 065ffa8743abccf33de3e815824a7bee 252 PIRSF PIRSF009320 1 71 8.5E-11 T 11-10-2018 syc2261_c 065ffa8743abccf33de3e815824a7bee 252 Gene3D G3DSA:3.40.50.300 1 250 3.7E-48 T 11-10-2018 syc2261_c 065ffa8743abccf33de3e815824a7bee 252 Pfam PF13614 AAA domain 3 165 1.7E-33 T 11-10-2018 IPR025669 AAA domain syc2261_c 065ffa8743abccf33de3e815824a7bee 252 SUPERFAMILY SSF52540 4 234 2.23E-36 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0492_c 1302660fdbf839cdb19bf5977b37b8da 260 Pfam PF13413 Helix-turn-helix domain 18 77 2.1E-24 T 11-10-2018 syc0492_c 1302660fdbf839cdb19bf5977b37b8da 260 Gene3D G3DSA:1.10.260.40 6 105 6.9E-27 T 11-10-2018 syc0492_c 1302660fdbf839cdb19bf5977b37b8da 260 SMART SM00530 17 78 2.1E-5 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 syc0492_c 1302660fdbf839cdb19bf5977b37b8da 260 Pfam PF13464 Domain of unknown function (DUF4115) 172 238 7.3E-11 T 11-10-2018 IPR025194 Domain of unknown function DUF4115 syc0492_c 1302660fdbf839cdb19bf5977b37b8da 260 SUPERFAMILY SSF47413 11 80 1.16E-6 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 syc1315_d 240a822afe10e7f47cf0ecea9697d575 493 Pfam PF03055 Retinal pigment epithelial membrane protein 25 486 1.8E-113 T 11-10-2018 IPR004294 Carotenoid oxygenase GO:0016702|GO:0055114 syc1315_d 240a822afe10e7f47cf0ecea9697d575 493 SUPERFAMILY SSF51004 344 487 5.49E-7 T 11-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily syc1029_c bc1a540bbfb07b229fd3ee5de3f7bfc6 686 SUPERFAMILY SSF55073 530 684 5.41E-45 T 11-10-2018 IPR029787 Nucleotide cyclase syc1029_c bc1a540bbfb07b229fd3ee5de3f7bfc6 686 Pfam PF08448 PAS fold 285 377 5.0E-6 T 11-10-2018 IPR013656 PAS fold-4 syc1029_c bc1a540bbfb07b229fd3ee5de3f7bfc6 686 SUPERFAMILY SSF55785 405 515 9.25E-18 T 11-10-2018 IPR035965 PAS domain superfamily syc1029_c bc1a540bbfb07b229fd3ee5de3f7bfc6 686 Pfam PF00990 Diguanylate cyclase, GGDEF domain 525 681 1.9E-40 T 11-10-2018 IPR000160 GGDEF domain syc1029_c bc1a540bbfb07b229fd3ee5de3f7bfc6 686 SMART SM00091 128 194 1.5E-5 T 11-10-2018 IPR000014 PAS domain syc1029_c bc1a540bbfb07b229fd3ee5de3f7bfc6 686 SMART SM00091 257 332 0.047 T 11-10-2018 IPR000014 PAS domain syc1029_c bc1a540bbfb07b229fd3ee5de3f7bfc6 686 SMART SM00091 395 463 0.021 T 11-10-2018 IPR000014 PAS domain syc1029_c bc1a540bbfb07b229fd3ee5de3f7bfc6 686 SMART SM00267 514 685 4.3E-56 T 11-10-2018 IPR000160 GGDEF domain syc1029_c bc1a540bbfb07b229fd3ee5de3f7bfc6 686 Gene3D G3DSA:2.10.70.100 468 513 2.8E-13 T 11-10-2018 syc1029_c bc1a540bbfb07b229fd3ee5de3f7bfc6 686 SMART SM00086 471 514 4.6E-10 T 11-10-2018 IPR001610 PAC motif syc1029_c bc1a540bbfb07b229fd3ee5de3f7bfc6 686 SMART SM00086 203 245 1.1E-5 T 11-10-2018 IPR001610 PAC motif syc1029_c bc1a540bbfb07b229fd3ee5de3f7bfc6 686 Gene3D G3DSA:3.30.70.270 514 684 2.0E-51 T 11-10-2018 syc1029_c bc1a540bbfb07b229fd3ee5de3f7bfc6 686 SUPERFAMILY SSF55785 133 246 9.22E-18 T 11-10-2018 IPR035965 PAS domain superfamily syc1029_c bc1a540bbfb07b229fd3ee5de3f7bfc6 686 SUPERFAMILY SSF55785 241 339 1.27E-11 T 11-10-2018 IPR035965 PAS domain superfamily syc1029_c bc1a540bbfb07b229fd3ee5de3f7bfc6 686 Gene3D G3DSA:3.30.450.20 115 252 1.6E-19 T 11-10-2018 syc1029_c bc1a540bbfb07b229fd3ee5de3f7bfc6 686 Gene3D G3DSA:3.30.450.20 253 390 5.1E-17 T 11-10-2018 syc1029_c bc1a540bbfb07b229fd3ee5de3f7bfc6 686 Pfam PF08447 PAS fold 153 236 1.2E-10 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 syc1029_c bc1a540bbfb07b229fd3ee5de3f7bfc6 686 Pfam PF08447 PAS fold 419 508 9.7E-20 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 syc1029_c bc1a540bbfb07b229fd3ee5de3f7bfc6 686 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 405 521 3.8E-9 T 11-10-2018 IPR000014 PAS domain syc1029_c bc1a540bbfb07b229fd3ee5de3f7bfc6 686 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 127 252 4.4E-14 T 11-10-2018 IPR000014 PAS domain syc1029_c bc1a540bbfb07b229fd3ee5de3f7bfc6 686 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 521 682 1.9E-42 T 11-10-2018 IPR000160 GGDEF domain syc1029_c bc1a540bbfb07b229fd3ee5de3f7bfc6 686 Gene3D G3DSA:3.30.450.20 392 460 1.6E-10 T 11-10-2018 syc0759_d 02890c32971a517465bf3a1ffd4f6240 252 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 223 231 - T 11-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 syc0759_d 02890c32971a517465bf3a1ffd4f6240 252 SUPERFAMILY SSF53223 1 85 8.92E-28 T 11-10-2018 syc0759_d 02890c32971a517465bf3a1ffd4f6240 252 Gene3D G3DSA:3.40.50.720 103 222 7.7E-102 T 11-10-2018 syc0759_d 02890c32971a517465bf3a1ffd4f6240 252 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 87 244 1.4E-72 T 11-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 syc0759_d 02890c32971a517465bf3a1ffd4f6240 252 Gene3D G3DSA:3.40.50.10860 1 239 7.7E-102 T 11-10-2018 syc0759_d 02890c32971a517465bf3a1ffd4f6240 252 SUPERFAMILY SSF51735 86 244 7.63E-55 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily syc0759_d 02890c32971a517465bf3a1ffd4f6240 252 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 1 84 4.2E-27 T 11-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 syc0759_d 02890c32971a517465bf3a1ffd4f6240 252 Hamap MF_01576 Bifunctional protein FolD [folD]. 1 246 32.55 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 syc0759_d 02890c32971a517465bf3a1ffd4f6240 252 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 202 218 1.9E-69 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 syc0759_d 02890c32971a517465bf3a1ffd4f6240 252 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 73 94 1.9E-69 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 syc0759_d 02890c32971a517465bf3a1ffd4f6240 252 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 167 196 1.9E-69 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 syc0759_d 02890c32971a517465bf3a1ffd4f6240 252 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 38 65 1.9E-69 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 syc0759_d 02890c32971a517465bf3a1ffd4f6240 252 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 219 237 1.9E-69 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 syc0759_d 02890c32971a517465bf3a1ffd4f6240 252 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 118 138 1.9E-69 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 syc1631_c 2f437c401bcaf561132c25de2b7cfc40 462 Gene3D G3DSA:3.30.450.40 45 200 8.2E-9 T 11-10-2018 IPR029016 GAF-like domain superfamily syc1631_c 2f437c401bcaf561132c25de2b7cfc40 462 Gene3D G3DSA:3.60.40.10 201 461 9.5E-66 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 syc1631_c 2f437c401bcaf561132c25de2b7cfc40 462 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 269 460 7.9E-55 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 syc1631_c 2f437c401bcaf561132c25de2b7cfc40 462 SUPERFAMILY SSF81606 241 460 4.71E-7 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 syc1631_c 2f437c401bcaf561132c25de2b7cfc40 462 SUPERFAMILY SSF55781 41 221 5.89E-10 T 11-10-2018 syc1631_c 2f437c401bcaf561132c25de2b7cfc40 462 SMART SM00331 227 461 4.6E-46 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 syc1631_c 2f437c401bcaf561132c25de2b7cfc40 462 SMART SM00065 59 200 0.0042 T 11-10-2018 IPR003018 GAF domain GO:0005515 syc2040_c 10780791981749f1c3f5a0381ca00756 643 SUPERFAMILY SSF82171 158 352 2.09E-18 T 11-10-2018 syc2040_c 10780791981749f1c3f5a0381ca00756 643 SUPERFAMILY SSF53474 368 624 9.37E-67 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold syc2040_c 10780791981749f1c3f5a0381ca00756 643 Pfam PF00326 Prolyl oligopeptidase family 419 625 2.9E-48 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 syc2040_c 10780791981749f1c3f5a0381ca00756 643 Gene3D G3DSA:3.40.50.1820 358 633 7.5E-80 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold syc2040_c 10780791981749f1c3f5a0381ca00756 643 Gene3D G3DSA:2.120.10.30 73 308 1.4E-7 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like syc1049_d 6cea4e5d63030c346ec8860eeceb2bcd 532 PIRSF PIRSF001492 2 517 2.2E-207 T 11-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 syc1049_d 6cea4e5d63030c346ec8860eeceb2bcd 532 SUPERFAMILY SSF64158 80 305 1.2E-83 T 11-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 syc1049_d 6cea4e5d63030c346ec8860eeceb2bcd 532 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 8 514 3.1E-220 T 11-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 syc1049_d 6cea4e5d63030c346ec8860eeceb2bcd 532 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 7 515 49.484 T 11-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 syc1049_d 6cea4e5d63030c346ec8860eeceb2bcd 532 Gene3D G3DSA:3.40.720.10 8 514 2.4E-217 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 syc1049_d 6cea4e5d63030c346ec8860eeceb2bcd 532 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 85 295 1.5E-76 T 11-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 syc1049_d 6cea4e5d63030c346ec8860eeceb2bcd 532 Gene3D G3DSA:3.40.1450.10 80 307 2.4E-217 T 11-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 syc1049_d 6cea4e5d63030c346ec8860eeceb2bcd 532 Pfam PF01676 Metalloenzyme superfamily 8 503 1.4E-82 T 11-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 syc1049_d 6cea4e5d63030c346ec8860eeceb2bcd 532 SUPERFAMILY SSF53649 8 514 1.13E-76 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 syc0752_c 53f47f0154b76ba722c21010eb4310cd 677 SUPERFAMILY SSF56601 143 527 1.05E-125 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like syc0752_c 53f47f0154b76ba722c21010eb4310cd 677 Pfam PF00905 Penicillin binding protein transpeptidase domain 247 501 1.6E-36 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 syc0752_c 53f47f0154b76ba722c21010eb4310cd 677 Gene3D G3DSA:3.40.710.10 186 540 4.0E-121 T 11-10-2018 syc0752_c 53f47f0154b76ba722c21010eb4310cd 677 SUPERFAMILY SSF53955 1 189 3.09E-71 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily syc0752_c 53f47f0154b76ba722c21010eb4310cd 677 Gene3D G3DSA:1.10.3810.10 1 185 3.6E-72 T 11-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 syc0752_c 53f47f0154b76ba722c21010eb4310cd 677 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 1 515 3.2E-187 T 11-10-2018 syc0752_c 53f47f0154b76ba722c21010eb4310cd 677 Pfam PF00912 Transglycosylase 1 162 1.4E-61 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 syc0070_d 6697a413a41f1bba547cb45e5d1cb37b 199 Pfam PF10989 Protein of unknown function (DUF2808) 55 194 9.5E-35 T 11-10-2018 IPR021256 Protein of unknown function DUF2808 syc0659_c 4a53d53ce7e860987d02ed72806d1c22 298 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 232 239 - T 11-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 syc0659_c 4a53d53ce7e860987d02ed72806d1c22 298 Gene3D G3DSA:3.30.70.260 196 290 8.8E-25 T 11-10-2018 syc0659_c 4a53d53ce7e860987d02ed72806d1c22 298 Pfam PF01842 ACT domain 204 270 5.6E-10 T 11-10-2018 IPR002912 ACT domain syc0659_c 4a53d53ce7e860987d02ed72806d1c22 298 Gene3D G3DSA:3.40.190.10 16 194 5.8E-52 T 11-10-2018 syc0659_c 4a53d53ce7e860987d02ed72806d1c22 298 SUPERFAMILY SSF55021 190 283 2.18E-21 T 11-10-2018 syc0659_c 4a53d53ce7e860987d02ed72806d1c22 298 PIRSF PIRSF001500 3 287 2.8E-67 T 11-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 syc0659_c 4a53d53ce7e860987d02ed72806d1c22 298 Gene3D G3DSA:3.40.190.10 101 185 5.8E-52 T 11-10-2018 syc0659_c 4a53d53ce7e860987d02ed72806d1c22 298 Pfam PF00800 Prephenate dehydratase 13 197 2.0E-53 T 11-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 syc0659_c 4a53d53ce7e860987d02ed72806d1c22 298 SUPERFAMILY SSF53850 13 198 1.18E-49 T 11-10-2018 syc0557_d 47e0f3124c7a8c46f0a6d15666eabb93 147 Pfam PF01475 Ferric uptake regulator family 14 136 4.2E-41 T 11-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 syc0557_d 47e0f3124c7a8c46f0a6d15666eabb93 147 Gene3D G3DSA:3.30.1490.190 92 146 1.6E-14 T 11-10-2018 syc0557_d 47e0f3124c7a8c46f0a6d15666eabb93 147 SUPERFAMILY SSF46785 8 140 2.07E-37 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily syc0557_d 47e0f3124c7a8c46f0a6d15666eabb93 147 Gene3D G3DSA:1.10.10.10 4 89 1.3E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily syc1159_d 4e90d0334e7103dce86c6236a98031fe 520 Gene3D G3DSA:3.40.50.10870 370 519 5.6E-34 T 11-10-2018 syc1159_d 4e90d0334e7103dce86c6236a98031fe 520 SUPERFAMILY SSF51445 22 365 8.53E-86 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily syc1159_d 4e90d0334e7103dce86c6236a98031fe 520 Gene3D G3DSA:3.20.20.300 1 346 6.0E-131 T 11-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 syc1159_d 4e90d0334e7103dce86c6236a98031fe 520 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 19 320 1.8E-90 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 syc0583_d d51322f0ff87f5ee7489585687a0e8fe 343 PIRSF PIRSF002401 1 342 5.8E-132 T 11-10-2018 IPR035101 GTP-binding protein, Obg-type syc0583_d d51322f0ff87f5ee7489585687a0e8fe 343 Pfam PF01926 50S ribosome-binding GTPase 161 281 2.0E-22 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 syc0583_d d51322f0ff87f5ee7489585687a0e8fe 343 Pfam PF01018 GTP1/OBG 4 158 5.5E-58 T 11-10-2018 IPR006169 GTP1/OBG domain syc0583_d d51322f0ff87f5ee7489585687a0e8fe 343 Gene3D G3DSA:3.40.50.300 161 340 3.8E-47 T 11-10-2018 syc0583_d d51322f0ff87f5ee7489585687a0e8fe 343 SUPERFAMILY SSF52540 151 331 1.24E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0583_d d51322f0ff87f5ee7489585687a0e8fe 343 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 327 1.1E-136 T 11-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 syc0583_d d51322f0ff87f5ee7489585687a0e8fe 343 SUPERFAMILY SSF82051 3 158 4.97E-55 T 11-10-2018 IPR036726 GTP1/OBG domain superfamily syc0583_d d51322f0ff87f5ee7489585687a0e8fe 343 Hamap MF_01454 GTPase Obg [obg]. 2 328 45.956 T 11-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 syc0583_d d51322f0ff87f5ee7489585687a0e8fe 343 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 11-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 syc0583_d d51322f0ff87f5ee7489585687a0e8fe 343 Gene3D G3DSA:2.70.210.12 1 158 2.1E-58 T 11-10-2018 IPR036726 GTP1/OBG domain superfamily syc0583_d d51322f0ff87f5ee7489585687a0e8fe 343 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 1.4E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 syc0583_d d51322f0ff87f5ee7489585687a0e8fe 343 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 1.4E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 syc0583_d d51322f0ff87f5ee7489585687a0e8fe 343 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 1.4E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 syc0583_d d51322f0ff87f5ee7489585687a0e8fe 343 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 1.4E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 syc2179_d ccdd04dd753b4258a2d987ff47433a51 130 Gene3D G3DSA:3.30.1330.40 3 129 4.1E-47 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 syc2179_d ccdd04dd753b4258a2d987ff47433a51 130 Pfam PF07736 Chorismate mutase type I 5 121 2.7E-48 T 11-10-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 syc2179_d ccdd04dd753b4258a2d987ff47433a51 130 PIRSF PIRSF005965 3 127 6.5E-55 T 11-10-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 syc2179_d ccdd04dd753b4258a2d987ff47433a51 130 TIGRFAM TIGR01796 CM_mono_aroH: chorismate mutase 5 121 1.8E-47 T 11-10-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 syc2179_d ccdd04dd753b4258a2d987ff47433a51 130 SUPERFAMILY SSF55298 3 126 1.1E-51 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 syc2179_d ccdd04dd753b4258a2d987ff47433a51 130 ProDom PD031888 MUTASE CHORISMATE AROH THE CLASS ISOMERASE TRANSCRIPTION BIOSYNTHESIS CM 3D-STRUCTURE 11 124 6.0E-62 T 11-10-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 syc2438_d 16126e5f76abfb09767cd343b7ef9729 149 Gene3D G3DSA:3.30.1490.190 90 144 4.6E-9 T 11-10-2018 syc2438_d 16126e5f76abfb09767cd343b7ef9729 149 Gene3D G3DSA:1.10.10.10 6 88 2.2E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily syc2438_d 16126e5f76abfb09767cd343b7ef9729 149 Pfam PF01475 Ferric uptake regulator family 18 120 9.8E-21 T 11-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 syc2438_d 16126e5f76abfb09767cd343b7ef9729 149 SUPERFAMILY SSF46785 11 138 1.05E-30 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily syc1872_d 4d161ef55584a6799616d437fac7851c 142 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 135 41.814 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc1872_d 4d161ef55584a6799616d437fac7851c 142 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 11-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc1872_d 4d161ef55584a6799616d437fac7851c 142 PRINTS PR00060 Ribosomal protein L16 signature 24 36 2.8E-37 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc1872_d 4d161ef55584a6799616d437fac7851c 142 PRINTS PR00060 Ribosomal protein L16 signature 88 117 2.8E-37 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc1872_d 4d161ef55584a6799616d437fac7851c 142 PRINTS PR00060 Ribosomal protein L16 signature 42 53 2.8E-37 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc1872_d 4d161ef55584a6799616d437fac7851c 142 PRINTS PR00060 Ribosomal protein L16 signature 58 87 2.8E-37 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc1872_d 4d161ef55584a6799616d437fac7851c 142 Pfam PF00252 Ribosomal protein L16p/L10e 4 133 6.3E-52 T 11-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 syc1872_d 4d161ef55584a6799616d437fac7851c 142 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 11-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc1872_d 4d161ef55584a6799616d437fac7851c 142 SUPERFAMILY SSF54686 1 137 3.01E-59 T 11-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 syc1872_d 4d161ef55584a6799616d437fac7851c 142 Gene3D G3DSA:3.90.1170.10 1 142 3.8E-59 T 11-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 syc1872_d 4d161ef55584a6799616d437fac7851c 142 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 128 3.2E-63 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc1300_c e1dd0d1a2ee17ab18b263d0c64e399b3 362 Pfam PF01264 Chorismate synthase 9 353 9.2E-143 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 syc1300_c e1dd0d1a2ee17ab18b263d0c64e399b3 362 TIGRFAM TIGR00033 aroC: chorismate synthase 9 357 3.4E-140 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 syc1300_c e1dd0d1a2ee17ab18b263d0c64e399b3 362 ProSitePatterns PS00787 Chorismate synthase signature 1. 15 30 - T 11-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 syc1300_c e1dd0d1a2ee17ab18b263d0c64e399b3 362 SUPERFAMILY SSF103263 3 360 7.19E-143 T 11-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 syc1300_c e1dd0d1a2ee17ab18b263d0c64e399b3 362 PIRSF PIRSF001456 2 362 4.0E-156 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 syc1300_c e1dd0d1a2ee17ab18b263d0c64e399b3 362 ProSitePatterns PS00788 Chorismate synthase signature 2. 123 139 - T 11-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 syc1300_c e1dd0d1a2ee17ab18b263d0c64e399b3 362 Gene3D G3DSA:3.60.150.10 1 361 4.3E-153 T 11-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 syc1300_c e1dd0d1a2ee17ab18b263d0c64e399b3 362 Hamap MF_00300 Chorismate synthase [aroC]. 9 360 36.504 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 syc1300_c e1dd0d1a2ee17ab18b263d0c64e399b3 362 ProSitePatterns PS00789 Chorismate synthase signature 3. 327 343 - T 11-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 syc1880_d 3b2705ce880320e9b736b34664941ccf 120 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 4 120 1.6E-51 T 11-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc1880_d 3b2705ce880320e9b736b34664941ccf 120 SUPERFAMILY SSF53137 5 118 1.11E-55 T 11-10-2018 syc1880_d 3b2705ce880320e9b736b34664941ccf 120 Gene3D G3DSA:3.30.420.100 3 120 6.3E-48 T 11-10-2018 syc1880_d 3b2705ce880320e9b736b34664941ccf 120 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 6 120 7.1E-45 T 11-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc1880_d 3b2705ce880320e9b736b34664941ccf 120 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 4 120 29.539 T 11-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc0958_c dee078590905a1c9c4fa7ea3f92cb73c 237 SMART SM00382 35 223 1.1E-18 T 11-10-2018 IPR003593 AAA+ ATPase domain syc0958_c dee078590905a1c9c4fa7ea3f92cb73c 237 Pfam PF00005 ABC transporter 28 175 8.2E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 syc0958_c dee078590905a1c9c4fa7ea3f92cb73c 237 TIGRFAM TIGR02982 heterocyst_DevA: ABC exporter ATP-binding subunit, DevA family 6 224 1.3E-115 T 11-10-2018 IPR014324 ABC transporter ATP-binding subunit, DevA type syc0958_c dee078590905a1c9c4fa7ea3f92cb73c 237 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 syc0958_c dee078590905a1c9c4fa7ea3f92cb73c 237 SUPERFAMILY SSF52540 7 231 6.92E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0958_c dee078590905a1c9c4fa7ea3f92cb73c 237 Gene3D G3DSA:3.40.50.300 4 237 6.0E-69 T 11-10-2018 syc1839_c ba3a6ea8a3c5cbfaae7dccfa01762af6 182 Gene3D G3DSA:2.40.30.60 12 103 8.3E-23 T 11-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 syc1839_c ba3a6ea8a3c5cbfaae7dccfa01762af6 182 Pfam PF05239 PRC-barrel domain 107 179 7.0E-9 T 11-10-2018 IPR027275 PRC-barrel domain syc1839_c ba3a6ea8a3c5cbfaae7dccfa01762af6 182 Pfam PF01782 RimM N-terminal domain 15 100 3.0E-24 T 11-10-2018 IPR002676 RimM, N-terminal GO:0006364 syc1839_c ba3a6ea8a3c5cbfaae7dccfa01762af6 182 SUPERFAMILY SSF50346 109 179 2.98E-13 T 11-10-2018 IPR011033 PRC-barrel-like superfamily syc1839_c ba3a6ea8a3c5cbfaae7dccfa01762af6 182 SUPERFAMILY SSF50447 12 103 6.36E-20 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily syc1839_c ba3a6ea8a3c5cbfaae7dccfa01762af6 182 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 12 179 24.637 T 11-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 syc1839_c ba3a6ea8a3c5cbfaae7dccfa01762af6 182 Gene3D G3DSA:2.30.30.240 104 182 2.4E-13 T 11-10-2018 syc1839_c ba3a6ea8a3c5cbfaae7dccfa01762af6 182 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 12 179 8.3E-45 T 11-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 syc1780_c eed46e45b0418ee2f527b8f700f27762 96 SUPERFAMILY SSF141000 2 93 1.44E-29 T 11-10-2018 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C GO:0006450 syc1780_c eed46e45b0418ee2f527b8f700f27762 96 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 19 90 1.6E-21 T 11-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 syc1780_c eed46e45b0418ee2f527b8f700f27762 96 Gene3D G3DSA:1.10.20.60 1 93 5.1E-30 T 11-10-2018 syc1780_c eed46e45b0418ee2f527b8f700f27762 96 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 3 94 6.5E-29 T 11-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 syc1780_c eed46e45b0418ee2f527b8f700f27762 96 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 95 24.522 T 11-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 syc2127_c 67e22b59d8e58712cd43c5c20febb28e 452 SUPERFAMILY SSF102114 92 241 2.62E-8 T 11-10-2018 syc2127_c 67e22b59d8e58712cd43c5c20febb28e 452 TIGRFAM TIGR03279 cyano_FeS_chp: putative radical SAM enzyme, TIGR03279 family 10 441 5.9E-239 T 11-10-2018 IPR017673 Putative radical SAM enzyme, CHP03279 family syc2127_c 67e22b59d8e58712cd43c5c20febb28e 452 SUPERFAMILY SSF50156 8 99 1.24E-11 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 syc2127_c 67e22b59d8e58712cd43c5c20febb28e 452 Pfam PF04459 Protein of unknown function (DUF512) 229 431 3.3E-65 T 11-10-2018 IPR007549 Domain of unknown function DUF512 syc2127_c 67e22b59d8e58712cd43c5c20febb28e 452 Gene3D G3DSA:2.30.42.10 2 81 2.4E-7 T 11-10-2018 syc0868_c 8d651cb2e2175823a1dc06be0f498122 278 SUPERFAMILY SSF48179 166 276 5.67E-28 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 syc0868_c 8d651cb2e2175823a1dc06be0f498122 278 Gene3D G3DSA:3.40.50.720 1 165 5.6E-54 T 11-10-2018 syc0868_c 8d651cb2e2175823a1dc06be0f498122 278 Gene3D G3DSA:1.10.3660.10 166 278 3.8E-29 T 11-10-2018 syc0868_c 8d651cb2e2175823a1dc06be0f498122 278 Pfam PF02153 Prephenate dehydrogenase 20 269 2.7E-67 T 11-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 syc0868_c 8d651cb2e2175823a1dc06be0f498122 278 SUPERFAMILY SSF51735 1 164 5.15E-54 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily syc1211_c d399f457e50ef25800a4ff26fa331077 132 PIRSF PIRSF002070 11 124 3.6E-31 T 11-10-2018 syc1211_c d399f457e50ef25800a4ff26fa331077 132 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 13 121 1.0E-34 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 syc1211_c d399f457e50ef25800a4ff26fa331077 132 Hamap MF_00984 Single-stranded DNA-binding protein. 15 116 29.324 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 syc1211_c d399f457e50ef25800a4ff26fa331077 132 Pfam PF00436 Single-strand binding protein family 16 112 5.3E-29 T 11-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 syc1211_c d399f457e50ef25800a4ff26fa331077 132 SUPERFAMILY SSF50249 13 123 1.61E-37 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold syc1211_c d399f457e50ef25800a4ff26fa331077 132 Gene3D G3DSA:2.40.50.140 12 130 1.7E-33 T 11-10-2018 syc0650_c 6cd38d057b5e0558b1865bb10ce4a15f 1536 Gene3D G3DSA:2.160.20.60 1243 1522 1.1E-120 T 11-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 syc0650_c 6cd38d057b5e0558b1865bb10ce4a15f 1536 Pfam PF01493 GXGXG motif 1292 1476 4.2E-79 T 11-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 syc0650_c 6cd38d057b5e0558b1865bb10ce4a15f 1536 Pfam PF01645 Conserved region in glutamate synthase 823 1210 2.8E-161 T 11-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 syc0650_c 6cd38d057b5e0558b1865bb10ce4a15f 1536 Gene3D G3DSA:3.60.20.10 27 561 0.0 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal syc0650_c 6cd38d057b5e0558b1865bb10ce4a15f 1536 Gene3D G3DSA:3.20.20.70 451 822 0.0 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 syc0650_c 6cd38d057b5e0558b1865bb10ce4a15f 1536 Pfam PF00310 Glutamine amidotransferases class-II 27 447 3.1E-177 T 11-10-2018 IPR017932 Glutamine amidotransferase type 2 domain syc0650_c 6cd38d057b5e0558b1865bb10ce4a15f 1536 SUPERFAMILY SSF69336 1260 1522 1.18E-93 T 11-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 syc0650_c 6cd38d057b5e0558b1865bb10ce4a15f 1536 Gene3D G3DSA:3.20.20.70 499 1225 0.0 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 syc0650_c 6cd38d057b5e0558b1865bb10ce4a15f 1536 Pfam PF04898 Glutamate synthase central domain 474 765 1.1E-111 T 11-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 syc0650_c 6cd38d057b5e0558b1865bb10ce4a15f 1536 SUPERFAMILY SSF51395 467 1255 2.79E-269 T 11-10-2018 syc0650_c 6cd38d057b5e0558b1865bb10ce4a15f 1536 SUPERFAMILY SSF56235 27 450 4.91E-146 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal syc2298_d d2837f42fbb9c9f0a87d333bf6a98348 154 SUPERFAMILY SSF74982 5 134 6.02E-53 T 11-10-2018 IPR023620 Small protein B syc2298_d d2837f42fbb9c9f0a87d333bf6a98348 154 Gene3D G3DSA:2.40.280.10 3 131 7.8E-52 T 11-10-2018 IPR023620 Small protein B syc2298_d d2837f42fbb9c9f0a87d333bf6a98348 154 ProSitePatterns PS01317 SsrA-binding protein. 28 40 - T 11-10-2018 IPR020081 SsrA-binding protein, conserved site syc2298_d d2837f42fbb9c9f0a87d333bf6a98348 154 Hamap MF_00023 SsrA-binding protein [smpB]. 1 154 75.598 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 syc2298_d d2837f42fbb9c9f0a87d333bf6a98348 154 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 12 132 8.0E-66 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 syc2298_d d2837f42fbb9c9f0a87d333bf6a98348 154 Pfam PF01668 SmpB protein 11 152 9.4E-62 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 syc2298_d d2837f42fbb9c9f0a87d333bf6a98348 154 TIGRFAM TIGR00086 smpB: SsrA-binding protein 10 152 4.7E-57 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 syc0559_c 7687b56284d108a6ce1a7ab4eba2b335 460 Gene3D G3DSA:1.20.1250.20 283 458 2.9E-17 T 11-10-2018 syc0559_c 7687b56284d108a6ce1a7ab4eba2b335 460 Pfam PF05977 Transmembrane secretion effector 45 456 7.8E-14 T 11-10-2018 IPR010290 Transmembrane secretion effector syc0559_c 7687b56284d108a6ce1a7ab4eba2b335 460 Gene3D G3DSA:1.20.1250.20 46 261 1.7E-9 T 11-10-2018 syc0559_c 7687b56284d108a6ce1a7ab4eba2b335 460 SUPERFAMILY SSF103473 38 454 9.81E-38 T 11-10-2018 IPR036259 MFS transporter superfamily syc1265_c 9d07a785747d1ae3d2994b1f64a01a27 396 SUPERFAMILY SSF161098 187 388 1.09E-36 T 11-10-2018 IPR035906 MetI-like superfamily syc1265_c 9d07a785747d1ae3d2994b1f64a01a27 396 Gene3D G3DSA:1.10.3720.10 179 393 3.6E-44 T 11-10-2018 IPR035906 MetI-like superfamily syc1265_c 9d07a785747d1ae3d2994b1f64a01a27 396 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 206 393 5.1E-18 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 syc1265_c 9d07a785747d1ae3d2994b1f64a01a27 396 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 188 284 7.7E-21 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 syc2103_c 3553a9ebaf58ebf77e21235bac8e251e 206 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 14 197 8.2E-38 T 11-10-2018 IPR001303 Class II aldolase/adducin N-terminal syc2103_c 3553a9ebaf58ebf77e21235bac8e251e 206 SMART SM01007 9 198 6.0E-46 T 11-10-2018 IPR001303 Class II aldolase/adducin N-terminal syc2103_c 3553a9ebaf58ebf77e21235bac8e251e 206 Hamap MF_01677 Methylthioribulose-1-phosphate dehydratase [mtnB]. 1 206 99.453 T 11-10-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 syc2103_c 3553a9ebaf58ebf77e21235bac8e251e 206 TIGRFAM TIGR03328 salvage_mtnB: methylthioribulose-1-phosphate dehydratase 11 201 6.2E-68 T 11-10-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 syc2103_c 3553a9ebaf58ebf77e21235bac8e251e 206 Gene3D G3DSA:3.40.225.10 3 203 1.5E-44 T 11-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily syc2103_c 3553a9ebaf58ebf77e21235bac8e251e 206 SUPERFAMILY SSF53639 6 201 2.16E-41 T 11-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily syc1013_c e6a3ba46bb0af4530c68d15b941b4597 182 TIGRFAM TIGR00496 frr: ribosome recycling factor 8 182 3.3E-75 T 11-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 syc1013_c e6a3ba46bb0af4530c68d15b941b4597 182 Pfam PF01765 Ribosome recycling factor 19 180 1.8E-63 T 11-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 syc1013_c e6a3ba46bb0af4530c68d15b941b4597 182 Gene3D G3DSA:1.10.132.20 10 179 3.5E-68 T 11-10-2018 syc1013_c e6a3ba46bb0af4530c68d15b941b4597 182 Hamap MF_00040 Ribosome-recycling factor [frr]. 1 182 26.288 T 11-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 syc1013_c e6a3ba46bb0af4530c68d15b941b4597 182 SUPERFAMILY SSF55194 3 181 1.44E-69 T 11-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 syc1013_c e6a3ba46bb0af4530c68d15b941b4597 182 Gene3D G3DSA:3.30.1360.40 28 102 3.5E-68 T 11-10-2018 syc1757_c fe08a967a7c067a445de5fb3929373b8 266 Gene3D G3DSA:3.40.50.1000 117 259 9.7E-14 T 11-10-2018 IPR023214 HAD superfamily syc1757_c fe08a967a7c067a445de5fb3929373b8 266 Pfam PF00702 haloacid dehalogenase-like hydrolase 13 209 1.3E-6 T 11-10-2018 syc1757_c fe08a967a7c067a445de5fb3929373b8 266 TIGRFAM TIGR01548 HAD-SF-IA-hyp1: HAD hydrolase, TIGR01548 family 12 209 5.6E-94 T 11-10-2018 IPR006438 HAD hydrolase, TIGR01548 family KEGG: 00340+4.2.1.19 syc1757_c fe08a967a7c067a445de5fb3929373b8 266 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 125 209 9.6E-8 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 syc1757_c fe08a967a7c067a445de5fb3929373b8 266 SUPERFAMILY SSF56784 13 256 1.72E-28 T 11-10-2018 IPR036412 HAD-like superfamily syc2256_d 3072bbc758e402281a7fe37145acee85 508 PIRSF PIRSF000163 1 508 1.8E-210 T 11-10-2018 IPR016209 Protochlorophyllide reductase, ChlB, light independent GO:0016730|GO:0046148|GO:0055114 KEGG: 00860+1.3.7.7|MetaCyc: PWY-5531|MetaCyc: PWY-7159 syc2256_d 3072bbc758e402281a7fe37145acee85 508 Gene3D G3DSA:3.40.50.1980 158 247 1.9E-37 T 11-10-2018 syc2256_d 3072bbc758e402281a7fe37145acee85 508 Gene3D G3DSA:3.40.50.1980 1 149 1.6E-64 T 11-10-2018 syc2256_d 3072bbc758e402281a7fe37145acee85 508 TIGRFAM TIGR01278 DPOR_BchB: light-independent protochlorophyllide reductase, B subunit 1 506 3.0E-231 T 11-10-2018 IPR005969 Light-independent protochlorophyllide reductase, B subunit GO:0015995|GO:0016730|GO:0019685|GO:0055114 KEGG: 00860+1.3.7.7|MetaCyc: PWY-5531|MetaCyc: PWY-7159 syc2256_d 3072bbc758e402281a7fe37145acee85 508 Gene3D G3DSA:1.20.89.20 248 440 1.3E-96 T 11-10-2018 syc2256_d 3072bbc758e402281a7fe37145acee85 508 Gene3D G3DSA:1.10.8.550 457 508 7.2E-22 T 11-10-2018 syc2256_d 3072bbc758e402281a7fe37145acee85 508 Hamap MF_00353 Light-independent protochlorophyllide reductase subunit B [bchB]. 1 507 52.278 T 11-10-2018 IPR005969 Light-independent protochlorophyllide reductase, B subunit GO:0015995|GO:0016730|GO:0019685|GO:0055114 KEGG: 00860+1.3.7.7|MetaCyc: PWY-5531|MetaCyc: PWY-7159 syc2256_d 3072bbc758e402281a7fe37145acee85 508 Gene3D G3DSA:3.40.50.1980 301 394 1.3E-96 T 11-10-2018 syc2256_d 3072bbc758e402281a7fe37145acee85 508 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 12 426 2.2E-75 T 11-10-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 syc2256_d 3072bbc758e402281a7fe37145acee85 508 Pfam PF08369 Proto-chlorophyllide reductase 57 kD subunit 459 503 6.2E-18 T 11-10-2018 IPR013580 Proto-chlorophyllide/chlorophyllide reductase, C-terminal GO:0015979|GO:0015995|GO:0016491|GO:0055114 KEGG: 00860+1.3.7.7|MetaCyc: PWY-5531|MetaCyc: PWY-7159 syc2256_d 3072bbc758e402281a7fe37145acee85 508 SUPERFAMILY SSF53807 3 446 5.89E-115 T 11-10-2018 syc1747_d 98f604c47cc35711bbfc95a6273f5f75 213 ProSitePatterns PS00042 Crp-type HTH domain signature. 170 193 - T 11-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 syc1747_d 98f604c47cc35711bbfc95a6273f5f75 213 Gene3D G3DSA:1.10.10.10 131 212 1.5E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily syc1747_d 98f604c47cc35711bbfc95a6273f5f75 213 Gene3D G3DSA:2.60.120.10 19 130 1.8E-5 T 11-10-2018 IPR014710 RmlC-like jelly roll fold syc1747_d 98f604c47cc35711bbfc95a6273f5f75 213 Pfam PF13545 Crp-like helix-turn-helix domain 144 208 6.1E-12 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 syc1747_d 98f604c47cc35711bbfc95a6273f5f75 213 SUPERFAMILY SSF46785 141 209 9.87E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily syc1747_d 98f604c47cc35711bbfc95a6273f5f75 213 SMART SM00419 162 211 9.5E-9 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 syc1747_d 98f604c47cc35711bbfc95a6273f5f75 213 SUPERFAMILY SSF51206 34 129 1.27E-9 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like syc0954_d 53e5f2b17ee472c7bb5b6720375d7fce 438 SUPERFAMILY SSF51556 77 393 2.21E-84 T 11-10-2018 IPR032466 Metal-dependent hydrolase syc0954_d 53e5f2b17ee472c7bb5b6720375d7fce 438 Pfam PF07969 Amidohydrolase family 212 411 1.2E-27 T 11-10-2018 IPR013108 Amidohydrolase 3 syc0954_d 53e5f2b17ee472c7bb5b6720375d7fce 438 Pfam PF07969 Amidohydrolase family 68 197 3.2E-9 T 11-10-2018 IPR013108 Amidohydrolase 3 syc0954_d 53e5f2b17ee472c7bb5b6720375d7fce 438 Gene3D G3DSA:2.30.40.10 41 425 8.9E-93 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 syc0954_d 53e5f2b17ee472c7bb5b6720375d7fce 438 SUPERFAMILY SSF51338 35 405 2.47E-9 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 syc0954_d 53e5f2b17ee472c7bb5b6720375d7fce 438 Gene3D G3DSA:3.20.20.140 78 381 8.9E-93 T 11-10-2018 syc1816_d 4e922682c38ee6b4319af8f7d91636a9 303 Pfam PF12697 Alpha/beta hydrolase family 57 293 6.4E-20 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 syc1816_d 4e922682c38ee6b4319af8f7d91636a9 303 Gene3D G3DSA:3.40.50.1820 23 301 7.8E-56 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold syc1816_d 4e922682c38ee6b4319af8f7d91636a9 303 PRINTS PR00111 Alpha/beta hydrolase fold signature 139 152 1.4E-14 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 syc1816_d 4e922682c38ee6b4319af8f7d91636a9 303 PRINTS PR00111 Alpha/beta hydrolase fold signature 244 258 1.4E-14 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 syc1816_d 4e922682c38ee6b4319af8f7d91636a9 303 PRINTS PR00111 Alpha/beta hydrolase fold signature 125 138 1.4E-14 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 syc1816_d 4e922682c38ee6b4319af8f7d91636a9 303 PRINTS PR00111 Alpha/beta hydrolase fold signature 80 95 1.4E-14 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 syc1816_d 4e922682c38ee6b4319af8f7d91636a9 303 PRINTS PR00412 Epoxide hydrolase signature 275 297 1.1E-6 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 syc1816_d 4e922682c38ee6b4319af8f7d91636a9 303 PRINTS PR00412 Epoxide hydrolase signature 139 152 1.1E-6 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 syc1816_d 4e922682c38ee6b4319af8f7d91636a9 303 PRINTS PR00412 Epoxide hydrolase signature 61 79 1.1E-6 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 syc1816_d 4e922682c38ee6b4319af8f7d91636a9 303 SUPERFAMILY SSF53474 44 299 4.56E-57 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold syc1798_c df8c9e9e6cffd83b3e121b937856e197 263 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 1 258 2.2E-96 T 11-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 syc1798_c df8c9e9e6cffd83b3e121b937856e197 263 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 34 47 - T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 syc1798_c df8c9e9e6cffd83b3e121b937856e197 263 SUPERFAMILY SSF51717 1 261 7.2E-100 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 syc1798_c df8c9e9e6cffd83b3e121b937856e197 263 Gene3D G3DSA:3.20.20.20 1 263 2.2E-114 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 syc1798_c df8c9e9e6cffd83b3e121b937856e197 263 Pfam PF00809 Pterin binding enzyme 1 244 9.7E-90 T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 syc1012_c ec62e20e66c787b2121b7ab079cfc856 376 Pfam PF13450 NAD(P)-binding Rossmann-like domain 6 33 1.3E-5 T 11-10-2018 syc1012_c ec62e20e66c787b2121b7ab079cfc856 376 SUPERFAMILY SSF51905 2 330 1.24E-41 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc1012_c ec62e20e66c787b2121b7ab079cfc856 376 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 254 269 1.6E-9 T 11-10-2018 syc1012_c ec62e20e66c787b2121b7ab079cfc856 376 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 3 25 1.6E-9 T 11-10-2018 syc1012_c ec62e20e66c787b2121b7ab079cfc856 376 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 137 152 1.6E-9 T 11-10-2018 syc1012_c ec62e20e66c787b2121b7ab079cfc856 376 TIGRFAM TIGR02032 GG-red-SF: geranylgeranyl reductase family 3 289 3.0E-65 T 11-10-2018 IPR011777 Geranylgeranyl reductase family GO:0016628|GO:0055114 syc1012_c ec62e20e66c787b2121b7ab079cfc856 376 Gene3D G3DSA:3.50.50.60 2 369 3.4E-65 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc1028_d c4e967b0dc657bef337f4ed2036473cc 315 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 16 306 8.1E-88 T 11-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 syc1028_d c4e967b0dc657bef337f4ed2036473cc 315 Pfam PF06574 FAD synthetase 13 163 8.9E-44 T 11-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 syc1028_d c4e967b0dc657bef337f4ed2036473cc 315 SUPERFAMILY SSF82114 171 309 2.18E-41 T 11-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 syc1028_d c4e967b0dc657bef337f4ed2036473cc 315 PIRSF PIRSF004491 2 314 1.2E-95 T 11-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 syc1028_d c4e967b0dc657bef337f4ed2036473cc 315 Pfam PF01687 Riboflavin kinase 181 307 7.1E-39 T 11-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 syc1028_d c4e967b0dc657bef337f4ed2036473cc 315 SUPERFAMILY SSF52374 14 174 2.28E-29 T 11-10-2018 syc1028_d c4e967b0dc657bef337f4ed2036473cc 315 Gene3D G3DSA:2.40.30.30 183 314 8.9E-42 T 11-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 syc1028_d c4e967b0dc657bef337f4ed2036473cc 315 SMART SM00904 180 308 4.8E-56 T 11-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 syc1028_d c4e967b0dc657bef337f4ed2036473cc 315 Gene3D G3DSA:3.40.50.620 3 182 1.2E-54 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold syc1248_d a38d6fcd36aae5b117758c95346e9246 91 Pfam PF11341 Protein of unknown function (DUF3143) 26 90 9.2E-23 T 11-10-2018 IPR021489 Protein of unknown function DUF3143 syc1555_d 3a5785b45662ea34f36954fd9e945e9f 476 ProSitePatterns PS00508 Nickel-dependent hydrogenases large subunit signature 2. 441 450 - T 11-10-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 syc1555_d 3a5785b45662ea34f36954fd9e945e9f 476 SUPERFAMILY SSF56762 1 450 1.7E-128 T 11-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc1555_d 3a5785b45662ea34f36954fd9e945e9f 476 Pfam PF00374 Nickel-dependent hydrogenase 40 118 5.4E-18 T 11-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 syc1555_d 3a5785b45662ea34f36954fd9e945e9f 476 Pfam PF00374 Nickel-dependent hydrogenase 271 450 5.5E-8 T 11-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 syc1555_d 3a5785b45662ea34f36954fd9e945e9f 476 Gene3D G3DSA:1.10.645.10 1 450 8.4E-93 T 11-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc1720_c 4d3c938726de2df78d3bed0cf9f810d4 340 Pfam PF01180 Dihydroorotate dehydrogenase 92 290 6.9E-16 T 11-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 syc1720_c 4d3c938726de2df78d3bed0cf9f810d4 340 Gene3D G3DSA:3.20.20.70 3 295 4.1E-53 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 syc1720_c 4d3c938726de2df78d3bed0cf9f810d4 340 SUPERFAMILY SSF51395 1 307 1.83E-54 T 11-10-2018 syc1720_c 4d3c938726de2df78d3bed0cf9f810d4 340 PIRSF PIRSF000164 1 308 7.3E-38 T 11-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 syc1277_c 296190f57ac56b2dca7179861b8d0b27 179 SMART SM00100 1 103 3.5E-6 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain syc1277_c 296190f57ac56b2dca7179861b8d0b27 179 Pfam PF00027 Cyclic nucleotide-binding domain 5 90 3.9E-19 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain syc1277_c 296190f57ac56b2dca7179861b8d0b27 179 Gene3D G3DSA:2.60.120.10 1 115 4.6E-23 T 11-10-2018 IPR014710 RmlC-like jelly roll fold syc1277_c 296190f57ac56b2dca7179861b8d0b27 179 SUPERFAMILY SSF51206 3 107 2.36E-22 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like syc0318_d 5ef10afb4f375e127a6a80a63c7e6f84 179 Hamap MF_01335 Cytochrome b6-f complex iron-sulfur subunit [petC]. 2 179 45.503 T 11-10-2018 IPR023960 Cytochrome b6-f complex iron-sulfur subunit GO:0009496|GO:0015979|GO:0016020|GO:0045158|GO:0055114 KEGG: 00195+1.10.9.1|MetaCyc: PWY-101 syc0318_d 5ef10afb4f375e127a6a80a63c7e6f84 179 Gene3D G3DSA:2.102.10.10 45 179 3.8E-47 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 syc0318_d 5ef10afb4f375e127a6a80a63c7e6f84 179 PRINTS PR00162 Rieske 2Fe-2S subunit signature 103 114 8.4E-15 T 11-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 syc0318_d 5ef10afb4f375e127a6a80a63c7e6f84 179 PRINTS PR00162 Rieske 2Fe-2S subunit signature 124 136 8.4E-15 T 11-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 syc0318_d 5ef10afb4f375e127a6a80a63c7e6f84 179 PRINTS PR00162 Rieske 2Fe-2S subunit signature 136 148 8.4E-15 T 11-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 syc0318_d 5ef10afb4f375e127a6a80a63c7e6f84 179 Gene3D G3DSA:1.20.5.700 1 44 1.7E-27 T 11-10-2018 syc0318_d 5ef10afb4f375e127a6a80a63c7e6f84 179 Pfam PF08802 Cytochrome B6-F complex Fe-S subunit 9 46 1.5E-19 T 11-10-2018 IPR014909 Cytochrome b6-f complex Fe-S subunit GO:0009496|GO:0042651|GO:0051537|GO:0055114 KEGG: 00195+1.10.9.1|MetaCyc: PWY-101 syc0318_d 5ef10afb4f375e127a6a80a63c7e6f84 179 SUPERFAMILY SSF50022 10 178 5.8E-38 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 syc0318_d 5ef10afb4f375e127a6a80a63c7e6f84 179 Pfam PF00355 Rieske [2Fe-2S] domain 102 148 3.5E-12 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 syc1122_c 9cb9f6baf2d9cdbf82c4d755d707ce66 227 Pfam PF11209 Protein of unknown function (DUF2993) 5 219 2.1E-26 T 11-10-2018 IPR021373 Protein of unknown function DUF2993 syc0148_c 3b73d0a177bf0270e1063aab7e156ccc 543 SUPERFAMILY SSF161098 281 533 1.85E-39 T 11-10-2018 IPR035906 MetI-like superfamily syc0148_c 3b73d0a177bf0270e1063aab7e156ccc 543 Gene3D G3DSA:1.10.3720.10 6 264 4.2E-52 T 11-10-2018 IPR035906 MetI-like superfamily syc0148_c 3b73d0a177bf0270e1063aab7e156ccc 543 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 253 1.1E-16 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 syc0148_c 3b73d0a177bf0270e1063aab7e156ccc 543 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 341 529 1.0E-7 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 syc0148_c 3b73d0a177bf0270e1063aab7e156ccc 543 SUPERFAMILY SSF161098 5 261 3.27E-44 T 11-10-2018 IPR035906 MetI-like superfamily syc0148_c 3b73d0a177bf0270e1063aab7e156ccc 543 Gene3D G3DSA:1.10.3720.10 282 541 3.2E-37 T 11-10-2018 IPR035906 MetI-like superfamily syc1671_c 69e219226f73597e78913e1df76700e2 206 SUPERFAMILY SSF53335 4 201 3.82E-19 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase syc1671_c 69e219226f73597e78913e1df76700e2 206 Gene3D G3DSA:3.40.50.150 3 203 4.1E-12 T 11-10-2018 syc1671_c 69e219226f73597e78913e1df76700e2 206 Pfam PF06080 Protein of unknown function (DUF938) 5 203 1.7E-71 T 11-10-2018 IPR010342 Protein of unknown function DUF938 syc1322_d dffaf8047b57599d90b1412f6dd8e3df 534 Pfam PF00958 GMP synthase C terminal domain 443 533 2.1E-44 T 11-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 syc1322_d dffaf8047b57599d90b1412f6dd8e3df 534 PRINTS PR00097 Anthranilate synthase component II signature 180 193 9.1E-7 T 11-10-2018 syc1322_d dffaf8047b57599d90b1412f6dd8e3df 534 PRINTS PR00097 Anthranilate synthase component II signature 65 74 9.1E-7 T 11-10-2018 syc1322_d dffaf8047b57599d90b1412f6dd8e3df 534 PRINTS PR00097 Anthranilate synthase component II signature 92 103 9.1E-7 T 11-10-2018 syc1322_d dffaf8047b57599d90b1412f6dd8e3df 534 SUPERFAMILY SSF52317 18 240 1.12E-55 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like syc1322_d dffaf8047b57599d90b1412f6dd8e3df 534 PRINTS PR00096 Glutamine amidotransferase superfamily signature 65 74 2.9E-8 T 11-10-2018 syc1322_d dffaf8047b57599d90b1412f6dd8e3df 534 PRINTS PR00096 Glutamine amidotransferase superfamily signature 92 103 2.9E-8 T 11-10-2018 syc1322_d dffaf8047b57599d90b1412f6dd8e3df 534 PRINTS PR00096 Glutamine amidotransferase superfamily signature 180 193 2.9E-8 T 11-10-2018 syc1322_d dffaf8047b57599d90b1412f6dd8e3df 534 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 18 534 55.724 T 11-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 syc1322_d dffaf8047b57599d90b1412f6dd8e3df 534 SUPERFAMILY SSF52402 200 427 2.43E-56 T 11-10-2018 syc1322_d dffaf8047b57599d90b1412f6dd8e3df 534 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 216 534 2.2E-152 T 11-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 syc1322_d dffaf8047b57599d90b1412f6dd8e3df 534 SUPERFAMILY SSF54810 414 534 9.68E-53 T 11-10-2018 syc1322_d dffaf8047b57599d90b1412f6dd8e3df 534 Gene3D G3DSA:3.40.50.620 213 414 1.7E-74 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold syc1322_d dffaf8047b57599d90b1412f6dd8e3df 534 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 62 76 4.4E-5 T 11-10-2018 syc1322_d dffaf8047b57599d90b1412f6dd8e3df 534 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 92 108 4.4E-5 T 11-10-2018 syc1322_d dffaf8047b57599d90b1412f6dd8e3df 534 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 21 35 4.4E-5 T 11-10-2018 syc1322_d dffaf8047b57599d90b1412f6dd8e3df 534 Pfam PF00117 Glutamine amidotransferase class-I 23 203 3.8E-42 T 11-10-2018 IPR017926 Glutamine amidotransferase syc1322_d dffaf8047b57599d90b1412f6dd8e3df 534 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 22 208 7.8E-80 T 11-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 syc1322_d dffaf8047b57599d90b1412f6dd8e3df 534 Gene3D G3DSA:3.40.50.880 18 212 3.4E-55 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like syc1322_d dffaf8047b57599d90b1412f6dd8e3df 534 Gene3D G3DSA:3.30.300.10 415 534 7.7E-55 T 11-10-2018 syc2124_d 1c7821181625d673ba7473b0b93f53da 255 SMART SM00028 127 160 1.0E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc2124_d 1c7821181625d673ba7473b0b93f53da 255 SMART SM00028 93 126 6.2E-6 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc2124_d 1c7821181625d673ba7473b0b93f53da 255 SMART SM00028 59 92 7.8E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc2124_d 1c7821181625d673ba7473b0b93f53da 255 SMART SM00028 25 58 15.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc2124_d 1c7821181625d673ba7473b0b93f53da 255 Gene3D G3DSA:1.25.40.10 24 116 3.5E-22 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc2124_d 1c7821181625d673ba7473b0b93f53da 255 Pfam PF13174 Tetratricopeptide repeat 167 193 0.041 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc2124_d 1c7821181625d673ba7473b0b93f53da 255 SUPERFAMILY SSF48452 26 228 2.4E-40 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc2124_d 1c7821181625d673ba7473b0b93f53da 255 Gene3D G3DSA:1.25.40.10 168 240 2.6E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc2124_d 1c7821181625d673ba7473b0b93f53da 255 Pfam PF13414 TPR repeat 66 102 2.1E-8 T 11-10-2018 syc2124_d 1c7821181625d673ba7473b0b93f53da 255 Pfam PF13414 TPR repeat 107 141 1.6E-9 T 11-10-2018 syc2124_d 1c7821181625d673ba7473b0b93f53da 255 Gene3D G3DSA:1.25.40.10 117 167 3.9E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc1719_c 856888529e6d66ccaf5260642087682a 367 Gene3D G3DSA:3.40.50.11740 59 297 2.9E-108 T 11-10-2018 syc1719_c 856888529e6d66ccaf5260642087682a 367 Gene3D G3DSA:1.10.10.2140 313 363 1.1E-21 T 11-10-2018 syc1719_c 856888529e6d66ccaf5260642087682a 367 Gene3D G3DSA:3.40.50.11750 19 257 2.9E-108 T 11-10-2018 syc1719_c 856888529e6d66ccaf5260642087682a 367 Pfam PF01924 Hydrogenase formation hypA family 13 361 1.2E-148 T 11-10-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 syc1719_c 856888529e6d66ccaf5260642087682a 367 TIGRFAM TIGR00075 hypD: hydrogenase expression/formation protein HypD 3 363 5.1E-146 T 11-10-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 syc1719_c 856888529e6d66ccaf5260642087682a 367 PIRSF PIRSF005622 1 366 2.7E-159 T 11-10-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 syc1724_c c98d1882818cbc9152e25a21e36c4ce0 268 Pfam PF02548 Ketopantoate hydroxymethyltransferase 3 256 3.3E-105 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 syc1724_c c98d1882818cbc9152e25a21e36c4ce0 268 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 3 267 40.94 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 syc1724_c c98d1882818cbc9152e25a21e36c4ce0 268 SUPERFAMILY SSF51621 3 258 2.55E-95 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 syc1724_c c98d1882818cbc9152e25a21e36c4ce0 268 PIRSF PIRSF000388 1 264 7.6E-99 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 syc1724_c c98d1882818cbc9152e25a21e36c4ce0 268 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 3 259 1.2E-105 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 syc1724_c c98d1882818cbc9152e25a21e36c4ce0 268 Gene3D G3DSA:3.20.20.60 2 265 1.1E-104 T 11-10-2018 syc1854_d e6b19ce85df03dbeb6646c4b1717c81a 181 Gene3D G3DSA:3.40.50.960 1 159 7.9E-56 T 11-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 syc1854_d e6b19ce85df03dbeb6646c4b1717c81a 181 SUPERFAMILY SSF52121 6 158 4.06E-56 T 11-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 syc1854_d e6b19ce85df03dbeb6646c4b1717c81a 181 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 153 5.7E-52 T 11-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 syc1854_d e6b19ce85df03dbeb6646c4b1717c81a 181 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 9 157 29.578 T 11-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 syc1854_d e6b19ce85df03dbeb6646c4b1717c81a 181 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 14 154 3.7E-52 T 11-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 syc0656_d 1f5755ad72473de7d98fd132a92bd490 409 Gene3D G3DSA:2.40.30.10 311 408 1.5E-37 T 11-10-2018 syc0656_d 1f5755ad72473de7d98fd132a92bd490 409 Pfam PF03143 Elongation factor Tu C-terminal domain 308 407 6.3E-34 T 11-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal syc0656_d 1f5755ad72473de7d98fd132a92bd490 409 Gene3D G3DSA:2.40.30.10 216 310 1.4E-37 T 11-10-2018 syc0656_d 1f5755ad72473de7d98fd132a92bd490 409 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 408 2.5E-229 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 syc0656_d 1f5755ad72473de7d98fd132a92bd490 409 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.1E-14 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 syc0656_d 1f5755ad72473de7d98fd132a92bd490 409 Pfam PF00009 Elongation factor Tu GTP binding domain 10 211 2.5E-58 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 syc0656_d 1f5755ad72473de7d98fd132a92bd490 409 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.5E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 syc0656_d 1f5755ad72473de7d98fd132a92bd490 409 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.5E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 syc0656_d 1f5755ad72473de7d98fd132a92bd490 409 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.5E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 syc0656_d 1f5755ad72473de7d98fd132a92bd490 409 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.5E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 syc0656_d 1f5755ad72473de7d98fd132a92bd490 409 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.5E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 syc0656_d 1f5755ad72473de7d98fd132a92bd490 409 SUPERFAMILY SSF50465 308 408 4.6E-33 T 11-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal syc0656_d 1f5755ad72473de7d98fd132a92bd490 409 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site syc0656_d 1f5755ad72473de7d98fd132a92bd490 409 SUPERFAMILY SSF52540 9 236 1.14E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0656_d 1f5755ad72473de7d98fd132a92bd490 409 Pfam PF03144 Elongation factor Tu domain 2 235 303 4.0E-18 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 syc0656_d 1f5755ad72473de7d98fd132a92bd490 409 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 409 61.149 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 syc0656_d 1f5755ad72473de7d98fd132a92bd490 409 Gene3D G3DSA:3.40.50.300 1 213 4.8E-69 T 11-10-2018 syc0656_d 1f5755ad72473de7d98fd132a92bd490 409 SUPERFAMILY SSF50447 215 311 5.3E-31 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily syc1565_c 065a5b7bf694879ab1613f8b4f0d67fe 392 Gene3D G3DSA:3.40.640.10 62 284 6.6E-147 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 syc1565_c 065a5b7bf694879ab1613f8b4f0d67fe 392 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 234 247 - T 11-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 syc1565_c 065a5b7bf694879ab1613f8b4f0d67fe 392 SUPERFAMILY SSF53383 1 383 3.67E-119 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase syc1565_c 065a5b7bf694879ab1613f8b4f0d67fe 392 Pfam PF00155 Aminotransferase class I and II 32 380 2.3E-72 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 syc1565_c 065a5b7bf694879ab1613f8b4f0d67fe 392 Gene3D G3DSA:3.90.1150.10 25 380 6.6E-147 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 syc0791_c 21b88e429670beacbabbe58af524667f 279 Pfam PF04865 Baseplate J-like protein 97 236 7.4E-18 T 11-10-2018 IPR006949 Baseplate protein J-like syc0791_c 21b88e429670beacbabbe58af524667f 279 PIRSF PIRSF020481 1 279 1.1E-74 T 11-10-2018 IPR014507 Baseplate assembly protein J, predicted syc0703_d 0ab32b7555c19786a7bd88297e230f83 216 SUPERFAMILY SSF55729 63 211 5.61E-28 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase syc0703_d 0ab32b7555c19786a7bd88297e230f83 216 TIGRFAM TIGR04045 MSMEG_0567_GNAT: putative N-acetyltransferase, MSMEG_0567 N-terminal domain family 53 205 4.3E-69 T 11-10-2018 IPR024035 GNAT N-acetyltransferase, putative syc0703_d 0ab32b7555c19786a7bd88297e230f83 216 Gene3D G3DSA:3.40.630.30 62 200 1.1E-18 T 11-10-2018 syc0703_d 0ab32b7555c19786a7bd88297e230f83 216 Pfam PF00583 Acetyltransferase (GNAT) family 100 178 4.3E-7 T 11-10-2018 IPR000182 GNAT domain syc0449_d 822bfb0a4a2320a3165d304bd1881262 482 SMART SM00760 386 455 1.5E-40 T 11-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 syc0449_d 822bfb0a4a2320a3165d304bd1881262 482 Pfam PF11638 DnaA N-terminal domain 27 88 4.9E-18 T 11-10-2018 IPR024633 DnaA N-terminal domain syc0449_d 822bfb0a4a2320a3165d304bd1881262 482 Gene3D G3DSA:1.10.8.60 311 377 5.9E-21 T 11-10-2018 syc0449_d 822bfb0a4a2320a3165d304bd1881262 482 Gene3D G3DSA:1.10.1750.10 378 479 2.3E-33 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 syc0449_d 822bfb0a4a2320a3165d304bd1881262 482 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 276 303 1.5E-47 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like syc0449_d 822bfb0a4a2320a3165d304bd1881262 482 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 436 455 1.5E-47 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like syc0449_d 822bfb0a4a2320a3165d304bd1881262 482 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 242 256 1.5E-47 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like syc0449_d 822bfb0a4a2320a3165d304bd1881262 482 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 210 224 1.5E-47 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like syc0449_d 822bfb0a4a2320a3165d304bd1881262 482 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 178 198 1.5E-47 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like syc0449_d 822bfb0a4a2320a3165d304bd1881262 482 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 26 477 31.981 T 11-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 syc0449_d 822bfb0a4a2320a3165d304bd1881262 482 SUPERFAMILY SSF52540 144 357 1.03E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0449_d 822bfb0a4a2320a3165d304bd1881262 482 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 387 455 3.2E-30 T 11-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 syc0449_d 822bfb0a4a2320a3165d304bd1881262 482 Gene3D G3DSA:3.30.300.180 20 101 6.7E-21 T 11-10-2018 IPR038454 DnaA, N-terminal domain superfamily syc0449_d 822bfb0a4a2320a3165d304bd1881262 482 SMART SM00382 177 310 3.4E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain syc0449_d 822bfb0a4a2320a3165d304bd1881262 482 ProSitePatterns PS01008 DnaA protein signature. 436 455 - T 11-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 syc0449_d 822bfb0a4a2320a3165d304bd1881262 482 Pfam PF00308 Bacterial dnaA protein 145 361 2.4E-89 T 11-10-2018 IPR013317 Chromosomal replication initiator protein DnaA syc0449_d 822bfb0a4a2320a3165d304bd1881262 482 SUPERFAMILY SSF48295 379 476 1.52E-33 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 syc0449_d 822bfb0a4a2320a3165d304bd1881262 482 Gene3D G3DSA:3.40.50.300 136 309 8.4E-47 T 11-10-2018 syc0449_d 822bfb0a4a2320a3165d304bd1881262 482 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 29 476 1.2E-160 T 11-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 syc0295_c 1f1078061057512e560147dc51f2f2d1 184 SUPERFAMILY SSF52833 1 78 5.38E-26 T 11-10-2018 IPR036249 Thioredoxin-like superfamily syc0295_c 1f1078061057512e560147dc51f2f2d1 184 Gene3D G3DSA:3.40.30.10 1 78 1.6E-28 T 11-10-2018 syc0295_c 1f1078061057512e560147dc51f2f2d1 184 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 74 2.0E-19 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 syc0295_c 1f1078061057512e560147dc51f2f2d1 184 SUPERFAMILY SSF47616 71 182 4.46E-22 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily syc0295_c 1f1078061057512e560147dc51f2f2d1 184 Pfam PF00043 Glutathione S-transferase, C-terminal domain 111 175 9.6E-8 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal syc0295_c 1f1078061057512e560147dc51f2f2d1 184 Gene3D G3DSA:1.20.1050.10 80 184 4.5E-19 T 11-10-2018 syc1632_c 5f6048e63b51d7f86b061e3e5c009846 518 SMART SM00382 314 506 1.8E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain syc1632_c 5f6048e63b51d7f86b061e3e5c009846 518 Gene3D G3DSA:3.40.50.300 312 505 7.0E-101 T 11-10-2018 syc1632_c 5f6048e63b51d7f86b061e3e5c009846 518 Gene3D G3DSA:1.20.120.140 216 515 7.0E-101 T 11-10-2018 syc1632_c 5f6048e63b51d7f86b061e3e5c009846 518 SUPERFAMILY SSF47364 212 289 1.0E-14 T 11-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 syc1632_c 5f6048e63b51d7f86b061e3e5c009846 518 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 490 503 - T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 syc1632_c 5f6048e63b51d7f86b061e3e5c009846 518 SUPERFAMILY SSF52540 263 515 3.06E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc1632_c 5f6048e63b51d7f86b061e3e5c009846 518 SMART SM00962 315 517 2.2E-104 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 syc1632_c 5f6048e63b51d7f86b061e3e5c009846 518 Pfam PF02881 SRP54-type protein, helical bundle domain 228 290 5.2E-8 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 syc1632_c 5f6048e63b51d7f86b061e3e5c009846 518 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 244 516 2.2E-102 T 11-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 syc1632_c 5f6048e63b51d7f86b061e3e5c009846 518 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 240 517 56.897 T 11-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 syc1632_c 5f6048e63b51d7f86b061e3e5c009846 518 SMART SM00963 217 296 1.2E-13 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 syc1632_c 5f6048e63b51d7f86b061e3e5c009846 518 Pfam PF00448 SRP54-type protein, GTPase domain 316 516 1.8E-71 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 syc1881_d 45b5e62cdfd875e84981c1a92b47477e 180 Pfam PF00333 Ribosomal protein S5, N-terminal domain 25 89 2.1E-22 T 11-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 syc1881_d 45b5e62cdfd875e84981c1a92b47477e 180 Pfam PF03719 Ribosomal protein S5, C-terminal domain 102 172 3.8E-27 T 11-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 syc1881_d 45b5e62cdfd875e84981c1a92b47477e 180 SUPERFAMILY SSF54211 95 173 2.25E-23 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold syc1881_d 45b5e62cdfd875e84981c1a92b47477e 180 ProSitePatterns PS00585 Ribosomal protein S5 signature. 42 74 - T 11-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site syc1881_d 45b5e62cdfd875e84981c1a92b47477e 180 Gene3D G3DSA:3.30.230.10 90 180 4.3E-33 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup syc1881_d 45b5e62cdfd875e84981c1a92b47477e 180 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 178 33.882 T 11-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 syc1881_d 45b5e62cdfd875e84981c1a92b47477e 180 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 22 177 2.4E-64 T 11-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 syc1881_d 45b5e62cdfd875e84981c1a92b47477e 180 SUPERFAMILY SSF54768 22 90 1.99E-19 T 11-10-2018 syc1881_d 45b5e62cdfd875e84981c1a92b47477e 180 Gene3D G3DSA:3.30.160.20 15 87 2.3E-27 T 11-10-2018 syc0537_d 508e90f943684d311c77c13810059b42 284 PIRSF PIRSF036480 3 284 2.2E-112 T 11-10-2018 syc0537_d 508e90f943684d311c77c13810059b42 284 Pfam PF00551 Formyl transferase 94 265 5.3E-37 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 syc0537_d 508e90f943684d311c77c13810059b42 284 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 3 283 47.57 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 syc0537_d 508e90f943684d311c77c13810059b42 284 SUPERFAMILY SSF53328 90 283 2.49E-61 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 syc0537_d 508e90f943684d311c77c13810059b42 284 Gene3D G3DSA:3.40.50.170 90 284 2.1E-69 T 11-10-2018 syc0537_d 508e90f943684d311c77c13810059b42 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 90 112 3.3E-62 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 syc0537_d 508e90f943684d311c77c13810059b42 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 257 282 3.3E-62 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 syc0537_d 508e90f943684d311c77c13810059b42 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 8 34 3.3E-62 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 syc0537_d 508e90f943684d311c77c13810059b42 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 112 139 3.3E-62 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 syc0537_d 508e90f943684d311c77c13810059b42 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 40 52 3.3E-62 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 syc0537_d 508e90f943684d311c77c13810059b42 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 235 257 3.3E-62 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 syc0537_d 508e90f943684d311c77c13810059b42 284 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 7 283 1.3E-124 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 syc0537_d 508e90f943684d311c77c13810059b42 284 Gene3D G3DSA:3.30.70.260 3 88 4.3E-21 T 11-10-2018 syc0537_d 508e90f943684d311c77c13810059b42 284 SUPERFAMILY SSF55021 5 87 3.33E-14 T 11-10-2018 syc0501_c a74aed56eac5f4f9b9ab85d7b4e2526a 173 PIRSF PIRSF000081 2 173 6.1E-62 T 11-10-2018 IPR012128 Phycobilisome, alpha/beta subunit GO:0015979|GO:0030089 syc0501_c a74aed56eac5f4f9b9ab85d7b4e2526a 173 TIGRFAM TIGR01339 phycocy_beta: phycocyanin, beta subunit 3 173 9.7E-98 T 11-10-2018 IPR006247 Phycocyanin, beta subunit GO:0015979|GO:0030089 syc0501_c a74aed56eac5f4f9b9ab85d7b4e2526a 173 Gene3D G3DSA:1.10.490.20 1 173 2.9E-78 T 11-10-2018 IPR038719 Phycobilisome, alpha/beta subunit superfamily syc0501_c a74aed56eac5f4f9b9ab85d7b4e2526a 173 SUPERFAMILY SSF46458 3 171 2.0E-60 T 11-10-2018 IPR009050 Globin-like superfamily syc0501_c a74aed56eac5f4f9b9ab85d7b4e2526a 173 Pfam PF00502 Phycobilisome protein 8 171 4.2E-60 T 11-10-2018 IPR012128 Phycobilisome, alpha/beta subunit GO:0015979|GO:0030089 syc1367_c e50c17bbdd258ebeccad062368bfa968 200 Pfam PF01551 Peptidase family M23 74 184 1.2E-16 T 11-10-2018 IPR016047 Peptidase M23 syc1367_c e50c17bbdd258ebeccad062368bfa968 200 Gene3D G3DSA:2.70.70.10 46 188 6.4E-29 T 11-10-2018 IPR011055 Duplicated hybrid motif syc1367_c e50c17bbdd258ebeccad062368bfa968 200 SUPERFAMILY SSF51261 42 186 9.94E-33 T 11-10-2018 IPR011055 Duplicated hybrid motif syc1706_d 100b307af10b63d5bde43f8bc652e35a 392 SUPERFAMILY SSF55729 9 159 5.21E-8 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase syc1706_d 100b307af10b63d5bde43f8bc652e35a 392 Gene3D G3DSA:3.40.630.30 3 161 4.4E-7 T 11-10-2018 syc1706_d 100b307af10b63d5bde43f8bc652e35a 392 SUPERFAMILY SSF55729 113 330 9.27E-17 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase syc1585_c 0fc362db76a01f2a0244f1f750db6866 474 Gene3D G3DSA:3.10.50.40 159 258 5.8E-67 T 11-10-2018 syc1585_c 0fc362db76a01f2a0244f1f750db6866 474 TIGRFAM TIGR00115 tig: trigger factor 14 425 2.9E-116 T 11-10-2018 IPR005215 Trigger factor GO:0015031 syc1585_c 0fc362db76a01f2a0244f1f750db6866 474 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 273 425 1.3E-30 T 11-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 syc1585_c 0fc362db76a01f2a0244f1f750db6866 474 Hamap MF_00303 Trigger factor [tig]. 3 432 19.414 T 11-10-2018 IPR005215 Trigger factor GO:0015031 syc1585_c 0fc362db76a01f2a0244f1f750db6866 474 SUPERFAMILY SSF54534 143 259 1.45E-22 T 11-10-2018 syc1585_c 0fc362db76a01f2a0244f1f750db6866 474 Gene3D G3DSA:1.10.3120.10 125 427 5.8E-67 T 11-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 syc1585_c 0fc362db76a01f2a0244f1f750db6866 474 SUPERFAMILY SSF109998 260 440 1.14E-31 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily syc1585_c 0fc362db76a01f2a0244f1f750db6866 474 PIRSF PIRSF003095 3 458 3.5E-111 T 11-10-2018 IPR005215 Trigger factor GO:0015031 syc1585_c 0fc362db76a01f2a0244f1f750db6866 474 Gene3D G3DSA:3.30.70.1050 1 124 6.8E-24 T 11-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 syc1585_c 0fc362db76a01f2a0244f1f750db6866 474 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 167 249 3.5E-10 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain syc1585_c 0fc362db76a01f2a0244f1f750db6866 474 Pfam PF05697 Bacterial trigger factor protein (TF) 4 151 1.3E-30 T 11-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 syc1585_c 0fc362db76a01f2a0244f1f750db6866 474 SUPERFAMILY SSF102735 4 138 3.4E-27 T 11-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 syc1541_d 202e1949e078153490f1b8e3ce454928 240 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 7 239 36.885 T 11-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 syc1541_d 202e1949e078153490f1b8e3ce454928 240 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 9 233 4.9E-40 T 11-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 syc1541_d 202e1949e078153490f1b8e3ce454928 240 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 60 73 - T 11-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 syc1541_d 202e1949e078153490f1b8e3ce454928 240 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 11 234 9.1E-54 T 11-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 syc1541_d 202e1949e078153490f1b8e3ce454928 240 Gene3D G3DSA:3.20.20.70 5 239 8.4E-79 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 syc1541_d 202e1949e078153490f1b8e3ce454928 240 SUPERFAMILY SSF51366 7 237 4.42E-67 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 syc1541_d 202e1949e078153490f1b8e3ce454928 240 SMART SM00934 9 234 4.5E-83 T 11-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 syc2204_c fac652f32709fa9501b6ea72bb2889f3 186 Gene3D G3DSA:3.40.50.1010 3 165 1.2E-46 T 11-10-2018 syc2204_c fac652f32709fa9501b6ea72bb2889f3 186 Pfam PF01936 NYN domain 7 161 4.6E-33 T 11-10-2018 IPR021139 NYN domain, limkain-b1-type syc1240_c cddc178b513910967d8093944843537b 209 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 11 207 27.039 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 syc1240_c cddc178b513910967d8093944843537b 209 Pfam PF01121 Dephospho-CoA kinase 14 188 3.4E-62 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 syc1240_c cddc178b513910967d8093944843537b 209 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 14 193 3.8E-60 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 syc1240_c cddc178b513910967d8093944843537b 209 SUPERFAMILY SSF52540 13 203 4.99E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc1240_c cddc178b513910967d8093944843537b 209 Gene3D G3DSA:3.40.50.300 4 207 1.3E-71 T 11-10-2018 syc0377_c 36e522ee78c9d327f26b1b9a50f8b50d 422 Pfam PF00535 Glycosyl transferase family 2 205 321 4.4E-18 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 syc0377_c 36e522ee78c9d327f26b1b9a50f8b50d 422 Gene3D G3DSA:3.90.550.10 1 223 2.0E-72 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases syc0377_c 36e522ee78c9d327f26b1b9a50f8b50d 422 TIGRFAM TIGR04282 glyco_like_cofC: transferase 1, rSAM/selenodomain-associated 5 195 4.5E-66 T 11-10-2018 IPR018641 Transferase 1, rSAM/selenodomain-associated syc0377_c 36e522ee78c9d327f26b1b9a50f8b50d 422 TIGRFAM TIGR04283 glyco_like_mftF: transferase 2, rSAM/selenodomain-associated 204 421 2.5E-79 T 11-10-2018 IPR026461 Transferase 2, rSAM/selenodomain-associated syc0377_c 36e522ee78c9d327f26b1b9a50f8b50d 422 SUPERFAMILY SSF53448 8 200 1.45E-38 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases syc0377_c 36e522ee78c9d327f26b1b9a50f8b50d 422 Pfam PF09837 Uncharacterized protein conserved in bacteria (DUF2064) 46 162 6.5E-37 T 11-10-2018 IPR018641 Transferase 1, rSAM/selenodomain-associated syc0377_c 36e522ee78c9d327f26b1b9a50f8b50d 422 SUPERFAMILY SSF53448 198 388 6.65E-35 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases syc0133_c 67280ce68042fdf2f87820d3c6073ce5 539 PIRSF PIRSF037250 1 458 2.6E-230 T 11-10-2018 IPR017156 Carbon dioxide concentrating mechanism protein, CcmM syc0133_c 67280ce68042fdf2f87820d3c6073ce5 539 PIRSF PIRSF037250 449 539 5.4E-40 T 11-10-2018 IPR017156 Carbon dioxide concentrating mechanism protein, CcmM syc0133_c 67280ce68042fdf2f87820d3c6073ce5 539 SUPERFAMILY SSF55239 334 444 5.23E-31 T 11-10-2018 IPR036385 Ribulose bisphosphate carboxylase, small subunit superfamily KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 syc0133_c 67280ce68042fdf2f87820d3c6073ce5 539 SUPERFAMILY SSF51161 17 165 1.39E-27 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily syc0133_c 67280ce68042fdf2f87820d3c6073ce5 539 Gene3D G3DSA:3.30.190.10 337 451 2.0E-17 T 11-10-2018 IPR036385 Ribulose bisphosphate carboxylase, small subunit superfamily KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 syc0133_c 67280ce68042fdf2f87820d3c6073ce5 539 Gene3D G3DSA:3.30.190.10 224 336 4.5E-19 T 11-10-2018 IPR036385 Ribulose bisphosphate carboxylase, small subunit superfamily KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 syc0133_c 67280ce68042fdf2f87820d3c6073ce5 539 SUPERFAMILY SSF55239 224 336 3.93E-33 T 11-10-2018 IPR036385 Ribulose bisphosphate carboxylase, small subunit superfamily KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 syc0133_c 67280ce68042fdf2f87820d3c6073ce5 539 SMART SM00961 214 309 1.6E-48 T 11-10-2018 IPR000894 Ribulose bisphosphate carboxylase small chain, domain KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 syc0133_c 67280ce68042fdf2f87820d3c6073ce5 539 SMART SM00961 333 425 4.1E-50 T 11-10-2018 IPR000894 Ribulose bisphosphate carboxylase small chain, domain KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 syc0133_c 67280ce68042fdf2f87820d3c6073ce5 539 SMART SM00961 446 539 2.6E-45 T 11-10-2018 IPR000894 Ribulose bisphosphate carboxylase small chain, domain KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 syc0133_c 67280ce68042fdf2f87820d3c6073ce5 539 Gene3D G3DSA:2.160.10.10 15 184 9.3E-45 T 11-10-2018 syc0133_c 67280ce68042fdf2f87820d3c6073ce5 539 SUPERFAMILY SSF55239 451 539 1.44E-25 T 11-10-2018 IPR036385 Ribulose bisphosphate carboxylase, small subunit superfamily KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 syc0133_c 67280ce68042fdf2f87820d3c6073ce5 539 Pfam PF00101 Ribulose bisphosphate carboxylase, small chain 226 309 4.4E-20 T 11-10-2018 IPR000894 Ribulose bisphosphate carboxylase small chain, domain KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 syc0133_c 67280ce68042fdf2f87820d3c6073ce5 539 Pfam PF00101 Ribulose bisphosphate carboxylase, small chain 341 425 1.0E-18 T 11-10-2018 IPR000894 Ribulose bisphosphate carboxylase small chain, domain KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 syc0133_c 67280ce68042fdf2f87820d3c6073ce5 539 Pfam PF00101 Ribulose bisphosphate carboxylase, small chain 453 539 3.0E-16 T 11-10-2018 IPR000894 Ribulose bisphosphate carboxylase small chain, domain KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 syc0133_c 67280ce68042fdf2f87820d3c6073ce5 539 Gene3D G3DSA:3.30.190.10 452 539 8.8E-12 T 11-10-2018 IPR036385 Ribulose bisphosphate carboxylase, small subunit superfamily KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 syc2029_c 2f2437aaefe3ee48d3484641d1179df0 281 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 3 281 5.1E-106 T 11-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 syc2029_c 2f2437aaefe3ee48d3484641d1179df0 281 SUPERFAMILY SSF55681 48 281 5.16E-78 T 11-10-2018 syc2029_c 2f2437aaefe3ee48d3484641d1179df0 281 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 1 43 5.4E-9 T 11-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 syc2029_c 2f2437aaefe3ee48d3484641d1179df0 281 SUPERFAMILY SSF46589 1 54 1.99E-6 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 syc2029_c 2f2437aaefe3ee48d3484641d1179df0 281 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 1 281 39.815 T 11-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 syc2029_c 2f2437aaefe3ee48d3484641d1179df0 281 Gene3D G3DSA:3.30.930.10 1 281 2.1E-112 T 11-10-2018 syc2029_c 2f2437aaefe3ee48d3484641d1179df0 281 Pfam PF01409 tRNA synthetases class II core domain (F) 48 281 4.5E-102 T 11-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 syc1941_d a5b6c64e63e2b6e89f84d95752353f89 737 PRINTS PR01439 Cellulose synthase subunit A signature 558 579 1.3E-18 T 11-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 syc1941_d a5b6c64e63e2b6e89f84d95752353f89 737 PRINTS PR01439 Cellulose synthase subunit A signature 254 278 1.3E-18 T 11-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 syc1941_d a5b6c64e63e2b6e89f84d95752353f89 737 PRINTS PR01439 Cellulose synthase subunit A signature 484 503 1.3E-18 T 11-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 syc1941_d a5b6c64e63e2b6e89f84d95752353f89 737 PRINTS PR01439 Cellulose synthase subunit A signature 175 194 1.3E-18 T 11-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 syc1941_d a5b6c64e63e2b6e89f84d95752353f89 737 PRINTS PR01439 Cellulose synthase subunit A signature 415 441 1.3E-18 T 11-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 syc1941_d a5b6c64e63e2b6e89f84d95752353f89 737 PRINTS PR01439 Cellulose synthase subunit A signature 87 107 1.3E-18 T 11-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 syc1941_d a5b6c64e63e2b6e89f84d95752353f89 737 SUPERFAMILY SSF53448 165 440 5.57E-48 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases syc1941_d a5b6c64e63e2b6e89f84d95752353f89 737 Pfam PF07238 PilZ domain 585 702 4.8E-6 T 11-10-2018 IPR009875 PilZ domain GO:0035438 syc1941_d a5b6c64e63e2b6e89f84d95752353f89 737 Gene3D G3DSA:3.90.550.10 157 374 4.0E-78 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases syc1941_d a5b6c64e63e2b6e89f84d95752353f89 737 Pfam PF00535 Glycosyl transferase family 2 169 337 5.1E-29 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 syc0150_c d0cf2ba96482c1ab855cf2c225bdcf06 175 Gene3D G3DSA:2.60.120.1140 25 159 3.2E-37 T 11-10-2018 IPR038695 Saro_0823-like superfamily syc0150_c d0cf2ba96482c1ab855cf2c225bdcf06 175 Pfam PF02643 Uncharacterized ACR, COG1430 53 158 5.8E-29 T 11-10-2018 IPR003795 Protein of unknown function DUF192 syc1072_d 00137d8e434d2b7e557b2edbd8b5761c 100 ProSitePatterns PS00527 Ribosomal protein S14 signature. 62 84 - T 11-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc1072_d 00137d8e434d2b7e557b2edbd8b5761c 100 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 100 28.797 T 11-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid syc1072_d 00137d8e434d2b7e557b2edbd8b5761c 100 SUPERFAMILY SSF57716 2 100 2.85E-39 T 11-10-2018 syc1072_d 00137d8e434d2b7e557b2edbd8b5761c 100 Pfam PF00253 Ribosomal protein S14p/S29e 46 99 1.4E-28 T 11-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc1072_d 00137d8e434d2b7e557b2edbd8b5761c 100 Gene3D G3DSA:4.10.830.10 39 100 1.5E-25 T 11-10-2018 syc1202_d 91aeaf92a090381059d025ea018095cc 279 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 3 265 1.6E-79 T 11-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 syc1202_d 91aeaf92a090381059d025ea018095cc 279 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 1 268 54.842 T 11-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 syc1202_d 91aeaf92a090381059d025ea018095cc 279 Gene3D G3DSA:3.40.50.150 1 202 5.0E-65 T 11-10-2018 syc1202_d 91aeaf92a090381059d025ea018095cc 279 Gene3D G3DSA:1.10.8.100 203 269 7.8E-16 T 11-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 syc1202_d 91aeaf92a090381059d025ea018095cc 279 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 33 60 - T 11-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 syc1202_d 91aeaf92a090381059d025ea018095cc 279 SMART SM00650 17 198 3.6E-68 T 11-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 syc1202_d 91aeaf92a090381059d025ea018095cc 279 Pfam PF00398 Ribosomal RNA adenine dimethylase 3 262 2.0E-57 T 11-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm syc1202_d 91aeaf92a090381059d025ea018095cc 279 SUPERFAMILY SSF53335 3 265 2.17E-68 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase syc1570_d dc5b9391f84fcc76ad68fd879ec2c1d0 153 ProSitePatterns PS00079 Multicopper oxidases signature 1. 130 150 - T 11-10-2018 IPR033138 Multicopper oxidases, conserved site syc1570_d dc5b9391f84fcc76ad68fd879ec2c1d0 153 SUPERFAMILY SSF49503 14 152 4.08E-19 T 11-10-2018 IPR008972 Cupredoxin syc1570_d dc5b9391f84fcc76ad68fd879ec2c1d0 153 Pfam PF13473 Cupredoxin-like domain 20 152 2.0E-9 T 11-10-2018 IPR028096 EfeO-type cupredoxin-like domain syc1570_d dc5b9391f84fcc76ad68fd879ec2c1d0 153 Gene3D G3DSA:2.60.40.420 35 153 3.1E-16 T 11-10-2018 IPR008972 Cupredoxin syc0176_c 5312ed264cc6338594336f8514f9cf9e 574 TIGRFAM TIGR00815 sulP: sulfate permease 12 553 4.4E-175 T 11-10-2018 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 syc0176_c 5312ed264cc6338594336f8514f9cf9e 574 SUPERFAMILY SSF52091 446 558 1.59E-13 T 11-10-2018 IPR036513 STAS domain superfamily syc0176_c 5312ed264cc6338594336f8514f9cf9e 574 Gene3D G3DSA:3.30.750.24 437 564 2.5E-32 T 11-10-2018 IPR036513 STAS domain superfamily syc0176_c 5312ed264cc6338594336f8514f9cf9e 574 Pfam PF00916 Sulfate permease family 25 392 1.3E-98 T 11-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 syc0176_c 5312ed264cc6338594336f8514f9cf9e 574 Pfam PF01740 STAS domain 444 553 9.1E-19 T 11-10-2018 IPR002645 STAS domain syc0174_c d76bc44da93599f7b52141afa64e354b 128 Pfam PF16326 ABC transporter C-terminal domain 56 123 9.6E-17 T 11-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 syc0174_c d76bc44da93599f7b52141afa64e354b 128 Gene3D G3DSA:1.10.287.380 46 127 1.6E-11 T 11-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 syc0562_c 20ed699087179f7813af7131fc6ddb2b 204 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 63 191 1.4E-22 T 11-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 syc0562_c 20ed699087179f7813af7131fc6ddb2b 204 Gene3D G3DSA:3.30.530.20 56 196 1.9E-24 T 11-10-2018 IPR023393 START-like domain superfamily syc0562_c 20ed699087179f7813af7131fc6ddb2b 204 SUPERFAMILY SSF55961 56 198 1.32E-20 T 11-10-2018 syc0067_c e072f1d4a98184d97db425020d8b76e4 471 Pfam PF02233 NAD(P) transhydrogenase beta subunit 8 464 8.2E-181 T 11-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 syc0067_c e072f1d4a98184d97db425020d8b76e4 471 PIRSF PIRSF000204 2 469 3.3E-181 T 11-10-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 syc0067_c e072f1d4a98184d97db425020d8b76e4 471 SUPERFAMILY SSF52467 297 469 8.99E-71 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily syc0067_c e072f1d4a98184d97db425020d8b76e4 471 Gene3D G3DSA:3.40.50.1220 287 470 3.7E-78 T 11-10-2018 syc2366_c 1c983630ab26a992741625ff77701042 483 Gene3D G3DSA:1.10.10.10 10 79 1.1E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily syc2366_c 1c983630ab26a992741625ff77701042 483 SUPERFAMILY SSF46785 5 79 1.51E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily syc2366_c 1c983630ab26a992741625ff77701042 483 Pfam PF00155 Aminotransferase class I and II 150 457 2.6E-32 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 syc2366_c 1c983630ab26a992741625ff77701042 483 Gene3D G3DSA:3.90.1150.10 115 475 8.4E-101 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 syc2366_c 1c983630ab26a992741625ff77701042 483 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 77 2.4E-17 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 syc2366_c 1c983630ab26a992741625ff77701042 483 SUPERFAMILY SSF53383 106 477 7.98E-91 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase syc2366_c 1c983630ab26a992741625ff77701042 483 SMART SM00345 18 77 1.9E-20 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 syc2366_c 1c983630ab26a992741625ff77701042 483 Gene3D G3DSA:3.40.640.10 152 370 8.4E-101 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 syc2030_d a8cedef18fe2ef4f47ceaf0f7740811b 258 Gene3D G3DSA:3.40.1210.10 1 258 2.6E-88 T 11-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 syc2030_d a8cedef18fe2ef4f47ceaf0f7740811b 258 Pfam PF01975 Survival protein SurE 4 188 2.5E-62 T 11-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 syc2030_d a8cedef18fe2ef4f47ceaf0f7740811b 258 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 258 38.269 T 11-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 syc2030_d a8cedef18fe2ef4f47ceaf0f7740811b 258 SUPERFAMILY SSF64167 1 255 2.22E-80 T 11-10-2018 syc2030_d a8cedef18fe2ef4f47ceaf0f7740811b 258 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 245 2.9E-78 T 11-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 syc1443_d d50a6e21202541d754ce2fce0870186e 410 SUPERFAMILY SSF53335 64 254 7.94E-24 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase syc1443_d d50a6e21202541d754ce2fce0870186e 410 Gene3D G3DSA:2.20.25.520 1 56 2.2E-16 T 11-10-2018 IPR038576 Methyltransferase putative zinc binding domain superfamily syc1443_d d50a6e21202541d754ce2fce0870186e 410 Gene3D G3DSA:3.40.50.720 314 409 6.4E-28 T 11-10-2018 syc1443_d d50a6e21202541d754ce2fce0870186e 410 Pfam PF08421 Putative zinc binding domain 5 66 1.4E-23 T 11-10-2018 IPR013630 Methyltransferase putative zinc binding domain syc1443_d d50a6e21202541d754ce2fce0870186e 410 Pfam PF13489 Methyltransferase domain 83 243 3.0E-14 T 11-10-2018 syc1443_d d50a6e21202541d754ce2fce0870186e 410 Pfam PF08484 C-methyltransferase C-terminal domain 251 395 1.8E-50 T 11-10-2018 IPR013691 C-methyltransferase syc1443_d d50a6e21202541d754ce2fce0870186e 410 Gene3D G3DSA:3.40.50.150 59 262 5.7E-43 T 11-10-2018 syc1848_d 21cb679f868caa0ae0bbab31fb81fb43 387 ProSitePatterns PS00617 RecF protein signature 1. 117 137 - T 11-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 syc1848_d 21cb679f868caa0ae0bbab31fb81fb43 387 SUPERFAMILY SSF52540 1 349 5.07E-38 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc1848_d 21cb679f868caa0ae0bbab31fb81fb43 387 ProSitePatterns PS00618 RecF protein signature 2. 311 329 - T 11-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 syc1848_d 21cb679f868caa0ae0bbab31fb81fb43 387 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 364 1.7E-89 T 11-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 syc1848_d 21cb679f868caa0ae0bbab31fb81fb43 387 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 387 97.904 T 11-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 syc1848_d 21cb679f868caa0ae0bbab31fb81fb43 387 Gene3D G3DSA:1.20.1050.90 120 310 4.7E-97 T 11-10-2018 syc1848_d 21cb679f868caa0ae0bbab31fb81fb43 387 Gene3D G3DSA:3.40.50.300 6 344 4.7E-97 T 11-10-2018 syc1848_d 21cb679f868caa0ae0bbab31fb81fb43 387 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 354 1.5E-15 T 11-10-2018 IPR003395 RecF/RecN/SMC, N-terminal syc1640_d 6eb34ab02efb422ab67df2cfc2ca3b8a 232 Pfam PF04131 Putative N-acetylmannosamine-6-phosphate epimerase 32 229 1.4E-46 T 11-10-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 syc1640_d 6eb34ab02efb422ab67df2cfc2ca3b8a 232 Gene3D G3DSA:3.20.20.70 1 228 2.5E-80 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 syc1640_d 6eb34ab02efb422ab67df2cfc2ca3b8a 232 SUPERFAMILY SSF51366 10 225 1.77E-55 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 syc1640_d 6eb34ab02efb422ab67df2cfc2ca3b8a 232 Hamap MF_01235 Putative N-acetylmannosamine-6-phosphate 2-epimerase [nanE]. 8 229 34.546 T 11-10-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 syc0231_c 2e8912ead7251156bb8745018099043e 75 Gene3D G3DSA:2.30.30.50 1 74 4.3E-40 T 11-10-2018 syc0231_c 2e8912ead7251156bb8745018099043e 75 Pfam PF02427 Photosystem I reaction centre subunit IV / PsaE 3 69 4.3E-35 T 11-10-2018 IPR003375 Photosystem I PsaE, reaction centre subunit IV GO:0009522|GO:0009538|GO:0015979 syc0231_c 2e8912ead7251156bb8745018099043e 75 ProDom PD004772 I PHOTOSYSTEM SUBUNIT IV REACTION CENTER MEMBRANE PHOTOSYNTHESIS THYLAKOID CHLOROPLAST 10 61 2.0E-24 T 11-10-2018 IPR003375 Photosystem I PsaE, reaction centre subunit IV GO:0009522|GO:0009538|GO:0015979 syc0231_c 2e8912ead7251156bb8745018099043e 75 SUPERFAMILY SSF50090 2 72 1.06E-34 T 11-10-2018 IPR008990 Electron transport accessory-like domain superfamily syc0231_c 2e8912ead7251156bb8745018099043e 75 Hamap MF_00613 Photosystem I reaction center subunit IV [psaE]. 3 69 29.011 T 11-10-2018 IPR003375 Photosystem I PsaE, reaction centre subunit IV GO:0009522|GO:0009538|GO:0015979 syc2120_d ca97bb87b328e16f5b42e2f96bcb1d09 534 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 9 499 3.4E-163 T 11-10-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc2120_d ca97bb87b328e16f5b42e2f96bcb1d09 534 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 141 160 9.8E-32 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc2120_d ca97bb87b328e16f5b42e2f96bcb1d09 534 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 171 195 9.8E-32 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc2120_d ca97bb87b328e16f5b42e2f96bcb1d09 534 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 330 349 9.8E-32 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc2120_d ca97bb87b328e16f5b42e2f96bcb1d09 534 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 382 408 9.8E-32 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc2120_d ca97bb87b328e16f5b42e2f96bcb1d09 534 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 242 266 9.8E-32 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc2120_d ca97bb87b328e16f5b42e2f96bcb1d09 534 Pfam PF00361 Proton-conducting membrane transporter 136 414 1.7E-60 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc2120_d ca97bb87b328e16f5b42e2f96bcb1d09 534 Hamap MF_00491 NAD(P)H-quinone oxidoreductase chain 4 [ndhD]. 3 504 40.434 T 11-10-2018 IPR022997 NADH-quinone oxidoreductase chain 4 GO:0016655|GO:0055114 syc2465_d 8ca4e6894bf0b18dec9a2266afee83ea 15 Pfam PF02529 Cytochrome B6-F complex subunit 5 2 14 1.2E-5 T 11-10-2018 IPR003683 Cytochrome b6/f complex, subunit 5 GO:0009512 syc1770_c 98ffe3622714d2ca7f1a3dc7bccaf10e 160 Gene3D G3DSA:1.20.5.510 9 66 3.2E-34 T 11-10-2018 syc1770_c 98ffe3622714d2ca7f1a3dc7bccaf10e 160 TIGRFAM TIGR01156 cytb6/f_IV: cytb6/f complex subunit IV 1 160 1.6E-98 T 11-10-2018 IPR005870 Cytochrome b6/f complex, subunit IV GO:0009767|GO:0042651|GO:0045156 syc1770_c 98ffe3622714d2ca7f1a3dc7bccaf10e 160 PIRSF PIRSF000033 1 160 1.7E-92 T 11-10-2018 IPR005870 Cytochrome b6/f complex, subunit IV GO:0009767|GO:0042651|GO:0045156 syc1770_c 98ffe3622714d2ca7f1a3dc7bccaf10e 160 Hamap MF_01344 Cytochrome b6-f complex subunit 4 [petD]. 1 160 43.827 T 11-10-2018 IPR005870 Cytochrome b6/f complex, subunit IV GO:0009767|GO:0042651|GO:0045156 syc1770_c 98ffe3622714d2ca7f1a3dc7bccaf10e 160 SUPERFAMILY SSF81648 2 158 1.47E-41 T 11-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 syc1770_c 98ffe3622714d2ca7f1a3dc7bccaf10e 160 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 65 153 8.9E-16 T 11-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 syc1770_c 98ffe3622714d2ca7f1a3dc7bccaf10e 160 Gene3D G3DSA:1.10.287.980 67 160 7.0E-34 T 11-10-2018 syc0348_d eb4fa7f1b92183e2352c4620abe8d20b 816 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 85 218 1.8E-6 T 11-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like syc0348_d eb4fa7f1b92183e2352c4620abe8d20b 816 Gene3D G3DSA:1.25.40.10 658 814 3.3E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc0348_d eb4fa7f1b92183e2352c4620abe8d20b 816 SUPERFAMILY SSF48452 706 812 1.01E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc1685_d a8e845976c17b396b29e58d65cbb6167 305 Pfam PF03239 Iron permease FTR1 family 7 283 2.2E-49 T 11-10-2018 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0016020|GO:0033573|GO:0034755 syc1402_c baf3279db08533cf10f6b5f282c0e285 187 Pfam PF05685 Putative restriction endonuclease 14 183 1.7E-40 T 11-10-2018 IPR008538 Domain of unknown function DUF820 syc1402_c baf3279db08533cf10f6b5f282c0e285 187 SUPERFAMILY SSF52980 3 187 2.25E-51 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 syc1402_c baf3279db08533cf10f6b5f282c0e285 187 Gene3D G3DSA:3.90.1570.10 2 187 1.7E-66 T 11-10-2018 syc0279_c a76fe0eb4c38b804331ea29d9ccbb1d4 511 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 225 495 6.3E-59 T 11-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 syc0279_c a76fe0eb4c38b804331ea29d9ccbb1d4 511 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 228 502 20.965 T 11-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 syc0279_c a76fe0eb4c38b804331ea29d9ccbb1d4 511 SUPERFAMILY SSF53613 227 496 8.72E-52 T 11-10-2018 IPR029056 Ribokinase-like syc0279_c a76fe0eb4c38b804331ea29d9ccbb1d4 511 Pfam PF01256 Carbohydrate kinase 252 493 8.8E-57 T 11-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 syc0279_c a76fe0eb4c38b804331ea29d9ccbb1d4 511 Gene3D G3DSA:3.40.1190.20 226 508 7.5E-62 T 11-10-2018 IPR029056 Ribokinase-like syc0279_c a76fe0eb4c38b804331ea29d9ccbb1d4 511 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 10 208 1.0E-40 T 11-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 syc0279_c a76fe0eb4c38b804331ea29d9ccbb1d4 511 Pfam PF03853 YjeF-related protein N-terminus 32 188 5.8E-38 T 11-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 syc0279_c a76fe0eb4c38b804331ea29d9ccbb1d4 511 PIRSF PIRSF017184 9 504 1.2E-90 T 11-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 syc0279_c a76fe0eb4c38b804331ea29d9ccbb1d4 511 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 13 209 19.044 T 11-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 syc0279_c a76fe0eb4c38b804331ea29d9ccbb1d4 511 Gene3D G3DSA:3.40.50.10260 9 214 3.3E-46 T 11-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 syc0279_c a76fe0eb4c38b804331ea29d9ccbb1d4 511 SUPERFAMILY SSF64153 11 249 2.09E-54 T 11-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 syc0279_c a76fe0eb4c38b804331ea29d9ccbb1d4 511 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 438 448 - T 11-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site syc2162_c e5d27e4014409238f345ed6863a9aa0d 177 Pfam PF14221 Domain of unknown function (DUF4330) 1 173 1.9E-57 T 11-10-2018 IPR025480 Protein of unknown function DUF4330 syc1809_d 81d4fae52379d019ab96358336bb5748 323 SUPERFAMILY SSF53697 7 320 3.78E-57 T 11-10-2018 syc1809_d 81d4fae52379d019ab96358336bb5748 323 Gene3D G3DSA:3.10.580.10 192 321 3.7E-39 T 11-10-2018 syc1809_d 81d4fae52379d019ab96358336bb5748 323 Gene3D G3DSA:3.40.50.10490 5 191 7.3E-63 T 11-10-2018 syc1809_d 81d4fae52379d019ab96358336bb5748 323 SMART SM00116 206 254 2.1E-6 T 11-10-2018 IPR000644 CBS domain syc1809_d 81d4fae52379d019ab96358336bb5748 323 SMART SM00116 273 323 2.8 T 11-10-2018 IPR000644 CBS domain syc1809_d 81d4fae52379d019ab96358336bb5748 323 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 41 313 9.8E-89 T 11-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 syc1809_d 81d4fae52379d019ab96358336bb5748 323 PIRSF PIRSF004692 3 323 1.5E-125 T 11-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 syc1809_d 81d4fae52379d019ab96358336bb5748 323 Pfam PF00571 CBS domain 267 320 4.1E-6 T 11-10-2018 IPR000644 CBS domain syc1809_d 81d4fae52379d019ab96358336bb5748 323 Pfam PF00571 CBS domain 203 253 3.7E-6 T 11-10-2018 IPR000644 CBS domain syc1809_d 81d4fae52379d019ab96358336bb5748 323 Pfam PF01380 SIS domain 38 167 2.3E-23 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 syc0500_c a72ba4eef3bc283623aab01ac448050c 163 SUPERFAMILY SSF46458 3 163 2.19E-55 T 11-10-2018 IPR009050 Globin-like superfamily syc0500_c a72ba4eef3bc283623aab01ac448050c 163 PIRSF PIRSF000081 2 163 2.3E-44 T 11-10-2018 IPR012128 Phycobilisome, alpha/beta subunit GO:0015979|GO:0030089 syc0500_c a72ba4eef3bc283623aab01ac448050c 163 Gene3D G3DSA:1.10.490.20 1 163 1.3E-66 T 11-10-2018 IPR038719 Phycobilisome, alpha/beta subunit superfamily syc0500_c a72ba4eef3bc283623aab01ac448050c 163 Pfam PF00502 Phycobilisome protein 9 162 6.9E-49 T 11-10-2018 IPR012128 Phycobilisome, alpha/beta subunit GO:0015979|GO:0030089 syc0500_c a72ba4eef3bc283623aab01ac448050c 163 TIGRFAM TIGR01338 phycocy_alpha: phycocyanin, alpha subunit 3 163 1.8E-88 T 11-10-2018 IPR006246 Phycocyanin, alpha subunit GO:0015979|GO:0030089 syc1777_d f6f6d766636deef4dc67666447eb3dc9 225 SUPERFAMILY SSF48371 8 214 4.68E-24 T 11-10-2018 IPR016024 Armadillo-type fold syc1777_d f6f6d766636deef4dc67666447eb3dc9 225 SMART SM00567 E-Z type HEAT repeats 176 205 410.0 T 11-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 syc1777_d f6f6d766636deef4dc67666447eb3dc9 225 SMART SM00567 E-Z type HEAT repeats 15 44 24.0 T 11-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 syc1777_d f6f6d766636deef4dc67666447eb3dc9 225 SMART SM00567 E-Z type HEAT repeats 46 75 1.7 T 11-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 syc1777_d f6f6d766636deef4dc67666447eb3dc9 225 SMART SM00567 E-Z type HEAT repeats 78 106 620.0 T 11-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 syc1777_d f6f6d766636deef4dc67666447eb3dc9 225 Pfam PF13646 HEAT repeats 36 119 2.1E-13 T 11-10-2018 syc1777_d f6f6d766636deef4dc67666447eb3dc9 225 Pfam PF13646 HEAT repeats 136 212 9.5E-7 T 11-10-2018 syc1777_d f6f6d766636deef4dc67666447eb3dc9 225 Gene3D G3DSA:1.25.10.10 3 161 1.8E-20 T 11-10-2018 IPR011989 Armadillo-like helical syc1647_c 05d8125c0c736ee5251438150896be63 292 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 2 288 8.7E-163 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 syc1647_c 05d8125c0c736ee5251438150896be63 292 Gene3D G3DSA:1.20.58.180 206 285 5.9E-34 T 11-10-2018 syc1647_c 05d8125c0c736ee5251438150896be63 292 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 3 280 1.7E-147 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 syc1647_c 05d8125c0c736ee5251438150896be63 292 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 1 281 58.39 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 syc1647_c 05d8125c0c736ee5251438150896be63 292 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 156 171 3.8E-66 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 syc1647_c 05d8125c0c736ee5251438150896be63 292 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 76 96 3.8E-66 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 syc1647_c 05d8125c0c736ee5251438150896be63 292 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 55 70 3.8E-66 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 syc1647_c 05d8125c0c736ee5251438150896be63 292 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 241 257 3.8E-66 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 syc1647_c 05d8125c0c736ee5251438150896be63 292 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 107 131 3.8E-66 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 syc1647_c 05d8125c0c736ee5251438150896be63 292 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 133 153 3.8E-66 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 syc1647_c 05d8125c0c736ee5251438150896be63 292 SUPERFAMILY SSF55681 1 280 3.23E-133 T 11-10-2018 syc1647_c 05d8125c0c736ee5251438150896be63 292 Gene3D G3DSA:3.30.930.10 1 204 2.7E-108 T 11-10-2018 syc0216_c da3f9ea3dde794508960d4497b276a0f 1436 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1325 1343 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site syc0216_c da3f9ea3dde794508960d4497b276a0f 1436 Gene3D G3DSA:2.150.10.10 1291 1375 1.8E-19 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal syc0216_c da3f9ea3dde794508960d4497b276a0f 1436 Gene3D G3DSA:2.130.10.130 153 222 2.4E-15 T 11-10-2018 IPR028994 Integrin alpha, N-terminal Reactome: R-HSA-216083 syc0216_c da3f9ea3dde794508960d4497b276a0f 1436 Gene3D G3DSA:2.130.10.130 941 1082 8.2E-26 T 11-10-2018 IPR028994 Integrin alpha, N-terminal Reactome: R-HSA-216083 syc0216_c da3f9ea3dde794508960d4497b276a0f 1436 Gene3D G3DSA:2.130.10.130 81 152 1.0E-14 T 11-10-2018 IPR028994 Integrin alpha, N-terminal Reactome: R-HSA-216083 syc0216_c da3f9ea3dde794508960d4497b276a0f 1436 Gene3D G3DSA:2.130.10.130 296 367 4.2E-13 T 11-10-2018 IPR028994 Integrin alpha, N-terminal Reactome: R-HSA-216083 syc0216_c da3f9ea3dde794508960d4497b276a0f 1436 Gene3D G3DSA:2.130.10.130 1083 1183 1.7E-13 T 11-10-2018 IPR028994 Integrin alpha, N-terminal Reactome: R-HSA-216083 syc0216_c da3f9ea3dde794508960d4497b276a0f 1436 Gene3D G3DSA:2.130.10.130 794 864 2.2E-13 T 11-10-2018 IPR028994 Integrin alpha, N-terminal Reactome: R-HSA-216083 syc0216_c da3f9ea3dde794508960d4497b276a0f 1436 Gene3D G3DSA:2.130.10.130 865 940 7.8E-13 T 11-10-2018 IPR028994 Integrin alpha, N-terminal Reactome: R-HSA-216083 syc0216_c da3f9ea3dde794508960d4497b276a0f 1436 Gene3D G3DSA:2.130.10.130 1 80 5.7E-14 T 11-10-2018 IPR028994 Integrin alpha, N-terminal Reactome: R-HSA-216083 syc0216_c da3f9ea3dde794508960d4497b276a0f 1436 Gene3D G3DSA:2.130.10.130 223 295 2.4E-11 T 11-10-2018 IPR028994 Integrin alpha, N-terminal Reactome: R-HSA-216083 syc0216_c da3f9ea3dde794508960d4497b276a0f 1436 Gene3D G3DSA:2.130.10.130 437 538 9.7E-13 T 11-10-2018 IPR028994 Integrin alpha, N-terminal Reactome: R-HSA-216083 syc0216_c da3f9ea3dde794508960d4497b276a0f 1436 Gene3D G3DSA:2.130.10.130 368 436 8.0E-12 T 11-10-2018 IPR028994 Integrin alpha, N-terminal Reactome: R-HSA-216083 syc0216_c da3f9ea3dde794508960d4497b276a0f 1436 SUPERFAMILY SSF51120 1261 1390 2.88E-25 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal syc0216_c da3f9ea3dde794508960d4497b276a0f 1436 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1316 1334 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site syc0216_c da3f9ea3dde794508960d4497b276a0f 1436 SMART SM00191 239 298 3.0E-6 T 11-10-2018 IPR013519 Integrin alpha beta-propellor Reactome: R-HSA-216083 syc0216_c da3f9ea3dde794508960d4497b276a0f 1436 SMART SM00191 310 371 9.1E-8 T 11-10-2018 IPR013519 Integrin alpha beta-propellor Reactome: R-HSA-216083 syc0216_c da3f9ea3dde794508960d4497b276a0f 1436 SMART SM00191 1099 1155 1.1E-9 T 11-10-2018 IPR013519 Integrin alpha beta-propellor Reactome: R-HSA-216083 syc0216_c da3f9ea3dde794508960d4497b276a0f 1436 SMART SM00191 168 227 1.6E-7 T 11-10-2018 IPR013519 Integrin alpha beta-propellor Reactome: R-HSA-216083 syc0216_c da3f9ea3dde794508960d4497b276a0f 1436 SMART SM00191 740 800 4.8E-7 T 11-10-2018 IPR013519 Integrin alpha beta-propellor Reactome: R-HSA-216083 syc0216_c da3f9ea3dde794508960d4497b276a0f 1436 SMART SM00191 953 1013 6.9E-6 T 11-10-2018 IPR013519 Integrin alpha beta-propellor Reactome: R-HSA-216083 syc0216_c da3f9ea3dde794508960d4497b276a0f 1436 SMART SM00191 26 86 4.0E-5 T 11-10-2018 IPR013519 Integrin alpha beta-propellor Reactome: R-HSA-216083 syc0216_c da3f9ea3dde794508960d4497b276a0f 1436 SMART SM00191 811 868 9.6E-7 T 11-10-2018 IPR013519 Integrin alpha beta-propellor Reactome: R-HSA-216083 syc0216_c da3f9ea3dde794508960d4497b276a0f 1436 SMART SM00191 453 513 1.1E-5 T 11-10-2018 IPR013519 Integrin alpha beta-propellor Reactome: R-HSA-216083 syc0216_c da3f9ea3dde794508960d4497b276a0f 1436 SMART SM00191 1028 1085 4.2E-5 T 11-10-2018 IPR013519 Integrin alpha beta-propellor Reactome: R-HSA-216083 syc0216_c da3f9ea3dde794508960d4497b276a0f 1436 SMART SM00191 382 439 2.6E-6 T 11-10-2018 IPR013519 Integrin alpha beta-propellor Reactome: R-HSA-216083 syc0216_c da3f9ea3dde794508960d4497b276a0f 1436 SMART SM00191 97 156 1.8E-6 T 11-10-2018 IPR013519 Integrin alpha beta-propellor Reactome: R-HSA-216083 syc0216_c da3f9ea3dde794508960d4497b276a0f 1436 SMART SM00191 882 938 1.5E-7 T 11-10-2018 IPR013519 Integrin alpha beta-propellor Reactome: R-HSA-216083 syc0216_c da3f9ea3dde794508960d4497b276a0f 1436 SMART SM00191 668 729 8.3E-6 T 11-10-2018 IPR013519 Integrin alpha beta-propellor Reactome: R-HSA-216083 syc0216_c da3f9ea3dde794508960d4497b276a0f 1436 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 1355 1427 4.1E-5 T 11-10-2018 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass syc0216_c da3f9ea3dde794508960d4497b276a0f 1436 SUPERFAMILY SSF69318 8 228 1.44E-22 T 11-10-2018 syc0216_c da3f9ea3dde794508960d4497b276a0f 1436 Pfam PF01839 FG-GAP repeat 1035 1070 1.9E-8 T 11-10-2018 IPR013517 FG-GAP repeat Reactome: R-HSA-216083 syc0216_c da3f9ea3dde794508960d4497b276a0f 1436 Pfam PF01839 FG-GAP repeat 176 210 2.2E-7 T 11-10-2018 IPR013517 FG-GAP repeat Reactome: R-HSA-216083 syc0216_c da3f9ea3dde794508960d4497b276a0f 1436 Pfam PF01839 FG-GAP repeat 1103 1141 1.6E-9 T 11-10-2018 IPR013517 FG-GAP repeat Reactome: R-HSA-216083 syc0216_c da3f9ea3dde794508960d4497b276a0f 1436 Pfam PF01839 FG-GAP repeat 459 496 3.9E-8 T 11-10-2018 IPR013517 FG-GAP repeat Reactome: R-HSA-216083 syc0216_c da3f9ea3dde794508960d4497b276a0f 1436 Pfam PF01839 FG-GAP repeat 747 782 1.6E-7 T 11-10-2018 IPR013517 FG-GAP repeat Reactome: R-HSA-216083 syc0216_c da3f9ea3dde794508960d4497b276a0f 1436 Pfam PF01839 FG-GAP repeat 819 853 2.9E-8 T 11-10-2018 IPR013517 FG-GAP repeat Reactome: R-HSA-216083 syc0216_c da3f9ea3dde794508960d4497b276a0f 1436 Pfam PF01839 FG-GAP repeat 674 711 7.2E-8 T 11-10-2018 IPR013517 FG-GAP repeat Reactome: R-HSA-216083 syc0216_c da3f9ea3dde794508960d4497b276a0f 1436 Pfam PF01839 FG-GAP repeat 105 139 1.5E-6 T 11-10-2018 IPR013517 FG-GAP repeat Reactome: R-HSA-216083 syc0216_c da3f9ea3dde794508960d4497b276a0f 1436 Pfam PF01839 FG-GAP repeat 33 68 4.0E-8 T 11-10-2018 IPR013517 FG-GAP repeat Reactome: R-HSA-216083 syc0216_c da3f9ea3dde794508960d4497b276a0f 1436 Pfam PF01839 FG-GAP repeat 889 924 3.5E-8 T 11-10-2018 IPR013517 FG-GAP repeat Reactome: R-HSA-216083 syc0216_c da3f9ea3dde794508960d4497b276a0f 1436 Pfam PF01839 FG-GAP repeat 317 353 4.0E-8 T 11-10-2018 IPR013517 FG-GAP repeat Reactome: R-HSA-216083 syc0216_c da3f9ea3dde794508960d4497b276a0f 1436 Pfam PF01839 FG-GAP repeat 392 424 6.5E-7 T 11-10-2018 IPR013517 FG-GAP repeat Reactome: R-HSA-216083 syc0216_c da3f9ea3dde794508960d4497b276a0f 1436 Pfam PF01839 FG-GAP repeat 960 999 8.0E-8 T 11-10-2018 IPR013517 FG-GAP repeat Reactome: R-HSA-216083 syc0216_c da3f9ea3dde794508960d4497b276a0f 1436 Pfam PF01839 FG-GAP repeat 246 281 3.5E-8 T 11-10-2018 IPR013517 FG-GAP repeat Reactome: R-HSA-216083 syc0216_c da3f9ea3dde794508960d4497b276a0f 1436 SUPERFAMILY SSF69318 162 567 2.79E-50 T 11-10-2018 syc0216_c da3f9ea3dde794508960d4497b276a0f 1436 Gene3D G3DSA:2.130.10.130 562 793 4.5E-26 T 11-10-2018 IPR028994 Integrin alpha, N-terminal Reactome: R-HSA-216083 syc0216_c da3f9ea3dde794508960d4497b276a0f 1436 PRINTS PR01185 Integrin alpha subunit signature 1103 1124 4.9E-11 T 11-10-2018 IPR000413 Integrin alpha chain GO:0007155|GO:0008305 Reactome: R-HSA-216083 syc0216_c da3f9ea3dde794508960d4497b276a0f 1436 PRINTS PR01185 Integrin alpha subunit signature 1031 1055 4.9E-11 T 11-10-2018 IPR000413 Integrin alpha chain GO:0007155|GO:0008305 Reactome: R-HSA-216083 syc0216_c da3f9ea3dde794508960d4497b276a0f 1436 PRINTS PR00313 NodO calcium binding signature 1329 1337 3.2E-6 T 11-10-2018 syc0216_c da3f9ea3dde794508960d4497b276a0f 1436 PRINTS PR00313 NodO calcium binding signature 1308 1319 3.2E-6 T 11-10-2018 syc0216_c da3f9ea3dde794508960d4497b276a0f 1436 PRINTS PR00313 NodO calcium binding signature 1320 1328 3.2E-6 T 11-10-2018 syc0216_c da3f9ea3dde794508960d4497b276a0f 1436 PRINTS PR00313 NodO calcium binding signature 1338 1347 3.2E-6 T 11-10-2018 syc0216_c da3f9ea3dde794508960d4497b276a0f 1436 SUPERFAMILY SSF69318 661 1087 9.16E-62 T 11-10-2018 syc1186_d f61c697f4e420261b53598f02ba53ad1 161 Pfam PF00502 Phycobilisome protein 7 160 1.3E-56 T 11-10-2018 IPR012128 Phycobilisome, alpha/beta subunit GO:0015979|GO:0030089 syc1186_d f61c697f4e420261b53598f02ba53ad1 161 Gene3D G3DSA:1.10.490.20 2 161 3.5E-60 T 11-10-2018 IPR038719 Phycobilisome, alpha/beta subunit superfamily syc1186_d f61c697f4e420261b53598f02ba53ad1 161 SUPERFAMILY SSF46458 3 161 1.94E-54 T 11-10-2018 IPR009050 Globin-like superfamily syc1186_d f61c697f4e420261b53598f02ba53ad1 161 PIRSF PIRSF000081 1 161 4.5E-58 T 11-10-2018 IPR012128 Phycobilisome, alpha/beta subunit GO:0015979|GO:0030089 syc0894_d 4ddf6620789dcc1eb161038e4bdb914a 128 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 51 2.8E-18 T 11-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc0894_d 4ddf6620789dcc1eb161038e4bdb914a 128 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 128 27.37 T 11-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc0894_d 4ddf6620789dcc1eb161038e4bdb914a 128 SUPERFAMILY SSF54736 56 128 2.44E-24 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like syc0894_d 4ddf6620789dcc1eb161038e4bdb914a 128 Gene3D G3DSA:3.30.1390.10 57 128 2.6E-30 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like syc0894_d 4ddf6620789dcc1eb161038e4bdb914a 128 SUPERFAMILY SSF48300 4 63 3.92E-16 T 11-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc0894_d 4ddf6620789dcc1eb161038e4bdb914a 128 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 62 107 9.0E-18 T 11-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc0894_d 4ddf6620789dcc1eb161038e4bdb914a 128 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 61 128 3.1E-29 T 11-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc0894_d 4ddf6620789dcc1eb161038e4bdb914a 128 Gene3D G3DSA:1.20.5.710 4 56 7.7E-18 T 11-10-2018 syc0894_d 4ddf6620789dcc1eb161038e4bdb914a 128 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 128 6.6E-50 T 11-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc0998_d ca3e066b6abd3f79aa8fb43a82638edd 129 SUPERFAMILY SSF161084 5 125 2.35E-23 T 11-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily syc0998_d ca3e066b6abd3f79aa8fb43a82638edd 129 Pfam PF01124 MAPEG family 6 128 2.0E-22 T 11-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein syc0998_d ca3e066b6abd3f79aa8fb43a82638edd 129 Gene3D G3DSA:1.20.120.550 1 129 9.3E-22 T 11-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily syc1038_c 63e6383f0546d5f3ffc578ef0f9e6322 316 Pfam PF06282 Protein of unknown function (DUF1036) 201 313 4.6E-26 T 11-10-2018 IPR009380 Protein of unknown function DUF1036 syc1038_c 63e6383f0546d5f3ffc578ef0f9e6322 316 Gene3D G3DSA:2.40.10.10 1 76 2.7E-13 T 11-10-2018 syc1038_c 63e6383f0546d5f3ffc578ef0f9e6322 316 Gene3D G3DSA:2.40.10.10 78 180 4.8E-26 T 11-10-2018 syc1038_c 63e6383f0546d5f3ffc578ef0f9e6322 316 PRINTS PR00834 HtrA/DegQ protease family signature 136 153 5.4E-9 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 syc1038_c 63e6383f0546d5f3ffc578ef0f9e6322 316 PRINTS PR00834 HtrA/DegQ protease family signature 114 131 5.4E-9 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 syc1038_c 63e6383f0546d5f3ffc578ef0f9e6322 316 PRINTS PR00834 HtrA/DegQ protease family signature 22 34 5.4E-9 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 syc1038_c 63e6383f0546d5f3ffc578ef0f9e6322 316 Pfam PF13365 Trypsin-like peptidase domain 11 143 1.9E-24 T 11-10-2018 syc1038_c 63e6383f0546d5f3ffc578ef0f9e6322 316 SUPERFAMILY SSF50494 2 169 3.89E-37 T 11-10-2018 IPR009003 Peptidase S1, PA clan syc0694_d 746936635308da3a2d65c4f360365a29 272 Gene3D G3DSA:2.70.98.10 7 271 3.2E-72 T 11-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 syc0694_d 746936635308da3a2d65c4f360365a29 272 Pfam PF01263 Aldose 1-epimerase 15 269 8.7E-32 T 11-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 syc0694_d 746936635308da3a2d65c4f360365a29 272 PIRSF PIRSF016020 2 272 1.5E-52 T 11-10-2018 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 syc0694_d 746936635308da3a2d65c4f360365a29 272 SUPERFAMILY SSF74650 14 267 2.7E-53 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 syc2452_d 8d395597f6552a22a63ebf76a1ba67c9 151 Pfam PF02082 Transcriptional regulator 7 89 2.8E-25 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type syc2452_d 8d395597f6552a22a63ebf76a1ba67c9 151 Gene3D G3DSA:1.10.10.10 3 151 8.4E-38 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily syc2452_d 8d395597f6552a22a63ebf76a1ba67c9 151 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 8 136 1.4E-31 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type syc2452_d 8d395597f6552a22a63ebf76a1ba67c9 151 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 55 73 - T 11-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site syc2452_d 8d395597f6552a22a63ebf76a1ba67c9 151 SUPERFAMILY SSF46785 8 137 6.97E-28 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily syc2110_d 60301e72b77794270f8d86f4ae484c62 440 SUPERFAMILY SSF63411 30 236 7.83E-57 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 syc2110_d 60301e72b77794270f8d86f4ae484c62 440 Gene3D G3DSA:3.30.830.10 246 439 2.2E-42 T 11-10-2018 syc2110_d 60301e72b77794270f8d86f4ae484c62 440 Pfam PF05193 Peptidase M16 inactive domain 194 369 2.4E-33 T 11-10-2018 IPR007863 Peptidase M16, C-terminal syc2110_d 60301e72b77794270f8d86f4ae484c62 440 Gene3D G3DSA:3.30.830.10 30 235 5.5E-64 T 11-10-2018 syc2110_d 60301e72b77794270f8d86f4ae484c62 440 Pfam PF00675 Insulinase (Peptidase family M16) 45 185 6.7E-32 T 11-10-2018 IPR011765 Peptidase M16, N-terminal syc2110_d 60301e72b77794270f8d86f4ae484c62 440 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 59 82 - T 11-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 syc2110_d 60301e72b77794270f8d86f4ae484c62 440 SUPERFAMILY SSF63411 255 433 3.35E-38 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 syc1148_c 330061de475f359a25959f36345f35f8 209 SUPERFAMILY SSF52172 18 154 1.1E-8 T 11-10-2018 IPR011006 CheY-like superfamily syc1148_c 330061de475f359a25959f36345f35f8 209 Gene3D G3DSA:3.40.50.12740 26 184 3.2E-7 T 11-10-2018 syc1164_d 735fd9677d9f1e1db628d15092bcf2b2 186 Pfam PF12263 Protein of unknown function (DUF3611) 6 180 5.8E-49 T 11-10-2018 IPR022051 Protein of unknown function DUF3611 syc0844_c 742b948a8d9140ac6aa4c9011ba3414e 555 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 527 4.8E-252 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 syc0844_c 742b948a8d9140ac6aa4c9011ba3414e 555 SUPERFAMILY SSF48592 6 522 1.67E-76 T 11-10-2018 IPR027413 GroEL-like equatorial domain superfamily syc0844_c 742b948a8d9140ac6aa4c9011ba3414e 555 SUPERFAMILY SSF54849 136 203 1.92E-19 T 11-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily syc0844_c 742b948a8d9140ac6aa4c9011ba3414e 555 Gene3D G3DSA:1.10.560.10 7 522 1.7E-227 T 11-10-2018 IPR027413 GroEL-like equatorial domain superfamily syc0844_c 742b948a8d9140ac6aa4c9011ba3414e 555 SUPERFAMILY SSF52029 184 375 3.49E-81 T 11-10-2018 IPR027409 GroEL-like apical domain superfamily syc0844_c 742b948a8d9140ac6aa4c9011ba3414e 555 Hamap MF_00600 60 kDa chaperonin [groL]. 1 552 41.104 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 syc0844_c 742b948a8d9140ac6aa4c9011ba3414e 555 ProSitePatterns PS00296 Chaperonins cpn60 signature. 404 415 - T 11-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 syc0844_c 742b948a8d9140ac6aa4c9011ba3414e 555 PRINTS PR00298 60kDa chaperonin signature 349 374 7.9E-72 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 syc0844_c 742b948a8d9140ac6aa4c9011ba3414e 555 PRINTS PR00298 60kDa chaperonin signature 397 418 7.9E-72 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 syc0844_c 742b948a8d9140ac6aa4c9011ba3414e 555 PRINTS PR00298 60kDa chaperonin signature 267 290 7.9E-72 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 syc0844_c 742b948a8d9140ac6aa4c9011ba3414e 555 PRINTS PR00298 60kDa chaperonin signature 82 109 7.9E-72 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 syc0844_c 742b948a8d9140ac6aa4c9011ba3414e 555 PRINTS PR00298 60kDa chaperonin signature 26 52 7.9E-72 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 syc0844_c 742b948a8d9140ac6aa4c9011ba3414e 555 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 525 1.5E-102 T 11-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 syc0844_c 742b948a8d9140ac6aa4c9011ba3414e 555 Gene3D G3DSA:3.30.260.10 135 409 1.7E-227 T 11-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily syc0844_c 742b948a8d9140ac6aa4c9011ba3414e 555 Gene3D G3DSA:3.50.7.10 191 371 1.7E-227 T 11-10-2018 IPR027409 GroEL-like apical domain superfamily syc0290_d 8598d895ff996f54c602a296a6268fc2 253 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 13 251 58.415 T 11-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc0290_d 8598d895ff996f54c602a296a6268fc2 253 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 16 243 2.6E-50 T 11-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc0290_d 8598d895ff996f54c602a296a6268fc2 253 ProSitePatterns PS00171 Triosephosphate isomerase active site. 174 184 - T 11-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc0290_d 8598d895ff996f54c602a296a6268fc2 253 Pfam PF00121 Triosephosphate isomerase 16 249 1.3E-86 T 11-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc0290_d 8598d895ff996f54c602a296a6268fc2 253 SUPERFAMILY SSF51351 12 251 8.12E-87 T 11-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc0290_d 8598d895ff996f54c602a296a6268fc2 253 Gene3D G3DSA:3.20.20.70 4 253 8.6E-95 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 syc0662_c d354087b4c4551556308fc73f94f305c 808 Pfam PF10150 Ribonuclease E/G family 167 438 8.9E-89 T 11-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 syc0662_c d354087b4c4551556308fc73f94f305c 808 Gene3D G3DSA:2.40.50.140 82 171 4.2E-25 T 11-10-2018 syc0662_c d354087b4c4551556308fc73f94f305c 808 SMART SM00316 87 165 1.7E-7 T 11-10-2018 IPR022967 RNA-binding domain, S1 syc0662_c d354087b4c4551556308fc73f94f305c 808 SUPERFAMILY SSF50249 89 171 3.18E-13 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold syc0662_c d354087b4c4551556308fc73f94f305c 808 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 67 463 3.0E-138 T 11-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 syc0226_c fc3650c53a463e00b310c27a59e4801b 130 Pfam PF07784 Protein of unknown function (DUF1622) 43 111 2.5E-23 T 11-10-2018 IPR012427 Protein of unknown function DUF1622 syc1031_c 0cf4ece5dffef112e48190f670ec099a 442 SUPERFAMILY SSF51338 1 429 2.75E-31 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 syc1031_c 0cf4ece5dffef112e48190f670ec099a 442 Gene3D G3DSA:3.20.20.140 58 406 8.1E-125 T 11-10-2018 syc1031_c 0cf4ece5dffef112e48190f670ec099a 442 ProSitePatterns PS00483 Dihydroorotase signature 2. 302 313 - T 11-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 syc1031_c 0cf4ece5dffef112e48190f670ec099a 442 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 21 422 8.1E-100 T 11-10-2018 syc1031_c 0cf4ece5dffef112e48190f670ec099a 442 SUPERFAMILY SSF51556 57 366 1.98E-93 T 11-10-2018 IPR032466 Metal-dependent hydrolase syc1031_c 0cf4ece5dffef112e48190f670ec099a 442 Pfam PF01979 Amidohydrolase family 54 420 8.6E-25 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 syc1031_c 0cf4ece5dffef112e48190f670ec099a 442 Gene3D G3DSA:2.30.40.10 6 421 8.1E-125 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 syc1571_d 1fd8fac3f1d19df0121f8cd84f3283f3 184 Gene3D G3DSA:3.40.30.10 55 160 1.3E-8 T 11-10-2018 syc1571_d 1fd8fac3f1d19df0121f8cd84f3283f3 184 SUPERFAMILY SSF52833 45 161 3.4E-13 T 11-10-2018 IPR036249 Thioredoxin-like superfamily syc1494_c 9d85829b49716058f1558f029eadaaa8 777 SUPERFAMILY SSF55326 407 589 1.44E-57 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily syc1494_c 9d85829b49716058f1558f029eadaaa8 777 PIRSF PIRSF001587 5 777 2.0E-290 T 11-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 syc1494_c 9d85829b49716058f1558f029eadaaa8 777 Gene3D G3DSA:3.30.1330.10 402 585 1.7E-63 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily syc1494_c 9d85829b49716058f1558f029eadaaa8 777 SUPERFAMILY SSF55326 17 197 2.54E-54 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily syc1494_c 9d85829b49716058f1558f029eadaaa8 777 Gene3D G3DSA:3.30.1330.10 45 194 7.5E-132 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily syc1494_c 9d85829b49716058f1558f029eadaaa8 777 Gene3D G3DSA:3.90.650.10 30 366 7.5E-132 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily syc1494_c 9d85829b49716058f1558f029eadaaa8 777 Hamap MF_00420 Phosphoribosylformylglycinamidine synthase subunit PurL [purL]. 1 777 326.155 T 11-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 syc1494_c 9d85829b49716058f1558f029eadaaa8 777 Pfam PF02769 AIR synthase related protein, C-terminal domain 204 355 3.6E-33 T 11-10-2018 IPR010918 PurM-like, C-terminal domain syc1494_c 9d85829b49716058f1558f029eadaaa8 777 Pfam PF02769 AIR synthase related protein, C-terminal domain 597 742 5.0E-15 T 11-10-2018 IPR010918 PurM-like, C-terminal domain syc1494_c 9d85829b49716058f1558f029eadaaa8 777 TIGRFAM TIGR01736 FGAM_synth_II: phosphoribosylformylglycinamidine synthase II 20 772 1.9E-268 T 11-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 syc1494_c 9d85829b49716058f1558f029eadaaa8 777 SUPERFAMILY SSF56042 201 436 7.03E-53 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily syc1494_c 9d85829b49716058f1558f029eadaaa8 777 Pfam PF00586 AIR synthase related protein, N-terminal domain 89 190 1.0E-24 T 11-10-2018 IPR016188 PurM-like, N-terminal domain syc1494_c 9d85829b49716058f1558f029eadaaa8 777 Pfam PF00586 AIR synthase related protein, N-terminal domain 465 583 3.4E-27 T 11-10-2018 IPR016188 PurM-like, N-terminal domain syc1494_c 9d85829b49716058f1558f029eadaaa8 777 Gene3D G3DSA:3.90.650.10 591 775 2.8E-36 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily syc1494_c 9d85829b49716058f1558f029eadaaa8 777 SUPERFAMILY SSF56042 592 772 2.09E-38 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily syc0889_d 041cfc23607747576c25551681fa6386 81 Hamap MF_00422 Protein translocase subunit SecE [secE]. 23 79 10.805 T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 syc0889_d 041cfc23607747576c25551681fa6386 81 Gene3D G3DSA:1.20.5.1030 23 78 3.0E-14 T 11-10-2018 IPR038379 SecE superfamily syc0889_d 041cfc23607747576c25551681fa6386 81 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 26 81 8.4E-17 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 syc0889_d 041cfc23607747576c25551681fa6386 81 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 27 75 2.5E-15 T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 syc0889_d 041cfc23607747576c25551681fa6386 81 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 28 56 - T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 syc1403_c e4b18d8d68e32ee10d4cfc3e8a940397 444 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 290 312 8.7E-12 T 11-10-2018 syc1403_c e4b18d8d68e32ee10d4cfc3e8a940397 444 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 8.7E-12 T 11-10-2018 syc1403_c e4b18d8d68e32ee10d4cfc3e8a940397 444 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 161 179 8.7E-12 T 11-10-2018 syc1403_c e4b18d8d68e32ee10d4cfc3e8a940397 444 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 101 119 8.7E-12 T 11-10-2018 syc1403_c e4b18d8d68e32ee10d4cfc3e8a940397 444 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 9 333 9.9E-54 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 syc1403_c e4b18d8d68e32ee10d4cfc3e8a940397 444 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 305 312 6.5E-8 T 11-10-2018 syc1403_c e4b18d8d68e32ee10d4cfc3e8a940397 444 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 161 186 6.5E-8 T 11-10-2018 syc1403_c e4b18d8d68e32ee10d4cfc3e8a940397 444 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 9 31 6.5E-8 T 11-10-2018 syc1403_c e4b18d8d68e32ee10d4cfc3e8a940397 444 Gene3D G3DSA:3.50.50.100 2 407 9.4E-123 T 11-10-2018 syc1403_c e4b18d8d68e32ee10d4cfc3e8a940397 444 SUPERFAMILY SSF51905 5 343 1.13E-35 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc2091_c 2c4e2203b562dcbe6b0b1bd1bb8f1955 196 Gene3D G3DSA:1.10.10.10 99 193 3.5E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily syc2091_c 2c4e2203b562dcbe6b0b1bd1bb8f1955 196 SUPERFAMILY SSF88659 131 192 1.01E-15 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like syc2091_c 2c4e2203b562dcbe6b0b1bd1bb8f1955 196 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 30 191 2.6E-33 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 syc2091_c 2c4e2203b562dcbe6b0b1bd1bb8f1955 196 Gene3D G3DSA:1.10.1740.10 15 98 1.6E-24 T 11-10-2018 syc2091_c 2c4e2203b562dcbe6b0b1bd1bb8f1955 196 SUPERFAMILY SSF88946 12 112 5.65E-22 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 syc2091_c 2c4e2203b562dcbe6b0b1bd1bb8f1955 196 Pfam PF04542 Sigma-70 region 2 34 102 4.4E-17 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 syc2091_c 2c4e2203b562dcbe6b0b1bd1bb8f1955 196 Pfam PF04545 Sigma-70, region 4 140 189 5.4E-15 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 syc1963_c 837b2aad24ca292b3174bffb2d78bef9 134 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 115 126 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site syc1963_c 837b2aad24ca292b3174bffb2d78bef9 134 SUPERFAMILY SSF54862 55 130 6.28E-19 T 11-10-2018 syc1963_c 837b2aad24ca292b3174bffb2d78bef9 134 Pfam PF00037 4Fe-4S binding domain 77 100 7.2E-9 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain syc1963_c 837b2aad24ca292b3174bffb2d78bef9 134 Gene3D G3DSA:3.30.70.260 1 76 1.1E-8 T 11-10-2018 syc1963_c 837b2aad24ca292b3174bffb2d78bef9 134 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 84 95 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site syc1963_c 837b2aad24ca292b3174bffb2d78bef9 134 Gene3D G3DSA:3.30.70.20 77 133 1.1E-12 T 11-10-2018 syc1963_c 837b2aad24ca292b3174bffb2d78bef9 134 Pfam PF09383 NIL domain 4 70 4.9E-11 T 11-10-2018 IPR018449 NIL domain syc1963_c 837b2aad24ca292b3174bffb2d78bef9 134 SUPERFAMILY SSF55021 3 70 9.81E-12 T 11-10-2018 syc1963_c 837b2aad24ca292b3174bffb2d78bef9 134 SMART SM00930 1 73 7.4E-17 T 11-10-2018 IPR018449 NIL domain syc1708_d 15339391cd936050fa496041fe8c578f 175 Pfam PF12527 Protein of unknown function (DUF3727) 80 172 1.5E-26 T 11-10-2018 IPR022203 Protein of unknown function DUF3727 syc1708_d 15339391cd936050fa496041fe8c578f 175 Pfam PF06949 Protein of unknown function (DUF1292) 12 68 1.8E-4 T 11-10-2018 IPR009711 Uncharacterised protein family UPF0473 syc0006_c 95945fa435cb35f2bae81bf54e225a51 439 Gene3D G3DSA:2.60.120.580 106 271 9.8E-47 T 11-10-2018 syc0006_c 95945fa435cb35f2bae81bf54e225a51 439 Gene3D G3DSA:3.10.28.20 360 438 4.0E-11 T 11-10-2018 syc0006_c 95945fa435cb35f2bae81bf54e225a51 439 Gene3D G3DSA:3.10.28.20 278 356 1.1E-18 T 11-10-2018 syc0006_c 95945fa435cb35f2bae81bf54e225a51 439 Pfam PF03069 Acetamidase/Formamidase family 207 277 1.1E-17 T 11-10-2018 IPR004304 Acetamidase/Formamidase GO:0016811 syc0006_c 95945fa435cb35f2bae81bf54e225a51 439 Pfam PF03069 Acetamidase/Formamidase family 69 202 2.5E-15 T 11-10-2018 IPR004304 Acetamidase/Formamidase GO:0016811 syc0006_c 95945fa435cb35f2bae81bf54e225a51 439 SUPERFAMILY SSF141130 53 354 6.15E-85 T 11-10-2018 syc0006_c 95945fa435cb35f2bae81bf54e225a51 439 SUPERFAMILY SSF141130 360 437 1.57E-11 T 11-10-2018 syc0006_c 95945fa435cb35f2bae81bf54e225a51 439 Gene3D G3DSA:2.40.10.120 142 190 9.8E-47 T 11-10-2018 syc0043_d e901958a7291cf6d237b51e368febafe 436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 367 7.3E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 syc0043_d e901958a7291cf6d237b51e368febafe 436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 371 381 7.3E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 syc0043_d e901958a7291cf6d237b51e368febafe 436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 426 7.3E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 syc0043_d e901958a7291cf6d237b51e368febafe 436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 407 7.3E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 syc0043_d e901958a7291cf6d237b51e368febafe 436 Gene3D G3DSA:3.30.565.10 273 434 6.2E-42 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily syc0043_d e901958a7291cf6d237b51e368febafe 436 SMART SM00387 316 429 5.1E-38 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase syc0043_d e901958a7291cf6d237b51e368febafe 436 SUPERFAMILY SSF55874 256 430 5.37E-44 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily syc0043_d e901958a7291cf6d237b51e368febafe 436 Pfam PF00512 His Kinase A (phospho-acceptor) domain 201 267 3.8E-18 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 syc0043_d e901958a7291cf6d237b51e368febafe 436 SUPERFAMILY SSF47384 193 267 3.14E-15 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 syc0043_d e901958a7291cf6d237b51e368febafe 436 Gene3D G3DSA:1.10.287.130 195 268 2.1E-14 T 11-10-2018 syc0043_d e901958a7291cf6d237b51e368febafe 436 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 318 428 1.8E-25 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase syc0043_d e901958a7291cf6d237b51e368febafe 436 SMART SM00388 200 267 6.6E-20 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 syc0599_c 067f23ba585ca183c1a3c2cc0732ecd8 422 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 239 276 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 syc0599_c 067f23ba585ca183c1a3c2cc0732ecd8 422 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 27 415 1.1E-150 T 11-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 syc0599_c 067f23ba585ca183c1a3c2cc0732ecd8 422 Gene3D G3DSA:3.40.640.10 70 320 7.5E-140 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 syc0599_c 067f23ba585ca183c1a3c2cc0732ecd8 422 Gene3D G3DSA:3.90.1150.10 35 409 7.5E-140 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 syc0599_c 067f23ba585ca183c1a3c2cc0732ecd8 422 SUPERFAMILY SSF53383 27 416 8.9E-122 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase syc0599_c 067f23ba585ca183c1a3c2cc0732ecd8 422 Pfam PF00202 Aminotransferase class-III 32 416 1.2E-112 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 syc0599_c 067f23ba585ca183c1a3c2cc0732ecd8 422 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 26 419 68.645 T 11-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 syc0599_c 067f23ba585ca183c1a3c2cc0732ecd8 422 PIRSF PIRSF000521 4 176 8.9E-10 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 syc0599_c 067f23ba585ca183c1a3c2cc0732ecd8 422 PIRSF PIRSF000521 182 419 6.3E-39 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 syc1362_d bc3f2b6e8dc0a119118536580c6e2e5e 326 Pfam PF02779 Transketolase, pyrimidine binding domain 8 177 2.9E-46 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain syc1362_d bc3f2b6e8dc0a119118536580c6e2e5e 326 SUPERFAMILY SSF52922 186 322 4.19E-42 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 syc1362_d bc3f2b6e8dc0a119118536580c6e2e5e 326 SMART SM00861 4 178 6.8E-55 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain syc1362_d bc3f2b6e8dc0a119118536580c6e2e5e 326 Pfam PF02780 Transketolase, C-terminal domain 193 314 5.5E-42 T 11-10-2018 IPR033248 Transketolase, C-terminal domain syc1362_d bc3f2b6e8dc0a119118536580c6e2e5e 326 Gene3D G3DSA:3.40.50.920 191 324 2.6E-45 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 syc1362_d bc3f2b6e8dc0a119118536580c6e2e5e 326 Gene3D G3DSA:3.40.50.970 1 190 2.3E-75 T 11-10-2018 syc1362_d bc3f2b6e8dc0a119118536580c6e2e5e 326 SUPERFAMILY SSF52518 6 202 3.53E-66 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold syc2482_c 924eca66b465cb148948ff84be336d67 301 TIGRFAM TIGR00761 argB: acetylglutamate kinase 31 265 1.2E-85 T 11-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 syc2482_c 924eca66b465cb148948ff84be336d67 301 Hamap MF_00082 Acetylglutamate kinase [argB]. 29 283 51.248 T 11-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 syc2482_c 924eca66b465cb148948ff84be336d67 301 SUPERFAMILY SSF53633 11 291 4.84E-93 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily syc2482_c 924eca66b465cb148948ff84be336d67 301 Pfam PF00696 Amino acid kinase family 31 267 7.9E-49 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 syc2482_c 924eca66b465cb148948ff84be336d67 301 PRINTS PR00474 Glutamate 5-kinase family signature 61 75 3.7E-9 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 syc2482_c 924eca66b465cb148948ff84be336d67 301 PRINTS PR00474 Glutamate 5-kinase family signature 240 260 3.7E-9 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 syc2482_c 924eca66b465cb148948ff84be336d67 301 PRINTS PR00474 Glutamate 5-kinase family signature 155 176 3.7E-9 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 syc2482_c 924eca66b465cb148948ff84be336d67 301 PRINTS PR00474 Glutamate 5-kinase family signature 187 214 3.7E-9 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 syc2482_c 924eca66b465cb148948ff84be336d67 301 Gene3D G3DSA:3.40.1160.10 8 301 1.2E-109 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily syc2482_c 924eca66b465cb148948ff84be336d67 301 PIRSF PIRSF000728 15 290 4.1E-112 T 11-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 syc0243_c 54943ee5f7127a773384649d674ff845 323 Gene3D G3DSA:1.10.10.10 1 86 1.3E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily syc0243_c 54943ee5f7127a773384649d674ff845 323 Gene3D G3DSA:3.40.190.290 93 301 2.3E-45 T 11-10-2018 syc0243_c 54943ee5f7127a773384649d674ff845 323 Pfam PF03466 LysR substrate binding domain 92 294 2.3E-50 T 11-10-2018 IPR005119 LysR, substrate-binding syc0243_c 54943ee5f7127a773384649d674ff845 323 SUPERFAMILY SSF53850 93 301 1.34E-45 T 11-10-2018 syc0243_c 54943ee5f7127a773384649d674ff845 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 6.4E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 syc0243_c 54943ee5f7127a773384649d674ff845 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 6.4E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 syc0243_c 54943ee5f7127a773384649d674ff845 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 6.4E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 syc0243_c 54943ee5f7127a773384649d674ff845 323 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 8.9E-20 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 syc0243_c 54943ee5f7127a773384649d674ff845 323 SUPERFAMILY SSF46785 3 81 6.1E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily syc1475_d 606e6945e1dfd253cf80b57fbc8ccba4 401 Gene3D G3DSA:2.160.20.100 270 388 9.4E-15 T 11-10-2018 syc1475_d 606e6945e1dfd253cf80b57fbc8ccba4 401 Pfam PF00805 Pentapeptide repeats (8 copies) 296 323 3.0E-7 T 11-10-2018 IPR001646 Pentapeptide repeat syc1475_d 606e6945e1dfd253cf80b57fbc8ccba4 401 SUPERFAMILY SSF141571 272 363 2.35E-13 T 11-10-2018 syc1025_d 00c6b05485ead9192a014aabd0dc9396 181 Pfam PF09722 Protein of unknown function (DUF2384) 134 178 3.1E-14 T 11-10-2018 IPR024467 Domain of unknown function DUF2384 syc1589_d 7991abf797a903e45b4cbe46c3e5ea70 465 Pfam PF00534 Glycosyl transferases group 1 268 406 9.3E-15 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 syc1589_d 7991abf797a903e45b4cbe46c3e5ea70 465 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 1 453 1.0E-157 T 11-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 syc1589_d 7991abf797a903e45b4cbe46c3e5ea70 465 Gene3D G3DSA:3.40.50.2000 3 451 2.6E-159 T 11-10-2018 syc1589_d 7991abf797a903e45b4cbe46c3e5ea70 465 SUPERFAMILY SSF53756 2 457 5.02E-122 T 11-10-2018 syc1589_d 7991abf797a903e45b4cbe46c3e5ea70 465 Pfam PF08323 Starch synthase catalytic domain 2 214 3.1E-67 T 11-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 syc1589_d 7991abf797a903e45b4cbe46c3e5ea70 465 Gene3D G3DSA:3.40.50.2000 229 436 2.6E-159 T 11-10-2018 syc1589_d 7991abf797a903e45b4cbe46c3e5ea70 465 Hamap MF_00484 Glycogen synthase [glgA]. 1 454 41.376 T 11-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 syc0387_c 819a88687b8361b92afb4ff5b6263a47 391 Gene3D G3DSA:1.20.1250.20 203 386 2.8E-20 T 11-10-2018 syc0387_c 819a88687b8361b92afb4ff5b6263a47 391 SUPERFAMILY SSF103473 7 388 9.55E-31 T 11-10-2018 IPR036259 MFS transporter superfamily syc0387_c 819a88687b8361b92afb4ff5b6263a47 391 Gene3D G3DSA:1.20.1250.20 11 197 1.1E-17 T 11-10-2018 syc0387_c 819a88687b8361b92afb4ff5b6263a47 391 Pfam PF07690 Major Facilitator Superfamily 19 354 2.4E-16 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 syc0611_c 31647e6d11b3ede10dca8193bcfdb3da 268 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 140 174 0.0011 T 11-10-2018 IPR001451 Hexapeptide repeat syc0611_c 31647e6d11b3ede10dca8193bcfdb3da 268 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 15 49 4.4E-9 T 11-10-2018 IPR001451 Hexapeptide repeat syc0611_c 31647e6d11b3ede10dca8193bcfdb3da 268 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 105 133 6.7E-5 T 11-10-2018 IPR001451 Hexapeptide repeat syc0611_c 31647e6d11b3ede10dca8193bcfdb3da 268 PIRSF PIRSF000456 2 265 3.2E-96 T 11-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 syc0611_c 31647e6d11b3ede10dca8193bcfdb3da 268 Gene3D G3DSA:1.20.1180.10 193 262 7.5E-14 T 11-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 syc0611_c 31647e6d11b3ede10dca8193bcfdb3da 268 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 149 177 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 syc0611_c 31647e6d11b3ede10dca8193bcfdb3da 268 Gene3D G3DSA:2.160.10.10 1 191 2.4E-50 T 11-10-2018 syc0611_c 31647e6d11b3ede10dca8193bcfdb3da 268 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 176 262 2.6E-25 T 11-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 syc0611_c 31647e6d11b3ede10dca8193bcfdb3da 268 SUPERFAMILY SSF51161 3 244 2.45E-70 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily syc0611_c 31647e6d11b3ede10dca8193bcfdb3da 268 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 5 256 3.9E-94 T 11-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 syc1313_d e8c45643e2549fe8f81c945f5bf30c5a 478 SUPERFAMILY SSF51905 157 346 1.15E-16 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc1313_d e8c45643e2549fe8f81c945f5bf30c5a 478 Gene3D G3DSA:3.50.50.100 8 408 1.7E-93 T 11-10-2018 syc1313_d e8c45643e2549fe8f81c945f5bf30c5a 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 294 316 9.1E-8 T 11-10-2018 syc1313_d e8c45643e2549fe8f81c945f5bf30c5a 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 104 122 9.1E-8 T 11-10-2018 syc1313_d e8c45643e2549fe8f81c945f5bf30c5a 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 164 182 9.1E-8 T 11-10-2018 syc1313_d e8c45643e2549fe8f81c945f5bf30c5a 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 9.1E-8 T 11-10-2018 syc1313_d e8c45643e2549fe8f81c945f5bf30c5a 478 SUPERFAMILY SSF51905 11 211 2.1E-27 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc1313_d e8c45643e2549fe8f81c945f5bf30c5a 478 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 11 334 6.3E-32 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 syc1822_c 1eb4effa5832a16dfa54ca4fea9d4b76 715 SUPERFAMILY SSF52540 11 147 2.93E-18 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc1822_c 1eb4effa5832a16dfa54ca4fea9d4b76 715 Gene3D G3DSA:3.40.50.300 14 166 2.4E-33 T 11-10-2018 syc1822_c 1eb4effa5832a16dfa54ca4fea9d4b76 715 Pfam PF13671 AAA domain 15 141 1.8E-20 T 11-10-2018 syc1822_c 1eb4effa5832a16dfa54ca4fea9d4b76 715 Pfam PF13280 WYL domain 472 703 5.5E-16 T 11-10-2018 IPR026881 WYL domain syc1503_d 3bb7a8eb457093d14188b831de8707b0 265 Gene3D G3DSA:3.60.10.10 1 263 4.4E-75 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily syc1503_d 3bb7a8eb457093d14188b831de8707b0 265 SUPERFAMILY SSF56219 1 262 1.44E-79 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily syc1503_d 3bb7a8eb457093d14188b831de8707b0 265 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 255 3.4E-18 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase syc1503_d 3bb7a8eb457093d14188b831de8707b0 265 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 262 2.3E-91 T 11-10-2018 syc1503_d 3bb7a8eb457093d14188b831de8707b0 265 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 262 2.3E-82 T 11-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 syc1871_d 78cebc3aa9702f55b25aac5ae5a5aa20 244 Gene3D G3DSA:3.30.300.20 17 110 5.0E-28 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta syc1871_d 78cebc3aa9702f55b25aac5ae5a5aa20 244 ProSitePatterns PS00548 Ribosomal protein S3 signature. 166 200 - T 11-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc1871_d 78cebc3aa9702f55b25aac5ae5a5aa20 244 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 212 2.2E-90 T 11-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 syc1871_d 78cebc3aa9702f55b25aac5ae5a5aa20 244 SMART SM00322 60 128 1.4E-6 T 11-10-2018 IPR004087 K Homology domain GO:0003676 syc1871_d 78cebc3aa9702f55b25aac5ae5a5aa20 244 Gene3D G3DSA:3.30.1140.32 112 211 5.0E-42 T 11-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc1871_d 78cebc3aa9702f55b25aac5ae5a5aa20 244 SUPERFAMILY SSF54821 112 209 6.02E-38 T 11-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc1871_d 78cebc3aa9702f55b25aac5ae5a5aa20 244 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 209 38.972 T 11-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 syc1871_d 78cebc3aa9702f55b25aac5ae5a5aa20 244 Pfam PF00189 Ribosomal protein S3, C-terminal domain 123 205 3.0E-38 T 11-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc1871_d 78cebc3aa9702f55b25aac5ae5a5aa20 244 Pfam PF07650 KH domain 38 112 1.4E-17 T 11-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc1871_d 78cebc3aa9702f55b25aac5ae5a5aa20 244 SUPERFAMILY SSF54814 2 109 4.97E-34 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 syc1619_c 1e0efe811e5342973e2278444f7cea58 72 Hamap MF_01354 NAD(P)H-quinone oxidoreductase subunit O [ndhO]. 3 71 24.26 T 11-10-2018 IPR020905 NAD(P)H-quinone oxidoreductase subunit O GO:0005886|GO:0016655|GO:0055114 syc1619_c 1e0efe811e5342973e2278444f7cea58 72 Pfam PF11910 Cyanobacterial and plant NDH-1 subunit O 5 69 2.6E-30 T 11-10-2018 IPR020905 NAD(P)H-quinone oxidoreductase subunit O GO:0005886|GO:0016655|GO:0055114 syc2320_c dfc380639b609cf6cd337c813beaef01 82 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 74 22.083 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc2320_c dfc380639b609cf6cd337c813beaef01 82 Pfam PF00886 Ribosomal protein S16 8 64 4.6E-17 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc2320_c dfc380639b609cf6cd337c813beaef01 82 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 11-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc2320_c dfc380639b609cf6cd337c813beaef01 82 SUPERFAMILY SSF54565 1 80 1.44E-26 T 11-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc2320_c dfc380639b609cf6cd337c813beaef01 82 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 77 1.8E-30 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc2320_c dfc380639b609cf6cd337c813beaef01 82 Gene3D G3DSA:3.30.1320.10 1 82 5.2E-26 T 11-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc1892_d 023ea757c77a70770ef1ad5f7ab36f42 135 SUPERFAMILY SSF54211 10 135 3.64E-45 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold syc1892_d 023ea757c77a70770ef1ad5f7ab36f42 135 Pfam PF00380 Ribosomal protein S9/S16 14 135 2.8E-43 T 11-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 syc1892_d 023ea757c77a70770ef1ad5f7ab36f42 135 ProSitePatterns PS00360 Ribosomal protein S9 signature. 74 92 - T 11-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 syc1892_d 023ea757c77a70770ef1ad5f7ab36f42 135 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 5 135 34.909 T 11-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid syc1892_d 023ea757c77a70770ef1ad5f7ab36f42 135 Gene3D G3DSA:3.30.230.10 6 135 9.3E-48 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup syc1745_c 2819420dcefcb5c71a7d7499385e078e 276 SUPERFAMILY SSF56317 1 267 6.15E-78 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily syc1745_c 2819420dcefcb5c71a7d7499385e078e 276 Gene3D G3DSA:3.60.110.10 5 269 2.7E-88 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily syc1745_c 2819420dcefcb5c71a7d7499385e078e 276 Pfam PF00795 Carbon-nitrogen hydrolase 5 258 1.0E-60 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 syc0329_d 32c46e55d1e12f638784d1423b942637 125 SMART SM00448 2 115 6.6E-36 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 syc0329_d 32c46e55d1e12f638784d1423b942637 125 SUPERFAMILY SSF52172 1 120 6.55E-36 T 11-10-2018 IPR011006 CheY-like superfamily syc0329_d 32c46e55d1e12f638784d1423b942637 125 Gene3D G3DSA:3.40.50.12740 1 125 5.1E-38 T 11-10-2018 syc0329_d 32c46e55d1e12f638784d1423b942637 125 Pfam PF00072 Response regulator receiver domain 4 114 1.5E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 syc2032_d 8f20d748e03eadb9873b686054c2c050 89 Gene3D G3DSA:2.30.30.660 1 89 1.1E-43 T 11-10-2018 syc2032_d 8f20d748e03eadb9873b686054c2c050 89 Pfam PF12058 Protein of unknown function (DUF3539) 3 88 1.7E-40 T 11-10-2018 IPR021926 Protein of unknown function DUF3539 syc0524_d b51b6e3585f1234086d74333b3a32d5d 262 Pfam PF07082 Protein of unknown function (DUF1350) 6 251 2.4E-78 T 11-10-2018 IPR010765 Protein of unknown function DUF1350 syc0524_d b51b6e3585f1234086d74333b3a32d5d 262 Gene3D G3DSA:3.40.50.1820 7 261 1.7E-6 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold syc0524_d b51b6e3585f1234086d74333b3a32d5d 262 SUPERFAMILY SSF53474 16 148 1.64E-7 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold syc1407_d 12759b46487765aac77d7c50b71a7f69 1263 Pfam PF02514 CobN/Magnesium Chelatase 140 1233 0.0 T 11-10-2018 IPR003672 CobN/magnesium chelatase GO:0009058 syc1407_d 12759b46487765aac77d7c50b71a7f69 1263 TIGRFAM TIGR02257 cobalto_cobN: cobaltochelatase, CobN subunit 1 1248 0.0 T 11-10-2018 IPR011953 Cobaltochelatase, CobN subunit GO:0009236|GO:0051116 syc2254_d f0adb2ad965a78b195f757c4e0dd9560 171 Pfam PF00805 Pentapeptide repeats (8 copies) 65 96 8.7E-11 T 11-10-2018 IPR001646 Pentapeptide repeat syc2254_d f0adb2ad965a78b195f757c4e0dd9560 171 Pfam PF00805 Pentapeptide repeats (8 copies) 103 132 2.5E-5 T 11-10-2018 IPR001646 Pentapeptide repeat syc2254_d f0adb2ad965a78b195f757c4e0dd9560 171 SUPERFAMILY SSF141571 40 144 1.83E-23 T 11-10-2018 syc2254_d f0adb2ad965a78b195f757c4e0dd9560 171 Gene3D G3DSA:2.160.20.100 39 170 2.0E-37 T 11-10-2018 syc0863_d 321f55f6164a9cec88bdd6371ef22b01 248 Gene3D G3DSA:3.40.50.10310 1 248 1.9E-74 T 11-10-2018 IPR024087 Creatininase-like superfamily KEGG: 00740+3.5.1.102|MetaCyc: PWY-6167 syc0863_d 321f55f6164a9cec88bdd6371ef22b01 248 Pfam PF02633 Creatinine amidohydrolase 5 239 4.6E-60 T 11-10-2018 IPR003785 Creatininase/formamide hydrolase KEGG: 00740+3.5.1.102|MetaCyc: PWY-6167 syc0863_d 321f55f6164a9cec88bdd6371ef22b01 248 SUPERFAMILY SSF102215 1 244 1.18E-76 T 11-10-2018 IPR024087 Creatininase-like superfamily KEGG: 00740+3.5.1.102|MetaCyc: PWY-6167 syc1580_c 7b1912e0c9e3098eb6bc0873523201ad 251 PRINTS PR00395 Ribosomal protein S2 signature 37 46 1.6E-42 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc1580_c 7b1912e0c9e3098eb6bc0873523201ad 251 PRINTS PR00395 Ribosomal protein S2 signature 175 186 1.6E-42 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc1580_c 7b1912e0c9e3098eb6bc0873523201ad 251 PRINTS PR00395 Ribosomal protein S2 signature 6 24 1.6E-42 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc1580_c 7b1912e0c9e3098eb6bc0873523201ad 251 PRINTS PR00395 Ribosomal protein S2 signature 196 210 1.6E-42 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc1580_c 7b1912e0c9e3098eb6bc0873523201ad 251 PRINTS PR00395 Ribosomal protein S2 signature 158 175 1.6E-42 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc1580_c 7b1912e0c9e3098eb6bc0873523201ad 251 PRINTS PR00395 Ribosomal protein S2 signature 87 104 1.6E-42 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc1580_c 7b1912e0c9e3098eb6bc0873523201ad 251 Gene3D G3DSA:1.10.287.610 97 152 7.6E-90 T 11-10-2018 syc1580_c 7b1912e0c9e3098eb6bc0873523201ad 251 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 228 43.085 T 11-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc1580_c 7b1912e0c9e3098eb6bc0873523201ad 251 SUPERFAMILY SSF52313 6 233 6.15E-96 T 11-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily syc1580_c 7b1912e0c9e3098eb6bc0873523201ad 251 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 11-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 syc1580_c 7b1912e0c9e3098eb6bc0873523201ad 251 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 4 226 5.3E-105 T 11-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc1580_c 7b1912e0c9e3098eb6bc0873523201ad 251 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 11-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 syc1580_c 7b1912e0c9e3098eb6bc0873523201ad 251 Gene3D G3DSA:3.40.50.10490 10 215 7.6E-90 T 11-10-2018 syc1580_c 7b1912e0c9e3098eb6bc0873523201ad 251 Pfam PF00318 Ribosomal protein S2 9 224 1.1E-93 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc1386_c 0106a3cc376177ed382a68cfddba168c 494 SUPERFAMILY SSF55931 12 313 1.63E-116 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 syc1386_c 0106a3cc376177ed382a68cfddba168c 494 SMART SM00845 345 492 2.2E-78 T 11-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 syc1386_c 0106a3cc376177ed382a68cfddba168c 494 Pfam PF02934 GatB/GatE catalytic domain 13 303 1.8E-111 T 11-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 syc1386_c 0106a3cc376177ed382a68cfddba168c 494 Pfam PF02637 GatB domain 345 492 7.5E-54 T 11-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 syc1386_c 0106a3cc376177ed382a68cfddba168c 494 SUPERFAMILY SSF89095 314 420 2.75E-36 T 11-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 syc1386_c 0106a3cc376177ed382a68cfddba168c 494 Gene3D G3DSA:1.10.150.380 314 431 7.3E-40 T 11-10-2018 syc1386_c 0106a3cc376177ed382a68cfddba168c 494 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 9 492 6.9E-188 T 11-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 syc1386_c 0106a3cc376177ed382a68cfddba168c 494 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 161 175 - T 11-10-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 syc1386_c 0106a3cc376177ed382a68cfddba168c 494 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 10 493 38.671 T 11-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 syc1386_c 0106a3cc376177ed382a68cfddba168c 494 Gene3D G3DSA:1.10.10.410 432 494 5.3E-22 T 11-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal syc1828_d 7d7207109b91013354be2ebd4422f4e1 183 Pfam PF00293 NUDIX domain 46 167 4.2E-17 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 syc1828_d 7d7207109b91013354be2ebd4422f4e1 183 ProSitePatterns PS00893 Nudix box signature. 77 98 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 syc1828_d 7d7207109b91013354be2ebd4422f4e1 183 Gene3D G3DSA:3.90.79.10 3 182 1.1E-53 T 11-10-2018 syc1828_d 7d7207109b91013354be2ebd4422f4e1 183 SUPERFAMILY SSF55811 6 178 1.76E-48 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 syc1201_d 8c3466a0da39df7d337cc7291b69fee5 131 Gene3D G3DSA:3.40.1350.10 1 105 3.9E-26 T 11-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 syc1201_d 8c3466a0da39df7d337cc7291b69fee5 131 Pfam PF02021 Uncharacterised protein family UPF0102 1 89 2.9E-20 T 11-10-2018 IPR003509 Uncharacterised protein family UPF0102 syc1201_d 8c3466a0da39df7d337cc7291b69fee5 131 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 1 90 1.7E-20 T 11-10-2018 IPR003509 Uncharacterised protein family UPF0102 syc1201_d 8c3466a0da39df7d337cc7291b69fee5 131 SUPERFAMILY SSF52980 6 93 2.68E-11 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 syc2200_c 6a8084273b7251b72c36d3352accbf93 270 Gene3D G3DSA:2.60.120.620 17 247 1.0E-15 T 11-10-2018 syc2200_c 6a8084273b7251b72c36d3352accbf93 270 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 143 234 4.5E-6 T 11-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 syc1204_d a8d48606efda94d3e09f462ad7cdffa7 634 TIGRFAM TIGR01960 ndhF3_CO2: NAD(P)H dehydrogenase, subunit NdhF3 family 1 610 8.4E-275 T 11-10-2018 IPR010217 NAD(P)H dehydrogenase, subunit NdhF3 syc1204_d a8d48606efda94d3e09f462ad7cdffa7 634 Pfam PF00361 Proton-conducting membrane transporter 139 422 2.2E-51 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc1204_d a8d48606efda94d3e09f462ad7cdffa7 634 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 116 136 1.4E-20 T 11-10-2018 syc1204_d a8d48606efda94d3e09f462ad7cdffa7 634 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 319 331 1.4E-20 T 11-10-2018 syc1204_d a8d48606efda94d3e09f462ad7cdffa7 634 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 163 184 1.4E-20 T 11-10-2018 syc1204_d a8d48606efda94d3e09f462ad7cdffa7 634 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 88 113 1.4E-20 T 11-10-2018 syc1204_d a8d48606efda94d3e09f462ad7cdffa7 634 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 230 251 1.4E-20 T 11-10-2018 syc1204_d a8d48606efda94d3e09f462ad7cdffa7 634 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 71 126 1.0E-13 T 11-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc0315_d 5b99d7531dea65b4a71d2af169087001 729 SUPERFAMILY SSF53706 17 590 5.76E-187 T 11-10-2018 syc0315_d 5b99d7531dea65b4a71d2af169087001 729 Gene3D G3DSA:2.20.25.90 16 81 2.0E-12 T 11-10-2018 syc0315_d 5b99d7531dea65b4a71d2af169087001 729 Gene3D G3DSA:2.40.40.20 596 722 3.8E-42 T 11-10-2018 syc0315_d 5b99d7531dea65b4a71d2af169087001 729 SMART SM00926 16 82 1.4E-12 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc0315_d 5b99d7531dea65b4a71d2af169087001 729 Pfam PF01568 Molydopterin dinucleotide binding domain 606 717 1.2E-32 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 syc0315_d 5b99d7531dea65b4a71d2af169087001 729 Gene3D G3DSA:3.40.228.10 164 364 5.6E-182 T 11-10-2018 syc0315_d 5b99d7531dea65b4a71d2af169087001 729 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 645 672 - T 11-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 syc0315_d 5b99d7531dea65b4a71d2af169087001 729 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 17 81 2.6E-20 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc0315_d 5b99d7531dea65b4a71d2af169087001 729 Gene3D G3DSA:3.40.50.740 95 560 5.6E-182 T 11-10-2018 syc0315_d 5b99d7531dea65b4a71d2af169087001 729 Pfam PF00384 Molybdopterin oxidoreductase 84 512 7.2E-82 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc0315_d 5b99d7531dea65b4a71d2af169087001 729 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 21 39 - T 11-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 syc0315_d 5b99d7531dea65b4a71d2af169087001 729 SUPERFAMILY SSF50692 572 721 1.4E-45 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily syc1733_d df27df1ba51d30ef61665506b0d88fa1 349 Pfam PF07755 Domain of unknown function (DUF1611_C) P-loop domain 139 340 1.3E-73 T 11-10-2018 IPR035086 Domain of unknown function DUF1611, P-loop syc1733_d df27df1ba51d30ef61665506b0d88fa1 349 Gene3D G3DSA:3.40.50.300 133 346 6.0E-79 T 11-10-2018 syc1733_d df27df1ba51d30ef61665506b0d88fa1 349 PIRSF PIRSF026760 4 349 2.5E-92 T 11-10-2018 IPR011669 Uncharacterised conserved protein UCP026760 syc1733_d df27df1ba51d30ef61665506b0d88fa1 349 SUPERFAMILY SSF52540 2 345 8.23E-99 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc1733_d df27df1ba51d30ef61665506b0d88fa1 349 Pfam PF17396 Domain of unknown function (DUF1611_N) Rossmann-like domain 42 132 6.3E-25 T 11-10-2018 IPR035402 Domain of unknown function DUF1611-N, Rossmann-like domain syc1733_d df27df1ba51d30ef61665506b0d88fa1 349 Gene3D G3DSA:3.40.50.720 1 132 4.4E-36 T 11-10-2018 syc0563_d e69edd5bdb08ab4210ae7d84e9529c77 564 Gene3D G3DSA:3.40.50.300 135 301 1.6E-19 T 11-10-2018 syc0563_d e69edd5bdb08ab4210ae7d84e9529c77 564 Gene3D G3DSA:3.40.50.300 332 526 5.5E-45 T 11-10-2018 syc0563_d e69edd5bdb08ab4210ae7d84e9529c77 564 Pfam PF01935 Domain of unknown function DUF87 155 377 1.6E-52 T 11-10-2018 IPR002789 Helicase HerA, central domain syc0563_d e69edd5bdb08ab4210ae7d84e9529c77 564 SUPERFAMILY SSF52540 149 513 2.13E-33 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0460_c d869152bf8f5d0ec46bd8bfe0e25e50c 883 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 32 79 2.7E-12 T 11-10-2018 IPR004176 Clp, N-terminal syc0460_c d869152bf8f5d0ec46bd8bfe0e25e50c 883 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 105 156 4.8E-10 T 11-10-2018 IPR004176 Clp, N-terminal syc0460_c d869152bf8f5d0ec46bd8bfe0e25e50c 883 Gene3D G3DSA:1.10.1780.10 13 159 9.5E-32 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 syc0460_c d869152bf8f5d0ec46bd8bfe0e25e50c 883 Gene3D G3DSA:3.40.50.300 160 353 4.2E-76 T 11-10-2018 syc0460_c d869152bf8f5d0ec46bd8bfe0e25e50c 883 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 782 862 1.7E-27 T 11-10-2018 IPR019489 Clp ATPase, C-terminal syc0460_c d869152bf8f5d0ec46bd8bfe0e25e50c 883 Gene3D G3DSA:1.10.8.60 782 876 5.1E-31 T 11-10-2018 syc0460_c d869152bf8f5d0ec46bd8bfe0e25e50c 883 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 646 664 - T 11-10-2018 IPR028299 ClpA/B, conserved site 2 syc0460_c d869152bf8f5d0ec46bd8bfe0e25e50c 883 Pfam PF07724 AAA domain (Cdc48 subfamily) 611 775 2.2E-56 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 syc0460_c d869152bf8f5d0ec46bd8bfe0e25e50c 883 Gene3D G3DSA:3.40.50.300 354 559 3.2E-73 T 11-10-2018 syc0460_c d869152bf8f5d0ec46bd8bfe0e25e50c 883 SUPERFAMILY SSF52540 170 560 1.31E-99 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0460_c d869152bf8f5d0ec46bd8bfe0e25e50c 883 SUPERFAMILY SSF81923 16 167 2.06E-39 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 syc0460_c d869152bf8f5d0ec46bd8bfe0e25e50c 883 Gene3D G3DSA:3.40.50.300 565 780 5.6E-89 T 11-10-2018 syc0460_c d869152bf8f5d0ec46bd8bfe0e25e50c 883 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 305 317 - T 11-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 syc0460_c d869152bf8f5d0ec46bd8bfe0e25e50c 883 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 18 872 0.0 T 11-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 syc0460_c d869152bf8f5d0ec46bd8bfe0e25e50c 883 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 690 708 2.7E-43 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 syc0460_c d869152bf8f5d0ec46bd8bfe0e25e50c 883 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 616 634 2.7E-43 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 syc0460_c d869152bf8f5d0ec46bd8bfe0e25e50c 883 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 661 679 2.7E-43 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 syc0460_c d869152bf8f5d0ec46bd8bfe0e25e50c 883 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 723 737 2.7E-43 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 syc0460_c d869152bf8f5d0ec46bd8bfe0e25e50c 883 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 214 346 1.2E-12 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 syc0460_c d869152bf8f5d0ec46bd8bfe0e25e50c 883 SUPERFAMILY SSF52540 561 871 3.31E-88 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0460_c d869152bf8f5d0ec46bd8bfe0e25e50c 883 SMART SM01086 782 871 4.8E-39 T 11-10-2018 IPR019489 Clp ATPase, C-terminal syc0460_c d869152bf8f5d0ec46bd8bfe0e25e50c 883 SMART SM00382 209 353 5.8E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain syc0460_c d869152bf8f5d0ec46bd8bfe0e25e50c 883 SMART SM00382 612 768 4.5E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain syc1192_d 87beddd1b4e298a1203d25acf650a6f6 112 PRINTS PR00340 P-II protein signature 23 41 2.8E-44 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 syc1192_d 87beddd1b4e298a1203d25acf650a6f6 112 PRINTS PR00340 P-II protein signature 52 75 2.8E-44 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 syc1192_d 87beddd1b4e298a1203d25acf650a6f6 112 PRINTS PR00340 P-II protein signature 83 103 2.8E-44 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 syc1192_d 87beddd1b4e298a1203d25acf650a6f6 112 PRINTS PR00340 P-II protein signature 2 17 2.8E-44 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 syc1192_d 87beddd1b4e298a1203d25acf650a6f6 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 3.7E-43 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 syc1192_d 87beddd1b4e298a1203d25acf650a6f6 112 PIRSF PIRSF039144 1 112 5.8E-53 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 syc1192_d 87beddd1b4e298a1203d25acf650a6f6 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 11-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 syc1192_d 87beddd1b4e298a1203d25acf650a6f6 112 SUPERFAMILY SSF54913 1 112 1.37E-43 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta syc1192_d 87beddd1b4e298a1203d25acf650a6f6 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 11-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 syc1192_d 87beddd1b4e298a1203d25acf650a6f6 112 Gene3D G3DSA:3.30.70.120 1 112 1.0E-48 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal syc1192_d 87beddd1b4e298a1203d25acf650a6f6 112 SMART SM00938 4 105 7.3E-63 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 syc0101_c d0d2eb32ecce944c4d1898334c0cf125 293 Pfam PF00698 Acyl transferase domain 5 277 1.7E-38 T 11-10-2018 IPR014043 Acyl transferase syc0101_c d0d2eb32ecce944c4d1898334c0cf125 293 Gene3D G3DSA:3.40.366.10 6 272 2.2E-91 T 11-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 syc0101_c d0d2eb32ecce944c4d1898334c0cf125 293 SUPERFAMILY SSF55048 123 179 6.41E-12 T 11-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding syc0101_c d0d2eb32ecce944c4d1898334c0cf125 293 SUPERFAMILY SSF52151 4 291 1.96E-68 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase syc0101_c d0d2eb32ecce944c4d1898334c0cf125 293 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 278 5.4E-101 T 11-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 syc0101_c d0d2eb32ecce944c4d1898334c0cf125 293 Gene3D G3DSA:3.30.70.250 122 185 2.2E-91 T 11-10-2018 syc0101_c d0d2eb32ecce944c4d1898334c0cf125 293 PIRSF PIRSF000446 1 293 3.1E-96 T 11-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 syc0101_c d0d2eb32ecce944c4d1898334c0cf125 293 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 290 3.7E-40 T 11-10-2018 IPR020801 Polyketide synthase, acyl transferase domain syc0455_d 4a92af862f8159df4790bab73f164a31 205 Pfam PF03070 TENA/THI-4/PQQC family 8 177 8.5E-31 T 11-10-2018 IPR004305 Thiaminase-2/PQQC syc0455_d 4a92af862f8159df4790bab73f164a31 205 Gene3D G3DSA:1.20.910.10 1 204 7.8E-51 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 syc0455_d 4a92af862f8159df4790bab73f164a31 205 SUPERFAMILY SSF48613 2 201 1.2E-52 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 syc0977_c 36067647741a5ad4d447a67b2dd9f88d 99 Gene3D G3DSA:3.30.70.1060 10 99 2.5E-16 T 11-10-2018 syc0977_c 36067647741a5ad4d447a67b2dd9f88d 99 Pfam PF03795 YCII-related domain 13 95 4.3E-16 T 11-10-2018 IPR005545 YCII-related syc0977_c 36067647741a5ad4d447a67b2dd9f88d 99 SUPERFAMILY SSF54909 11 99 3.49E-25 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel syc1009_d c8397c1127055ce89183f2b4c741488e 325 TIGRFAM TIGR03144 cytochr_II_ccsB: cytochrome c-type biogenesis protein CcsB 45 322 3.0E-108 T 11-10-2018 IPR017562 Cytochrome c-type biogenesis protein CcsA GO:0017004 syc1009_d c8397c1127055ce89183f2b4c741488e 325 Pfam PF01578 Cytochrome C assembly protein 68 319 2.3E-79 T 11-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 syc1009_d c8397c1127055ce89183f2b4c741488e 325 Hamap MF_01391 Cytochrome c biogenesis protein CcsA [ccsA]. 1 325 30.271 T 11-10-2018 IPR017562 Cytochrome c-type biogenesis protein CcsA GO:0017004 syc0534_d 5e57d241c193abb27b4eb180e52dbddc 413 PRINTS PR00344 Bacterial sensor protein C-terminal signature 357 375 2.1E-5 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 syc0534_d 5e57d241c193abb27b4eb180e52dbddc 413 PRINTS PR00344 Bacterial sensor protein C-terminal signature 316 330 2.1E-5 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 syc0534_d 5e57d241c193abb27b4eb180e52dbddc 413 Gene3D G3DSA:1.10.287.130 164 233 3.1E-17 T 11-10-2018 syc0534_d 5e57d241c193abb27b4eb180e52dbddc 413 SUPERFAMILY SSF47384 156 233 5.69E-17 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 syc0534_d 5e57d241c193abb27b4eb180e52dbddc 413 SUPERFAMILY SSF55874 222 396 2.23E-35 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily syc0534_d 5e57d241c193abb27b4eb180e52dbddc 413 Pfam PF00989 PAS fold 51 154 3.7E-8 T 11-10-2018 IPR013767 PAS fold GO:0006355 syc0534_d 5e57d241c193abb27b4eb180e52dbddc 413 SMART SM00388 169 233 2.8E-20 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 syc0534_d 5e57d241c193abb27b4eb180e52dbddc 413 Gene3D G3DSA:3.30.565.10 238 396 2.7E-30 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily syc0534_d 5e57d241c193abb27b4eb180e52dbddc 413 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 279 397 8.5E-18 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase syc0534_d 5e57d241c193abb27b4eb180e52dbddc 413 SMART SM00387 279 398 1.2E-30 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase syc0534_d 5e57d241c193abb27b4eb180e52dbddc 413 Pfam PF00512 His Kinase A (phospho-acceptor) domain 170 233 3.6E-18 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 syc0534_d 5e57d241c193abb27b4eb180e52dbddc 413 SMART SM00091 50 115 8.1E-4 T 11-10-2018 IPR000014 PAS domain syc1188_d 00d5b24412f812c42dedafdc555aa634 67 PIRSF PIRSF000083 1 67 1.1E-40 T 11-10-2018 IPR011134 Allophycocyanin linker protein GO:0015979|GO:0030089 syc1188_d 00d5b24412f812c42dedafdc555aa634 67 SMART SM01094 1 56 2.1E-15 T 11-10-2018 IPR008213 CpcD-like domain GO:0030089 syc1188_d 00d5b24412f812c42dedafdc555aa634 67 Pfam PF01383 CpcD/allophycocyanin linker domain 2 54 6.2E-14 T 11-10-2018 IPR008213 CpcD-like domain GO:0030089 syc1188_d 00d5b24412f812c42dedafdc555aa634 67 SUPERFAMILY SSF54580 1 66 6.02E-34 T 11-10-2018 IPR011064 Allophycocyanin linker chain GO:0015979|GO:0030089 syc1188_d 00d5b24412f812c42dedafdc555aa634 67 Gene3D G3DSA:3.30.1490.170 1 55 4.6E-32 T 11-10-2018 IPR011064 Allophycocyanin linker chain GO:0015979|GO:0030089 syc1296_d 0b71753b4716f29bbafa157114de7c5d 338 SUPERFAMILY SSF50129 1 156 1.38E-36 T 11-10-2018 IPR011032 GroES-like superfamily syc1296_d 0b71753b4716f29bbafa157114de7c5d 338 Gene3D G3DSA:3.40.50.720 134 280 1.2E-90 T 11-10-2018 syc1296_d 0b71753b4716f29bbafa157114de7c5d 338 SUPERFAMILY SSF51735 123 250 4.0E-42 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily syc1296_d 0b71753b4716f29bbafa157114de7c5d 338 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 34 93 1.5E-7 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 syc1296_d 0b71753b4716f29bbafa157114de7c5d 338 SMART SM00829 15 334 1.1E-37 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 syc1296_d 0b71753b4716f29bbafa157114de7c5d 338 Gene3D G3DSA:3.90.180.10 15 329 1.2E-90 T 11-10-2018 syc1296_d 0b71753b4716f29bbafa157114de7c5d 338 Pfam PF13602 Zinc-binding dehydrogenase 195 334 8.7E-28 T 11-10-2018 syc1040_d 5ce883cd1c075788d297e04bdfff7ed2 637 Gene3D G3DSA:3.30.70.3380 406 517 3.0E-40 T 11-10-2018 syc1040_d 5ce883cd1c075788d297e04bdfff7ed2 637 PRINTS PR00315 GTP-binding elongation factor signature 44 57 1.0E-12 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 syc1040_d 5ce883cd1c075788d297e04bdfff7ed2 637 PRINTS PR00315 GTP-binding elongation factor signature 164 173 1.0E-12 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 syc1040_d 5ce883cd1c075788d297e04bdfff7ed2 637 PRINTS PR00315 GTP-binding elongation factor signature 87 95 1.0E-12 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 syc1040_d 5ce883cd1c075788d297e04bdfff7ed2 637 PRINTS PR00315 GTP-binding elongation factor signature 112 122 1.0E-12 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 syc1040_d 5ce883cd1c075788d297e04bdfff7ed2 637 PRINTS PR00315 GTP-binding elongation factor signature 128 139 1.0E-12 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 syc1040_d 5ce883cd1c075788d297e04bdfff7ed2 637 SMART SM00838 436 525 0.0011 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like syc1040_d 5ce883cd1c075788d297e04bdfff7ed2 637 Gene3D G3DSA:3.30.70.870 324 405 1.0E-36 T 11-10-2018 syc1040_d 5ce883cd1c075788d297e04bdfff7ed2 637 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 41 210 5.1E-20 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 syc1040_d 5ce883cd1c075788d297e04bdfff7ed2 637 Pfam PF06421 GTP-binding protein LepA C-terminus 526 632 7.1E-49 T 11-10-2018 IPR013842 GTP-binding protein LepA, C-terminal syc1040_d 5ce883cd1c075788d297e04bdfff7ed2 637 SUPERFAMILY SSF52540 38 267 8.64E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc1040_d 5ce883cd1c075788d297e04bdfff7ed2 637 Pfam PF00009 Elongation factor Tu GTP binding domain 41 219 2.0E-53 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 syc1040_d 5ce883cd1c075788d297e04bdfff7ed2 637 TIGRFAM TIGR01393 lepA: elongation factor 4 41 634 1.1E-301 T 11-10-2018 IPR006297 Elongation factor 4 GO:0005525 syc1040_d 5ce883cd1c075788d297e04bdfff7ed2 637 Pfam PF03144 Elongation factor Tu domain 2 243 313 4.0E-11 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 syc1040_d 5ce883cd1c075788d297e04bdfff7ed2 637 Pfam PF00679 Elongation factor G C-terminus 437 523 1.0E-23 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like syc1040_d 5ce883cd1c075788d297e04bdfff7ed2 637 Gene3D G3DSA:2.40.30.10 225 323 8.7E-39 T 11-10-2018 syc1040_d 5ce883cd1c075788d297e04bdfff7ed2 637 Gene3D G3DSA:3.40.50.300 38 223 1.1E-74 T 11-10-2018 syc1040_d 5ce883cd1c075788d297e04bdfff7ed2 637 SUPERFAMILY SSF54980 437 532 5.28E-25 T 11-10-2018 IPR035647 EF-G domain III/V-like syc1040_d 5ce883cd1c075788d297e04bdfff7ed2 637 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 80 95 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site syc1040_d 5ce883cd1c075788d297e04bdfff7ed2 637 SUPERFAMILY SSF54980 330 408 1.76E-19 T 11-10-2018 IPR035647 EF-G domain III/V-like syc1040_d 5ce883cd1c075788d297e04bdfff7ed2 637 Gene3D G3DSA:3.30.70.2570 518 592 2.8E-33 T 11-10-2018 IPR038363 LepA, C-terminal domain superfamily syc1040_d 5ce883cd1c075788d297e04bdfff7ed2 637 Hamap MF_03138 Translation factor GUF1 homolog, organellar chromatophore [lepA]. 34 635 68.447 T 11-10-2018 IPR027518 Translation factor GUF1 homologue, organellar chromatophore syc1040_d 5ce883cd1c075788d297e04bdfff7ed2 637 Hamap MF_00071 Elongation factor 4 [lepA]. 35 636 301.521 T 11-10-2018 IPR006297 Elongation factor 4 GO:0005525 syc2191_d a3fd1c68c967ceb9ce50aa5751d3c28b 441 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 37 437 1.9E-71 T 11-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 syc2191_d a3fd1c68c967ceb9ce50aa5751d3c28b 441 Gene3D G3DSA:2.40.30.170 323 417 2.9E-13 T 11-10-2018 syc2191_d a3fd1c68c967ceb9ce50aa5751d3c28b 441 Gene3D G3DSA:2.40.50.100 74 108 1.8E-8 T 11-10-2018 syc2191_d a3fd1c68c967ceb9ce50aa5751d3c28b 441 Gene3D G3DSA:1.10.287.470 249 283 2.9E-13 T 11-10-2018 syc2191_d a3fd1c68c967ceb9ce50aa5751d3c28b 441 Pfam PF13533 Biotin-lipoyl like 78 113 2.2E-8 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain syc2191_d a3fd1c68c967ceb9ce50aa5751d3c28b 441 Gene3D G3DSA:2.40.30.170 63 73 1.8E-8 T 11-10-2018 syc2191_d a3fd1c68c967ceb9ce50aa5751d3c28b 441 Gene3D G3DSA:2.40.50.100 284 322 2.9E-13 T 11-10-2018 syc2191_d a3fd1c68c967ceb9ce50aa5751d3c28b 441 Pfam PF13437 HlyD family secretion protein 292 408 3.4E-19 T 11-10-2018 syc2191_d a3fd1c68c967ceb9ce50aa5751d3c28b 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 405 420 4.1E-29 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 syc2191_d a3fd1c68c967ceb9ce50aa5751d3c28b 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 45 68 4.1E-29 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 syc2191_d a3fd1c68c967ceb9ce50aa5751d3c28b 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 87 107 4.1E-29 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 syc2191_d a3fd1c68c967ceb9ce50aa5751d3c28b 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 360 383 4.1E-29 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 syc2191_d a3fd1c68c967ceb9ce50aa5751d3c28b 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 336 360 4.1E-29 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 syc2191_d a3fd1c68c967ceb9ce50aa5751d3c28b 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 304 325 4.1E-29 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 syc2191_d a3fd1c68c967ceb9ce50aa5751d3c28b 441 Gene3D G3DSA:1.10.287.470 109 190 1.8E-8 T 11-10-2018 syc0569_d 41f74cc47b9b5f67e259c4fb01fc4cc0 296 PIRSF PIRSF004486 7 293 1.4E-101 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 syc0569_d 41f74cc47b9b5f67e259c4fb01fc4cc0 296 SUPERFAMILY SSF81799 115 213 1.24E-36 T 11-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 syc0569_d 41f74cc47b9b5f67e259c4fb01fc4cc0 296 Gene3D G3DSA:1.10.150.170 114 216 4.8E-104 T 11-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 syc0569_d 41f74cc47b9b5f67e259c4fb01fc4cc0 296 Pfam PF01795 MraW methylase family 11 291 1.3E-106 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 syc0569_d 41f74cc47b9b5f67e259c4fb01fc4cc0 296 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 10 291 2.5E-100 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 syc0569_d 41f74cc47b9b5f67e259c4fb01fc4cc0 296 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 13 292 37.635 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 syc0569_d 41f74cc47b9b5f67e259c4fb01fc4cc0 296 SUPERFAMILY SSF53335 12 292 3.67E-49 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase syc0569_d 41f74cc47b9b5f67e259c4fb01fc4cc0 296 Gene3D G3DSA:3.40.50.150 13 288 4.8E-104 T 11-10-2018 syc0957_c f7349a8b9516acdc34b1166f4d8d585b 220 SMART SM00240 108 169 9.5E-11 T 11-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 syc0957_c f7349a8b9516acdc34b1166f4d8d585b 220 Pfam PF00498 FHA domain 109 183 9.7E-13 T 11-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 syc0957_c f7349a8b9516acdc34b1166f4d8d585b 220 SUPERFAMILY SSF49879 74 193 3.63E-21 T 11-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 syc0957_c f7349a8b9516acdc34b1166f4d8d585b 220 Gene3D G3DSA:2.60.200.20 81 197 4.4E-25 T 11-10-2018 syc0667_d d2bdf8a5ffdf8c7e75588db06887f4f3 362 Pfam PF13271 Domain of unknown function (DUF4062) 6 87 1.4E-27 T 11-10-2018 IPR025139 Domain of unknown function DUF4062 syc1392_c e6f528d973124734c4b0f11bca218b02 484 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 329 341 - T 11-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal syc1392_c e6f528d973124734c4b0f11bca218b02 484 Pfam PF00875 DNA photolyase 6 165 6.2E-51 T 11-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 syc1392_c e6f528d973124734c4b0f11bca218b02 484 PRINTS PR00147 DNA photolyase signature 329 345 1.0E-31 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 syc1392_c e6f528d973124734c4b0f11bca218b02 484 PRINTS PR00147 DNA photolyase signature 141 157 1.0E-31 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 syc1392_c e6f528d973124734c4b0f11bca218b02 484 PRINTS PR00147 DNA photolyase signature 349 367 1.0E-31 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 syc1392_c e6f528d973124734c4b0f11bca218b02 484 PRINTS PR00147 DNA photolyase signature 388 402 1.0E-31 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 syc1392_c e6f528d973124734c4b0f11bca218b02 484 TIGRFAM TIGR03556 photolyase_8HDF: deoxyribodipyrimidine photo-lyase, 8-HDF type 4 470 4.6E-268 T 11-10-2018 IPR019947 DNA photolyase class 1, 8-HDF type syc1392_c e6f528d973124734c4b0f11bca218b02 484 Pfam PF03441 FAD binding domain of DNA photolyase 280 469 1.1E-72 T 11-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 syc1392_c e6f528d973124734c4b0f11bca218b02 484 Gene3D G3DSA:3.40.50.620 2 129 3.5E-46 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold syc1392_c e6f528d973124734c4b0f11bca218b02 484 SUPERFAMILY SSF52425 4 203 6.15E-59 T 11-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 syc1392_c e6f528d973124734c4b0f11bca218b02 484 SUPERFAMILY SSF48173 193 472 1.83E-102 T 11-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 syc1392_c e6f528d973124734c4b0f11bca218b02 484 Gene3D G3DSA:1.10.579.10 298 473 1.2E-76 T 11-10-2018 syc1722_c cb6ef2b98f0377b5e9f2c4c0b5cc79a5 383 SMART SM00670 184 291 8.6E-8 T 11-10-2018 IPR002716 PIN domain syc1722_c cb6ef2b98f0377b5e9f2c4c0b5cc79a5 383 SUPERFAMILY SSF88723 186 312 1.04E-22 T 11-10-2018 IPR029060 PIN-like domain superfamily syc1722_c cb6ef2b98f0377b5e9f2c4c0b5cc79a5 383 Gene3D G3DSA:3.40.50.1010 182 314 4.0E-46 T 11-10-2018 syc0012_c 595b0219b7171540fd518cf286b5180b 197 Pfam PF00574 Clp protease 11 190 1.5E-86 T 11-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA syc0012_c 595b0219b7171540fd518cf286b5180b 197 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 88 99 - T 11-10-2018 IPR018215 ClpP, Ser active site syc0012_c 595b0219b7171540fd518cf286b5180b 197 PRINTS PR00127 Clp protease catalytic subunit P signature 17 32 1.2E-53 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 syc0012_c 595b0219b7171540fd518cf286b5180b 197 PRINTS PR00127 Clp protease catalytic subunit P signature 166 185 1.2E-53 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 syc0012_c 595b0219b7171540fd518cf286b5180b 197 PRINTS PR00127 Clp protease catalytic subunit P signature 109 128 1.2E-53 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 syc0012_c 595b0219b7171540fd518cf286b5180b 197 PRINTS PR00127 Clp protease catalytic subunit P signature 88 105 1.2E-53 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 syc0012_c 595b0219b7171540fd518cf286b5180b 197 PRINTS PR00127 Clp protease catalytic subunit P signature 57 77 1.2E-53 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 syc0012_c 595b0219b7171540fd518cf286b5180b 197 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 110 123 - T 11-10-2018 IPR033135 ClpP, histidine active site syc0012_c 595b0219b7171540fd518cf286b5180b 197 SUPERFAMILY SSF52096 10 191 8.76E-72 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily syc0012_c 595b0219b7171540fd518cf286b5180b 197 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 1 190 1.5E-102 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 syc0012_c 595b0219b7171540fd518cf286b5180b 197 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 1 191 43.618 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 syc0012_c 595b0219b7171540fd518cf286b5180b 197 Gene3D G3DSA:3.90.226.10 1 197 1.0E-80 T 11-10-2018 syc1378_d b4566c3824b7df6a80c79f5f941eeea1 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 7.3E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR syc1378_d b4566c3824b7df6a80c79f5f941eeea1 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 7.3E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR syc1378_d b4566c3824b7df6a80c79f5f941eeea1 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 7.3E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR syc1378_d b4566c3824b7df6a80c79f5f941eeea1 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 7.3E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR syc1378_d b4566c3824b7df6a80c79f5f941eeea1 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 7.3E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR syc1378_d b4566c3824b7df6a80c79f5f941eeea1 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 7.3E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR syc1378_d b4566c3824b7df6a80c79f5f941eeea1 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 254 5.0E-78 T 11-10-2018 syc1378_d b4566c3824b7df6a80c79f5f941eeea1 258 PIRSF PIRSF000094 1 258 1.4E-109 T 11-10-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 syc1378_d b4566c3824b7df6a80c79f5f941eeea1 258 Gene3D G3DSA:3.40.50.720 7 202 7.2E-39 T 11-10-2018 syc1378_d b4566c3824b7df6a80c79f5f941eeea1 258 SUPERFAMILY SSF51735 6 257 2.68E-66 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily syc1378_d b4566c3824b7df6a80c79f5f941eeea1 258 Gene3D G3DSA:1.10.8.400 205 258 9.8E-23 T 11-10-2018 syc1246_c fabcd0297b274d7bfa648b3db3588f10 242 SUPERFAMILY SSF53335 12 241 2.84E-40 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase syc1246_c fabcd0297b274d7bfa648b3db3588f10 242 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 17 218 24.304 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 syc1246_c fabcd0297b274d7bfa648b3db3588f10 242 PIRSF PIRSF003078 6 224 2.3E-42 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 syc1246_c fabcd0297b274d7bfa648b3db3588f10 242 Pfam PF02527 rRNA small subunit methyltransferase G 24 204 2.9E-48 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 syc1246_c fabcd0297b274d7bfa648b3db3588f10 242 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 29 220 1.3E-45 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 syc1246_c fabcd0297b274d7bfa648b3db3588f10 242 Gene3D G3DSA:3.40.50.150 5 242 2.6E-70 T 11-10-2018 syc2067_c 6366990a31a333beb2e207e9774feb0f 353 Gene3D G3DSA:3.40.50.2000 99 348 3.5E-52 T 11-10-2018 syc2067_c 6366990a31a333beb2e207e9774feb0f 353 SUPERFAMILY SSF53756 14 352 4.4E-70 T 11-10-2018 syc2067_c 6366990a31a333beb2e207e9774feb0f 353 Gene3D G3DSA:3.40.50.2000 166 333 3.5E-52 T 11-10-2018 syc2067_c 6366990a31a333beb2e207e9774feb0f 353 Pfam PF13439 Glycosyltransferase Family 4 17 168 5.1E-10 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 syc2067_c 6366990a31a333beb2e207e9774feb0f 353 Pfam PF00534 Glycosyl transferases group 1 176 329 1.5E-32 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 syc0521_c 920bacdba88c8911a21e88c2ffc7a693 135 SUPERFAMILY SSF48452 28 119 4.1E-15 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc0521_c 920bacdba88c8911a21e88c2ffc7a693 135 SMART SM00028 74 107 5.7E-7 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc0521_c 920bacdba88c8911a21e88c2ffc7a693 135 Pfam PF00515 Tetratricopeptide repeat 74 105 2.5E-9 T 11-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 syc0521_c 920bacdba88c8911a21e88c2ffc7a693 135 Gene3D G3DSA:1.25.40.10 43 128 3.1E-14 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc2304_c db61bf8d15483634a1fefdab56ead239 326 SUPERFAMILY SSF49493 222 306 7.46E-20 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 syc2304_c db61bf8d15483634a1fefdab56ead239 326 Gene3D G3DSA:2.60.260.20 150 216 1.8E-18 T 11-10-2018 syc2304_c db61bf8d15483634a1fefdab56ead239 326 Gene3D G3DSA:2.60.260.20 218 323 4.6E-29 T 11-10-2018 syc2304_c db61bf8d15483634a1fefdab56ead239 326 Gene3D G3DSA:1.10.287.110 5 124 1.0E-33 T 11-10-2018 IPR036869 Chaperone J-domain superfamily syc2304_c db61bf8d15483634a1fefdab56ead239 326 PRINTS PR00625 DnaJ domain signature 65 84 1.3E-26 T 11-10-2018 IPR001623 DnaJ domain syc2304_c db61bf8d15483634a1fefdab56ead239 326 PRINTS PR00625 DnaJ domain signature 28 43 1.3E-26 T 11-10-2018 IPR001623 DnaJ domain syc2304_c db61bf8d15483634a1fefdab56ead239 326 PRINTS PR00625 DnaJ domain signature 45 65 1.3E-26 T 11-10-2018 IPR001623 DnaJ domain syc2304_c db61bf8d15483634a1fefdab56ead239 326 PRINTS PR00625 DnaJ domain signature 10 28 1.3E-26 T 11-10-2018 IPR001623 DnaJ domain syc2304_c db61bf8d15483634a1fefdab56ead239 326 Pfam PF01556 DnaJ C terminal domain 154 295 7.6E-37 T 11-10-2018 IPR002939 Chaperone DnaJ, C-terminal syc2304_c db61bf8d15483634a1fefdab56ead239 326 SUPERFAMILY SSF49493 152 230 1.83E-17 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 syc2304_c db61bf8d15483634a1fefdab56ead239 326 ProSitePatterns PS00636 Nt-dnaJ domain signature. 50 69 - T 11-10-2018 IPR018253 DnaJ domain, conserved site syc2304_c db61bf8d15483634a1fefdab56ead239 326 SMART SM00271 7 65 2.6E-31 T 11-10-2018 IPR001623 DnaJ domain syc2304_c db61bf8d15483634a1fefdab56ead239 326 SUPERFAMILY SSF46565 4 104 4.06E-34 T 11-10-2018 IPR036869 Chaperone J-domain superfamily syc2304_c db61bf8d15483634a1fefdab56ead239 326 Pfam PF00226 DnaJ domain 8 70 2.4E-27 T 11-10-2018 IPR001623 DnaJ domain syc1949_d 5b264145e404725d91efa000675887f1 148 Gene3D G3DSA:3.30.780.10 69 148 1.8E-28 T 11-10-2018 syc1949_d 5b264145e404725d91efa000675887f1 148 PIRSF PIRSF037511 32 148 4.5E-44 T 11-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 syc1949_d 5b264145e404725d91efa000675887f1 148 SUPERFAMILY SSF55159 40 143 6.41E-23 T 11-10-2018 IPR036877 SUI1 domain superfamily GO:0003743|GO:0006413 syc1949_d 5b264145e404725d91efa000675887f1 148 Pfam PF01253 Translation initiation factor SUI1 71 139 7.4E-17 T 11-10-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 syc0638_d 623fff2dc899ccfcc18568ffb1814e86 319 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 138 156 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site syc0638_d 623fff2dc899ccfcc18568ffb1814e86 319 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 129 140 0.39 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 syc0638_d 623fff2dc899ccfcc18568ffb1814e86 319 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 142 158 0.0066 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 syc0638_d 623fff2dc899ccfcc18568ffb1814e86 319 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 80 97 0.53 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 syc0638_d 623fff2dc899ccfcc18568ffb1814e86 319 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 187 203 0.0048 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 syc0638_d 623fff2dc899ccfcc18568ffb1814e86 319 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 98 109 0.69 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 syc0638_d 623fff2dc899ccfcc18568ffb1814e86 319 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 214 230 0.44 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 syc0638_d 623fff2dc899ccfcc18568ffb1814e86 319 Gene3D G3DSA:2.150.10.10 113 183 7.5E-9 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal syc0638_d 623fff2dc899ccfcc18568ffb1814e86 319 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 129 147 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site syc0638_d 623fff2dc899ccfcc18568ffb1814e86 319 SUPERFAMILY SSF51120 127 291 2.94E-26 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal syc0638_d 623fff2dc899ccfcc18568ffb1814e86 319 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 192 210 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site syc0638_d 623fff2dc899ccfcc18568ffb1814e86 319 PRINTS PR00313 NodO calcium binding signature 151 159 7.6E-11 T 11-10-2018 syc0638_d 623fff2dc899ccfcc18568ffb1814e86 319 PRINTS PR00313 NodO calcium binding signature 187 195 7.6E-11 T 11-10-2018 syc0638_d 623fff2dc899ccfcc18568ffb1814e86 319 PRINTS PR00313 NodO calcium binding signature 223 232 7.6E-11 T 11-10-2018 syc0638_d 623fff2dc899ccfcc18568ffb1814e86 319 PRINTS PR00313 NodO calcium binding signature 96 107 7.6E-11 T 11-10-2018 syc0638_d 623fff2dc899ccfcc18568ffb1814e86 319 Gene3D G3DSA:2.150.10.10 44 112 2.1E-8 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal syc0638_d 623fff2dc899ccfcc18568ffb1814e86 319 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 210 228 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site syc0638_d 623fff2dc899ccfcc18568ffb1814e86 319 Gene3D G3DSA:2.150.10.10 184 313 2.1E-19 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal syc0580_d 05afe3cdcdc9849eddd87777a51a40a1 405 Pfam PF01029 NusB family 1 85 8.3E-20 T 11-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 syc0580_d 05afe3cdcdc9849eddd87777a51a40a1 405 Pfam PF01189 16S rRNA methyltransferase RsmB/F 207 399 1.3E-67 T 11-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 syc0580_d 05afe3cdcdc9849eddd87777a51a40a1 405 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 331 347 2.6E-30 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase syc0580_d 05afe3cdcdc9849eddd87777a51a40a1 405 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 383 400 2.6E-30 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase syc0580_d 05afe3cdcdc9849eddd87777a51a40a1 405 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 217 227 2.6E-30 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase syc0580_d 05afe3cdcdc9849eddd87777a51a40a1 405 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 281 293 2.6E-30 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase syc0580_d 05afe3cdcdc9849eddd87777a51a40a1 405 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 188 202 2.6E-30 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase syc0580_d 05afe3cdcdc9849eddd87777a51a40a1 405 SUPERFAMILY SSF53335 98 400 1.37E-82 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase syc0580_d 05afe3cdcdc9849eddd87777a51a40a1 405 Gene3D G3DSA:3.40.50.150 104 400 2.2E-91 T 11-10-2018 syc0580_d 05afe3cdcdc9849eddd87777a51a40a1 405 Gene3D G3DSA:1.10.940.10 1 94 3.9E-29 T 11-10-2018 IPR035926 NusB-like superfamily syc0580_d 05afe3cdcdc9849eddd87777a51a40a1 405 SUPERFAMILY SSF48013 1 113 3.01E-25 T 11-10-2018 IPR035926 NusB-like superfamily syc0580_d 05afe3cdcdc9849eddd87777a51a40a1 405 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 1 400 4.7E-135 T 11-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 syc0327_d 782b20bf4e76bf9f822fb9a89ec66cc1 392 Pfam PF02687 FtsX-like permease family 302 382 1.6E-8 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 syc0327_d 782b20bf4e76bf9f822fb9a89ec66cc1 392 Pfam PF12704 MacB-like periplasmic core domain 28 241 3.9E-7 T 11-10-2018 IPR025857 MacB-like periplasmic core domain syc0327_d 782b20bf4e76bf9f822fb9a89ec66cc1 392 TIGRFAM TIGR01185 devC: ABC exporter transmembrane subunit, DevC protein 13 392 5.7E-170 T 11-10-2018 IPR005891 DevC protein syc0327_d 782b20bf4e76bf9f822fb9a89ec66cc1 392 PIRSF PIRSF031773 1 392 6.5E-178 T 11-10-2018 IPR005891 DevC protein syc0029_d 324435cb3e0f4e9d670515cb6c3aec2f 528 SUPERFAMILY SSF51905 5 528 2.81E-60 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc0029_d 324435cb3e0f4e9d670515cb6c3aec2f 528 Gene3D G3DSA:3.50.50.60 437 527 2.2E-15 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc0029_d 324435cb3e0f4e9d670515cb6c3aec2f 528 Pfam PF00732 GMC oxidoreductase 8 289 1.8E-15 T 11-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 syc0029_d 324435cb3e0f4e9d670515cb6c3aec2f 528 Gene3D G3DSA:3.50.50.60 1 147 8.7E-16 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc0029_d 324435cb3e0f4e9d670515cb6c3aec2f 528 Pfam PF05199 GMC oxidoreductase 461 518 1.0E-19 T 11-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 syc0029_d 324435cb3e0f4e9d670515cb6c3aec2f 528 Gene3D G3DSA:3.50.50.60 204 351 3.8E-8 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc1969_d 9f586abe5565605597b89ee166b6fae8 348 Pfam PF02885 Glycosyl transferase family, helical bundle domain 14 73 6.4E-10 T 11-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 syc1969_d 9f586abe5565605597b89ee166b6fae8 348 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 13 345 36.614 T 11-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 syc1969_d 9f586abe5565605597b89ee166b6fae8 348 SUPERFAMILY SSF52418 84 346 1.83E-91 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 syc1969_d 9f586abe5565605597b89ee166b6fae8 348 Gene3D G3DSA:3.40.1030.10 80 348 1.8E-102 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 syc1969_d 9f586abe5565605597b89ee166b6fae8 348 SUPERFAMILY SSF47648 14 77 1.28E-12 T 11-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 syc1969_d 9f586abe5565605597b89ee166b6fae8 348 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 15 344 1.1E-117 T 11-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 syc1969_d 9f586abe5565605597b89ee166b6fae8 348 Pfam PF00591 Glycosyl transferase family, a/b domain 84 335 2.1E-86 T 11-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 syc1969_d 9f586abe5565605597b89ee166b6fae8 348 Gene3D G3DSA:1.20.970.10 10 75 1.2E-18 T 11-10-2018 syc0723_d 5e8a93487f1fd2393942119491e2ab61 690 SMART SM00267 248 420 5.0E-34 T 11-10-2018 IPR000160 GGDEF domain syc0723_d 5e8a93487f1fd2393942119491e2ab61 690 Gene3D G3DSA:3.30.70.270 251 422 2.8E-37 T 11-10-2018 syc0723_d 5e8a93487f1fd2393942119491e2ab61 690 Pfam PF00563 EAL domain 437 672 2.6E-73 T 11-10-2018 IPR001633 EAL domain syc0723_d 5e8a93487f1fd2393942119491e2ab61 690 SUPERFAMILY SSF55073 264 420 3.92E-33 T 11-10-2018 IPR029787 Nucleotide cyclase syc0723_d 5e8a93487f1fd2393942119491e2ab61 690 Gene3D G3DSA:3.30.450.20 131 250 5.0E-10 T 11-10-2018 syc0723_d 5e8a93487f1fd2393942119491e2ab61 690 SUPERFAMILY SSF55785 132 246 6.81E-11 T 11-10-2018 IPR035965 PAS domain superfamily syc0723_d 5e8a93487f1fd2393942119491e2ab61 690 Pfam PF13426 PAS domain 151 246 1.4E-7 T 11-10-2018 IPR000014 PAS domain syc0723_d 5e8a93487f1fd2393942119491e2ab61 690 Pfam PF00990 Diguanylate cyclase, GGDEF domain 261 414 4.6E-29 T 11-10-2018 IPR000160 GGDEF domain syc0723_d 5e8a93487f1fd2393942119491e2ab61 690 SMART SM00052 430 677 2.8E-100 T 11-10-2018 IPR001633 EAL domain syc0723_d 5e8a93487f1fd2393942119491e2ab61 690 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 257 416 5.8E-27 T 11-10-2018 IPR000160 GGDEF domain syc0723_d 5e8a93487f1fd2393942119491e2ab61 690 SUPERFAMILY SSF141868 437 685 2.09E-84 T 11-10-2018 IPR035919 EAL domain superfamily syc0723_d 5e8a93487f1fd2393942119491e2ab61 690 Gene3D G3DSA:3.20.20.450 432 687 5.5E-92 T 11-10-2018 IPR035919 EAL domain superfamily syc1206_d 1345f423119de2a797fec8f5d74c06ae 421 Gene3D G3DSA:1.20.1530.20 25 406 1.6E-68 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily syc1206_d 1345f423119de2a797fec8f5d74c06ae 421 Pfam PF00999 Sodium/hydrogen exchanger family 32 397 3.2E-62 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 syc0435_d 31469d85464713480ac800aa413b3250 287 Pfam PF01926 50S ribosome-binding GTPase 126 195 1.2E-13 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 syc0435_d 31469d85464713480ac800aa413b3250 287 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 6 282 1.5E-91 T 11-10-2018 IPR019991 GTP-binding protein, ribosome biogenesis syc0435_d 31469d85464713480ac800aa413b3250 287 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 126 146 1.6E-5 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 syc0435_d 31469d85464713480ac800aa413b3250 287 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 172 187 1.6E-5 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 syc0435_d 31469d85464713480ac800aa413b3250 287 SUPERFAMILY SSF52540 12 189 4.33E-38 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0435_d 31469d85464713480ac800aa413b3250 287 PIRSF PIRSF006230 2 287 1.8E-75 T 11-10-2018 IPR016478 GTPase, MTG1 syc0435_d 31469d85464713480ac800aa413b3250 287 Gene3D G3DSA:1.10.1580.10 183 275 1.6E-12 T 11-10-2018 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily syc0435_d 31469d85464713480ac800aa413b3250 287 Gene3D G3DSA:3.40.50.300 15 181 2.1E-41 T 11-10-2018 syc0396_d ea14efeba550deed492c936875cbee65 468 Pfam PF01926 50S ribosome-binding GTPase 105 199 5.4E-7 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 syc0396_d ea14efeba550deed492c936875cbee65 468 Gene3D G3DSA:3.40.50.300 74 311 1.5E-16 T 11-10-2018 syc0396_d ea14efeba550deed492c936875cbee65 468 Pfam PF05128 Domain of unknown function (DUF697) 304 451 1.4E-6 T 11-10-2018 IPR021147 Protein of unknown function DUF697 syc0396_d ea14efeba550deed492c936875cbee65 468 SUPERFAMILY SSF52540 96 257 2.45E-16 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc2294_c b21a19efea924640bad1a65da8201b47 357 Gene3D G3DSA:3.30.1330.10 24 172 1.3E-43 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily syc2294_c b21a19efea924640bad1a65da8201b47 357 Pfam PF00586 AIR synthase related protein, N-terminal domain 61 171 1.0E-15 T 11-10-2018 IPR016188 PurM-like, N-terminal domain syc2294_c b21a19efea924640bad1a65da8201b47 357 SUPERFAMILY SSF56042 180 353 3.29E-36 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily syc2294_c b21a19efea924640bad1a65da8201b47 357 Gene3D G3DSA:3.90.650.10 179 357 3.6E-42 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily syc2294_c b21a19efea924640bad1a65da8201b47 357 PIRSF PIRSF005644 25 357 5.6E-107 T 11-10-2018 IPR011854 Carbamoyl dehydratase HypE syc2294_c b21a19efea924640bad1a65da8201b47 357 Pfam PF02769 AIR synthase related protein, C-terminal domain 184 312 1.3E-15 T 11-10-2018 IPR010918 PurM-like, C-terminal domain syc2294_c b21a19efea924640bad1a65da8201b47 357 SUPERFAMILY SSF55326 28 177 1.41E-30 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily syc2294_c b21a19efea924640bad1a65da8201b47 357 TIGRFAM TIGR02124 hypE: hydrogenase expression/formation protein HypE 28 357 2.6E-120 T 11-10-2018 IPR011854 Carbamoyl dehydratase HypE syc1690_d f18a87370eb56c262761043f28ac5e86 255 SUPERFAMILY SSF52172 15 188 1.02E-44 T 11-10-2018 IPR011006 CheY-like superfamily syc1690_d f18a87370eb56c262761043f28ac5e86 255 SMART SM00862 165 243 3.5E-24 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 syc1690_d f18a87370eb56c262761043f28ac5e86 255 Gene3D G3DSA:3.40.50.2300 5 137 4.0E-41 T 11-10-2018 syc1690_d f18a87370eb56c262761043f28ac5e86 255 Pfam PF00072 Response regulator receiver domain 16 124 1.4E-30 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 syc1690_d f18a87370eb56c262761043f28ac5e86 255 Pfam PF00486 Transcriptional regulatory protein, C terminal 165 242 2.7E-26 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 syc1690_d f18a87370eb56c262761043f28ac5e86 255 Gene3D G3DSA:1.10.10.10 144 249 8.5E-34 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily syc1690_d f18a87370eb56c262761043f28ac5e86 255 SMART SM00448 14 124 7.6E-47 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 syc1616_d ec263cc46fe1707e0ec8500387b1381e 306 Pfam PF01715 IPP transferase 43 278 8.4E-71 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 syc1616_d ec263cc46fe1707e0ec8500387b1381e 306 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 9 295 27.493 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 syc1616_d ec263cc46fe1707e0ec8500387b1381e 306 SUPERFAMILY SSF52540 9 162 8.01E-21 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc1616_d ec263cc46fe1707e0ec8500387b1381e 306 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 9 285 2.5E-91 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 syc1616_d ec263cc46fe1707e0ec8500387b1381e 306 Gene3D G3DSA:3.40.50.300 13 283 5.1E-85 T 11-10-2018 syc1616_d ec263cc46fe1707e0ec8500387b1381e 306 Gene3D G3DSA:1.10.20.140 116 184 5.1E-85 T 11-10-2018 syc0439_c 1cab445752479a3a46d7dc1440ccc4c1 208 SMART SM00448 35 148 3.0E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 syc0439_c 1cab445752479a3a46d7dc1440ccc4c1 208 SUPERFAMILY SSF52172 36 160 4.13E-32 T 11-10-2018 IPR011006 CheY-like superfamily syc0439_c 1cab445752479a3a46d7dc1440ccc4c1 208 Pfam PF00072 Response regulator receiver domain 37 149 3.0E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 syc0439_c 1cab445752479a3a46d7dc1440ccc4c1 208 Gene3D G3DSA:3.40.50.12740 35 206 7.9E-33 T 11-10-2018 syc2201_d 492633c9912037d067f5b828e788cccf 359 Pfam PF02653 Branched-chain amino acid transport system / permease component 5 341 3.4E-51 T 11-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 syc1185_d da33257790d0815ae24bdfbfcf7fb26e 705 SUPERFAMILY SSF46458 17 237 1.57E-44 T 11-10-2018 IPR009050 Globin-like superfamily syc1185_d da33257790d0815ae24bdfbfcf7fb26e 705 Pfam PF00427 Phycobilisome Linker polypeptide 280 405 1.1E-44 T 11-10-2018 IPR001297 Phycobilisome linker domain GO:0015979|GO:0030089 syc1185_d da33257790d0815ae24bdfbfcf7fb26e 705 Pfam PF00427 Phycobilisome Linker polypeptide 541 664 1.3E-44 T 11-10-2018 IPR001297 Phycobilisome linker domain GO:0015979|GO:0030089 syc1185_d da33257790d0815ae24bdfbfcf7fb26e 705 Pfam PF00502 Phycobilisome protein 149 236 9.7E-15 T 11-10-2018 IPR012128 Phycobilisome, alpha/beta subunit GO:0015979|GO:0030089 syc1185_d da33257790d0815ae24bdfbfcf7fb26e 705 Pfam PF00502 Phycobilisome protein 24 76 1.1E-9 T 11-10-2018 IPR012128 Phycobilisome, alpha/beta subunit GO:0015979|GO:0030089 syc1185_d da33257790d0815ae24bdfbfcf7fb26e 705 Gene3D G3DSA:1.10.3130.20 273 417 9.5E-50 T 11-10-2018 IPR038255 Phycobilisome linker domain superfamily syc1185_d da33257790d0815ae24bdfbfcf7fb26e 705 Gene3D G3DSA:1.10.3130.20 536 670 1.0E-45 T 11-10-2018 IPR038255 Phycobilisome linker domain superfamily syc1185_d da33257790d0815ae24bdfbfcf7fb26e 705 ProDom PD000852 PHYCOBILISOME LINKER POLYPEPTIDE PHOTOSYNTHESIS ELECTRON REPEAT ANCHOR ROD-CORE CHLOROPLAST ROD 546 664 5.0E-64 T 11-10-2018 IPR001297 Phycobilisome linker domain GO:0015979|GO:0030089 syc1185_d da33257790d0815ae24bdfbfcf7fb26e 705 ProDom PD000852 PHYCOBILISOME LINKER POLYPEPTIDE PHOTOSYNTHESIS ELECTRON REPEAT ANCHOR ROD-CORE CHLOROPLAST ROD 280 411 3.0E-71 T 11-10-2018 IPR001297 Phycobilisome linker domain GO:0015979|GO:0030089 syc2239_c 361cd09533f87005fac56fece0fbb620 456 Gene3D G3DSA:3.40.50.880 248 455 4.4E-6 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like syc2239_c 361cd09533f87005fac56fece0fbb620 456 Gene3D G3DSA:3.40.50.300 41 186 2.8E-21 T 11-10-2018 syc2239_c 361cd09533f87005fac56fece0fbb620 456 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 248 438 7.3E-39 T 11-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 syc2239_c 361cd09533f87005fac56fece0fbb620 456 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 3 188 2.4E-19 T 11-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain syc2239_c 361cd09533f87005fac56fece0fbb620 456 SUPERFAMILY SSF52540 1 193 3.48E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc2239_c 361cd09533f87005fac56fece0fbb620 456 SUPERFAMILY SSF52317 245 448 4.15E-31 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like syc2239_c 361cd09533f87005fac56fece0fbb620 456 Hamap MF_00027 Hydrogenobyrinate a,c-diamide synthase [cobB]. 1 438 40.317 T 11-10-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 syc2239_c 361cd09533f87005fac56fece0fbb620 456 TIGRFAM TIGR00379 cobB: cobyrinic acid a,c-diamide synthase 3 447 3.8E-145 T 11-10-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 syc0504_d cd3fa4d641f5b14db93df1925320c02b 240 Pfam PF02511 Thymidylate synthase complementing protein 8 222 5.2E-43 T 11-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 syc0504_d cd3fa4d641f5b14db93df1925320c02b 240 SUPERFAMILY SSF69796 4 236 1.96E-51 T 11-10-2018 IPR036098 Thymidylate synthase ThyX superfamily GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 syc0504_d cd3fa4d641f5b14db93df1925320c02b 240 TIGRFAM TIGR02170 thyX: thymidylate synthase, flavin-dependent 6 228 4.2E-57 T 11-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 syc0504_d cd3fa4d641f5b14db93df1925320c02b 240 Gene3D G3DSA:3.30.1360.170 6 231 1.6E-41 T 11-10-2018 syc0280_d e2117b0901a6b0632e4e241dde479535 175 Gene3D G3DSA:3.30.530.20 3 146 2.0E-11 T 11-10-2018 IPR023393 START-like domain superfamily syc0280_d e2117b0901a6b0632e4e241dde479535 175 SUPERFAMILY SSF55961 6 143 6.79E-16 T 11-10-2018 syc0280_d e2117b0901a6b0632e4e241dde479535 175 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 5 144 2.1E-17 T 11-10-2018 IPR019587 Polyketide cyclase/dehydrase syc0780_c ae7cad46aa67455f9e322416164a9c16 70 Pfam PF05489 Phage Tail Protein X 6 57 2.3E-20 T 11-10-2018 IPR008861 Phage Tail Protein X-like syc0780_c ae7cad46aa67455f9e322416164a9c16 70 Gene3D G3DSA:3.10.350.10 3 70 1.2E-23 T 11-10-2018 IPR036779 LysM domain superfamily syc1913_d 341a3710335bc01b312d8614e2f7a662 261 Gene3D G3DSA:3.30.420.10 3 153 1.2E-53 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 syc1913_d 341a3710335bc01b312d8614e2f7a662 261 Hamap MF_00042 Ribonuclease H [rnhA]. 5 156 30.347 T 11-10-2018 IPR022892 Ribonuclease HI GO:0004523 syc1913_d 341a3710335bc01b312d8614e2f7a662 261 SUPERFAMILY SSF53098 8 149 5.44E-48 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily syc1913_d 341a3710335bc01b312d8614e2f7a662 261 Pfam PF00075 RNase H 9 146 9.8E-42 T 11-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 syc1169_d 2fa1468160256de081c185262772871b 347 SUPERFAMILY SSF51261 165 304 1.99E-53 T 11-10-2018 IPR011055 Duplicated hybrid motif syc1169_d 2fa1468160256de081c185262772871b 347 Pfam PF01551 Peptidase family M23 206 294 2.2E-30 T 11-10-2018 IPR016047 Peptidase M23 syc1169_d 2fa1468160256de081c185262772871b 347 Gene3D G3DSA:2.70.70.10 156 304 5.5E-45 T 11-10-2018 IPR011055 Duplicated hybrid motif syc0993_d da254db0ca92c7fcff657772eebca949 250 Pfam PF01501 Glycosyl transferase family 8 56 226 1.4E-19 T 11-10-2018 IPR002495 Glycosyl transferase, family 8 GO:0016757 syc0993_d da254db0ca92c7fcff657772eebca949 250 Gene3D G3DSA:3.90.550.10 10 241 9.3E-22 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases syc0993_d da254db0ca92c7fcff657772eebca949 250 SUPERFAMILY SSF53448 6 241 5.06E-33 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases syc2510_d dfd8ff17c71a156489aa2765e76ccc2a 368 SUPERFAMILY SSF52540 4 206 1.32E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc2510_d dfd8ff17c71a156489aa2765e76ccc2a 368 SUPERFAMILY SSF54980 302 366 6.47E-7 T 11-10-2018 IPR035647 EF-G domain III/V-like syc2510_d dfd8ff17c71a156489aa2765e76ccc2a 368 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 134 3.9E-23 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 syc2510_d dfd8ff17c71a156489aa2765e76ccc2a 368 Gene3D G3DSA:3.30.70.870 300 368 5.2E-27 T 11-10-2018 syc2510_d dfd8ff17c71a156489aa2765e76ccc2a 368 PRINTS PR00315 GTP-binding elongation factor signature 7 20 5.9E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 syc2510_d dfd8ff17c71a156489aa2765e76ccc2a 368 PRINTS PR00315 GTP-binding elongation factor signature 71 81 5.9E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 syc2510_d dfd8ff17c71a156489aa2765e76ccc2a 368 PRINTS PR00315 GTP-binding elongation factor signature 51 59 5.9E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 syc2510_d dfd8ff17c71a156489aa2765e76ccc2a 368 PRINTS PR00315 GTP-binding elongation factor signature 123 132 5.9E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 syc2510_d dfd8ff17c71a156489aa2765e76ccc2a 368 PRINTS PR00315 GTP-binding elongation factor signature 87 98 5.9E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 syc2510_d dfd8ff17c71a156489aa2765e76ccc2a 368 Gene3D G3DSA:2.40.30.10 199 299 4.1E-32 T 11-10-2018 syc2510_d dfd8ff17c71a156489aa2765e76ccc2a 368 SUPERFAMILY SSF50447 180 301 1.81E-28 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily syc2510_d dfd8ff17c71a156489aa2765e76ccc2a 368 Pfam PF03144 Elongation factor Tu domain 2 219 289 5.0E-8 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 syc2510_d dfd8ff17c71a156489aa2765e76ccc2a 368 Pfam PF00009 Elongation factor Tu GTP binding domain 4 195 1.0E-55 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 syc2510_d dfd8ff17c71a156489aa2765e76ccc2a 368 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site syc2510_d dfd8ff17c71a156489aa2765e76ccc2a 368 Gene3D G3DSA:3.40.50.300 4 198 2.9E-64 T 11-10-2018 syc1138_d e444d18f159279f666f7477f7952fcde 490 Pfam PF00675 Insulinase (Peptidase family M16) 45 96 3.6E-8 T 11-10-2018 IPR011765 Peptidase M16, N-terminal syc1138_d e444d18f159279f666f7477f7952fcde 490 Pfam PF00675 Insulinase (Peptidase family M16) 140 237 1.1E-9 T 11-10-2018 IPR011765 Peptidase M16, N-terminal syc1138_d e444d18f159279f666f7477f7952fcde 490 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 62 85 - T 11-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 syc1138_d e444d18f159279f666f7477f7952fcde 490 Pfam PF05193 Peptidase M16 inactive domain 245 421 5.0E-34 T 11-10-2018 IPR007863 Peptidase M16, C-terminal syc1138_d e444d18f159279f666f7477f7952fcde 490 Gene3D G3DSA:3.30.830.10 130 296 1.0E-42 T 11-10-2018 syc1138_d e444d18f159279f666f7477f7952fcde 490 SUPERFAMILY SSF63411 17 295 6.55E-50 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 syc1138_d e444d18f159279f666f7477f7952fcde 490 Gene3D G3DSA:3.30.830.10 298 490 8.7E-47 T 11-10-2018 syc1138_d e444d18f159279f666f7477f7952fcde 490 SUPERFAMILY SSF63411 306 483 2.87E-34 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 syc1138_d e444d18f159279f666f7477f7952fcde 490 Gene3D G3DSA:3.30.830.10 26 127 7.5E-18 T 11-10-2018 syc2019_c f093feab8ce0c487a555f9ea5aadbd93 376 Gene3D G3DSA:2.60.260.20 118 254 1.5E-35 T 11-10-2018 syc2019_c f093feab8ce0c487a555f9ea5aadbd93 376 SUPERFAMILY SSF57938 135 215 9.29E-18 T 11-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily syc2019_c f093feab8ce0c487a555f9ea5aadbd93 376 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 1 373 38.745 T 11-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 syc2019_c f093feab8ce0c487a555f9ea5aadbd93 376 Pfam PF00226 DnaJ domain 4 65 8.7E-27 T 11-10-2018 IPR001623 DnaJ domain syc2019_c f093feab8ce0c487a555f9ea5aadbd93 376 Pfam PF01556 DnaJ C terminal domain 122 339 1.0E-37 T 11-10-2018 IPR002939 Chaperone DnaJ, C-terminal syc2019_c f093feab8ce0c487a555f9ea5aadbd93 376 SUPERFAMILY SSF49493 114 272 7.33E-19 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 syc2019_c f093feab8ce0c487a555f9ea5aadbd93 376 Gene3D G3DSA:2.60.260.20 259 363 1.4E-24 T 11-10-2018 syc2019_c f093feab8ce0c487a555f9ea5aadbd93 376 PRINTS PR00625 DnaJ domain signature 6 24 1.7E-28 T 11-10-2018 IPR001623 DnaJ domain syc2019_c f093feab8ce0c487a555f9ea5aadbd93 376 PRINTS PR00625 DnaJ domain signature 60 79 1.7E-28 T 11-10-2018 IPR001623 DnaJ domain syc2019_c f093feab8ce0c487a555f9ea5aadbd93 376 PRINTS PR00625 DnaJ domain signature 40 60 1.7E-28 T 11-10-2018 IPR001623 DnaJ domain syc2019_c f093feab8ce0c487a555f9ea5aadbd93 376 PRINTS PR00625 DnaJ domain signature 24 39 1.7E-28 T 11-10-2018 IPR001623 DnaJ domain syc2019_c f093feab8ce0c487a555f9ea5aadbd93 376 Gene3D G3DSA:1.10.287.110 1 111 6.9E-37 T 11-10-2018 IPR036869 Chaperone J-domain superfamily syc2019_c f093feab8ce0c487a555f9ea5aadbd93 376 SUPERFAMILY SSF49493 264 350 8.76E-21 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 syc2019_c f093feab8ce0c487a555f9ea5aadbd93 376 SMART SM00271 3 60 1.7E-29 T 11-10-2018 IPR001623 DnaJ domain syc2019_c f093feab8ce0c487a555f9ea5aadbd93 376 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 4 355 1.0E-130 T 11-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 syc2019_c f093feab8ce0c487a555f9ea5aadbd93 376 Pfam PF00684 DnaJ central domain 148 212 1.6E-12 T 11-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 syc2019_c f093feab8ce0c487a555f9ea5aadbd93 376 SUPERFAMILY SSF46565 4 103 1.44E-34 T 11-10-2018 IPR036869 Chaperone J-domain superfamily syc2019_c f093feab8ce0c487a555f9ea5aadbd93 376 Gene3D G3DSA:2.10.230.10 148 212 1.5E-35 T 11-10-2018 syc0591_c b7e9457039fe6e7a865ba36eb9d92b84 288 SUPERFAMILY SSF54675 5 116 3.92E-27 T 11-10-2018 syc0591_c b7e9457039fe6e7a865ba36eb9d92b84 288 Gene3D G3DSA:3.90.1170.20 22 285 6.2E-92 T 11-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 syc0591_c b7e9457039fe6e7a865ba36eb9d92b84 288 SUPERFAMILY SSF51690 117 287 8.63E-57 T 11-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 syc0591_c b7e9457039fe6e7a865ba36eb9d92b84 288 Gene3D G3DSA:3.20.20.70 131 277 6.2E-92 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 syc0591_c b7e9457039fe6e7a865ba36eb9d92b84 288 PIRSF PIRSF006250 12 288 2.0E-80 T 11-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 syc0591_c b7e9457039fe6e7a865ba36eb9d92b84 288 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 18 286 6.2E-95 T 11-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 syc0591_c b7e9457039fe6e7a865ba36eb9d92b84 288 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 117 286 2.8E-60 T 11-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 syc0591_c b7e9457039fe6e7a865ba36eb9d92b84 288 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 27 115 2.8E-19 T 11-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 syc1915_d 2f56a1274f51afbd6287b7da09f6984a 145 Pfam PF00578 AhpC/TSA family 5 124 4.3E-36 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 syc1915_d 2f56a1274f51afbd6287b7da09f6984a 145 Gene3D G3DSA:3.40.30.10 2 144 5.3E-45 T 11-10-2018 syc1915_d 2f56a1274f51afbd6287b7da09f6984a 145 PIRSF PIRSF000239 1 137 1.3E-25 T 11-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 syc1915_d 2f56a1274f51afbd6287b7da09f6984a 145 SUPERFAMILY SSF52833 1 143 2.21E-46 T 11-10-2018 IPR036249 Thioredoxin-like superfamily syc1773_d c4da0e5b9e8fb7af6180fe59f390e274 424 Pfam PF01966 HD domain 61 129 6.6E-10 T 11-10-2018 IPR006674 HD domain syc1773_d c4da0e5b9e8fb7af6180fe59f390e274 424 SMART SM00471 57 186 2.0E-10 T 11-10-2018 IPR003607 HD/PDEase domain syc1773_d c4da0e5b9e8fb7af6180fe59f390e274 424 Gene3D G3DSA:1.10.3210.10 7 399 1.7E-112 T 11-10-2018 syc1773_d c4da0e5b9e8fb7af6180fe59f390e274 424 SUPERFAMILY SSF109604 4 408 3.14E-100 T 11-10-2018 syc1773_d c4da0e5b9e8fb7af6180fe59f390e274 424 Gene3D G3DSA:1.20.1250.30 236 407 1.7E-112 T 11-10-2018 syc2401_c 87b12a3a1b2d532f8a02bd90efbaa1cf 320 Pfam PF00581 Rhodanese-like domain 189 308 1.1E-13 T 11-10-2018 IPR001763 Rhodanese-like domain syc2401_c 87b12a3a1b2d532f8a02bd90efbaa1cf 320 Pfam PF00581 Rhodanese-like domain 48 159 3.2E-18 T 11-10-2018 IPR001763 Rhodanese-like domain syc2401_c 87b12a3a1b2d532f8a02bd90efbaa1cf 320 Gene3D G3DSA:3.40.250.10 183 319 2.3E-32 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily syc2401_c 87b12a3a1b2d532f8a02bd90efbaa1cf 320 SUPERFAMILY SSF52821 42 178 2.75E-29 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily syc2401_c 87b12a3a1b2d532f8a02bd90efbaa1cf 320 SUPERFAMILY SSF52821 184 317 1.57E-27 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily syc2401_c 87b12a3a1b2d532f8a02bd90efbaa1cf 320 Gene3D G3DSA:3.40.250.10 33 181 1.1E-31 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily syc2401_c 87b12a3a1b2d532f8a02bd90efbaa1cf 320 ProSitePatterns PS00683 Rhodanese C-terminal signature. 296 306 - T 11-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 syc2401_c 87b12a3a1b2d532f8a02bd90efbaa1cf 320 SMART SM00450 184 312 6.1E-22 T 11-10-2018 IPR001763 Rhodanese-like domain syc2401_c 87b12a3a1b2d532f8a02bd90efbaa1cf 320 SMART SM00450 46 163 8.3E-20 T 11-10-2018 IPR001763 Rhodanese-like domain syc2401_c 87b12a3a1b2d532f8a02bd90efbaa1cf 320 ProSitePatterns PS00380 Rhodanese signature 1. 72 83 - T 11-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 syc0383_d bca1abf8e38176a4399045ab50fc2bb3 185 Hamap MF_01459 Chromophore lyase CpcS/CpeS [cpcS]. 4 184 19.135 T 11-10-2018 IPR018536 Chromophore lyase CpcS/CpeS GO:0017009 syc0383_d bca1abf8e38176a4399045ab50fc2bb3 185 Pfam PF09367 CpeS-like protein 8 183 1.3E-37 T 11-10-2018 IPR018536 Chromophore lyase CpcS/CpeS GO:0017009 syc0383_d bca1abf8e38176a4399045ab50fc2bb3 185 Gene3D G3DSA:2.40.128.20 4 168 9.1E-22 T 11-10-2018 IPR012674 Calycin syc1170_c 8fca851e39b7856801b64072be44152e 135 TIGRFAM TIGR03044 PS_II_psb27: photosystem II protein Psb27 8 134 2.3E-57 T 11-10-2018 IPR017488 Photosystem II Psb27, bacterial syc1170_c 8fca851e39b7856801b64072be44152e 135 Gene3D G3DSA:1.20.58.810 27 135 1.0E-44 T 11-10-2018 IPR038450 Photosystem II Pbs27 superfamily syc1170_c 8fca851e39b7856801b64072be44152e 135 Pfam PF13326 Photosystem II Pbs27 24 128 1.8E-22 T 11-10-2018 IPR025585 Photosystem II Pbs27 GO:0010207 syc1170_c 8fca851e39b7856801b64072be44152e 135 Hamap MF_01481 Photosystem II lipoprotein Psb27 [psb27]. 5 131 23.945 T 11-10-2018 IPR025585 Photosystem II Pbs27 GO:0010207 syc1200_c 270b62453d679369d136395a9bb29528 170 SUPERFAMILY SSF141571 39 141 5.89E-27 T 11-10-2018 syc1200_c 270b62453d679369d136395a9bb29528 170 Gene3D G3DSA:2.160.20.100 37 170 1.3E-35 T 11-10-2018 syc1200_c 270b62453d679369d136395a9bb29528 170 Pfam PF00805 Pentapeptide repeats (8 copies) 103 142 4.6E-7 T 11-10-2018 IPR001646 Pentapeptide repeat syc1200_c 270b62453d679369d136395a9bb29528 170 Pfam PF00805 Pentapeptide repeats (8 copies) 63 101 7.0E-11 T 11-10-2018 IPR001646 Pentapeptide repeat syc0705_c aed0391b17ff78f121cfe76120ba0a00 375 Gene3D G3DSA:3.40.50.300 48 209 1.2E-34 T 11-10-2018 syc0705_c aed0391b17ff78f121cfe76120ba0a00 375 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 281 354 3.1E-32 T 11-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 syc0705_c aed0391b17ff78f121cfe76120ba0a00 375 SUPERFAMILY SSF52540 46 279 5.12E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0705_c aed0391b17ff78f121cfe76120ba0a00 375 SUPERFAMILY SSF46785 285 358 1.81E-25 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily syc0705_c aed0391b17ff78f121cfe76120ba0a00 375 Gene3D G3DSA:1.10.10.10 285 363 8.1E-33 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily syc0705_c aed0391b17ff78f121cfe76120ba0a00 375 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 375 162.931 T 11-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 syc0705_c aed0391b17ff78f121cfe76120ba0a00 375 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 34 263 6.8E-108 T 11-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 syc0705_c aed0391b17ff78f121cfe76120ba0a00 375 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 278 354 6.0E-40 T 11-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 syc0705_c aed0391b17ff78f121cfe76120ba0a00 375 Gene3D G3DSA:1.10.8.60 210 283 3.4E-28 T 11-10-2018 syc0705_c aed0391b17ff78f121cfe76120ba0a00 375 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 52 354 7.9E-136 T 11-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 syc0705_c aed0391b17ff78f121cfe76120ba0a00 375 SMART SM00382 79 210 1.6E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain syc1496_c 1a6212344f02647e2085da51d5d2df52 390 SUPERFAMILY SSF55979 266 387 1.78E-31 T 11-10-2018 syc1496_c 1a6212344f02647e2085da51d5d2df52 390 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 16 388 2.7E-108 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 syc1496_c 1a6212344f02647e2085da51d5d2df52 390 SUPERFAMILY SSF55979 16 136 8.84E-21 T 11-10-2018 syc1496_c 1a6212344f02647e2085da51d5d2df52 390 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 266 387 7.2E-41 T 11-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 syc1496_c 1a6212344f02647e2085da51d5d2df52 390 PIRSF PIRSF000804 16 389 3.3E-126 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 syc1496_c 1a6212344f02647e2085da51d5d2df52 390 Gene3D G3DSA:3.70.10.10 154 386 3.0E-115 T 11-10-2018 syc1496_c 1a6212344f02647e2085da51d5d2df52 390 SUPERFAMILY SSF55979 144 264 1.37E-21 T 11-10-2018 syc1496_c 1a6212344f02647e2085da51d5d2df52 390 SMART SM00480 32 384 4.5E-159 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 syc1496_c 1a6212344f02647e2085da51d5d2df52 390 Pfam PF02767 DNA polymerase III beta subunit, central domain 145 263 8.8E-36 T 11-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 syc1496_c 1a6212344f02647e2085da51d5d2df52 390 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 16 136 4.9E-36 T 11-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 syc1496_c 1a6212344f02647e2085da51d5d2df52 390 Gene3D G3DSA:3.10.150.10 16 262 3.0E-115 T 11-10-2018 syc2306_d 88a30ab1bb6ab18c5fc0118bffc34295 160 SUPERFAMILY SSF82649 4 142 7.33E-46 T 11-10-2018 syc2306_d 88a30ab1bb6ab18c5fc0118bffc34295 160 Pfam PF01592 NifU-like N terminal domain 10 129 8.3E-25 T 11-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 syc2306_d 88a30ab1bb6ab18c5fc0118bffc34295 160 TIGRFAM TIGR01994 SUF_scaf_2: SUF system FeS assembly protein, NifU family 7 141 1.6E-50 T 11-10-2018 syc2306_d 88a30ab1bb6ab18c5fc0118bffc34295 160 Gene3D G3DSA:3.90.1010.10 2 145 5.7E-48 T 11-10-2018 syc0457_d f3c8dc8818218c104c9507008dcc43a5 219 Pfam PF13489 Methyltransferase domain 41 155 1.6E-11 T 11-10-2018 syc0457_d f3c8dc8818218c104c9507008dcc43a5 219 Gene3D G3DSA:3.40.50.150 16 216 1.2E-25 T 11-10-2018 syc0457_d f3c8dc8818218c104c9507008dcc43a5 219 SUPERFAMILY SSF53335 7 205 1.17E-26 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase syc1255_c 100736dbe2eb647c1355d68e0e1dfffb 146 SUPERFAMILY SSF54593 4 127 2.75E-19 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase syc1255_c 100736dbe2eb647c1355d68e0e1dfffb 146 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 122 7.4E-7 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain syc1255_c 100736dbe2eb647c1355d68e0e1dfffb 146 Gene3D G3DSA:3.10.180.10 2 132 9.8E-29 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase syc2087_c b9168e7a915cb385c3cebf0d62e66c09 168 Pfam PF01613 Flavin reductase like domain 20 155 3.0E-31 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 syc2087_c b9168e7a915cb385c3cebf0d62e66c09 168 SUPERFAMILY SSF50475 10 165 1.28E-43 T 11-10-2018 syc2087_c b9168e7a915cb385c3cebf0d62e66c09 168 Gene3D G3DSA:2.30.110.10 11 168 6.4E-39 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 syc2087_c b9168e7a915cb385c3cebf0d62e66c09 168 SMART SM00903 19 166 6.2E-41 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 syc0625_d 1e6bef279e749abaa525e2fe46a2838b 88 Gene3D G3DSA:3.30.70.260 4 82 5.5E-6 T 11-10-2018 syc0625_d 1e6bef279e749abaa525e2fe46a2838b 88 SMART SM00930 8 82 1.2E-13 T 11-10-2018 IPR018449 NIL domain syc0625_d 1e6bef279e749abaa525e2fe46a2838b 88 SUPERFAMILY SSF55021 7 80 8.81E-13 T 11-10-2018 syc0625_d 1e6bef279e749abaa525e2fe46a2838b 88 Pfam PF09383 NIL domain 11 79 2.3E-12 T 11-10-2018 IPR018449 NIL domain syc1382_d b5638edfe552dfbdc9622b619146f27a 408 TIGRFAM TIGR03492 TIGR03492: conserved hypothetical protein 4 404 1.1E-152 T 11-10-2018 IPR019994 Conserved hypothetical protein CHP03492 syc1382_d b5638edfe552dfbdc9622b619146f27a 408 SUPERFAMILY SSF53756 1 403 1.6E-7 T 11-10-2018 syc0083_c 33c25d48d11d8e693737968815b55368 407 Pfam PF12000 Gkycosyl transferase family 4 group 25 195 1.2E-64 T 11-10-2018 IPR022623 Domain of unknown function DUF3495 syc0083_c 33c25d48d11d8e693737968815b55368 407 Gene3D G3DSA:3.40.50.2000 191 385 1.6E-45 T 11-10-2018 syc0083_c 33c25d48d11d8e693737968815b55368 407 Pfam PF00534 Glycosyl transferases group 1 209 383 6.2E-20 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 syc0083_c 33c25d48d11d8e693737968815b55368 407 Gene3D G3DSA:3.40.50.2000 15 394 1.6E-45 T 11-10-2018 syc0083_c 33c25d48d11d8e693737968815b55368 407 SUPERFAMILY SSF53756 15 395 1.2E-54 T 11-10-2018 syc1919_d 94bcd2f2ec8c08f1ff76b4d774939d88 381 SUPERFAMILY SSF51905 1 370 1.42E-32 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc1919_d 94bcd2f2ec8c08f1ff76b4d774939d88 381 Gene3D G3DSA:3.50.50.60 4 358 2.3E-34 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc1919_d 94bcd2f2ec8c08f1ff76b4d774939d88 381 Pfam PF01266 FAD dependent oxidoreductase 2 358 8.7E-31 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 syc1919_d 94bcd2f2ec8c08f1ff76b4d774939d88 381 Gene3D G3DSA:3.30.9.10 82 320 2.3E-34 T 11-10-2018 syc1783_c 42a1f926b635ac818357cc6170849c07 72 Pfam PF01381 Helix-turn-helix 15 67 5.4E-11 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 syc1783_c 42a1f926b635ac818357cc6170849c07 72 SMART SM00530 14 70 9.7E-8 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 syc1783_c 42a1f926b635ac818357cc6170849c07 72 Gene3D G3DSA:1.10.260.40 3 70 8.3E-22 T 11-10-2018 syc1783_c 42a1f926b635ac818357cc6170849c07 72 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 5 64 1.3E-22 T 11-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 syc1783_c 42a1f926b635ac818357cc6170849c07 72 SUPERFAMILY SSF47413 10 68 1.04E-16 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 syc2462_d 33f374b9cd268e7d85d2fff0418b6fc7 104 Gene3D G3DSA:3.30.70.120 1 104 4.0E-30 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal syc2462_d 33f374b9cd268e7d85d2fff0418b6fc7 104 SUPERFAMILY SSF54913 4 102 1.53E-17 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta syc0036_d cba870501768f72bfe418212cbe31a00 183 Gene3D G3DSA:3.90.190.10 7 183 1.7E-39 T 11-10-2018 IPR029021 Protein-tyrosine phosphatase-like syc0036_d cba870501768f72bfe418212cbe31a00 183 SUPERFAMILY SSF52799 40 179 7.75E-29 T 11-10-2018 IPR029021 Protein-tyrosine phosphatase-like syc0036_d cba870501768f72bfe418212cbe31a00 183 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 128 138 - T 11-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 syc0036_d cba870501768f72bfe418212cbe31a00 183 SMART SM00404 88 182 4.5E-7 T 11-10-2018 IPR003595 Protein-tyrosine phosphatase, catalytic syc0036_d cba870501768f72bfe418212cbe31a00 183 Pfam PF05706 Cyclin-dependent kinase inhibitor 3 (CDKN3) 9 146 8.7E-12 T 11-10-2018 IPR022778 CDKN3 domain GO:0004721|GO:0004725 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 syc0477_d c78134d021e5f4241dd99e0e15d215d7 187 Gene3D G3DSA:3.40.50.300 20 185 5.7E-36 T 11-10-2018 syc0477_d c78134d021e5f4241dd99e0e15d215d7 187 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 30 183 6.4E-32 T 11-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 syc0477_d c78134d021e5f4241dd99e0e15d215d7 187 PIRSF PIRSF015617 14 187 1.7E-48 T 11-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 syc0477_d c78134d021e5f4241dd99e0e15d215d7 187 SUPERFAMILY SSF52540 30 182 2.17E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0285_d 2f6997559a5077393536010c06d204be 163 Hamap MF_01405 dITP/XTP pyrophosphatase. 2 163 36.928 T 11-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 syc0285_d 2f6997559a5077393536010c06d204be 163 Gene3D G3DSA:3.90.950.10 1 161 3.2E-55 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like syc0285_d 2f6997559a5077393536010c06d204be 163 Pfam PF01725 Ham1 family 4 154 2.1E-46 T 11-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 syc0285_d 2f6997559a5077393536010c06d204be 163 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 4 156 5.0E-48 T 11-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 syc0285_d 2f6997559a5077393536010c06d204be 163 SUPERFAMILY SSF52972 1 156 1.54E-49 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like syc2152_c 7f198da96e7ea53e04a6727744ed5d36 150 Gene3D G3DSA:3.40.30.10 3 150 5.4E-48 T 11-10-2018 syc2152_c 7f198da96e7ea53e04a6727744ed5d36 150 PIRSF PIRSF000239 1 150 3.1E-28 T 11-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 syc2152_c 7f198da96e7ea53e04a6727744ed5d36 150 SUPERFAMILY SSF52833 1 150 1.6E-52 T 11-10-2018 IPR036249 Thioredoxin-like superfamily syc2152_c 7f198da96e7ea53e04a6727744ed5d36 150 Pfam PF00578 AhpC/TSA family 5 128 1.4E-42 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 syc0015_c f80ed2899805b9770f17f57f530c5e9b 316 Pfam PF04545 Sigma-70, region 4 254 307 1.9E-20 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 syc0015_c f80ed2899805b9770f17f57f530c5e9b 316 SUPERFAMILY SSF88659 158 232 7.85E-16 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like syc0015_c f80ed2899805b9770f17f57f530c5e9b 316 Pfam PF04539 Sigma-70 region 3 164 240 5.0E-18 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 syc0015_c f80ed2899805b9770f17f57f530c5e9b 316 Gene3D G3DSA:1.10.10.10 158 234 5.6E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily syc0015_c f80ed2899805b9770f17f57f530c5e9b 316 Pfam PF04542 Sigma-70 region 2 85 154 7.6E-22 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 syc0015_c f80ed2899805b9770f17f57f530c5e9b 316 SUPERFAMILY SSF88659 219 311 1.08E-26 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like syc0015_c f80ed2899805b9770f17f57f530c5e9b 316 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 279 305 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 syc0015_c f80ed2899805b9770f17f57f530c5e9b 316 TIGRFAM TIGR02997 Sig70-cyanoRpoD: RNA polymerase sigma factor, cyanobacterial RpoD-like family 24 306 1.4E-120 T 11-10-2018 IPR017848 RNA polymerase sigma factor, RpoD-like, cyanobacteria syc0015_c f80ed2899805b9770f17f57f530c5e9b 316 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 81 307 6.6E-38 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 syc0015_c f80ed2899805b9770f17f57f530c5e9b 316 PRINTS PR00046 Major sigma-70 factor signature 279 294 6.6E-26 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 syc0015_c f80ed2899805b9770f17f57f530c5e9b 316 PRINTS PR00046 Major sigma-70 factor signature 109 122 6.6E-26 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 syc0015_c f80ed2899805b9770f17f57f530c5e9b 316 PRINTS PR00046 Major sigma-70 factor signature 258 270 6.6E-26 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 syc0015_c f80ed2899805b9770f17f57f530c5e9b 316 PRINTS PR00046 Major sigma-70 factor signature 294 305 6.6E-26 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 syc0015_c f80ed2899805b9770f17f57f530c5e9b 316 PRINTS PR00046 Major sigma-70 factor signature 133 141 6.6E-26 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 syc0015_c f80ed2899805b9770f17f57f530c5e9b 316 Gene3D G3DSA:1.10.10.10 236 314 6.6E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily syc0015_c f80ed2899805b9770f17f57f530c5e9b 316 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 109 122 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 syc0015_c f80ed2899805b9770f17f57f530c5e9b 316 SUPERFAMILY SSF88946 21 155 9.55E-50 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 syc0015_c f80ed2899805b9770f17f57f530c5e9b 316 Gene3D G3DSA:1.10.601.10 52 157 1.2E-47 T 11-10-2018 syc0015_c f80ed2899805b9770f17f57f530c5e9b 316 Pfam PF00140 Sigma-70 factor, region 1.2 24 54 3.7E-11 T 11-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 syc0901_c 3adba7eea45fbfdd9bd2a181ac030788 459 Gene3D G3DSA:3.50.50.60 7 309 2.3E-121 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc0901_c 3adba7eea45fbfdd9bd2a181ac030788 459 SUPERFAMILY SSF52833 356 455 3.43E-22 T 11-10-2018 IPR036249 Thioredoxin-like superfamily syc0901_c 3adba7eea45fbfdd9bd2a181ac030788 459 SUPERFAMILY SSF51905 6 310 6.74E-48 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc0901_c 3adba7eea45fbfdd9bd2a181ac030788 459 Gene3D G3DSA:3.40.30.10 358 457 6.9E-21 T 11-10-2018 syc0901_c 3adba7eea45fbfdd9bd2a181ac030788 459 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 6 310 2.3E-115 T 11-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 syc0901_c 3adba7eea45fbfdd9bd2a181ac030788 459 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 148 172 9.3E-76 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 syc0901_c 3adba7eea45fbfdd9bd2a181ac030788 459 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 43 58 9.3E-76 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 syc0901_c 3adba7eea45fbfdd9bd2a181ac030788 459 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 273 291 9.3E-76 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 syc0901_c 3adba7eea45fbfdd9bd2a181ac030788 459 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 109 117 9.3E-76 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 syc0901_c 3adba7eea45fbfdd9bd2a181ac030788 459 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 200 216 9.3E-76 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 syc0901_c 3adba7eea45fbfdd9bd2a181ac030788 459 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 9.3E-76 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 syc0901_c 3adba7eea45fbfdd9bd2a181ac030788 459 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 64 74 9.3E-76 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 syc0901_c 3adba7eea45fbfdd9bd2a181ac030788 459 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 131 143 9.3E-76 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 syc0901_c 3adba7eea45fbfdd9bd2a181ac030788 459 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 6 28 9.3E-76 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 syc0901_c 3adba7eea45fbfdd9bd2a181ac030788 459 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 299 2.4E-48 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 syc0901_c 3adba7eea45fbfdd9bd2a181ac030788 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.1E-35 T 11-10-2018 syc0901_c 3adba7eea45fbfdd9bd2a181ac030788 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 152 170 1.1E-35 T 11-10-2018 syc0901_c 3adba7eea45fbfdd9bd2a181ac030788 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 263 285 1.1E-35 T 11-10-2018 syc0901_c 3adba7eea45fbfdd9bd2a181ac030788 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 1.1E-35 T 11-10-2018 syc0901_c 3adba7eea45fbfdd9bd2a181ac030788 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 108 126 1.1E-35 T 11-10-2018 syc0901_c 3adba7eea45fbfdd9bd2a181ac030788 459 Gene3D G3DSA:3.50.50.60 125 249 2.3E-121 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc0901_c 3adba7eea45fbfdd9bd2a181ac030788 459 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 138 160 - T 11-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 syc0901_c 3adba7eea45fbfdd9bd2a181ac030788 459 Pfam PF00085 Thioredoxin 365 450 4.5E-17 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 syc0432_c 01ed69f9c82f1bcd68ddd760d053276f 220 Pfam PF12787 EcsC protein family 51 202 7.6E-7 T 11-10-2018 IPR024787 EcsC protein syc1990_d e4de5989098267533c4876ff943624e7 134 SUPERFAMILY SSF54909 31 85 1.37E-6 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel syc1990_d e4de5989098267533c4876ff943624e7 134 Pfam PF11695 Domain of unknown function (DUF3291) 29 107 1.3E-5 T 11-10-2018 IPR021708 Domain of unknown function DUF3291 syc2212_d a189be9a48e84e6e8b188930e7b7b5dd 239 Pfam PF16416 ARM-like repeat domain, GUN4-N terminal 5 85 5.7E-26 T 11-10-2018 IPR032192 GUN4, N-terminal ARM-like repeat domain syc2212_d a189be9a48e84e6e8b188930e7b7b5dd 239 Pfam PF05419 GUN4-like 93 232 3.0E-58 T 11-10-2018 IPR008629 GUN4-like syc2212_d a189be9a48e84e6e8b188930e7b7b5dd 239 Gene3D G3DSA:1.10.10.1770 161 238 2.9E-30 T 11-10-2018 syc2212_d a189be9a48e84e6e8b188930e7b7b5dd 239 Gene3D G3DSA:1.25.40.620 9 160 4.3E-48 T 11-10-2018 syc2212_d a189be9a48e84e6e8b188930e7b7b5dd 239 SUPERFAMILY SSF48371 6 88 1.27E-20 T 11-10-2018 IPR016024 Armadillo-type fold syc2212_d a189be9a48e84e6e8b188930e7b7b5dd 239 SUPERFAMILY SSF140869 90 234 9.16E-55 T 11-10-2018 IPR037215 GUN4-like superfamily syc0093_c 5079ba0b76fa15d31f8ec69f3012a38e 179 Gene3D G3DSA:3.40.50.300 2 176 6.4E-5 T 11-10-2018 syc0093_c 5079ba0b76fa15d31f8ec69f3012a38e 179 SUPERFAMILY SSF52540 3 173 4.04E-12 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc1974_d ad4442f9ddedff94a2bd4220105bcfcf 95 Pfam PF08846 Domain of unknown function (DUF1816) 11 74 1.6E-27 T 11-10-2018 IPR014945 Protein of unknown function DUF1816 syc1575_c 9eb6da5e26ba3f63bdf7efa9682d7f91 1068 Gene3D G3DSA:3.30.70.270 875 1045 7.5E-58 T 11-10-2018 syc1575_c 9eb6da5e26ba3f63bdf7efa9682d7f91 1068 Pfam PF13188 PAS domain 297 338 1.0E-4 T 11-10-2018 IPR000014 PAS domain syc1575_c 9eb6da5e26ba3f63bdf7efa9682d7f91 1068 SMART SM00086 520 562 3.1E-5 T 11-10-2018 IPR001610 PAC motif syc1575_c 9eb6da5e26ba3f63bdf7efa9682d7f91 1068 SMART SM00086 374 416 14.0 T 11-10-2018 IPR001610 PAC motif syc1575_c 9eb6da5e26ba3f63bdf7efa9682d7f91 1068 SMART SM00086 651 692 0.0016 T 11-10-2018 IPR001610 PAC motif syc1575_c 9eb6da5e26ba3f63bdf7efa9682d7f91 1068 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 295 423 6.1E-11 T 11-10-2018 IPR000014 PAS domain syc1575_c 9eb6da5e26ba3f63bdf7efa9682d7f91 1068 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 601 695 6.5E-10 T 11-10-2018 IPR000014 PAS domain syc1575_c 9eb6da5e26ba3f63bdf7efa9682d7f91 1068 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 456 569 5.4E-10 T 11-10-2018 IPR000014 PAS domain syc1575_c 9eb6da5e26ba3f63bdf7efa9682d7f91 1068 Gene3D G3DSA:2.10.70.100 517 563 2.0E-17 T 11-10-2018 syc1575_c 9eb6da5e26ba3f63bdf7efa9682d7f91 1068 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 876 1040 2.7E-59 T 11-10-2018 IPR000160 GGDEF domain syc1575_c 9eb6da5e26ba3f63bdf7efa9682d7f91 1068 SMART SM00267 867 1040 3.7E-68 T 11-10-2018 IPR000160 GGDEF domain syc1575_c 9eb6da5e26ba3f63bdf7efa9682d7f91 1068 Gene3D G3DSA:3.30.450.20 572 690 3.3E-26 T 11-10-2018 syc1575_c 9eb6da5e26ba3f63bdf7efa9682d7f91 1068 Gene3D G3DSA:3.30.450.40 702 874 4.2E-9 T 11-10-2018 IPR029016 GAF-like domain superfamily syc1575_c 9eb6da5e26ba3f63bdf7efa9682d7f91 1068 SMART SM00065 728 875 0.0033 T 11-10-2018 IPR003018 GAF domain GO:0005515 syc1575_c 9eb6da5e26ba3f63bdf7efa9682d7f91 1068 SMART SM00091 446 514 9.3 T 11-10-2018 IPR000014 PAS domain syc1575_c 9eb6da5e26ba3f63bdf7efa9682d7f91 1068 SMART SM00091 574 645 1.4 T 11-10-2018 IPR000014 PAS domain syc1575_c 9eb6da5e26ba3f63bdf7efa9682d7f91 1068 SMART SM00091 297 365 0.092 T 11-10-2018 IPR000014 PAS domain syc1575_c 9eb6da5e26ba3f63bdf7efa9682d7f91 1068 Gene3D G3DSA:3.30.450.20 444 514 4.0E-17 T 11-10-2018 syc1575_c 9eb6da5e26ba3f63bdf7efa9682d7f91 1068 Pfam PF08447 PAS fold 469 555 7.6E-21 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 syc1575_c 9eb6da5e26ba3f63bdf7efa9682d7f91 1068 Pfam PF08447 PAS fold 600 680 9.7E-19 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 syc1575_c 9eb6da5e26ba3f63bdf7efa9682d7f91 1068 SUPERFAMILY SSF55781 708 872 1.35E-8 T 11-10-2018 syc1575_c 9eb6da5e26ba3f63bdf7efa9682d7f91 1068 SUPERFAMILY SSF55785 286 414 2.97E-13 T 11-10-2018 IPR035965 PAS domain superfamily syc1575_c 9eb6da5e26ba3f63bdf7efa9682d7f91 1068 SUPERFAMILY SSF55785 457 563 3.14E-20 T 11-10-2018 IPR035965 PAS domain superfamily syc1575_c 9eb6da5e26ba3f63bdf7efa9682d7f91 1068 SUPERFAMILY SSF55785 559 690 9.77E-19 T 11-10-2018 IPR035965 PAS domain superfamily syc1575_c 9eb6da5e26ba3f63bdf7efa9682d7f91 1068 SUPERFAMILY SSF55073 883 1042 4.55E-49 T 11-10-2018 IPR029787 Nucleotide cyclase syc1575_c 9eb6da5e26ba3f63bdf7efa9682d7f91 1068 Gene3D G3DSA:3.30.450.20 286 429 7.6E-15 T 11-10-2018 syc1575_c 9eb6da5e26ba3f63bdf7efa9682d7f91 1068 Pfam PF00990 Diguanylate cyclase, GGDEF domain 880 1035 1.1E-49 T 11-10-2018 IPR000160 GGDEF domain syc2202_d 247c2505f888408455d5415499d65b6d 233 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 syc2202_d 247c2505f888408455d5415499d65b6d 233 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 209 229 8.0E-7 T 11-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal syc2202_d 247c2505f888408455d5415499d65b6d 233 Gene3D G3DSA:3.40.50.300 1 230 5.2E-59 T 11-10-2018 syc2202_d 247c2505f888408455d5415499d65b6d 233 SMART SM00382 7 206 7.9E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain syc2202_d 247c2505f888408455d5415499d65b6d 233 SUPERFAMILY SSF52540 2 228 2.61E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc2202_d 247c2505f888408455d5415499d65b6d 233 Pfam PF00005 ABC transporter 1 158 4.2E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 syc0136_c c44c30215799b3af0e3727078e0dd191 466 TIGRFAM TIGR01279 DPOR_bchN: light-independent protochlorophyllide reductase, N subunit 14 458 3.6E-190 T 11-10-2018 IPR005970 Light-independent protochlorophyllide reductase, N subunit GO:0015995|GO:0016730|GO:0019685|GO:0055114 KEGG: 00860+1.3.7.7|MetaCyc: PWY-5531|MetaCyc: PWY-7159 syc0136_c c44c30215799b3af0e3727078e0dd191 466 PIRSF PIRSF000162 1 460 2.3E-204 T 11-10-2018 IPR005970 Light-independent protochlorophyllide reductase, N subunit GO:0015995|GO:0016730|GO:0019685|GO:0055114 KEGG: 00860+1.3.7.7|MetaCyc: PWY-5531|MetaCyc: PWY-7159 syc0136_c c44c30215799b3af0e3727078e0dd191 466 Gene3D G3DSA:3.40.50.1980 15 449 6.0E-190 T 11-10-2018 syc0136_c c44c30215799b3af0e3727078e0dd191 466 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 23 442 3.6E-39 T 11-10-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 syc0136_c c44c30215799b3af0e3727078e0dd191 466 Gene3D G3DSA:3.40.50.1980 23 158 6.0E-190 T 11-10-2018 syc0136_c c44c30215799b3af0e3727078e0dd191 466 SUPERFAMILY SSF53807 9 448 2.19E-90 T 11-10-2018 syc0136_c c44c30215799b3af0e3727078e0dd191 466 Hamap MF_00352 Light-independent protochlorophyllide reductase subunit N [bchN]. 9 451 49.687 T 11-10-2018 IPR005970 Light-independent protochlorophyllide reductase, N subunit GO:0015995|GO:0016730|GO:0019685|GO:0055114 KEGG: 00860+1.3.7.7|MetaCyc: PWY-5531|MetaCyc: PWY-7159 syc0136_c c44c30215799b3af0e3727078e0dd191 466 Gene3D G3DSA:3.40.50.1980 159 311 6.0E-190 T 11-10-2018 syc2058_d dd7adcb9ce5d4d38d38ed25bdba43c02 340 Gene3D G3DSA:3.30.530.90 147 336 3.9E-13 T 11-10-2018 syc2058_d dd7adcb9ce5d4d38d38ed25bdba43c02 340 Pfam PF00355 Rieske [2Fe-2S] domain 18 99 1.8E-21 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 syc2058_d dd7adcb9ce5d4d38d38ed25bdba43c02 340 Gene3D G3DSA:2.102.10.10 15 146 1.0E-42 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 syc2058_d dd7adcb9ce5d4d38d38ed25bdba43c02 340 SUPERFAMILY SSF50022 14 127 1.83E-36 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 syc2058_d dd7adcb9ce5d4d38d38ed25bdba43c02 340 SUPERFAMILY SSF55961 118 336 2.2E-33 T 11-10-2018 syc0691_d 5aa4e048404cca7ae22e3c3fb15a6a48 195 Pfam PF03653 Uncharacterised protein family (UPF0093) 2 146 4.7E-50 T 11-10-2018 IPR005265 Uncharacterised protein family UPF0093 syc0691_d 5aa4e048404cca7ae22e3c3fb15a6a48 195 PIRSF PIRSF004638 147 190 90.0 T 11-10-2018 IPR005265 Uncharacterised protein family UPF0093 syc0691_d 5aa4e048404cca7ae22e3c3fb15a6a48 195 PIRSF PIRSF004638 1 150 7.9E-62 T 11-10-2018 IPR005265 Uncharacterised protein family UPF0093 syc0691_d 5aa4e048404cca7ae22e3c3fb15a6a48 195 TIGRFAM TIGR00701 TIGR00701: TIGR00701 family protein 2 145 3.9E-56 T 11-10-2018 IPR005265 Uncharacterised protein family UPF0093 syc1609_d b2a8368e5423ac712a8e488b355e8412 151 Pfam PF00334 Nucleoside diphosphate kinase 4 137 4.8E-56 T 11-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 syc1609_d b2a8368e5423ac712a8e488b355e8412 151 Gene3D G3DSA:3.30.70.141 1 151 2.3E-63 T 11-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 syc1609_d b2a8368e5423ac712a8e488b355e8412 151 SMART SM00562 3 140 1.0E-90 T 11-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 syc1609_d b2a8368e5423ac712a8e488b355e8412 151 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 36.804 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 syc1609_d b2a8368e5423ac712a8e488b355e8412 151 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 4.6E-52 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 syc1609_d b2a8368e5423ac712a8e488b355e8412 151 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 4.6E-52 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 syc1609_d b2a8368e5423ac712a8e488b355e8412 151 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 4.6E-52 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 syc1609_d b2a8368e5423ac712a8e488b355e8412 151 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 4.6E-52 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 syc1609_d b2a8368e5423ac712a8e488b355e8412 151 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 4.6E-52 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 syc1609_d b2a8368e5423ac712a8e488b355e8412 151 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 11-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 syc1609_d b2a8368e5423ac712a8e488b355e8412 151 SUPERFAMILY SSF54919 1 151 3.27E-62 T 11-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 syc1501_c f2ada7b03770bc7930ed7923ce87c3d9 176 Pfam PF07176 Alpha/beta hydrolase of unknown function (DUF1400) 24 149 2.0E-34 T 11-10-2018 IPR010802 Domain of unknown function DUF1400 syc1355_d 3362dac1d2433cacd98ecc6d3bcd5bae 327 Gene3D G3DSA:3.90.550.10 1 203 4.0E-31 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases syc1355_d 3362dac1d2433cacd98ecc6d3bcd5bae 327 Pfam PF00535 Glycosyl transferase family 2 1 130 2.3E-19 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 syc1355_d 3362dac1d2433cacd98ecc6d3bcd5bae 327 Pfam PF04138 GtrA-like protein 203 325 3.8E-25 T 11-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 syc1355_d 3362dac1d2433cacd98ecc6d3bcd5bae 327 SUPERFAMILY SSF53448 1 195 5.51E-28 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases syc2102_c 4674cb4c9e7570ef1dd587452b18d869 238 TIGRFAM TIGR01691 enolase-ppase: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 8 235 9.4E-72 T 11-10-2018 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|Reactome: R-HSA-1237112 syc2102_c 4674cb4c9e7570ef1dd587452b18d869 238 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 121 210 1.2E-5 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 syc2102_c 4674cb4c9e7570ef1dd587452b18d869 238 Gene3D G3DSA:1.10.720.60 21 113 4.2E-81 T 11-10-2018 syc2102_c 4674cb4c9e7570ef1dd587452b18d869 238 Hamap MF_01681 Enolase-phosphatase E1 [mtnC]. 6 232 39.417 T 11-10-2018 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|Reactome: R-HSA-1237112 syc2102_c 4674cb4c9e7570ef1dd587452b18d869 238 SUPERFAMILY SSF56784 6 238 1.8E-60 T 11-10-2018 IPR036412 HAD-like superfamily syc2102_c 4674cb4c9e7570ef1dd587452b18d869 238 Gene3D G3DSA:3.40.50.1000 10 225 4.2E-81 T 11-10-2018 IPR023214 HAD superfamily syc2102_c 4674cb4c9e7570ef1dd587452b18d869 238 Pfam PF00702 haloacid dehalogenase-like hydrolase 7 210 2.9E-7 T 11-10-2018 syc1827_d 8390696fa26e834274aea1e777522d2e 176 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 14 140 2.3E-38 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 syc1827_d 8390696fa26e834274aea1e777522d2e 176 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 95 106 - T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 syc1827_d 8390696fa26e834274aea1e777522d2e 176 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 14 140 1.2E-46 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 syc1827_d 8390696fa26e834274aea1e777522d2e 176 Gene3D G3DSA:3.30.70.560 10 166 4.6E-57 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 syc1827_d 8390696fa26e834274aea1e777522d2e 176 SUPERFAMILY SSF55083 10 163 2.62E-56 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 syc2396_c 073fb5bb81a8b0417da0126691fcf143 858 Gene3D G3DSA:2.120.10.90 568 852 4.0E-31 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal syc2396_c 073fb5bb81a8b0417da0126691fcf143 858 Gene3D G3DSA:3.90.199.10 37 496 1.1E-191 T 11-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 syc2396_c 073fb5bb81a8b0417da0126691fcf143 858 SUPERFAMILY SSF56719 35 497 8.37E-161 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 syc2396_c 073fb5bb81a8b0417da0126691fcf143 858 SUPERFAMILY SSF101904 588 848 1.31E-38 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal syc2396_c 073fb5bb81a8b0417da0126691fcf143 858 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 660 695 0.0028 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 syc2396_c 073fb5bb81a8b0417da0126691fcf143 858 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 754 801 2.4E-4 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 syc2396_c 073fb5bb81a8b0417da0126691fcf143 858 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 703 742 3.9E-5 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 syc2396_c 073fb5bb81a8b0417da0126691fcf143 858 SMART SM00434 16 475 1.8E-247 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 syc2396_c 073fb5bb81a8b0417da0126691fcf143 858 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 37 482 8.7E-145 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 syc2396_c 073fb5bb81a8b0417da0126691fcf143 858 Gene3D G3DSA:1.10.268.10 380 468 1.1E-191 T 11-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 syc2396_c 073fb5bb81a8b0417da0126691fcf143 858 Gene3D G3DSA:3.30.1360.40 242 343 1.1E-191 T 11-10-2018 syc1603_d a974a261a84244c467f64bbda68fa748 321 Gene3D G3DSA:3.40.50.720 1 321 3.8E-56 T 11-10-2018 syc1603_d a974a261a84244c467f64bbda68fa748 321 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 232 3.1E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR syc1603_d a974a261a84244c467f64bbda68fa748 321 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 3.1E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR syc1603_d a974a261a84244c467f64bbda68fa748 321 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 3.1E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR syc1603_d a974a261a84244c467f64bbda68fa748 321 TIGRFAM TIGR01289 LPOR: light-dependent protochlorophyllide reductase 5 321 3.6E-169 T 11-10-2018 IPR005979 Light-dependent protochlorophyllide reductase GO:0016630|GO:0055114 KEGG: 00860+1.3.1.33 syc1603_d a974a261a84244c467f64bbda68fa748 321 Pfam PF00106 short chain dehydrogenase 8 132 1.2E-18 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR syc1603_d a974a261a84244c467f64bbda68fa748 321 SUPERFAMILY SSF51735 6 270 3.22E-39 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily syc2215_d 051435bebd44a98e82528052be2f5a3e 312 Gene3D G3DSA:1.10.8.300 204 309 5.0E-23 T 11-10-2018 syc2215_d 051435bebd44a98e82528052be2f5a3e 312 PIRSF PIRSF002849 3 310 3.7E-117 T 11-10-2018 syc2215_d 051435bebd44a98e82528052be2f5a3e 312 Gene3D G3DSA:3.40.50.300 24 190 1.7E-42 T 11-10-2018 syc2215_d 051435bebd44a98e82528052be2f5a3e 312 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 43 173 2.7E-62 T 11-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 syc2215_d 051435bebd44a98e82528052be2f5a3e 312 SUPERFAMILY SSF52540 23 287 3.28E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc1938_d ce735e39b029e8e2bd66ef7da2527dc4 473 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 17 97 2.3E-29 T 11-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 syc1938_d ce735e39b029e8e2bd66ef7da2527dc4 473 SMART SM01230 104 382 1.4E-155 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 syc1938_d ce735e39b029e8e2bd66ef7da2527dc4 473 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 7 472 3.8E-206 T 11-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 syc1938_d ce735e39b029e8e2bd66ef7da2527dc4 473 Pfam PF00120 Glutamine synthetase, catalytic domain 104 470 1.1E-133 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 syc1938_d ce735e39b029e8e2bd66ef7da2527dc4 473 SUPERFAMILY SSF55931 104 473 2.26E-138 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 syc1938_d ce735e39b029e8e2bd66ef7da2527dc4 473 Gene3D G3DSA:3.30.590.10 107 461 4.0E-158 T 11-10-2018 syc1938_d ce735e39b029e8e2bd66ef7da2527dc4 473 SUPERFAMILY SSF54368 4 102 9.94E-36 T 11-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 syc1938_d ce735e39b029e8e2bd66ef7da2527dc4 473 Gene3D G3DSA:3.10.20.70 4 106 1.4E-39 T 11-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 syc1938_d ce735e39b029e8e2bd66ef7da2527dc4 473 ProSitePatterns PS00180 Glutamine synthetase signature 1. 52 70 - T 11-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 syc0468_c 698d02af73828bd43e3a374840bb1fe8 233 Gene3D G3DSA:3.40.50.720 15 154 3.7E-33 T 11-10-2018 syc0468_c 698d02af73828bd43e3a374840bb1fe8 233 Pfam PF02080 TrkA-C domain 168 231 9.5E-15 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 syc0468_c 698d02af73828bd43e3a374840bb1fe8 233 SUPERFAMILY SSF51735 19 151 4.64E-32 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily syc0468_c 698d02af73828bd43e3a374840bb1fe8 233 SUPERFAMILY SSF116726 149 231 1.44E-20 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 syc0468_c 698d02af73828bd43e3a374840bb1fe8 233 Gene3D G3DSA:3.30.70.1450 155 232 4.6E-25 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 syc0468_c 698d02af73828bd43e3a374840bb1fe8 233 Pfam PF02254 TrkA-N domain 21 138 1.8E-26 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 syc1793_d 4c710d650291fd52b44b19bb8c1eb6e3 201 SUPERFAMILY SSF52833 9 199 3.55E-69 T 11-10-2018 IPR036249 Thioredoxin-like superfamily syc1793_d 4c710d650291fd52b44b19bb8c1eb6e3 201 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 164 195 5.0E-9 T 11-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 syc1793_d 4c710d650291fd52b44b19bb8c1eb6e3 201 Gene3D G3DSA:3.40.30.10 6 201 1.4E-85 T 11-10-2018 syc1793_d 4c710d650291fd52b44b19bb8c1eb6e3 201 Pfam PF00578 AhpC/TSA family 11 143 2.3E-41 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 syc1793_d 4c710d650291fd52b44b19bb8c1eb6e3 201 PIRSF PIRSF000239 4 200 3.7E-64 T 11-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 syc0194_c f71a2e4aa84cf3b1a90382f85def6d93 436 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 102 249 1.2E-41 T 11-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain syc0194_c f71a2e4aa84cf3b1a90382f85def6d93 436 Gene3D G3DSA:1.10.260.150 74 356 1.6E-77 T 11-10-2018 syc0194_c f71a2e4aa84cf3b1a90382f85def6d93 436 Pfam PF13399 LytR cell envelope-related transcriptional attenuator 341 428 2.0E-10 T 11-10-2018 IPR027381 Putative LytR/CpsA/Psr regulator, C-terminal domain syc0194_c f71a2e4aa84cf3b1a90382f85def6d93 436 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 102 250 7.7E-42 T 11-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain syc0527_c 2163827579f3892cb8a07503b0371710 499 Pfam PF02446 4-alpha-glucanotransferase 10 476 1.7E-160 T 11-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 syc0527_c 2163827579f3892cb8a07503b0371710 499 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 4 497 1.7E-122 T 11-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 syc0527_c 2163827579f3892cb8a07503b0371710 499 SUPERFAMILY SSF51445 4 498 5.25E-170 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily syc0527_c 2163827579f3892cb8a07503b0371710 499 Gene3D G3DSA:3.20.20.80 1 498 1.3E-193 T 11-10-2018 syc1466_c a6e89ad9a6122a8334e818859d37865e 424 Gene3D G3DSA:3.40.640.10 55 326 8.2E-145 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 syc1466_c a6e89ad9a6122a8334e818859d37865e 424 Gene3D G3DSA:3.90.1150.10 6 415 8.2E-145 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 syc1466_c a6e89ad9a6122a8334e818859d37865e 424 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 7 421 1.7E-161 T 11-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 syc1466_c a6e89ad9a6122a8334e818859d37865e 424 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 237 274 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 syc1466_c a6e89ad9a6122a8334e818859d37865e 424 SUPERFAMILY SSF53383 5 424 8.68E-120 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase syc1466_c a6e89ad9a6122a8334e818859d37865e 424 Pfam PF00202 Aminotransferase class-III 16 420 6.2E-106 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 syc0575_c e3288883d03c0b814a645f50bf429e0d 300 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 1 283 1.8E-100 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 syc0575_c e3288883d03c0b814a645f50bf429e0d 300 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 1 283 33.327 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 syc0575_c e3288883d03c0b814a645f50bf429e0d 300 Gene3D G3DSA:3.30.160.40 207 292 8.6E-31 T 11-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 syc0575_c e3288883d03c0b814a645f50bf429e0d 300 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 212 281 2.5E-21 T 11-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 syc0575_c e3288883d03c0b814a645f50bf429e0d 300 PIRSF PIRSF001438 1 297 8.6E-113 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 syc0575_c e3288883d03c0b814a645f50bf429e0d 300 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 1 199 1.9E-71 T 11-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 syc0575_c e3288883d03c0b814a645f50bf429e0d 300 Gene3D G3DSA:3.40.190.10 1 196 7.9E-78 T 11-10-2018 syc0575_c e3288883d03c0b814a645f50bf429e0d 300 Gene3D G3DSA:3.40.190.10 86 188 7.9E-78 T 11-10-2018 syc0575_c e3288883d03c0b814a645f50bf429e0d 300 SUPERFAMILY SSF54782 207 294 6.15E-28 T 11-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 syc0575_c e3288883d03c0b814a645f50bf429e0d 300 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 217 233 - T 11-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 syc0575_c e3288883d03c0b814a645f50bf429e0d 300 SUPERFAMILY SSF53850 1 205 6.73E-75 T 11-10-2018 syc0575_c e3288883d03c0b814a645f50bf429e0d 300 PRINTS PR00151 Porphobilinogen deaminase signature 59 78 5.7E-50 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 syc0575_c e3288883d03c0b814a645f50bf429e0d 300 PRINTS PR00151 Porphobilinogen deaminase signature 216 233 5.7E-50 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 syc0575_c e3288883d03c0b814a645f50bf429e0d 300 PRINTS PR00151 Porphobilinogen deaminase signature 110 127 5.7E-50 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 syc0575_c e3288883d03c0b814a645f50bf429e0d 300 PRINTS PR00151 Porphobilinogen deaminase signature 28 48 5.7E-50 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 syc0575_c e3288883d03c0b814a645f50bf429e0d 300 PRINTS PR00151 Porphobilinogen deaminase signature 129 146 5.7E-50 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 syc0553_d 42b0f431175f770fac4a47910d10573d 421 Hamap MF_01308 envelope membrane protein, chloroplastic [cemA]. 192 421 37.029 T 11-10-2018 IPR004282 Chloroplast envelope membrane protein, CemA GO:0016021 syc0553_d 42b0f431175f770fac4a47910d10573d 421 Pfam PF03040 CemA family 194 421 5.9E-106 T 11-10-2018 IPR004282 Chloroplast envelope membrane protein, CemA GO:0016021 syc0813_d 9b5afa1f4b1c9a01c2135cea242594c0 174 Gene3D G3DSA:2.70.40.10 1 171 3.8E-33 T 11-10-2018 IPR036157 dUTPase-like superfamily syc0813_d 9b5afa1f4b1c9a01c2135cea242594c0 174 Pfam PF06559 2'-deoxycytidine 5'-triphosphate deaminase (DCD) 62 155 1.7E-4 T 11-10-2018 IPR010550 Deoxycytidine triphosphate deaminase, bacterial GO:0008829|GO:0009394 syc0813_d 9b5afa1f4b1c9a01c2135cea242594c0 174 SUPERFAMILY SSF51283 2 168 2.62E-31 T 11-10-2018 IPR036157 dUTPase-like superfamily syc0571_c 82932c5bbb74bcab5fc50260a3737f8d 130 Pfam PF01042 Endoribonuclease L-PSP 9 128 1.1E-46 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 syc0571_c 82932c5bbb74bcab5fc50260a3737f8d 130 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 105 123 - T 11-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 syc0571_c 82932c5bbb74bcab5fc50260a3737f8d 130 Gene3D G3DSA:3.30.1330.40 1 130 1.6E-52 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 syc0571_c 82932c5bbb74bcab5fc50260a3737f8d 130 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 4 128 6.0E-51 T 11-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 syc0571_c 82932c5bbb74bcab5fc50260a3737f8d 130 SUPERFAMILY SSF55298 1 130 1.88E-46 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 syc2195_c a64ef84ff8c8cfa5edc766b7a92434a1 193 SUPERFAMILY SSF51283 1 185 9.29E-37 T 11-10-2018 IPR036157 dUTPase-like superfamily syc2195_c a64ef84ff8c8cfa5edc766b7a92434a1 193 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 16 189 5.7E-34 T 11-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 syc2195_c a64ef84ff8c8cfa5edc766b7a92434a1 193 Pfam PF00692 dUTPase 85 165 1.8E-7 T 11-10-2018 IPR029054 dUTPase-like syc2195_c a64ef84ff8c8cfa5edc766b7a92434a1 193 Gene3D G3DSA:2.70.40.10 1 164 4.2E-41 T 11-10-2018 IPR036157 dUTPase-like superfamily syc2119_d 0060d15a2484df39118102c28199bd32 665 Pfam PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus 482 614 2.9E-17 T 11-10-2018 IPR002128 NADH:ubiquinone/plastoquinone oxidoreductase, chloroplast chain 5, C-terminal syc2119_d 0060d15a2484df39118102c28199bd32 665 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 90 115 8.6E-75 T 11-10-2018 syc2119_d 0060d15a2484df39118102c28199bd32 665 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 435 454 8.6E-75 T 11-10-2018 syc2119_d 0060d15a2484df39118102c28199bd32 665 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 326 338 8.6E-75 T 11-10-2018 syc2119_d 0060d15a2484df39118102c28199bd32 665 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 118 138 8.6E-75 T 11-10-2018 syc2119_d 0060d15a2484df39118102c28199bd32 665 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 236 257 8.6E-75 T 11-10-2018 syc2119_d 0060d15a2484df39118102c28199bd32 665 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 258 284 8.6E-75 T 11-10-2018 syc2119_d 0060d15a2484df39118102c28199bd32 665 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 165 186 8.6E-75 T 11-10-2018 syc2119_d 0060d15a2484df39118102c28199bd32 665 Pfam PF00361 Proton-conducting membrane transporter 141 438 1.8E-92 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc2119_d 0060d15a2484df39118102c28199bd32 665 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 73 129 1.2E-20 T 11-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc2119_d 0060d15a2484df39118102c28199bd32 665 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 8 660 2.4E-192 T 11-10-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc2119_d 0060d15a2484df39118102c28199bd32 665 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 434 456 2.4E-39 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 syc2119_d 0060d15a2484df39118102c28199bd32 665 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 66 90 2.4E-39 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 syc2119_d 0060d15a2484df39118102c28199bd32 665 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 92 112 2.4E-39 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 syc2119_d 0060d15a2484df39118102c28199bd32 665 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 494 515 2.4E-39 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 syc2119_d 0060d15a2484df39118102c28199bd32 665 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 276 298 2.4E-39 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 syc2119_d 0060d15a2484df39118102c28199bd32 665 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 377 399 2.4E-39 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 syc0702_d 54a1de0b99237bddc3f1af9571ba07ff 365 PIRSF PIRSF020870 7 365 2.7E-176 T 11-10-2018 IPR016779 Radical SAM enzyme, MSMEG0568 syc0702_d 54a1de0b99237bddc3f1af9571ba07ff 365 SMART SM00729 116 333 1.7E-4 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 syc0702_d 54a1de0b99237bddc3f1af9571ba07ff 365 Gene3D G3DSA:3.20.20.70 123 361 3.3E-16 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 syc0702_d 54a1de0b99237bddc3f1af9571ba07ff 365 SUPERFAMILY SSF102114 134 345 6.02E-30 T 11-10-2018 syc0702_d 54a1de0b99237bddc3f1af9571ba07ff 365 TIGRFAM TIGR04043 rSAM_MSMEG_0568: radical SAM protein, MSMEG_0568 family 14 365 2.1E-172 T 11-10-2018 IPR016779 Radical SAM enzyme, MSMEG0568 syc0702_d 54a1de0b99237bddc3f1af9571ba07ff 365 Pfam PF04055 Radical SAM superfamily 135 282 1.1E-11 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 syc2412_d c13195152c7afb1d02a7df773dd293e8 180 SUPERFAMILY SSF101112 72 177 7.06E-17 T 11-10-2018 IPR023222 PsbQ-like domain superfamily syc2412_d c13195152c7afb1d02a7df773dd293e8 180 Gene3D G3DSA:1.20.120.290 49 180 8.0E-45 T 11-10-2018 syc2412_d c13195152c7afb1d02a7df773dd293e8 180 TIGRFAM TIGR03042 PS_II_psbQ_bact: photosystem II protein PsbQ 36 178 1.3E-42 T 11-10-2018 IPR017487 Photosystem II PsbQ, cyanobacteria syc0852_d bd2b0191d16fa8e8a6914653cc3044d5 148 Gene3D G3DSA:1.10.10.10 11 132 5.4E-59 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily syc0852_d bd2b0191d16fa8e8a6914653cc3044d5 148 SUPERFAMILY SSF46785 30 133 2.56E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily syc0852_d bd2b0191d16fa8e8a6914653cc3044d5 148 Pfam PF03551 Transcriptional regulator PadR-like family 49 121 3.2E-21 T 11-10-2018 IPR005149 Transcription regulator PadR, N-terminal syc1702_c 8aecf6027928809eea6c467193d3fd92 94 SUPERFAMILY SSF50475 2 91 9.42E-11 T 11-10-2018 syc1702_c 8aecf6027928809eea6c467193d3fd92 94 Gene3D G3DSA:3.20.180.10 10 90 2.6E-22 T 11-10-2018 IPR037119 Haem oxygenase HugZ-like superfamily syc1702_c 8aecf6027928809eea6c467193d3fd92 94 Pfam PF10615 Protein of unknown function (DUF2470) 10 85 3.0E-21 T 11-10-2018 IPR019595 Domain of unknown function DUF2470 syc0293_c 7b486f04201d53674fc571ca92ae8699 137 SUPERFAMILY SSF54427 4 118 1.02E-20 T 11-10-2018 IPR032710 NTF2-like domain superfamily syc0293_c 7b486f04201d53674fc571ca92ae8699 137 Gene3D G3DSA:3.10.450.50 13 128 6.3E-11 T 11-10-2018 syc0293_c 7b486f04201d53674fc571ca92ae8699 137 Pfam PF10184 Uncharacterized conserved protein (DUF2358) 7 112 1.3E-31 T 11-10-2018 IPR018790 Protein of unknown function DUF2358 syc0972_c 77bfe7afd4f0ef4a3dfabd6b14c4bba7 253 TIGRFAM TIGR03716 R_switched_YkoY: integral membrane protein, YkoY family 31 210 2.1E-50 T 11-10-2018 IPR022493 Integral membrane YkoY syc0972_c 77bfe7afd4f0ef4a3dfabd6b14c4bba7 253 Pfam PF03741 Integral membrane protein TerC family 32 203 1.7E-42 T 11-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 syc0972_c 77bfe7afd4f0ef4a3dfabd6b14c4bba7 253 SUPERFAMILY SSF103473 20 229 1.22E-5 T 11-10-2018 IPR036259 MFS transporter superfamily syc1945_c 460845f61ba83f5948040a4e302166ab 136 Pfam PF01850 PIN domain 5 117 8.2E-8 T 11-10-2018 IPR002716 PIN domain syc1945_c 460845f61ba83f5948040a4e302166ab 136 Gene3D G3DSA:3.40.50.1010 4 127 3.3E-20 T 11-10-2018 syc1945_c 460845f61ba83f5948040a4e302166ab 136 SUPERFAMILY SSF88723 1 124 5.89E-22 T 11-10-2018 IPR029060 PIN-like domain superfamily syc0940_c dcaeadbfcabfc2519face7a0def130ea 364 TIGRFAM TIGR02030 BchI-ChlI: magnesium chelatase ATPase subunit I 14 349 1.9E-176 T 11-10-2018 IPR011775 Magnesium chelatase, ATPase subunit I GO:0005524|GO:0015995|GO:0016851 KEGG: 00860+6.6.1.1|MetaCyc: PWY-5531|MetaCyc: PWY-7159 syc0940_c dcaeadbfcabfc2519face7a0def130ea 364 SMART SM00382 37 219 9.8E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain syc0940_c dcaeadbfcabfc2519face7a0def130ea 364 SUPERFAMILY SSF52540 14 338 4.99E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0940_c dcaeadbfcabfc2519face7a0def130ea 364 Gene3D G3DSA:1.10.8.80 261 349 6.4E-28 T 11-10-2018 syc0940_c dcaeadbfcabfc2519face7a0def130ea 364 Gene3D G3DSA:3.40.50.300 11 216 1.1E-65 T 11-10-2018 syc0940_c dcaeadbfcabfc2519face7a0def130ea 364 Pfam PF01078 Magnesium chelatase, subunit ChlI 127 196 2.5E-7 T 11-10-2018 IPR000523 Magnesium chelatase ChlI domain syc1310_d 6eea02442e05668604077f73ab0ce776 250 SUPERFAMILY SSF46626 3 157 1.64E-17 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 syc1310_d 6eea02442e05668604077f73ab0ce776 250 Gene3D G3DSA:1.10.760.10 33 200 4.3E-35 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 syc1310_d 6eea02442e05668604077f73ab0ce776 250 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 5 164 1.8E-24 T 11-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO syc0582_c f8021242fc7cf6049f9e900e9b01b300 434 SUPERFAMILY SSF52540 46 316 1.13E-78 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0582_c f8021242fc7cf6049f9e900e9b01b300 434 Gene3D G3DSA:3.40.50.300 43 293 3.9E-61 T 11-10-2018 syc0582_c f8021242fc7cf6049f9e900e9b01b300 434 Gene3D G3DSA:2.40.50.940 294 424 3.6E-35 T 11-10-2018 syc0582_c f8021242fc7cf6049f9e900e9b01b300 434 Gene3D G3DSA:2.40.50.140 358 415 3.6E-35 T 11-10-2018 syc0582_c f8021242fc7cf6049f9e900e9b01b300 434 SMART SM00382 76 283 3.6E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain syc0582_c f8021242fc7cf6049f9e900e9b01b300 434 Pfam PF00005 ABC transporter 67 233 7.9E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 syc0582_c f8021242fc7cf6049f9e900e9b01b300 434 SUPERFAMILY SSF50331 308 431 5.1E-28 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal syc0582_c f8021242fc7cf6049f9e900e9b01b300 434 Pfam PF08402 TOBE domain 351 423 3.1E-10 T 11-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 syc0582_c f8021242fc7cf6049f9e900e9b01b300 434 ProSitePatterns PS00211 ABC transporters family signature. 206 220 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 syc2161_c 3d7c9b32d8eff95796ebd6b360e91d5b 348 Pfam PF01070 FMN-dependent dehydrogenase 183 325 3.5E-19 T 11-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 syc2161_c 3d7c9b32d8eff95796ebd6b360e91d5b 348 Pfam PF01070 FMN-dependent dehydrogenase 7 104 3.1E-6 T 11-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 syc2161_c 3d7c9b32d8eff95796ebd6b360e91d5b 348 Hamap MF_00354 Isopentenyl-diphosphate delta-isomerase [fni]. 11 347 40.003 T 11-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 syc2161_c 3d7c9b32d8eff95796ebd6b360e91d5b 348 PIRSF PIRSF003314 8 347 2.0E-120 T 11-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 syc2161_c 3d7c9b32d8eff95796ebd6b360e91d5b 348 Gene3D G3DSA:3.20.20.70 9 346 1.2E-123 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 syc2161_c 3d7c9b32d8eff95796ebd6b360e91d5b 348 TIGRFAM TIGR02151 IPP_isom_2: isopentenyl-diphosphate delta-isomerase, type 2 13 341 7.8E-119 T 11-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 syc2161_c 3d7c9b32d8eff95796ebd6b360e91d5b 348 SUPERFAMILY SSF51395 34 341 8.96E-74 T 11-10-2018 syc0125_c 1ef93ac126a6af237ed5ef67f9b02277 145 Gene3D G3DSA:2.40.100.10 1 144 2.6E-52 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily syc0125_c 1ef93ac126a6af237ed5ef67f9b02277 145 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 38 55 - T 11-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 syc0125_c 1ef93ac126a6af237ed5ef67f9b02277 145 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 109 124 3.0E-23 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 syc0125_c 1ef93ac126a6af237ed5ef67f9b02277 145 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 17 32 3.0E-23 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 syc0125_c 1ef93ac126a6af237ed5ef67f9b02277 145 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 43 55 3.0E-23 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 syc0125_c 1ef93ac126a6af237ed5ef67f9b02277 145 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 81 96 3.0E-23 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 syc0125_c 1ef93ac126a6af237ed5ef67f9b02277 145 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 96 108 3.0E-23 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 syc0125_c 1ef93ac126a6af237ed5ef67f9b02277 145 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 6 133 3.9E-39 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 syc0125_c 1ef93ac126a6af237ed5ef67f9b02277 145 PIRSF PIRSF001467 1 145 4.8E-38 T 11-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 syc0125_c 1ef93ac126a6af237ed5ef67f9b02277 145 SUPERFAMILY SSF50891 3 134 1.9E-47 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily syc2111_d 6373a6c34a9bd63316e95ffbce9cde8c 297 PIRSF PIRSF006221 7 296 5.2E-99 T 11-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 syc2111_d 6373a6c34a9bd63316e95ffbce9cde8c 297 Gene3D G3DSA:3.90.1200.10 104 296 3.2E-73 T 11-10-2018 syc2111_d 6373a6c34a9bd63316e95ffbce9cde8c 297 Gene3D G3DSA:3.30.200.20 6 100 1.1E-18 T 11-10-2018 syc2111_d 6373a6c34a9bd63316e95ffbce9cde8c 297 Pfam PF03881 Fructosamine kinase 8 294 2.7E-118 T 11-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 syc2111_d 6373a6c34a9bd63316e95ffbce9cde8c 297 SUPERFAMILY SSF56112 27 290 4.21E-51 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily syc1748_d f54ab1de41f982448e840b1700fd1333 107 Pfam PF05597 Poly(hydroxyalcanoate) granule associated protein (phasin) 30 102 7.8E-7 T 11-10-2018 IPR008769 Poly granule associated syc0713_c dab6950c5bbf3f5e568d3e2324e896f0 311 Pfam PF13354 Beta-lactamase enzyme family 103 275 8.6E-11 T 11-10-2018 syc0713_c dab6950c5bbf3f5e568d3e2324e896f0 311 SUPERFAMILY SSF56601 19 308 4.19E-31 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like syc0713_c dab6950c5bbf3f5e568d3e2324e896f0 311 Gene3D G3DSA:3.40.710.10 62 310 2.6E-36 T 11-10-2018 syc2314_c 7aa53e03e1f63eb58b46349f538b21ed 588 TIGRFAM TIGR00634 recN: DNA repair protein RecN 8 565 3.9E-164 T 11-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 syc2314_c 7aa53e03e1f63eb58b46349f538b21ed 588 Gene3D G3DSA:3.40.50.300 7 282 7.8E-40 T 11-10-2018 syc2314_c 7aa53e03e1f63eb58b46349f538b21ed 588 Gene3D G3DSA:3.40.50.300 283 565 2.8E-60 T 11-10-2018 syc2314_c 7aa53e03e1f63eb58b46349f538b21ed 588 SUPERFAMILY SSF52540 8 522 1.68E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc2314_c 7aa53e03e1f63eb58b46349f538b21ed 588 Pfam PF02463 RecF/RecN/SMC N terminal domain 8 521 2.8E-17 T 11-10-2018 IPR003395 RecF/RecN/SMC, N-terminal syc2314_c 7aa53e03e1f63eb58b46349f538b21ed 588 PIRSF PIRSF003128 8 569 3.4E-146 T 11-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 syc2130_c da8f2dd7e070ab00ed09bb130f5a2b6a 566 Gene3D G3DSA:1.10.3210.10 360 561 2.2E-48 T 11-10-2018 syc2130_c da8f2dd7e070ab00ed09bb130f5a2b6a 566 SUPERFAMILY SSF53067 168 349 1.3E-43 T 11-10-2018 syc2130_c da8f2dd7e070ab00ed09bb130f5a2b6a 566 Gene3D G3DSA:3.30.420.150 164 350 4.3E-54 T 11-10-2018 syc2130_c da8f2dd7e070ab00ed09bb130f5a2b6a 566 Pfam PF01966 HD domain 381 501 3.8E-12 T 11-10-2018 IPR006674 HD domain syc2130_c da8f2dd7e070ab00ed09bb130f5a2b6a 566 SUPERFAMILY SSF109604 363 553 1.82E-50 T 11-10-2018 syc2130_c da8f2dd7e070ab00ed09bb130f5a2b6a 566 SUPERFAMILY SSF53067 40 163 8.09E-35 T 11-10-2018 syc2130_c da8f2dd7e070ab00ed09bb130f5a2b6a 566 Gene3D G3DSA:3.30.420.40 32 162 4.3E-37 T 11-10-2018 syc2130_c da8f2dd7e070ab00ed09bb130f5a2b6a 566 Pfam PF02541 Ppx/GppA phosphatase family 53 350 1.2E-81 T 11-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 syc1457_d 5c8b6505a75db605304d43ed7e8a6e8c 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 78 18.55 T 11-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc1457_d 5c8b6505a75db605304d43ed7e8a6e8c 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 6.3E-26 T 11-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc1457_d 5c8b6505a75db605304d43ed7e8a6e8c 78 Gene3D G3DSA:2.30.170.40 2 78 6.1E-29 T 11-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc1457_d 5c8b6505a75db605304d43ed7e8a6e8c 78 Pfam PF00830 Ribosomal L28 family 3 62 8.0E-23 T 11-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc1457_d 5c8b6505a75db605304d43ed7e8a6e8c 78 SUPERFAMILY SSF143800 2 75 1.35E-26 T 11-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc1657_c bf62f112efb004f0e507d407c2839981 211 SUPERFAMILY SSF52833 3 208 4.71E-71 T 11-10-2018 IPR036249 Thioredoxin-like superfamily syc1657_c bf62f112efb004f0e507d407c2839981 211 Gene3D G3DSA:3.30.1020.10 146 209 3.3E-28 T 11-10-2018 syc1657_c bf62f112efb004f0e507d407c2839981 211 Pfam PF00578 AhpC/TSA family 6 134 1.4E-30 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 syc1657_c bf62f112efb004f0e507d407c2839981 211 PIRSF PIRSF000239 1 208 5.4E-78 T 11-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 syc1657_c bf62f112efb004f0e507d407c2839981 211 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 195 1.5E-11 T 11-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 syc1657_c bf62f112efb004f0e507d407c2839981 211 Gene3D G3DSA:3.40.30.10 1 145 3.5E-50 T 11-10-2018 syc1060_d 8f066b49a834d15d15d39b1c7de4d9e0 278 Gene3D G3DSA:3.40.50.1820 1 277 2.6E-88 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold syc1060_d 8f066b49a834d15d15d39b1c7de4d9e0 278 Pfam PF00756 Putative esterase 21 270 1.4E-58 T 11-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 syc1060_d 8f066b49a834d15d15d39b1c7de4d9e0 278 SUPERFAMILY SSF53474 1 277 5.93E-89 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold syc1060_d 8f066b49a834d15d15d39b1c7de4d9e0 278 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 2 276 2.5E-123 T 11-10-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 syc0042_c 329de3d99038cf4ddebb9b4afa8b793d 270 SMART SM00644 95 246 0.0067 T 11-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 syc0042_c 329de3d99038cf4ddebb9b4afa8b793d 270 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 106 245 3.9E-9 T 11-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 syc0042_c 329de3d99038cf4ddebb9b4afa8b793d 270 SUPERFAMILY SSF55846 85 259 5.76E-25 T 11-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 syc0042_c 329de3d99038cf4ddebb9b4afa8b793d 270 Gene3D G3DSA:3.40.80.10 105 257 2.6E-19 T 11-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 syc0163_d 83da940757cdeb3f6a28b8736620aecc 1355 Gene3D G3DSA:3.90.780.10 367 591 1.8E-48 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 syc0163_d 83da940757cdeb3f6a28b8736620aecc 1355 SUPERFAMILY SSF51004 665 1190 5.49E-20 T 11-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily syc0163_d 83da940757cdeb3f6a28b8736620aecc 1355 Gene3D G3DSA:3.60.21.10 4 347 6.5E-64 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like syc0163_d 83da940757cdeb3f6a28b8736620aecc 1355 SUPERFAMILY SSF56300 4 356 5.31E-44 T 11-10-2018 syc0163_d 83da940757cdeb3f6a28b8736620aecc 1355 Pfam PF02872 5'-nucleotidase, C-terminal domain 369 568 2.1E-24 T 11-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 syc0163_d 83da940757cdeb3f6a28b8736620aecc 1355 PRINTS PR01607 Apyrase family signature 243 266 1.5E-8 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 syc0163_d 83da940757cdeb3f6a28b8736620aecc 1355 PRINTS PR01607 Apyrase family signature 454 477 1.5E-8 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 syc0163_d 83da940757cdeb3f6a28b8736620aecc 1355 PRINTS PR01607 Apyrase family signature 545 564 1.5E-8 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 syc0163_d 83da940757cdeb3f6a28b8736620aecc 1355 PRINTS PR01607 Apyrase family signature 291 311 1.5E-8 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 syc0163_d 83da940757cdeb3f6a28b8736620aecc 1355 SUPERFAMILY SSF55816 368 577 3.92E-33 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 syc0163_d 83da940757cdeb3f6a28b8736620aecc 1355 Gene3D G3DSA:2.130.10.10 630 885 1.6E-18 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 syc0163_d 83da940757cdeb3f6a28b8736620aecc 1355 Pfam PF13946 Domain of unknown function (DUF4214) 1223 1280 1.6E-6 T 11-10-2018 IPR025282 Domain of unknown function DUF4214 syc1810_d ffdbdff3648b2a9845ef52af1aa75bb2 244 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 2 242 35.604 T 11-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 syc1810_d ffdbdff3648b2a9845ef52af1aa75bb2 244 Pfam PF02348 Cytidylyltransferase 6 216 1.3E-48 T 11-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 syc1810_d ffdbdff3648b2a9845ef52af1aa75bb2 244 Gene3D G3DSA:3.90.550.10 1 241 4.3E-82 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases syc1810_d ffdbdff3648b2a9845ef52af1aa75bb2 244 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 5 235 4.8E-57 T 11-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 syc1810_d ffdbdff3648b2a9845ef52af1aa75bb2 244 SUPERFAMILY SSF53448 3 242 7.04E-59 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases syc0182_d 58167aecc27c2fdee3c6a2986c9ca465 543 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 387 401 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 syc0182_d 58167aecc27c2fdee3c6a2986c9ca465 543 Gene3D G3DSA:3.30.2350.10 330 541 2.7E-61 T 11-10-2018 syc0182_d 58167aecc27c2fdee3c6a2986c9ca465 543 SUPERFAMILY SSF55120 334 542 8.64E-58 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 syc0182_d 58167aecc27c2fdee3c6a2986c9ca465 543 Pfam PF00849 RNA pseudouridylate synthase 347 496 9.8E-28 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 syc2381_c 7757d77d705c60569cef12297c17aa13 76 SUPERFAMILY SSF63562 17 70 2.96E-7 T 11-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 syc2381_c 7757d77d705c60569cef12297c17aa13 76 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 11 72 11.77 T 11-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 syc2381_c 7757d77d705c60569cef12297c17aa13 76 Pfam PF01192 RNA polymerase Rpb6 23 69 4.1E-7 T 11-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 syc1592_c 55aaa60a0e68a9638abe4bddf6fc61f9 305 Gene3D G3DSA:3.40.50.1370 131 289 7.3E-115 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 syc1592_c 55aaa60a0e68a9638abe4bddf6fc61f9 305 PRINTS PR00102 Ornithine carbamoyltransferase signature 44 58 1.9E-29 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 syc1592_c 55aaa60a0e68a9638abe4bddf6fc61f9 305 PRINTS PR00102 Ornithine carbamoyltransferase signature 117 131 1.9E-29 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 syc1592_c 55aaa60a0e68a9638abe4bddf6fc61f9 305 PRINTS PR00102 Ornithine carbamoyltransferase signature 219 229 1.9E-29 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 syc1592_c 55aaa60a0e68a9638abe4bddf6fc61f9 305 PRINTS PR00102 Ornithine carbamoyltransferase signature 281 292 1.9E-29 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 syc1592_c 55aaa60a0e68a9638abe4bddf6fc61f9 305 PRINTS PR00102 Ornithine carbamoyltransferase signature 77 90 1.9E-29 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 syc1592_c 55aaa60a0e68a9638abe4bddf6fc61f9 305 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 5 303 78.31 T 11-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 syc1592_c 55aaa60a0e68a9638abe4bddf6fc61f9 305 Gene3D G3DSA:3.40.50.1370 12 298 7.3E-115 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 syc1592_c 55aaa60a0e68a9638abe4bddf6fc61f9 305 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 148 300 1.3E-54 T 11-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 syc1592_c 55aaa60a0e68a9638abe4bddf6fc61f9 305 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 6 141 5.3E-47 T 11-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 syc1592_c 55aaa60a0e68a9638abe4bddf6fc61f9 305 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 6 302 3.2E-125 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 syc1592_c 55aaa60a0e68a9638abe4bddf6fc61f9 305 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 46 53 - T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 syc1592_c 55aaa60a0e68a9638abe4bddf6fc61f9 305 SUPERFAMILY SSF53671 2 303 2.62E-103 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 syc1592_c 55aaa60a0e68a9638abe4bddf6fc61f9 305 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 267 290 1.2E-24 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 syc1592_c 55aaa60a0e68a9638abe4bddf6fc61f9 305 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 46 65 1.2E-24 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 syc1592_c 55aaa60a0e68a9638abe4bddf6fc61f9 305 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 128 139 1.2E-24 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 syc1592_c 55aaa60a0e68a9638abe4bddf6fc61f9 305 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 255 264 1.2E-24 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 syc2194_d 1e9c7f80daad534f6ced9059366f923c 793 Gene3D G3DSA:3.40.50.2000 404 612 8.5E-11 T 11-10-2018 syc2194_d 1e9c7f80daad534f6ced9059366f923c 793 Gene3D G3DSA:3.40.50.2000 197 367 2.3E-37 T 11-10-2018 syc2194_d 1e9c7f80daad534f6ced9059366f923c 793 Gene3D G3DSA:3.40.50.2000 158 381 2.3E-37 T 11-10-2018 syc2194_d 1e9c7f80daad534f6ced9059366f923c 793 Gene3D G3DSA:3.40.50.2000 615 759 6.1E-13 T 11-10-2018 syc2194_d 1e9c7f80daad534f6ced9059366f923c 793 SUPERFAMILY SSF53756 12 384 7.85E-46 T 11-10-2018 syc2194_d 1e9c7f80daad534f6ced9059366f923c 793 Pfam PF13692 Glycosyl transferases group 1 623 729 5.9E-10 T 11-10-2018 syc2194_d 1e9c7f80daad534f6ced9059366f923c 793 Pfam PF13439 Glycosyltransferase Family 4 411 600 6.8E-9 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 syc2194_d 1e9c7f80daad534f6ced9059366f923c 793 SUPERFAMILY SSF53756 403 792 5.23E-27 T 11-10-2018 syc2194_d 1e9c7f80daad534f6ced9059366f923c 793 Pfam PF00534 Glycosyl transferases group 1 215 364 1.1E-29 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 syc1994_c a57678a19b5d52c5209566f71bd1225f 289 Gene3D G3DSA:3.40.50.720 3 272 3.6E-95 T 11-10-2018 syc1994_c a57678a19b5d52c5209566f71bd1225f 289 SUPERFAMILY SSF51735 1 285 5.85E-93 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily syc1994_c a57678a19b5d52c5209566f71bd1225f 289 Pfam PF04321 RmlD substrate binding domain 1 285 9.9E-94 T 11-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 syc1994_c a57678a19b5d52c5209566f71bd1225f 289 Gene3D G3DSA:3.90.25.10 159 279 3.6E-95 T 11-10-2018 syc1994_c a57678a19b5d52c5209566f71bd1225f 289 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 2 284 3.5E-92 T 11-10-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 syc1581_c f49045e8b8d3f3ff129b334030b897da 213 Pfam PF04970 Lecithin retinol acyltransferase 35 97 1.1E-13 T 11-10-2018 IPR007053 LRAT-like domain syc2266_c c08a4c48aa699f759dd88579eb308d24 85 Pfam PF09493 Tryptophan-rich protein (DUF2389) 13 71 2.6E-25 T 11-10-2018 IPR012663 Conserved hypothetical protein CHP02450, tryptophan-rich syc2266_c c08a4c48aa699f759dd88579eb308d24 85 TIGRFAM TIGR02450 TIGR02450: tryptophan-rich conserved hypothetical protein 12 71 3.7E-23 T 11-10-2018 IPR012663 Conserved hypothetical protein CHP02450, tryptophan-rich syc1303_d 8cceb54c57fff1c8fb01df613c809f2f 208 Hamap MF_00528 Septum formation protein Maf [maf]. 14 202 28.888 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 syc1303_d 8cceb54c57fff1c8fb01df613c809f2f 208 Pfam PF02545 Maf-like protein 14 195 9.6E-51 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 syc1303_d 8cceb54c57fff1c8fb01df613c809f2f 208 PIRSF PIRSF006305 8 202 1.4E-46 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 syc1303_d 8cceb54c57fff1c8fb01df613c809f2f 208 TIGRFAM TIGR00172 maf: septum formation protein Maf 13 195 2.8E-55 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 syc1303_d 8cceb54c57fff1c8fb01df613c809f2f 208 SUPERFAMILY SSF52972 11 195 8.5E-57 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like syc1303_d 8cceb54c57fff1c8fb01df613c809f2f 208 Gene3D G3DSA:3.90.950.10 13 202 8.2E-62 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like syc1319_d 9b8b33646b9e64b000e5b6deaa3d5297 158 Pfam PF16166 Chloroplast import apparatus Tic20-like 12 152 7.0E-30 T 11-10-2018 IPR005691 Chloroplast protein import component Tic20 syc0405_d f1f73ad969b303e41e67e087593296d7 108 Pfam PF00462 Glutaredoxin 19 83 1.7E-20 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 syc0405_d f1f73ad969b303e41e67e087593296d7 108 Gene3D G3DSA:3.40.30.10 9 104 6.3E-35 T 11-10-2018 syc0405_d f1f73ad969b303e41e67e087593296d7 108 PIRSF PIRSF005894 1 108 6.5E-46 T 11-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 syc0405_d f1f73ad969b303e41e67e087593296d7 108 SUPERFAMILY SSF52833 5 103 6.26E-35 T 11-10-2018 IPR036249 Thioredoxin-like superfamily syc0405_d f1f73ad969b303e41e67e087593296d7 108 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 7 103 7.2E-44 T 11-10-2018 IPR004480 Monothiol glutaredoxin-related syc1746_d 2419c9328cf559fb245d58f6381ed075 481 Pfam PF02638 Glycosyl hydrolase-like 10 116 259 1.9E-7 T 11-10-2018 IPR003790 Glycosyl hydrolase-like 10 syc1746_d 2419c9328cf559fb245d58f6381ed075 481 SUPERFAMILY SSF51445 96 349 3.42E-8 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily syc2457_c 298df80b9e59d6c2c701d18cdae4e892 97 Pfam PF03334 Na+/H+ antiporter subunit 9 84 2.0E-16 T 11-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 syc0484_c 9c77bdaee20e19044de5abbafc81eac8 453 Pfam PF01420 Type I restriction modification DNA specificity domain 129 195 3.4E-5 T 11-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 syc0484_c 9c77bdaee20e19044de5abbafc81eac8 453 Pfam PF01420 Type I restriction modification DNA specificity domain 243 421 3.7E-10 T 11-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 syc0484_c 9c77bdaee20e19044de5abbafc81eac8 453 SUPERFAMILY SSF116734 6 227 4.25E-39 T 11-10-2018 syc0484_c 9c77bdaee20e19044de5abbafc81eac8 453 Gene3D G3DSA:3.90.220.20 246 393 2.8E-72 T 11-10-2018 syc0484_c 9c77bdaee20e19044de5abbafc81eac8 453 Gene3D G3DSA:1.10.287.1120 174 440 2.8E-72 T 11-10-2018 syc0484_c 9c77bdaee20e19044de5abbafc81eac8 453 SUPERFAMILY SSF116734 226 447 4.91E-37 T 11-10-2018 syc0484_c 9c77bdaee20e19044de5abbafc81eac8 453 Gene3D G3DSA:3.90.220.20 19 444 2.8E-72 T 11-10-2018 syc1158_d e9ebdde9dd38350d0836619e46af6676 137 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 5 111 25.344 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 syc1158_d e9ebdde9dd38350d0836619e46af6676 137 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 8 98 3.0E-46 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 syc1158_d e9ebdde9dd38350d0836619e46af6676 137 ProSitePatterns PS01319 Ribosome-binding factor A signature. 77 98 - T 11-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 syc1158_d e9ebdde9dd38350d0836619e46af6676 137 Pfam PF02033 Ribosome-binding factor A 6 111 8.3E-30 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 syc1158_d e9ebdde9dd38350d0836619e46af6676 137 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 116 3.2E-37 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 syc1158_d e9ebdde9dd38350d0836619e46af6676 137 SUPERFAMILY SSF89919 1 114 3.14E-33 T 11-10-2018 IPR023799 Ribosome-binding factor A domain superfamily syc1158_d e9ebdde9dd38350d0836619e46af6676 137 Gene3D G3DSA:3.30.300.20 2 120 2.0E-32 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta syc1304_c 38766ada55eaf56a10c05f63e591bcac 923 SUPERFAMILY SSF53756 656 894 2.48E-13 T 11-10-2018 syc1304_c 38766ada55eaf56a10c05f63e591bcac 923 SUPERFAMILY SSF48452 467 631 8.22E-22 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc1304_c 38766ada55eaf56a10c05f63e591bcac 923 Pfam PF13432 Tetratricopeptide repeat 471 533 5.5E-7 T 11-10-2018 syc1304_c 38766ada55eaf56a10c05f63e591bcac 923 Pfam PF13432 Tetratricopeptide repeat 11 75 4.2E-5 T 11-10-2018 syc1304_c 38766ada55eaf56a10c05f63e591bcac 923 Pfam PF13432 Tetratricopeptide repeat 80 143 2.8E-9 T 11-10-2018 syc1304_c 38766ada55eaf56a10c05f63e591bcac 923 Pfam PF13432 Tetratricopeptide repeat 544 602 6.7E-5 T 11-10-2018 syc1304_c 38766ada55eaf56a10c05f63e591bcac 923 SUPERFAMILY SSF53756 197 434 2.26E-19 T 11-10-2018 syc1304_c 38766ada55eaf56a10c05f63e591bcac 923 SMART SM00028 41 74 0.2 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc1304_c 38766ada55eaf56a10c05f63e591bcac 923 SMART SM00028 109 142 5.8E-5 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc1304_c 38766ada55eaf56a10c05f63e591bcac 923 SMART SM00028 500 533 3.4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc1304_c 38766ada55eaf56a10c05f63e591bcac 923 SMART SM00028 143 176 270.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc1304_c 38766ada55eaf56a10c05f63e591bcac 923 SMART SM00028 75 108 6.2E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc1304_c 38766ada55eaf56a10c05f63e591bcac 923 SMART SM00028 568 601 0.21 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc1304_c 38766ada55eaf56a10c05f63e591bcac 923 SMART SM00028 534 567 140.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc1304_c 38766ada55eaf56a10c05f63e591bcac 923 SUPERFAMILY SSF48452 9 171 1.96E-31 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc1304_c 38766ada55eaf56a10c05f63e591bcac 923 Gene3D G3DSA:1.25.40.10 3 195 1.1E-34 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc1304_c 38766ada55eaf56a10c05f63e591bcac 923 Gene3D G3DSA:1.25.40.10 428 630 1.5E-25 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc0258_d efdd60e3adfeaa3a1d8d0457809de6e4 462 SMART SM00563 66 210 1.2E-11 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 syc0258_d efdd60e3adfeaa3a1d8d0457809de6e4 462 Pfam PF01553 Acyltransferase 120 207 9.4E-8 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 syc0258_d efdd60e3adfeaa3a1d8d0457809de6e4 462 SUPERFAMILY SSF69593 116 209 4.58E-10 T 11-10-2018 syc0620_d 99df8b1e21a501536b5637d81393c5f1 300 Gene3D G3DSA:3.40.50.620 6 288 3.2E-92 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold syc0620_d 99df8b1e21a501536b5637d81393c5f1 300 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 7 242 1.6E-38 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 syc0620_d 99df8b1e21a501536b5637d81393c5f1 300 SUPERFAMILY SSF52374 6 295 2.57E-77 T 11-10-2018 syc0620_d 99df8b1e21a501536b5637d81393c5f1 300 PRINTS PR00987 Glutamyl-tRNA synthetase signature 37 50 1.0E-11 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 syc0620_d 99df8b1e21a501536b5637d81393c5f1 300 PRINTS PR00987 Glutamyl-tRNA synthetase signature 179 189 1.0E-11 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 syc0620_d 99df8b1e21a501536b5637d81393c5f1 300 PRINTS PR00987 Glutamyl-tRNA synthetase signature 8 20 1.0E-11 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 syc0620_d 99df8b1e21a501536b5637d81393c5f1 300 PRINTS PR00987 Glutamyl-tRNA synthetase signature 195 203 1.0E-11 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 syc0620_d 99df8b1e21a501536b5637d81393c5f1 300 Gene3D G3DSA:3.40.50.620 80 227 3.2E-92 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold syc0620_d 99df8b1e21a501536b5637d81393c5f1 300 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 5 299 41.017 T 11-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 syc0620_d 99df8b1e21a501536b5637d81393c5f1 300 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 6 278 3.5E-106 T 11-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 syc2134_c c37ebbc4b12a722dd4e33c4c8e242ae1 182 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 89 124 5.4E-8 T 11-10-2018 IPR001451 Hexapeptide repeat syc2134_c c37ebbc4b12a722dd4e33c4c8e242ae1 182 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 98 126 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 syc2134_c c37ebbc4b12a722dd4e33c4c8e242ae1 182 SUPERFAMILY SSF51161 15 166 2.08E-44 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily syc2134_c c37ebbc4b12a722dd4e33c4c8e242ae1 182 Gene3D G3DSA:2.160.10.10 8 181 5.4E-58 T 11-10-2018 syc1856_d a31c56c513fa91fa028900aa422f33d3 330 SUPERFAMILY SSF55874 129 281 3.31E-9 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily syc1856_d a31c56c513fa91fa028900aa422f33d3 330 SUPERFAMILY SSF47384 69 141 7.06E-10 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 syc1856_d a31c56c513fa91fa028900aa422f33d3 330 Gene3D G3DSA:1.10.287.130 63 142 4.6E-10 T 11-10-2018 syc1856_d a31c56c513fa91fa028900aa422f33d3 330 Pfam PF00512 His Kinase A (phospho-acceptor) domain 78 139 8.6E-7 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 syc1856_d a31c56c513fa91fa028900aa422f33d3 330 Gene3D G3DSA:3.30.565.10 145 284 4.7E-6 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily syc1856_d a31c56c513fa91fa028900aa422f33d3 330 SMART SM00388 73 140 8.3E-9 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 syc0268_d 66a59cdf7c106cd3328bf6a062e2738d 323 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 3 142 1.4E-48 T 11-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 syc0268_d 66a59cdf7c106cd3328bf6a062e2738d 323 PIRSF PIRSF036594 5 323 5.1E-185 T 11-10-2018 IPR012247 Bifunctional molybdenum cofactor biosynthesis protein MoaC/MogA GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823 syc0268_d 66a59cdf7c106cd3328bf6a062e2738d 323 Pfam PF01967 MoaC family 5 140 2.6E-45 T 11-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 syc0268_d 66a59cdf7c106cd3328bf6a062e2738d 323 Gene3D G3DSA:3.30.70.640 2 154 5.4E-53 T 11-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 syc0268_d 66a59cdf7c106cd3328bf6a062e2738d 323 Gene3D G3DSA:3.40.980.10 162 322 1.0E-40 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily syc0268_d 66a59cdf7c106cd3328bf6a062e2738d 323 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 166 301 5.6E-26 T 11-10-2018 IPR001453 MoaB/Mog domain syc0268_d 66a59cdf7c106cd3328bf6a062e2738d 323 SMART SM00852 166 309 5.6E-22 T 11-10-2018 IPR001453 MoaB/Mog domain syc0268_d 66a59cdf7c106cd3328bf6a062e2738d 323 SUPERFAMILY SSF55040 3 145 1.2E-49 T 11-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 syc0268_d 66a59cdf7c106cd3328bf6a062e2738d 323 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 225 238 - T 11-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 syc0268_d 66a59cdf7c106cd3328bf6a062e2738d 323 Pfam PF00994 Probable molybdopterin binding domain 167 308 7.1E-29 T 11-10-2018 IPR001453 MoaB/Mog domain syc0268_d 66a59cdf7c106cd3328bf6a062e2738d 323 SUPERFAMILY SSF53218 164 315 7.2E-34 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily syc0240_c 57a2d4e494866a4cf6ec9d069ef2e26a 599 PRINTS PR01042 Aspartyl-tRNA synthetase signature 197 209 3.1E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 syc0240_c 57a2d4e494866a4cf6ec9d069ef2e26a 599 PRINTS PR01042 Aspartyl-tRNA synthetase signature 524 538 3.1E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 syc0240_c 57a2d4e494866a4cf6ec9d069ef2e26a 599 PRINTS PR01042 Aspartyl-tRNA synthetase signature 214 227 3.1E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 syc0240_c 57a2d4e494866a4cf6ec9d069ef2e26a 599 PRINTS PR01042 Aspartyl-tRNA synthetase signature 480 496 3.1E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 syc0240_c 57a2d4e494866a4cf6ec9d069ef2e26a 599 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 588 7.0E-251 T 11-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 syc0240_c 57a2d4e494866a4cf6ec9d069ef2e26a 599 Gene3D G3DSA:3.30.1360.30 279 429 1.5E-186 T 11-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 syc0240_c 57a2d4e494866a4cf6ec9d069ef2e26a 599 SUPERFAMILY SSF55681 115 587 5.17E-107 T 11-10-2018 syc0240_c 57a2d4e494866a4cf6ec9d069ef2e26a 599 SUPERFAMILY SSF55261 296 429 2.45E-33 T 11-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 syc0240_c 57a2d4e494866a4cf6ec9d069ef2e26a 599 Pfam PF01336 OB-fold nucleic acid binding domain 18 103 6.6E-18 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 syc0240_c 57a2d4e494866a4cf6ec9d069ef2e26a 599 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 590 34.047 T 11-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 syc0240_c 57a2d4e494866a4cf6ec9d069ef2e26a 599 Gene3D G3DSA:2.40.50.140 1 106 4.9E-35 T 11-10-2018 syc0240_c 57a2d4e494866a4cf6ec9d069ef2e26a 599 Pfam PF02938 GAD domain 315 415 1.8E-22 T 11-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 syc0240_c 57a2d4e494866a4cf6ec9d069ef2e26a 599 SUPERFAMILY SSF50249 1 104 3.24E-32 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold syc0240_c 57a2d4e494866a4cf6ec9d069ef2e26a 599 Pfam PF00152 tRNA synthetases class II (D, K and N) 124 564 3.5E-111 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 syc0240_c 57a2d4e494866a4cf6ec9d069ef2e26a 599 Gene3D G3DSA:3.30.930.10 122 587 1.5E-186 T 11-10-2018 syc2235_c 74c6440d20be09ad8f841ed58680616e 917 Pfam PF00563 EAL domain 663 897 5.9E-75 T 11-10-2018 IPR001633 EAL domain syc2235_c 74c6440d20be09ad8f841ed58680616e 917 Gene3D G3DSA:3.30.450.20 363 484 1.9E-37 T 11-10-2018 syc2235_c 74c6440d20be09ad8f841ed58680616e 917 SMART SM00086 312 352 2.4E-4 T 11-10-2018 IPR001610 PAC motif syc2235_c 74c6440d20be09ad8f841ed58680616e 917 SMART SM00086 432 474 1.5E-9 T 11-10-2018 IPR001610 PAC motif syc2235_c 74c6440d20be09ad8f841ed58680616e 917 SMART SM00086 203 246 71.0 T 11-10-2018 IPR001610 PAC motif syc2235_c 74c6440d20be09ad8f841ed58680616e 917 SUPERFAMILY SSF55073 490 646 4.63E-46 T 11-10-2018 IPR029787 Nucleotide cyclase syc2235_c 74c6440d20be09ad8f841ed58680616e 917 SUPERFAMILY SSF55785 367 474 1.19E-30 T 11-10-2018 IPR035965 PAS domain superfamily syc2235_c 74c6440d20be09ad8f841ed58680616e 917 Gene3D G3DSA:3.30.450.20 310 362 7.2E-6 T 11-10-2018 syc2235_c 74c6440d20be09ad8f841ed58680616e 917 Gene3D G3DSA:3.30.450.20 251 309 2.1E-7 T 11-10-2018 syc2235_c 74c6440d20be09ad8f841ed58680616e 917 Pfam PF00989 PAS fold 259 303 5.5E-6 T 11-10-2018 IPR013767 PAS fold GO:0006355 syc2235_c 74c6440d20be09ad8f841ed58680616e 917 SUPERFAMILY SSF141868 661 907 2.09E-90 T 11-10-2018 IPR035919 EAL domain superfamily syc2235_c 74c6440d20be09ad8f841ed58680616e 917 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 319 359 1.6E-5 T 11-10-2018 IPR000014 PAS domain syc2235_c 74c6440d20be09ad8f841ed58680616e 917 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 357 479 2.7E-24 T 11-10-2018 IPR000014 PAS domain syc2235_c 74c6440d20be09ad8f841ed58680616e 917 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 254 302 1.1E-5 T 11-10-2018 IPR000014 PAS domain syc2235_c 74c6440d20be09ad8f841ed58680616e 917 Pfam PF13426 PAS domain 206 245 0.88 T 11-10-2018 IPR000014 PAS domain syc2235_c 74c6440d20be09ad8f841ed58680616e 917 Pfam PF13426 PAS domain 370 473 5.1E-18 T 11-10-2018 IPR000014 PAS domain syc2235_c 74c6440d20be09ad8f841ed58680616e 917 Gene3D G3DSA:3.20.20.450 660 915 4.8E-101 T 11-10-2018 IPR035919 EAL domain superfamily syc2235_c 74c6440d20be09ad8f841ed58680616e 917 SMART SM00052 656 902 1.2E-121 T 11-10-2018 IPR001633 EAL domain syc2235_c 74c6440d20be09ad8f841ed58680616e 917 Pfam PF00990 Diguanylate cyclase, GGDEF domain 485 641 7.3E-48 T 11-10-2018 IPR000160 GGDEF domain syc2235_c 74c6440d20be09ad8f841ed58680616e 917 SMART SM00267 474 646 1.3E-63 T 11-10-2018 IPR000160 GGDEF domain syc2235_c 74c6440d20be09ad8f841ed58680616e 917 Gene3D G3DSA:3.30.70.270 485 659 6.5E-58 T 11-10-2018 syc2235_c 74c6440d20be09ad8f841ed58680616e 917 SMART SM00091 258 329 1.7E-4 T 11-10-2018 IPR000014 PAS domain syc2235_c 74c6440d20be09ad8f841ed58680616e 917 SMART SM00091 360 426 8.5E-8 T 11-10-2018 IPR000014 PAS domain syc2235_c 74c6440d20be09ad8f841ed58680616e 917 SUPERFAMILY SSF55785 243 350 6.46E-16 T 11-10-2018 IPR035965 PAS domain superfamily syc2235_c 74c6440d20be09ad8f841ed58680616e 917 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 481 644 6.5E-41 T 11-10-2018 IPR000160 GGDEF domain syc1646_c 175b370d585fdd89ab60066aeabe142b 728 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 259 425 5.8E-31 T 11-10-2018 IPR004477 ComEC/Rec2-related protein syc1646_c 175b370d585fdd89ab60066aeabe142b 728 Pfam PF13567 Domain of unknown function (DUF4131) 30 198 3.2E-27 T 11-10-2018 IPR025405 Domain of unknown function DUF4131 syc1646_c 175b370d585fdd89ab60066aeabe142b 728 Pfam PF03772 Competence protein 249 499 1.0E-45 T 11-10-2018 IPR004477 ComEC/Rec2-related protein syc0381_d 976fb2a96f4de2f27a31cb895ef44f9e 589 PIRSF PIRSF002741 11 585 7.0E-84 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 syc0381_d 976fb2a96f4de2f27a31cb895ef44f9e 589 SUPERFAMILY SSF53850 34 580 2.53E-110 T 11-10-2018 syc0381_d 976fb2a96f4de2f27a31cb895ef44f9e 589 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 80 477 7.0E-82 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain syc0381_d 976fb2a96f4de2f27a31cb895ef44f9e 589 Gene3D G3DSA:3.40.190.10 27 296 1.1E-62 T 11-10-2018 syc0381_d 976fb2a96f4de2f27a31cb895ef44f9e 589 Gene3D G3DSA:3.10.105.10 319 553 8.1E-52 T 11-10-2018 syc2474_d 7879534544d142de9e18adcde646106a 450 Gene3D G3DSA:3.40.190.10 59 433 6.5E-124 T 11-10-2018 syc2474_d 7879534544d142de9e18adcde646106a 450 SUPERFAMILY SSF53850 57 303 1.74E-24 T 11-10-2018 syc2474_d 7879534544d142de9e18adcde646106a 450 Gene3D G3DSA:3.40.190.10 151 438 6.5E-124 T 11-10-2018 syc2474_d 7879534544d142de9e18adcde646106a 450 Pfam PF13379 NMT1-like family 55 312 2.6E-83 T 11-10-2018 syc1152_c b54760fc550931d2beba35b8172df55c 75 Pfam PF02672 CP12 domain 4 74 4.9E-28 T 11-10-2018 IPR003823 Domain of unknown function CP12 syc1152_c b54760fc550931d2beba35b8172df55c 75 SMART SM01093 4 75 2.3E-37 T 11-10-2018 IPR003823 Domain of unknown function CP12 syc0186_c 4c82dc4ec2c646bf225ee03abcaa1d8a 199 Gene3D G3DSA:1.10.8.420 3 54 1.7E-20 T 11-10-2018 syc0186_c 4c82dc4ec2c646bf225ee03abcaa1d8a 199 TIGRFAM TIGR00615 recR: recombination protein RecR 3 196 1.5E-82 T 11-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 syc0186_c 4c82dc4ec2c646bf225ee03abcaa1d8a 199 ProSitePatterns PS01300 RecR protein signature. 58 79 - T 11-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 syc0186_c 4c82dc4ec2c646bf225ee03abcaa1d8a 199 Pfam PF13662 Toprim domain 82 171 3.3E-23 T 11-10-2018 IPR006171 TOPRIM domain syc0186_c 4c82dc4ec2c646bf225ee03abcaa1d8a 199 Hamap MF_00017 Recombination protein RecR [recR]. 1 198 104.37 T 11-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 syc0186_c 4c82dc4ec2c646bf225ee03abcaa1d8a 199 Gene3D G3DSA:3.40.1360.10 78 198 6.4E-44 T 11-10-2018 syc0186_c 4c82dc4ec2c646bf225ee03abcaa1d8a 199 SMART SM00493 81 166 1.9E-10 T 11-10-2018 IPR006171 TOPRIM domain syc0186_c 4c82dc4ec2c646bf225ee03abcaa1d8a 199 Pfam PF02132 RecR protein 41 79 1.0E-16 T 11-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger syc0186_c 4c82dc4ec2c646bf225ee03abcaa1d8a 199 SUPERFAMILY SSF111304 4 198 3.01E-74 T 11-10-2018 IPR023627 Recombination protein RecR syc2360_d ac3a0efcf7600b0557c6c05c1742e8ca 161 Gene3D G3DSA:3.40.50.2020 4 160 2.4E-28 T 11-10-2018 syc2360_d ac3a0efcf7600b0557c6c05c1742e8ca 161 Pfam PF00156 Phosphoribosyl transferase domain 12 155 1.2E-22 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 syc2360_d ac3a0efcf7600b0557c6c05c1742e8ca 161 SUPERFAMILY SSF53271 6 156 1.8E-26 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like syc0445_d c1055b5d976a4e6fe2dd44d0498bd447 421 Pfam PF01098 Cell cycle protein 43 196 9.5E-29 T 11-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 syc0445_d c1055b5d976a4e6fe2dd44d0498bd447 421 Pfam PF01098 Cell cycle protein 244 416 2.0E-60 T 11-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 syc0445_d c1055b5d976a4e6fe2dd44d0498bd447 421 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 25 414 4.6E-113 T 11-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 syc0445_d c1055b5d976a4e6fe2dd44d0498bd447 421 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 19 419 25.742 T 11-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 syc2187_d a64b295a90823e0d330dc3c094e9f409 144 Pfam PF11210 Protein of unknown function (DUF2996) 25 141 3.8E-46 T 11-10-2018 IPR021374 Protein of unknown function DUF2996 syc1033_c fe7223fead3fa196739b70020f2b9f9f 411 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 21 406 1.1E-86 T 11-10-2018 syc1033_c fe7223fead3fa196739b70020f2b9f9f 411 SUPERFAMILY SSF51556 58 364 1.11E-66 T 11-10-2018 IPR032466 Metal-dependent hydrolase syc1033_c fe7223fead3fa196739b70020f2b9f9f 411 SUPERFAMILY SSF51338 5 407 2.64E-9 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 syc1033_c fe7223fead3fa196739b70020f2b9f9f 411 Gene3D G3DSA:3.20.20.140 57 365 7.6E-82 T 11-10-2018 syc1033_c fe7223fead3fa196739b70020f2b9f9f 411 Gene3D G3DSA:2.30.40.10 9 406 7.6E-82 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 syc0882_c 8303b75dda31362cc3909ef4aad6c746 754 SUPERFAMILY SSF55781 164 349 1.0E-34 T 11-10-2018 syc0882_c 8303b75dda31362cc3909ef4aad6c746 754 Gene3D G3DSA:3.30.565.10 450 611 1.1E-49 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily syc0882_c 8303b75dda31362cc3909ef4aad6c746 754 Pfam PF00512 His Kinase A (phospho-acceptor) domain 383 451 1.3E-22 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 syc0882_c 8303b75dda31362cc3909ef4aad6c746 754 SUPERFAMILY SSF55874 440 608 2.49E-49 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily syc0882_c 8303b75dda31362cc3909ef4aad6c746 754 SUPERFAMILY SSF47384 368 452 1.51E-23 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 syc0882_c 8303b75dda31362cc3909ef4aad6c746 754 SMART SM00387 499 611 9.7E-44 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase syc0882_c 8303b75dda31362cc3909ef4aad6c746 754 SMART SM00448 628 738 0.0027 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 syc0882_c 8303b75dda31362cc3909ef4aad6c746 754 Gene3D G3DSA:3.40.50.2300 627 745 8.3E-19 T 11-10-2018 syc0882_c 8303b75dda31362cc3909ef4aad6c746 754 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 500 610 4.8E-33 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase syc0882_c 8303b75dda31362cc3909ef4aad6c746 754 Pfam PF01590 GAF domain 184 343 3.5E-20 T 11-10-2018 IPR003018 GAF domain GO:0005515 syc0882_c 8303b75dda31362cc3909ef4aad6c746 754 SMART SM00388 383 451 1.3E-25 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 syc0882_c 8303b75dda31362cc3909ef4aad6c746 754 Gene3D G3DSA:1.10.287.130 352 449 1.9E-28 T 11-10-2018 syc0882_c 8303b75dda31362cc3909ef4aad6c746 754 SMART SM00065 184 353 1.2E-19 T 11-10-2018 IPR003018 GAF domain GO:0005515 syc0882_c 8303b75dda31362cc3909ef4aad6c746 754 Gene3D G3DSA:3.30.450.40 162 351 1.3E-38 T 11-10-2018 IPR029016 GAF-like domain superfamily syc0882_c 8303b75dda31362cc3909ef4aad6c746 754 PRINTS PR00344 Bacterial sensor protein C-terminal signature 571 589 2.2E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 syc0882_c 8303b75dda31362cc3909ef4aad6c746 754 PRINTS PR00344 Bacterial sensor protein C-terminal signature 554 564 2.2E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 syc0882_c 8303b75dda31362cc3909ef4aad6c746 754 PRINTS PR00344 Bacterial sensor protein C-terminal signature 595 608 2.2E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 syc0882_c 8303b75dda31362cc3909ef4aad6c746 754 PRINTS PR00344 Bacterial sensor protein C-terminal signature 536 550 2.2E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 syc0882_c 8303b75dda31362cc3909ef4aad6c746 754 SUPERFAMILY SSF52172 629 742 2.13E-14 T 11-10-2018 IPR011006 CheY-like superfamily syc1263_c 25fa681ce25d35594498d66266f28d77 155 Gene3D G3DSA:2.160.20.80 17 145 5.7E-30 T 11-10-2018 syc1263_c 25fa681ce25d35594498d66266f28d77 155 SUPERFAMILY SSF141571 31 138 1.83E-27 T 11-10-2018 syc1263_c 25fa681ce25d35594498d66266f28d77 155 Pfam PF00805 Pentapeptide repeats (8 copies) 64 102 1.3E-13 T 11-10-2018 IPR001646 Pentapeptide repeat syc1572_d 6f56ab1b0b00dc7bd61dac92a3581e14 228 SUPERFAMILY SSF52096 18 219 4.45E-54 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily syc1572_d 6f56ab1b0b00dc7bd61dac92a3581e14 228 PRINTS PR00127 Clp protease catalytic subunit P signature 114 131 3.0E-29 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 syc1572_d 6f56ab1b0b00dc7bd61dac92a3581e14 228 PRINTS PR00127 Clp protease catalytic subunit P signature 192 211 3.0E-29 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 syc1572_d 6f56ab1b0b00dc7bd61dac92a3581e14 228 PRINTS PR00127 Clp protease catalytic subunit P signature 74 94 3.0E-29 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 syc1572_d 6f56ab1b0b00dc7bd61dac92a3581e14 228 PRINTS PR00127 Clp protease catalytic subunit P signature 24 39 3.0E-29 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 syc1572_d 6f56ab1b0b00dc7bd61dac92a3581e14 228 PRINTS PR00127 Clp protease catalytic subunit P signature 135 154 3.0E-29 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 syc1572_d 6f56ab1b0b00dc7bd61dac92a3581e14 228 Pfam PF00574 Clp protease 29 216 4.3E-52 T 11-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA syc1572_d 6f56ab1b0b00dc7bd61dac92a3581e14 228 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 12 217 32.095 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 syc1572_d 6f56ab1b0b00dc7bd61dac92a3581e14 228 Gene3D G3DSA:3.90.226.10 4 219 1.9E-60 T 11-10-2018 syc0023_d a6527e3b8423955189215ffea156aa07 155 Gene3D G3DSA:1.10.3680.10 5 124 1.0E-8 T 11-10-2018 IPR029024 TerB-like syc0023_d a6527e3b8423955189215ffea156aa07 155 SUPERFAMILY SSF158682 11 116 5.75E-15 T 11-10-2018 IPR029024 TerB-like syc0398_d 6bf32954c67a57a9f0dd24ca79e53097 341 Gene3D G3DSA:2.40.40.10 240 333 1.9E-37 T 11-10-2018 IPR036908 RlpA-like domain superfamily syc0398_d 6bf32954c67a57a9f0dd24ca79e53097 341 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 242 335 3.0E-47 T 11-10-2018 IPR012997 Rare lipoprotein A syc0398_d 6bf32954c67a57a9f0dd24ca79e53097 341 SUPERFAMILY SSF50685 239 327 5.23E-13 T 11-10-2018 IPR036908 RlpA-like domain superfamily syc0398_d 6bf32954c67a57a9f0dd24ca79e53097 341 Pfam PF03330 Lytic transglycolase 240 328 1.8E-24 T 11-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain syc0398_d 6bf32954c67a57a9f0dd24ca79e53097 341 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 17 332 24.304 T 11-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 syc0660_d 824693d950342f2c7e35d1d97479fedf 185 Pfam PF09366 Protein of unknown function (DUF1997) 23 170 1.3E-42 T 11-10-2018 IPR018971 Protein of unknown function DUF1997 syc1797_c 30ae5096193fd950ec155d4e701cbd33 305 Hamap MF_00361 NAD kinase [nadK]. 2 291 29.873 T 11-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 syc1797_c 30ae5096193fd950ec155d4e701cbd33 305 Gene3D G3DSA:2.60.200.30 133 268 1.5E-72 T 11-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 syc1797_c 30ae5096193fd950ec155d4e701cbd33 305 Pfam PF01513 ATP-NAD kinase 4 276 2.0E-66 T 11-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 syc1797_c 30ae5096193fd950ec155d4e701cbd33 305 SUPERFAMILY SSF111331 3 296 1.05E-84 T 11-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily syc1797_c 30ae5096193fd950ec155d4e701cbd33 305 Gene3D G3DSA:3.40.50.10330 67 291 1.5E-72 T 11-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 syc0573_c 568bd4f16b28d713fadcab16cb3d2819 523 SUPERFAMILY SSF51905 1 502 6.8E-62 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc0573_c 568bd4f16b28d713fadcab16cb3d2819 523 Gene3D G3DSA:3.50.50.60 229 481 7.5E-14 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc0573_c 568bd4f16b28d713fadcab16cb3d2819 523 Gene3D G3DSA:3.50.50.60 7 89 3.8E-22 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc0573_c 568bd4f16b28d713fadcab16cb3d2819 523 TIGRFAM TIGR02733 desat_CrtD: C-3',4' desaturase CrtD 7 503 1.2E-250 T 11-10-2018 IPR014104 Myxoxanthophyll biosynthesis, C-3',4' desaturase CrtD syc0573_c 568bd4f16b28d713fadcab16cb3d2819 523 Gene3D G3DSA:3.90.660.50 207 440 7.5E-14 T 11-10-2018 syc0573_c 568bd4f16b28d713fadcab16cb3d2819 523 Pfam PF01593 Flavin containing amine oxidoreductase 15 398 1.8E-17 T 11-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 syc0573_c 568bd4f16b28d713fadcab16cb3d2819 523 PRINTS PR00419 Adrenodoxin reductase family signature 30 43 8.2E-5 T 11-10-2018 syc0573_c 568bd4f16b28d713fadcab16cb3d2819 523 PRINTS PR00419 Adrenodoxin reductase family signature 7 29 8.2E-5 T 11-10-2018 syc0920_c ff7f1403a9e258ed529f2d032c9121d9 189 PIRSF PIRSF001461 1 189 2.1E-80 T 11-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 syc0920_c ff7f1403a9e258ed529f2d032c9121d9 189 Pfam PF00834 Ribulose-phosphate 3 epimerase family 1 166 1.7E-74 T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 syc0920_c ff7f1403a9e258ed529f2d032c9121d9 189 Gene3D G3DSA:3.20.20.70 1 188 2.0E-73 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 syc0920_c ff7f1403a9e258ed529f2d032c9121d9 189 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 1 179 7.6E-77 T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 syc0920_c ff7f1403a9e258ed529f2d032c9121d9 189 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 99 121 - T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 syc0920_c ff7f1403a9e258ed529f2d032c9121d9 189 SUPERFAMILY SSF51366 1 182 3.93E-63 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 syc1846_d ce6e4f9db828a86f6b61d9a61abfa7d2 1053 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 690 702 - T 11-10-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 syc1846_d ce6e4f9db828a86f6b61d9a61abfa7d2 1053 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 66 1053 19.078 T 11-10-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 syc1846_d ce6e4f9db828a86f6b61d9a61abfa7d2 1053 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 242 253 - T 11-10-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 syc1846_d ce6e4f9db828a86f6b61d9a61abfa7d2 1053 Pfam PF00311 Phosphoenolpyruvate carboxylase 237 1053 0.0 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 syc1846_d ce6e4f9db828a86f6b61d9a61abfa7d2 1053 SUPERFAMILY SSF51621 81 1053 5.65E-298 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 syc1846_d ce6e4f9db828a86f6b61d9a61abfa7d2 1053 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 241 254 7.5E-66 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 syc1846_d ce6e4f9db828a86f6b61d9a61abfa7d2 1053 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 359 374 7.5E-66 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 syc1846_d ce6e4f9db828a86f6b61d9a61abfa7d2 1053 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 730 759 7.5E-66 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 syc1846_d ce6e4f9db828a86f6b61d9a61abfa7d2 1053 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 688 708 7.5E-66 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 syc1846_d ce6e4f9db828a86f6b61d9a61abfa7d2 1053 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 864 890 7.5E-66 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 syc1846_d ce6e4f9db828a86f6b61d9a61abfa7d2 1053 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 300 316 7.5E-66 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 syc1846_d ce6e4f9db828a86f6b61d9a61abfa7d2 1053 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 523 543 7.5E-66 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 syc1846_d ce6e4f9db828a86f6b61d9a61abfa7d2 1053 Gene3D G3DSA:1.20.1440.90 389 526 3.4E-7 T 11-10-2018 syc1604_d 37c1019554b7a9f46a6ad71023bf085b 414 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 239 401 5.2E-25 T 11-10-2018 IPR031475 Four-carbon acid sugar kinase, C-terminal domain syc1604_d 37c1019554b7a9f46a6ad71023bf085b 414 Pfam PF07005 Putative sugar-binding N-terminal domain 6 215 7.1E-44 T 11-10-2018 IPR010737 Four-carbon acid sugar kinase, N-terminal domain syc1604_d 37c1019554b7a9f46a6ad71023bf085b 414 Gene3D G3DSA:3.40.980.20 228 412 5.0E-9 T 11-10-2018 syc1604_d 37c1019554b7a9f46a6ad71023bf085b 414 Gene3D G3DSA:3.40.50.10840 11 218 1.9E-25 T 11-10-2018 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily syc1604_d 37c1019554b7a9f46a6ad71023bf085b 414 SUPERFAMILY SSF142764 4 410 6.41E-77 T 11-10-2018 syc1291_c 216a451c9a10e9a9017c798411456ddb 345 Gene3D G3DSA:3.30.420.40 5 334 1.4E-107 T 11-10-2018 syc1291_c 216a451c9a10e9a9017c798411456ddb 345 SUPERFAMILY SSF53067 1 341 1.91E-47 T 11-10-2018 syc1291_c 216a451c9a10e9a9017c798411456ddb 345 Pfam PF02685 Glucokinase 5 339 1.4E-113 T 11-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 syc1291_c 216a451c9a10e9a9017c798411456ddb 345 Gene3D G3DSA:3.40.367.20 106 324 1.4E-107 T 11-10-2018 syc1291_c 216a451c9a10e9a9017c798411456ddb 345 Hamap MF_00524 Glucokinase [glk]. 3 341 32.505 T 11-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 syc1291_c 216a451c9a10e9a9017c798411456ddb 345 TIGRFAM TIGR00749 glk: glucokinase 5 335 3.8E-101 T 11-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 syc0132_c 83cdf6d736b029af637be06a52cee22f 161 SUPERFAMILY SSF51161 13 119 6.52E-14 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily syc0132_c 83cdf6d736b029af637be06a52cee22f 161 Gene3D G3DSA:2.160.10.10 10 151 3.4E-15 T 11-10-2018 syc1308_d f0500ddca8df2dfb20624faa0199da08 368 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 9 354 3.5E-123 T 11-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 syc1308_d f0500ddca8df2dfb20624faa0199da08 368 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 148 357 9.9E-64 T 11-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 syc1308_d f0500ddca8df2dfb20624faa0199da08 368 SUPERFAMILY SSF53927 5 145 7.1E-46 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 syc1308_d f0500ddca8df2dfb20624faa0199da08 368 Gene3D G3DSA:3.40.430.10 138 358 2.3E-65 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 syc1308_d f0500ddca8df2dfb20624faa0199da08 368 PIRSF PIRSF006769 1 361 2.7E-126 T 11-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 syc1308_d f0500ddca8df2dfb20624faa0199da08 368 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 4 102 2.0E-20 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain syc1308_d f0500ddca8df2dfb20624faa0199da08 368 Gene3D G3DSA:3.40.140.10 1 137 4.6E-45 T 11-10-2018 syc1308_d f0500ddca8df2dfb20624faa0199da08 368 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 52 90 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 syc1308_d f0500ddca8df2dfb20624faa0199da08 368 Pfam PF01872 RibD C-terminal domain 149 353 1.1E-49 T 11-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 syc1308_d f0500ddca8df2dfb20624faa0199da08 368 SUPERFAMILY SSF53597 148 357 7.41E-59 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 syc0137_c e080bb00aab835d4edba41c2ae022ec4 286 PRINTS PR00091 Nitrogenase component II signature 121 136 1.9E-32 T 11-10-2018 syc0137_c e080bb00aab835d4edba41c2ae022ec4 286 PRINTS PR00091 Nitrogenase component II signature 28 43 1.9E-32 T 11-10-2018 syc0137_c e080bb00aab835d4edba41c2ae022ec4 286 PRINTS PR00091 Nitrogenase component II signature 6 19 1.9E-32 T 11-10-2018 syc0137_c e080bb00aab835d4edba41c2ae022ec4 286 PRINTS PR00091 Nitrogenase component II signature 83 97 1.9E-32 T 11-10-2018 syc0137_c e080bb00aab835d4edba41c2ae022ec4 286 Gene3D G3DSA:3.40.50.300 2 267 9.6E-66 T 11-10-2018 syc0137_c e080bb00aab835d4edba41c2ae022ec4 286 TIGRFAM TIGR01281 DPOR_bchL: light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein 2 267 1.1E-148 T 11-10-2018 IPR005971 Light-independent protochlorophyllide reductase, iron-sulphur ATP-binding protein GO:0005524|GO:0015995|GO:0016730|GO:0019685|GO:0055114 KEGG: 00860+1.3.7.7|MetaCyc: PWY-5531|MetaCyc: PWY-7159 syc0137_c e080bb00aab835d4edba41c2ae022ec4 286 ProSitePatterns PS00692 NifH/frxC family signature 2. 122 135 - T 11-10-2018 IPR030655 NifH/chlL conserved site syc0137_c e080bb00aab835d4edba41c2ae022ec4 286 Hamap MF_00355 Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein [bchL]. 1 267 58.263 T 11-10-2018 IPR005971 Light-independent protochlorophyllide reductase, iron-sulphur ATP-binding protein GO:0005524|GO:0015995|GO:0016730|GO:0019685|GO:0055114 KEGG: 00860+1.3.7.7|MetaCyc: PWY-5531|MetaCyc: PWY-7159 syc0137_c e080bb00aab835d4edba41c2ae022ec4 286 PIRSF PIRSF000363 1 272 3.4E-99 T 11-10-2018 IPR000392 NifH/frxC family GO:0005524|GO:0016491|GO:0055114 syc0137_c e080bb00aab835d4edba41c2ae022ec4 286 SUPERFAMILY SSF52540 3 269 2.97E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0137_c e080bb00aab835d4edba41c2ae022ec4 286 Pfam PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family 2 269 6.5E-107 T 11-10-2018 IPR000392 NifH/frxC family GO:0005524|GO:0016491|GO:0055114 syc0137_c e080bb00aab835d4edba41c2ae022ec4 286 ProSitePatterns PS00746 NifH/frxC family signature 1. 85 97 - T 11-10-2018 IPR030655 NifH/chlL conserved site syc2153_c dec5db48b50e087372eedb2ad6985ad7 255 SUPERFAMILY SSF53335 9 178 8.58E-15 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase syc2153_c dec5db48b50e087372eedb2ad6985ad7 255 Gene3D G3DSA:3.40.50.150 1 210 1.7E-40 T 11-10-2018 syc2153_c dec5db48b50e087372eedb2ad6985ad7 255 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 86 171 2.8E-25 T 11-10-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 MetaCyc: PWY-7892 syc0409_d 8e84e796869bc76b7051e1c231c21d93 228 SUPERFAMILY SSF158682 6 120 4.45E-19 T 11-10-2018 IPR029024 TerB-like syc0409_d 8e84e796869bc76b7051e1c231c21d93 228 Gene3D G3DSA:1.10.3680.10 1 127 1.7E-10 T 11-10-2018 IPR029024 TerB-like syc0409_d 8e84e796869bc76b7051e1c231c21d93 228 Pfam PF06967 Mo-dependent nitrogenase C-terminus 134 216 2.4E-42 T 11-10-2018 IPR009717 Mo-dependent nitrogenase, C-terminal syc0409_d 8e84e796869bc76b7051e1c231c21d93 228 Pfam PF05099 Tellurite resistance protein TerB 63 108 2.9E-5 T 11-10-2018 IPR007791 Co-chaperone DjlA, N-terminal syc1289_d f3e5f9c22d1f8183decefa1fc4519a54 46 ProDom PD005510 PHOTOSYSTEM II CHLOROPLAST N SUBUNIT REACTION PLASTID CENTER MEMBRANE PHOTOSYNTHESIS 10 46 1.0E-14 T 11-10-2018 IPR003398 Photosystem II PsbN GO:0009523|GO:0009539|GO:0015979|GO:0016020 syc1289_d f3e5f9c22d1f8183decefa1fc4519a54 46 Pfam PF02468 Photosystem II reaction centre N protein (psbN) 5 46 2.4E-24 T 11-10-2018 IPR003398 Photosystem II PsbN GO:0009523|GO:0009539|GO:0015979|GO:0016020 syc1289_d f3e5f9c22d1f8183decefa1fc4519a54 46 Hamap MF_00293 Protein PsbN [psbN]. 2 46 19.085 T 11-10-2018 IPR003398 Photosystem II PsbN GO:0009523|GO:0009539|GO:0015979|GO:0016020 syc1591_d dd21a736e1af7df13c8370a449b2b410 755 Pfam PF13361 UvrD-like helicase C-terminal domain 588 722 2.6E-17 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 syc1591_d dd21a736e1af7df13c8370a449b2b410 755 SUPERFAMILY SSF52540 11 726 2.84E-75 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc1591_d dd21a736e1af7df13c8370a449b2b410 755 Gene3D G3DSA:3.40.50.300 217 353 4.9E-20 T 11-10-2018 syc1591_d dd21a736e1af7df13c8370a449b2b410 755 Pfam PF00580 UvrD/REP helicase N-terminal domain 22 323 7.4E-24 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 syc1591_d dd21a736e1af7df13c8370a449b2b410 755 Gene3D G3DSA:3.40.50.300 10 160 9.0E-15 T 11-10-2018 syc1679_c 8752bf304465402a70ea5a3d65bb72ef 280 SUPERFAMILY SSF52821 2 155 7.86E-42 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily syc1679_c 8752bf304465402a70ea5a3d65bb72ef 280 SMART SM00450 156 273 8.4E-9 T 11-10-2018 IPR001763 Rhodanese-like domain syc1679_c 8752bf304465402a70ea5a3d65bb72ef 280 SMART SM00450 6 134 2.7E-22 T 11-10-2018 IPR001763 Rhodanese-like domain syc1679_c 8752bf304465402a70ea5a3d65bb72ef 280 SUPERFAMILY SSF52821 166 279 1.44E-24 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily syc1679_c 8752bf304465402a70ea5a3d65bb72ef 280 Pfam PF00581 Rhodanese-like domain 167 269 2.5E-7 T 11-10-2018 IPR001763 Rhodanese-like domain syc1679_c 8752bf304465402a70ea5a3d65bb72ef 280 Pfam PF00581 Rhodanese-like domain 7 130 2.3E-17 T 11-10-2018 IPR001763 Rhodanese-like domain syc1679_c 8752bf304465402a70ea5a3d65bb72ef 280 Gene3D G3DSA:3.40.250.10 1 153 5.5E-47 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily syc1679_c 8752bf304465402a70ea5a3d65bb72ef 280 ProSitePatterns PS00380 Rhodanese signature 1. 39 50 - T 11-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 syc1679_c 8752bf304465402a70ea5a3d65bb72ef 280 Gene3D G3DSA:3.40.250.10 162 280 3.1E-24 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily syc1016_d dce95517cbd97651e1cabef38a9082c3 438 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 156 5.3E-46 T 11-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 syc1016_d dce95517cbd97651e1cabef38a9082c3 438 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 330 430 6.4E-29 T 11-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 syc1016_d dce95517cbd97651e1cabef38a9082c3 438 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 428 29.336 T 11-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 syc1016_d dce95517cbd97651e1cabef38a9082c3 438 SUPERFAMILY SSF69075 328 431 2.22E-30 T 11-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 syc1016_d dce95517cbd97651e1cabef38a9082c3 438 Gene3D G3DSA:3.30.460.30 2 158 1.7E-57 T 11-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 syc1016_d dce95517cbd97651e1cabef38a9082c3 438 PIRSF PIRSF000445 1 438 3.1E-147 T 11-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 syc1016_d dce95517cbd97651e1cabef38a9082c3 438 SUPERFAMILY SSF69742 1 158 2.48E-47 T 11-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 syc1016_d dce95517cbd97651e1cabef38a9082c3 438 Gene3D G3DSA:3.40.50.720 161 323 6.4E-39 T 11-10-2018 syc1016_d dce95517cbd97651e1cabef38a9082c3 438 SUPERFAMILY SSF51735 161 325 9.49E-29 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily syc1016_d dce95517cbd97651e1cabef38a9082c3 438 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 186 316 4.8E-40 T 11-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase syc1016_d dce95517cbd97651e1cabef38a9082c3 438 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 99 122 - T 11-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 syc1016_d dce95517cbd97651e1cabef38a9082c3 438 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 431 8.7E-144 T 11-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 syc1411_c 157a71050d5f637fa83c96ac3af499d5 177 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 3 166 8.8E-40 T 11-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 syc1411_c 157a71050d5f637fa83c96ac3af499d5 177 Gene3D G3DSA:3.40.50.300 1 175 5.7E-53 T 11-10-2018 syc1411_c 157a71050d5f637fa83c96ac3af499d5 177 Hamap MF_00165 Thymidylate kinase [tmk]. 1 175 20.31 T 11-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 syc1411_c 157a71050d5f637fa83c96ac3af499d5 177 Pfam PF02223 Thymidylate kinase 2 167 6.0E-37 T 11-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 syc1411_c 157a71050d5f637fa83c96ac3af499d5 177 ProSitePatterns PS01331 Thymidylate kinase signature. 63 75 - T 11-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 syc1411_c 157a71050d5f637fa83c96ac3af499d5 177 SUPERFAMILY SSF52540 3 174 8.81E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc1143_c 0d71391c4e85a6799af50c3cd7566398 434 Gene3D G3DSA:3.40.640.10 4 293 1.5E-96 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 syc1143_c 0d71391c4e85a6799af50c3cd7566398 434 SUPERFAMILY SSF53383 4 428 1.33E-126 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase syc1143_c 0d71391c4e85a6799af50c3cd7566398 434 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 429 3.7E-136 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 syc1143_c 0d71391c4e85a6799af50c3cd7566398 434 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 4 429 1.0E-196 T 11-10-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 syc1143_c 0d71391c4e85a6799af50c3cd7566398 434 Gene3D G3DSA:3.90.1150.10 297 434 5.0E-52 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 syc1143_c 0d71391c4e85a6799af50c3cd7566398 434 PIRSF PIRSF001434 1 432 4.2E-124 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 syc2220_d b209363a3b62945ffb25725fdc2539aa 156 Pfam PF00588 SpoU rRNA Methylase family 3 142 2.3E-34 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 syc2220_d b209363a3b62945ffb25725fdc2539aa 156 SUPERFAMILY SSF75217 4 152 1.96E-43 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases syc2220_d b209363a3b62945ffb25725fdc2539aa 156 Gene3D G3DSA:3.40.1280.10 1 154 3.6E-61 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal syc2220_d b209363a3b62945ffb25725fdc2539aa 156 PIRSF PIRSF029256 1 154 1.2E-61 T 11-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 syc2220_d b209363a3b62945ffb25725fdc2539aa 156 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 152 33.733 T 11-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 syc1868_d 032f434c9791a3f88067a1f38e58abdd 287 Gene3D G3DSA:4.10.950.10 196 276 2.5E-34 T 11-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc1868_d 032f434c9791a3f88067a1f38e58abdd 287 SUPERFAMILY SSF50249 3 124 3.29E-47 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold syc1868_d 032f434c9791a3f88067a1f38e58abdd 287 Gene3D G3DSA:2.30.30.30 118 195 1.3E-32 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 syc1868_d 032f434c9791a3f88067a1f38e58abdd 287 PIRSF PIRSF002158 9 277 5.9E-96 T 11-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc1868_d 032f434c9791a3f88067a1f38e58abdd 287 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 126 251 4.9E-55 T 11-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 syc1868_d 032f434c9791a3f88067a1f38e58abdd 287 SMART SM01383 42 118 4.9E-41 T 11-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc1868_d 032f434c9791a3f88067a1f38e58abdd 287 SUPERFAMILY SSF50104 126 273 8.42E-60 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily syc1868_d 032f434c9791a3f88067a1f38e58abdd 287 Gene3D G3DSA:2.40.50.140 1 114 2.3E-43 T 11-10-2018 syc1868_d 032f434c9791a3f88067a1f38e58abdd 287 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 275 4.3E-133 T 11-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 syc1868_d 032f434c9791a3f88067a1f38e58abdd 287 SMART SM01382 124 253 2.3E-87 T 11-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 syc1868_d 032f434c9791a3f88067a1f38e58abdd 287 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 275 48.75 T 11-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 syc1868_d 032f434c9791a3f88067a1f38e58abdd 287 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 6.3E-31 T 11-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc1868_d 032f434c9791a3f88067a1f38e58abdd 287 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 11-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc1543_c 2a77e8b49d91425a4fadefd613b14f3d 327 Gene3D G3DSA:3.90.650.10 149 325 5.0E-39 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily syc1543_c 2a77e8b49d91425a4fadefd613b14f3d 327 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 8 324 2.5E-102 T 11-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 syc1543_c 2a77e8b49d91425a4fadefd613b14f3d 327 SUPERFAMILY SSF56042 145 307 6.88E-29 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily syc1543_c 2a77e8b49d91425a4fadefd613b14f3d 327 PIRSF PIRSF005303 4 324 1.6E-94 T 11-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 syc1543_c 2a77e8b49d91425a4fadefd613b14f3d 327 Gene3D G3DSA:3.30.1330.10 4 143 1.8E-42 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily syc1543_c 2a77e8b49d91425a4fadefd613b14f3d 327 SUPERFAMILY SSF55326 6 141 7.63E-35 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily syc1543_c 2a77e8b49d91425a4fadefd613b14f3d 327 Pfam PF02769 AIR synthase related protein, C-terminal domain 153 306 1.9E-14 T 11-10-2018 IPR010918 PurM-like, C-terminal domain syc1543_c 2a77e8b49d91425a4fadefd613b14f3d 327 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 9 324 27.552 T 11-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 syc1543_c 2a77e8b49d91425a4fadefd613b14f3d 327 Pfam PF00586 AIR synthase related protein, N-terminal domain 29 141 4.3E-26 T 11-10-2018 IPR016188 PurM-like, N-terminal domain syc2476_d 44e30db7752c33f0aec5d93f17e07946 663 SUPERFAMILY SSF52540 5 226 5.05E-69 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc2476_d 44e30db7752c33f0aec5d93f17e07946 663 Gene3D G3DSA:3.40.190.10 281 629 4.7E-118 T 11-10-2018 syc2476_d 44e30db7752c33f0aec5d93f17e07946 663 TIGRFAM TIGR01184 ntrCD: nitrate ABC transporter, ATP-binding proteins C and D 25 254 2.7E-130 T 11-10-2018 IPR005890 Nitrate transport ATP-binding subunit C/D GO:0015112|GO:0015706|GO:0016020 syc2476_d 44e30db7752c33f0aec5d93f17e07946 663 Gene3D G3DSA:3.40.190.10 369 634 4.7E-118 T 11-10-2018 syc2476_d 44e30db7752c33f0aec5d93f17e07946 663 Gene3D G3DSA:3.40.50.300 2 274 9.0E-64 T 11-10-2018 syc2476_d 44e30db7752c33f0aec5d93f17e07946 663 SMART SM00382 34 216 1.5E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain syc2476_d 44e30db7752c33f0aec5d93f17e07946 663 SUPERFAMILY SSF53850 278 514 1.17E-30 T 11-10-2018 syc2476_d 44e30db7752c33f0aec5d93f17e07946 663 Pfam PF13379 NMT1-like family 277 525 9.5E-80 T 11-10-2018 syc2476_d 44e30db7752c33f0aec5d93f17e07946 663 Pfam PF00005 ABC transporter 25 166 1.6E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 syc2476_d 44e30db7752c33f0aec5d93f17e07946 663 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 syc0488_c 6b97e8dcc12b6c6978a5ee88792123f9 675 SUPERFAMILY SSF53335 99 673 9.78E-123 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase syc0488_c 6b97e8dcc12b6c6978a5ee88792123f9 675 Pfam PF12161 HsdM N-terminal domain 101 233 1.7E-21 T 11-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain syc0488_c 6b97e8dcc12b6c6978a5ee88792123f9 675 Gene3D G3DSA:3.40.50.150 247 561 8.4E-92 T 11-10-2018 syc0488_c 6b97e8dcc12b6c6978a5ee88792123f9 675 Pfam PF02384 N-6 DNA Methylase 247 546 2.4E-58 T 11-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 syc0488_c 6b97e8dcc12b6c6978a5ee88792123f9 675 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 376 382 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 syc0488_c 6b97e8dcc12b6c6978a5ee88792123f9 675 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 301 315 1.5E-10 T 11-10-2018 syc0488_c 6b97e8dcc12b6c6978a5ee88792123f9 675 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 373 385 1.5E-10 T 11-10-2018 syc0488_c 6b97e8dcc12b6c6978a5ee88792123f9 675 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 268 284 1.5E-10 T 11-10-2018 syc0113_c 95feaaae912554885a8b20c8b128f2b3 357 SUPERFAMILY SSF51569 3 329 4.1E-104 T 11-10-2018 syc0113_c 95feaaae912554885a8b20c8b128f2b3 357 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 139 150 - T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 syc0113_c 95feaaae912554885a8b20c8b128f2b3 357 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 72 85 - T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 syc0113_c 95feaaae912554885a8b20c8b128f2b3 357 TIGRFAM TIGR01521 FruBisAldo_II_B: fructose-bisphosphate aldolase, class II, Calvin cycle subtype 3 349 1.7E-204 T 11-10-2018 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 syc0113_c 95feaaae912554885a8b20c8b128f2b3 357 Gene3D G3DSA:3.20.20.70 1 354 1.6E-142 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 syc0113_c 95feaaae912554885a8b20c8b128f2b3 357 Pfam PF01116 Fructose-bisphosphate aldolase class-II 6 328 6.5E-93 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 syc0113_c 95feaaae912554885a8b20c8b128f2b3 357 PIRSF PIRSF001359 1 329 2.0E-83 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 syc0113_c 95feaaae912554885a8b20c8b128f2b3 357 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 329 8.9E-106 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 syc1103_c b0cce5de8dea5ea5247aa601e0887c11 390 Pfam PF01837 Homocysteine biosynthesis enzyme, sulfur-incorporation 16 363 4.2E-139 T 11-10-2018 IPR002708 Homocysteine biosynthesis enzyme, sulfur-incorporation syc1103_c b0cce5de8dea5ea5247aa601e0887c11 390 ProDom PD011569 METAL-BINDING IRON IRON-SULFUR 4FE-4S FERREDOXIN OXIDOREDUCTASE DOMAIN ELECTRON METHANOGENESIS A 14 320 7.0E-170 T 11-10-2018 IPR002708 Homocysteine biosynthesis enzyme, sulfur-incorporation syc0991_c f620d908689961f304313868a2f60a09 317 SUPERFAMILY SSF46548 130 252 6.8E-17 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 syc0991_c f620d908689961f304313868a2f60a09 317 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 9 307 9.5E-102 T 11-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 syc0991_c f620d908689961f304313868a2f60a09 317 Pfam PF13484 4Fe-4S double cluster binding domain 183 248 5.4E-20 T 11-10-2018 syc0991_c f620d908689961f304313868a2f60a09 317 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 2 308 49.328 T 11-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 syc0991_c f620d908689961f304313868a2f60a09 317 Pfam PF08331 Domain of unknown function (DUF1730) 57 131 4.4E-26 T 11-10-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 syc0991_c f620d908689961f304313868a2f60a09 317 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 184 195 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site syc1032_d 3e5919ae873017eb6ddf7ec235ecf0bd 220 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 102 114 3.3E-21 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 syc1032_d 3e5919ae873017eb6ddf7ec235ecf0bd 220 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 45 61 3.3E-21 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 syc1032_d 3e5919ae873017eb6ddf7ec235ecf0bd 220 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 146 165 3.3E-21 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 syc1032_d 3e5919ae873017eb6ddf7ec235ecf0bd 220 ProSitePatterns PS00501 Signal peptidases I serine active site. 54 61 - T 11-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 syc1032_d 3e5919ae873017eb6ddf7ec235ecf0bd 220 Pfam PF00717 Peptidase S24-like 51 126 1.1E-18 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C syc1032_d 3e5919ae873017eb6ddf7ec235ecf0bd 220 ProSitePatterns PS00760 Signal peptidases I lysine active site. 104 116 - T 11-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 syc1032_d 3e5919ae873017eb6ddf7ec235ecf0bd 220 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 30 187 3.2E-49 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 syc1032_d 3e5919ae873017eb6ddf7ec235ecf0bd 220 ProSitePatterns PS00761 Signal peptidases I signature 3. 151 164 - T 11-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 syc1032_d 3e5919ae873017eb6ddf7ec235ecf0bd 220 Gene3D G3DSA:2.10.109.10 76 193 2.1E-38 T 11-10-2018 syc1032_d 3e5919ae873017eb6ddf7ec235ecf0bd 220 SUPERFAMILY SSF51306 43 192 3.4E-59 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily syc0472_c 54cc5ced35bcb8af290a53b5b479142b 123 Pfam PF11267 Domain of unknown function (DUF3067) 25 120 8.7E-39 T 11-10-2018 IPR021420 Protein of unknown function DUF3067 syc0472_c 54cc5ced35bcb8af290a53b5b479142b 123 Gene3D G3DSA:3.30.428.40 21 122 9.4E-40 T 11-10-2018 syc0549_c cee5ed1ab0e0803a9b015826f7837e8a 112 Pfam PF04483 Protein of unknown function (DUF565) 51 112 1.9E-16 T 11-10-2018 IPR007572 Uncharacterised protein family Ycf20 syc0267_c 24870ecb09c14e9a69d914f90751c137 411 Gene3D G3DSA:2.170.190.11 55 152 1.0E-104 T 11-10-2018 syc0267_c 24870ecb09c14e9a69d914f90751c137 411 SMART SM00852 191 333 3.7E-34 T 11-10-2018 IPR001453 MoaB/Mog domain syc0267_c 24870ecb09c14e9a69d914f90751c137 411 SUPERFAMILY SSF63867 342 409 6.93E-9 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 syc0267_c 24870ecb09c14e9a69d914f90751c137 411 Pfam PF00994 Probable molybdopterin binding domain 192 331 1.8E-27 T 11-10-2018 IPR001453 MoaB/Mog domain syc0267_c 24870ecb09c14e9a69d914f90751c137 411 Pfam PF03453 MoeA N-terminal region (domain I and II) 12 178 5.4E-41 T 11-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 syc0267_c 24870ecb09c14e9a69d914f90751c137 411 SUPERFAMILY SSF63882 10 187 3.66E-49 T 11-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 syc0267_c 24870ecb09c14e9a69d914f90751c137 411 Pfam PF03454 MoeA C-terminal region (domain IV) 344 410 1.2E-14 T 11-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 syc0267_c 24870ecb09c14e9a69d914f90751c137 411 SUPERFAMILY SSF53218 190 337 7.72E-32 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily syc0267_c 24870ecb09c14e9a69d914f90751c137 411 Gene3D G3DSA:2.40.340.10 342 406 1.0E-104 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 syc0267_c 24870ecb09c14e9a69d914f90751c137 411 Gene3D G3DSA:3.90.105.10 32 185 1.0E-104 T 11-10-2018 syc0267_c 24870ecb09c14e9a69d914f90751c137 411 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 266 300 - T 11-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 syc0267_c 24870ecb09c14e9a69d914f90751c137 411 Gene3D G3DSA:3.40.980.10 186 341 1.0E-104 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily syc1397_d c2daa146bf46340826af31baa16cece1 472 SUPERFAMILY SSF52540 42 234 3.84E-32 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc1397_d c2daa146bf46340826af31baa16cece1 472 Pfam PF01926 50S ribosome-binding GTPase 72 196 3.7E-18 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 syc1397_d c2daa146bf46340826af31baa16cece1 472 Gene3D G3DSA:3.40.50.300 19 283 2.4E-36 T 11-10-2018 syc1397_d c2daa146bf46340826af31baa16cece1 472 Pfam PF05128 Domain of unknown function (DUF697) 283 450 1.5E-35 T 11-10-2018 IPR021147 Protein of unknown function DUF697 syc1397_d c2daa146bf46340826af31baa16cece1 472 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 71 214 6.0E-14 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 syc0004_d 2dcd08df81f4829460071adbb31604e3 151 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 2 133 10.158 T 11-10-2018 IPR022907 VapC family GO:0004540 syc0004_d 2dcd08df81f4829460071adbb31604e3 151 SUPERFAMILY SSF88723 2 139 1.21E-28 T 11-10-2018 IPR029060 PIN-like domain superfamily syc0004_d 2dcd08df81f4829460071adbb31604e3 151 Gene3D G3DSA:3.40.50.1010 1 140 3.8E-38 T 11-10-2018 syc0004_d 2dcd08df81f4829460071adbb31604e3 151 Pfam PF01850 PIN domain 3 130 6.4E-16 T 11-10-2018 IPR002716 PIN domain syc1693_d 3621c353ad83da6ccd29749c8a64899a 273 SUPERFAMILY SSF117892 52 184 1.44E-37 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily syc1693_d 3621c353ad83da6ccd29749c8a64899a 273 PRINTS PR00721 Stomatin signature 153 171 8.6E-58 T 11-10-2018 IPR001972 Stomatin family GO:0016020 syc1693_d 3621c353ad83da6ccd29749c8a64899a 273 PRINTS PR00721 Stomatin signature 109 126 8.6E-58 T 11-10-2018 IPR001972 Stomatin family GO:0016020 syc1693_d 3621c353ad83da6ccd29749c8a64899a 273 PRINTS PR00721 Stomatin signature 129 152 8.6E-58 T 11-10-2018 IPR001972 Stomatin family GO:0016020 syc1693_d 3621c353ad83da6ccd29749c8a64899a 273 PRINTS PR00721 Stomatin signature 172 193 8.6E-58 T 11-10-2018 IPR001972 Stomatin family GO:0016020 syc1693_d 3621c353ad83da6ccd29749c8a64899a 273 PRINTS PR00721 Stomatin signature 27 49 8.6E-58 T 11-10-2018 IPR001972 Stomatin family GO:0016020 syc1693_d 3621c353ad83da6ccd29749c8a64899a 273 PRINTS PR00721 Stomatin signature 197 220 8.6E-58 T 11-10-2018 IPR001972 Stomatin family GO:0016020 syc1693_d 3621c353ad83da6ccd29749c8a64899a 273 PRINTS PR00721 Stomatin signature 74 95 8.6E-58 T 11-10-2018 IPR001972 Stomatin family GO:0016020 syc1693_d 3621c353ad83da6ccd29749c8a64899a 273 Gene3D G3DSA:3.30.479.30 48 179 4.2E-44 T 11-10-2018 syc1693_d 3621c353ad83da6ccd29749c8a64899a 273 Pfam PF01145 SPFH domain / Band 7 family 27 193 1.9E-31 T 11-10-2018 IPR001107 Band 7 domain syc1693_d 3621c353ad83da6ccd29749c8a64899a 273 SMART SM00244 20 177 1.5E-54 T 11-10-2018 IPR001107 Band 7 domain syc1041_d 9ab24b2564672e6c837ae01e6cecb36a 203 SUPERFAMILY SSF51306 36 187 8.63E-55 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily syc1041_d 9ab24b2564672e6c837ae01e6cecb36a 203 Gene3D G3DSA:2.10.109.10 34 125 3.6E-18 T 11-10-2018 syc1041_d 9ab24b2564672e6c837ae01e6cecb36a 203 Gene3D G3DSA:2.10.109.10 141 179 2.6E-16 T 11-10-2018 syc1041_d 9ab24b2564672e6c837ae01e6cecb36a 203 ProSitePatterns PS00501 Signal peptidases I serine active site. 47 54 - T 11-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 syc1041_d 9ab24b2564672e6c837ae01e6cecb36a 203 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 23 182 2.0E-42 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 syc1041_d 9ab24b2564672e6c837ae01e6cecb36a 203 ProSitePatterns PS00761 Signal peptidases I signature 3. 146 159 - T 11-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 syc1041_d 9ab24b2564672e6c837ae01e6cecb36a 203 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 141 160 2.3E-17 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 syc1041_d 9ab24b2564672e6c837ae01e6cecb36a 203 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 38 54 2.3E-17 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 syc1041_d 9ab24b2564672e6c837ae01e6cecb36a 203 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 97 109 2.3E-17 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 syc1041_d 9ab24b2564672e6c837ae01e6cecb36a 203 Pfam PF00717 Peptidase S24-like 45 116 2.0E-16 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C syc0952_d 531c34a841a2589c194c983076eed4c4 447 Pfam PF14579 Helix-hairpin-helix motif 90 181 2.3E-27 T 11-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 syc0952_d 531c34a841a2589c194c983076eed4c4 447 TIGRFAM TIGR01443 intein_Cterm: intein C-terminal splicing region 14 37 7.4E-7 T 11-10-2018 IPR030934 Intein C-terminal splicing region syc0952_d 531c34a841a2589c194c983076eed4c4 447 Gene3D G3DSA:1.10.150.870 61 167 5.9E-6 T 11-10-2018 syc0952_d 531c34a841a2589c194c983076eed4c4 447 Gene3D G3DSA:2.170.16.10 1 44 1.1E-11 T 11-10-2018 syc1374_d 60b7e81826a2ff4a20f6d89f673be116 941 SMART SM00100 811 931 4.7E-8 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain syc1374_d 60b7e81826a2ff4a20f6d89f673be116 941 SUPERFAMILY SSF51206 806 939 2.75E-22 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like syc1374_d 60b7e81826a2ff4a20f6d89f673be116 941 Pfam PF00027 Cyclic nucleotide-binding domain 830 915 5.7E-13 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain syc1374_d 60b7e81826a2ff4a20f6d89f673be116 941 Gene3D G3DSA:2.60.120.10 805 941 2.6E-22 T 11-10-2018 IPR014710 RmlC-like jelly roll fold syc0522_d 34c4a555e7c2ff8b94979ce59e38a56a 330 Pfam PF00892 EamA-like transporter family 165 298 4.9E-20 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 syc0522_d 34c4a555e7c2ff8b94979ce59e38a56a 330 Pfam PF00892 EamA-like transporter family 24 152 5.5E-25 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 syc0522_d 34c4a555e7c2ff8b94979ce59e38a56a 330 SUPERFAMILY SSF103481 205 302 1.26E-11 T 11-10-2018 syc0522_d 34c4a555e7c2ff8b94979ce59e38a56a 330 SUPERFAMILY SSF103481 55 155 6.02E-16 T 11-10-2018 syc1054_d e4ff364e55cf4173ca90e5de9697c533 113 PIRSF PIRSF004555 12 113 4.0E-27 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family syc1054_d e4ff364e55cf4173ca90e5de9697c533 113 Gene3D G3DSA:3.30.1310.10 7 113 1.1E-28 T 11-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily syc1054_d e4ff364e55cf4173ca90e5de9697c533 113 Pfam PF02575 YbaB/EbfC DNA-binding family 21 108 7.9E-26 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family syc1054_d e4ff364e55cf4173ca90e5de9697c533 113 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 11 113 3.5E-25 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family syc1054_d e4ff364e55cf4173ca90e5de9697c533 113 SUPERFAMILY SSF82607 20 113 1.7E-28 T 11-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily syc1054_d e4ff364e55cf4173ca90e5de9697c533 113 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 14 107 18.212 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family syc1959_d 75bc8cc80a1c2de74b2d02c26c50b190 183 Gene3D G3DSA:3.10.180.10 44 180 9.0E-8 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase syc1959_d 75bc8cc80a1c2de74b2d02c26c50b190 183 SUPERFAMILY SSF54593 46 178 4.15E-7 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase syc1052_c f4a00f000b4d01ae249dc362068850dc 749 Pfam PF13641 Glycosyltransferase like family 2 185 409 3.9E-29 T 11-10-2018 syc1052_c f4a00f000b4d01ae249dc362068850dc 749 SUPERFAMILY SSF53448 184 457 2.11E-48 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases syc1052_c f4a00f000b4d01ae249dc362068850dc 749 PRINTS PR01439 Cellulose synthase subunit A signature 434 460 2.4E-15 T 11-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 syc1052_c f4a00f000b4d01ae249dc362068850dc 749 PRINTS PR01439 Cellulose synthase subunit A signature 106 126 2.4E-15 T 11-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 syc1052_c f4a00f000b4d01ae249dc362068850dc 749 PRINTS PR01439 Cellulose synthase subunit A signature 542 566 2.4E-15 T 11-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 syc1052_c f4a00f000b4d01ae249dc362068850dc 749 PRINTS PR01439 Cellulose synthase subunit A signature 194 213 2.4E-15 T 11-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 syc1052_c f4a00f000b4d01ae249dc362068850dc 749 PRINTS PR01439 Cellulose synthase subunit A signature 502 521 2.4E-15 T 11-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 syc1052_c f4a00f000b4d01ae249dc362068850dc 749 PRINTS PR01439 Cellulose synthase subunit A signature 580 601 2.4E-15 T 11-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 syc1052_c f4a00f000b4d01ae249dc362068850dc 749 Gene3D G3DSA:3.90.550.10 177 393 5.5E-77 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases syc0986_d d35c06cd306338f35c1e05b62cd056e5 81 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 48 59 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site syc0986_d d35c06cd306338f35c1e05b62cd056e5 81 Gene3D G3DSA:3.30.70.20 1 81 6.5E-36 T 11-10-2018 syc0986_d d35c06cd306338f35c1e05b62cd056e5 81 SUPERFAMILY SSF54862 7 66 4.75E-16 T 11-10-2018 syc0986_d d35c06cd306338f35c1e05b62cd056e5 81 Hamap MF_01303 Photosystem I iron-sulfur center [psaC]. 1 81 37.08 T 11-10-2018 IPR017491 Photosystem I protein PsaC GO:0009055|GO:0009522|GO:0009773|GO:0015979|GO:0042651|GO:0051539 MetaCyc: PWY-101 syc0986_d d35c06cd306338f35c1e05b62cd056e5 81 Pfam PF12838 4Fe-4S dicluster domain 10 61 1.5E-9 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain syc0986_d d35c06cd306338f35c1e05b62cd056e5 81 TIGRFAM TIGR03048 PS_I_psaC: photosystem I iron-sulfur protein PsaC 2 81 1.6E-56 T 11-10-2018 IPR017491 Photosystem I protein PsaC GO:0009055|GO:0009522|GO:0009773|GO:0015979|GO:0042651|GO:0051539 MetaCyc: PWY-101 syc0877_c efaa931c34ac8cece21d7be78162b10f 806 Gene3D G3DSA:1.10.8.630 10 118 9.4E-16 T 11-10-2018 syc0877_c efaa931c34ac8cece21d7be78162b10f 806 SUPERFAMILY SSF52540 541 717 5.74E-30 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0877_c efaa931c34ac8cece21d7be78162b10f 806 SMART SM00487 265 465 1.1E-24 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain syc0877_c efaa931c34ac8cece21d7be78162b10f 806 SUPERFAMILY SSF52540 265 439 1.63E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0877_c efaa931c34ac8cece21d7be78162b10f 806 Gene3D G3DSA:3.40.50.300 256 449 2.0E-67 T 11-10-2018 syc0877_c efaa931c34ac8cece21d7be78162b10f 806 SMART SM00490 572 669 8.6E-11 T 11-10-2018 IPR001650 Helicase, C-terminal syc0877_c efaa931c34ac8cece21d7be78162b10f 806 TIGRFAM TIGR00595 priA: primosomal protein N' 290 804 9.3E-187 T 11-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 syc0877_c efaa931c34ac8cece21d7be78162b10f 806 Gene3D G3DSA:3.40.50.300 531 702 1.6E-17 T 11-10-2018 syc0877_c efaa931c34ac8cece21d7be78162b10f 806 Pfam PF00270 DEAD/DEAH box helicase 270 431 7.1E-13 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 syc0877_c efaa931c34ac8cece21d7be78162b10f 806 Hamap MF_00983 Probable primosomal protein N' [priA]. 14 806 23.206 T 11-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 syc0877_c efaa931c34ac8cece21d7be78162b10f 806 Pfam PF00271 Helicase conserved C-terminal domain 585 668 5.1E-8 T 11-10-2018 IPR001650 Helicase, C-terminal syc0207_c 8ab9530946cfe0db166590eaee2d691c 103 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 3 103 20.455 T 11-10-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 syc0207_c 8ab9530946cfe0db166590eaee2d691c 103 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 8 98 6.5E-27 T 11-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like syc1951_c 22fd8c632e8d70112e55e728ed8c29dd 117 Gene3D G3DSA:2.60.120.10 1 115 1.8E-32 T 11-10-2018 IPR014710 RmlC-like jelly roll fold syc1951_c 22fd8c632e8d70112e55e728ed8c29dd 117 Pfam PF07883 Cupin domain 36 103 5.7E-16 T 11-10-2018 IPR013096 Cupin 2, conserved barrel syc1951_c 22fd8c632e8d70112e55e728ed8c29dd 117 SUPERFAMILY SSF51182 2 106 3.37E-20 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily syc0630_c edcf3b6cf3566ec79b3f3228b469492d 652 Gene3D G3DSA:1.20.272.10 247 364 5.7E-10 T 11-10-2018 syc0630_c edcf3b6cf3566ec79b3f3228b469492d 652 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 233 366 8.5E-18 T 11-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 syc0630_c edcf3b6cf3566ec79b3f3228b469492d 652 SMART SM00382 37 181 2.7E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain syc0630_c edcf3b6cf3566ec79b3f3228b469492d 652 SUPERFAMILY SSF52540 32 223 8.58E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0630_c edcf3b6cf3566ec79b3f3228b469492d 652 Gene3D G3DSA:3.40.50.300 13 179 1.9E-101 T 11-10-2018 syc0630_c edcf3b6cf3566ec79b3f3228b469492d 652 Gene3D G3DSA:1.10.8.60 9 227 1.9E-101 T 11-10-2018 syc0630_c edcf3b6cf3566ec79b3f3228b469492d 652 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 358 3.2E-132 T 11-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 syc0630_c edcf3b6cf3566ec79b3f3228b469492d 652 SUPERFAMILY SSF48019 245 368 1.19E-22 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 syc0630_c edcf3b6cf3566ec79b3f3228b469492d 652 Pfam PF13177 DNA polymerase III, delta subunit 20 180 5.6E-46 T 11-10-2018 syc1377_c ac8bce3192a43567b333bb6a2720d47c 222 SUPERFAMILY SSF46785 144 220 5.39E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily syc1377_c ac8bce3192a43567b333bb6a2720d47c 222 Pfam PF13545 Crp-like helix-turn-helix domain 147 218 7.0E-16 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 syc1377_c ac8bce3192a43567b333bb6a2720d47c 222 Gene3D G3DSA:2.60.120.10 1 128 8.4E-53 T 11-10-2018 IPR014710 RmlC-like jelly roll fold syc1377_c ac8bce3192a43567b333bb6a2720d47c 222 SUPERFAMILY SSF51206 22 140 3.01E-28 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like syc1377_c ac8bce3192a43567b333bb6a2720d47c 222 Gene3D G3DSA:1.10.10.10 129 222 5.9E-36 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily syc1377_c ac8bce3192a43567b333bb6a2720d47c 222 SMART SM00100 7 126 7.2E-16 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain syc1377_c ac8bce3192a43567b333bb6a2720d47c 222 ProSitePatterns PS00042 Crp-type HTH domain signature. 173 196 - T 11-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 syc1377_c ac8bce3192a43567b333bb6a2720d47c 222 SMART SM00419 165 213 9.5E-16 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 syc1377_c ac8bce3192a43567b333bb6a2720d47c 222 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 187 202 2.7E-6 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 syc1377_c ac8bce3192a43567b333bb6a2720d47c 222 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 171 187 2.7E-6 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 syc1377_c ac8bce3192a43567b333bb6a2720d47c 222 Pfam PF00027 Cyclic nucleotide-binding domain 25 111 3.2E-17 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain syc1377_c ac8bce3192a43567b333bb6a2720d47c 222 TIGRFAM TIGR03697 NtcA_cyano: global nitrogen regulator NtcA 30 222 2.2E-112 T 11-10-2018 IPR022299 Transcription regulator, NtcA GO:0003677|GO:0003700|GO:0006355 syc2244_d 8d506932b74d898fe4076ae74f6880a4 409 SUPERFAMILY SSF53790 9 211 2.22E-37 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 syc2244_d 8d506932b74d898fe4076ae74f6880a4 409 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 12 190 7.0E-16 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 syc2244_d 8d506932b74d898fe4076ae74f6880a4 409 Gene3D G3DSA:3.40.1010.10 9 109 6.4E-16 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 syc2244_d 8d506932b74d898fe4076ae74f6880a4 409 TIGRFAM TIGR02467 CbiE: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 12 197 2.1E-41 T 11-10-2018 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase GO:0008276|GO:0009236 syc2244_d 8d506932b74d898fe4076ae74f6880a4 409 SUPERFAMILY SSF53335 216 402 1.39E-28 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase syc2244_d 8d506932b74d898fe4076ae74f6880a4 409 TIGRFAM TIGR02469 CbiT: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 238 359 2.9E-34 T 11-10-2018 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit GO:0008276|GO:0009236 KEGG: 00860+2.1.1.196|MetaCyc: PWY-7377 syc2244_d 8d506932b74d898fe4076ae74f6880a4 409 Gene3D G3DSA:3.40.50.150 232 408 6.3E-70 T 11-10-2018 syc2244_d 8d506932b74d898fe4076ae74f6880a4 409 PIRSF PIRSF036428 5 409 4.4E-136 T 11-10-2018 IPR006365 Cobalamin (vitamin B12) biosynthesis CobL/Precorrin-6Y C(5,15)-methyltransferase GO:0008276|GO:0009236 KEGG: 00860+2.1.1.132 syc2026_c c801df8a4f0f0ad172493ab7140134f8 415 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 8.2E-7 T 11-10-2018 syc2026_c c801df8a4f0f0ad172493ab7140134f8 415 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 162 171 8.2E-7 T 11-10-2018 syc2026_c c801df8a4f0f0ad172493ab7140134f8 415 SUPERFAMILY SSF51905 1 407 1.53E-41 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc2026_c c801df8a4f0f0ad172493ab7140134f8 415 Pfam PF03486 HI0933-like protein 6 403 1.9E-122 T 11-10-2018 syc2026_c c801df8a4f0f0ad172493ab7140134f8 415 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 159 177 1.5E-8 T 11-10-2018 syc2026_c c801df8a4f0f0ad172493ab7140134f8 415 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 358 380 1.5E-8 T 11-10-2018 syc2026_c c801df8a4f0f0ad172493ab7140134f8 415 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.5E-8 T 11-10-2018 syc2026_c c801df8a4f0f0ad172493ab7140134f8 415 SUPERFAMILY SSF160996 186 351 9.68E-42 T 11-10-2018 syc2026_c c801df8a4f0f0ad172493ab7140134f8 415 Gene3D G3DSA:2.40.30.10 187 350 4.3E-109 T 11-10-2018 syc2026_c c801df8a4f0f0ad172493ab7140134f8 415 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 7 403 4.1E-127 T 11-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like syc2026_c c801df8a4f0f0ad172493ab7140134f8 415 Gene3D G3DSA:3.50.50.60 7 402 4.3E-109 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc2026_c c801df8a4f0f0ad172493ab7140134f8 415 Gene3D G3DSA:1.10.8.260 269 333 4.3E-109 T 11-10-2018 IPR023166 HI0933-like insert domain superfamily syc1754_c 137796e5a31573fd73f731f82b768671 397 Pfam PF00437 Type II/IV secretion system protein 55 315 8.5E-48 T 11-10-2018 IPR001482 Type II/IV secretion system protein syc1754_c 137796e5a31573fd73f731f82b768671 397 Gene3D G3DSA:3.40.50.300 147 396 1.2E-92 T 11-10-2018 syc1754_c 137796e5a31573fd73f731f82b768671 397 SUPERFAMILY SSF52540 45 380 3.15E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc1754_c 137796e5a31573fd73f731f82b768671 397 Gene3D G3DSA:3.30.450.90 48 145 5.3E-17 T 11-10-2018 syc1754_c 137796e5a31573fd73f731f82b768671 397 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 238 252 - T 11-10-2018 IPR001482 Type II/IV secretion system protein syc1754_c 137796e5a31573fd73f731f82b768671 397 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 49 388 1.4E-133 T 11-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 syc1754_c 137796e5a31573fd73f731f82b768671 397 SMART SM00382 167 300 0.0043 T 11-10-2018 IPR003593 AAA+ ATPase domain syc1284_c ce6aaa706227b129da1e65bd9cf14051 190 Gene3D G3DSA:2.160.20.20 23 184 1.8E-9 T 11-10-2018 IPR012332 P22 tailspike-like, C-terminal domain superfamily syc0841_c dc82efba055c2ada9e2b229082beea18 112 Gene3D G3DSA:1.10.10.10 17 111 7.0E-29 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily syc0841_c dc82efba055c2ada9e2b229082beea18 112 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 54 69 8.6E-22 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 syc0841_c dc82efba055c2ada9e2b229082beea18 112 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 69 84 8.6E-22 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 syc0841_c dc82efba055c2ada9e2b229082beea18 112 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 41 52 8.6E-22 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 syc0841_c dc82efba055c2ada9e2b229082beea18 112 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 22 37 8.6E-22 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 syc0841_c dc82efba055c2ada9e2b229082beea18 112 Pfam PF01022 Bacterial regulatory protein, arsR family 27 72 6.5E-19 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 syc0841_c dc82efba055c2ada9e2b229082beea18 112 SUPERFAMILY SSF46785 11 99 2.36E-26 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily syc0841_c dc82efba055c2ada9e2b229082beea18 112 SMART SM00418 20 98 2.3E-28 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 syc1441_d 13cbf14adb83f02fa7cbd37d06d31fc2 368 Pfam PF16363 GDP-mannose 4,6 dehydratase 12 340 1.9E-36 T 11-10-2018 IPR016040 NAD(P)-binding domain syc1441_d 13cbf14adb83f02fa7cbd37d06d31fc2 368 Gene3D G3DSA:3.90.25.10 200 368 3.2E-55 T 11-10-2018 syc1441_d 13cbf14adb83f02fa7cbd37d06d31fc2 368 Gene3D G3DSA:3.40.50.720 1 199 4.3E-44 T 11-10-2018 syc1441_d 13cbf14adb83f02fa7cbd37d06d31fc2 368 TIGRFAM TIGR02622 CDP_4_6_dhtase: CDP-glucose 4,6-dehydratase 5 366 1.9E-157 T 11-10-2018 IPR013445 CDP-glucose 4,6-dehydratase KEGG: 00520+4.2.1.45|MetaCyc: PWY-5833 syc1441_d 13cbf14adb83f02fa7cbd37d06d31fc2 368 SUPERFAMILY SSF51735 9 346 6.02E-58 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily syc2495_c baaee24b2a0fa5faa45f8e38c793e453 259 Pfam PF04539 Sigma-70 region 3 116 186 4.4E-7 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 syc2495_c baaee24b2a0fa5faa45f8e38c793e453 259 Pfam PF04542 Sigma-70 region 2 32 101 1.4E-15 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 syc2495_c baaee24b2a0fa5faa45f8e38c793e453 259 Gene3D G3DSA:1.10.10.10 184 256 2.8E-14 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily syc2495_c baaee24b2a0fa5faa45f8e38c793e453 259 SUPERFAMILY SSF88946 14 101 1.38E-27 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 syc2495_c baaee24b2a0fa5faa45f8e38c793e453 259 Gene3D G3DSA:1.10.10.10 106 183 8.0E-15 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily syc2495_c baaee24b2a0fa5faa45f8e38c793e453 259 Gene3D G3DSA:1.10.601.10 9 105 1.8E-19 T 11-10-2018 syc2495_c baaee24b2a0fa5faa45f8e38c793e453 259 Pfam PF04545 Sigma-70, region 4 202 250 7.8E-12 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 syc2495_c baaee24b2a0fa5faa45f8e38c793e453 259 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 57 70 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 syc2495_c baaee24b2a0fa5faa45f8e38c793e453 259 SUPERFAMILY SSF88659 171 255 1.05E-14 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like syc2495_c baaee24b2a0fa5faa45f8e38c793e453 259 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 29 252 2.1E-33 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 syc2495_c baaee24b2a0fa5faa45f8e38c793e453 259 SUPERFAMILY SSF88659 106 183 1.4E-14 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like syc1237_d d1147d16193e9e91458942d58648608e 486 SUPERFAMILY SSF55103 225 472 5.56E-67 T 11-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 syc1237_d d1147d16193e9e91458942d58648608e 486 SUPERFAMILY SSF56176 11 222 4.67E-67 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 syc1237_d d1147d16193e9e91458942d58648608e 486 Gene3D G3DSA:1.10.45.10 424 464 1.5E-5 T 11-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 syc1237_d d1147d16193e9e91458942d58648608e 486 Gene3D G3DSA:3.30.70.2740 342 423 1.4E-8 T 11-10-2018 syc1237_d d1147d16193e9e91458942d58648608e 486 Pfam PF02913 FAD linked oxidases, C-terminal domain 222 463 5.3E-68 T 11-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 syc1237_d d1147d16193e9e91458942d58648608e 486 Gene3D G3DSA:3.30.465.40 9 240 2.8E-66 T 11-10-2018 syc1237_d d1147d16193e9e91458942d58648608e 486 Pfam PF01565 FAD binding domain 47 185 1.3E-35 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 syc0326_d f0f634d71b86acd9a7e0d5555f579af3 366 TIGRFAM TIGR02971 heterocyst_DevB: ABC exporter membrane fusion protein, DevB family 60 361 1.4E-84 T 11-10-2018 IPR014315 ABC transporter, membrane fusion protein, DevB type syc0326_d f0f634d71b86acd9a7e0d5555f579af3 366 Gene3D G3DSA:1.10.287.470 109 238 2.5E-34 T 11-10-2018 syc0326_d f0f634d71b86acd9a7e0d5555f579af3 366 SUPERFAMILY SSF111369 191 300 3.79E-7 T 11-10-2018 syc0326_d f0f634d71b86acd9a7e0d5555f579af3 366 Pfam PF13437 HlyD family secretion protein 238 345 1.1E-12 T 11-10-2018 syc0326_d f0f634d71b86acd9a7e0d5555f579af3 366 Gene3D G3DSA:2.40.30.170 59 347 2.5E-34 T 11-10-2018 syc0326_d f0f634d71b86acd9a7e0d5555f579af3 366 Gene3D G3DSA:2.40.50.100 71 271 2.5E-34 T 11-10-2018 syc0326_d f0f634d71b86acd9a7e0d5555f579af3 366 Pfam PF13533 Biotin-lipoyl like 72 120 5.0E-8 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain syc2449_d 7027c110f60a850029351199ea9d5131 135 Gene3D G3DSA:3.30.1360.20 47 135 2.1E-27 T 11-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 syc2449_d 7027c110f60a850029351199ea9d5131 135 SUPERFAMILY SSF55248 47 135 5.89E-28 T 11-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 syc2449_d 7027c110f60a850029351199ea9d5131 135 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 48 134 1.6E-27 T 11-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 syc1600_d 1e7b6088a957ae8ada6dd75c2b674558 232 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 35 208 2.4E-53 T 11-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 syc1600_d 1e7b6088a957ae8ada6dd75c2b674558 232 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 2 232 38.458 T 11-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 syc1600_d 1e7b6088a957ae8ada6dd75c2b674558 232 Gene3D G3DSA:3.40.50.620 5 232 1.5E-62 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold syc1600_d 1e7b6088a957ae8ada6dd75c2b674558 232 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 20 231 5.6E-85 T 11-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 syc1600_d 1e7b6088a957ae8ada6dd75c2b674558 232 PIRSF PIRSF000857 3 232 7.1E-57 T 11-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 syc1600_d 1e7b6088a957ae8ada6dd75c2b674558 232 SUPERFAMILY SSF52402 9 196 9.02E-56 T 11-10-2018 syc1600_d 1e7b6088a957ae8ada6dd75c2b674558 232 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 8 231 1.2E-87 T 11-10-2018 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8 syc1010_d d5cf927829602b84a55eae39c0fa4a86 216 Gene3D G3DSA:3.90.1470.20 19 138 1.4E-42 T 11-10-2018 syc1010_d d5cf927829602b84a55eae39c0fa4a86 216 Pfam PF12710 haloacid dehalogenase-like hydrolase 10 172 5.8E-15 T 11-10-2018 syc1010_d d5cf927829602b84a55eae39c0fa4a86 216 SUPERFAMILY SSF56784 8 210 4.35E-36 T 11-10-2018 IPR036412 HAD-like superfamily syc1010_d d5cf927829602b84a55eae39c0fa4a86 216 Gene3D G3DSA:3.40.50.1000 10 207 1.4E-42 T 11-10-2018 IPR023214 HAD superfamily syc1010_d d5cf927829602b84a55eae39c0fa4a86 216 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 9 172 5.3E-17 T 11-10-2018 syc1444_d 1ccb2efb3a1da652456ee68719b1e156 375 Gene3D G3DSA:3.40.640.10 1 250 6.2E-94 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 syc1444_d 1ccb2efb3a1da652456ee68719b1e156 375 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 16 365 6.7E-115 T 11-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase syc1444_d 1ccb2efb3a1da652456ee68719b1e156 375 Gene3D G3DSA:3.90.1150.10 251 371 9.4E-17 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 syc1444_d 1ccb2efb3a1da652456ee68719b1e156 375 SUPERFAMILY SSF53383 8 370 1.25E-103 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase syc1444_d 1ccb2efb3a1da652456ee68719b1e156 375 PIRSF PIRSF000390 4 374 6.8E-122 T 11-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase syc1073_d b6bda49c46cf0de48d117313a182deb1 351 Gene3D G3DSA:1.10.3720.10 132 350 1.2E-24 T 11-10-2018 IPR035906 MetI-like superfamily syc1073_d b6bda49c46cf0de48d117313a182deb1 351 SUPERFAMILY SSF161098 137 335 2.62E-26 T 11-10-2018 IPR035906 MetI-like superfamily syc1073_d b6bda49c46cf0de48d117313a182deb1 351 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 161 350 7.4E-32 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 syc2221_c 5279abafadc203fb78c32d1f51cdb24e 226 SMART SM00448 3 114 1.2E-40 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 syc2221_c 5279abafadc203fb78c32d1f51cdb24e 226 SUPERFAMILY SSF52172 4 181 4.68E-41 T 11-10-2018 IPR011006 CheY-like superfamily syc2221_c 5279abafadc203fb78c32d1f51cdb24e 226 Gene3D G3DSA:1.10.10.10 124 225 3.6E-33 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily syc2221_c 5279abafadc203fb78c32d1f51cdb24e 226 SMART SM00862 147 222 4.4E-26 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 syc2221_c 5279abafadc203fb78c32d1f51cdb24e 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 221 1.5E-26 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 syc2221_c 5279abafadc203fb78c32d1f51cdb24e 226 Pfam PF00072 Response regulator receiver domain 5 115 1.3E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 syc2221_c 5279abafadc203fb78c32d1f51cdb24e 226 Gene3D G3DSA:3.40.50.2300 1 123 5.7E-39 T 11-10-2018 syc2301_c a25c7ac8f4c1ffbc24d291db547d0693 326 PIRSF PIRSF001415 1 326 6.0E-156 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 syc2301_c a25c7ac8f4c1ffbc24d291db547d0693 326 Gene3D G3DSA:3.20.20.70 1 326 6.9E-146 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 syc2301_c a25c7ac8f4c1ffbc24d291db547d0693 326 Pfam PF00490 Delta-aminolevulinic acid dehydratase 5 324 1.5E-150 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 syc2301_c a25c7ac8f4c1ffbc24d291db547d0693 326 SUPERFAMILY SSF51569 1 325 5.57E-143 T 11-10-2018 syc2301_c a25c7ac8f4c1ffbc24d291db547d0693 326 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 244 256 - T 11-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 syc2301_c a25c7ac8f4c1ffbc24d291db547d0693 326 SMART SM01004 2 325 3.5E-246 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 syc2301_c a25c7ac8f4c1ffbc24d291db547d0693 326 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 192 211 1.1E-60 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 syc2301_c a25c7ac8f4c1ffbc24d291db547d0693 326 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 120 134 1.1E-60 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 syc2301_c a25c7ac8f4c1ffbc24d291db547d0693 326 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 269 284 1.1E-60 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 syc2301_c a25c7ac8f4c1ffbc24d291db547d0693 326 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 299 318 1.1E-60 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 syc2301_c a25c7ac8f4c1ffbc24d291db547d0693 326 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 244 260 1.1E-60 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 syc2301_c a25c7ac8f4c1ffbc24d291db547d0693 326 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 154 173 1.1E-60 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 syc2296_c 20281249d8c87c45d7b687f4718df3a3 177 Gene3D G3DSA:1.10.443.10 1 146 1.1E-13 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 syc2296_c 20281249d8c87c45d7b687f4718df3a3 177 SUPERFAMILY SSF56349 9 145 1.09E-14 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 syc1774_c de5e3345802091dbbe8f9842c8129199 363 Gene3D G3DSA:1.25.40.10 237 348 3.8E-22 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc1774_c de5e3345802091dbbe8f9842c8129199 363 Pfam PF13371 Tetratricopeptide repeat 284 337 8.2E-9 T 11-10-2018 syc1774_c de5e3345802091dbbe8f9842c8129199 363 Gene3D G3DSA:1.25.40.10 165 236 2.4E-16 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc1774_c de5e3345802091dbbe8f9842c8129199 363 Pfam PF13424 Tetratricopeptide repeat 99 163 4.3E-12 T 11-10-2018 syc1774_c de5e3345802091dbbe8f9842c8129199 363 Pfam PF13424 Tetratricopeptide repeat 30 96 1.8E-10 T 11-10-2018 syc1774_c de5e3345802091dbbe8f9842c8129199 363 Gene3D G3DSA:1.25.40.10 91 164 1.4E-24 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc1774_c de5e3345802091dbbe8f9842c8129199 363 SUPERFAMILY SSF48452 13 337 1.71E-52 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc1774_c de5e3345802091dbbe8f9842c8129199 363 Pfam PF13432 Tetratricopeptide repeat 172 227 4.1E-8 T 11-10-2018 syc1774_c de5e3345802091dbbe8f9842c8129199 363 SMART SM00028 200 233 4.8 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc1774_c de5e3345802091dbbe8f9842c8129199 363 SMART SM00028 64 97 7.0E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc1774_c de5e3345802091dbbe8f9842c8129199 363 SMART SM00028 234 267 210.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc1774_c de5e3345802091dbbe8f9842c8129199 363 SMART SM00028 166 199 9.5E-5 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc1774_c de5e3345802091dbbe8f9842c8129199 363 SMART SM00028 270 303 5.5 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc1774_c de5e3345802091dbbe8f9842c8129199 363 SMART SM00028 304 337 4.7E-6 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc1774_c de5e3345802091dbbe8f9842c8129199 363 SMART SM00028 30 63 6.4E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc1774_c de5e3345802091dbbe8f9842c8129199 363 SMART SM00028 98 131 3.2E-7 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc1774_c de5e3345802091dbbe8f9842c8129199 363 SMART SM00028 132 165 4.8E-6 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc1774_c de5e3345802091dbbe8f9842c8129199 363 Gene3D G3DSA:1.25.40.10 8 90 1.1E-17 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc1613_d 07ad258baa093ce642f032a695acadbf 253 SMART SM00382 28 228 1.0E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain syc1613_d 07ad258baa093ce642f032a695acadbf 253 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 syc1613_d 07ad258baa093ce642f032a695acadbf 253 SUPERFAMILY SSF52540 3 251 2.28E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc1613_d 07ad258baa093ce642f032a695acadbf 253 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 229 251 2.8E-9 T 11-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal syc1613_d 07ad258baa093ce642f032a695acadbf 253 Pfam PF00005 ABC transporter 20 179 1.6E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 syc1613_d 07ad258baa093ce642f032a695acadbf 253 Gene3D G3DSA:3.40.50.300 2 253 4.6E-62 T 11-10-2018 syc0307_d 01259030e21b48c633ee8dc3d4770cb0 231 Gene3D G3DSA:2.60.120.10 3 145 3.8E-31 T 11-10-2018 IPR014710 RmlC-like jelly roll fold syc0307_d 01259030e21b48c633ee8dc3d4770cb0 231 SUPERFAMILY SSF46785 146 213 5.03E-6 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily syc0307_d 01259030e21b48c633ee8dc3d4770cb0 231 SMART SM00100 12 133 2.1E-20 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain syc0307_d 01259030e21b48c633ee8dc3d4770cb0 231 SUPERFAMILY SSF51206 6 139 8.64E-28 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like syc0307_d 01259030e21b48c633ee8dc3d4770cb0 231 Pfam PF00027 Cyclic nucleotide-binding domain 30 116 5.7E-14 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain syc0923_d 5a91e6ccf5c49de5ac53f7332060f588 510 Gene3D G3DSA:3.30.200.20 5 96 1.7E-22 T 11-10-2018 syc0923_d 5a91e6ccf5c49de5ac53f7332060f588 510 Pfam PF00069 Protein kinase domain 16 279 2.7E-49 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 syc0923_d 5a91e6ccf5c49de5ac53f7332060f588 510 SMART SM00220 16 285 4.8E-46 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 syc0923_d 5a91e6ccf5c49de5ac53f7332060f588 510 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 143 155 - T 11-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 syc0923_d 5a91e6ccf5c49de5ac53f7332060f588 510 SUPERFAMILY SSF56112 8 282 2.7E-66 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily syc0923_d 5a91e6ccf5c49de5ac53f7332060f588 510 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 22 45 - T 11-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 syc0923_d 5a91e6ccf5c49de5ac53f7332060f588 510 Gene3D G3DSA:1.10.510.10 97 303 2.8E-43 T 11-10-2018 syc2114_d 23374758bdeb0adc890bfde5d4ae5185 110 Pfam PF10664 Cyanobacterial and plastid NDH-1 subunit M 3 107 1.4E-53 T 11-10-2018 IPR018922 NAD(P)H-quinone oxidoreductase subunit M GO:0016655|GO:0055114 syc2114_d 23374758bdeb0adc890bfde5d4ae5185 110 Hamap MF_01352 NAD(P)H-quinone oxidoreductase subunit M [ndhM]. 1 109 32.299 T 11-10-2018 IPR018922 NAD(P)H-quinone oxidoreductase subunit M GO:0016655|GO:0055114 syc0164_c 468fbac383357a98d3119e473df30ce2 512 Gene3D G3DSA:3.40.50.300 193 505 3.7E-56 T 11-10-2018 syc0164_c 468fbac383357a98d3119e473df30ce2 512 Pfam PF13541 Subunit ChlI of Mg-chelatase 20 142 3.6E-43 T 11-10-2018 syc0164_c 468fbac383357a98d3119e473df30ce2 512 SUPERFAMILY SSF52540 196 509 1.24E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0164_c 468fbac383357a98d3119e473df30ce2 512 Gene3D G3DSA:3.30.230.10 30 169 4.0E-16 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup syc0164_c 468fbac383357a98d3119e473df30ce2 512 Pfam PF01078 Magnesium chelatase, subunit ChlI 196 400 9.4E-95 T 11-10-2018 IPR000523 Magnesium chelatase ChlI domain syc0164_c 468fbac383357a98d3119e473df30ce2 512 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 504 1.6E-206 T 11-10-2018 IPR004482 Mg chelatase-related protein syc0164_c 468fbac383357a98d3119e473df30ce2 512 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 409 504 5.7E-31 T 11-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain syc0164_c 468fbac383357a98d3119e473df30ce2 512 SUPERFAMILY SSF54211 5 168 7.21E-38 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold syc0164_c 468fbac383357a98d3119e473df30ce2 512 SMART SM00382 216 399 1.9E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain syc2287_c adb55e8adcb7396bd337b171453de5b6 157 Gene3D G3DSA:3.40.30.10 2 152 2.6E-48 T 11-10-2018 syc2287_c adb55e8adcb7396bd337b171453de5b6 157 SUPERFAMILY SSF52833 1 151 3.86E-48 T 11-10-2018 IPR036249 Thioredoxin-like superfamily syc2287_c adb55e8adcb7396bd337b171453de5b6 157 Pfam PF00578 AhpC/TSA family 5 133 8.7E-39 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 syc2287_c adb55e8adcb7396bd337b171453de5b6 157 PIRSF PIRSF000239 1 149 4.8E-22 T 11-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 syc0832_c 1c7a4473c127b1607995391341d9be87 144 Gene3D G3DSA:3.10.20.30 1 107 2.3E-20 T 11-10-2018 IPR012675 Beta-grasp domain superfamily syc0832_c 1c7a4473c127b1607995391341d9be87 144 SUPERFAMILY SSF54292 2 100 1.19E-19 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 syc0832_c 1c7a4473c127b1607995391341d9be87 144 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 40 88 9.6E-9 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 syc0499_c 4b68ba442b6be92a45685c65cb1370c5 273 PIRSF PIRSF005898 2 270 1.5E-77 T 11-10-2018 IPR016470 Phycobilisome linker protein GO:0015979|GO:0030089 syc0499_c 4b68ba442b6be92a45685c65cb1370c5 273 Pfam PF00427 Phycobilisome Linker polypeptide 28 152 1.1E-50 T 11-10-2018 IPR001297 Phycobilisome linker domain GO:0015979|GO:0030089 syc0499_c 4b68ba442b6be92a45685c65cb1370c5 273 SMART SM01094 219 273 3.6E-24 T 11-10-2018 IPR008213 CpcD-like domain GO:0030089 syc0499_c 4b68ba442b6be92a45685c65cb1370c5 273 Pfam PF01383 CpcD/allophycocyanin linker domain 220 272 6.6E-18 T 11-10-2018 IPR008213 CpcD-like domain GO:0030089 syc0499_c 4b68ba442b6be92a45685c65cb1370c5 273 ProDom PD000852 PHYCOBILISOME LINKER POLYPEPTIDE PHOTOSYNTHESIS ELECTRON REPEAT ANCHOR ROD-CORE CHLOROPLAST ROD 21 201 8.0E-103 T 11-10-2018 IPR001297 Phycobilisome linker domain GO:0015979|GO:0030089 syc0499_c 4b68ba442b6be92a45685c65cb1370c5 273 Gene3D G3DSA:1.10.3130.20 18 163 9.2E-59 T 11-10-2018 IPR038255 Phycobilisome linker domain superfamily syc1014_c 506c4cacb391ba3e92293206ba0643cb 253 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 16 246 2.3E-99 T 11-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 syc1014_c 506c4cacb391ba3e92293206ba0643cb 253 Gene3D G3DSA:3.40.1160.10 9 250 1.3E-82 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily syc1014_c 506c4cacb391ba3e92293206ba0643cb 253 SUPERFAMILY SSF53633 14 246 1.57E-73 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily syc1014_c 506c4cacb391ba3e92293206ba0643cb 253 Hamap MF_01220_B Uridylate kinase [pyrH]. 14 247 45.336 T 11-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 syc1014_c 506c4cacb391ba3e92293206ba0643cb 253 Pfam PF00696 Amino acid kinase family 17 226 3.7E-30 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 syc1014_c 506c4cacb391ba3e92293206ba0643cb 253 PIRSF PIRSF005650 11 253 7.7E-99 T 11-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 syc2421_c d2e582a518be2a7441b95bb25fb05a86 556 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 1 554 28.533 T 11-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 syc2421_c d2e582a518be2a7441b95bb25fb05a86 556 Pfam PF03814 Potassium-transporting ATPase A subunit 10 552 1.4E-210 T 11-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 syc2421_c d2e582a518be2a7441b95bb25fb05a86 556 PIRSF PIRSF001294 1 556 6.8E-218 T 11-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 syc2421_c d2e582a518be2a7441b95bb25fb05a86 556 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 9 553 1.2E-195 T 11-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 syc2470_c 87c126182ea98aa5676b9ec5d397a4e9 502 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 6 496 35.705 T 11-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 syc2470_c 87c126182ea98aa5676b9ec5d397a4e9 502 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 29 496 1.4E-171 T 11-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 syc2470_c 87c126182ea98aa5676b9ec5d397a4e9 502 SUPERFAMILY SSF53244 343 498 9.92E-53 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 syc2470_c 87c126182ea98aa5676b9ec5d397a4e9 502 Gene3D G3DSA:3.40.1190.10 113 347 3.8E-85 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 syc2470_c 87c126182ea98aa5676b9ec5d397a4e9 502 SUPERFAMILY SSF63418 7 111 9.02E-21 T 11-10-2018 IPR035911 MurE/MurF, N-terminal syc2470_c 87c126182ea98aa5676b9ec5d397a4e9 502 Pfam PF08245 Mur ligase middle domain 122 322 1.7E-54 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 syc2470_c 87c126182ea98aa5676b9ec5d397a4e9 502 Pfam PF01225 Mur ligase family, catalytic domain 31 99 5.9E-12 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 syc2470_c 87c126182ea98aa5676b9ec5d397a4e9 502 Gene3D G3DSA:3.90.190.20 350 502 4.9E-64 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 syc2470_c 87c126182ea98aa5676b9ec5d397a4e9 502 Pfam PF02875 Mur ligase family, glutamate ligase domain 343 429 6.1E-26 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 syc2470_c 87c126182ea98aa5676b9ec5d397a4e9 502 Gene3D G3DSA:3.40.1390.10 6 112 1.9E-19 T 11-10-2018 syc2470_c 87c126182ea98aa5676b9ec5d397a4e9 502 SUPERFAMILY SSF53623 113 340 3.53E-78 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 syc2131_d b21009da7a80adf14e7b767aaa7a7213 235 Gene3D G3DSA:1.10.357.140 1 114 2.1E-28 T 11-10-2018 syc2131_d b21009da7a80adf14e7b767aaa7a7213 235 Gene3D G3DSA:1.20.120.1780 115 234 3.5E-14 T 11-10-2018 syc2131_d b21009da7a80adf14e7b767aaa7a7213 235 Pfam PF01040 UbiA prenyltransferase family 2 203 2.2E-40 T 11-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 syc0764_d 3a87fa62cf48b6c240f463aa56481a94 197 Gene3D G3DSA:2.40.128.590 1 196 4.8E-64 T 11-10-2018 IPR038672 Chromophore lyase CpcT/CpeT superfamily syc0764_d 3a87fa62cf48b6c240f463aa56481a94 197 Hamap MF_01460 Chromophore lyase CpcT/CpeT [cpcT]. 1 193 30.242 T 11-10-2018 IPR010404 Chromophore lyase CpcT/CpeT GO:0016829|GO:0017009 syc0764_d 3a87fa62cf48b6c240f463aa56481a94 197 Pfam PF06206 CpeT/CpcT family (DUF1001) 7 189 1.3E-47 T 11-10-2018 IPR010404 Chromophore lyase CpcT/CpeT GO:0016829|GO:0017009 syc1187_d 4260ab6f260b6876dcf6eab02a2fbac0 161 Pfam PF00502 Phycobilisome protein 8 160 4.8E-58 T 11-10-2018 IPR012128 Phycobilisome, alpha/beta subunit GO:0015979|GO:0030089 syc1187_d 4260ab6f260b6876dcf6eab02a2fbac0 161 Gene3D G3DSA:1.10.490.20 1 161 5.3E-66 T 11-10-2018 IPR038719 Phycobilisome, alpha/beta subunit superfamily syc1187_d 4260ab6f260b6876dcf6eab02a2fbac0 161 SUPERFAMILY SSF46458 1 161 1.44E-54 T 11-10-2018 IPR009050 Globin-like superfamily syc1187_d 4260ab6f260b6876dcf6eab02a2fbac0 161 PIRSF PIRSF000081 1 161 1.2E-59 T 11-10-2018 IPR012128 Phycobilisome, alpha/beta subunit GO:0015979|GO:0030089 syc1187_d 4260ab6f260b6876dcf6eab02a2fbac0 161 TIGRFAM TIGR01337 apcB: allophycocyanin, beta subunit 2 161 9.2E-74 T 11-10-2018 IPR006245 Allophycocyanin, beta subunit GO:0015979|GO:0030089 syc1250_c 3e6ed60b62c33259cf051a22164678c7 306 PIRSF PIRSF004793 11 279 2.4E-84 T 11-10-2018 IPR014046 Diadenylate cyclase GO:0004016|GO:0006171 syc1250_c 3e6ed60b62c33259cf051a22164678c7 306 TIGRFAM TIGR00159 TIGR00159: TIGR00159 family protein 20 262 1.1E-81 T 11-10-2018 IPR034701 Diadenylate cyclase CdaA GO:0004016|GO:0006171 syc1250_c 3e6ed60b62c33259cf051a22164678c7 306 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 128 246 1.8E-39 T 11-10-2018 IPR003390 DNA integrity scanning protein, DisA, N-terminal syc1250_c 3e6ed60b62c33259cf051a22164678c7 306 SUPERFAMILY SSF143597 48 252 7.85E-56 T 11-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily syc1250_c 3e6ed60b62c33259cf051a22164678c7 306 Gene3D G3DSA:3.40.1700.10 113 266 1.3E-51 T 11-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily syc1250_c 3e6ed60b62c33259cf051a22164678c7 306 Hamap MF_01499 Diadenylate cyclase [dacA]. 18 266 29.039 T 11-10-2018 IPR034701 Diadenylate cyclase CdaA GO:0004016|GO:0006171 syc1380_d a983d15992fca52384b53d893d45a261 199 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 7 181 4.6E-31 T 11-10-2018 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 syc1380_d a983d15992fca52384b53d893d45a261 199 SUPERFAMILY SSF53335 3 197 2.46E-53 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase syc1380_d a983d15992fca52384b53d893d45a261 199 Gene3D G3DSA:3.40.50.150 1 199 1.0E-55 T 11-10-2018 syc2033_d 0b08934102218f2716903815a9b03e79 221 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 6 218 28.311 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 syc2033_d 0b08934102218f2716903815a9b03e79 221 SUPERFAMILY SSF51419 2 217 1.96E-69 T 11-10-2018 IPR029066 PLP-binding barrel syc2033_d 0b08934102218f2716903815a9b03e79 221 Gene3D G3DSA:3.20.20.10 1 221 3.5E-71 T 11-10-2018 IPR029066 PLP-binding barrel syc2033_d 0b08934102218f2716903815a9b03e79 221 Pfam PF01168 Alanine racemase, N-terminal domain 2 219 9.3E-27 T 11-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 syc2033_d 0b08934102218f2716903815a9b03e79 221 PIRSF PIRSF004848 1 221 3.7E-66 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 syc2033_d 0b08934102218f2716903815a9b03e79 221 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 13 219 2.0E-66 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 syc0964_c 45ea14396735edd1e0f7a79881b74b57 204 Pfam PF11833 Protein CHAPERONE-LIKE PROTEIN OF POR1-like 14 203 1.0E-60 T 11-10-2018 IPR021788 Protein CHAPERONE-LIKE PROTEIN OF POR1-like syc1893_d 276b3fe77c5515c8716b3fc48c9f5c57 77 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 2 69 28.042 T 11-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc1893_d 276b3fe77c5515c8716b3fc48c9f5c57 77 Pfam PF01197 Ribosomal protein L31 3 66 1.1E-24 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc1893_d 276b3fe77c5515c8716b3fc48c9f5c57 77 SUPERFAMILY SSF143800 3 68 1.77E-25 T 11-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc1893_d 276b3fe77c5515c8716b3fc48c9f5c57 77 TIGRFAM TIGR00105 L31: ribosomal protein bL31 3 67 9.9E-26 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc1893_d 276b3fe77c5515c8716b3fc48c9f5c57 77 PRINTS PR01249 Ribosomal protein L31 signature 32 47 5.8E-20 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc1893_d 276b3fe77c5515c8716b3fc48c9f5c57 77 PRINTS PR01249 Ribosomal protein L31 signature 3 20 5.8E-20 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc1893_d 276b3fe77c5515c8716b3fc48c9f5c57 77 PRINTS PR01249 Ribosomal protein L31 signature 47 65 5.8E-20 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc1893_d 276b3fe77c5515c8716b3fc48c9f5c57 77 ProSitePatterns PS01143 Ribosomal protein L31 signature. 36 57 - T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc1893_d 276b3fe77c5515c8716b3fc48c9f5c57 77 Gene3D G3DSA:2.30.170.50 2 70 1.9E-23 T 11-10-2018 syc0981_c eb4419d2232029f6cf975944e3929c9f 153 Pfam PF13470 PIN domain 14 126 3.3E-19 T 11-10-2018 IPR002716 PIN domain syc0981_c eb4419d2232029f6cf975944e3929c9f 153 SUPERFAMILY SSF88723 13 131 1.21E-11 T 11-10-2018 IPR029060 PIN-like domain superfamily syc0887_d 12b40f33beae5b65eecd1fec803c883d 137 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 130 9.2E-66 T 11-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 syc0887_d 12b40f33beae5b65eecd1fec803c883d 137 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 123 1.4E-25 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain syc0887_d 12b40f33beae5b65eecd1fec803c883d 137 SUPERFAMILY SSF54593 1 126 4.3E-38 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase syc0887_d 12b40f33beae5b65eecd1fec803c883d 137 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 11-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 syc0887_d 12b40f33beae5b65eecd1fec803c883d 137 Gene3D G3DSA:3.10.180.10 1 130 1.9E-50 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase syc2263_d 7a9b155e4fd9ddda1ffcce8e3264125a 387 Gene3D G3DSA:3.20.20.70 14 367 1.6E-90 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 syc2263_d 7a9b155e4fd9ddda1ffcce8e3264125a 387 TIGRFAM TIGR01304 IMP_DH_rel_2: IMP dehydrogenase family protein 3 366 6.7E-165 T 11-10-2018 IPR005992 IMP dehydrogenase-related 2 GO:0016491|GO:0055114 syc2263_d 7a9b155e4fd9ddda1ffcce8e3264125a 387 SMART SM01240 13 377 1.9E-70 T 11-10-2018 syc2263_d 7a9b155e4fd9ddda1ffcce8e3264125a 387 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 16 297 3.0E-45 T 11-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 syc2263_d 7a9b155e4fd9ddda1ffcce8e3264125a 387 SUPERFAMILY SSF51412 6 376 4.27E-72 T 11-10-2018 syc0104_c 855d94d4ffca68129ad6635e98fd23f0 218 Pfam PF00072 Response regulator receiver domain 3 91 9.6E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 syc0104_c 855d94d4ffca68129ad6635e98fd23f0 218 Gene3D G3DSA:1.10.10.10 100 211 1.3E-34 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily syc0104_c 855d94d4ffca68129ad6635e98fd23f0 218 SUPERFAMILY SSF52172 3 150 5.29E-36 T 11-10-2018 IPR011006 CheY-like superfamily syc0104_c 855d94d4ffca68129ad6635e98fd23f0 218 Pfam PF00486 Transcriptional regulatory protein, C terminal 130 207 3.6E-27 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 syc0104_c 855d94d4ffca68129ad6635e98fd23f0 218 SMART SM00448 1 90 1.9E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 syc0104_c 855d94d4ffca68129ad6635e98fd23f0 218 SMART SM00862 129 207 8.9E-27 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 syc0104_c 855d94d4ffca68129ad6635e98fd23f0 218 Gene3D G3DSA:3.40.50.2300 1 99 2.7E-33 T 11-10-2018 syc2219_d a7a42a040298cd4da87e8f5c5a5ebb56 466 PIRSF PIRSF004919 6 464 9.2E-147 T 11-10-2018 IPR025502 TldD syc2219_d a7a42a040298cd4da87e8f5c5a5ebb56 466 SUPERFAMILY SSF111283 9 461 3.27E-109 T 11-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 syc2219_d a7a42a040298cd4da87e8f5c5a5ebb56 466 Gene3D G3DSA:3.30.2290.10 5 223 8.9E-16 T 11-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal syc2219_d a7a42a040298cd4da87e8f5c5a5ebb56 466 Pfam PF01523 Putative modulator of DNA gyrase 27 316 1.2E-52 T 11-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 syc2339_d b05d07c23efd23e6bb5cdc112e2788b0 250 SMART SM00185 83 124 1.3 T 11-10-2018 IPR000225 Armadillo GO:0005515 syc2339_d b05d07c23efd23e6bb5cdc112e2788b0 250 SMART SM00185 152 193 7.9 T 11-10-2018 IPR000225 Armadillo GO:0005515 syc2339_d b05d07c23efd23e6bb5cdc112e2788b0 250 Gene3D G3DSA:1.25.10.10 160 247 1.7E-11 T 11-10-2018 IPR011989 Armadillo-like helical syc2339_d b05d07c23efd23e6bb5cdc112e2788b0 250 SUPERFAMILY SSF48371 16 232 1.58E-33 T 11-10-2018 IPR016024 Armadillo-type fold syc2339_d b05d07c23efd23e6bb5cdc112e2788b0 250 Pfam PF13646 HEAT repeats 165 245 8.0E-10 T 11-10-2018 syc2339_d b05d07c23efd23e6bb5cdc112e2788b0 250 Pfam PF13646 HEAT repeats 36 120 1.5E-16 T 11-10-2018 syc2339_d b05d07c23efd23e6bb5cdc112e2788b0 250 SMART SM00567 E-Z type HEAT repeats 46 75 0.0059 T 11-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 syc2339_d b05d07c23efd23e6bb5cdc112e2788b0 250 SMART SM00567 E-Z type HEAT repeats 140 175 320.0 T 11-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 syc2339_d b05d07c23efd23e6bb5cdc112e2788b0 250 SMART SM00567 E-Z type HEAT repeats 218 247 89.0 T 11-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 syc2339_d b05d07c23efd23e6bb5cdc112e2788b0 250 SMART SM00567 E-Z type HEAT repeats 178 215 22.0 T 11-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 syc2339_d b05d07c23efd23e6bb5cdc112e2788b0 250 SMART SM00567 E-Z type HEAT repeats 77 106 0.047 T 11-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 syc2339_d b05d07c23efd23e6bb5cdc112e2788b0 250 SMART SM00567 E-Z type HEAT repeats 109 138 0.0015 T 11-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 syc2339_d b05d07c23efd23e6bb5cdc112e2788b0 250 Gene3D G3DSA:1.25.10.110 93 159 4.5E-16 T 11-10-2018 syc2339_d b05d07c23efd23e6bb5cdc112e2788b0 250 Gene3D G3DSA:1.25.10.110 21 92 1.2E-10 T 11-10-2018 syc0939_d 22c6beb881ae07970d9bc62efadec1ef 241 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 63 233 1.0E-67 T 11-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 syc0939_d 22c6beb881ae07970d9bc62efadec1ef 241 Gene3D G3DSA:3.30.70.260 139 217 2.1E-87 T 11-10-2018 syc0939_d 22c6beb881ae07970d9bc62efadec1ef 241 SUPERFAMILY SSF100950 14 155 9.67E-47 T 11-10-2018 IPR037171 NagB/RpiA transferase-like syc0939_d 22c6beb881ae07970d9bc62efadec1ef 241 SUPERFAMILY SSF75445 143 220 4.84E-24 T 11-10-2018 syc0939_d 22c6beb881ae07970d9bc62efadec1ef 241 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 13 237 35.204 T 11-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 syc0939_d 22c6beb881ae07970d9bc62efadec1ef 241 Gene3D G3DSA:3.40.50.1360 17 233 2.1E-87 T 11-10-2018 syc0939_d 22c6beb881ae07970d9bc62efadec1ef 241 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 17 233 4.6E-81 T 11-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 syc1548_c b025a880b5b869c22ddefc900cef1ed4 411 Pfam PF06838 Methionine gamma-lyase 7 408 2.6E-203 T 11-10-2018 IPR009651 Putative methionine gamma-lyase syc1548_c b025a880b5b869c22ddefc900cef1ed4 411 Gene3D G3DSA:3.40.640.10 52 265 3.9E-169 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 syc1548_c b025a880b5b869c22ddefc900cef1ed4 411 Gene3D G3DSA:3.90.1150.60 11 404 3.9E-169 T 11-10-2018 syc1548_c b025a880b5b869c22ddefc900cef1ed4 411 SUPERFAMILY SSF53383 33 380 5.57E-44 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase syc2506_d 088649ef363706cfd3699c43eeb2d95a 265 SUPERFAMILY SSF51556 1 257 4.94E-78 T 11-10-2018 IPR032466 Metal-dependent hydrolase syc2506_d 088649ef363706cfd3699c43eeb2d95a 265 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 192 208 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 syc2506_d 088649ef363706cfd3699c43eeb2d95a 265 Pfam PF01026 TatD related DNase 4 255 1.6E-68 T 11-10-2018 IPR001130 TatD family GO:0016788 syc2506_d 088649ef363706cfd3699c43eeb2d95a 265 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 syc2506_d 088649ef363706cfd3699c43eeb2d95a 265 Gene3D G3DSA:3.20.20.140 1 258 1.3E-79 T 11-10-2018 syc2506_d 088649ef363706cfd3699c43eeb2d95a 265 PIRSF PIRSF005902 1 260 1.3E-68 T 11-10-2018 IPR001130 TatD family GO:0016788 syc2506_d 088649ef363706cfd3699c43eeb2d95a 265 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 3 256 2.8E-77 T 11-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 syc2506_d 088649ef363706cfd3699c43eeb2d95a 265 Hamap MF_02048 D-aminoacyl-tRNA deacylase [dtd3]. 2 258 55.969 T 11-10-2018 IPR033665 D-aminoacyl-tRNA deacylase DTD3 syc0100_c 0add91df2774fe69510c09d05bcac1a9 225 SMART SM00563 59 171 3.3E-35 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 syc0100_c 0add91df2774fe69510c09d05bcac1a9 225 SUPERFAMILY SSF69593 25 221 2.35E-55 T 11-10-2018 syc0100_c 0add91df2774fe69510c09d05bcac1a9 225 Pfam PF01553 Acyltransferase 46 168 1.9E-24 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 syc0100_c 0add91df2774fe69510c09d05bcac1a9 225 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 48 168 2.1E-33 T 11-10-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 syc0851_c 016f2e93bcce455d3b864a89f98aacf1 211 SMART SM00474 7 179 1.3E-40 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 syc0851_c 016f2e93bcce455d3b864a89f98aacf1 211 Gene3D G3DSA:3.30.420.10 9 195 9.3E-46 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 syc0851_c 016f2e93bcce455d3b864a89f98aacf1 211 SUPERFAMILY SSF53098 17 201 4.91E-52 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily syc0851_c 016f2e93bcce455d3b864a89f98aacf1 211 Pfam PF01612 3'-5' exonuclease 13 179 8.4E-41 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 syc0334_d 8de08c8ea2b6e2f9d75f5650f487e1d0 519 Gene3D G3DSA:3.40.50.300 18 251 2.4E-72 T 11-10-2018 syc0334_d 8de08c8ea2b6e2f9d75f5650f487e1d0 519 SUPERFAMILY SSF52540 18 248 1.2E-38 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0334_d 8de08c8ea2b6e2f9d75f5650f487e1d0 519 Hamap MF_01836 Circadian clock protein kinase KaiC [kaiC]. 5 515 74.992 T 11-10-2018 IPR013503 Circadian clock KaiC, bacteria GO:0000287|GO:0003677|GO:0004674|GO:0005524|GO:0006355|GO:0042752 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 syc0334_d 8de08c8ea2b6e2f9d75f5650f487e1d0 519 SUPERFAMILY SSF52540 256 490 1.09E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0334_d 8de08c8ea2b6e2f9d75f5650f487e1d0 519 Pfam PF06745 KaiC 263 479 4.0E-39 T 11-10-2018 IPR014774 KaiC-like domain syc0334_d 8de08c8ea2b6e2f9d75f5650f487e1d0 519 Pfam PF06745 KaiC 22 248 5.5E-81 T 11-10-2018 IPR014774 KaiC-like domain syc0334_d 8de08c8ea2b6e2f9d75f5650f487e1d0 519 Gene3D G3DSA:3.40.50.300 252 500 1.0E-66 T 11-10-2018 syc0334_d 8de08c8ea2b6e2f9d75f5650f487e1d0 519 TIGRFAM TIGR02655 circ_KaiC: circadian clock protein KaiC 20 502 0.0 T 11-10-2018 IPR013503 Circadian clock KaiC, bacteria GO:0000287|GO:0003677|GO:0004674|GO:0005524|GO:0006355|GO:0042752 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 syc0334_d 8de08c8ea2b6e2f9d75f5650f487e1d0 519 PIRSF PIRSF039117 6 509 4.7E-159 T 11-10-2018 IPR030665 Circadian clock protein kinase KaiC KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 syc2310_c b7c8cd23aaad1199744ae1cd77b7ef84 955 Pfam PF03699 Uncharacterised protein family (UPF0182) 10 863 1.4E-271 T 11-10-2018 IPR005372 Uncharacterised protein family UPF0182 GO:0016021 syc2310_c b7c8cd23aaad1199744ae1cd77b7ef84 955 Hamap MF_01600 UPF0182 protein . 3 938 18.892 T 11-10-2018 IPR005372 Uncharacterised protein family UPF0182 GO:0016021 syc0089_d 2aafb8681f3bcac4cea99fb7a4da65c9 111 Hamap MF_00594 Cytochrome c6 [petJ]. 25 109 30.698 T 11-10-2018 IPR023655 Cytochrome c6 GO:0005506|GO:0009055 syc0089_d 2aafb8681f3bcac4cea99fb7a4da65c9 111 SUPERFAMILY SSF46626 1 110 1.43E-28 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 syc0089_d 2aafb8681f3bcac4cea99fb7a4da65c9 111 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 25 101 2.6E-16 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 syc0089_d 2aafb8681f3bcac4cea99fb7a4da65c9 111 PRINTS PR00605 Class IC cytochrome C signature 36 47 2.3E-12 T 11-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 syc0089_d 2aafb8681f3bcac4cea99fb7a4da65c9 111 PRINTS PR00605 Class IC cytochrome C signature 79 101 2.3E-12 T 11-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 syc0089_d 2aafb8681f3bcac4cea99fb7a4da65c9 111 Gene3D G3DSA:1.10.760.10 25 111 5.4E-35 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 syc2125_d f1519ce7514ec44100510e40198cc335 395 SUPERFAMILY SSF55031 183 300 6.67E-30 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain syc2125_d f1519ce7514ec44100510e40198cc335 395 Gene3D G3DSA:3.40.630.10 17 374 3.0E-134 T 11-10-2018 syc2125_d f1519ce7514ec44100510e40198cc335 395 Gene3D G3DSA:3.30.70.360 183 297 3.0E-134 T 11-10-2018 syc2125_d f1519ce7514ec44100510e40198cc335 395 PIRSF PIRSF005962 1 391 1.6E-120 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 syc2125_d f1519ce7514ec44100510e40198cc335 395 Pfam PF07687 Peptidase dimerisation domain 188 284 2.2E-15 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain syc2125_d f1519ce7514ec44100510e40198cc335 395 SUPERFAMILY SSF53187 4 389 8.68E-86 T 11-10-2018 syc2125_d f1519ce7514ec44100510e40198cc335 395 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 17 377 6.3E-126 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 syc2125_d f1519ce7514ec44100510e40198cc335 395 Pfam PF01546 Peptidase family M20/M25/M40 75 382 2.8E-34 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 syc2349_c 0bcb9098c24d3e1f511a44140b7588ed 339 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 104 2.2E-36 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc2349_c 0bcb9098c24d3e1f511a44140b7588ed 339 Gene3D G3DSA:3.40.50.720 4 329 8.9E-152 T 11-10-2018 syc2349_c 0bcb9098c24d3e1f511a44140b7588ed 339 Gene3D G3DSA:3.30.360.10 154 318 8.9E-152 T 11-10-2018 syc2349_c 0bcb9098c24d3e1f511a44140b7588ed 339 SUPERFAMILY SSF51735 3 171 1.66E-59 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily syc2349_c 0bcb9098c24d3e1f511a44140b7588ed 339 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 153 160 - T 11-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc2349_c 0bcb9098c24d3e1f511a44140b7588ed 339 SUPERFAMILY SSF55347 155 317 3.06E-70 T 11-10-2018 syc2349_c 0bcb9098c24d3e1f511a44140b7588ed 339 SMART SM00846 3 155 2.5E-82 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc2349_c 0bcb9098c24d3e1f511a44140b7588ed 339 PIRSF PIRSF000149 1 337 2.9E-127 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc2349_c 0bcb9098c24d3e1f511a44140b7588ed 339 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 328 3.2E-133 T 11-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc2349_c 0bcb9098c24d3e1f511a44140b7588ed 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 111 124 8.4E-40 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc2349_c 0bcb9098c24d3e1f511a44140b7588ed 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 272 287 8.4E-40 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc2349_c 0bcb9098c24d3e1f511a44140b7588ed 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 232 249 8.4E-40 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc2349_c 0bcb9098c24d3e1f511a44140b7588ed 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 149 167 8.4E-40 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc2349_c 0bcb9098c24d3e1f511a44140b7588ed 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 176 192 8.4E-40 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc2349_c 0bcb9098c24d3e1f511a44140b7588ed 339 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 160 316 4.7E-68 T 11-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc0342_d 6d7c4640607d7eba18b9e3446ada0a8b 84 SUPERFAMILY SSF143120 1 81 8.24E-24 T 11-10-2018 IPR036165 YefM-like superfamily syc0342_d 6d7c4640607d7eba18b9e3446ada0a8b 84 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 3 51 1.5E-8 T 11-10-2018 syc0342_d 6d7c4640607d7eba18b9e3446ada0a8b 84 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 73 6.8E-23 T 11-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM syc0342_d 6d7c4640607d7eba18b9e3446ada0a8b 84 Gene3D G3DSA:3.40.1620.10 1 40 7.2E-11 T 11-10-2018 syc0342_d 6d7c4640607d7eba18b9e3446ada0a8b 84 Gene3D G3DSA:1.10.1220.170 41 84 2.4E-11 T 11-10-2018 syc0438_d 708180ac1866684bde8e9b87e1e5061d 527 Pfam PF00069 Protein kinase domain 12 219 2.3E-27 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 syc0438_d 708180ac1866684bde8e9b87e1e5061d 527 Gene3D G3DSA:1.10.510.10 100 267 3.0E-51 T 11-10-2018 syc0438_d 708180ac1866684bde8e9b87e1e5061d 527 Gene3D G3DSA:3.30.200.20 3 99 3.0E-51 T 11-10-2018 syc0438_d 708180ac1866684bde8e9b87e1e5061d 527 SUPERFAMILY SSF56112 6 317 2.83E-48 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily syc0438_d 708180ac1866684bde8e9b87e1e5061d 527 SMART SM00220 11 267 1.2E-25 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 syc0654_d 58b034c9a121f983f2a6e99c72d6f1c4 156 Gene3D G3DSA:1.10.455.10 2 156 3.6E-59 T 11-10-2018 IPR036823 Ribosomal protein S7 domain superfamily syc0654_d 58b034c9a121f983f2a6e99c72d6f1c4 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 5.1E-62 T 11-10-2018 IPR023798 Ribosomal protein S7 domain syc0654_d 58b034c9a121f983f2a6e99c72d6f1c4 156 SUPERFAMILY SSF47973 5 149 1.29E-59 T 11-10-2018 IPR036823 Ribosomal protein S7 domain superfamily syc0654_d 58b034c9a121f983f2a6e99c72d6f1c4 156 PIRSF PIRSF002122 1 156 1.1E-55 T 11-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 syc0654_d 58b034c9a121f983f2a6e99c72d6f1c4 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 11-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc0654_d 58b034c9a121f983f2a6e99c72d6f1c4 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.195 T 11-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 syc0654_d 58b034c9a121f983f2a6e99c72d6f1c4 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 1.3E-65 T 11-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 syc1989_d 9e1d76886c408b23c9a1b25c3394f1bd 146 PRINTS PR01693 Cyanase signature 13 28 1.1E-37 T 11-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 syc1989_d 9e1d76886c408b23c9a1b25c3394f1bd 146 PRINTS PR01693 Cyanase signature 131 141 1.1E-37 T 11-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 syc1989_d 9e1d76886c408b23c9a1b25c3394f1bd 146 PRINTS PR01693 Cyanase signature 33 50 1.1E-37 T 11-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 syc1989_d 9e1d76886c408b23c9a1b25c3394f1bd 146 PRINTS PR01693 Cyanase signature 100 116 1.1E-37 T 11-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 syc1989_d 9e1d76886c408b23c9a1b25c3394f1bd 146 PRINTS PR01693 Cyanase signature 82 96 1.1E-37 T 11-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 syc1989_d 9e1d76886c408b23c9a1b25c3394f1bd 146 Gene3D G3DSA:3.30.1160.10 80 146 3.7E-33 T 11-10-2018 IPR036581 Cyanate lyase, C-terminal domain superfamily GO:0009439 KEGG: 00910+4.2.1.104 syc1989_d 9e1d76886c408b23c9a1b25c3394f1bd 146 SMART SM01116 74 146 8.7E-49 T 11-10-2018 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00910+4.2.1.104 syc1989_d 9e1d76886c408b23c9a1b25c3394f1bd 146 Pfam PF02560 Cyanate lyase C-terminal domain 78 145 5.4E-35 T 11-10-2018 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00910+4.2.1.104 syc1989_d 9e1d76886c408b23c9a1b25c3394f1bd 146 SUPERFAMILY SSF47413 4 76 5.2E-16 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 syc1989_d 9e1d76886c408b23c9a1b25c3394f1bd 146 PIRSF PIRSF001263 1 146 2.5E-66 T 11-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 syc1989_d 9e1d76886c408b23c9a1b25c3394f1bd 146 SUPERFAMILY SSF55234 79 146 2.35E-30 T 11-10-2018 IPR036581 Cyanate lyase, C-terminal domain superfamily GO:0009439 KEGG: 00910+4.2.1.104 syc1989_d 9e1d76886c408b23c9a1b25c3394f1bd 146 Hamap MF_00535 Cyanate hydratase [cynS]. 1 146 74.826 T 11-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 syc1989_d 9e1d76886c408b23c9a1b25c3394f1bd 146 TIGRFAM TIGR00673 cynS: cyanase 3 146 3.6E-63 T 11-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 syc1989_d 9e1d76886c408b23c9a1b25c3394f1bd 146 Gene3D G3DSA:1.10.260.40 2 79 7.8E-22 T 11-10-2018 syc1718_d 4d1e3bab6e7c9b33d9aaf0ab14aac074 671 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 576 656 1.3E-9 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 syc1718_d 4d1e3bab6e7c9b33d9aaf0ab14aac074 671 Gene3D G3DSA:1.10.760.10 569 670 1.6E-30 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 syc1718_d 4d1e3bab6e7c9b33d9aaf0ab14aac074 671 SUPERFAMILY SSF46626 566 663 1.06E-17 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 syc1718_d 4d1e3bab6e7c9b33d9aaf0ab14aac074 671 Gene3D G3DSA:1.10.760.10 437 561 6.9E-19 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 syc1718_d 4d1e3bab6e7c9b33d9aaf0ab14aac074 671 SUPERFAMILY SSF46626 439 554 2.83E-15 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 syc1001_c cfc8017c990ca0ff805512314642562d 179 PIRSF PIRSF020893 3 179 3.6E-71 T 11-10-2018 IPR016780 Uncharacterised conserved protein UCP020893 syc0415_d 906bb3c07412ec009a683e5274418f79 172 SUPERFAMILY SSF110857 5 121 8.24E-12 T 11-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily syc0415_d 906bb3c07412ec009a683e5274418f79 172 Gene3D G3DSA:3.10.490.10 2 160 1.3E-16 T 11-10-2018 syc0415_d 906bb3c07412ec009a683e5274418f79 172 Pfam PF04752 ChaC-like protein 6 171 1.4E-53 T 11-10-2018 IPR006840 Glutathione-specific gamma-glutamylcyclotransferase GO:0003839|GO:0006751 KEGG: 00480+4.3.2.7|MetaCyc: PWY-7942|Reactome: R-HSA-174403 syc1064_d 8adc87425b40c3934d8f7a38a967a4fc 251 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 251 41.497 T 11-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 syc1064_d 8adc87425b40c3934d8f7a38a967a4fc 251 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 8 242 3.7E-50 T 11-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 syc1064_d 8adc87425b40c3934d8f7a38a967a4fc 251 Pfam PF02654 Cobalamin-5-phosphate synthase 12 243 8.7E-53 T 11-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 syc2317_c 15a7c74b30c8695dce9d74cbc4fa299a 321 Gene3D G3DSA:3.40.50.300 106 312 4.5E-73 T 11-10-2018 syc2317_c 15a7c74b30c8695dce9d74cbc4fa299a 321 SUPERFAMILY SSF52540 109 270 7.27E-34 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc2317_c 15a7c74b30c8695dce9d74cbc4fa299a 321 Pfam PF02562 PhoH-like protein 109 312 1.3E-91 T 11-10-2018 IPR003714 PhoH-like protein GO:0005524 syc0353_d 7868724f85c8822bec216cfb0c9a0cf8 295 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 30 290 35.401 T 11-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 syc0353_d 7868724f85c8822bec216cfb0c9a0cf8 295 Gene3D G3DSA:3.20.20.70 24 295 4.2E-105 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 syc0353_d 7868724f85c8822bec216cfb0c9a0cf8 295 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 82 100 - T 11-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 syc0353_d 7868724f85c8822bec216cfb0c9a0cf8 295 SUPERFAMILY SSF51366 39 290 1.41E-83 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 syc0353_d 7868724f85c8822bec216cfb0c9a0cf8 295 Pfam PF00218 Indole-3-glycerol phosphate synthase 32 288 8.5E-87 T 11-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 syc1252_d 46b3d873fc415c0b9be3f5fdeb93e32a 199 Gene3D G3DSA:3.40.630.30 9 170 4.9E-28 T 11-10-2018 syc1252_d 46b3d873fc415c0b9be3f5fdeb93e32a 199 SUPERFAMILY SSF55729 10 137 1.16E-26 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase syc1252_d 46b3d873fc415c0b9be3f5fdeb93e32a 199 Pfam PF13673 Acetyltransferase (GNAT) domain 36 131 9.5E-12 T 11-10-2018 IPR000182 GNAT domain syc1252_d 46b3d873fc415c0b9be3f5fdeb93e32a 199 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 22 145 5.1E-28 T 11-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 syc2227_c 1664b639ec101f8b59dc264b535c32fe 305 SUPERFAMILY SSF48173 51 273 7.59E-60 T 11-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 syc2227_c 1664b639ec101f8b59dc264b535c32fe 305 Gene3D G3DSA:1.10.579.10 141 259 9.2E-29 T 11-10-2018 syc2227_c 1664b639ec101f8b59dc264b535c32fe 305 Gene3D G3DSA:1.25.40.80 4 140 2.8E-14 T 11-10-2018 syc2227_c 1664b639ec101f8b59dc264b535c32fe 305 Pfam PF03441 FAD binding domain of DNA photolyase 119 241 1.3E-22 T 11-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 syc1286_c 781c892b7462d563546e7b624e7224d1 208 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 114 124 - T 11-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 syc1286_c 781c892b7462d563546e7b624e7224d1 208 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 7 198 3.9E-66 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 syc1286_c 781c892b7462d563546e7b624e7224d1 208 Pfam PF01195 Peptidyl-tRNA hydrolase 8 197 9.2E-57 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 syc1286_c 781c892b7462d563546e7b624e7224d1 208 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 19 32 - T 11-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 syc1286_c 781c892b7462d563546e7b624e7224d1 208 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 6 190 35.092 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 syc1286_c 781c892b7462d563546e7b624e7224d1 208 Gene3D G3DSA:3.40.50.1470 7 201 1.3E-66 T 11-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 syc1286_c 781c892b7462d563546e7b624e7224d1 208 SUPERFAMILY SSF53178 7 198 5.23E-64 T 11-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 syc0902_c 275e1cff8a8e67e372824c6fd906c5e5 665 ProSitePatterns PS00211 ABC transporters family signature. 579 593 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 syc0902_c 275e1cff8a8e67e372824c6fd906c5e5 665 SUPERFAMILY SSF90123 120 424 1.96E-28 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 syc0902_c 275e1cff8a8e67e372824c6fd906c5e5 665 SUPERFAMILY SSF52540 441 645 2.47E-34 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0902_c 275e1cff8a8e67e372824c6fd906c5e5 665 Pfam PF06472 ABC transporter transmembrane region 2 117 378 6.7E-67 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 syc0902_c 275e1cff8a8e67e372824c6fd906c5e5 665 Gene3D G3DSA:1.20.1560.10 116 426 3.8E-9 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 syc0902_c 275e1cff8a8e67e372824c6fd906c5e5 665 Gene3D G3DSA:3.40.50.300 450 662 2.0E-37 T 11-10-2018 syc0902_c 275e1cff8a8e67e372824c6fd906c5e5 665 SMART SM00382 477 659 3.2E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain syc0902_c 275e1cff8a8e67e372824c6fd906c5e5 665 Pfam PF00005 ABC transporter 469 606 9.8E-17 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 syc0332_d 88b9220a53314ac214fb7d6c3e9c7814 284 SUPERFAMILY SSF101215 178 283 7.06E-51 T 11-10-2018 IPR017944 KaiA/RbsU helical domain superfamily GO:0006468 syc0332_d 88b9220a53314ac214fb7d6c3e9c7814 284 SMART SM01247 5 283 2.1E-186 T 11-10-2018 IPR011648 Circadian clock protein KaiA GO:0006468|GO:0007623 syc0332_d 88b9220a53314ac214fb7d6c3e9c7814 284 Pfam PF07688 KaiA C-terminal domain 162 283 5.7E-63 T 11-10-2018 IPR020856 Circadian clock protein KaiA, C-terminal GO:0006468|GO:0007623 syc0332_d 88b9220a53314ac214fb7d6c3e9c7814 284 SUPERFAMILY SSF52172 3 133 6.96E-26 T 11-10-2018 IPR011006 CheY-like superfamily syc0332_d 88b9220a53314ac214fb7d6c3e9c7814 284 Gene3D G3DSA:3.40.50.2300 1 167 1.8E-58 T 11-10-2018 syc0332_d 88b9220a53314ac214fb7d6c3e9c7814 284 Gene3D G3DSA:1.10.1240.30 168 284 6.9E-58 T 11-10-2018 IPR017944 KaiA/RbsU helical domain superfamily GO:0006468 syc0850_c 896ca4cb120f1da915771da6001fffaf 107 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 3 72 6.6E-18 T 11-10-2018 IPR000504 RNA recognition motif domain GO:0003676 syc0850_c 896ca4cb120f1da915771da6001fffaf 107 SUPERFAMILY SSF54928 2 105 1.61E-31 T 11-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 syc0850_c 896ca4cb120f1da915771da6001fffaf 107 SMART SM00360 2 75 1.6E-22 T 11-10-2018 IPR000504 RNA recognition motif domain GO:0003676 syc0850_c 896ca4cb120f1da915771da6001fffaf 107 Gene3D G3DSA:3.30.70.330 1 106 1.0E-28 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily syc1231_d 8f4bf35020501a50373c9b7dad10f8fe 384 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 1 374 47.01 T 11-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 syc1231_d 8f4bf35020501a50373c9b7dad10f8fe 384 Gene3D G3DSA:3.90.1150.10 247 350 3.0E-174 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 syc1231_d 8f4bf35020501a50373c9b7dad10f8fe 384 Gene3D G3DSA:3.40.640.10 1 246 3.0E-174 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 syc1231_d 8f4bf35020501a50373c9b7dad10f8fe 384 SUPERFAMILY SSF53383 1 375 1.61E-170 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase syc1231_d 8f4bf35020501a50373c9b7dad10f8fe 384 Pfam PF00464 Serine hydroxymethyltransferase 1 343 1.5E-163 T 11-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 syc1231_d 8f4bf35020501a50373c9b7dad10f8fe 384 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 180 196 - T 11-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 syc1231_d 8f4bf35020501a50373c9b7dad10f8fe 384 PIRSF PIRSF000412 1 377 3.5E-155 T 11-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 syc1821_c 24ec83ac84ddc9bf0104927916fcc017 470 SUPERFAMILY SSF111352 50 446 9.02E-111 T 11-10-2018 syc1821_c 24ec83ac84ddc9bf0104927916fcc017 470 Pfam PF00909 Ammonium Transporter Family 55 466 7.4E-109 T 11-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 syc1821_c 24ec83ac84ddc9bf0104927916fcc017 470 Gene3D G3DSA:1.10.3430.10 28 470 4.4E-132 T 11-10-2018 IPR029020 Ammonium/urea transporter syc1821_c 24ec83ac84ddc9bf0104927916fcc017 470 ProSitePatterns PS01219 Ammonium transporters signature. 217 242 - T 11-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 syc1821_c 24ec83ac84ddc9bf0104927916fcc017 470 TIGRFAM TIGR00836 amt: ammonium transporter 52 466 4.8E-125 T 11-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 syc1596_c e629a9e145baf98469c18b387055cdae 70 Gene3D G3DSA:2.40.50.140 1 69 1.7E-21 T 11-10-2018 syc1596_c e629a9e145baf98469c18b387055cdae 70 Pfam PF01176 Translation initiation factor 1A / IF-1 2 67 6.0E-19 T 11-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 syc1596_c e629a9e145baf98469c18b387055cdae 70 SUPERFAMILY SSF50249 2 68 5.78E-17 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold syc1596_c e629a9e145baf98469c18b387055cdae 70 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 2 68 1.9E-18 T 11-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 syc1178_c dc5ab37477abefb522f25a755fcbfcaf 180 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 140 159 - T 11-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 syc1178_c dc5ab37477abefb522f25a755fcbfcaf 180 Gene3D G3DSA:1.10.520.20 7 100 5.2E-11 T 11-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 syc1178_c dc5ab37477abefb522f25a755fcbfcaf 180 SUPERFAMILY SSF47928 5 107 1.23E-22 T 11-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 syc1178_c dc5ab37477abefb522f25a755fcbfcaf 180 PRINTS PR00125 ATP synthase delta subunit signature 138 153 9.1E-28 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 syc1178_c dc5ab37477abefb522f25a755fcbfcaf 180 PRINTS PR00125 ATP synthase delta subunit signature 76 87 9.1E-28 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 syc1178_c dc5ab37477abefb522f25a755fcbfcaf 180 PRINTS PR00125 ATP synthase delta subunit signature 87 101 9.1E-28 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 syc1178_c dc5ab37477abefb522f25a755fcbfcaf 180 PRINTS PR00125 ATP synthase delta subunit signature 153 171 9.1E-28 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 syc1178_c dc5ab37477abefb522f25a755fcbfcaf 180 PRINTS PR00125 ATP synthase delta subunit signature 7 26 9.1E-28 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 syc1178_c dc5ab37477abefb522f25a755fcbfcaf 180 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 180 20.169 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 syc1178_c dc5ab37477abefb522f25a755fcbfcaf 180 Pfam PF00213 ATP synthase delta (OSCP) subunit 9 176 2.1E-50 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 syc1178_c dc5ab37477abefb522f25a755fcbfcaf 180 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 9 177 1.6E-45 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 syc0541_d e517f8662208d28059578e43ab4c708d 105 SUPERFAMILY SSF51182 26 101 7.0E-15 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily syc0541_d e517f8662208d28059578e43ab4c708d 105 Gene3D G3DSA:2.60.120.10 10 102 2.8E-33 T 11-10-2018 IPR014710 RmlC-like jelly roll fold syc0541_d e517f8662208d28059578e43ab4c708d 105 Pfam PF07883 Cupin domain 27 98 5.3E-8 T 11-10-2018 IPR013096 Cupin 2, conserved barrel syc2433_d 09b9ab6d6608597a4efbc4184ff6d977 398 Gene3D G3DSA:3.40.50.1970 23 181 1.8E-38 T 11-10-2018 syc2433_d 09b9ab6d6608597a4efbc4184ff6d977 398 SUPERFAMILY SSF56796 24 378 1.44E-76 T 11-10-2018 syc2433_d 09b9ab6d6608597a4efbc4184ff6d977 398 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 172 200 - T 11-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 syc2433_d 09b9ab6d6608597a4efbc4184ff6d977 398 PIRSF PIRSF000112 20 380 3.0E-85 T 11-10-2018 IPR016205 Glycerol dehydrogenase GO:0016614|GO:0046872|GO:0055114 KEGG: 00564+1.1.1.261|MetaCyc: PWY-6349 syc2433_d 09b9ab6d6608597a4efbc4184ff6d977 398 Pfam PF00465 Iron-containing alcohol dehydrogenase 29 368 3.7E-59 T 11-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 syc2433_d 09b9ab6d6608597a4efbc4184ff6d977 398 Gene3D G3DSA:1.20.1090.10 182 396 1.9E-60 T 11-10-2018 syc2113_c 74a2259c347de1ae5a45771a2b9da3a8 474 SUPERFAMILY SSF51905 1 455 1.77E-61 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc2113_c 74a2259c347de1ae5a45771a2b9da3a8 474 TIGRFAM TIGR02731 phytoene_desat: phytoene desaturase 2 453 9.6E-270 T 11-10-2018 IPR014102 Phytoene desaturase GO:0016117|GO:0016166 syc2113_c 74a2259c347de1ae5a45771a2b9da3a8 474 Gene3D G3DSA:3.50.50.60 1 463 4.7E-36 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc2113_c 74a2259c347de1ae5a45771a2b9da3a8 474 Pfam PF01593 Flavin containing amine oxidoreductase 10 454 1.2E-83 T 11-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 syc2113_c 74a2259c347de1ae5a45771a2b9da3a8 474 PRINTS PR00419 Adrenodoxin reductase family signature 25 38 1.1E-5 T 11-10-2018 syc2113_c 74a2259c347de1ae5a45771a2b9da3a8 474 PRINTS PR00419 Adrenodoxin reductase family signature 2 24 1.1E-5 T 11-10-2018 syc1467_c 026f4bdc232dcf1e39b387249ab544ad 210 SUPERFAMILY SSF52540 9 197 2.51E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc1467_c 026f4bdc232dcf1e39b387249ab544ad 210 Gene3D G3DSA:3.40.50.300 8 201 2.0E-51 T 11-10-2018 syc1467_c 026f4bdc232dcf1e39b387249ab544ad 210 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 7 196 27.482 T 11-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 syc1467_c 026f4bdc232dcf1e39b387249ab544ad 210 PIRSF PIRSF006755 7 210 3.8E-51 T 11-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 syc1467_c 026f4bdc232dcf1e39b387249ab544ad 210 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 11 166 1.6E-40 T 11-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 syc1467_c 026f4bdc232dcf1e39b387249ab544ad 210 Pfam PF13500 AAA domain 9 197 7.4E-55 T 11-10-2018 syc2357_c 7d73d21034b4d42d13861b99715ea808 120 PIRSF PIRSF000260 1 119 3.1E-66 T 11-10-2018 IPR024707 Ferredoxin-thioredoxin reductase catalytic subunit, cyanobacteria-type GO:0016730|GO:0055114 syc2357_c 7d73d21034b4d42d13861b99715ea808 120 SUPERFAMILY SSF57662 12 117 2.35E-44 T 11-10-2018 IPR036644 Ferredoxin thioredoxin reductase catalytic beta subunit superfamily GO:0016730|GO:0055114 syc2357_c 7d73d21034b4d42d13861b99715ea808 120 Pfam PF02943 Ferredoxin thioredoxin reductase catalytic beta chain 15 114 2.5E-42 T 11-10-2018 IPR004209 Ferredoxin thioredoxin reductase catalytic beta subunit GO:0016730|GO:0055114 syc2357_c 7d73d21034b4d42d13861b99715ea808 120 Gene3D G3DSA:3.90.460.10 5 120 5.3E-52 T 11-10-2018 IPR036644 Ferredoxin thioredoxin reductase catalytic beta subunit superfamily GO:0016730|GO:0055114 syc1004_d 3f645898d6c6b2ba5db5120f15033edb 440 Pfam PF03572 Peptidase family S41 222 382 7.2E-53 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 syc1004_d 3f645898d6c6b2ba5db5120f15033edb 440 SUPERFAMILY SSF52096 37 386 4.14E-72 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily syc1004_d 3f645898d6c6b2ba5db5120f15033edb 440 Gene3D G3DSA:2.30.42.10 120 207 3.2E-111 T 11-10-2018 syc1004_d 3f645898d6c6b2ba5db5120f15033edb 440 Gene3D G3DSA:3.30.750.44 47 358 3.2E-111 T 11-10-2018 syc1004_d 3f645898d6c6b2ba5db5120f15033edb 440 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 70 389 2.3E-106 T 11-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 syc1004_d 3f645898d6c6b2ba5db5120f15033edb 440 SUPERFAMILY SSF50156 96 204 3.5E-19 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 syc1004_d 3f645898d6c6b2ba5db5120f15033edb 440 SMART SM00245 193 383 1.1E-69 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 syc1004_d 3f645898d6c6b2ba5db5120f15033edb 440 Gene3D G3DSA:3.90.226.10 208 380 3.2E-111 T 11-10-2018 syc1004_d 3f645898d6c6b2ba5db5120f15033edb 440 SMART SM00228 120 193 2.0E-11 T 11-10-2018 IPR001478 PDZ domain GO:0005515 syc1004_d 3f645898d6c6b2ba5db5120f15033edb 440 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 118 189 3.0E-8 T 11-10-2018 IPR001478 PDZ domain GO:0005515 syc2176_c 560a3a0545793ce2bcfa789f0e6c4f5b 316 Gene3D G3DSA:3.40.50.2000 24 128 2.9E-40 T 11-10-2018 syc2176_c 560a3a0545793ce2bcfa789f0e6c4f5b 316 SUPERFAMILY SSF53756 42 310 5.23E-44 T 11-10-2018 syc2176_c 560a3a0545793ce2bcfa789f0e6c4f5b 316 Gene3D G3DSA:3.40.50.2000 129 303 2.9E-40 T 11-10-2018 syc2176_c 560a3a0545793ce2bcfa789f0e6c4f5b 316 Pfam PF00534 Glycosyl transferases group 1 140 289 1.0E-25 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 syc2419_c b216528226987dae23781e0bcecee2fe 203 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 3 192 31.962 T 11-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 syc2419_c b216528226987dae23781e0bcecee2fe 203 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 4 190 4.0E-65 T 11-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 syc2419_c b216528226987dae23781e0bcecee2fe 203 Pfam PF02669 K+-transporting ATPase, c chain 7 190 5.1E-64 T 11-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 syc2419_c b216528226987dae23781e0bcecee2fe 203 PIRSF PIRSF001296 2 195 1.6E-69 T 11-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 syc0888_d 6b413d867b0b685cf678d8f04edceee6 895 Gene3D G3DSA:1.10.8.60 779 879 3.4E-27 T 11-10-2018 syc0888_d 6b413d867b0b685cf678d8f04edceee6 895 SUPERFAMILY SSF52540 161 556 2.88E-94 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0888_d 6b413d867b0b685cf678d8f04edceee6 895 Pfam PF07724 AAA domain (Cdc48 subfamily) 608 772 3.4E-53 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 syc0888_d 6b413d867b0b685cf678d8f04edceee6 895 Gene3D G3DSA:3.40.50.300 562 777 4.1E-85 T 11-10-2018 syc0888_d 6b413d867b0b685cf678d8f04edceee6 895 Gene3D G3DSA:1.10.1780.10 5 150 2.5E-29 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 syc0888_d 6b413d867b0b685cf678d8f04edceee6 895 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 720 734 3.1E-41 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 syc0888_d 6b413d867b0b685cf678d8f04edceee6 895 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 658 676 3.1E-41 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 syc0888_d 6b413d867b0b685cf678d8f04edceee6 895 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 687 705 3.1E-41 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 syc0888_d 6b413d867b0b685cf678d8f04edceee6 895 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 613 631 3.1E-41 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 syc0888_d 6b413d867b0b685cf678d8f04edceee6 895 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 300 312 - T 11-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 syc0888_d 6b413d867b0b685cf678d8f04edceee6 895 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 21 70 3.6E-15 T 11-10-2018 IPR004176 Clp, N-terminal syc0888_d 6b413d867b0b685cf678d8f04edceee6 895 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 103 146 5.1E-9 T 11-10-2018 IPR004176 Clp, N-terminal syc0888_d 6b413d867b0b685cf678d8f04edceee6 895 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 643 661 - T 11-10-2018 IPR028299 ClpA/B, conserved site 2 syc0888_d 6b413d867b0b685cf678d8f04edceee6 895 Gene3D G3DSA:3.40.50.300 349 556 1.2E-68 T 11-10-2018 syc0888_d 6b413d867b0b685cf678d8f04edceee6 895 Gene3D G3DSA:3.40.50.300 151 348 2.0E-73 T 11-10-2018 syc0888_d 6b413d867b0b685cf678d8f04edceee6 895 SMART SM00382 609 756 9.3E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain syc0888_d 6b413d867b0b685cf678d8f04edceee6 895 SMART SM00382 202 348 1.6E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain syc0888_d 6b413d867b0b685cf678d8f04edceee6 895 SUPERFAMILY SSF81923 7 143 5.98E-33 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 syc0888_d 6b413d867b0b685cf678d8f04edceee6 895 SMART SM01086 779 869 1.9E-34 T 11-10-2018 IPR019489 Clp ATPase, C-terminal syc0888_d 6b413d867b0b685cf678d8f04edceee6 895 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 207 342 2.4E-14 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 syc0888_d 6b413d867b0b685cf678d8f04edceee6 895 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 9 869 0.0 T 11-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 syc0888_d 6b413d867b0b685cf678d8f04edceee6 895 SUPERFAMILY SSF52540 558 861 6.46E-80 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0888_d 6b413d867b0b685cf678d8f04edceee6 895 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 779 857 6.6E-25 T 11-10-2018 IPR019489 Clp ATPase, C-terminal syc0485_c 068e3eab2b590b030015b80f9a45c305 82 Pfam PF14261 Domain of unknown function (DUF4351) 21 79 1.1E-22 T 11-10-2018 IPR025587 Domain of unknown function DUF4351 syc1212_d 7dffc78d9d12a0b91b93b053bb89cf69 345 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 300 326 2.8E-55 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 syc1212_d 7dffc78d9d12a0b91b93b053bb89cf69 345 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 185 205 2.8E-55 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 syc1212_d 7dffc78d9d12a0b91b93b053bb89cf69 345 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 48 66 2.8E-55 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 syc1212_d 7dffc78d9d12a0b91b93b053bb89cf69 345 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 68 91 2.8E-55 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 syc1212_d 7dffc78d9d12a0b91b93b053bb89cf69 345 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 130 149 2.8E-55 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 syc1212_d 7dffc78d9d12a0b91b93b053bb89cf69 345 SUPERFAMILY SSF53067 10 146 1.02E-38 T 11-10-2018 syc1212_d 7dffc78d9d12a0b91b93b053bb89cf69 345 Gene3D G3DSA:3.30.420.40 13 328 6.7E-124 T 11-10-2018 syc1212_d 7dffc78d9d12a0b91b93b053bb89cf69 345 SUPERFAMILY SSF53067 148 330 2.14E-47 T 11-10-2018 syc1212_d 7dffc78d9d12a0b91b93b053bb89cf69 345 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 10 336 1.3E-144 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 syc1212_d 7dffc78d9d12a0b91b93b053bb89cf69 345 Gene3D G3DSA:3.90.640.10 184 259 6.7E-124 T 11-10-2018 syc1212_d 7dffc78d9d12a0b91b93b053bb89cf69 345 Pfam PF06723 MreB/Mbl protein 11 336 2.1E-142 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 syc1212_d 7dffc78d9d12a0b91b93b053bb89cf69 345 Gene3D G3DSA:3.30.420.40 152 317 6.7E-124 T 11-10-2018 syc2082_d 0938eee0e8780fa8f46dcba7b80251fd 175 SUPERFAMILY SSF69304 52 167 7.32E-18 T 11-10-2018 syc2082_d 0938eee0e8780fa8f46dcba7b80251fd 175 Gene3D G3DSA:2.120.10.30 47 171 3.4E-22 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like syc2082_d 0938eee0e8780fa8f46dcba7b80251fd 175 Pfam PF07676 WD40-like Beta Propeller Repeat 94 116 2.0E-4 T 11-10-2018 IPR011659 WD40-like Beta Propeller syc2082_d 0938eee0e8780fa8f46dcba7b80251fd 175 Pfam PF07676 WD40-like Beta Propeller Repeat 137 160 0.03 T 11-10-2018 IPR011659 WD40-like Beta Propeller syc1891_d fa694898512b15317299d5a4ac41e27a 151 Pfam PF00572 Ribosomal protein L13 15 139 1.4E-58 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 syc1891_d fa694898512b15317299d5a4ac41e27a 151 PIRSF PIRSF002181 1 148 8.6E-52 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 syc1891_d fa694898512b15317299d5a4ac41e27a 151 SUPERFAMILY SSF52161 7 144 1.22E-59 T 11-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 syc1891_d fa694898512b15317299d5a4ac41e27a 151 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 16 142 29.636 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 syc1891_d fa694898512b15317299d5a4ac41e27a 151 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 7 142 4.4E-65 T 11-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc1891_d fa694898512b15317299d5a4ac41e27a 151 ProSitePatterns PS00783 Ribosomal protein L13 signature. 106 128 - T 11-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 syc1891_d fa694898512b15317299d5a4ac41e27a 151 Gene3D G3DSA:3.90.1180.10 3 147 1.4E-64 T 11-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 syc0264_c b0342002ab2407b478dc9a1cf04f221b 446 Gene3D G3DSA:3.30.2290.10 3 222 2.4E-20 T 11-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal syc0264_c b0342002ab2407b478dc9a1cf04f221b 446 SUPERFAMILY SSF111283 5 446 5.89E-88 T 11-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 syc0264_c b0342002ab2407b478dc9a1cf04f221b 446 Pfam PF01523 Putative modulator of DNA gyrase 24 315 4.1E-49 T 11-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 syc1273_d dc950f6bf8c48cf2a38d2dd54b978170 163 Pfam PF00502 Phycobilisome protein 6 160 1.2E-59 T 11-10-2018 IPR012128 Phycobilisome, alpha/beta subunit GO:0015979|GO:0030089 syc1273_d dc950f6bf8c48cf2a38d2dd54b978170 163 SUPERFAMILY SSF46458 1 160 4.13E-56 T 11-10-2018 IPR009050 Globin-like superfamily syc1273_d dc950f6bf8c48cf2a38d2dd54b978170 163 PIRSF PIRSF000081 1 161 7.3E-62 T 11-10-2018 IPR012128 Phycobilisome, alpha/beta subunit GO:0015979|GO:0030089 syc1273_d dc950f6bf8c48cf2a38d2dd54b978170 163 Gene3D G3DSA:1.10.490.20 1 162 1.1E-58 T 11-10-2018 IPR038719 Phycobilisome, alpha/beta subunit superfamily syc1755_c c593d1251434f091dab127c707b9bb00 359 Pfam PF02547 Queuosine biosynthesis protein 12 352 5.6E-131 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 syc1755_c c593d1251434f091dab127c707b9bb00 359 SUPERFAMILY SSF111337 10 353 3.92E-127 T 11-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 syc1755_c c593d1251434f091dab127c707b9bb00 359 Gene3D G3DSA:2.40.10.240 71 175 3.2E-115 T 11-10-2018 syc1755_c c593d1251434f091dab127c707b9bb00 359 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 9 353 43.896 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 syc1755_c c593d1251434f091dab127c707b9bb00 359 Gene3D G3DSA:3.40.1780.10 23 352 3.2E-115 T 11-10-2018 syc1755_c c593d1251434f091dab127c707b9bb00 359 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 10 353 2.6E-124 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 syc1973_d 8c338dd5de8f4e02e2fd2f72fb929abf 519 Gene3D G3DSA:3.40.1280.10 316 483 1.2E-54 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal syc1973_d 8c338dd5de8f4e02e2fd2f72fb929abf 519 SMART SM00967 243 319 1.8E-22 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 syc1973_d 8c338dd5de8f4e02e2fd2f72fb929abf 519 Pfam PF00588 SpoU rRNA Methylase family 336 476 2.8E-39 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 syc1973_d 8c338dd5de8f4e02e2fd2f72fb929abf 519 SUPERFAMILY SSF75217 307 494 5.49E-48 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases syc1973_d 8c338dd5de8f4e02e2fd2f72fb929abf 519 Gene3D G3DSA:3.30.1330.30 233 315 9.8E-13 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like syc1973_d 8c338dd5de8f4e02e2fd2f72fb929abf 519 SUPERFAMILY SSF55315 238 316 9.77E-18 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like syc1973_d 8c338dd5de8f4e02e2fd2f72fb929abf 519 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 243 318 1.4E-20 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 syc1973_d 8c338dd5de8f4e02e2fd2f72fb929abf 519 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 241 482 7.6E-75 T 11-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 syc1778_c 5607f864b935120b2dd4cde55062d167 323 Hamap MF_00162 Glutathione synthetase [gshB]. 1 323 143.38 T 11-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 syc1778_c 5607f864b935120b2dd4cde55062d167 323 Gene3D G3DSA:3.30.470.20 123 302 1.4E-111 T 11-10-2018 syc1778_c 5607f864b935120b2dd4cde55062d167 323 TIGRFAM TIGR01380 glut_syn: glutathione synthase 1 319 7.0E-142 T 11-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 syc1778_c 5607f864b935120b2dd4cde55062d167 323 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 2 128 1.6E-37 T 11-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 syc1778_c 5607f864b935120b2dd4cde55062d167 323 Gene3D G3DSA:3.40.50.20 6 122 1.4E-111 T 11-10-2018 syc1778_c 5607f864b935120b2dd4cde55062d167 323 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 132 304 3.5E-74 T 11-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 syc1778_c 5607f864b935120b2dd4cde55062d167 323 SUPERFAMILY SSF52440 2 129 2.79E-35 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily syc1778_c 5607f864b935120b2dd4cde55062d167 323 SUPERFAMILY SSF56059 131 317 2.39E-55 T 11-10-2018 syc1778_c 5607f864b935120b2dd4cde55062d167 323 Gene3D G3DSA:3.30.1490.20 145 209 1.4E-111 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 syc1964_d 75d3a0ea9ea18ea9924b3f71aed5d2c2 191 SUPERFAMILY SSF52833 47 148 1.05E-20 T 11-10-2018 IPR036249 Thioredoxin-like superfamily syc1964_d 75d3a0ea9ea18ea9924b3f71aed5d2c2 191 Pfam PF00085 Thioredoxin 48 144 2.9E-21 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 syc1964_d 75d3a0ea9ea18ea9924b3f71aed5d2c2 191 Gene3D G3DSA:3.40.30.10 33 150 1.3E-18 T 11-10-2018 syc1964_d 75d3a0ea9ea18ea9924b3f71aed5d2c2 191 ProSitePatterns PS00194 Thioredoxin family active site. 61 79 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 syc0677_c 4d447a826aef4d6c97cf46dcee186083 393 Pfam PF07085 DRTGG domain 246 351 2.8E-32 T 11-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 syc0677_c 4d447a826aef4d6c97cf46dcee186083 393 SUPERFAMILY SSF52540 33 253 1.47E-29 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0677_c 4d447a826aef4d6c97cf46dcee186083 393 Gene3D G3DSA:3.40.50.300 36 219 3.1E-7 T 11-10-2018 syc0677_c 4d447a826aef4d6c97cf46dcee186083 393 SUPERFAMILY SSF75138 242 357 1.7E-32 T 11-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily syc0677_c 4d447a826aef4d6c97cf46dcee186083 393 Pfam PF13500 AAA domain 34 241 2.5E-25 T 11-10-2018 syc0677_c 4d447a826aef4d6c97cf46dcee186083 393 Gene3D G3DSA:3.40.1390.20 235 373 2.9E-46 T 11-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily syc2505_d fa83051059914c0bb1be87b26f81dfe7 98 SUPERFAMILY SSF46992 3 91 8.89E-27 T 11-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc2505_d fa83051059914c0bb1be87b26f81dfe7 98 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 15 87 2.0E-21 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc2505_d fa83051059914c0bb1be87b26f81dfe7 98 Gene3D G3DSA:1.20.58.110 1 92 3.9E-30 T 11-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc2505_d fa83051059914c0bb1be87b26f81dfe7 98 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 92 16.799 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc2505_d fa83051059914c0bb1be87b26f81dfe7 98 TIGRFAM TIGR00029 S20: ribosomal protein bS20 2 90 6.1E-26 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc2505_d fa83051059914c0bb1be87b26f81dfe7 98 Pfam PF01649 Ribosomal protein S20 2 90 2.3E-28 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc1670_d 95485183dd809e6fe901d54d409aa889 198 SUPERFAMILY SSF55068 9 185 2.35E-67 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 syc1670_d 95485183dd809e6fe901d54d409aa889 198 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 27 170 3.6E-49 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 syc1670_d 95485183dd809e6fe901d54d409aa889 198 Pfam PF01625 Peptide methionine sulfoxide reductase 27 174 6.5E-56 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 syc1670_d 95485183dd809e6fe901d54d409aa889 198 Gene3D G3DSA:3.30.1060.10 16 191 3.8E-63 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 syc1670_d 95485183dd809e6fe901d54d409aa889 198 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 25 181 32.034 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 syc1479_d 022b658261e40bb68a59951fd6b4391d 728 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 1 724 24.629 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 syc1479_d 022b658261e40bb68a59951fd6b4391d 728 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 3 725 4.8E-244 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 syc1479_d 022b658261e40bb68a59951fd6b4391d 728 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 4 570 5.5E-206 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 syc1479_d 022b658261e40bb68a59951fd6b4391d 728 SUPERFAMILY SSF109604 350 504 6.73E-19 T 11-10-2018 syc1479_d 022b658261e40bb68a59951fd6b4391d 728 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 5 18 1.3E-29 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 syc1479_d 022b658261e40bb68a59951fd6b4391d 728 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 329 345 1.3E-29 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 syc1479_d 022b658261e40bb68a59951fd6b4391d 728 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 48 60 1.3E-29 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 syc1479_d 022b658261e40bb68a59951fd6b4391d 728 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 408 427 1.3E-29 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 syc2006_c f4087ae3dcc75e7f067a9fdd56b4755d 255 SUPERFAMILY SSF51366 1 254 7.77E-81 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 syc2006_c f4087ae3dcc75e7f067a9fdd56b4755d 255 Gene3D G3DSA:3.20.20.70 1 255 1.2E-101 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 syc2006_c f4087ae3dcc75e7f067a9fdd56b4755d 255 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 254 47.601 T 11-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 syc2006_c f4087ae3dcc75e7f067a9fdd56b4755d 255 Pfam PF00977 Histidine biosynthesis protein 5 238 4.9E-87 T 11-10-2018 IPR006062 Histidine biosynthesis GO:0000105 syc2006_c f4087ae3dcc75e7f067a9fdd56b4755d 255 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 254 8.9E-114 T 11-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 syc1741_c a33d91831e55bcacdc22a0780534b4dd 323 TIGRFAM TIGR02749 prenyl_cyano: solanesyl diphosphate synthase 3 322 2.8E-159 T 11-10-2018 IPR014120 Solanesyl diphosphate synthase GO:0015979|GO:0016765 syc1741_c a33d91831e55bcacdc22a0780534b4dd 323 Pfam PF00348 Polyprenyl synthetase 31 274 2.7E-78 T 11-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 syc1741_c a33d91831e55bcacdc22a0780534b4dd 323 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 207 219 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site syc1741_c a33d91831e55bcacdc22a0780534b4dd 323 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 85 99 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site syc1741_c a33d91831e55bcacdc22a0780534b4dd 323 SUPERFAMILY SSF48576 1 321 2.72E-91 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily syc1741_c a33d91831e55bcacdc22a0780534b4dd 323 Gene3D G3DSA:1.10.600.10 3 323 5.4E-111 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily syc2234_d 0900daebb865e3983242669b0f67ba86 235 SUPERFAMILY SSF52172 6 132 3.56E-44 T 11-10-2018 IPR011006 CheY-like superfamily syc2234_d 0900daebb865e3983242669b0f67ba86 235 SMART SM00421 171 228 2.5E-21 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 syc2234_d 0900daebb865e3983242669b0f67ba86 235 Gene3D G3DSA:3.40.50.2300 4 140 1.2E-42 T 11-10-2018 syc2234_d 0900daebb865e3983242669b0f67ba86 235 Pfam PF00196 Bacterial regulatory proteins, luxR family 174 227 4.2E-16 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 syc2234_d 0900daebb865e3983242669b0f67ba86 235 Gene3D G3DSA:1.10.10.10 172 234 1.2E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily syc2234_d 0900daebb865e3983242669b0f67ba86 235 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 204 216 1.8E-8 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 syc2234_d 0900daebb865e3983242669b0f67ba86 235 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 174 188 1.8E-8 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 syc2234_d 0900daebb865e3983242669b0f67ba86 235 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 188 204 1.8E-8 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 syc2234_d 0900daebb865e3983242669b0f67ba86 235 SUPERFAMILY SSF46894 160 234 1.67E-19 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 syc2234_d 0900daebb865e3983242669b0f67ba86 235 SMART SM00448 8 121 5.6E-46 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 syc2234_d 0900daebb865e3983242669b0f67ba86 235 Pfam PF00072 Response regulator receiver domain 10 121 4.4E-32 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 syc2240_c 29de554dc4558d4149178dc7e76ca0d7 566 Gene3D G3DSA:3.30.950.10 434 566 1.9E-53 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 syc2240_c 29de554dc4558d4149178dc7e76ca0d7 566 SUPERFAMILY SSF159672 2 208 1.29E-40 T 11-10-2018 IPR038029 GbiG N-terminal domain superfamily KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 syc2240_c 29de554dc4558d4149178dc7e76ca0d7 566 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 320 531 4.4E-35 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 syc2240_c 29de554dc4558d4149178dc7e76ca0d7 566 Gene3D G3DSA:3.40.1010.10 314 433 1.9E-27 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 syc2240_c 29de554dc4558d4149178dc7e76ca0d7 566 SUPERFAMILY SSF53790 315 564 3.4E-53 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 syc2240_c 29de554dc4558d4149178dc7e76ca0d7 566 TIGRFAM TIGR01466 cobJ_cbiH: precorrin-3B C17-methyltransferase 321 566 7.4E-93 T 11-10-2018 IPR006363 Precorrin-3B C17-methyltransferase domain GO:0008168|GO:0009236 syc2240_c 29de554dc4558d4149178dc7e76ca0d7 566 Gene3D G3DSA:3.40.50.11220 1 123 4.1E-21 T 11-10-2018 syc2240_c 29de554dc4558d4149178dc7e76ca0d7 566 Pfam PF11760 Cobalamin synthesis G N-terminal 49 126 9.5E-26 T 11-10-2018 IPR021744 Cobalamin synthesis G, N-terminal KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 syc0772_d aa253f8ffe370bddd1510a0bb50c29cf 132 Pfam PF13560 Helix-turn-helix domain 56 109 3.6E-10 T 11-10-2018 syc0772_d aa253f8ffe370bddd1510a0bb50c29cf 132 SUPERFAMILY SSF47413 52 116 3.07E-14 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 syc0772_d aa253f8ffe370bddd1510a0bb50c29cf 132 SMART SM00530 54 110 2.5E-10 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 syc0772_d aa253f8ffe370bddd1510a0bb50c29cf 132 Gene3D G3DSA:1.10.260.40 52 113 3.6E-16 T 11-10-2018 syc1931_c 5fa9cf468e18a77de2dda52429270c34 461 Gene3D G3DSA:2.102.10.10 24 163 3.4E-35 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 syc1931_c 5fa9cf468e18a77de2dda52429270c34 461 SUPERFAMILY SSF55961 132 359 1.68E-35 T 11-10-2018 syc1931_c 5fa9cf468e18a77de2dda52429270c34 461 Pfam PF08417 Pheophorbide a oxygenase 239 324 1.8E-23 T 11-10-2018 IPR013626 Pheophorbide a oxygenase GO:0010277|GO:0055114 syc1931_c 5fa9cf468e18a77de2dda52429270c34 461 Pfam PF00355 Rieske [2Fe-2S] domain 29 112 9.2E-20 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 syc1931_c 5fa9cf468e18a77de2dda52429270c34 461 SUPERFAMILY SSF50022 23 142 3.8E-31 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 syc1056_d dccc0f4cbb551eedaa389d3538938fe3 195 Gene3D G3DSA:1.20.58.320 2 90 2.5E-20 T 11-10-2018 syc1056_d dccc0f4cbb551eedaa389d3538938fe3 195 SUPERFAMILY SSF48452 4 191 9.48E-63 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc1056_d dccc0f4cbb551eedaa389d3538938fe3 195 Pfam PF06041 Bacterial protein of unknown function (DUF924) 11 192 1.2E-62 T 11-10-2018 IPR010323 Protein of unknown function DUF924 syc1056_d dccc0f4cbb551eedaa389d3538938fe3 195 Gene3D G3DSA:1.25.40.10 91 195 3.0E-37 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc2284_c a78d05be244d11884abee6d7fe24ea6b 571 Pfam PF00753 Metallo-beta-lactamase superfamily 46 188 1.6E-7 T 11-10-2018 IPR001279 Metallo-beta-lactamase syc2284_c a78d05be244d11884abee6d7fe24ea6b 571 SUPERFAMILY SSF56281 36 290 1.82E-45 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like syc2284_c a78d05be244d11884abee6d7fe24ea6b 571 Gene3D G3DSA:3.60.15.10 7 259 8.2E-94 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like syc2284_c a78d05be244d11884abee6d7fe24ea6b 571 Gene3D G3DSA:3.40.50.360 260 412 5.5E-38 T 11-10-2018 IPR029039 Flavoprotein-like superfamily syc2284_c a78d05be244d11884abee6d7fe24ea6b 571 SMART SM00903 422 571 2.2E-44 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 syc2284_c a78d05be244d11884abee6d7fe24ea6b 571 SMART SM00849 45 234 4.0E-27 T 11-10-2018 IPR001279 Metallo-beta-lactamase syc2284_c a78d05be244d11884abee6d7fe24ea6b 571 SUPERFAMILY SSF50475 417 567 1.86E-39 T 11-10-2018 syc2284_c a78d05be244d11884abee6d7fe24ea6b 571 Gene3D G3DSA:2.30.110.10 419 569 1.9E-28 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 syc2284_c a78d05be244d11884abee6d7fe24ea6b 571 Pfam PF01613 Flavin reductase like domain 423 566 9.4E-21 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 syc2284_c a78d05be244d11884abee6d7fe24ea6b 571 SUPERFAMILY SSF52218 260 404 3.38E-31 T 11-10-2018 IPR029039 Flavoprotein-like superfamily syc0486_c 31c324f785b6225bda44962f036f192c 85 Pfam PF14261 Domain of unknown function (DUF4351) 23 81 2.8E-24 T 11-10-2018 IPR025587 Domain of unknown function DUF4351 syc0560_c a63c14fe2e68dc1802d256ec9f1924c1 266 Pfam PF02565 Recombination protein O C terminal 86 250 6.2E-21 T 11-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 syc0560_c a63c14fe2e68dc1802d256ec9f1924c1 266 Hamap MF_00201 DNA repair protein RecO [recO]. 3 257 24.57 T 11-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 syc0560_c a63c14fe2e68dc1802d256ec9f1924c1 266 Pfam PF11967 Recombination protein O N terminal 4 79 7.5E-19 T 11-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal syc0560_c a63c14fe2e68dc1802d256ec9f1924c1 266 SUPERFAMILY SSF57863 83 247 4.18E-26 T 11-10-2018 IPR037278 ARFGAP/RecO-like zinc finger syc0560_c a63c14fe2e68dc1802d256ec9f1924c1 266 Gene3D G3DSA:1.20.1440.120 84 264 4.3E-6 T 11-10-2018 syc0560_c a63c14fe2e68dc1802d256ec9f1924c1 266 SUPERFAMILY SSF50249 2 79 2.4E-16 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold syc0560_c a63c14fe2e68dc1802d256ec9f1924c1 266 Gene3D G3DSA:2.40.50.140 1 83 1.5E-17 T 11-10-2018 syc0560_c a63c14fe2e68dc1802d256ec9f1924c1 266 TIGRFAM TIGR00613 reco: DNA repair protein RecO 7 256 1.2E-27 T 11-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 syc1554_d 952aeaecde7dc8b85ef4cb71e25c9c53 184 SUPERFAMILY SSF56770 1 177 1.91E-37 T 11-10-2018 syc1554_d 952aeaecde7dc8b85ef4cb71e25c9c53 184 Gene3D G3DSA:3.40.50.700 2 181 8.7E-34 T 11-10-2018 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily syc1554_d 952aeaecde7dc8b85ef4cb71e25c9c53 184 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 14 167 3.3E-25 T 11-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc0294_c cbc8bfda0fe47f2def66ccde4bca5e52 615 Gene3D G3DSA:3.10.580.10 470 595 3.3E-9 T 11-10-2018 syc0294_c cbc8bfda0fe47f2def66ccde4bca5e52 615 PRINTS PR00762 Chloride channel signature 349 369 3.6E-28 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 syc0294_c cbc8bfda0fe47f2def66ccde4bca5e52 615 PRINTS PR00762 Chloride channel signature 125 144 3.6E-28 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 syc0294_c cbc8bfda0fe47f2def66ccde4bca5e52 615 PRINTS PR00762 Chloride channel signature 176 195 3.6E-28 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 syc0294_c cbc8bfda0fe47f2def66ccde4bca5e52 615 PRINTS PR00762 Chloride channel signature 387 403 3.6E-28 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 syc0294_c cbc8bfda0fe47f2def66ccde4bca5e52 615 PRINTS PR00762 Chloride channel signature 405 424 3.6E-28 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 syc0294_c cbc8bfda0fe47f2def66ccde4bca5e52 615 SUPERFAMILY SSF81340 19 441 1.7E-85 T 11-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 syc0294_c cbc8bfda0fe47f2def66ccde4bca5e52 615 SUPERFAMILY SSF54631 475 566 5.81E-12 T 11-10-2018 syc0294_c cbc8bfda0fe47f2def66ccde4bca5e52 615 Pfam PF00654 Voltage gated chloride channel 121 437 6.1E-73 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 syc0294_c cbc8bfda0fe47f2def66ccde4bca5e52 615 Gene3D G3DSA:1.10.3080.10 30 449 1.1E-91 T 11-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 syc2045_d 962fd1f5c34e38b080fba474f371dc89 734 ProSitePatterns PS00419 Photosystem I psaA and psaB proteins signature. 559 568 - T 11-10-2018 IPR020586 Photosystem I PsaA/PsaB, conserved site MetaCyc: PWY-101 syc2045_d 962fd1f5c34e38b080fba474f371dc89 734 TIGRFAM TIGR01336 psaB: photosystem I core protein PsaB 2 734 0.0 T 11-10-2018 IPR006244 Photosystem I PsaB GO:0009522|GO:0009579|GO:0015979|GO:0016021 MetaCyc: PWY-101 syc2045_d 962fd1f5c34e38b080fba474f371dc89 734 PIRSF PIRSF002905 1 733 0.0 T 11-10-2018 IPR001280 Photosystem I PsaA/PsaB GO:0009522|GO:0009579|GO:0015979|GO:0016021 MetaCyc: PWY-101 syc2045_d 962fd1f5c34e38b080fba474f371dc89 734 SUPERFAMILY SSF81558 3 732 0.0 T 11-10-2018 IPR036408 Photosystem I PsaA/PsaB superfamily GO:0009522|GO:0009579|GO:0015979|GO:0016021 MetaCyc: PWY-101 syc2045_d 962fd1f5c34e38b080fba474f371dc89 734 Hamap MF_00482 Photosystem I P700 chlorophyll a apoprotein A2 [psaB]. 1 734 58.93 T 11-10-2018 IPR006244 Photosystem I PsaB GO:0009522|GO:0009579|GO:0015979|GO:0016021 MetaCyc: PWY-101 syc2045_d 962fd1f5c34e38b080fba474f371dc89 734 PRINTS PR00257 Plant photosystem I psaA and psaB protein signature 46 69 3.4E-159 T 11-10-2018 IPR001280 Photosystem I PsaA/PsaB GO:0009522|GO:0009579|GO:0015979|GO:0016021 MetaCyc: PWY-101 syc2045_d 962fd1f5c34e38b080fba474f371dc89 734 PRINTS PR00257 Plant photosystem I psaA and psaB protein signature 175 199 3.4E-159 T 11-10-2018 IPR001280 Photosystem I PsaA/PsaB GO:0009522|GO:0009579|GO:0015979|GO:0016021 MetaCyc: PWY-101 syc2045_d 962fd1f5c34e38b080fba474f371dc89 734 PRINTS PR00257 Plant photosystem I psaA and psaB protein signature 575 596 3.4E-159 T 11-10-2018 IPR001280 Photosystem I PsaA/PsaB GO:0009522|GO:0009579|GO:0015979|GO:0016021 MetaCyc: PWY-101 syc2045_d 962fd1f5c34e38b080fba474f371dc89 734 PRINTS PR00257 Plant photosystem I psaA and psaB protein signature 330 353 3.4E-159 T 11-10-2018 IPR001280 Photosystem I PsaA/PsaB GO:0009522|GO:0009579|GO:0015979|GO:0016021 MetaCyc: PWY-101 syc2045_d 962fd1f5c34e38b080fba474f371dc89 734 PRINTS PR00257 Plant photosystem I psaA and psaB protein signature 369 395 3.4E-159 T 11-10-2018 IPR001280 Photosystem I PsaA/PsaB GO:0009522|GO:0009579|GO:0015979|GO:0016021 MetaCyc: PWY-101 syc2045_d 962fd1f5c34e38b080fba474f371dc89 734 PRINTS PR00257 Plant photosystem I psaA and psaB protein signature 699 727 3.4E-159 T 11-10-2018 IPR001280 Photosystem I PsaA/PsaB GO:0009522|GO:0009579|GO:0015979|GO:0016021 MetaCyc: PWY-101 syc2045_d 962fd1f5c34e38b080fba474f371dc89 734 PRINTS PR00257 Plant photosystem I psaA and psaB protein signature 273 291 3.4E-159 T 11-10-2018 IPR001280 Photosystem I PsaA/PsaB GO:0009522|GO:0009579|GO:0015979|GO:0016021 MetaCyc: PWY-101 syc2045_d 962fd1f5c34e38b080fba474f371dc89 734 PRINTS PR00257 Plant photosystem I psaA and psaB protein signature 417 439 3.4E-159 T 11-10-2018 IPR001280 Photosystem I PsaA/PsaB GO:0009522|GO:0009579|GO:0015979|GO:0016021 MetaCyc: PWY-101 syc2045_d 962fd1f5c34e38b080fba474f371dc89 734 PRINTS PR00257 Plant photosystem I psaA and psaB protein signature 643 665 3.4E-159 T 11-10-2018 IPR001280 Photosystem I PsaA/PsaB GO:0009522|GO:0009579|GO:0015979|GO:0016021 MetaCyc: PWY-101 syc2045_d 962fd1f5c34e38b080fba474f371dc89 734 PRINTS PR00257 Plant photosystem I psaA and psaB protein signature 135 159 3.4E-159 T 11-10-2018 IPR001280 Photosystem I PsaA/PsaB GO:0009522|GO:0009579|GO:0015979|GO:0016021 MetaCyc: PWY-101 syc2045_d 962fd1f5c34e38b080fba474f371dc89 734 PRINTS PR00257 Plant photosystem I psaA and psaB protein signature 517 535 3.4E-159 T 11-10-2018 IPR001280 Photosystem I PsaA/PsaB GO:0009522|GO:0009579|GO:0015979|GO:0016021 MetaCyc: PWY-101 syc2045_d 962fd1f5c34e38b080fba474f371dc89 734 PRINTS PR00257 Plant photosystem I psaA and psaB protein signature 548 568 3.4E-159 T 11-10-2018 IPR001280 Photosystem I PsaA/PsaB GO:0009522|GO:0009579|GO:0015979|GO:0016021 MetaCyc: PWY-101 syc2045_d 962fd1f5c34e38b080fba474f371dc89 734 Gene3D G3DSA:1.20.1130.10 1 734 0.0 T 11-10-2018 IPR036408 Photosystem I PsaA/PsaB superfamily GO:0009522|GO:0009579|GO:0015979|GO:0016021 MetaCyc: PWY-101 syc2045_d 962fd1f5c34e38b080fba474f371dc89 734 Pfam PF00223 Photosystem I psaA/psaB protein 8 727 0.0 T 11-10-2018 IPR001280 Photosystem I PsaA/PsaB GO:0009522|GO:0009579|GO:0015979|GO:0016021 MetaCyc: PWY-101 syc0261_d 89adcc18609a496d6a5536fbd2892273 694 Gene3D G3DSA:3.90.980.10 113 246 3.5E-45 T 11-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily syc0261_d 89adcc18609a496d6a5536fbd2892273 694 Pfam PF08275 DNA primase catalytic core, N-terminal domain 129 258 2.4E-42 T 11-10-2018 IPR013264 DNA primase, catalytic core, N-terminal syc0261_d 89adcc18609a496d6a5536fbd2892273 694 SMART SM00493 265 338 1.4E-18 T 11-10-2018 IPR006171 TOPRIM domain syc0261_d 89adcc18609a496d6a5536fbd2892273 694 Hamap MF_00974 DNA primase [dnaG]. 5 582 28.031 T 11-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 syc0261_d 89adcc18609a496d6a5536fbd2892273 694 Gene3D G3DSA:3.40.1360.10 247 375 1.3E-38 T 11-10-2018 syc0261_d 89adcc18609a496d6a5536fbd2892273 694 SMART SM00400 37 91 7.6E-36 T 11-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 syc0261_d 89adcc18609a496d6a5536fbd2892273 694 Pfam PF01807 CHC2 zinc finger 7 100 9.9E-39 T 11-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 syc0261_d 89adcc18609a496d6a5536fbd2892273 694 Gene3D G3DSA:3.90.580.10 3 104 1.3E-34 T 11-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 syc0261_d 89adcc18609a496d6a5536fbd2892273 694 TIGRFAM TIGR01391 dnaG: DNA primase 6 428 1.1E-150 T 11-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 syc0261_d 89adcc18609a496d6a5536fbd2892273 694 SUPERFAMILY SSF56731 119 430 2.49E-99 T 11-10-2018 syc0261_d 89adcc18609a496d6a5536fbd2892273 694 SUPERFAMILY SSF57783 5 101 5.78E-34 T 11-10-2018 syc0261_d 89adcc18609a496d6a5536fbd2892273 694 Pfam PF10410 DnaB-helicase binding domain of primase 379 431 1.8E-9 T 11-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 syc0261_d 89adcc18609a496d6a5536fbd2892273 694 Pfam PF13155 Toprim-like 268 359 1.5E-21 T 11-10-2018 syc2444_c 130ec6d0e0902fc9f2eb16113e942503 356 Pfam PF04087 Domain of unknown function (DUF389) 83 219 3.2E-37 T 11-10-2018 IPR005240 Protein of unknown function DUF389 syc2444_c 130ec6d0e0902fc9f2eb16113e942503 356 TIGRFAM TIGR00341 TIGR00341: TIGR00341 family protein 49 254 1.3E-27 T 11-10-2018 syc2403_c a56ac7b275ea9c0cca739b00e1de99ca 288 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 75 281 6.5E-19 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 syc2403_c a56ac7b275ea9c0cca739b00e1de99ca 288 Gene3D G3DSA:1.10.3720.10 14 281 8.0E-63 T 11-10-2018 IPR035906 MetI-like superfamily syc2403_c a56ac7b275ea9c0cca739b00e1de99ca 288 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 10 278 7.2E-77 T 11-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 syc2403_c a56ac7b275ea9c0cca739b00e1de99ca 288 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 15 281 4.4E-83 T 11-10-2018 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 syc2403_c a56ac7b275ea9c0cca739b00e1de99ca 288 SUPERFAMILY SSF161098 12 276 5.98E-52 T 11-10-2018 IPR035906 MetI-like superfamily syc0653_d ad195b7e218e6944a9b78fb273c99839 124 SUPERFAMILY SSF50249 2 123 2.66E-54 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold syc0653_d ad195b7e218e6944a9b78fb273c99839 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 40.888 T 11-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc0653_d ad195b7e218e6944a9b78fb273c99839 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc0653_d ad195b7e218e6944a9b78fb273c99839 124 PIRSF PIRSF002133 1 124 7.3E-56 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc0653_d ad195b7e218e6944a9b78fb273c99839 124 Pfam PF00164 Ribosomal protein S12/S23 12 123 9.0E-45 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc0653_d ad195b7e218e6944a9b78fb273c99839 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 124 2.0E-71 T 11-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc0653_d ad195b7e218e6944a9b78fb273c99839 124 Gene3D G3DSA:2.40.50.140 1 124 2.7E-66 T 11-10-2018 syc0653_d ad195b7e218e6944a9b78fb273c99839 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 6.6E-63 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc0653_d ad195b7e218e6944a9b78fb273c99839 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 6.6E-63 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc0653_d ad195b7e218e6944a9b78fb273c99839 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 6.6E-63 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc0653_d ad195b7e218e6944a9b78fb273c99839 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 6.6E-63 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc0653_d ad195b7e218e6944a9b78fb273c99839 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 6.6E-63 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc0653_d ad195b7e218e6944a9b78fb273c99839 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 6.6E-63 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc1167_c 82a8eea82dd308106e1e3b035a976f48 259 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 53 242 5.9E-46 T 11-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase syc1167_c 82a8eea82dd308106e1e3b035a976f48 259 Gene3D G3DSA:3.60.140.10 40 255 2.7E-54 T 11-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily syc1167_c 82a8eea82dd308106e1e3b035a976f48 259 SUPERFAMILY SSF64438 8 253 4.58E-61 T 11-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic syc1167_c 82a8eea82dd308106e1e3b035a976f48 259 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 18 253 3.5E-60 T 11-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase syc2141_d c2543e954daf6a5d73b494dac648fbf9 128 PIRSF PIRSF006113 1 128 5.0E-20 T 11-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 syc2141_d c2543e954daf6a5d73b494dac648fbf9 128 Gene3D G3DSA:3.30.479.10 2 128 6.5E-29 T 11-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 syc2141_d c2543e954daf6a5d73b494dac648fbf9 128 SUPERFAMILY SSF55620 2 127 2.17E-30 T 11-10-2018 syc2141_d c2543e954daf6a5d73b494dac648fbf9 128 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 6 127 1.6E-28 T 11-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 syc1350_d 6d67543d69cfe3d6996ecc8ee8a9845c 543 Gene3D G3DSA:3.40.120.10 189 290 5.2E-37 T 11-10-2018 syc1350_d 6d67543d69cfe3d6996ecc8ee8a9845c 543 SUPERFAMILY SSF53738 183 292 5.1E-30 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 syc1350_d 6d67543d69cfe3d6996ecc8ee8a9845c 543 SUPERFAMILY SSF53738 278 414 2.47E-37 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 syc1350_d 6d67543d69cfe3d6996ecc8ee8a9845c 543 SUPERFAMILY SSF55957 409 543 1.99E-46 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 syc1350_d 6d67543d69cfe3d6996ecc8ee8a9845c 543 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 106 120 9.5E-24 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 syc1350_d 6d67543d69cfe3d6996ecc8ee8a9845c 543 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 241 254 9.5E-24 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 syc1350_d 6d67543d69cfe3d6996ecc8ee8a9845c 543 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 205 224 9.5E-24 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 syc1350_d 6d67543d69cfe3d6996ecc8ee8a9845c 543 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 270 285 9.5E-24 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 syc1350_d 6d67543d69cfe3d6996ecc8ee8a9845c 543 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 294 407 6.3E-31 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 syc1350_d 6d67543d69cfe3d6996ecc8ee8a9845c 543 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 14 153 2.7E-34 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 syc1350_d 6d67543d69cfe3d6996ecc8ee8a9845c 543 Gene3D G3DSA:3.40.120.10 2 188 1.4E-80 T 11-10-2018 syc1350_d 6d67543d69cfe3d6996ecc8ee8a9845c 543 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 185 286 9.8E-12 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 syc1350_d 6d67543d69cfe3d6996ecc8ee8a9845c 543 Gene3D G3DSA:3.30.310.50 389 543 7.3E-58 T 11-10-2018 syc1350_d 6d67543d69cfe3d6996ecc8ee8a9845c 543 SUPERFAMILY SSF53738 2 211 9.42E-49 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 syc1350_d 6d67543d69cfe3d6996ecc8ee8a9845c 543 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 450 516 3.0E-6 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 syc1350_d 6d67543d69cfe3d6996ecc8ee8a9845c 543 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 107 116 - T 11-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 syc1350_d 6d67543d69cfe3d6996ecc8ee8a9845c 543 Gene3D G3DSA:3.40.120.10 291 388 4.5E-38 T 11-10-2018 syc1341_c fb774aeb2697eb7b9b7b95757930b8fb 166 ProDom PD016444 YCF36 PLASTID CHLOROPLAST EXPRESSED UNCHARACTERIZED MEMBRANE CYANELLE F14F18_10 K8K14.9 OSJNBA0052K01.20 5 163 3.0E-83 T 11-10-2018 IPR009631 CGLD27-like syc1341_c fb774aeb2697eb7b9b7b95757930b8fb 166 Pfam PF06799 Protein of unknown function (DUF1230) 5 145 6.0E-58 T 11-10-2018 IPR009631 CGLD27-like syc0254_d 128b7556310926eab9b05109a8d25701 320 Pfam PF04015 Domain of unknown function (DUF362) 42 238 5.1E-46 T 11-10-2018 IPR007160 Domain of unknown function DUF362 syc1866_d 684bd50938413115e3637bbad3d1471d 210 Pfam PF00573 Ribosomal protein L4/L1 family 20 206 3.7E-64 T 11-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 syc1866_d 684bd50938413115e3637bbad3d1471d 210 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 9 209 35.485 T 11-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc1866_d 684bd50938413115e3637bbad3d1471d 210 Gene3D G3DSA:3.40.1370.10 2 209 8.8E-72 T 11-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 syc1866_d 684bd50938413115e3637bbad3d1471d 210 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 18 206 2.3E-71 T 11-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc1866_d 684bd50938413115e3637bbad3d1471d 210 SUPERFAMILY SSF52166 1 208 2.22E-72 T 11-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 syc1147_c affebc2e827f78493e787be77fb48bee 727 Pfam PF00027 Cyclic nucleotide-binding domain 614 692 5.7E-12 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain syc1147_c affebc2e827f78493e787be77fb48bee 727 Pfam PF00916 Sulfate permease family 19 381 1.9E-16 T 11-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 syc1147_c affebc2e827f78493e787be77fb48bee 727 Gene3D G3DSA:2.60.120.10 601 722 8.7E-16 T 11-10-2018 IPR014710 RmlC-like jelly roll fold syc1147_c affebc2e827f78493e787be77fb48bee 727 Pfam PF01740 STAS domain 470 545 5.7E-7 T 11-10-2018 IPR002645 STAS domain syc1147_c affebc2e827f78493e787be77fb48bee 727 Gene3D G3DSA:3.30.750.24 452 576 8.2E-16 T 11-10-2018 IPR036513 STAS domain superfamily syc1147_c affebc2e827f78493e787be77fb48bee 727 SUPERFAMILY SSF52091 470 573 2.16E-7 T 11-10-2018 IPR036513 STAS domain superfamily syc1147_c affebc2e827f78493e787be77fb48bee 727 SUPERFAMILY SSF51206 607 715 5.76E-18 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like syc0988_d 001d4df0375acb1dcc9a84403f9d200a 78 SUPERFAMILY SSF46689 3 69 4.66E-21 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 syc0988_d 001d4df0375acb1dcc9a84403f9d200a 78 Gene3D G3DSA:1.10.10.10 8 73 2.8E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily syc0988_d 001d4df0375acb1dcc9a84403f9d200a 78 Pfam PF04255 Protein of unknown function (DUF433) 9 64 4.5E-25 T 11-10-2018 IPR007367 Protein of unknown function DUF433 syc2117_d a8a41078b7804b722320ebabc3adab26 179 Pfam PF07298 NnrU protein 12 175 1.9E-45 T 11-10-2018 IPR009915 NnrU domain syc2268_d e438482063fc8f2f2936ebcaa049ede7 313 SUPERFAMILY SSF51735 1 284 9.64E-51 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily syc2268_d e438482063fc8f2f2936ebcaa049ede7 313 Gene3D G3DSA:3.40.50.720 1 289 1.8E-51 T 11-10-2018 syc2268_d e438482063fc8f2f2936ebcaa049ede7 313 Pfam PF01370 NAD dependent epimerase/dehydratase family 80 205 7.9E-13 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 syc2268_d e438482063fc8f2f2936ebcaa049ede7 313 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 66 7.2E-5 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 syc0202_c 3cf8f3815fd6fb32acd50aae0ccd2577 222 Pfam PF11318 Protein of unknown function (DUF3120) 15 212 1.3E-77 T 11-10-2018 IPR021468 Protein of unknown function DUF3120 syc2104_d b5e45caae24b61ed6710aec3926d74c9 348 Pfam PF01008 Initiation factor 2 subunit family 46 334 2.8E-82 T 11-10-2018 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 syc2104_d b5e45caae24b61ed6710aec3926d74c9 348 Gene3D G3DSA:1.20.120.420 3 144 1.4E-40 T 11-10-2018 IPR027363 Methylthioribose-1-phosphate isomerase, N-terminal KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 syc2104_d b5e45caae24b61ed6710aec3926d74c9 348 Gene3D G3DSA:3.40.50.10470 146 347 5.5E-69 T 11-10-2018 syc2104_d b5e45caae24b61ed6710aec3926d74c9 348 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 34 334 1.5E-112 T 11-10-2018 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 syc2104_d b5e45caae24b61ed6710aec3926d74c9 348 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 3 344 39.381 T 11-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 syc2104_d b5e45caae24b61ed6710aec3926d74c9 348 SUPERFAMILY SSF100950 3 338 1.05E-117 T 11-10-2018 IPR037171 NagB/RpiA transferase-like syc2104_d b5e45caae24b61ed6710aec3926d74c9 348 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 5 332 1.2E-130 T 11-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 syc2151_d 92c15ac993f39b8ae48cbdb118f4a664 631 Pfam PF13355 Protein of unknown function (DUF4101) 512 625 1.9E-26 T 11-10-2018 IPR025344 Domain of unknown function DUF4101 syc2151_d 92c15ac993f39b8ae48cbdb118f4a664 631 Gene3D G3DSA:1.10.287.110 6 71 1.8E-5 T 11-10-2018 IPR036869 Chaperone J-domain superfamily syc2151_d 92c15ac993f39b8ae48cbdb118f4a664 631 SUPERFAMILY SSF46565 4 70 6.13E-8 T 11-10-2018 IPR036869 Chaperone J-domain superfamily syc1452_c 8272faa3de6d5995313d526d0b90ad1f 788 SUPERFAMILY SSF53756 544 765 3.45E-19 T 11-10-2018 syc1452_c 8272faa3de6d5995313d526d0b90ad1f 788 Gene3D G3DSA:3.40.50.2000 665 771 2.7E-5 T 11-10-2018 syc1452_c 8272faa3de6d5995313d526d0b90ad1f 788 Gene3D G3DSA:1.25.40.10 322 455 9.5E-14 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc1452_c 8272faa3de6d5995313d526d0b90ad1f 788 Pfam PF03016 Exostosin family 115 277 1.6E-26 T 11-10-2018 IPR004263 Exostosin-like GO:0006486|GO:0016757 syc1452_c 8272faa3de6d5995313d526d0b90ad1f 788 Gene3D G3DSA:1.25.40.10 456 511 3.1E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc1452_c 8272faa3de6d5995313d526d0b90ad1f 788 SMART SM00028 458 491 5.4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc1452_c 8272faa3de6d5995313d526d0b90ad1f 788 SMART SM00028 424 457 280.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc1452_c 8272faa3de6d5995313d526d0b90ad1f 788 SMART SM00028 390 423 0.0012 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc1452_c 8272faa3de6d5995313d526d0b90ad1f 788 Pfam PF14559 Tetratricopeptide repeat 403 456 2.4E-7 T 11-10-2018 syc1452_c 8272faa3de6d5995313d526d0b90ad1f 788 Pfam PF13432 Tetratricopeptide repeat 471 509 3.4E-6 T 11-10-2018 syc1452_c 8272faa3de6d5995313d526d0b90ad1f 788 SUPERFAMILY SSF48452 353 509 1.22E-21 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc1697_d 6e471115510d07aba4abf7b9edc7131d 128 Pfam PF01042 Endoribonuclease L-PSP 11 125 1.5E-27 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 syc1697_d 6e471115510d07aba4abf7b9edc7131d 128 SUPERFAMILY SSF55298 1 127 1.41E-36 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 syc1697_d 6e471115510d07aba4abf7b9edc7131d 128 Gene3D G3DSA:3.30.1330.40 2 127 4.7E-35 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 syc2479_d 5c6db8f986bd95d38f1231e3734a7d58 279 Gene3D G3DSA:1.10.287.1080 150 274 4.9E-40 T 11-10-2018 syc2479_d 5c6db8f986bd95d38f1231e3734a7d58 279 Gene3D G3DSA:1.10.287.1080 18 141 2.0E-45 T 11-10-2018 syc2479_d 5c6db8f986bd95d38f1231e3734a7d58 279 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 44 117 3.0E-26 T 11-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core syc2479_d 5c6db8f986bd95d38f1231e3734a7d58 279 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 189 226 2.6E-6 T 11-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core syc2479_d 5c6db8f986bd95d38f1231e3734a7d58 279 SUPERFAMILY SSF101386 23 119 2.99E-22 T 11-10-2018 syc2479_d 5c6db8f986bd95d38f1231e3734a7d58 279 TIGRFAM TIGR00444 mazG: MazG family protein 27 271 1.2E-94 T 11-10-2018 IPR011551 NTP pyrophosphohydrolase MazG syc2479_d 5c6db8f986bd95d38f1231e3734a7d58 279 SUPERFAMILY SSF101386 157 251 6.17E-23 T 11-10-2018 syc0458_c 57f7f3ef65c4ab36afd6001ab4b3e3a0 387 Gene3D G3DSA:3.40.50.12710 2 380 3.2E-101 T 11-10-2018 IPR038375 Protein arginine methyltransferase NDUFAF7 superfamily Reactome: R-HSA-6799198 syc0458_c 57f7f3ef65c4ab36afd6001ab4b3e3a0 387 SUPERFAMILY SSF53335 19 364 1.16E-89 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase syc0458_c 57f7f3ef65c4ab36afd6001ab4b3e3a0 387 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 65 308 6.7E-58 T 11-10-2018 IPR003788 Protein arginine methyltransferase NDUFAF7 Reactome: R-HSA-6799198 syc2485_c 134cedd85963d7ccc74d422f32ccd234 299 Gene3D G3DSA:3.40.50.150 96 296 9.6E-51 T 11-10-2018 syc2485_c 134cedd85963d7ccc74d422f32ccd234 299 SUPERFAMILY SSF53335 50 291 2.76E-38 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase syc2485_c 134cedd85963d7ccc74d422f32ccd234 299 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 295 31.495 T 11-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 syc2485_c 134cedd85963d7ccc74d422f32ccd234 299 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 6 293 1.2E-74 T 11-10-2018 syc2485_c 134cedd85963d7ccc74d422f32ccd234 299 PIRSF PIRSF000401 5 296 3.4E-71 T 11-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 syc2485_c 134cedd85963d7ccc74d422f32ccd234 299 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 7 289 4.4E-69 T 11-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 syc0059_d 46081aca9c144f99b0b95054263a59c2 267 Gene3D G3DSA:1.10.8.590 194 255 1.4E-12 T 11-10-2018 syc0059_d 46081aca9c144f99b0b95054263a59c2 267 Pfam PF00588 SpoU rRNA Methylase family 25 171 4.6E-32 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 syc0059_d 46081aca9c144f99b0b95054263a59c2 267 SUPERFAMILY SSF75217 17 174 1.64E-32 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases syc0059_d 46081aca9c144f99b0b95054263a59c2 267 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 24 257 1.4E-55 T 11-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 syc0059_d 46081aca9c144f99b0b95054263a59c2 267 PIRSF PIRSF004808 20 263 6.2E-75 T 11-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 syc0059_d 46081aca9c144f99b0b95054263a59c2 267 Gene3D G3DSA:3.40.1280.10 23 181 8.8E-47 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal syc0107_c a413bd1f381dff74c38a9e43a24a1852 266 SMART SM00382 39 242 8.4E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain syc0107_c a413bd1f381dff74c38a9e43a24a1852 266 SUPERFAMILY SSF52540 6 226 3.9E-36 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0107_c a413bd1f381dff74c38a9e43a24a1852 266 Pfam PF00005 ABC transporter 30 181 3.4E-16 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 syc0107_c a413bd1f381dff74c38a9e43a24a1852 266 Gene3D G3DSA:3.40.50.300 12 260 7.7E-41 T 11-10-2018 syc0950_d c5643f09432dea0f089bf8ee496a1705 153 SUPERFAMILY SSF54593 18 152 4.26E-27 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase syc0950_d c5643f09432dea0f089bf8ee496a1705 153 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 19 148 1.8E-14 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain syc0950_d c5643f09432dea0f089bf8ee496a1705 153 ProSitePatterns PS00934 Glyoxalase I signature 1. 22 43 - T 11-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 syc0950_d c5643f09432dea0f089bf8ee496a1705 153 Gene3D G3DSA:3.10.180.10 21 153 1.2E-37 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase syc0154_d 523fcdc39be5a89b66f329e246bcf515 125 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 110 5.2E-17 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain syc0154_d 523fcdc39be5a89b66f329e246bcf515 125 ProSitePatterns PS00934 Glyoxalase I signature 1. 8 28 - T 11-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 syc0154_d 523fcdc39be5a89b66f329e246bcf515 125 SUPERFAMILY SSF54593 3 114 3.22E-28 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase syc0154_d 523fcdc39be5a89b66f329e246bcf515 125 Gene3D G3DSA:3.10.180.10 1 113 3.3E-28 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase syc2236_c 0b3de72c6fde6a64bcc90da5fd1479d1 238 PIRSF PIRSF000343 1 232 5.4E-86 T 11-10-2018 IPR002051 Haem oxygenase GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|MetaCyc: PWY-5874|Reactome: R-HSA-189483|Reactome: R-HSA-917937 syc2236_c 0b3de72c6fde6a64bcc90da5fd1479d1 238 SUPERFAMILY SSF48613 4 235 4.28E-77 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 syc2236_c 0b3de72c6fde6a64bcc90da5fd1479d1 238 Pfam PF01126 Heme oxygenase 4 205 1.5E-87 T 11-10-2018 IPR016053 Haem oxygenase-like GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|MetaCyc: PWY-5874|Reactome: R-HSA-189483|Reactome: R-HSA-917937 syc2236_c 0b3de72c6fde6a64bcc90da5fd1479d1 238 PRINTS PR00088 Haem oxygenase signature 117 138 2.1E-59 T 11-10-2018 IPR002051 Haem oxygenase GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|MetaCyc: PWY-5874|Reactome: R-HSA-189483|Reactome: R-HSA-917937 syc2236_c 0b3de72c6fde6a64bcc90da5fd1479d1 238 PRINTS PR00088 Haem oxygenase signature 159 180 2.1E-59 T 11-10-2018 IPR002051 Haem oxygenase GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|MetaCyc: PWY-5874|Reactome: R-HSA-189483|Reactome: R-HSA-917937 syc2236_c 0b3de72c6fde6a64bcc90da5fd1479d1 238 PRINTS PR00088 Haem oxygenase signature 191 209 2.1E-59 T 11-10-2018 IPR002051 Haem oxygenase GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|MetaCyc: PWY-5874|Reactome: R-HSA-189483|Reactome: R-HSA-917937 syc2236_c 0b3de72c6fde6a64bcc90da5fd1479d1 238 PRINTS PR00088 Haem oxygenase signature 4 29 2.1E-59 T 11-10-2018 IPR002051 Haem oxygenase GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|MetaCyc: PWY-5874|Reactome: R-HSA-189483|Reactome: R-HSA-917937 syc2236_c 0b3de72c6fde6a64bcc90da5fd1479d1 238 PRINTS PR00088 Haem oxygenase signature 64 89 2.1E-59 T 11-10-2018 IPR002051 Haem oxygenase GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|MetaCyc: PWY-5874|Reactome: R-HSA-189483|Reactome: R-HSA-917937 syc2236_c 0b3de72c6fde6a64bcc90da5fd1479d1 238 PRINTS PR00088 Haem oxygenase signature 39 64 2.1E-59 T 11-10-2018 IPR002051 Haem oxygenase GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|MetaCyc: PWY-5874|Reactome: R-HSA-189483|Reactome: R-HSA-917937 syc2236_c 0b3de72c6fde6a64bcc90da5fd1479d1 238 Gene3D G3DSA:1.20.910.10 3 224 6.3E-84 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 syc2073_d 4fd924546564dd627a1d8ee12b0f8689 441 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 11 371 6.2E-102 T 11-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 syc2073_d 4fd924546564dd627a1d8ee12b0f8689 441 SUPERFAMILY SSF69705 8 143 6.93E-30 T 11-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 syc2073_d 4fd924546564dd627a1d8ee12b0f8689 441 SUPERFAMILY SSF54814 226 307 1.83E-23 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 syc2073_d 4fd924546564dd627a1d8ee12b0f8689 441 Pfam PF13184 NusA-like KH domain 261 327 7.0E-28 T 11-10-2018 IPR025249 KH domain, NusA-like GO:0003723 syc2073_d 4fd924546564dd627a1d8ee12b0f8689 441 SUPERFAMILY SSF54814 309 372 2.35E-17 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 syc2073_d 4fd924546564dd627a1d8ee12b0f8689 441 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 6 441 27.343 T 11-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 syc2073_d 4fd924546564dd627a1d8ee12b0f8689 441 Pfam PF08529 NusA N-terminal domain 11 141 1.7E-29 T 11-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 syc2073_d 4fd924546564dd627a1d8ee12b0f8689 441 SMART SM00322 260 323 2.5 T 11-10-2018 IPR004087 K Homology domain GO:0003676 syc2073_d 4fd924546564dd627a1d8ee12b0f8689 441 SMART SM00322 332 407 8.7E-4 T 11-10-2018 IPR004087 K Homology domain GO:0003676 syc2073_d 4fd924546564dd627a1d8ee12b0f8689 441 Gene3D G3DSA:3.30.300.20 222 307 9.1E-31 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta syc2073_d 4fd924546564dd627a1d8ee12b0f8689 441 SUPERFAMILY SSF50249 149 222 1.8E-8 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold syc2073_d 4fd924546564dd627a1d8ee12b0f8689 441 Gene3D G3DSA:3.30.300.20 309 441 1.9E-29 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta syc2073_d 4fd924546564dd627a1d8ee12b0f8689 441 Gene3D G3DSA:2.40.50.140 153 221 3.7E-14 T 11-10-2018 syc2073_d 4fd924546564dd627a1d8ee12b0f8689 441 Gene3D G3DSA:3.30.1480.10 8 140 8.4E-25 T 11-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 syc1696_d fb88b5707ea38f303f0ff7fa654c03f0 444 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 10 17 - T 11-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 syc1696_d fb88b5707ea38f303f0ff7fa654c03f0 444 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 131 142 - T 11-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 syc1696_d fb88b5707ea38f303f0ff7fa654c03f0 444 Gene3D G3DSA:3.90.170.10 265 429 7.5E-70 T 11-10-2018 syc1696_d fb88b5707ea38f303f0ff7fa654c03f0 444 SUPERFAMILY SSF52540 2 427 8.07E-176 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc1696_d fb88b5707ea38f303f0ff7fa654c03f0 444 Gene3D G3DSA:1.10.300.10 100 199 8.8E-101 T 11-10-2018 syc1696_d fb88b5707ea38f303f0ff7fa654c03f0 444 SMART SM00788 3 422 2.9E-288 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 syc1696_d fb88b5707ea38f303f0ff7fa654c03f0 444 Pfam PF00709 Adenylosuccinate synthetase 4 421 1.3E-181 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 syc1696_d fb88b5707ea38f303f0ff7fa654c03f0 444 Gene3D G3DSA:3.40.440.10 5 257 8.8E-101 T 11-10-2018 syc1696_d fb88b5707ea38f303f0ff7fa654c03f0 444 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 444 215.209 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 syc1696_d fb88b5707ea38f303f0ff7fa654c03f0 444 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 5 427 4.1E-167 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 syc0806_c 09f9048732d203902dd4f5cd41799f95 469 SUPERFAMILY SSF52540 53 340 3.64E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0806_c 09f9048732d203902dd4f5cd41799f95 469 SMART SM00487 2 176 1.0E-17 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain syc0806_c 09f9048732d203902dd4f5cd41799f95 469 Gene3D G3DSA:3.40.50.300 169 366 3.3E-27 T 11-10-2018 syc0806_c 09f9048732d203902dd4f5cd41799f95 469 Gene3D G3DSA:3.40.50.300 1 166 4.8E-29 T 11-10-2018 syc0806_c 09f9048732d203902dd4f5cd41799f95 469 Pfam PF04851 Type III restriction enzyme, res subunit 4 149 6.8E-19 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 syc0806_c 09f9048732d203902dd4f5cd41799f95 469 SMART SM00490 245 326 5.4E-11 T 11-10-2018 IPR001650 Helicase, C-terminal syc0806_c 09f9048732d203902dd4f5cd41799f95 469 Pfam PF00271 Helicase conserved C-terminal domain 234 324 5.9E-11 T 11-10-2018 IPR001650 Helicase, C-terminal syc1343_c 2044cea9efaf63b70a39c40e1db5b2da 249 SUPERFAMILY SSF53335 4 228 2.48E-24 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase syc1343_c 2044cea9efaf63b70a39c40e1db5b2da 249 Gene3D G3DSA:3.40.50.150 18 237 4.9E-24 T 11-10-2018 syc1343_c 2044cea9efaf63b70a39c40e1db5b2da 249 Pfam PF13649 Methyltransferase domain 56 152 1.2E-10 T 11-10-2018 syc0312_d 02057e34a4d2cc412961a63db467dcfb 279 SUPERFAMILY SSF161098 80 266 4.06E-26 T 11-10-2018 IPR035906 MetI-like superfamily syc0312_d 02057e34a4d2cc412961a63db467dcfb 279 TIGRFAM TIGR01183 ntrB: nitrate ABC transporter, permease protein 66 270 3.0E-111 T 11-10-2018 IPR005889 Nitrate transport permease GO:0015112|GO:0015706|GO:0016021 syc0312_d 02057e34a4d2cc412961a63db467dcfb 279 Gene3D G3DSA:1.10.3720.10 78 271 1.1E-20 T 11-10-2018 IPR035906 MetI-like superfamily syc0312_d 02057e34a4d2cc412961a63db467dcfb 279 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 102 273 1.1E-27 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 syc0309_c a3bedc207581c47ed80435156749cf43 349 Pfam PF13646 HEAT repeats 113 182 1.7E-9 T 11-10-2018 syc0309_c a3bedc207581c47ed80435156749cf43 349 SUPERFAMILY SSF48371 115 342 1.51E-11 T 11-10-2018 IPR016024 Armadillo-type fold syc0309_c a3bedc207581c47ed80435156749cf43 349 Gene3D G3DSA:1.25.10.10 69 265 1.7E-11 T 11-10-2018 IPR011989 Armadillo-like helical syc1017_d 94de7a74d0608a8ba16d915359479ef9 102 TIGRFAM TIGR03792 TIGR03792: uncharacterized cyanobacterial protein, TIGR03792 family 2 90 4.2E-33 T 11-10-2018 IPR022512 Conserved hypothetical protein CHP03792 syc1017_d 94de7a74d0608a8ba16d915359479ef9 102 Gene3D G3DSA:3.30.70.100 2 96 8.6E-7 T 11-10-2018 syc1017_d 94de7a74d0608a8ba16d915359479ef9 102 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 64 1.6E-7 T 11-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain syc1017_d 94de7a74d0608a8ba16d915359479ef9 102 SUPERFAMILY SSF54909 1 69 4.54E-13 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel syc0916_c 136900cb4994b5f832eeed05536215c3 153 Pfam PF03079 ARD/ARD' family 6 138 4.9E-29 T 11-10-2018 IPR004313 Acireductone dioxygenase ARD family GO:0010309|GO:0055114 KEGG: 00270+1.13.11.54|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 syc0916_c 136900cb4994b5f832eeed05536215c3 153 Hamap MF_01682 Acireductone dioxygenase [mtnD]. 1 145 33.668 T 11-10-2018 IPR023956 Acireductone dioxygenase ARD, bacteria GO:0005506|GO:0010308|GO:0010309|GO:0016151|GO:0019284|GO:0055114 KEGG: 00270+1.13.11.54+1.13.11.53|MetaCyc: PWY-4361|MetaCyc: PWY-5389 syc0916_c 136900cb4994b5f832eeed05536215c3 153 SUPERFAMILY SSF51182 2 150 4.28E-35 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily syc0916_c 136900cb4994b5f832eeed05536215c3 153 Gene3D G3DSA:2.60.120.10 1 130 6.7E-46 T 11-10-2018 IPR014710 RmlC-like jelly roll fold syc0408_c b51e3e5fd6f67face77d546626689204 525 Gene3D G3DSA:3.40.50.620 6 337 3.9E-142 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold syc0408_c b51e3e5fd6f67face77d546626689204 525 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 4 66 1.6E-7 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 syc0408_c b51e3e5fd6f67face77d546626689204 525 Hamap MF_01228 Methionine--tRNA ligase [metG]. 1 513 46.571 T 11-10-2018 IPR023457 Methionine-tRNA synthetase, type 2 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 syc0408_c b51e3e5fd6f67face77d546626689204 525 SUPERFAMILY SSF47323 353 516 5.05E-32 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 syc0408_c b51e3e5fd6f67face77d546626689204 525 SUPERFAMILY SSF52374 3 351 9.12E-103 T 11-10-2018 syc0408_c b51e3e5fd6f67face77d546626689204 525 Gene3D G3DSA:2.170.220.10 116 226 3.9E-142 T 11-10-2018 syc0408_c b51e3e5fd6f67face77d546626689204 525 PRINTS PR01041 Methionyl-tRNA synthetase signature 39 53 2.8E-35 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 syc0408_c b51e3e5fd6f67face77d546626689204 525 PRINTS PR01041 Methionyl-tRNA synthetase signature 260 275 2.8E-35 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 syc0408_c b51e3e5fd6f67face77d546626689204 525 PRINTS PR01041 Methionyl-tRNA synthetase signature 7 20 2.8E-35 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 syc0408_c b51e3e5fd6f67face77d546626689204 525 PRINTS PR01041 Methionyl-tRNA synthetase signature 224 235 2.8E-35 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 syc0408_c b51e3e5fd6f67face77d546626689204 525 PRINTS PR01041 Methionyl-tRNA synthetase signature 352 363 2.8E-35 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 syc0408_c b51e3e5fd6f67face77d546626689204 525 PRINTS PR01041 Methionyl-tRNA synthetase signature 87 98 2.8E-35 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 syc0408_c b51e3e5fd6f67face77d546626689204 525 Pfam PF09334 tRNA synthetases class I (M) 140 365 5.6E-64 T 11-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 syc0408_c b51e3e5fd6f67face77d546626689204 525 Gene3D G3DSA:1.10.730.10 341 524 1.5E-40 T 11-10-2018 syc0408_c b51e3e5fd6f67face77d546626689204 525 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 7 485 2.8E-162 T 11-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 syc0175_c dc334f3b86524401cdc2e4d4e09ee45b 510 Gene3D G3DSA:3.40.50.300 2 296 2.3E-70 T 11-10-2018 syc0175_c dc334f3b86524401cdc2e4d4e09ee45b 510 SUPERFAMILY SSF52540 314 492 4.7E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0175_c dc334f3b86524401cdc2e4d4e09ee45b 510 Pfam PF12848 ABC transporter 228 299 4.2E-11 T 11-10-2018 IPR032781 ABC-transporter extension domain syc0175_c dc334f3b86524401cdc2e4d4e09ee45b 510 Gene3D G3DSA:3.40.50.300 310 497 6.3E-39 T 11-10-2018 syc0175_c dc334f3b86524401cdc2e4d4e09ee45b 510 Pfam PF00005 ABC transporter 337 475 3.9E-23 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 syc0175_c dc334f3b86524401cdc2e4d4e09ee45b 510 SUPERFAMILY SSF52540 4 242 1.22E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0175_c dc334f3b86524401cdc2e4d4e09ee45b 510 Pfam PF00005 ABC transporter 19 189 2.7E-26 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 syc0175_c dc334f3b86524401cdc2e4d4e09ee45b 510 SMART SM00382 28 234 3.1E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain syc0175_c dc334f3b86524401cdc2e4d4e09ee45b 510 SMART SM00382 345 504 1.7E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain syc0734_c 3de482cc48ee7be409bda2fd3961f124 353 Gene3D G3DSA:3.40.718.10 5 343 1.8E-108 T 11-10-2018 syc0734_c 3de482cc48ee7be409bda2fd3961f124 353 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 8 343 34.86 T 11-10-2018 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase GO:0042823|GO:0050570 KEGG: 00750+1.1.1.262 syc0734_c 3de482cc48ee7be409bda2fd3961f124 353 SUPERFAMILY SSF53659 9 343 2.47E-94 T 11-10-2018 syc0734_c 3de482cc48ee7be409bda2fd3961f124 353 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 11 340 1.4E-111 T 11-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 syc0734_c 3de482cc48ee7be409bda2fd3961f124 353 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 43 336 7.7E-98 T 11-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 syc1030_d 96c123e9f8d1004fcdc6fa94688e89aa 459 Gene3D G3DSA:3.40.605.10 18 433 4.4E-177 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 syc1030_d 96c123e9f8d1004fcdc6fa94688e89aa 459 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 214 221 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 syc1030_d 96c123e9f8d1004fcdc6fa94688e89aa 459 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 242 253 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 syc1030_d 96c123e9f8d1004fcdc6fa94688e89aa 459 Pfam PF00171 Aldehyde dehydrogenase family 13 433 2.0E-93 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 syc1030_d 96c123e9f8d1004fcdc6fa94688e89aa 459 SUPERFAMILY SSF53720 11 450 3.53E-133 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 syc1030_d 96c123e9f8d1004fcdc6fa94688e89aa 459 Gene3D G3DSA:3.40.309.10 218 413 4.4E-177 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 syc1030_d 96c123e9f8d1004fcdc6fa94688e89aa 459 PIRSF PIRSF036492 2 459 1.1E-188 T 11-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 syc2207_c 552a3b992d02752f0dd5753988fe089c 346 Gene3D G3DSA:3.40.50.150 169 325 3.7E-15 T 11-10-2018 syc2207_c 552a3b992d02752f0dd5753988fe089c 346 SUPERFAMILY SSF53335 193 315 2.99E-16 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase syc2207_c 552a3b992d02752f0dd5753988fe089c 346 Pfam PF13489 Methyltransferase domain 145 271 1.6E-9 T 11-10-2018 syc1306_c 20233932543c567e02ce4b6d27031726 338 SUPERFAMILY SSF52374 5 176 1.32E-23 T 11-10-2018 syc1306_c 20233932543c567e02ce4b6d27031726 338 ProSitePatterns PS00893 Nudix box signature. 232 253 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 syc1306_c 20233932543c567e02ce4b6d27031726 338 Pfam PF00293 NUDIX domain 205 332 6.9E-15 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 syc1306_c 20233932543c567e02ce4b6d27031726 338 SUPERFAMILY SSF55811 191 337 1.62E-27 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 syc1306_c 20233932543c567e02ce4b6d27031726 338 Gene3D G3DSA:3.90.79.10 194 338 8.0E-42 T 11-10-2018 syc1306_c 20233932543c567e02ce4b6d27031726 338 Gene3D G3DSA:3.40.50.620 1 193 7.8E-62 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold syc1306_c 20233932543c567e02ce4b6d27031726 338 Pfam PF01467 Cytidylyltransferase-like 7 78 9.4E-9 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 syc1306_c 20233932543c567e02ce4b6d27031726 338 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 5 65 1.9E-11 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 syc0096_d bc65528ded9eff1875fa494acf9169cf 297 SUPERFAMILY SSF46626 155 297 1.05E-22 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 syc0096_d bc65528ded9eff1875fa494acf9169cf 297 Pfam PF06537 Di-haem oxidoreductase, putative peroxidase 136 297 4.6E-64 T 11-10-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase syc0096_d bc65528ded9eff1875fa494acf9169cf 297 Gene3D G3DSA:1.10.760.10 163 297 2.7E-8 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 syc0048_c 6eb1149672f9b9e68fb3ce8ed8089455 295 Gene3D G3DSA:2.40.50.140 109 189 1.9E-8 T 11-10-2018 syc0048_c 6eb1149672f9b9e68fb3ce8ed8089455 295 Gene3D G3DSA:2.40.50.140 11 108 1.5E-12 T 11-10-2018 syc0048_c 6eb1149672f9b9e68fb3ce8ed8089455 295 SMART SM00316 191 261 3.8E-22 T 11-10-2018 IPR022967 RNA-binding domain, S1 syc0048_c 6eb1149672f9b9e68fb3ce8ed8089455 295 SMART SM00316 113 179 3.4E-10 T 11-10-2018 IPR022967 RNA-binding domain, S1 syc0048_c 6eb1149672f9b9e68fb3ce8ed8089455 295 SMART SM00316 26 97 1.0E-12 T 11-10-2018 IPR022967 RNA-binding domain, S1 syc0048_c 6eb1149672f9b9e68fb3ce8ed8089455 295 Pfam PF00575 S1 RNA binding domain 113 177 4.0E-8 T 11-10-2018 IPR003029 S1 domain GO:0003676 syc0048_c 6eb1149672f9b9e68fb3ce8ed8089455 295 Pfam PF00575 S1 RNA binding domain 190 261 2.0E-16 T 11-10-2018 IPR003029 S1 domain GO:0003676 syc0048_c 6eb1149672f9b9e68fb3ce8ed8089455 295 Pfam PF00575 S1 RNA binding domain 26 95 1.5E-4 T 11-10-2018 IPR003029 S1 domain GO:0003676 syc0048_c 6eb1149672f9b9e68fb3ce8ed8089455 295 Gene3D G3DSA:2.40.50.140 190 269 6.7E-21 T 11-10-2018 syc0048_c 6eb1149672f9b9e68fb3ce8ed8089455 295 SUPERFAMILY SSF50249 24 122 4.68E-15 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold syc0048_c 6eb1149672f9b9e68fb3ce8ed8089455 295 PRINTS PR00681 Ribosomal protein S1 signature 118 134 1.7E-12 T 11-10-2018 syc0048_c 6eb1149672f9b9e68fb3ce8ed8089455 295 PRINTS PR00681 Ribosomal protein S1 signature 28 46 1.7E-12 T 11-10-2018 syc0048_c 6eb1149672f9b9e68fb3ce8ed8089455 295 PRINTS PR00681 Ribosomal protein S1 signature 94 113 1.7E-12 T 11-10-2018 syc0048_c 6eb1149672f9b9e68fb3ce8ed8089455 295 PRINTS PR00681 Ribosomal protein S1 signature 46 60 1.7E-12 T 11-10-2018 syc0048_c 6eb1149672f9b9e68fb3ce8ed8089455 295 PRINTS PR00681 Ribosomal protein S1 signature 136 153 1.7E-12 T 11-10-2018 syc0048_c 6eb1149672f9b9e68fb3ce8ed8089455 295 SUPERFAMILY SSF50249 191 269 6.34E-20 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold syc0048_c 6eb1149672f9b9e68fb3ce8ed8089455 295 SUPERFAMILY SSF50249 102 180 1.92E-10 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold syc1405_c 400e19a833833ea3a4118147aff368cd 109 PIRSF PIRSF006639 1 109 1.2E-40 T 11-10-2018 IPR011379 NTP Pyrophosphohydrolase MazG-related, GP37 syc1405_c 400e19a833833ea3a4118147aff368cd 109 Gene3D G3DSA:1.10.287.1080 1 100 4.2E-17 T 11-10-2018 syc1405_c 400e19a833833ea3a4118147aff368cd 109 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 28 98 9.3E-15 T 11-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core syc1405_c 400e19a833833ea3a4118147aff368cd 109 SUPERFAMILY SSF101386 2 97 2.94E-22 T 11-10-2018 syc0600_d 5233ed52433b4631b91214314513358e 630 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 210 341 6.2E-46 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 syc0600_d 5233ed52433b4631b91214314513358e 630 SUPERFAMILY SSF140990 424 623 5.62E-71 T 11-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 syc0600_d 5233ed52433b4631b91214314513358e 630 Gene3D G3DSA:1.10.8.60 344 420 2.8E-29 T 11-10-2018 syc0600_d 5233ed52433b4631b91214314513358e 630 Pfam PF01434 Peptidase family M41 405 612 1.7E-76 T 11-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 syc0600_d 5233ed52433b4631b91214314513358e 630 Gene3D G3DSA:1.20.58.760 423 625 2.4E-70 T 11-10-2018 syc0600_d 5233ed52433b4631b91214314513358e 630 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 6 624 36.466 T 11-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 syc0600_d 5233ed52433b4631b91214314513358e 630 ProSitePatterns PS00674 AAA-protein family signature. 313 331 - T 11-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 syc0600_d 5233ed52433b4631b91214314513358e 630 SUPERFAMILY SSF52540 170 414 1.38E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0600_d 5233ed52433b4631b91214314513358e 630 Gene3D G3DSA:3.40.50.300 163 343 6.6E-70 T 11-10-2018 syc0600_d 5233ed52433b4631b91214314513358e 630 SMART SM00382 206 345 1.8E-25 T 11-10-2018 IPR003593 AAA+ ATPase domain syc0600_d 5233ed52433b4631b91214314513358e 630 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 120 613 2.1E-228 T 11-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 syc0114_c 1a71a4b9e3bd1a1b47c0371eaea62fd6 144 SUPERFAMILY SSF54593 1 134 6.46E-17 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase syc0114_c 1a71a4b9e3bd1a1b47c0371eaea62fd6 144 Gene3D G3DSA:3.10.180.10 2 137 2.5E-15 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase syc0114_c 1a71a4b9e3bd1a1b47c0371eaea62fd6 144 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 1 75 4.8E-5 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain syc0366_c d2b5673654ae252a56f2dcdd5e7d9171 300 Gene3D G3DSA:3.30.479.10 11 143 4.0E-39 T 11-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 syc0366_c d2b5673654ae252a56f2dcdd5e7d9171 300 Gene3D G3DSA:3.30.479.10 144 282 4.4E-48 T 11-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 syc0366_c d2b5673654ae252a56f2dcdd5e7d9171 300 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 151 282 4.5E-35 T 11-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 syc0366_c d2b5673654ae252a56f2dcdd5e7d9171 300 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 18 143 1.0E-26 T 11-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 syc0366_c d2b5673654ae252a56f2dcdd5e7d9171 300 SUPERFAMILY SSF55620 147 281 1.45E-43 T 11-10-2018 syc0366_c d2b5673654ae252a56f2dcdd5e7d9171 300 SUPERFAMILY SSF55620 14 144 1.61E-41 T 11-10-2018 syc1035_d bcffa7fa5e17028508df833f58b0b7d8 480 Pfam PF02517 CAAX protease self-immunity 382 468 4.3E-21 T 11-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 syc2185_d c6cfb26646f5ea52f4e7326988d58195 212 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 9 203 7.1E-49 T 11-10-2018 IPR004507 Flavin prenyltransferase UbiX-like syc2185_d c6cfb26646f5ea52f4e7326988d58195 212 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 7 205 33.495 T 11-10-2018 IPR004507 Flavin prenyltransferase UbiX-like syc2185_d c6cfb26646f5ea52f4e7326988d58195 212 Gene3D G3DSA:3.40.50.1950 5 210 3.0E-71 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 syc2185_d c6cfb26646f5ea52f4e7326988d58195 212 Pfam PF02441 Flavoprotein 9 184 6.1E-23 T 11-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 syc2185_d c6cfb26646f5ea52f4e7326988d58195 212 SUPERFAMILY SSF52507 9 205 3.79E-53 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 syc2041_d 0d9f59765f38768faa02c81ef5135323 290 Gene3D G3DSA:1.10.3720.10 79 285 4.9E-19 T 11-10-2018 IPR035906 MetI-like superfamily syc2041_d 0d9f59765f38768faa02c81ef5135323 290 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 106 289 1.2E-23 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 syc2041_d 0d9f59765f38768faa02c81ef5135323 290 SUPERFAMILY SSF161098 84 274 3.92E-24 T 11-10-2018 IPR035906 MetI-like superfamily syc2044_d 836ff6c0da3397cf6fb5dbf10feb6ab7 763 ProSitePatterns PS00419 Photosystem I psaA and psaB proteins signature. 586 595 - T 11-10-2018 IPR020586 Photosystem I PsaA/PsaB, conserved site MetaCyc: PWY-101 syc2044_d 836ff6c0da3397cf6fb5dbf10feb6ab7 763 Hamap MF_00458 Photosystem I P700 chlorophyll a apoprotein A1 [psaA]. 1 763 41.067 T 11-10-2018 IPR006243 Photosystem I PsaA GO:0009522|GO:0015979|GO:0016021|GO:0046872 MetaCyc: PWY-101 syc2044_d 836ff6c0da3397cf6fb5dbf10feb6ab7 763 Gene3D G3DSA:1.20.1130.10 1 763 0.0 T 11-10-2018 IPR036408 Photosystem I PsaA/PsaB superfamily GO:0009522|GO:0009579|GO:0015979|GO:0016021 MetaCyc: PWY-101 syc2044_d 836ff6c0da3397cf6fb5dbf10feb6ab7 763 SUPERFAMILY SSF81558 28 761 0.0 T 11-10-2018 IPR036408 Photosystem I PsaA/PsaB superfamily GO:0009522|GO:0009579|GO:0015979|GO:0016021 MetaCyc: PWY-101 syc2044_d 836ff6c0da3397cf6fb5dbf10feb6ab7 763 Pfam PF00223 Photosystem I psaA/psaB protein 34 757 0.0 T 11-10-2018 IPR001280 Photosystem I PsaA/PsaB GO:0009522|GO:0009579|GO:0015979|GO:0016021 MetaCyc: PWY-101 syc2044_d 836ff6c0da3397cf6fb5dbf10feb6ab7 763 PRINTS PR00257 Plant photosystem I psaA and psaB protein signature 72 95 1.8E-144 T 11-10-2018 IPR001280 Photosystem I PsaA/PsaB GO:0009522|GO:0009579|GO:0015979|GO:0016021 MetaCyc: PWY-101 syc2044_d 836ff6c0da3397cf6fb5dbf10feb6ab7 763 PRINTS PR00257 Plant photosystem I psaA and psaB protein signature 575 595 1.8E-144 T 11-10-2018 IPR001280 Photosystem I PsaA/PsaB GO:0009522|GO:0009579|GO:0015979|GO:0016021 MetaCyc: PWY-101 syc2044_d 836ff6c0da3397cf6fb5dbf10feb6ab7 763 PRINTS PR00257 Plant photosystem I psaA and psaB protein signature 399 425 1.8E-144 T 11-10-2018 IPR001280 Photosystem I PsaA/PsaB GO:0009522|GO:0009579|GO:0015979|GO:0016021 MetaCyc: PWY-101 syc2044_d 836ff6c0da3397cf6fb5dbf10feb6ab7 763 PRINTS PR00257 Plant photosystem I psaA and psaB protein signature 360 383 1.8E-144 T 11-10-2018 IPR001280 Photosystem I PsaA/PsaB GO:0009522|GO:0009579|GO:0015979|GO:0016021 MetaCyc: PWY-101 syc2044_d 836ff6c0da3397cf6fb5dbf10feb6ab7 763 PRINTS PR00257 Plant photosystem I psaA and psaB protein signature 729 757 1.8E-144 T 11-10-2018 IPR001280 Photosystem I PsaA/PsaB GO:0009522|GO:0009579|GO:0015979|GO:0016021 MetaCyc: PWY-101 syc2044_d 836ff6c0da3397cf6fb5dbf10feb6ab7 763 PRINTS PR00257 Plant photosystem I psaA and psaB protein signature 197 221 1.8E-144 T 11-10-2018 IPR001280 Photosystem I PsaA/PsaB GO:0009522|GO:0009579|GO:0015979|GO:0016021 MetaCyc: PWY-101 syc2044_d 836ff6c0da3397cf6fb5dbf10feb6ab7 763 PRINTS PR00257 Plant photosystem I psaA and psaB protein signature 602 623 1.8E-144 T 11-10-2018 IPR001280 Photosystem I PsaA/PsaB GO:0009522|GO:0009579|GO:0015979|GO:0016021 MetaCyc: PWY-101 syc2044_d 836ff6c0da3397cf6fb5dbf10feb6ab7 763 PRINTS PR00257 Plant photosystem I psaA and psaB protein signature 677 699 1.8E-144 T 11-10-2018 IPR001280 Photosystem I PsaA/PsaB GO:0009522|GO:0009579|GO:0015979|GO:0016021 MetaCyc: PWY-101 syc2044_d 836ff6c0da3397cf6fb5dbf10feb6ab7 763 PRINTS PR00257 Plant photosystem I psaA and psaB protein signature 447 469 1.8E-144 T 11-10-2018 IPR001280 Photosystem I PsaA/PsaB GO:0009522|GO:0009579|GO:0015979|GO:0016021 MetaCyc: PWY-101 syc2044_d 836ff6c0da3397cf6fb5dbf10feb6ab7 763 PRINTS PR00257 Plant photosystem I psaA and psaB protein signature 544 562 1.8E-144 T 11-10-2018 IPR001280 Photosystem I PsaA/PsaB GO:0009522|GO:0009579|GO:0015979|GO:0016021 MetaCyc: PWY-101 syc2044_d 836ff6c0da3397cf6fb5dbf10feb6ab7 763 PRINTS PR00257 Plant photosystem I psaA and psaB protein signature 158 182 1.8E-144 T 11-10-2018 IPR001280 Photosystem I PsaA/PsaB GO:0009522|GO:0009579|GO:0015979|GO:0016021 MetaCyc: PWY-101 syc2044_d 836ff6c0da3397cf6fb5dbf10feb6ab7 763 PIRSF PIRSF002905 14 763 0.0 T 11-10-2018 IPR001280 Photosystem I PsaA/PsaB GO:0009522|GO:0009579|GO:0015979|GO:0016021 MetaCyc: PWY-101 syc2044_d 836ff6c0da3397cf6fb5dbf10feb6ab7 763 TIGRFAM TIGR01335 psaA: photosystem I core protein PsaA 1 763 0.0 T 11-10-2018 IPR006243 Photosystem I PsaA GO:0009522|GO:0015979|GO:0016021|GO:0046872 MetaCyc: PWY-101 syc0738_d db3c30aa1c5a85ebf5254b4dcd402ac4 197 Gene3D G3DSA:2.40.128.590 1 197 5.9E-79 T 11-10-2018 IPR038672 Chromophore lyase CpcT/CpeT superfamily syc0738_d db3c30aa1c5a85ebf5254b4dcd402ac4 197 Hamap MF_01460 Chromophore lyase CpcT/CpeT [cpcT]. 3 190 38.429 T 11-10-2018 IPR010404 Chromophore lyase CpcT/CpeT GO:0016829|GO:0017009 syc0738_d db3c30aa1c5a85ebf5254b4dcd402ac4 197 Pfam PF06206 CpeT/CpcT family (DUF1001) 9 186 2.9E-68 T 11-10-2018 IPR010404 Chromophore lyase CpcT/CpeT GO:0016829|GO:0017009 syc0252_c 5fd9a0695e22c8a9b5edec088ab4cc27 473 Gene3D G3DSA:3.40.50.300 2 208 9.9E-63 T 11-10-2018 syc0252_c 5fd9a0695e22c8a9b5edec088ab4cc27 473 SMART SM00487 18 221 8.2E-22 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain syc0252_c 5fd9a0695e22c8a9b5edec088ab4cc27 473 SUPERFAMILY SSF52540 61 347 3.24E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0252_c 5fd9a0695e22c8a9b5edec088ab4cc27 473 SMART SM00490 254 335 4.3E-18 T 11-10-2018 IPR001650 Helicase, C-terminal syc0252_c 5fd9a0695e22c8a9b5edec088ab4cc27 473 Pfam PF00271 Helicase conserved C-terminal domain 229 333 5.1E-14 T 11-10-2018 IPR001650 Helicase, C-terminal syc0252_c 5fd9a0695e22c8a9b5edec088ab4cc27 473 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 12 342 3.0E-91 T 11-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 syc0252_c 5fd9a0695e22c8a9b5edec088ab4cc27 473 Pfam PF00270 DEAD/DEAH box helicase 24 192 8.3E-19 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 syc1692_d e350eb67d85d24ea3d9f01650f4e4164 351 SUPERFAMILY SSF53335 92 338 8.0E-37 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase syc1692_d e350eb67d85d24ea3d9f01650f4e4164 351 Pfam PF13649 Methyltransferase domain 184 281 1.8E-19 T 11-10-2018 syc1692_d e350eb67d85d24ea3d9f01650f4e4164 351 Gene3D G3DSA:3.40.50.150 85 351 7.4E-34 T 11-10-2018 syc2208_c c8bf3efa1a78465f926a51ff23f6214d 430 Gene3D G3DSA:3.40.50.2000 225 409 1.4E-27 T 11-10-2018 syc2208_c c8bf3efa1a78465f926a51ff23f6214d 430 Gene3D G3DSA:3.40.50.2000 159 423 1.4E-27 T 11-10-2018 syc2208_c c8bf3efa1a78465f926a51ff23f6214d 430 Pfam PF00534 Glycosyl transferases group 1 251 373 2.8E-14 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 syc2208_c c8bf3efa1a78465f926a51ff23f6214d 430 SUPERFAMILY SSF53756 18 429 3.14E-44 T 11-10-2018 syc1410_c 42ddc682fc64d8580cd4f81e9756c166 312 Pfam PF13177 DNA polymerase III, delta subunit 11 178 1.1E-31 T 11-10-2018 syc1410_c 42ddc682fc64d8580cd4f81e9756c166 312 Gene3D G3DSA:3.40.50.300 2 176 1.9E-35 T 11-10-2018 syc1410_c 42ddc682fc64d8580cd4f81e9756c166 312 SUPERFAMILY SSF52540 7 217 1.25E-36 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc2376_d d1be4a51543b4901022590fe5c74cd20 217 Gene3D G3DSA:3.40.50.2020 1 216 1.6E-68 T 11-10-2018 syc2376_d d1be4a51543b4901022590fe5c74cd20 217 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 6 217 39.609 T 11-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 syc2376_d d1be4a51543b4901022590fe5c74cd20 217 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 9 216 7.3E-71 T 11-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 syc2376_d d1be4a51543b4901022590fe5c74cd20 217 SUPERFAMILY SSF53271 7 215 6.08E-60 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like syc2376_d d1be4a51543b4901022590fe5c74cd20 217 Pfam PF14681 Uracil phosphoribosyltransferase 9 216 4.2E-70 T 11-10-2018 syc1605_c cd388df308a5f6855bb666b93594ee67 354 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 345 2.0E-150 T 11-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 syc1605_c cd388df308a5f6855bb666b93594ee67 354 Gene3D G3DSA:3.20.20.70 1 348 4.1E-155 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 syc1605_c cd388df308a5f6855bb666b93594ee67 354 PIRSF PIRSF001361 1 351 1.1E-160 T 11-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 syc1605_c cd388df308a5f6855bb666b93594ee67 354 Pfam PF00793 DAHP synthetase I family 43 338 1.4E-95 T 11-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 syc1605_c cd388df308a5f6855bb666b93594ee67 354 SUPERFAMILY SSF51569 6 346 1.47E-135 T 11-10-2018 syc0184_c 3f5c43acd89d691f9b7a3d87e0a5cde9 1190 SMART SM01018 651 733 9.5E-40 T 11-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 syc0184_c 3f5c43acd89d691f9b7a3d87e0a5cde9 1190 Pfam PF02574 Homocysteine S-methyltransferase 17 308 1.2E-65 T 11-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 syc0184_c 3f5c43acd89d691f9b7a3d87e0a5cde9 1190 Gene3D G3DSA:1.10.288.10 940 999 2.4E-67 T 11-10-2018 syc0184_c 3f5c43acd89d691f9b7a3d87e0a5cde9 1190 SUPERFAMILY SSF56507 909 1190 2.62E-101 T 11-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 syc0184_c 3f5c43acd89d691f9b7a3d87e0a5cde9 1190 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 943 1189 1.3E-39 T 11-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 syc0184_c 3f5c43acd89d691f9b7a3d87e0a5cde9 1190 Gene3D G3DSA:3.10.196.10 914 1189 2.4E-67 T 11-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 syc0184_c 3f5c43acd89d691f9b7a3d87e0a5cde9 1190 PIRSF PIRSF000381 1 1190 0.0 T 11-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 syc0184_c 3f5c43acd89d691f9b7a3d87e0a5cde9 1190 Gene3D G3DSA:3.20.20.330 10 324 2.7E-93 T 11-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 syc0184_c 3f5c43acd89d691f9b7a3d87e0a5cde9 1190 Pfam PF02310 B12 binding domain 741 857 7.8E-19 T 11-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 syc0184_c 3f5c43acd89d691f9b7a3d87e0a5cde9 1190 TIGRFAM TIGR02082 metH: methionine synthase 13 1189 0.0 T 11-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 syc0184_c 3f5c43acd89d691f9b7a3d87e0a5cde9 1190 Gene3D G3DSA:3.20.20.20 345 636 1.0E-99 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 syc0184_c 3f5c43acd89d691f9b7a3d87e0a5cde9 1190 Pfam PF02607 B12 binding domain 654 726 3.1E-23 T 11-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 syc0184_c 3f5c43acd89d691f9b7a3d87e0a5cde9 1190 Gene3D G3DSA:3.40.50.280 738 877 4.2E-39 T 11-10-2018 syc0184_c 3f5c43acd89d691f9b7a3d87e0a5cde9 1190 Gene3D G3DSA:1.10.1240.10 646 730 7.2E-29 T 11-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 syc0184_c 3f5c43acd89d691f9b7a3d87e0a5cde9 1190 SUPERFAMILY SSF51717 352 614 3.4E-78 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 syc0184_c 3f5c43acd89d691f9b7a3d87e0a5cde9 1190 SUPERFAMILY SSF47644 650 732 6.41E-24 T 11-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 syc0184_c 3f5c43acd89d691f9b7a3d87e0a5cde9 1190 Pfam PF00809 Pterin binding enzyme 356 587 5.4E-45 T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 syc0184_c 3f5c43acd89d691f9b7a3d87e0a5cde9 1190 SUPERFAMILY SSF82282 6 395 6.41E-108 T 11-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 syc0184_c 3f5c43acd89d691f9b7a3d87e0a5cde9 1190 SUPERFAMILY SSF52242 736 876 1.23E-39 T 11-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 syc1346_c f612aa29097ab51813523f65d17a3214 311 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 19 139 2.5E-22 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 syc1346_c f612aa29097ab51813523f65d17a3214 311 TIGRFAM TIGR00436 era: GTP-binding protein Era 18 289 3.1E-95 T 11-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc1346_c f612aa29097ab51813523f65d17a3214 311 Gene3D G3DSA:3.40.50.300 13 196 1.8E-41 T 11-10-2018 syc1346_c f612aa29097ab51813523f65d17a3214 311 Hamap MF_00367 GTPase Era [era]. 15 306 34.184 T 11-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc1346_c f612aa29097ab51813523f65d17a3214 311 SUPERFAMILY SSF54814 193 307 6.34E-41 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 syc1346_c f612aa29097ab51813523f65d17a3214 311 SUPERFAMILY SSF52540 20 217 6.62E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc1346_c f612aa29097ab51813523f65d17a3214 311 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 20 40 3.6E-6 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 syc1346_c f612aa29097ab51813523f65d17a3214 311 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 3.6E-6 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 syc1346_c f612aa29097ab51813523f65d17a3214 311 Pfam PF07650 KH domain 219 295 2.0E-19 T 11-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc1346_c f612aa29097ab51813523f65d17a3214 311 Gene3D G3DSA:3.30.300.20 197 307 6.3E-42 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta syc1346_c f612aa29097ab51813523f65d17a3214 311 Pfam PF01926 50S ribosome-binding GTPase 20 134 1.0E-22 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 syc2022_d 8bd5f7a89789f8014637b3b344297815 666 SMART SM00382 360 513 1.3E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain syc2022_d 8bd5f7a89789f8014637b3b344297815 666 SUPERFAMILY SSF52540 220 622 9.15E-94 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc2022_d 8bd5f7a89789f8014637b3b344297815 666 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 25 178 1.8E-14 T 11-10-2018 IPR007831 General secretory system II, protein E, N-terminal syc2022_d 8bd5f7a89789f8014637b3b344297815 666 Pfam PF00437 Type II/IV secretion system protein 232 499 6.5E-74 T 11-10-2018 IPR001482 Type II/IV secretion system protein syc2022_d 8bd5f7a89789f8014637b3b344297815 666 SUPERFAMILY SSF160246 17 162 9.29E-15 T 11-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily syc2022_d 8bd5f7a89789f8014637b3b344297815 666 Gene3D G3DSA:3.30.450.90 195 332 5.3E-47 T 11-10-2018 syc2022_d 8bd5f7a89789f8014637b3b344297815 666 Gene3D G3DSA:3.40.50.300 336 624 3.4E-105 T 11-10-2018 syc0520_d abdd84b41c204b00f4d17352e95d023b 584 Gene3D G3DSA:2.30.310.10 4 165 8.9E-36 T 11-10-2018 syc0520_d abdd84b41c204b00f4d17352e95d023b 584 Pfam PF05670 Domain of unknown function (DUF814) 462 546 5.3E-24 T 11-10-2018 IPR008532 Domain of unknown function DUF814 syc0520_d abdd84b41c204b00f4d17352e95d023b 584 Pfam PF05833 Fibronectin-binding protein A N-terminus (FbpA) 5 449 1.1E-126 T 11-10-2018 syc0255_c 1f6101a103f7b0943a872c71f58cb2c7 576 Pfam PF00990 Diguanylate cyclase, GGDEF domain 407 569 7.5E-38 T 11-10-2018 IPR000160 GGDEF domain syc0255_c 1f6101a103f7b0943a872c71f58cb2c7 576 SUPERFAMILY SSF55781 248 402 5.4E-7 T 11-10-2018 syc0255_c 1f6101a103f7b0943a872c71f58cb2c7 576 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 402 571 7.1E-42 T 11-10-2018 IPR000160 GGDEF domain syc0255_c 1f6101a103f7b0943a872c71f58cb2c7 576 SUPERFAMILY SSF55073 412 572 1.26E-38 T 11-10-2018 IPR029787 Nucleotide cyclase syc0255_c 1f6101a103f7b0943a872c71f58cb2c7 576 SMART SM00267 395 573 1.1E-50 T 11-10-2018 IPR000160 GGDEF domain syc0255_c 1f6101a103f7b0943a872c71f58cb2c7 576 Gene3D G3DSA:3.30.70.270 394 573 1.4E-48 T 11-10-2018 syc0401_d f77db5d2d8d29fce327d7f82dc09b546 325 Gene3D G3DSA:3.40.50.720 3 291 1.2E-109 T 11-10-2018 syc0401_d f77db5d2d8d29fce327d7f82dc09b546 325 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 299 5.4E-55 T 11-10-2018 IPR016040 NAD(P)-binding domain syc0401_d f77db5d2d8d29fce327d7f82dc09b546 325 SUPERFAMILY SSF51735 1 309 7.3E-92 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily syc0401_d f77db5d2d8d29fce327d7f82dc09b546 325 Gene3D G3DSA:3.90.25.10 183 302 1.2E-109 T 11-10-2018 syc1024_d 43d6144df72fbd0bc20acdc4e9954f78 229 Gene3D G3DSA:3.40.50.150 5 217 3.5E-22 T 11-10-2018 syc1024_d 43d6144df72fbd0bc20acdc4e9954f78 229 SUPERFAMILY SSF53335 46 212 3.98E-23 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase syc1024_d 43d6144df72fbd0bc20acdc4e9954f78 229 Pfam PF08241 Methyltransferase domain 68 167 1.9E-11 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 syc0210_c ce7b77b0ba20e04e53ee368cc650c3bd 372 Pfam PF00146 NADH dehydrogenase 35 360 1.7E-116 T 11-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc0210_c ce7b77b0ba20e04e53ee368cc650c3bd 372 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 231 244 - T 11-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc0210_c ce7b77b0ba20e04e53ee368cc650c3bd 372 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 72 87 - T 11-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc0210_c ce7b77b0ba20e04e53ee368cc650c3bd 372 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 26 366 23.937 T 11-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc1569_c 81703f0414ce77c85e34075794320d95 158 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 43 153 8.4E-46 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc1569_c 81703f0414ce77c85e34075794320d95 158 SUPERFAMILY SSF50104 42 155 1.0E-44 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily syc1569_c 81703f0414ce77c85e34075794320d95 158 PIRSF PIRSF002191 31 158 1.5E-50 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc1569_c 81703f0414ce77c85e34075794320d95 158 PRINTS PR00061 Ribosomal protein L19 signature 44 73 1.3E-39 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc1569_c 81703f0414ce77c85e34075794320d95 158 PRINTS PR00061 Ribosomal protein L19 signature 74 103 1.3E-39 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc1569_c 81703f0414ce77c85e34075794320d95 158 PRINTS PR00061 Ribosomal protein L19 signature 128 153 1.3E-39 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc1569_c 81703f0414ce77c85e34075794320d95 158 Gene3D G3DSA:2.30.30.790 50 157 1.2E-14 T 11-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc1569_c 81703f0414ce77c85e34075794320d95 158 Pfam PF01245 Ribosomal protein L19 44 153 1.6E-45 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc1569_c 81703f0414ce77c85e34075794320d95 158 ProSitePatterns PS01015 Ribosomal protein L19 signature. 126 141 - T 11-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc1569_c 81703f0414ce77c85e34075794320d95 158 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 42 154 31.557 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc1837_d 956ef40f4aad65992a4441aed093051a 113 Pfam PF03091 CutA1 divalent ion tolerance protein 15 110 2.8E-28 T 11-10-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 syc1837_d 956ef40f4aad65992a4441aed093051a 113 SUPERFAMILY SSF54913 12 112 1.67E-30 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta syc1837_d 956ef40f4aad65992a4441aed093051a 113 Gene3D G3DSA:3.30.70.120 2 113 2.8E-30 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal syc1676_d 658b9dba0a378d10fcce5ddfd4573fa9 381 Gene3D G3DSA:3.30.56.70 310 367 5.8E-11 T 11-10-2018 syc1676_d 658b9dba0a378d10fcce5ddfd4573fa9 381 Pfam PF02005 N2,N2-dimethylguanosine tRNA methyltransferase 16 362 1.6E-56 T 11-10-2018 IPR002905 tRNA methyltransferase, Trm1 GO:0003723|GO:0004809|GO:0008033 MetaCyc: PWY-6829 syc1676_d 658b9dba0a378d10fcce5ddfd4573fa9 381 Gene3D G3DSA:3.40.50.150 6 308 1.7E-59 T 11-10-2018 syc1676_d 658b9dba0a378d10fcce5ddfd4573fa9 381 SUPERFAMILY SSF53335 8 367 3.45E-76 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase syc0002_c 076a2e16730d625088be954b239715ff 342 TIGRFAM TIGR03041 PS_antenn_a_b: chlorophyll a/b binding light-harvesting protein 13 331 6.5E-148 T 11-10-2018 syc0002_c 076a2e16730d625088be954b239715ff 342 Pfam PF00421 Photosystem II protein 10 275 9.6E-62 T 11-10-2018 IPR000932 Photosystem antenna protein-like GO:0009521|GO:0009767|GO:0016020|GO:0016168|GO:0019684 syc0002_c 076a2e16730d625088be954b239715ff 342 SUPERFAMILY SSF161077 6 341 9.81E-132 T 11-10-2018 IPR036001 Photosystem antenna protein-like superfamily GO:0009521|GO:0009767|GO:0016020|GO:0016168|GO:0019684 syc2499_d dcabb49e36cdf69c787bfbfaa54f5d97 199 Pfam PF00849 RNA pseudouridylate synthase 5 151 1.6E-20 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 syc2499_d dcabb49e36cdf69c787bfbfaa54f5d97 199 SUPERFAMILY SSF55120 4 190 3.52E-41 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 syc2499_d dcabb49e36cdf69c787bfbfaa54f5d97 199 Gene3D G3DSA:3.30.70.580 2 70 7.8E-27 T 11-10-2018 syc2499_d dcabb49e36cdf69c787bfbfaa54f5d97 199 Gene3D G3DSA:3.30.70.1560 71 168 2.0E-36 T 11-10-2018 syc2499_d dcabb49e36cdf69c787bfbfaa54f5d97 199 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 42 56 - T 11-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 syc2499_d dcabb49e36cdf69c787bfbfaa54f5d97 199 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 9 187 2.7E-53 T 11-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 syc1179_c df06d23c4d148e6b873e51b1567ce01c 174 Hamap MF_01398 ATP synthase subunit b [atpF]. 19 156 12.151 T 11-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 syc1179_c df06d23c4d148e6b873e51b1567ce01c 174 Pfam PF00430 ATP synthase B/B' CF(0) 25 154 1.0E-36 T 11-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 syc1179_c df06d23c4d148e6b873e51b1567ce01c 174 SUPERFAMILY SSF81573 81 139 8.89E-7 T 11-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily syc2004_d ba4e690fb5a6bae47c27d805a63ea4a5 304 SMART SM00756 11 156 5.1E-50 T 11-10-2018 IPR012932 Vitamin K epoxide reductase Reactome: R-HSA-6806664 syc2004_d ba4e690fb5a6bae47c27d805a63ea4a5 304 SUPERFAMILY SSF52833 224 295 9.17E-13 T 11-10-2018 IPR036249 Thioredoxin-like superfamily syc2004_d ba4e690fb5a6bae47c27d805a63ea4a5 304 Gene3D G3DSA:3.40.30.10 207 303 3.6E-33 T 11-10-2018 syc2004_d ba4e690fb5a6bae47c27d805a63ea4a5 304 Gene3D G3DSA:1.20.1440.130 1 186 1.2E-58 T 11-10-2018 IPR038354 VKOR domain superfamily Reactome: R-HSA-6806664 syc2004_d ba4e690fb5a6bae47c27d805a63ea4a5 304 Pfam PF07884 Vitamin K epoxide reductase family 17 152 2.0E-31 T 11-10-2018 IPR012932 Vitamin K epoxide reductase Reactome: R-HSA-6806664 syc0001_c 94a0767bf6d3d13a46f5255c2aa5b39e 124 TIGRFAM TIGR01752 flav_long: flavodoxin 1 122 1.1E-58 T 11-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 syc0001_c 94a0767bf6d3d13a46f5255c2aa5b39e 124 Pfam PF00258 Flavodoxin 2 114 2.8E-20 T 11-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 syc0001_c 94a0767bf6d3d13a46f5255c2aa5b39e 124 SUPERFAMILY SSF52218 1 121 8.23E-35 T 11-10-2018 IPR029039 Flavoprotein-like superfamily syc0001_c 94a0767bf6d3d13a46f5255c2aa5b39e 124 PIRSF PIRSF038996 1 124 4.2E-53 T 11-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 syc0001_c 94a0767bf6d3d13a46f5255c2aa5b39e 124 Gene3D G3DSA:3.40.50.360 1 124 4.3E-37 T 11-10-2018 IPR029039 Flavoprotein-like superfamily syc0271_d 16141acf30da227e1a977f4e8a023021 327 Pfam PF06463 Molybdenum Cofactor Synthesis C 184 310 6.2E-36 T 11-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 syc0271_d 16141acf30da227e1a977f4e8a023021 327 Pfam PF13353 4Fe-4S single cluster domain 20 109 4.3E-5 T 11-10-2018 syc0271_d 16141acf30da227e1a977f4e8a023021 327 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 19 30 - T 11-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 syc0271_d 16141acf30da227e1a977f4e8a023021 327 SUPERFAMILY SSF102114 5 276 1.03E-65 T 11-10-2018 syc0271_d 16141acf30da227e1a977f4e8a023021 327 SMART SM00729 13 214 3.4E-4 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 syc0271_d 16141acf30da227e1a977f4e8a023021 327 Gene3D G3DSA:3.20.20.70 2 327 1.6E-78 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 syc0271_d 16141acf30da227e1a977f4e8a023021 327 Pfam PF04055 Radical SAM superfamily 19 179 8.5E-23 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 syc0271_d 16141acf30da227e1a977f4e8a023021 327 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 4 327 36.918 T 11-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 syc0271_d 16141acf30da227e1a977f4e8a023021 327 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 4 327 1.2E-105 T 11-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 syc0693_d 6e767e4ba796f16b24b21f8ba64a6444 370 Gene3D G3DSA:3.40.50.300 104 361 8.3E-84 T 11-10-2018 syc0693_d 6e767e4ba796f16b24b21f8ba64a6444 370 SMART SM00382 126 251 7.6E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain syc0693_d 6e767e4ba796f16b24b21f8ba64a6444 370 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 6 345 9.0E-118 T 11-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 syc0693_d 6e767e4ba796f16b24b21f8ba64a6444 370 Gene3D G3DSA:3.30.450.90 2 103 2.4E-22 T 11-10-2018 syc0693_d 6e767e4ba796f16b24b21f8ba64a6444 370 SUPERFAMILY SSF52540 4 340 4.91E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0693_d 6e767e4ba796f16b24b21f8ba64a6444 370 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 197 211 - T 11-10-2018 IPR001482 Type II/IV secretion system protein syc0693_d 6e767e4ba796f16b24b21f8ba64a6444 370 Pfam PF00437 Type II/IV secretion system protein 16 272 9.2E-45 T 11-10-2018 IPR001482 Type II/IV secretion system protein syc0926_d 423a0477956da0ca7d17effa96219d6c 285 Gene3D G3DSA:3.90.226.10 10 222 7.1E-77 T 11-10-2018 syc0926_d 423a0477956da0ca7d17effa96219d6c 285 TIGRFAM TIGR01929 menB: naphthoate synthase 18 280 6.2E-131 T 11-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 syc0926_d 423a0477956da0ca7d17effa96219d6c 285 Pfam PF00378 Enoyl-CoA hydratase/isomerase 27 280 1.7E-73 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 syc0926_d 423a0477956da0ca7d17effa96219d6c 285 SUPERFAMILY SSF52096 10 282 1.01E-74 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily syc0926_d 423a0477956da0ca7d17effa96219d6c 285 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 12 284 55.979 T 11-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 syc0926_d 423a0477956da0ca7d17effa96219d6c 285 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 123 143 - T 11-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 syc0926_d 423a0477956da0ca7d17effa96219d6c 285 Gene3D G3DSA:1.10.12.10 223 273 1.5E-26 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal syc1574_d 4fdefb6372d50d0257059b521cbe7a8f 177 PRINTS PR00625 DnaJ domain signature 27 42 4.0E-9 T 11-10-2018 IPR001623 DnaJ domain syc1574_d 4fdefb6372d50d0257059b521cbe7a8f 177 PRINTS PR00625 DnaJ domain signature 9 27 4.0E-9 T 11-10-2018 IPR001623 DnaJ domain syc1574_d 4fdefb6372d50d0257059b521cbe7a8f 177 PRINTS PR00625 DnaJ domain signature 43 63 4.0E-9 T 11-10-2018 IPR001623 DnaJ domain syc1574_d 4fdefb6372d50d0257059b521cbe7a8f 177 Gene3D G3DSA:1.10.287.110 2 66 2.2E-16 T 11-10-2018 IPR036869 Chaperone J-domain superfamily syc1574_d 4fdefb6372d50d0257059b521cbe7a8f 177 SMART SM00271 6 66 4.3E-13 T 11-10-2018 IPR001623 DnaJ domain syc1574_d 4fdefb6372d50d0257059b521cbe7a8f 177 SUPERFAMILY SSF46565 7 58 2.36E-15 T 11-10-2018 IPR036869 Chaperone J-domain superfamily syc1574_d 4fdefb6372d50d0257059b521cbe7a8f 177 SUPERFAMILY SSF48452 94 162 7.59E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc1574_d 4fdefb6372d50d0257059b521cbe7a8f 177 SMART SM00028 125 158 8.4E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc1574_d 4fdefb6372d50d0257059b521cbe7a8f 177 Pfam PF00226 DnaJ domain 10 58 2.5E-14 T 11-10-2018 IPR001623 DnaJ domain syc1574_d 4fdefb6372d50d0257059b521cbe7a8f 177 Pfam PF14559 Tetratricopeptide repeat 94 133 3.6E-6 T 11-10-2018 syc1574_d 4fdefb6372d50d0257059b521cbe7a8f 177 Gene3D G3DSA:1.25.40.10 92 177 2.0E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc1426_d 3af61dc1757d4915640ac71a4b603cff 149 Gene3D G3DSA:2.60.120.460 1 149 6.1E-44 T 11-10-2018 IPR035917 YjbQ-like superfamily syc1426_d 3af61dc1757d4915640ac71a4b603cff 149 ProSitePatterns PS01314 Uncharacterized protein family UPF0047 signature. 110 128 - T 11-10-2018 IPR001602 Uncharacterised protein family UPF0047 syc1426_d 3af61dc1757d4915640ac71a4b603cff 149 SUPERFAMILY SSF111038 2 148 8.11E-47 T 11-10-2018 IPR035917 YjbQ-like superfamily syc1426_d 3af61dc1757d4915640ac71a4b603cff 149 Pfam PF01894 Uncharacterised protein family UPF0047 19 146 7.7E-40 T 11-10-2018 IPR001602 Uncharacterised protein family UPF0047 syc1426_d 3af61dc1757d4915640ac71a4b603cff 149 PIRSF PIRSF004681 1 149 6.2E-53 T 11-10-2018 IPR001602 Uncharacterised protein family UPF0047 syc1426_d 3af61dc1757d4915640ac71a4b603cff 149 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 7 149 4.3E-43 T 11-10-2018 IPR001602 Uncharacterised protein family UPF0047 syc0343_d bfb9ab45c12dc222e493f666eae2a79b 87 SUPERFAMILY SSF143011 4 84 2.62E-27 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily syc0343_d bfb9ab45c12dc222e493f666eae2a79b 87 Pfam PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system 6 85 2.0E-41 T 11-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 syc0343_d bfb9ab45c12dc222e493f666eae2a79b 87 TIGRFAM TIGR02116 toxin_Txe_YoeB: addiction module toxin, Txe/YoeB family 6 85 4.3E-33 T 11-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 syc0343_d bfb9ab45c12dc222e493f666eae2a79b 87 Gene3D G3DSA:3.30.2310.20 2 85 3.8E-39 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily syc1309_d acb9a1e674b99b57f61d75898f8f0eda 439 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 169 224 - T 11-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 syc1309_d acb9a1e674b99b57f61d75898f8f0eda 439 Gene3D G3DSA:1.20.210.10 1 426 9.4E-116 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 syc1309_d acb9a1e674b99b57f61d75898f8f0eda 439 SUPERFAMILY SSF81442 2 421 1.27E-67 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 syc1309_d acb9a1e674b99b57f61d75898f8f0eda 439 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 2 399 4.0E-60 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 syc0181_d a234f833af15c182708c97d6a41b98c2 173 Gene3D G3DSA:3.40.50.360 2 167 2.1E-25 T 11-10-2018 IPR029039 Flavoprotein-like superfamily syc0181_d a234f833af15c182708c97d6a41b98c2 173 SUPERFAMILY SSF52218 1 148 2.19E-28 T 11-10-2018 IPR029039 Flavoprotein-like superfamily syc0181_d a234f833af15c182708c97d6a41b98c2 173 Pfam PF03358 NADPH-dependent FMN reductase 5 146 3.4E-26 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 syc1847_d 577e17e0580bf858de9cc779991c9352 194 Gene3D G3DSA:3.40.630.30 16 148 1.5E-10 T 11-10-2018 syc1109_d 071e5395ad7772bab54b1fe0ba3b4a02 80 SUPERFAMILY SSF81563 17 74 1.57E-19 T 11-10-2018 IPR035982 Photosystem I reaction centre subunit PsaK superfamily GO:0009522|GO:0015979|GO:0016020 syc1109_d 071e5395ad7772bab54b1fe0ba3b4a02 80 ProSitePatterns PS01026 Photosystem I psaG and psaK proteins signature. 50 67 - T 11-10-2018 IPR000549 Photosystem I PsaG/PsaK protein GO:0009522|GO:0015979|GO:0016020 syc1109_d 071e5395ad7772bab54b1fe0ba3b4a02 80 Gene3D G3DSA:1.20.860.20 6 80 7.1E-29 T 11-10-2018 IPR037101 Photosystem I reaction centre subunit PsaK GO:0009522|GO:0015979|GO:0042651 syc1109_d 071e5395ad7772bab54b1fe0ba3b4a02 80 Pfam PF01241 Photosystem I psaG / psaK 11 78 2.3E-21 T 11-10-2018 IPR000549 Photosystem I PsaG/PsaK protein GO:0009522|GO:0015979|GO:0016020 syc1109_d 071e5395ad7772bab54b1fe0ba3b4a02 80 TIGRFAM TIGR03049 PS_I_psaK: photosystem I reaction center subunit PsaK 1 80 2.6E-30 T 11-10-2018 IPR017492 Photosystem I PsaK, reaction centre GO:0009522|GO:0015979|GO:0042651 syc1109_d 071e5395ad7772bab54b1fe0ba3b4a02 80 Hamap MF_00474 Photosystem I reaction center subunit PsaK [psaK]. 7 80 21.087 T 11-10-2018 IPR017492 Photosystem I PsaK, reaction centre GO:0009522|GO:0015979|GO:0042651 syc0278_d 11353e966a9111f95aec2ea87b720817 175 Gene3D G3DSA:1.25.40.10 22 173 1.7E-24 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc0278_d 11353e966a9111f95aec2ea87b720817 175 Pfam PF13414 TPR repeat 97 137 3.7E-11 T 11-10-2018 syc0278_d 11353e966a9111f95aec2ea87b720817 175 SMART SM00028 51 83 120.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc0278_d 11353e966a9111f95aec2ea87b720817 175 SMART SM00028 124 157 3.5E-5 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc0278_d 11353e966a9111f95aec2ea87b720817 175 SMART SM00028 90 123 1.3E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc0278_d 11353e966a9111f95aec2ea87b720817 175 SUPERFAMILY SSF48452 42 164 5.42E-23 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc1545_d 5f4eeddcbf50cd4a30a00c5bc2163ac4 185 SMART SM00841 129 184 3.3E-34 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 syc1545_d 5f4eeddcbf50cd4a30a00c5bc2163ac4 185 Gene3D G3DSA:2.40.50.140 64 127 2.6E-24 T 11-10-2018 syc1545_d 5f4eeddcbf50cd4a30a00c5bc2163ac4 185 PIRSF PIRSF005901 1 185 5.8E-74 T 11-10-2018 IPR020599 Translation elongation factor P/YeiP syc1545_d 5f4eeddcbf50cd4a30a00c5bc2163ac4 185 Hamap MF_00141 Elongation factor P [efp]. 1 185 51.273 T 11-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 syc1545_d 5f4eeddcbf50cd4a30a00c5bc2163ac4 185 ProSitePatterns PS01275 Elongation factor P signature. 150 169 - T 11-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site syc1545_d 5f4eeddcbf50cd4a30a00c5bc2163ac4 185 SMART SM01185 67 121 2.1E-25 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 syc1545_d 5f4eeddcbf50cd4a30a00c5bc2163ac4 185 SUPERFAMILY SSF50249 65 129 1.16E-19 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold syc1545_d 5f4eeddcbf50cd4a30a00c5bc2163ac4 185 Pfam PF01132 Elongation factor P (EF-P) OB domain 69 121 2.1E-22 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 syc1545_d 5f4eeddcbf50cd4a30a00c5bc2163ac4 185 TIGRFAM TIGR00038 efp: translation elongation factor P 2 184 2.4E-78 T 11-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 syc1545_d 5f4eeddcbf50cd4a30a00c5bc2163ac4 185 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 60 8.5E-28 T 11-10-2018 IPR013185 Translation elongation factor, KOW-like syc1545_d 5f4eeddcbf50cd4a30a00c5bc2163ac4 185 SUPERFAMILY SSF50249 129 184 2.57E-18 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold syc1545_d 5f4eeddcbf50cd4a30a00c5bc2163ac4 185 SUPERFAMILY SSF50104 1 62 8.42E-21 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily syc1545_d 5f4eeddcbf50cd4a30a00c5bc2163ac4 185 Gene3D G3DSA:2.30.30.30 1 62 7.9E-31 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 syc1545_d 5f4eeddcbf50cd4a30a00c5bc2163ac4 185 Pfam PF09285 Elongation factor P, C-terminal 129 184 7.2E-27 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 syc1545_d 5f4eeddcbf50cd4a30a00c5bc2163ac4 185 Gene3D G3DSA:2.40.50.140 128 185 4.4E-26 T 11-10-2018 syc0286_d 4d162ff9a9cf53d85590dcbad7a827ef 237 SUPERFAMILY SSF116726 131 220 2.62E-7 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 syc0286_d 4d162ff9a9cf53d85590dcbad7a827ef 237 Pfam PF02080 TrkA-C domain 149 220 2.4E-8 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 syc0286_d 4d162ff9a9cf53d85590dcbad7a827ef 237 Gene3D G3DSA:3.40.50.720 1 134 1.2E-31 T 11-10-2018 syc0286_d 4d162ff9a9cf53d85590dcbad7a827ef 237 Gene3D G3DSA:3.30.70.1450 135 223 3.7E-10 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 syc0286_d 4d162ff9a9cf53d85590dcbad7a827ef 237 SUPERFAMILY SSF51735 1 144 1.65E-31 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily syc0286_d 4d162ff9a9cf53d85590dcbad7a827ef 237 Pfam PF02254 TrkA-N domain 3 117 3.7E-23 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 syc2192_d b6c770f882f7debd108f3af324f36086 376 SUPERFAMILY SSF53335 176 346 3.96E-27 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase syc2192_d b6c770f882f7debd108f3af324f36086 376 Gene3D G3DSA:3.40.50.150 154 352 2.0E-45 T 11-10-2018 syc2192_d b6c770f882f7debd108f3af324f36086 376 Pfam PF13489 Methyltransferase domain 176 324 2.6E-17 T 11-10-2018 syc2404_c e9a11e9f5dcd7d00dfc7596dfc5ee313 341 Pfam PF13531 Bacterial extracellular solute-binding protein 37 290 2.7E-36 T 11-10-2018 syc2404_c e9a11e9f5dcd7d00dfc7596dfc5ee313 341 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 158 166 - T 11-10-2018 IPR034408 Sulphate/thiosulphate-binding site GO:1901681 syc2404_c e9a11e9f5dcd7d00dfc7596dfc5ee313 341 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 33 335 6.6E-80 T 11-10-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 syc2404_c e9a11e9f5dcd7d00dfc7596dfc5ee313 341 SUPERFAMILY SSF53850 35 336 9.45E-67 T 11-10-2018 syc2404_c e9a11e9f5dcd7d00dfc7596dfc5ee313 341 Gene3D G3DSA:3.40.190.10 40 305 5.1E-112 T 11-10-2018 syc2404_c e9a11e9f5dcd7d00dfc7596dfc5ee313 341 Gene3D G3DSA:3.40.190.10 127 335 5.1E-112 T 11-10-2018 syc0892_d e837bf7bd3560e1fd764b6540eca76e7 237 PIRSF PIRSF002155 1 227 2.2E-73 T 11-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc0892_d e837bf7bd3560e1fd764b6540eca76e7 237 SUPERFAMILY SSF56808 12 227 1.7E-76 T 11-10-2018 IPR023674 Ribosomal protein L1-like syc0892_d e837bf7bd3560e1fd764b6540eca76e7 237 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 4 228 4.4E-96 T 11-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 syc0892_d e837bf7bd3560e1fd764b6540eca76e7 237 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 11-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc0892_d e837bf7bd3560e1fd764b6540eca76e7 237 Pfam PF00687 Ribosomal protein L1p/L10e family 30 220 1.7E-50 T 11-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein syc0892_d e837bf7bd3560e1fd764b6540eca76e7 237 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 3 229 41.139 T 11-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 syc0892_d e837bf7bd3560e1fd764b6540eca76e7 237 Gene3D G3DSA:3.40.50.790 68 159 1.6E-77 T 11-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich syc0892_d e837bf7bd3560e1fd764b6540eca76e7 237 Gene3D G3DSA:3.30.190.20 26 222 1.6E-77 T 11-10-2018 syc2182_c eb95fc2e4601713bcdff0660147a0e22 29 TIGRFAM TIGR03053 PS_I_psaM: photosystem I reaction center subunit XII 1 29 2.4E-18 T 11-10-2018 IPR010010 Photosystem I PsaM, reaction centre GO:0015979 syc2182_c eb95fc2e4601713bcdff0660147a0e22 29 SUPERFAMILY SSF81548 1 29 4.32E-11 T 11-10-2018 IPR037279 Photosystem I PsaM, reaction centre superfamily GO:0015979 syc2182_c eb95fc2e4601713bcdff0660147a0e22 29 Hamap MF_00828 Photosystem I reaction center subunit XII [psaM]. 1 29 14.871 T 11-10-2018 IPR010010 Photosystem I PsaM, reaction centre GO:0015979 syc2182_c eb95fc2e4601713bcdff0660147a0e22 29 Pfam PF07465 Photosystem I protein M (PsaM) 1 29 2.1E-16 T 11-10-2018 IPR010010 Photosystem I PsaM, reaction centre GO:0015979 syc0680_c 456e34559348f0e446ff11de2cb7f655 319 Gene3D G3DSA:2.40.50.180 41 118 5.1E-8 T 11-10-2018 syc0680_c 456e34559348f0e446ff11de2cb7f655 319 Pfam PF01584 CheW-like domain 22 150 2.1E-13 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 syc0680_c 456e34559348f0e446ff11de2cb7f655 319 Gene3D G3DSA:2.30.30.40 24 136 5.1E-8 T 11-10-2018 syc0680_c 456e34559348f0e446ff11de2cb7f655 319 SUPERFAMILY SSF50341 16 147 7.85E-12 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 syc0680_c 456e34559348f0e446ff11de2cb7f655 319 SMART SM00260 18 172 0.004 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 syc2105_d e94c199c55f0c950eb22dfa2fa2d135a 133 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 82 90 6.8E-8 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 syc2105_d e94c199c55f0c950eb22dfa2fa2d135a 133 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 91 100 6.8E-8 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 syc2105_d e94c199c55f0c950eb22dfa2fa2d135a 133 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 14 28 6.8E-8 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 syc2105_d e94c199c55f0c950eb22dfa2fa2d135a 133 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 11 132 20.228 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 syc2105_d e94c199c55f0c950eb22dfa2fa2d135a 133 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 11 126 2.5E-33 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 syc2105_d e94c199c55f0c950eb22dfa2fa2d135a 133 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 11 130 3.2E-31 T 11-10-2018 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L syc2105_d e94c199c55f0c950eb22dfa2fa2d135a 133 Gene3D G3DSA:1.10.1200.120 11 104 1.8E-29 T 11-10-2018 IPR036019 Gated mechanosensitive channel syc2105_d e94c199c55f0c950eb22dfa2fa2d135a 133 SUPERFAMILY SSF81330 20 115 2.62E-28 T 11-10-2018 IPR036019 Gated mechanosensitive channel syc1108_c 0f9d68c094f607c2d0ddeae46313d2fb 217 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 3 213 37.91 T 11-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 syc1108_c 0f9d68c094f607c2d0ddeae46313d2fb 217 SUPERFAMILY SSF51366 4 210 2.83E-53 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 syc1108_c 0f9d68c094f607c2d0ddeae46313d2fb 217 Gene3D G3DSA:3.20.20.70 2 214 3.0E-61 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 syc1108_c 0f9d68c094f607c2d0ddeae46313d2fb 217 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 5 207 3.4E-43 T 11-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 syc0320_d 775415f365c4dc16a722a6b9bbc2288d 289 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 14 273 1.2E-78 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 syc0320_d 775415f365c4dc16a722a6b9bbc2288d 289 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 142 154 - T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 syc0320_d 775415f365c4dc16a722a6b9bbc2288d 289 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 13 270 18.162 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 syc0320_d 775415f365c4dc16a722a6b9bbc2288d 289 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 16 265 5.0E-80 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 syc0606_d e87ea2dd57d66cb1586c309bd52b5e69 181 Gene3D G3DSA:3.40.250.10 16 113 3.7E-24 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily syc0606_d e87ea2dd57d66cb1586c309bd52b5e69 181 Pfam PF00581 Rhodanese-like domain 18 105 3.1E-12 T 11-10-2018 IPR001763 Rhodanese-like domain syc0606_d e87ea2dd57d66cb1586c309bd52b5e69 181 SMART SM00450 16 109 3.0E-20 T 11-10-2018 IPR001763 Rhodanese-like domain syc0606_d e87ea2dd57d66cb1586c309bd52b5e69 181 Pfam PF11127 Protein of unknown function (DUF2892) 123 173 5.4E-6 T 11-10-2018 IPR021309 Protein of unknown function DUF2892 syc0606_d e87ea2dd57d66cb1586c309bd52b5e69 181 SUPERFAMILY SSF52821 12 162 4.45E-29 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily syc1661_d 910c58690c586bf5e96c6164f47cb4d5 337 Pfam PF12849 PBP superfamily domain 30 282 1.2E-40 T 11-10-2018 IPR024370 PBP domain syc1661_d 910c58690c586bf5e96c6164f47cb4d5 337 Gene3D G3DSA:3.40.190.10 116 258 3.4E-93 T 11-10-2018 syc1661_d 910c58690c586bf5e96c6164f47cb4d5 337 Gene3D G3DSA:3.40.190.10 37 294 3.4E-93 T 11-10-2018 syc1661_d 910c58690c586bf5e96c6164f47cb4d5 337 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 27 296 9.2E-90 T 11-10-2018 IPR011862 Phosphate binding protein GO:0042301 syc1661_d 910c58690c586bf5e96c6164f47cb4d5 337 SUPERFAMILY SSF53850 37 310 6.96E-80 T 11-10-2018 syc0161_c 9da108c56f8a492bd1f98cac63873008 587 Gene3D G3DSA:2.30.42.10 476 585 5.8E-22 T 11-10-2018 syc0161_c 9da108c56f8a492bd1f98cac63873008 587 SUPERFAMILY SSF50156 467 557 3.02E-13 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 syc0161_c 9da108c56f8a492bd1f98cac63873008 587 Gene3D G3DSA:2.60.40.3650 17 183 1.7E-55 T 11-10-2018 syc0161_c 9da108c56f8a492bd1f98cac63873008 587 Pfam PF05299 M61 glycyl aminopeptidase 271 387 1.5E-45 T 11-10-2018 IPR007963 Peptidase M61, catalytic domain syc0161_c 9da108c56f8a492bd1f98cac63873008 587 Pfam PF13180 PDZ domain 478 553 2.4E-12 T 11-10-2018 IPR001478 PDZ domain GO:0005515 syc0161_c 9da108c56f8a492bd1f98cac63873008 587 SUPERFAMILY SSF55486 197 449 5.35E-24 T 11-10-2018 syc0161_c 9da108c56f8a492bd1f98cac63873008 587 Gene3D G3DSA:1.10.390.60 186 451 6.6E-94 T 11-10-2018 syc0161_c 9da108c56f8a492bd1f98cac63873008 587 PIRSF PIRSF016493 13 582 4.9E-225 T 11-10-2018 IPR024191 Peptidase M61 syc0161_c 9da108c56f8a492bd1f98cac63873008 587 SMART SM00228 461 544 2.0E-8 T 11-10-2018 IPR001478 PDZ domain GO:0005515 syc0781_c 8ac6d5ca8fb63049b3f36fb43e1618f9 306 Pfam PF06995 Phage P2 GpU 9 128 3.5E-39 T 11-10-2018 IPR009734 Myoviridae, GpU syc2388_d 66efa1991a51c4b4d6218725f669093c 1015 Gene3D G3DSA:2.70.98.30 670 911 4.9E-18 T 11-10-2018 syc2388_d 66efa1991a51c4b4d6218725f669093c 1015 SUPERFAMILY SSF88688 491 590 6.87E-29 T 11-10-2018 IPR028995 Glycoside hydrolase families 57/38, central domain superfamily syc2388_d 66efa1991a51c4b4d6218725f669093c 1015 SUPERFAMILY SSF88713 229 490 2.71E-67 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 syc2388_d 66efa1991a51c4b4d6218725f669093c 1015 SUPERFAMILY SSF74650 594 1008 2.1E-79 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 syc2388_d 66efa1991a51c4b4d6218725f669093c 1015 SMART SM00872 492 570 7.6E-38 T 11-10-2018 IPR015341 Glycoside hydrolase family 38, central domain GO:0004559|GO:0006013 syc2388_d 66efa1991a51c4b4d6218725f669093c 1015 Gene3D G3DSA:1.20.1270.50 495 593 1.0E-28 T 11-10-2018 IPR037094 Glycoside hydrolase family 38, central domain superfamily GO:0004559|GO:0006013 syc2388_d 66efa1991a51c4b4d6218725f669093c 1015 Pfam PF09261 Alpha mannosidase middle domain 492 570 2.4E-27 T 11-10-2018 IPR015341 Glycoside hydrolase family 38, central domain GO:0004559|GO:0006013 syc2388_d 66efa1991a51c4b4d6218725f669093c 1015 Gene3D G3DSA:3.20.110.10 224 492 2.9E-55 T 11-10-2018 IPR027291 Glycoside hydrolase 38, N-terminal domain superfamily syc2388_d 66efa1991a51c4b4d6218725f669093c 1015 Pfam PF01074 Glycosyl hydrolases family 38 N-terminal domain 231 478 4.8E-79 T 11-10-2018 IPR000602 Glycoside hydrolase family 38, N-terminal domain GO:0004559|GO:0006013 syc2388_d 66efa1991a51c4b4d6218725f669093c 1015 Pfam PF07748 Glycosyl hydrolases family 38 C-terminal domain 604 1006 1.5E-64 T 11-10-2018 IPR011682 Glycosyl hydrolase family 38, C-terminal GO:0004559|GO:0006013 syc0577_c b30db5707db14e01b44c67da6bba803c 320 Gene3D G3DSA:3.30.540.10 8 184 6.2E-50 T 11-10-2018 syc0577_c b30db5707db14e01b44c67da6bba803c 320 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 257 271 - T 11-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 syc0577_c b30db5707db14e01b44c67da6bba803c 320 Gene3D G3DSA:3.40.190.80 185 313 1.9E-36 T 11-10-2018 syc0577_c b30db5707db14e01b44c67da6bba803c 320 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 117 130 - T 11-10-2018 IPR020583 Inositol monophosphatase, metal-binding site syc0577_c b30db5707db14e01b44c67da6bba803c 320 Pfam PF00459 Inositol monophosphatase family 13 312 3.3E-49 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 syc0577_c b30db5707db14e01b44c67da6bba803c 320 PRINTS PR00377 Inositol monophosphatase superfamily signature 64 80 2.0E-8 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 syc0577_c b30db5707db14e01b44c67da6bba803c 320 PRINTS PR00377 Inositol monophosphatase superfamily signature 42 62 2.0E-8 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 syc0577_c b30db5707db14e01b44c67da6bba803c 320 PRINTS PR00377 Inositol monophosphatase superfamily signature 254 278 2.0E-8 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 syc0577_c b30db5707db14e01b44c67da6bba803c 320 SUPERFAMILY SSF56655 10 311 2.23E-71 T 11-10-2018 syc1902_d 6f13d914684a59832991fae6888b538a 615 Pfam PF05226 CHASE2 domain 33 328 3.8E-41 T 11-10-2018 IPR007890 CHASE2 syc1902_d 6f13d914684a59832991fae6888b538a 615 Gene3D G3DSA:3.30.70.1230 420 607 2.0E-56 T 11-10-2018 IPR029787 Nucleotide cyclase syc1902_d 6f13d914684a59832991fae6888b538a 615 SUPERFAMILY SSF55073 425 602 7.53E-53 T 11-10-2018 IPR029787 Nucleotide cyclase syc1902_d 6f13d914684a59832991fae6888b538a 615 SMART SM00044 402 595 1.0E-16 T 11-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 syc1902_d 6f13d914684a59832991fae6888b538a 615 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 433 597 1.7E-26 T 11-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 syc1902_d 6f13d914684a59832991fae6888b538a 615 SMART SM01080 38 333 2.1E-64 T 11-10-2018 IPR007890 CHASE2 syc0542_c 53390cb6c90fae8de72e59094dadd107 517 PRINTS PR00095 Anthranilate synthase component I signature 340 353 1.3E-21 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 syc0542_c 53390cb6c90fae8de72e59094dadd107 517 PRINTS PR00095 Anthranilate synthase component I signature 449 463 1.3E-21 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 syc0542_c 53390cb6c90fae8de72e59094dadd107 517 PRINTS PR00095 Anthranilate synthase component I signature 354 367 1.3E-21 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 syc0542_c 53390cb6c90fae8de72e59094dadd107 517 PRINTS PR00095 Anthranilate synthase component I signature 434 448 1.3E-21 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 syc0542_c 53390cb6c90fae8de72e59094dadd107 517 Pfam PF00425 chorismate binding enzyme 232 496 3.3E-92 T 11-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal syc0542_c 53390cb6c90fae8de72e59094dadd107 517 Gene3D G3DSA:3.60.120.10 2 510 2.7E-174 T 11-10-2018 IPR005801 ADC synthase GO:0009058 syc0542_c 53390cb6c90fae8de72e59094dadd107 517 SUPERFAMILY SSF56322 17 504 5.36E-158 T 11-10-2018 IPR005801 ADC synthase GO:0009058 syc0542_c 53390cb6c90fae8de72e59094dadd107 517 Pfam PF04715 Anthranilate synthase component I, N terminal region 28 169 3.5E-28 T 11-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 syc0718_c 976d8f8303e19f6028430576ac1006bf 533 SUPERFAMILY SSF53850 31 526 2.9E-110 T 11-10-2018 syc0718_c 976d8f8303e19f6028430576ac1006bf 533 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 76 438 5.6E-78 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain syc0718_c 976d8f8303e19f6028430576ac1006bf 533 Gene3D G3DSA:3.10.105.10 277 499 1.9E-46 T 11-10-2018 syc0718_c 976d8f8303e19f6028430576ac1006bf 533 PIRSF PIRSF002741 22 524 1.2E-75 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 syc0718_c 976d8f8303e19f6028430576ac1006bf 533 Gene3D G3DSA:3.40.190.10 24 272 2.2E-56 T 11-10-2018 syc1267_c 1adfee1aa12cacef447d730e11944b88 359 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 56 270 7.5E-30 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF syc1267_c 1adfee1aa12cacef447d730e11944b88 359 SMART SM00062 53 282 2.5E-41 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF syc1267_c 1adfee1aa12cacef447d730e11944b88 359 SUPERFAMILY SSF53850 45 275 2.95E-43 T 11-10-2018 syc1267_c 1adfee1aa12cacef447d730e11944b88 359 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 76 89 - T 11-10-2018 IPR018313 Solute-binding protein family 3, conserved site syc1267_c 1adfee1aa12cacef447d730e11944b88 359 Gene3D G3DSA:3.40.190.10 43 274 6.5E-48 T 11-10-2018 syc1267_c 1adfee1aa12cacef447d730e11944b88 359 Gene3D G3DSA:3.40.190.10 147 242 6.5E-48 T 11-10-2018 syc0220_c 7681de21ab79a4660390e7b97a176f82 465 Pfam PF00425 chorismate binding enzyme 198 454 8.3E-96 T 11-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal syc0220_c 7681de21ab79a4660390e7b97a176f82 465 Pfam PF04715 Anthranilate synthase component I, N terminal region 19 147 6.5E-18 T 11-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 syc0220_c 7681de21ab79a4660390e7b97a176f82 465 SUPERFAMILY SSF56322 15 463 4.19E-136 T 11-10-2018 IPR005801 ADC synthase GO:0009058 syc0220_c 7681de21ab79a4660390e7b97a176f82 465 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 101 458 2.1E-100 T 11-10-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 syc0220_c 7681de21ab79a4660390e7b97a176f82 465 Gene3D G3DSA:3.60.120.10 2 465 1.2E-147 T 11-10-2018 IPR005801 ADC synthase GO:0009058 syc0220_c 7681de21ab79a4660390e7b97a176f82 465 PRINTS PR00095 Anthranilate synthase component I signature 302 315 3.6E-13 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 syc0220_c 7681de21ab79a4660390e7b97a176f82 465 PRINTS PR00095 Anthranilate synthase component I signature 411 425 3.6E-13 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 syc0220_c 7681de21ab79a4660390e7b97a176f82 465 PRINTS PR00095 Anthranilate synthase component I signature 316 329 3.6E-13 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 syc0220_c 7681de21ab79a4660390e7b97a176f82 465 PRINTS PR00095 Anthranilate synthase component I signature 396 410 3.6E-13 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 syc2008_d 1b37dc5c58559dc51b15dff4b814a42d 358 SUPERFAMILY SSF52540 1 263 5.26E-18 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc2008_d 1b37dc5c58559dc51b15dff4b814a42d 358 Pfam PF02374 Anion-transporting ATPase 3 156 1.9E-19 T 11-10-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 syc2008_d 1b37dc5c58559dc51b15dff4b814a42d 358 Gene3D G3DSA:2.60.40.790 289 358 1.8E-23 T 11-10-2018 IPR008978 HSP20-like chaperone syc1849_d 22fe323036fad83d5ce795c187161296 144 Gene3D G3DSA:3.30.360.110 18 78 9.8E-22 T 11-10-2018 syc1849_d 22fe323036fad83d5ce795c187161296 144 Gene3D G3DSA:3.30.160.750 79 140 4.7E-20 T 11-10-2018 syc1849_d 22fe323036fad83d5ce795c187161296 144 Hamap MF_00464 S-adenosylmethionine decarboxylase proenzyme [speH]. 17 133 29.403 T 11-10-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 syc1849_d 22fe323036fad83d5ce795c187161296 144 TIGRFAM TIGR03330 SAM_DCase_Bsu: S-adenosylmethionine decarboxylase proenzyme 19 128 1.1E-42 T 11-10-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 syc1849_d 22fe323036fad83d5ce795c187161296 144 SUPERFAMILY SSF56276 19 128 6.67E-43 T 11-10-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 syc1849_d 22fe323036fad83d5ce795c187161296 144 Pfam PF02675 S-adenosylmethionine decarboxylase 23 128 1.5E-40 T 11-10-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 syc0969_c 958e7611be2fef8911e0525f9b1fc332 372 Gene3D G3DSA:3.40.50.2000 191 352 1.0E-134 T 11-10-2018 syc0969_c 958e7611be2fef8911e0525f9b1fc332 372 SUPERFAMILY SSF53756 6 369 1.99E-124 T 11-10-2018 syc0969_c 958e7611be2fef8911e0525f9b1fc332 372 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 6 364 1.6E-158 T 11-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 syc0969_c 958e7611be2fef8911e0525f9b1fc332 372 Gene3D G3DSA:3.40.50.2000 8 363 1.0E-134 T 11-10-2018 syc0969_c 958e7611be2fef8911e0525f9b1fc332 372 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 27 363 3.4E-108 T 11-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 syc0627_d 48e87280a3cf48d181c9ff63a9b8dc0b 149 PIRSF PIRSF001399 1 146 2.4E-60 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 syc0627_d 48e87280a3cf48d181c9ff63a9b8dc0b 149 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 149 70.519 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 syc0627_d 48e87280a3cf48d181c9ff63a9b8dc0b 149 Pfam PF01220 Dehydroquinase class II 3 139 7.2E-61 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 syc0627_d 48e87280a3cf48d181c9ff63a9b8dc0b 149 SUPERFAMILY SSF52304 3 144 1.31E-60 T 11-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 syc0627_d 48e87280a3cf48d181c9ff63a9b8dc0b 149 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 3 143 6.2E-62 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 syc0627_d 48e87280a3cf48d181c9ff63a9b8dc0b 149 Gene3D G3DSA:3.40.50.9100 1 146 4.8E-65 T 11-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 syc0627_d 48e87280a3cf48d181c9ff63a9b8dc0b 149 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 4 141 7.0E-75 T 11-10-2018 syc0627_d 48e87280a3cf48d181c9ff63a9b8dc0b 149 ProSitePatterns PS01029 Dehydroquinase class II signature. 7 24 - T 11-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 syc1771_c 538625f94decfdb64abb15e55c5b6b9f 215 Gene3D G3DSA:1.20.810.10 1 215 4.4E-95 T 11-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 syc1771_c 538625f94decfdb64abb15e55c5b6b9f 215 Pfam PF00033 Cytochrome b/b6/petB 22 210 1.6E-83 T 11-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 syc1771_c 538625f94decfdb64abb15e55c5b6b9f 215 SUPERFAMILY SSF81342 5 215 1.15E-71 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 syc1771_c 538625f94decfdb64abb15e55c5b6b9f 215 PIRSF PIRSF000032 1 215 7.9E-123 T 11-10-2018 syc1771_c 538625f94decfdb64abb15e55c5b6b9f 215 Hamap MF_00633 Cytochrome b6 [petB]. 1 215 44.037 T 11-10-2018 IPR023530 Cytochrome b6, PetB GO:0005506|GO:0016021|GO:0020037|GO:0022900|GO:0045158 syc1098_d 0cd1f77f777ea390a002183b5e51a83b 320 PIRSF PIRSF001619 1 319 1.1E-125 T 11-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 syc1098_d 0cd1f77f777ea390a002183b5e51a83b 320 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 222 311 1.1E-17 T 11-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 syc1098_d 0cd1f77f777ea390a002183b5e51a83b 320 Hamap MF_01694 Biotin synthase [bioB]. 6 315 41.089 T 11-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 syc1098_d 0cd1f77f777ea390a002183b5e51a83b 320 SUPERFAMILY SSF102114 6 312 8.5E-88 T 11-10-2018 syc1098_d 0cd1f77f777ea390a002183b5e51a83b 320 SMART SM00729 44 257 5.4E-38 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 syc1098_d 0cd1f77f777ea390a002183b5e51a83b 320 Gene3D G3DSA:3.20.20.70 5 316 2.7E-118 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 syc1098_d 0cd1f77f777ea390a002183b5e51a83b 320 SMART SM00876 222 314 4.0E-43 T 11-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 syc1098_d 0cd1f77f777ea390a002183b5e51a83b 320 TIGRFAM TIGR00433 bioB: biotin synthase 16 312 1.4E-114 T 11-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 syc1098_d 0cd1f77f777ea390a002183b5e51a83b 320 Pfam PF04055 Radical SAM superfamily 50 199 5.0E-16 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 syc2501_c 54f07617d4d6a70b6b2342862a84e5d8 215 SUPERFAMILY SSF53254 1 176 5.63E-44 T 11-10-2018 IPR029033 Histidine phosphatase superfamily syc2501_c 54f07617d4d6a70b6b2342862a84e5d8 215 SMART SM00855 2 159 3.7E-18 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 syc2501_c 54f07617d4d6a70b6b2342862a84e5d8 215 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 174 7.5E-39 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 syc2501_c 54f07617d4d6a70b6b2342862a84e5d8 215 Gene3D G3DSA:3.40.50.1240 2 200 9.7E-44 T 11-10-2018 IPR029033 Histidine phosphatase superfamily syc2501_c 54f07617d4d6a70b6b2342862a84e5d8 215 PIRSF PIRSF000709 3 185 1.3E-16 T 11-10-2018 syc0319_d 064f91c6ec2c6f2cec4fb1bf2467d96d 324 Gene3D G3DSA:2.60.40.830 42 289 8.2E-116 T 11-10-2018 IPR036826 Cytochrome f large domain superfamily syc0319_d 064f91c6ec2c6f2cec4fb1bf2467d96d 324 Gene3D G3DSA:2.40.50.100 213 269 8.2E-116 T 11-10-2018 syc0319_d 064f91c6ec2c6f2cec4fb1bf2467d96d 324 Gene3D G3DSA:1.20.5.700 290 324 4.1E-16 T 11-10-2018 syc0319_d 064f91c6ec2c6f2cec4fb1bf2467d96d 324 Pfam PF01333 Apocytochrome F, C-terminal 208 324 2.2E-48 T 11-10-2018 IPR002325 Cytochrome f GO:0005506|GO:0009055|GO:0015979|GO:0020037|GO:0031361 syc0319_d 064f91c6ec2c6f2cec4fb1bf2467d96d 324 Hamap MF_00610 Cytochrome f [petA]. 10 323 58.221 T 11-10-2018 IPR002325 Cytochrome f GO:0005506|GO:0009055|GO:0015979|GO:0020037|GO:0031361 syc0319_d 064f91c6ec2c6f2cec4fb1bf2467d96d 324 SUPERFAMILY SSF103431 287 324 3.14E-15 T 11-10-2018 IPR024058 Cytochrome f transmembrane anchor syc0319_d 064f91c6ec2c6f2cec4fb1bf2467d96d 324 PRINTS PR00610 Cytochrome F signature 153 173 7.6E-130 T 11-10-2018 IPR002325 Cytochrome f GO:0005506|GO:0009055|GO:0015979|GO:0020037|GO:0031361 syc0319_d 064f91c6ec2c6f2cec4fb1bf2467d96d 324 PRINTS PR00610 Cytochrome F signature 132 152 7.6E-130 T 11-10-2018 IPR002325 Cytochrome f GO:0005506|GO:0009055|GO:0015979|GO:0020037|GO:0031361 syc0319_d 064f91c6ec2c6f2cec4fb1bf2467d96d 324 PRINTS PR00610 Cytochrome F signature 50 69 7.6E-130 T 11-10-2018 IPR002325 Cytochrome f GO:0005506|GO:0009055|GO:0015979|GO:0020037|GO:0031361 syc0319_d 064f91c6ec2c6f2cec4fb1bf2467d96d 324 PRINTS PR00610 Cytochrome F signature 305 322 7.6E-130 T 11-10-2018 IPR002325 Cytochrome f GO:0005506|GO:0009055|GO:0015979|GO:0020037|GO:0031361 syc0319_d 064f91c6ec2c6f2cec4fb1bf2467d96d 324 PRINTS PR00610 Cytochrome F signature 111 131 7.6E-130 T 11-10-2018 IPR002325 Cytochrome f GO:0005506|GO:0009055|GO:0015979|GO:0020037|GO:0031361 syc0319_d 064f91c6ec2c6f2cec4fb1bf2467d96d 324 PRINTS PR00610 Cytochrome F signature 37 48 7.6E-130 T 11-10-2018 IPR002325 Cytochrome f GO:0005506|GO:0009055|GO:0015979|GO:0020037|GO:0031361 syc0319_d 064f91c6ec2c6f2cec4fb1bf2467d96d 324 PRINTS PR00610 Cytochrome F signature 242 262 7.6E-130 T 11-10-2018 IPR002325 Cytochrome f GO:0005506|GO:0009055|GO:0015979|GO:0020037|GO:0031361 syc0319_d 064f91c6ec2c6f2cec4fb1bf2467d96d 324 PRINTS PR00610 Cytochrome F signature 91 110 7.6E-130 T 11-10-2018 IPR002325 Cytochrome f GO:0005506|GO:0009055|GO:0015979|GO:0020037|GO:0031361 syc0319_d 064f91c6ec2c6f2cec4fb1bf2467d96d 324 PRINTS PR00610 Cytochrome F signature 195 218 7.6E-130 T 11-10-2018 IPR002325 Cytochrome f GO:0005506|GO:0009055|GO:0015979|GO:0020037|GO:0031361 syc0319_d 064f91c6ec2c6f2cec4fb1bf2467d96d 324 PRINTS PR00610 Cytochrome F signature 284 304 7.6E-130 T 11-10-2018 IPR002325 Cytochrome f GO:0005506|GO:0009055|GO:0015979|GO:0020037|GO:0031361 syc0319_d 064f91c6ec2c6f2cec4fb1bf2467d96d 324 PRINTS PR00610 Cytochrome F signature 174 194 7.6E-130 T 11-10-2018 IPR002325 Cytochrome f GO:0005506|GO:0009055|GO:0015979|GO:0020037|GO:0031361 syc0319_d 064f91c6ec2c6f2cec4fb1bf2467d96d 324 PRINTS PR00610 Cytochrome F signature 263 283 7.6E-130 T 11-10-2018 IPR002325 Cytochrome f GO:0005506|GO:0009055|GO:0015979|GO:0020037|GO:0031361 syc0319_d 064f91c6ec2c6f2cec4fb1bf2467d96d 324 PRINTS PR00610 Cytochrome F signature 70 90 7.6E-130 T 11-10-2018 IPR002325 Cytochrome f GO:0005506|GO:0009055|GO:0015979|GO:0020037|GO:0031361 syc0319_d 064f91c6ec2c6f2cec4fb1bf2467d96d 324 SUPERFAMILY SSF49441 42 289 5.23E-95 T 11-10-2018 IPR036826 Cytochrome f large domain superfamily syc0319_d 064f91c6ec2c6f2cec4fb1bf2467d96d 324 Pfam PF16639 Apocytochrome F, N-terminal 42 196 4.4E-82 T 11-10-2018 IPR024094 Cytochrome f large domain syc0319_d 064f91c6ec2c6f2cec4fb1bf2467d96d 324 SUPERFAMILY SSF51246 211 270 6.59E-13 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 syc0709_d 9403746cd55a7f931988ae54860bdaa4 218 Gene3D G3DSA:1.10.3210.10 7 173 1.1E-37 T 11-10-2018 syc0709_d 9403746cd55a7f931988ae54860bdaa4 218 SUPERFAMILY SSF109604 6 169 6.28E-33 T 11-10-2018 syc0709_d 9403746cd55a7f931988ae54860bdaa4 218 Pfam PF13328 HD domain 14 158 6.6E-29 T 11-10-2018 IPR003607 HD/PDEase domain syc0709_d 9403746cd55a7f931988ae54860bdaa4 218 SMART SM00471 30 143 0.0059 T 11-10-2018 IPR003607 HD/PDEase domain syc2342_d 40ee50b0ac108d017cf9eb2617ca2d09 130 PRINTS PR00352 3Fe-4S ferredoxin signature 52 62 6.8E-5 T 11-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 syc2342_d 40ee50b0ac108d017cf9eb2617ca2d09 130 PRINTS PR00352 3Fe-4S ferredoxin signature 82 94 6.8E-5 T 11-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 syc2342_d 40ee50b0ac108d017cf9eb2617ca2d09 130 PRINTS PR00352 3Fe-4S ferredoxin signature 41 52 6.8E-5 T 11-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 syc2342_d 40ee50b0ac108d017cf9eb2617ca2d09 130 Pfam PF13370 4Fe-4S single cluster domain of Ferredoxin I 41 96 5.4E-17 T 11-10-2018 syc2342_d 40ee50b0ac108d017cf9eb2617ca2d09 130 SUPERFAMILY SSF54862 38 97 3.79E-12 T 11-10-2018 syc2342_d 40ee50b0ac108d017cf9eb2617ca2d09 130 Gene3D G3DSA:3.30.70.20 36 98 7.3E-23 T 11-10-2018 syc2370_d 2ca53eb93e2d212f9ebae48bb6d1040b 234 SUPERFAMILY SSF48371 7 219 1.02E-40 T 11-10-2018 IPR016024 Armadillo-type fold syc2370_d 2ca53eb93e2d212f9ebae48bb6d1040b 234 Gene3D G3DSA:1.25.10.110 1 80 3.6E-8 T 11-10-2018 syc2370_d 2ca53eb93e2d212f9ebae48bb6d1040b 234 Gene3D G3DSA:1.25.10.10 81 228 1.2E-32 T 11-10-2018 IPR011989 Armadillo-like helical syc2370_d 2ca53eb93e2d212f9ebae48bb6d1040b 234 Pfam PF13646 HEAT repeats 163 220 1.6E-8 T 11-10-2018 syc2370_d 2ca53eb93e2d212f9ebae48bb6d1040b 234 Pfam PF13646 HEAT repeats 38 123 7.7E-16 T 11-10-2018 syc2370_d 2ca53eb93e2d212f9ebae48bb6d1040b 234 SMART SM00567 E-Z type HEAT repeats 49 78 0.0022 T 11-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 syc2370_d 2ca53eb93e2d212f9ebae48bb6d1040b 234 SMART SM00567 E-Z type HEAT repeats 144 173 22.0 T 11-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 syc2370_d 2ca53eb93e2d212f9ebae48bb6d1040b 234 SMART SM00567 E-Z type HEAT repeats 18 47 0.93 T 11-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 syc2370_d 2ca53eb93e2d212f9ebae48bb6d1040b 234 SMART SM00567 E-Z type HEAT repeats 113 142 1.9E-8 T 11-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 syc2370_d 2ca53eb93e2d212f9ebae48bb6d1040b 234 SMART SM00567 E-Z type HEAT repeats 81 110 0.68 T 11-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 syc2370_d 2ca53eb93e2d212f9ebae48bb6d1040b 234 SMART SM00567 E-Z type HEAT repeats 175 204 0.041 T 11-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 syc2453_d fabb957fdac2a05694d539ae02206f41 334 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 22 309 5.0E-69 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme syc2453_d fabb957fdac2a05694d539ae02206f41 334 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 49 67 - T 11-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 syc2453_d fabb957fdac2a05694d539ae02206f41 334 TIGRFAM TIGR01139 cysK: cysteine synthase A 21 322 2.1E-144 T 11-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 syc2453_d fabb957fdac2a05694d539ae02206f41 334 Gene3D G3DSA:3.40.50.1100 61 163 5.6E-128 T 11-10-2018 syc2453_d fabb957fdac2a05694d539ae02206f41 334 Gene3D G3DSA:3.40.50.1100 23 317 5.6E-128 T 11-10-2018 syc2453_d fabb957fdac2a05694d539ae02206f41 334 TIGRFAM TIGR01136 cysKM: cysteine synthase 21 322 8.1E-137 T 11-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 syc2453_d fabb957fdac2a05694d539ae02206f41 334 SUPERFAMILY SSF53686 15 324 6.55E-105 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme syc1335_c a76465bf2521cacffb4845b884e6566c 292 Gene3D G3DSA:3.30.950.10 116 233 5.6E-44 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 syc1335_c a76465bf2521cacffb4845b884e6566c 292 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 9 277 1.7E-94 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 syc1335_c a76465bf2521cacffb4845b884e6566c 292 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 8 227 37.932 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 syc1335_c a76465bf2521cacffb4845b884e6566c 292 PIRSF PIRSF005917 2 280 1.3E-106 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 syc1335_c a76465bf2521cacffb4845b884e6566c 292 Gene3D G3DSA:3.40.1010.10 1 115 2.3E-43 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 syc1335_c a76465bf2521cacffb4845b884e6566c 292 SUPERFAMILY SSF53790 8 225 1.07E-83 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 syc1335_c a76465bf2521cacffb4845b884e6566c 292 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 8 208 2.3E-28 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 syc0253_c b37c204d842e2cbcc03c11488b87bf87 189 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 9 182 8.4E-55 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase syc0253_c b37c204d842e2cbcc03c11488b87bf87 189 SUPERFAMILY SSF100950 8 188 6.91E-50 T 11-10-2018 IPR037171 NagB/RpiA transferase-like syc0253_c b37c204d842e2cbcc03c11488b87bf87 189 PIRSF PIRSF006806 4 185 6.5E-42 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase syc0253_c b37c204d842e2cbcc03c11488b87bf87 189 Gene3D G3DSA:3.40.50.10420 7 188 2.5E-48 T 11-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily syc0253_c b37c204d842e2cbcc03c11488b87bf87 189 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 9 182 1.6E-35 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase syc2330_c 3725504812ed52b071603cc8641b289c 441 PIRSF PIRSF016565 5 432 8.3E-159 T 11-10-2018 IPR026036 PucC protein syc2330_c 3725504812ed52b071603cc8641b289c 441 SUPERFAMILY SSF103473 28 423 1.7E-22 T 11-10-2018 IPR036259 MFS transporter superfamily syc2330_c 3725504812ed52b071603cc8641b289c 441 Pfam PF03209 PUCC protein 44 416 1.3E-103 T 11-10-2018 IPR004896 PucC-related syc2330_c 3725504812ed52b071603cc8641b289c 441 Gene3D G3DSA:1.20.1250.20 20 432 6.5E-16 T 11-10-2018 syc2012_d b18782aeda5f2f7a163b79678fcd96b1 316 SUPERFAMILY SSF53448 3 279 2.81E-52 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases syc2012_d b18782aeda5f2f7a163b79678fcd96b1 316 Pfam PF00535 Glycosyl transferase family 2 5 115 7.6E-31 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 syc2012_d b18782aeda5f2f7a163b79678fcd96b1 316 Gene3D G3DSA:3.90.550.10 2 216 3.2E-51 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases syc1488_c b9c25898b6c5eb92e7688a3ed7fa35fe 400 Hamap MF_00005 Argininosuccinate synthase [argG]. 4 399 53.869 T 11-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 syc1488_c b9c25898b6c5eb92e7688a3ed7fa35fe 400 Gene3D G3DSA:3.90.1260.10 66 355 5.4E-148 T 11-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 syc1488_c b9c25898b6c5eb92e7688a3ed7fa35fe 400 Gene3D G3DSA:1.20.5.470 365 400 4.7E-10 T 11-10-2018 syc1488_c b9c25898b6c5eb92e7688a3ed7fa35fe 400 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 10 18 - T 11-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 syc1488_c b9c25898b6c5eb92e7688a3ed7fa35fe 400 Pfam PF00764 Arginosuccinate synthase 8 394 1.4E-176 T 11-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 syc1488_c b9c25898b6c5eb92e7688a3ed7fa35fe 400 SUPERFAMILY SSF52402 5 173 9.48E-45 T 11-10-2018 syc1488_c b9c25898b6c5eb92e7688a3ed7fa35fe 400 TIGRFAM TIGR00032 argG: argininosuccinate synthase 6 397 7.5E-169 T 11-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 syc1488_c b9c25898b6c5eb92e7688a3ed7fa35fe 400 SUPERFAMILY SSF69864 174 398 8.89E-93 T 11-10-2018 syc1488_c b9c25898b6c5eb92e7688a3ed7fa35fe 400 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 119 130 - T 11-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 syc1488_c b9c25898b6c5eb92e7688a3ed7fa35fe 400 Gene3D G3DSA:3.40.50.620 7 174 5.4E-148 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold syc0146_c 53e411ca426f8542ffdb5c7e873880c8 340 Gene3D G3DSA:3.40.190.10 130 338 6.5E-127 T 11-10-2018 syc0146_c 53e411ca426f8542ffdb5c7e873880c8 340 PIRSF PIRSF002825 10 340 1.0E-82 T 11-10-2018 IPR026045 Ferric binding protein syc0146_c 53e411ca426f8542ffdb5c7e873880c8 340 Pfam PF13343 Bacterial extracellular solute-binding protein 77 304 3.3E-25 T 11-10-2018 syc0146_c 53e411ca426f8542ffdb5c7e873880c8 340 SUPERFAMILY SSF53850 31 336 1.94E-82 T 11-10-2018 syc0146_c 53e411ca426f8542ffdb5c7e873880c8 340 Gene3D G3DSA:3.40.190.10 32 303 6.5E-127 T 11-10-2018 syc1637_d 9576ddbb4c32c8609f5ccad4a01e69ae 288 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 10 285 2.9E-63 T 11-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 syc1637_d 9576ddbb4c32c8609f5ccad4a01e69ae 288 Gene3D G3DSA:3.40.50.720 107 250 4.7E-88 T 11-10-2018 syc1637_d 9576ddbb4c32c8609f5ccad4a01e69ae 288 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 8 283 32.485 T 11-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 syc1637_d 9576ddbb4c32c8609f5ccad4a01e69ae 288 SUPERFAMILY SSF53223 4 107 1.38E-32 T 11-10-2018 syc1637_d 9576ddbb4c32c8609f5ccad4a01e69ae 288 SUPERFAMILY SSF51735 108 282 7.69E-39 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily syc1637_d 9576ddbb4c32c8609f5ccad4a01e69ae 288 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 13 95 1.9E-26 T 11-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 syc1637_d 9576ddbb4c32c8609f5ccad4a01e69ae 288 Gene3D G3DSA:3.40.50.10860 12 270 4.7E-88 T 11-10-2018 syc0593_d 86a35d3974a61462c6bf88592da320eb 292 SUPERFAMILY SSF161098 48 272 1.3E-62 T 11-10-2018 IPR035906 MetI-like superfamily syc0593_d 86a35d3974a61462c6bf88592da320eb 292 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 79 272 1.2E-19 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 syc0593_d 86a35d3974a61462c6bf88592da320eb 292 Gene3D G3DSA:1.10.3720.10 44 284 1.1E-70 T 11-10-2018 IPR035906 MetI-like superfamily syc0478_d d2d6802159ee722c96beb8ba27c14809 166 SUPERFAMILY SSF103256 2 139 3.4E-46 T 11-10-2018 IPR036104 Bifunctional nuclease superfamily GO:0004518 syc0478_d d2d6802159ee722c96beb8ba27c14809 166 Gene3D G3DSA:3.10.690.10 1 142 4.3E-49 T 11-10-2018 IPR036104 Bifunctional nuclease superfamily GO:0004518 syc0478_d d2d6802159ee722c96beb8ba27c14809 166 Pfam PF02577 Bifunctional nuclease 5 132 1.4E-48 T 11-10-2018 IPR003729 Bifunctional nuclease domain GO:0004518 syc1756_d 0ea9f69e50ecde6579e5d2af925c014c 374 SUPERFAMILY SSF51182 87 362 1.48E-57 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily syc1756_d 0ea9f69e50ecde6579e5d2af925c014c 374 Gene3D G3DSA:2.60.120.10 75 210 2.5E-20 T 11-10-2018 IPR014710 RmlC-like jelly roll fold syc1756_d 0ea9f69e50ecde6579e5d2af925c014c 374 Gene3D G3DSA:2.60.120.10 211 373 2.4E-39 T 11-10-2018 IPR014710 RmlC-like jelly roll fold syc2302_d 7d193d21ee181e2dcb1ab0c636b4e018 411 SUPERFAMILY SSF50952 56 404 1.44E-48 T 11-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 syc2302_d 7d193d21ee181e2dcb1ab0c636b4e018 411 Gene3D G3DSA:2.120.10.30 51 405 3.9E-114 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like syc2302_d 7d193d21ee181e2dcb1ab0c636b4e018 411 Pfam PF07995 Glucose / Sorbosone dehydrogenase 65 401 6.6E-126 T 11-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase syc0931_d f1b795a641f76bb54f803fef5dd43216 360 ProSitePatterns PS00433 Phosphofructokinase signature. 263 281 - T 11-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 syc0931_d f1b795a641f76bb54f803fef5dd43216 360 Gene3D G3DSA:3.40.50.450 6 319 1.6E-92 T 11-10-2018 syc0931_d f1b795a641f76bb54f803fef5dd43216 360 Gene3D G3DSA:3.40.50.460 147 275 1.6E-92 T 11-10-2018 syc0931_d f1b795a641f76bb54f803fef5dd43216 360 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 34 47 1.9E-65 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 syc0931_d f1b795a641f76bb54f803fef5dd43216 360 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 145 163 1.9E-65 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 syc0931_d f1b795a641f76bb54f803fef5dd43216 360 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 220 232 1.9E-65 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 syc0931_d f1b795a641f76bb54f803fef5dd43216 360 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 259 281 1.9E-65 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 syc0931_d f1b795a641f76bb54f803fef5dd43216 360 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 183 200 1.9E-65 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 syc0931_d f1b795a641f76bb54f803fef5dd43216 360 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 8 27 1.9E-65 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 syc0931_d f1b795a641f76bb54f803fef5dd43216 360 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 99 115 1.9E-65 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 syc0931_d f1b795a641f76bb54f803fef5dd43216 360 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 165 181 1.9E-65 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 syc0931_d f1b795a641f76bb54f803fef5dd43216 360 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 127 144 1.9E-65 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 syc0931_d f1b795a641f76bb54f803fef5dd43216 360 SUPERFAMILY SSF53784 4 336 2.22E-92 T 11-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 syc0931_d f1b795a641f76bb54f803fef5dd43216 360 PIRSF PIRSF000532 2 346 2.3E-107 T 11-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 syc0931_d f1b795a641f76bb54f803fef5dd43216 360 Pfam PF00365 Phosphofructokinase 5 294 2.3E-88 T 11-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 syc0323_d aca3b6f5fe0ad4ee976f9ccbe9fea499 244 SMART SM00278 78 97 0.0071 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 syc0323_d aca3b6f5fe0ad4ee976f9ccbe9fea499 244 Pfam PF04002 RadC-like JAB domain 115 232 7.5E-36 T 11-10-2018 IPR025657 RadC-like JAB domain syc0323_d aca3b6f5fe0ad4ee976f9ccbe9fea499 244 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 185 190 - T 11-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site syc0323_d aca3b6f5fe0ad4ee976f9ccbe9fea499 244 Gene3D G3DSA:3.40.140.10 113 235 4.0E-34 T 11-10-2018 syc0323_d aca3b6f5fe0ad4ee976f9ccbe9fea499 244 TIGRFAM TIGR00608 radc: DNA repair protein RadC 16 234 2.1E-74 T 11-10-2018 IPR001405 Uncharacterised protein family UPF0758 syc0323_d aca3b6f5fe0ad4ee976f9ccbe9fea499 244 SUPERFAMILY SSF47781 59 96 3.78E-5 T 11-10-2018 IPR010994 RuvA domain 2-like syc0323_d aca3b6f5fe0ad4ee976f9ccbe9fea499 244 Pfam PF00633 Helix-hairpin-helix motif 75 96 1.8E-5 T 11-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 syc0995_c 57d9dd8487908cf454da3a3e5f195023 298 SUPERFAMILY SSF161098 58 287 3.53E-61 T 11-10-2018 IPR035906 MetI-like superfamily syc0995_c 57d9dd8487908cf454da3a3e5f195023 298 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 72 286 4.1E-11 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 syc0995_c 57d9dd8487908cf454da3a3e5f195023 298 Gene3D G3DSA:1.10.3720.10 54 293 5.4E-67 T 11-10-2018 IPR035906 MetI-like superfamily syc1680_d a452d236b7ce8a2d903c5b82a5969e77 37 SUPERFAMILY SSF103441 2 31 7.72E-5 T 11-10-2018 syc1680_d a452d236b7ce8a2d903c5b82a5969e77 37 Pfam PF08041 PetM family of cytochrome b6f complex subunit 7 3 31 2.5E-14 T 11-10-2018 IPR012595 PetM of cytochrome b6/f complex subunit 7 GO:0009512 syc1680_d a452d236b7ce8a2d903c5b82a5969e77 37 Hamap MF_00396 Cytochrome b6-f complex subunit 7 [petM]. 1 32 12.88 T 11-10-2018 IPR012595 PetM of cytochrome b6/f complex subunit 7 GO:0009512 syc1058_d 813a2d2f3bc026a356bbab99c64a3d37 157 Pfam PF00583 Acetyltransferase (GNAT) family 10 114 3.3E-16 T 11-10-2018 IPR000182 GNAT domain syc1058_d 813a2d2f3bc026a356bbab99c64a3d37 157 Gene3D G3DSA:3.40.630.30 4 155 1.4E-42 T 11-10-2018 syc1058_d 813a2d2f3bc026a356bbab99c64a3d37 157 SUPERFAMILY SSF55729 11 148 2.03E-29 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase syc2147_d c8582b6097324d9166bdcb3f627a832f 483 SUPERFAMILY SSF82171 219 453 6.87E-14 T 11-10-2018 syc2147_d c8582b6097324d9166bdcb3f627a832f 483 Pfam PF13205 Bacterial Ig-like domain 30 108 2.0E-6 T 11-10-2018 IPR032812 SbsA, Ig-like domain syc2147_d c8582b6097324d9166bdcb3f627a832f 483 SUPERFAMILY SSF82171 38 263 8.63E-7 T 11-10-2018 syc2147_d c8582b6097324d9166bdcb3f627a832f 483 Gene3D G3DSA:2.120.10.30 214 460 8.3E-7 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like syc1324_d 5597c21fe8ca26ad97260ff17e91b565 347 Pfam PF01595 Domain of unknown function DUF21 7 179 3.2E-42 T 11-10-2018 IPR002550 CNNM, transmembrane domain syc1324_d 5597c21fe8ca26ad97260ff17e91b565 347 SUPERFAMILY SSF54631 181 317 2.56E-25 T 11-10-2018 syc1324_d 5597c21fe8ca26ad97260ff17e91b565 347 Gene3D G3DSA:3.10.580.10 175 328 2.2E-43 T 11-10-2018 syc1324_d 5597c21fe8ca26ad97260ff17e91b565 347 Pfam PF00571 CBS domain 265 313 9.4E-5 T 11-10-2018 IPR000644 CBS domain syc0633_c 91d33ffe996466124cdce3a8a8b0b4a8 118 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 99 116 - T 11-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 syc0633_c 91d33ffe996466124cdce3a8a8b0b4a8 118 Pfam PF01521 Iron-sulphur cluster biosynthesis 12 113 1.1E-21 T 11-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 syc0633_c 91d33ffe996466124cdce3a8a8b0b4a8 118 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 13 117 2.5E-35 T 11-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 syc0633_c 91d33ffe996466124cdce3a8a8b0b4a8 118 Gene3D G3DSA:2.60.300.12 12 118 4.7E-36 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 syc0633_c 91d33ffe996466124cdce3a8a8b0b4a8 118 SUPERFAMILY SSF89360 12 106 4.71E-30 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 syc0847_c 192e9e7dd0024ddf31664b088ddb04f1 319 Gene3D G3DSA:3.40.50.2000 1 144 4.3E-25 T 11-10-2018 syc0847_c 192e9e7dd0024ddf31664b088ddb04f1 319 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 71 296 1.7E-22 T 11-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 syc0847_c 192e9e7dd0024ddf31664b088ddb04f1 319 Gene3D G3DSA:3.40.50.2000 163 317 1.7E-21 T 11-10-2018 syc0847_c 192e9e7dd0024ddf31664b088ddb04f1 319 SUPERFAMILY SSF53756 1 316 6.75E-68 T 11-10-2018 syc1504_d 61a3eba65666a99a52b4f756c685272e 607 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 124 176 6.2E-10 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 syc1504_d 61a3eba65666a99a52b4f756c685272e 607 PRINTS PR01047 Threonyl-tRNA synthetase signature 327 350 3.7E-52 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 syc1504_d 61a3eba65666a99a52b4f756c685272e 607 PRINTS PR01047 Threonyl-tRNA synthetase signature 294 322 3.7E-52 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 syc1504_d 61a3eba65666a99a52b4f756c685272e 607 PRINTS PR01047 Threonyl-tRNA synthetase signature 432 460 3.7E-52 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 syc1504_d 61a3eba65666a99a52b4f756c685272e 607 PRINTS PR01047 Threonyl-tRNA synthetase signature 475 488 3.7E-52 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 syc1504_d 61a3eba65666a99a52b4f756c685272e 607 PRINTS PR01047 Threonyl-tRNA synthetase signature 502 514 3.7E-52 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 syc1504_d 61a3eba65666a99a52b4f756c685272e 607 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 289 497 1.2E-38 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 syc1504_d 61a3eba65666a99a52b4f756c685272e 607 SUPERFAMILY SSF55186 24 198 1.7E-55 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 syc1504_d 61a3eba65666a99a52b4f756c685272e 607 Pfam PF03129 Anticodon binding domain 509 597 1.8E-19 T 11-10-2018 IPR004154 Anticodon-binding syc1504_d 61a3eba65666a99a52b4f756c685272e 607 Gene3D G3DSA:3.30.980.10 26 179 9.4E-58 T 11-10-2018 syc1504_d 61a3eba65666a99a52b4f756c685272e 607 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 29 598 2.7E-228 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 syc1504_d 61a3eba65666a99a52b4f756c685272e 607 Gene3D G3DSA:3.30.930.10 180 499 2.0E-118 T 11-10-2018 syc1504_d 61a3eba65666a99a52b4f756c685272e 607 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 23 602 33.649 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 syc1504_d 61a3eba65666a99a52b4f756c685272e 607 SUPERFAMILY SSF52954 497 602 7.1E-28 T 11-10-2018 syc1504_d 61a3eba65666a99a52b4f756c685272e 607 Gene3D G3DSA:3.40.50.800 500 605 3.4E-28 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily syc1504_d 61a3eba65666a99a52b4f756c685272e 607 SUPERFAMILY SSF55681 200 494 1.91E-92 T 11-10-2018 syc1504_d 61a3eba65666a99a52b4f756c685272e 607 Gene3D G3DSA:3.30.54.20 87 142 9.4E-58 T 11-10-2018 syc1504_d 61a3eba65666a99a52b4f756c685272e 607 SMART SM00863 124 176 7.5E-18 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 syc1699_c 8effbaac08de0eaae9605449b78e351b 379 TIGRFAM TIGR02352 thiamin_ThiO: glycine oxidase ThiO 5 341 4.1E-96 T 11-10-2018 IPR012727 Glycine oxidase ThiO GO:0016491|GO:0050660 KEGG: 00730+1.4.3.19|MetaCyc: PWY-7396|MetaCyc: PWY-7806 syc1699_c 8effbaac08de0eaae9605449b78e351b 379 SUPERFAMILY SSF54373 212 300 9.81E-21 T 11-10-2018 syc1699_c 8effbaac08de0eaae9605449b78e351b 379 Pfam PF01266 FAD dependent oxidoreductase 5 337 4.4E-56 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 syc1699_c 8effbaac08de0eaae9605449b78e351b 379 Gene3D G3DSA:3.30.9.10 89 299 5.0E-82 T 11-10-2018 syc1699_c 8effbaac08de0eaae9605449b78e351b 379 Gene3D G3DSA:3.50.50.60 6 339 5.0E-82 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc1699_c 8effbaac08de0eaae9605449b78e351b 379 SUPERFAMILY SSF51905 4 358 3.5E-35 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc0947_c 40172f50dafcb9ac656be2187eb6dc19 301 SUPERFAMILY SSF110399 35 280 4.45E-85 T 11-10-2018 syc0947_c 40172f50dafcb9ac656be2187eb6dc19 301 Gene3D G3DSA:3.20.20.70 27 295 4.5E-118 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 syc0947_c 40172f50dafcb9ac656be2187eb6dc19 301 Hamap MF_00443 Thiazole synthase [thiG]. 36 295 44.631 T 11-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 syc0947_c 40172f50dafcb9ac656be2187eb6dc19 301 Pfam PF05690 Thiazole biosynthesis protein ThiG 39 289 5.4E-111 T 11-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 syc0766_c ad8abe019beffb5ffb76c2012329ee32 504 Gene3D G3DSA:3.90.780.10 332 503 6.0E-27 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 syc0766_c ad8abe019beffb5ffb76c2012329ee32 504 Pfam PF00149 Calcineurin-like phosphoesterase 39 251 3.0E-7 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 syc0766_c ad8abe019beffb5ffb76c2012329ee32 504 SUPERFAMILY SSF55816 332 502 2.22E-30 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 syc0766_c ad8abe019beffb5ffb76c2012329ee32 504 Gene3D G3DSA:3.60.21.10 35 319 2.1E-44 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like syc0766_c ad8abe019beffb5ffb76c2012329ee32 504 PRINTS PR01607 Apyrase family signature 234 257 2.4E-15 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 syc0766_c ad8abe019beffb5ffb76c2012329ee32 504 PRINTS PR01607 Apyrase family signature 450 469 2.4E-15 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 syc0766_c ad8abe019beffb5ffb76c2012329ee32 504 PRINTS PR01607 Apyrase family signature 215 232 2.4E-15 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 syc0766_c ad8abe019beffb5ffb76c2012329ee32 504 PRINTS PR01607 Apyrase family signature 389 412 2.4E-15 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 syc0766_c ad8abe019beffb5ffb76c2012329ee32 504 SUPERFAMILY SSF56300 37 317 3.54E-54 T 11-10-2018 syc0766_c ad8abe019beffb5ffb76c2012329ee32 504 Pfam PF02872 5'-nucleotidase, C-terminal domain 333 470 3.9E-21 T 11-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 syc1753_d c5f3304afd1270540030d1fdbc67cbd7 233 Gene3D G3DSA:3.90.870.10 1 222 4.6E-57 T 11-10-2018 syc1753_d c5f3304afd1270540030d1fdbc67cbd7 233 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 226 1.3E-57 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 syc1753_d c5f3304afd1270540030d1fdbc67cbd7 233 Pfam PF01300 Telomere recombination 22 218 9.0E-38 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 syc1753_d c5f3304afd1270540030d1fdbc67cbd7 233 SUPERFAMILY SSF55821 1 222 2.38E-52 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily syc0588_d 721d2b43b6a758c734c898df5015cf82 344 Pfam PF01571 Aminomethyltransferase folate-binding domain 21 232 6.0E-22 T 11-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain syc0588_d 721d2b43b6a758c734c898df5015cf82 344 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 203 266 2.4E-23 T 11-10-2018 IPR017703 YgfZ/GcvT conserved site syc0588_d 721d2b43b6a758c734c898df5015cf82 344 Gene3D G3DSA:3.30.1360.120 6 330 1.7E-60 T 11-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 syc0588_d 721d2b43b6a758c734c898df5015cf82 344 PIRSF PIRSF006487 8 335 1.2E-18 T 11-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 syc0588_d 721d2b43b6a758c734c898df5015cf82 344 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 241 321 2.8E-10 T 11-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 syc0588_d 721d2b43b6a758c734c898df5015cf82 344 SUPERFAMILY SSF103025 20 255 3.45E-51 T 11-10-2018 syc1199_d a83450136567788686d7b3ee73b50fc3 209 Gene3D G3DSA:1.20.1300.10 2 208 3.5E-29 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 syc1199_d a83450136567788686d7b3ee73b50fc3 209 SUPERFAMILY SSF81343 4 203 2.62E-26 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 syc1681_d 03268959a9ffee8b12f673a584016f94 320 Pfam PF13460 NAD(P)H-binding 7 193 5.8E-32 T 11-10-2018 IPR016040 NAD(P)-binding domain syc1681_d 03268959a9ffee8b12f673a584016f94 320 SUPERFAMILY SSF51735 3 307 9.48E-66 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily syc1681_d 03268959a9ffee8b12f673a584016f94 320 Gene3D G3DSA:3.40.50.720 2 285 1.1E-54 T 11-10-2018 syc1258_d 6432b0777e2f6226a404f62f29f199b3 446 Gene3D G3DSA:3.40.50.300 201 387 7.1E-11 T 11-10-2018 syc1258_d 6432b0777e2f6226a404f62f29f199b3 446 Pfam PF05673 Protein of unknown function (DUF815) 194 439 5.5E-98 T 11-10-2018 IPR008533 Domain of unknown function DUF815 syc1258_d 6432b0777e2f6226a404f62f29f199b3 446 SUPERFAMILY SSF52540 203 348 2.12E-27 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0056_d 535449703609fa87fa6dc2697bef082d 361 TIGRFAM TIGR02669 SpoIID_LytB: SpoIID/LytB domain 216 315 6.6E-39 T 11-10-2018 IPR013486 Sporulation stage II protein D, amidase enhancer LytB GO:0030435 syc0056_d 535449703609fa87fa6dc2697bef082d 361 ProDom PD191273 TC0311 EXPORTED CT041 CPN0389/CP0366/CPJ0389/CPB0400 126 357 3.0E-4 T 11-10-2018 syc0056_d 535449703609fa87fa6dc2697bef082d 361 Pfam PF08486 Stage II sporulation protein 212 301 6.8E-27 T 11-10-2018 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal syc1476_d d2f11b9c5bf1858e609c64c54d344c5f 246 Pfam PF02571 Precorrin-6x reductase CbiJ/CobK 3 242 1.1E-74 T 11-10-2018 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 syc1476_d d2f11b9c5bf1858e609c64c54d344c5f 246 TIGRFAM TIGR00715 precor6x_red: precorrin-6x reductase 3 234 3.1E-48 T 11-10-2018 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 syc0909_c e9bdac9b27e0788c99144740903e0440 114 Pfam PF00581 Rhodanese-like domain 18 105 2.0E-10 T 11-10-2018 IPR001763 Rhodanese-like domain syc0909_c e9bdac9b27e0788c99144740903e0440 114 Gene3D G3DSA:3.40.250.10 10 112 3.2E-21 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily syc0909_c e9bdac9b27e0788c99144740903e0440 114 SUPERFAMILY SSF52821 3 112 2.23E-25 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily syc0909_c e9bdac9b27e0788c99144740903e0440 114 SMART SM00450 10 109 6.9E-19 T 11-10-2018 IPR001763 Rhodanese-like domain syc0739_d e4d53e569d5804582ad8a44524e599b9 618 Pfam PF04055 Radical SAM superfamily 242 389 2.4E-17 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 syc0739_d e4d53e569d5804582ad8a44524e599b9 618 SUPERFAMILY SSF102114 217 474 7.98E-30 T 11-10-2018 syc0739_d e4d53e569d5804582ad8a44524e599b9 618 Gene3D G3DSA:3.80.30.20 235 419 1.9E-22 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe syc0739_d e4d53e569d5804582ad8a44524e599b9 618 SMART SM00729 235 456 6.0E-21 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 syc2389_c b419696d73276e4d845429a55a95fde7 178 TIGRFAM TIGR04376 TIGR04376: TIGR04376 family protein 2 176 4.0E-70 T 11-10-2018 IPR030816 Conserved hypothetical protein CHP04376 syc2477_d c1c0ac7b70bb9ace3cb853033f2dbf4e 278 SMART SM00382 49 231 6.8E-18 T 11-10-2018 IPR003593 AAA+ ATPase domain syc2477_d c1c0ac7b70bb9ace3cb853033f2dbf4e 278 Gene3D G3DSA:3.40.50.300 19 257 2.7E-65 T 11-10-2018 syc2477_d c1c0ac7b70bb9ace3cb853033f2dbf4e 278 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 syc2477_d c1c0ac7b70bb9ace3cb853033f2dbf4e 278 Pfam PF00005 ABC transporter 40 181 1.3E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 syc2477_d c1c0ac7b70bb9ace3cb853033f2dbf4e 278 TIGRFAM TIGR01184 ntrCD: nitrate ABC transporter, ATP-binding proteins C and D 40 269 5.6E-131 T 11-10-2018 IPR005890 Nitrate transport ATP-binding subunit C/D GO:0015112|GO:0015706|GO:0016020 syc2477_d c1c0ac7b70bb9ace3cb853033f2dbf4e 278 SUPERFAMILY SSF52540 21 241 4.08E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc1996_d 38fbbafb050c72d50ad81059cbe00860 308 Pfam PF08907 Domain of unknown function (DUF1853) 17 299 6.9E-62 T 11-10-2018 IPR015003 Protein of unknown function DUF1853 syc0360_d 4b823d13a84f6302a856b77042e41da8 486 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 486 33.773 T 11-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 syc0360_d 4b823d13a84f6302a856b77042e41da8 486 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 175 481 1.0E-117 T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 syc0360_d 4b823d13a84f6302a856b77042e41da8 486 PRINTS PR00481 Cytosol aminopeptidase signature 251 268 2.1E-56 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 syc0360_d 4b823d13a84f6302a856b77042e41da8 486 PRINTS PR00481 Cytosol aminopeptidase signature 333 353 2.1E-56 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 syc0360_d 4b823d13a84f6302a856b77042e41da8 486 PRINTS PR00481 Cytosol aminopeptidase signature 361 376 2.1E-56 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 syc0360_d 4b823d13a84f6302a856b77042e41da8 486 PRINTS PR00481 Cytosol aminopeptidase signature 274 295 2.1E-56 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 syc0360_d 4b823d13a84f6302a856b77042e41da8 486 PRINTS PR00481 Cytosol aminopeptidase signature 311 332 2.1E-56 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 syc0360_d 4b823d13a84f6302a856b77042e41da8 486 SUPERFAMILY SSF53187 170 485 1.91E-111 T 11-10-2018 syc0360_d 4b823d13a84f6302a856b77042e41da8 486 SUPERFAMILY SSF52949 1 173 3.53E-30 T 11-10-2018 syc0360_d 4b823d13a84f6302a856b77042e41da8 486 Gene3D G3DSA:3.40.630.10 177 486 1.6E-123 T 11-10-2018 syc0360_d 4b823d13a84f6302a856b77042e41da8 486 Gene3D G3DSA:3.40.220.10 1 176 1.5E-36 T 11-10-2018 syc0360_d 4b823d13a84f6302a856b77042e41da8 486 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 29 141 6.9E-27 T 11-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 syc0360_d 4b823d13a84f6302a856b77042e41da8 486 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 337 344 - T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 syc0786_c 43b7e0949c5b3d2f3e848444e8682ca7 387 Gene3D G3DSA:3.90.1340.10 235 313 9.9E-14 T 11-10-2018 IPR037053 Phage tail collar domain superfamily syc0786_c 43b7e0949c5b3d2f3e848444e8682ca7 387 SUPERFAMILY SSF88874 235 386 1.03E-33 T 11-10-2018 syc0992_c da5854993d2736883c82d27ca73388e0 262 SUPERFAMILY SSF100950 30 262 3.11E-68 T 11-10-2018 IPR037171 NagB/RpiA transferase-like syc0992_c da5854993d2736883c82d27ca73388e0 262 Gene3D G3DSA:3.40.50.1360 13 262 8.7E-80 T 11-10-2018 syc0992_c da5854993d2736883c82d27ca73388e0 262 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 35 252 2.8E-73 T 11-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 syc0992_c da5854993d2736883c82d27ca73388e0 262 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 34 259 1.1E-77 T 11-10-2018 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 syc2269_c e859410d866082d027802204184f949c 172 PIRSF PIRSF000847 1 171 2.7E-42 T 11-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 syc2269_c e859410d866082d027802204184f949c 172 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 50 72 - T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 syc2269_c e859410d866082d027802204184f949c 172 Pfam PF01066 CDP-alcohol phosphatidyltransferase 6 72 2.7E-16 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 syc2269_c e859410d866082d027802204184f949c 172 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 5 168 2.7E-48 T 11-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 syc2269_c e859410d866082d027802204184f949c 172 Gene3D G3DSA:1.20.120.1760 2 166 2.4E-9 T 11-10-2018 syc0975_c 088ffdff2cd065efe172afc7023638ac 715 Gene3D G3DSA:1.20.1530.20 7 413 3.6E-101 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily syc0975_c 088ffdff2cd065efe172afc7023638ac 715 SUPERFAMILY SSF52402 430 563 2.34E-9 T 11-10-2018 syc0975_c 088ffdff2cd065efe172afc7023638ac 715 Gene3D G3DSA:3.40.50.12370 429 695 6.2E-12 T 11-10-2018 syc0975_c 088ffdff2cd065efe172afc7023638ac 715 Pfam PF00582 Universal stress protein family 430 563 4.5E-9 T 11-10-2018 IPR006016 UspA syc0975_c 088ffdff2cd065efe172afc7023638ac 715 SUPERFAMILY SSF52402 573 695 3.52E-7 T 11-10-2018 syc0975_c 088ffdff2cd065efe172afc7023638ac 715 Pfam PF00999 Sodium/hydrogen exchanger family 14 405 1.1E-60 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 syc2224_d 8e16aa966a4be135b8587f1fda570ea3 427 Gene3D G3DSA:2.40.30.170 60 334 1.5E-65 T 11-10-2018 syc2224_d 8e16aa966a4be135b8587f1fda570ea3 427 Pfam PF13533 Biotin-lipoyl like 72 118 4.2E-6 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain syc2224_d 8e16aa966a4be135b8587f1fda570ea3 427 SUPERFAMILY SSF111369 61 147 3.01E-9 T 11-10-2018 syc2224_d 8e16aa966a4be135b8587f1fda570ea3 427 SUPERFAMILY SSF111369 138 333 6.15E-14 T 11-10-2018 syc2224_d 8e16aa966a4be135b8587f1fda570ea3 427 Gene3D G3DSA:2.40.50.100 71 258 1.5E-65 T 11-10-2018 syc2224_d 8e16aa966a4be135b8587f1fda570ea3 427 Gene3D G3DSA:1.10.287.470 105 224 1.5E-65 T 11-10-2018 syc2224_d 8e16aa966a4be135b8587f1fda570ea3 427 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 168 328 1.0E-24 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain syc2224_d 8e16aa966a4be135b8587f1fda570ea3 427 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 188 416 5.6E-46 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 syc2224_d 8e16aa966a4be135b8587f1fda570ea3 427 Gene3D G3DSA:2.40.420.20 57 402 1.5E-65 T 11-10-2018 syc1316_c 70cb893a6645ef161666ac41d143491a 142 Gene3D G3DSA:2.160.20.100 89 139 1.7E-12 T 11-10-2018 syc1316_c 70cb893a6645ef161666ac41d143491a 142 Pfam PF00805 Pentapeptide repeats (8 copies) 40 79 4.5E-16 T 11-10-2018 IPR001646 Pentapeptide repeat syc1316_c 70cb893a6645ef161666ac41d143491a 142 Pfam PF00805 Pentapeptide repeats (8 copies) 80 119 1.8E-11 T 11-10-2018 IPR001646 Pentapeptide repeat syc1316_c 70cb893a6645ef161666ac41d143491a 142 Gene3D G3DSA:2.160.20.100 30 88 4.7E-18 T 11-10-2018 syc1316_c 70cb893a6645ef161666ac41d143491a 142 SUPERFAMILY SSF141571 38 135 3.66E-31 T 11-10-2018 syc0035_c a7fb27715869bccfe09f4e0d58a6f5bb 279 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 32 270 14.624 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 syc0035_c a7fb27715869bccfe09f4e0d58a6f5bb 279 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 43 256 5.7E-77 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 syc0035_c a7fb27715869bccfe09f4e0d58a6f5bb 279 ProSitePatterns PS01218 TatC family signature. 183 202 - T 11-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site syc0035_c a7fb27715869bccfe09f4e0d58a6f5bb 279 Pfam PF00902 Sec-independent protein translocase protein (TatC) 45 249 1.9E-59 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 syc0035_c a7fb27715869bccfe09f4e0d58a6f5bb 279 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 114 132 3.7E-43 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 syc0035_c a7fb27715869bccfe09f4e0d58a6f5bb 279 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 132 158 3.7E-43 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 syc0035_c a7fb27715869bccfe09f4e0d58a6f5bb 279 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 183 211 3.7E-43 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 syc0035_c a7fb27715869bccfe09f4e0d58a6f5bb 279 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 42 69 3.7E-43 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 syc2063_c 26628e39614de09646a0976b78d8c884 403 PRINTS PR01035 Tetracycline resistance protein signature 286 307 1.2E-31 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 syc2063_c 26628e39614de09646a0976b78d8c884 403 PRINTS PR01035 Tetracycline resistance protein signature 24 40 1.2E-31 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 syc2063_c 26628e39614de09646a0976b78d8c884 403 PRINTS PR01035 Tetracycline resistance protein signature 348 371 1.2E-31 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 syc2063_c 26628e39614de09646a0976b78d8c884 403 PRINTS PR01035 Tetracycline resistance protein signature 142 164 1.2E-31 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 syc2063_c 26628e39614de09646a0976b78d8c884 403 PRINTS PR01035 Tetracycline resistance protein signature 170 190 1.2E-31 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 syc2063_c 26628e39614de09646a0976b78d8c884 403 PRINTS PR01035 Tetracycline resistance protein signature 258 278 1.2E-31 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 syc2063_c 26628e39614de09646a0976b78d8c884 403 Pfam PF07690 Major Facilitator Superfamily 19 310 1.8E-40 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 syc2063_c 26628e39614de09646a0976b78d8c884 403 Gene3D G3DSA:1.20.1250.20 7 396 1.4E-72 T 11-10-2018 syc2063_c 26628e39614de09646a0976b78d8c884 403 SUPERFAMILY SSF103473 11 399 1.06E-68 T 11-10-2018 IPR036259 MFS transporter superfamily syc1239_c 2030c12328cd3e8477cbee8b57a9147b 112 SUPERFAMILY SSF81301 8 111 1.01E-20 T 11-10-2018 syc1239_c 2030c12328cd3e8477cbee8b57a9147b 112 Gene3D G3DSA:3.30.460.10 9 106 5.2E-21 T 11-10-2018 syc1239_c 2030c12328cd3e8477cbee8b57a9147b 112 Pfam PF01909 Nucleotidyltransferase domain 21 96 6.3E-13 T 11-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 syc2034_d 7235de6f2cdab67fc8efbdaef4cab40b 213 Gene3D G3DSA:3.30.110.150 95 177 7.0E-27 T 11-10-2018 IPR038594 SepF-like superfamily syc2034_d 7235de6f2cdab67fc8efbdaef4cab40b 213 Pfam PF04472 Cell division protein SepF 100 171 9.1E-26 T 11-10-2018 IPR007561 Cell division protein SepF/SepF-related GO:0090529 syc2034_d 7235de6f2cdab67fc8efbdaef4cab40b 213 Hamap MF_01197 Cell division protein SepF [sepF]. 23 179 18.338 T 11-10-2018 IPR023052 Cell division protein SepF GO:0090529 syc1728_c c0bc03caf6f3250d5db7e8ef8596662f 284 Pfam PF08478 POTRA domain, FtsQ-type 62 127 3.2E-9 T 11-10-2018 IPR013685 POTRA domain, FtsQ-type syc0604_c 826521684de433d99220e5ebcecc2a57 108 SMART SM00418 13 91 6.8E-14 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 syc0604_c 826521684de433d99220e5ebcecc2a57 108 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 15 30 1.9E-9 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 syc0604_c 826521684de433d99220e5ebcecc2a57 108 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 62 77 1.9E-9 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 syc0604_c 826521684de433d99220e5ebcecc2a57 108 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 47 62 1.9E-9 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 syc0604_c 826521684de433d99220e5ebcecc2a57 108 Pfam PF01022 Bacterial regulatory protein, arsR family 21 65 2.4E-12 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 syc0604_c 826521684de433d99220e5ebcecc2a57 108 Gene3D G3DSA:1.10.10.10 1 106 1.0E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily syc0604_c 826521684de433d99220e5ebcecc2a57 108 SUPERFAMILY SSF46785 4 104 9.3E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily syc0686_c a9273069b9f1d283af1f89904ac7dbab 798 Gene3D G3DSA:1.50.10.10 451 683 3.0E-13 T 11-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 syc0686_c a9273069b9f1d283af1f89904ac7dbab 798 PIRSF PIRSF028944 1 793 0.0 T 11-10-2018 IPR014551 Beta-glucosidase GBA2-type GO:0004348|GO:0006680|GO:0016020 KEGG: 00511+3.2.1.45|KEGG: 00600+3.2.1.45|Reactome: R-HSA-1660662 syc0686_c a9273069b9f1d283af1f89904ac7dbab 798 Pfam PF12215 beta-glucosidase 2, glycosyl-hydrolase family 116 N-term 37 364 2.7E-93 T 11-10-2018 IPR024462 Glycosyl-hydrolase family 116, N-terminal KEGG: 00511+3.2.1.45|KEGG: 00600+3.2.1.45|Reactome: R-HSA-1660662 syc0686_c a9273069b9f1d283af1f89904ac7dbab 798 SUPERFAMILY SSF48208 354 781 9.72E-42 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 syc0686_c a9273069b9f1d283af1f89904ac7dbab 798 Pfam PF04685 Glycosyl-hydrolase family 116, catalytic region 413 783 4.1E-124 T 11-10-2018 IPR006775 Glycosyl-hydrolase family 116, catalytic region GO:0004553 KEGG: 00511+3.2.1.45|KEGG: 00600+3.2.1.45|Reactome: R-HSA-1660662 syc1357_c 8a5dd0f7f7f97273b388d52cce7a78b9 514 SUPERFAMILY SSF56112 9 294 4.08E-20 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily syc1357_c 8a5dd0f7f7f97273b388d52cce7a78b9 514 SUPERFAMILY SSF52540 341 500 8.09E-19 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc1357_c 8a5dd0f7f7f97273b388d52cce7a78b9 514 Gene3D G3DSA:3.40.50.300 311 512 3.0E-29 T 11-10-2018 syc1357_c 8a5dd0f7f7f97273b388d52cce7a78b9 514 Pfam PF13671 AAA domain 345 475 2.1E-20 T 11-10-2018 syc1528_c df10ead1489f7daaade1f716b9037132 273 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 218 232 - T 11-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 syc1528_c df10ead1489f7daaade1f716b9037132 273 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 88 101 - T 11-10-2018 IPR020583 Inositol monophosphatase, metal-binding site syc1528_c df10ead1489f7daaade1f716b9037132 273 Pfam PF00459 Inositol monophosphatase family 12 263 2.2E-66 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 syc1528_c df10ead1489f7daaade1f716b9037132 273 PRINTS PR01959 SuhB family inositol monophosphatase signature 205 217 2.0E-5 T 11-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 syc1528_c df10ead1489f7daaade1f716b9037132 273 PRINTS PR01959 SuhB family inositol monophosphatase signature 111 130 2.0E-5 T 11-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 syc1528_c df10ead1489f7daaade1f716b9037132 273 SUPERFAMILY SSF56655 11 264 7.33E-81 T 11-10-2018 syc1528_c df10ead1489f7daaade1f716b9037132 273 Gene3D G3DSA:3.30.540.10 5 146 4.5E-42 T 11-10-2018 syc1528_c df10ead1489f7daaade1f716b9037132 273 Gene3D G3DSA:3.40.190.80 148 269 9.0E-39 T 11-10-2018 syc1528_c df10ead1489f7daaade1f716b9037132 273 PRINTS PR00377 Inositol monophosphatase superfamily signature 45 65 9.1E-52 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 syc1528_c df10ead1489f7daaade1f716b9037132 273 PRINTS PR00377 Inositol monophosphatase superfamily signature 88 104 9.1E-52 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 syc1528_c df10ead1489f7daaade1f716b9037132 273 PRINTS PR00377 Inositol monophosphatase superfamily signature 137 160 9.1E-52 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 syc1528_c df10ead1489f7daaade1f716b9037132 273 PRINTS PR00377 Inositol monophosphatase superfamily signature 67 83 9.1E-52 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 syc1528_c df10ead1489f7daaade1f716b9037132 273 PRINTS PR00377 Inositol monophosphatase superfamily signature 184 205 9.1E-52 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 syc1528_c df10ead1489f7daaade1f716b9037132 273 PRINTS PR00377 Inositol monophosphatase superfamily signature 215 239 9.1E-52 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 syc1749_d 1603a11b8b556e027abaf8f712f5d45a 174 SUPERFAMILY SSF54534 53 172 7.66E-50 T 11-10-2018 syc1749_d 1603a11b8b556e027abaf8f712f5d45a 174 Gene3D G3DSA:3.10.50.40 49 174 8.2E-56 T 11-10-2018 syc1749_d 1603a11b8b556e027abaf8f712f5d45a 174 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 81 170 1.2E-38 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain syc0912_d 1b912ca78305f410ed17ef5804c7ef2d 393 PRINTS PR00143 Citrate synthase signature 135 148 6.1E-46 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 syc0912_d 1b912ca78305f410ed17ef5804c7ef2d 393 PRINTS PR00143 Citrate synthase signature 184 199 6.1E-46 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 syc0912_d 1b912ca78305f410ed17ef5804c7ef2d 393 PRINTS PR00143 Citrate synthase signature 319 335 6.1E-46 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 syc0912_d 1b912ca78305f410ed17ef5804c7ef2d 393 PRINTS PR00143 Citrate synthase signature 259 279 6.1E-46 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 syc0912_d 1b912ca78305f410ed17ef5804c7ef2d 393 PRINTS PR00143 Citrate synthase signature 206 234 6.1E-46 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 syc0912_d 1b912ca78305f410ed17ef5804c7ef2d 393 PRINTS PR00143 Citrate synthase signature 339 353 6.1E-46 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 syc0912_d 1b912ca78305f410ed17ef5804c7ef2d 393 SUPERFAMILY SSF48256 11 386 2.88E-139 T 11-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 syc0912_d 1b912ca78305f410ed17ef5804c7ef2d 393 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 17 386 6.5E-131 T 11-10-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 syc0912_d 1b912ca78305f410ed17ef5804c7ef2d 393 Gene3D G3DSA:1.10.230.10 233 336 1.4E-130 T 11-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain syc0912_d 1b912ca78305f410ed17ef5804c7ef2d 393 ProSitePatterns PS00480 Citrate synthase signature. 266 278 - T 11-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 syc0912_d 1b912ca78305f410ed17ef5804c7ef2d 393 Pfam PF00285 Citrate synthase, C-terminal domain 17 369 5.0E-133 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 syc0912_d 1b912ca78305f410ed17ef5804c7ef2d 393 PIRSF PIRSF001369 8 387 3.4E-159 T 11-10-2018 IPR024176 Citrate synthase, bacterial-type syc0912_d 1b912ca78305f410ed17ef5804c7ef2d 393 Gene3D G3DSA:1.10.580.10 27 360 1.4E-130 T 11-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 syc1077_c a8d89cf1c94a9c575e9eb8e42b6f17df 222 Pfam PF00731 AIR carboxylase 52 196 4.0E-66 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 syc1077_c a8d89cf1c94a9c575e9eb8e42b6f17df 222 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 52 203 32.321 T 11-10-2018 IPR033747 Class I PurE syc1077_c a8d89cf1c94a9c575e9eb8e42b6f17df 222 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 52 206 3.1E-68 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 syc1077_c a8d89cf1c94a9c575e9eb8e42b6f17df 222 SUPERFAMILY SSF52255 51 215 8.89E-67 T 11-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 syc1077_c a8d89cf1c94a9c575e9eb8e42b6f17df 222 Gene3D G3DSA:3.40.50.7700 23 218 5.1E-74 T 11-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 syc1077_c a8d89cf1c94a9c575e9eb8e42b6f17df 222 SMART SM01001 50 199 5.5E-98 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 syc0914_c 6a0d9f5519104dcd0eba599875839356 603 Gene3D G3DSA:2.30.30.60 430 479 3.1E-18 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily syc0914_c 6a0d9f5519104dcd0eba599875839356 603 SUPERFAMILY SSF82861 361 413 6.02E-6 T 11-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 syc0914_c 6a0d9f5519104dcd0eba599875839356 603 SUPERFAMILY SSF82689 478 581 3.27E-17 T 11-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 syc0914_c 6a0d9f5519104dcd0eba599875839356 603 Pfam PF00924 Mechanosensitive ion channel 373 572 2.5E-44 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 syc0914_c 6a0d9f5519104dcd0eba599875839356 603 Gene3D G3DSA:3.30.70.100 482 570 1.6E-22 T 11-10-2018 syc0914_c 6a0d9f5519104dcd0eba599875839356 603 SUPERFAMILY SSF50182 415 477 1.37E-12 T 11-10-2018 IPR010920 LSM domain superfamily syc0784_c 8473c505baa5447d3ff2de30919626cd 474 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 230 357 9.3E-19 T 11-10-2018 IPR035089 Tail sheath protein, subtilisin-like domain syc0784_c 8473c505baa5447d3ff2de30919626cd 474 Pfam PF17482 Phage tail sheath C-terminal domain 360 457 9.9E-13 T 11-10-2018 IPR020287 Tail sheath protein, C-terminal domain syc1086_c b34ccf15ebf4b95d743babf94f0539ba 417 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 7.2E-5 T 11-10-2018 syc1086_c b34ccf15ebf4b95d743babf94f0539ba 417 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 149 167 7.2E-5 T 11-10-2018 syc1086_c b34ccf15ebf4b95d743babf94f0539ba 417 SUPERFAMILY SSF51905 5 367 4.15E-34 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc1086_c b34ccf15ebf4b95d743babf94f0539ba 417 Pfam PF12831 FAD dependent oxidoreductase 9 159 2.5E-7 T 11-10-2018 IPR039649 Digeranylgeranylglycerophospholipid reductase, N-terminal syc1086_c b34ccf15ebf4b95d743babf94f0539ba 417 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 283 290 9.0E-6 T 11-10-2018 syc1086_c b34ccf15ebf4b95d743babf94f0539ba 417 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 9 31 9.0E-6 T 11-10-2018 syc1086_c b34ccf15ebf4b95d743babf94f0539ba 417 Gene3D G3DSA:3.50.50.60 4 381 1.6E-50 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc1535_c 47dbc2d54e0061d7b9a88e8530ec8e5a 313 Gene3D G3DSA:3.40.50.1980 182 305 1.6E-40 T 11-10-2018 syc1535_c 47dbc2d54e0061d7b9a88e8530ec8e5a 313 SUPERFAMILY SSF53807 36 304 5.89E-73 T 11-10-2018 syc1535_c 47dbc2d54e0061d7b9a88e8530ec8e5a 313 PRINTS PR00691 Adhesin B signature 188 205 2.2E-21 T 11-10-2018 IPR006129 Adhesin B GO:0007155 syc1535_c 47dbc2d54e0061d7b9a88e8530ec8e5a 313 PRINTS PR00691 Adhesin B signature 282 300 2.2E-21 T 11-10-2018 IPR006129 Adhesin B GO:0007155 syc1535_c 47dbc2d54e0061d7b9a88e8530ec8e5a 313 PRINTS PR00691 Adhesin B signature 62 80 2.2E-21 T 11-10-2018 IPR006129 Adhesin B GO:0007155 syc1535_c 47dbc2d54e0061d7b9a88e8530ec8e5a 313 PRINTS PR00691 Adhesin B signature 37 58 2.2E-21 T 11-10-2018 IPR006129 Adhesin B GO:0007155 syc1535_c 47dbc2d54e0061d7b9a88e8530ec8e5a 313 PRINTS PR00691 Adhesin B signature 238 255 2.2E-21 T 11-10-2018 IPR006129 Adhesin B GO:0007155 syc1535_c 47dbc2d54e0061d7b9a88e8530ec8e5a 313 Gene3D G3DSA:3.40.50.1980 38 181 8.0E-38 T 11-10-2018 syc1535_c 47dbc2d54e0061d7b9a88e8530ec8e5a 313 Pfam PF01297 Zinc-uptake complex component A periplasmic 40 301 3.2E-71 T 11-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 syc1535_c 47dbc2d54e0061d7b9a88e8530ec8e5a 313 PRINTS PR00690 Adhesin family signature 81 98 2.0E-30 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 syc1535_c 47dbc2d54e0061d7b9a88e8530ec8e5a 313 PRINTS PR00690 Adhesin family signature 68 81 2.0E-30 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 syc1535_c 47dbc2d54e0061d7b9a88e8530ec8e5a 313 PRINTS PR00690 Adhesin family signature 188 209 2.0E-30 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 syc1535_c 47dbc2d54e0061d7b9a88e8530ec8e5a 313 PRINTS PR00690 Adhesin family signature 269 288 2.0E-30 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 syc1535_c 47dbc2d54e0061d7b9a88e8530ec8e5a 313 PRINTS PR00690 Adhesin family signature 37 55 2.0E-30 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 syc1535_c 47dbc2d54e0061d7b9a88e8530ec8e5a 313 PRINTS PR00690 Adhesin family signature 242 260 2.0E-30 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 syc0883_d 4802f2233b6915f6e528b1c28d903104 181 PIRSF PIRSF000239 31 181 8.4E-29 T 11-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 syc0883_d 4802f2233b6915f6e528b1c28d903104 181 Gene3D G3DSA:3.40.30.10 34 179 3.2E-43 T 11-10-2018 syc0883_d 4802f2233b6915f6e528b1c28d903104 181 SUPERFAMILY SSF52833 34 179 9.67E-46 T 11-10-2018 IPR036249 Thioredoxin-like superfamily syc0883_d 4802f2233b6915f6e528b1c28d903104 181 Pfam PF00578 AhpC/TSA family 37 157 7.3E-37 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 syc0551_d fe693f3271a2e2c7bc0d52653c944ffc 462 SUPERFAMILY SSF52540 32 145 8.23E-6 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0551_d fe693f3271a2e2c7bc0d52653c944ffc 462 Gene3D G3DSA:3.40.50.300 115 285 2.4E-7 T 11-10-2018 syc0551_d fe693f3271a2e2c7bc0d52653c944ffc 462 SUPERFAMILY SSF52540 100 273 4.19E-9 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0551_d fe693f3271a2e2c7bc0d52653c944ffc 462 Pfam PF05128 Domain of unknown function (DUF697) 282 417 1.5E-36 T 11-10-2018 IPR021147 Protein of unknown function DUF697 syc0322_c 4f9ca3595189990d378e36bf79b623d3 289 SUPERFAMILY SSF103481 201 288 2.48E-5 T 11-10-2018 syc0322_c 4f9ca3595189990d378e36bf79b623d3 289 SUPERFAMILY SSF103481 45 144 4.05E-12 T 11-10-2018 syc0322_c 4f9ca3595189990d378e36bf79b623d3 289 Pfam PF00892 EamA-like transporter family 165 288 2.7E-10 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 syc0322_c 4f9ca3595189990d378e36bf79b623d3 289 Pfam PF00892 EamA-like transporter family 10 139 1.5E-14 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 syc0166_d 30b695555a944cb340894138c0cd805c 360 Hamap MF_01379 Photosystem II protein D1 [psbA]. 1 347 60.728 T 11-10-2018 IPR005867 Photosystem II protein D1 GO:0009055 MetaCyc: PWY-101 syc0166_d 30b695555a944cb340894138c0cd805c 360 SUPERFAMILY SSF81483 12 343 1.05E-146 T 11-10-2018 IPR036854 Photosystem II protein D1/D2 superfamily GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 syc0166_d 30b695555a944cb340894138c0cd805c 360 Pfam PF00124 Photosynthetic reaction centre protein 28 326 2.5E-98 T 11-10-2018 IPR000484 Photosynthetic reaction centre, L/M GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 syc0166_d 30b695555a944cb340894138c0cd805c 360 ProSitePatterns PS00244 Photosynthetic reaction center proteins signature. 191 217 - T 11-10-2018 IPR000484 Photosynthetic reaction centre, L/M GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 syc0166_d 30b695555a944cb340894138c0cd805c 360 TIGRFAM TIGR01151 psbA: photosystem II q(b) protein 1 360 1.1E-245 T 11-10-2018 IPR005867 Photosystem II protein D1 GO:0009055 MetaCyc: PWY-101 syc0166_d 30b695555a944cb340894138c0cd805c 360 PRINTS PR00256 Bacterial photosynthetic reaction centre signature 197 223 1.6E-5 T 11-10-2018 IPR000484 Photosynthetic reaction centre, L/M GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 syc0166_d 30b695555a944cb340894138c0cd805c 360 PRINTS PR00256 Bacterial photosynthetic reaction centre signature 109 137 1.6E-5 T 11-10-2018 IPR000484 Photosynthetic reaction centre, L/M GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 syc0166_d 30b695555a944cb340894138c0cd805c 360 Gene3D G3DSA:1.20.85.10 142 298 4.3E-25 T 11-10-2018 IPR036854 Photosystem II protein D1/D2 superfamily GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 syc0853_c a68a496c0692ab5240e41b9dd0021b3f 406 SUPERFAMILY SSF53756 85 398 7.01E-16 T 11-10-2018 syc0853_c a68a496c0692ab5240e41b9dd0021b3f 406 TIGRFAM TIGR03492 TIGR03492: conserved hypothetical protein 10 397 6.1E-139 T 11-10-2018 IPR019994 Conserved hypothetical protein CHP03492 syc1982_d 7ee3d292ee6d1f619bf2b0d2e72b81f1 327 SUPERFAMILY SSF50486 206 325 1.73E-23 T 11-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 syc1982_d 7ee3d292ee6d1f619bf2b0d2e72b81f1 327 Pfam PF00551 Formyl transferase 2 181 1.4E-43 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 syc1982_d 7ee3d292ee6d1f619bf2b0d2e72b81f1 327 Pfam PF02911 Formyl transferase, C-terminal domain 206 317 5.2E-24 T 11-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 syc1982_d 7ee3d292ee6d1f619bf2b0d2e72b81f1 327 Gene3D G3DSA:3.40.50.12230 1 325 3.7E-95 T 11-10-2018 syc1982_d 7ee3d292ee6d1f619bf2b0d2e72b81f1 327 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 2 318 2.1E-84 T 11-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 syc1982_d 7ee3d292ee6d1f619bf2b0d2e72b81f1 327 SUPERFAMILY SSF53328 2 207 4.45E-63 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 syc1982_d 7ee3d292ee6d1f619bf2b0d2e72b81f1 327 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 1 320 35.052 T 11-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 syc1812_d 78bd178df24bc52dd2327309f89beef4 178 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 17 129 7.8E-16 T 11-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 syc1812_d 78bd178df24bc52dd2327309f89beef4 178 Pfam PF08282 haloacid dehalogenase-like hydrolase 91 147 1.0E-12 T 11-10-2018 syc1812_d 78bd178df24bc52dd2327309f89beef4 178 Gene3D G3DSA:3.40.50.1000 5 174 2.6E-56 T 11-10-2018 IPR023214 HAD superfamily syc1812_d 78bd178df24bc52dd2327309f89beef4 178 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 16 167 2.0E-50 T 11-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 syc1812_d 78bd178df24bc52dd2327309f89beef4 178 SUPERFAMILY SSF56784 12 171 6.46E-43 T 11-10-2018 IPR036412 HAD-like superfamily syc1812_d 78bd178df24bc52dd2327309f89beef4 178 PIRSF PIRSF006118 5 175 2.5E-63 T 11-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 syc0482_c 7dd945e9e8d673e43d5eee3473ea73b0 182 SUPERFAMILY SSF158668 23 166 1.83E-15 T 11-10-2018 IPR038026 MtlR-like superfamily syc0482_c 7dd945e9e8d673e43d5eee3473ea73b0 182 Pfam PF13643 Domain of unknown function (DUF4145) 43 114 6.5E-5 T 11-10-2018 IPR025285 Domain of unknown function DUF4145 syc2086_c 29342ab9af026987a1061e510b84bd30 922 Gene3D G3DSA:3.40.50.300 700 921 1.6E-32 T 11-10-2018 syc2086_c 29342ab9af026987a1061e510b84bd30 922 Pfam PF13175 AAA ATPase domain 1 45 5.6E-9 T 11-10-2018 syc2086_c 29342ab9af026987a1061e510b84bd30 922 SUPERFAMILY SSF52540 1 917 3.98E-32 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc2086_c 29342ab9af026987a1061e510b84bd30 922 Pfam PF02463 RecF/RecN/SMC N terminal domain 563 919 5.3E-12 T 11-10-2018 IPR003395 RecF/RecN/SMC, N-terminal syc1126_d 7798a6fe72bbadde26e5307126f32c5e 394 Gene3D G3DSA:3.40.50.2000 137 386 2.9E-55 T 11-10-2018 syc1126_d 7798a6fe72bbadde26e5307126f32c5e 394 Pfam PF13439 Glycosyltransferase Family 4 130 206 4.4E-8 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 syc1126_d 7798a6fe72bbadde26e5307126f32c5e 394 SUPERFAMILY SSF53756 53 393 8.03E-74 T 11-10-2018 syc1126_d 7798a6fe72bbadde26e5307126f32c5e 394 Gene3D G3DSA:3.40.50.2000 205 374 2.9E-55 T 11-10-2018 syc1126_d 7798a6fe72bbadde26e5307126f32c5e 394 Pfam PF00534 Glycosyl transferases group 1 210 370 1.5E-35 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 syc1425_d a0d18181f7796f1c6cfacdc1dfd28ea1 148 Gene3D G3DSA:2.40.50.140 1 98 7.9E-24 T 11-10-2018 syc1425_d a0d18181f7796f1c6cfacdc1dfd28ea1 148 SUPERFAMILY SSF50249 1 148 7.2E-24 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold syc1425_d a0d18181f7796f1c6cfacdc1dfd28ea1 148 Pfam PF00436 Single-strand binding protein family 1 98 1.0E-11 T 11-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 syc0800_c 5def355193fb19116c1cce215392d999 626 Gene3D G3DSA:3.40.50.300 27 233 8.1E-11 T 11-10-2018 syc0800_c 5def355193fb19116c1cce215392d999 626 Pfam PF05876 Phage terminase large subunit (GpA) 36 586 6.9E-207 T 11-10-2018 IPR008866 Bacteriophage lambda, GpA syc0219_c 0ebe7ac4976588aa1d64d51f7f671ac1 264 SUPERFAMILY SSF56752 1 248 2.88E-62 T 11-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 syc0219_c 0ebe7ac4976588aa1d64d51f7f671ac1 264 Pfam PF01063 Amino-transferase class IV 29 242 1.2E-45 T 11-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 syc0219_c 0ebe7ac4976588aa1d64d51f7f671ac1 264 Gene3D G3DSA:3.20.10.10 118 256 2.1E-32 T 11-10-2018 syc0219_c 0ebe7ac4976588aa1d64d51f7f671ac1 264 Gene3D G3DSA:3.30.470.10 1 113 2.6E-30 T 11-10-2018 syc1703_c 97e996a554952267238158e692cb5fef 376 SUPERFAMILY SSF55909 33 371 3.93E-117 T 11-10-2018 syc1703_c 97e996a554952267238158e692cb5fef 376 Gene3D G3DSA:3.75.10.10 34 376 3.0E-121 T 11-10-2018 syc1703_c 97e996a554952267238158e692cb5fef 376 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 38 370 3.1E-112 T 11-10-2018 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 syc0688_c 470fff2752f338b64d38a32122a1acbf 158 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 11 74 1.4E-14 T 11-10-2018 IPR025161 Putative transposase IS4/IS5 family syc0224_c c11b982e3a50e13aa3ea17a35c6530ba 188 SUPERFAMILY SSF53335 22 167 1.21E-17 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase syc0224_c c11b982e3a50e13aa3ea17a35c6530ba 188 Pfam PF08241 Methyltransferase domain 93 147 1.2E-10 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 syc0224_c c11b982e3a50e13aa3ea17a35c6530ba 188 Gene3D G3DSA:3.40.50.150 30 183 1.0E-15 T 11-10-2018 syc1520_c 25052072b00a47160a976cc4e0124cbd 171 Gene3D G3DSA:3.30.700.10 16 152 4.3E-5 T 11-10-2018 syc1520_c 25052072b00a47160a976cc4e0124cbd 171 SUPERFAMILY SSF54523 16 143 2.83E-6 T 11-10-2018 syc1520_c 25052072b00a47160a976cc4e0124cbd 171 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 13 34 9.5E-4 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site syc1835_d 784e44808ee0b7921d9fb752f2039de0 435 Gene3D G3DSA:3.30.930.10 1 323 7.0E-114 T 11-10-2018 syc1835_d 784e44808ee0b7921d9fb752f2039de0 435 Pfam PF03129 Anticodon binding domain 339 411 9.1E-15 T 11-10-2018 IPR004154 Anticodon-binding syc1835_d 784e44808ee0b7921d9fb752f2039de0 435 PIRSF PIRSF001549 1 415 2.5E-114 T 11-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 syc1835_d 784e44808ee0b7921d9fb752f2039de0 435 SUPERFAMILY SSF52954 324 411 1.96E-21 T 11-10-2018 syc1835_d 784e44808ee0b7921d9fb752f2039de0 435 Pfam PF13393 Histidyl-tRNA synthetase 9 311 5.7E-47 T 11-10-2018 syc1835_d 784e44808ee0b7921d9fb752f2039de0 435 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 2 423 32.698 T 11-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 syc1835_d 784e44808ee0b7921d9fb752f2039de0 435 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 5 406 2.5E-149 T 11-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 syc1835_d 784e44808ee0b7921d9fb752f2039de0 435 SUPERFAMILY SSF55681 5 316 1.15E-98 T 11-10-2018 syc1835_d 784e44808ee0b7921d9fb752f2039de0 435 Gene3D G3DSA:3.40.50.800 326 417 4.4E-20 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily syc1551_d 927904e3daa428df99a56833cf8ae372 152 Pfam PF03948 Ribosomal protein L9, C-terminal domain 68 150 5.4E-22 T 11-10-2018 IPR020069 Ribosomal protein L9, C-terminal syc1551_d 927904e3daa428df99a56833cf8ae372 152 TIGRFAM TIGR00158 L9: ribosomal protein bL9 5 151 5.4E-44 T 11-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc1551_d 927904e3daa428df99a56833cf8ae372 152 Pfam PF01281 Ribosomal protein L9, N-terminal domain 5 50 4.1E-20 T 11-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc1551_d 927904e3daa428df99a56833cf8ae372 152 ProSitePatterns PS00651 Ribosomal protein L9 signature. 17 44 - T 11-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc1551_d 927904e3daa428df99a56833cf8ae372 152 SUPERFAMILY SSF55653 61 150 3.4E-21 T 11-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily syc1551_d 927904e3daa428df99a56833cf8ae372 152 Gene3D G3DSA:3.10.430.100 66 151 4.3E-20 T 11-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily syc1551_d 927904e3daa428df99a56833cf8ae372 152 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 5 152 24.183 T 11-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc1551_d 927904e3daa428df99a56833cf8ae372 152 SUPERFAMILY SSF55658 5 60 2.09E-16 T 11-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal syc1551_d 927904e3daa428df99a56833cf8ae372 152 Gene3D G3DSA:3.40.5.10 5 54 1.2E-18 T 11-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc2231_c 52f898502934c80e65ccc26c4774e345 293 Gene3D G3DSA:3.40.50.150 91 292 5.0E-60 T 11-10-2018 syc2231_c 52f898502934c80e65ccc26c4774e345 293 SUPERFAMILY SSF53335 20 288 4.78E-46 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase syc2231_c 52f898502934c80e65ccc26c4774e345 293 Gene3D G3DSA:1.10.8.10 5 90 7.1E-6 T 11-10-2018 syc2231_c 52f898502934c80e65ccc26c4774e345 293 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 58 291 5.0E-67 T 11-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 syc2231_c 52f898502934c80e65ccc26c4774e345 293 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 194 200 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 syc2231_c 52f898502934c80e65ccc26c4774e345 293 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 8 291 38.485 T 11-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 syc2231_c 52f898502934c80e65ccc26c4774e345 293 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 29 287 9.0E-70 T 11-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 syc2231_c 52f898502934c80e65ccc26c4774e345 293 Pfam PF05175 Methyltransferase small domain 121 201 2.6E-12 T 11-10-2018 IPR007848 Methyltransferase small domain GO:0008168 syc0422_c 1d1a0bcd1f74f4c77056156be6cc8076 489 Gene3D G3DSA:3.30.2290.10 17 250 1.4E-10 T 11-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal syc0422_c 1d1a0bcd1f74f4c77056156be6cc8076 489 SUPERFAMILY SSF111283 29 489 4.58E-107 T 11-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 syc0422_c 1d1a0bcd1f74f4c77056156be6cc8076 489 Pfam PF01523 Putative modulator of DNA gyrase 45 344 8.0E-50 T 11-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 syc1557_d 3bb78934a6c4339bcff974555eb9a55f 112 Gene3D G3DSA:3.30.2320.80 1 112 6.6E-28 T 11-10-2018 syc1557_d 3bb78934a6c4339bcff974555eb9a55f 112 Hamap MF_00213 Hydrogenase maturation factor HypA [hypA]. 1 112 19.554 T 11-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 syc1557_d 3bb78934a6c4339bcff974555eb9a55f 112 ProSitePatterns PS01249 Hydrogenases expression/synthesis hypA family signature. 34 76 - T 11-10-2018 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site syc1557_d 3bb78934a6c4339bcff974555eb9a55f 112 TIGRFAM TIGR00100 hypA: hydrogenase nickel insertion protein HypA 1 111 5.0E-30 T 11-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 syc1557_d 3bb78934a6c4339bcff974555eb9a55f 112 PIRSF PIRSF004761 1 112 5.6E-33 T 11-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 syc1557_d 3bb78934a6c4339bcff974555eb9a55f 112 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 2 111 6.5E-28 T 11-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 syc1021_d 1c7ad5aeccdb2ba97e2aeef3644bdb33 350 SUPERFAMILY SSF53335 110 347 5.96E-55 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase syc1021_d 1c7ad5aeccdb2ba97e2aeef3644bdb33 350 Pfam PF16864 Dimerisation domain 26 101 5.0E-11 T 11-10-2018 IPR031725 Acetylserotonin O-methyltransferase, dimerisation domain syc1021_d 1c7ad5aeccdb2ba97e2aeef3644bdb33 350 Gene3D G3DSA:1.10.10.10 10 110 6.4E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily syc1021_d 1c7ad5aeccdb2ba97e2aeef3644bdb33 350 Gene3D G3DSA:3.40.50.150 111 349 1.4E-76 T 11-10-2018 syc1021_d 1c7ad5aeccdb2ba97e2aeef3644bdb33 350 Pfam PF00891 O-methyltransferase 114 333 2.8E-56 T 11-10-2018 IPR001077 O-methyltransferase, family 2 GO:0008171 syc1021_d 1c7ad5aeccdb2ba97e2aeef3644bdb33 350 SUPERFAMILY SSF46785 16 105 6.87E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily syc1021_d 1c7ad5aeccdb2ba97e2aeef3644bdb33 350 PIRSF PIRSF005739 11 347 3.8E-66 T 11-10-2018 IPR016461 O-methyltransferase COMT-type GO:0008168 syc0423_d d6c7097d94f17fc4b6066fa770b76a1c 277 Pfam PF01061 ABC-2 type transporter 25 239 3.0E-24 T 11-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 syc0873_c ee9adf8d789e2b4aea3176cecbd814ae 352 TIGRFAM TIGR01152 psbD: photosystem II D2 protein (photosystem q(a) protein) 1 352 4.2E-235 T 11-10-2018 IPR005868 Photosystem II D2 protein GO:0009523|GO:0015979|GO:0016020|GO:0019684|GO:0045156 MetaCyc: PWY-101 syc0873_c ee9adf8d789e2b4aea3176cecbd814ae 352 SUPERFAMILY SSF81483 13 351 4.97E-127 T 11-10-2018 IPR036854 Photosystem II protein D1/D2 superfamily GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 syc0873_c ee9adf8d789e2b4aea3176cecbd814ae 352 PRINTS PR00256 Bacterial photosynthetic reaction centre signature 141 163 1.4E-9 T 11-10-2018 IPR000484 Photosynthetic reaction centre, L/M GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 syc0873_c ee9adf8d789e2b4aea3176cecbd814ae 352 PRINTS PR00256 Bacterial photosynthetic reaction centre signature 108 136 1.4E-9 T 11-10-2018 IPR000484 Photosynthetic reaction centre, L/M GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 syc0873_c ee9adf8d789e2b4aea3176cecbd814ae 352 PRINTS PR00256 Bacterial photosynthetic reaction centre signature 196 222 1.4E-9 T 11-10-2018 IPR000484 Photosynthetic reaction centre, L/M GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 syc0873_c ee9adf8d789e2b4aea3176cecbd814ae 352 Hamap MF_01383 Photosystem II D2 protein [psbD]. 1 352 62.469 T 11-10-2018 IPR005868 Photosystem II D2 protein GO:0009523|GO:0015979|GO:0016020|GO:0019684|GO:0045156 MetaCyc: PWY-101 syc0873_c ee9adf8d789e2b4aea3176cecbd814ae 352 ProSitePatterns PS00244 Photosynthetic reaction center proteins signature. 190 216 - T 11-10-2018 IPR000484 Photosynthetic reaction centre, L/M GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 syc0873_c ee9adf8d789e2b4aea3176cecbd814ae 352 Gene3D G3DSA:1.20.85.10 141 297 5.2E-21 T 11-10-2018 IPR036854 Photosystem II protein D1/D2 superfamily GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 syc0873_c ee9adf8d789e2b4aea3176cecbd814ae 352 Pfam PF00124 Photosynthetic reaction centre protein 28 317 2.6E-74 T 11-10-2018 IPR000484 Photosynthetic reaction centre, L/M GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 syc1396_c 99cc71ba2f562795cf28d4a4c286b22d 86 PIRSF PIRSF017267 1 86 1.4E-20 T 11-10-2018 IPR016692 Sulfiredoxin GO:0032542|GO:0055114 syc1396_c 99cc71ba2f562795cf28d4a4c286b22d 86 Gene3D G3DSA:3.90.1530.10 1 86 1.4E-24 T 11-10-2018 syc1396_c 99cc71ba2f562795cf28d4a4c286b22d 86 Pfam PF02195 ParB-like nuclease domain 5 78 2.1E-17 T 11-10-2018 IPR003115 ParB/Sulfiredoxin syc1396_c 99cc71ba2f562795cf28d4a4c286b22d 86 SUPERFAMILY SSF110849 2 85 4.01E-27 T 11-10-2018 IPR036086 ParB/Sulfiredoxin superfamily syc1396_c 99cc71ba2f562795cf28d4a4c286b22d 86 SMART SM00470 4 86 9.8E-12 T 11-10-2018 IPR003115 ParB/Sulfiredoxin syc0121_d 2f663215fdfaf56bbb43624887531b2c 582 Gene3D G3DSA:3.40.50.970 11 182 5.5E-61 T 11-10-2018 syc0121_d 2f663215fdfaf56bbb43624887531b2c 582 SUPERFAMILY SSF52518 14 196 2.32E-36 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold syc0121_d 2f663215fdfaf56bbb43624887531b2c 582 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 20 452 7.8E-147 T 11-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 syc0121_d 2f663215fdfaf56bbb43624887531b2c 582 Gene3D G3DSA:3.40.50.970 387 579 2.2E-59 T 11-10-2018 syc0121_d 2f663215fdfaf56bbb43624887531b2c 582 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 14 575 36.285 T 11-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 syc0121_d 2f663215fdfaf56bbb43624887531b2c 582 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 427 546 4.1E-9 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 syc0121_d 2f663215fdfaf56bbb43624887531b2c 582 SUPERFAMILY SSF52518 388 570 1.18E-24 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold syc0121_d 2f663215fdfaf56bbb43624887531b2c 582 Gene3D G3DSA:3.40.50.1220 218 385 3.3E-38 T 11-10-2018 syc0121_d 2f663215fdfaf56bbb43624887531b2c 582 PIRSF PIRSF004983 11 581 5.6E-171 T 11-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 syc0121_d 2f663215fdfaf56bbb43624887531b2c 582 Pfam PF16582 Middle domain of thiamine pyrophosphate 229 409 6.3E-18 T 11-10-2018 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 syc0121_d 2f663215fdfaf56bbb43624887531b2c 582 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 21 192 1.6E-32 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 syc0479_d 8f3d75e36a73b0e32b20f9f6fcc79646 373 Pfam PF13534 4Fe-4S dicluster domain 279 350 1.3E-7 T 11-10-2018 syc0479_d 8f3d75e36a73b0e32b20f9f6fcc79646 373 SUPERFAMILY SSF46548 264 365 7.15E-13 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 syc0479_d 8f3d75e36a73b0e32b20f9f6fcc79646 373 SUPERFAMILY SSF51430 1 309 9.04E-53 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily syc0479_d 8f3d75e36a73b0e32b20f9f6fcc79646 373 Pfam PF00248 Aldo/keto reductase family 26 199 1.8E-21 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain syc0479_d 8f3d75e36a73b0e32b20f9f6fcc79646 373 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 335 346 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site syc0479_d 8f3d75e36a73b0e32b20f9f6fcc79646 373 Gene3D G3DSA:3.20.20.100 1 251 1.8E-44 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily syc0585_c 1791e8ada0cbf22e765fdef286ea6bf5 215 PIRSF PIRSF015617 17 215 2.4E-74 T 11-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 syc0585_c 1791e8ada0cbf22e765fdef286ea6bf5 215 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 18 37 2.3E-7 T 11-10-2018 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17 syc0585_c 1791e8ada0cbf22e765fdef286ea6bf5 215 Gene3D G3DSA:3.40.50.300 22 215 7.9E-67 T 11-10-2018 syc0585_c 1791e8ada0cbf22e765fdef286ea6bf5 215 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 42 215 1.2E-75 T 11-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 syc0585_c 1791e8ada0cbf22e765fdef286ea6bf5 215 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 43 215 2.3E-61 T 11-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 syc0585_c 1791e8ada0cbf22e765fdef286ea6bf5 215 SUPERFAMILY SSF52540 23 215 4.39E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0082_c c4ccf26c7fb848a834d53274a24cf3a7 244 Gene3D G3DSA:2.40.30.20 26 113 5.5E-23 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 syc0082_c c4ccf26c7fb848a834d53274a24cf3a7 244 Gene3D G3DSA:2.40.30.20 126 228 2.2E-31 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 syc0082_c c4ccf26c7fb848a834d53274a24cf3a7 244 Pfam PF00677 Lumazine binding domain 28 109 3.5E-17 T 11-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 syc0082_c c4ccf26c7fb848a834d53274a24cf3a7 244 Pfam PF00677 Lumazine binding domain 124 210 8.3E-25 T 11-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 syc0082_c c4ccf26c7fb848a834d53274a24cf3a7 244 PIRSF PIRSF000498 26 238 2.0E-63 T 11-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 syc0082_c c4ccf26c7fb848a834d53274a24cf3a7 244 SUPERFAMILY SSF63380 26 114 2.3E-21 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel syc0082_c c4ccf26c7fb848a834d53274a24cf3a7 244 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 26 223 7.5E-67 T 11-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 syc0082_c c4ccf26c7fb848a834d53274a24cf3a7 244 SUPERFAMILY SSF63380 118 223 6.29E-31 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel syc1935_c 6f7e2eb6c5211292688a2bf2a000193b 310 Gene3D G3DSA:3.40.50.1820 16 299 6.3E-29 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold syc1935_c 6f7e2eb6c5211292688a2bf2a000193b 310 Pfam PF12697 Alpha/beta hydrolase family 36 289 1.0E-8 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 syc1935_c 6f7e2eb6c5211292688a2bf2a000193b 310 SUPERFAMILY SSF53474 17 298 1.03E-30 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold syc1068_d 1e8bbf6ea9d725a6cf2e4a4d2adc2b47 81 SUPERFAMILY SSF117916 10 80 3.11E-25 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily syc1068_d 1e8bbf6ea9d725a6cf2e4a4d2adc2b47 81 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 17 80 2.0E-30 T 11-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 syc1068_d 1e8bbf6ea9d725a6cf2e4a4d2adc2b47 81 Gene3D G3DSA:3.30.300.130 5 81 7.3E-33 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily syc1068_d 1e8bbf6ea9d725a6cf2e4a4d2adc2b47 81 Pfam PF01106 NifU-like domain 13 78 2.2E-28 T 11-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 syc0744_d 9d2470682547d2da6bc612fb3ffade1b 222 Pfam PF04012 PspA/IM30 family 10 175 5.8E-23 T 11-10-2018 IPR007157 PspA/IM30 syc0904_c 22a686d3cb6bb3804e9e132e2efc6341 234 Pfam PF04402 Protein of unknown function (DUF541) 35 230 2.7E-36 T 11-10-2018 IPR007497 Protein of unknown function DUF541 syc0904_c 22a686d3cb6bb3804e9e132e2efc6341 234 Gene3D G3DSA:3.30.70.2970 47 150 5.7E-38 T 11-10-2018 syc0904_c 22a686d3cb6bb3804e9e132e2efc6341 234 Gene3D G3DSA:3.30.110.170 37 230 5.7E-38 T 11-10-2018 syc0238_d 9ca0e7ae5107e4657e84af8c7e55e249 466 Pfam PF01134 Glucose inhibited division protein A 8 381 2.7E-107 T 11-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 syc0238_d 9ca0e7ae5107e4657e84af8c7e55e249 466 Hamap MF_01037 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO [trmFO]. 8 448 34.554 T 11-10-2018 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 syc0238_d 9ca0e7ae5107e4657e84af8c7e55e249 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 364 379 6.7E-5 T 11-10-2018 syc0238_d 9ca0e7ae5107e4657e84af8c7e55e249 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 6.7E-5 T 11-10-2018 syc0238_d 9ca0e7ae5107e4657e84af8c7e55e249 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 134 143 6.7E-5 T 11-10-2018 syc0238_d 9ca0e7ae5107e4657e84af8c7e55e249 466 TIGRFAM TIGR00137 gid_trmFO: tRNA:m(5)U-54 methyltransferase 6 448 2.1E-208 T 11-10-2018 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 syc0238_d 9ca0e7ae5107e4657e84af8c7e55e249 466 Gene3D G3DSA:3.50.50.60 5 179 3.2E-48 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc0238_d 9ca0e7ae5107e4657e84af8c7e55e249 466 Gene3D G3DSA:3.50.50.60 306 458 5.8E-43 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc0238_d 9ca0e7ae5107e4657e84af8c7e55e249 466 SUPERFAMILY SSF51905 4 381 9.23E-26 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc2315_d ecf3eb679390a87c733c9d18acd4ab78 622 Gene3D G3DSA:1.10.510.10 143 339 1.6E-6 T 11-10-2018 syc2315_d ecf3eb679390a87c733c9d18acd4ab78 622 Pfam PF03109 ABC1 family 131 248 2.6E-35 T 11-10-2018 IPR004147 UbiB domain syc2315_d ecf3eb679390a87c733c9d18acd4ab78 622 SUPERFAMILY SSF56112 113 356 5.54E-28 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily syc0030_d a0247b3c6243264238048661010d80a2 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 188 205 2.4E-43 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR syc0030_d a0247b3c6243264238048661010d80a2 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 223 243 2.4E-43 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR syc0030_d a0247b3c6243264238048661010d80a2 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 186 2.4E-43 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR syc0030_d a0247b3c6243264238048661010d80a2 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.4E-43 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR syc0030_d a0247b3c6243264238048661010d80a2 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 93 104 2.4E-43 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR syc0030_d a0247b3c6243264238048661010d80a2 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 157 2.4E-43 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR syc0030_d a0247b3c6243264238048661010d80a2 266 Gene3D G3DSA:3.40.50.720 1 262 1.6E-84 T 11-10-2018 syc0030_d a0247b3c6243264238048661010d80a2 266 SUPERFAMILY SSF51735 6 260 6.91E-84 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily syc0030_d a0247b3c6243264238048661010d80a2 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 93 104 2.2E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR syc0030_d a0247b3c6243264238048661010d80a2 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 167 186 2.2E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR syc0030_d a0247b3c6243264238048661010d80a2 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 155 2.2E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR syc0030_d a0247b3c6243264238048661010d80a2 266 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 259 1.1E-63 T 11-10-2018 syc1673_c cbf2b881d1253bcdeaacf0ee763c265e 306 SUPERFAMILY SSF53474 13 294 2.01E-56 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold syc1673_c cbf2b881d1253bcdeaacf0ee763c265e 306 PRINTS PR00111 Alpha/beta hydrolase fold signature 104 117 2.7E-8 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 syc1673_c cbf2b881d1253bcdeaacf0ee763c265e 306 PRINTS PR00111 Alpha/beta hydrolase fold signature 60 75 2.7E-8 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 syc1673_c cbf2b881d1253bcdeaacf0ee763c265e 306 PRINTS PR00111 Alpha/beta hydrolase fold signature 118 131 2.7E-8 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 syc1673_c cbf2b881d1253bcdeaacf0ee763c265e 306 Gene3D G3DSA:3.40.50.1820 6 302 3.7E-53 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold syc1673_c cbf2b881d1253bcdeaacf0ee763c265e 306 PRINTS PR00412 Epoxide hydrolase signature 271 293 1.5E-5 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 syc1673_c cbf2b881d1253bcdeaacf0ee763c265e 306 PRINTS PR00412 Epoxide hydrolase signature 41 59 1.5E-5 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 syc1673_c cbf2b881d1253bcdeaacf0ee763c265e 306 PRINTS PR00412 Epoxide hydrolase signature 118 131 1.5E-5 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 syc1673_c cbf2b881d1253bcdeaacf0ee763c265e 306 Pfam PF12697 Alpha/beta hydrolase family 37 287 2.7E-21 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 syc1356_d 9fef38c3ad1b67417c1690a44a15c129 185 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 102 181 6.9E-31 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 syc1356_d 9fef38c3ad1b67417c1690a44a15c129 185 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 105 181 2.4E-30 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 syc1356_d 9fef38c3ad1b67417c1690a44a15c129 185 Gene3D G3DSA:3.30.160.70 14 99 5.8E-8 T 11-10-2018 syc1356_d 9fef38c3ad1b67417c1690a44a15c129 185 SUPERFAMILY SSF53155 22 98 1.37E-13 T 11-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 syc1356_d 9fef38c3ad1b67417c1690a44a15c129 185 SUPERFAMILY SSF46767 103 182 1.44E-29 T 11-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 syc1356_d 9fef38c3ad1b67417c1690a44a15c129 185 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 152 158 - T 11-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 syc1356_d 9fef38c3ad1b67417c1690a44a15c129 185 Gene3D G3DSA:1.10.10.10 100 183 1.1E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily syc2088_d d390fc364b5af5cb72c8efcddb83efbe 166 Pfam PF01467 Cytidylyltransferase-like 4 132 2.3E-19 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 syc2088_d d390fc364b5af5cb72c8efcddb83efbe 166 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 10 76 0.001 T 11-10-2018 syc2088_d d390fc364b5af5cb72c8efcddb83efbe 166 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 62 8.4E-19 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 syc2088_d d390fc364b5af5cb72c8efcddb83efbe 166 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 3 155 3.5E-62 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 syc2088_d d390fc364b5af5cb72c8efcddb83efbe 166 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 84 100 4.1E-55 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 syc2088_d d390fc364b5af5cb72c8efcddb83efbe 166 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 19 40 4.1E-55 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 syc2088_d d390fc364b5af5cb72c8efcddb83efbe 166 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 111 133 4.1E-55 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 syc2088_d d390fc364b5af5cb72c8efcddb83efbe 166 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 1 19 4.1E-55 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 syc2088_d d390fc364b5af5cb72c8efcddb83efbe 166 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 48 72 4.1E-55 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 syc2088_d d390fc364b5af5cb72c8efcddb83efbe 166 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 1 157 35.377 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 syc2088_d d390fc364b5af5cb72c8efcddb83efbe 166 Gene3D G3DSA:3.40.50.620 2 157 1.8E-55 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold syc2088_d d390fc364b5af5cb72c8efcddb83efbe 166 SUPERFAMILY SSF52374 3 154 3.56E-43 T 11-10-2018 syc0418_c cccb35d50cd94bfa9b8a86fb263beaa5 73 ProDom PD015034 FERREDOXIN-THIOREDOXIN VARIABLE CHAIN REDUCTASE REDUCTASE SUBUNIT A THIOREDOXIN OXIDOREDUCTASE FTR-V 1 73 2.0E-37 T 11-10-2018 IPR004207 Ferredoxin thioredoxin reductase, alpha chain GO:0015979 syc0418_c cccb35d50cd94bfa9b8a86fb263beaa5 73 Pfam PF02941 Ferredoxin thioredoxin reductase variable alpha chain 3 69 7.3E-34 T 11-10-2018 IPR004207 Ferredoxin thioredoxin reductase, alpha chain GO:0015979 syc0418_c cccb35d50cd94bfa9b8a86fb263beaa5 73 Gene3D G3DSA:2.30.30.50 1 73 1.1E-31 T 11-10-2018 syc0418_c cccb35d50cd94bfa9b8a86fb263beaa5 73 SUPERFAMILY SSF50090 1 73 3.3E-30 T 11-10-2018 IPR008990 Electron transport accessory-like domain superfamily syc2065_d 846305562e18ced9c9dc529e61985667 250 Pfam PF00427 Phycobilisome Linker polypeptide 39 160 6.6E-44 T 11-10-2018 IPR001297 Phycobilisome linker domain GO:0015979|GO:0030089 syc2065_d 846305562e18ced9c9dc529e61985667 250 Gene3D G3DSA:1.10.3130.20 30 165 1.2E-42 T 11-10-2018 IPR038255 Phycobilisome linker domain superfamily syc2065_d 846305562e18ced9c9dc529e61985667 250 ProDom PD000852 PHYCOBILISOME LINKER POLYPEPTIDE PHOTOSYNTHESIS ELECTRON REPEAT ANCHOR ROD-CORE CHLOROPLAST ROD 45 162 3.0E-64 T 11-10-2018 IPR001297 Phycobilisome linker domain GO:0015979|GO:0030089 syc2154_c ac9b3c176fae654007d28041b4a71a27 419 SUPERFAMILY SSF103473 8 407 9.16E-23 T 11-10-2018 IPR036259 MFS transporter superfamily syc2154_c ac9b3c176fae654007d28041b4a71a27 419 Gene3D G3DSA:1.20.1250.20 9 407 4.3E-21 T 11-10-2018 syc2484_c 98c860e83377af06b907ea80c95b1f04 99 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 42 50 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 syc2484_c 98c860e83377af06b907ea80c95b1f04 99 SUPERFAMILY SSF54292 6 98 4.06E-33 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 syc2484_c 98c860e83377af06b907ea80c95b1f04 99 Gene3D G3DSA:3.10.20.30 1 99 5.9E-36 T 11-10-2018 IPR012675 Beta-grasp domain superfamily syc2484_c 98c860e83377af06b907ea80c95b1f04 99 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 13 85 1.9E-22 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 syc2484_c 98c860e83377af06b907ea80c95b1f04 99 TIGRFAM TIGR02008 fdx_plant: ferredoxin [2Fe-2S] 2 99 5.4E-53 T 11-10-2018 IPR010241 Ferredoxin [2Fe-2S], plant GO:0009055|GO:0022900|GO:0051537 syc1124_d 6caab4705c8b2632980c6d7bc04ba196 526 Pfam PF07176 Alpha/beta hydrolase of unknown function (DUF1400) 30 158 1.4E-26 T 11-10-2018 IPR010802 Domain of unknown function DUF1400 syc1124_d 6caab4705c8b2632980c6d7bc04ba196 526 Pfam PF03403 Platelet-activating factor acetylhydrolase, isoform II 232 276 2.6E-8 T 11-10-2018 IPR005065 Platelet-activating factor acetylhydrolase-like GO:0003847|GO:0016042 KEGG: 00565+3.1.1.47 syc1124_d 6caab4705c8b2632980c6d7bc04ba196 526 SUPERFAMILY SSF53474 197 500 7.34E-36 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold syc1124_d 6caab4705c8b2632980c6d7bc04ba196 526 SUPERFAMILY SSF56266 19 120 1.36E-5 T 11-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 syc0206_d c98e97c9adaec8fe908aec7d0de3eee0 331 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 223 239 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site syc0206_d c98e97c9adaec8fe908aec7d0de3eee0 331 SUPERFAMILY SSF52283 2 135 1.02E-37 T 11-10-2018 syc0206_d c98e97c9adaec8fe908aec7d0de3eee0 331 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 297 1.5E-53 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 syc0206_d c98e97c9adaec8fe908aec7d0de3eee0 331 SUPERFAMILY SSF51735 102 298 7.9E-56 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily syc0206_d c98e97c9adaec8fe908aec7d0de3eee0 331 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 194 216 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site syc0206_d c98e97c9adaec8fe908aec7d0de3eee0 331 Gene3D G3DSA:3.40.50.720 2 317 6.9E-132 T 11-10-2018 syc0206_d c98e97c9adaec8fe908aec7d0de3eee0 331 Gene3D G3DSA:3.40.50.720 102 297 6.9E-132 T 11-10-2018 syc0206_d c98e97c9adaec8fe908aec7d0de3eee0 331 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 4 327 1.6E-26 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 syc0206_d c98e97c9adaec8fe908aec7d0de3eee0 331 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 147 174 - T 11-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 syc1533_d 44e3b253bb0d9c877b3685f8d4087bf4 307 Gene3D G3DSA:3.40.50.10490 8 223 2.3E-70 T 11-10-2018 syc1533_d 44e3b253bb0d9c877b3685f8d4087bf4 307 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 7 300 38.868 T 11-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 syc1533_d 44e3b253bb0d9c877b3685f8d4087bf4 307 SUPERFAMILY SSF53697 9 253 3.11E-61 T 11-10-2018 syc1533_d 44e3b253bb0d9c877b3685f8d4087bf4 307 Gene3D G3DSA:1.10.8.1080 224 301 2.6E-22 T 11-10-2018 syc1533_d 44e3b253bb0d9c877b3685f8d4087bf4 307 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 190 207 - T 11-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 syc1533_d 44e3b253bb0d9c877b3685f8d4087bf4 307 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 11 300 1.0E-120 T 11-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 syc1533_d 44e3b253bb0d9c877b3685f8d4087bf4 307 Pfam PF13580 SIS domain 40 166 6.3E-8 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 syc2084_d 87d561d97a248e203c0c9ffc60a2461e 393 Hamap MF_01818 Ribonuclease BN [rbn]. 1 306 41.431 T 11-10-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 syc2084_d 87d561d97a248e203c0c9ffc60a2461e 393 Gene3D G3DSA:3.60.15.10 1 306 3.6E-110 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like syc2084_d 87d561d97a248e203c0c9ffc60a2461e 393 SUPERFAMILY SSF56281 2 305 2.67E-86 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like syc2084_d 87d561d97a248e203c0c9ffc60a2461e 393 Pfam PF12706 Beta-lactamase superfamily domain 200 269 6.2E-9 T 11-10-2018 IPR001279 Metallo-beta-lactamase syc2084_d 87d561d97a248e203c0c9ffc60a2461e 393 Pfam PF12706 Beta-lactamase superfamily domain 34 151 1.0E-9 T 11-10-2018 IPR001279 Metallo-beta-lactamase syc2084_d 87d561d97a248e203c0c9ffc60a2461e 393 SMART SM00849 18 268 0.0038 T 11-10-2018 IPR001279 Metallo-beta-lactamase syc2084_d 87d561d97a248e203c0c9ffc60a2461e 393 TIGRFAM TIGR02651 RNase_Z: ribonuclease Z 2 305 1.4E-113 T 11-10-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 syc1901_d 4d71029a5dfbc7ffc4dd244287709ba5 213 Pfam PF04773 FecR protein 56 145 9.2E-13 T 11-10-2018 IPR006860 FecR protein syc1436_d bb1ff7d6376f6193e1ac308b3b3a1847 269 Pfam PF12679 ABC-2 family transporter protein 15 203 2.8E-11 T 11-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 syc0033_d de44c93c65653bc47cf1a7f9e0ac896b 463 Pfam PF00654 Voltage gated chloride channel 85 427 2.1E-85 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 syc0033_d de44c93c65653bc47cf1a7f9e0ac896b 463 SUPERFAMILY SSF81340 15 444 8.89E-99 T 11-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 syc0033_d de44c93c65653bc47cf1a7f9e0ac896b 463 PRINTS PR00762 Chloride channel signature 378 394 2.7E-20 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 syc0033_d de44c93c65653bc47cf1a7f9e0ac896b 463 PRINTS PR00762 Chloride channel signature 177 196 2.7E-20 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 syc0033_d de44c93c65653bc47cf1a7f9e0ac896b 463 PRINTS PR00762 Chloride channel signature 97 114 2.7E-20 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 syc0033_d de44c93c65653bc47cf1a7f9e0ac896b 463 PRINTS PR00762 Chloride channel signature 396 415 2.7E-20 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 syc0033_d de44c93c65653bc47cf1a7f9e0ac896b 463 PRINTS PR00762 Chloride channel signature 343 363 2.7E-20 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 syc0033_d de44c93c65653bc47cf1a7f9e0ac896b 463 Gene3D G3DSA:1.10.3080.10 29 448 2.5E-115 T 11-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 syc0196_d a43b2e94ec9eb81f0ce43fcfb2c748fe 263 Pfam PF04434 SWIM zinc finger 117 141 2.0E-5 T 11-10-2018 IPR007527 Zinc finger, SWIM-type GO:0008270 syc0288_d b407776e4a2c94232db837203c61b774 290 Gene3D G3DSA:3.30.2130.30 1 88 1.1E-24 T 11-10-2018 syc0288_d b407776e4a2c94232db837203c61b774 290 SUPERFAMILY SSF53335 57 286 2.85E-41 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase syc0288_d b407776e4a2c94232db837203c61b774 290 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 111 122 - T 11-10-2018 IPR000241 Putative RNA methylase domain syc0288_d b407776e4a2c94232db837203c61b774 290 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 216 222 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 syc0288_d b407776e4a2c94232db837203c61b774 290 Pfam PF02926 THUMP domain 5 69 6.6E-7 T 11-10-2018 IPR004114 THUMP domain GO:0003723 syc0288_d b407776e4a2c94232db837203c61b774 290 Pfam PF01170 Putative RNA methylase family UPF0020 78 284 8.9E-54 T 11-10-2018 IPR000241 Putative RNA methylase domain syc1146_d 3539ef83e298ac191df641bd0fb0d2d6 307 Gene3D G3DSA:1.20.1530.20 2 290 5.1E-77 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily syc1146_d 3539ef83e298ac191df641bd0fb0d2d6 307 Pfam PF01758 Sodium Bile acid symporter family 12 196 2.3E-37 T 11-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 syc1992_c 24bce714803ef528c5711c3ba2bfad13 294 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 6 290 3.2E-153 T 11-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 syc1992_c 24bce714803ef528c5711c3ba2bfad13 294 Gene3D G3DSA:3.90.550.10 1 294 3.6E-85 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases syc1992_c 24bce714803ef528c5711c3ba2bfad13 294 SUPERFAMILY SSF53448 6 290 8.79E-90 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases syc1992_c 24bce714803ef528c5711c3ba2bfad13 294 Pfam PF00483 Nucleotidyl transferase 7 241 4.5E-68 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 syc0115_d 5d5a46b26ea4914af5c5982d65fae460 325 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 325 94.023 T 11-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 syc0115_d 5d5a46b26ea4914af5c5982d65fae460 325 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 9 316 5.0E-85 T 11-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 syc0115_d 5d5a46b26ea4914af5c5982d65fae460 325 Pfam PF03186 CobD/Cbib protein 13 304 3.9E-94 T 11-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 syc1005_d 5f058746e5edea94f2f5275969384a2c 140 Gene3D G3DSA:1.10.3450.10 3 111 1.3E-26 T 11-10-2018 syc1005_d 5f058746e5edea94f2f5275969384a2c 140 Pfam PF03745 Domain of unknown function (DUF309) 10 67 6.0E-25 T 11-10-2018 IPR005500 Protein of unknown function DUF309 syc1005_d 5f058746e5edea94f2f5275969384a2c 140 SUPERFAMILY SSF140663 5 113 1.7E-37 T 11-10-2018 IPR023203 TTHA0068-like superfamily syc2070_c 14abf862563c1e365f750ad2be1b2a6a 361 Gene3D G3DSA:3.40.50.2000 195 329 2.8E-30 T 11-10-2018 syc2070_c 14abf862563c1e365f750ad2be1b2a6a 361 Pfam PF00534 Glycosyl transferases group 1 187 328 1.0E-28 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 syc2070_c 14abf862563c1e365f750ad2be1b2a6a 361 SUPERFAMILY SSF53756 1 360 1.88E-61 T 11-10-2018 syc2070_c 14abf862563c1e365f750ad2be1b2a6a 361 Gene3D G3DSA:3.40.50.2000 1 194 4.0E-7 T 11-10-2018 syc2164_c bb16d0edd8ff9c819d09c4af02b0f975 247 Pfam PF09353 Domain of unknown function (DUF1995) 5 203 4.8E-57 T 11-10-2018 IPR018962 Domain of unknown function DUF1995 syc2230_c 2552650fd51091b715a7afe5a7c6e765 202 SUPERFAMILY SSF55821 6 174 1.1E-35 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily syc2230_c 2552650fd51091b715a7afe5a7c6e765 202 Pfam PF01300 Telomere recombination 13 158 3.6E-32 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 syc2230_c 2552650fd51091b715a7afe5a7c6e765 202 Gene3D G3DSA:3.90.870.10 3 183 5.1E-37 T 11-10-2018 syc0236_c 07496c90c19ec4f2fa972f6795a91183 245 Gene3D G3DSA:3.40.50.300 1 236 1.7E-58 T 11-10-2018 syc0236_c 07496c90c19ec4f2fa972f6795a91183 245 SUPERFAMILY SSF52540 1 213 3.59E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0236_c 07496c90c19ec4f2fa972f6795a91183 245 Pfam PF00005 ABC transporter 17 160 1.1E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 syc0236_c 07496c90c19ec4f2fa972f6795a91183 245 SMART SM00382 26 215 5.2E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain syc0236_c 07496c90c19ec4f2fa972f6795a91183 245 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 syc1826_c 0966688fad115ea58ed1f60ac8cc93fd 255 Pfam PF12705 PD-(D/E)XK nuclease superfamily 7 234 2.1E-22 T 11-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type syc1826_c 0966688fad115ea58ed1f60ac8cc93fd 255 Gene3D G3DSA:3.90.320.10 2 227 5.6E-5 T 11-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal syc0965_d 4fecf55a6b6572ff512d12f89bea6687 237 SUPERFAMILY SSF52172 1 185 2.4E-40 T 11-10-2018 IPR011006 CheY-like superfamily syc0965_d 4fecf55a6b6572ff512d12f89bea6687 237 Pfam PF00072 Response regulator receiver domain 6 108 1.5E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 syc0965_d 4fecf55a6b6572ff512d12f89bea6687 237 SMART SM00448 4 114 6.3E-39 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 syc0965_d 4fecf55a6b6572ff512d12f89bea6687 237 Gene3D G3DSA:3.40.50.2300 1 121 2.8E-33 T 11-10-2018 syc0965_d 4fecf55a6b6572ff512d12f89bea6687 237 Gene3D G3DSA:1.10.10.10 122 230 8.1E-36 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily syc0965_d 4fecf55a6b6572ff512d12f89bea6687 237 SMART SM00862 150 226 8.9E-27 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 syc0965_d 4fecf55a6b6572ff512d12f89bea6687 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 226 1.3E-25 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 syc2352_c de57e06f1be04d39aeac240eb19d7d56 57 Gene3D G3DSA:1.10.1660.10 1 57 3.4E-7 T 11-10-2018 syc0071_d 97771d04c4075a5524a3d8ffcc589fa2 45 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 3 40 3.0E-12 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc0071_d 97771d04c4075a5524a3d8ffcc589fa2 45 ProSitePatterns PS00784 Ribosomal protein L34 signature. 3 22 - T 11-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc0071_d 97771d04c4075a5524a3d8ffcc589fa2 45 Pfam PF00468 Ribosomal protein L34 2 45 4.7E-18 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc0071_d 97771d04c4075a5524a3d8ffcc589fa2 45 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 2 45 4.3E-19 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc0071_d 97771d04c4075a5524a3d8ffcc589fa2 45 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 2 45 16.721 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc2446_c 93387ab49781f6d9188d87446bd6c196 213 Gene3D G3DSA:3.40.50.300 1 212 9.6E-60 T 11-10-2018 syc2446_c 93387ab49781f6d9188d87446bd6c196 213 ProSitePatterns PS00211 ABC transporters family signature. 120 134 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 syc2446_c 93387ab49781f6d9188d87446bd6c196 213 Pfam PF00005 ABC transporter 15 148 1.2E-25 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 syc2446_c 93387ab49781f6d9188d87446bd6c196 213 SUPERFAMILY SSF52540 2 208 2.2E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc2446_c 93387ab49781f6d9188d87446bd6c196 213 SMART SM00382 24 196 7.0E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain syc1437_d 8e6ed047ab10198ddd8ebc4eaf0e35cd 504 Pfam PF09822 ABC-type uncharacterized transport system 92 315 1.2E-26 T 11-10-2018 IPR019196 ABC-type uncharacterised transport system Reactome: R-HSA-5610787|Reactome: R-HSA-5620924 syc1986_d b5344e12d626627ef76e11922daeb526 395 Pfam PF13379 NMT1-like family 31 269 9.1E-75 T 11-10-2018 syc1986_d b5344e12d626627ef76e11922daeb526 395 Gene3D G3DSA:3.40.190.10 122 382 7.0E-105 T 11-10-2018 syc1986_d b5344e12d626627ef76e11922daeb526 395 Gene3D G3DSA:3.40.190.10 36 377 7.0E-105 T 11-10-2018 syc1986_d b5344e12d626627ef76e11922daeb526 395 SUPERFAMILY SSF53850 32 263 1.75E-39 T 11-10-2018 syc0717_c 986ecf0d778a8396bc9be9e52e877f71 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 120 341 9.8E-39 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 syc0717_c 986ecf0d778a8396bc9be9e52e877f71 341 SUPERFAMILY SSF161098 98 328 3.6E-12 T 11-10-2018 IPR035906 MetI-like superfamily syc0669_d a63d534fe7d9fdf9632cf66c2520bfa7 84 Gene3D G3DSA:3.30.160.250 20 82 1.5E-9 T 11-10-2018 syc0669_d a63d534fe7d9fdf9632cf66c2520bfa7 84 SUPERFAMILY SSF143100 15 65 1.07E-11 T 11-10-2018 IPR035069 TTHA1013/TTHA0281-like syc0911_d 343cf29f83ec1831818852b1c4dcc6e9 162 SMART SM00855 2 115 1.1E-6 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 syc0911_d 343cf29f83ec1831818852b1c4dcc6e9 162 SUPERFAMILY SSF53254 1 145 8.64E-22 T 11-10-2018 IPR029033 Histidine phosphatase superfamily syc0911_d 343cf29f83ec1831818852b1c4dcc6e9 162 Gene3D G3DSA:3.40.50.1240 2 162 1.6E-37 T 11-10-2018 IPR029033 Histidine phosphatase superfamily syc0911_d 343cf29f83ec1831818852b1c4dcc6e9 162 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 80 1.7E-10 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 syc0911_d 343cf29f83ec1831818852b1c4dcc6e9 162 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 158 5.0E-32 T 11-10-2018 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0101006 syc0750_c afaaecf98fe001cdaa0f67b62e510ffc 292 Gene3D G3DSA:3.60.21.10 40 290 3.5E-53 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like syc0750_c afaaecf98fe001cdaa0f67b62e510ffc 292 PIRSF PIRSF000898 1 292 1.3E-74 T 11-10-2018 IPR024927 Purple acid phosphatase GO:0003993 KEGG: 00730+3.1.3.2|KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348|Reactome: R-HSA-196843 syc0750_c afaaecf98fe001cdaa0f67b62e510ffc 292 SUPERFAMILY SSF56300 44 287 6.61E-61 T 11-10-2018 syc0750_c afaaecf98fe001cdaa0f67b62e510ffc 292 Pfam PF00149 Calcineurin-like phosphoesterase 44 225 1.1E-19 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 syc2232_c ea341b8c99a1dd2952c363453ea3f437 339 Pfam PF04278 Tic22-like family 20 288 7.9E-18 T 11-10-2018 IPR007378 Tic22-like GO:0015031 syc2232_c ea341b8c99a1dd2952c363453ea3f437 339 Gene3D G3DSA:3.40.1350.100 63 299 1.6E-34 T 11-10-2018 syc1701_c fa60b929e8331e5c68638385cac614b5 246 Gene3D G3DSA:3.40.50.2020 78 232 5.8E-12 T 11-10-2018 syc1701_c fa60b929e8331e5c68638385cac614b5 246 SUPERFAMILY SSF53271 38 216 8.38E-20 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like syc0262_c 00c184046f2f5e22bb743559242f2727 122 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 61 79 - T 11-10-2018 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 syc0262_c 00c184046f2f5e22bb743559242f2727 122 SUPERFAMILY SSF46785 30 118 3.25E-27 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily syc0262_c 00c184046f2f5e22bb743559242f2727 122 Pfam PF01022 Bacterial regulatory protein, arsR family 45 91 1.1E-17 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 syc0262_c 00c184046f2f5e22bb743559242f2727 122 SMART SM00418 38 116 3.7E-34 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 syc0262_c 00c184046f2f5e22bb743559242f2727 122 Gene3D G3DSA:1.10.10.10 24 122 5.0E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily syc0262_c 00c184046f2f5e22bb743559242f2727 122 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 72 87 1.2E-18 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 syc0262_c 00c184046f2f5e22bb743559242f2727 122 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 59 70 1.2E-18 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 syc0262_c 00c184046f2f5e22bb743559242f2727 122 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 87 102 1.2E-18 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 syc0262_c 00c184046f2f5e22bb743559242f2727 122 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 55 1.2E-18 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 syc1007_d ac06cf5c9f8b1415e794215f53b0e773 242 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 4 241 9.2E-101 T 11-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 syc1007_d ac06cf5c9f8b1415e794215f53b0e773 242 Gene3D G3DSA:3.40.50.300 1 242 2.1E-66 T 11-10-2018 syc1007_d ac06cf5c9f8b1415e794215f53b0e773 242 SUPERFAMILY SSF52540 3 238 1.33E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc1007_d ac06cf5c9f8b1415e794215f53b0e773 242 SMART SM00382 27 230 4.4E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain syc1007_d ac06cf5c9f8b1415e794215f53b0e773 242 Pfam PF00005 ABC transporter 19 167 1.2E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 syc1470_c a84edcfc0175a04981fc17dd293e0a06 388 Gene3D G3DSA:3.40.640.10 62 289 2.6E-124 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 syc1470_c a84edcfc0175a04981fc17dd293e0a06 388 Pfam PF00155 Aminotransferase class I and II 45 382 6.3E-59 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 syc1470_c a84edcfc0175a04981fc17dd293e0a06 388 SUPERFAMILY SSF53383 12 385 5.17E-101 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase syc1470_c a84edcfc0175a04981fc17dd293e0a06 388 Gene3D G3DSA:3.90.1150.10 46 380 2.6E-124 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 syc1102_d 75787aa66ad0f4c0e8ccf1dc3888cb12 325 Gene3D G3DSA:2.160.20.80 191 322 8.6E-34 T 11-10-2018 syc1102_d 75787aa66ad0f4c0e8ccf1dc3888cb12 325 Pfam PF00805 Pentapeptide repeats (8 copies) 229 265 3.5E-10 T 11-10-2018 IPR001646 Pentapeptide repeat syc1102_d 75787aa66ad0f4c0e8ccf1dc3888cb12 325 Pfam PF00805 Pentapeptide repeats (8 copies) 269 300 1.3E-10 T 11-10-2018 IPR001646 Pentapeptide repeat syc1102_d 75787aa66ad0f4c0e8ccf1dc3888cb12 325 SUPERFAMILY SSF141571 194 302 3.66E-32 T 11-10-2018 syc0962_d bace1d20d85c5e3f0c01b6e8039fa7ea 234 SMART SM00382 38 214 4.0E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain syc0962_d bace1d20d85c5e3f0c01b6e8039fa7ea 234 Pfam PF00005 ABC transporter 29 167 1.2E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 syc0962_d bace1d20d85c5e3f0c01b6e8039fa7ea 234 Gene3D G3DSA:3.40.50.300 7 230 5.6E-52 T 11-10-2018 syc0962_d bace1d20d85c5e3f0c01b6e8039fa7ea 234 SUPERFAMILY SSF52540 12 215 7.67E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0962_d bace1d20d85c5e3f0c01b6e8039fa7ea 234 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 syc0094_c c3d23d846d0a5fbf99438cc389de4c68 546 Pfam PF04966 Carbohydrate-selective porin, OprB family 113 544 3.8E-40 T 11-10-2018 IPR007049 Carbohydrate-selective porin OprB GO:0008643|GO:0015288|GO:0016021 syc0094_c c3d23d846d0a5fbf99438cc389de4c68 546 Pfam PF00395 S-layer homology domain 54 96 5.3E-7 T 11-10-2018 IPR001119 S-layer homology domain syc0384_c d8fd8a44711cee821fe0fb8d7cd78414 441 Gene3D G3DSA:1.10.10.2600 119 236 2.0E-7 T 11-10-2018 IPR038109 DNA-binding recombinase domain superfamily syc0384_c d8fd8a44711cee821fe0fb8d7cd78414 441 SMART SM00857 3 132 5.5E-5 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 syc0384_c d8fd8a44711cee821fe0fb8d7cd78414 441 Pfam PF00239 Resolvase, N terminal domain 38 128 2.3E-7 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 syc0384_c d8fd8a44711cee821fe0fb8d7cd78414 441 SUPERFAMILY SSF53041 24 128 1.7E-10 T 11-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 syc0384_c d8fd8a44711cee821fe0fb8d7cd78414 441 Gene3D G3DSA:3.40.50.1390 21 118 3.5E-5 T 11-10-2018 syc0384_c d8fd8a44711cee821fe0fb8d7cd78414 441 Pfam PF07508 Recombinase 155 235 2.1E-4 T 11-10-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 syc0157_d 145a74861adaca5ecd2b7e16f1fe4c21 740 Pfam PF07238 PilZ domain 602 701 6.6E-12 T 11-10-2018 IPR009875 PilZ domain GO:0035438 syc0157_d 145a74861adaca5ecd2b7e16f1fe4c21 740 PRINTS PR01439 Cellulose synthase subunit A signature 496 515 4.1E-12 T 11-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 syc0157_d 145a74861adaca5ecd2b7e16f1fe4c21 740 PRINTS PR01439 Cellulose synthase subunit A signature 427 453 4.1E-12 T 11-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 syc0157_d 145a74861adaca5ecd2b7e16f1fe4c21 740 PRINTS PR01439 Cellulose synthase subunit A signature 186 205 4.1E-12 T 11-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 syc0157_d 145a74861adaca5ecd2b7e16f1fe4c21 740 PRINTS PR01439 Cellulose synthase subunit A signature 456 475 4.1E-12 T 11-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 syc0157_d 145a74861adaca5ecd2b7e16f1fe4c21 740 PRINTS PR01439 Cellulose synthase subunit A signature 99 119 4.1E-12 T 11-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 syc0157_d 145a74861adaca5ecd2b7e16f1fe4c21 740 PRINTS PR01439 Cellulose synthase subunit A signature 265 289 4.1E-12 T 11-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 syc0157_d 145a74861adaca5ecd2b7e16f1fe4c21 740 SUPERFAMILY SSF141371 602 701 1.04E-7 T 11-10-2018 syc0157_d 145a74861adaca5ecd2b7e16f1fe4c21 740 Gene3D G3DSA:3.90.550.10 168 385 1.4E-74 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases syc0157_d 145a74861adaca5ecd2b7e16f1fe4c21 740 Gene3D G3DSA:2.40.10.220 599 712 6.8E-7 T 11-10-2018 syc0157_d 145a74861adaca5ecd2b7e16f1fe4c21 740 SUPERFAMILY SSF53448 175 446 1.5E-46 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases syc0157_d 145a74861adaca5ecd2b7e16f1fe4c21 740 Pfam PF00535 Glycosyl transferase family 2 181 348 3.9E-30 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 syc1678_d 385a87a268fd35aef47e6032ccb0096a 148 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 133 1.9E-29 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 syc1678_d 385a87a268fd35aef47e6032ccb0096a 148 Gene3D G3DSA:3.30.420.270 61 129 9.8E-9 T 11-10-2018 syc2300_c 0169886b14657f860c827110f0d5e3f7 115 Pfam PF00085 Thioredoxin 14 114 1.6E-31 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 syc2300_c 0169886b14657f860c827110f0d5e3f7 115 Gene3D G3DSA:3.40.30.10 7 115 1.0E-32 T 11-10-2018 syc2300_c 0169886b14657f860c827110f0d5e3f7 115 SUPERFAMILY SSF52833 9 115 1.57E-35 T 11-10-2018 IPR036249 Thioredoxin-like superfamily syc2300_c 0169886b14657f860c827110f0d5e3f7 115 PRINTS PR00421 Thioredoxin family signature 31 39 2.4E-9 T 11-10-2018 syc2300_c 0169886b14657f860c827110f0d5e3f7 115 PRINTS PR00421 Thioredoxin family signature 79 90 2.4E-9 T 11-10-2018 syc2300_c 0169886b14657f860c827110f0d5e3f7 115 PRINTS PR00421 Thioredoxin family signature 39 48 2.4E-9 T 11-10-2018 syc2300_c 0169886b14657f860c827110f0d5e3f7 115 ProSitePatterns PS00194 Thioredoxin family active site. 32 50 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 syc2300_c 0169886b14657f860c827110f0d5e3f7 115 PIRSF PIRSF000077 9 115 2.5E-38 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 syc2300_c 0169886b14657f860c827110f0d5e3f7 115 TIGRFAM TIGR01068 thioredoxin: thioredoxin 16 114 1.7E-33 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 syc0300_d 254e664d809c5809be9fcdb9af3a200b 159 Pfam PF02507 Photosystem I reaction centre subunit III 48 150 1.5E-50 T 11-10-2018 IPR003666 Photosystem I PsaF, reaction centre subunit III GO:0009522|GO:0009538|GO:0015979 syc0300_d 254e664d809c5809be9fcdb9af3a200b 159 SUPERFAMILY SSF81536 24 159 1.44E-59 T 11-10-2018 IPR036577 Photosystem I PsaF, reaction centre subunit III superfamily GO:0009522|GO:0009538|GO:0015979 syc0300_d 254e664d809c5809be9fcdb9af3a200b 159 Gene3D G3DSA:1.10.8.110 24 159 1.4E-60 T 11-10-2018 IPR036577 Photosystem I PsaF, reaction centre subunit III superfamily GO:0009522|GO:0009538|GO:0015979 syc1879_d e55bcdbd2c60a61120e5cdd6e756c2ad 179 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 11-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc1879_d e55bcdbd2c60a61120e5cdd6e756c2ad 179 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 37.726 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 syc1879_d e55bcdbd2c60a61120e5cdd6e756c2ad 179 Gene3D G3DSA:3.90.930.12 83 179 1.7E-38 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc1879_d e55bcdbd2c60a61120e5cdd6e756c2ad 179 SUPERFAMILY SSF56053 2 82 4.84E-24 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc1879_d e55bcdbd2c60a61120e5cdd6e756c2ad 179 Gene3D G3DSA:3.90.930.12 1 82 1.3E-27 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc1879_d e55bcdbd2c60a61120e5cdd6e756c2ad 179 PRINTS PR00059 Ribosomal protein L6 signature 99 115 1.5E-32 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 syc1879_d e55bcdbd2c60a61120e5cdd6e756c2ad 179 PRINTS PR00059 Ribosomal protein L6 signature 71 96 1.5E-32 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 syc1879_d e55bcdbd2c60a61120e5cdd6e756c2ad 179 PRINTS PR00059 Ribosomal protein L6 signature 141 162 1.5E-32 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 syc1879_d e55bcdbd2c60a61120e5cdd6e756c2ad 179 PIRSF PIRSF002162 1 177 1.5E-46 T 11-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc1879_d e55bcdbd2c60a61120e5cdd6e756c2ad 179 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 3.5E-72 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 syc1879_d e55bcdbd2c60a61120e5cdd6e756c2ad 179 SUPERFAMILY SSF56053 83 177 2.62E-35 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc1879_d e55bcdbd2c60a61120e5cdd6e756c2ad 179 Pfam PF00347 Ribosomal protein L6 90 164 2.3E-18 T 11-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc1879_d e55bcdbd2c60a61120e5cdd6e756c2ad 179 Pfam PF00347 Ribosomal protein L6 11 81 6.4E-18 T 11-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc0842_c 534fe31026cecbc818cf07772e4aa378 539 Pfam PF11832 Protein of unknown function (DUF3352) 136 457 3.6E-30 T 11-10-2018 IPR021787 Protein of unknown function DUF3352 syc0140_d b425077730ab3820110e46b0a348f3c4 521 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 77 102 3.3E-7 T 11-10-2018 syc0140_d b425077730ab3820110e46b0a348f3c4 521 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 415 434 3.3E-7 T 11-10-2018 syc0140_d b425077730ab3820110e46b0a348f3c4 521 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 311 323 3.3E-7 T 11-10-2018 syc0140_d b425077730ab3820110e46b0a348f3c4 521 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 219 240 3.3E-7 T 11-10-2018 syc0140_d b425077730ab3820110e46b0a348f3c4 521 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 14 445 1.6E-125 T 11-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 syc0140_d b425077730ab3820110e46b0a348f3c4 521 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 10 483 17.625 T 11-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 syc0140_d b425077730ab3820110e46b0a348f3c4 521 Pfam PF00361 Proton-conducting membrane transporter 129 422 3.4E-80 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc2199_d e3d53c309f6fd928834cd3faed9ba33a 415 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 415 157.043 T 11-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 syc2199_d e3d53c309f6fd928834cd3faed9ba33a 415 Gene3D G3DSA:3.60.70.12 9 278 4.6E-101 T 11-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 syc2199_d e3d53c309f6fd928834cd3faed9ba33a 415 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 27 415 0.0 T 11-10-2018 syc2199_d e3d53c309f6fd928834cd3faed9ba33a 415 Pfam PF01960 ArgJ family 21 415 8.1E-154 T 11-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 syc2199_d e3d53c309f6fd928834cd3faed9ba33a 415 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 9 415 3.6E-167 T 11-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 syc2199_d e3d53c309f6fd928834cd3faed9ba33a 415 Gene3D G3DSA:3.10.20.340 279 415 4.8E-46 T 11-10-2018 syc2199_d e3d53c309f6fd928834cd3faed9ba33a 415 SUPERFAMILY SSF56266 16 412 3.66E-139 T 11-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 syc1688_d a87550dc94e042a65627a37657ee9c2b 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.8E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 syc1688_d a87550dc94e042a65627a37657ee9c2b 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.8E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 syc1688_d a87550dc94e042a65627a37657ee9c2b 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.8E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 syc1688_d a87550dc94e042a65627a37657ee9c2b 294 Pfam PF03466 LysR substrate binding domain 88 286 8.6E-36 T 11-10-2018 IPR005119 LysR, substrate-binding syc1688_d a87550dc94e042a65627a37657ee9c2b 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.9E-19 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 syc1688_d a87550dc94e042a65627a37657ee9c2b 294 Gene3D G3DSA:3.40.190.290 92 292 1.6E-35 T 11-10-2018 syc1688_d a87550dc94e042a65627a37657ee9c2b 294 Gene3D G3DSA:1.10.10.10 1 91 1.9E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily syc1688_d a87550dc94e042a65627a37657ee9c2b 294 SUPERFAMILY SSF46785 1 110 1.27E-24 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily syc1688_d a87550dc94e042a65627a37657ee9c2b 294 SUPERFAMILY SSF53850 90 290 1.49E-33 T 11-10-2018 syc1668_d 6a53a14ce8fc1231c513f7693e145212 477 Pfam PF07444 Ycf66 protein N-terminus 5 79 2.4E-17 T 11-10-2018 IPR010004 Uncharacterised protein family Ycf66 syc1691_d d49afbb8522836536bd71b9d836a754b 504 PIRSF PIRSF039101 2 504 7.3E-196 T 11-10-2018 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 syc1691_d d49afbb8522836536bd71b9d836a754b 504 Gene3D G3DSA:3.30.930.10 150 504 2.9E-130 T 11-10-2018 syc1691_d d49afbb8522836536bd71b9d836a754b 504 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 7 496 43.998 T 11-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 syc1691_d d49afbb8522836536bd71b9d836a754b 504 SUPERFAMILY SSF50249 2 147 3.86E-36 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold syc1691_d d49afbb8522836536bd71b9d836a754b 504 Pfam PF01336 OB-fold nucleic acid binding domain 53 137 5.5E-16 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 syc1691_d d49afbb8522836536bd71b9d836a754b 504 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 4 496 1.1E-210 T 11-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 syc1691_d d49afbb8522836536bd71b9d836a754b 504 PRINTS PR00982 Lysyl-tRNA synthetase signature 207 223 6.3E-39 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 syc1691_d d49afbb8522836536bd71b9d836a754b 504 PRINTS PR00982 Lysyl-tRNA synthetase signature 378 394 6.3E-39 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 syc1691_d d49afbb8522836536bd71b9d836a754b 504 PRINTS PR00982 Lysyl-tRNA synthetase signature 254 271 6.3E-39 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 syc1691_d d49afbb8522836536bd71b9d836a754b 504 PRINTS PR00982 Lysyl-tRNA synthetase signature 236 249 6.3E-39 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 syc1691_d d49afbb8522836536bd71b9d836a754b 504 PRINTS PR00982 Lysyl-tRNA synthetase signature 191 201 6.3E-39 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 syc1691_d d49afbb8522836536bd71b9d836a754b 504 Gene3D G3DSA:2.40.50.140 1 149 5.0E-41 T 11-10-2018 syc1691_d d49afbb8522836536bd71b9d836a754b 504 SUPERFAMILY SSF55681 154 494 4.02E-116 T 11-10-2018 syc1691_d d49afbb8522836536bd71b9d836a754b 504 Pfam PF00152 tRNA synthetases class II (D, K and N) 155 493 3.4E-82 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 syc2297_d 5cdb4234280deda856f5003e7e7169db 97 Gene3D G3DSA:3.30.70.1060 13 90 3.9E-6 T 11-10-2018 syc2297_d 5cdb4234280deda856f5003e7e7169db 97 Pfam PF03795 YCII-related domain 18 83 3.6E-7 T 11-10-2018 IPR005545 YCII-related syc2297_d 5cdb4234280deda856f5003e7e7169db 97 SUPERFAMILY SSF54909 1 86 1.64E-17 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel syc0427_c fec3a8e6a8ab6452be55f97b9ea3f16a 64 SUPERFAMILY SSF57829 3 64 7.32E-20 T 11-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 syc0427_c fec3a8e6a8ab6452be55f97b9ea3f16a 64 Pfam PF00471 Ribosomal protein L33 10 64 1.6E-24 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc0427_c fec3a8e6a8ab6452be55f97b9ea3f16a 64 ProSitePatterns PS00582 Ribosomal protein L33 signature. 32 51 - T 11-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc0427_c fec3a8e6a8ab6452be55f97b9ea3f16a 64 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 7 64 19.492 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc0427_c fec3a8e6a8ab6452be55f97b9ea3f16a 64 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 2 64 2.4E-25 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc0427_c fec3a8e6a8ab6452be55f97b9ea3f16a 64 Gene3D G3DSA:2.20.28.120 2 64 1.8E-30 T 11-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc0380_d a50e91cbc84395f48d1100a4a4a39ebe 160 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 4 159 36.639 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 syc0380_d a50e91cbc84395f48d1100a4a4a39ebe 160 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 5 159 1.6E-67 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 syc0380_d a50e91cbc84395f48d1100a4a4a39ebe 160 SUPERFAMILY SSF69765 4 159 1.05E-65 T 11-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 syc0380_d a50e91cbc84395f48d1100a4a4a39ebe 160 Pfam PF02542 YgbB family 4 157 1.1E-64 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 syc0380_d a50e91cbc84395f48d1100a4a4a39ebe 160 Gene3D G3DSA:3.30.1330.50 1 160 1.2E-67 T 11-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 syc0380_d a50e91cbc84395f48d1100a4a4a39ebe 160 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 38 53 - T 11-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 syc2228_d 0879dfd1f6b523264613e4de386a1360 139 SUPERFAMILY SSF160532 8 136 1.44E-38 T 11-10-2018 syc2228_d 0879dfd1f6b523264613e4de386a1360 139 Pfam PF08854 Domain of unknown function (DUF1824) 14 136 1.3E-36 T 11-10-2018 IPR014953 Protein of unknown function DUF1824 syc2228_d 0879dfd1f6b523264613e4de386a1360 139 Gene3D G3DSA:3.30.360.10 3 137 4.0E-40 T 11-10-2018 syc0792_c 89b54fcb9c501a5dfdaedb5fb3583435 114 SUPERFAMILY SSF160719 10 108 7.72E-27 T 11-10-2018 syc0792_c 89b54fcb9c501a5dfdaedb5fb3583435 114 Gene3D G3DSA:3.10.450.40 3 107 8.9E-20 T 11-10-2018 syc0792_c 89b54fcb9c501a5dfdaedb5fb3583435 114 Pfam PF04965 Gene 25-like lysozyme 17 85 1.2E-13 T 11-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD syc0419_c 25d130ff25b9eb0938e80606fa3aaf39 604 Gene3D G3DSA:3.60.40.10 231 512 3.5E-44 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 syc0419_c 25d130ff25b9eb0938e80606fa3aaf39 604 SMART SM00331 263 510 1.3E-4 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 syc0419_c 25d130ff25b9eb0938e80606fa3aaf39 604 SUPERFAMILY SSF81606 249 507 3.27E-40 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 syc0419_c 25d130ff25b9eb0938e80606fa3aaf39 604 SMART SM00332 246 508 1.5E-4 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 syc0419_c 25d130ff25b9eb0938e80606fa3aaf39 604 Pfam PF13672 Protein phosphatase 2C 262 461 7.3E-8 T 11-10-2018 syc1717_d aa31529c9430cae6f81e2a38601f2d0d 389 TIGRFAM TIGR03404 bicupin_oxalic: bicupin, oxalate decarboxylase family 46 385 7.1E-102 T 11-10-2018 IPR017774 Bicupin, oxalate decarboxylase/oxidase GO:0033609 KEGG: 00630+4.1.1.2|MetaCyc: PWY-6698 syc1717_d aa31529c9430cae6f81e2a38601f2d0d 389 Gene3D G3DSA:2.60.120.10 52 376 1.9E-132 T 11-10-2018 IPR014710 RmlC-like jelly roll fold syc1717_d aa31529c9430cae6f81e2a38601f2d0d 389 SMART SM00835 234 376 1.7E-36 T 11-10-2018 IPR006045 Cupin 1 GO:0045735 syc1717_d aa31529c9430cae6f81e2a38601f2d0d 389 SMART SM00835 54 196 3.8E-16 T 11-10-2018 IPR006045 Cupin 1 GO:0045735 syc1717_d aa31529c9430cae6f81e2a38601f2d0d 389 Pfam PF00190 Cupin 234 372 4.8E-26 T 11-10-2018 IPR006045 Cupin 1 GO:0045735 syc1717_d aa31529c9430cae6f81e2a38601f2d0d 389 Pfam PF00190 Cupin 54 195 1.3E-22 T 11-10-2018 IPR006045 Cupin 1 GO:0045735 syc1717_d aa31529c9430cae6f81e2a38601f2d0d 389 Gene3D G3DSA:2.60.120.10 58 235 1.9E-132 T 11-10-2018 IPR014710 RmlC-like jelly roll fold syc1717_d aa31529c9430cae6f81e2a38601f2d0d 389 SUPERFAMILY SSF51182 16 381 1.16E-83 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily syc1184_c 7ee3069beba9e9f4bf163463e3f8cd36 417 Pfam PF13847 Methyltransferase domain 74 179 8.6E-19 T 11-10-2018 IPR025714 Methyltransferase domain syc1184_c 7ee3069beba9e9f4bf163463e3f8cd36 417 SUPERFAMILY SSF53335 24 282 2.43E-38 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase syc1627_d 5ca2e1e2042f40da74ddd9beb1caeaff 298 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 293 5.0E-108 T 11-10-2018 IPR010099 Epimerase family protein SDR39U1 syc1627_d 5ca2e1e2042f40da74ddd9beb1caeaff 298 Pfam PF08338 Domain of unknown function (DUF1731) 250 295 1.6E-21 T 11-10-2018 IPR013549 Domain of unknown function DUF1731 syc1627_d 5ca2e1e2042f40da74ddd9beb1caeaff 298 Gene3D G3DSA:3.40.50.720 2 297 1.3E-81 T 11-10-2018 syc1627_d 5ca2e1e2042f40da74ddd9beb1caeaff 298 SUPERFAMILY SSF51735 2 296 3.19E-45 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily syc1627_d 5ca2e1e2042f40da74ddd9beb1caeaff 298 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 218 5.1E-17 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 syc1394_c bbf3b9c141e78fd9c2b548366835ab89 185 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 5 66 1.8E-11 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 syc1394_c bbf3b9c141e78fd9c2b548366835ab89 185 SUPERFAMILY SSF47413 4 65 8.59E-10 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 syc1394_c bbf3b9c141e78fd9c2b548366835ab89 185 SMART SM00530 4 61 4.4E-5 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 syc1394_c bbf3b9c141e78fd9c2b548366835ab89 185 Gene3D G3DSA:1.10.260.40 3 67 2.2E-7 T 11-10-2018 syc1140_d 7286e466aaf92719319b95cf8888d669 270 Pfam PF08007 Cupin superfamily protein 15 182 2.4E-20 T 11-10-2018 IPR003347 JmjC domain syc1140_d 7286e466aaf92719319b95cf8888d669 270 Gene3D G3DSA:2.60.120.650 1 190 6.1E-40 T 11-10-2018 syc1140_d 7286e466aaf92719319b95cf8888d669 270 SUPERFAMILY SSF51197 6 210 8.1E-34 T 11-10-2018 syc2467_c 80e66d1702ba84486b2025c4e738217a 217 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 7 205 9.6E-63 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 syc2467_c 80e66d1702ba84486b2025c4e738217a 217 SUPERFAMILY SSF52317 7 207 1.38E-57 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like syc2467_c 80e66d1702ba84486b2025c4e738217a 217 Pfam PF00117 Glutamine amidotransferase class-I 9 206 1.5E-19 T 11-10-2018 IPR017926 Glutamine amidotransferase syc2467_c 80e66d1702ba84486b2025c4e738217a 217 PIRSF PIRSF000495 5 210 1.4E-70 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 syc2467_c 80e66d1702ba84486b2025c4e738217a 217 Gene3D G3DSA:3.40.50.880 2 216 2.9E-74 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like syc2467_c 80e66d1702ba84486b2025c4e738217a 217 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 6 207 35.91 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 syc0661_c 6734c0f1b3263efd49b16b1c696bffc0 215 Gene3D G3DSA:3.30.420.10 14 214 2.8E-69 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 syc0661_c 6734c0f1b3263efd49b16b1c696bffc0 215 Hamap MF_00052_B Ribonuclease HII [rnhB]. 20 204 34.699 T 11-10-2018 IPR022898 Ribonuclease HII GO:0004523 syc0661_c 6734c0f1b3263efd49b16b1c696bffc0 215 Pfam PF01351 Ribonuclease HII 22 201 1.1E-43 T 11-10-2018 IPR024567 Ribonuclease HII/HIII domain syc0661_c 6734c0f1b3263efd49b16b1c696bffc0 215 SUPERFAMILY SSF53098 18 201 1.82E-61 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily syc1649_c 659eb4b439d79e4e5c75f758a40f9216 210 Pfam PF11237 Protein of unknown function (DUF3038) 39 207 6.5E-62 T 11-10-2018 IPR021399 Protein of unknown function DUF3038 syc0614_c 58cca87eb42fe1036b9ae8aaad7eb4b5 605 Gene3D G3DSA:2.40.160.50 245 605 7.5E-42 T 11-10-2018 syc0614_c 58cca87eb42fe1036b9ae8aaad7eb4b5 605 Pfam PF08479 POTRA domain, ShlB-type 80 153 4.3E-10 T 11-10-2018 IPR013686 Polypeptide-transport-associated, ShlB-type syc0614_c 58cca87eb42fe1036b9ae8aaad7eb4b5 605 Pfam PF07244 Surface antigen variable number repeat 180 241 2.1E-4 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 syc0614_c 58cca87eb42fe1036b9ae8aaad7eb4b5 605 Gene3D G3DSA:3.10.20.310 156 244 8.8E-21 T 11-10-2018 syc0614_c 58cca87eb42fe1036b9ae8aaad7eb4b5 605 Gene3D G3DSA:3.10.20.310 1 76 3.8E-18 T 11-10-2018 syc0614_c 58cca87eb42fe1036b9ae8aaad7eb4b5 605 Gene3D G3DSA:3.10.20.310 77 155 7.5E-22 T 11-10-2018 syc0614_c 58cca87eb42fe1036b9ae8aaad7eb4b5 605 Pfam PF01103 Surface antigen 269 605 2.8E-53 T 11-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 syc2358_d f2f96cd568440e0fafc9d036d750b23b 214 TIGRFAM TIGR02702 SufR_cyano: iron-sulfur cluster biosynthesis transcriptional regulator SufR 8 210 9.5E-109 T 11-10-2018 IPR014075 SUF system FeS cluster assembly, SufR regulator, cyanobacteria syc2358_d f2f96cd568440e0fafc9d036d750b23b 214 SUPERFAMILY SSF46785 9 192 2.33E-34 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily syc2358_d f2f96cd568440e0fafc9d036d750b23b 214 Pfam PF13412 Winged helix-turn-helix DNA-binding 9 53 6.4E-10 T 11-10-2018 syc2358_d f2f96cd568440e0fafc9d036d750b23b 214 Gene3D G3DSA:1.10.10.10 2 91 7.8E-12 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily syc2299_c c72c3d1403954194496e295099fb155d 372 Pfam PF00155 Aminotransferase class I and II 14 366 2.3E-46 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 syc2299_c c72c3d1403954194496e295099fb155d 372 Gene3D G3DSA:3.40.640.10 46 267 3.2E-101 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 syc2299_c c72c3d1403954194496e295099fb155d 372 Gene3D G3DSA:3.90.1150.10 15 366 3.2E-101 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 syc2299_c c72c3d1403954194496e295099fb155d 372 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 218 231 - T 11-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 syc2299_c c72c3d1403954194496e295099fb155d 372 SUPERFAMILY SSF53383 5 371 6.12E-91 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase syc1614_d 99111d6fe63aa8396edbdb6ab985e7c7 237 SMART SM00382 30 217 1.9E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain syc1614_d 99111d6fe63aa8396edbdb6ab985e7c7 237 Gene3D G3DSA:3.40.50.300 1 237 5.9E-62 T 11-10-2018 syc1614_d 99111d6fe63aa8396edbdb6ab985e7c7 237 SUPERFAMILY SSF52540 4 236 2.27E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc1614_d 99111d6fe63aa8396edbdb6ab985e7c7 237 PIRSF PIRSF039137 1 237 6.1E-104 T 11-10-2018 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 syc1614_d 99111d6fe63aa8396edbdb6ab985e7c7 237 Pfam PF00005 ABC transporter 21 166 2.5E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 syc1614_d 99111d6fe63aa8396edbdb6ab985e7c7 237 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 syc1968_d 850e3f01146ce45d205dc5a8e9b7e2b4 323 PRINTS PR01270 Histone deacetylase superfamily signature 247 257 9.5E-14 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 syc1968_d 850e3f01146ce45d205dc5a8e9b7e2b4 323 PRINTS PR01270 Histone deacetylase superfamily signature 133 156 9.5E-14 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 syc1968_d 850e3f01146ce45d205dc5a8e9b7e2b4 323 PRINTS PR01270 Histone deacetylase superfamily signature 166 181 9.5E-14 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 syc1968_d 850e3f01146ce45d205dc5a8e9b7e2b4 323 Pfam PF00850 Histone deacetylase domain 28 311 1.0E-70 T 11-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 syc1968_d 850e3f01146ce45d205dc5a8e9b7e2b4 323 Gene3D G3DSA:3.40.800.20 7 322 9.5E-98 T 11-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 syc1968_d 850e3f01146ce45d205dc5a8e9b7e2b4 323 SUPERFAMILY SSF52768 9 315 1.2E-94 T 11-10-2018 IPR023696 Ureohydrolase domain superfamily syc2049_d 875bea3b2da3d20d386c74b34b8415db 337 Pfam PF05239 PRC-barrel domain 9 79 1.9E-6 T 11-10-2018 IPR027275 PRC-barrel domain syc2049_d 875bea3b2da3d20d386c74b34b8415db 337 Pfam PF05239 PRC-barrel domain 87 166 6.9E-10 T 11-10-2018 IPR027275 PRC-barrel domain syc2049_d 875bea3b2da3d20d386c74b34b8415db 337 SUPERFAMILY SSF50346 6 78 8.16E-10 T 11-10-2018 IPR011033 PRC-barrel-like superfamily syc2049_d 875bea3b2da3d20d386c74b34b8415db 337 SUPERFAMILY SSF50346 91 163 5.97E-10 T 11-10-2018 IPR011033 PRC-barrel-like superfamily syc0417_d 9bb8b3c5af5849aa86c8a8871c06ce17 567 Gene3D G3DSA:1.10.287.470 258 355 1.7E-7 T 11-10-2018 syc0417_d 9bb8b3c5af5849aa86c8a8871c06ce17 567 Pfam PF13437 HlyD family secretion protein 413 527 5.1E-17 T 11-10-2018 syc0417_d 9bb8b3c5af5849aa86c8a8871c06ce17 567 Gene3D G3DSA:2.40.50.100 224 257 1.7E-7 T 11-10-2018 syc0417_d 9bb8b3c5af5849aa86c8a8871c06ce17 567 SUPERFAMILY SSF48452 18 93 6.07E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc0417_d 9bb8b3c5af5849aa86c8a8871c06ce17 567 Gene3D G3DSA:2.40.30.170 431 556 2.1E-10 T 11-10-2018 syc0417_d 9bb8b3c5af5849aa86c8a8871c06ce17 567 Gene3D G3DSA:1.25.40.10 1 143 1.2E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc0417_d 9bb8b3c5af5849aa86c8a8871c06ce17 567 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 537 552 2.7E-10 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 syc0417_d 9bb8b3c5af5849aa86c8a8871c06ce17 567 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 236 256 2.7E-10 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 syc0417_d 9bb8b3c5af5849aa86c8a8871c06ce17 567 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 426 447 2.7E-10 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 syc0417_d 9bb8b3c5af5849aa86c8a8871c06ce17 567 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 459 483 2.7E-10 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 syc0417_d 9bb8b3c5af5849aa86c8a8871c06ce17 567 Pfam PF13533 Biotin-lipoyl like 227 273 5.5E-6 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain syc1067_c ccaaa2beff3d022e9f5e851a5093bcd8 209 SUPERFAMILY SSF53474 5 200 1.16E-34 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold syc1067_c ccaaa2beff3d022e9f5e851a5093bcd8 209 Pfam PF02230 Phospholipase/Carboxylesterase 11 198 3.5E-21 T 11-10-2018 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 syc1067_c ccaaa2beff3d022e9f5e851a5093bcd8 209 Gene3D G3DSA:3.40.50.1820 9 198 1.3E-36 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold syc0712_d 11d0a5ec4753151746f224ec98fad18c 348 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 5 212 1.4E-57 T 11-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain syc0712_d 11d0a5ec4753151746f224ec98fad18c 348 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 255 344 2.3E-19 T 11-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal syc0712_d 11d0a5ec4753151746f224ec98fad18c 348 Gene3D G3DSA:3.40.50.300 1 230 9.1E-61 T 11-10-2018 syc0712_d 11d0a5ec4753151746f224ec98fad18c 348 SUPERFAMILY SSF90002 254 344 2.09E-22 T 11-10-2018 syc0712_d 11d0a5ec4753151746f224ec98fad18c 348 TIGRFAM TIGR02475 CobW: cobalamin biosynthesis protein CobW 2 341 2.4E-149 T 11-10-2018 IPR012824 Cobalamin (vitamin B12) biosynthesis CobW GO:0009236 syc0712_d 11d0a5ec4753151746f224ec98fad18c 348 SUPERFAMILY SSF52540 3 244 1.95E-31 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0712_d 11d0a5ec4753151746f224ec98fad18c 348 SMART SM00833 254 346 2.4E-9 T 11-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal syc0712_d 11d0a5ec4753151746f224ec98fad18c 348 Gene3D G3DSA:3.30.1220.10 231 346 1.3E-25 T 11-10-2018 IPR036627 CobW-like, C-terminal domain superfamily syc0338_d 0f6a8491bf0565979e8b1cb588fc1e4d 86 Pfam PF13711 Domain of unknown function (DUF4160) 9 71 1.1E-22 T 11-10-2018 IPR025427 Protein of unknown function DUF4160 syc2139_c f0301b35c73953d35fef0c1d0629f5b3 305 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 255 264 4.9E-43 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 syc2139_c f0301b35c73953d35fef0c1d0629f5b3 305 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 167 185 4.9E-43 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 syc2139_c f0301b35c73953d35fef0c1d0629f5b3 305 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 133 147 4.9E-43 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 syc2139_c f0301b35c73953d35fef0c1d0629f5b3 305 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 204 221 4.9E-43 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 syc2139_c f0301b35c73953d35fef0c1d0629f5b3 305 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 233 244 4.9E-43 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 syc2139_c f0301b35c73953d35fef0c1d0629f5b3 305 Pfam PF01039 Carboxyl transferase domain 98 246 3.2E-19 T 11-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 syc2139_c f0301b35c73953d35fef0c1d0629f5b3 305 SUPERFAMILY SSF52096 29 287 3.32E-83 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily syc2139_c f0301b35c73953d35fef0c1d0629f5b3 305 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 4 285 40.293 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 syc2139_c f0301b35c73953d35fef0c1d0629f5b3 305 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 287 7.4E-136 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 syc2139_c f0301b35c73953d35fef0c1d0629f5b3 305 Gene3D G3DSA:3.90.226.10 29 288 1.3E-89 T 11-10-2018 syc0462_c 3e8dbfb75001c172b471f9622ebdefa6 324 SUPERFAMILY SSF51735 3 288 1.62E-37 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily syc0462_c 3e8dbfb75001c172b471f9622ebdefa6 324 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 230 3.0E-19 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 syc0462_c 3e8dbfb75001c172b471f9622ebdefa6 324 Gene3D G3DSA:3.40.50.720 2 280 4.4E-32 T 11-10-2018 syc0700_d 41059a2590e47f3beb9ea6b0c60b3def 160 TIGRFAM TIGR04044 MSMEG_0572_fam: MSMEG_0572 family protein 2 160 2.2E-83 T 11-10-2018 IPR023847 Conserved hypothetical protein CHP04044, MSMEG0572 syc0700_d 41059a2590e47f3beb9ea6b0c60b3def 160 SUPERFAMILY SSF75169 33 145 5.1E-11 T 11-10-2018 IPR027396 DsrEFH-like syc0700_d 41059a2590e47f3beb9ea6b0c60b3def 160 Gene3D G3DSA:3.40.1260.10 44 149 1.3E-6 T 11-10-2018 IPR027396 DsrEFH-like syc1096_d a0506ddd935fe03c3604c17347770cc4 133 Gene3D G3DSA:1.20.120.550 2 133 2.9E-45 T 11-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily syc1096_d a0506ddd935fe03c3604c17347770cc4 133 SUPERFAMILY SSF161084 5 129 2.09E-43 T 11-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily syc1096_d a0506ddd935fe03c3604c17347770cc4 133 Pfam PF01124 MAPEG family 7 121 5.0E-22 T 11-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein syc1936_c cc140ace22dda38e6ec8c8566e2116ca 169 Gene3D G3DSA:1.10.490.20 1 159 1.2E-53 T 11-10-2018 IPR038719 Phycobilisome, alpha/beta subunit superfamily syc1936_c cc140ace22dda38e6ec8c8566e2116ca 169 PIRSF PIRSF000081 1 168 4.5E-63 T 11-10-2018 IPR012128 Phycobilisome, alpha/beta subunit GO:0015979|GO:0030089 syc1936_c cc140ace22dda38e6ec8c8566e2116ca 169 Pfam PF00502 Phycobilisome protein 8 163 3.6E-56 T 11-10-2018 IPR012128 Phycobilisome, alpha/beta subunit GO:0015979|GO:0030089 syc1936_c cc140ace22dda38e6ec8c8566e2116ca 169 SUPERFAMILY SSF46458 1 164 2.51E-53 T 11-10-2018 IPR009050 Globin-like superfamily syc1936_c cc140ace22dda38e6ec8c8566e2116ca 169 TIGRFAM TIGR01337 apcB: allophycocyanin, beta subunit 2 169 1.9E-72 T 11-10-2018 IPR006245 Allophycocyanin, beta subunit GO:0015979|GO:0030089 syc0437_d 8a52002e9b010d4c87385918dbcef0df 313 Gene3D G3DSA:3.30.2350.10 82 310 3.9E-71 T 11-10-2018 syc0437_d 8a52002e9b010d4c87385918dbcef0df 313 Pfam PF00849 RNA pseudouridylate synthase 89 247 2.7E-30 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 syc0437_d 8a52002e9b010d4c87385918dbcef0df 313 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 14 307 5.5E-91 T 11-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 syc0437_d 8a52002e9b010d4c87385918dbcef0df 313 Pfam PF01479 S4 domain 15 61 2.8E-7 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc0437_d 8a52002e9b010d4c87385918dbcef0df 313 SUPERFAMILY SSF55120 75 307 5.52E-72 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 syc0437_d 8a52002e9b010d4c87385918dbcef0df 313 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 136 150 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 syc0437_d 8a52002e9b010d4c87385918dbcef0df 313 SMART SM00363 15 80 3.7E-6 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc0437_d 8a52002e9b010d4c87385918dbcef0df 313 Gene3D G3DSA:3.10.290.10 10 70 1.9E-14 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 syc0437_d 8a52002e9b010d4c87385918dbcef0df 313 SUPERFAMILY SSF55174 14 102 6.92E-11 T 11-10-2018 syc1225_c 709ee562a7fd2983880c2a1b00a6800a 152 Pfam PF07885 Ion channel 67 140 1.0E-16 T 11-10-2018 IPR013099 Potassium channel domain syc1225_c 709ee562a7fd2983880c2a1b00a6800a 152 PRINTS PR00169 Potassium channel signature 25 51 7.4E-10 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 syc1225_c 709ee562a7fd2983880c2a1b00a6800a 152 PRINTS PR00169 Potassium channel signature 86 108 7.4E-10 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 syc1225_c 709ee562a7fd2983880c2a1b00a6800a 152 PRINTS PR00169 Potassium channel signature 115 141 7.4E-10 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 syc1225_c 709ee562a7fd2983880c2a1b00a6800a 152 PRINTS PR00169 Potassium channel signature 54 77 7.4E-10 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 syc1225_c 709ee562a7fd2983880c2a1b00a6800a 152 SUPERFAMILY SSF81324 15 141 2.49E-29 T 11-10-2018 syc1225_c 709ee562a7fd2983880c2a1b00a6800a 152 Gene3D G3DSA:1.10.287.70 5 143 2.9E-35 T 11-10-2018 syc0205_d d78edcc243ee73a3d0cefd8813eaefe4 228 Gene3D G3DSA:3.40.50.1820 2 212 1.9E-38 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold syc0205_d d78edcc243ee73a3d0cefd8813eaefe4 228 Pfam PF05728 Uncharacterised protein family (UPF0227) 4 203 2.7E-37 T 11-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA syc0205_d d78edcc243ee73a3d0cefd8813eaefe4 228 SUPERFAMILY SSF53474 5 208 9.62E-25 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold syc1803_d 0c26771e5134afe850364e4e2609375e 397 Gene3D G3DSA:3.20.20.70 2 331 3.8E-134 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 syc1803_d 0c26771e5134afe850364e4e2609375e 397 ProSitePatterns PS01054 Transaldolase signature 1. 32 40 - T 11-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 syc1803_d 0c26771e5134afe850364e4e2609375e 397 Gene3D G3DSA:1.10.238.10 332 389 1.0E-8 T 11-10-2018 syc1803_d 0c26771e5134afe850364e4e2609375e 397 ProSitePatterns PS00018 EF-hand calcium-binding domain. 367 379 - T 11-10-2018 IPR018247 EF-Hand 1, calcium-binding site syc1803_d 0c26771e5134afe850364e4e2609375e 397 Pfam PF13202 EF hand 361 379 0.0016 T 11-10-2018 IPR002048 EF-hand domain GO:0005509 syc1803_d 0c26771e5134afe850364e4e2609375e 397 Pfam PF13202 EF hand 339 356 4.0E-4 T 11-10-2018 IPR002048 EF-hand domain GO:0005509 syc1803_d 0c26771e5134afe850364e4e2609375e 397 SUPERFAMILY SSF47473 334 382 9.5E-10 T 11-10-2018 IPR011992 EF-hand domain pair syc1803_d 0c26771e5134afe850364e4e2609375e 397 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 15 317 3.4E-96 T 11-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 syc1803_d 0c26771e5134afe850364e4e2609375e 397 Hamap MF_00492 Transaldolase [tal]. 3 323 49.583 T 11-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 syc1803_d 0c26771e5134afe850364e4e2609375e 397 SUPERFAMILY SSF51569 4 322 1.15E-112 T 11-10-2018 syc1803_d 0c26771e5134afe850364e4e2609375e 397 TIGRFAM TIGR00874 talAB: transaldolase 4 323 1.1E-142 T 11-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 syc1803_d 0c26771e5134afe850364e4e2609375e 397 ProSitePatterns PS00958 Transaldolase active site. 133 150 - T 11-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 syc0576_d a111c7f7a2d54397f8352a9df920708b 195 SUPERFAMILY SSF69635 3 121 1.33E-19 T 11-10-2018 syc2496_c e95f16a2ec9c425b4fda540c6d59ae3b 145 SUPERFAMILY SSF55961 7 143 4.97E-28 T 11-10-2018 syc2496_c e95f16a2ec9c425b4fda540c6d59ae3b 145 Gene3D G3DSA:3.30.530.20 6 144 1.3E-36 T 11-10-2018 IPR023393 START-like domain superfamily syc2496_c e95f16a2ec9c425b4fda540c6d59ae3b 145 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 13 133 1.1E-16 T 11-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 syc1965_c c552ba284975c558537406b86038bbfb 64 Gene3D G3DSA:1.10.287.670 6 64 3.1E-34 T 11-10-2018 IPR036904 Phycobilisome degradation protein NblA superfamily syc1965_c c552ba284975c558537406b86038bbfb 64 Pfam PF04485 Phycobilisome degradation protein nblA 14 62 5.1E-19 T 11-10-2018 IPR007574 Phycobilisome degradation protein NblA syc1965_c c552ba284975c558537406b86038bbfb 64 SUPERFAMILY SSF109859 13 63 6.41E-17 T 11-10-2018 IPR036904 Phycobilisome degradation protein NblA superfamily syc2178_d 3a177c6abd81f85315021556799f5e76 270 SUPERFAMILY SSF52096 2 208 1.08E-39 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily syc2178_d 3a177c6abd81f85315021556799f5e76 270 Gene3D G3DSA:3.90.226.10 15 213 5.7E-68 T 11-10-2018 syc2178_d 3a177c6abd81f85315021556799f5e76 270 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 12 219 1.7E-80 T 11-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 syc2178_d 3a177c6abd81f85315021556799f5e76 270 Pfam PF01343 Peptidase family S49 72 221 4.8E-56 T 11-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 syc2178_d 3a177c6abd81f85315021556799f5e76 270 Gene3D G3DSA:3.40.1750.20 111 177 5.7E-68 T 11-10-2018 syc1059_d a4f6cdc13725f2314dfee9d1d54f2eb1 369 Pfam PF00107 Zinc-binding dehydrogenase 197 320 8.6E-24 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 syc1059_d a4f6cdc13725f2314dfee9d1d54f2eb1 369 SUPERFAMILY SSF50129 1 185 4.41E-73 T 11-10-2018 IPR011032 GroES-like superfamily syc1059_d a4f6cdc13725f2314dfee9d1d54f2eb1 369 Gene3D G3DSA:3.40.50.720 174 312 2.5E-152 T 11-10-2018 syc1059_d a4f6cdc13725f2314dfee9d1d54f2eb1 369 Gene3D G3DSA:3.90.180.10 6 364 2.5E-152 T 11-10-2018 syc1059_d a4f6cdc13725f2314dfee9d1d54f2eb1 369 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 2 369 3.9E-228 T 11-10-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 syc1059_d a4f6cdc13725f2314dfee9d1d54f2eb1 369 SUPERFAMILY SSF51735 161 334 8.08E-47 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily syc1059_d a4f6cdc13725f2314dfee9d1d54f2eb1 369 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 153 4.3E-26 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 syc1059_d a4f6cdc13725f2314dfee9d1d54f2eb1 369 SUPERFAMILY SSF50129 318 369 1.46E-11 T 11-10-2018 IPR011032 GroES-like superfamily syc1059_d a4f6cdc13725f2314dfee9d1d54f2eb1 369 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 11-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 syc0871_d 64457d297408cba9083e9cee35efef89 113 Pfam PF08844 Domain of unknown function (DUF1815) 2 100 2.2E-52 T 11-10-2018 IPR014943 Protein of unknown function DUF1815 syc0822_c 643a1cb8b34da49500ece31b0ac531f0 583 SUPERFAMILY SSF56112 114 335 5.88E-26 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily syc0822_c 643a1cb8b34da49500ece31b0ac531f0 583 Pfam PF03109 ABC1 family 131 250 2.2E-36 T 11-10-2018 IPR004147 UbiB domain syc2241_c 237649f51ece2f12050f4b27ef6081e4 234 PIRSF PIRSF036427 3 234 4.1E-71 T 11-10-2018 IPR012382 Precorrin-2 C(20)-methyltransferase GO:0008757|GO:0009236|GO:0030788 syc2241_c 237649f51ece2f12050f4b27ef6081e4 234 Gene3D G3DSA:3.30.950.10 129 234 7.4E-14 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 syc2241_c 237649f51ece2f12050f4b27ef6081e4 234 Gene3D G3DSA:3.40.1010.10 1 127 2.6E-33 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 syc2241_c 237649f51ece2f12050f4b27ef6081e4 234 TIGRFAM TIGR01467 cobI_cbiL: precorrin-2 C(20)-methyltransferase 5 228 2.9E-66 T 11-10-2018 IPR006364 Precorrin-2 C(20)-methyltransferase domain GO:0008757|GO:0009236 syc2241_c 237649f51ece2f12050f4b27ef6081e4 234 SUPERFAMILY SSF53790 4 230 1.22E-48 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 syc2241_c 237649f51ece2f12050f4b27ef6081e4 234 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 6 210 5.5E-48 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 syc0158_c f694a7cab9c2f0cc7001c06b31b10927 456 Gene3D G3DSA:1.20.120.20 275 420 1.5E-8 T 11-10-2018 syc0158_c f694a7cab9c2f0cc7001c06b31b10927 456 Gene3D G3DSA:1.20.120.20 159 274 1.0E-9 T 11-10-2018 syc0158_c f694a7cab9c2f0cc7001c06b31b10927 456 SUPERFAMILY SSF58113 145 317 2.62E-11 T 11-10-2018 syc0450_d 11643c95bf0c043eac8c2d88b67aa2f4 233 Hamap MF_01982 2-phytyl-1,4-naphtoquinone methyltransferase [menG]. 8 233 50.386 T 11-10-2018 IPR032904 2-phytyl-1,4-naphtoquinone methyltransferase MenG GO:0042372|GO:0052624 MetaCyc: PWY-5027 syc0450_d 11643c95bf0c043eac8c2d88b67aa2f4 233 Gene3D G3DSA:3.40.50.150 15 231 3.0E-54 T 11-10-2018 syc0450_d 11643c95bf0c043eac8c2d88b67aa2f4 233 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 9 231 2.9E-65 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 syc0450_d 11643c95bf0c043eac8c2d88b67aa2f4 233 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 5 233 31.438 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 syc0450_d 11643c95bf0c043eac8c2d88b67aa2f4 233 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 20 35 - T 11-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 syc0450_d 11643c95bf0c043eac8c2d88b67aa2f4 233 Pfam PF01209 ubiE/COQ5 methyltransferase family 5 227 7.2E-55 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 syc0450_d 11643c95bf0c043eac8c2d88b67aa2f4 233 SUPERFAMILY SSF53335 6 222 1.38E-41 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase syc0763_d a11d5deb7a4725c75685bc40e1275312 210 SUPERFAMILY SSF55729 81 200 1.01E-23 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase syc0763_d a11d5deb7a4725c75685bc40e1275312 210 Pfam PF00583 Acetyltransferase (GNAT) family 85 195 2.9E-14 T 11-10-2018 IPR000182 GNAT domain syc0763_d a11d5deb7a4725c75685bc40e1275312 210 Gene3D G3DSA:3.40.630.30 77 208 1.1E-33 T 11-10-2018 syc0899_c 6bb950f10aa552dca54fc638c3b52840 588 SUPERFAMILY SSF82708 541 587 4.9E-9 T 11-10-2018 IPR036867 R3H domain superfamily GO:0003676 syc0899_c 6bb950f10aa552dca54fc638c3b52840 588 Gene3D G3DSA:3.40.50.300 130 307 2.1E-21 T 11-10-2018 syc0899_c 6bb950f10aa552dca54fc638c3b52840 588 SUPERFAMILY SSF52540 37 286 3.43E-16 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0899_c 6bb950f10aa552dca54fc638c3b52840 588 Pfam PF01424 R3H domain 531 586 1.6E-9 T 11-10-2018 IPR001374 R3H domain GO:0003676 syc0899_c 6bb950f10aa552dca54fc638c3b52840 588 SMART SM00393 510 588 1.8E-18 T 11-10-2018 IPR001374 R3H domain GO:0003676 syc0899_c 6bb950f10aa552dca54fc638c3b52840 588 SMART SM00382 141 297 3.5E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain syc1453_c 76f9edfcc0f02eb43a5e45e0fb110ff4 447 Gene3D G3DSA:3.40.50.150 40 276 2.6E-25 T 11-10-2018 syc1453_c 76f9edfcc0f02eb43a5e45e0fb110ff4 447 SUPERFAMILY SSF53335 53 266 3.73E-28 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase syc1453_c 76f9edfcc0f02eb43a5e45e0fb110ff4 447 Pfam PF13847 Methyltransferase domain 59 180 9.5E-25 T 11-10-2018 IPR025714 Methyltransferase domain syc1163_c cc514780fc57003af075507164639ae9 292 SUPERFAMILY SSF52540 36 270 5.8E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc1163_c cc514780fc57003af075507164639ae9 292 SMART SM00382 63 258 6.5E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain syc1163_c cc514780fc57003af075507164639ae9 292 ProSitePatterns PS00211 ABC transporters family signature. 173 187 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 syc1163_c cc514780fc57003af075507164639ae9 292 Pfam PF00005 ABC transporter 54 208 2.3E-25 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 syc1163_c cc514780fc57003af075507164639ae9 292 Gene3D G3DSA:3.40.50.300 36 286 2.0E-59 T 11-10-2018 syc1262_c 16317fb66265b6d99de271b83d5ebb6f 256 Pfam PF00929 Exonuclease 24 180 7.4E-20 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III syc1262_c 16317fb66265b6d99de271b83d5ebb6f 256 Gene3D G3DSA:3.30.420.10 16 193 9.6E-39 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 syc1262_c 16317fb66265b6d99de271b83d5ebb6f 256 SUPERFAMILY SSF53098 16 200 8.32E-44 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily syc1262_c 16317fb66265b6d99de271b83d5ebb6f 256 SMART SM00479 21 190 1.1E-22 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III syc0670_d a232f9414b52d54970162c0ee1dc88ad 75 Gene3D G3DSA:3.30.920.30 5 73 1.9E-19 T 11-10-2018 IPR038570 HicA superfamily syc0670_d a232f9414b52d54970162c0ee1dc88ad 75 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 9 65 6.8E-21 T 11-10-2018 IPR012933 HicA mRNA interferase family GO:0003729 syc0670_d a232f9414b52d54970162c0ee1dc88ad 75 SUPERFAMILY SSF54786 4 73 7.06E-18 T 11-10-2018 syc0765_d 88b07a7cd270ab9fe66d274c38464524 404 Gene3D G3DSA:3.40.30.10 41 124 2.4E-20 T 11-10-2018 syc0765_d 88b07a7cd270ab9fe66d274c38464524 404 SUPERFAMILY SSF52833 44 152 6.77E-23 T 11-10-2018 IPR036249 Thioredoxin-like superfamily syc0765_d 88b07a7cd270ab9fe66d274c38464524 404 Pfam PF13410 Glutathione S-transferase, C-terminal domain 165 230 9.9E-7 T 11-10-2018 syc0765_d 88b07a7cd270ab9fe66d274c38464524 404 SUPERFAMILY SSF47616 134 258 1.46E-12 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily syc0765_d 88b07a7cd270ab9fe66d274c38464524 404 Gene3D G3DSA:1.20.1050.10 152 254 1.3E-18 T 11-10-2018 syc0765_d 88b07a7cd270ab9fe66d274c38464524 404 Pfam PF13417 Glutathione S-transferase, N-terminal domain 54 122 2.2E-16 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 syc0298_c f9314bb5793f1201a775e82ff4eea5ff 425 Pfam PF00149 Calcineurin-like phosphoesterase 3 219 1.1E-14 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 syc0298_c f9314bb5793f1201a775e82ff4eea5ff 425 Gene3D G3DSA:3.60.21.10 2 263 1.4E-39 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like syc0298_c f9314bb5793f1201a775e82ff4eea5ff 425 SUPERFAMILY SSF56300 1 266 2.78E-41 T 11-10-2018 syc0316_c 70a21fa66c37de11db1b6e0880b1c096 174 Gene3D G3DSA:1.20.120.1630 8 174 3.3E-26 T 11-10-2018 syc0316_c 70a21fa66c37de11db1b6e0880b1c096 174 Pfam PF04191 Phospholipid methyltransferase 59 158 9.4E-12 T 11-10-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 syc2247_d 43ffbc2d318eb4177f26cd5cd66b425e 299 PIRSF PIRSF001365 5 299 1.1E-90 T 11-10-2018 IPR002220 DapA-like GO:0016829 syc2247_d 43ffbc2d318eb4177f26cd5cd66b425e 299 PRINTS PR00146 Dihydrodipicolinate synthase signature 134 151 9.0E-37 T 11-10-2018 IPR002220 DapA-like GO:0016829 syc2247_d 43ffbc2d318eb4177f26cd5cd66b425e 299 PRINTS PR00146 Dihydrodipicolinate synthase signature 76 94 9.0E-37 T 11-10-2018 IPR002220 DapA-like GO:0016829 syc2247_d 43ffbc2d318eb4177f26cd5cd66b425e 299 PRINTS PR00146 Dihydrodipicolinate synthase signature 40 61 9.0E-37 T 11-10-2018 IPR002220 DapA-like GO:0016829 syc2247_d 43ffbc2d318eb4177f26cd5cd66b425e 299 PRINTS PR00146 Dihydrodipicolinate synthase signature 108 124 9.0E-37 T 11-10-2018 IPR002220 DapA-like GO:0016829 syc2247_d 43ffbc2d318eb4177f26cd5cd66b425e 299 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 139 169 - T 11-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 syc2247_d 43ffbc2d318eb4177f26cd5cd66b425e 299 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 10 293 4.9E-107 T 11-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 syc2247_d 43ffbc2d318eb4177f26cd5cd66b425e 299 SUPERFAMILY SSF51569 4 296 1.26E-98 T 11-10-2018 syc2247_d 43ffbc2d318eb4177f26cd5cd66b425e 299 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 43 60 - T 11-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 syc2247_d 43ffbc2d318eb4177f26cd5cd66b425e 299 Pfam PF00701 Dihydrodipicolinate synthetase family 7 293 4.0E-104 T 11-10-2018 IPR002220 DapA-like GO:0016829 syc2247_d 43ffbc2d318eb4177f26cd5cd66b425e 299 Gene3D G3DSA:3.20.20.70 5 297 9.6E-113 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 syc2247_d 43ffbc2d318eb4177f26cd5cd66b425e 299 SMART SM01130 6 295 5.4E-132 T 11-10-2018 IPR002220 DapA-like GO:0016829 syc2247_d 43ffbc2d318eb4177f26cd5cd66b425e 299 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 6 293 63.312 T 11-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 syc2386_c 06548f639df22d850d0f6b658381cb38 39 Hamap MF_01316 Photosystem II reaction center protein I [psbI]. 1 36 17.502 T 11-10-2018 IPR003686 Photosystem II PsbI GO:0009523|GO:0009539|GO:0015979|GO:0016020 syc2386_c 06548f639df22d850d0f6b658381cb38 39 SUPERFAMILY SSF161041 1 35 1.02E-14 T 11-10-2018 IPR037271 Photosystem II PsbI superfamily GO:0015979 syc2386_c 06548f639df22d850d0f6b658381cb38 39 Pfam PF02532 Photosystem II reaction centre I protein (PSII 4.8 kDa protein) 1 36 9.3E-23 T 11-10-2018 IPR003686 Photosystem II PsbI GO:0009523|GO:0009539|GO:0015979|GO:0016020 syc1145_c b72214dc30da1c6f8e69140ca0b229d4 444 Pfam PF13742 OB-fold nucleic acid binding domain 49 141 3.6E-16 T 11-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 syc1145_c b72214dc30da1c6f8e69140ca0b229d4 444 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 45 428 20.904 T 11-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 syc1145_c b72214dc30da1c6f8e69140ca0b229d4 444 Pfam PF02601 Exonuclease VII, large subunit 167 390 1.1E-69 T 11-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 syc1145_c b72214dc30da1c6f8e69140ca0b229d4 444 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 49 402 3.3E-110 T 11-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 syc2398_d 3e2320500e33e7e5b6bfe2b75dcc1042 303 Pfam PF04471 Restriction endonuclease 157 277 1.4E-34 T 11-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 syc2398_d 3e2320500e33e7e5b6bfe2b75dcc1042 303 Gene3D G3DSA:3.40.91.100 138 301 1.6E-7 T 11-10-2018 syc2398_d 3e2320500e33e7e5b6bfe2b75dcc1042 303 Pfam PF14338 Mrr N-terminal domain 6 91 9.1E-33 T 11-10-2018 IPR025745 Restriction system protein Mrr-like N-terminal domain syc2398_d 3e2320500e33e7e5b6bfe2b75dcc1042 303 SUPERFAMILY SSF52980 162 281 1.55E-14 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 syc1903_d 9652ca13874f591930ae4db482b71285 122 Pfam PF11750 Protein of unknown function (DUF3307) 16 114 1.1E-10 T 11-10-2018 IPR021737 Bacteriophage phiKZ, Orf197 syc1845_d fbdb8b3458b48f65fb146363f58fa3d7 378 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 6 285 1.6E-58 T 11-10-2018 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 syc1845_d fbdb8b3458b48f65fb146363f58fa3d7 378 SUPERFAMILY SSF55931 3 360 2.22E-89 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 syc1845_d fbdb8b3458b48f65fb146363f58fa3d7 378 Gene3D G3DSA:3.30.590.20 1 366 3.7E-64 T 11-10-2018 syc1845_d fbdb8b3458b48f65fb146363f58fa3d7 378 TIGRFAM TIGR02048 gshA_cyano: putative glutamate--cysteine ligase 3 373 2.9E-195 T 11-10-2018 IPR011792 Glutamate--cysteine ligase, putative syc0596_c eb7dbeb8fed8f36e66e4275921c1e1e1 495 Gene3D G3DSA:3.50.50.60 43 476 1.6E-83 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc0596_c eb7dbeb8fed8f36e66e4275921c1e1e1 495 Gene3D G3DSA:1.10.405.10 143 232 1.6E-83 T 11-10-2018 syc0596_c eb7dbeb8fed8f36e66e4275921c1e1e1 495 SUPERFAMILY SSF54373 324 428 5.69E-8 T 11-10-2018 syc0596_c eb7dbeb8fed8f36e66e4275921c1e1e1 495 Pfam PF01593 Flavin containing amine oxidoreductase 50 476 1.7E-63 T 11-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 syc0596_c eb7dbeb8fed8f36e66e4275921c1e1e1 495 Gene3D G3DSA:3.90.660.10 78 428 1.6E-83 T 11-10-2018 syc0596_c eb7dbeb8fed8f36e66e4275921c1e1e1 495 PRINTS PR00757 Flavin-containing amine oxidase signature 458 475 6.7E-6 T 11-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 syc0596_c eb7dbeb8fed8f36e66e4275921c1e1e1 495 PRINTS PR00757 Flavin-containing amine oxidase signature 42 61 6.7E-6 T 11-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 syc0596_c eb7dbeb8fed8f36e66e4275921c1e1e1 495 SUPERFAMILY SSF51905 40 477 5.18E-58 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc2372_d 7a7f4702b0c5ddd73469f0e8687f6d32 475 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 358 377 - T 11-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 syc2372_d 7a7f4702b0c5ddd73469f0e8687f6d32 475 SMART SM01329 28 469 1.7E-158 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 syc2372_d 7a7f4702b0c5ddd73469f0e8687f6d32 475 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 1 474 2.4E-214 T 11-10-2018 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 syc2372_d 7a7f4702b0c5ddd73469f0e8687f6d32 475 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 29 469 7.4E-100 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 syc2372_d 7a7f4702b0c5ddd73469f0e8687f6d32 475 SUPERFAMILY SSF53659 11 473 1.14E-114 T 11-10-2018 syc0878_d cae776b72f79d5c6daa37b56d491d425 161 SUPERFAMILY SSF55729 5 150 6.65E-37 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase syc0878_d cae776b72f79d5c6daa37b56d491d425 161 Pfam PF00583 Acetyltransferase (GNAT) family 42 138 3.8E-21 T 11-10-2018 IPR000182 GNAT domain syc0878_d cae776b72f79d5c6daa37b56d491d425 161 Gene3D G3DSA:3.40.630.30 3 161 1.0E-48 T 11-10-2018 syc0878_d cae776b72f79d5c6daa37b56d491d425 161 PIRSF PIRSF037663 5 158 3.6E-11 T 11-10-2018 IPR017255 Acetyltransferase, GNAT, predicted syc0357_d 9f26b2a634b61c802bcf15a72ceca596 255 Pfam PF01553 Acyltransferase 48 181 1.7E-20 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 syc0357_d 9f26b2a634b61c802bcf15a72ceca596 255 SMART SM00563 62 184 1.4E-25 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 syc0357_d 9f26b2a634b61c802bcf15a72ceca596 255 SUPERFAMILY SSF69593 33 230 8.76E-28 T 11-10-2018 syc0898_c e9ce1a04a5799b65a5702e07e3c8d82f 619 SUPERFAMILY SSF143975 3 421 7.98E-138 T 11-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 syc0898_c e9ce1a04a5799b65a5702e07e3c8d82f 619 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 syc0898_c e9ce1a04a5799b65a5702e07e3c8d82f 619 SUPERFAMILY SSF52016 422 613 1.8E-60 T 11-10-2018 syc0898_c e9ce1a04a5799b65a5702e07e3c8d82f 619 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 510 521 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 syc0898_c e9ce1a04a5799b65a5702e07e3c8d82f 619 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 611 44.947 T 11-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 syc0898_c e9ce1a04a5799b65a5702e07e3c8d82f 619 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 611 3.4E-250 T 11-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 syc0898_c e9ce1a04a5799b65a5702e07e3c8d82f 619 Gene3D G3DSA:3.50.30.80 422 573 2.2E-55 T 11-10-2018 syc0898_c e9ce1a04a5799b65a5702e07e3c8d82f 619 Pfam PF00920 Dehydratase family 34 607 5.4E-220 T 11-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 syc1972_d f7a5c91b62c9660c47f20cb5b7cc2a0d 99 SUPERFAMILY SSF69065 6 95 4.71E-20 T 11-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 syc1972_d f7a5c91b62c9660c47f20cb5b7cc2a0d 99 Pfam PF00636 Ribonuclease III domain 7 81 4.6E-6 T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 syc1972_d f7a5c91b62c9660c47f20cb5b7cc2a0d 99 Gene3D G3DSA:1.10.1520.10 1 98 8.2E-28 T 11-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 syc1972_d f7a5c91b62c9660c47f20cb5b7cc2a0d 99 PIRSF PIRSF005520 1 98 5.5E-29 T 11-10-2018 IPR008226 Mini-ribonuclease 3 family syc0451_d 77fc9b8450265ba2ab62347878f20b8e 383 Pfam PF04286 Protein of unknown function (DUF445) 1 379 9.5E-51 T 11-10-2018 IPR007383 Protein of unknown function DUF445 syc0451_d 77fc9b8450265ba2ab62347878f20b8e 383 PIRSF PIRSF032178 1 381 4.5E-112 T 11-10-2018 IPR016991 Protein of unknown function UCP032178 syc1348_d d31991e15f8476bd4d572d54c3d2cdee 391 Pfam PF00899 ThiF family 19 251 1.1E-59 T 11-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 syc1348_d d31991e15f8476bd4d572d54c3d2cdee 391 SMART SM00450 286 386 7.4E-25 T 11-10-2018 IPR001763 Rhodanese-like domain syc1348_d d31991e15f8476bd4d572d54c3d2cdee 391 Gene3D G3DSA:3.40.250.10 268 387 8.7E-25 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily syc1348_d d31991e15f8476bd4d572d54c3d2cdee 391 SUPERFAMILY SSF69572 3 359 7.32E-99 T 11-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 syc1348_d d31991e15f8476bd4d572d54c3d2cdee 391 Gene3D G3DSA:3.40.50.720 11 259 1.3E-82 T 11-10-2018 syc1348_d d31991e15f8476bd4d572d54c3d2cdee 391 Pfam PF00581 Rhodanese-like domain 285 382 8.3E-12 T 11-10-2018 IPR001763 Rhodanese-like domain syc2361_c 664bc7c35e8662f40922828c6029c9f5 195 Pfam PF00578 AhpC/TSA family 12 134 4.9E-17 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 syc2361_c 664bc7c35e8662f40922828c6029c9f5 195 SUPERFAMILY SSF52833 5 189 2.98E-50 T 11-10-2018 IPR036249 Thioredoxin-like superfamily syc2361_c 664bc7c35e8662f40922828c6029c9f5 195 Gene3D G3DSA:3.40.30.10 3 194 9.1E-58 T 11-10-2018 syc0938_d 19e38f56db4bef54e1571b7a76b88b7a 406 Pfam PF13365 Trypsin-like peptidase domain 125 264 5.7E-36 T 11-10-2018 syc0938_d 19e38f56db4bef54e1571b7a76b88b7a 406 Gene3D G3DSA:2.30.42.10 302 405 1.6E-29 T 11-10-2018 syc0938_d 19e38f56db4bef54e1571b7a76b88b7a 406 SMART SM00228 301 391 6.1E-10 T 11-10-2018 IPR001478 PDZ domain GO:0005515 syc0938_d 19e38f56db4bef54e1571b7a76b88b7a 406 SUPERFAMILY SSF50156 282 398 4.73E-21 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 syc0938_d 19e38f56db4bef54e1571b7a76b88b7a 406 SUPERFAMILY SSF50494 68 292 3.18E-63 T 11-10-2018 IPR009003 Peptidase S1, PA clan syc0938_d 19e38f56db4bef54e1571b7a76b88b7a 406 Gene3D G3DSA:2.40.10.10 64 187 1.4E-32 T 11-10-2018 syc0938_d 19e38f56db4bef54e1571b7a76b88b7a 406 Pfam PF13180 PDZ domain 302 398 9.2E-15 T 11-10-2018 IPR001478 PDZ domain GO:0005515 syc0938_d 19e38f56db4bef54e1571b7a76b88b7a 406 PRINTS PR00834 HtrA/DegQ protease family signature 235 252 5.8E-47 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 syc0938_d 19e38f56db4bef54e1571b7a76b88b7a 406 PRINTS PR00834 HtrA/DegQ protease family signature 134 146 5.8E-47 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 syc0938_d 19e38f56db4bef54e1571b7a76b88b7a 406 PRINTS PR00834 HtrA/DegQ protease family signature 349 361 5.8E-47 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 syc0938_d 19e38f56db4bef54e1571b7a76b88b7a 406 PRINTS PR00834 HtrA/DegQ protease family signature 197 221 5.8E-47 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 syc0938_d 19e38f56db4bef54e1571b7a76b88b7a 406 PRINTS PR00834 HtrA/DegQ protease family signature 155 175 5.8E-47 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 syc0938_d 19e38f56db4bef54e1571b7a76b88b7a 406 PRINTS PR00834 HtrA/DegQ protease family signature 257 274 5.8E-47 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 syc0938_d 19e38f56db4bef54e1571b7a76b88b7a 406 Gene3D G3DSA:2.40.10.10 188 301 4.0E-41 T 11-10-2018 syc0129_c 30dd7ede1e1de28c2e59e49cbbe596df 111 SUPERFAMILY SSF55239 1 109 1.44E-45 T 11-10-2018 IPR036385 Ribulose bisphosphate carboxylase, small subunit superfamily KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 syc0129_c 30dd7ede1e1de28c2e59e49cbbe596df 111 Pfam PF00101 Ribulose bisphosphate carboxylase, small chain 12 108 7.0E-44 T 11-10-2018 IPR000894 Ribulose bisphosphate carboxylase small chain, domain KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 syc0129_c 30dd7ede1e1de28c2e59e49cbbe596df 111 SMART SM00961 11 108 5.9E-52 T 11-10-2018 IPR000894 Ribulose bisphosphate carboxylase small chain, domain KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 syc0129_c 30dd7ede1e1de28c2e59e49cbbe596df 111 Gene3D G3DSA:3.30.190.10 2 110 3.7E-52 T 11-10-2018 IPR036385 Ribulose bisphosphate carboxylase, small subunit superfamily KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 syc0105_d 5a7895f7ba1de01761d1c6d45bd5d670 478 SMART SM00382 100 259 2.3E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain syc0105_d 5a7895f7ba1de01761d1c6d45bd5d670 478 SUPERFAMILY SSF52540 70 285 3.12E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0105_d 5a7895f7ba1de01761d1c6d45bd5d670 478 Gene3D G3DSA:3.30.230.10 333 477 2.1E-15 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup syc0105_d 5a7895f7ba1de01761d1c6d45bd5d670 478 Pfam PF13481 AAA domain 93 237 1.8E-14 T 11-10-2018 syc0105_d 5a7895f7ba1de01761d1c6d45bd5d670 478 PRINTS PR01874 DNA repair protein radA signature 10 34 1.4E-84 T 11-10-2018 syc0105_d 5a7895f7ba1de01761d1c6d45bd5d670 478 PRINTS PR01874 DNA repair protein radA signature 228 256 1.4E-84 T 11-10-2018 syc0105_d 5a7895f7ba1de01761d1c6d45bd5d670 478 PRINTS PR01874 DNA repair protein radA signature 263 289 1.4E-84 T 11-10-2018 syc0105_d 5a7895f7ba1de01761d1c6d45bd5d670 478 PRINTS PR01874 DNA repair protein radA signature 189 213 1.4E-84 T 11-10-2018 syc0105_d 5a7895f7ba1de01761d1c6d45bd5d670 478 PRINTS PR01874 DNA repair protein radA signature 92 120 1.4E-84 T 11-10-2018 syc0105_d 5a7895f7ba1de01761d1c6d45bd5d670 478 PRINTS PR01874 DNA repair protein radA signature 133 150 1.4E-84 T 11-10-2018 syc0105_d 5a7895f7ba1de01761d1c6d45bd5d670 478 PRINTS PR01874 DNA repair protein radA signature 337 360 1.4E-84 T 11-10-2018 syc0105_d 5a7895f7ba1de01761d1c6d45bd5d670 478 Gene3D G3DSA:3.40.50.300 80 294 1.1E-37 T 11-10-2018 syc0105_d 5a7895f7ba1de01761d1c6d45bd5d670 478 Hamap MF_01498 DNA repair protein RadA [radA]. 21 468 42.571 T 11-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 syc0105_d 5a7895f7ba1de01761d1c6d45bd5d670 478 SUPERFAMILY SSF54211 270 468 2.2E-34 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold syc0105_d 5a7895f7ba1de01761d1c6d45bd5d670 478 Pfam PF13541 Subunit ChlI of Mg-chelatase 384 443 1.3E-7 T 11-10-2018 syc0105_d 5a7895f7ba1de01761d1c6d45bd5d670 478 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 464 3.5E-189 T 11-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 syc2217_d 7857678470212b953bce880c2250808a 667 Pfam PF11992 Domain of unknown function (DUF3488) 18 322 2.1E-73 T 11-10-2018 IPR021878 Protein of unknown function DUF3488 syc2217_d 7857678470212b953bce880c2250808a 667 Pfam PF01841 Transglutaminase-like superfamily 354 471 2.0E-24 T 11-10-2018 IPR002931 Transglutaminase-like syc2217_d 7857678470212b953bce880c2250808a 667 Gene3D G3DSA:3.10.620.30 325 489 1.3E-21 T 11-10-2018 syc2217_d 7857678470212b953bce880c2250808a 667 SUPERFAMILY SSF54001 274 608 2.33E-68 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily syc2217_d 7857678470212b953bce880c2250808a 667 SMART SM00460 402 473 1.5E-22 T 11-10-2018 IPR002931 Transglutaminase-like syc2217_d 7857678470212b953bce880c2250808a 667 Pfam PF13559 Domain of unknown function (DUF4129) 589 657 2.1E-7 T 11-10-2018 IPR025403 Domain of unknown function DUF4129 syc0927_c 5ca0c346f046fbb345a7696f79fc3ce1 310 Gene3D G3DSA:3.40.50.150 42 267 2.7E-53 T 11-10-2018 syc0927_c 5ca0c346f046fbb345a7696f79fc3ce1 310 SUPERFAMILY SSF53335 29 309 2.41E-54 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase syc0927_c 5ca0c346f046fbb345a7696f79fc3ce1 310 Pfam PF08241 Methyltransferase domain 95 190 4.2E-22 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 syc1672_c a060afe9110e2ff0af6dc354e0ae0e53 172 Pfam PF10369 Small subunit of acetolactate synthase 84 156 2.3E-29 T 11-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 syc1672_c a060afe9110e2ff0af6dc354e0ae0e53 172 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 157 1.3E-65 T 11-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 syc1672_c a060afe9110e2ff0af6dc354e0ae0e53 172 Pfam PF13710 ACT domain 12 73 1.5E-16 T 11-10-2018 syc1672_c a060afe9110e2ff0af6dc354e0ae0e53 172 SUPERFAMILY SSF55021 79 158 1.7E-27 T 11-10-2018 syc1672_c a060afe9110e2ff0af6dc354e0ae0e53 172 SUPERFAMILY SSF55021 1 76 6.99E-22 T 11-10-2018 syc1672_c a060afe9110e2ff0af6dc354e0ae0e53 172 Gene3D G3DSA:3.30.70.260 1 78 1.9E-35 T 11-10-2018 syc1672_c a060afe9110e2ff0af6dc354e0ae0e53 172 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 76 1.0E-36 T 11-10-2018 syc1672_c a060afe9110e2ff0af6dc354e0ae0e53 172 Gene3D G3DSA:3.30.70.1150 83 161 5.4E-31 T 11-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal syc1076_c 65c06f366ebad8c3e65453c396dbb6bb 505 SUPERFAMILY SSF111352 86 470 2.88E-113 T 11-10-2018 syc1076_c 65c06f366ebad8c3e65453c396dbb6bb 505 Gene3D G3DSA:1.10.3430.10 68 503 8.6E-139 T 11-10-2018 IPR029020 Ammonium/urea transporter syc1076_c 65c06f366ebad8c3e65453c396dbb6bb 505 Pfam PF00909 Ammonium Transporter Family 89 489 2.8E-123 T 11-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 syc1076_c 65c06f366ebad8c3e65453c396dbb6bb 505 TIGRFAM TIGR00836 amt: ammonium transporter 87 489 8.7E-129 T 11-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 syc2415_d 2878ba11c3d795675ad0697818ab98fb 161 Pfam PF13239 2TM domain 72 140 1.4E-9 T 11-10-2018 IPR025698 2TM domain syc2168_d c065d3e1015aacabbfb1d6d418fb67d4 97 Gene3D G3DSA:2.30.30.100 26 96 2.4E-23 T 11-10-2018 syc2168_d c065d3e1015aacabbfb1d6d418fb67d4 97 SUPERFAMILY SSF50182 39 95 3.38E-7 T 11-10-2018 IPR010920 LSM domain superfamily syc2163_c 1d6e6bb8e216b02d58dc164d31b62d93 256 Gene3D G3DSA:3.60.21.10 2 228 2.8E-49 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like syc2163_c 1d6e6bb8e216b02d58dc164d31b62d93 256 Pfam PF00149 Calcineurin-like phosphoesterase 6 148 4.9E-12 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 syc2163_c 1d6e6bb8e216b02d58dc164d31b62d93 256 SUPERFAMILY SSF56300 1 236 8.2E-48 T 11-10-2018 syc2391_d d968020409f81e4edbd717fcfb093d58 464 Pfam PF01554 MatE 19 178 2.1E-24 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 syc2391_d d968020409f81e4edbd717fcfb093d58 464 Pfam PF01554 MatE 246 406 1.1E-17 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 syc2391_d d968020409f81e4edbd717fcfb093d58 464 TIGRFAM TIGR00797 matE: MATE efflux family protein 19 424 7.5E-58 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 syc2469_c 3dcf5287ae6a6af59e4294343ef70779 142 PRINTS PR00332 Histidine triad family signature 91 101 6.5E-6 T 11-10-2018 IPR001310 Histidine triad (HIT) protein syc2469_c 3dcf5287ae6a6af59e4294343ef70779 142 PRINTS PR00332 Histidine triad family signature 24 42 6.5E-6 T 11-10-2018 IPR001310 Histidine triad (HIT) protein syc2469_c 3dcf5287ae6a6af59e4294343ef70779 142 Gene3D G3DSA:3.30.428.10 9 124 2.0E-31 T 11-10-2018 IPR036265 HIT-like superfamily syc2469_c 3dcf5287ae6a6af59e4294343ef70779 142 SUPERFAMILY SSF54197 16 117 6.52E-32 T 11-10-2018 IPR036265 HIT-like superfamily syc2469_c 3dcf5287ae6a6af59e4294343ef70779 142 Pfam PF01230 HIT domain 16 105 3.3E-18 T 11-10-2018 IPR001310 Histidine triad (HIT) protein syc1340_c a9416b772b2690279f38ff02a11d65a6 317 Pfam PF06089 L-asparaginase II 14 314 1.8E-103 T 11-10-2018 IPR010349 L-asparaginase II syc1933_c a63f83ba7417ede61ecd6bc580423bb0 218 Gene3D G3DSA:3.40.50.150 100 216 1.7E-14 T 11-10-2018 syc1933_c a63f83ba7417ede61ecd6bc580423bb0 218 SUPERFAMILY SSF53335 99 214 4.71E-11 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase syc1933_c a63f83ba7417ede61ecd6bc580423bb0 218 Pfam PF13578 Methyltransferase domain 130 211 3.5E-8 T 11-10-2018 syc2377_c 5e9c84e170434ac9de60d7abec84bd5b 338 PIRSF PIRSF000443 1 337 6.3E-70 T 11-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 syc2377_c 5e9c84e170434ac9de60d7abec84bd5b 338 Pfam PF00561 alpha/beta hydrolase fold 63 311 6.8E-14 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 syc2377_c 5e9c84e170434ac9de60d7abec84bd5b 338 Gene3D G3DSA:3.40.50.1820 2 338 6.4E-91 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold syc2377_c 5e9c84e170434ac9de60d7abec84bd5b 338 SUPERFAMILY SSF53474 3 311 5.7E-71 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold syc0826_c 600a07ec679f9fa40f756a0f5715e785 211 Gene3D G3DSA:2.160.10.10 2 210 1.4E-72 T 11-10-2018 syc0826_c 600a07ec679f9fa40f756a0f5715e785 211 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 115 149 2.3E-8 T 11-10-2018 IPR001451 Hexapeptide repeat syc0826_c 600a07ec679f9fa40f756a0f5715e785 211 SUPERFAMILY SSF51161 15 206 5.82E-47 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily syc0826_c 600a07ec679f9fa40f756a0f5715e785 211 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 124 152 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 syc1518_d 1fde2fb470a4556fb14ee499c52a2745 202 SUPERFAMILY SSF53271 19 192 1.42E-32 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like syc1518_d 1fde2fb470a4556fb14ee499c52a2745 202 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 31 181 5.0E-44 T 11-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 syc1518_d 1fde2fb470a4556fb14ee499c52a2745 202 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 202 25.434 T 11-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 syc1518_d 1fde2fb470a4556fb14ee499c52a2745 202 Gene3D G3DSA:3.40.50.2020 15 193 2.8E-41 T 11-10-2018 syc2038_c 504b86a3997649ba2478af353f2d3f4e 414 Gene3D G3DSA:3.50.50.60 19 351 4.6E-97 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc2038_c 504b86a3997649ba2478af353f2d3f4e 414 SUPERFAMILY SSF51905 18 397 8.43E-61 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc2038_c 504b86a3997649ba2478af353f2d3f4e 414 Gene3D G3DSA:3.30.9.50 89 282 4.6E-97 T 11-10-2018 syc2038_c 504b86a3997649ba2478af353f2d3f4e 414 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 307 320 - T 11-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 syc2038_c 504b86a3997649ba2478af353f2d3f4e 414 Pfam PF01494 FAD binding domain 18 359 6.5E-39 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 syc2038_c 504b86a3997649ba2478af353f2d3f4e 414 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 169 184 2.6E-20 T 11-10-2018 syc2038_c 504b86a3997649ba2478af353f2d3f4e 414 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 19 41 2.6E-20 T 11-10-2018 syc2038_c 504b86a3997649ba2478af353f2d3f4e 414 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 308 324 2.6E-20 T 11-10-2018 syc2038_c 504b86a3997649ba2478af353f2d3f4e 414 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 293 308 2.6E-20 T 11-10-2018 syc2038_c 504b86a3997649ba2478af353f2d3f4e 414 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 19 402 2.9E-116 T 11-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 syc0215_d 48f5af834f6c8bc2af61904d6d67fec3 283 Pfam PF12565 Protein of unknown function (DUF3747) 32 204 1.1E-66 T 11-10-2018 IPR022222 Protein of unknown function DUF3747 syc1924_d 9fb0065f762ab5759fcf4019fd500221 176 PIRSF PIRSF005900 8 174 5.0E-40 T 11-10-2018 IPR002177 DNA-binding protein Dps syc1924_d 9fb0065f762ab5759fcf4019fd500221 176 ProSitePatterns PS00819 Dps protein family signature 2. 76 90 - T 11-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 syc1924_d 9fb0065f762ab5759fcf4019fd500221 176 Pfam PF00210 Ferritin-like domain 30 168 1.0E-27 T 11-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 syc1924_d 9fb0065f762ab5759fcf4019fd500221 176 Gene3D G3DSA:1.20.1260.10 1 176 5.2E-56 T 11-10-2018 IPR012347 Ferritin-like syc1924_d 9fb0065f762ab5759fcf4019fd500221 176 SUPERFAMILY SSF47240 15 168 8.56E-40 T 11-10-2018 IPR009078 Ferritin-like superfamily syc1924_d 9fb0065f762ab5759fcf4019fd500221 176 ProSitePatterns PS00818 Dps protein family signature 1. 50 66 - T 11-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 syc0747_d bf2d75c1f2126e7a18dd70b6c6a80cdc 142 SMART SM00360 4 76 3.5E-17 T 11-10-2018 IPR000504 RNA recognition motif domain GO:0003676 syc0747_d bf2d75c1f2126e7a18dd70b6c6a80cdc 142 SUPERFAMILY SSF54928 4 105 4.03E-23 T 11-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 syc0747_d bf2d75c1f2126e7a18dd70b6c6a80cdc 142 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 5 74 1.0E-15 T 11-10-2018 IPR000504 RNA recognition motif domain GO:0003676 syc0747_d bf2d75c1f2126e7a18dd70b6c6a80cdc 142 Gene3D G3DSA:3.30.70.330 1 112 2.6E-24 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily syc0526_c 9811ad917b4d64060e5141da89649787 316 Gene3D G3DSA:3.20.20.120 105 285 1.3E-78 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily syc0526_c 9811ad917b4d64060e5141da89649787 316 SUPERFAMILY SSF51604 119 304 7.37E-34 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily syc0526_c 9811ad917b4d64060e5141da89649787 316 SMART SM00922 111 211 1.4E-4 T 11-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal syc0526_c 9811ad917b4d64060e5141da89649787 316 Pfam PF13378 Enolase C-terminal domain-like 126 289 1.3E-11 T 11-10-2018 IPR029065 Enolase C-terminal domain-like syc0526_c 9811ad917b4d64060e5141da89649787 316 TIGRFAM TIGR01927 menC_gamma/gm+: o-succinylbenzoate synthase 9 302 1.3E-64 T 11-10-2018 syc0526_c 9811ad917b4d64060e5141da89649787 316 Gene3D G3DSA:3.30.390.10 10 104 1.3E-78 T 11-10-2018 IPR029017 Enolase-like, N-terminal syc0526_c 9811ad917b4d64060e5141da89649787 316 SUPERFAMILY SSF54826 4 94 2.24E-18 T 11-10-2018 syc0963_d bc772d7149a6009f758011429c1ddd47 297 Hamap MF_00117 33 kDa chaperonin [hslO]. 2 293 34.289 T 11-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 syc0963_d bc772d7149a6009f758011429c1ddd47 297 Gene3D G3DSA:3.90.1280.10 239 294 4.4E-15 T 11-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 syc0963_d bc772d7149a6009f758011429c1ddd47 297 Gene3D G3DSA:3.55.30.10 1 237 3.9E-75 T 11-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 syc0963_d bc772d7149a6009f758011429c1ddd47 297 PIRSF PIRSF005261 1 294 1.7E-65 T 11-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 syc0963_d bc772d7149a6009f758011429c1ddd47 297 SUPERFAMILY SSF64397 4 243 5.62E-65 T 11-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 syc0963_d bc772d7149a6009f758011429c1ddd47 297 SUPERFAMILY SSF118352 235 292 1.83E-17 T 11-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 syc0963_d bc772d7149a6009f758011429c1ddd47 297 Pfam PF01430 Hsp33 protein 3 280 5.8E-78 T 11-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 syc1621_d 3ada9d6c7073b19f15162594b5d563c2 230 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 18 38 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site syc1714_c 21ad502b43e67e3a09e7beae5b7a0934 235 Pfam PF00106 short chain dehydrogenase 60 197 6.7E-19 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR syc1714_c 21ad502b43e67e3a09e7beae5b7a0934 235 SUPERFAMILY SSF51735 59 205 2.25E-23 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily syc1714_c 21ad502b43e67e3a09e7beae5b7a0934 235 Gene3D G3DSA:3.40.50.720 29 222 7.6E-27 T 11-10-2018 syc1607_d 9784f12f685d06ec93414aa132f63e60 446 Gene3D G3DSA:3.30.479.30 99 215 6.9E-30 T 11-10-2018 syc1607_d 9784f12f685d06ec93414aa132f63e60 446 SUPERFAMILY SSF117892 90 231 4.71E-30 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily syc1607_d 9784f12f685d06ec93414aa132f63e60 446 Pfam PF01145 SPFH domain / Band 7 family 55 240 3.0E-24 T 11-10-2018 IPR001107 Band 7 domain syc1607_d 9784f12f685d06ec93414aa132f63e60 446 SMART SM00244 51 225 2.3E-12 T 11-10-2018 IPR001107 Band 7 domain syc2085_d cf408b06d83684e17d1a3f321a794d2a 215 SUPERFAMILY SSF46626 57 205 8.37E-25 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 syc2085_d cf408b06d83684e17d1a3f321a794d2a 215 Hamap MF_01378 Cytochrome c-550 [psbV]. 54 215 43.199 T 11-10-2018 IPR017851 Photosystem II PsbV, cytochrome c-550 precursor GO:0009523|GO:0015979|GO:0020037|GO:0042651 syc2085_d cf408b06d83684e17d1a3f321a794d2a 215 Pfam PF14495 Cytochrome c-550 domain 80 215 7.8E-58 T 11-10-2018 IPR029490 Cytochrome c-550 domain syc2085_d cf408b06d83684e17d1a3f321a794d2a 215 TIGRFAM TIGR03045 PS_II_C550: cytochrome c-550 54 212 1.1E-75 T 11-10-2018 IPR017851 Photosystem II PsbV, cytochrome c-550 precursor GO:0009523|GO:0015979|GO:0020037|GO:0042651 syc2085_d cf408b06d83684e17d1a3f321a794d2a 215 Gene3D G3DSA:1.10.760.10 81 209 2.5E-56 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 syc2085_d cf408b06d83684e17d1a3f321a794d2a 215 PIRSF PIRSF005890 47 215 1.2E-69 T 11-10-2018 IPR016003 Photosystem II cytochrome c-550 precursor GO:0005506|GO:0009523|GO:0015979|GO:0020037|GO:0022904 syc1461_c 2e50db227743a6eddf78903d1bd1f780 158 SUPERFAMILY SSF55811 13 119 3.93E-20 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 syc1461_c 2e50db227743a6eddf78903d1bd1f780 158 Gene3D G3DSA:3.90.79.10 4 150 1.3E-17 T 11-10-2018 syc1461_c 2e50db227743a6eddf78903d1bd1f780 158 Pfam PF00293 NUDIX domain 15 95 7.9E-12 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 syc1461_c 2e50db227743a6eddf78903d1bd1f780 158 ProSitePatterns PS00893 Nudix box signature. 47 68 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 syc2326_d 3248c4077a1f67be5319e12d4a3a1edb 343 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 7 213 2.4E-39 T 11-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 syc2326_d 3248c4077a1f67be5319e12d4a3a1edb 343 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 8 326 3.2E-90 T 11-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 syc0985_c 8e2ee23087902432fea9d8fe96050285 80 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 4 78 3.2E-34 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 syc0985_c 8e2ee23087902432fea9d8fe96050285 80 ProSitePatterns PS00012 Phosphopantetheine attachment site. 34 49 - T 11-10-2018 IPR006162 Phosphopantetheine attachment site syc0985_c 8e2ee23087902432fea9d8fe96050285 80 Hamap MF_01217 Acyl carrier protein [acpP]. 5 79 22.499 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 syc0985_c 8e2ee23087902432fea9d8fe96050285 80 Gene3D G3DSA:1.10.1200.10 1 80 1.1E-30 T 11-10-2018 IPR036736 ACP-like superfamily syc0985_c 8e2ee23087902432fea9d8fe96050285 80 SUPERFAMILY SSF47336 1 78 1.02E-25 T 11-10-2018 IPR036736 ACP-like superfamily syc0985_c 8e2ee23087902432fea9d8fe96050285 80 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 43 78 3.0E-12 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 syc0985_c 8e2ee23087902432fea9d8fe96050285 80 SMART SM00823 Phosphopantetheine attachment site 7 79 0.0094 T 11-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 syc0985_c 8e2ee23087902432fea9d8fe96050285 80 Pfam PF00550 Phosphopantetheine attachment site 9 75 1.2E-16 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain syc0385_d 6a5827559ae2eeb5cc84400b6e965f48 95 Gene3D G3DSA:3.30.428.70 2 44 3.9E-5 T 11-10-2018 syc0385_d 6a5827559ae2eeb5cc84400b6e965f48 95 Pfam PF09830 ATP adenylyltransferase 11 41 1.2E-6 T 11-10-2018 IPR019200 ATP adenylyltransferase, C-terminal GO:0003877 KEGG: 00230+2.7.7.53|KEGG: 00920+2.7.7.5|MetaCyc: PWY-5279 syc1089_d a9fdeac062a8a5e5cb266af7d70018f8 542 Gene3D G3DSA:3.20.20.70 8 338 9.0E-114 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 syc1089_d a9fdeac062a8a5e5cb266af7d70018f8 542 SUPERFAMILY SSF110921 421 524 1.22E-23 T 11-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 syc1089_d a9fdeac062a8a5e5cb266af7d70018f8 542 TIGRFAM TIGR00977 citramal_synth: citramalate synthase 9 532 4.1E-261 T 11-10-2018 IPR005675 Citramalate synthase GO:0019752|GO:0046912 KEGG: 00290+2.3.1.182|KEGG: 00660+2.3.1.182|MetaCyc: PWY-5101 syc1089_d a9fdeac062a8a5e5cb266af7d70018f8 542 Pfam PF00682 HMGL-like 9 282 7.1E-43 T 11-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 syc1089_d a9fdeac062a8a5e5cb266af7d70018f8 542 SUPERFAMILY SSF51569 7 305 3.85E-83 T 11-10-2018 syc1089_d a9fdeac062a8a5e5cb266af7d70018f8 542 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 16 32 - T 11-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 syc1089_d a9fdeac062a8a5e5cb266af7d70018f8 542 SMART SM00917 387 528 7.0E-37 T 11-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 syc1089_d a9fdeac062a8a5e5cb266af7d70018f8 542 Pfam PF08502 LeuA allosteric (dimerisation) domain 388 526 3.8E-31 T 11-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 syc1089_d a9fdeac062a8a5e5cb266af7d70018f8 542 Gene3D G3DSA:3.30.160.270 379 526 1.7E-9 T 11-10-2018 syc2064_d 686c619f4eb37abfc569b2aad888af74 193 Gene3D G3DSA:2.40.128.20 1 184 1.4E-62 T 11-10-2018 IPR012674 Calycin syc2064_d 686c619f4eb37abfc569b2aad888af74 193 Pfam PF09367 CpeS-like protein 2 171 5.2E-71 T 11-10-2018 IPR018536 Chromophore lyase CpcS/CpeS GO:0017009 syc2064_d 686c619f4eb37abfc569b2aad888af74 193 Hamap MF_01459 Chromophore lyase CpcS/CpeS [cpcS]. 1 172 29.793 T 11-10-2018 IPR018536 Chromophore lyase CpcS/CpeS GO:0017009 syc0603_c aade7b241c3a9a157cb52ff39ae89136 208 SUPERFAMILY SSF52540 24 199 3.75E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0603_c aade7b241c3a9a157cb52ff39ae89136 208 Gene3D G3DSA:3.40.50.300 6 206 2.0E-83 T 11-10-2018 syc0603_c aade7b241c3a9a157cb52ff39ae89136 208 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 12 196 1.2E-84 T 11-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 syc0603_c aade7b241c3a9a157cb52ff39ae89136 208 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 28 200 38.046 T 11-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 syc0603_c aade7b241c3a9a157cb52ff39ae89136 208 Pfam PF01583 Adenylylsulphate kinase 29 182 1.6E-70 T 11-10-2018 syc1887_d 4c486ba96d03a90c440b948f64304609 130 ProSitePatterns PS00054 Ribosomal protein S11 signature. 98 120 - T 11-10-2018 IPR018102 Ribosomal S11, conserved site syc1887_d 4c486ba96d03a90c440b948f64304609 130 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 6 130 34.09 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 syc1887_d 4c486ba96d03a90c440b948f64304609 130 Gene3D G3DSA:3.30.420.80 2 130 3.2E-53 T 11-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 syc1887_d 4c486ba96d03a90c440b948f64304609 130 SUPERFAMILY SSF53137 14 130 4.05E-48 T 11-10-2018 syc1887_d 4c486ba96d03a90c440b948f64304609 130 Pfam PF00411 Ribosomal protein S11 20 129 1.7E-49 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 syc1887_d 4c486ba96d03a90c440b948f64304609 130 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 11 127 4.1E-57 T 11-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc1887_d 4c486ba96d03a90c440b948f64304609 130 PIRSF PIRSF002131 1 130 1.1E-53 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 syc1153_d 16a5fa1eb6d812134cd3d5f1edf1af06 398 PIRSF PIRSF018953 1 398 2.9E-188 T 11-10-2018 IPR016741 Uncharacterised conserved protein UCP018953 syc1153_d 16a5fa1eb6d812134cd3d5f1edf1af06 398 SMART SM01204 237 377 3.7E-37 T 11-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 syc1153_d 16a5fa1eb6d812134cd3d5f1edf1af06 398 SMART SM00897 31 231 5.7E-45 T 11-10-2018 IPR013702 FIST domain, N-terminal syc1153_d 16a5fa1eb6d812134cd3d5f1edf1af06 398 Pfam PF10442 FIST C domain 237 376 4.1E-30 T 11-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 syc1153_d 16a5fa1eb6d812134cd3d5f1edf1af06 398 Pfam PF08495 FIST N domain 33 227 5.0E-30 T 11-10-2018 IPR013702 FIST domain, N-terminal syc1305_c 0966a869ca816c36ce5baa87b7386337 462 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 170 442 9.9E-66 T 11-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 syc1305_c 0966a869ca816c36ce5baa87b7386337 462 SUPERFAMILY SSF51690 167 460 5.42E-45 T 11-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 syc1305_c 0966a869ca816c36ce5baa87b7386337 462 PIRSF PIRSF005943 1 462 4.3E-181 T 11-10-2018 IPR016471 Nicotinamide phosphoribosyl transferase Reactome: R-HSA-1368108|Reactome: R-HSA-197264 syc1305_c 0966a869ca816c36ce5baa87b7386337 462 Gene3D G3DSA:3.20.20.70 135 385 8.3E-96 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 syc1573_d 723c9d41c88b419c3f0803634e1245b8 199 SUPERFAMILY SSF52096 18 196 6.05E-73 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily syc1573_d 723c9d41c88b419c3f0803634e1245b8 199 Gene3D G3DSA:3.90.226.10 10 198 6.2E-81 T 11-10-2018 syc1573_d 723c9d41c88b419c3f0803634e1245b8 199 Pfam PF00574 Clp protease 18 196 1.2E-87 T 11-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA syc1573_d 723c9d41c88b419c3f0803634e1245b8 199 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 115 128 - T 11-10-2018 IPR033135 ClpP, histidine active site syc1573_d 723c9d41c88b419c3f0803634e1245b8 199 PRINTS PR00127 Clp protease catalytic subunit P signature 22 37 6.4E-55 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 syc1573_d 723c9d41c88b419c3f0803634e1245b8 199 PRINTS PR00127 Clp protease catalytic subunit P signature 172 191 6.4E-55 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 syc1573_d 723c9d41c88b419c3f0803634e1245b8 199 PRINTS PR00127 Clp protease catalytic subunit P signature 62 82 6.4E-55 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 syc1573_d 723c9d41c88b419c3f0803634e1245b8 199 PRINTS PR00127 Clp protease catalytic subunit P signature 114 133 6.4E-55 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 syc1573_d 723c9d41c88b419c3f0803634e1245b8 199 PRINTS PR00127 Clp protease catalytic subunit P signature 93 110 6.4E-55 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 syc1573_d 723c9d41c88b419c3f0803634e1245b8 199 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 4 197 44.48 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 syc1573_d 723c9d41c88b419c3f0803634e1245b8 199 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 93 104 - T 11-10-2018 IPR018215 ClpP, Ser active site syc1438_d ba753f0061c0c0fefdf2d02a956e3023 184 SUPERFAMILY SSF55200 96 181 3.01E-33 T 11-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 syc1438_d ba753f0061c0c0fefdf2d02a956e3023 184 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 19 88 3.5E-31 T 11-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 syc1438_d ba753f0061c0c0fefdf2d02a956e3023 184 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 95 180 6.2E-36 T 11-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 syc1438_d ba753f0061c0c0fefdf2d02a956e3023 184 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 19 181 5.5E-71 T 11-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 syc1438_d ba753f0061c0c0fefdf2d02a956e3023 184 Gene3D G3DSA:3.10.20.80 14 87 4.0E-33 T 11-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 syc1438_d ba753f0061c0c0fefdf2d02a956e3023 184 ProSitePatterns PS00938 Initiation factor 3 signature. 70 83 - T 11-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 syc1438_d ba753f0061c0c0fefdf2d02a956e3023 184 Gene3D G3DSA:3.30.110.10 88 182 6.8E-38 T 11-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 syc1438_d ba753f0061c0c0fefdf2d02a956e3023 184 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 9 182 29.202 T 11-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 syc1438_d ba753f0061c0c0fefdf2d02a956e3023 184 SUPERFAMILY SSF54364 17 90 6.15E-29 T 11-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 syc1858_c 36a69f2e75a0e02aab53579256a95a2c 176 Gene3D G3DSA:3.40.630.30 20 144 2.8E-30 T 11-10-2018 syc1858_c 36a69f2e75a0e02aab53579256a95a2c 176 Pfam PF00583 Acetyltransferase (GNAT) family 30 135 7.3E-13 T 11-10-2018 IPR000182 GNAT domain syc1858_c 36a69f2e75a0e02aab53579256a95a2c 176 SUPERFAMILY SSF55729 24 143 1.45E-23 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase syc2394_d 0e44c5c3574f9623a90d10372ca17919 249 SUPERFAMILY SSF51182 19 248 9.85E-66 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily syc2394_d 0e44c5c3574f9623a90d10372ca17919 249 Gene3D G3DSA:2.60.120.10 22 248 5.6E-74 T 11-10-2018 IPR014710 RmlC-like jelly roll fold syc2394_d 0e44c5c3574f9623a90d10372ca17919 249 Gene3D G3DSA:2.60.120.10 26 149 5.6E-74 T 11-10-2018 IPR014710 RmlC-like jelly roll fold syc2394_d 0e44c5c3574f9623a90d10372ca17919 249 PIRSF PIRSF006232 16 247 1.3E-45 T 11-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 syc2394_d 0e44c5c3574f9623a90d10372ca17919 249 Pfam PF02678 Pirin 28 133 7.9E-34 T 11-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 syc2238_c 758b5888e56855fbc6f4995093caf3b1 168 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 66 103 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 syc2238_c 758b5888e56855fbc6f4995093caf3b1 168 SUPERFAMILY SSF53927 12 163 6.17E-53 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 syc2238_c 758b5888e56855fbc6f4995093caf3b1 168 Gene3D G3DSA:3.40.140.10 8 168 7.5E-55 T 11-10-2018 syc2238_c 758b5888e56855fbc6f4995093caf3b1 168 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 21 162 45.121 T 11-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 syc2238_c 758b5888e56855fbc6f4995093caf3b1 168 Pfam PF14437 MafB19-like deaminase 15 162 1.4E-33 T 11-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 syc2001_c 5beddd904229cedba60d46ef5b7efca3 513 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 232 256 2.6E-27 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc2001_c 5beddd904229cedba60d46ef5b7efca3 513 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 320 339 2.6E-27 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc2001_c 5beddd904229cedba60d46ef5b7efca3 513 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 160 184 2.6E-27 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc2001_c 5beddd904229cedba60d46ef5b7efca3 513 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 375 401 2.6E-27 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc2001_c 5beddd904229cedba60d46ef5b7efca3 513 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 130 149 2.6E-27 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc2001_c 5beddd904229cedba60d46ef5b7efca3 513 Pfam PF00361 Proton-conducting membrane transporter 124 418 6.7E-56 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc2001_c 5beddd904229cedba60d46ef5b7efca3 513 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 5 480 7.5E-129 T 11-10-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc0672_c 679cdac71adc0a7d0d4d56e5ffc098de 582 Pfam PF03109 ABC1 family 138 256 4.7E-37 T 11-10-2018 IPR004147 UbiB domain syc0672_c 679cdac71adc0a7d0d4d56e5ffc098de 582 SUPERFAMILY SSF56112 120 452 1.76E-29 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily syc0017_d 2f32038b10d44da62c282b5944a5f55b 224 Gene3D G3DSA:2.160.10.10 35 203 7.5E-31 T 11-10-2018 syc0017_d 2f32038b10d44da62c282b5944a5f55b 224 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 150 181 2.8E-5 T 11-10-2018 IPR001451 Hexapeptide repeat syc0017_d 2f32038b10d44da62c282b5944a5f55b 224 SUPERFAMILY SSF51161 46 205 9.19E-29 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily syc1736_c ccfca9265ce6db2115017e7ecd057217 376 SUPERFAMILY SSF111369 58 286 1.57E-35 T 11-10-2018 syc1736_c ccfca9265ce6db2115017e7ecd057217 376 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 369 9.3E-69 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 syc1736_c ccfca9265ce6db2115017e7ecd057217 376 Gene3D G3DSA:2.40.30.170 62 273 8.2E-45 T 11-10-2018 syc1736_c ccfca9265ce6db2115017e7ecd057217 376 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 67 281 1.2E-22 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain syc1736_c ccfca9265ce6db2115017e7ecd057217 376 Gene3D G3DSA:1.10.287.470 103 176 8.2E-45 T 11-10-2018 syc1736_c ccfca9265ce6db2115017e7ecd057217 376 Gene3D G3DSA:2.40.420.20 274 371 9.3E-18 T 11-10-2018 syc1736_c ccfca9265ce6db2115017e7ecd057217 376 Gene3D G3DSA:2.40.50.100 68 210 8.2E-45 T 11-10-2018 syc1634_c a9cb651c5e1a06427ed6593338375b70 268 Pfam PF04367 Protein of unknown function (DUF502) 94 199 1.9E-34 T 11-10-2018 IPR007462 Protein of unknown function DUF502 syc1419_d 113484bf70034196ec8ea43697776915 216 Gene3D G3DSA:1.10.150.240 9 75 5.9E-47 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 syc1419_d 113484bf70034196ec8ea43697776915 216 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 34 174 1.1E-17 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 syc1419_d 113484bf70034196ec8ea43697776915 216 SUPERFAMILY SSF56784 10 203 2.11E-43 T 11-10-2018 IPR036412 HAD-like superfamily syc1419_d 113484bf70034196ec8ea43697776915 216 Gene3D G3DSA:3.40.50.1000 8 190 5.9E-47 T 11-10-2018 IPR023214 HAD superfamily syc1419_d 113484bf70034196ec8ea43697776915 216 Pfam PF13419 Haloacid dehalogenase-like hydrolase 14 173 7.3E-15 T 11-10-2018 syc1831_d a6a81e20be44623493613ec7336b3a8f 381 Hamap MF_01086 UPF0284 protein . 1 381 131.202 T 11-10-2018 IPR002805 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, putative syc1831_d a6a81e20be44623493613ec7336b3a8f 381 Gene3D G3DSA:3.40.50.10210 20 371 1.8E-104 T 11-10-2018 syc1831_d a6a81e20be44623493613ec7336b3a8f 381 TIGRFAM TIGR00303 TIGR00303: TIGR00303 family protein 20 362 1.1E-99 T 11-10-2018 IPR002805 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, putative syc1831_d a6a81e20be44623493613ec7336b3a8f 381 SUPERFAMILY SSF52733 42 366 1.29E-53 T 11-10-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 syc1560_d 423c01fad8bbcebdd1cd68d66fc6af39 81 SUPERFAMILY SSF159127 1 78 4.45E-19 T 11-10-2018 IPR037254 HupF/HypC superfamily syc1560_d 423c01fad8bbcebdd1cd68d66fc6af39 81 Gene3D G3DSA:2.40.50.970 1 81 2.8E-24 T 11-10-2018 IPR037254 HupF/HypC superfamily syc1560_d 423c01fad8bbcebdd1cd68d66fc6af39 81 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 76 8.9E-19 T 11-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC syc1560_d 423c01fad8bbcebdd1cd68d66fc6af39 81 ProSitePatterns PS01097 Hydrogenases expression/synthesis hupF/hypC family signature. 1 9 - T 11-10-2018 IPR019812 Hydrogenase assembly chaperone, conserved site syc1560_d 423c01fad8bbcebdd1cd68d66fc6af39 81 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 47 63 1.8E-10 T 11-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC syc1560_d 423c01fad8bbcebdd1cd68d66fc6af39 81 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 1.8E-10 T 11-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC syc1560_d 423c01fad8bbcebdd1cd68d66fc6af39 81 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 65 77 1.8E-10 T 11-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC syc1560_d 423c01fad8bbcebdd1cd68d66fc6af39 81 Pfam PF01455 HupF/HypC family 1 71 1.1E-22 T 11-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC syc2259_c 14b8b94896aa1365e05eeccd84c739e2 208 Gene3D G3DSA:1.20.1540.10 22 199 1.7E-14 T 11-10-2018 IPR035952 Rhomboid-like superfamily syc2259_c 14b8b94896aa1365e05eeccd84c739e2 208 SUPERFAMILY SSF144091 27 194 1.03E-26 T 11-10-2018 syc2259_c 14b8b94896aa1365e05eeccd84c739e2 208 Pfam PF01694 Rhomboid family 58 194 2.3E-21 T 11-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 syc0685_c cad07db28dbd9453785efb2417f1ec97 419 SUPERFAMILY SSF52172 297 416 3.27E-32 T 11-10-2018 IPR011006 CheY-like superfamily syc0685_c cad07db28dbd9453785efb2417f1ec97 419 Pfam PF14332 Domain of unknown function (DUF4388) 22 181 1.1E-7 T 11-10-2018 IPR025497 Domain of unknown function DUF4388 syc0685_c cad07db28dbd9453785efb2417f1ec97 419 Gene3D G3DSA:3.40.50.12740 297 419 2.0E-31 T 11-10-2018 syc0685_c cad07db28dbd9453785efb2417f1ec97 419 Pfam PF00072 Response regulator receiver domain 300 411 3.2E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 syc0685_c cad07db28dbd9453785efb2417f1ec97 419 PIRSF PIRSF005897 10 419 1.3E-92 T 11-10-2018 IPR024186 Signal transduction response regulator, heterocyst pattern formation, PatA syc0685_c cad07db28dbd9453785efb2417f1ec97 419 SMART SM00448 298 411 1.6E-30 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 syc1610_d 6e59953a412697b408296e655ee2194a 399 Pfam PF13458 Periplasmic binding protein 41 390 5.7E-51 T 11-10-2018 IPR028081 Leucine-binding protein domain syc1610_d 6e59953a412697b408296e655ee2194a 399 Gene3D G3DSA:3.40.50.2300 157 289 2.4E-85 T 11-10-2018 syc1610_d 6e59953a412697b408296e655ee2194a 399 SUPERFAMILY SSF53822 43 392 2.36E-67 T 11-10-2018 IPR028082 Periplasmic binding protein-like I syc1610_d 6e59953a412697b408296e655ee2194a 399 Gene3D G3DSA:3.40.50.2300 44 349 2.4E-85 T 11-10-2018 syc0195_d d60e61306d95713a28c8368f19aad8f4 401 Pfam PF04422 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term 79 153 2.9E-23 T 11-10-2018 IPR007516 Coenzyme F420 hydrogenase/dehydrogenase beta subunit, N-terminal syc0195_d d60e61306d95713a28c8368f19aad8f4 401 Pfam PF04432 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus 162 307 4.7E-38 T 11-10-2018 IPR007525 Coenzyme F420 hydrogenase/dehydrogenase beta subunit, C-terminal syc1135_c 29a7d51b65e67deb61895d4c28494888 127 Pfam PF11317 Protein of unknown function (DUF3119) 14 125 9.9E-39 T 11-10-2018 IPR021467 Protein of unknown function DUF3119 syc2257_d 6c913681ebea0ae0e89c475f5cbdc0df 114 Pfam PF10792 Protein of unknown function (DUF2605) 8 102 5.9E-39 T 11-10-2018 IPR019728 Protein of unknown function DUF2605 syc2521_d c4bfd556fd9666ef050bdf80f87a804d 161 Gene3D G3DSA:1.10.1200.210 19 129 1.1E-37 T 11-10-2018 IPR038052 Chaperonin-like RbcX superfamily syc2521_d c4bfd556fd9666ef050bdf80f87a804d 161 Pfam PF02341 RbcX protein 19 128 2.4E-45 T 11-10-2018 IPR003435 Chaperonin-like RbcX syc2521_d c4bfd556fd9666ef050bdf80f87a804d 161 SUPERFAMILY SSF158615 23 135 1.24E-36 T 11-10-2018 IPR038052 Chaperonin-like RbcX superfamily syc1044_d b9bf425f745b3dd5c404890133d3615e 34 Pfam PF03742 PetN 1 29 3.4E-19 T 11-10-2018 IPR005497 Cytochrome b6-f complex, subunit 8 GO:0009512|GO:0017004|GO:0045158 syc1044_d b9bf425f745b3dd5c404890133d3615e 34 SUPERFAMILY SSF103451 1 28 6.54E-13 T 11-10-2018 IPR036143 Cytochrome b6-f complex, subunit 8 superfamily GO:0009512|GO:0017004|GO:0045158 syc1044_d b9bf425f745b3dd5c404890133d3615e 34 Hamap MF_00395 Cytochrome b6-f complex subunit 8 [petN]. 2 29 13.631 T 11-10-2018 IPR005497 Cytochrome b6-f complex, subunit 8 GO:0009512|GO:0017004|GO:0045158 syc1423_d 7c96a68c25a74854bf41cf4ea57af4d1 69 Pfam PF13275 S4 domain 4 64 9.6E-24 T 11-10-2018 syc1423_d 7c96a68c25a74854bf41cf4ea57af4d1 69 SMART SM00363 8 68 0.0062 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc1423_d 7c96a68c25a74854bf41cf4ea57af4d1 69 Gene3D G3DSA:3.10.290.10 2 64 6.7E-23 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 syc1423_d 7c96a68c25a74854bf41cf4ea57af4d1 69 SUPERFAMILY SSF55174 4 63 6.67E-18 T 11-10-2018 syc1149_c c53bfe6b7e439dea58003eb773c425c7 183 Gene3D G3DSA:2.40.128.20 19 183 3.2E-31 T 11-10-2018 IPR012674 Calycin syc1149_c c53bfe6b7e439dea58003eb773c425c7 183 Hamap MF_01459 Chromophore lyase CpcS/CpeS [cpcS]. 20 182 18.834 T 11-10-2018 IPR018536 Chromophore lyase CpcS/CpeS GO:0017009 syc1149_c c53bfe6b7e439dea58003eb773c425c7 183 Pfam PF09367 CpeS-like protein 22 181 5.3E-36 T 11-10-2018 IPR018536 Chromophore lyase CpcS/CpeS GO:0017009 syc0574_d 9ca4688cbb968d4c578ed0aae7e3e009 275 Gene3D G3DSA:3.40.50.1820 37 273 3.2E-61 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold syc0574_d 9ca4688cbb968d4c578ed0aae7e3e009 275 SUPERFAMILY SSF53474 42 273 1.87E-48 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold syc0574_d 9ca4688cbb968d4c578ed0aae7e3e009 275 Pfam PF01738 Dienelactone hydrolase family 53 273 4.1E-64 T 11-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 syc0489_c f03868ce8d7fbfc82092c441acaa57d1 310 Pfam PF07466 Protein of unknown function (DUF1517) 31 310 1.3E-115 T 11-10-2018 IPR010903 Protein of unknown function DUF1517 syc0489_c f03868ce8d7fbfc82092c441acaa57d1 310 PIRSF PIRSF037221 4 310 1.7E-104 T 11-10-2018 IPR010903 Protein of unknown function DUF1517 syc2431_d 3ff20c986acbc8fc0c4705c0ffed8026 720 Gene3D G3DSA:1.10.420.10 574 695 1.7E-150 T 11-10-2018 syc2431_d 3ff20c986acbc8fc0c4705c0ffed8026 720 Gene3D G3DSA:1.10.520.10 429 719 1.7E-150 T 11-10-2018 syc2431_d 3ff20c986acbc8fc0c4705c0ffed8026 720 ProSitePatterns PS00436 Peroxidases active site signature. 86 97 - T 11-10-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 syc2431_d 3ff20c986acbc8fc0c4705c0ffed8026 720 SUPERFAMILY SSF48113 428 719 1.77E-112 T 11-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 syc2431_d 3ff20c986acbc8fc0c4705c0ffed8026 720 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 48 61 2.3E-51 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 syc2431_d 3ff20c986acbc8fc0c4705c0ffed8026 720 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 63 88 2.3E-51 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 syc2431_d 3ff20c986acbc8fc0c4705c0ffed8026 720 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 474 500 2.3E-51 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 syc2431_d 3ff20c986acbc8fc0c4705c0ffed8026 720 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 263 286 2.3E-51 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 syc2431_d 3ff20c986acbc8fc0c4705c0ffed8026 720 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 22 44 2.3E-51 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 syc2431_d 3ff20c986acbc8fc0c4705c0ffed8026 720 Gene3D G3DSA:1.10.420.20 187 393 2.1E-219 T 11-10-2018 syc2431_d 3ff20c986acbc8fc0c4705c0ffed8026 720 Gene3D G3DSA:1.10.520.10 24 428 2.1E-219 T 11-10-2018 syc2431_d 3ff20c986acbc8fc0c4705c0ffed8026 720 PRINTS PR00458 Haem peroxidase superfamily signature 86 100 7.4E-18 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 syc2431_d 3ff20c986acbc8fc0c4705c0ffed8026 720 PRINTS PR00458 Haem peroxidase superfamily signature 164 176 7.4E-18 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 syc2431_d 3ff20c986acbc8fc0c4705c0ffed8026 720 PRINTS PR00458 Haem peroxidase superfamily signature 255 270 7.4E-18 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 syc2431_d 3ff20c986acbc8fc0c4705c0ffed8026 720 PRINTS PR00458 Haem peroxidase superfamily signature 146 163 7.4E-18 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 syc2431_d 3ff20c986acbc8fc0c4705c0ffed8026 720 PRINTS PR00458 Haem peroxidase superfamily signature 314 329 7.4E-18 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 syc2431_d 3ff20c986acbc8fc0c4705c0ffed8026 720 Pfam PF00141 Peroxidase 402 694 6.5E-38 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 syc2431_d 3ff20c986acbc8fc0c4705c0ffed8026 720 Pfam PF00141 Peroxidase 65 394 1.0E-49 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 syc2431_d 3ff20c986acbc8fc0c4705c0ffed8026 720 SUPERFAMILY SSF48113 15 427 6.48E-152 T 11-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 syc2431_d 3ff20c986acbc8fc0c4705c0ffed8026 720 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 7 719 0.0 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 syc2431_d 3ff20c986acbc8fc0c4705c0ffed8026 720 Hamap MF_01961 Catalase-peroxidase [katG]. 3 720 40.046 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 syc1820_d b217093b4abe39bd8c170091485f5423 310 SMART SM00028 136 169 1.5 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc1820_d b217093b4abe39bd8c170091485f5423 310 SMART SM00028 242 275 0.73 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc1820_d b217093b4abe39bd8c170091485f5423 310 SMART SM00028 102 135 170.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc1820_d b217093b4abe39bd8c170091485f5423 310 SMART SM00028 208 241 34.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc1820_d b217093b4abe39bd8c170091485f5423 310 SUPERFAMILY SSF48452 89 275 4.93E-20 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc1820_d b217093b4abe39bd8c170091485f5423 310 Gene3D G3DSA:1.25.40.10 75 283 3.4E-31 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc1820_d b217093b4abe39bd8c170091485f5423 310 Pfam PF13432 Tetratricopeptide repeat 212 274 1.5E-5 T 11-10-2018 syc1820_d b217093b4abe39bd8c170091485f5423 310 Pfam PF14559 Tetratricopeptide repeat 83 144 1.4E-5 T 11-10-2018 syc1820_d b217093b4abe39bd8c170091485f5423 310 Pfam PF14559 Tetratricopeptide repeat 148 200 3.2E-6 T 11-10-2018 syc0245_c 48741af8463b56845dced238ccb42ba7 337 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 332 7.6E-115 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 syc0245_c 48741af8463b56845dced238ccb42ba7 337 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 21 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 syc0245_c 48741af8463b56845dced238ccb42ba7 337 SUPERFAMILY SSF52374 4 332 7.19E-96 T 11-10-2018 syc0245_c 48741af8463b56845dced238ccb42ba7 337 Gene3D G3DSA:3.40.50.620 6 331 1.8E-135 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold syc0245_c 48741af8463b56845dced238ccb42ba7 337 Gene3D G3DSA:1.10.240.10 190 300 1.8E-135 T 11-10-2018 syc0245_c 48741af8463b56845dced238ccb42ba7 337 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 66 85 1.3E-27 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 syc0245_c 48741af8463b56845dced238ccb42ba7 337 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 1.3E-27 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 syc0245_c 48741af8463b56845dced238ccb42ba7 337 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 142 163 1.3E-27 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 syc0245_c 48741af8463b56845dced238ccb42ba7 337 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 199 209 1.3E-27 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 syc0245_c 48741af8463b56845dced238ccb42ba7 337 Pfam PF00579 tRNA synthetases class I (W and Y) 3 287 1.4E-87 T 11-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 syc0245_c 48741af8463b56845dced238ccb42ba7 337 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 333 41.58 T 11-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 syc1568_d 33e65bf5b68529f225bc36fe16dafd47 115 SUPERFAMILY SSF46626 1 112 8.05E-23 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 syc1568_d 33e65bf5b68529f225bc36fe16dafd47 115 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 28 104 3.6E-13 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 syc1568_d 33e65bf5b68529f225bc36fe16dafd47 115 PRINTS PR00605 Class IC cytochrome C signature 82 104 3.1E-7 T 11-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 syc1568_d 33e65bf5b68529f225bc36fe16dafd47 115 PRINTS PR00605 Class IC cytochrome C signature 39 50 3.1E-7 T 11-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 syc1568_d 33e65bf5b68529f225bc36fe16dafd47 115 Gene3D G3DSA:1.10.760.10 28 115 3.4E-33 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 syc1325_c 05104968714234b3f9536481bc9db2ab 535 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 434 451 2.9E-48 T 11-10-2018 syc1325_c 05104968714234b3f9536481bc9db2ab 535 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 276 295 2.9E-48 T 11-10-2018 syc1325_c 05104968714234b3f9536481bc9db2ab 535 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 409 424 2.9E-48 T 11-10-2018 syc1325_c 05104968714234b3f9536481bc9db2ab 535 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 149 168 2.9E-48 T 11-10-2018 syc1325_c 05104968714234b3f9536481bc9db2ab 535 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 246 262 2.9E-48 T 11-10-2018 syc1325_c 05104968714234b3f9536481bc9db2ab 535 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 356 374 2.9E-48 T 11-10-2018 syc1325_c 05104968714234b3f9536481bc9db2ab 535 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 131 149 2.9E-48 T 11-10-2018 syc1325_c 05104968714234b3f9536481bc9db2ab 535 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 54 79 2.9E-48 T 11-10-2018 syc1325_c 05104968714234b3f9536481bc9db2ab 535 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 378 396 2.9E-48 T 11-10-2018 syc1325_c 05104968714234b3f9536481bc9db2ab 535 Pfam PF01019 Gamma-glutamyltranspeptidase 48 530 6.2E-84 T 11-10-2018 syc1325_c 05104968714234b3f9536481bc9db2ab 535 Gene3D G3DSA:3.60.20.40 356 532 8.4E-37 T 11-10-2018 syc1325_c 05104968714234b3f9536481bc9db2ab 535 SUPERFAMILY SSF56235 25 531 5.21E-104 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal syc2252_c 3b3cff6b743c0b8ffbd20bbacf6d90e4 422 Pfam PF01385 Probable transposase 167 285 3.3E-15 T 11-10-2018 IPR001959 Probable transposase, IS891/IS1136/IS1341 syc2252_c 3b3cff6b743c0b8ffbd20bbacf6d90e4 422 Pfam PF07282 Putative transposase DNA-binding domain 299 367 2.1E-23 T 11-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal syc1062_c ee1fb505955f09b6f913370fcee87f4d 45 SUPERFAMILY SSF161037 9 45 1.16E-17 T 11-10-2018 IPR037270 Photosystem II PsbK superfamily GO:0015979 syc1062_c ee1fb505955f09b6f913370fcee87f4d 45 Hamap MF_00441 Photosystem II reaction center protein K [psbK]. 7 45 19.536 T 11-10-2018 IPR003687 Photosystem II PsbK GO:0009523|GO:0009539|GO:0015979 syc1062_c ee1fb505955f09b6f913370fcee87f4d 45 Pfam PF02533 Photosystem II 4 kDa reaction centre component 5 45 3.0E-26 T 11-10-2018 IPR003687 Photosystem II PsbK GO:0009523|GO:0009539|GO:0015979 syc0769_c fff07c7ae45df2cf26285e83408e4a29 198 Gene3D G3DSA:1.10.720.10 165 197 3.0E-5 T 11-10-2018 syc0769_c fff07c7ae45df2cf26285e83408e4a29 198 Pfam PF07498 Rho termination factor, N-terminal domain 167 197 7.9E-9 T 11-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 syc0141_d 9fc36c98bb85fce4a3c09167ccf45814 241 SUPERFAMILY SSF52540 8 229 1.46E-75 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0141_d 9fc36c98bb85fce4a3c09167ccf45814 241 Gene3D G3DSA:3.40.50.300 7 239 3.1E-70 T 11-10-2018 syc0141_d 9fc36c98bb85fce4a3c09167ccf45814 241 SMART SM00382 37 224 3.6E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain syc0141_d 9fc36c98bb85fce4a3c09167ccf45814 241 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 syc0141_d 9fc36c98bb85fce4a3c09167ccf45814 241 Pfam PF00005 ABC transporter 28 176 9.9E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 syc1579_c 23253e7077cea679fb7544869b3130f4 221 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 11-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 syc1579_c 23253e7077cea679fb7544869b3130f4 221 SUPERFAMILY SSF54713 57 199 1.44E-49 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 syc1579_c 23253e7077cea679fb7544869b3130f4 221 Hamap MF_00050 Elongation factor Ts [tsf]. 1 216 52.284 T 11-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 syc1579_c 23253e7077cea679fb7544869b3130f4 221 ProSitePatterns PS01127 Elongation factor Ts signature 2. 77 87 - T 11-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 syc1579_c 23253e7077cea679fb7544869b3130f4 221 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 97 2.1E-40 T 11-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 syc1579_c 23253e7077cea679fb7544869b3130f4 221 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 93 216 1.6E-30 T 11-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 syc1579_c 23253e7077cea679fb7544869b3130f4 221 Gene3D G3DSA:1.10.8.10 1 56 4.8E-29 T 11-10-2018 syc1579_c 23253e7077cea679fb7544869b3130f4 221 Gene3D G3DSA:3.30.479.20 60 198 6.7E-51 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 syc1579_c 23253e7077cea679fb7544869b3130f4 221 SUPERFAMILY SSF46934 4 55 2.69E-20 T 11-10-2018 IPR009060 UBA-like superfamily GO:0005515 syc1579_c 23253e7077cea679fb7544869b3130f4 221 Gene3D G3DSA:1.10.286.20 113 157 6.7E-51 T 11-10-2018 syc1579_c 23253e7077cea679fb7544869b3130f4 221 Pfam PF00889 Elongation factor TS 57 199 1.2E-32 T 11-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 syc1113_d b38b7aa7033621c0a32fd1b4e32fa7d1 174 SUPERFAMILY SSF55486 19 156 3.99E-36 T 11-10-2018 syc1113_d b38b7aa7033621c0a32fd1b4e32fa7d1 174 Pfam PF02130 Uncharacterized protein family UPF0054 43 152 1.2E-31 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 syc1113_d b38b7aa7033621c0a32fd1b4e32fa7d1 174 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 3 158 21.088 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 syc1113_d b38b7aa7033621c0a32fd1b4e32fa7d1 174 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 48 153 6.3E-31 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 syc1113_d b38b7aa7033621c0a32fd1b4e32fa7d1 174 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 124 134 - T 11-10-2018 IPR020549 Endoribonuclease YbeY, conserved site syc1113_d b38b7aa7033621c0a32fd1b4e32fa7d1 174 Gene3D G3DSA:3.40.390.30 2 161 6.8E-39 T 11-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 syc1474_d 3f10303acc68bc5947865f87887b2540 354 Pfam PF01699 Sodium/calcium exchanger protein 208 345 1.6E-20 T 11-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 syc1474_d 3f10303acc68bc5947865f87887b2540 354 Pfam PF01699 Sodium/calcium exchanger protein 31 181 1.1E-15 T 11-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 syc1474_d 3f10303acc68bc5947865f87887b2540 354 Gene3D G3DSA:1.20.58.1130 33 239 3.6E-23 T 11-10-2018 syc1474_d 3f10303acc68bc5947865f87887b2540 354 TIGRFAM TIGR00378 cax: calcium/proton exchanger 11 350 2.3E-116 T 11-10-2018 IPR004798 Calcium/proton exchanger CAX GO:0006816|GO:0015369 syc1474_d 3f10303acc68bc5947865f87887b2540 354 Gene3D G3DSA:1.20.1420.30 59 343 3.6E-23 T 11-10-2018 syc1505_d 982e1cc8bd35667c93cc8819fdc97d5a 218 SUPERFAMILY SSF160246 109 171 8.89E-8 T 11-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily syc1342_c 18e0739f444c5c624407ee1c504da075 139 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 23 118 4.3E-31 T 11-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS syc1342_c 18e0739f444c5c624407ee1c504da075 139 Pfam PF02410 Ribosomal silencing factor during starvation 23 118 4.5E-24 T 11-10-2018 syc1342_c 18e0739f444c5c624407ee1c504da075 139 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 12 119 24.222 T 11-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS syc1342_c 18e0739f444c5c624407ee1c504da075 139 SUPERFAMILY SSF81301 18 128 4.25E-36 T 11-10-2018 syc1342_c 18e0739f444c5c624407ee1c504da075 139 Gene3D G3DSA:3.30.460.10 12 122 1.1E-35 T 11-10-2018 syc0817_d 18843508eaad3ac22f0e9da737e47cd3 407 Pfam PF04551 GcpE protein 23 395 2.0E-143 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 syc0817_d 18843508eaad3ac22f0e9da737e47cd3 407 Gene3D G3DSA:3.30.413.10 304 400 4.9E-29 T 11-10-2018 syc0817_d 18843508eaad3ac22f0e9da737e47cd3 407 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 18 399 40.451 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 syc0817_d 18843508eaad3ac22f0e9da737e47cd3 407 SUPERFAMILY SSF56014 306 395 1.57E-10 T 11-10-2018 syc0817_d 18843508eaad3ac22f0e9da737e47cd3 407 PIRSF PIRSF004640 12 402 1.4E-130 T 11-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 syc0817_d 18843508eaad3ac22f0e9da737e47cd3 407 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 20 395 4.9E-155 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 syc0817_d 18843508eaad3ac22f0e9da737e47cd3 407 Gene3D G3DSA:3.20.20.20 17 303 1.4E-104 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 syc0304_c 58b8aafc7a1abbc2614542a3d311c9fc 504 Gene3D G3DSA:3.90.660.50 182 441 3.3E-20 T 11-10-2018 syc0304_c 58b8aafc7a1abbc2614542a3d311c9fc 504 Pfam PF01593 Flavin containing amine oxidoreductase 19 422 3.1E-18 T 11-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 syc0304_c 58b8aafc7a1abbc2614542a3d311c9fc 504 SUPERFAMILY SSF51905 10 501 3.89E-63 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc0304_c 58b8aafc7a1abbc2614542a3d311c9fc 504 TIGRFAM TIGR02730 carot_isom: carotene isomerase 10 502 2.7E-286 T 11-10-2018 IPR014101 Prolycopene isomerase GO:0016117|GO:0046608 KEGG: 00906+5.2.1.13|MetaCyc: PWY-6475 syc0304_c 58b8aafc7a1abbc2614542a3d311c9fc 504 Gene3D G3DSA:3.50.50.60 10 101 1.3E-16 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc0304_c 58b8aafc7a1abbc2614542a3d311c9fc 504 Gene3D G3DSA:3.50.50.60 231 477 3.3E-20 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc1677_d d5cc79423effe8b7262dd84867d934a5 216 Pfam PF01618 MotA/TolQ/ExbB proton channel family 68 188 4.7E-32 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel syc2338_d fff650c005fe5f621d0b0edb9d1b6d18 154 Pfam PF00583 Acetyltransferase (GNAT) family 32 143 2.4E-17 T 11-10-2018 IPR000182 GNAT domain syc2338_d fff650c005fe5f621d0b0edb9d1b6d18 154 SUPERFAMILY SSF55729 15 146 4.39E-25 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase syc2338_d fff650c005fe5f621d0b0edb9d1b6d18 154 Gene3D G3DSA:3.40.630.30 9 150 1.2E-27 T 11-10-2018 syc0425_c 257352068ca84f7acf057a6512896511 670 SUPERFAMILY SSF50249 217 599 1.07E-108 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold syc0425_c 257352068ca84f7acf057a6512896511 670 SMART SM00955 264 556 7.9E-108 T 11-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 syc0425_c 257352068ca84f7acf057a6512896511 670 Pfam PF00773 RNB domain 264 555 2.8E-77 T 11-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 syc0425_c 257352068ca84f7acf057a6512896511 670 Gene3D G3DSA:1.10.10.10 180 243 1.3E-6 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily syc1175_c c070499d60a507f61b0d2e1518d70736 105 Gene3D G3DSA:3.10.20.30 1 103 2.1E-30 T 11-10-2018 IPR012675 Beta-grasp domain superfamily syc1175_c c070499d60a507f61b0d2e1518d70736 105 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 11 82 6.1E-15 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 syc1175_c c070499d60a507f61b0d2e1518d70736 105 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 40 48 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 syc1175_c c070499d60a507f61b0d2e1518d70736 105 SUPERFAMILY SSF54292 3 102 3.8E-30 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 syc1175_c c070499d60a507f61b0d2e1518d70736 105 TIGRFAM TIGR02008 fdx_plant: ferredoxin [2Fe-2S] 2 97 4.3E-29 T 11-10-2018 IPR010241 Ferredoxin [2Fe-2S], plant GO:0009055|GO:0022900|GO:0051537 syc2312_d 63d4a010c286b23d05358a0ecc2b080e 91 TIGRFAM TIGR01687 moaD_arch: MoaD family protein 13 91 6.4E-14 T 11-10-2018 IPR010038 MoaD, archaeal-type syc2312_d 63d4a010c286b23d05358a0ecc2b080e 91 Pfam PF02597 ThiS family 5 91 2.3E-17 T 11-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 syc2312_d 63d4a010c286b23d05358a0ecc2b080e 91 Gene3D G3DSA:3.10.20.30 1 91 9.4E-30 T 11-10-2018 IPR012675 Beta-grasp domain superfamily syc2312_d 63d4a010c286b23d05358a0ecc2b080e 91 SUPERFAMILY SSF54285 1 91 3.36E-26 T 11-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp syc0997_d fbf2d1517a241d64cf0077041b0537d3 122 Gene3D G3DSA:3.10.450.50 12 119 2.9E-19 T 11-10-2018 syc0997_d fbf2d1517a241d64cf0077041b0537d3 122 Pfam PF07366 SnoaL-like polyketide cyclase 49 117 1.6E-15 T 11-10-2018 IPR009959 Polyketide cyclase SnoaL-like GO:0030638 MetaCyc: PWY-7352|MetaCyc: PWY-7354 syc0997_d fbf2d1517a241d64cf0077041b0537d3 122 SUPERFAMILY SSF54427 15 120 8.04E-21 T 11-10-2018 IPR032710 NTF2-like domain superfamily syc1144_c 9b0c302beb59fe7d8b0b46fafe1a54f1 484 Pfam PF01593 Flavin containing amine oxidoreductase 46 480 2.1E-68 T 11-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 syc1144_c 9b0c302beb59fe7d8b0b46fafe1a54f1 484 Gene3D G3DSA:3.50.50.60 30 484 9.3E-148 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc1144_c 9b0c302beb59fe7d8b0b46fafe1a54f1 484 SUPERFAMILY SSF54373 321 429 2.35E-26 T 11-10-2018 syc1144_c 9b0c302beb59fe7d8b0b46fafe1a54f1 484 SUPERFAMILY SSF51905 34 481 7.77E-73 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc1144_c 9b0c302beb59fe7d8b0b46fafe1a54f1 484 PRINTS PR00757 Flavin-containing amine oxidase signature 410 429 1.7E-28 T 11-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 syc1144_c 9b0c302beb59fe7d8b0b46fafe1a54f1 484 PRINTS PR00757 Flavin-containing amine oxidase signature 206 227 1.7E-28 T 11-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 syc1144_c 9b0c302beb59fe7d8b0b46fafe1a54f1 484 PRINTS PR00757 Flavin-containing amine oxidase signature 229 251 1.7E-28 T 11-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 syc1144_c 9b0c302beb59fe7d8b0b46fafe1a54f1 484 PRINTS PR00757 Flavin-containing amine oxidase signature 462 479 1.7E-28 T 11-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 syc1144_c 9b0c302beb59fe7d8b0b46fafe1a54f1 484 PRINTS PR00757 Flavin-containing amine oxidase signature 325 344 1.7E-28 T 11-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 syc1144_c 9b0c302beb59fe7d8b0b46fafe1a54f1 484 PRINTS PR00757 Flavin-containing amine oxidase signature 37 56 1.7E-28 T 11-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 syc1144_c 9b0c302beb59fe7d8b0b46fafe1a54f1 484 PRINTS PR00757 Flavin-containing amine oxidase signature 431 453 1.7E-28 T 11-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 syc0406_c 5d433920745da8266573ddd32b4829d4 343 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 12 172 2.9E-15 T 11-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related syc0406_c 5d433920745da8266573ddd32b4829d4 343 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 10 173 6.2E-22 T 11-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 syc0333_d 9bc271d7369a2857ab5d298ac383a6a3 102 Gene3D G3DSA:3.40.30.10 1 102 3.1E-43 T 11-10-2018 syc0333_d 9bc271d7369a2857ab5d298ac383a6a3 102 Hamap MF_01835 Circadian clock protein KaiB [kaiB]. 1 101 34.463 T 11-10-2018 IPR013474 Circadian clock protein KaiB GO:0007623|GO:0042326 syc0333_d 9bc271d7369a2857ab5d298ac383a6a3 102 SUPERFAMILY SSF52833 3 94 9.3E-29 T 11-10-2018 IPR036249 Thioredoxin-like superfamily syc0333_d 9bc271d7369a2857ab5d298ac383a6a3 102 Pfam PF07689 KaiB domain 10 90 2.6E-28 T 11-10-2018 IPR011649 KaiB domain GO:0048511 syc0333_d 9bc271d7369a2857ab5d298ac383a6a3 102 TIGRFAM TIGR02654 circ_KaiB: circadian clock protein KaiB 4 90 1.0E-54 T 11-10-2018 IPR013474 Circadian clock protein KaiB GO:0007623|GO:0042326 syc0333_d 9bc271d7369a2857ab5d298ac383a6a3 102 SMART SM01248 10 91 7.4E-45 T 11-10-2018 IPR011649 KaiB domain GO:0048511 syc1002_c 09103b7c346db9ba93ae16bb9d191060 387 Pfam PF01594 AI-2E family transporter 6 348 1.8E-62 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like syc2193_d 2b476a466001691eae65ee994251180c 348 Pfam PF00534 Glycosyl transferases group 1 176 315 3.4E-29 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 syc2193_d 2b476a466001691eae65ee994251180c 348 Gene3D G3DSA:3.40.50.2000 153 344 5.3E-36 T 11-10-2018 syc2193_d 2b476a466001691eae65ee994251180c 348 SUPERFAMILY SSF53756 2 345 9.42E-48 T 11-10-2018 syc2193_d 2b476a466001691eae65ee994251180c 348 Gene3D G3DSA:3.40.50.2000 155 329 5.3E-36 T 11-10-2018 syc1552_c c1296ef5f827670076d7649adc490610 388 Pfam PF00266 Aminotransferase class-V 6 366 1.3E-79 T 11-10-2018 IPR000192 Aminotransferase class V domain syc1552_c c1296ef5f827670076d7649adc490610 388 PIRSF PIRSF005572 3 382 3.7E-128 T 11-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 syc1552_c c1296ef5f827670076d7649adc490610 388 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 196 215 - T 11-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site syc1552_c c1296ef5f827670076d7649adc490610 388 SUPERFAMILY SSF53383 3 376 5.0E-102 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase syc1552_c c1296ef5f827670076d7649adc490610 388 Gene3D G3DSA:3.90.1150.10 6 373 2.4E-147 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 syc1552_c c1296ef5f827670076d7649adc490610 388 Gene3D G3DSA:3.40.640.10 17 259 2.4E-147 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 syc1320_c 927023be2c30ca0260f57d335e2a55bd 382 SUPERFAMILY SSF53383 3 363 3.17E-104 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase syc1320_c 927023be2c30ca0260f57d335e2a55bd 382 Gene3D G3DSA:3.40.640.10 16 260 4.9E-135 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 syc1320_c 927023be2c30ca0260f57d335e2a55bd 382 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 184 204 - T 11-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site syc1320_c 927023be2c30ca0260f57d335e2a55bd 382 Pfam PF00266 Aminotransferase class-V 6 330 1.1E-59 T 11-10-2018 IPR000192 Aminotransferase class V domain syc1320_c 927023be2c30ca0260f57d335e2a55bd 382 PIRSF PIRSF000524 1 382 4.3E-141 T 11-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 syc1320_c 927023be2c30ca0260f57d335e2a55bd 382 Gene3D G3DSA:3.90.1150.10 11 373 4.9E-135 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 syc0364_c 3be73b99cd3ba8be3edf9f2917d445cd 232 SUPERFAMILY SSF53597 3 216 3.12E-38 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 syc0364_c 3be73b99cd3ba8be3edf9f2917d445cd 232 Pfam PF01872 RibD C-terminal domain 3 210 1.6E-30 T 11-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 syc0364_c 3be73b99cd3ba8be3edf9f2917d445cd 232 Gene3D G3DSA:3.40.430.10 1 225 1.3E-43 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 syc1537_d 3be0d15b3e7b8dca067f4c06c1ceddcc 276 Pfam PF00950 ABC 3 transport family 9 266 2.2E-76 T 11-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 syc1537_d 3be0d15b3e7b8dca067f4c06c1ceddcc 276 SUPERFAMILY SSF81345 5 264 5.23E-43 T 11-10-2018 IPR037294 ABC transporter, BtuC-like syc1537_d 3be0d15b3e7b8dca067f4c06c1ceddcc 276 Gene3D G3DSA:1.10.3470.10 11 272 7.6E-9 T 11-10-2018 IPR037294 ABC transporter, BtuC-like syc2213_d 1a417560421fa07f8c20c1b0cf0d8ebb 136 SUPERFAMILY SSF81585 46 136 4.12E-21 T 11-10-2018 syc2213_d 1a417560421fa07f8c20c1b0cf0d8ebb 136 Pfam PF06514 Photosystem II 12 kDa extrinsic protein (PsbU) 45 135 1.0E-39 T 11-10-2018 IPR010527 Photosystem II PsbU, oxygen evolving complex GO:0009523|GO:0009654|GO:0015979|GO:0019898|GO:0042549 syc2213_d 1a417560421fa07f8c20c1b0cf0d8ebb 136 Hamap MF_00589 Photosystem II 12 kDa extrinsic protein [psbU]. 1 136 31.688 T 11-10-2018 IPR010527 Photosystem II PsbU, oxygen evolving complex GO:0009523|GO:0009654|GO:0015979|GO:0019898|GO:0042549 syc2213_d 1a417560421fa07f8c20c1b0cf0d8ebb 136 Gene3D G3DSA:1.10.150.320 36 125 3.9E-27 T 11-10-2018 syc0796_c f96a56dd3c060e5b6ecb5995d9ef9b7b 109 PIRSF PIRSF030771 1 106 1.6E-16 T 11-10-2018 IPR011231 Bacteriophage VT1-Sakai, H0018 syc0796_c f96a56dd3c060e5b6ecb5995d9ef9b7b 109 Pfam PF09956 Uncharacterized conserved protein (DUF2190) 1 104 3.7E-34 T 11-10-2018 IPR011231 Bacteriophage VT1-Sakai, H0018 syc2066_c 5d46c17b7431d509a30b9cb3db68f421 528 Gene3D G3DSA:3.40.50.10490 390 451 1.7E-10 T 11-10-2018 syc2066_c 5d46c17b7431d509a30b9cb3db68f421 528 Gene3D G3DSA:3.40.50.10490 257 385 1.5E-34 T 11-10-2018 syc2066_c 5d46c17b7431d509a30b9cb3db68f421 528 Gene3D G3DSA:3.40.50.10490 72 256 6.0E-48 T 11-10-2018 syc2066_c 5d46c17b7431d509a30b9cb3db68f421 528 PRINTS PR00662 Glucose-6-phosphate isomerase signature 305 326 3.6E-32 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc2066_c 5d46c17b7431d509a30b9cb3db68f421 528 PRINTS PR00662 Glucose-6-phosphate isomerase signature 438 451 3.6E-32 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc2066_c 5d46c17b7431d509a30b9cb3db68f421 528 PRINTS PR00662 Glucose-6-phosphate isomerase signature 117 136 3.6E-32 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc2066_c 5d46c17b7431d509a30b9cb3db68f421 528 PRINTS PR00662 Glucose-6-phosphate isomerase signature 229 247 3.6E-32 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc2066_c 5d46c17b7431d509a30b9cb3db68f421 528 PRINTS PR00662 Glucose-6-phosphate isomerase signature 424 438 3.6E-32 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc2066_c 5d46c17b7431d509a30b9cb3db68f421 528 PRINTS PR00662 Glucose-6-phosphate isomerase signature 406 424 3.6E-32 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc2066_c 5d46c17b7431d509a30b9cb3db68f421 528 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 24 465 27.182 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc2066_c 5d46c17b7431d509a30b9cb3db68f421 528 SUPERFAMILY SSF53697 5 465 1.98E-136 T 11-10-2018 syc2066_c 5d46c17b7431d509a30b9cb3db68f421 528 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 438 455 - T 11-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc2066_c 5d46c17b7431d509a30b9cb3db68f421 528 Pfam PF00342 Phosphoglucose isomerase 52 375 7.5E-50 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc2066_c 5d46c17b7431d509a30b9cb3db68f421 528 Pfam PF00342 Phosphoglucose isomerase 403 463 3.6E-8 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc1469_c 799b78edca2d5cb1b799ea80c2976f79 217 Gene3D G3DSA:3.40.50.1820 1 213 2.4E-11 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold syc1469_c 799b78edca2d5cb1b799ea80c2976f79 217 SUPERFAMILY SSF53474 1 215 2.87E-16 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold syc1285_c 10eff822d9f17a83c592a45a18cb9695 86 Pfam PF11344 Protein of unknown function (DUF3146) 6 84 1.5E-40 T 11-10-2018 IPR021492 Protein of unknown function DUF3146 syc1261_d 54f3aace1ec778ff9bd4f365d38545eb 75 Pfam PF02672 CP12 domain 5 74 2.6E-27 T 11-10-2018 IPR003823 Domain of unknown function CP12 syc1261_d 54f3aace1ec778ff9bd4f365d38545eb 75 SMART SM01093 5 75 1.8E-38 T 11-10-2018 IPR003823 Domain of unknown function CP12 syc1811_d 77f12747fd5d915cda6926e595a257a1 284 Pfam PF00793 DAHP synthetase I family 14 269 2.5E-64 T 11-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 syc1811_d 77f12747fd5d915cda6926e595a257a1 284 SUPERFAMILY SSF51569 14 277 1.19E-102 T 11-10-2018 syc1811_d 77f12747fd5d915cda6926e595a257a1 284 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 17 279 51.708 T 11-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 syc1811_d 77f12747fd5d915cda6926e595a257a1 284 Gene3D G3DSA:3.20.20.70 6 280 2.8E-100 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 syc1811_d 77f12747fd5d915cda6926e595a257a1 284 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 23 276 5.4E-123 T 11-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 syc1715_c 89231450f8d7d582fb45280fd32d7dbf 1218 Pfam PF01968 Hydantoinase/oxoprolinase 212 502 5.7E-104 T 11-10-2018 IPR002821 Hydantoinase A/oxoprolinase GO:0016787 Reactome: R-HSA-174403|Reactome: R-HSA-5578998 syc1715_c 89231450f8d7d582fb45280fd32d7dbf 1218 Pfam PF05378 Hydantoinase/oxoprolinase N-terminal region 13 192 1.6E-59 T 11-10-2018 IPR008040 Hydantoinaseoxoprolinase, N-terminal Reactome: R-HSA-174403|Reactome: R-HSA-5578998 syc1715_c 89231450f8d7d582fb45280fd32d7dbf 1218 Pfam PF02538 Hydantoinase B/oxoprolinase 706 1217 5.9E-200 T 11-10-2018 IPR003692 Hydantoinase B/oxoprolinase GO:0003824 Reactome: R-HSA-174403|Reactome: R-HSA-5578998 syc1617_c 8dc5eba66a0f3ee3b9e78939af1c3557 78 Pfam PF01724 Domain of unknown function DUF29 2 77 7.5E-14 T 11-10-2018 IPR002636 Protein from unkown function DUF29 syc1617_c 8dc5eba66a0f3ee3b9e78939af1c3557 78 Gene3D G3DSA:1.20.1220.20 1 75 1.9E-5 T 11-10-2018 syc2177_c 3de46f799ee71b02091e2e46c2670d8b 364 SUPERFAMILY SSF103481 231 336 1.96E-12 T 11-10-2018 syc2177_c 3de46f799ee71b02091e2e46c2670d8b 364 Pfam PF00892 EamA-like transporter family 23 151 8.9E-24 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 syc2177_c 3de46f799ee71b02091e2e46c2670d8b 364 Pfam PF00892 EamA-like transporter family 198 332 7.6E-26 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 syc2177_c 3de46f799ee71b02091e2e46c2670d8b 364 SUPERFAMILY SSF103481 54 155 1.83E-16 T 11-10-2018 syc0301_d 5375e37dad62f7e3b798dd74dd3030f9 44 Pfam PF01701 Photosystem I reaction centre subunit IX / PsaJ 4 40 4.2E-22 T 11-10-2018 IPR002615 Photosystem I PsaJ, reaction centre subunit IX GO:0009522|GO:0015979 syc0301_d 5375e37dad62f7e3b798dd74dd3030f9 44 SUPERFAMILY SSF81544 4 44 7.45E-18 T 11-10-2018 IPR036062 Photosystem I PsaJ, reaction centre subunit IX superfamily GO:0009522|GO:0015979 syc0301_d 5375e37dad62f7e3b798dd74dd3030f9 44 ProDom PD004198 PHOTOSYSTEM I SUBUNIT IX REACTION CENTER CHLOROPLAST MEMBRANE TRANSMEMBRANE PHOTOSYNTHESIS 10 40 2.0E-10 T 11-10-2018 IPR002615 Photosystem I PsaJ, reaction centre subunit IX GO:0009522|GO:0015979 syc0301_d 5375e37dad62f7e3b798dd74dd3030f9 44 Hamap MF_00522 Photosystem I reaction center subunit IX [psaJ]. 4 44 18.673 T 11-10-2018 IPR002615 Photosystem I PsaJ, reaction centre subunit IX GO:0009522|GO:0015979 syc0301_d 5375e37dad62f7e3b798dd74dd3030f9 44 Gene3D G3DSA:1.20.5.510 4 43 2.7E-24 T 11-10-2018 syc0152_d 11bd401a10198c3e3384777259311d8e 223 SMART SM00849 1 141 3.2E-24 T 11-10-2018 IPR001279 Metallo-beta-lactamase syc0152_d 11bd401a10198c3e3384777259311d8e 223 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 1 223 3.7E-88 T 11-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 syc0152_d 11bd401a10198c3e3384777259311d8e 223 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 142 223 4.5E-27 T 11-10-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 syc0152_d 11bd401a10198c3e3384777259311d8e 223 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 1 223 34.074 T 11-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 syc0152_d 11bd401a10198c3e3384777259311d8e 223 PIRSF PIRSF005457 1 223 3.7E-87 T 11-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 syc0152_d 11bd401a10198c3e3384777259311d8e 223 Gene3D G3DSA:3.60.15.10 1 223 3.4E-76 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like syc0152_d 11bd401a10198c3e3384777259311d8e 223 SUPERFAMILY SSF56281 1 223 5.32E-62 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like syc0152_d 11bd401a10198c3e3384777259311d8e 223 Pfam PF00753 Metallo-beta-lactamase superfamily 2 141 1.4E-13 T 11-10-2018 IPR001279 Metallo-beta-lactamase syc2135_d a2f4802b8179c8481d8da5e36fbe686d 168 Pfam PF09654 Protein of unknown function (DUF2396) 9 166 1.9E-77 T 11-10-2018 IPR013472 Conserved hypothetical protein CHP02652 syc2135_d a2f4802b8179c8481d8da5e36fbe686d 168 TIGRFAM TIGR02652 TIGR02652: TIGR02652 family protein 7 168 2.7E-94 T 11-10-2018 IPR013472 Conserved hypothetical protein CHP02652 syc0305_c 499fb0e7d10de4454185bdb7ee7e9015 103 Pfam PF09821 C-terminal AAA-associated domain 1 86 4.8E-18 T 11-10-2018 IPR018632 C-terminal AAA-associated domain syc0208_c ad806d77470df66956f9a3e55dfc4688 201 Gene3D G3DSA:1.20.120.1200 8 170 1.3E-40 T 11-10-2018 syc0208_c ad806d77470df66956f9a3e55dfc4688 201 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 23 166 1.9E-36 T 11-10-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc0834_d aa5b6d322a2ae66890f3724ae5fbd05a 31 Hamap MF_00808 Photosystem II reaction center protein T [psbT]. 1 31 15.389 T 11-10-2018 IPR001743 Photosystem II PsbT GO:0009523|GO:0009539|GO:0015979|GO:0016020 syc0834_d aa5b6d322a2ae66890f3724ae5fbd05a 31 Pfam PF01405 Photosystem II reaction centre T protein 1 29 3.0E-18 T 11-10-2018 IPR001743 Photosystem II PsbT GO:0009523|GO:0009539|GO:0015979|GO:0016020 syc0834_d aa5b6d322a2ae66890f3724ae5fbd05a 31 SUPERFAMILY SSF161029 1 29 2.62E-12 T 11-10-2018 IPR037268 Photosystem II PsbT superfamily GO:0015979 syc1415_d baac631df85eac3da3f46f713034f00f 244 Pfam PF01738 Dienelactone hydrolase family 19 241 1.5E-58 T 11-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 syc1415_d baac631df85eac3da3f46f713034f00f 244 SUPERFAMILY SSF53474 6 240 1.84E-45 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold syc1415_d baac631df85eac3da3f46f713034f00f 244 Gene3D G3DSA:3.40.50.1820 7 241 3.2E-51 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold syc0788_c 9b4241b348245126f714c8d44350ba7d 671 Pfam PF16075 Domain of unknown function (DUF4815) 6 577 2.8E-237 T 11-10-2018 IPR032096 Domain of unknown function DUF4815 syc1271_d d30e52921bdb7156c37db0cb2f29c114 370 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 9 319 5.8E-89 T 11-10-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 syc1271_d d30e52921bdb7156c37db0cb2f29c114 370 Gene3D G3DSA:1.20.1420.30 42 316 4.9E-92 T 11-10-2018 syc1271_d d30e52921bdb7156c37db0cb2f29c114 370 Gene3D G3DSA:1.20.58.1130 16 213 4.9E-92 T 11-10-2018 syc1271_d d30e52921bdb7156c37db0cb2f29c114 370 Pfam PF01699 Sodium/calcium exchanger protein 182 319 5.1E-29 T 11-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 syc1271_d d30e52921bdb7156c37db0cb2f29c114 370 Pfam PF01699 Sodium/calcium exchanger protein 12 151 3.8E-31 T 11-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 syc1168_d fbc858fd97d269d1e8df57a290aeb3af 256 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 20 222 2.6E-43 T 11-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 syc1168_d fbc858fd97d269d1e8df57a290aeb3af 256 SUPERFAMILY SSF55681 13 197 8.78E-43 T 11-10-2018 syc1168_d fbc858fd97d269d1e8df57a290aeb3af 256 Gene3D G3DSA:3.30.930.10 4 197 5.0E-41 T 11-10-2018 syc1168_d fbc858fd97d269d1e8df57a290aeb3af 256 Pfam PF03099 Biotin/lipoate A/B protein ligase family 23 141 6.1E-16 T 11-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 syc0413_d ad52c1fd105fbaf902575ba2a92c879c 248 Gene3D G3DSA:3.20.20.70 9 243 3.2E-7 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 syc0413_d ad52c1fd105fbaf902575ba2a92c879c 248 Pfam PF04481 Protein of unknown function (DUF561) 7 241 5.7E-89 T 11-10-2018 IPR007570 Uncharacterised protein family Ycf23 syc0413_d ad52c1fd105fbaf902575ba2a92c879c 248 SUPERFAMILY SSF51569 25 221 1.83E-20 T 11-10-2018 syc1290_c 58115444a8b41e00bf3414270336d07f 288 SUPERFAMILY SSF51735 1 279 1.49E-32 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily syc1290_c 58115444a8b41e00bf3414270336d07f 288 Gene3D G3DSA:3.40.50.720 1 281 1.7E-96 T 11-10-2018 syc1983_c a0f7b580f6209c37b14f7d99f341ba6b 591 Pfam PF00005 ABC transporter 365 512 1.7E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 syc1983_c a0f7b580f6209c37b14f7d99f341ba6b 591 Gene3D G3DSA:1.20.1560.10 2 332 5.2E-75 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 syc1983_c a0f7b580f6209c37b14f7d99f341ba6b 591 ProSitePatterns PS00211 ABC transporters family signature. 484 498 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 syc1983_c a0f7b580f6209c37b14f7d99f341ba6b 591 SMART SM00382 372 558 1.1E-19 T 11-10-2018 IPR003593 AAA+ ATPase domain syc1983_c a0f7b580f6209c37b14f7d99f341ba6b 591 Gene3D G3DSA:3.40.50.300 339 589 6.7E-93 T 11-10-2018 syc1983_c a0f7b580f6209c37b14f7d99f341ba6b 591 Pfam PF00664 ABC transporter transmembrane region 22 295 4.2E-38 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 syc1983_c a0f7b580f6209c37b14f7d99f341ba6b 591 SUPERFAMILY SSF52540 339 582 4.83E-94 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc1983_c a0f7b580f6209c37b14f7d99f341ba6b 591 SUPERFAMILY SSF90123 7 328 7.98E-68 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 syc0389_c 8604691499a82f746af22a13f34278d1 164 Pfam PF04657 Putative inner membrane exporter, YdcZ 20 157 2.1E-34 T 11-10-2018 IPR006750 Putative inner membrane exporter, YdcZ syc2002_c f13365a307c8d04942bf05424399cd73 612 TIGRFAM TIGR01960 ndhF3_CO2: NAD(P)H dehydrogenase, subunit NdhF3 family 1 594 7.1E-232 T 11-10-2018 IPR010217 NAD(P)H dehydrogenase, subunit NdhF3 syc2002_c f13365a307c8d04942bf05424399cd73 612 Pfam PF00361 Proton-conducting membrane transporter 138 418 1.2E-50 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc2002_c f13365a307c8d04942bf05424399cd73 612 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 226 247 6.7E-23 T 11-10-2018 syc2002_c f13365a307c8d04942bf05424399cd73 612 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 85 110 6.7E-23 T 11-10-2018 syc2002_c f13365a307c8d04942bf05424399cd73 612 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 315 327 6.7E-23 T 11-10-2018 syc2002_c f13365a307c8d04942bf05424399cd73 612 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 113 133 6.7E-23 T 11-10-2018 syc2002_c f13365a307c8d04942bf05424399cd73 612 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 160 181 6.7E-23 T 11-10-2018 syc2002_c f13365a307c8d04942bf05424399cd73 612 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 68 124 6.8E-12 T 11-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc1338_c b3c5fb6534bb608876012471dee67cf9 723 SMART SM01230 192 477 2.9E-52 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 syc1338_c b3c5fb6534bb608876012471dee67cf9 723 Gene3D G3DSA:1.20.120.1560 586 723 2.9E-34 T 11-10-2018 syc1338_c b3c5fb6534bb608876012471dee67cf9 723 Pfam PF12437 Glutamine synthetase type III N terminal 30 191 1.5E-71 T 11-10-2018 IPR022147 Glutamine synthetase type III N-terminal GO:0004356 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 syc1338_c b3c5fb6534bb608876012471dee67cf9 723 SUPERFAMILY SSF55931 183 604 2.75E-74 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 syc1338_c b3c5fb6534bb608876012471dee67cf9 723 Pfam PF00120 Glutamine synthetase, catalytic domain 200 384 9.1E-22 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 syc1338_c b3c5fb6534bb608876012471dee67cf9 723 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 337 352 - T 11-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 syc1338_c b3c5fb6534bb608876012471dee67cf9 723 Gene3D G3DSA:3.30.590.10 198 431 9.5E-30 T 11-10-2018 syc2343_d cebd7a08d3b75fcce741c69a53a3b4f6 253 Pfam PF08241 Methyltransferase domain 41 128 1.2E-14 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 syc2343_d cebd7a08d3b75fcce741c69a53a3b4f6 253 Gene3D G3DSA:1.10.10.2560 134 233 2.8E-89 T 11-10-2018 syc2343_d cebd7a08d3b75fcce741c69a53a3b4f6 253 SUPERFAMILY SSF53335 4 217 1.01E-31 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase syc2343_d cebd7a08d3b75fcce741c69a53a3b4f6 253 Gene3D G3DSA:3.40.50.150 18 243 2.8E-89 T 11-10-2018 syc1987_d c78a2a0471f5ff09f9bc65924e98b0fd 263 Gene3D G3DSA:1.10.3720.10 67 254 4.5E-24 T 11-10-2018 IPR035906 MetI-like superfamily syc1987_d c78a2a0471f5ff09f9bc65924e98b0fd 263 SUPERFAMILY SSF161098 68 247 4.58E-30 T 11-10-2018 IPR035906 MetI-like superfamily syc1987_d c78a2a0471f5ff09f9bc65924e98b0fd 263 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 246 2.8E-21 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 syc1451_d b782d2bf46244349f4f7e7f14c961cc0 144 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 25 47 2.3E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site syc1451_d b782d2bf46244349f4f7e7f14c961cc0 144 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 25 45 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site syc1451_d b782d2bf46244349f4f7e7f14c961cc0 144 Pfam PF07963 Prokaryotic N-terminal methylation motif 24 47 1.0E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site syc1451_d b782d2bf46244349f4f7e7f14c961cc0 144 SUPERFAMILY SSF54523 27 113 1.26E-15 T 11-10-2018 syc1451_d b782d2bf46244349f4f7e7f14c961cc0 144 Gene3D G3DSA:3.30.700.10 27 143 6.6E-18 T 11-10-2018 syc1093_c b970b5f501954844e54b27c6614cff84 360 Pfam PF00124 Photosynthetic reaction centre protein 28 326 1.2E-95 T 11-10-2018 IPR000484 Photosynthetic reaction centre, L/M GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 syc1093_c b970b5f501954844e54b27c6614cff84 360 Hamap MF_01379 Photosystem II protein D1 [psbA]. 1 347 59.789 T 11-10-2018 IPR005867 Photosystem II protein D1 GO:0009055 MetaCyc: PWY-101 syc1093_c b970b5f501954844e54b27c6614cff84 360 TIGRFAM TIGR01151 psbA: photosystem II q(b) protein 1 360 2.6E-240 T 11-10-2018 IPR005867 Photosystem II protein D1 GO:0009055 MetaCyc: PWY-101 syc1093_c b970b5f501954844e54b27c6614cff84 360 ProSitePatterns PS00244 Photosynthetic reaction center proteins signature. 191 217 - T 11-10-2018 IPR000484 Photosynthetic reaction centre, L/M GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 syc1093_c b970b5f501954844e54b27c6614cff84 360 Gene3D G3DSA:1.20.85.10 142 296 6.8E-25 T 11-10-2018 IPR036854 Photosystem II protein D1/D2 superfamily GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 syc1093_c b970b5f501954844e54b27c6614cff84 360 PRINTS PR00256 Bacterial photosynthetic reaction centre signature 197 223 2.2E-5 T 11-10-2018 IPR000484 Photosynthetic reaction centre, L/M GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 syc1093_c b970b5f501954844e54b27c6614cff84 360 PRINTS PR00256 Bacterial photosynthetic reaction centre signature 109 137 2.2E-5 T 11-10-2018 IPR000484 Photosynthetic reaction centre, L/M GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 syc1093_c b970b5f501954844e54b27c6614cff84 360 SUPERFAMILY SSF81483 12 343 9.55E-146 T 11-10-2018 IPR036854 Photosystem II protein D1/D2 superfamily GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 syc1216_c 0bec13c22bbf709312c5a3de05e21326 679 PIRSF PIRSF007398 603 679 0.061 T 11-10-2018 IPR011189 Uncharacterised conserved protein, caspase-like syc1216_c 0bec13c22bbf709312c5a3de05e21326 679 PIRSF PIRSF007398 10 188 5.6E-20 T 11-10-2018 IPR011189 Uncharacterised conserved protein, caspase-like syc1216_c 0bec13c22bbf709312c5a3de05e21326 679 PIRSF PIRSF007398 354 462 2.7E-6 T 11-10-2018 IPR011189 Uncharacterised conserved protein, caspase-like syc1216_c 0bec13c22bbf709312c5a3de05e21326 679 Gene3D G3DSA:3.40.50.1460 42 293 4.4E-21 T 11-10-2018 syc1216_c 0bec13c22bbf709312c5a3de05e21326 679 SUPERFAMILY SSF52129 23 136 6.28E-10 T 11-10-2018 IPR029030 Caspase-like domain superfamily syc1216_c 0bec13c22bbf709312c5a3de05e21326 679 Pfam PF00656 Caspase domain 44 129 2.0E-15 T 11-10-2018 syc2341_d e5f3cc2321ac2f381e73e9de973ecc68 128 Pfam PF06868 Protein of unknown function (DUF1257) 20 122 2.5E-43 T 11-10-2018 IPR009666 Uncharacterised protein family Ycf35 syc2413_d 0fb8c6528052a3e8344aae0514c21ba9 365 Gene3D G3DSA:3.50.50.60 7 353 2.2E-75 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc2413_d 0fb8c6528052a3e8344aae0514c21ba9 365 SUPERFAMILY SSF51905 5 359 1.94E-41 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc2413_d 0fb8c6528052a3e8344aae0514c21ba9 365 Gene3D G3DSA:3.30.9.10 92 311 2.2E-75 T 11-10-2018 syc2413_d 0fb8c6528052a3e8344aae0514c21ba9 365 Pfam PF01266 FAD dependent oxidoreductase 6 351 1.5E-58 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 syc2413_d 0fb8c6528052a3e8344aae0514c21ba9 365 SUPERFAMILY SSF54373 222 309 5.1E-15 T 11-10-2018 syc2203_c 65502611fd4c36c4fb761a173e91bb36 269 SUPERFAMILY SSF54975 20 78 5.67E-6 T 11-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 syc2203_c 65502611fd4c36c4fb761a173e91bb36 269 SUPERFAMILY SSF52821 91 224 6.17E-29 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily syc2203_c 65502611fd4c36c4fb761a173e91bb36 269 Hamap MF_00469 UPF0176 protein YceA [yceA]. 1 253 39.829 T 11-10-2018 IPR020936 Uncharacterised protein family UPF0176 syc2203_c 65502611fd4c36c4fb761a173e91bb36 269 SMART SM00450 112 213 9.2E-18 T 11-10-2018 IPR001763 Rhodanese-like domain syc2203_c 65502611fd4c36c4fb761a173e91bb36 269 Gene3D G3DSA:3.40.250.10 96 248 6.1E-46 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily syc2203_c 65502611fd4c36c4fb761a173e91bb36 269 Pfam PF00581 Rhodanese-like domain 115 209 3.6E-5 T 11-10-2018 IPR001763 Rhodanese-like domain syc2203_c 65502611fd4c36c4fb761a173e91bb36 269 Gene3D G3DSA:3.30.70.100 1 95 1.3E-30 T 11-10-2018 syc0378_d b930952e642f1a232997e2547990e02f 482 Pfam PF00795 Carbon-nitrogen hydrolase 283 431 1.5E-18 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 syc0378_d b930952e642f1a232997e2547990e02f 482 SUPERFAMILY SSF56317 203 457 5.36E-37 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily syc0378_d b930952e642f1a232997e2547990e02f 482 Gene3D G3DSA:3.60.110.10 226 454 2.8E-18 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily syc0378_d b930952e642f1a232997e2547990e02f 482 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 59 426 4.3E-60 T 11-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 syc0378_d b930952e642f1a232997e2547990e02f 482 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 2 464 15.41 T 11-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 syc1213_d 590a24a1fcf4dbaf20f97a4708fc9539 249 Gene3D G3DSA:2.40.10.350 155 230 1.8E-32 T 11-10-2018 syc1213_d 590a24a1fcf4dbaf20f97a4708fc9539 249 Pfam PF04085 rod shape-determining protein MreC 98 240 8.1E-34 T 11-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 syc1213_d 590a24a1fcf4dbaf20f97a4708fc9539 249 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 66 219 1.7E-30 T 11-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 syc1213_d 590a24a1fcf4dbaf20f97a4708fc9539 249 Gene3D G3DSA:2.40.10.340 96 237 1.8E-32 T 11-10-2018 syc2290_d 6dbae01c77cd42b9dd7aa08355e8e2b2 143 Gene3D G3DSA:3.30.1490.190 95 143 2.8E-8 T 11-10-2018 syc2290_d 6dbae01c77cd42b9dd7aa08355e8e2b2 143 Gene3D G3DSA:1.10.10.10 19 91 1.5E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily syc2290_d 6dbae01c77cd42b9dd7aa08355e8e2b2 143 Pfam PF01475 Ferric uptake regulator family 23 139 8.9E-22 T 11-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 syc2290_d 6dbae01c77cd42b9dd7aa08355e8e2b2 143 SUPERFAMILY SSF46785 14 141 2.15E-31 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily syc2382_d 5fa5753c2e30e506d0d895febaae0c89 513 Pfam PF01926 50S ribosome-binding GTPase 128 242 2.4E-15 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 syc2382_d 5fa5753c2e30e506d0d895febaae0c89 513 Pfam PF05128 Domain of unknown function (DUF697) 320 478 4.7E-55 T 11-10-2018 IPR021147 Protein of unknown function DUF697 syc2382_d 5fa5753c2e30e506d0d895febaae0c89 513 SUPERFAMILY SSF52540 97 261 2.7E-25 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc2382_d 5fa5753c2e30e506d0d895febaae0c89 513 Gene3D G3DSA:3.40.50.300 81 320 2.3E-30 T 11-10-2018 syc0483_c 3f0ecad2245ae5ff230c68b713bfb940 1039 Gene3D G3DSA:3.40.50.300 283 496 1.1E-21 T 11-10-2018 syc0483_c 3f0ecad2245ae5ff230c68b713bfb940 1039 Pfam PF04851 Type III restriction enzyme, res subunit 283 486 3.5E-12 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 syc0483_c 3f0ecad2245ae5ff230c68b713bfb940 1039 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 54 212 4.6E-15 T 11-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 syc0483_c 3f0ecad2245ae5ff230c68b713bfb940 1039 Gene3D G3DSA:3.90.1570.50 103 183 2.1E-7 T 11-10-2018 syc0483_c 3f0ecad2245ae5ff230c68b713bfb940 1039 SUPERFAMILY SSF52540 304 749 7.21E-5 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0483_c 3f0ecad2245ae5ff230c68b713bfb940 1039 SUPERFAMILY SSF52540 270 532 4.37E-18 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0483_c 3f0ecad2245ae5ff230c68b713bfb940 1039 SMART SM00487 279 513 1.6E-8 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain syc0483_c 3f0ecad2245ae5ff230c68b713bfb940 1039 Gene3D G3DSA:3.40.50.300 515 741 9.9E-21 T 11-10-2018 syc0896_c 41dbfc8092bf68079dad45ab6c041eaf 286 SUPERFAMILY SSF53335 13 280 3.96E-79 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase syc0896_c 41dbfc8092bf68079dad45ab6c041eaf 286 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 7 282 36.265 T 11-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 syc0896_c 41dbfc8092bf68079dad45ab6c041eaf 286 Gene3D G3DSA:3.40.50.150 58 283 4.1E-71 T 11-10-2018 syc0896_c 41dbfc8092bf68079dad45ab6c041eaf 286 Gene3D G3DSA:2.30.140.10 2 57 1.0E-9 T 11-10-2018 IPR037163 Spermidine synthase, tetramerisation domain superfamily KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 syc0896_c 41dbfc8092bf68079dad45ab6c041eaf 286 Pfam PF17284 Spermidine synthase tetramerisation domain 24 58 4.8E-6 T 11-10-2018 IPR035246 Spermidine synthase, tetramerisation domain KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 syc0896_c 41dbfc8092bf68079dad45ab6c041eaf 286 Pfam PF01564 Spermine/spermidine synthase domain 62 240 9.0E-49 T 11-10-2018 syc0896_c 41dbfc8092bf68079dad45ab6c041eaf 286 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 82 95 - T 11-10-2018 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 syc1995_c 0fd4806becbf69651255556e6bd9be2b 183 SUPERFAMILY SSF51182 1 180 1.07E-78 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily syc1995_c 0fd4806becbf69651255556e6bd9be2b 183 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 6 176 4.0E-75 T 11-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 syc1995_c 0fd4806becbf69651255556e6bd9be2b 183 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 3 179 4.2E-81 T 11-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 syc1995_c 0fd4806becbf69651255556e6bd9be2b 183 Gene3D G3DSA:2.60.120.10 1 182 4.1E-75 T 11-10-2018 IPR014710 RmlC-like jelly roll fold syc1995_c 0fd4806becbf69651255556e6bd9be2b 183 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 182 2.0E-104 T 11-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 syc0865_c ece4c7ae6c630239dd3dd98d7b021393 632 SUPERFAMILY SSF55073 413 603 6.59E-58 T 11-10-2018 IPR029787 Nucleotide cyclase syc0865_c ece4c7ae6c630239dd3dd98d7b021393 632 Pfam PF05226 CHASE2 domain 25 316 1.7E-37 T 11-10-2018 IPR007890 CHASE2 syc0865_c ece4c7ae6c630239dd3dd98d7b021393 632 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 419 606 1.2E-33 T 11-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 syc0865_c ece4c7ae6c630239dd3dd98d7b021393 632 SMART SM01080 33 320 1.3E-58 T 11-10-2018 IPR007890 CHASE2 syc0865_c ece4c7ae6c630239dd3dd98d7b021393 632 Gene3D G3DSA:3.30.70.1230 408 612 1.5E-62 T 11-10-2018 IPR029787 Nucleotide cyclase syc0865_c ece4c7ae6c630239dd3dd98d7b021393 632 SMART SM00044 383 588 3.4E-26 T 11-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 syc1665_d 64c1a9dcd7e28466b85717f1a137c37c 264 Gene3D G3DSA:3.40.50.300 7 260 1.9E-56 T 11-10-2018 syc1665_d 64c1a9dcd7e28466b85717f1a137c37c 264 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 syc1665_d 64c1a9dcd7e28466b85717f1a137c37c 264 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 11 264 2.5E-116 T 11-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 syc1665_d 64c1a9dcd7e28466b85717f1a137c37c 264 Pfam PF00005 ABC transporter 27 179 1.1E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 syc1665_d 64c1a9dcd7e28466b85717f1a137c37c 264 SUPERFAMILY SSF52540 8 224 3.19E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc1665_d 64c1a9dcd7e28466b85717f1a137c37c 264 SMART SM00382 35 244 4.1E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain syc2424_c 95b7c37d5a6f4e17b9d7be6ee409b3a7 371 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 142 210 7.5E-11 T 11-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 syc2424_c 95b7c37d5a6f4e17b9d7be6ee409b3a7 371 Gene3D G3DSA:3.30.360.10 129 364 3.9E-45 T 11-10-2018 syc2424_c 95b7c37d5a6f4e17b9d7be6ee409b3a7 371 SUPERFAMILY SSF51735 5 160 4.49E-50 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily syc2424_c 95b7c37d5a6f4e17b9d7be6ee409b3a7 371 SUPERFAMILY SSF55347 135 300 3.14E-32 T 11-10-2018 syc2424_c 95b7c37d5a6f4e17b9d7be6ee409b3a7 371 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 10 127 3.9E-30 T 11-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 syc2424_c 95b7c37d5a6f4e17b9d7be6ee409b3a7 371 Gene3D G3DSA:3.40.50.720 1 126 2.0E-35 T 11-10-2018 syc1235_c 2025ceccb1dd207f5ca3c76165a83f82 165 SUPERFAMILY SSF52833 16 162 3.13E-46 T 11-10-2018 IPR036249 Thioredoxin-like superfamily syc1235_c 2025ceccb1dd207f5ca3c76165a83f82 165 PIRSF PIRSF000216 1 165 1.6E-48 T 11-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc1235_c 2025ceccb1dd207f5ca3c76165a83f82 165 Gene3D G3DSA:1.10.10.1590 10 77 3.8E-15 T 11-10-2018 syc1235_c 2025ceccb1dd207f5ca3c76165a83f82 165 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 20 159 9.3E-44 T 11-10-2018 syc1235_c 2025ceccb1dd207f5ca3c76165a83f82 165 Gene3D G3DSA:3.40.30.10 78 159 8.6E-23 T 11-10-2018 syc2436_d fbc132500bd838d97dde87ac51eca700 1079 Pfam PF00723 Glycosyl hydrolases family 15 11 824 1.1E-130 T 11-10-2018 IPR011613 GH15-like domain Reactome: R-HSA-70221 syc2436_d fbc132500bd838d97dde87ac51eca700 1079 SUPERFAMILY SSF48208 13 440 7.48E-81 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 syc2436_d fbc132500bd838d97dde87ac51eca700 1079 Gene3D G3DSA:1.50.10.10 15 419 1.2E-18 T 11-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 syc0020_c a5a0a8bea4b5b343c65b983845ede946 225 Pfam PF03747 ADP-ribosylglycohydrolase 2 202 2.6E-40 T 11-10-2018 IPR005502 ADP-ribosylation/Crystallin J1 syc0020_c a5a0a8bea4b5b343c65b983845ede946 225 SUPERFAMILY SSF101478 2 223 1.96E-49 T 11-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily syc0020_c a5a0a8bea4b5b343c65b983845ede946 225 Gene3D G3DSA:1.10.4080.10 1 225 2.2E-63 T 11-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily syc0572_d 5c68a7bd5d9719d3451fad9ec28f6a7c 418 Pfam PF16258 Domain of unknown function (DUF4912) 97 211 2.0E-44 T 11-10-2018 IPR032585 Protein of unknown function DUF4912 syc0572_d 5c68a7bd5d9719d3451fad9ec28f6a7c 418 Pfam PF07498 Rho termination factor, N-terminal domain 10 49 7.8E-14 T 11-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 syc0572_d 5c68a7bd5d9719d3451fad9ec28f6a7c 418 Gene3D G3DSA:1.10.720.10 8 49 2.2E-9 T 11-10-2018 syc0572_d 5c68a7bd5d9719d3451fad9ec28f6a7c 418 SMART SM00959 9 51 2.5E-13 T 11-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 syc0572_d 5c68a7bd5d9719d3451fad9ec28f6a7c 418 SUPERFAMILY SSF68912 9 48 5.89E-7 T 11-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily syc1053_d feb9cadee68d61808dc350b3a5cff94c 241 Pfam PF13301 Protein of unknown function (DUF4079) 7 216 2.5E-41 T 11-10-2018 IPR025067 Protein of unknown function DUF4079 syc2210_d e4be4e0820968f9f84b766e50a011f24 255 Gene3D G3DSA:3.40.50.1000 6 220 5.7E-68 T 11-10-2018 IPR023214 HAD superfamily syc2210_d e4be4e0820968f9f84b766e50a011f24 255 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 199 2.7E-19 T 11-10-2018 syc2210_d e4be4e0820968f9f84b766e50a011f24 255 SUPERFAMILY SSF56784 1 222 2.31E-36 T 11-10-2018 IPR036412 HAD-like superfamily syc2210_d e4be4e0820968f9f84b766e50a011f24 255 Gene3D G3DSA:1.10.150.240 18 99 5.7E-68 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 syc2210_d e4be4e0820968f9f84b766e50a011f24 255 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 88 199 8.7E-11 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 syc0945_c 76048d5693fd1a3fb943ede052b6ef97 402 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 294 9.6E-24 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 syc0945_c 76048d5693fd1a3fb943ede052b6ef97 402 Gene3D G3DSA:3.90.25.10 218 375 3.7E-147 T 11-10-2018 syc0945_c 76048d5693fd1a3fb943ede052b6ef97 402 SUPERFAMILY SSF51735 2 362 1.51E-56 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily syc0945_c 76048d5693fd1a3fb943ede052b6ef97 402 Gene3D G3DSA:3.40.50.720 2 303 3.7E-147 T 11-10-2018 syc0696_d c791138082977f48bfbd07807588fdef 181 SUPERFAMILY SSF89550 2 178 4.32E-27 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 syc0696_d c791138082977f48bfbd07807588fdef 181 Gene3D G3DSA:3.20.20.140 1 180 3.3E-30 T 11-10-2018 syc1455_c 966e1b3ac0c7098732a47602832b5a81 645 SUPERFAMILY SSF51905 13 260 6.95E-21 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc1455_c 966e1b3ac0c7098732a47602832b5a81 645 Gene3D G3DSA:3.50.50.60 7 167 3.8E-7 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc1455_c 966e1b3ac0c7098732a47602832b5a81 645 Pfam PF12831 FAD dependent oxidoreductase 21 158 1.3E-17 T 11-10-2018 IPR039649 Digeranylgeranylglycerophospholipid reductase, N-terminal syc1455_c 966e1b3ac0c7098732a47602832b5a81 645 Pfam PF12831 FAD dependent oxidoreductase 208 435 1.8E-7 T 11-10-2018 IPR039649 Digeranylgeranylglycerophospholipid reductase, N-terminal syc1455_c 966e1b3ac0c7098732a47602832b5a81 645 Pfam PF12831 FAD dependent oxidoreductase 497 623 2.6E-23 T 11-10-2018 IPR039649 Digeranylgeranylglycerophospholipid reductase, N-terminal syc0005_d c6cfb3a86a141bd32813e6e1cc4d4e7d 465 Pfam PF00773 RNB domain 2 284 1.3E-30 T 11-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 syc0005_d c6cfb3a86a141bd32813e6e1cc4d4e7d 465 SMART SM00955 1 284 2.9E-25 T 11-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 syc0005_d c6cfb3a86a141bd32813e6e1cc4d4e7d 465 SUPERFAMILY SSF50249 3 312 2.17E-52 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold syc1205_d de9d3accabdad563b88d3948cc4ff8c6 379 Pfam PF10216 CO2 hydration protein (ChpXY) 18 367 5.0E-182 T 11-10-2018 IPR010220 CO2 hydration syc1205_d de9d3accabdad563b88d3948cc4ff8c6 379 TIGRFAM TIGR01964 chpXY: CO2 hydration protein 76 376 2.8E-137 T 11-10-2018 IPR010220 CO2 hydration syc1993_c f72531737f05c8ddd5b6e3aa0db74c1a 357 Gene3D G3DSA:3.90.25.10 201 328 2.5E-132 T 11-10-2018 syc1993_c f72531737f05c8ddd5b6e3aa0db74c1a 357 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 335 1.6E-147 T 11-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 syc1993_c f72531737f05c8ddd5b6e3aa0db74c1a 357 SUPERFAMILY SSF51735 1 332 3.77E-93 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily syc1993_c f72531737f05c8ddd5b6e3aa0db74c1a 357 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 322 2.9E-99 T 11-10-2018 IPR016040 NAD(P)-binding domain syc1993_c f72531737f05c8ddd5b6e3aa0db74c1a 357 Gene3D G3DSA:3.40.50.720 2 321 2.5E-132 T 11-10-2018 syc0701_d 513b9d5b2172a87868f99d3d20b1081d 334 Gene3D G3DSA:3.60.110.10 1 283 9.9E-112 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily syc0701_d 513b9d5b2172a87868f99d3d20b1081d 334 Pfam PF00795 Carbon-nitrogen hydrolase 7 277 3.2E-55 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 syc0701_d 513b9d5b2172a87868f99d3d20b1081d 334 ProSitePatterns PS00921 Nitrilases / cyanide hydratase active site signature. 157 170 - T 11-10-2018 IPR000132 Nitrilase/cyanide hydratase, conserved site GO:0016810 syc0701_d 513b9d5b2172a87868f99d3d20b1081d 334 TIGRFAM TIGR04048 nitrile_sll0784: putative nitrilase, sll0784 family 5 302 4.2E-164 T 11-10-2018 IPR023919 Nitrilase-related, sll0784 syc0701_d 513b9d5b2172a87868f99d3d20b1081d 334 SUPERFAMILY SSF56317 3 299 2.22E-73 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily syc0798_c e39e9f9287cb5b836ceb8c4229a16501 487 Pfam PF05136 Phage portal protein, lambda family 39 371 5.2E-115 T 11-10-2018 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 syc0798_c e39e9f9287cb5b836ceb8c4229a16501 487 TIGRFAM TIGR01539 portal_lambda: phage portal protein, lambda family 38 468 3.2E-95 T 11-10-2018 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 syc1080_c cd152ba5a00bd22b82b72ea3229cf56d 188 Pfam PF06054 Competence protein CoiA-like family 1 168 9.9E-15 T 11-10-2018 IPR010330 Competence-induced protein CoiA-like syc0424_c a9108176dcc78fd180d85eca90075899 311 Gene3D G3DSA:1.20.120.160 2 146 2.5E-35 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 syc0424_c a9108176dcc78fd180d85eca90075899 311 Pfam PF01627 Hpt domain 7 105 9.6E-17 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 syc0424_c a9108176dcc78fd180d85eca90075899 311 SMART SM00073 5 102 8.0E-21 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 syc0424_c a9108176dcc78fd180d85eca90075899 311 SUPERFAMILY SSF47226 6 125 2.62E-30 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 syc2430_d 0f933d202ace3059af1533ab2403c26f 165 Pfam PF09980 Predicted membrane protein (DUF2214) 17 162 1.4E-55 T 11-10-2018 IPR018706 Protein of unknown function DUF2214, membrane syc1351_c 70b2062b201746003ffdbb1a2a647b0e 205 Pfam PF04755 PAP_fibrillin 9 196 3.8E-45 T 11-10-2018 IPR006843 Plastid lipid-associated protein/fibrillin conserved domain syc1214_d 7653ef26453643f9aa6078758bd39176 227 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 22 217 3.6E-51 T 11-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 syc1214_d 7653ef26453643f9aa6078758bd39176 227 Pfam PF04093 rod shape-determining protein MreD 36 143 3.8E-8 T 11-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 syc0722_d ceaba64007b5cb227f35728bf47c643a 130 Gene3D G3DSA:1.10.10.10 1 75 3.8E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily syc0722_d ceaba64007b5cb227f35728bf47c643a 130 SUPERFAMILY SSF46785 4 122 6.26E-27 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily syc0722_d ceaba64007b5cb227f35728bf47c643a 130 Pfam PF01475 Ferric uptake regulator family 4 117 1.9E-21 T 11-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 syc0722_d ceaba64007b5cb227f35728bf47c643a 130 Gene3D G3DSA:3.30.1490.190 76 129 1.2E-14 T 11-10-2018 syc1078_d 8bae25889f6e6855e425bcd753febc74 405 PIRSF PIRSF038994 8 367 1.0E-109 T 11-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 syc1078_d 8bae25889f6e6855e425bcd753febc74 405 Gene3D G3DSA:3.20.20.140 62 363 3.0E-98 T 11-10-2018 syc1078_d 8bae25889f6e6855e425bcd753febc74 405 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 41 361 6.3E-79 T 11-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 syc1078_d 8bae25889f6e6855e425bcd753febc74 405 SUPERFAMILY SSF51556 62 361 7.18E-90 T 11-10-2018 IPR032466 Metal-dependent hydrolase syc2196_d ebe83ab3a2d316cea6cbc81de5c22165 174 Pfam PF06172 Cupin superfamily (DUF985) 22 154 7.9E-49 T 11-10-2018 IPR009327 Cupin domain of unknown function DUF985 syc2196_d ebe83ab3a2d316cea6cbc81de5c22165 174 SUPERFAMILY SSF51182 15 174 2.76E-61 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily syc2196_d ebe83ab3a2d316cea6cbc81de5c22165 174 Gene3D G3DSA:2.60.120.10 8 174 4.5E-61 T 11-10-2018 IPR014710 RmlC-like jelly roll fold syc0732_c 850381126e3243165240e82d4ac10c35 243 Pfam PF04452 RNA methyltransferase 21 235 4.8E-58 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 syc0732_c 850381126e3243165240e82d4ac10c35 243 Gene3D G3DSA:3.40.1280.10 4 241 6.3E-65 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal syc0732_c 850381126e3243165240e82d4ac10c35 243 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 8 235 9.0E-49 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 syc0732_c 850381126e3243165240e82d4ac10c35 243 SUPERFAMILY SSF88697 5 59 1.09E-12 T 11-10-2018 IPR015947 PUA-like superfamily syc0732_c 850381126e3243165240e82d4ac10c35 243 PIRSF PIRSF015601 4 239 3.7E-63 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 syc0732_c 850381126e3243165240e82d4ac10c35 243 SUPERFAMILY SSF75217 73 236 7.85E-45 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases syc0446_d f60e6b2fa7a6c71f188dc12a35d273e9 243 SUPERFAMILY SSF100950 1 241 5.98E-77 T 11-10-2018 IPR037171 NagB/RpiA transferase-like syc0446_d f60e6b2fa7a6c71f188dc12a35d273e9 243 Gene3D G3DSA:3.40.50.1360 1 243 1.3E-77 T 11-10-2018 syc0446_d f60e6b2fa7a6c71f188dc12a35d273e9 243 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 116 134 - T 11-10-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 syc0446_d f60e6b2fa7a6c71f188dc12a35d273e9 243 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 11 224 4.1E-23 T 11-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 syc1806_c a2a60c9d6b82e9b85a0bb1303cf64060 278 SUPERFAMILY SSF53448 5 223 1.21E-23 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases syc1806_c a2a60c9d6b82e9b85a0bb1303cf64060 278 Pfam PF01501 Glycosyl transferase family 8 70 111 6.2E-7 T 11-10-2018 IPR002495 Glycosyl transferase, family 8 GO:0016757 syc1806_c a2a60c9d6b82e9b85a0bb1303cf64060 278 Gene3D G3DSA:3.90.550.10 51 229 1.9E-14 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases syc0881_c 2f89e9c6bacbcb698d42cdf6fb0d8b92 411 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 1 411 100.332 T 11-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 syc0881_c 2f89e9c6bacbcb698d42cdf6fb0d8b92 411 Pfam PF00202 Aminotransferase class-III 19 378 2.7E-72 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 syc0881_c 2f89e9c6bacbcb698d42cdf6fb0d8b92 411 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 1 409 1.6E-177 T 11-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 syc0881_c 2f89e9c6bacbcb698d42cdf6fb0d8b92 411 SUPERFAMILY SSF53383 1 409 4.13E-130 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase syc0881_c 2f89e9c6bacbcb698d42cdf6fb0d8b92 411 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 220 256 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 syc0881_c 2f89e9c6bacbcb698d42cdf6fb0d8b92 411 Gene3D G3DSA:3.90.1150.10 1 403 6.8E-183 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 syc0881_c 2f89e9c6bacbcb698d42cdf6fb0d8b92 411 Gene3D G3DSA:3.40.640.10 55 303 6.8E-183 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 syc2336_d 570f938fc4594b56ab6541b941b52a1f 605 Pfam PF00474 Sodium:solute symporter family 46 465 4.7E-33 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 syc2336_d 570f938fc4594b56ab6541b941b52a1f 605 Gene3D G3DSA:1.20.1730.10 33 522 5.4E-94 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily syc0394_c dc04c0a578e7730d6cbac83eda557293 865 Gene3D G3DSA:3.90.320.10 598 856 1.6E-6 T 11-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal syc0394_c dc04c0a578e7730d6cbac83eda557293 865 Gene3D G3DSA:3.40.50.300 411 534 6.4E-7 T 11-10-2018 syc0394_c dc04c0a578e7730d6cbac83eda557293 865 SUPERFAMILY SSF52540 218 529 2.97E-27 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0394_c dc04c0a578e7730d6cbac83eda557293 865 SUPERFAMILY SSF52980 600 781 2.9E-6 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 syc0394_c dc04c0a578e7730d6cbac83eda557293 865 Pfam PF12705 PD-(D/E)XK nuclease superfamily 600 852 5.5E-35 T 11-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type syc1514_c 3959e6b37f90043b5c9ffc47e26fc14e 353 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 16 132 1.1E-29 T 11-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 syc1514_c 3959e6b37f90043b5c9ffc47e26fc14e 353 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 167 236 3.3E-4 T 11-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 syc1514_c 3959e6b37f90043b5c9ffc47e26fc14e 353 SUPERFAMILY SSF51735 14 150 6.6E-44 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily syc1514_c 3959e6b37f90043b5c9ffc47e26fc14e 353 SUPERFAMILY SSF55347 137 311 1.96E-14 T 11-10-2018 syc1514_c 3959e6b37f90043b5c9ffc47e26fc14e 353 Gene3D G3DSA:3.30.360.10 134 328 6.8E-38 T 11-10-2018 syc1514_c 3959e6b37f90043b5c9ffc47e26fc14e 353 Gene3D G3DSA:3.40.50.720 12 131 4.1E-36 T 11-10-2018 syc0941_d 6b3fce66d61db9e719bff1ac89c6ee25 334 Gene3D G3DSA:3.40.50.1820 36 328 2.8E-21 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold syc0941_d 6b3fce66d61db9e719bff1ac89c6ee25 334 SUPERFAMILY SSF53474 26 327 1.89E-28 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold syc0941_d 6b3fce66d61db9e719bff1ac89c6ee25 334 Pfam PF12697 Alpha/beta hydrolase family 88 313 1.4E-7 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 syc0941_d 6b3fce66d61db9e719bff1ac89c6ee25 334 PIRSF PIRSF005211 1 331 4.5E-54 T 11-10-2018 IPR012020 AB hydrolase 4 family syc0708_d e6f354db492a144f4244ecbb82228559 74 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 2 63 8.7E-17 T 11-10-2018 IPR025161 Putative transposase IS4/IS5 family syc0539_c ed7d5cbe97ae91983a841795008c64af 359 Gene3D G3DSA:1.25.40.10 27 137 4.4E-17 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc0539_c ed7d5cbe97ae91983a841795008c64af 359 Pfam PF13181 Tetratricopeptide repeat 243 274 0.063 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc0539_c ed7d5cbe97ae91983a841795008c64af 359 Gene3D G3DSA:1.25.40.10 138 275 5.0E-29 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc0539_c ed7d5cbe97ae91983a841795008c64af 359 Pfam PF13432 Tetratricopeptide repeat 285 338 1.1E-6 T 11-10-2018 syc0539_c ed7d5cbe97ae91983a841795008c64af 359 Pfam PF13432 Tetratricopeptide repeat 111 171 3.3E-6 T 11-10-2018 syc0539_c ed7d5cbe97ae91983a841795008c64af 359 Pfam PF13432 Tetratricopeptide repeat 180 242 9.3E-7 T 11-10-2018 syc0539_c ed7d5cbe97ae91983a841795008c64af 359 Pfam PF13432 Tetratricopeptide repeat 42 104 3.2E-4 T 11-10-2018 syc0539_c ed7d5cbe97ae91983a841795008c64af 359 SMART SM00028 38 71 86.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc0539_c ed7d5cbe97ae91983a841795008c64af 359 SMART SM00028 174 207 0.99 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc0539_c ed7d5cbe97ae91983a841795008c64af 359 SMART SM00028 242 275 10.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc0539_c ed7d5cbe97ae91983a841795008c64af 359 SMART SM00028 140 173 0.23 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc0539_c ed7d5cbe97ae91983a841795008c64af 359 SMART SM00028 208 241 0.0041 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc0539_c ed7d5cbe97ae91983a841795008c64af 359 SMART SM00028 310 343 18.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc0539_c ed7d5cbe97ae91983a841795008c64af 359 SMART SM00028 72 105 0.44 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc0539_c ed7d5cbe97ae91983a841795008c64af 359 SMART SM00028 276 309 240.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc0539_c ed7d5cbe97ae91983a841795008c64af 359 SMART SM00028 106 139 1.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 syc0539_c ed7d5cbe97ae91983a841795008c64af 359 SUPERFAMILY SSF48452 40 336 4.93E-39 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc0539_c ed7d5cbe97ae91983a841795008c64af 359 Gene3D G3DSA:1.25.40.10 276 359 3.3E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc0057_d f86aa260da254a5459808dbe2c9f1f28 280 SUPERFAMILY SSF54197 37 149 1.26E-21 T 11-10-2018 IPR036265 HIT-like superfamily syc0057_d f86aa260da254a5459808dbe2c9f1f28 280 Pfam PF09830 ATP adenylyltransferase 221 279 9.7E-20 T 11-10-2018 IPR019200 ATP adenylyltransferase, C-terminal GO:0003877 KEGG: 00230+2.7.7.53|KEGG: 00920+2.7.7.5|MetaCyc: PWY-5279 syc0057_d f86aa260da254a5459808dbe2c9f1f28 280 PIRSF PIRSF000846 1 280 8.8E-85 T 11-10-2018 IPR009163 ATP adenylyltransferase GO:0003877|GO:0005524|GO:0009117 KEGG: 00230+2.7.7.53|KEGG: 00920+2.7.7.5|MetaCyc: PWY-5279 syc0057_d f86aa260da254a5459808dbe2c9f1f28 280 Gene3D G3DSA:3.30.428.70 1 280 1.3E-69 T 11-10-2018 syc1769_d b5a9c9fce22ab7410fc8d6a65813c931 445 Gene3D G3DSA:1.10.101.10 53 112 2.0E-8 T 11-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 syc1769_d b5a9c9fce22ab7410fc8d6a65813c931 445 TIGRFAM TIGR00534 OpcA: glucose-6-phosphate dehydrogenase assembly protein OpcA 9 417 5.4E-136 T 11-10-2018 IPR004555 Glucose-6-phosphate dehydrogenase assembly protein OpcA syc1769_d b5a9c9fce22ab7410fc8d6a65813c931 445 Pfam PF01471 Putative peptidoglycan binding domain 55 106 1.3E-11 T 11-10-2018 IPR002477 Peptidoglycan binding-like syc1769_d b5a9c9fce22ab7410fc8d6a65813c931 445 SUPERFAMILY SSF47090 56 110 4.71E-13 T 11-10-2018 IPR036365 PGBD-like superfamily syc1769_d b5a9c9fce22ab7410fc8d6a65813c931 445 Pfam PF10128 Glucose-6-phosphate dehydrogenase subunit 131 432 9.0E-69 T 11-10-2018 IPR004555 Glucose-6-phosphate dehydrogenase assembly protein OpcA syc1776_c f62302921f3fe150ef1b4c563f387572 250 Pfam PF04402 Protein of unknown function (DUF541) 46 247 1.0E-24 T 11-10-2018 IPR007497 Protein of unknown function DUF541 syc1776_c f62302921f3fe150ef1b4c563f387572 250 Gene3D G3DSA:3.30.110.170 48 213 1.3E-20 T 11-10-2018 syc1776_c f62302921f3fe150ef1b4c563f387572 250 Gene3D G3DSA:3.30.70.2970 58 171 1.3E-20 T 11-10-2018 syc1776_c f62302921f3fe150ef1b4c563f387572 250 PIRSF PIRSF029033 7 250 2.9E-28 T 11-10-2018 IPR016907 Uncharacterised conserved protein UCP029033, periplasmic protein syc0169_d 8105e3463cd7d83f56190ef771f01cf8 377 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 19 191 2.1E-46 T 11-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 syc0169_d 8105e3463cd7d83f56190ef771f01cf8 377 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 198 377 1.8E-44 T 11-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 syc0169_d 8105e3463cd7d83f56190ef771f01cf8 377 SUPERFAMILY SSF52540 197 377 4.78E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0169_d 8105e3463cd7d83f56190ef771f01cf8 377 SUPERFAMILY SSF52540 19 187 1.01E-33 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0169_d 8105e3463cd7d83f56190ef771f01cf8 377 Gene3D G3DSA:3.40.50.300 2 194 5.6E-40 T 11-10-2018 syc0169_d 8105e3463cd7d83f56190ef771f01cf8 377 Gene3D G3DSA:3.40.50.300 195 377 1.4E-41 T 11-10-2018 syc0281_d dcdc4496a875a3e992a2263f7cda94c7 245 Pfam PF01501 Glycosyl transferase family 8 12 182 1.1E-7 T 11-10-2018 IPR002495 Glycosyl transferase, family 8 GO:0016757 syc0281_d dcdc4496a875a3e992a2263f7cda94c7 245 SUPERFAMILY SSF53448 10 217 7.31E-22 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases syc0281_d dcdc4496a875a3e992a2263f7cda94c7 245 Gene3D G3DSA:3.90.550.10 9 218 2.0E-9 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases syc1321_d 559303fb2e4ad91ea1416f19698a8d5b 374 PIRSF PIRSF026782 1 360 5.0E-91 T 11-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 syc1321_d 559303fb2e4ad91ea1416f19698a8d5b 374 TIGRFAM TIGR00312 cbiD: cobalamin biosynthesis protein CbiD 11 353 1.5E-89 T 11-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 syc1321_d 559303fb2e4ad91ea1416f19698a8d5b 374 SUPERFAMILY SSF111342 2 273 4.05E-67 T 11-10-2018 IPR036074 CbiD superfamily GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 syc1321_d 559303fb2e4ad91ea1416f19698a8d5b 374 Gene3D G3DSA:3.30.2110.10 4 171 3.6E-21 T 11-10-2018 IPR036074 CbiD superfamily GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 syc1321_d 559303fb2e4ad91ea1416f19698a8d5b 374 Hamap MF_00787 Cobalt-precorrin-5B C(1)-methyltransferase [cbiD]. 2 353 24.039 T 11-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 syc1321_d 559303fb2e4ad91ea1416f19698a8d5b 374 Pfam PF01888 CbiD 3 254 8.8E-65 T 11-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 syc2475_d 1253e3669cf74a9b42ba4aea799ad223 278 TIGRFAM TIGR01183 ntrB: nitrate ABC transporter, permease protein 68 270 5.7E-111 T 11-10-2018 IPR005889 Nitrate transport permease GO:0015112|GO:0015706|GO:0016021 syc2475_d 1253e3669cf74a9b42ba4aea799ad223 278 Gene3D G3DSA:1.10.3720.10 81 276 2.0E-22 T 11-10-2018 IPR035906 MetI-like superfamily syc2475_d 1253e3669cf74a9b42ba4aea799ad223 278 SUPERFAMILY SSF161098 80 266 5.89E-29 T 11-10-2018 IPR035906 MetI-like superfamily syc2475_d 1253e3669cf74a9b42ba4aea799ad223 278 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 104 276 3.4E-24 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 syc0097_d 8b3e232c66a912dd9a3db6fa9996136b 85 Pfam PF10718 Hypothetical chloroplast protein Ycf34 1 79 7.0E-40 T 11-10-2018 IPR019656 Uncharacterised protein family Ycf34 syc1298_c 7108393cd419a6ec81f653a607de47ca 323 Pfam PF03547 Membrane transport protein 191 316 1.1E-13 T 11-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 syc0296_d f155d6db41a19f8ae054838e5c1afb09 387 Gene3D G3DSA:3.40.640.10 31 294 6.1E-122 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 syc0296_d f155d6db41a19f8ae054838e5c1afb09 387 Gene3D G3DSA:3.90.1150.10 16 381 6.1E-122 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 syc0296_d f155d6db41a19f8ae054838e5c1afb09 387 SUPERFAMILY SSF53383 9 387 1.28E-81 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase syc0296_d f155d6db41a19f8ae054838e5c1afb09 387 Pfam PF00266 Aminotransferase class-V 32 373 1.7E-50 T 11-10-2018 IPR000192 Aminotransferase class V domain syc0296_d f155d6db41a19f8ae054838e5c1afb09 387 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 210 230 - T 11-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site syc0308_c 474796bf997b42f5a39805bcdeaf0cdf 309 Pfam PF03466 LysR substrate binding domain 87 295 1.3E-45 T 11-10-2018 IPR005119 LysR, substrate-binding syc0308_c 474796bf997b42f5a39805bcdeaf0cdf 309 Gene3D G3DSA:3.40.190.290 91 300 4.4E-39 T 11-10-2018 syc0308_c 474796bf997b42f5a39805bcdeaf0cdf 309 Gene3D G3DSA:1.10.10.10 1 84 5.4E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily syc0308_c 474796bf997b42f5a39805bcdeaf0cdf 309 SUPERFAMILY SSF53850 89 298 4.25E-42 T 11-10-2018 syc0308_c 474796bf997b42f5a39805bcdeaf0cdf 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 8.5E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 syc0308_c 474796bf997b42f5a39805bcdeaf0cdf 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 9.1E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 syc0308_c 474796bf997b42f5a39805bcdeaf0cdf 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 9.1E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 syc0308_c 474796bf997b42f5a39805bcdeaf0cdf 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 9.1E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 syc0308_c 474796bf997b42f5a39805bcdeaf0cdf 309 SUPERFAMILY SSF46785 1 110 4.55E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily syc0644_c 7fec6b95d04e8e514aae792ce6b50ccc 268 Gene3D G3DSA:3.40.50.300 1 249 6.2E-68 T 11-10-2018 syc0644_c 7fec6b95d04e8e514aae792ce6b50ccc 268 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 3 262 1.5E-119 T 11-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 syc0644_c 7fec6b95d04e8e514aae792ce6b50ccc 268 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 218 5.9E-24 T 11-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain syc0644_c 7fec6b95d04e8e514aae792ce6b50ccc 268 PIRSF PIRSF003092 1 267 2.8E-92 T 11-10-2018 IPR025501 ATP binding protein MinD syc0644_c 7fec6b95d04e8e514aae792ce6b50ccc 268 SUPERFAMILY SSF52540 1 244 7.1E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc1698_c a26915068a829fb9196a707adca14bc9 270 Pfam PF13911 AhpC/TSA antioxidant enzyme 57 243 2.6E-34 T 11-10-2018 IPR032801 Peroxiredoxin-like FAM213/AAED1 syc2054_d 2252aedfcfa1f0433de2bc951855b4f8 236 Gene3D G3DSA:2.40.50.580 6 86 5.5E-28 T 11-10-2018 syc2054_d 2252aedfcfa1f0433de2bc951855b4f8 236 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 5 233 6.9E-82 T 11-10-2018 IPR005224 Sugar fermentation stimulation protein syc2054_d 2252aedfcfa1f0433de2bc951855b4f8 236 Gene3D G3DSA:3.40.1350.60 87 236 1.9E-44 T 11-10-2018 syc2054_d 2252aedfcfa1f0433de2bc951855b4f8 236 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 5 236 52.55 T 11-10-2018 IPR005224 Sugar fermentation stimulation protein syc2054_d 2252aedfcfa1f0433de2bc951855b4f8 236 Pfam PF03749 Sugar fermentation stimulation protein 17 227 6.1E-72 T 11-10-2018 IPR005224 Sugar fermentation stimulation protein syc1656_d 93aa9f6d35727df44d0b9a1e30dcf70b 725 PRINTS PR00811 Bacterial general secretion pathway protein D signature 678 692 2.2E-11 T 11-10-2018 IPR001775 GspD/PilQ family syc1656_d 93aa9f6d35727df44d0b9a1e30dcf70b 725 PRINTS PR00811 Bacterial general secretion pathway protein D signature 655 673 2.2E-11 T 11-10-2018 IPR001775 GspD/PilQ family syc1656_d 93aa9f6d35727df44d0b9a1e30dcf70b 725 PRINTS PR00811 Bacterial general secretion pathway protein D signature 512 536 2.2E-11 T 11-10-2018 IPR001775 GspD/PilQ family syc1656_d 93aa9f6d35727df44d0b9a1e30dcf70b 725 Pfam PF03958 Bacterial type II/III secretion system short domain 301 427 8.0E-10 T 11-10-2018 IPR005644 NolW-like syc1656_d 93aa9f6d35727df44d0b9a1e30dcf70b 725 Gene3D G3DSA:3.55.50.30 204 291 3.6E-6 T 11-10-2018 syc1656_d 93aa9f6d35727df44d0b9a1e30dcf70b 725 Pfam PF00263 Bacterial type II and III secretion system protein 520 690 7.3E-34 T 11-10-2018 IPR004846 Type II/III secretion system GO:0009306 syc1656_d 93aa9f6d35727df44d0b9a1e30dcf70b 725 Pfam PF11741 AMIN domain 2 92 2.9E-10 T 11-10-2018 IPR021731 AMIN domain syc0825_c 6103c05a0b55715f77747cecd1eb3cc6 211 SUPERFAMILY SSF54001 12 176 2.33E-25 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily syc0825_c 6103c05a0b55715f77747cecd1eb3cc6 211 Pfam PF01841 Transglutaminase-like superfamily 27 133 1.5E-16 T 11-10-2018 IPR002931 Transglutaminase-like syc0825_c 6103c05a0b55715f77747cecd1eb3cc6 211 Gene3D G3DSA:3.10.620.30 1 156 4.5E-19 T 11-10-2018 syc1274_d b5bd44bdc37e5e5e2337b1b5dd209433 119 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 33 108 2.0E-16 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 syc1274_d b5bd44bdc37e5e5e2337b1b5dd209433 119 Hamap MF_00594 Cytochrome c6 [petJ]. 32 116 25.555 T 11-10-2018 IPR023655 Cytochrome c6 GO:0005506|GO:0009055 syc1274_d b5bd44bdc37e5e5e2337b1b5dd209433 119 SUPERFAMILY SSF46626 11 116 1.78E-24 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 syc1274_d b5bd44bdc37e5e5e2337b1b5dd209433 119 PRINTS PR00605 Class IC cytochrome C signature 43 54 1.9E-11 T 11-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 syc1274_d b5bd44bdc37e5e5e2337b1b5dd209433 119 PRINTS PR00605 Class IC cytochrome C signature 86 108 1.9E-11 T 11-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 syc1274_d b5bd44bdc37e5e5e2337b1b5dd209433 119 Gene3D G3DSA:1.10.760.10 33 118 1.2E-33 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 syc0189_d 7d91d49d788f3b47d41ce22c7cbeec5e 303 TIGRFAM TIGR02235 menA_cyano-plnt: 1,4-dihydroxy-2-naphthoate phytyltransferase 11 294 3.5E-114 T 11-10-2018 IPR011937 2-carboxy-1,4-naphthoquinone phytyltransferase GO:0004659|GO:0016021|GO:0042372 MetaCyc: PWY-5027 syc0189_d 7d91d49d788f3b47d41ce22c7cbeec5e 303 Hamap MF_01938 2-carboxy-1,4-naphthoquinone phytyltransferase [menA]. 12 295 33.334 T 11-10-2018 IPR011937 2-carboxy-1,4-naphthoquinone phytyltransferase GO:0004659|GO:0016021|GO:0042372 MetaCyc: PWY-5027 syc0189_d 7d91d49d788f3b47d41ce22c7cbeec5e 303 PIRSF PIRSF005355 1 298 1.1E-83 T 11-10-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 syc0189_d 7d91d49d788f3b47d41ce22c7cbeec5e 303 Pfam PF01040 UbiA prenyltransferase family 25 272 1.4E-29 T 11-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 syc2061_c 1a506559709223aa5b92b7752ca135b6 371 Gene3D G3DSA:3.40.50.2000 1 350 4.7E-96 T 11-10-2018 syc2061_c 1a506559709223aa5b92b7752ca135b6 371 Gene3D G3DSA:3.40.50.2000 180 348 4.7E-96 T 11-10-2018 syc2061_c 1a506559709223aa5b92b7752ca135b6 371 Pfam PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 187 337 1.9E-5 T 11-10-2018 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0016758 Reactome: R-HSA-156588 syc2061_c 1a506559709223aa5b92b7752ca135b6 371 SUPERFAMILY SSF53756 2 363 1.14E-78 T 11-10-2018 syc0999_c b23b5532a3aa8f1e90d40099838cf407 195 Pfam PF00805 Pentapeptide repeats (8 copies) 109 147 6.7E-9 T 11-10-2018 IPR001646 Pentapeptide repeat syc0999_c b23b5532a3aa8f1e90d40099838cf407 195 Pfam PF00805 Pentapeptide repeats (8 copies) 30 67 1.8E-10 T 11-10-2018 IPR001646 Pentapeptide repeat syc0999_c b23b5532a3aa8f1e90d40099838cf407 195 Pfam PF00805 Pentapeptide repeats (8 copies) 69 105 1.8E-8 T 11-10-2018 IPR001646 Pentapeptide repeat syc0999_c b23b5532a3aa8f1e90d40099838cf407 195 SUPERFAMILY SSF141571 30 165 6.28E-35 T 11-10-2018 syc0999_c b23b5532a3aa8f1e90d40099838cf407 195 Gene3D G3DSA:2.160.20.80 27 188 3.7E-37 T 11-10-2018 syc1884_d e6ba600fb4063ad9fcaef2a6f53da3af 186 PRINTS PR00094 Adenylate kinase signature 147 161 8.7E-32 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 syc1884_d e6ba600fb4063ad9fcaef2a6f53da3af 186 PRINTS PR00094 Adenylate kinase signature 82 98 8.7E-32 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 syc1884_d e6ba600fb4063ad9fcaef2a6f53da3af 186 PRINTS PR00094 Adenylate kinase signature 130 145 8.7E-32 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 syc1884_d e6ba600fb4063ad9fcaef2a6f53da3af 186 PRINTS PR00094 Adenylate kinase signature 33 47 8.7E-32 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 syc1884_d e6ba600fb4063ad9fcaef2a6f53da3af 186 PRINTS PR00094 Adenylate kinase signature 5 18 8.7E-32 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 syc1884_d e6ba600fb4063ad9fcaef2a6f53da3af 186 SUPERFAMILY SSF52540 4 183 2.33E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc1884_d e6ba600fb4063ad9fcaef2a6f53da3af 186 Gene3D G3DSA:3.40.50.300 1 185 7.8E-63 T 11-10-2018 syc1884_d e6ba600fb4063ad9fcaef2a6f53da3af 186 TIGRFAM TIGR01351 adk: adenylate kinase 3 128 1.8E-50 T 11-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 syc1884_d e6ba600fb4063ad9fcaef2a6f53da3af 186 Hamap MF_00235 Adenylate kinase [adk]. 2 183 42.323 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 syc1884_d e6ba600fb4063ad9fcaef2a6f53da3af 186 ProSitePatterns PS00113 Adenylate kinase signature. 82 93 - T 11-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 syc1884_d e6ba600fb4063ad9fcaef2a6f53da3af 186 Pfam PF00406 Adenylate kinase 7 159 3.9E-52 T 11-10-2018 syc0961_c 801115b7a339e1a2702cd978668db887 347 SUPERFAMILY SSF48452 67 303 1.49E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc0961_c 801115b7a339e1a2702cd978668db887 347 Gene3D G3DSA:1.25.40.10 232 324 1.0E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc0961_c 801115b7a339e1a2702cd978668db887 347 Gene3D G3DSA:1.25.40.10 66 231 3.8E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc2037_c 6ac689043d0a6f97664eaec77489cfe5 79 Pfam PF11165 Protein of unknown function (DUF2949) 22 76 1.0E-27 T 11-10-2018 IPR021336 Protein of unknown function DUF2949 syc0760_d 145e70d90aa5c340987fc7d46ee327c8 301 Pfam PF00348 Polyprenyl synthetase 37 271 1.5E-59 T 11-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 syc0760_d 145e70d90aa5c340987fc7d46ee327c8 301 Gene3D G3DSA:1.10.600.10 8 301 1.0E-110 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily syc0760_d 145e70d90aa5c340987fc7d46ee327c8 301 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 87 103 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site syc0760_d 145e70d90aa5c340987fc7d46ee327c8 301 SUPERFAMILY SSF48576 12 295 6.31E-90 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily syc0760_d 145e70d90aa5c340987fc7d46ee327c8 301 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 220 232 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site syc2170_d e654184a83430d0a7d243424587bdb19 183 Pfam PF10719 Late competence development protein ComFB 74 147 1.6E-12 T 11-10-2018 IPR019657 Late competence development protein ComFB syc0051_d 63cba27607af6a896b607070b4ed271c 341 Gene3D G3DSA:3.40.50.720 137 270 1.4E-12 T 11-10-2018 syc0051_d 63cba27607af6a896b607070b4ed271c 341 TIGRFAM TIGR04058 AcACP_reductase: long-chain fatty acyl-ACP reductase (aldehyde-forming) 1 338 1.4E-196 T 11-10-2018 IPR016836 Long-chain fatty acyl-ACP reductase, aldehyde-forming MetaCyc: PWY-6622|MetaCyc: PWY-7032 syc0051_d 63cba27607af6a896b607070b4ed271c 341 SUPERFAMILY SSF51735 128 322 1.86E-22 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily syc0051_d 63cba27607af6a896b607070b4ed271c 341 PIRSF PIRSF026396 1 341 2.6E-202 T 11-10-2018 IPR016836 Long-chain fatty acyl-ACP reductase, aldehyde-forming MetaCyc: PWY-6622|MetaCyc: PWY-7032 syc2369_d fbfeed6b604e93ad93f19d1a926ef81f 361 SUPERFAMILY SSF53850 54 358 1.49E-75 T 11-10-2018 syc2369_d fbfeed6b604e93ad93f19d1a926ef81f 361 Gene3D G3DSA:3.40.190.10 61 327 3.7E-124 T 11-10-2018 syc2369_d fbfeed6b604e93ad93f19d1a926ef81f 361 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 179 187 - T 11-10-2018 IPR034408 Sulphate/thiosulphate-binding site GO:1901681 syc2369_d fbfeed6b604e93ad93f19d1a926ef81f 361 Pfam PF13531 Bacterial extracellular solute-binding protein 60 312 9.1E-42 T 11-10-2018 syc2369_d fbfeed6b604e93ad93f19d1a926ef81f 361 Gene3D G3DSA:3.40.190.10 148 357 3.7E-124 T 11-10-2018 syc2369_d fbfeed6b604e93ad93f19d1a926ef81f 361 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 54 358 9.4E-89 T 11-10-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 syc0404_d 250ff4fe92c80b8892139f9a29681dc0 85 Pfam PF01722 BolA-like protein 26 77 1.3E-17 T 11-10-2018 IPR002634 BolA protein syc0404_d 250ff4fe92c80b8892139f9a29681dc0 85 SUPERFAMILY SSF82657 1 79 7.98E-25 T 11-10-2018 IPR036065 BolA-like superfamily syc0404_d 250ff4fe92c80b8892139f9a29681dc0 85 Gene3D G3DSA:3.30.300.90 2 75 6.2E-27 T 11-10-2018 syc0404_d 250ff4fe92c80b8892139f9a29681dc0 85 PIRSF PIRSF003113 1 84 4.3E-22 T 11-10-2018 IPR002634 BolA protein syc0242_d 53cadca4bb15a3d3f687dafedffd2aca 124 SUPERFAMILY SSF46689 6 111 1.51E-17 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 syc0242_d 53cadca4bb15a3d3f687dafedffd2aca 124 Pfam PF01710 Transposase 10 119 4.7E-9 T 11-10-2018 IPR002622 Transposase, Synechocystis PCC 6803 syc2035_d 0c0632060d344b1944409132f358514e 264 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 159 263 4.2E-41 T 11-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 syc2035_d 0c0632060d344b1944409132f358514e 264 PIRSF PIRSF000193 2 264 7.1E-79 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 syc2035_d 0c0632060d344b1944409132f358514e 264 SUPERFAMILY SSF48179 158 264 2.72E-37 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 syc2035_d 0c0632060d344b1944409132f358514e 264 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 3 263 28.282 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 syc2035_d 0c0632060d344b1944409132f358514e 264 Gene3D G3DSA:1.10.3730.10 162 264 7.0E-42 T 11-10-2018 syc2035_d 0c0632060d344b1944409132f358514e 264 Gene3D G3DSA:3.40.50.720 2 161 1.3E-46 T 11-10-2018 syc2035_d 0c0632060d344b1944409132f358514e 264 SUPERFAMILY SSF51735 5 157 1.29E-31 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily syc2035_d 0c0632060d344b1944409132f358514e 264 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 5 263 4.8E-88 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 syc2035_d 0c0632060d344b1944409132f358514e 264 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 5 97 6.0E-17 T 11-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal syc2035_d 0c0632060d344b1944409132f358514e 264 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 219 241 - T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 syc0493_c bc3ffbcc591b5af335058776bb25d9a5 207 Gene3D G3DSA:1.25.10.10 3 204 1.3E-17 T 11-10-2018 IPR011989 Armadillo-like helical syc0493_c bc3ffbcc591b5af335058776bb25d9a5 207 Pfam PF13646 HEAT repeats 69 162 6.5E-11 T 11-10-2018 syc0493_c bc3ffbcc591b5af335058776bb25d9a5 207 SUPERFAMILY SSF48371 44 164 4.76E-17 T 11-10-2018 IPR016024 Armadillo-type fold syc0493_c bc3ffbcc591b5af335058776bb25d9a5 207 SMART SM00567 E-Z type HEAT repeats 152 179 84.0 T 11-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 syc0493_c bc3ffbcc591b5af335058776bb25d9a5 207 SMART SM00567 E-Z type HEAT repeats 108 149 390.0 T 11-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 syc0493_c bc3ffbcc591b5af335058776bb25d9a5 207 SMART SM00567 E-Z type HEAT repeats 76 105 35.0 T 11-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 syc1006_d 37161b7ff079c2a63f1768b5115dae58 146 Gene3D G3DSA:2.60.450.10 72 138 8.7E-9 T 11-10-2018 syc1006_d 37161b7ff079c2a63f1768b5115dae58 146 Pfam PF03968 OstA-like protein 76 122 2.5E-6 T 11-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal syc0558_c 8111de09da0efd58f74530c039a487ee 383 Pfam PF00534 Glycosyl transferases group 1 196 349 1.5E-21 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 syc0558_c 8111de09da0efd58f74530c039a487ee 383 Gene3D G3DSA:3.40.50.2000 178 351 7.9E-57 T 11-10-2018 syc0558_c 8111de09da0efd58f74530c039a487ee 383 Pfam PF13439 Glycosyltransferase Family 4 16 182 3.1E-24 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 syc0558_c 8111de09da0efd58f74530c039a487ee 383 SUPERFAMILY SSF53756 1 372 5.61E-72 T 11-10-2018 syc0558_c 8111de09da0efd58f74530c039a487ee 383 Gene3D G3DSA:3.40.50.2000 14 368 7.9E-57 T 11-10-2018 syc1705_d aa73bc2c86c204e0e3f26e82261e5507 385 SUPERFAMILY SSF144010 181 384 7.72E-29 T 11-10-2018 syc1654_d 8c2dd92c281291d0ba6960ab63d9a7f9 113 Pfam PF05137 Fimbrial assembly protein (PilN) 2 59 2.3E-12 T 11-10-2018 IPR007813 Fimbrial assembly PilN syc1761_d ecaafac99313b29589a78e026497c0ba 115 ProDom PD005947 PHOTOSYSTEM SUBUNIT I XI REACTION CENTER MEMBRANE PSI PHOTOSYNTHESIS V 1 79 1.0E-38 T 11-10-2018 IPR003757 Photosystem I PsaL, reaction centre subunit XI GO:0009522|GO:0009538|GO:0015979 syc1761_d ecaafac99313b29589a78e026497c0ba 115 Gene3D G3DSA:1.20.1240.10 1 103 2.9E-35 T 11-10-2018 IPR036592 Photosystem I PsaL, reaction centre subunit XI superfamily GO:0009522|GO:0009538|GO:0015979 syc1761_d ecaafac99313b29589a78e026497c0ba 115 Pfam PF02605 Photosystem I reaction centre subunit XI 1 98 8.7E-37 T 11-10-2018 IPR003757 Photosystem I PsaL, reaction centre subunit XI GO:0009522|GO:0009538|GO:0015979 syc1761_d ecaafac99313b29589a78e026497c0ba 115 SUPERFAMILY SSF81568 1 107 2.35E-34 T 11-10-2018 IPR036592 Photosystem I PsaL, reaction centre subunit XI superfamily GO:0009522|GO:0009538|GO:0015979 syc0233_d aeb50900e390cd2ad2f913648ed4e246 318 Gene3D G3DSA:1.40.20.10 5 298 4.1E-47 T 11-10-2018 IPR038186 CHAD domain superfamily syc0233_d aeb50900e390cd2ad2f913648ed4e246 318 Pfam PF05235 CHAD domain 20 252 2.9E-45 T 11-10-2018 IPR007899 CHAD domain syc0233_d aeb50900e390cd2ad2f913648ed4e246 318 SMART SM00880 19 286 2.5E-55 T 11-10-2018 IPR007899 CHAD domain syc2137_d ffb6d342ee7278dc86ec6c5120863933 123 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 6 68 7.0E-14 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 syc1758_d e47bc433c525e9acf3619206351f7e42 112 Hamap MF_00619 Probable 30S ribosomal protein 3, chloroplastic [ycf65]. 14 111 31.181 T 11-10-2018 IPR006924 Ribosomal protein PSRP-3/Ycf65 GO:0003735|GO:0005840|GO:0006412 syc1758_d e47bc433c525e9acf3619206351f7e42 112 Gene3D G3DSA:1.20.58.750 16 111 2.9E-40 T 11-10-2018 IPR038447 PSRP-3/Ycf65 superfamily syc1758_d e47bc433c525e9acf3619206351f7e42 112 Pfam PF04839 Plastid and cyanobacterial ribosomal protein (PSRP-3 / Ycf65) 43 90 3.1E-29 T 11-10-2018 IPR006924 Ribosomal protein PSRP-3/Ycf65 GO:0003735|GO:0005840|GO:0006412 syc1758_d e47bc433c525e9acf3619206351f7e42 112 ProDom PD015453 RIBOSOMAL CHLOROPLAST 30S RIBONUCLEOPROTEIN PSRP-3 PROBABLE PLASTID PLASTID-SPECIFIC YCF65-LIKE PEPTIDE 16 88 1.0E-36 T 11-10-2018 IPR006924 Ribosomal protein PSRP-3/Ycf65 GO:0003735|GO:0005840|GO:0006412 syc0331_c 20add7817134da2fef8959910866e0a2 127 ProSitePatterns PS01169 Ribosomal protein L21 signature. 73 95 - T 11-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc0331_c 20add7817134da2fef8959910866e0a2 127 TIGRFAM TIGR00061 L21: ribosomal protein bL21 3 102 3.7E-34 T 11-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc0331_c 20add7817134da2fef8959910866e0a2 127 Pfam PF00829 Ribosomal prokaryotic L21 protein 3 102 9.7E-33 T 11-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc0331_c 20add7817134da2fef8959910866e0a2 127 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 2 104 24.176 T 11-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc0331_c 20add7817134da2fef8959910866e0a2 127 SUPERFAMILY SSF141091 3 103 1.44E-33 T 11-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc1882_d 7fbfec39aa5e50add47950d923f9bbe6 147 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 144 3.1E-48 T 11-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc1882_d 7fbfec39aa5e50add47950d923f9bbe6 147 SUPERFAMILY SSF52080 4 144 1.96E-43 T 11-10-2018 IPR036227 Ribosomal L18e/L15P superfamily syc1882_d 7fbfec39aa5e50add47950d923f9bbe6 147 ProSitePatterns PS00475 Ribosomal protein L15 signature. 111 141 - T 11-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc1882_d 7fbfec39aa5e50add47950d923f9bbe6 147 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 27 145 2.7E-30 T 11-10-2018 IPR021131 Ribosomal protein L18e/L15P syc1882_d 7fbfec39aa5e50add47950d923f9bbe6 147 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 147 19.4 T 11-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 syc1882_d 7fbfec39aa5e50add47950d923f9bbe6 147 Gene3D G3DSA:3.100.10.10 69 147 2.4E-20 T 11-10-2018 syc2078_c d886e6a8499c658c72a1e26c3ba18d69 97 Pfam PF02325 YGGT family 17 83 1.6E-16 T 11-10-2018 IPR003425 CCB3/YggT GO:0016020 syc2515_d 775b33f67db9cbdd52090657dfacb9c3 339 TIGRFAM TIGR03609 S_layer_CsaB: polysaccharide pyruvyl transferase CsaB 2 299 1.1E-119 T 11-10-2018 IPR019896 Polysaccharide pyruvyl transferase, CsaB syc2515_d 775b33f67db9cbdd52090657dfacb9c3 339 Pfam PF04230 Polysaccharide pyruvyl transferase 13 278 2.7E-40 T 11-10-2018 IPR007345 Polysaccharide pyruvyl transferase syc0919_d 8e0e6792be7446bb00b3cb1e16e077fa 327 Pfam PF01062 Bestrophin, RFP-TM, chloride channel 9 281 1.9E-50 T 11-10-2018 IPR021134 Bestrophin/UPF0187 Reactome: R-HSA-2672351 syc0525_c 484239ccb4e91e079e75b95f3013c646 447 Gene3D G3DSA:3.40.50.12780 19 338 2.1E-37 T 11-10-2018 syc0525_c 484239ccb4e91e079e75b95f3013c646 447 Pfam PF13193 AMP-binding enzyme C-terminal domain 354 428 7.3E-15 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain syc0525_c 484239ccb4e91e079e75b95f3013c646 447 Gene3D G3DSA:3.30.300.310 341 441 1.2E-24 T 11-10-2018 syc0525_c 484239ccb4e91e079e75b95f3013c646 447 Pfam PF00501 AMP-binding enzyme 116 343 6.3E-21 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 syc0525_c 484239ccb4e91e079e75b95f3013c646 447 SUPERFAMILY SSF56801 34 440 3.79E-68 T 11-10-2018 syc0044_c 552e9ea0fb40d1bdf865cadca89c7b28 110 Pfam PF06282 Protein of unknown function (DUF1036) 2 109 6.3E-38 T 11-10-2018 IPR009380 Protein of unknown function DUF1036 syc2417_d cc32fd4c89c8131c5df9990f5f8fb133 221 Pfam PF11152 Cofactor assembly of complex C subunit B, CCB2/CCB4 12 205 3.2E-79 T 11-10-2018 IPR021325 Cofactor assembly of complex C subunit B, CCB2/CCB4 syc2417_d cc32fd4c89c8131c5df9990f5f8fb133 221 Gene3D G3DSA:3.30.450.40 95 220 1.1E-5 T 11-10-2018 IPR029016 GAF-like domain superfamily syc2417_d cc32fd4c89c8131c5df9990f5f8fb133 221 SUPERFAMILY SSF55781 126 205 8.63E-7 T 11-10-2018 syc1333_d 07ec2feefbb586d9c04fa9d6d13ac0e6 262 Pfam PF06182 ABC-2 family transporter protein 55 261 1.3E-18 T 11-10-2018 IPR010390 Protein of unknown function DUF990 syc1663_d c45d0672bdeb627bea1df05efffdc454 299 SUPERFAMILY SSF161098 18 291 4.86E-33 T 11-10-2018 IPR035906 MetI-like superfamily syc1663_d c45d0672bdeb627bea1df05efffdc454 299 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 295 5.1E-20 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 syc1663_d c45d0672bdeb627bea1df05efffdc454 299 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 14 294 3.6E-78 T 11-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 syc1663_d c45d0672bdeb627bea1df05efffdc454 299 Gene3D G3DSA:1.10.3720.10 70 297 1.3E-33 T 11-10-2018 IPR035906 MetI-like superfamily syc0607_d 49250fb32f4408c85510447092a58d47 256 Pfam PF01925 Sulfite exporter TauE/SafE 6 248 4.0E-45 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 syc0628_d e8015495ec7fe03d17e3a62e3f9aab00 203 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 58 203 2.3E-53 T 11-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 syc0628_d e8015495ec7fe03d17e3a62e3f9aab00 203 Gene3D G3DSA:1.20.1260.10 8 203 3.2E-69 T 11-10-2018 IPR012347 Ferritin-like syc0628_d e8015495ec7fe03d17e3a62e3f9aab00 203 SUPERFAMILY SSF47240 11 203 1.85E-70 T 11-10-2018 IPR009078 Ferritin-like superfamily syc0628_d e8015495ec7fe03d17e3a62e3f9aab00 203 PIRSF PIRSF020736 1 203 5.5E-80 T 11-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 syc1260_d c048a6394464d0d1feac0de18d5a856f 162 SUPERFAMILY SSF49764 30 123 1.7E-6 T 11-10-2018 IPR008978 HSP20-like chaperone syc0155_d 845453132d6295aace17766f8d038429 373 PRINTS PR00134 Glycosyl hydrolase family 10 signature 110 122 9.4E-11 T 11-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 syc0155_d 845453132d6295aace17766f8d038429 373 PRINTS PR00134 Glycosyl hydrolase family 10 signature 152 163 9.4E-11 T 11-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 syc0155_d 845453132d6295aace17766f8d038429 373 PRINTS PR00134 Glycosyl hydrolase family 10 signature 197 208 9.4E-11 T 11-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 syc0155_d 845453132d6295aace17766f8d038429 373 PRINTS PR00134 Glycosyl hydrolase family 10 signature 230 242 9.4E-11 T 11-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 syc0155_d 845453132d6295aace17766f8d038429 373 Pfam PF00331 Glycosyl hydrolase family 10 36 355 8.7E-78 T 11-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 syc0155_d 845453132d6295aace17766f8d038429 373 SMART SM00633 79 359 6.2E-54 T 11-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 syc0155_d 845453132d6295aace17766f8d038429 373 SUPERFAMILY SSF51445 40 362 3.05E-87 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily syc0155_d 845453132d6295aace17766f8d038429 373 Gene3D G3DSA:3.20.20.80 34 365 2.5E-86 T 11-10-2018 syc0849_c 3bffc2d901b0767017b7c4c518ab35bf 271 Pfam PF04116 Fatty acid hydroxylase superfamily 105 240 2.0E-26 T 11-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 syc1598_c e99acb6bb4a6b5c9d08cf23674bf5b8b 398 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 5.5E-7 T 11-10-2018 syc1598_c e99acb6bb4a6b5c9d08cf23674bf5b8b 398 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 156 174 5.5E-7 T 11-10-2018 syc1598_c e99acb6bb4a6b5c9d08cf23674bf5b8b 398 SUPERFAMILY SSF51905 7 195 1.77E-26 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc1598_c e99acb6bb4a6b5c9d08cf23674bf5b8b 398 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 313 1.8E-38 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 syc1598_c e99acb6bb4a6b5c9d08cf23674bf5b8b 398 SUPERFAMILY SSF51905 151 325 3.01E-15 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc1598_c e99acb6bb4a6b5c9d08cf23674bf5b8b 398 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 285 292 4.2E-6 T 11-10-2018 syc1598_c e99acb6bb4a6b5c9d08cf23674bf5b8b 398 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 156 181 4.2E-6 T 11-10-2018 syc1598_c e99acb6bb4a6b5c9d08cf23674bf5b8b 398 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 4.2E-6 T 11-10-2018 syc1598_c e99acb6bb4a6b5c9d08cf23674bf5b8b 398 Gene3D G3DSA:3.50.50.100 4 383 2.4E-90 T 11-10-2018 syc0821_c 14bb6be7cb6a00d4ca93d4258b84ec2e 109 Gene3D G3DSA:3.10.180.10 2 79 5.5E-10 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase syc0821_c 14bb6be7cb6a00d4ca93d4258b84ec2e 109 SUPERFAMILY SSF54593 4 70 9.86E-8 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase syc0407_c c85df1773916525bbeee14dda0089b2f 198 Pfam PF01936 NYN domain 22 170 9.6E-37 T 11-10-2018 IPR021139 NYN domain, limkain-b1-type syc0407_c c85df1773916525bbeee14dda0089b2f 198 Gene3D G3DSA:3.40.50.1010 13 173 5.0E-54 T 11-10-2018 syc0823_d 1810b9b0d6d46157803db5a6fe166f22 489 Gene3D G3DSA:3.90.100.10 386 489 7.4E-17 T 11-10-2018 syc0823_d 1810b9b0d6d46157803db5a6fe166f22 489 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 405 462 2.6E-10 T 11-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 syc0823_d 1810b9b0d6d46157803db5a6fe166f22 489 SUPERFAMILY SSF55904 338 485 1.96E-34 T 11-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 syc0823_d 1810b9b0d6d46157803db5a6fe166f22 489 SUPERFAMILY SSF53383 4 381 1.08E-88 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase syc0823_d 1810b9b0d6d46157803db5a6fe166f22 489 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 4 298 2.2E-65 T 11-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 syc0823_d 1810b9b0d6d46157803db5a6fe166f22 489 Gene3D G3DSA:3.40.640.10 3 279 1.6E-100 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 syc0823_d 1810b9b0d6d46157803db5a6fe166f22 489 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 218 232 - T 11-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 syc0072_d e554f952f12526a5ed78a63e11aab596 122 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 3 118 15.895 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 syc0072_d e554f952f12526a5ed78a63e11aab596 122 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 5 117 2.0E-15 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 syc0072_d e554f952f12526a5ed78a63e11aab596 122 Gene3D G3DSA:3.30.230.10 1 117 4.7E-19 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup syc0072_d e554f952f12526a5ed78a63e11aab596 122 Pfam PF00825 Ribonuclease P 3 115 5.0E-23 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 syc0072_d e554f952f12526a5ed78a63e11aab596 122 SUPERFAMILY SSF54211 2 120 4.8E-20 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold syc0324_c 225c88d6cb6831668f909bc989500e88 445 SUPERFAMILY SSF63411 23 249 2.17E-49 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 syc0324_c 225c88d6cb6831668f909bc989500e88 445 Pfam PF00675 Insulinase (Peptidase family M16) 47 190 1.9E-10 T 11-10-2018 IPR011765 Peptidase M16, N-terminal syc0324_c 225c88d6cb6831668f909bc989500e88 445 Pfam PF05193 Peptidase M16 inactive domain 196 367 3.1E-30 T 11-10-2018 IPR007863 Peptidase M16, C-terminal syc0324_c 225c88d6cb6831668f909bc989500e88 445 Gene3D G3DSA:3.30.830.10 255 441 1.2E-39 T 11-10-2018 syc0324_c 225c88d6cb6831668f909bc989500e88 445 Gene3D G3DSA:3.30.830.10 35 243 2.1E-49 T 11-10-2018 syc0324_c 225c88d6cb6831668f909bc989500e88 445 SUPERFAMILY SSF63411 262 443 1.07E-37 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 syc1943_c 07adafe2588c5c7cd0efc7dfe5e8013c 286 Pfam PF01061 ABC-2 type transporter 28 237 1.9E-31 T 11-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 syc1943_c 07adafe2588c5c7cd0efc7dfe5e8013c 286 PRINTS PR00164 ABC-2 type transport system membrane protein signature 159 183 5.8E-6 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 syc1943_c 07adafe2588c5c7cd0efc7dfe5e8013c 286 PRINTS PR00164 ABC-2 type transport system membrane protein signature 196 215 5.8E-6 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 syc1943_c 07adafe2588c5c7cd0efc7dfe5e8013c 286 PRINTS PR00164 ABC-2 type transport system membrane protein signature 216 235 5.8E-6 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 syc1943_c 07adafe2588c5c7cd0efc7dfe5e8013c 286 PRINTS PR00164 ABC-2 type transport system membrane protein signature 76 98 5.8E-6 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 syc1943_c 07adafe2588c5c7cd0efc7dfe5e8013c 286 PIRSF PIRSF006648 2 286 3.3E-66 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 syc1495_c 16dc2df467ca73594b98d85a7d1aa8d3 290 SUPERFAMILY SSF50346 90 157 6.8E-7 T 11-10-2018 IPR011033 PRC-barrel-like superfamily syc0382_d a1e27077eaeb4e606794a6b09f8cf7f3 260 Pfam PF00731 AIR carboxylase 124 250 8.9E-18 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 syc0382_d a1e27077eaeb4e606794a6b09f8cf7f3 260 SUPERFAMILY SSF52255 122 251 3.14E-29 T 11-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 syc0382_d a1e27077eaeb4e606794a6b09f8cf7f3 260 Gene3D G3DSA:3.40.50.7700 123 256 5.2E-35 T 11-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 syc0382_d a1e27077eaeb4e606794a6b09f8cf7f3 260 SMART SM01001 121 253 4.4E-34 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 syc2286_c b6c364d3bcfa7b3e3d2db9e53fd34f85 148 SUPERFAMILY SSF55811 14 142 1.49E-31 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 syc2286_c b6c364d3bcfa7b3e3d2db9e53fd34f85 148 Pfam PF00293 NUDIX domain 19 135 1.7E-22 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 syc2286_c b6c364d3bcfa7b3e3d2db9e53fd34f85 148 PRINTS PR00502 NUDIX hydrolase family signature 42 56 3.2E-9 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 syc2286_c b6c364d3bcfa7b3e3d2db9e53fd34f85 148 PRINTS PR00502 NUDIX hydrolase family signature 56 71 3.2E-9 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 syc2286_c b6c364d3bcfa7b3e3d2db9e53fd34f85 148 Gene3D G3DSA:3.90.79.10 11 143 7.2E-31 T 11-10-2018 syc2286_c b6c364d3bcfa7b3e3d2db9e53fd34f85 148 ProSitePatterns PS00893 Nudix box signature. 47 68 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 syc2050_d a1bcf58b0c825d2a0752de04e804531f 139 Pfam PF02675 S-adenosylmethionine decarboxylase 20 125 8.1E-39 T 11-10-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 syc2050_d a1bcf58b0c825d2a0752de04e804531f 139 Hamap MF_00464 S-adenosylmethionine decarboxylase proenzyme [speH]. 14 130 29.069 T 11-10-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 syc2050_d a1bcf58b0c825d2a0752de04e804531f 139 SUPERFAMILY SSF56276 17 125 3.45E-42 T 11-10-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 syc2050_d a1bcf58b0c825d2a0752de04e804531f 139 Gene3D G3DSA:3.30.160.750 76 137 1.0E-20 T 11-10-2018 syc2050_d a1bcf58b0c825d2a0752de04e804531f 139 Gene3D G3DSA:3.30.360.110 16 75 1.4E-19 T 11-10-2018 syc2050_d a1bcf58b0c825d2a0752de04e804531f 139 TIGRFAM TIGR03330 SAM_DCase_Bsu: S-adenosylmethionine decarboxylase proenzyme 17 125 1.0E-41 T 11-10-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 syc1431_d 800b46cfb84e0da2eaa31bab46c52f72 398 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 56 392 2.3E-95 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 syc1431_d 800b46cfb84e0da2eaa31bab46c52f72 398 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 55 396 29.545 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 syc1431_d 800b46cfb84e0da2eaa31bab46c52f72 398 Gene3D G3DSA:3.40.50.11270 66 157 2.3E-60 T 11-10-2018 syc1431_d 800b46cfb84e0da2eaa31bab46c52f72 398 Gene3D G3DSA:3.40.1010.20 158 287 2.3E-60 T 11-10-2018 syc1431_d 800b46cfb84e0da2eaa31bab46c52f72 398 Pfam PF02401 LytB protein 57 392 1.6E-82 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 syc1431_d 800b46cfb84e0da2eaa31bab46c52f72 398 Gene3D G3DSA:3.40.1010.20 57 392 2.3E-60 T 11-10-2018 syc2307_d d9a9bc1ddc99fa089b8b451179e8986d 175 Pfam PF10726 Protein of function (DUF2518) 5 147 5.9E-60 T 11-10-2018 IPR019664 Uncharacterised protein family Ycf51 syc0960_c 1b0f7d5581fece5806c15eb34b6c0bb9 151 Pfam PF12049 Protein of unknown function (DUF3531) 1 138 4.9E-67 T 11-10-2018 IPR021920 Protein of unknown function DUF3531 syc1873_d d26ef748bf42154fb8228f2ed0f11a32 64 SUPERFAMILY SSF46561 4 64 7.19E-20 T 11-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc1873_d d26ef748bf42154fb8228f2ed0f11a32 64 TIGRFAM TIGR00012 L29: ribosomal protein uL29 8 63 3.9E-23 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc1873_d d26ef748bf42154fb8228f2ed0f11a32 64 Gene3D G3DSA:1.10.287.310 5 64 9.6E-22 T 11-10-2018 syc1873_d d26ef748bf42154fb8228f2ed0f11a32 64 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 3 63 16.76 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc1873_d d26ef748bf42154fb8228f2ed0f11a32 64 ProSitePatterns PS00579 Ribosomal protein L29 signature. 42 56 - T 11-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc1873_d d26ef748bf42154fb8228f2ed0f11a32 64 Pfam PF00831 Ribosomal L29 protein 8 63 2.3E-22 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 syc0052_d 3701636e001c7fdd356921ce3d073481 327 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 119 137 1.1E-49 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 syc0052_d 3701636e001c7fdd356921ce3d073481 327 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 94 105 1.1E-49 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 syc0052_d 3701636e001c7fdd356921ce3d073481 327 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 140 156 1.1E-49 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 syc0052_d 3701636e001c7fdd356921ce3d073481 327 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 159 172 1.1E-49 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 syc0052_d 3701636e001c7fdd356921ce3d073481 327 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 203 212 1.1E-49 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 syc0052_d 3701636e001c7fdd356921ce3d073481 327 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 175 188 1.1E-49 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 syc0052_d 3701636e001c7fdd356921ce3d073481 327 SUPERFAMILY SSF52096 12 322 7.97E-96 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily syc0052_d 3701636e001c7fdd356921ce3d073481 327 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 12 154 3.1E-58 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 syc0052_d 3701636e001c7fdd356921ce3d073481 327 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 11 325 6.3E-151 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 syc0052_d 3701636e001c7fdd356921ce3d073481 327 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 11 322 49.91 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 syc0052_d 3701636e001c7fdd356921ce3d073481 327 Gene3D G3DSA:3.90.226.10 3 324 1.2E-114 T 11-10-2018 syc2362_c e26ad2cc06452fb57c41f203e71c3ec5 385 SUPERFAMILY SSF52540 34 117 3.06E-5 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc2362_c e26ad2cc06452fb57c41f203e71c3ec5 385 Gene3D G3DSA:3.40.50.620 240 364 7.2E-7 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold syc2362_c e26ad2cc06452fb57c41f203e71c3ec5 385 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 23 232 1.9E-94 T 11-10-2018 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 syc2362_c e26ad2cc06452fb57c41f203e71c3ec5 385 SUPERFAMILY SSF52402 248 361 2.26E-8 T 11-10-2018 syc2362_c e26ad2cc06452fb57c41f203e71c3ec5 385 Gene3D G3DSA:3.40.50.300 21 231 2.0E-93 T 11-10-2018 syc0234_c 82a9928b7f32787a23b49a992c0c36ee 179 Gene3D G3DSA:3.40.50.2020 2 178 3.4E-57 T 11-10-2018 syc0234_c 82a9928b7f32787a23b49a992c0c36ee 179 Hamap MF_01219 Bifunctional protein PyrR [pyrR]. 5 177 33.666 T 11-10-2018 IPR023050 Bifunctional protein PyrR KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 syc0234_c 82a9928b7f32787a23b49a992c0c36ee 179 SUPERFAMILY SSF53271 8 170 6.29E-42 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like syc0234_c 82a9928b7f32787a23b49a992c0c36ee 179 Pfam PF00156 Phosphoribosyl transferase domain 16 144 1.8E-18 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 syc2478_d 37fe4a7d1cc907657ca37bab3b5b01f1 189 Pfam PF09988 Uncharacterized metal-binding protein (DUF2227) 2 170 3.2E-60 T 11-10-2018 IPR019250 Protein of unknown function DUF2227, metal-binding syc0649_c 278a3cf1f0a4411947c4f82eae18efd2 99 Pfam PF08865 Domain of unknown function (DUF1830) 18 83 9.2E-33 T 11-10-2018 IPR014964 Protein of unknown function DUF1830 syc1388_c 2e3c840c6409f39bcdb95de095eee2a0 324 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 38 62 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 syc1388_c 2e3c840c6409f39bcdb95de095eee2a0 324 Pfam PF00294 pfkB family carbohydrate kinase 7 313 1.9E-49 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB syc1388_c 2e3c840c6409f39bcdb95de095eee2a0 324 SUPERFAMILY SSF53613 6 320 7.33E-67 T 11-10-2018 IPR029056 Ribokinase-like syc1388_c 2e3c840c6409f39bcdb95de095eee2a0 324 Gene3D G3DSA:3.40.1190.20 3 324 3.2E-84 T 11-10-2018 IPR029056 Ribokinase-like syc2379_c 7e352bc023a33e5722819a38c1d9d8ab 121 SUPERFAMILY SSF54447 1 119 4.71E-44 T 11-10-2018 IPR009044 ssDNA-binding transcriptional regulator GO:0003677|GO:0006355 syc2379_c 7e352bc023a33e5722819a38c1d9d8ab 121 Gene3D G3DSA:2.30.31.10 1 121 7.6E-46 T 11-10-2018 IPR009044 ssDNA-binding transcriptional regulator GO:0003677|GO:0006355 syc2379_c 7e352bc023a33e5722819a38c1d9d8ab 121 Pfam PF08848 Domain of unknown function (DUF1818) 6 118 5.1E-45 T 11-10-2018 IPR014947 Protein of unknown function DUF1818 syc1331_c 54a084feb5ed7bc25268139030c88d24 115 SUPERFAMILY SSF50249 6 114 1.69E-26 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold syc1331_c 54a084feb5ed7bc25268139030c88d24 115 Pfam PF01588 Putative tRNA binding domain 17 112 7.3E-11 T 11-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 syc1331_c 54a084feb5ed7bc25268139030c88d24 115 Gene3D G3DSA:2.40.50.140 2 115 6.9E-26 T 11-10-2018 syc1331_c 54a084feb5ed7bc25268139030c88d24 115 TIGRFAM TIGR02222 chap_CsaA: export-related chaperone protein CsaA 10 114 5.4E-43 T 11-10-2018 IPR008231 Probable chaperone CsaA syc1127_c 941b831434717aea6defe85b89c3c4a8 168 Gene3D G3DSA:3.40.50.300 1 150 1.4E-31 T 11-10-2018 syc1127_c 941b831434717aea6defe85b89c3c4a8 168 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 6 114 2.5E-29 T 11-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 syc1127_c 941b831434717aea6defe85b89c3c4a8 168 SUPERFAMILY SSF52540 26 120 6.0E-16 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc1127_c 941b831434717aea6defe85b89c3c4a8 168 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 5 116 1.2E-30 T 11-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 syc0073_d 260ca576b79d74056322294adebdb907 128 Pfam PF03703 Bacterial PH domain 40 113 1.5E-14 T 11-10-2018 IPR005182 Domain of unknown function DUF304 syc2305_c 9aa2338e14ea40c65fd02bac891c5fbf 1568 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 1178 1568 1.4E-55 T 11-10-2018 IPR007452 Translocation and assembly module TamB syc2305_c 9aa2338e14ea40c65fd02bac891c5fbf 1568 Pfam PF13116 Protein of unknown function 237 337 2.3E-6 T 11-10-2018 IPR025263 Domain of unknown function DUF3971 syc2222_c d430225116f0774ecfe447a48b2f9669 482 Gene3D G3DSA:1.10.287.130 206 325 5.2E-26 T 11-10-2018 syc2222_c d430225116f0774ecfe447a48b2f9669 482 SMART SM00388 257 324 1.3E-20 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 syc2222_c d430225116f0774ecfe447a48b2f9669 482 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 368 476 8.9E-25 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase syc2222_c d430225116f0774ecfe447a48b2f9669 482 SUPERFAMILY SSF47384 240 325 7.26E-21 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 syc2222_c d430225116f0774ecfe447a48b2f9669 482 SMART SM00387 367 479 1.0E-35 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase syc2222_c d430225116f0774ecfe447a48b2f9669 482 Gene3D G3DSA:3.30.565.10 329 479 1.6E-42 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily syc2222_c d430225116f0774ecfe447a48b2f9669 482 SUPERFAMILY SSF55874 313 477 1.57E-45 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily syc2222_c d430225116f0774ecfe447a48b2f9669 482 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 457 1.2E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 syc2222_c d430225116f0774ecfe447a48b2f9669 482 PRINTS PR00344 Bacterial sensor protein C-terminal signature 404 418 1.2E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 syc2222_c d430225116f0774ecfe447a48b2f9669 482 PRINTS PR00344 Bacterial sensor protein C-terminal signature 463 476 1.2E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 syc2222_c d430225116f0774ecfe447a48b2f9669 482 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 432 1.2E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 syc2222_c d430225116f0774ecfe447a48b2f9669 482 Pfam PF00512 His Kinase A (phospho-acceptor) domain 258 324 1.8E-17 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 syc0118_d d32c3eb4068619a9d2cc1aff237af0bf 164 Pfam PF13581 Histidine kinase-like ATPase domain 38 140 7.7E-19 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase syc0118_d d32c3eb4068619a9d2cc1aff237af0bf 164 Gene3D G3DSA:3.30.565.10 14 148 2.4E-13 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily syc0118_d d32c3eb4068619a9d2cc1aff237af0bf 164 PIRSF PIRSF020906 1 160 4.6E-65 T 11-10-2018 IPR016781 Anti-sigma regulatory factor, PmgA, predicted syc0118_d d32c3eb4068619a9d2cc1aff237af0bf 164 SUPERFAMILY SSF55874 39 143 2.6E-14 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily syc1999_c 88ed846a2a516c8e7dd03bedaeae2743 133 Pfam PF02469 Fasciclin domain 14 131 8.3E-30 T 11-10-2018 IPR000782 FAS1 domain syc1999_c 88ed846a2a516c8e7dd03bedaeae2743 133 Gene3D G3DSA:2.30.180.10 1 132 1.1E-37 T 11-10-2018 IPR036378 FAS1 domain superfamily syc1999_c 88ed846a2a516c8e7dd03bedaeae2743 133 SUPERFAMILY SSF82153 4 131 3.4E-34 T 11-10-2018 IPR036378 FAS1 domain superfamily syc1999_c 88ed846a2a516c8e7dd03bedaeae2743 133 SMART SM00554 37 133 3.5E-26 T 11-10-2018 IPR000782 FAS1 domain syc1861_d b7bb90f1c1b5ea56b1d5c2325f2ed55a 144 Pfam PF01890 Cobalamin synthesis G C-terminus 8 129 9.9E-25 T 11-10-2018 IPR002750 CobE/GbiG C-terminal domain GO:0009236 syc1861_d b7bb90f1c1b5ea56b1d5c2325f2ed55a 144 SUPERFAMILY SSF159664 3 129 5.62E-24 T 11-10-2018 IPR036518 CobE/GbiG C-terminal domain superfamily GO:0009236 syc1861_d b7bb90f1c1b5ea56b1d5c2325f2ed55a 144 Gene3D G3DSA:3.30.420.180 1 134 3.4E-22 T 11-10-2018 IPR036518 CobE/GbiG C-terminal domain superfamily GO:0009236 syc0490_c 0b0126d3998ebf2f5e53dffd52679bc7 70 SUPERFAMILY SSF54285 7 69 1.26E-18 T 11-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp syc0490_c 0b0126d3998ebf2f5e53dffd52679bc7 70 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 7 70 4.1E-21 T 11-10-2018 IPR010035 ThiS, thiamine-biosynthesis syc0490_c 0b0126d3998ebf2f5e53dffd52679bc7 70 Pfam PF02597 ThiS family 8 70 1.0E-14 T 11-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 syc0490_c 0b0126d3998ebf2f5e53dffd52679bc7 70 Gene3D G3DSA:3.10.20.30 7 70 1.4E-19 T 11-10-2018 IPR012675 Beta-grasp domain superfamily syc0676_c 0d1c13cce0c7252d732435552a7be2f4 172 SUPERFAMILY SSF102405 23 144 1.01E-9 T 11-10-2018 syc0676_c 0d1c13cce0c7252d732435552a7be2f4 172 Gene3D G3DSA:3.40.50.450 19 165 5.9E-7 T 11-10-2018 syc1525_d 3a856de38fbe602882b28ab2f6603490 171 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 74 92 - T 11-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site syc1525_d 3a856de38fbe602882b28ab2f6603490 171 SUPERFAMILY SSF46785 27 155 6.08E-30 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily syc1525_d 3a856de38fbe602882b28ab2f6603490 171 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 26 153 5.5E-35 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type syc1525_d 3a856de38fbe602882b28ab2f6603490 171 Pfam PF02082 Transcriptional regulator 26 108 5.0E-27 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type syc1525_d 3a856de38fbe602882b28ab2f6603490 171 Gene3D G3DSA:1.10.10.10 26 165 4.2E-36 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily syc1232_d b774d45b43ab56ee4d19e9de9686ddd2 357 ProSitePatterns PS01348 MraY family signature 2. 166 177 - T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 syc1232_d b774d45b43ab56ee4d19e9de9686ddd2 357 Pfam PF00953 Glycosyl transferase family 4 90 246 2.0E-40 T 11-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 syc0507_c 5123cbd0e75b0e15cfed3cab21caf671 185 Gene3D G3DSA:3.40.1440.10 1 115 2.5E-30 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 syc1513_c 64fcc6f683152e49f9c96a20fb4f7854 159 Pfam PF01928 CYTH domain 3 136 4.2E-12 T 11-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 syc1513_c 64fcc6f683152e49f9c96a20fb4f7854 159 PIRSF PIRSF016487 1 158 1.7E-57 T 11-10-2018 IPR012042 Inorganic triphosphatase NeuTTM/CthTTM-like syc1513_c 64fcc6f683152e49f9c96a20fb4f7854 159 SUPERFAMILY SSF55154 1 148 7.36E-41 T 11-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 syc1513_c 64fcc6f683152e49f9c96a20fb4f7854 159 SMART SM01118 2 148 9.6E-24 T 11-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 syc1513_c 64fcc6f683152e49f9c96a20fb4f7854 159 Gene3D G3DSA:2.40.320.10 1 150 9.4E-44 T 11-10-2018 syc1118_c 3f044d0a23b0cf58de4e0b3cca961c39 463 Pfam PF12899 Alkaline and neutral invertase 22 451 1.9E-168 T 11-10-2018 IPR024746 Glycosyl hydrolase family 100 GO:0033926 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 syc1118_c 3f044d0a23b0cf58de4e0b3cca961c39 463 Gene3D G3DSA:1.50.10.10 269 443 8.8E-8 T 11-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 syc1118_c 3f044d0a23b0cf58de4e0b3cca961c39 463 Gene3D G3DSA:1.50.10.10 57 266 2.1E-9 T 11-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 syc1118_c 3f044d0a23b0cf58de4e0b3cca961c39 463 SUPERFAMILY SSF48208 29 449 5.35E-38 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 syc0346_d d446c7a3f849fe93785e953d8299abbc 104 SUPERFAMILY SSF143120 25 69 2.35E-12 T 11-10-2018 IPR036165 YefM-like superfamily syc0346_d d446c7a3f849fe93785e953d8299abbc 104 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 28 66 1.6E-9 T 11-10-2018 syc0346_d d446c7a3f849fe93785e953d8299abbc 104 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 25 82 2.7E-14 T 11-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM syc0346_d d446c7a3f849fe93785e953d8299abbc 104 Gene3D G3DSA:3.40.1620.10 23 63 8.7E-12 T 11-10-2018 syc1218_c 1ecc97d4c2c3afde76241a76f4dd94e7 277 Pfam PF01716 Manganese-stabilising protein / photosystem II polypeptide 32 272 4.4E-112 T 11-10-2018 IPR002628 Photosystem II PsbO, manganese-stabilising GO:0009654|GO:0010207|GO:0010242|GO:0042549 syc1218_c 1ecc97d4c2c3afde76241a76f4dd94e7 277 Gene3D G3DSA:3.30.2050.10 181 217 7.6E-89 T 11-10-2018 syc1218_c 1ecc97d4c2c3afde76241a76f4dd94e7 277 Gene3D G3DSA:2.40.160.30 66 272 7.6E-89 T 11-10-2018 syc1218_c 1ecc97d4c2c3afde76241a76f4dd94e7 277 SUPERFAMILY SSF56925 33 273 1.57E-99 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel syc2461_c d3d4b0c270d0e6115a1183fd4590175b 373 Pfam PF05982 Na+-dependent bicarbonate transporter superfamily 18 369 9.3E-104 T 11-10-2018 IPR010293 Na+-dependent bicarbonate transporter superfamily syc0466_c 4c320848cd6aeaefcc59a8f49d5a5593 458 SUPERFAMILY SSF53448 88 352 3.0E-48 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases syc0466_c 4c320848cd6aeaefcc59a8f49d5a5593 458 Gene3D G3DSA:3.90.550.10 85 304 6.9E-49 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases syc0466_c 4c320848cd6aeaefcc59a8f49d5a5593 458 Pfam PF13641 Glycosyltransferase like family 2 95 320 2.5E-32 T 11-10-2018 syc1940_d 2504db8c0f999136d68e76877eacde7f 419 Gene3D G3DSA:1.10.287.470 151 222 1.7E-7 T 11-10-2018 syc1940_d 2504db8c0f999136d68e76877eacde7f 419 SUPERFAMILY SSF111369 150 218 7.85E-6 T 11-10-2018 syc1940_d 2504db8c0f999136d68e76877eacde7f 419 Gene3D G3DSA:2.40.50.100 287 324 3.9E-10 T 11-10-2018 syc1940_d 2504db8c0f999136d68e76877eacde7f 419 Pfam PF13437 HlyD family secretion protein 287 381 5.9E-12 T 11-10-2018 syc1940_d 2504db8c0f999136d68e76877eacde7f 419 Gene3D G3DSA:1.10.287.470 257 286 3.9E-10 T 11-10-2018 syc1940_d 2504db8c0f999136d68e76877eacde7f 419 Gene3D G3DSA:2.40.30.170 325 382 3.9E-10 T 11-10-2018 syc2081_d 7b63e5ded99b65210e321c423a675831 197 Gene3D G3DSA:2.120.10.30 38 196 1.9E-25 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like syc2081_d 7b63e5ded99b65210e321c423a675831 197 SUPERFAMILY SSF82171 33 174 4.32E-23 T 11-10-2018 syc2081_d 7b63e5ded99b65210e321c423a675831 197 Pfam PF07676 WD40-like Beta Propeller Repeat 146 168 1.0E-5 T 11-10-2018 IPR011659 WD40-like Beta Propeller syc2081_d 7b63e5ded99b65210e321c423a675831 197 Pfam PF07676 WD40-like Beta Propeller Repeat 43 77 2.0E-4 T 11-10-2018 IPR011659 WD40-like Beta Propeller syc0103_c 1dc555a3b4254a15b25e53bb10859f52 375 SUPERFAMILY SSF53659 33 358 1.36E-95 T 11-10-2018 syc0103_c 1dc555a3b4254a15b25e53bb10859f52 375 Pfam PF02504 Fatty acid synthesis protein 34 352 8.9E-115 T 11-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 syc0103_c 1dc555a3b4254a15b25e53bb10859f52 375 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 34 357 7.2E-124 T 11-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 syc0103_c 1dc555a3b4254a15b25e53bb10859f52 375 Gene3D G3DSA:3.40.718.10 32 366 3.3E-125 T 11-10-2018 syc0103_c 1dc555a3b4254a15b25e53bb10859f52 375 PIRSF PIRSF002465 31 363 2.4E-128 T 11-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 syc0103_c 1dc555a3b4254a15b25e53bb10859f52 375 Hamap MF_00019 Phosphate acyltransferase [plsX]. 31 367 132.009 T 11-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 syc0513_c b9b432afd5b247a45f40894100d9f9b7 287 SUPERFAMILY SSF54001 8 267 3.38E-41 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily syc0513_c b9b432afd5b247a45f40894100d9f9b7 287 SMART SM00460 176 240 9.8E-18 T 11-10-2018 IPR002931 Transglutaminase-like syc0513_c b9b432afd5b247a45f40894100d9f9b7 287 Gene3D G3DSA:3.10.620.30 105 279 7.2E-29 T 11-10-2018 syc0513_c b9b432afd5b247a45f40894100d9f9b7 287 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 5 82 4.2E-19 T 11-10-2018 IPR013589 Bacterial transglutaminase-like, N-terminal syc0513_c b9b432afd5b247a45f40894100d9f9b7 287 Pfam PF01841 Transglutaminase-like superfamily 133 238 7.3E-20 T 11-10-2018 IPR002931 Transglutaminase-like syc1916_d 00c5c9d9f42be57de70fdd987a09da59 304 SMART SM00046 10 132 6.7E-4 T 11-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 syc1916_d 00c5c9d9f42be57de70fdd987a09da59 304 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 15 295 4.2E-50 T 11-10-2018 IPR005218 Diacylglycerol/lipid kinase syc1916_d 00c5c9d9f42be57de70fdd987a09da59 304 Gene3D G3DSA:3.40.50.10330 4 128 5.7E-30 T 11-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 syc1916_d 00c5c9d9f42be57de70fdd987a09da59 304 Pfam PF00781 Diacylglycerol kinase catalytic domain 11 127 2.9E-25 T 11-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 syc1916_d 00c5c9d9f42be57de70fdd987a09da59 304 SUPERFAMILY SSF111331 10 295 6.7E-73 T 11-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily syc1916_d 00c5c9d9f42be57de70fdd987a09da59 304 Gene3D G3DSA:2.60.200.40 129 288 8.6E-39 T 11-10-2018 syc1912_c 462ec37182077dcd1470031d18ce4f98 266 SUPERFAMILY SSF56235 2 253 1.54E-40 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal syc1912_c 462ec37182077dcd1470031d18ce4f98 266 Gene3D G3DSA:3.60.20.10 1 258 5.6E-87 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal syc1912_c 462ec37182077dcd1470031d18ce4f98 266 Pfam PF13230 Glutamine amidotransferases class-II 1 256 2.9E-94 T 11-10-2018 IPR026869 Putative glutamine amidotransferase type 2 syc1389_d 73de9298a198cd7533275f1b964dcff7 171 Gene3D G3DSA:2.60.120.10 11 137 3.1E-13 T 11-10-2018 IPR014710 RmlC-like jelly roll fold syc1389_d 73de9298a198cd7533275f1b964dcff7 171 SUPERFAMILY SSF51182 12 131 2.66E-15 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily syc2071_d a308a61c8371ecbd6b1986194c497e9f 290 SUPERFAMILY SSF117396 9 265 3.79E-72 T 11-10-2018 IPR036520 UPF0759 superfamily syc2071_d a308a61c8371ecbd6b1986194c497e9f 290 Gene3D G3DSA:3.20.20.410 3 268 3.2E-52 T 11-10-2018 IPR036520 UPF0759 superfamily syc2071_d a308a61c8371ecbd6b1986194c497e9f 290 Pfam PF01904 Protein of unknown function DUF72 26 263 1.8E-58 T 11-10-2018 IPR002763 Protein of unknown function DUF72 syc2024_d b43160debcc5dad127ae2fc22881e7b5 410 Pfam PF00482 Type II secretion system (T2SS), protein F 278 400 1.4E-31 T 11-10-2018 IPR018076 Type II secretion system F domain syc2024_d b43160debcc5dad127ae2fc22881e7b5 410 Pfam PF00482 Type II secretion system (T2SS), protein F 73 196 4.9E-34 T 11-10-2018 IPR018076 Type II secretion system F domain syc2024_d b43160debcc5dad127ae2fc22881e7b5 410 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 168 196 - T 11-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 syc2024_d b43160debcc5dad127ae2fc22881e7b5 410 Gene3D G3DSA:1.20.81.30 60 175 1.1E-31 T 11-10-2018 syc2024_d b43160debcc5dad127ae2fc22881e7b5 410 PRINTS PR00812 Bacterial general secretion pathway protein F signature 168 196 2.1E-12 T 11-10-2018 IPR003004 GspF/PilC family syc2024_d b43160debcc5dad127ae2fc22881e7b5 410 PRINTS PR00812 Bacterial general secretion pathway protein F signature 69 81 2.1E-12 T 11-10-2018 IPR003004 GspF/PilC family syc2024_d b43160debcc5dad127ae2fc22881e7b5 410 PRINTS PR00812 Bacterial general secretion pathway protein F signature 373 387 2.1E-12 T 11-10-2018 IPR003004 GspF/PilC family syc2024_d b43160debcc5dad127ae2fc22881e7b5 410 PRINTS PR00812 Bacterial general secretion pathway protein F signature 389 408 2.1E-12 T 11-10-2018 IPR003004 GspF/PilC family syc2024_d b43160debcc5dad127ae2fc22881e7b5 410 Gene3D G3DSA:1.20.81.30 261 373 5.2E-30 T 11-10-2018 syc1529_c 78d3a3337530ecc291a6b55396439ebc 122 TIGRFAM TIGR02008 fdx_plant: ferredoxin [2Fe-2S] 4 100 3.2E-27 T 11-10-2018 IPR010241 Ferredoxin [2Fe-2S], plant GO:0009055|GO:0022900|GO:0051537 syc1529_c 78d3a3337530ecc291a6b55396439ebc 122 Gene3D G3DSA:3.10.20.30 3 108 3.1E-28 T 11-10-2018 IPR012675 Beta-grasp domain superfamily syc1529_c 78d3a3337530ecc291a6b55396439ebc 122 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 43 51 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 syc1529_c 78d3a3337530ecc291a6b55396439ebc 122 SUPERFAMILY SSF54292 6 105 1.02E-29 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 syc1529_c 78d3a3337530ecc291a6b55396439ebc 122 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 15 85 4.3E-14 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 syc0816_d ce3e50dcb6ba4b66645bdf32f409b7f4 568 SUPERFAMILY SSF53187 387 565 5.34E-44 T 11-10-2018 syc0816_d ce3e50dcb6ba4b66645bdf32f409b7f4 568 SMART SM00287 206 264 1.6E-6 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type syc0816_d ce3e50dcb6ba4b66645bdf32f409b7f4 568 Gene3D G3DSA:2.30.30.40 202 262 4.0E-7 T 11-10-2018 syc0816_d ce3e50dcb6ba4b66645bdf32f409b7f4 568 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 389 561 4.2E-39 T 11-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 syc0816_d ce3e50dcb6ba4b66645bdf32f409b7f4 568 SMART SM00646 449 561 1.0E-22 T 11-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 syc0816_d ce3e50dcb6ba4b66645bdf32f409b7f4 568 Gene3D G3DSA:3.40.630.40 386 568 6.7E-40 T 11-10-2018 syc1432_d 0bfb356dc4616305d610a488a02db43c 217 Pfam PF09366 Protein of unknown function (DUF1997) 50 203 2.0E-41 T 11-10-2018 IPR018971 Protein of unknown function DUF1997 syc2097_d f8852c4629107bf6842c8e10e3f55423 95 SUPERFAMILY SSF54928 2 90 2.28E-30 T 11-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 syc2097_d f8852c4629107bf6842c8e10e3f55423 95 SMART SM00360 2 75 2.3E-26 T 11-10-2018 IPR000504 RNA recognition motif domain GO:0003676 syc2097_d f8852c4629107bf6842c8e10e3f55423 95 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 3 73 1.0E-19 T 11-10-2018 IPR000504 RNA recognition motif domain GO:0003676 syc2097_d f8852c4629107bf6842c8e10e3f55423 95 Gene3D G3DSA:3.30.70.330 1 88 7.4E-29 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily syc2275_c 6cd847dca0ab74ef3bb7c5782ea91629 194 Pfam PF01872 RibD C-terminal domain 20 178 5.1E-20 T 11-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 syc2275_c 6cd847dca0ab74ef3bb7c5782ea91629 194 SUPERFAMILY SSF53597 15 187 5.37E-41 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 syc2275_c 6cd847dca0ab74ef3bb7c5782ea91629 194 Gene3D G3DSA:3.40.430.10 18 183 4.2E-46 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 syc2468_d 7955a7d1859cb24aa69a10ea8ecc5d12 521 Pfam PF11850 Protein of unknown function (DUF3370) 79 501 2.0E-180 T 11-10-2018 IPR021801 Protein of unknown function DUF3370 syc1791_d 3ba1c26a5a81254380c78ba111c3292b 270 SUPERFAMILY SSF54427 42 120 9.4E-7 T 11-10-2018 IPR032710 NTF2-like domain superfamily syc0982_c d3e116d39e52d67218b30bc58697ce99 249 Pfam PF02517 CAAX protease self-immunity 133 242 2.5E-9 T 11-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 syc1687_c 1e78be470d924b2fbcf1349cc0f6b390 174 SUPERFAMILY SSF51182 11 143 5.04E-7 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily syc2188_d 069706012abf0d5bc5d39d6bdb2b7705 358 SUPERFAMILY SSF47240 85 224 1.44E-17 T 11-10-2018 IPR009078 Ferritin-like superfamily syc2188_d 069706012abf0d5bc5d39d6bdb2b7705 358 Pfam PF02915 Rubrerythrin 89 222 1.9E-41 T 11-10-2018 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 syc2188_d 069706012abf0d5bc5d39d6bdb2b7705 358 Hamap MF_01840 Aerobic magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase [acsF]. 10 358 54.154 T 11-10-2018 IPR008434 Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase GO:0015979|GO:0015995|GO:0046872|GO:0048529 KEGG: 00860+1.14.13.81 syc2188_d 069706012abf0d5bc5d39d6bdb2b7705 358 TIGRFAM TIGR02029 AcsF: magnesium-protoporphyrin IX monomethyl ester aerobic oxidative cyclase 15 349 8.4E-157 T 11-10-2018 IPR008434 Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase GO:0015979|GO:0015995|GO:0046872|GO:0048529 KEGG: 00860+1.14.13.81 syc0335_c b255dde2357928c2c1b73c53a4c83f36 335 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 10 87 3.2E-5 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 syc0335_c b255dde2357928c2c1b73c53a4c83f36 335 Gene3D G3DSA:1.10.540.10 6 100 7.4E-11 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 syc0335_c b255dde2357928c2c1b73c53a4c83f36 335 SUPERFAMILY SSF56645 11 194 1.44E-20 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 syc1595_d 84f77347f4aa2c15b628f23362f80659 167 Gene3D G3DSA:3.30.530.20 3 151 1.2E-36 T 11-10-2018 IPR023393 START-like domain superfamily syc1595_d 84f77347f4aa2c15b628f23362f80659 167 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 129 3.1E-9 T 11-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 syc1595_d 84f77347f4aa2c15b628f23362f80659 167 SUPERFAMILY SSF55961 1 150 1.14E-25 T 11-10-2018 syc2095_d e96a4924bcb3671cad3a3cf21544bebd 275 SUPERFAMILY SSF63848 169 270 1.11E-29 T 11-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 syc2095_d e96a4924bcb3671cad3a3cf21544bebd 275 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 44 271 17.018 T 11-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 syc2095_d e96a4924bcb3671cad3a3cf21544bebd 275 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 171 267 9.2E-30 T 11-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 syc2095_d e96a4924bcb3671cad3a3cf21544bebd 275 Gene3D G3DSA:2.160.20.70 166 273 2.5E-36 T 11-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 syc1287_c 3fe7587e9386971d24508a07d5c51e8c 91 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 3 89 20.88 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 syc1287_c 3fe7587e9386971d24508a07d5c51e8c 91 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 5 51 8.9E-21 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 syc1287_c 3fe7587e9386971d24508a07d5c51e8c 91 Pfam PF02416 mttA/Hcf106 family 6 55 1.6E-22 T 11-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 syc1287_c 3fe7587e9386971d24508a07d5c51e8c 91 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 23 42 7.4E-7 T 11-10-2018 syc1287_c 3fe7587e9386971d24508a07d5c51e8c 91 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 3 23 7.4E-7 T 11-10-2018 syc1465_d ce40e8aed04cda1d1a080bf8310e627e 117 Pfam PF01934 Protein of unknown function DUF86 11 106 1.7E-22 T 11-10-2018 IPR008201 Protein of unknown function DUF86 syc0989_d ab4b6735d128b58bd008d914d5527a2c 117 Pfam PF01927 Mut7-C RNAse domain 1 75 7.8E-9 T 11-10-2018 IPR002782 Mut7-C RNAse domain syc1083_c 889aac6736147369dca1ec59c7b54e28 335 Pfam PF03773 Predicted permease 5 332 1.6E-76 T 11-10-2018 IPR005524 Predicted permease DUF318 syc1133_d ed48db0982dc77780870c2bc23ba43ab 104 Pfam PF10825 Protein of unknown function (DUF2752) 2 45 6.6E-12 T 11-10-2018 IPR021215 Protein of unknown function DUF2752 syc1075_d fa4d4b584f6831eaa84d99711185e343 413 Pfam PF00395 S-layer homology domain 161 205 1.2E-5 T 11-10-2018 IPR001119 S-layer homology domain syc1075_d fa4d4b584f6831eaa84d99711185e343 413 Pfam PF00395 S-layer homology domain 36 79 1.3E-17 T 11-10-2018 IPR001119 S-layer homology domain syc1075_d fa4d4b584f6831eaa84d99711185e343 413 Pfam PF00395 S-layer homology domain 96 138 2.5E-11 T 11-10-2018 IPR001119 S-layer homology domain syc1908_d 476c0a2c5efec55f8b39013bccc82b6a 467 Gene3D G3DSA:3.60.120.10 11 467 2.9E-104 T 11-10-2018 IPR005801 ADC synthase GO:0009058 syc1908_d 476c0a2c5efec55f8b39013bccc82b6a 467 SUPERFAMILY SSF56322 32 466 9.68E-92 T 11-10-2018 IPR005801 ADC synthase GO:0009058 syc1908_d 476c0a2c5efec55f8b39013bccc82b6a 467 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 115 465 3.6E-96 T 11-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 syc1908_d 476c0a2c5efec55f8b39013bccc82b6a 467 Pfam PF00425 chorismate binding enzyme 205 458 3.5E-67 T 11-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal syc0459_d 2181fda6bd952c99efcef24ec7a7ee09 265 Pfam PF04536 TPM domain 41 135 3.0E-6 T 11-10-2018 IPR007621 TPM domain syc2365_d 55f4bf459c6420ffc1063d52d6915ccd 163 TIGRFAM TIGR00077 lspA: signal peptidase II 5 148 3.2E-41 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 syc2365_d 55f4bf459c6420ffc1063d52d6915ccd 163 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 4 154 14.103 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 syc2365_d 55f4bf459c6420ffc1063d52d6915ccd 163 Pfam PF01252 Signal peptidase (SPase) II 16 148 4.6E-35 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 syc2365_d 55f4bf459c6420ffc1063d52d6915ccd 163 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 129 145 8.3E-14 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 syc2365_d 55f4bf459c6420ffc1063d52d6915ccd 163 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 95 110 8.3E-14 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 syc2365_d 55f4bf459c6420ffc1063d52d6915ccd 163 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 51 59 8.3E-14 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 syc2365_d 55f4bf459c6420ffc1063d52d6915ccd 163 ProSitePatterns PS00855 Signal peptidases II signature. 98 110 - T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 syc1136_c 8228d56b181902842dafe187d1712f67 264 Pfam PF02405 Permease MlaE 42 251 1.2E-75 T 11-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 syc1136_c 8228d56b181902842dafe187d1712f67 264 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 8 255 9.1E-87 T 11-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria syc1100_c 2324fa48c1d31bea579a807c3545b455 502 Gene3D G3DSA:3.40.50.300 221 395 1.6E-34 T 11-10-2018 syc1100_c 2324fa48c1d31bea579a807c3545b455 502 Gene3D G3DSA:1.10.8.60 396 466 3.5E-12 T 11-10-2018 syc1100_c 2324fa48c1d31bea579a807c3545b455 502 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 262 393 1.5E-24 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 syc1100_c 2324fa48c1d31bea579a807c3545b455 502 SMART SM00382 258 396 5.1E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain syc1100_c 2324fa48c1d31bea579a807c3545b455 502 SUPERFAMILY SSF52540 223 464 4.05E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc1462_c c124145ca50fb073bd8520e7d754275e 308 SUPERFAMILY SSF47240 93 268 2.66E-21 T 11-10-2018 IPR009078 Ferritin-like superfamily syc2309_c c0ad4c3bc3e2fd70752412b20b259887 275 Pfam PF04542 Sigma-70 region 2 46 112 1.5E-15 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 syc2309_c c0ad4c3bc3e2fd70752412b20b259887 275 Gene3D G3DSA:1.10.10.10 188 269 9.3E-14 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily syc2309_c c0ad4c3bc3e2fd70752412b20b259887 275 Gene3D G3DSA:1.10.10.10 115 168 4.0E-9 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily syc2309_c c0ad4c3bc3e2fd70752412b20b259887 275 Gene3D G3DSA:1.20.120.1810 17 114 3.8E-18 T 11-10-2018 syc2309_c c0ad4c3bc3e2fd70752412b20b259887 275 Pfam PF08281 Sigma-70, region 4 209 262 1.1E-10 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 syc2309_c c0ad4c3bc3e2fd70752412b20b259887 275 SUPERFAMILY SSF88946 25 113 7.22E-28 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 syc2309_c c0ad4c3bc3e2fd70752412b20b259887 275 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 41 266 3.7E-30 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 syc2309_c c0ad4c3bc3e2fd70752412b20b259887 275 SUPERFAMILY SSF88659 119 196 4.8E-14 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like syc2309_c c0ad4c3bc3e2fd70752412b20b259887 275 SUPERFAMILY SSF88659 184 268 5.42E-13 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like syc0880_c 12eb906bee51538e0b4000cc5ff7c30b 208 Pfam PF03734 L,D-transpeptidase catalytic domain 87 205 4.1E-24 T 11-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 syc0880_c 12eb906bee51538e0b4000cc5ff7c30b 208 SUPERFAMILY SSF141523 81 206 8.76E-35 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like syc0880_c 12eb906bee51538e0b4000cc5ff7c30b 208 Gene3D G3DSA:2.40.440.10 48 208 9.9E-48 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like syc1539_c 2a3242e9d154e4be0efa9dd485b7919c 625 SUPERFAMILY SSF56601 234 625 1.38E-126 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like syc1539_c 2a3242e9d154e4be0efa9dd485b7919c 625 Pfam PF00912 Transglycosylase 66 249 3.1E-62 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 syc1539_c 2a3242e9d154e4be0efa9dd485b7919c 625 Gene3D G3DSA:1.10.3810.10 59 265 4.3E-69 T 11-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 syc1539_c 2a3242e9d154e4be0efa9dd485b7919c 625 Gene3D G3DSA:3.40.710.10 273 625 1.1E-128 T 11-10-2018 syc1539_c 2a3242e9d154e4be0efa9dd485b7919c 625 SUPERFAMILY SSF53955 53 270 2.05E-72 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily syc1539_c 2a3242e9d154e4be0efa9dd485b7919c 625 Pfam PF00905 Penicillin binding protein transpeptidase domain 341 611 7.9E-41 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 syc1539_c 2a3242e9d154e4be0efa9dd485b7919c 625 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 77 615 3.0E-188 T 11-10-2018 syc1282_d ceaf8d37b1242516673f79154f8d3e5f 174 Pfam PF00583 Acetyltransferase (GNAT) family 38 137 3.5E-9 T 11-10-2018 IPR000182 GNAT domain syc1282_d ceaf8d37b1242516673f79154f8d3e5f 174 Gene3D G3DSA:3.40.630.30 7 171 2.3E-50 T 11-10-2018 syc1282_d ceaf8d37b1242516673f79154f8d3e5f 174 SUPERFAMILY SSF55729 5 167 5.75E-29 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase syc0433_c 1c086b143989d54f9fdadffaea31bb97 402 Gene3D G3DSA:3.40.50.1260 174 390 1.2E-160 T 11-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc0433_c 1c086b143989d54f9fdadffaea31bb97 402 Pfam PF00162 Phosphoglycerate kinase 11 390 1.8E-164 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc0433_c 1c086b143989d54f9fdadffaea31bb97 402 PRINTS PR00477 Phosphoglycerate kinase family signature 113 128 7.9E-99 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc0433_c 1c086b143989d54f9fdadffaea31bb97 402 PRINTS PR00477 Phosphoglycerate kinase family signature 353 364 7.9E-99 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc0433_c 1c086b143989d54f9fdadffaea31bb97 402 PRINTS PR00477 Phosphoglycerate kinase family signature 35 57 7.9E-99 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc0433_c 1c086b143989d54f9fdadffaea31bb97 402 PRINTS PR00477 Phosphoglycerate kinase family signature 376 393 7.9E-99 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc0433_c 1c086b143989d54f9fdadffaea31bb97 402 PRINTS PR00477 Phosphoglycerate kinase family signature 13 29 7.9E-99 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc0433_c 1c086b143989d54f9fdadffaea31bb97 402 PRINTS PR00477 Phosphoglycerate kinase family signature 317 342 7.9E-99 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc0433_c 1c086b143989d54f9fdadffaea31bb97 402 PRINTS PR00477 Phosphoglycerate kinase family signature 141 163 7.9E-99 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc0433_c 1c086b143989d54f9fdadffaea31bb97 402 PRINTS PR00477 Phosphoglycerate kinase family signature 195 214 7.9E-99 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc0433_c 1c086b143989d54f9fdadffaea31bb97 402 PRINTS PR00477 Phosphoglycerate kinase family signature 172 194 7.9E-99 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc0433_c 1c086b143989d54f9fdadffaea31bb97 402 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 18 28 - T 11-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc0433_c 1c086b143989d54f9fdadffaea31bb97 402 SUPERFAMILY SSF53748 8 400 4.59E-160 T 11-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc0433_c 1c086b143989d54f9fdadffaea31bb97 402 PIRSF PIRSF000724 2 402 5.4E-152 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc0433_c 1c086b143989d54f9fdadffaea31bb97 402 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 400 42.368 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc0433_c 1c086b143989d54f9fdadffaea31bb97 402 Gene3D G3DSA:3.40.50.1260 12 398 1.2E-160 T 11-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 syc2489_d 1a87c96cc42396cb7cf6def2e8398edf 462 Pfam PF10009 Uncharacterized protein conserved in bacteria (DUF2252) 60 448 1.0E-153 T 11-10-2018 IPR018721 Protein of unknown function DUF2252 syc0876_d cc48a1dd48b60f9186eacf65819b1220 529 SUPERFAMILY SSF51905 60 372 5.83E-16 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc0876_d cc48a1dd48b60f9186eacf65819b1220 529 Gene3D G3DSA:3.50.50.60 53 390 7.3E-13 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc2262_d c5b655e4d90300efad7ce56cd005773d 149 Pfam PF14159 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase 66 147 2.2E-31 T 11-10-2018 IPR025564 Cyanobacterial aminoacyl-tRNA synthetase, CAAD domain syc0168_c 6e74e68f478b2b3de723a6c8c3bb3ede 275 TIGRFAM TIGR00268 TIGR00268: TIGR00268 family protein 5 261 5.5E-94 T 11-10-2018 IPR005232 Pyridinium-3,5-bisthiocarboxylic acid mononucleotide synthase LarE GO:0016783 syc0168_c 6e74e68f478b2b3de723a6c8c3bb3ede 275 Pfam PF00733 Asparagine synthase 7 83 4.3E-9 T 11-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 syc0168_c 6e74e68f478b2b3de723a6c8c3bb3ede 275 SUPERFAMILY SSF52402 7 221 3.39E-37 T 11-10-2018 syc0168_c 6e74e68f478b2b3de723a6c8c3bb3ede 275 PIRSF PIRSF006661 1 271 9.2E-105 T 11-10-2018 IPR005232 Pyridinium-3,5-bisthiocarboxylic acid mononucleotide synthase LarE GO:0016783 syc0168_c 6e74e68f478b2b3de723a6c8c3bb3ede 275 Gene3D G3DSA:3.40.50.620 1 166 1.5E-23 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold syc1383_d ad2737385edcac766605f9a44d99e9b0 161 Gene3D G3DSA:3.40.140.10 4 161 3.1E-55 T 11-10-2018 syc1383_d ad2737385edcac766605f9a44d99e9b0 161 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 57 94 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 syc1383_d ad2737385edcac766605f9a44d99e9b0 161 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 5 105 7.9E-27 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain syc1383_d ad2737385edcac766605f9a44d99e9b0 161 SUPERFAMILY SSF53927 3 158 4.78E-47 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 syc0134_c f0d6da3eb46e5dcf6114fc6e3e0ca288 99 ProDom PD012510 UTILIZATION ETHANOLAMINE CARBOXYSOME CCML PEPTIDE EUTN/CARBOXYSOME STRUCTURAL EUTN A B 11 83 2.0E-36 T 11-10-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml syc0134_c f0d6da3eb46e5dcf6114fc6e3e0ca288 99 Gene3D G3DSA:2.40.50.220 1 99 2.3E-37 T 11-10-2018 IPR036677 EutN/Ccml superfamily syc0134_c f0d6da3eb46e5dcf6114fc6e3e0ca288 99 Pfam PF03319 Ethanolamine utilisation protein EutN/carboxysome 1 83 3.4E-31 T 11-10-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml syc0134_c f0d6da3eb46e5dcf6114fc6e3e0ca288 99 SUPERFAMILY SSF159133 1 95 1.96E-32 T 11-10-2018 IPR036677 EutN/Ccml superfamily syc0077_d fc26ee6e8a1f0a5e1a877097bde9cc70 75 Pfam PF02620 Uncharacterized ACR, COG1399 7 69 1.5E-9 T 11-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD syc0835_d abd0b5528ceb3e8078966c46c2f437f2 168 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 154 80.771 T 11-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 syc0835_d abd0b5528ceb3e8078966c46c2f437f2 168 Pfam PF03477 ATP cone domain 49 135 1.4E-19 T 11-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 syc0835_d abd0b5528ceb3e8078966c46c2f437f2 168 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 6.8E-63 T 11-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 syc0235_c 38541f9e581615b6e56d911af01d629b 283 SUPERFAMILY SSF81345 4 262 1.05E-34 T 11-10-2018 IPR037294 ABC transporter, BtuC-like syc0235_c 38541f9e581615b6e56d911af01d629b 283 Pfam PF00950 ABC 3 transport family 12 266 1.2E-62 T 11-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 syc0068_c 889d3c937814de4814edcb6cefb82791 97 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 10 92 2.7E-32 T 11-10-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 syc1249_c 6fa44ec105e5eb3d4ba785bc49022083 251 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 21 249 41.999 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 syc1249_c 6fa44ec105e5eb3d4ba785bc49022083 251 SUPERFAMILY SSF64005 19 244 1.7E-91 T 11-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 syc1249_c 6fa44ec105e5eb3d4ba785bc49022083 251 Gene3D G3DSA:3.40.1180.10 10 249 3.1E-100 T 11-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 syc1249_c 6fa44ec105e5eb3d4ba785bc49022083 251 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 21 248 1.1E-100 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 syc1249_c 6fa44ec105e5eb3d4ba785bc49022083 251 Pfam PF01255 Putative undecaprenyl diphosphate synthase 28 248 3.8E-85 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 syc1249_c 6fa44ec105e5eb3d4ba785bc49022083 251 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 194 211 - T 11-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 syc1942_c befdbbeebb355980e211d1fee0de78d0 347 Pfam PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family 25 311 3.1E-49 T 11-10-2018 IPR029132 Choloylglycine hydrolase/NAAA C-terminal syc1942_c befdbbeebb355980e211d1fee0de78d0 347 SUPERFAMILY SSF56235 25 327 3.09E-99 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal syc1942_c befdbbeebb355980e211d1fee0de78d0 347 Gene3D G3DSA:3.60.60.10 22 341 4.9E-127 T 11-10-2018 syc2328_c e276f15ef64caaff9a6f1c1a7dde2c2c 122 TIGRFAM TIGR04042 MSMEG_0570_fam: MSMEG_0570 family protein 24 107 2.8E-31 T 11-10-2018 IPR023846 Conserved hypothetical protein CHP04042, MSMEG0570 syc0197_d 3977cf454b05f4283210891265b41b34 636 SMART SM00091 500 566 2.1E-11 T 11-10-2018 IPR000014 PAS domain syc0197_d 3977cf454b05f4283210891265b41b34 636 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 504 614 8.2E-19 T 11-10-2018 IPR000014 PAS domain syc0197_d 3977cf454b05f4283210891265b41b34 636 Pfam PF08447 PAS fold 523 591 1.1E-13 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 syc0197_d 3977cf454b05f4283210891265b41b34 636 SUPERFAMILY SSF55785 505 610 4.34E-22 T 11-10-2018 IPR035965 PAS domain superfamily syc0197_d 3977cf454b05f4283210891265b41b34 636 Gene3D G3DSA:3.30.450.20 498 629 8.9E-24 T 11-10-2018 syc2325_d 602ffc8e9005898b08fdf8ddfc005345 470 PIRSF PIRSF006446 12 467 9.5E-144 T 11-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 syc2325_d 602ffc8e9005898b08fdf8ddfc005345 470 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 19 451 6.5E-148 T 11-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 syc0350_d 1da7c385157e16930fa649b77559aebe 306 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 5 274 9.4E-42 T 11-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD syc0350_d 1da7c385157e16930fa649b77559aebe 306 TIGRFAM TIGR00374 TIGR00374: TIGR00374 family protein 2 279 3.2E-17 T 11-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD syc1162_c ee7388323c1c7a07fc1733d62814e692 377 Pfam PF02470 MlaD protein 38 113 3.7E-14 T 11-10-2018 IPR003399 Mce/MlaD syc0715_c d961a19d0e6f4f875aef0c898f27f57c 568 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 244 538 7.9E-85 T 11-10-2018 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal syc0715_c d961a19d0e6f4f875aef0c898f27f57c 568 SUPERFAMILY SSF55729 355 538 1.01E-12 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase syc1976_d 480beb777f480c718c955aeb9ba3873f 286 Gene3D G3DSA:3.40.50.1820 60 282 8.0E-39 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold syc1976_d 480beb777f480c718c955aeb9ba3873f 286 Pfam PF12146 Serine aminopeptidase, S33 81 203 2.6E-15 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 syc1976_d 480beb777f480c718c955aeb9ba3873f 286 SUPERFAMILY SSF53474 17 278 5.7E-45 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold syc0797_c 8b368bac1febb9fe652aa79562f1a62c 624 Pfam PF04586 Caudovirus prohead serine protease 77 171 5.5E-5 T 11-10-2018 IPR006433 Prohead protease syc0797_c 8b368bac1febb9fe652aa79562f1a62c 624 Pfam PF10124 Mu-like prophage major head subunit gpT 483 551 5.9E-5 T 11-10-2018 IPR018774 Bacteriophage Mu, GpT syc0605_d 09c1d04a292fc75fb135492a594faaf1 230 SMART SM00849 12 171 6.8E-24 T 11-10-2018 IPR001279 Metallo-beta-lactamase syc0605_d 09c1d04a292fc75fb135492a594faaf1 230 Pfam PF00753 Metallo-beta-lactamase superfamily 14 171 1.4E-11 T 11-10-2018 IPR001279 Metallo-beta-lactamase syc0605_d 09c1d04a292fc75fb135492a594faaf1 230 SUPERFAMILY SSF56281 1 225 2.38E-54 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like syc0605_d 09c1d04a292fc75fb135492a594faaf1 230 Gene3D G3DSA:3.60.15.10 1 230 3.5E-76 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like syc0509_c e6d76c1fe8bd5e2844f77747c06ee883 195 Gene3D G3DSA:3.40.1000.10 28 185 8.8E-36 T 11-10-2018 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich syc0509_c e6d76c1fe8bd5e2844f77747c06ee883 195 SUPERFAMILY SSF55724 37 184 5.75E-26 T 11-10-2018 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich syc0509_c e6d76c1fe8bd5e2844f77747c06ee883 195 Pfam PF01789 PsbP 42 184 8.4E-34 T 11-10-2018 IPR002683 PsbP family GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898 syc1844_d d46f1ecaf8cae9fb9f51bd481ab10707 452 Pfam PF11850 Protein of unknown function (DUF3370) 36 424 9.4E-75 T 11-10-2018 IPR021801 Protein of unknown function DUF3370 syc1082_c dd90086f5ba3ae645fc789e081385f92 251 TIGRFAM TIGR03943 TIGR03943: TIGR03943 family protein 33 249 2.7E-67 T 11-10-2018 IPR015402 Protein of unknown function DUF1980 syc1082_c dd90086f5ba3ae645fc789e081385f92 251 Pfam PF09323 Domain of unknown function (DUF1980) 17 133 1.7E-7 T 11-10-2018 IPR015402 Protein of unknown function DUF1980 syc2378_c 4abce4953220b965a2dd8073a94b07bf 286 Pfam PF00487 Fatty acid desaturase 34 266 5.7E-38 T 11-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 syc2327_d 96940d0a305d715b465e7d98bec3e11f 224 SUPERFAMILY SSF54523 79 152 2.04E-5 T 11-10-2018 syc0548_c 15f9347b730f00be374e59c5c46f1a0a 328 SUPERFAMILY SSF52540 45 296 1.11E-25 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0548_c 15f9347b730f00be374e59c5c46f1a0a 328 Gene3D G3DSA:3.40.50.300 62 327 2.1E-62 T 11-10-2018 syc0829_c 924836036930a8d2f29c25f166cc9cea 153 SUPERFAMILY SSF54637 12 144 3.65E-33 T 11-10-2018 IPR029069 HotDog domain superfamily syc0829_c 924836036930a8d2f29c25f166cc9cea 153 ProSitePatterns PS01328 4-hydroxybenzoyl-CoA thioesterase family active site. 20 37 - T 11-10-2018 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site GO:0016787 syc0829_c 924836036930a8d2f29c25f166cc9cea 153 PIRSF PIRSF003230 8 149 4.3E-21 T 11-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 syc0829_c 924836036930a8d2f29c25f166cc9cea 153 Gene3D G3DSA:3.10.129.10 8 150 6.6E-31 T 11-10-2018 syc0829_c 924836036930a8d2f29c25f166cc9cea 153 Pfam PF03061 Thioesterase superfamily 30 114 2.5E-14 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 syc2250_d 4b94c17c4d990ff05a20c6c5f0ddd7d0 174 PIRSF PIRSF027377 24 161 1.7E-58 T 11-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 syc2250_d 4b94c17c4d990ff05a20c6c5f0ddd7d0 174 Hamap MF_00818 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 174 73.696 T 11-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 syc2250_d 4b94c17c4d990ff05a20c6c5f0ddd7d0 174 SUPERFAMILY SSF55620 8 153 8.15E-29 T 11-10-2018 syc2250_d 4b94c17c4d990ff05a20c6c5f0ddd7d0 174 Gene3D G3DSA:3.30.1130.10 39 159 1.8E-40 T 11-10-2018 syc2250_d 4b94c17c4d990ff05a20c6c5f0ddd7d0 174 TIGRFAM TIGR03139 QueF-II: 7-cyano-7-deazaguanine reductase 44 154 9.3E-50 T 11-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 syc2250_d 4b94c17c4d990ff05a20c6c5f0ddd7d0 174 Pfam PF14489 QueF-like protein 78 156 5.7E-32 T 11-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 syc2128_c b1ffb03494192c4e59f3640040dc6933 297 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 20 289 17.19 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 syc2128_c b1ffb03494192c4e59f3640040dc6933 297 Pfam PF02673 Bacitracin resistance protein BacA 25 283 1.2E-74 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 syc2128_c b1ffb03494192c4e59f3640040dc6933 297 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 25 282 1.1E-80 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 syc0761_d 362f655ef57a3917921bfdc69f7413c0 159 Pfam PF02681 Divergent PAP2 family 10 145 2.5E-48 T 11-10-2018 IPR003832 Protein of unknown function DUF212 syc2333_d ca7dd3561bf952e849685ab6f8ec61a4 56 SUPERFAMILY SSF103511 11 55 3.79E-13 T 11-10-2018 syc2333_d ca7dd3561bf952e849685ab6f8ec61a4 56 Pfam PF00504 Chlorophyll A-B binding protein 16 46 3.7E-5 T 11-10-2018 IPR022796 Chlorophyll A-B binding protein syc0629_d e1786c9e128f4f20ef17f5daddb20b25 164 SUPERFAMILY SSF55729 10 154 9.14E-32 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase syc0629_d e1786c9e128f4f20ef17f5daddb20b25 164 Gene3D G3DSA:3.40.630.30 8 163 6.2E-30 T 11-10-2018 syc0629_d e1786c9e128f4f20ef17f5daddb20b25 164 Pfam PF00583 Acetyltransferase (GNAT) family 36 143 1.4E-16 T 11-10-2018 IPR000182 GNAT domain syc1173_c 448389fc98caa6f1819ce4b19220d6ae 193 Pfam PF02517 CAAX protease self-immunity 92 178 1.2E-16 T 11-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 syc1042_d 970afba32ee531dc55af6f4cc979782b 99 Pfam PF02325 YGGT family 15 82 1.9E-21 T 11-10-2018 IPR003425 CCB3/YggT GO:0016020 syc0436_d 706b733f2459a7237cf48669be3053a1 363 Pfam PF01594 AI-2E family transporter 16 334 2.9E-53 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like syc2129_c b27c1b84cd051ca925dc8e37918ef80f 85 Gene3D G3DSA:3.90.940.40 11 81 2.2E-23 T 11-10-2018 IPR038150 Protein CHLORORESPIRATORY REDUCTION 7-like superfamily syc2129_c b27c1b84cd051ca925dc8e37918ef80f 85 Pfam PF12095 Protein CHLORORESPIRATORY REDUCTION 7 1 84 1.4E-28 T 11-10-2018 IPR021954 Protein CHLORORESPIRATORY REDUCTION 7 syc0494_c 965cb366ec7aa22db8c4df06dceb6ae2 273 SUPERFAMILY SSF48371 145 235 1.07E-9 T 11-10-2018 IPR016024 Armadillo-type fold syc0494_c 965cb366ec7aa22db8c4df06dceb6ae2 273 Gene3D G3DSA:1.25.10.10 140 271 4.5E-8 T 11-10-2018 IPR011989 Armadillo-like helical syc0494_c 965cb366ec7aa22db8c4df06dceb6ae2 273 Gene3D G3DSA:1.25.10.10 3 133 4.2E-22 T 11-10-2018 IPR011989 Armadillo-like helical syc0494_c 965cb366ec7aa22db8c4df06dceb6ae2 273 Pfam PF13646 HEAT repeats 66 129 4.2E-13 T 11-10-2018 syc0494_c 965cb366ec7aa22db8c4df06dceb6ae2 273 SMART SM00567 E-Z type HEAT repeats 66 95 5.5E-6 T 11-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 syc0494_c 965cb366ec7aa22db8c4df06dceb6ae2 273 SMART SM00567 E-Z type HEAT repeats 97 126 3.3E-4 T 11-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 syc0494_c 965cb366ec7aa22db8c4df06dceb6ae2 273 SMART SM00567 E-Z type HEAT repeats 171 201 0.43 T 11-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 syc0494_c 965cb366ec7aa22db8c4df06dceb6ae2 273 SMART SM00567 E-Z type HEAT repeats 26 57 3.2E-5 T 11-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 syc0494_c 965cb366ec7aa22db8c4df06dceb6ae2 273 SMART SM00567 E-Z type HEAT repeats 203 232 680.0 T 11-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 syc0494_c 965cb366ec7aa22db8c4df06dceb6ae2 273 SMART SM00567 E-Z type HEAT repeats 139 169 98.0 T 11-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 syc0494_c 965cb366ec7aa22db8c4df06dceb6ae2 273 SUPERFAMILY SSF48371 15 126 3.41E-19 T 11-10-2018 IPR016024 Armadillo-type fold syc0494_c 965cb366ec7aa22db8c4df06dceb6ae2 273 Pfam PF03130 PBS lyase HEAT-like repeat 29 56 2.6E-6 T 11-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 syc2455_c 60c51509812b766a6925133f20912baa 219 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 92 206 1.1E-18 T 11-10-2018 IPR007182 Na+/H+ antiporter MnhB subunit-related protein syc0956_c dc4d7e593a775bcae5d7d2df945b7378 256 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 20 218 2.1E-21 T 11-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 syc0956_c dc4d7e593a775bcae5d7d2df945b7378 256 Gene3D G3DSA:3.90.1070.10 96 172 2.4E-30 T 11-10-2018 syc0956_c dc4d7e593a775bcae5d7d2df945b7378 256 Gene3D G3DSA:3.40.50.1000 19 225 2.4E-30 T 11-10-2018 IPR023214 HAD superfamily syc0956_c dc4d7e593a775bcae5d7d2df945b7378 256 SUPERFAMILY SSF56784 17 220 2.3E-28 T 11-10-2018 IPR036412 HAD-like superfamily syc0956_c dc4d7e593a775bcae5d7d2df945b7378 256 Pfam PF05116 Sucrose-6F-phosphate phosphohydrolase 19 224 1.8E-14 T 11-10-2018 IPR006380 Sucrose-phosphatase-like, N-terminal syc1055_d 8de6b77ef44cd713d039cf180eaa6fa9 189 SMART SM00226 29 178 5.0E-52 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I syc1055_d 8de6b77ef44cd713d039cf180eaa6fa9 189 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 31 176 6.4E-42 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I syc1055_d 8de6b77ef44cd713d039cf180eaa6fa9 189 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 31 48 2.3E-23 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 syc1055_d 8de6b77ef44cd713d039cf180eaa6fa9 189 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 74 90 2.3E-23 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 syc1055_d 8de6b77ef44cd713d039cf180eaa6fa9 189 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 150 165 2.3E-23 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 syc1055_d 8de6b77ef44cd713d039cf180eaa6fa9 189 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 107 122 2.3E-23 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 syc1055_d 8de6b77ef44cd713d039cf180eaa6fa9 189 Gene3D G3DSA:3.40.50.2300 24 188 1.3E-57 T 11-10-2018 syc1055_d 8de6b77ef44cd713d039cf180eaa6fa9 189 SUPERFAMILY SSF52788 26 179 2.49E-51 T 11-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily syc0047_c 9aa5ee3ad85cb4a8432d95bea71fe0f7 285 Pfam PF06485 Protein of unknown function (DUF1092) 5 280 1.8E-100 T 11-10-2018 IPR009472 Tab2-like GO:0003723 syc0370_c eb04aac5912c3561c0ad06a0032ecc1e 133 Gene3D G3DSA:1.20.58.1610 10 133 1.2E-43 T 11-10-2018 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc0370_c eb04aac5912c3561c0ad06a0032ecc1e 133 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 36 132 1.3E-37 T 11-10-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc0370_c eb04aac5912c3561c0ad06a0032ecc1e 133 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 16 133 20.465 T 11-10-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 syc0814_c faabffd324bfa1e0e0a0d64d095484a7 347 SUPERFAMILY SSF56349 177 337 1.12E-17 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 syc0814_c faabffd324bfa1e0e0a0d64d095484a7 347 Gene3D G3DSA:1.10.443.10 174 343 2.6E-11 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 syc0814_c faabffd324bfa1e0e0a0d64d095484a7 347 Pfam PF00589 Phage integrase family 280 330 2.3E-5 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 syc0368_c 7e2a6c67701e184e1c1b2270435e2932 172 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 125 146 - T 11-10-2018 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc0368_c 7e2a6c67701e184e1c1b2270435e2932 172 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 98 153 2.0E-27 T 11-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc0368_c 7e2a6c67701e184e1c1b2270435e2932 172 SUPERFAMILY SSF143243 19 168 1.31E-48 T 11-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc0368_c 7e2a6c67701e184e1c1b2270435e2932 172 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 43 161 9.7E-37 T 11-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc0368_c 7e2a6c67701e184e1c1b2270435e2932 172 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 15 172 27.312 T 11-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc0368_c 7e2a6c67701e184e1c1b2270435e2932 172 Gene3D G3DSA:3.30.460.80 20 144 2.8E-30 T 11-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc1921_c 57c6a59009359357e6336f76c30ed34f 209 SMART SM00419 148 197 1.7E-13 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 syc1921_c 57c6a59009359357e6336f76c30ed34f 209 SUPERFAMILY SSF46785 127 202 1.36E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily syc1921_c 57c6a59009359357e6336f76c30ed34f 209 SUPERFAMILY SSF51206 39 99 2.33E-7 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like syc1921_c 57c6a59009359357e6336f76c30ed34f 209 Pfam PF13545 Crp-like helix-turn-helix domain 130 201 7.2E-12 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 syc1921_c 57c6a59009359357e6336f76c30ed34f 209 Gene3D G3DSA:1.10.10.10 112 203 1.4E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily syc0277_d dc16c12fa4f7e6a5900b00ef503d4e7f 387 Pfam PF04087 Domain of unknown function (DUF389) 63 199 3.0E-30 T 11-10-2018 IPR005240 Protein of unknown function DUF389 syc1832_d 2989cdbe0cffcda76b6bab34806f1e54 342 SUPERFAMILY SSF53850 16 340 1.21E-44 T 11-10-2018 syc1832_d 2989cdbe0cffcda76b6bab34806f1e54 342 Gene3D G3DSA:3.40.190.10 128 337 8.2E-50 T 11-10-2018 syc1832_d 2989cdbe0cffcda76b6bab34806f1e54 342 Gene3D G3DSA:3.40.190.10 25 309 8.2E-50 T 11-10-2018 syc1832_d 2989cdbe0cffcda76b6bab34806f1e54 342 Pfam PF13343 Bacterial extracellular solute-binding protein 64 300 2.1E-28 T 11-10-2018 syc0928_d 21d5ceada46bc037d42fd4d4e04e3327 116 Pfam PF10989 Protein of unknown function (DUF2808) 1 106 1.9E-32 T 11-10-2018 IPR021256 Protein of unknown function DUF2808 syc2089_d 246c2628e5861e6d3195c5e7fe7afb17 228 Gene3D G3DSA:1.20.120.20 91 213 9.0E-7 T 11-10-2018 syc2089_d 246c2628e5861e6d3195c5e7fe7afb17 228 SUPERFAMILY SSF47162 97 201 5.89E-5 T 11-10-2018 syc1092_d 50fcaba59fafe236a3e119728bb53e24 125 Pfam PF05542 Protein of unknown function (DUF760) 20 101 2.0E-27 T 11-10-2018 IPR008479 Protein of unknown function DUF760 syc2293_c 0ae7803861037ce16f7a6666bd5909a1 149 Gene3D G3DSA:1.20.120.1490 30 138 1.1E-18 T 11-10-2018 syc2293_c 0ae7803861037ce16f7a6666bd5909a1 149 Pfam PF07813 LTXXQ motif family protein 40 131 3.0E-11 T 11-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 syc1191_d 5772d06df0352e57ca71d430f3c8c25a 456 Pfam PF05140 ResB-like family 358 436 1.2E-13 T 11-10-2018 IPR007816 ResB-like domain syc1191_d 5772d06df0352e57ca71d430f3c8c25a 456 Pfam PF05140 ResB-like family 29 300 2.2E-69 T 11-10-2018 IPR007816 ResB-like domain syc1191_d 5772d06df0352e57ca71d430f3c8c25a 456 Hamap MF_01392 Cytochrome c biogenesis protein Ccs1 [ccs1]. 19 441 45.005 T 11-10-2018 IPR023494 Cytochrome c biogenesis protein Ccs1/CcsB syc0317_d 1eaa7cfacef940725d5deac1920d2b59 227 SUPERFAMILY SSF81324 133 221 7.2E-14 T 11-10-2018 syc0317_d 1eaa7cfacef940725d5deac1920d2b59 227 Gene3D G3DSA:1.10.287.70 129 226 9.9E-15 T 11-10-2018 syc0317_d 1eaa7cfacef940725d5deac1920d2b59 227 Pfam PF07885 Ion channel 170 218 4.5E-10 T 11-10-2018 IPR013099 Potassium channel domain syc0388_c 08037fed3765e963e92c74ae6500b0f3 151 Pfam PF04657 Putative inner membrane exporter, YdcZ 7 144 3.3E-34 T 11-10-2018 IPR006750 Putative inner membrane exporter, YdcZ syc1439_d b1e5fc6a9d578dfcfdcc1653282a348a 146 Gene3D G3DSA:3.90.190.10 1 146 5.1E-21 T 11-10-2018 IPR029021 Protein-tyrosine phosphatase-like syc1439_d b1e5fc6a9d578dfcfdcc1653282a348a 146 Pfam PF00782 Dual specificity phosphatase, catalytic domain 64 139 5.2E-11 T 11-10-2018 IPR000340 Dual specificity phosphatase, catalytic domain GO:0008138|GO:0016311 syc1439_d b1e5fc6a9d578dfcfdcc1653282a348a 146 SMART SM00195 2 141 0.0078 T 11-10-2018 IPR020422 Dual specificity protein phosphatase domain GO:0006470|GO:0008138 syc1439_d b1e5fc6a9d578dfcfdcc1653282a348a 146 SUPERFAMILY SSF52799 2 141 2.04E-23 T 11-10-2018 IPR029021 Protein-tyrosine phosphatase-like syc0363_c e8fe0d7b57170477847d638346154a5d 391 Pfam PF04339 Peptidogalycan biosysnthesis/recognition 14 384 3.5E-138 T 11-10-2018 IPR007434 Peptidogalycan biosysnthesis/recognition syc0363_c e8fe0d7b57170477847d638346154a5d 391 SUPERFAMILY SSF55729 182 359 5.3E-35 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase syc1906_d 1addf1af7b603fb1bcbbc15ca442ceb3 243 Pfam PF01925 Sulfite exporter TauE/SafE 13 230 2.8E-13 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 syc1991_c c5c79a0c40fecb74b1e87e6626af1ed9 79 SUPERFAMILY SSF54292 1 71 1.97E-14 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 syc1991_c c5c79a0c40fecb74b1e87e6626af1ed9 79 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 10 51 1.2E-6 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 syc1991_c c5c79a0c40fecb74b1e87e6626af1ed9 79 Gene3D G3DSA:3.10.20.30 1 77 4.5E-10 T 11-10-2018 IPR012675 Beta-grasp domain superfamily syc2007_d e360da75cf329a0c13e28afd28d49a29 66 Pfam PF11061 Protein of unknown function (DUF2862) 3 63 1.0E-28 T 11-10-2018 IPR021291 Protein of unknown function DUF2862 syc0055_d 1125ef6648145ee8c7cfa1b8cb8486a5 264 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 1 245 2.9E-42 T 11-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 syc0055_d 1125ef6648145ee8c7cfa1b8cb8486a5 264 Gene3D G3DSA:3.10.310.10 118 253 3.2E-93 T 11-10-2018 syc0055_d 1125ef6648145ee8c7cfa1b8cb8486a5 264 PIRSF PIRSF016184 1 264 2.9E-60 T 11-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 syc0055_d 1125ef6648145ee8c7cfa1b8cb8486a5 264 SUPERFAMILY SSF54506 1 263 2.36E-80 T 11-10-2018 syc0055_d 1125ef6648145ee8c7cfa1b8cb8486a5 264 Pfam PF02567 Phenazine biosynthesis-like protein 8 261 1.2E-67 T 11-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 syc0055_d 1125ef6648145ee8c7cfa1b8cb8486a5 264 Gene3D G3DSA:3.10.310.10 6 257 3.2E-93 T 11-10-2018 syc2435_c a0261e9773c946896c1a0945c265aea6 248 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 68 233 4.4E-58 T 11-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 syc2435_c a0261e9773c946896c1a0945c265aea6 248 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 65 239 2.4E-63 T 11-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 syc1051_d a5d73aa0c1aa3353785c17761ff8f2c4 277 SUPERFAMILY SSF55486 97 266 2.03E-22 T 11-10-2018 syc1051_d a5d73aa0c1aa3353785c17761ff8f2c4 277 Gene3D G3DSA:3.40.390.10 103 265 5.7E-15 T 11-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 syc1051_d a5d73aa0c1aa3353785c17761ff8f2c4 277 Pfam PF00413 Matrixin 136 258 3.6E-7 T 11-10-2018 IPR001818 Peptidase M10, metallopeptidase GO:0004222|GO:0006508|GO:0008270|GO:0031012 syc1051_d a5d73aa0c1aa3353785c17761ff8f2c4 277 SMART SM00235 99 260 0.0018 T 11-10-2018 IPR006026 Peptidase, metallopeptidase GO:0006508|GO:0008237|GO:0008270 syc1050_d 3c6e553444346169a1b25193957fd994 79 Pfam PF03840 Preprotein translocase SecG subunit 5 70 4.5E-18 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 syc1050_d 3c6e553444346169a1b25193957fd994 79 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 72 1.4E-20 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 syc2052_c 163db8f3e02e4a67e389d6a7402cbf24 134 Pfam PF03023 MviN-like protein 2 85 8.0E-8 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ syc1624_d 4359b665a7454b075224db53546e1f0e 300 SMART SM00702 107 296 2.8E-15 T 11-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 syc1624_d 4359b665a7454b075224db53546e1f0e 300 Gene3D G3DSA:2.60.120.620 97 298 7.1E-26 T 11-10-2018 syc1624_d 4359b665a7454b075224db53546e1f0e 300 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 190 296 5.2E-17 T 11-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 syc2077_c 8b4e91f55f2c9fda77c1a9b19719d272 81 Pfam PF11998 Protein of unknown function (DUF3493) 6 77 1.8E-27 T 11-10-2018 IPR021883 Protein LOW PSII ACCUMULATION 1-like syc2099_d ea4702550cd353aad7482d032040f987 72 Pfam PF00504 Chlorophyll A-B binding protein 26 56 2.0E-4 T 11-10-2018 IPR022796 Chlorophyll A-B binding protein syc2099_d ea4702550cd353aad7482d032040f987 72 SUPERFAMILY SSF103511 26 69 2.22E-11 T 11-10-2018 syc0272_d dd289b473e71137d03a0fe3559be76ef 230 SUPERFAMILY SSF160246 101 157 5.49E-5 T 11-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily syc1842_d 63cbf996ab327a2dd6d16d681f15c98f 184 Pfam PF07176 Alpha/beta hydrolase of unknown function (DUF1400) 40 161 5.7E-31 T 11-10-2018 IPR010802 Domain of unknown function DUF1400 syc2511_d 0811191e5b5561c2e1160ff7d4c242cb 225 Pfam PF00679 Elongation factor G C-terminus 26 107 9.4E-21 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like syc2511_d 0811191e5b5561c2e1160ff7d4c242cb 225 Gene3D G3DSA:2.40.50.250 110 200 5.9E-35 T 11-10-2018 syc2511_d 0811191e5b5561c2e1160ff7d4c242cb 225 SUPERFAMILY SSF54980 26 140 1.2E-26 T 11-10-2018 IPR035647 EF-G domain III/V-like syc2511_d 0811191e5b5561c2e1160ff7d4c242cb 225 Gene3D G3DSA:3.30.70.240 17 108 2.2E-32 T 11-10-2018 syc0783_c b16ac01a64743187a39e65e2f6061e21 167 TIGRFAM TIGR01611 tail_tube: phage major tail tube protein 1 166 1.5E-51 T 11-10-2018 IPR006498 Tail tube protein syc0783_c b16ac01a64743187a39e65e2f6061e21 167 Pfam PF04985 Phage tail tube protein FII 3 166 4.3E-58 T 11-10-2018 IPR006498 Tail tube protein syc0749_d 1318f4140c526ebaebea6a116534527f 264 SUPERFAMILY SSF47616 75 206 5.01E-10 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily syc0749_d 1318f4140c526ebaebea6a116534527f 264 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 78 3.8E-20 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 syc0749_d 1318f4140c526ebaebea6a116534527f 264 Gene3D G3DSA:1.20.1050.10 134 212 7.8E-6 T 11-10-2018 syc0749_d 1318f4140c526ebaebea6a116534527f 264 SUPERFAMILY SSF52833 1 101 2.76E-24 T 11-10-2018 IPR036249 Thioredoxin-like superfamily syc0749_d 1318f4140c526ebaebea6a116534527f 264 Gene3D G3DSA:3.40.30.10 1 101 4.1E-23 T 11-10-2018 syc1864_c 7651896f354555dfee90dce017d5d9d3 158 Hamap MF_01353 NAD(P)H-quinone oxidoreductase subunit N [ndhN]. 1 156 41.256 T 11-10-2018 IPR020874 NAD(P)H-quinone oxidoreductase, subunit N GO:0016020|GO:0016655|GO:0055114 syc1864_c 7651896f354555dfee90dce017d5d9d3 158 Pfam PF11909 NADH-quinone oxidoreductase cyanobacterial subunit N 1 152 3.9E-73 T 11-10-2018 IPR020874 NAD(P)H-quinone oxidoreductase, subunit N GO:0016020|GO:0016655|GO:0055114 syc1800_c 50c491c404d9dbcc82fc84764a8346c6 164 Pfam PF11947 Protein of unknown function (DUF3464) 7 154 4.0E-55 T 11-10-2018 IPR021855 PAM68-like syc0223_c 4676eb1a05fbe775cd37217944f6568c 58 SUPERFAMILY SSF103511 10 56 6.41E-12 T 11-10-2018 syc0223_c 4676eb1a05fbe775cd37217944f6568c 58 Pfam PF00504 Chlorophyll A-B binding protein 16 47 2.6E-6 T 11-10-2018 IPR022796 Chlorophyll A-B binding protein syc0987_d ef5cc1de9b0841dba66a794ee0f8d152 641 Gene3D G3DSA:3.40.50.10490 480 626 6.9E-127 T 11-10-2018 syc0987_d ef5cc1de9b0841dba66a794ee0f8d152 641 Gene3D G3DSA:3.60.20.10 2 246 1.0E-71 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal syc0987_d ef5cc1de9b0841dba66a794ee0f8d152 641 SUPERFAMILY SSF53697 254 641 1.84E-92 T 11-10-2018 syc0987_d ef5cc1de9b0841dba66a794ee0f8d152 641 Pfam PF13522 Glutamine amidotransferase domain 66 201 1.8E-17 T 11-10-2018 syc0987_d ef5cc1de9b0841dba66a794ee0f8d152 641 Gene3D G3DSA:3.40.50.10490 258 640 6.9E-127 T 11-10-2018 syc0987_d ef5cc1de9b0841dba66a794ee0f8d152 641 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 641 2.1E-232 T 11-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 syc0987_d ef5cc1de9b0841dba66a794ee0f8d152 641 SUPERFAMILY SSF56235 2 243 1.8E-66 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal syc0987_d ef5cc1de9b0841dba66a794ee0f8d152 641 Pfam PF01380 SIS domain 315 448 1.0E-15 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 syc0987_d ef5cc1de9b0841dba66a794ee0f8d152 641 Pfam PF01380 SIS domain 501 623 1.3E-21 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 syc0987_d ef5cc1de9b0841dba66a794ee0f8d152 641 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 641 38.65 T 11-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 syc2411_c b9f58ece24be04326bebc6106e1f8e3d 112 Gene3D G3DSA:2.40.30.220 2 112 1.4E-47 T 11-10-2018 IPR038676 Photosystem II Psb28, class 1 superfamily syc2411_c b9f58ece24be04326bebc6106e1f8e3d 112 TIGRFAM TIGR03047 PS_II_psb28: photosystem II reaction center protein Psb28 5 110 6.3E-49 T 11-10-2018 IPR005610 Photosystem II Psb28, class 1 GO:0009523|GO:0009654|GO:0015979|GO:0016020 syc2411_c b9f58ece24be04326bebc6106e1f8e3d 112 Pfam PF03912 Psb28 protein 5 109 4.7E-46 T 11-10-2018 IPR005610 Photosystem II Psb28, class 1 GO:0009523|GO:0009654|GO:0015979|GO:0016020 syc2411_c b9f58ece24be04326bebc6106e1f8e3d 112 Hamap MF_01370 Photosystem II reaction center Psb28 protein [psb28]. 2 110 35.005 T 11-10-2018 IPR005610 Photosystem II Psb28, class 1 GO:0009523|GO:0009654|GO:0015979|GO:0016020 syc2411_c b9f58ece24be04326bebc6106e1f8e3d 112 ProDom PD012692 PHOTOSYSTEM II REACTION W CENTER PSB28 CHLOROPLAST PHOTOSYNTHESIS PLASTID CENTRE 3 104 1.0E-54 T 11-10-2018 IPR005610 Photosystem II Psb28, class 1 GO:0009523|GO:0009654|GO:0015979|GO:0016020 syc0579_d 4105c0d956e5ef17892794d0e70771e2 126 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 5 87 3.1E-21 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 syc0579_d 4105c0d956e5ef17892794d0e70771e2 126 Gene3D G3DSA:1.10.10.10 2 110 1.1E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily syc0579_d 4105c0d956e5ef17892794d0e70771e2 126 SUPERFAMILY SSF46767 4 88 5.62E-20 T 11-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 syc1682_d 53e71cf5b715756ffe25ff7ebe606529 268 Pfam PF06161 Protein of unknown function (DUF975) 34 219 1.7E-9 T 11-10-2018 IPR010380 Protein of unknown function DUF975 syc1910_c 7687eab82de668db865428aac27cb687 545 Gene3D G3DSA:1.20.1530.20 1 398 2.3E-25 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily syc1910_c 7687eab82de668db865428aac27cb687 545 Pfam PF00582 Universal stress protein family 419 536 4.9E-14 T 11-10-2018 IPR006016 UspA syc1910_c 7687eab82de668db865428aac27cb687 545 Pfam PF00999 Sodium/hydrogen exchanger family 12 389 5.1E-30 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 syc1910_c 7687eab82de668db865428aac27cb687 545 Gene3D G3DSA:3.40.50.620 418 540 1.3E-16 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold syc1910_c 7687eab82de668db865428aac27cb687 545 SUPERFAMILY SSF52402 419 536 1.0E-18 T 11-10-2018 syc0448_c 928cde6fea174ce0acc79c54f2b555b8 385 Pfam PF13365 Trypsin-like peptidase domain 105 242 6.4E-37 T 11-10-2018 syc0448_c 928cde6fea174ce0acc79c54f2b555b8 385 Pfam PF13180 PDZ domain 278 377 2.7E-18 T 11-10-2018 IPR001478 PDZ domain GO:0005515 syc0448_c 928cde6fea174ce0acc79c54f2b555b8 385 Gene3D G3DSA:2.40.10.120 53 274 3.2E-77 T 11-10-2018 syc0448_c 928cde6fea174ce0acc79c54f2b555b8 385 PRINTS PR00834 HtrA/DegQ protease family signature 114 126 9.7E-48 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 syc0448_c 928cde6fea174ce0acc79c54f2b555b8 385 PRINTS PR00834 HtrA/DegQ protease family signature 135 155 9.7E-48 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 syc0448_c 928cde6fea174ce0acc79c54f2b555b8 385 PRINTS PR00834 HtrA/DegQ protease family signature 326 338 9.7E-48 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 syc0448_c 928cde6fea174ce0acc79c54f2b555b8 385 PRINTS PR00834 HtrA/DegQ protease family signature 175 199 9.7E-48 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 syc0448_c 928cde6fea174ce0acc79c54f2b555b8 385 PRINTS PR00834 HtrA/DegQ protease family signature 213 230 9.7E-48 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 syc0448_c 928cde6fea174ce0acc79c54f2b555b8 385 PRINTS PR00834 HtrA/DegQ protease family signature 235 252 9.7E-48 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 syc0448_c 928cde6fea174ce0acc79c54f2b555b8 385 SUPERFAMILY SSF50494 62 270 2.84E-64 T 11-10-2018 IPR009003 Peptidase S1, PA clan syc0448_c 928cde6fea174ce0acc79c54f2b555b8 385 SUPERFAMILY SSF50156 259 377 8.02E-23 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 syc0448_c 928cde6fea174ce0acc79c54f2b555b8 385 Gene3D G3DSA:2.30.42.10 275 384 9.1E-33 T 11-10-2018 syc0448_c 928cde6fea174ce0acc79c54f2b555b8 385 SMART SM00228 278 368 4.1E-13 T 11-10-2018 IPR001478 PDZ domain GO:0005515 syc1480_d a0d625dd3d38ba853cb2b8331b3bed61 187 Pfam PF01081 KDPG and KHG aldolase 9 185 2.9E-40 T 11-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 syc1480_d a0d625dd3d38ba853cb2b8331b3bed61 187 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 125 138 - T 11-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 syc1480_d a0d625dd3d38ba853cb2b8331b3bed61 187 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 8 186 1.2E-49 T 11-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 syc1480_d a0d625dd3d38ba853cb2b8331b3bed61 187 Gene3D G3DSA:3.20.20.70 2 187 2.2E-61 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 syc1480_d a0d625dd3d38ba853cb2b8331b3bed61 187 SUPERFAMILY SSF51569 4 186 1.74E-54 T 11-10-2018 syc2447_c 9b1b8d7ad58a406bc71afd41c4f771d0 88 Hamap MF_01360 UPF0367 protein . 1 87 27.671 T 11-10-2018 IPR020885 Uncharacterised protein family UPF0367 syc0007_d bd29102db6b9704adb283fa24161a165 186 Gene3D G3DSA:2.10.109.10 72 185 1.3E-48 T 11-10-2018 syc0007_d bd29102db6b9704adb283fa24161a165 186 Pfam PF00717 Peptidase S24-like 102 169 1.7E-16 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C syc0007_d bd29102db6b9704adb283fa24161a165 186 SUPERFAMILY SSF51306 61 184 4.53E-39 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily syc0007_d bd29102db6b9704adb283fa24161a165 186 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 138 150 1.3E-9 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 syc0007_d bd29102db6b9704adb283fa24161a165 186 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 110 121 1.3E-9 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 syc0007_d bd29102db6b9704adb283fa24161a165 186 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 99 109 1.3E-9 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 syc0188_c d65cd8a7fb79dbbb36bd2e99c6d8af73 455 PRINTS PR00385 P450 superfamily signature 260 277 2.3E-13 T 11-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 syc0188_c d65cd8a7fb79dbbb36bd2e99c6d8af73 455 PRINTS PR00385 P450 superfamily signature 308 319 2.3E-13 T 11-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 syc0188_c d65cd8a7fb79dbbb36bd2e99c6d8af73 455 PRINTS PR00385 P450 superfamily signature 381 390 2.3E-13 T 11-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 syc0188_c d65cd8a7fb79dbbb36bd2e99c6d8af73 455 PRINTS PR00385 P450 superfamily signature 390 401 2.3E-13 T 11-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 syc0188_c d65cd8a7fb79dbbb36bd2e99c6d8af73 455 Pfam PF00067 Cytochrome P450 3 426 1.4E-70 T 11-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 syc0188_c d65cd8a7fb79dbbb36bd2e99c6d8af73 455 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 383 392 - T 11-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 syc0188_c d65cd8a7fb79dbbb36bd2e99c6d8af73 455 PRINTS PR00463 E-class P450 group I signature 29 48 1.2E-23 T 11-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 syc0188_c d65cd8a7fb79dbbb36bd2e99c6d8af73 455 PRINTS PR00463 E-class P450 group I signature 380 390 1.2E-23 T 11-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 syc0188_c d65cd8a7fb79dbbb36bd2e99c6d8af73 455 PRINTS PR00463 E-class P450 group I signature 249 266 1.2E-23 T 11-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 syc0188_c d65cd8a7fb79dbbb36bd2e99c6d8af73 455 PRINTS PR00463 E-class P450 group I signature 307 325 1.2E-23 T 11-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 syc0188_c d65cd8a7fb79dbbb36bd2e99c6d8af73 455 PRINTS PR00463 E-class P450 group I signature 348 372 1.2E-23 T 11-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 syc0188_c d65cd8a7fb79dbbb36bd2e99c6d8af73 455 PRINTS PR00463 E-class P450 group I signature 390 413 1.2E-23 T 11-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 syc0188_c d65cd8a7fb79dbbb36bd2e99c6d8af73 455 PRINTS PR00463 E-class P450 group I signature 269 295 1.2E-23 T 11-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 syc0188_c d65cd8a7fb79dbbb36bd2e99c6d8af73 455 Gene3D G3DSA:1.10.630.10 6 446 1.3E-104 T 11-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 syc0188_c d65cd8a7fb79dbbb36bd2e99c6d8af73 455 SUPERFAMILY SSF48264 2 440 9.43E-96 T 11-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 syc0930_d f4d923b4c499844d3ec25974ad6c5f0e 135 Pfam PF13026 Protein of unknown function (DUF3887) 36 124 2.0E-7 T 11-10-2018 IPR024981 Domain of unknown function DUF3887 KEGG: 00983+3.1.1.1|MetaCyc: PWY-6303|MetaCyc: PWY-6857 syc1711_d e24beca1fcbe87daf57014ac5bc5a1a2 593 Gene3D G3DSA:1.20.1530.20 5 393 3.8E-20 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily syc1711_d e24beca1fcbe87daf57014ac5bc5a1a2 593 Pfam PF00999 Sodium/hydrogen exchanger family 10 391 1.5E-45 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 syc2518_d 8c30a8946c5eda83f847a327705ddfef 221 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 28 209 3.2E-20 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 syc2518_d 8c30a8946c5eda83f847a327705ddfef 221 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 12 218 8.4E-69 T 11-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 syc2518_d 8c30a8946c5eda83f847a327705ddfef 221 Gene3D G3DSA:1.10.3720.10 2 219 5.4E-50 T 11-10-2018 IPR035906 MetI-like superfamily syc2518_d 8c30a8946c5eda83f847a327705ddfef 221 SUPERFAMILY SSF161098 7 211 1.96E-46 T 11-10-2018 IPR035906 MetI-like superfamily syc2273_c f7591cabe06ae28ab43da800ee4d35c7 119 SUPERFAMILY SSF48452 59 116 3.23E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc2273_c f7591cabe06ae28ab43da800ee4d35c7 119 Gene3D G3DSA:1.25.40.10 54 119 7.5E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 syc2273_c f7591cabe06ae28ab43da800ee4d35c7 119 Pfam PF14559 Tetratricopeptide repeat 62 116 4.0E-6 T 11-10-2018 syc1830_d a4aef69d6ca20a4ff5a9cfa3ec90d31a 245 Pfam PF09991 Predicted membrane protein (DUF2232) 55 233 3.1E-15 T 11-10-2018 IPR018710 Protein of unknown function DUF2232 syc1084_c b46b131401f7f9eeb1693612a0ab5abf 402 Gene3D G3DSA:1.10.443.30 202 375 2.5E-9 T 11-10-2018 IPR038280 ResT superfamily syc2480_c 64ced081a07ccff65a4f072481df5f77 237 Pfam PF11353 Protein of unknown function (DUF3153) 26 232 2.4E-57 T 11-10-2018 IPR021499 Protein of unknown function DUF3153 syc1256_d 8516c57a42ea3119b85a3fc8f16604e8 249 Pfam PF01940 Integral membrane protein DUF92 21 239 9.3E-51 T 11-10-2018 IPR002794 Protein of unknown function DUF92, TMEM19 GO:0016021 syc1256_d 8516c57a42ea3119b85a3fc8f16604e8 249 TIGRFAM TIGR00297 TIGR00297: TIGR00297 family protein 11 246 3.3E-66 T 11-10-2018 IPR002794 Protein of unknown function DUF92, TMEM19 GO:0016021 syc2173_c 71f7bbdac9c6bf10189113f620a8775f 150 Gene3D G3DSA:3.10.490.10 10 140 1.4E-20 T 11-10-2018 syc2173_c 71f7bbdac9c6bf10189113f620a8775f 150 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 12 138 2.5E-18 T 11-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like syc2173_c 71f7bbdac9c6bf10189113f620a8775f 150 SUPERFAMILY SSF110857 11 140 3.14E-24 T 11-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily syc2392_c 26dc7026a107ee817b95ffa0b7d207fe 113 Gene3D G3DSA:1.10.10.10 9 112 2.1E-43 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily syc2392_c 26dc7026a107ee817b95ffa0b7d207fe 113 Pfam PF01638 HxlR-like helix-turn-helix 24 108 6.9E-33 T 11-10-2018 IPR002577 Helix-turn-helix, HxlR type syc2392_c 26dc7026a107ee817b95ffa0b7d207fe 113 SUPERFAMILY SSF46785 11 108 5.66E-36 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily syc0711_d 9dc07eb0561bb8a57d9408496d6f8da7 122 Pfam PF09996 Uncharacterized protein conserved in bacteria (DUF2237) 5 119 9.8E-55 T 11-10-2018 IPR018714 Protein of unknown function DUF2237 syc0711_d 9dc07eb0561bb8a57d9408496d6f8da7 122 Gene3D G3DSA:3.30.56.110 2 122 1.4E-55 T 11-10-2018 syc0728_c d7de043548148943cc2767bb3eabf7c0 527 Pfam PF00999 Sodium/hydrogen exchanger family 23 401 5.9E-69 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 syc1899_c 081d1a53f095ec989040a8ee000bf840 376 Pfam PF09376 NurA domain 88 339 1.4E-36 T 11-10-2018 IPR018977 NurA domain syc1899_c 081d1a53f095ec989040a8ee000bf840 376 SMART SM00933 87 340 7.1E-43 T 11-10-2018 IPR018977 NurA domain syc0400_d 21a18a7b6cb5c00c64ddee2c5cd374cf 218 Pfam PF03713 Domain of unknown function (DUF305) 58 212 3.8E-44 T 11-10-2018 IPR005183 Domain of unknown function DUF305 syc0400_d 21a18a7b6cb5c00c64ddee2c5cd374cf 218 Gene3D G3DSA:1.20.1260.10 56 218 1.7E-51 T 11-10-2018 IPR012347 Ferritin-like syc1895_c b3c7f8b06d40032b9d5580e605d1fb1e 165 Pfam PF14279 HNH endonuclease 79 131 7.3E-16 T 11-10-2018 IPR029471 HNH endonuclease 5 syc1895_c b3c7f8b06d40032b9d5580e605d1fb1e 165 Gene3D G3DSA:3.30.40.60 56 149 4.0E-22 T 11-10-2018 syc1895_c b3c7f8b06d40032b9d5580e605d1fb1e 165 SMART SM00507 66 117 7.5E-14 T 11-10-2018 IPR003615 HNH nuclease syc0503_d 42a64fe3657c34f4c4e68196565acecb 523 TIGRFAM TIGR02669 SpoIID_LytB: SpoIID/LytB domain 215 508 9.9E-85 T 11-10-2018 IPR013486 Sporulation stage II protein D, amidase enhancer LytB GO:0030435 syc0503_d 42a64fe3657c34f4c4e68196565acecb 523 Pfam PF08486 Stage II sporulation protein 211 300 3.2E-24 T 11-10-2018 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal syc2015_d 5ce40ce24310c11c71a43ffc7b9b4a94 212 SMART SM00855 4 158 1.0E-21 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 syc2015_d 5ce40ce24310c11c71a43ffc7b9b4a94 212 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 198 4.7E-61 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 syc2015_d 5ce40ce24310c11c71a43ffc7b9b4a94 212 PIRSF PIRSF000709 3 195 6.8E-17 T 11-10-2018 syc2015_d 5ce40ce24310c11c71a43ffc7b9b4a94 212 SUPERFAMILY SSF53254 1 206 1.62E-58 T 11-10-2018 IPR029033 Histidine phosphatase superfamily syc2015_d 5ce40ce24310c11c71a43ffc7b9b4a94 212 Gene3D G3DSA:3.40.50.1240 2 209 7.3E-58 T 11-10-2018 IPR029033 Histidine phosphatase superfamily syc1512_d fac3e63c598de06f4598d277698958f1 358 SUPERFAMILY SSF53756 13 289 1.45E-10 T 11-10-2018 syc2308_d 86598b944f4f921c34e87a08fe45786b 140 Pfam PF14229 Domain of unknown function (DUF4332) 16 135 3.4E-34 T 11-10-2018 IPR025567 Domain of unknown function DUF4332 KEGG: 00970+6.1.1.6 syc1582_c da0d2e35e2a96c35adfda2f8c36141e0 280 SUPERFAMILY SSF53474 15 273 3.91E-51 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold syc1582_c da0d2e35e2a96c35adfda2f8c36141e0 280 PRINTS PR00412 Epoxide hydrolase signature 216 232 5.2E-6 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 syc1582_c da0d2e35e2a96c35adfda2f8c36141e0 280 PRINTS PR00412 Epoxide hydrolase signature 109 122 5.2E-6 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 syc1582_c da0d2e35e2a96c35adfda2f8c36141e0 280 PRINTS PR00412 Epoxide hydrolase signature 30 48 5.2E-6 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 syc1582_c da0d2e35e2a96c35adfda2f8c36141e0 280 PRINTS PR00412 Epoxide hydrolase signature 249 271 5.2E-6 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 syc1582_c da0d2e35e2a96c35adfda2f8c36141e0 280 PRINTS PR00412 Epoxide hydrolase signature 95 108 5.2E-6 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 syc1582_c da0d2e35e2a96c35adfda2f8c36141e0 280 Gene3D G3DSA:3.40.50.1820 8 274 7.4E-55 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold syc1582_c da0d2e35e2a96c35adfda2f8c36141e0 280 Pfam PF00561 alpha/beta hydrolase fold 25 261 5.0E-27 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 syc1582_c da0d2e35e2a96c35adfda2f8c36141e0 280 PRINTS PR00111 Alpha/beta hydrolase fold signature 218 232 7.5E-7 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 syc1582_c da0d2e35e2a96c35adfda2f8c36141e0 280 PRINTS PR00111 Alpha/beta hydrolase fold signature 109 122 7.5E-7 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 syc1582_c da0d2e35e2a96c35adfda2f8c36141e0 280 PRINTS PR00111 Alpha/beta hydrolase fold signature 95 108 7.5E-7 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 syc0374_d d7e66efac9309fa07f777af719250158 44 SUPERFAMILY SSF161045 11 44 1.44E-17 T 11-10-2018 syc0374_d d7e66efac9309fa07f777af719250158 44 Pfam PF00283 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits 6 34 1.7E-18 T 11-10-2018 IPR013081 Photosystem II cytochrome b559, N-terminal GO:0015979 syc0374_d d7e66efac9309fa07f777af719250158 44 TIGRFAM TIGR01333 cyt_b559_beta: cytochrome b559, beta subunit 4 44 1.0E-26 T 11-10-2018 IPR006241 Photosystem II cytochrome b559, beta subunit GO:0009523|GO:0009539|GO:0009767|GO:0015979|GO:0016021|GO:0019684|GO:0020037 syc0374_d d7e66efac9309fa07f777af719250158 44 ProSitePatterns PS00537 Cytochrome b559 subunits heme-binding site signature. 14 28 - T 11-10-2018 IPR006216 Photosystem II cytochrome b559, conserved site GO:0009523|GO:0009539|GO:0009767|GO:0015979|GO:0016021|GO:0019684|GO:0020037 syc0374_d d7e66efac9309fa07f777af719250158 44 Hamap MF_00643 Cytochrome b559 subunit beta [psbF]. 6 44 20.363 T 11-10-2018 IPR006241 Photosystem II cytochrome b559, beta subunit GO:0009523|GO:0009539|GO:0009767|GO:0015979|GO:0016021|GO:0019684|GO:0020037 syc0374_d d7e66efac9309fa07f777af719250158 44 PIRSF PIRSF000037 1 44 2.8E-30 T 11-10-2018 IPR006241 Photosystem II cytochrome b559, beta subunit GO:0009523|GO:0009539|GO:0009767|GO:0015979|GO:0016021|GO:0019684|GO:0020037 syc2175_d e5975adcfefae7cf7960af7eac8ffee8 253 Pfam PF13560 Helix-turn-helix domain 16 95 2.2E-7 T 11-10-2018 syc2175_d e5975adcfefae7cf7960af7eac8ffee8 253 SMART SM00530 20 94 1.3E-4 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 syc2175_d e5975adcfefae7cf7960af7eac8ffee8 253 SUPERFAMILY SSF47413 45 94 5.91E-5 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 syc1110_c 889229a13ea3bfe1275a2a5509018d61 133 Pfam PF13767 Domain of unknown function (DUF4168) 30 124 6.4E-21 T 11-10-2018 IPR025433 Domain of unknown function DUF4168 syc2409_c ec86680ddbf967ebeb12562e3d94d624 350 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 41 343 2.9E-75 T 11-10-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 syc2409_c ec86680ddbf967ebeb12562e3d94d624 350 SUPERFAMILY SSF53850 41 343 5.61E-74 T 11-10-2018 syc2409_c ec86680ddbf967ebeb12562e3d94d624 350 Pfam PF13531 Bacterial extracellular solute-binding protein 45 296 2.0E-46 T 11-10-2018 syc2409_c ec86680ddbf967ebeb12562e3d94d624 350 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 165 173 - T 11-10-2018 IPR034408 Sulphate/thiosulphate-binding site GO:1901681 syc2409_c ec86680ddbf967ebeb12562e3d94d624 350 Gene3D G3DSA:3.40.190.10 47 312 1.8E-121 T 11-10-2018 syc2409_c ec86680ddbf967ebeb12562e3d94d624 350 Gene3D G3DSA:3.40.190.10 134 342 1.8E-121 T 11-10-2018 syc0376_d a977dc6861788a17f11962fe76670960 39 Hamap MF_01305 Photosystem II reaction center protein J [psbJ]. 1 39 15.639 T 11-10-2018 IPR002682 Photosystem II PsbJ GO:0009523|GO:0009539|GO:0015979|GO:0016020 syc0376_d a977dc6861788a17f11962fe76670960 39 SUPERFAMILY SSF161021 6 39 5.75E-14 T 11-10-2018 IPR037267 Photosystem II PsbJ superfamily GO:0015979 syc0376_d a977dc6861788a17f11962fe76670960 39 Pfam PF01788 PsbJ 3 39 5.1E-21 T 11-10-2018 IPR002682 Photosystem II PsbJ GO:0009523|GO:0009539|GO:0015979|GO:0016020 syc0621_d b2f5eb9758f81c1765fb8a8be3184802 100 Pfam PF12159 Protein of unknown function (DUF3593) 4 88 3.4E-40 T 11-10-2018 IPR021995 Protein of unknown function DUF3593 syc1190_d 1a2b81eb30f4ca27b33c88990e0ee22b 252 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 43 245 6.3E-49 T 11-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 syc1524_c 664a9ca3fb5904d9c580630681ee0590 145 Pfam PF02656 Domain of unknown function (DUF202) 28 98 5.0E-17 T 11-10-2018 IPR003807 Domain of unknown function DUF202 syc0870_d 8e27fe680b8b88c08be87e448e81bdf8 70 Pfam PF10999 Protein of unknown function (DUF2839) 2 66 1.0E-27 T 11-10-2018 IPR021262 Protein of unknown function DUF2839 syc0706_c fdda1ef45531810f542917e78f24581b 219 Pfam PF07176 Alpha/beta hydrolase of unknown function (DUF1400) 27 148 4.1E-27 T 11-10-2018 IPR010802 Domain of unknown function DUF1400 syc1498_c 35d9b401e852dbf4267ea768f7e7e602 366 TIGRFAM TIGR00260 thrC: threonine synthase 22 338 6.7E-101 T 11-10-2018 IPR004450 Threonine synthase-like syc1498_c 35d9b401e852dbf4267ea768f7e7e602 366 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 38 332 1.3E-75 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme syc1498_c 35d9b401e852dbf4267ea768f7e7e602 366 Gene3D G3DSA:3.40.50.1100 76 172 2.4E-125 T 11-10-2018 syc1498_c 35d9b401e852dbf4267ea768f7e7e602 366 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 68 81 - T 11-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 syc1498_c 35d9b401e852dbf4267ea768f7e7e602 366 PIRSF PIRSF038945 5 364 2.7E-178 T 11-10-2018 IPR026260 Threonine synthase, bacterial/archaeal GO:0004795|GO:0009088 KEGG: 00260+4.2.3.1|KEGG: 00750+4.2.3.1 syc1498_c 35d9b401e852dbf4267ea768f7e7e602 366 SUPERFAMILY SSF53686 16 346 2.88E-107 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme syc1498_c 35d9b401e852dbf4267ea768f7e7e602 366 Gene3D G3DSA:3.40.50.1100 28 338 2.4E-125 T 11-10-2018 syc1278_c 2a5c6ac0ef63c1b6c3f64391c6e7dd0f 171 Pfam PF00027 Cyclic nucleotide-binding domain 4 89 7.0E-19 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain syc1278_c 2a5c6ac0ef63c1b6c3f64391c6e7dd0f 171 SUPERFAMILY SSF51206 1 108 3.27E-24 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like syc1278_c 2a5c6ac0ef63c1b6c3f64391c6e7dd0f 171 SMART SM00100 1 103 1.1E-8 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain syc1278_c 2a5c6ac0ef63c1b6c3f64391c6e7dd0f 171 Gene3D G3DSA:2.60.120.10 1 138 2.2E-25 T 11-10-2018 IPR014710 RmlC-like jelly roll fold syc1369_d 64b844ac0240ce07b74297d2c98733af 435 Pfam PF00589 Phage integrase family 305 368 4.9E-6 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 syc1369_d 64b844ac0240ce07b74297d2c98733af 435 SUPERFAMILY SSF56349 218 372 2.27E-19 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 syc1369_d 64b844ac0240ce07b74297d2c98733af 435 Gene3D G3DSA:1.10.443.10 218 394 2.1E-13 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 syc2133_c 1b1be02d13454af167f2d9c3d9100bb2 40 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 4 33 8.0E-4 T 11-10-2018 syc2133_c 1b1be02d13454af167f2d9c3d9100bb2 40 Hamap MF_00717 Photosystem II protein Y [psbY]. 2 36 15.136 T 11-10-2018 IPR009388 Photosystem II PsbY GO:0009523|GO:0015979|GO:0016021|GO:0030145 syc2133_c 1b1be02d13454af167f2d9c3d9100bb2 40 Pfam PF06298 Photosystem II protein Y (PsbY) 1 34 7.1E-20 T 11-10-2018 IPR009388 Photosystem II PsbY GO:0009523|GO:0015979|GO:0016021|GO:0030145 syc0217_c 07805567bc1e592441e0f9f56d847609 54 Pfam PF16261 Domain of unknown function (DUF4915) 1 37 8.1E-11 T 11-10-2018 IPR017481 Conserved hypothetical protein CHP03032 syc2439_c 345822279d904430a75cf74fa2712337 306 Pfam PF12146 Serine aminopeptidase, S33 58 126 7.6E-7 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 syc2439_c 345822279d904430a75cf74fa2712337 306 SUPERFAMILY SSF53474 13 213 4.77E-21 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold syc2439_c 345822279d904430a75cf74fa2712337 306 Gene3D G3DSA:3.40.50.1820 14 221 4.5E-21 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold syc1857_c 625e65a76591d7a9c04ee9f8c9684fc4 290 Pfam PF14257 Domain of unknown function (DUF4349) 22 267 3.0E-58 T 11-10-2018 IPR025645 Domain of unknown function DUF4349 syc1971_d a13d0e0454f0cf19f4103f39660c689d 130 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 19 121 1.0E-19 T 11-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 syc1971_d a13d0e0454f0cf19f4103f39660c689d 130 Gene3D G3DSA:3.30.750.24 14 128 2.9E-24 T 11-10-2018 IPR036513 STAS domain superfamily syc1971_d a13d0e0454f0cf19f4103f39660c689d 130 SUPERFAMILY SSF52091 22 125 1.88E-23 T 11-10-2018 IPR036513 STAS domain superfamily syc1971_d a13d0e0454f0cf19f4103f39660c689d 130 Pfam PF01740 STAS domain 23 121 2.0E-14 T 11-10-2018 IPR002645 STAS domain syc1311_d df6be78a0f8349e816749b69904abb6f 157 Pfam PF09990 Predicted membrane protein (DUF2231) 28 130 2.5E-29 T 11-10-2018 IPR019251 Domain of unknown function DUF2231, transmembrane syc1695_c 7eca3203647c95f962e3c1d93a188d5f 344 Gene3D G3DSA:3.20.20.140 5 336 6.5E-43 T 11-10-2018 syc1695_c 7eca3203647c95f962e3c1d93a188d5f 344 SUPERFAMILY SSF51556 5 320 4.54E-36 T 11-10-2018 IPR032466 Metal-dependent hydrolase syc1695_c 7eca3203647c95f962e3c1d93a188d5f 344 Pfam PF00962 Adenosine/AMP deaminase 5 312 9.6E-17 T 11-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 syc1966_d b636a7259bca6c9294c704fb21ece6fd 134 ProDom PD082852 PRECURSOR SIGNAL PROTEASE SIMILAR SERINE KINASE HYDROLASE ENDOPEPTIDASE GLU-SPECIFIC V8-LIKE 1 134 6.0E-73 T 11-10-2018 IPR020336 Uncharacterised protein family Y2126 syc0171_c 64ca9c028d7b9bd16ebbb1e054d35b16 228 Pfam PF03724 META domain 3 103 5.3E-22 T 11-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ syc0171_c 64ca9c028d7b9bd16ebbb1e054d35b16 228 Pfam PF03724 META domain 112 222 9.3E-31 T 11-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ syc0171_c 64ca9c028d7b9bd16ebbb1e054d35b16 228 Gene3D G3DSA:2.40.128.270 1 105 5.5E-18 T 11-10-2018 IPR038670 HslJ-like superfamily syc0171_c 64ca9c028d7b9bd16ebbb1e054d35b16 228 Gene3D G3DSA:2.40.128.270 109 224 2.4E-28 T 11-10-2018 IPR038670 HslJ-like superfamily syc2459_c aa02da34424cbf749bcd8f31c213a26b 480 Pfam PF00361 Proton-conducting membrane transporter 115 376 5.6E-36 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc0080_d b12ee0847bbe3dc90ba60a1beecf7d1a 823 Pfam PF01136 Peptidase family U32 81 307 3.8E-80 T 11-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 syc0080_d b12ee0847bbe3dc90ba60a1beecf7d1a 823 Pfam PF01136 Peptidase family U32 609 815 5.0E-9 T 11-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 syc0080_d b12ee0847bbe3dc90ba60a1beecf7d1a 823 Pfam PF12392 Collagenase 394 513 4.9E-23 T 11-10-2018 IPR020988 Peptidase U32, collagenase syc1952_c bcced79830b7b8a521aed1594b111ee0 143 Gene3D G3DSA:3.40.140.10 9 143 2.2E-24 T 11-10-2018 syc1952_c bcced79830b7b8a521aed1594b111ee0 143 SUPERFAMILY SSF53927 10 139 9.68E-21 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 syc1952_c bcced79830b7b8a521aed1594b111ee0 143 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 9 108 1.1E-4 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain syc0773_d 3c14d3914a71500316bae00b205d82b4 183 Pfam PF13274 Protein of unknown function (DUF4065) 31 141 4.2E-15 T 11-10-2018 IPR025272 Domain of unknown function DUF4065 syc0397_d 88ec078fec033074981c33996a553b71 614 Gene3D G3DSA:3.40.50.300 254 434 1.3E-23 T 11-10-2018 syc0397_d 88ec078fec033074981c33996a553b71 614 Pfam PF01926 50S ribosome-binding GTPase 282 376 2.9E-11 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 syc0397_d 88ec078fec033074981c33996a553b71 614 SUPERFAMILY SSF52540 273 515 1.95E-21 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc0915_c 553bbcb8d7f14f454655f6584bff2aed 496 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 2 481 2.6E-154 T 11-10-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc0915_c 553bbcb8d7f14f454655f6584bff2aed 496 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 321 340 3.3E-37 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc0915_c 553bbcb8d7f14f454655f6584bff2aed 496 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 162 186 3.3E-37 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc0915_c 553bbcb8d7f14f454655f6584bff2aed 496 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 376 402 3.3E-37 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc0915_c 553bbcb8d7f14f454655f6584bff2aed 496 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 233 257 3.3E-37 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc0915_c 553bbcb8d7f14f454655f6584bff2aed 496 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 132 151 3.3E-37 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc0915_c 553bbcb8d7f14f454655f6584bff2aed 496 Pfam PF00361 Proton-conducting membrane transporter 126 419 1.3E-68 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 syc2450_d 0e43a295e898b36dedafacfd25c09f7e 569 Pfam PF04966 Carbohydrate-selective porin, OprB family 137 569 4.5E-37 T 11-10-2018 IPR007049 Carbohydrate-selective porin OprB GO:0008643|GO:0015288|GO:0016021 syc2450_d 0e43a295e898b36dedafacfd25c09f7e 569 SUPERFAMILY SSF56935 254 540 2.69E-6 T 11-10-2018 syc2450_d 0e43a295e898b36dedafacfd25c09f7e 569 Pfam PF00395 S-layer homology domain 78 120 1.6E-7 T 11-10-2018 IPR001119 S-layer homology domain syc0497_c 982af7ad65d08a2be6d1a2635b718f88 81 SMART SM01094 17 75 9.4E-25 T 11-10-2018 IPR008213 CpcD-like domain GO:0030089 syc0497_c 982af7ad65d08a2be6d1a2635b718f88 81 Pfam PF01383 CpcD/allophycocyanin linker domain 17 74 3.4E-21 T 11-10-2018 IPR008213 CpcD-like domain GO:0030089 syc0064_c 9649322cfda85b2b7ce4b94ae7b19647 511 SUPERFAMILY SSF56935 179 492 3.19E-5 T 11-10-2018 syc0064_c 9649322cfda85b2b7ce4b94ae7b19647 511 Pfam PF04966 Carbohydrate-selective porin, OprB family 112 492 3.4E-37 T 11-10-2018 IPR007049 Carbohydrate-selective porin OprB GO:0008643|GO:0015288|GO:0016021 syc0064_c 9649322cfda85b2b7ce4b94ae7b19647 511 Pfam PF00395 S-layer homology domain 53 95 4.0E-8 T 11-10-2018 IPR001119 S-layer homology domain syc1482_d 46970a00d0ecd3f4451e6ae7385a4e59 223 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 84 174 1.9E-14 T 11-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 syc1482_d 46970a00d0ecd3f4451e6ae7385a4e59 223 Gene3D G3DSA:2.60.120.620 1 176 3.4E-41 T 11-10-2018 syc1482_d 46970a00d0ecd3f4451e6ae7385a4e59 223 SMART SM00702 9 175 4.1E-9 T 11-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 syc1482_d 46970a00d0ecd3f4451e6ae7385a4e59 223 Hamap MF_00657 PKHD-type hydroxylase YbiX [ybiX]. 1 223 41.37 T 11-10-2018 IPR023550 PKHD-type hydroxylase GO:0016706|GO:0055114 syc1482_d 46970a00d0ecd3f4451e6ae7385a4e59 223 Gene3D G3DSA:4.10.860.20 178 223 2.8E-10 T 11-10-2018 syc2395_c db2a806c65d16516e3cc355993ad05c2 332 Pfam PF03783 Curli production assembly/transport component CsgG 43 239 5.4E-61 T 11-10-2018 IPR005534 Curli production assembly/transport component CsgG GO:0030288 syc0040_d b91d47c423ca0c81764d6bb38ef37e34 168 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 18 161 3.0E-40 T 11-10-2018 IPR018639 Domain of unknown function DUF2062 syc1918_c eed24c06c017ea1eef4c08e7f7ca8913 317 Pfam PF02653 Branched-chain amino acid transport system / permease component 40 307 1.5E-46 T 11-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 syc0074_d 1c38e281918daf621381f25e9e0fff67 392 Pfam PF02096 60Kd inner membrane protein 27 339 1.7E-35 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 syc0074_d 1c38e281918daf621381f25e9e0fff67 392 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 26 339 1.5E-58 T 11-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 syc0031_d ba64c1c5579c6256ddad42e433e7abb8 890 SUPERFAMILY SSF48208 420 874 6.8E-47 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 syc0031_d ba64c1c5579c6256ddad42e433e7abb8 890 Pfam PF03200 Glycosyl hydrolase family 63 C-terminal domain 693 785 9.3E-8 T 11-10-2018 IPR031335 Glycosyl hydrolase family 63, C-terminal KEGG: 00510+3.2.1.106|MetaCyc: PWY-7918|MetaCyc: PWY-7919|Reactome: R-HSA-4793954|Reactome: R-HSA-532668 syc1532_d 937bdd4ca17adbc26463da0b55eb96a3 157 Pfam PF11360 Protein of unknown function (DUF3110) 24 116 4.6E-36 T 11-10-2018 IPR021503 Protein of unknown function DUF3110 syc2251_d 777fd4df63deba275856f120c7ef642d 269 Pfam PF04015 Domain of unknown function (DUF362) 30 243 2.9E-19 T 11-10-2018 IPR007160 Domain of unknown function DUF362 syc1328_d d3e1f866d451f8ed50e1ab5114912893 241 Pfam PF13649 Methyltransferase domain 45 141 2.6E-10 T 11-10-2018 syc1328_d d3e1f866d451f8ed50e1ab5114912893 241 SUPERFAMILY SSF53335 6 223 1.69E-28 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase syc1328_d d3e1f866d451f8ed50e1ab5114912893 241 Gene3D G3DSA:3.40.50.150 1 167 3.7E-25 T 11-10-2018 syc0273_d bf3b9cf3f2db0589036abc9cb0e4f7fb 364 Pfam PF04632 Fusaric acid resistance protein family 12 353 2.3E-21 T 11-10-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0022857|GO:0055085 syc1841_d 767cd1cf1834972f2daf9a88d5018f6c 72 Gene3D G3DSA:2.30.30.140 18 72 5.2E-28 T 11-10-2018 syc1841_d 767cd1cf1834972f2daf9a88d5018f6c 72 Pfam PF11623 NAD(P)H dehydrogenase subunit S 19 69 1.6E-29 T 11-10-2018 IPR021659 NADH dehydrogenase-like complex, subunit S GO:0009767 syc1099_c 2e933a2cc23f3cf2ae97092ea57434a4 116 Pfam PF06868 Protein of unknown function (DUF1257) 21 106 1.5E-22 T 11-10-2018 IPR009666 Uncharacterised protein family Ycf35 syc0345_c eac754b803f70d27ddbd0e61dbb36413 54 Pfam PF00589 Phage integrase family 1 38 1.3E-9 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 syc0345_c eac754b803f70d27ddbd0e61dbb36413 54 SUPERFAMILY SSF56349 1 45 1.97E-9 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 syc0345_c eac754b803f70d27ddbd0e61dbb36413 54 Gene3D G3DSA:1.10.443.10 1 49 7.5E-8 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 syc0683_c 394f48879a6cd7b3ebc9c676ba58fec4 168 Gene3D G3DSA:2.30.30.40 35 152 3.3E-17 T 11-10-2018 syc0683_c 394f48879a6cd7b3ebc9c676ba58fec4 168 Pfam PF01584 CheW-like domain 22 159 9.4E-26 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 syc0683_c 394f48879a6cd7b3ebc9c676ba58fec4 168 SUPERFAMILY SSF50341 18 159 2.35E-26 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 syc0683_c 394f48879a6cd7b3ebc9c676ba58fec4 168 SMART SM00260 17 158 1.7E-19 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 syc0683_c 394f48879a6cd7b3ebc9c676ba58fec4 168 Gene3D G3DSA:2.40.50.180 39 157 3.3E-17 T 11-10-2018 syc1104_d 1b75e77f7e55b0176d52405688d8cf17 74 Hamap MF_01355 NAD(P)H-quinone oxidoreductase subunit L [ndhL]. 3 72 20.057 T 11-10-2018 IPR019654 NAD(P)H-quinone oxidoreductase subunit L GO:0016655|GO:0055114 syc1104_d 1b75e77f7e55b0176d52405688d8cf17 74 Pfam PF10716 NADH dehydrogenase transmembrane subunit 4 71 5.6E-29 T 11-10-2018 IPR019654 NAD(P)H-quinone oxidoreductase subunit L GO:0016655|GO:0055114 syc1353_d abc7b89196fe91f44e23e24b2dec0092 368 Pfam PF00953 Glycosyl transferase family 4 121 289 3.9E-34 T 11-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 syc1353_d abc7b89196fe91f44e23e24b2dec0092 368 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 48 368 20.021 T 11-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 syc1353_d abc7b89196fe91f44e23e24b2dec0092 368 ProSitePatterns PS01348 MraY family signature 2. 210 221 - T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 syc1353_d abc7b89196fe91f44e23e24b2dec0092 368 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 63 360 8.5E-98 T 11-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 syc1353_d abc7b89196fe91f44e23e24b2dec0092 368 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 91 101 1.3E-4 T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 syc2016_c 71a459947bd1d7ad34724a6e0a915672 138 Pfam PF04134 Protein of unknown function, DUF393 10 120 8.4E-28 T 11-10-2018 IPR007263 Protein of unknown function DUF393 syc2226_c fc1bc55a6e4274190a06e1e8cf2dabb3 143 SUPERFAMILY SSF52425 4 127 9.03E-15 T 11-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 syc2464_c 11227790d5ae55c412893ae5069b5ea0 145 Gene3D G3DSA:1.10.760.10 25 145 6.4E-19 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 syc2464_c 11227790d5ae55c412893ae5069b5ea0 145 SUPERFAMILY SSF46626 39 145 3.11E-22 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 syc2464_c 11227790d5ae55c412893ae5069b5ea0 145 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 73 142 9.5E-12 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 syc2525_c 462a217759e069c1a246382e97a08ffa 236 Gene3D G3DSA:3.40.50.1820 27 232 1.8E-19 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold syc2525_c 462a217759e069c1a246382e97a08ffa 236 SUPERFAMILY SSF53474 45 231 3.57E-21 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold syc2525_c 462a217759e069c1a246382e97a08ffa 236 Pfam PF00561 alpha/beta hydrolase fold 63 111 1.1E-6 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 syc0679_d 7644e18d4587992a654b1239d288cbad 429 Pfam PF00106 short chain dehydrogenase 179 326 3.6E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR syc0679_d 7644e18d4587992a654b1239d288cbad 429 Pfam PF04116 Fatty acid hydroxylase superfamily 15 172 6.2E-9 T 11-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 syc0679_d 7644e18d4587992a654b1239d288cbad 429 SUPERFAMILY SSF51735 174 373 3.96E-22 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily syc0679_d 7644e18d4587992a654b1239d288cbad 429 Gene3D G3DSA:3.40.50.720 166 377 1.0E-18 T 11-10-2018 syc2271_d b0797ae37230a482cd782db2eb30e075 221 SMART SM00567 E-Z type HEAT repeats 146 175 6.3E-6 T 11-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 syc2271_d b0797ae37230a482cd782db2eb30e075 221 SMART SM00567 E-Z type HEAT repeats 17 46 78.0 T 11-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 syc2271_d b0797ae37230a482cd782db2eb30e075 221 SMART SM00567 E-Z type HEAT repeats 177 206 4.6E-4 T 11-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 syc2271_d b0797ae37230a482cd782db2eb30e075 221 SMART SM00567 E-Z type HEAT repeats 83 112 630.0 T 11-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 syc2271_d b0797ae37230a482cd782db2eb30e075 221 SMART SM00567 E-Z type HEAT repeats 115 144 0.019 T 11-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 syc2271_d b0797ae37230a482cd782db2eb30e075 221 SMART SM00567 E-Z type HEAT repeats 48 80 0.3 T 11-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 syc2271_d b0797ae37230a482cd782db2eb30e075 221 SUPERFAMILY SSF48371 10 214 4.07E-36 T 11-10-2018 IPR016024 Armadillo-type fold syc2271_d b0797ae37230a482cd782db2eb30e075 221 Gene3D G3DSA:1.25.10.10 2 65 4.1E-6 T 11-10-2018 IPR011989 Armadillo-like helical syc2271_d b0797ae37230a482cd782db2eb30e075 221 Pfam PF13646 HEAT repeats 8 94 1.2E-12 T 11-10-2018 syc2271_d b0797ae37230a482cd782db2eb30e075 221 Pfam PF13646 HEAT repeats 103 187 1.7E-15 T 11-10-2018 syc2271_d b0797ae37230a482cd782db2eb30e075 221 Gene3D G3DSA:1.25.10.10 66 217 2.2E-26 T 11-10-2018 IPR011989 Armadillo-like helical syc1549_d 10e0b709aff1a9d890c166457bba922d 278 PRINTS PR00075 Fatty acid desaturase family 1 signature 37 59 2.8E-35 T 11-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 syc1549_d 10e0b709aff1a9d890c166457bba922d 278 PRINTS PR00075 Fatty acid desaturase family 1 signature 229 243 2.8E-35 T 11-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 syc1549_d 10e0b709aff1a9d890c166457bba922d 278 PRINTS PR00075 Fatty acid desaturase family 1 signature 60 80 2.8E-35 T 11-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 syc1549_d 10e0b709aff1a9d890c166457bba922d 278 PRINTS PR00075 Fatty acid desaturase family 1 signature 13 33 2.8E-35 T 11-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 syc1549_d 10e0b709aff1a9d890c166457bba922d 278 PRINTS PR00075 Fatty acid desaturase family 1 signature 186 207 2.8E-35 T 11-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 syc1549_d 10e0b709aff1a9d890c166457bba922d 278 PRINTS PR00075 Fatty acid desaturase family 1 signature 97 126 2.8E-35 T 11-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 syc1549_d 10e0b709aff1a9d890c166457bba922d 278 Pfam PF00487 Fatty acid desaturase 37 256 8.3E-16 T 11-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 syc2423_d a526f930f18480311037625bc0a17582 234 Pfam PF04228 Putative neutral zinc metallopeptidase 41 205 6.8E-13 T 11-10-2018 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative syc0858_c 66560757825794ede938ddc09f3ad28f 166 Pfam PF06695 Putative small multi-drug export protein 23 143 8.9E-37 T 11-10-2018 IPR009577 Putative small multi-drug export syc1189_d eb6c92e83d5f1f13531bd5ef905af4af 332 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 267 291 - T 11-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 syc1189_d eb6c92e83d5f1f13531bd5ef905af4af 332 Pfam PF01098 Cell cycle protein 1 308 4.4E-88 T 11-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 syc1066_d 42c57e125d6811902216736e69a3a029 145 Pfam PF11352 Protein of unknown function (DUF3155) 39 125 2.6E-49 T 11-10-2018 IPR021498 Protein of unknown function DUF3155 syc2463_c 6d1d7d281509f8c7d41c3d55ddfab834 731 Pfam PF09899 Putative amidoligase enzyme (DUF2126) 232 727 9.9E-171 T 11-10-2018 IPR018667 Domain of unknown function DUF2126 syc2463_c 6d1d7d281509f8c7d41c3d55ddfab834 731 Pfam PF09899 Putative amidoligase enzyme (DUF2126) 6 143 2.6E-38 T 11-10-2018 IPR018667 Domain of unknown function DUF2126 syc2123_d 20cd11c1a067a1dde012497a9b2b9af2 389 Gene3D G3DSA:3.90.550.10 1 247 3.4E-69 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases syc2123_d 20cd11c1a067a1dde012497a9b2b9af2 389 SUPERFAMILY SSF53448 1 249 1.67E-71 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases syc2123_d 20cd11c1a067a1dde012497a9b2b9af2 389 SUPERFAMILY SSF51161 255 346 6.63E-14 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily syc2123_d 20cd11c1a067a1dde012497a9b2b9af2 389 Hamap MF_02085 UTP--glucose-1-phosphate uridylyltransferase [cugP]. 1 384 78.273 T 11-10-2018 IPR037538 UTP--glucose-1-phosphate uridylyltransferase, cyanobacteria GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 syc2123_d 20cd11c1a067a1dde012497a9b2b9af2 389 Gene3D G3DSA:2.160.10.10 248 370 9.9E-11 T 11-10-2018 syc2123_d 20cd11c1a067a1dde012497a9b2b9af2 389 Pfam PF00483 Nucleotidyl transferase 2 245 4.5E-55 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 syc0893_d 79bc3c44ad63cfccfaa2c53adafd60e6 175 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 11-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 syc0893_d 79bc3c44ad63cfccfaa2c53adafd60e6 175 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 162 24.11 T 11-10-2018 IPR022973 Ribosomal protein L10 syc0893_d 79bc3c44ad63cfccfaa2c53adafd60e6 175 Gene3D G3DSA:3.30.70.1730 3 163 4.4E-37 T 11-10-2018 syc0893_d 79bc3c44ad63cfccfaa2c53adafd60e6 175 SUPERFAMILY SSF160369 4 172 3.79E-50 T 11-10-2018 syc0893_d 79bc3c44ad63cfccfaa2c53adafd60e6 175 Pfam PF00466 Ribosomal protein L10 5 102 1.5E-27 T 11-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 syc0430_d 994cc69fec493a0620b7b0cde30be436 225 Pfam PF09335 SNARE associated Golgi protein 52 169 6.4E-28 T 11-10-2018 IPR032816 SNARE associated Golgi protein syc0793_c 3f58352f6fd8f36073af0087c774648d 89 Pfam PF05488 PAAR motif 11 79 5.1E-23 T 11-10-2018 IPR008727 PAAR motif syc0793_c 3f58352f6fd8f36073af0087c774648d 89 Gene3D G3DSA:2.60.200.60 5 86 2.8E-17 T 11-10-2018 syc1739_d eb39a8bb95c18efcbdccb5d91fd880ff 201 Pfam PF08819 Domain of unknown function (DUF1802) 9 177 1.1E-51 T 11-10-2018 IPR014923 Protein of unknown function DUF1802 syc0805_c bf4b31a09e05588acf97f20a3b76b0e6 120 Pfam PF08774 VRR-NUC domain 4 107 1.8E-16 T 11-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 syc0805_c bf4b31a09e05588acf97f20a3b76b0e6 120 SMART SM00990 3 108 1.1E-12 T 11-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 syc0805_c bf4b31a09e05588acf97f20a3b76b0e6 120 Gene3D G3DSA:3.40.1350.10 2 117 1.4E-11 T 11-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 syc0508_d a3a57cd0278c085a92b7668f4127a65e 158 Pfam PF07080 Protein of unknown function (DUF1348) 11 140 6.0E-66 T 11-10-2018 IPR009783 Protein of unknown function DUF1348 syc0508_d a3a57cd0278c085a92b7668f4127a65e 158 SUPERFAMILY SSF54427 6 158 2.27E-80 T 11-10-2018 IPR032710 NTF2-like domain superfamily syc0508_d a3a57cd0278c085a92b7668f4127a65e 158 Gene3D G3DSA:3.10.450.50 14 158 8.3E-76 T 11-10-2018 syc0610_c ded24c78abcd99fb94582ad9b6151ca0 399 SUPERFAMILY SSF53756 13 354 9.42E-31 T 11-10-2018 syc0610_c ded24c78abcd99fb94582ad9b6151ca0 399 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 6 385 1.8E-102 T 11-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 syc0610_c ded24c78abcd99fb94582ad9b6151ca0 399 Pfam PF02684 Lipid-A-disaccharide synthetase 7 382 5.1E-94 T 11-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 syc0735_d 8f54adc61b022d276d717df9d43ce05e 260 Pfam PF06182 ABC-2 family transporter protein 37 259 4.7E-68 T 11-10-2018 IPR010390 Protein of unknown function DUF990 syc2083_c 35b1f0e8961b7cc8f847b6b8f7ac25be 407 TIGRFAM TIGR02669 SpoIID_LytB: SpoIID/LytB domain 124 387 1.1E-88 T 11-10-2018 IPR013486 Sporulation stage II protein D, amidase enhancer LytB GO:0030435 syc2083_c 35b1f0e8961b7cc8f847b6b8f7ac25be 407 Pfam PF08486 Stage II sporulation protein 120 210 4.6E-27 T 11-10-2018 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal syc1361_c 9e5968e769ef5633fc3192d1d620411d 150 Pfam PF14108 Domain of unknown function (DUF4281) 6 129 1.6E-41 T 11-10-2018 IPR025461 ABA DEFICIENT 4-like syc1238_c 90800c9786eccbfe1ea0575b544caf17 110 Pfam PF01934 Protein of unknown function DUF86 12 103 1.2E-25 T 11-10-2018 IPR008201 Protein of unknown function DUF86 syc1398_d d997ed6c27c3c1e1a184f1a78154842f 192 SUPERFAMILY SSF52374 1 185 2.91E-28 T 11-10-2018 syc1398_d d997ed6c27c3c1e1a184f1a78154842f 192 Pfam PF01467 Cytidylyltransferase-like 5 151 5.4E-11 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 syc1398_d d997ed6c27c3c1e1a184f1a78154842f 192 Gene3D G3DSA:3.40.50.620 1 191 1.8E-31 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold syc0362_c 118e96b9559a57fae3085113de899b5e 130 PIRSF PIRSF037673 3 130 3.2E-57 T 11-10-2018 IPR017260 Uncharacterised conserved protein UCP037673 syc0362_c 118e96b9559a57fae3085113de899b5e 130 Pfam PF14251 Domain of unknown function (DUF4346) 13 130 1.5E-54 T 11-10-2018 IPR025595 Domain of unknown function DUF4346 syc0839_d 39b4661626b9dcb27aa606fad166242a 91 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 18 88 5.4E-22 T 11-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 syc0839_d 39b4661626b9dcb27aa606fad166242a 91 SUPERFAMILY SSF54736 14 91 1.99E-25 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like syc0839_d 39b4661626b9dcb27aa606fad166242a 91 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 2 91 15.202 T 11-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS syc0839_d 39b4661626b9dcb27aa606fad166242a 91 Gene3D G3DSA:3.30.1390.10 1 91 1.4E-22 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like syc0225_c 90257f94bddd94d554e243969cbb64d4 208 Gene3D G3DSA:3.10.310.50 12 159 9.1E-29 T 11-10-2018 syc0225_c 90257f94bddd94d554e243969cbb64d4 208 Pfam PF04536 TPM domain 23 148 7.0E-24 T 11-10-2018 IPR007621 TPM domain syc1008_d 12e73fb910323e137ce7ad21858da4b2 394 Pfam PF03739 Predicted permease YjgP/YjgQ family 32 390 4.8E-85 T 11-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 syc1408_d a7587e695b21fb7672a1d4319755c7eb 173 Pfam PF06897 Protein of unknown function (DUF1269) 60 160 1.1E-35 T 11-10-2018 IPR009200 Protein of unknown function DUF1269, membrane associated syc1946_d de500bb346ad23b92365f1df5023fd6b 277 Gene3D G3DSA:3.60.110.10 3 276 7.9E-94 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily syc1946_d de500bb346ad23b92365f1df5023fd6b 277 Pfam PF00795 Carbon-nitrogen hydrolase 6 255 4.9E-57 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 syc1946_d de500bb346ad23b92365f1df5023fd6b 277 SUPERFAMILY SSF56317 5 273 1.44E-83 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily syc0545_d 28e0d58e790db8bd673c6814a1f6d38b 1088 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 654 944 4.4E-12 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase syc0545_d 28e0d58e790db8bd673c6814a1f6d38b 1088 Gene3D G3DSA:3.60.10.10 651 951 3.2E-47 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily syc0545_d 28e0d58e790db8bd673c6814a1f6d38b 1088 SUPERFAMILY SSF56219 643 954 2.52E-37 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily syc0545_d 28e0d58e790db8bd673c6814a1f6d38b 1088 SUPERFAMILY SSF51120 829 1033 2.62E-13 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal syc0545_d 28e0d58e790db8bd673c6814a1f6d38b 1088 Gene3D G3DSA:2.150.10.10 954 1074 8.5E-10 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal syc1294_d c803bfdcba000ed50351382d902e544e 55 Gene3D G3DSA:1.10.8.550 3 54 6.1E-23 T 11-10-2018 syc1294_d c803bfdcba000ed50351382d902e544e 55 Pfam PF08369 Proto-chlorophyllide reductase 57 kD subunit 5 49 5.8E-20 T 11-10-2018 IPR013580 Proto-chlorophyllide/chlorophyllide reductase, C-terminal GO:0015979|GO:0015995|GO:0016491|GO:0055114 KEGG: 00860+1.3.7.7|MetaCyc: PWY-5531|MetaCyc: PWY-7159 syc2428_c 125e0c1c4329e5a9f5cec9942e689db6 291 Pfam PF00520 Ion transport protein 39 255 1.9E-28 T 11-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 syc2428_c 125e0c1c4329e5a9f5cec9942e689db6 291 Gene3D G3DSA:1.10.287.70 38 250 1.9E-51 T 11-10-2018 syc2428_c 125e0c1c4329e5a9f5cec9942e689db6 291 PRINTS PR00169 Potassium channel signature 31 59 9.0E-26 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 syc2428_c 125e0c1c4329e5a9f5cec9942e689db6 291 PRINTS PR00169 Potassium channel signature 99 119 9.0E-26 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 syc2428_c 125e0c1c4329e5a9f5cec9942e689db6 291 PRINTS PR00169 Potassium channel signature 135 161 9.0E-26 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 syc2428_c 125e0c1c4329e5a9f5cec9942e689db6 291 PRINTS PR00169 Potassium channel signature 73 96 9.0E-26 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 syc2428_c 125e0c1c4329e5a9f5cec9942e689db6 291 PRINTS PR00169 Potassium channel signature 193 215 9.0E-26 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 syc2428_c 125e0c1c4329e5a9f5cec9942e689db6 291 PRINTS PR00169 Potassium channel signature 164 187 9.0E-26 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 syc2428_c 125e0c1c4329e5a9f5cec9942e689db6 291 PRINTS PR00169 Potassium channel signature 222 248 9.0E-26 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 syc2428_c 125e0c1c4329e5a9f5cec9942e689db6 291 SUPERFAMILY SSF81324 37 245 5.28E-47 T 11-10-2018 syc2092_c 8e095175287f2ab1599e2c199b93da21 237 SMART SM00754 101 235 7.4E-7 T 11-10-2018 IPR010895 CHRD syc2092_c 8e095175287f2ab1599e2c199b93da21 237 Pfam PF07452 CHRD domain 105 232 1.8E-15 T 11-10-2018 IPR010895 CHRD syc1550_c fd40d7383204153ca1568975f3ddccb2 186 SUPERFAMILY SSF55729 15 168 2.03E-30 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase syc1550_c fd40d7383204153ca1568975f3ddccb2 186 Gene3D G3DSA:3.40.630.30 4 177 6.6E-31 T 11-10-2018 syc1550_c fd40d7383204153ca1568975f3ddccb2 186 Pfam PF00583 Acetyltransferase (GNAT) family 69 160 3.2E-16 T 11-10-2018 IPR000182 GNAT domain syc0932_c 211a0273a6f20a540bdcc4165587d0d1 108 Pfam PF01169 Uncharacterized protein family UPF0016 8 82 1.8E-21 T 11-10-2018 IPR001727 Gdt1 family syc0779_c 9214b9e5f1c76fd8ae5f11002f1688be 480 Pfam PF05954 Phage late control gene D protein (GPD) 106 317 1.6E-18 T 11-10-2018 syc0779_c 9214b9e5f1c76fd8ae5f11002f1688be 480 SUPERFAMILY SSF69279 4 179 2.0E-21 T 11-10-2018 syc1156_d d4aee93607686d5ba38628a81551f9cf 467 TIGRFAM TIGR00947 2A73: putative bicarbonate transporter, IctB family 26 449 1.3E-192 T 11-10-2018 IPR006007 Inorganic carbon transporter syc1156_d d4aee93607686d5ba38628a81551f9cf 467 Pfam PF04932 O-Antigen ligase 230 379 5.5E-18 T 11-10-2018 IPR007016 O-antigen ligase-related syc1523_d cce42101b6f954f2488affa4540a3118 175 Pfam PF13079 Protein of unknown function (DUF3916) 27 165 2.8E-44 T 11-10-2018 IPR025075 Protein of unknown function DUF3916 syc2340_d 2e0ab69868d0a212e325182ce918f65a 67 Pfam PF11211 Protein of unknown function (DUF2997) 6 52 5.3E-21 T 11-10-2018 IPR021375 Protein of unknown function DUF2997 syc0651_d 8411f25b76cf5699f659107306c368d7 605 Pfam PF09992 Phosphodiester glycosidase 417 595 4.0E-35 T 11-10-2018 IPR018711 Phosphodiester glycosidase syc1784_c f08419b716733ae86c592f4d3d7a1a04 208 SUPERFAMILY SSF54909 10 92 1.39E-12 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel syc1939_d 316e554a6d4aef617763dc933c4e2e1a 164 SUPERFAMILY SSF50199 60 154 7.06E-5 T 11-10-2018 syc0021_c c3309f6b4185bcee0578db7fce620bee 138 Pfam PF10722 Putative bacterial sensory transduction regulator 16 114 3.0E-10 T 11-10-2018 IPR019660 Putative sensory transduction regulator YbjN syc2456_c d45a315e4ed3fd1116fe944a65cd741f 193 Pfam PF13244 Domain of unknown function (DUF4040) 11 73 8.6E-12 T 11-10-2018 IPR025383 Domain of unknown function DUF4040 syc2385_c 585a134a83b5d564f0e1a8e4b0e1d138 730 Pfam PF12600 Protein of unknown function (DUF3769) 262 722 5.0E-161 T 11-10-2018 IPR022244 Protein of unknown function DUF3769 syc1509_d 2af8829cf1f0e4f6b4fce0ec3e188341 307 Pfam PF02628 Cytochrome oxidase assembly protein 19 273 1.6E-21 T 11-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 syc0289_d 50a52efc1df9db86256d57b8c5070f9b 539 PIRSF PIRSF038984 1 535 4.1E-245 T 11-10-2018 IPR028348 FAD dependent protein syc0289_d 50a52efc1df9db86256d57b8c5070f9b 539 Gene3D G3DSA:3.30.70.2700 1 80 3.1E-27 T 11-10-2018 syc0289_d 50a52efc1df9db86256d57b8c5070f9b 539 SUPERFAMILY SSF51905 100 528 8.97E-37 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc0289_d 50a52efc1df9db86256d57b8c5070f9b 539 Pfam PF01593 Flavin containing amine oxidoreductase 212 269 1.1E-4 T 11-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 syc0289_d 50a52efc1df9db86256d57b8c5070f9b 539 Gene3D G3DSA:3.50.50.60 85 306 8.8E-81 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc0289_d 50a52efc1df9db86256d57b8c5070f9b 539 Gene3D G3DSA:3.50.50.60 467 533 1.0E-14 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily syc0183_d 89b2ec1a2e87c785e33a1bdf837faa10 231 Pfam PF04955 HupE / UreJ protein 28 216 2.8E-44 T 11-10-2018 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein syc0183_d 89b2ec1a2e87c785e33a1bdf837faa10 231 PIRSF PIRSF016919 18 220 3.1E-28 T 11-10-2018 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein syc0782_c 194f7969e80d01aaf19446dc87c47e08 950 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 58 410 9.6E-33 T 11-10-2018 IPR010090 Phage tail tape measure protein syc0782_c 194f7969e80d01aaf19446dc87c47e08 950 Pfam PF10145 Phage-related minor tail protein 108 299 2.4E-22 T 11-10-2018 IPR010090 Phage tail tape measure protein syc2255_d 6a211565ff3d5841e5ffbafb982619a0 246 SUPERFAMILY SSF53474 17 238 8.78E-22 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold syc2028_d 0eb399fcacaef5823c323466a902fd62 95 Pfam PF11731 Pathogenicity locus 14 95 1.3E-16 T 11-10-2018 IPR021725 Pathogenicity locus syc0866_c 46cda20b1ad7af2ab8e2273d5105af43 307 Pfam PF04773 FecR protein 64 145 6.9E-8 T 11-10-2018 IPR006860 FecR protein syc0099_d 390fb0376944424bfadf390ae20068b1 188 Pfam PF02698 DUF218 domain 30 142 6.6E-16 T 11-10-2018 IPR003848 Domain of unknown function DUF218 syc0187_c 6d7bce0ba5c9419557d6fed32fc67e75 111 Gene3D G3DSA:2.30.30.40 27 103 8.2E-6 T 11-10-2018 syc0487_c a5fea9b1e90ad7ad3133a91c2ee19f1d 311 Pfam PF14261 Domain of unknown function (DUF4351) 252 308 3.9E-21 T 11-10-2018 IPR025587 Domain of unknown function DUF4351 syc2122_d b2b7ca72473b8bc56a2410778a0acda1 278 Pfam PF02616 Segregation and condensation protein ScpA 15 257 2.0E-29 T 11-10-2018 IPR003768 Segregation and condensation protein A syc0623_c d54730dc5d37a2d34a78773ada792462 164 Pfam PF11068 YlqD protein 23 161 2.2E-46 T 11-10-2018 IPR021297 YlqD protein syc1526_c 09414b4f07326980fa7e80bfe7f6734e 254 Pfam PF00106 short chain dehydrogenase 10 211 3.4E-29 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR syc1526_c 09414b4f07326980fa7e80bfe7f6734e 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 9.3E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR syc1526_c 09414b4f07326980fa7e80bfe7f6734e 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 186 9.3E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR syc1526_c 09414b4f07326980fa7e80bfe7f6734e 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 9.3E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR syc1526_c 09414b4f07326980fa7e80bfe7f6734e 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 190 207 9.3E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR syc1526_c 09414b4f07326980fa7e80bfe7f6734e 254 SUPERFAMILY SSF51735 9 254 6.15E-60 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily syc1526_c 09414b4f07326980fa7e80bfe7f6734e 254 Gene3D G3DSA:3.40.50.720 1 254 2.6E-56 T 11-10-2018 syc0874_d 23300e06157c60d72ad45190c1fc2481 188 Hamap MF_00437 Photosystem I assembly protein Ycf4 [ycf4]. 1 188 41.214 T 11-10-2018 IPR003359 Photosystem I Ycf4, assembly GO:0009522|GO:0009579|GO:0015979|GO:0016021 syc0874_d 23300e06157c60d72ad45190c1fc2481 188 ProDom PD003698 YCF4 ASSEMBLY I PHOTOSYSTEM CHLOROPLAST PLASTID MEMBRANE PHOTOSYNTHESIS TRANSMEMBRANE THYLAKOID 14 188 6.0E-96 T 11-10-2018 IPR003359 Photosystem I Ycf4, assembly GO:0009522|GO:0009579|GO:0015979|GO:0016021 syc0874_d 23300e06157c60d72ad45190c1fc2481 188 Pfam PF02392 Ycf4 13 187 6.4E-86 T 11-10-2018 IPR003359 Photosystem I Ycf4, assembly GO:0009522|GO:0009579|GO:0015979|GO:0016021 syc1737_d 7077e9f6d4e74534a6836d7544362bee 167 Pfam PF14271 Domain of unknown function (DUF4359) 37 146 5.9E-22 T 11-10-2018 IPR025578 Protein of unknown function DUF4359 syc0465_d e50ebff9298cedd76bbe1ceb3367afdc 108 SUPERFAMILY SSF57184 18 105 3.61E-5 T 11-10-2018 IPR009030 Growth factor receptor cysteine-rich domain superfamily syc0061_d 7111afed9ad8a3397ff0dd52c6e69c47 450 Pfam PF11850 Protein of unknown function (DUF3370) 18 439 4.1E-191 T 11-10-2018 IPR021801 Protein of unknown function DUF3370 syc1648_c 54916a2796bd5a3971af10d42ee6418e 316 Pfam PF14233 Domain of unknown function (DUF4335) 5 179 9.9E-45 T 11-10-2018 IPR025569 Protein of unknown function DUF4335 syc1026_d 7a12f51771d1eed792f6ea25e7d9f237 117 Pfam PF08808 RES domain 10 114 3.8E-16 T 11-10-2018 IPR014914 RES domain syc1775_d c0f2bfb84311ca494106aea35becdac7 157 Pfam PF06146 Phosphate-starvation-inducible E 75 142 2.5E-20 T 11-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like syc1132_d 9ba9197c03d40c877dc851249060793c 88 Pfam PF05154 TM2 domain 11 64 8.2E-13 T 11-10-2018 IPR007829 TM2 domain syc2216_d e7f2cc22c005a63d5cf8722841778076 330 Pfam PF01882 Protein of unknown function DUF58 222 298 4.3E-13 T 11-10-2018 IPR002881 Domain of unknown function DUF58 syc1782_c 7948ca6ebcf9611c49171b3617f9ddcb 95 Pfam PF11691 Protein of unknown function (DUF3288) 7 94 3.8E-37 T 11-10-2018 IPR021705 Protein of unknown function DUF3288 syc0138_c a8996e9a66812eb09c848c8ca726c480 327 Pfam PF00395 S-layer homology domain 150 196 8.0E-6 T 11-10-2018 IPR001119 S-layer homology domain syc0138_c a8996e9a66812eb09c848c8ca726c480 327 Pfam PF00395 S-layer homology domain 241 271 0.018 T 11-10-2018 IPR001119 S-layer homology domain syc0138_c a8996e9a66812eb09c848c8ca726c480 327 Pfam PF00395 S-layer homology domain 74 120 5.5E-4 T 11-10-2018 IPR001119 S-layer homology domain syc1312_d 607f15c6a6739bfc820142ee6a2fc6a6 308 Pfam PF09990 Predicted membrane protein (DUF2231) 73 188 5.7E-28 T 11-10-2018 IPR019251 Domain of unknown function DUF2231, transmembrane syc1424_d f98af159bf3208f8e435c9892cdc7561 407 Pfam PF12704 MacB-like periplasmic core domain 23 248 2.4E-40 T 11-10-2018 IPR025857 MacB-like periplasmic core domain syc1424_d f98af159bf3208f8e435c9892cdc7561 407 Pfam PF02687 FtsX-like permease family 313 400 7.5E-12 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 syc0790_c ecfe8d31fa520e507824f3dacc69a1ea 279 Pfam PF09684 Phage tail protein (Tail_P2_I) 7 140 1.1E-16 T 11-10-2018 IPR006521 Tail protein I syc1295_c e95cc4df7deb2aaa9d05cbca0d285897 254 SUPERFAMILY SSF56784 20 240 1.38E-20 T 11-10-2018 IPR036412 HAD-like superfamily syc1295_c e95cc4df7deb2aaa9d05cbca0d285897 254 Gene3D G3DSA:1.10.150.240 32 111 1.8E-18 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 syc1295_c e95cc4df7deb2aaa9d05cbca0d285897 254 Gene3D G3DSA:3.40.50.1000 23 237 1.8E-18 T 11-10-2018 IPR023214 HAD superfamily syc1295_c e95cc4df7deb2aaa9d05cbca0d285897 254 Pfam PF12710 haloacid dehalogenase-like hydrolase 22 209 8.8E-7 T 11-10-2018 syc1435_d 383ca79b40bfc318bde24e52a57504a1 317 Pfam PF00005 ABC transporter 18 160 3.8E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 syc1435_d 383ca79b40bfc318bde24e52a57504a1 317 Gene3D G3DSA:3.40.50.300 1 229 5.6E-65 T 11-10-2018 syc1435_d 383ca79b40bfc318bde24e52a57504a1 317 SMART SM00382 26 208 4.2E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain syc1435_d 383ca79b40bfc318bde24e52a57504a1 317 SUPERFAMILY SSF52540 1 223 3.07E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc2442_c a727a72e64dd3c7778f8962faf2d7aa4 282 Gene3D G3DSA:1.20.1530.20 2 282 1.1E-22 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily syc2442_c a727a72e64dd3c7778f8962faf2d7aa4 282 Pfam PF01758 Sodium Bile acid symporter family 13 191 8.3E-11 T 11-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 syc1612_d 711b2130128a416cfe7bb43d8a2aa28a 307 Pfam PF02653 Branched-chain amino acid transport system / permease component 11 283 1.7E-30 T 11-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 syc0804_c b4a21f29cdf9a410a819377f3dcd1483 850 Pfam PF08273 Zinc-binding domain of primase-helicase 35 75 1.8E-15 T 11-10-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 syc0804_c b4a21f29cdf9a410a819377f3dcd1483 850 SMART SM00778 35 78 3.6E-13 T 11-10-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 syc0804_c b4a21f29cdf9a410a819377f3dcd1483 850 SUPERFAMILY SSF57783 13 109 3.23E-10 T 11-10-2018 syc0144_d 08784f48d0426ffe2d3f4bbd392b7158 235 Pfam PF03099 Biotin/lipoate A/B protein ligase family 66 171 5.9E-13 T 11-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 syc0144_d 08784f48d0426ffe2d3f4bbd392b7158 235 SUPERFAMILY SSF55681 7 231 7.87E-42 T 11-10-2018 syc0144_d 08784f48d0426ffe2d3f4bbd392b7158 235 Gene3D G3DSA:3.30.930.10 17 209 4.5E-37 T 11-10-2018 syc1018_d b4a5cb7d90be04b3c426d5ab2d18e9c7 188 Pfam PF13302 Acetyltransferase (GNAT) domain 12 152 6.8E-30 T 11-10-2018 IPR000182 GNAT domain syc1018_d b4a5cb7d90be04b3c426d5ab2d18e9c7 188 SUPERFAMILY SSF55729 7 175 1.36E-40 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase syc1018_d b4a5cb7d90be04b3c426d5ab2d18e9c7 188 Gene3D G3DSA:3.40.630.30 2 162 1.1E-42 T 11-10-2018 syc1487_d 9bc635a70b37f2f70c507a4e5142e47b 208 Pfam PF09335 SNARE associated Golgi protein 38 162 3.6E-18 T 11-10-2018 IPR032816 SNARE associated Golgi protein syc1360_d bc9cebc956c2ea6d5f53c62d30f29872 107 Pfam PF11282 Protein of unknown function (DUF3082) 19 97 4.5E-31 T 11-10-2018 IPR021434 Protein of unknown function DUF3082 syc1151_c 73c139711a2204f6d8433ac2b800ec2c 199 Pfam PF11375 Protein of unknown function (DUF3177) 8 198 9.9E-76 T 11-10-2018 IPR021515 Protein of unknown function DUF3177 syc0049_d 68046acf13f2e100518d820103222356 271 Pfam PF02633 Creatinine amidohydrolase 15 255 1.0E-64 T 11-10-2018 IPR003785 Creatininase/formamide hydrolase KEGG: 00740+3.5.1.102|MetaCyc: PWY-6167 syc0049_d 68046acf13f2e100518d820103222356 271 Gene3D G3DSA:3.40.50.10310 8 259 2.0E-67 T 11-10-2018 IPR024087 Creatininase-like superfamily KEGG: 00740+3.5.1.102|MetaCyc: PWY-6167 syc0049_d 68046acf13f2e100518d820103222356 271 SUPERFAMILY SSF102215 10 256 1.57E-74 T 11-10-2018 IPR024087 Creatininase-like superfamily KEGG: 00740+3.5.1.102|MetaCyc: PWY-6167 syc1566_d 35f6469d9da8359416f8e04d9c822445 129 Gene3D G3DSA:3.10.180.10 4 118 4.5E-18 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase syc1566_d 35f6469d9da8359416f8e04d9c822445 129 SUPERFAMILY SSF54593 7 127 4.68E-22 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase syc0820_d 7820e082f8bcd50cf6b8ddf072e0700b 231 Pfam PF11780 Protein of unknown function (DUF3318) 24 166 1.7E-39 T 11-10-2018 IPR021751 Protein of unknown function DUF3318 syc1292_d 55cbbe4a3bd8ec74c2ddd39591560b46 252 SUPERFAMILY SSF52540 1 251 8.82E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc1292_d 55cbbe4a3bd8ec74c2ddd39591560b46 252 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 2 185 6.9E-17 T 11-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 syc1292_d 55cbbe4a3bd8ec74c2ddd39591560b46 252 Gene3D G3DSA:3.40.50.300 1 252 1.9E-43 T 11-10-2018 syc2090_c f6aea2f315b1d7de4cea54a6dd1dce78 273 Pfam PF10099 Anti-sigma-K factor rskA 62 256 1.2E-12 T 11-10-2018 IPR018764 Anti-sigma K factor RskA GO:0005886|GO:0016021 syc1759_c 5971c00f5c55aa4d049dbc18fbe470f0 347 Pfam PF13646 HEAT repeats 203 288 1.0E-12 T 11-10-2018 syc1759_c 5971c00f5c55aa4d049dbc18fbe470f0 347 Gene3D G3DSA:1.25.10.10 188 320 1.4E-12 T 11-10-2018 IPR011989 Armadillo-like helical syc1759_c 5971c00f5c55aa4d049dbc18fbe470f0 347 SUPERFAMILY SSF48371 197 292 1.86E-13 T 11-10-2018 IPR016024 Armadillo-type fold syc2346_d 9cff674c11110a58f2f0e5a2f8501e19 150 Pfam PF04982 HPP family 28 146 1.0E-34 T 11-10-2018 IPR007065 HPP syc0429_d f54defad18120123ac4675337d5ab94d 119 SUPERFAMILY SSF103511 74 118 8.5E-12 T 11-10-2018 syc1352_d 32e795a75d43989427174a96302dae7e 93 Pfam PF11332 Protein of unknown function (DUF3134) 18 88 2.9E-27 T 11-10-2018 IPR021481 Protein of unknown function DUF3134 syc2080_d 012859cc60409b8dc87739010c2999ab 277 Pfam PF07444 Ycf66 protein N-terminus 11 85 1.0E-30 T 11-10-2018 IPR010004 Uncharacterised protein family Ycf66 syc0716_c 6c27efff807a87dd526d49cf33d916a9 347 Pfam PF01594 AI-2E family transporter 19 343 9.0E-62 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like syc1376_c 8fc4d241c426569d87db28a9c28d172d 432 SUPERFAMILY SSF57997 78 218 1.83E-5 T 11-10-2018 syc1376_c 8fc4d241c426569d87db28a9c28d172d 432 Pfam PF11283 Protein of unknown function (DUF3084) 4 79 5.6E-33 T 11-10-2018 IPR021435 Protein of unknown function DUF3084 syc2146_c a50802fcaa0e8e58621cd105d8710264 81 Pfam PF13239 2TM domain 15 72 1.4E-6 T 11-10-2018 IPR025698 2TM domain syc0046_c 5bd7ae6e51f7775438c137e00f7856d4 429 SUPERFAMILY SSF111283 6 424 4.84E-81 T 11-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 syc0046_c 5bd7ae6e51f7775438c137e00f7856d4 429 Gene3D G3DSA:3.30.2290.10 6 188 3.6E-7 T 11-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal syc0046_c 5bd7ae6e51f7775438c137e00f7856d4 429 Pfam PF01523 Putative modulator of DNA gyrase 22 297 1.3E-42 T 11-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 syc1601_c 95287f667b531b296dc92329e6a3d31f 218 Gene3D G3DSA:3.40.50.150 3 216 9.6E-68 T 11-10-2018 syc1601_c 95287f667b531b296dc92329e6a3d31f 218 Pfam PF01596 O-methyltransferase 19 215 3.3E-53 T 11-10-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 syc1601_c 95287f667b531b296dc92329e6a3d31f 218 SUPERFAMILY SSF53335 18 215 2.76E-44 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase syc1221_c 6f2ebc20f1b1d74d87c3c34007eb4f91 72 Pfam PF10742 Protein of unknown function (DUF2555) 11 64 1.9E-30 T 11-10-2018 IPR019678 Protein of unknown function DUF2555 syc1174_c 99a7a66397c88a44c31da4848775cdf1 359 Pfam PF11805 Protein of unknown function (DUF3326) 7 339 2.0E-154 T 11-10-2018 IPR021763 Protein of unknown function DUF3326 syc1420_c 9db296aa176736e93acb758f8a435c26 212 Gene3D G3DSA:1.20.58.760 45 154 1.1E-9 T 11-10-2018 syc1420_c 9db296aa176736e93acb758f8a435c26 212 Pfam PF01434 Peptidase family M41 46 140 1.2E-4 T 11-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 syc1420_c 9db296aa176736e93acb758f8a435c26 212 SUPERFAMILY SSF140990 46 193 8.37E-20 T 11-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 syc1917_d a99cf9b2894a4d3d5f12e84e81404607 113 Pfam PF04020 Mycobacterial 4 TMS phage holin, superfamily IV 1 104 2.1E-34 T 11-10-2018 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV syc1817_c 314a01ab850124b04d5f459ad1e19660 268 Pfam PF04474 Protein of unknown function (DUF554) 32 257 3.6E-62 T 11-10-2018 IPR007563 Protein of unknown function DUF554 syc0840_d e392592174cd8b41677746920c9bcf0b 138 Pfam PF02517 CAAX protease self-immunity 3 78 1.5E-11 T 11-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 syc2062_c b0f1417086d089900932a36e847f3695 230 SUPERFAMILY SSF53335 20 173 9.9E-8 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase syc2145_c 1ff2b8960799cf9e93a6e4671d1c43fc 102 Pfam PF11378 Protein of unknown function (DUF3181) 10 98 3.1E-34 T 11-10-2018 IPR021518 Protein of unknown function DUF3181 syc1105_d e9e45a9601eb873cabde1306032b689e 109 Pfam PF11460 Protein of unknown function (DUF3007) 1 96 1.6E-37 T 11-10-2018 IPR021562 Protein of unknown function DUF3007 syc1611_d 3d88f4e227554899f8f517f9207e733e 313 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 297 1.3E-39 T 11-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 syc1843_c bed129c9d87d42440867716944e0ddc6 134 Pfam PF14250 AbrB-like transcriptional regulator 52 121 5.1E-31 T 11-10-2018 IPR027360 AbrB-like transcriptional regulator syc1506_c b59872a48be339550a40d7e3fa27c9fa 195 Pfam PF00510 Cytochrome c oxidase subunit III 23 194 2.7E-35 T 11-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 syc1506_c b59872a48be339550a40d7e3fa27c9fa 195 Gene3D G3DSA:1.20.120.80 16 195 1.2E-54 T 11-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 syc1506_c b59872a48be339550a40d7e3fa27c9fa 195 SUPERFAMILY SSF81452 6 194 2.88E-59 T 11-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 syc0087_d f977bfd773d2a2519aeafd6a45dff38a 239 SUPERFAMILY SSF81342 10 185 8.63E-11 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 syc0443_d 201f23b0ec890ee4df55fd7dd8892592 156 Pfam PF08847 Chlororespiratory reduction 6 8 155 6.2E-64 T 11-10-2018 IPR014946 Protein chlororespiratory reduction 6 syc0854_d d849b8be6bc9fd74936db67455d017bb 173 Pfam PF12046 Cofactor assembly of complex C subunit B 6 168 9.0E-54 T 11-10-2018 IPR021919 Cofactor assembly of complex C subunit B, CCB1 syc1330_d 59f4acfed58877eb25003ef547fe51dd 290 Pfam PF14491 Protein of unknown function (DUF4435) 23 236 5.2E-24 T 11-10-2018 IPR029492 Domain of unknown function DUF4435 syc1183_c 5d25cb22d8a08963e982720d0ac1858a 118 Pfam PF12966 N-ATPase, AtpR subunit 33 107 3.4E-8 T 11-10-2018 IPR017581 N-ATPase, AtpR subunit-like syc1097_d 11d43e82009d43e38463a563c2b33af7 521 SUPERFAMILY SSF56059 168 401 4.59E-9 T 11-10-2018 syc0795_c e6204b9dbbd6dcff88748f2ccaf11c82 103 Gene3D G3DSA:2.40.10.180 2 103 1.7E-6 T 11-10-2018 syc2106_d e72644d160b35a7301a56f4f041be038 220 Pfam PF01169 Uncharacterized protein family UPF0016 137 210 6.8E-23 T 11-10-2018 IPR001727 Gdt1 family syc2106_d e72644d160b35a7301a56f4f041be038 220 Pfam PF01169 Uncharacterized protein family UPF0016 21 92 2.3E-22 T 11-10-2018 IPR001727 Gdt1 family syc2106_d e72644d160b35a7301a56f4f041be038 220 ProSitePatterns PS01214 Uncharacterized protein family UPF0016 signature. 28 37 - T 11-10-2018 IPR001727 Gdt1 family syc1538_d 32f0eca523458035789ac261fa732368 105 Pfam PF08855 Domain of unknown function (DUF1825) 1 103 3.5E-51 T 11-10-2018 IPR014954 Protein of unknown function DUF1825 syc2451_d faaa043cad60c3db148bb2526e33d8c1 535 Pfam PF04966 Carbohydrate-selective porin, OprB family 118 535 5.0E-37 T 11-10-2018 IPR007049 Carbohydrate-selective porin OprB GO:0008643|GO:0015288|GO:0016021 syc2451_d faaa043cad60c3db148bb2526e33d8c1 535 Pfam PF00395 S-layer homology domain 59 101 2.0E-6 T 11-10-2018 IPR001119 S-layer homology domain syc1860_d a0e3d9fa0f5be6bdca708b70ee07ea0f 479 SUPERFAMILY SSF103473 22 475 1.07E-68 T 11-10-2018 IPR036259 MFS transporter superfamily syc1860_d a0e3d9fa0f5be6bdca708b70ee07ea0f 479 Pfam PF00083 Sugar (and other) transporter 39 475 1.4E-53 T 11-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 syc2445_c e5f8d9d2b3eb6f8cc64a2c03c2305b00 183 Pfam PF05991 YacP-like NYN domain 11 181 3.4E-54 T 11-10-2018 IPR010298 Protein of unknown function DUF901 syc1160_c 4992ed8ed148f2876db4ee49851bb15c 324 Pfam PF01758 Sodium Bile acid symporter family 42 220 9.2E-44 T 11-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 syc1160_c 4992ed8ed148f2876db4ee49851bb15c 324 Gene3D G3DSA:1.20.1530.20 5 315 2.8E-98 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily syc1527_c 049160da6c16903c577696eb7e5e0b9e 210 Pfam PF11866 Protein of unknown function (DUF3386) 4 209 1.1E-85 T 11-10-2018 IPR021809 Protein of unknown function DUF3386 syc0869_d eeb29e8b6de44652f9348fd3b3e00d20 501 Pfam PF13307 Helicase C-terminal domain 374 477 3.4E-6 T 11-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 syc1762_c c271073e0c31feb424516c5e503f4e65 293 Pfam PF02361 Cobalt transport protein 17 262 1.8E-59 T 11-10-2018 IPR003339 ABC/ECF transporter, transmembrane component syc2010_c 918a6ae3d56ca49b3e6cdcb4c6602977 223 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 5 207 8.4E-40 T 11-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 syc2010_c 918a6ae3d56ca49b3e6cdcb4c6602977 223 Pfam PF01914 MarC family integral membrane protein 6 209 1.7E-45 T 11-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 syc1208_c 5462681a53b0efe041a2d50ce1169831 215 Pfam PF05019 Coenzyme Q (ubiquinone) biosynthesis protein Coq4 41 213 2.1E-20 T 11-10-2018 IPR007715 Ubiquinone biosynthesis protein Coq4 GO:0006744 syc2121_d 4b6f350e08f32fca80b4caef49ae0b10 117 Pfam PF06305 Lipopolysaccharide assembly protein A domain 22 85 9.3E-15 T 11-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 syc1371_c 7751fd8c2c0a708430d0ffd8dc59984c 397 Pfam PF04932 O-Antigen ligase 163 310 5.2E-13 T 11-10-2018 IPR007016 O-antigen ligase-related syc2060_d 2850e473d86a5c8440cd269d64dc81f6 121 SUPERFAMILY SSF55961 2 90 1.95E-7 T 11-10-2018 syc2460_c 0152719366bfbcf7bba0ec915e9d46bb 111 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 3 106 7.1E-26 T 11-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like syc2399_c 3b1ffb95d08621fa400f118ccf0a737f 183 Pfam PF04143 Sulphur transport 12 163 1.4E-28 T 11-10-2018 IPR007272 Sulphur transport domain syc0552_c 94f4ebceb22ffa0436fa1898aad751b1 665 SUPERFAMILY SSF52540 317 568 3.93E-6 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase syc1134_c 5af86984f8982bb94a64f7a5f0362f09 347 Pfam PF11285 Protein of unknown function (DUF3086) 71 341 1.5E-125 T 11-10-2018 IPR021437 Protein of unknown function DUF3086 syc0041_c 51fec075a825f384f2a37972e70908f1 492 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 6 474 2.3E-196 T 11-10-2018 IPR003846 Uncharacterised protein family UPF0061 syc0041_c 51fec075a825f384f2a37972e70908f1 492 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 8 491 42.085 T 11-10-2018 IPR003846 Uncharacterised protein family UPF0061 syc0265_c df0ae49ba8cfa01818c270a3925b126a 168 Pfam PF14024 Protein of unknown function (DUF4240) 1 122 1.6E-35 T 11-10-2018 IPR025334 Domain of unknown function (DUF4240 syc0344_c 23db66cc47b24ae003d511da13c74374 91 Pfam PF10047 Protein of unknown function (DUF2281) 20 82 4.5E-16 T 11-10-2018 IPR018739 Domain of unknown function DUF2281 syc0933_c 9386f5cd9cf69a9b736baec11149763a 115 Pfam PF01169 Uncharacterized protein family UPF0016 29 103 1.8E-20 T 11-10-2018 IPR001727 Gdt1 family syc0910_d 7c7dc6826719fe599605ed29a45dcaf7 559 Pfam PF11832 Protein of unknown function (DUF3352) 11 546 8.5E-155 T 11-10-2018 IPR021787 Protein of unknown function DUF3352 syc1275_d beb3fcb5e3f5a3bea20d2aa7b224f349 393 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 7 217 2.1E-51 T 11-10-2018 IPR039447 Urease accessory protein UreH-like, transmembrane domain syc1275_d beb3fcb5e3f5a3bea20d2aa7b224f349 393 Pfam PF01794 Ferric reductase like transmembrane component 232 343 2.2E-7 T 11-10-2018 IPR013130 Ferric reductase transmembrane component-like domain syc1157_d 1c5e906f524eb07bc8945134e57cdaa3 74 Pfam PF05421 Protein of unknown function (DUF751) 4 63 1.4E-25 T 11-10-2018 IPR008470 Uncharacterised protein family Ycf33 syc1667_c 59be8d9069f5b788f2e3cbf05e6ee85f 331 Pfam PF00487 Fatty acid desaturase 47 260 5.4E-32 T 11-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 syc1417_d 7bc9f215dbae9588af0716e7604c67a1 503 Pfam PF02163 Peptidase family M50 385 430 9.5E-7 T 11-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 syc0934_c 466d5a91529442a70c3f23fdfceab4c2 121 Pfam PF03692 Putative zinc- or iron-chelating domain 6 80 1.3E-12 T 11-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein syc0340_d 61d7a68e28e7aab30b5b23c91dfe789c 82 Pfam PF13711 Domain of unknown function (DUF4160) 9 76 5.1E-16 T 11-10-2018 IPR025427 Protein of unknown function DUF4160 syc0212_c b34a7bf0767c88d462c202a61d7b45a6 321 Pfam PF01594 AI-2E family transporter 2 299 2.3E-51 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like syc1859_d fc2ab2cf5499a977b8173038b62a42fa 171 Pfam PF09626 Dihaem cytochrome c 57 160 4.7E-27 T 11-10-2018 IPR018588 Dihaem cytochrome c syc0690_d 647ee47df9c6da6725be880a832c935c 66 Pfam PF10929 Protein of unknown function (DUF2811) 6 62 1.1E-29 T 11-10-2018 IPR021231 Protein of unknown function DUF2811 syc0743_d aebf3e7171a9bbd7f425af4d1bb88175 257 Pfam PF04012 PspA/IM30 family 2 216 7.6E-65 T 11-10-2018 IPR007157 PspA/IM30 syc2514_c 32e8be6ebc6bbe386d42e7b9078130d8 109 Pfam PF10693 Protein of unknown function (DUF2499) 3 90 9.5E-38 T 11-10-2018 IPR019634 Uncharacterised protein family Ycf49 syc1326_c c8cad93f316f99db7b746d3ec54e7729 363 Pfam PF01384 Phosphate transporter family 30 348 4.9E-59 T 11-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652