Synpcc7942_0001	SM00480	DNA polymerase III beta subunit
Synpcc7942_0015	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
Synpcc7942_0039	SM01350	Synpcc7942_0039
Synpcc7942_0040	SM00905	Dihydroneopterin aldolase
Synpcc7942_0045	SM00028	Tetratricopeptide repeats
Synpcc7942_0047	SM00028	Tetratricopeptide repeats
Synpcc7942_0051	SM00028	Tetratricopeptide repeats
Synpcc7942_0063	SM00195	Dual specificity phosphatase, catalytic domain
Synpcc7942_0068	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_0075	SM01011	Aminopeptidase P, N-terminal domain
Synpcc7942_0076	SM00062	Bacterial periplasmic substrate-binding proteins
Synpcc7942_0076	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
Synpcc7942_0077	SM00530	Helix-turn-helix XRE-family like proteins 
Synpcc7942_0081	SM00363	S4 RNA-binding domain
Synpcc7942_0082	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_0086	SM00642	Alpha-amylase domain
Synpcc7942_0088	SM00849	Metallo-beta-lactamase superfamily
Synpcc7942_0090	SM00345	helix_turn_helix gluconate operon transcriptional repressor
Synpcc7942_0095	SM00448	cheY-homologous receiver domain
Synpcc7942_0095	SM00862	Transcriptional regulatory protein, C terminal
Synpcc7942_0103	SM00248	ankyrin repeats
Synpcc7942_0108	SM00470	ParB-like nuclease domain
Synpcc7942_0110	SM00530	Helix-turn-helix XRE-family like proteins 
Synpcc7942_0118	SM00845	GatB domain
Synpcc7942_0122	SM00052	Putative diguanylate phosphodiesterase
Synpcc7942_0127	SM00100	Cyclic nucleotide-monophosphate binding domain
Synpcc7942_0127	SM00419	helix_turn_helix, cAMP Regulatory protein
Synpcc7942_0129	SM00732	Likely ribonuclease with RNase H fold.
Synpcc7942_0131	SM00100	Cyclic nucleotide-monophosphate binding domain
Synpcc7942_0143	SM00861	Transketolase, pyrimidine binding domain
Synpcc7942_0151	SM00267	diguanylate cyclase
Synpcc7942_0151	SM00448	cheY-homologous receiver domain
Synpcc7942_0158	SM00450	Rhodanese Homology Domain
Synpcc7942_0159	SM00232	JAB/MPN domain
Synpcc7942_0169	SM01230	Synpcc7942_0169
Synpcc7942_0178	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_0181	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_0188	SM00052	Putative diguanylate phosphodiesterase
Synpcc7942_0188	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Synpcc7942_0188	SM00091	PAS domain
Synpcc7942_0188	SM00267	diguanylate cyclase
Synpcc7942_0194	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
Synpcc7942_0194	SM00474	3'-5' exonuclease
Synpcc7942_0194	SM00475	5'-3' exonuclease
Synpcc7942_0194	SM00482	DNA polymerase A domain
Synpcc7942_0208	SM00028	Tetratricopeptide repeats
Synpcc7942_0216	SM00829	Enoylreductase
Synpcc7942_0235	SM00100	Cyclic nucleotide-monophosphate binding domain
Synpcc7942_0236	SM00100	Cyclic nucleotide-monophosphate binding domain
Synpcc7942_0245	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
Synpcc7942_0246	SM00062	Bacterial periplasmic substrate-binding proteins
Synpcc7942_0249	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_0251	SM00479	Synpcc7942_0251
Synpcc7942_0252	SM01093	Synpcc7942_0252
Synpcc7942_0254	SM00434	DNA Topoisomerase IV
Synpcc7942_0255	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_0260	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_0260	SM01086	C-terminal, D2-small domain, of ClpB protein
Synpcc7942_0266	SM00271	DnaJ molecular chaperone homology domain
Synpcc7942_0270	SM00028	Tetratricopeptide repeats
Synpcc7942_0277	SM00278	Helix-hairpin-helix DNA-binding motif class 1
Synpcc7942_0277	SM00292	breast cancer carboxy-terminal domain
Synpcc7942_0277	SM00532	Ligase N family
Synpcc7942_0279	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
Synpcc7942_0280	SM00852	Probable molybdopterin binding domain
Synpcc7942_0284	SM00877	Synpcc7942_0284
Synpcc7942_0285	SM00877	Synpcc7942_0285
Synpcc7942_0289	SM00957	SecA DEAD-like domain
Synpcc7942_0289	SM00958	SecA preprotein cross-linking domain
Synpcc7942_0297	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_0302	SM00155	Phospholipase D. Active site motifs.
Synpcc7942_0311	SM00650	Ribosomal RNA adenine dimethylases
Synpcc7942_0315	SM00998	Adenylosuccinate lyase C-terminus
Synpcc7942_0319	SM00363	S4 RNA-binding domain
Synpcc7942_0321	SM00938	Nitrogen regulatory protein P-II
Synpcc7942_0325	SM01094	CpcD/allophycocyanin linker domain
Synpcc7942_0348	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_0350	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_0360	SM00897	FIST N domain
Synpcc7942_0360	SM01204	Synpcc7942_0360
Synpcc7942_0361	SM01093	Synpcc7942_0361
Synpcc7942_0392	SM00925	MltA specific insert domain
Synpcc7942_0396	SM00798	AICARFT/IMPCHase bienzyme
Synpcc7942_0396	SM00851	MGS-like domain
Synpcc7942_0404	SM00937	Synpcc7942_0404
Synpcc7942_0417	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_0419	SM00729	Elongator protein 3, MiaB family, Radical SAM
Synpcc7942_0419	SM00876	Biotin and Thiamin Synthesis associated domain
Synpcc7942_0427	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_0428	SM00917	LeuA allosteric (dimerisation) domain
Synpcc7942_0430	SM00861	Transketolase, pyrimidine binding domain
Synpcc7942_0441	SM01001	AIR carboxylase
Synpcc7942_0447	SM00478	endonuclease III
Synpcc7942_0447	SM00525	Synpcc7942_0447
Synpcc7942_0453	SM00387	Histidine kinase-like ATPases
Synpcc7942_0453	SM00388	His Kinase A (phosphoacceptor) domain
Synpcc7942_0463	SM00226	Low molecular weight phosphatase family
Synpcc7942_0467	SM00235	Zinc-dependent metalloprotease
Synpcc7942_0479	SM00838	Elongation factor G C-terminus
Synpcc7942_0480	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
Synpcc7942_0480	SM00387	Histidine kinase-like ATPases
Synpcc7942_0480	SM00388	His Kinase A (phosphoacceptor) domain
Synpcc7942_0485	SM00855	Phosphoglycerate mutase family
Synpcc7942_0490	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Synpcc7942_0490	SM00091	PAS domain
Synpcc7942_0490	SM00267	diguanylate cyclase
Synpcc7942_0492	SM00904	Riboflavin kinase
Synpcc7942_0513	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_0516	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
Synpcc7942_0516	SM00245	tail specific protease
Synpcc7942_0520	SM00877	Synpcc7942_0520
Synpcc7942_0531	SM00028	Tetratricopeptide repeats
Synpcc7942_0536	SM00823	Phosphopantetheine attachment site
Synpcc7942_0537	SM00825	Beta-ketoacyl synthase
Synpcc7942_0538	SM00861	Transketolase, pyrimidine binding domain
Synpcc7942_0542	SM00729	Elongator protein 3, MiaB family, Radical SAM
Synpcc7942_0556	SM00448	cheY-homologous receiver domain
Synpcc7942_0556	SM00862	Transcriptional regulatory protein, C terminal
Synpcc7942_0560	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_0563	SM00487	DEAD-like helicases superfamily
Synpcc7942_0563	SM00490	helicase superfamily c-terminal domain
Synpcc7942_0564	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_0565	SM00240	Forkhead associated domain
Synpcc7942_0583	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_0585	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
Synpcc7942_0594	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
Synpcc7942_0598	SM00257	Lysin motif
Synpcc7942_0600	SM00220	Serine/Threonine protein kinases, catalytic domain
Synpcc7942_0611	SM00463	Small MutS-related domain
Synpcc7942_0611	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
Synpcc7942_0611	SM00534	ATPase domain of DNA mismatch repair MUTS family
Synpcc7942_0613	SM00855	Phosphoglycerate mutase family
Synpcc7942_0615	SM00450	Rhodanese Homology Domain
Synpcc7942_0618	SM00996	S-adenosyl-L-homocysteine hydrolase
Synpcc7942_0618	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
Synpcc7942_0622	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_0625	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_0625	SM00393	Putative single-stranded nucleic acids-binding domain
Synpcc7942_0634	SM00649	Ribosomal protein L11/L12
Synpcc7942_0635	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
Synpcc7942_0635	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
Synpcc7942_0637	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_0637	SM01086	C-terminal, D2-small domain, of ClpB protein
Synpcc7942_0639	SM01192	Synpcc7942_0639
Synpcc7942_0639	SM01193	Synpcc7942_0639
Synpcc7942_0640	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_0644	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
Synpcc7942_0644	SM00387	Histidine kinase-like ATPases
Synpcc7942_0644	SM00388	His Kinase A (phosphoacceptor) domain
Synpcc7942_0644	SM00448	cheY-homologous receiver domain
Synpcc7942_0651	SM00487	DEAD-like helicases superfamily
Synpcc7942_0651	SM00490	helicase superfamily c-terminal domain
Synpcc7942_0663	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
Synpcc7942_0663	SM01080	Synpcc7942_0663
Synpcc7942_0664	SM00100	Cyclic nucleotide-monophosphate binding domain
Synpcc7942_0666	SM00271	DnaJ molecular chaperone homology domain
Synpcc7942_0673	SM00478	endonuclease III
Synpcc7942_0673	SM00525	Synpcc7942_0673
Synpcc7942_0678	SM00474	3'-5' exonuclease
Synpcc7942_0679	SM00360	RNA recognition motif
Synpcc7942_0684	SM00822	Synpcc7942_0684
Synpcc7942_0688	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
Synpcc7942_0694	SM00316	Ribosomal protein S1-like RNA-binding domain
Synpcc7942_0711	SM00851	MGS-like domain
Synpcc7942_0711	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
Synpcc7942_0712	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
Synpcc7942_0712	SM00245	tail specific protease
Synpcc7942_0714	SM00287	Bacterial SH3 domain homologues
Synpcc7942_0714	SM00646	Synpcc7942_0714
Synpcc7942_0725	SM00487	DEAD-like helicases superfamily
Synpcc7942_0725	SM00490	helicase superfamily c-terminal domain
Synpcc7942_0726	SM00990	Synpcc7942_0726
Synpcc7942_0727	SM00778	Zinc-binding domain of primase-helicase
Synpcc7942_0763	SM00530	Helix-turn-helix XRE-family like proteins 
Synpcc7942_0764	SM00530	Helix-turn-helix XRE-family like proteins 
Synpcc7942_0779	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
Synpcc7942_0780	SM00220	Serine/Threonine protein kinases, catalytic domain
Synpcc7942_0782	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_0790	SM00360	RNA recognition motif
Synpcc7942_0799	SM00729	Elongator protein 3, MiaB family, Radical SAM
Synpcc7942_0812	SM00028	Tetratricopeptide repeats
Synpcc7942_0812	SM00271	DnaJ molecular chaperone homology domain
Synpcc7942_0815	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_0816	SM00052	Putative diguanylate phosphodiesterase
Synpcc7942_0816	SM00267	diguanylate cyclase
Synpcc7942_0819	SM01211	Synpcc7942_0819
Synpcc7942_0827	SM00833	Cobalamin synthesis protein cobW C-terminal domain
Synpcc7942_0831	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
Synpcc7942_0835	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_0838	SM00729	Elongator protein 3, MiaB family, Radical SAM
Synpcc7942_0844	SM00481	DNA polymerase alpha chain like domain
Synpcc7942_0847	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_0848	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_0855	SM00448	cheY-homologous receiver domain
Synpcc7942_0856	SM00448	cheY-homologous receiver domain
Synpcc7942_0857	SM00260	Two component signalling adaptor domain
Synpcc7942_0858	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
Synpcc7942_0858	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Synpcc7942_0858	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Synpcc7942_0859	SM00073	Histidine Phosphotransfer domain
Synpcc7942_0859	SM00260	Two component signalling adaptor domain
Synpcc7942_0859	SM00387	Histidine kinase-like ATPases
Synpcc7942_0859	SM00448	cheY-homologous receiver domain
Synpcc7942_0859	SM01231	Synpcc7942_0859
Synpcc7942_0860	SM00260	Two component signalling adaptor domain
Synpcc7942_0874	SM00487	DEAD-like helicases superfamily
Synpcc7942_0874	SM00490	helicase superfamily c-terminal domain
Synpcc7942_0876	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
Synpcc7942_0877	SM00729	Elongator protein 3, MiaB family, Radical SAM
Synpcc7942_0878	SM00316	Ribosomal protein S1-like RNA-binding domain
Synpcc7942_0882	SM00464	Found in ATP-dependent protease La (LON)
Synpcc7942_0883	SM01403	Synpcc7942_0883
Synpcc7942_0885	SM00838	Elongation factor G C-terminus
Synpcc7942_0885	SM00889	Elongation factor G, domain IV
Synpcc7942_0892	SM00729	Elongator protein 3, MiaB family, Radical SAM
Synpcc7942_0912	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_0917	SM00930	Synpcc7942_0917
Synpcc7942_0924	SM00091	PAS domain
Synpcc7942_0924	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Synpcc7942_0924	SM00387	Histidine kinase-like ATPases
Synpcc7942_0924	SM00388	His Kinase A (phosphoacceptor) domain
Synpcc7942_0925	SM01209	Synpcc7942_0925
Synpcc7942_0925	SM01210	Synpcc7942_0925
Synpcc7942_0936	SM00450	Rhodanese Homology Domain
Synpcc7942_0937	SM00849	Metallo-beta-lactamase superfamily
Synpcc7942_0938	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
Synpcc7942_0940	SM00530	Helix-turn-helix XRE-family like proteins 
Synpcc7942_0941	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_0942	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_0947	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_0956	SM00833	Cobalamin synthesis protein cobW C-terminal domain
Synpcc7942_0960	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_0971	SM00959	Rho termination factor, N-terminal domain
Synpcc7942_0973	SM00984	UDP binding domain
Synpcc7942_0976	SM00116	Domain in cystathionine beta-synthase and other proteins.
Synpcc7942_0978	SM01094	CpcD/allophycocyanin linker domain
Synpcc7942_0983	SM01133	Synpcc7942_0983
Synpcc7942_0998	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_1006	SM00028	Tetratricopeptide repeats
Synpcc7942_1009	SM00530	Helix-turn-helix XRE-family like proteins 
Synpcc7942_1010	SM00363	S4 RNA-binding domain
Synpcc7942_1011	SM00091	PAS domain
Synpcc7942_1011	SM00387	Histidine kinase-like ATPases
Synpcc7942_1011	SM00388	His Kinase A (phosphoacceptor) domain
Synpcc7942_1012	SM00448	cheY-homologous receiver domain
Synpcc7942_1012	SM00862	Transcriptional regulatory protein, C terminal
Synpcc7942_1014	SM00073	Histidine Phosphotransfer domain
Synpcc7942_1014	SM00260	Two component signalling adaptor domain
Synpcc7942_1014	SM00387	Histidine kinase-like ATPases
Synpcc7942_1014	SM00448	cheY-homologous receiver domain
Synpcc7942_1014	SM01231	Synpcc7942_1014
Synpcc7942_1015	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Synpcc7942_1015	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Synpcc7942_1016	SM00260	Two component signalling adaptor domain
Synpcc7942_1020	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
Synpcc7942_1025	SM00028	Tetratricopeptide repeats
Synpcc7942_1034	SM00460	Transglutaminase/protease-like homologues
Synpcc7942_1049	SM01094	CpcD/allophycocyanin linker domain
Synpcc7942_1050	SM01094	CpcD/allophycocyanin linker domain
Synpcc7942_1051	SM01094	CpcD/allophycocyanin linker domain
Synpcc7942_1054	SM00567	E-Z type HEAT repeats
Synpcc7942_1055	SM00567	E-Z type HEAT repeats
Synpcc7942_1056	SM00530	Helix-turn-helix XRE-family like proteins 
Synpcc7942_1065	SM00487	DEAD-like helicases superfamily
Synpcc7942_1079	SM00487	DEAD-like helicases superfamily
Synpcc7942_1079	SM00490	helicase superfamily c-terminal domain
Synpcc7942_1082	SM00831	Cation transporter/ATPase, N-terminus
Synpcc7942_1085	SM00642	Alpha-amylase domain
Synpcc7942_1089	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_1089	SM01086	C-terminal, D2-small domain, of ClpB protein
Synpcc7942_1100	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_1100	SM00760	Bacterial dnaA protein helix-turn-helix domain
Synpcc7942_1101	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
Synpcc7942_1107	SM00028	Tetratricopeptide repeats
Synpcc7942_1108	SM00411	bacterial (prokaryotic) histone like domain
Synpcc7942_1110	SM00448	cheY-homologous receiver domain
Synpcc7942_1111	SM00220	Serine/Threonine protein kinases, catalytic domain
Synpcc7942_1112	SM00363	S4 RNA-binding domain
Synpcc7942_1124	SM00955	Synpcc7942_1124
Synpcc7942_1125	SM00073	Histidine Phosphotransfer domain
Synpcc7942_1130	SM00331	Sigma factor PP2C-like phosphatases
Synpcc7942_1130	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
Synpcc7942_1133	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_1136	SM00567	E-Z type HEAT repeats
Synpcc7942_1148	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
Synpcc7942_1148	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
Synpcc7942_1158	SM00052	Putative diguanylate phosphodiesterase
Synpcc7942_1158	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
Synpcc7942_1158	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Synpcc7942_1158	SM00091	PAS domain
Synpcc7942_1158	SM00267	diguanylate cyclase
Synpcc7942_1159	SM00347	helix_turn_helix multiple antibiotic resistance protein
Synpcc7942_1166	SM00857	Resolvase, N terminal domain
Synpcc7942_1168	SM01001	AIR carboxylase
Synpcc7942_1191	SM00072	Guanylate kinase homologues.
Synpcc7942_1193	SM00563	Phosphate acyltransferases
Synpcc7942_1199	SM00967	RNA 2'-O ribose methyltransferase substrate binding
Synpcc7942_1217	SM01248	Synpcc7942_1217
Synpcc7942_1218	SM01247	Synpcc7942_1218
Synpcc7942_1221	SM00448	cheY-homologous receiver domain
Synpcc7942_1227	SM00278	Helix-hairpin-helix DNA-binding motif class 1
Synpcc7942_1235	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
Synpcc7942_1236	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_1237	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_1243	SM00100	Cyclic nucleotide-monophosphate binding domain
Synpcc7942_1244	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_1254	SM00100	Cyclic nucleotide-monophosphate binding domain
Synpcc7942_1263	SM00981	Synpcc7942_1263
Synpcc7942_1269	SM00116	Domain in cystathionine beta-synthase and other proteins.
Synpcc7942_1269	SM00924	MgtE intracellular N domain
Synpcc7942_1274	SM00028	Tetratricopeptide repeats
Synpcc7942_1276	SM00062	Bacterial periplasmic substrate-binding proteins
Synpcc7942_1282	SM00729	Elongator protein 3, MiaB family, Radical SAM
Synpcc7942_1285	SM00852	Probable molybdopterin binding domain
Synpcc7942_1286	SM00852	Probable molybdopterin binding domain
Synpcc7942_1291	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
Synpcc7942_1292	SM00400	zinc finger
Synpcc7942_1292	SM00493	Synpcc7942_1292
Synpcc7942_1293	SM00873	B3/4 domain
Synpcc7942_1293	SM00874	tRNA synthetase B5 domain
Synpcc7942_1293	SM00896	Ferredoxin-fold anticodon binding domain
Synpcc7942_1294	SM00220	Serine/Threonine protein kinases, catalytic domain
Synpcc7942_1295	SM00563	Phosphate acyltransferases
Synpcc7942_1297	SM00919	Malic enzyme, NAD binding domain
Synpcc7942_1297	SM01274	Synpcc7942_1297
Synpcc7942_1298	SM00267	diguanylate cyclase
Synpcc7942_1301	SM00487	DEAD-like helicases superfamily
Synpcc7942_1301	SM00490	helicase superfamily c-terminal domain
Synpcc7942_1305	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_1312	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_1314	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_1317	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_1320	SM00880	Synpcc7942_1320
Synpcc7942_1323	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
Synpcc7942_1323	SM01232	Synpcc7942_1323
Synpcc7942_1324	SM00487	DEAD-like helicases superfamily
Synpcc7942_1324	SM00490	helicase superfamily c-terminal domain
Synpcc7942_1324	SM01142	Synpcc7942_1324
Synpcc7942_1325	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_1326	SM00487	DEAD-like helicases superfamily
Synpcc7942_1326	SM00490	helicase superfamily c-terminal domain
Synpcc7942_1326	SM00982	Synpcc7942_1326
Synpcc7942_1326	SM01058	CarD-like/TRCF domain
Synpcc7942_1337	SM00191	Integrin alpha (beta-propellor repeats).
Synpcc7942_1355	SM00052	Putative diguanylate phosphodiesterase
Synpcc7942_1355	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Synpcc7942_1355	SM00091	PAS domain
Synpcc7942_1355	SM00267	diguanylate cyclase
Synpcc7942_1355	SM00448	cheY-homologous receiver domain
Synpcc7942_1356	SM00448	cheY-homologous receiver domain
Synpcc7942_1357	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
Synpcc7942_1357	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Synpcc7942_1357	SM00091	PAS domain
Synpcc7942_1357	SM00387	Histidine kinase-like ATPases
Synpcc7942_1357	SM00388	His Kinase A (phosphoacceptor) domain
Synpcc7942_1369	SM00493	Synpcc7942_1369
Synpcc7942_1372	SM01018	B12 binding domain
Synpcc7942_1377	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
Synpcc7942_1377	SM00954	Region found in RelA / SpoT proteins
Synpcc7942_1379	SM00878	Biotin carboxylase C-terminal domain
Synpcc7942_1381	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_1382	SM00052	Putative diguanylate phosphodiesterase
Synpcc7942_1382	SM00091	PAS domain
Synpcc7942_1382	SM00267	diguanylate cyclase
Synpcc7942_1388	SM01057	Eukaryotic-type carbonic anhydrase
Synpcc7942_1391	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_1394	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
Synpcc7942_1400	SM00633	Glycosyl hydrolase family 10
Synpcc7942_1403	SM00849	Metallo-beta-lactamase superfamily
Synpcc7942_1404	SM00448	cheY-homologous receiver domain
Synpcc7942_1404	SM00862	Transcriptional regulatory protein, C terminal
Synpcc7942_1406	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_1410	SM00917	LeuA allosteric (dimerisation) domain
Synpcc7942_1414	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_1416	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
Synpcc7942_1416	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
Synpcc7942_1416	SM00493	Synpcc7942_1416
Synpcc7942_1421	SM00877	Synpcc7942_1421
Synpcc7942_1423	SM00961	Ribulose bisphosphate carboxylase, small chain
Synpcc7942_1425	SM00877	Synpcc7942_1425
Synpcc7942_1427	SM00961	Ribulose bisphosphate carboxylase, small chain
Synpcc7942_1433	SM00859	Semialdehyde dehydrogenase, NAD binding domain
Synpcc7942_1447	SM00947	Carbonic anhydrase
Synpcc7942_1450	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_1452	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_1453	SM00448	cheY-homologous receiver domain
Synpcc7942_1453	SM00862	Transcriptional regulatory protein, C terminal
Synpcc7942_1456	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
Synpcc7942_1457	SM00563	Phosphate acyltransferases
Synpcc7942_1467	SM00271	DnaJ molecular chaperone homology domain
Synpcc7942_1486	SM01234	Synpcc7942_1486
Synpcc7942_1487	SM00363	S4 RNA-binding domain
Synpcc7942_1487	SM01390	Synpcc7942_1487
Synpcc7942_1490	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_1491	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_1503	SM00363	S4 RNA-binding domain
Synpcc7942_1505	SM01329	Synpcc7942_1505
Synpcc7942_1507	SM00729	Elongator protein 3, MiaB family, Radical SAM
Synpcc7942_1515	SM00331	Sigma factor PP2C-like phosphatases
Synpcc7942_1515	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
Synpcc7942_1516	SM00855	Phosphoglycerate mutase family
Synpcc7942_1517	SM00388	His Kinase A (phosphoacceptor) domain
Synpcc7942_1523	SM00663	RNA polymerase I subunit A N-terminus
Synpcc7942_1534	SM00950	Synpcc7942_1534
Synpcc7942_1546	SM00955	Synpcc7942_1546
Synpcc7942_1553	SM00481	DNA polymerase alpha chain like domain
Synpcc7942_1577	SM00836	DALR anticodon binding domain
Synpcc7942_1577	SM01016	Arginyl tRNA synthetase N terminal dom
Synpcc7942_1579	SM00404	Protein tyrosine phosphatase, catalytic domain motif
Synpcc7942_1581	SM00631	Synpcc7942_1581
Synpcc7942_1585	SM00644	Synpcc7942_1585
Synpcc7942_1586	SM00387	Histidine kinase-like ATPases
Synpcc7942_1586	SM00388	His Kinase A (phosphoacceptor) domain
Synpcc7942_1588	SM00116	Domain in cystathionine beta-synthase and other proteins.
Synpcc7942_1591	SM00316	Ribosomal protein S1-like RNA-binding domain
Synpcc7942_1606	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
Synpcc7942_1609	SM00306	Hint (Hedgehog/Intein) domain N-terminal region
Synpcc7942_1612	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
Synpcc7942_1612	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
Synpcc7942_1618	SM00393	Putative single-stranded nucleic acids-binding domain
Synpcc7942_1620	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_1621	SM00729	Elongator protein 3, MiaB family, Radical SAM
Synpcc7942_1631	SM00028	Tetratricopeptide repeats
Synpcc7942_1639	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_1643	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
Synpcc7942_1643	SM00267	diguanylate cyclase
Synpcc7942_1645	SM00358	Double-stranded RNA binding motif
Synpcc7942_1645	SM00535	Ribonuclease III family
Synpcc7942_1652	SM00729	Elongator protein 3, MiaB family, Radical SAM
Synpcc7942_1662	SM00840	Synpcc7942_1662
Synpcc7942_1680	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_1683	SM00930	Synpcc7942_1683
Synpcc7942_1684	SM00419	helix_turn_helix, cAMP Regulatory protein
Synpcc7942_1689	SM00450	Rhodanese Homology Domain
Synpcc7942_1693	SM00448	cheY-homologous receiver domain
Synpcc7942_1694	SM00434	DNA Topoisomerase IV
Synpcc7942_1697	SM00704	CDGSH-type zinc finger. Function unknown.
Synpcc7942_1703	SM00872	Alpha mannosidase, middle domain
Synpcc7942_1716	SM00052	Putative diguanylate phosphodiesterase
Synpcc7942_1716	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Synpcc7942_1716	SM00091	PAS domain
Synpcc7942_1716	SM00267	diguanylate cyclase
Synpcc7942_1719	SM01329	Synpcc7942_1719
Synpcc7942_1721	SM00567	E-Z type HEAT repeats
Synpcc7942_1725	SM00345	helix_turn_helix gluconate operon transcriptional repressor
Synpcc7942_1736	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_1739	SM00422	helix_turn_helix, mercury resistance
Synpcc7942_1742	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
Synpcc7942_1752	SM00185	Armadillo/beta-catenin-like repeats
Synpcc7942_1752	SM00567	E-Z type HEAT repeats
Synpcc7942_1760	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
Synpcc7942_1760	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
Synpcc7942_1771	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_1771	SM00962	SRP54-type protein, GTPase domain
Synpcc7942_1771	SM00963	SRP54-type protein, helical bundle domain
Synpcc7942_1780	SM00853	MutL C terminal dimerisation domain
Synpcc7942_1780	SM01340	Synpcc7942_1780
Synpcc7942_1789	SM00271	DnaJ molecular chaperone homology domain
Synpcc7942_1792	SM01004	Delta-aminolevulinic acid dehydratase
Synpcc7942_1809	SM00849	Metallo-beta-lactamase superfamily
Synpcc7942_1809	SM00903	Flavin reductase like domain
Synpcc7942_1810	SM00849	Metallo-beta-lactamase superfamily
Synpcc7942_1810	SM00903	Flavin reductase like domain
Synpcc7942_1811	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Synpcc7942_1811	SM00091	PAS domain
Synpcc7942_1811	SM00267	diguanylate cyclase
Synpcc7942_1813	SM00387	Histidine kinase-like ATPases
Synpcc7942_1814	SM00100	Cyclic nucleotide-monophosphate binding domain
Synpcc7942_1815	SM00388	His Kinase A (phosphoacceptor) domain
Synpcc7942_1815	SM00448	cheY-homologous receiver domain
Synpcc7942_1816	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Synpcc7942_1816	SM00387	Histidine kinase-like ATPases
Synpcc7942_1816	SM00388	His Kinase A (phosphoacceptor) domain
Synpcc7942_1816	SM00448	cheY-homologous receiver domain
Synpcc7942_1817	SM00448	cheY-homologous receiver domain
Synpcc7942_1823	SM00567	E-Z type HEAT repeats
Synpcc7942_1824	SM00116	Domain in cystathionine beta-synthase and other proteins.
Synpcc7942_1831	SM01240	Synpcc7942_1831
Synpcc7942_1846	SM00849	Metallo-beta-lactamase superfamily
Synpcc7942_1847	SM01130	Synpcc7942_1847
Synpcc7942_1848	SM00859	Semialdehyde dehydrogenase, NAD binding domain
Synpcc7942_1859	SM00052	Putative diguanylate phosphodiesterase
Synpcc7942_1859	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Synpcc7942_1859	SM00091	PAS domain
Synpcc7942_1859	SM00267	diguanylate cyclase
Synpcc7942_1860	SM00421	helix_turn_helix, Lux Regulon
Synpcc7942_1860	SM00448	cheY-homologous receiver domain
Synpcc7942_1872	SM00387	Histidine kinase-like ATPases
Synpcc7942_1872	SM00388	His Kinase A (phosphoacceptor) domain
Synpcc7942_1873	SM00448	cheY-homologous receiver domain
Synpcc7942_1873	SM00862	Transcriptional regulatory protein, C terminal
Synpcc7942_1877	SM00460	Transglutaminase/protease-like homologues
Synpcc7942_1892	SM00450	Rhodanese Homology Domain
Synpcc7942_1893	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_1905	SM00100	Cyclic nucleotide-monophosphate binding domain
Synpcc7942_1905	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_1911	SM00316	Ribosomal protein S1-like RNA-binding domain
Synpcc7942_1911	SM00357	Cold shock protein domain
Synpcc7942_1911	SM00955	Synpcc7942_1911
Synpcc7942_1919	SM00530	Helix-turn-helix XRE-family like proteins 
Synpcc7942_1939	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
Synpcc7942_1945	SM00465	GIY-YIG type nucleases (URI domain)
Synpcc7942_1957	SM00100	Cyclic nucleotide-monophosphate binding domain
Synpcc7942_1972	SM00028	Tetratricopeptide repeats
Synpcc7942_1993	SM01007	Class II Aldolase and Adducin N-terminal domain
Synpcc7942_1998	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
Synpcc7942_1999	SM00360	RNA recognition motif
Synpcc7942_2000	SM00240	Forkhead associated domain
Synpcc7942_2003	SM00754	A domain in the BMP inhibitor chordin and in microbial proteins.
Synpcc7942_2008	SM00903	Flavin reductase like domain
Synpcc7942_2011	SM00849	Metallo-beta-lactamase superfamily
Synpcc7942_2022	SM00322	K homology RNA-binding domain
Synpcc7942_2038	SM00530	Helix-turn-helix XRE-family like proteins 
Synpcc7942_2045	SM00968	SMC proteins Flexible Hinge Domain
Synpcc7942_2057	SM01207	Synpcc7942_2057
Synpcc7942_2070	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_2071	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_2073	SM00842	Cell division protein FtsA
Synpcc7942_2074	SM00271	DnaJ molecular chaperone homology domain
Synpcc7942_2078	SM00855	Phosphoglycerate mutase family
Synpcc7942_2082	SM00838	Elongation factor G C-terminus
Synpcc7942_2082	SM00889	Elongation factor G, domain IV
Synpcc7942_2089	SM00756	Synpcc7942_2089
Synpcc7942_2094	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
Synpcc7942_2096	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
Synpcc7942_2096	SM00116	Domain in cystathionine beta-synthase and other proteins.
Synpcc7942_2096	SM00267	diguanylate cyclase
Synpcc7942_2104	SM01116	Synpcc7942_2104
Synpcc7942_2105	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_2109	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_2113	SM01400	Synpcc7942_2113
Synpcc7942_2114	SM00387	Histidine kinase-like ATPases
Synpcc7942_2114	SM00388	His Kinase A (phosphoacceptor) domain
Synpcc7942_2114	SM01248	Synpcc7942_2114
Synpcc7942_2119	SM00967	RNA 2'-O ribose methyltransferase substrate binding
Synpcc7942_2120	SM00535	Ribonuclease III family
Synpcc7942_2122	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
Synpcc7942_2129	SM00930	Synpcc7942_2129
Synpcc7942_2134	SM00646	Synpcc7942_2134
Synpcc7942_2144	SM00318	Staphylococcal nuclease homologues
Synpcc7942_2148	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_2156	SM01230	Synpcc7942_2156
Synpcc7942_2174	SM00419	helix_turn_helix, cAMP Regulatory protein
Synpcc7942_2179	SM00046	Diacylglycerol kinase catalytic domain (presumed)
Synpcc7942_2192	SM00267	diguanylate cyclase
Synpcc7942_2193	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
Synpcc7942_2193	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
Synpcc7942_2195	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
Synpcc7942_2195	SM01080	Synpcc7942_2195
Synpcc7942_2197	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
Synpcc7942_2198	SM00933	Synpcc7942_2198
Synpcc7942_2199	SM00306	Hint (Hedgehog/Intein) domain N-terminal region
Synpcc7942_2199	SM00481	DNA polymerase alpha chain like domain
Synpcc7942_2201	SM01005	Alanine racemase, C-terminal domain
Synpcc7942_2202	SM00507	HNH nucleases
Synpcc7942_2203	SM00937	Synpcc7942_2203
Synpcc7942_2209	SM00662	RNA polymerases D
Synpcc7942_2221	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
Synpcc7942_2222	SM01374	Synpcc7942_2222
Synpcc7942_2226	SM00322	K homology RNA-binding domain
Synpcc7942_2229	SM01382	Synpcc7942_2229
Synpcc7942_2229	SM01383	Synpcc7942_2229
Synpcc7942_2236	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_2242	SM00388	His Kinase A (phosphoacceptor) domain
Synpcc7942_2247	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
Synpcc7942_2247	SM00534	ATPase domain of DNA mismatch repair MUTS family
Synpcc7942_2248	SM00411	bacterial (prokaryotic) histone like domain
Synpcc7942_2264	SM00421	helix_turn_helix, Lux Regulon
Synpcc7942_2274	SM00327	von Willebrand factor (vWF) type A domain
Synpcc7942_2274	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_2280	SM00028	Tetratricopeptide repeats
Synpcc7942_2282	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
Synpcc7942_2282	SM00387	Histidine kinase-like ATPases
Synpcc7942_2282	SM00388	His Kinase A (phosphoacceptor) domain
Synpcc7942_2291	SM00116	Domain in cystathionine beta-synthase and other proteins.
Synpcc7942_2296	SM01230	Synpcc7942_2296
Synpcc7942_2298	SM00278	Helix-hairpin-helix DNA-binding motif class 1
Synpcc7942_2299	SM01387	Synpcc7942_2299
Synpcc7942_2305	SM00448	cheY-homologous receiver domain
Synpcc7942_2305	SM00862	Transcriptional regulatory protein, C terminal
Synpcc7942_2306	SM00271	DnaJ molecular chaperone homology domain
Synpcc7942_2314	SM00883	Chaperonin 10 Kd subunit
Synpcc7942_2315	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_2319	SM00530	Helix-turn-helix XRE-family like proteins 
Synpcc7942_2321	SM00028	Tetratricopeptide repeats
Synpcc7942_2325	SM00567	E-Z type HEAT repeats
Synpcc7942_2328	SM00028	Tetratricopeptide repeats
Synpcc7942_2329	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
Synpcc7942_2330	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
Synpcc7942_2330	SM00245	tail specific protease
Synpcc7942_2337	SM00644	Synpcc7942_2337
Synpcc7942_2340	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_2349	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_2356	SM00419	helix_turn_helix, cAMP Regulatory protein
Synpcc7942_2360	SM00646	Synpcc7942_2360
Synpcc7942_2373	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
Synpcc7942_2374	SM00729	Elongator protein 3, MiaB family, Radical SAM
Synpcc7942_2378	SM00864	Tubulin/FtsZ family, GTPase domain
Synpcc7942_2378	SM00865	Tubulin/FtsZ family, C-terminal domain
Synpcc7942_2382	SM00729	Elongator protein 3, MiaB family, Radical SAM
Synpcc7942_2383	SM00670	Large family of predicted nucleotide-binding domains
Synpcc7942_2384	SM00890	Domain of unknown function
Synpcc7942_2388	SM00835	Cupin
Synpcc7942_2389	SM00271	DnaJ molecular chaperone homology domain
Synpcc7942_2398	SM00732	Likely ribonuclease with RNase H fold.
Synpcc7942_2409	SM00788	Adenylosuccinate synthetase
Synpcc7942_2412	SM00244	prohibitin homologues
Synpcc7942_2416	SM00448	cheY-homologous receiver domain
Synpcc7942_2416	SM00862	Transcriptional regulatory protein, C terminal
Synpcc7942_2423	SM01228	Synpcc7942_2423
Synpcc7942_2427	SM00450	Rhodanese Homology Domain
Synpcc7942_2440	SM00316	Ribosomal protein S1-like RNA-binding domain
Synpcc7942_2440	SM00322	K homology RNA-binding domain
Synpcc7942_2441	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_2466	SM00448	cheY-homologous receiver domain
Synpcc7942_2466	SM00862	Transcriptional regulatory protein, C terminal
Synpcc7942_2472	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_2472	SM00962	SRP54-type protein, GTPase domain
Synpcc7942_2472	SM00963	SRP54-type protein, helical bundle domain
Synpcc7942_2473	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
Synpcc7942_2473	SM00331	Sigma factor PP2C-like phosphatases
Synpcc7942_2480	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
Synpcc7942_2491	SM00387	Histidine kinase-like ATPases
Synpcc7942_2491	SM00433	TopoisomeraseII
Synpcc7942_2492	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_2493	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_2497	SM00562	Synpcc7942_2497
Synpcc7942_2498	SM00244	prohibitin homologues
Synpcc7942_2499	SM00244	prohibitin homologues
Synpcc7942_2512	SM00729	Elongator protein 3, MiaB family, Radical SAM
Synpcc7942_2519	SM00052	Putative diguanylate phosphodiesterase
Synpcc7942_2519	SM00267	diguanylate cyclase
Synpcc7942_2521	SM00670	Large family of predicted nucleotide-binding domains
Synpcc7942_2526	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_2526	SM00994	ClpX C4-type zinc finger
Synpcc7942_2526	SM01086	C-terminal, D2-small domain, of ClpB protein
Synpcc7942_2534	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
Synpcc7942_2534	SM00267	diguanylate cyclase
Synpcc7942_2535	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
Synpcc7942_2535	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Synpcc7942_2535	SM00091	PAS domain
Synpcc7942_2535	SM00267	diguanylate cyclase
Synpcc7942_2536	SM00028	Tetratricopeptide repeats
Synpcc7942_2536	SM00271	DnaJ molecular chaperone homology domain
Synpcc7942_2543	SM00986	Uracil DNA glycosylase superfamily
Synpcc7942_2543	SM00987	UreE urease accessory protein, C-terminal domain 
Synpcc7942_2557	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
Synpcc7942_2565	SM00841	Elongation factor P, C-terminal
Synpcc7942_2565	SM01185	Synpcc7942_2565
Synpcc7942_2569	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
Synpcc7942_2574	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_2579	SM00271	DnaJ molecular chaperone homology domain
Synpcc7942_2595	SM01091	Transporter associated domain
Synpcc7942_2597	SM01118	Synpcc7942_2597
Synpcc7942_2606	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
Synpcc7942_B2619	SM00947	Carbonic anhydrase
Synpcc7942_B2620	SM01060	Synpcc7942_B2620
Synpcc7942_B2626	SM00470	ParB-like nuclease domain
Synpcc7942_B2628	SM00382	ATPases associated with a variety of cellular activities
Synpcc7942_B2642	SM00829	Enoylreductase
Synpcc7942_B2644	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
Synpcc7942_B2644	SM00421	helix_turn_helix, Lux Regulon
Synpcc7942_B2646	SM00387	Histidine kinase-like ATPases
Synpcc7942_B2646	SM00388	His Kinase A (phosphoacceptor) domain
Synpcc7942_B2647	SM00448	cheY-homologous receiver domain
Synpcc7942_B2647	SM00862	Transcriptional regulatory protein, C terminal
Synpcc7942_B2654	SM00450	Rhodanese Homology Domain
