locus-tag class description SynA1544_00001 PF00712 DNA polymerase III beta subunit, N-terminal domain SynA1544_00001 PF02768 DNA polymerase III beta subunit, C-terminal domain SynA1544_00001 PF02767 DNA polymerase III beta subunit, central domain SynA1544_00003 PF02769 AIR synthase related protein, C-terminal domain SynA1544_00003 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain SynA1544_00003 PF00586 AIR synthase related protein, N-terminal domain SynA1544_00004 PF00156 Phosphoribosyl transferase domain SynA1544_00005 PF00521 DNA gyrase/topoisomerase IV, subunit A SynA1544_00005 PF03989 DNA gyrase C-terminal domain, beta-propeller SynA1544_00007 PF08331 Domain of unknown function (DUF1730) SynA1544_00010 PF01029 NusB family SynA1544_00011 PF00448 SRP54-type protein, GTPase domain SynA1544_00011 PF02881 SRP54-type protein, helical bundle domain SynA1544_00012 PF07228 Stage II sporulation protein E (SpoIIE) SynA1544_00012 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain SynA1544_00013 PF00206 Lyase SynA1544_00013 PF14698 Argininosuccinate lyase C-terminal SynA1544_00014 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) SynA1544_00015 PF01207 Dihydrouridine synthase (Dus) SynA1544_00016 PF01641 SelR domain SynA1544_00018 PF00482 Type II secretion system (T2SS), protein F SynA1544_00019 PF00437 Type II/IV secretion system protein SynA1544_00020 PF00437 Type II/IV secretion system protein SynA1544_00020 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain SynA1544_00021 PF01025 GrpE SynA1544_00022 PF00684 DnaJ central domain SynA1544_00022 PF01556 DnaJ C terminal domain SynA1544_00022 PF00226 DnaJ domain SynA1544_00024 PF03193 RsgA GTPase SynA1544_00025 PF02575 YbaB/EbfC DNA-binding family SynA1544_00026 PF01565 FAD binding domain SynA1544_00026 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain SynA1544_00027 PF08245 Mur ligase middle domain SynA1544_00027 PF01225 Mur ligase family, catalytic domain SynA1544_00027 PF02875 Mur ligase family, glutamate ligase domain SynA1544_00028 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SynA1544_00028 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SynA1544_00029 PF00586 AIR synthase related protein, N-terminal domain SynA1544_00029 PF02769 AIR synthase related protein, C-terminal domain SynA1544_00030 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SynA1544_00031 PF09285 Elongation factor P, C-terminal SynA1544_00031 PF08207 Elongation factor P (EF-P) KOW-like domain SynA1544_00031 PF01132 Elongation factor P (EF-P) OB domain SynA1544_00032 PF00364 Biotin-requiring enzyme SynA1544_00033 PF04166 Pyridoxal phosphate biosynthetic protein PdxA SynA1544_00039 PF04434 SWIM zinc finger SynA1544_00039 PF00176 SNF2 family N-terminal domain SynA1544_00039 PF00271 Helicase conserved C-terminal domain SynA1544_00047 PF00266 Aminotransferase class-V SynA1544_00048 PF01888 CbiD SynA1544_00049 PF00117 Glutamine amidotransferase class-I SynA1544_00049 PF00958 GMP synthase C terminal domain SynA1544_00053 PF00905 Penicillin binding protein transpeptidase domain SynA1544_00053 PF03717 Penicillin-binding Protein dimerisation domain SynA1544_00054 PF13439 Glycosyltransferase Family 4 SynA1544_00054 PF00534 Glycosyl transferases group 1 SynA1544_00055 PF16363 GDP-mannose 4,6 dehydratase SynA1544_00057 PF05690 Thiazole biosynthesis protein ThiG SynA1544_00060 PF00453 Ribosomal protein L20 SynA1544_00061 PF01632 Ribosomal protein L35 SynA1544_00062 PF08486 Stage II sporulation protein SynA1544_00064 PF12169 DNA polymerase III subunits gamma and tau domain III SynA1544_00066 PF06689 ClpX C4-type zinc finger SynA1544_00066 PF10431 C-terminal, D2-small domain, of ClpB protein SynA1544_00066 PF07724 AAA domain (Cdc48 subfamily) SynA1544_00067 PF00574 Clp protease SynA1544_00068 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SynA1544_00068 PF05698 Bacterial trigger factor protein (TF) C-terminus SynA1544_00068 PF05697 Bacterial trigger factor protein (TF) SynA1544_00069 PF02774 Semialdehyde dehydrogenase, dimerisation domain SynA1544_00069 PF01118 Semialdehyde dehydrogenase, NAD binding domain SynA1544_00070 PF00701 Dihydrodipicolinate synthetase family SynA1544_00071 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain SynA1544_00071 PF17770 Ribonuclease J C-terminal domain SynA1544_00071 PF00753 Metallo-beta-lactamase superfamily SynA1544_00073 PF00696 Amino acid kinase family SynA1544_00073 PF13840 ACT domain SynA1544_00075 PF02570 Precorrin-8X methylmutase SynA1544_00076 PF01171 PP-loop family SynA1544_00076 PF09179 TilS substrate binding domain SynA1544_00078 PF01737 YCF9 SynA1544_00079 PF00885 6,7-dimethyl-8-ribityllumazine synthase SynA1544_00081 PF05192 MutS domain III SynA1544_00081 PF05188 MutS domain II SynA1544_00081 PF05190 MutS family domain IV SynA1544_00081 PF00488 MutS domain V SynA1544_00081 PF01624 MutS domain I SynA1544_00082 PF00488 MutS domain V SynA1544_00082 PF01624 MutS domain I SynA1544_00082 PF05190 MutS family domain IV SynA1544_00082 PF05192 MutS domain III SynA1544_00082 PF05188 MutS domain II SynA1544_00084 PF02151 UvrB/uvrC motif SynA1544_00084 PF04851 Type III restriction enzyme, res subunit SynA1544_00084 PF00271 Helicase conserved C-terminal domain SynA1544_00084 PF12344 Ultra-violet resistance protein B SynA1544_00084 PF17757 UvrB interaction domain SynA1544_00086 PF07517 SecA DEAD-like domain SynA1544_00086 PF07516 SecA Wing and Scaffold domain SynA1544_00086 PF01043 SecA preprotein cross-linking domain SynA1544_00088 PF06426 Serine acetyltransferase, N-terminal SynA1544_00088 PF00132 Bacterial transferase hexapeptide (six repeats) SynA1544_00089 PF00392 Bacterial regulatory proteins, gntR family SynA1544_00090 PF01738 Dienelactone hydrolase family SynA1544_00091 PF00707 Translation initiation factor IF-3, C-terminal domain SynA1544_00091 PF05198 Translation initiation factor IF-3, N-terminal domain SynA1544_00093 PF01751 Toprim domain SynA1544_00093 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SynA1544_00093 PF00986 DNA gyrase B subunit, carboxyl terminus SynA1544_00093 PF00204 DNA gyrase B SynA1544_00095 PF02537 CrcB-like protein, Camphor Resistance (CrcB) SynA1544_00096 PF02537 CrcB-like protein, Camphor Resistance (CrcB) SynA1544_00097 PF00255 Glutathione peroxidase SynA1544_00098 PF01769 Divalent cation transporter SynA1544_00098 PF00571 CBS domain SynA1544_00098 PF03448 MgtE intracellular N domain SynA1544_00099 PF04542 Sigma-70 region 2 SynA1544_00099 PF00140 Sigma-70 factor, region 1.2 SynA1544_00099 PF04539 Sigma-70 region 3 SynA1544_00099 PF04545 Sigma-70, region 4 SynA1544_00100 PF00561 alpha/beta hydrolase fold SynA1544_00101 PF14815 NUDIX domain SynA1544_00101 PF00730 HhH-GPD superfamily base excision DNA repair protein SynA1544_00101 PF00633 Helix-hairpin-helix motif SynA1544_00101 PF10576 Iron-sulfur binding domain of endonuclease III SynA1544_00102 PF00294 pfkB family carbohydrate kinase SynA1544_00103 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE SynA1544_00104 PF05221 S-adenosyl-L-homocysteine hydrolase SynA1544_00104 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain SynA1544_00105 PF09335 SNARE associated Golgi protein SynA1544_00106 PF00436 Single-strand binding protein family SynA1544_00108 PF04085 rod shape-determining protein MreC SynA1544_00111 PF00072 Response regulator receiver domain SynA1544_00111 PF00486 Transcriptional regulatory protein, C terminal SynA1544_00112 PF00152 tRNA synthetases class II (D, K and N) SynA1544_00112 PF01336 OB-fold nucleic acid binding domain SynA1544_00116 PF10017 Histidine-specific methyltransferase, SAM-dependent SynA1544_00117 PF12867 DinB superfamily SynA1544_00117 PF03781 Sulfatase-modifying factor enzyme 1 SynA1544_00118 PF00069 Protein kinase domain SynA1544_00119 PF01668 SmpB protein SynA1544_00120 PF05491 RuvB C-terminal winged helix domain SynA1544_00120 PF05496 Holliday junction DNA helicase RuvB P-loop domain SynA1544_00120 PF17864 RuvB AAA lid domain SynA1544_00122 PF01546 Peptidase family M20/M25/M40 SynA1544_00122 PF07687 Peptidase dimerisation domain SynA1544_00125 PF01964 Radical SAM ThiC family SynA1544_00126 PF02779 Transketolase, pyrimidine binding domain SynA1544_00126 PF02780 Transketolase, C-terminal domain SynA1544_00126 PF00456 Transketolase, thiamine diphosphate binding domain SynA1544_00127 PF00109 Beta-ketoacyl synthase, N-terminal domain SynA1544_00127 PF02801 Beta-ketoacyl synthase, C-terminal domain SynA1544_00128 PF00550 Phosphopantetheine attachment site SynA1544_00129 PF12838 4Fe-4S dicluster domain SynA1544_00130 PF01380 SIS domain SynA1544_00131 PF00483 Nucleotidyl transferase SynA1544_00131 PF01050 Mannose-6-phosphate isomerase SynA1544_00132 PF01782 RimM N-terminal domain SynA1544_00132 PF05239 PRC-barrel domain SynA1544_00134 PF00027 Cyclic nucleotide-binding domain SynA1544_00134 PF00520 Ion transport protein SynA1544_00135 PF14622 Ribonuclease-III-like SynA1544_00135 PF00035 Double-stranded RNA binding motif SynA1544_00140 PF00343 Carbohydrate phosphorylase SynA1544_00141 PF00999 Sodium/hydrogen exchanger family SynA1544_00143 PF12697 Alpha/beta hydrolase family SynA1544_00145 PF01565 FAD binding domain SynA1544_00147 PF13183 4Fe-4S dicluster domain SynA1544_00147 PF02754 Cysteine-rich domain SynA1544_00149 PF00180 Isocitrate/isopropylmalate dehydrogenase SynA1544_00150 PF00535 Glycosyl transferase family 2 SynA1544_00152 PF01048 Phosphorylase superfamily SynA1544_00154 PF01126 Heme oxygenase SynA1544_00156 PF00664 ABC transporter transmembrane region SynA1544_00156 PF00005 ABC transporter SynA1544_00158 PF00534 Glycosyl transferases group 1 SynA1544_00159 PF13439 Glycosyltransferase Family 4 SynA1544_00159 PF00534 Glycosyl transferases group 1 SynA1544_00160 PF13439 Glycosyltransferase Family 4 SynA1544_00160 PF00534 Glycosyl transferases group 1 SynA1544_00163 PF00793 DAHP synthetase I family SynA1544_00166 PF13361 UvrD-like helicase C-terminal domain SynA1544_00166 PF00580 UvrD/REP helicase N-terminal domain SynA1544_00168 PF02348 Cytidylyltransferase SynA1544_00170 PF01380 SIS domain SynA1544_00170 PF00571 CBS domain SynA1544_00171 PF00571 CBS domain SynA1544_00171 PF01743 Poly A polymerase head domain SynA1544_00173 PF02769 AIR synthase related protein, C-terminal domain SynA1544_00173 PF00586 AIR synthase related protein, N-terminal domain SynA1544_00174 PF16363 GDP-mannose 4,6 dehydratase SynA1544_00177 PF00664 ABC transporter transmembrane region SynA1544_00177 PF00005 ABC transporter SynA1544_00177 PF03412 Peptidase C39 family SynA1544_00178 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SynA1544_00178 PF00529 HlyD membrane-fusion protein of T1SS SynA1544_00180 PF00535 Glycosyl transferase family 2 SynA1544_00182 PF13393 Histidyl-tRNA synthetase SynA1544_00182 PF03129 Anticodon binding domain SynA1544_00183 PF16363 GDP-mannose 4,6 dehydratase SynA1544_00184 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain SynA1544_00184 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain SynA1544_00184 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain SynA1544_00185 PF01370 NAD dependent epimerase/dehydratase family SynA1544_00186 PF01788 PsbJ SynA1544_00187 PF02419 PsbL protein SynA1544_00188 PF00283 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits SynA1544_00189 PF00283 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits SynA1544_00189 PF00284 Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit SynA1544_00190 PF14870 Photosynthesis system II assembly factor YCF48 SynA1544_00191 PF00301 Rubredoxin SynA1544_00192 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 SynA1544_00193 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit SynA1544_00194 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit SynA1544_00195 PF01933 Uncharacterised protein family UPF0052 SynA1544_00196 PF08402 TOBE domain SynA1544_00196 PF00005 ABC transporter SynA1544_00198 PF17863 AAA lid domain SynA1544_00198 PF01078 Magnesium chelatase, subunit ChlI SynA1544_00198 PF13519 von Willebrand factor type A domain SynA1544_00201 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) SynA1544_00202 PF00293 NUDIX domain SynA1544_00203 PF03441 FAD binding domain of DNA photolyase SynA1544_00203 PF00875 DNA photolyase SynA1544_00204 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SynA1544_00210 PF00475 Imidazoleglycerol-phosphate dehydratase SynA1544_00211 PF03055 Retinal pigment epithelial membrane protein SynA1544_00214 PF02028 BCCT, betaine/carnitine/choline family transporter SynA1544_00215 PF00890 FAD binding domain SynA1544_00218 PF01725 Ham1 family SynA1544_00219 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SynA1544_00219 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SynA1544_00219 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SynA1544_00219 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SynA1544_00221 PF01571 Aminomethyltransferase folate-binding domain SynA1544_00225 PF03471 Transporter associated domain SynA1544_00225 PF00571 CBS domain SynA1544_00225 PF01595 Cyclin M transmembrane N-terminal domain SynA1544_00230 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SynA1544_00230 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SynA1544_00232 PF03808 Glycosyl transferase WecB/TagA/CpsF family SynA1544_00233 PF02533 Photosystem II 4 kDa reaction centre component SynA1544_00234 PF01702 Queuine tRNA-ribosyltransferase SynA1544_00235 PF02654 Cobalamin-5-phosphate synthase SynA1544_00236 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SynA1544_00236 PF00512 His Kinase A (phospho-acceptor) domain SynA1544_00241 PF01808 AICARFT/IMPCHase bienzyme SynA1544_00241 PF02142 MGS-like domain SynA1544_00244 PF02401 LytB protein SynA1544_00245 PF00909 Ammonium Transporter Family SynA1544_00246 PF17746 SfsA N-terminal OB domain SynA1544_00246 PF03749 Sugar fermentation stimulation protein RE domain SynA1544_00247 PF03023 Lipid II flippase MurJ SynA1544_00252 PF00464 Serine hydroxymethyltransferase SynA1544_00253 PF00953 Glycosyl transferase family 4 SynA1544_00254 PF18146 Damage-inducible protein CinA KH domain SynA1544_00254 PF00994 Probable molybdopterin binding domain SynA1544_00254 PF02464 Competence-damaged protein SynA1544_00255 PF00330 Aconitase family (aconitate hydratase) SynA1544_00256 PF00694 Aconitase C-terminal domain SynA1544_00259 PF02532 Photosystem II reaction centre I protein (PSII 4.8 kDa protein) SynA1544_00262 PF02468 Photosystem II reaction centre N protein (psbN) SynA1544_00263 PF00737 Photosystem II 10 kDa phosphoprotein SynA1544_00264 PF02416 mttA/Hcf106 family SynA1544_00265 PF01195 Peptidyl-tRNA hydrolase SynA1544_00268 PF11283 Protein of unknown function (DUF3084) SynA1544_00269 PF00027 Cyclic nucleotide-binding domain SynA1544_00269 PF13545 Crp-like helix-turn-helix domain SynA1544_00270 PF03725 3' exoribonuclease family, domain 2 SynA1544_00270 PF01138 3' exoribonuclease family, domain 1 SynA1544_00272 PF00692 dUTPase SynA1544_00274 PF00085 Thioredoxin SynA1544_00275 PF01464 Transglycosylase SLT domain SynA1544_00276 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SynA1544_00276 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SynA1544_00276 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SynA1544_00276 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SynA1544_00279 PF02390 Putative methyltransferase SynA1544_00284 PF08264 Anticodon-binding domain of tRNA SynA1544_00284 PF00133 tRNA synthetases class I (I, L, M and V) SynA1544_00284 PF06827 Zinc finger found in FPG and IleRS SynA1544_00288 PF02686 Glu-tRNAGln amidotransferase C subunit SynA1544_00290 PF02633 Creatinine amidohydrolase SynA1544_00292 PF02592 Putative vitamin uptake transporter SynA1544_00293 PF02245 Methylpurine-DNA glycosylase (MPG) SynA1544_00294 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SynA1544_00294 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SynA1544_00295 PF07992 Pyridine nucleotide-disulphide oxidoreductase SynA1544_00300 PF10742 Protein of unknown function (DUF2555) SynA1544_00301 PF02441 Flavoprotein SynA1544_00301 PF04127 DNA / pantothenate metabolism flavoprotein SynA1544_00303 PF01716 Manganese-stabilising protein / photosystem II polypeptide SynA1544_00304 PF14306 PUA-like domain SynA1544_00304 PF01747 ATP-sulfurylase SynA1544_00305 PF00004 ATPase family associated with various cellular activities (AAA) SynA1544_00305 PF17862 AAA+ lid domain SynA1544_00305 PF01434 Peptidase family M41 SynA1544_00305 PF06480 FtsH Extracellular SynA1544_00308 PF01264 Chorismate synthase SynA1544_00312 PF00124 Photosynthetic reaction centre protein SynA1544_00313 PF01938 TRAM domain SynA1544_00313 PF04055 Radical SAM superfamily SynA1544_00313 PF00919 Uncharacterized protein family UPF0004 SynA1544_00315 PF02617 ATP-dependent Clp protease adaptor protein ClpS SynA1544_00316 PF00155 Aminotransferase class I and II SynA1544_00318 PF10150 Ribonuclease E/G family SynA1544_00319 PF01351 Ribonuclease HII SynA1544_00321 PF01842 ACT domain SynA1544_00321 PF00800 Prephenate dehydratase SynA1544_00322 PF08241 Methyltransferase domain SynA1544_00323 PF02190 ATP-dependent protease La (LON) substrate-binding domain SynA1544_00323 PF05362 Lon protease (S16) C-terminal proteolytic domain SynA1544_00323 PF00004 ATPase family associated with various cellular activities (AAA) SynA1544_00324 PF00338 Ribosomal protein S10p/S20e SynA1544_00325 PF03143 Elongation factor Tu C-terminal domain SynA1544_00325 PF03144 Elongation factor Tu domain 2 SynA1544_00325 PF00009 Elongation factor Tu GTP binding domain SynA1544_00326 PF00679 Elongation factor G C-terminus SynA1544_00326 PF00009 Elongation factor Tu GTP binding domain SynA1544_00326 PF03764 Elongation factor G, domain IV SynA1544_00326 PF14492 Elongation Factor G, domain II SynA1544_00326 PF03144 Elongation factor Tu domain 2 SynA1544_00327 PF00177 Ribosomal protein S7p/S5e SynA1544_00328 PF00164 Ribosomal protein S12/S23 SynA1544_00329 PF01521 Iron-sulphur cluster biosynthesis SynA1544_00331 PF01645 Conserved region in glutamate synthase SynA1544_00331 PF00310 Glutamine amidotransferases class-II SynA1544_00331 PF04898 Glutamate synthase central domain SynA1544_00331 PF01493 GXGXG motif SynA1544_00333 PF04055 Radical SAM superfamily SynA1544_00335 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SynA1544_00337 PF00223 Photosystem I psaA/psaB protein SynA1544_00338 PF00223 Photosystem I psaA/psaB protein SynA1544_00341 PF00873 AcrB/AcrD/AcrF family SynA1544_00342 PF02605 Photosystem I reaction centre subunit XI SynA1544_00343 PF00796 Photosystem I reaction centre subunit VIII SynA1544_00345 PF00535 Glycosyl transferase family 2 SynA1544_00349 PF01168 Alanine racemase, N-terminal domain SynA1544_00349 PF00842 Alanine racemase, C-terminal domain SynA1544_00351 PF00472 RF-1 domain SynA1544_00351 PF03462 PCRF domain SynA1544_00352 PF01197 Ribosomal protein L31 SynA1544_00353 PF00380 Ribosomal protein S9/S16 SynA1544_00354 PF00572 Ribosomal protein L13 SynA1544_00355 PF01416 tRNA pseudouridine synthase SynA1544_00356 PF01196 Ribosomal protein L17 SynA1544_00357 PF01000 RNA polymerase Rpb3/RpoA insert domain SynA1544_00357 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain SynA1544_00357 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain SynA1544_00358 PF00411 Ribosomal protein S11 SynA1544_00359 PF00416 Ribosomal protein S13/S18 SynA1544_00360 PF00444 Ribosomal protein L36 SynA1544_00362 PF00344 SecY translocase SynA1544_00363 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A SynA1544_00364 PF03719 Ribosomal protein S5, C-terminal domain SynA1544_00364 PF00333 Ribosomal protein S5, N-terminal domain SynA1544_00365 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast SynA1544_00366 PF00347 Ribosomal protein L6 SynA1544_00367 PF00410 Ribosomal protein S8 SynA1544_00368 PF00673 ribosomal L5P family C-terminus SynA1544_00368 PF00281 Ribosomal protein L5 SynA1544_00369 PF00467 KOW motif SynA1544_00369 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 SynA1544_00370 PF00238 Ribosomal protein L14p/L23e SynA1544_00371 PF00366 Ribosomal protein S17 SynA1544_00372 PF00831 Ribosomal L29 protein SynA1544_00373 PF00252 Ribosomal protein L16p/L10e SynA1544_00374 PF07650 KH domain SynA1544_00374 PF00189 Ribosomal protein S3, C-terminal domain SynA1544_00375 PF00237 Ribosomal protein L22p/L17e SynA1544_00376 PF00203 Ribosomal protein S19 SynA1544_00377 PF00181 Ribosomal Proteins L2, RNA binding domain SynA1544_00377 PF03947 Ribosomal Proteins L2, C-terminal domain SynA1544_00378 PF00276 Ribosomal protein L23 SynA1544_00379 PF00573 Ribosomal protein L4/L1 family SynA1544_00380 PF00297 Ribosomal protein L3 SynA1544_00382 PF11909 NADH-quinone oxidoreductase cyanobacterial subunit N SynA1544_00387 PF00154 recA bacterial DNA recombination protein SynA1544_00392 PF01593 Flavin containing amine oxidoreductase SynA1544_00394 PF03881 Fructosamine kinase SynA1544_00397 PF00899 ThiF family SynA1544_00397 PF00581 Rhodanese-like domain SynA1544_00398 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP SynA1544_00399 PF02540 NAD synthase SynA1544_00400 PF02675 S-adenosylmethionine decarboxylase SynA1544_00404 PF00311 Phosphoenolpyruvate carboxylase SynA1544_00405 PF04107 Glutamate-cysteine ligase family 2(GCS2) SynA1544_00406 PF00425 chorismate binding enzyme SynA1544_00406 PF04715 Anthranilate synthase component I, N terminal region SynA1544_00407 PF02531 PsaD SynA1544_00409 PF01098 Cell cycle protein SynA1544_00410 PF01883 Iron-sulfur cluster assembly protein SynA1544_00410 PF10609 NUBPL iron-transfer P-loop NTPase SynA1544_00411 PF01218 Coproporphyrinogen III oxidase SynA1544_00415 PF00570 HRDC domain SynA1544_00415 PF01612 3'-5' exonuclease SynA1544_00421 PF00248 Aldo/keto reductase family SynA1544_00423 PF02769 AIR synthase related protein, C-terminal domain SynA1544_00423 PF00586 AIR synthase related protein, N-terminal domain SynA1544_00425 PF03330 Lytic transglycolase SynA1544_00426 PF02224 Cytidylate kinase SynA1544_00426 PF02569 Pantoate-beta-alanine ligase SynA1544_00427 PF01451 Low molecular weight phosphotyrosine protein phosphatase SynA1544_00428 PF03130 PBS lyase HEAT-like repeat SynA1544_00429 PF03130 PBS lyase HEAT-like repeat SynA1544_00430 PF00502 Phycobilisome protein SynA1544_00431 PF00502 Phycobilisome protein SynA1544_00432 PF05996 Ferredoxin-dependent bilin reductase SynA1544_00433 PF05996 Ferredoxin-dependent bilin reductase SynA1544_00434 PF09367 CpeS-like protein SynA1544_00436 PF00502 Phycobilisome protein SynA1544_00437 PF00502 Phycobilisome protein SynA1544_00440 PF10847 Protein of unknown function (DUF2656) SynA1544_00444 PF06206 CpeT/CpcT family (DUF1001) SynA1544_00445 PF09367 CpeS-like protein SynA1544_00447 PF00427 Phycobilisome Linker polypeptide SynA1544_00447 PF01383 CpcD/allophycocyanin linker domain SynA1544_00448 PF00427 Phycobilisome Linker polypeptide SynA1544_00448 PF01383 CpcD/allophycocyanin linker domain SynA1544_00449 PF01383 CpcD/allophycocyanin linker domain SynA1544_00449 PF00427 Phycobilisome Linker polypeptide SynA1544_00451 PF00427 Phycobilisome Linker polypeptide SynA1544_00454 PF06206 CpeT/CpcT family (DUF1001) SynA1544_00462 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SynA1544_00463 PF00438 S-adenosylmethionine synthetase, N-terminal domain SynA1544_00463 PF02772 S-adenosylmethionine synthetase, central domain SynA1544_00463 PF02773 S-adenosylmethionine synthetase, C-terminal domain SynA1544_00464 PF13419 Haloacid dehalogenase-like hydrolase SynA1544_00465 PF00575 S1 RNA binding domain SynA1544_00467 PF03477 ATP cone domain SynA1544_00469 PF01405 Photosystem II reaction centre T protein SynA1544_00470 PF00421 Photosystem II protein SynA1544_00472 PF05151 Photosystem II reaction centre M protein (PsbM) SynA1544_00473 PF00582 Universal stress protein family SynA1544_00475 PF17782 DprA winged helix domain SynA1544_00475 PF02481 DNA recombination-mediator protein A SynA1544_00476 PF05175 Methyltransferase small domain SynA1544_00477 PF01300 Telomere recombination SynA1544_00477 PF03481 Putative GTP-binding controlling metal-binding SynA1544_00480 PF00196 Bacterial regulatory proteins, luxR family SynA1544_00480 PF00072 Response regulator receiver domain SynA1544_00481 PF03776 Septum formation topological specificity factor MinE SynA1544_00482 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain SynA1544_00483 PF03775 Septum formation inhibitor MinC, C-terminal domain SynA1544_00484 PF01966 HD domain SynA1544_00485 PF00595 PDZ domain SynA1544_00485 PF03572 Peptidase family S41 SynA1544_00486 PF00033 Cytochrome b/b6/petB SynA1544_00487 PF00032 Cytochrome b(C-terminal)/b6/petD SynA1544_00501 PF13419 Haloacid dehalogenase-like hydrolase SynA1544_00502 PF00596 Class II Aldolase and Adducin N-terminal domain SynA1544_00503 PF01008 Initiation factor 2 subunit family SynA1544_00504 PF06827 Zinc finger found in FPG and IleRS SynA1544_00504 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain SynA1544_00504 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain SynA1544_00505 PF02427 Photosystem I reaction centre subunit IV / PsaE SynA1544_00507 PF09382 RQC domain SynA1544_00507 PF16124 RecQ zinc-binding SynA1544_00507 PF00570 HRDC domain SynA1544_00507 PF00271 Helicase conserved C-terminal domain SynA1544_00507 PF00270 DEAD/DEAH box helicase SynA1544_00508 PF01476 LysM domain SynA1544_00508 PF05257 CHAP domain SynA1544_00509 PF00171 Aldehyde dehydrogenase family SynA1544_00510 PF16657 Maltogenic Amylase, C-terminal domain SynA1544_00510 PF00128 Alpha amylase, catalytic domain SynA1544_00511 PF01266 FAD dependent oxidoreductase SynA1544_00511 PF16901 C-terminal domain of alpha-glycerophosphate oxidase SynA1544_00512 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SynA1544_00512 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SynA1544_00513 PF16657 Maltogenic Amylase, C-terminal domain SynA1544_00513 PF02903 Alpha amylase, N-terminal ig-like domain SynA1544_00513 PF00128 Alpha amylase, catalytic domain SynA1544_00516 PF01220 Dehydroquinase class II SynA1544_00518 PF00916 Sulfate permease family SynA1544_00518 PF01740 STAS domain SynA1544_00519 PF07884 Vitamin K epoxide reductase family SynA1544_00520 PF01556 DnaJ C terminal domain SynA1544_00520 PF00226 DnaJ domain SynA1544_00521 PF00490 Delta-aminolevulinic acid dehydratase SynA1544_00523 PF01713 Smr domain SynA1544_00523 PF00488 MutS domain V SynA1544_00524 PF00005 ABC transporter SynA1544_00524 PF17912 MalK OB fold domain SynA1544_00525 PF01018 GTP1/OBG SynA1544_00525 PF01926 50S ribosome-binding GTPase SynA1544_00529 PF00005 ABC transporter SynA1544_00529 PF16326 ABC transporter C-terminal domain SynA1544_00529 PF12848 ABC transporter SynA1544_00531 PF13409 Glutathione S-transferase, N-terminal domain SynA1544_00532 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family SynA1544_00535 PF00124 Photosynthetic reaction centre protein SynA1544_00536 PF01679 Proteolipid membrane potential modulator SynA1544_00565 PF00565 Staphylococcal nuclease homologue SynA1544_00601 PF04539 Sigma-70 region 3 SynA1544_00601 PF04545 Sigma-70, region 4 SynA1544_00601 PF04542 Sigma-70 region 2 SynA1544_00608 PF00271 Helicase conserved C-terminal domain SynA1544_00608 PF04851 Type III restriction enzyme, res subunit SynA1544_00609 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system SynA1544_00626 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SynA1544_00627 PF00459 Inositol monophosphatase family SynA1544_00630 PF00575 S1 RNA binding domain SynA1544_00630 PF01138 3' exoribonuclease family, domain 1 SynA1544_00630 PF00013 KH domain SynA1544_00630 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain SynA1544_00630 PF03725 3' exoribonuclease family, domain 2 SynA1544_00631 PF00253 Ribosomal protein S14p/S29e SynA1544_00632 PF02163 Peptidase family M50 SynA1544_00632 PF13180 PDZ domain SynA1544_00633 PF02403 Seryl-tRNA synthetase N-terminal domain SynA1544_00633 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SynA1544_00635 PF00004 ATPase family associated with various cellular activities (AAA) SynA1544_00635 PF17862 AAA+ lid domain SynA1544_00635 PF06480 FtsH Extracellular SynA1544_00635 PF01434 Peptidase family M41 SynA1544_00637 PF02096 60Kd inner membrane protein SynA1544_00639 PF00825 Ribonuclease P SynA1544_00640 PF00468 Ribosomal protein L34 SynA1544_00643 PF01343 Peptidase family S49 SynA1544_00644 PF00892 EamA-like transporter family SynA1544_00645 PF00534 Glycosyl transferases group 1 SynA1544_00645 PF13439 Glycosyltransferase Family 4 SynA1544_00646 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase SynA1544_00649 PF04012 PspA/IM30 family SynA1544_00650 PF00085 Thioredoxin SynA1544_00651 PF00155 Aminotransferase class I and II SynA1544_00652 PF02237 Biotin protein ligase C terminal domain SynA1544_00652 PF03099 Biotin/lipoate A/B protein ligase family SynA1544_00652 PF08279 HTH domain SynA1544_00653 PF01551 Peptidase family M23 SynA1544_00653 PF04225 Opacity-associated protein A LysM-like domain SynA1544_00654 PF00486 Transcriptional regulatory protein, C terminal SynA1544_00654 PF00072 Response regulator receiver domain SynA1544_00657 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SynA1544_00657 PF00672 HAMP domain SynA1544_00657 PF00512 His Kinase A (phospho-acceptor) domain SynA1544_00658 PF02687 FtsX-like permease family SynA1544_00658 PF12704 MacB-like periplasmic core domain SynA1544_00658 PF00005 ABC transporter SynA1544_00659 PF00361 Proton-conducting membrane transporter SynA1544_00660 PF01131 DNA topoisomerase SynA1544_00660 PF01751 Toprim domain SynA1544_00660 PF13368 Topoisomerase C-terminal repeat SynA1544_00667 PF00677 Lumazine binding domain SynA1544_00669 PF00510 Cytochrome c oxidase subunit III SynA1544_00670 PF00115 Cytochrome C and Quinol oxidase polypeptide I SynA1544_00671 PF00116 Cytochrome C oxidase subunit II, periplasmic domain SynA1544_00671 PF02790 Cytochrome C oxidase subunit II, transmembrane domain SynA1544_00672 PF02628 Cytochrome oxidase assembly protein SynA1544_00673 PF01040 UbiA prenyltransferase family SynA1544_00675 PF13732 Domain of unknown function (DUF4162) SynA1544_00675 PF00005 ABC transporter SynA1544_00678 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase SynA1544_00679 PF00118 TCP-1/cpn60 chaperonin family SynA1544_00682 PF00999 Sodium/hydrogen exchanger family SynA1544_00682 PF02080 TrkA-C domain SynA1544_00682 PF02254 TrkA-N domain SynA1544_00684 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase SynA1544_00685 PF02016 LD-carboxypeptidase N-terminal domain SynA1544_00685 PF17676 LD-carboxypeptidase C-terminal domain SynA1544_00686 PF01040 UbiA prenyltransferase family SynA1544_00687 PF02541 Ppx/GppA phosphatase family SynA1544_00690 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SynA1544_00691 PF01790 Prolipoprotein diacylglyceryl transferase SynA1544_00692 PF01333 Apocytochrome F, C-terminal SynA1544_00692 PF16639 Apocytochrome F, N-terminal SynA1544_00693 PF00355 Rieske [2Fe-2S] domain SynA1544_00695 PF00902 Sec-independent protein translocase protein (TatC) SynA1544_00696 PF05670 NFACT protein RNA binding domain SynA1544_00697 PF00625 Guanylate kinase SynA1544_00698 PF01701 Photosystem I reaction centre subunit IX / PsaJ SynA1544_00699 PF02507 Photosystem I reaction centre subunit III SynA1544_00700 PF00814 Glycoprotease family SynA1544_00701 PF00762 Ferrochelatase SynA1544_00702 PF00437 Type II/IV secretion system protein SynA1544_00703 PF02350 UDP-N-acetylglucosamine 2-epimerase SynA1544_00706 PF00749 tRNA synthetases class I (E and Q), catalytic domain SynA1544_00710 PF01245 Ribosomal protein L19 SynA1544_00712 PF00557 Metallopeptidase family M24 SynA1544_00713 PF00106 short chain dehydrogenase SynA1544_00715 PF07085 DRTGG domain SynA1544_00718 PF04461 Protein of unknown function (DUF520) SynA1544_00724 PF00271 Helicase conserved C-terminal domain SynA1544_00724 PF08494 DEAD/H associated SynA1544_00724 PF00270 DEAD/DEAH box helicase SynA1544_00726 PF01000 RNA polymerase Rpb3/RpoA insert domain SynA1544_00726 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain SynA1544_00726 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain SynA1544_00728 PF18766 SWI2/SNF2 ATPase SynA1544_00728 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) SynA1544_00728 PF11867 Domain of unknown function (DUF3387) SynA1544_00729 PF01420 Type I restriction modification DNA specificity domain SynA1544_00730 PF02384 N-6 DNA Methylase SynA1544_00732 PF02384 N-6 DNA Methylase SynA1544_00734 PF00156 Phosphoribosyl transferase domain SynA1544_00736 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SynA1544_00738 PF00202 Aminotransferase class-III SynA1544_00739 PF02913 FAD linked oxidases, C-terminal domain SynA1544_00739 PF01565 FAD binding domain SynA1544_00740 PF03372 Endonuclease/Exonuclease/phosphatase family SynA1544_00744 PF00004 ATPase family associated with various cellular activities (AAA) SynA1544_00744 PF06480 FtsH Extracellular SynA1544_00744 PF01434 Peptidase family M41 SynA1544_00744 PF17862 AAA+ lid domain SynA1544_00745 PF01969 Protein of unknown function DUF111 SynA1544_00749 PF00005 ABC transporter SynA1544_00749 PF08402 TOBE domain SynA1544_00751 PF07683 Cobalamin synthesis protein cobW C-terminal domain SynA1544_00751 PF02492 CobW/HypB/UreG, nucleotide-binding domain SynA1544_00752 PF01329 Pterin 4 alpha carbinolamine dehydratase SynA1544_00753 PF01894 Uncharacterised protein family UPF0047 SynA1544_00756 PF02074 Carboxypeptidase Taq (M32) metallopeptidase SynA1544_00757 PF00719 Inorganic pyrophosphatase SynA1544_00760 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain SynA1544_00760 PF03900 Porphobilinogen deaminase, C-terminal domain SynA1544_00762 PF04545 Sigma-70, region 4 SynA1544_00762 PF04542 Sigma-70 region 2 SynA1544_00762 PF00140 Sigma-70 factor, region 1.2 SynA1544_00762 PF04539 Sigma-70 region 3 SynA1544_00764 PF00271 Helicase conserved C-terminal domain SynA1544_00764 PF17764 3′ DNA-binding domain (3′BD) SynA1544_00764 PF18074 Primosomal protein N C-terminal domain SynA1544_00764 PF18319 PriA DNA helicase Cys-rich region (CRR) domain SynA1544_00764 PF00270 DEAD/DEAH box helicase SynA1544_00766 PF00696 Amino acid kinase family SynA1544_00767 PF11016 Protein of unknown function (DUF2854) SynA1544_00770 PF02571 Precorrin-6x reductase CbiJ/CobK SynA1544_00772 PF00294 pfkB family carbohydrate kinase SynA1544_00773 PF00709 Adenylosuccinate synthetase SynA1544_00774 PF13326 Photosystem II Pbs27 SynA1544_00775 PF03129 Anticodon binding domain SynA1544_00775 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SynA1544_00775 PF04073 Aminoacyl-tRNA editing domain SynA1544_00779 PF00719 Inorganic pyrophosphatase SynA1544_00783 PF10502 Signal peptidase, peptidase S26 SynA1544_00785 PF00300 Histidine phosphatase superfamily (branch 1) SynA1544_00786 PF02517 CPBP intramembrane metalloprotease SynA1544_00788 PF03793 PASTA domain SynA1544_00788 PF00905 Penicillin binding protein transpeptidase domain SynA1544_00788 PF03717 Penicillin-binding Protein dimerisation domain SynA1544_00789 PF00923 Transaldolase/Fructose-6-phosphate aldolase SynA1544_00789 PF13202 EF hand SynA1544_00791 PF03209 PUCC protein SynA1544_00792 PF00875 DNA photolyase SynA1544_00792 PF03441 FAD binding domain of DNA photolyase SynA1544_00793 PF01494 FAD binding domain SynA1544_00794 PF01765 Ribosome recycling factor SynA1544_00795 PF00696 Amino acid kinase family SynA1544_00797 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP SynA1544_00797 PF12557 Cob(I)alamin adenosyltransferase N terminal SynA1544_00798 PF01209 ubiE/COQ5 methyltransferase family SynA1544_00800 PF00762 Ferrochelatase SynA1544_00801 PF00205 Thiamine pyrophosphate enzyme, central domain SynA1544_00801 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SynA1544_00801 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SynA1544_00806 PF02578 Multi-copper polyphenol oxidoreductase laccase SynA1544_00808 PF00575 S1 RNA binding domain SynA1544_00810 PF11266 Long-chain fatty aldehyde decarbonylase SynA1544_00812 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit SynA1544_00814 PF01227 GTP cyclohydrolase I SynA1544_00815 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase SynA1544_00816 PF02163 Peptidase family M50 SynA1544_00816 PF00571 CBS domain SynA1544_00817 PF03099 Biotin/lipoate A/B protein ligase family SynA1544_00818 PF01925 Sulfite exporter TauE/SafE SynA1544_00820 PF07465 Photosystem I protein M (PsaM) SynA1544_00822 PF00106 short chain dehydrogenase SynA1544_00823 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family SynA1544_00824 PF00148 Nitrogenase component 1 type Oxidoreductase SynA1544_00824 PF08369 Proto-chlorophyllide reductase 57 kD subunit SynA1544_00825 PF00148 Nitrogenase component 1 type Oxidoreductase SynA1544_00828 PF01725 Ham1 family SynA1544_00829 PF00936 BMC domain SynA1544_00830 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain SynA1544_00830 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain SynA1544_00831 PF00101 Ribulose bisphosphate carboxylase, small chain SynA1544_00836 PF00936 BMC domain SynA1544_00837 PF00361 Proton-conducting membrane transporter SynA1544_00837 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus SynA1544_00837 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus SynA1544_00838 PF00361 Proton-conducting membrane transporter SynA1544_00841 PF17866 AAA lid domain SynA1544_00841 PF00004 ATPase family associated with various cellular activities (AAA) SynA1544_00844 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain SynA1544_00844 PF07685 CobB/CobQ-like glutamine amidotransferase domain SynA1544_00846 PF02545 Maf-like protein SynA1544_00848 PF00163 Ribosomal protein S4/S9 N-terminal domain SynA1544_00848 PF01479 S4 domain SynA1544_00849 PF01809 Putative membrane protein insertion efficiency factor SynA1544_00851 PF08245 Mur ligase middle domain SynA1544_00851 PF01225 Mur ligase family, catalytic domain SynA1544_00851 PF02875 Mur ligase family, glutamate ligase domain SynA1544_00858 PF01106 NifU-like domain SynA1544_00859 PF06039 Malate:quinone oxidoreductase (Mqo) SynA1544_00860 PF00893 Small Multidrug Resistance protein SynA1544_00861 PF00679 Elongation factor G C-terminus SynA1544_00861 PF00009 Elongation factor Tu GTP binding domain SynA1544_00861 PF03144 Elongation factor Tu domain 2 SynA1544_00861 PF06421 GTP-binding protein LepA C-terminus SynA1544_00867 PF07963 Prokaryotic N-terminal methylation motif SynA1544_00867 PF00114 Pilin (bacterial filament) SynA1544_00868 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SynA1544_00868 PF00512 His Kinase A (phospho-acceptor) domain SynA1544_00869 PF00072 Response regulator receiver domain SynA1544_00869 PF00486 Transcriptional regulatory protein, C terminal SynA1544_00872 PF00114 Pilin (bacterial filament) SynA1544_00872 PF07963 Prokaryotic N-terminal methylation motif SynA1544_00875 PF00512 His Kinase A (phospho-acceptor) domain SynA1544_00875 PF00672 HAMP domain SynA1544_00875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SynA1544_00876 PF12911 N-terminal TM domain of oligopeptide transport permease C SynA1544_00876 PF00528 Binding-protein-dependent transport system inner membrane component SynA1544_00879 PF00588 SpoU rRNA Methylase family SynA1544_00879 PF12105 SpoU, rRNA methylase, C-terminal SynA1544_00880 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain SynA1544_00881 PF01029 NusB family SynA1544_00881 PF01189 16S rRNA methyltransferase RsmB/F SynA1544_00882 PF00905 Penicillin binding protein transpeptidase domain SynA1544_00882 PF00912 Transglycosylase SynA1544_00883 PF01040 UbiA prenyltransferase family SynA1544_00885 PF00977 Histidine biosynthesis protein SynA1544_00886 PF01209 ubiE/COQ5 methyltransferase family SynA1544_00888 PF02091 Glycyl-tRNA synthetase alpha subunit SynA1544_00891 PF00589 Phage integrase family SynA1544_00891 PF13356 Arm DNA-binding domain SynA1544_00906 PF02397 Bacterial sugar transferase SynA1544_00907 PF03186 CobD/Cbib protein SynA1544_00908 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain SynA1544_00908 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain SynA1544_00909 PF00574 Clp protease SynA1544_00910 PF00574 Clp protease SynA1544_00912 PF04055 Radical SAM superfamily SynA1544_00913 PF02548 Ketopantoate hydroxymethyltransferase SynA1544_00914 PF12327 FtsZ family, C-terminal domain SynA1544_00914 PF00091 Tubulin/FtsZ family, GTPase domain SynA1544_00917 PF07478 D-ala D-ala ligase C-terminus SynA1544_00917 PF01820 D-ala D-ala ligase N-terminus SynA1544_00918 PF04055 Radical SAM superfamily SynA1544_00918 PF00919 Uncharacterized protein family UPF0004 SynA1544_00918 PF01938 TRAM domain SynA1544_00919 PF13378 Enolase C-terminal domain-like SynA1544_00919 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain SynA1544_00925 PF00805 Pentapeptide repeats (8 copies) SynA1544_00926 PF02875 Mur ligase family, glutamate ligase domain SynA1544_00926 PF08245 Mur ligase middle domain SynA1544_00927 PF00202 Aminotransferase class-III SynA1544_00928 PF00202 Aminotransferase class-III SynA1544_00929 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SynA1544_00932 PF00588 SpoU rRNA Methylase family SynA1544_00932 PF08032 RNA 2'-O ribose methyltransferase substrate binding SynA1544_00933 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SynA1544_00933 PF07992 Pyridine nucleotide-disulphide oxidoreductase SynA1544_00934 PF00218 Indole-3-glycerol phosphate synthase SynA1544_00935 PF02777 Iron/manganese superoxide dismutases, C-terminal domain SynA1544_00935 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain SynA1544_00936 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SynA1544_00938 PF00795 Carbon-nitrogen hydrolase SynA1544_00940 PF03853 YjeF-related protein N-terminus SynA1544_00940 PF01256 Carbohydrate kinase SynA1544_00941 PF04542 Sigma-70 region 2 SynA1544_00941 PF04545 Sigma-70, region 4 SynA1544_00941 PF04539 Sigma-70 region 3 SynA1544_00941 PF00140 Sigma-70 factor, region 1.2 SynA1544_00942 PF00676 Dehydrogenase E1 component SynA1544_00944 PF02881 SRP54-type protein, helical bundle domain SynA1544_00944 PF02978 Signal peptide binding domain SynA1544_00944 PF00448 SRP54-type protein, GTPase domain SynA1544_00945 PF00886 Ribosomal protein S16 SynA1544_00946 PF02562 PhoH-like protein SynA1544_00947 PF01027 Inhibitor of apoptosis-promoting Bax1 SynA1544_00948 PF00083 Sugar (and other) transporter SynA1544_00949 PF00083 Sugar (and other) transporter SynA1544_00951 PF07650 KH domain SynA1544_00951 PF01926 50S ribosome-binding GTPase SynA1544_00954 PF01746 tRNA (Guanine-1)-methyltransferase SynA1544_00955 PF00082 Subtilase family SynA1544_00959 PF02542 YgbB family SynA1544_00961 PF00731 AIR carboxylase SynA1544_00965 PF02581 Thiamine monophosphate synthase SynA1544_00965 PF17792 ThiD2 family SynA1544_00967 PF06574 FAD synthetase SynA1544_00967 PF01687 Riboflavin kinase SynA1544_00969 PF01975 Survival protein SurE SynA1544_00970 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain SynA1544_00970 PF01409 tRNA synthetases class II core domain (F) SynA1544_00971 PF01513 ATP-NAD kinase SynA1544_00972 PF00486 Transcriptional regulatory protein, C terminal SynA1544_00972 PF00072 Response regulator receiver domain SynA1544_00974 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SynA1544_00979 PF01872 RibD C-terminal domain SynA1544_00979 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SynA1544_00981 PF02586 SOS response associated peptidase (SRAP) SynA1544_00982 PF17862 AAA+ lid domain SynA1544_00982 PF00004 ATPase family associated with various cellular activities (AAA) SynA1544_00982 PF01434 Peptidase family M41 SynA1544_00982 PF06480 FtsH Extracellular SynA1544_00983 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SynA1544_00983 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SynA1544_00986 PF01726 LexA DNA binding domain SynA1544_00986 PF00717 Peptidase S24-like SynA1544_01006 PF01042 Endoribonuclease L-PSP SynA1544_01007 PF00753 Metallo-beta-lactamase superfamily SynA1544_01007 PF16123 Hydroxyacylglutathione hydrolase C-terminus SynA1544_01008 PF01634 ATP phosphoribosyltransferase SynA1544_01009 PF00005 ABC transporter SynA1544_01009 PF00664 ABC transporter transmembrane region SynA1544_01010 PF00583 Acetyltransferase (GNAT) family SynA1544_01013 PF13180 PDZ domain SynA1544_01014 PF08299 Bacterial dnaA protein helix-turn-helix SynA1544_01014 PF00308 Bacterial dnaA protein SynA1544_01014 PF11638 DnaA N-terminal domain SynA1544_01018 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SynA1544_01018 PF07992 Pyridine nucleotide-disulphide oxidoreductase SynA1544_01019 PF05199 GMC oxidoreductase SynA1544_01019 PF00732 GMC oxidoreductase SynA1544_01020 PF00510 Cytochrome c oxidase subunit III SynA1544_01021 PF00115 Cytochrome C and Quinol oxidase polypeptide I SynA1544_01022 PF00116 Cytochrome C oxidase subunit II, periplasmic domain SynA1544_01022 PF02790 Cytochrome C oxidase subunit II, transmembrane domain SynA1544_01025 PF01699 Sodium/calcium exchanger protein SynA1544_01026 PF01740 STAS domain SynA1544_01026 PF00916 Sulfate permease family SynA1544_01027 PF01979 Amidohydrolase family SynA1544_01030 PF10716 NADH dehydrogenase transmembrane subunit SynA1544_01032 PF00290 Tryptophan synthase alpha chain SynA1544_01035 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SynA1544_01043 PF04539 Sigma-70 region 3 SynA1544_01043 PF00140 Sigma-70 factor, region 1.2 SynA1544_01043 PF04545 Sigma-70, region 4 SynA1544_01043 PF04542 Sigma-70 region 2 SynA1544_01047 PF01502 Phosphoribosyl-AMP cyclohydrolase SynA1544_01047 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase SynA1544_01049 PF07724 AAA domain (Cdc48 subfamily) SynA1544_01049 PF00004 ATPase family associated with various cellular activities (AAA) SynA1544_01049 PF17871 AAA lid domain SynA1544_01049 PF02861 Clp amino terminal domain, pathogenicity island component SynA1544_01049 PF10431 C-terminal, D2-small domain, of ClpB protein SynA1544_01054 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SynA1544_01055 PF00127 Copper binding proteins, plastocyanin/azurin family SynA1544_01057 PF01208 Uroporphyrinogen decarboxylase (URO-D) SynA1544_01058 PF00128 Alpha amylase, catalytic domain SynA1544_01058 PF02806 Alpha amylase, C-terminal all-beta domain SynA1544_01058 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SynA1544_01063 PF10726 Protein of function (DUF2518) SynA1544_01065 PF00480 ROK family SynA1544_01066 PF00171 Aldehyde dehydrogenase family SynA1544_01069 PF01432 Peptidase family M3 SynA1544_01070 PF00361 Proton-conducting membrane transporter SynA1544_01071 PF08544 GHMP kinases C terminal SynA1544_01071 PF00288 GHMP kinases N terminal domain SynA1544_01072 PF02685 Glucokinase SynA1544_01074 PF03129 Anticodon binding domain SynA1544_01074 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SynA1544_01074 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SynA1544_01077 PF00579 tRNA synthetases class I (W and Y) SynA1544_01080 PF01545 Cation efflux family SynA1544_01080 PF16916 Dimerisation domain of Zinc Transporter SynA1544_01082 PF00124 Photosynthetic reaction centre protein SynA1544_01088 PF01202 Shikimate kinase SynA1544_01105 PF01165 Ribosomal protein S21 SynA1544_01123 PF00355 Rieske [2Fe-2S] domain SynA1544_01123 PF00848 Ring hydroxylating alpha subunit (catalytic domain) SynA1544_01124 PF00005 ABC transporter SynA1544_01125 PF00528 Binding-protein-dependent transport system inner membrane component SynA1544_01127 PF02492 CobW/HypB/UreG, nucleotide-binding domain SynA1544_01128 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA SynA1544_01129 PF00491 Arginase family SynA1544_01139 PF00106 short chain dehydrogenase SynA1544_01140 PF00684 DnaJ central domain SynA1544_01140 PF01556 DnaJ C terminal domain SynA1544_01140 PF00226 DnaJ domain SynA1544_01162 PF18030 RimK PreATP-grasp domain SynA1544_01162 PF08443 RimK-like ATP-grasp domain SynA1544_01172 PF00665 Integrase core domain SynA1544_01179 PF13276 HTH-like domain SynA1544_01179 PF00665 Integrase core domain SynA1544_01179 PF13333 Integrase core domain SynA1544_01183 PF01966 HD domain SynA1544_01184 PF05721 Phytanoyl-CoA dioxygenase (PhyH) SynA1544_01185 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SynA1544_01185 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SynA1544_01186 PF00528 Binding-protein-dependent transport system inner membrane component SynA1544_01188 PF00005 ABC transporter SynA1544_01220 PF01758 Sodium Bile acid symporter family SynA1544_01223 PF00581 Rhodanese-like domain SynA1544_01224 PF00581 Rhodanese-like domain SynA1544_01224 PF11127 Protein of unknown function (DUF2892) SynA1544_01231 PF04539 Sigma-70 region 3 SynA1544_01231 PF00140 Sigma-70 factor, region 1.2 SynA1544_01231 PF04542 Sigma-70 region 2 SynA1544_01231 PF04545 Sigma-70, region 4 SynA1544_01238 PF00665 Integrase core domain SynA1544_01243 PF02915 Rubrerythrin SynA1544_01246 PF11266 Long-chain fatty aldehyde decarbonylase SynA1544_01251 PF00871 Acetokinase family SynA1544_01252 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase SynA1544_01252 PF09363 XFP C-terminal domain SynA1544_01252 PF09364 XFP N-terminal domain SynA1544_01253 PF01126 Heme oxygenase SynA1544_01254 PF04055 Radical SAM superfamily SynA1544_01254 PF06969 HemN C-terminal domain SynA1544_01256 PF00158 Sigma-54 interaction domain SynA1544_01256 PF13426 PAS domain SynA1544_01256 PF02954 Bacterial regulatory protein, Fis family SynA1544_01263 PF07731 Multicopper oxidase SynA1544_01263 PF07732 Multicopper oxidase SynA1544_01266 PF00989 PAS fold SynA1544_01266 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SynA1544_01266 PF00512 His Kinase A (phospho-acceptor) domain SynA1544_01267 PF00486 Transcriptional regulatory protein, C terminal SynA1544_01267 PF00072 Response regulator receiver domain SynA1544_01269 PF00873 AcrB/AcrD/AcrF family SynA1544_01274 PF10502 Signal peptidase, peptidase S26 SynA1544_01275 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SynA1544_01275 PF16582 Middle domain of thiamine pyrophosphate SynA1544_01275 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SynA1544_01276 PF00378 Enoyl-CoA hydratase/isomerase SynA1544_01277 PF01476 LysM domain SynA1544_01277 PF03734 L,D-transpeptidase catalytic domain SynA1544_01278 PF00534 Glycosyl transferases group 1 SynA1544_01278 PF08323 Starch synthase catalytic domain SynA1544_01280 PF08245 Mur ligase middle domain SynA1544_01280 PF02875 Mur ligase family, glutamate ligase domain SynA1544_01280 PF01225 Mur ligase family, catalytic domain SynA1544_01281 PF12804 MobA-like NTP transferase domain SynA1544_01281 PF00132 Bacterial transferase hexapeptide (six repeats) SynA1544_01283 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SynA1544_01284 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase SynA1544_01285 PF04029 2-phosphosulpholactate phosphatase SynA1544_01286 PF00795 Carbon-nitrogen hydrolase SynA1544_01287 PF01520 N-acetylmuramoyl-L-alanine amidase SynA1544_01288 PF01177 Asp/Glu/Hydantoin racemase SynA1544_01289 PF00348 Polyprenyl synthetase SynA1544_01290 PF13419 Haloacid dehalogenase-like hydrolase SynA1544_01291 PF16177 Acetyl-coenzyme A synthetase N-terminus SynA1544_01291 PF00501 AMP-binding enzyme SynA1544_01291 PF13193 AMP-binding enzyme C-terminal domain SynA1544_01293 PF00578 AhpC/TSA family SynA1544_01294 PF07733 Bacterial DNA polymerase III alpha NTPase domain SynA1544_01294 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SynA1544_01294 PF14579 Helix-hairpin-helix motif SynA1544_01294 PF00929 Exonuclease SynA1544_01294 PF02811 PHP domain SynA1544_01296 PF12849 PBP superfamily domain SynA1544_01297 PF12849 PBP superfamily domain SynA1544_01298 PF13545 Crp-like helix-turn-helix domain SynA1544_01303 PF01625 Peptide methionine sulfoxide reductase SynA1544_01307 PF00005 ABC transporter SynA1544_01307 PF00664 ABC transporter transmembrane region SynA1544_01308 PF00591 Glycosyl transferase family, a/b domain SynA1544_01308 PF02885 Glycosyl transferase family, helical bundle domain SynA1544_01309 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain SynA1544_01309 PF00117 Glutamine amidotransferase class-I SynA1544_01311 PF00636 Ribonuclease III domain SynA1544_01312 PF00588 SpoU rRNA Methylase family SynA1544_01312 PF08032 RNA 2'-O ribose methyltransferase substrate binding SynA1544_01314 PF01425 Amidase SynA1544_01315 PF01336 OB-fold nucleic acid binding domain SynA1544_01315 PF14579 Helix-hairpin-helix motif SynA1544_01315 PF02811 PHP domain SynA1544_01315 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SynA1544_01315 PF07733 Bacterial DNA polymerase III alpha NTPase domain SynA1544_01317 PF00312 Ribosomal protein S15 SynA1544_01318 PF07499 RuvA, C-terminal domain SynA1544_01318 PF01330 RuvA N terminal domain SynA1544_01320 PF00892 EamA-like transporter family SynA1544_01321 PF10410 DnaB-helicase binding domain of primase SynA1544_01321 PF08275 DNA primase catalytic core, N-terminal domain SynA1544_01321 PF01807 CHC2 zinc finger SynA1544_01338 PF04760 Translation initiation factor IF-2, N-terminal region SynA1544_01338 PF00009 Elongation factor Tu GTP binding domain SynA1544_01338 PF11987 Translation-initiation factor 2 SynA1544_01339 PF00565 Staphylococcal nuclease homologue SynA1544_01340 PF11799 impB/mucB/samB family C-terminal domain SynA1544_01340 PF00817 impB/mucB/samB family SynA1544_01340 PF13438 Domain of unknown function (DUF4113) SynA1544_01341 PF00717 Peptidase S24-like SynA1544_01346 PF02590 Predicted SPOUT methyltransferase SynA1544_01350 PF02021 Uncharacterised protein family UPF0102 SynA1544_01351 PF00398 Ribosomal RNA adenine dimethylase SynA1544_01352 PF00288 GHMP kinases N terminal domain SynA1544_01352 PF08544 GHMP kinases C terminal SynA1544_01355 PF02779 Transketolase, pyrimidine binding domain SynA1544_01355 PF00364 Biotin-requiring enzyme SynA1544_01355 PF02780 Transketolase, C-terminal domain SynA1544_01356 PF07549 SecD/SecF GG Motif SynA1544_01356 PF02355 Protein export membrane protein SynA1544_01357 PF02355 Protein export membrane protein SynA1544_01362 PF01594 AI-2E family transporter SynA1544_01363 PF03912 Psb28 protein SynA1544_01365 PF16416 ARM-like repeat domain, GUN4-N terminal SynA1544_01365 PF05419 GUN4-like SynA1544_01371 PF01209 ubiE/COQ5 methyltransferase family SynA1544_01372 PF00120 Glutamine synthetase, catalytic domain SynA1544_01372 PF03951 Glutamine synthetase, beta-Grasp domain SynA1544_01373 PF00502 Phycobilisome protein SynA1544_01374 PF00266 Aminotransferase class-V SynA1544_01375 PF14437 MafB19-like deaminase SynA1544_01376 PF00282 Pyridoxal-dependent decarboxylase conserved domain SynA1544_01378 PF01252 Signal peptidase (SPase) II SynA1544_01381 PF00675 Insulinase (Peptidase family M16) SynA1544_01381 PF05193 Peptidase M16 inactive domain SynA1544_01382 PF00675 Insulinase (Peptidase family M16) SynA1544_01382 PF05193 Peptidase M16 inactive domain SynA1544_01383 PF05996 Ferredoxin-dependent bilin reductase SynA1544_01386 PF00005 ABC transporter SynA1544_01388 PF00535 Glycosyl transferase family 2 SynA1544_01389 PF00318 Ribosomal protein S2 SynA1544_01390 PF00889 Elongation factor TS SynA1544_01392 PF17191 RecG wedge domain SynA1544_01392 PF00271 Helicase conserved C-terminal domain SynA1544_01392 PF00270 DEAD/DEAH box helicase SynA1544_01393 PF01427 D-ala-D-ala dipeptidase SynA1544_01394 PF01077 Nitrite and sulphite reductase 4Fe-4S domain SynA1544_01394 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain SynA1544_01395 PF02092 Glycyl-tRNA synthetase beta subunit SynA1544_01397 PF01494 FAD binding domain SynA1544_01399 PF12392 Collagenase SynA1544_01399 PF01136 Peptidase family U32 SynA1544_01400 PF14492 Elongation Factor G, domain II SynA1544_01400 PF00009 Elongation factor Tu GTP binding domain SynA1544_01400 PF00679 Elongation factor G C-terminus SynA1544_01400 PF03144 Elongation factor Tu domain 2 SynA1544_01403 PF00005 ABC transporter SynA1544_01405 PF01578 Cytochrome C assembly protein SynA1544_01410 PF00834 Ribulose-phosphate 3 epimerase family SynA1544_01411 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded SynA1544_01412 PF01488 Shikimate / quinate 5-dehydrogenase SynA1544_01412 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain SynA1544_01412 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain SynA1544_01413 PF00483 Nucleotidyl transferase SynA1544_01414 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SynA1544_01414 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain SynA1544_01415 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SynA1544_01418 PF00920 Dehydratase family SynA1544_01421 PF00805 Pentapeptide repeats (8 copies) SynA1544_01422 PF02492 CobW/HypB/UreG, nucleotide-binding domain SynA1544_01422 PF07683 Cobalamin synthesis protein cobW C-terminal domain SynA1544_01426 PF00106 short chain dehydrogenase SynA1544_01427 PF03641 Possible lysine decarboxylase SynA1544_01428 PF00106 short chain dehydrogenase SynA1544_01436 PF17975 Ribonucleotide reductase alpha domain SynA1544_01437 PF08241 Methyltransferase domain SynA1544_01438 PF00009 Elongation factor Tu GTP binding domain SynA1544_01438 PF16658 Class II release factor RF3, C-terminal domain SynA1544_01441 PF01430 Hsp33 protein SynA1544_01442 PF00005 ABC transporter SynA1544_01447 PF01940 Integral membrane protein DUF92 SynA1544_01448 PF04542 Sigma-70 region 2 SynA1544_01448 PF03979 Sigma-70 factor, region 1.1 SynA1544_01448 PF04539 Sigma-70 region 3 SynA1544_01448 PF04545 Sigma-70, region 4 SynA1544_01448 PF00140 Sigma-70 factor, region 1.2 SynA1544_01453 PF00005 ABC transporter SynA1544_01455 PF00155 Aminotransferase class I and II SynA1544_01457 PF03167 Uracil DNA glycosylase superfamily SynA1544_01458 PF04551 GcpE protein SynA1544_01459 PF03572 Peptidase family S41 SynA1544_01459 PF00595 PDZ domain SynA1544_01461 PF03461 TRCF domain SynA1544_01461 PF17757 UvrB interaction domain SynA1544_01461 PF00270 DEAD/DEAH box helicase SynA1544_01461 PF02559 CarD-like/TRCF domain SynA1544_01461 PF00271 Helicase conserved C-terminal domain SynA1544_01469 PF03741 Integral membrane protein TerC family SynA1544_01472 PF00551 Formyl transferase SynA1544_01472 PF02911 Formyl transferase, C-terminal domain SynA1544_01474 PF01523 Putative modulator of DNA gyrase SynA1544_01475 PF01523 Putative modulator of DNA gyrase SynA1544_01476 PF02915 Rubrerythrin SynA1544_01479 PF02441 Flavoprotein SynA1544_01480 PF08206 Ribonuclease B OB domain SynA1544_01480 PF00575 S1 RNA binding domain SynA1544_01480 PF00773 RNB domain SynA1544_01480 PF17876 Cold shock domain SynA1544_01482 PF01169 Uncharacterized protein family UPF0016 SynA1544_01484 PF05969 Photosystem II complex subunit Ycf12 SynA1544_01485 PF17768 RecJ OB domain SynA1544_01485 PF02272 DHHA1 domain SynA1544_01485 PF01368 DHH family SynA1544_01485 PF10141 Single-strand DNA-specific exonuclease, C terminal domain SynA1544_01486 PF13419 Haloacid dehalogenase-like hydrolase SynA1544_01489 PF01783 Ribosomal L32p protein family SynA1544_01490 PF01434 Peptidase family M41 SynA1544_01490 PF06480 FtsH Extracellular SynA1544_01490 PF17862 AAA+ lid domain SynA1544_01490 PF00004 ATPase family associated with various cellular activities (AAA) SynA1544_01491 PF03699 Uncharacterised protein family (UPF0182) SynA1544_01492 PF10417 C-terminal domain of 1-Cys peroxiredoxin SynA1544_01492 PF00578 AhpC/TSA family SynA1544_01495 PF01551 Peptidase family M23 SynA1544_01495 PF08525 Opacity-associated protein A N-terminal motif SynA1544_01495 PF01476 LysM domain SynA1544_01496 PF00588 SpoU rRNA Methylase family SynA1544_01498 PF03040 CemA family SynA1544_01503 PF09334 tRNA synthetases class I (M) SynA1544_01503 PF08264 Anticodon-binding domain of tRNA SynA1544_01503 PF00133 tRNA synthetases class I (I, L, M and V) SynA1544_01505 PF00773 RNB domain SynA1544_01506 PF01084 Ribosomal protein S18 SynA1544_01507 PF00471 Ribosomal protein L33 SynA1544_01508 PF03483 B3/4 domain SynA1544_01508 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain SynA1544_01508 PF01588 Putative tRNA binding domain SynA1544_01508 PF03147 Ferredoxin-fold anticodon binding domain SynA1544_01508 PF03484 tRNA synthetase B5 domain SynA1544_01509 PF13847 Methyltransferase domain SynA1544_01510 PF00502 Phycobilisome protein SynA1544_01517 PF04545 Sigma-70, region 4 SynA1544_01517 PF04542 Sigma-70 region 2 SynA1544_01517 PF00140 Sigma-70 factor, region 1.2 SynA1544_01517 PF04539 Sigma-70 region 3 SynA1544_01519 PF08486 Stage II sporulation protein SynA1544_01520 PF00106 short chain dehydrogenase SynA1544_01524 PF02310 B12 binding domain SynA1544_01524 PF02607 B12 binding domain SynA1544_01524 PF02965 Vitamin B12 dependent methionine synthase, activation domain SynA1544_01524 PF02574 Homocysteine S-methyltransferase SynA1544_01524 PF00809 Pterin binding enzyme SynA1544_01525 PF01063 Amino-transferase class IV SynA1544_01526 PF02514 CobN/Magnesium Chelatase SynA1544_01529 PF03653 Uncharacterised protein family (UPF0093) SynA1544_01530 PF04244 Deoxyribodipyrimidine photo-lyase-related protein SynA1544_01532 PF12826 Helix-hairpin-helix motif SynA1544_01532 PF08459 UvrC Helix-hairpin-helix N-terminal SynA1544_01532 PF01541 GIY-YIG catalytic domain SynA1544_01532 PF02151 UvrB/uvrC motif SynA1544_01534 PF01467 Cytidylyltransferase-like SynA1544_01536 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family SynA1544_01539 PF00266 Aminotransferase class-V SynA1544_01540 PF01678 Diaminopimelate epimerase SynA1544_01542 PF00133 tRNA synthetases class I (I, L, M and V) SynA1544_01542 PF09334 tRNA synthetases class I (M) SynA1544_01542 PF13603 Leucyl-tRNA synthetase, Domain 2 SynA1544_01542 PF08264 Anticodon-binding domain of tRNA SynA1544_01543 PF00342 Phosphoglucose isomerase SynA1544_01545 PF01914 MarC family integral membrane protein SynA1544_01556 PF00551 Formyl transferase SynA1544_01557 PF02774 Semialdehyde dehydrogenase, dimerisation domain SynA1544_01557 PF01118 Semialdehyde dehydrogenase, NAD binding domain SynA1544_01558 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase SynA1544_01558 PF00925 GTP cyclohydrolase II SynA1544_01559 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SynA1544_01560 PF01048 Phosphorylase superfamily SynA1544_01561 PF13580 SIS domain SynA1544_01563 PF00226 DnaJ domain SynA1544_01563 PF01556 DnaJ C terminal domain SynA1544_01564 PF00012 Hsp70 protein SynA1544_01565 PF00528 Binding-protein-dependent transport system inner membrane component SynA1544_01566 PF00528 Binding-protein-dependent transport system inner membrane component SynA1544_01567 PF00005 ABC transporter SynA1544_01570 PF00459 Inositol monophosphatase family SynA1544_01571 PF13393 Histidyl-tRNA synthetase SynA1544_01573 PF00183 Hsp90 protein SynA1544_01573 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SynA1544_01574 PF00830 Ribosomal L28 family SynA1544_01575 PF00578 AhpC/TSA family SynA1544_01576 PF00982 Glycosyltransferase family 20 SynA1544_01577 PF01547 Bacterial extracellular solute-binding protein SynA1544_01578 PF00528 Binding-protein-dependent transport system inner membrane component SynA1544_01579 PF00528 Binding-protein-dependent transport system inner membrane component SynA1544_01580 PF00005 ABC transporter SynA1544_01580 PF08402 TOBE domain SynA1544_01581 PF12849 PBP superfamily domain SynA1544_01583 PF10693 Protein of unknown function (DUF2499) SynA1544_01585 PF01241 Photosystem I psaG / psaK SynA1544_01586 PF18113 Rubredoxin binding C-terminal domain SynA1544_01586 PF07992 Pyridine nucleotide-disulphide oxidoreductase SynA1544_01587 PF02780 Transketolase, C-terminal domain SynA1544_01587 PF02779 Transketolase, pyrimidine binding domain SynA1544_01587 PF13292 1-deoxy-D-xylulose-5-phosphate synthase SynA1544_01588 PF00585 C-terminal regulatory domain of Threonine dehydratase SynA1544_01588 PF00291 Pyridoxal-phosphate dependent enzyme SynA1544_01590 PF02325 YGGT family SynA1544_01593 PF00224 Pyruvate kinase, barrel domain SynA1544_01593 PF02887 Pyruvate kinase, alpha/beta domain SynA1544_01593 PF00391 PEP-utilising enzyme, mobile domain SynA1544_01594 PF00005 ABC transporter SynA1544_01594 PF02687 FtsX-like permease family SynA1544_01594 PF12704 MacB-like periplasmic core domain SynA1544_01595 PF00004 ATPase family associated with various cellular activities (AAA) SynA1544_01595 PF17862 AAA+ lid domain SynA1544_01595 PF06480 FtsH Extracellular SynA1544_01595 PF01434 Peptidase family M41 SynA1544_01597 PF00574 Clp protease SynA1544_01598 PF11264 Thylakoid formation protein SynA1544_01601 PF03742 PetN SynA1544_01602 PF02617 ATP-dependent Clp protease adaptor protein ClpS SynA1544_01608 PF02222 ATP-grasp domain SynA1544_01608 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain SynA1544_01609 PF00528 Binding-protein-dependent transport system inner membrane component SynA1544_01610 PF01761 3-dehydroquinate synthase SynA1544_01616 PF02445 Quinolinate synthetase A protein SynA1544_01622 PF04679 ATP dependent DNA ligase C terminal region SynA1544_01622 PF01068 ATP dependent DNA ligase domain SynA1544_01622 PF04675 DNA ligase N terminus SynA1544_01623 PF00270 DEAD/DEAH box helicase SynA1544_01623 PF08494 DEAD/H associated SynA1544_01623 PF00271 Helicase conserved C-terminal domain SynA1544_01643 PF01209 ubiE/COQ5 methyltransferase family SynA1544_01650 PF00005 ABC transporter SynA1544_01653 PF00950 ABC 3 transport family SynA1544_01655 PF00005 ABC transporter SynA1544_01656 PF01297 Zinc-uptake complex component A periplasmic SynA1544_01657 PF10576 Iron-sulfur binding domain of endonuclease III SynA1544_01657 PF00633 Helix-hairpin-helix motif SynA1544_01657 PF00730 HhH-GPD superfamily base excision DNA repair protein SynA1544_01658 PF00111 2Fe-2S iron-sulfur cluster binding domain SynA1544_01662 PF00485 Phosphoribulokinase / Uridine kinase family SynA1544_01681 PF00080 Copper/zinc superoxide dismutase (SODC) SynA1544_01685 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) SynA1544_01687 PF00535 Glycosyl transferase family 2 SynA1544_01690 PF02696 Uncharacterized ACR, YdiU/UPF0061 family SynA1544_01704 PF00067 Cytochrome P450 SynA1544_01710 PF01168 Alanine racemase, N-terminal domain SynA1544_01717 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SynA1544_01717 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SynA1544_01718 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SynA1544_01718 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SynA1544_01727 PF00176 SNF2 family N-terminal domain SynA1544_01727 PF00271 Helicase conserved C-terminal domain SynA1544_01731 PF00270 DEAD/DEAH box helicase SynA1544_01731 PF00271 Helicase conserved C-terminal domain SynA1544_01731 PF09369 Domain of unknown function (DUF1998) SynA1544_01732 PF13361 UvrD-like helicase C-terminal domain SynA1544_01732 PF00580 UvrD/REP helicase N-terminal domain SynA1544_01741 PF01230 HIT domain SynA1544_01746 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system SynA1544_01754 PF02661 Fic/DOC family SynA1544_01761 PF00293 NUDIX domain SynA1544_01769 PF13495 Phage integrase, N-terminal SAM-like domain SynA1544_01769 PF00589 Phage integrase family SynA1544_01790 PF01934 Protein of unknown function DUF86 SynA1544_01799 PF05552 Conserved TM helix SynA1544_01799 PF00924 Mechanosensitive ion channel SynA1544_01800 PF00067 Cytochrome P450 SynA1544_01802 PF00465 Iron-containing alcohol dehydrogenase SynA1544_01805 PF00067 Cytochrome P450 SynA1544_01806 PF00067 Cytochrome P450 SynA1544_01808 PF00872 Transposase, Mutator family SynA1544_01809 PF00872 Transposase, Mutator family SynA1544_01817 PF02136 Nuclear transport factor 2 (NTF2) domain SynA1544_01817 PF09150 Orange carotenoid protein, N-terminal SynA1544_01818 PF00487 Fatty acid desaturase SynA1544_01819 PF18032 Photoprotection regulator fluorescence recovery protein SynA1544_01821 PF02562 PhoH-like protein SynA1544_01821 PF13638 PIN domain SynA1544_01844 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SynA1544_01878 PF00196 Bacterial regulatory proteins, luxR family SynA1544_01878 PF00072 Response regulator receiver domain SynA1544_01893 PF00395 S-layer homology domain SynA1544_01893 PF04966 Carbohydrate-selective porin, OprB family SynA1544_01895 PF13640 2OG-Fe(II) oxygenase superfamily SynA1544_01896 PF13416 Bacterial extracellular solute-binding protein SynA1544_01899 PF04966 Carbohydrate-selective porin, OprB family SynA1544_01899 PF00395 S-layer homology domain SynA1544_01901 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SynA1544_01910 PF05378 Hydantoinase/oxoprolinase N-terminal region SynA1544_01910 PF01968 Hydantoinase/oxoprolinase SynA1544_01911 PF03773 Predicted permease SynA1544_01916 PF00005 ABC transporter SynA1544_01917 PF00950 ABC 3 transport family SynA1544_01922 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SynA1544_01922 PF14572 Phosphoribosyl synthetase-associated domain SynA1544_01925 PF01370 NAD dependent epimerase/dehydratase family SynA1544_01926 PF02446 4-alpha-glucanotransferase SynA1544_01927 PF01479 S4 domain SynA1544_01927 PF00849 RNA pseudouridylate synthase SynA1544_01928 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SynA1544_01928 PF00512 His Kinase A (phospho-acceptor) domain SynA1544_01928 PF00989 PAS fold SynA1544_01929 PF00486 Transcriptional regulatory protein, C terminal SynA1544_01929 PF00072 Response regulator receiver domain SynA1544_01931 PF03109 ABC1 family SynA1544_01932 PF01276 Orn/Lys/Arg decarboxylase, major domain SynA1544_01932 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain SynA1544_01933 PF03330 Lytic transglycolase SynA1544_01936 PF12697 Alpha/beta hydrolase family SynA1544_01937 PF00465 Iron-containing alcohol dehydrogenase SynA1544_01938 PF07724 AAA domain (Cdc48 subfamily) SynA1544_01938 PF10431 C-terminal, D2-small domain, of ClpB protein SynA1544_01938 PF02861 Clp amino terminal domain, pathogenicity island component SynA1544_01938 PF17871 AAA lid domain SynA1544_01938 PF00004 ATPase family associated with various cellular activities (AAA) SynA1544_01940 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SynA1544_01940 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SynA1544_01941 PF02457 DisA bacterial checkpoint controller nucleotide-binding SynA1544_01942 PF01255 Putative undecaprenyl diphosphate synthase SynA1544_01943 PF06968 Biotin and Thiamin Synthesis associated domain SynA1544_01943 PF04055 Radical SAM superfamily SynA1544_01945 PF00581 Rhodanese-like domain SynA1544_01945 PF17773 UPF0176 acylphosphatase like domain SynA1544_01948 PF04055 Radical SAM superfamily SynA1544_01949 PF02132 RecR protein SynA1544_01949 PF13662 Toprim domain SynA1544_01952 PF00582 Universal stress protein family SynA1544_01952 PF00999 Sodium/hydrogen exchanger family SynA1544_01953 PF00664 ABC transporter transmembrane region SynA1544_01953 PF00005 ABC transporter SynA1544_01955 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) SynA1544_01958 PF00270 DEAD/DEAH box helicase SynA1544_01958 PF03880 DbpA RNA binding domain SynA1544_01958 PF00271 Helicase conserved C-terminal domain SynA1544_01959 PF01050 Mannose-6-phosphate isomerase SynA1544_01959 PF00483 Nucleotidyl transferase SynA1544_01960 PF13538 UvrD-like helicase C-terminal domain SynA1544_01961 PF13361 UvrD-like helicase C-terminal domain SynA1544_01961 PF00580 UvrD/REP helicase N-terminal domain SynA1544_01961 PF12705 PD-(D/E)XK nuclease superfamily SynA1544_01964 PF17946 RecC C-terminal domain SynA1544_01965 PF00149 Calcineurin-like phosphoesterase SynA1544_01967 PF10674 Protein of unknown function (DUF2488) SynA1544_01968 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ SynA1544_01971 PF01722 BolA-like protein SynA1544_01973 PF00462 Glutaredoxin SynA1544_01975 PF00072 Response regulator receiver domain SynA1544_01975 PF00486 Transcriptional regulatory protein, C terminal SynA1544_01983 PF01134 Glucose inhibited division protein A SynA1544_01984 PF06298 Photosystem II protein Y (PsbY) SynA1544_01985 PF00132 Bacterial transferase hexapeptide (six repeats) SynA1544_02012 PF00850 Histone deacetylase domain SynA1544_02020 PF00665 Integrase core domain SynA1544_02022 PF13333 Integrase core domain SynA1544_02022 PF13276 HTH-like domain SynA1544_02022 PF00665 Integrase core domain SynA1544_02038 PF00149 Calcineurin-like phosphoesterase SynA1544_02041 PF01475 Ferric uptake regulator family SynA1544_02047 PF09506 Glucosylglycerol-phosphate phosphatase (Salt_tol_Pase) SynA1544_02058 PF01053 Cys/Met metabolism PLP-dependent enzyme SynA1544_02059 PF04204 Homoserine O-succinyltransferase SynA1544_02066 PF00005 ABC transporter SynA1544_02067 PF00528 Binding-protein-dependent transport system inner membrane component SynA1544_02068 PF00528 Binding-protein-dependent transport system inner membrane component SynA1544_02069 PF00497 Bacterial extracellular solute-binding proteins, family 3 SynA1544_02071 PF00916 Sulfate permease family SynA1544_02071 PF01740 STAS domain SynA1544_02073 PF01903 CbiX SynA1544_02076 PF05199 GMC oxidoreductase SynA1544_02076 PF00732 GMC oxidoreductase SynA1544_02081 PF11780 Protein of unknown function (DUF3318) SynA1544_02082 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SynA1544_02082 PF02142 MGS-like domain SynA1544_02082 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SynA1544_02084 PF01235 Sodium:alanine symporter family SynA1544_02086 PF00005 ABC transporter SynA1544_02086 PF00664 ABC transporter transmembrane region SynA1544_02087 PF00121 Triosephosphate isomerase SynA1544_02088 PF00809 Pterin binding enzyme SynA1544_02091 PF02514 CobN/Magnesium Chelatase SynA1544_02091 PF11965 Domain of unknown function (DUF3479) SynA1544_02092 PF01113 Dihydrodipicolinate reductase, N-terminus SynA1544_02092 PF05173 Dihydrodipicolinate reductase, C-terminus SynA1544_02094 PF00762 Ferrochelatase SynA1544_02095 PF01494 FAD binding domain SynA1544_02097 PF00156 Phosphoribosyl transferase domain SynA1544_02102 PF00486 Transcriptional regulatory protein, C terminal SynA1544_02102 PF00072 Response regulator receiver domain SynA1544_02104 PF03976 Polyphosphate kinase 2 (PPK2) SynA1544_02108 PF13533 Biotin-lipoyl like SynA1544_02109 PF00873 AcrB/AcrD/AcrF family SynA1544_02112 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SynA1544_02112 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SynA1544_02113 PF01022 Bacterial regulatory protein, arsR family SynA1544_02115 PF00924 Mechanosensitive ion channel SynA1544_02118 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase SynA1544_02120 PF02016 LD-carboxypeptidase N-terminal domain SynA1544_02120 PF17676 LD-carboxypeptidase C-terminal domain SynA1544_02122 PF01116 Fructose-bisphosphate aldolase class-II SynA1544_02123 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SynA1544_02123 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SynA1544_02125 PF01039 Carboxyl transferase domain SynA1544_02125 PF17848 Acetyl-coA carboxylase zinc finger domain SynA1544_02126 PF06750 Bacterial Peptidase A24 N-terminal domain SynA1544_02126 PF01478 Type IV leader peptidase family SynA1544_02128 PF00485 Phosphoribulokinase / Uridine kinase family SynA1544_02129 PF00180 Isocitrate/isopropylmalate dehydrogenase SynA1544_02130 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD SynA1544_02130 PF00132 Bacterial transferase hexapeptide (six repeats) SynA1544_02131 PF00696 Amino acid kinase family SynA1544_02131 PF01472 PUA domain SynA1544_02134 PF03652 Holliday junction resolvase SynA1544_02138 PF12452 Protein of unknown function (DUF3685) SynA1544_02138 PF00072 Response regulator receiver domain SynA1544_02139 PF01475 Ferric uptake regulator family SynA1544_02140 PF00977 Histidine biosynthesis protein SynA1544_02142 PF01066 CDP-alcohol phosphatidyltransferase SynA1544_02143 PF00571 CBS domain SynA1544_02143 PF00478 IMP dehydrogenase / GMP reductase domain SynA1544_02148 PF00111 2Fe-2S iron-sulfur cluster binding domain SynA1544_02151 PF00692 dUTPase SynA1544_02165 PF00520 Ion transport protein SynA1544_02165 PF00027 Cyclic nucleotide-binding domain SynA1544_02167 PF00462 Glutaredoxin SynA1544_02171 PF01593 Flavin containing amine oxidoreductase SynA1544_02180 PF11940 Domain of unknown function (DUF3458) Ig-like fold SynA1544_02180 PF01433 Peptidase family M1 domain SynA1544_02180 PF17432 Domain of unknown function (DUF3458_C) ARM repeats SynA1544_02183 PF07689 KaiB domain SynA1544_02183 PF00512 His Kinase A (phospho-acceptor) domain SynA1544_02183 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SynA1544_02186 PF01383 CpcD/allophycocyanin linker domain SynA1544_02186 PF00970 Oxidoreductase FAD-binding domain SynA1544_02186 PF00175 Oxidoreductase NAD-binding domain SynA1544_02188 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain SynA1544_02188 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain SynA1544_02190 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain SynA1544_02190 PF07685 CobB/CobQ-like glutamine amidotransferase domain SynA1544_02191 PF00708 Acylphosphatase SynA1544_02195 PF13538 UvrD-like helicase C-terminal domain SynA1544_02197 PF00348 Polyprenyl synthetase SynA1544_02199 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain SynA1544_02199 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain SynA1544_02200 PF07698 7TM receptor with intracellular HD hydrolase SynA1544_02200 PF01966 HD domain SynA1544_02200 PF07697 7TM-HD extracellular SynA1544_02201 PF00849 RNA pseudouridylate synthase SynA1544_02203 PF01910 Thiamine-binding protein SynA1544_02209 PF00528 Binding-protein-dependent transport system inner membrane component SynA1544_02210 PF00682 HMGL-like SynA1544_02210 PF08502 LeuA allosteric (dimerisation) domain SynA1544_02211 PF09210 Domain of unknown function (DUF1957) SynA1544_02211 PF03065 Glycosyl hydrolase family 57 SynA1544_02213 PF00521 DNA gyrase/topoisomerase IV, subunit A SynA1544_02213 PF03989 DNA gyrase C-terminal domain, beta-propeller SynA1544_02214 PF14159 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase SynA1544_02214 PF00749 tRNA synthetases class I (E and Q), catalytic domain SynA1544_02215 PF00478 IMP dehydrogenase / GMP reductase domain SynA1544_02216 PF00085 Thioredoxin SynA1544_02217 PF00117 Glutamine amidotransferase class-I SynA1544_02219 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SynA1544_02220 PF00588 SpoU rRNA Methylase family SynA1544_02223 PF01078 Magnesium chelatase, subunit ChlI SynA1544_02223 PF17863 AAA lid domain SynA1544_02224 PF02075 Crossover junction endodeoxyribonuclease RuvC SynA1544_02225 PF01812 5-formyltetrahydrofolate cyclo-ligase family SynA1544_02227 PF02657 Fe-S metabolism associated domain SynA1544_02228 PF01842 ACT domain SynA1544_02228 PF00742 Homoserine dehydrogenase SynA1544_02228 PF03447 Homoserine dehydrogenase, NAD binding domain SynA1544_02230 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SynA1544_02231 PF00528 Binding-protein-dependent transport system inner membrane component SynA1544_02235 PF01926 50S ribosome-binding GTPase SynA1544_02235 PF06071 Protein of unknown function (DUF933) SynA1544_02236 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SynA1544_02237 PF01612 3'-5' exonuclease SynA1544_02237 PF01367 5'-3' exonuclease, C-terminal SAM fold SynA1544_02237 PF00476 DNA polymerase family A SynA1544_02237 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SynA1544_02238 PF01406 tRNA synthetases class I (C) catalytic domain SynA1544_02238 PF09190 DALR domain SynA1544_02240 PF00535 Glycosyl transferase family 2 SynA1544_02243 PF00209 Sodium:neurotransmitter symporter family SynA1544_02244 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain SynA1544_02244 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase SynA1544_02244 PF13288 DXP reductoisomerase C-terminal domain SynA1544_02248 PF02233 NAD(P) transhydrogenase beta subunit SynA1544_02249 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch SynA1544_02249 PF01262 Alanine dehydrogenase/PNT, C-terminal domain SynA1544_02249 PF05222 Alanine dehydrogenase/PNT, N-terminal domain SynA1544_02250 PF01262 Alanine dehydrogenase/PNT, C-terminal domain SynA1544_02250 PF05222 Alanine dehydrogenase/PNT, N-terminal domain SynA1544_02255 PF07992 Pyridine nucleotide-disulphide oxidoreductase SynA1544_02256 PF01176 Translation initiation factor 1A / IF-1 SynA1544_02258 PF00849 RNA pseudouridylate synthase SynA1544_02259 PF13847 Methyltransferase domain SynA1544_02262 PF08041 PetM family of cytochrome b6f complex subunit 7 SynA1544_02264 PF00561 alpha/beta hydrolase fold SynA1544_02265 PF10369 Small subunit of acetolactate synthase SynA1544_02266 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SynA1544_02267 PF02392 Ycf4 SynA1544_02268 PF00124 Photosynthetic reaction centre protein SynA1544_02269 PF00421 Photosystem II protein SynA1544_02270 PF01053 Cys/Met metabolism PLP-dependent enzyme SynA1544_02271 PF01053 Cys/Met metabolism PLP-dependent enzyme SynA1544_02272 PF00291 Pyridoxal-phosphate dependent enzyme SynA1544_02273 PF02547 Queuosine biosynthesis protein SynA1544_02274 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SynA1544_02274 PF00364 Biotin-requiring enzyme SynA1544_02274 PF02817 e3 binding domain SynA1544_02276 PF00501 AMP-binding enzyme SynA1544_02277 PF03099 Biotin/lipoate A/B protein ligase family SynA1544_02278 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus SynA1544_02278 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein SynA1544_02279 PF01791 DeoC/LacD family aldolase SynA1544_02280 PF02565 Recombination protein O C terminal SynA1544_02280 PF11967 Recombination protein O N terminal SynA1544_02282 PF00534 Glycosyl transferases group 1 SynA1544_02282 PF13439 Glycosyltransferase Family 4 SynA1544_02283 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family SynA1544_02286 PF03079 ARD/ARD' family SynA1544_02287 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SynA1544_02288 PF14748 Pyrroline-5-carboxylate reductase dimerisation SynA1544_02288 PF03807 NADP oxidoreductase coenzyme F420-dependent SynA1544_02289 PF04472 Cell division protein SepF SynA1544_02290 PF01168 Alanine racemase, N-terminal domain SynA1544_02292 PF02361 Cobalt transport protein SynA1544_02293 PF01926 50S ribosome-binding GTPase SynA1544_02293 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal SynA1544_02294 PF17964 Bacterial Ig domain SynA1544_02294 PF03734 L,D-transpeptidase catalytic domain SynA1544_02297 PF01207 Dihydrouridine synthase (Dus) SynA1544_02298 PF00535 Glycosyl transferase family 2 SynA1544_02299 PF00483 Nucleotidyl transferase SynA1544_02300 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase SynA1544_02301 PF04321 RmlD substrate binding domain SynA1544_02302 PF16363 GDP-mannose 4,6 dehydratase SynA1544_02303 PF14307 Glycosyltransferase WbsX SynA1544_02303 PF05045 Rhamnan synthesis protein F SynA1544_02308 PF00206 Lyase SynA1544_02308 PF10415 Fumarase C C-terminus SynA1544_02309 PF00270 DEAD/DEAH box helicase SynA1544_02309 PF08148 DSHCT (NUC185) domain SynA1544_02309 PF00271 Helicase conserved C-terminal domain SynA1544_02312 PF01758 Sodium Bile acid symporter family SynA1544_02313 PF00155 Aminotransferase class I and II SynA1544_02319 PF00202 Aminotransferase class-III SynA1544_02322 PF02527 rRNA small subunit methyltransferase G SynA1544_02330 PF04055 Radical SAM superfamily SynA1544_02331 PF00762 Ferrochelatase SynA1544_02332 PF04998 RNA polymerase Rpb1, domain 5 SynA1544_02332 PF05000 RNA polymerase Rpb1, domain 4 SynA1544_02332 PF04983 RNA polymerase Rpb1, domain 3 SynA1544_02333 PF04997 RNA polymerase Rpb1, domain 1 SynA1544_02333 PF00623 RNA polymerase Rpb1, domain 2 SynA1544_02333 PF04983 RNA polymerase Rpb1, domain 3 SynA1544_02334 PF00562 RNA polymerase Rpb2, domain 6 SynA1544_02334 PF04560 RNA polymerase Rpb2, domain 7 SynA1544_02334 PF10385 RNA polymerase beta subunit external 1 domain SynA1544_02334 PF04565 RNA polymerase Rpb2, domain 3 SynA1544_02334 PF04561 RNA polymerase Rpb2, domain 2 SynA1544_02334 PF04563 RNA polymerase beta subunit SynA1544_02335 PF01026 TatD related DNase SynA1544_02336 PF01649 Ribosomal protein S20 SynA1544_02337 PF00815 Histidinol dehydrogenase SynA1544_02338 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) SynA1544_02339 PF13180 PDZ domain SynA1544_02342 PF04055 Radical SAM superfamily SynA1544_02345 PF02576 RimP N-terminal domain SynA1544_02346 PF08529 NusA N-terminal domain SynA1544_02346 PF13184 NusA-like KH domain SynA1544_02346 PF00575 S1 RNA binding domain SynA1544_02348 PF11987 Translation-initiation factor 2 SynA1544_02348 PF04760 Translation initiation factor IF-2, N-terminal region SynA1544_02348 PF00009 Elongation factor Tu GTP binding domain SynA1544_02354 PF02910 Fumarate reductase flavoprotein C-term SynA1544_02354 PF00890 FAD binding domain SynA1544_02360 PF00749 tRNA synthetases class I (E and Q), catalytic domain SynA1544_02362 PF00216 Bacterial DNA-binding protein SynA1544_02364 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SynA1544_02364 PF00128 Alpha amylase, catalytic domain SynA1544_02370 PF13333 Integrase core domain SynA1544_02370 PF00665 Integrase core domain SynA1544_02370 PF13276 HTH-like domain SynA1544_02374 PF00211 Adenylate and Guanylate cyclase catalytic domain SynA1544_02377 PF00872 Transposase, Mutator family SynA1544_02388 PF00005 ABC transporter SynA1544_02388 PF00664 ABC transporter transmembrane region SynA1544_02388 PF03412 Peptidase C39 family SynA1544_02390 PF00664 ABC transporter transmembrane region SynA1544_02390 PF03412 Peptidase C39 family SynA1544_02390 PF00005 ABC transporter SynA1544_02392 PF00872 Transposase, Mutator family SynA1544_02399 PF02934 GatB/GatE catalytic domain SynA1544_02399 PF02934 GatB/GatE catalytic domain SynA1544_02399 PF02637 GatB domain SynA1544_02399 PF02637 GatB domain SynA1544_02400 PF01266 FAD dependent oxidoreductase SynA1544_02401 PF13276 HTH-like domain SynA1544_02401 PF13333 Integrase core domain SynA1544_02401 PF00665 Integrase core domain SynA1544_02409 PF01850 PIN domain SynA1544_02414 PF00271 Helicase conserved C-terminal domain SynA1544_02414 PF00176 SNF2 family N-terminal domain SynA1544_02434 PF00570 HRDC domain SynA1544_02434 PF13361 UvrD-like helicase C-terminal domain SynA1544_02435 PF00005 ABC transporter SynA1544_02436 PF00343 Carbohydrate phosphorylase SynA1544_02437 PF12437 Glutamine synthetase type III N terminal SynA1544_02437 PF00120 Glutamine synthetase, catalytic domain SynA1544_02437 PF18318 Glutamine synthetase C-terminal domain SynA1544_02446 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SynA1544_02456 PF02492 CobW/HypB/UreG, nucleotide-binding domain SynA1544_02456 PF07683 Cobalamin synthesis protein cobW C-terminal domain SynA1544_02472 PF00343 Carbohydrate phosphorylase SynA1544_02476 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system SynA1544_02478 PF05973 Phage derived protein Gp49-like (DUF891) SynA1544_02495 PF13657 HipA N-terminal domain SynA1544_02495 PF07804 HipA-like C-terminal domain SynA1544_02498 PF14338 Mrr N-terminal domain SynA1544_02498 PF04471 Restriction endonuclease SynA1544_02520 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system SynA1544_02547 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system SynA1544_02558 PF02405 Permease MlaE SynA1544_02561 PF02660 Glycerol-3-phosphate acyltransferase SynA1544_02562 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SynA1544_02563 PF00579 tRNA synthetases class I (W and Y) SynA1544_02565 PF00072 Response regulator receiver domain SynA1544_02565 PF00196 Bacterial regulatory proteins, luxR family SynA1544_02568 PF00883 Cytosol aminopeptidase family, catalytic domain SynA1544_02568 PF02789 Cytosol aminopeptidase family, N-terminal domain SynA1544_02577 PF01625 Peptide methionine sulfoxide reductase SynA1544_02578 PF02684 Lipid-A-disaccharide synthetase SynA1544_02579 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 SynA1544_02579 PF00132 Bacterial transferase hexapeptide (six repeats) SynA1544_02580 PF07977 FabA-like domain SynA1544_02581 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase SynA1544_02583 PF01259 SAICAR synthetase SynA1544_02585 PF02844 Phosphoribosylglycinamide synthetase, N domain SynA1544_02585 PF02843 Phosphoribosylglycinamide synthetase, C domain SynA1544_02585 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain SynA1544_02586 PF00512 His Kinase A (phospho-acceptor) domain SynA1544_02586 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SynA1544_02586 PF00672 HAMP domain SynA1544_02586 PF00989 PAS fold SynA1544_02587 PF06745 KaiC SynA1544_02588 PF07689 KaiB domain SynA1544_02589 PF07688 KaiA C-terminal domain SynA1544_02590 PF00829 Ribosomal prokaryotic L21 protein SynA1544_02591 PF01016 Ribosomal L27 protein SynA1544_02593 PF01509 TruB family pseudouridylate synthase (N terminal domain) SynA1544_02593 PF16198 tRNA pseudouridylate synthase B C-terminal domain SynA1544_02594 PF01709 Transcriptional regulator SynA1544_02599 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SynA1544_02600 PF08486 Stage II sporulation protein SynA1544_02600 PF04122 Putative cell wall binding repeat 2 SynA1544_02601 PF12706 Beta-lactamase superfamily domain SynA1544_02602 PF14495 Cytochrome c-550 domain SynA1544_02604 PF00111 2Fe-2S iron-sulfur cluster binding domain SynA1544_02606 PF01842 ACT domain SynA1544_02606 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SynA1544_02606 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SynA1544_02610 PF08245 Mur ligase middle domain SynA1544_02610 PF02875 Mur ligase family, glutamate ligase domain SynA1544_02615 PF01192 RNA polymerase Rpb6 SynA1544_02617 PF00012 Hsp70 protein SynA1544_02620 PF00156 Phosphoribosyl transferase domain SynA1544_02621 PF01676 Metalloenzyme superfamily SynA1544_02621 PF06415 BPG-independent PGAM N-terminus (iPGM_N) SynA1544_02633 PF00118 TCP-1/cpn60 chaperonin family SynA1544_02634 PF00166 Chaperonin 10 Kd subunit SynA1544_02636 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SynA1544_02636 PF02874 ATP synthase alpha/beta family, beta-barrel domain SynA1544_02637 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain SynA1544_02637 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain SynA1544_02638 PF04839 Plastid and cyanobacterial ribosomal protein (PSRP-3 / Ycf65) SynA1544_02640 PF00557 Metallopeptidase family M24 SynA1544_02640 PF05195 Aminopeptidase P, N-terminal domain SynA1544_02641 PF01595 Cyclin M transmembrane N-terminal domain SynA1544_02641 PF00571 CBS domain SynA1544_02642 PF12631 MnmE helical domain SynA1544_02642 PF01926 50S ribosome-binding GTPase SynA1544_02642 PF10396 GTP-binding protein TrmE N-terminus SynA1544_02643 PF01467 Cytidylyltransferase-like SynA1544_02644 PF00795 Carbon-nitrogen hydrolase SynA1544_02644 PF02540 NAD synthase SynA1544_02647 PF05222 Alanine dehydrogenase/PNT, N-terminal domain SynA1544_02647 PF01262 Alanine dehydrogenase/PNT, C-terminal domain SynA1544_02648 PF02810 SEC-C motif SynA1544_02649 PF11805 Protein of unknown function (DUF3326) SynA1544_02651 PF00111 2Fe-2S iron-sulfur cluster binding domain SynA1544_02653 PF00231 ATP synthase SynA1544_02654 PF00306 ATP synthase alpha/beta chain, C terminal domain SynA1544_02654 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SynA1544_02654 PF02874 ATP synthase alpha/beta family, beta-barrel domain SynA1544_02655 PF00213 ATP synthase delta (OSCP) subunit SynA1544_02656 PF00430 ATP synthase B/B' CF(0) SynA1544_02657 PF00430 ATP synthase B/B' CF(0) SynA1544_02658 PF00137 ATP synthase subunit C SynA1544_02659 PF00119 ATP synthase A chain SynA1544_02661 PF13847 Methyltransferase domain SynA1544_02662 PF00427 Phycobilisome Linker polypeptide SynA1544_02662 PF00502 Phycobilisome protein SynA1544_02663 PF00502 Phycobilisome protein SynA1544_02664 PF00502 Phycobilisome protein SynA1544_02665 PF01383 CpcD/allophycocyanin linker domain SynA1544_02666 PF01728 FtsJ-like methyltransferase SynA1544_02666 PF01479 S4 domain SynA1544_02668 PF01098 Cell cycle protein SynA1544_02671 PF05140 ResB-like family SynA1544_02674 PF14489 QueF-like protein SynA1544_02675 PF00543 Nitrogen regulatory protein P-II SynA1544_02684 PF05140 ResB-like family SynA1544_02686 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system SynA1544_02694 PF14489 QueF-like protein SynA1544_02695 PF00543 Nitrogen regulatory protein P-II SynA1544_02696 PF02719 Polysaccharide biosynthesis protein SynA1544_02697 PF02719 Polysaccharide biosynthesis protein SynA1544_02700 PF00293 NUDIX domain SynA1544_02703 PF13579 Glycosyl transferase 4-like domain SynA1544_02703 PF00534 Glycosyl transferases group 1 SynA1544_02704 PF01850 PIN domain SynA1544_02707 PF02397 Bacterial sugar transferase SynA1544_02712 PF00872 Transposase, Mutator family SynA1544_02724 PF01370 NAD dependent epimerase/dehydratase family SynA1544_02725 PF16363 GDP-mannose 4,6 dehydratase SynA1544_02726 PF16363 GDP-mannose 4,6 dehydratase SynA1544_02727 PF18412 Outer-membrane lipoprotein Wza C-terminal domain SynA1544_02727 PF10531 SLBB domain SynA1544_02727 PF02563 Polysaccharide biosynthesis/export protein SynA1544_02728 PF13614 AAA domain SynA1544_02733 PF08323 Starch synthase catalytic domain SynA1544_02733 PF00534 Glycosyl transferases group 1 SynA1544_02735 PF14307 Glycosyltransferase WbsX SynA1544_02735 PF05045 Rhamnan synthesis protein F SynA1544_02740 PF00664 ABC transporter transmembrane region SynA1544_02740 PF00005 ABC transporter SynA1544_02740 PF03412 Peptidase C39 family SynA1544_02745 PF00534 Glycosyl transferases group 1 SynA1544_02745 PF13439 Glycosyltransferase Family 4 SynA1544_02749 PF10397 Adenylosuccinate lyase C-terminus SynA1544_02749 PF00206 Lyase SynA1544_02752 PF00550 Phosphopantetheine attachment site SynA1544_02753 PF02801 Beta-ketoacyl synthase, C-terminal domain SynA1544_02753 PF00109 Beta-ketoacyl synthase, N-terminal domain SynA1544_02754 PF05159 Capsule polysaccharide biosynthesis protein SynA1544_02755 PF05159 Capsule polysaccharide biosynthesis protein SynA1544_02756 PF02348 Cytidylyltransferase SynA1544_02760 PF08666 SAF domain SynA1544_02760 PF03102 NeuB family SynA1544_02777 PF01914 MarC family integral membrane protein SynA1544_02790 PF01170 Putative RNA methylase family UPF0020 SynA1544_02790 PF02926 THUMP domain SynA1544_02791 PF02080 TrkA-C domain SynA1544_02791 PF00999 Sodium/hydrogen exchanger family SynA1544_02791 PF03471 Transporter associated domain SynA1544_02795 PF02463 RecF/RecN/SMC N terminal domain SynA1544_02795 PF06470 SMC proteins Flexible Hinge Domain SynA1544_02797 PF01641 SelR domain SynA1544_02800 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SynA1544_02800 PF00289 Biotin carboxylase, N-terminal domain SynA1544_02800 PF02785 Biotin carboxylase C-terminal domain SynA1544_02802 PF06596 Photosystem II reaction centre X protein (PsbX) SynA1544_02803 PF07444 Ycf66 protein N-terminus SynA1544_02806 PF00762 Ferrochelatase SynA1544_02807 PF00005 ABC transporter SynA1544_02807 PF06472 ABC transporter transmembrane region 2 SynA1544_02808 PF01230 HIT domain SynA1544_02809 PF01078 Magnesium chelatase, subunit ChlI SynA1544_02809 PF13335 Magnesium chelatase, subunit ChlI C-terminal SynA1544_02813 PF01327 Polypeptide deformylase SynA1544_02814 PF00326 Prolyl oligopeptidase family SynA1544_02815 PF00266 Aminotransferase class-V SynA1544_02816 PF01458 Uncharacterized protein family (UPF0051) SynA1544_02817 PF00005 ABC transporter SynA1544_02818 PF01458 Uncharacterized protein family (UPF0051) SynA1544_02819 PF02943 Ferredoxin thioredoxin reductase catalytic beta chain SynA1544_02822 PF09367 CpeS-like protein SynA1544_02823 PF00427 Phycobilisome Linker polypeptide SynA1544_02827 PF13847 Methyltransferase domain SynA1544_02831 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SynA1544_02831 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SynA1544_02831 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SynA1544_02831 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SynA1544_02833 PF00873 AcrB/AcrD/AcrF family SynA1544_02835 PF16193 AAA C-terminal domain SynA1544_02835 PF12002 MgsA AAA+ ATPase C terminal SynA1544_02835 PF05496 Holliday junction DNA helicase RuvB P-loop domain SynA1544_02838 PF00578 AhpC/TSA family SynA1544_02839 PF03309 Type III pantothenate kinase SynA1544_02840 PF01507 Phosphoadenosine phosphosulfate reductase family SynA1544_02841 PF07992 Pyridine nucleotide-disulphide oxidoreductase SynA1544_02842 PF13167 GTP-binding GTPase N-terminal SynA1544_02842 PF16360 GTP-binding GTPase Middle Region SynA1544_02842 PF01926 50S ribosome-binding GTPase SynA1544_02843 PF03600 Citrate transporter SynA1544_02843 PF02080 TrkA-C domain SynA1544_02844 PF02386 Cation transport protein SynA1544_02845 PF02254 TrkA-N domain SynA1544_02845 PF02080 TrkA-C domain SynA1544_02846 PF03702 Anhydro-N-acetylmuramic acid kinase SynA1544_02851 PF16326 ABC transporter C-terminal domain SynA1544_02851 PF12848 ABC transporter SynA1544_02851 PF00005 ABC transporter SynA1544_02853 PF13180 PDZ domain SynA1544_02856 PF08482 ATP-dependent helicase C-terminal SynA1544_02856 PF00271 Helicase conserved C-terminal domain SynA1544_02856 PF04408 Helicase associated domain (HA2) SynA1544_02856 PF00270 DEAD/DEAH box helicase SynA1544_02857 PF00270 DEAD/DEAH box helicase SynA1544_02857 PF04408 Helicase associated domain (HA2) SynA1544_02857 PF08482 ATP-dependent helicase C-terminal SynA1544_02857 PF00271 Helicase conserved C-terminal domain SynA1544_02858 PF08482 ATP-dependent helicase C-terminal SynA1544_02858 PF00271 Helicase conserved C-terminal domain SynA1544_02858 PF04408 Helicase associated domain (HA2) SynA1544_02858 PF00270 DEAD/DEAH box helicase SynA1544_02861 PF02601 Exonuclease VII, large subunit SynA1544_02861 PF13742 OB-fold nucleic acid binding domain SynA1544_02872 PF00459 Inositol monophosphatase family SynA1544_02875 PF02673 Bacitracin resistance protein BacA SynA1544_02877 PF06514 Photosystem II 12 kDa extrinsic protein (PsbU) SynA1544_02878 PF00890 FAD binding domain SynA1544_02878 PF02910 Fumarate reductase flavoprotein C-term SynA1544_02879 PF07884 Vitamin K epoxide reductase family SynA1544_02880 PF00919 Uncharacterized protein family UPF0004 SynA1544_02880 PF18693 TRAM domain SynA1544_02880 PF04055 Radical SAM superfamily SynA1544_02881 PF07690 Major Facilitator Superfamily SynA1544_02882 PF13282 Domain of unknown function (DUF4070) SynA1544_02882 PF04055 Radical SAM superfamily SynA1544_02882 PF02310 B12 binding domain SynA1544_02883 PF14251 Domain of unknown function (DUF4346) SynA1544_02887 PF01202 Shikimate kinase SynA1544_02892 PF02033 Ribosome-binding factor A SynA1544_02893 PF00933 Glycosyl hydrolase family 3 N terminal domain SynA1544_02893 PF01915 Glycosyl hydrolase family 3 C-terminal domain SynA1544_02894 PF00535 Glycosyl transferase family 2 SynA1544_02894 PF13181 Tetratricopeptide repeat SynA1544_02895 PF02602 Uroporphyrinogen-III synthase HemD SynA1544_02898 PF01593 Flavin containing amine oxidoreductase SynA1544_02899 PF01521 Iron-sulphur cluster biosynthesis SynA1544_02903 PF01370 NAD dependent epimerase/dehydratase family SynA1544_02903 PF08338 Domain of unknown function (DUF1731) SynA1544_02904 PF11910 Cyanobacterial and plant NDH-1 subunit O SynA1544_02906 PF01556 DnaJ C terminal domain SynA1544_02906 PF00684 DnaJ central domain SynA1544_02906 PF00226 DnaJ domain SynA1544_02907 PF00291 Pyridoxal-phosphate dependent enzyme SynA1544_02908 PF04966 Carbohydrate-selective porin, OprB family SynA1544_02908 PF00395 S-layer homology domain SynA1544_02909 PF04966 Carbohydrate-selective porin, OprB family SynA1544_02909 PF00395 S-layer homology domain SynA1544_02912 PF00535 Glycosyl transferase family 2 SynA1544_02917 PF00124 Photosynthetic reaction centre protein SynA1544_02919 PF00005 ABC transporter SynA1544_02921 PF00072 Response regulator receiver domain SynA1544_02921 PF00486 Transcriptional regulatory protein, C terminal SynA1544_02924 PF09115 DNA polymerase III, delta subunit, C terminal SynA1544_02925 PF02223 Thymidylate kinase SynA1544_02926 PF00403 Heavy-metal-associated domain SynA1544_02928 PF18073 Rubredoxin metal binding domain SynA1544_02928 PF06745 KaiC SynA1544_02929 PF00072 Response regulator receiver domain SynA1544_02929 PF00486 Transcriptional regulatory protein, C terminal SynA1544_02930 PF02504 Fatty acid synthesis protein SynA1544_02931 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SynA1544_02931 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SynA1544_02932 PF00698 Acyl transferase domain SynA1544_02933 PF01553 Acyltransferase SynA1544_02933 PF13193 AMP-binding enzyme C-terminal domain SynA1544_02933 PF00501 AMP-binding enzyme SynA1544_02935 PF00814 Glycoprotease family SynA1544_02937 PF01743 Poly A polymerase head domain SynA1544_02938 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) SynA1544_02940 PF01593 Flavin containing amine oxidoreductase SynA1544_02941 PF10664 Cyanobacterial and plastid NDH-1 subunit M SynA1544_02943 PF03466 LysR substrate binding domain SynA1544_02943 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SynA1544_02945 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus SynA1544_02945 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus SynA1544_02945 PF00361 Proton-conducting membrane transporter SynA1544_02946 PF00361 Proton-conducting membrane transporter SynA1544_02949 PF00483 Nucleotidyl transferase SynA1544_02951 PF00072 Response regulator receiver domain SynA1544_02951 PF00196 Bacterial regulatory proteins, luxR family SynA1544_02954 PF01513 ATP-NAD kinase SynA1544_02955 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L SynA1544_02956 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 SynA1544_02957 PF13237 4Fe-4S dicluster domain SynA1544_02958 PF00146 NADH dehydrogenase SynA1544_02959 PF00285 Citrate synthase, C-terminal domain SynA1544_02962 PF17773 UPF0176 acylphosphatase like domain SynA1544_02962 PF00581 Rhodanese-like domain SynA1544_02963 PF01628 HrcA protein C terminal domain SynA1544_02964 PF00291 Pyridoxal-phosphate dependent enzyme SynA1544_02965 PF01253 Translation initiation factor SUI1 SynA1544_02971 PF01594 AI-2E family transporter SynA1544_02973 PF00731 AIR carboxylase SynA1544_02975 PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus SynA1544_02976 PF00704 Glycosyl hydrolases family 18 SynA1544_02976 PF08329 Chitinase A, N-terminal domain SynA1544_02977 PF00849 RNA pseudouridylate synthase SynA1544_02978 PF00072 Response regulator receiver domain SynA1544_02978 PF00486 Transcriptional regulatory protein, C terminal SynA1544_02980 PF00266 Aminotransferase class-V SynA1544_02981 PF01795 MraW methylase family SynA1544_02982 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit SynA1544_02986 PF13193 AMP-binding enzyme C-terminal domain SynA1544_02986 PF00501 AMP-binding enzyme SynA1544_02988 PF01040 UbiA prenyltransferase family SynA1544_02989 PF00425 chorismate binding enzyme SynA1544_02990 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain SynA1544_02990 PF02951 Prokaryotic glutathione synthetase, N-terminal domain SynA1544_02991 PF00462 Glutaredoxin SynA1544_02992 PF00472 RF-1 domain SynA1544_02992 PF03462 PCRF domain SynA1544_02994 PF02130 Uncharacterized protein family UPF0054 SynA1544_02995 PF01219 Prokaryotic diacylglycerol kinase SynA1544_02996 PF00117 Glutamine amidotransferase class-I SynA1544_02998 PF00710 Asparaginase, N-terminal SynA1544_02998 PF17763 Glutaminase/Asparaginase C-terminal domain SynA1544_02999 PF00155 Aminotransferase class I and II SynA1544_03001 PF00750 tRNA synthetases class I (R) SynA1544_03001 PF05746 DALR anticodon binding domain SynA1544_03001 PF03485 Arginyl tRNA synthetase N terminal domain SynA1544_03002 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain SynA1544_03002 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain SynA1544_03003 PF10396 GTP-binding protein TrmE N-terminus SynA1544_03003 PF01926 50S ribosome-binding GTPase SynA1544_03003 PF12631 MnmE helical domain SynA1544_03005 PF02824 TGS domain SynA1544_03005 PF04607 Region found in RelA / SpoT proteins SynA1544_03005 PF13291 ACT domain SynA1544_03006 PF00005 ABC transporter SynA1544_03006 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SynA1544_03008 PF01479 S4 domain SynA1544_03008 PF00849 RNA pseudouridylate synthase SynA1544_03009 PF01926 50S ribosome-binding GTPase SynA1544_03010 PF00162 Phosphoglycerate kinase SynA1544_03013 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase SynA1544_03013 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SynA1544_03015 PF03033 Glycosyltransferase family 28 N-terminal domain SynA1544_03015 PF04101 Glycosyltransferase family 28 C-terminal domain SynA1544_03016 PF00155 Aminotransferase class I and II SynA1544_03018 PF03958 Bacterial type II/III secretion system short domain SynA1544_03018 PF00263 Bacterial type II and III secretion system protein SynA1544_03022 PF01180 Dihydroorotate dehydrogenase SynA1544_03023 PF00075 RNase H SynA1544_03025 PF16320 Ribosomal protein L7/L12 dimerisation domain SynA1544_03025 PF00542 Ribosomal protein L7/L12 C-terminal domain SynA1544_03026 PF00466 Ribosomal protein L10 SynA1544_03027 PF00687 Ribosomal protein L1p/L10e family SynA1544_03028 PF00298 Ribosomal protein L11, RNA binding domain SynA1544_03028 PF03946 Ribosomal protein L11, N-terminal domain SynA1544_03029 PF00467 KOW motif SynA1544_03029 PF02357 Transcription termination factor nusG SynA1544_03030 PF00584 SecE/Sec61-gamma subunits of protein translocation complex SynA1544_03031 PF02861 Clp amino terminal domain, pathogenicity island component SynA1544_03031 PF10431 C-terminal, D2-small domain, of ClpB protein SynA1544_03031 PF00004 ATPase family associated with various cellular activities (AAA) SynA1544_03031 PF07724 AAA domain (Cdc48 subfamily) SynA1544_03031 PF17871 AAA lid domain SynA1544_03032 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SynA1544_03033 PF00113 Enolase, C-terminal TIM barrel domain SynA1544_03033 PF03952 Enolase, N-terminal domain SynA1544_03034 PF03109 ABC1 family SynA1544_03041 PF01960 ArgJ family SynA1544_03042 PF01121 Dephospho-CoA kinase SynA1544_03045 PF02934 GatB/GatE catalytic domain SynA1544_03045 PF02637 GatB domain SynA1544_03046 PF05690 Thiazole biosynthesis protein ThiG SynA1544_03046 PF01266 FAD dependent oxidoreductase SynA1544_03047 PF00334 Nucleoside diphosphate kinase SynA1544_03048 PF17944 Arginine decarboxylase C-terminal helical extension SynA1544_03048 PF17810 Arginine decarboxylase helical bundle domain SynA1544_03048 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SynA1544_03049 PF01411 tRNA synthetases class II (A) SynA1544_03049 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SynA1544_03049 PF02272 DHHA1 domain SynA1544_03051 PF00176 SNF2 family N-terminal domain SynA1544_03051 PF12419 SNF2 Helicase protein SynA1544_03051 PF00271 Helicase conserved C-terminal domain SynA1544_03054 PF00011 Hsp20/alpha crystallin family SynA1544_03056 PF01613 Flavin reductase like domain SynA1544_03056 PF00753 Metallo-beta-lactamase superfamily SynA1544_03058 PF01613 Flavin reductase like domain SynA1544_03058 PF00258 Flavodoxin SynA1544_03059 PF00301 Rubredoxin SynA1544_03061 PF17954 Quercetinase C-terminal cupin domain SynA1544_03061 PF02678 Pirin SynA1544_03064 PF02347 Glycine cleavage system P-protein SynA1544_03065 PF01597 Glycine cleavage H-protein SynA1544_03066 PF06838 Methionine gamma-lyase SynA1544_03068 PF01281 Ribosomal protein L9, N-terminal domain SynA1544_03068 PF03948 Ribosomal protein L9, C-terminal domain SynA1544_03069 PF00772 DnaB-like helicase N terminal domain SynA1544_03069 PF14528 LAGLIDADG-like domain SynA1544_03069 PF03796 DnaB-like helicase C terminal domain SynA1544_03069 PF14528 LAGLIDADG-like domain SynA1544_03069 PF03796 DnaB-like helicase C terminal domain SynA1544_03069 PF00772 DnaB-like helicase N terminal domain SynA1544_03070 PF01134 Glucose inhibited division protein A SynA1544_03070 PF13932 GidA associated domain SynA1544_03077 PF01653 NAD-dependent DNA ligase adenylation domain SynA1544_03077 PF00533 BRCA1 C Terminus (BRCT) domain SynA1544_03077 PF12826 Helix-hairpin-helix motif SynA1544_03077 PF03119 NAD-dependent DNA ligase C4 zinc finger domain SynA1544_03077 PF03120 NAD-dependent DNA ligase OB-fold domain SynA1544_03079 PF09335 SNARE associated Golgi protein SynA1544_03082 PF00005 ABC transporter SynA1544_03083 PF08264 Anticodon-binding domain of tRNA SynA1544_03083 PF00133 tRNA synthetases class I (I, L, M and V) SynA1544_03083 PF10458 Valyl tRNA synthetase tRNA binding arm SynA1544_03089 PF00106 short chain dehydrogenase SynA1544_03099 PF03819 MazG nucleotide pyrophosphohydrolase domain SynA1544_03100 PF03462 PCRF domain SynA1544_03100 PF00472 RF-1 domain SynA1544_03101 PF17284 Spermidine synthase tetramerisation domain SynA1544_03102 PF00491 Arginase family SynA1544_03105 PF01571 Aminomethyltransferase folate-binding domain SynA1544_03105 PF08669 Glycine cleavage T-protein C-terminal barrel domain SynA1544_03106 PF02938 GAD domain SynA1544_03106 PF00152 tRNA synthetases class II (D, K and N) SynA1544_03106 PF01336 OB-fold nucleic acid binding domain SynA1544_03107 PF00140 Sigma-70 factor, region 1.2 SynA1544_03107 PF04542 Sigma-70 region 2 SynA1544_03107 PF04539 Sigma-70 region 3 SynA1544_03107 PF04545 Sigma-70, region 4 SynA1544_03108 PF06418 CTP synthase N-terminus SynA1544_03108 PF00117 Glutamine amidotransferase class-I SynA1544_03109 PF04055 Radical SAM superfamily SynA1544_03110 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase SynA1544_03110 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SynA1544_03111 PF06508 Queuosine biosynthesis protein QueC SynA1544_03112 PF04715 Anthranilate synthase component I, N terminal region SynA1544_03112 PF00425 chorismate binding enzyme SynA1544_03115 PF00128 Alpha amylase, catalytic domain SynA1544_03116 PF00535 Glycosyl transferase family 2 SynA1544_03121 PF00005 ABC transporter SynA1544_03122 PF12399 Branched-chain amino acid ATP-binding cassette transporter SynA1544_03122 PF00005 ABC transporter SynA1544_03124 PF02653 Branched-chain amino acid transport system / permease component SynA1544_03125 PF13458 Periplasmic binding protein SynA1544_03126 PF02492 CobW/HypB/UreG, nucleotide-binding domain SynA1544_03127 PF01730 UreF SynA1544_03128 PF02814 UreE urease accessory protein, N-terminal domain SynA1544_03128 PF05194 UreE urease accessory protein, C-terminal domain SynA1544_03129 PF01774 UreD urease accessory protein SynA1544_03130 PF00547 Urease, gamma subunit SynA1544_03131 PF00699 Urease beta subunit SynA1544_03132 PF01979 Amidohydrolase family SynA1544_03132 PF00449 Urease alpha-subunit, N-terminal domain SynA1544_03133 PF00117 Glutamine amidotransferase class-I SynA1544_03133 PF02540 NAD synthase SynA1544_03133 PF00958 GMP synthase C terminal domain SynA1544_03137 PF01546 Peptidase family M20/M25/M40 SynA1544_03138 PF13537 Glutamine amidotransferase domain SynA1544_03138 PF00733 Asparagine synthase SynA1544_03139 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SynA1544_03139 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SynA1544_03141 PF00474 Sodium:solute symporter family SynA1544_03143 PF14403 Circularly permuted ATP-grasp type 2 SynA1544_03148 PF06463 Molybdenum Cofactor Synthesis C SynA1544_03148 PF04055 Radical SAM superfamily SynA1544_03149 PF12804 MobA-like NTP transferase domain SynA1544_03151 PF07690 Major Facilitator Superfamily SynA1544_03152 PF01568 Molydopterin dinucleotide binding domain SynA1544_03152 PF00384 Molybdopterin oxidoreductase SynA1544_03152 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SynA1544_03155 PF00484 Carbonic anhydrase SynA1544_03156 PF01967 MoaC family SynA1544_03157 PF03454 MoeA C-terminal region (domain IV) SynA1544_03157 PF00994 Probable molybdopterin binding domain SynA1544_03157 PF03453 MoeA N-terminal region (domain I and II) SynA1544_03160 PF02391 MoaE protein SynA1544_03162 PF00994 Probable molybdopterin binding domain SynA1544_03163 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SynA1544_03165 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain SynA1544_03165 PF01077 Nitrite and sulphite reductase 4Fe-4S domain SynA1544_03167 PF01226 Formate/nitrite transporter SynA1544_03169 PF02560 Cyanate lyase C-terminal domain SynA1544_03172 PF00591 Glycosyl transferase family, a/b domain SynA1544_03172 PF02885 Glycosyl transferase family, helical bundle domain SynA1544_03174 PF07690 Major Facilitator Superfamily SynA1544_03175 PF13089 Polyphosphate kinase N-terminal domain SynA1544_03175 PF02503 Polyphosphate kinase middle domain SynA1544_03175 PF13090 Polyphosphate kinase C-terminal domain 2 SynA1544_03175 PF17941 Polyphosphate kinase C-terminal domain 1 SynA1544_03177 PF00140 Sigma-70 factor, region 1.2 SynA1544_03177 PF04539 Sigma-70 region 3 SynA1544_03177 PF04545 Sigma-70, region 4 SynA1544_03177 PF04542 Sigma-70 region 2 SynA1544_03179 PF00793 DAHP synthetase I family SynA1544_03180 PF06434 Aconitate hydratase 2 N-terminus SynA1544_03180 PF11791 Aconitate B N-terminal domain SynA1544_03180 PF00330 Aconitase family (aconitate hydratase) SynA1544_03181 PF00654 Voltage gated chloride channel SynA1544_03182 PF00082 Subtilase family SynA1544_03182 PF01483 Proprotein convertase P-domain SynA1544_03186 PF01842 ACT domain SynA1544_03186 PF00551 Formyl transferase SynA1544_03188 PF01266 FAD dependent oxidoreductase SynA1544_03189 PF00012 Hsp70 protein SynA1544_03190 PF08501 Shikimate dehydrogenase substrate binding domain SynA1544_03190 PF18317 Shikimate 5'-dehydrogenase C-terminal domain SynA1544_03192 PF01250 Ribosomal protein S6 SynA1544_03194 PF00764 Arginosuccinate synthase SynA1544_03197 PF00953 Glycosyl transferase family 4 SynA1544_03197 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 SynA1544_03203 PF01476 LysM domain SynA1544_03203 PF03734 L,D-transpeptidase catalytic domain SynA1544_03204 PF02222 ATP-grasp domain SynA1544_03205 PF00534 Glycosyl transferases group 1 SynA1544_03205 PF00862 Sucrose synthase SynA1544_03208 PF17755 UvrA DNA-binding domain SynA1544_03208 PF17760 UvrA interaction domain SynA1544_03209 PF02463 RecF/RecN/SMC N terminal domain SynA1544_03210 PF03109 ABC1 family SynA1544_03212 PF00291 Pyridoxal-phosphate dependent enzyme