locus-tag class description SynA1560_00001 PF00712 DNA polymerase III beta subunit, N-terminal domain SynA1560_00001 PF02767 DNA polymerase III beta subunit, central domain SynA1560_00001 PF02768 DNA polymerase III beta subunit, C-terminal domain SynA1560_00003 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain SynA1560_00003 PF02769 AIR synthase related protein, C-terminal domain SynA1560_00003 PF00586 AIR synthase related protein, N-terminal domain SynA1560_00004 PF00156 Phosphoribosyl transferase domain SynA1560_00005 PF00521 DNA gyrase/topoisomerase IV, subunit A SynA1560_00005 PF03989 DNA gyrase C-terminal domain, beta-propeller SynA1560_00007 PF08331 Domain of unknown function (DUF1730) SynA1560_00010 PF01029 NusB family SynA1560_00011 PF00448 SRP54-type protein, GTPase domain SynA1560_00011 PF02881 SRP54-type protein, helical bundle domain SynA1560_00012 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain SynA1560_00012 PF07228 Stage II sporulation protein E (SpoIIE) SynA1560_00013 PF00206 Lyase SynA1560_00013 PF14698 Argininosuccinate lyase C-terminal SynA1560_00014 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) SynA1560_00015 PF01207 Dihydrouridine synthase (Dus) SynA1560_00016 PF01641 SelR domain SynA1560_00018 PF00482 Type II secretion system (T2SS), protein F SynA1560_00019 PF00437 Type II/IV secretion system protein SynA1560_00020 PF00437 Type II/IV secretion system protein SynA1560_00021 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain SynA1560_00021 PF00437 Type II/IV secretion system protein SynA1560_00022 PF01025 GrpE SynA1560_00023 PF00226 DnaJ domain SynA1560_00023 PF00684 DnaJ central domain SynA1560_00023 PF01556 DnaJ C terminal domain SynA1560_00025 PF03193 RsgA GTPase SynA1560_00026 PF02575 YbaB/EbfC DNA-binding family SynA1560_00027 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain SynA1560_00027 PF01565 FAD binding domain SynA1560_00028 PF01225 Mur ligase family, catalytic domain SynA1560_00028 PF02875 Mur ligase family, glutamate ligase domain SynA1560_00028 PF08245 Mur ligase middle domain SynA1560_00029 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SynA1560_00029 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SynA1560_00030 PF02769 AIR synthase related protein, C-terminal domain SynA1560_00030 PF00586 AIR synthase related protein, N-terminal domain SynA1560_00031 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SynA1560_00032 PF01132 Elongation factor P (EF-P) OB domain SynA1560_00032 PF09285 Elongation factor P, C-terminal SynA1560_00032 PF08207 Elongation factor P (EF-P) KOW-like domain SynA1560_00033 PF00364 Biotin-requiring enzyme SynA1560_00034 PF04166 Pyridoxal phosphate biosynthetic protein PdxA SynA1560_00040 PF00176 SNF2 family N-terminal domain SynA1560_00040 PF00271 Helicase conserved C-terminal domain SynA1560_00040 PF04434 SWIM zinc finger SynA1560_00048 PF00266 Aminotransferase class-V SynA1560_00049 PF01888 CbiD SynA1560_00050 PF00117 Glutamine amidotransferase class-I SynA1560_00050 PF00958 GMP synthase C terminal domain SynA1560_00053 PF00905 Penicillin binding protein transpeptidase domain SynA1560_00054 PF00534 Glycosyl transferases group 1 SynA1560_00054 PF13439 Glycosyltransferase Family 4 SynA1560_00055 PF16363 GDP-mannose 4,6 dehydratase SynA1560_00057 PF05690 Thiazole biosynthesis protein ThiG SynA1560_00060 PF00453 Ribosomal protein L20 SynA1560_00061 PF01632 Ribosomal protein L35 SynA1560_00062 PF08486 Stage II sporulation protein SynA1560_00064 PF12169 DNA polymerase III subunits gamma and tau domain III SynA1560_00067 PF10431 C-terminal, D2-small domain, of ClpB protein SynA1560_00067 PF07724 AAA domain (Cdc48 subfamily) SynA1560_00067 PF06689 ClpX C4-type zinc finger SynA1560_00068 PF00574 Clp protease SynA1560_00069 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SynA1560_00069 PF05697 Bacterial trigger factor protein (TF) SynA1560_00069 PF05698 Bacterial trigger factor protein (TF) C-terminus SynA1560_00070 PF01118 Semialdehyde dehydrogenase, NAD binding domain SynA1560_00070 PF02774 Semialdehyde dehydrogenase, dimerisation domain SynA1560_00071 PF00701 Dihydrodipicolinate synthetase family SynA1560_00072 PF17770 Ribonuclease J C-terminal domain SynA1560_00072 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain SynA1560_00072 PF00753 Metallo-beta-lactamase superfamily SynA1560_00074 PF01171 PP-loop family SynA1560_00074 PF09179 TilS substrate binding domain SynA1560_00079 PF00271 Helicase conserved C-terminal domain SynA1560_00079 PF17757 UvrB interaction domain SynA1560_00079 PF02151 UvrB/uvrC motif SynA1560_00079 PF04851 Type III restriction enzyme, res subunit SynA1560_00079 PF12344 Ultra-violet resistance protein B SynA1560_00080 PF01842 ACT domain SynA1560_00080 PF13840 ACT domain SynA1560_00080 PF00696 Amino acid kinase family SynA1560_00082 PF02570 Precorrin-8X methylmutase SynA1560_00085 PF00488 MutS domain V SynA1560_00085 PF01624 MutS domain I SynA1560_00085 PF05192 MutS domain III SynA1560_00085 PF05188 MutS domain II SynA1560_00085 PF05190 MutS family domain IV SynA1560_00086 PF01737 YCF9 SynA1560_00087 PF00885 6,7-dimethyl-8-ribityllumazine synthase SynA1560_00089 PF02151 UvrB/uvrC motif SynA1560_00089 PF00271 Helicase conserved C-terminal domain SynA1560_00089 PF17757 UvrB interaction domain SynA1560_00089 PF12344 Ultra-violet resistance protein B SynA1560_00089 PF04851 Type III restriction enzyme, res subunit SynA1560_00090 PF02151 UvrB/uvrC motif SynA1560_00090 PF04851 Type III restriction enzyme, res subunit SynA1560_00090 PF12344 Ultra-violet resistance protein B SynA1560_00090 PF00271 Helicase conserved C-terminal domain SynA1560_00090 PF17757 UvrB interaction domain SynA1560_00091 PF00271 Helicase conserved C-terminal domain SynA1560_00091 PF04851 Type III restriction enzyme, res subunit SynA1560_00091 PF02151 UvrB/uvrC motif SynA1560_00091 PF12344 Ultra-violet resistance protein B SynA1560_00091 PF17757 UvrB interaction domain SynA1560_00092 PF02719 Polysaccharide biosynthesis protein SynA1560_00093 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SynA1560_00094 PF02348 Cytidylyltransferase SynA1560_00095 PF02585 GlcNAc-PI de-N-acetylase SynA1560_00098 PF00551 Formyl transferase SynA1560_00098 PF02911 Formyl transferase, C-terminal domain SynA1560_00099 PF03102 NeuB family SynA1560_00099 PF08666 SAF domain SynA1560_00102 PF16861 Carbamoyltransferase C-terminus SynA1560_00102 PF02543 Carbamoyltransferase N-terminus SynA1560_00108 PF00483 Nucleotidyl transferase SynA1560_00109 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase SynA1560_00110 PF04321 RmlD substrate binding domain SynA1560_00111 PF02397 Bacterial sugar transferase SynA1560_00113 PF01370 NAD dependent epimerase/dehydratase family SynA1560_00114 PF16363 GDP-mannose 4,6 dehydratase SynA1560_00116 PF00534 Glycosyl transferases group 1 SynA1560_00116 PF13439 Glycosyltransferase Family 4 SynA1560_00123 PF01075 Glycosyltransferase family 9 (heptosyltransferase) SynA1560_00128 PF13439 Glycosyltransferase Family 4 SynA1560_00130 PF13439 Glycosyltransferase Family 4 SynA1560_00136 PF03412 Peptidase C39 family SynA1560_00136 PF00005 ABC transporter SynA1560_00136 PF00664 ABC transporter transmembrane region SynA1560_00137 PF00529 HlyD membrane-fusion protein of T1SS SynA1560_00140 PF00534 Glycosyl transferases group 1 SynA1560_00140 PF13439 Glycosyltransferase Family 4 SynA1560_00143 PF00535 Glycosyl transferase family 2 SynA1560_00144 PF13439 Glycosyltransferase Family 4 SynA1560_00144 PF00534 Glycosyl transferases group 1 SynA1560_00145 PF00005 ABC transporter SynA1560_00151 PF07517 SecA DEAD-like domain SynA1560_00151 PF01043 SecA preprotein cross-linking domain SynA1560_00151 PF07516 SecA Wing and Scaffold domain SynA1560_00152 PF00132 Bacterial transferase hexapeptide (six repeats) SynA1560_00152 PF06426 Serine acetyltransferase, N-terminal SynA1560_00153 PF00392 Bacterial regulatory proteins, gntR family SynA1560_00155 PF05198 Translation initiation factor IF-3, N-terminal domain SynA1560_00155 PF00707 Translation initiation factor IF-3, C-terminal domain SynA1560_00157 PF00986 DNA gyrase B subunit, carboxyl terminus SynA1560_00157 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SynA1560_00157 PF01751 Toprim domain SynA1560_00157 PF00204 DNA gyrase B SynA1560_00159 PF02537 CrcB-like protein, Camphor Resistance (CrcB) SynA1560_00160 PF02537 CrcB-like protein, Camphor Resistance (CrcB) SynA1560_00162 PF00255 Glutathione peroxidase SynA1560_00163 PF03448 MgtE intracellular N domain SynA1560_00163 PF01769 Divalent cation transporter SynA1560_00163 PF00571 CBS domain SynA1560_00164 PF00140 Sigma-70 factor, region 1.2 SynA1560_00164 PF04545 Sigma-70, region 4 SynA1560_00164 PF04539 Sigma-70 region 3 SynA1560_00164 PF04542 Sigma-70 region 2 SynA1560_00166 PF00873 AcrB/AcrD/AcrF family SynA1560_00167 PF00529 HlyD membrane-fusion protein of T1SS SynA1560_00167 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SynA1560_00173 PF00355 Rieske [2Fe-2S] domain SynA1560_00173 PF00848 Ring hydroxylating alpha subunit (catalytic domain) SynA1560_00174 PF00005 ABC transporter SynA1560_00175 PF00528 Binding-protein-dependent transport system inner membrane component SynA1560_00177 PF02492 CobW/HypB/UreG, nucleotide-binding domain SynA1560_00178 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA SynA1560_00179 PF00491 Arginase family SynA1560_00182 PF14815 NUDIX domain SynA1560_00182 PF00730 HhH-GPD superfamily base excision DNA repair protein SynA1560_00183 PF03253 Urea transporter SynA1560_00184 PF00491 Arginase family SynA1560_00186 PF00294 pfkB family carbohydrate kinase SynA1560_00188 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE SynA1560_00189 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain SynA1560_00189 PF05221 S-adenosyl-L-homocysteine hydrolase SynA1560_00191 PF09335 SNARE associated Golgi protein SynA1560_00192 PF00436 Single-strand binding protein family SynA1560_00197 PF00486 Transcriptional regulatory protein, C terminal SynA1560_00197 PF00072 Response regulator receiver domain SynA1560_00198 PF01336 OB-fold nucleic acid binding domain SynA1560_00198 PF00152 tRNA synthetases class II (D, K and N) SynA1560_00202 PF10017 Histidine-specific methyltransferase, SAM-dependent SynA1560_00203 PF12867 DinB superfamily SynA1560_00203 PF03781 Sulfatase-modifying factor enzyme 1 SynA1560_00204 PF00069 Protein kinase domain SynA1560_00205 PF01668 SmpB protein SynA1560_00206 PF17864 RuvB AAA lid domain SynA1560_00206 PF05491 RuvB C-terminal winged helix domain SynA1560_00206 PF05496 Holliday junction DNA helicase RuvB P-loop domain SynA1560_00208 PF07687 Peptidase dimerisation domain SynA1560_00208 PF01546 Peptidase family M20/M25/M40 SynA1560_00212 PF01964 Radical SAM ThiC family SynA1560_00216 PF16363 GDP-mannose 4,6 dehydratase SynA1560_00217 PF00535 Glycosyl transferase family 2 SynA1560_00219 PF02779 Transketolase, pyrimidine binding domain SynA1560_00219 PF02780 Transketolase, C-terminal domain SynA1560_00219 PF00456 Transketolase, thiamine diphosphate binding domain SynA1560_00220 PF00109 Beta-ketoacyl synthase, N-terminal domain SynA1560_00220 PF02801 Beta-ketoacyl synthase, C-terminal domain SynA1560_00221 PF00550 Phosphopantetheine attachment site SynA1560_00222 PF12838 4Fe-4S dicluster domain SynA1560_00223 PF01380 SIS domain SynA1560_00224 PF16363 GDP-mannose 4,6 dehydratase SynA1560_00225 PF01050 Mannose-6-phosphate isomerase SynA1560_00225 PF00483 Nucleotidyl transferase SynA1560_00226 PF01782 RimM N-terminal domain SynA1560_00226 PF05239 PRC-barrel domain SynA1560_00228 PF00520 Ion transport protein SynA1560_00228 PF00027 Cyclic nucleotide-binding domain SynA1560_00229 PF14622 Ribonuclease-III-like SynA1560_00229 PF00035 Double-stranded RNA binding motif SynA1560_00230 PF00413 Matrixin SynA1560_00230 PF08548 Peptidase M10 serralysin C terminal SynA1560_00230 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) SynA1560_00234 PF00343 Carbohydrate phosphorylase SynA1560_00235 PF00999 Sodium/hydrogen exchanger family SynA1560_00237 PF12697 Alpha/beta hydrolase family SynA1560_00239 PF01565 FAD binding domain SynA1560_00241 PF02754 Cysteine-rich domain SynA1560_00241 PF13183 4Fe-4S dicluster domain SynA1560_00242 PF00180 Isocitrate/isopropylmalate dehydrogenase SynA1560_00243 PF00535 Glycosyl transferase family 2 SynA1560_00245 PF01048 Phosphorylase superfamily SynA1560_00247 PF01126 Heme oxygenase SynA1560_00249 PF00664 ABC transporter transmembrane region SynA1560_00249 PF00005 ABC transporter SynA1560_00251 PF00534 Glycosyl transferases group 1 SynA1560_00251 PF17101 Stealth protein CR1, conserved region 1 SynA1560_00251 PF17103 Stealth protein CR4, conserved region 4 SynA1560_00251 PF11380 Stealth protein CR2, conserved region 2 SynA1560_00251 PF17102 Stealth protein CR3, conserved region 3 SynA1560_00252 PF00534 Glycosyl transferases group 1 SynA1560_00252 PF13439 Glycosyltransferase Family 4 SynA1560_00253 PF00534 Glycosyl transferases group 1 SynA1560_00253 PF13439 Glycosyltransferase Family 4 SynA1560_00256 PF00793 DAHP synthetase I family SynA1560_00258 PF02348 Cytidylyltransferase SynA1560_00260 PF00535 Glycosyl transferase family 2 SynA1560_00262 PF00571 CBS domain SynA1560_00262 PF01743 Poly A polymerase head domain SynA1560_00262 PF02272 DHHA1 domain SynA1560_00262 PF01368 DHH family SynA1560_00264 PF00571 CBS domain SynA1560_00264 PF01380 SIS domain SynA1560_00266 PF00580 UvrD/REP helicase N-terminal domain SynA1560_00266 PF13361 UvrD-like helicase C-terminal domain SynA1560_00267 PF02769 AIR synthase related protein, C-terminal domain SynA1560_00267 PF00586 AIR synthase related protein, N-terminal domain SynA1560_00268 PF16363 GDP-mannose 4,6 dehydratase SynA1560_00269 PF13393 Histidyl-tRNA synthetase SynA1560_00269 PF03129 Anticodon binding domain SynA1560_00270 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain SynA1560_00270 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain SynA1560_00270 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain SynA1560_00271 PF01370 NAD dependent epimerase/dehydratase family SynA1560_00272 PF01788 PsbJ SynA1560_00273 PF02419 PsbL protein SynA1560_00274 PF00283 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits SynA1560_00275 PF00284 Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit SynA1560_00275 PF00283 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits SynA1560_00276 PF14870 Photosynthesis system II assembly factor YCF48 SynA1560_00277 PF00301 Rubredoxin SynA1560_00278 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 SynA1560_00279 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit SynA1560_00280 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit SynA1560_00281 PF01933 Uncharacterised protein family UPF0052 SynA1560_00282 PF17850 CysA C-terminal regulatory domain SynA1560_00282 PF12857 TOBE-like domain SynA1560_00282 PF00005 ABC transporter SynA1560_00283 PF02470 MlaD protein SynA1560_00284 PF17863 AAA lid domain SynA1560_00284 PF13519 von Willebrand factor type A domain SynA1560_00284 PF01078 Magnesium chelatase, subunit ChlI SynA1560_00285 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) SynA1560_00286 PF00005 ABC transporter SynA1560_00286 PF00664 ABC transporter transmembrane region SynA1560_00287 PF00293 NUDIX domain SynA1560_00288 PF03441 FAD binding domain of DNA photolyase SynA1560_00288 PF00875 DNA photolyase SynA1560_00289 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SynA1560_00297 PF00475 Imidazoleglycerol-phosphate dehydratase SynA1560_00298 PF03055 Retinal pigment epithelial membrane protein SynA1560_00300 PF02028 BCCT, betaine/carnitine/choline family transporter SynA1560_00301 PF00890 FAD binding domain SynA1560_00304 PF01725 Ham1 family SynA1560_00305 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SynA1560_00305 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SynA1560_00305 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SynA1560_00305 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SynA1560_00307 PF01571 Aminomethyltransferase folate-binding domain SynA1560_00312 PF00571 CBS domain SynA1560_00312 PF01595 Cyclin M transmembrane N-terminal domain SynA1560_00312 PF03471 Transporter associated domain SynA1560_00313 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SynA1560_00313 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SynA1560_00315 PF03808 Glycosyl transferase WecB/TagA/CpsF family SynA1560_00316 PF02533 Photosystem II 4 kDa reaction centre component SynA1560_00317 PF01702 Queuine tRNA-ribosyltransferase SynA1560_00318 PF02654 Cobalamin-5-phosphate synthase SynA1560_00319 PF00512 His Kinase A (phospho-acceptor) domain SynA1560_00319 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SynA1560_00319 PF00672 HAMP domain SynA1560_00322 PF02142 MGS-like domain SynA1560_00322 PF01808 AICARFT/IMPCHase bienzyme SynA1560_00326 PF02401 LytB protein SynA1560_00327 PF00909 Ammonium Transporter Family SynA1560_00328 PF17746 SfsA N-terminal OB domain SynA1560_00328 PF03749 Sugar fermentation stimulation protein RE domain SynA1560_00329 PF03023 Lipid II flippase MurJ SynA1560_00335 PF00464 Serine hydroxymethyltransferase SynA1560_00336 PF00953 Glycosyl transferase family 4 SynA1560_00337 PF18146 Damage-inducible protein CinA KH domain SynA1560_00337 PF00994 Probable molybdopterin binding domain SynA1560_00337 PF02464 Competence-damaged protein SynA1560_00338 PF00330 Aconitase family (aconitate hydratase) SynA1560_00339 PF00694 Aconitase C-terminal domain SynA1560_00342 PF02532 Photosystem II reaction centre I protein (PSII 4.8 kDa protein) SynA1560_00344 PF02468 Photosystem II reaction centre N protein (psbN) SynA1560_00345 PF00737 Photosystem II 10 kDa phosphoprotein SynA1560_00346 PF02416 mttA/Hcf106 family SynA1560_00347 PF01195 Peptidyl-tRNA hydrolase SynA1560_00350 PF11283 Protein of unknown function (DUF3084) SynA1560_00351 PF13545 Crp-like helix-turn-helix domain SynA1560_00351 PF00027 Cyclic nucleotide-binding domain SynA1560_00352 PF03725 3' exoribonuclease family, domain 2 SynA1560_00352 PF01138 3' exoribonuclease family, domain 1 SynA1560_00355 PF00692 dUTPase SynA1560_00357 PF00085 Thioredoxin SynA1560_00359 PF14718 Soluble lytic murein transglycosylase L domain SynA1560_00359 PF01464 Transglycosylase SLT domain SynA1560_00361 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SynA1560_00361 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SynA1560_00361 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SynA1560_00361 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SynA1560_00364 PF02390 Putative methyltransferase SynA1560_00368 PF08264 Anticodon-binding domain of tRNA SynA1560_00368 PF06827 Zinc finger found in FPG and IleRS SynA1560_00368 PF00133 tRNA synthetases class I (I, L, M and V) SynA1560_00372 PF02686 Glu-tRNAGln amidotransferase C subunit SynA1560_00373 PF02633 Creatinine amidohydrolase SynA1560_00375 PF02592 Putative vitamin uptake transporter SynA1560_00383 PF02245 Methylpurine-DNA glycosylase (MPG) SynA1560_00384 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SynA1560_00384 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SynA1560_00385 PF07992 Pyridine nucleotide-disulphide oxidoreductase SynA1560_00389 PF08369 Proto-chlorophyllide reductase 57 kD subunit SynA1560_00389 PF00148 Nitrogenase component 1 type Oxidoreductase SynA1560_00391 PF10742 Protein of unknown function (DUF2555) SynA1560_00392 PF02441 Flavoprotein SynA1560_00392 PF04127 DNA / pantothenate metabolism flavoprotein SynA1560_00394 PF01716 Manganese-stabilising protein / photosystem II polypeptide SynA1560_00395 PF14306 PUA-like domain SynA1560_00395 PF01747 ATP-sulfurylase SynA1560_00396 PF06480 FtsH Extracellular SynA1560_00396 PF00004 ATPase family associated with various cellular activities (AAA) SynA1560_00396 PF17862 AAA+ lid domain SynA1560_00396 PF01434 Peptidase family M41 SynA1560_00399 PF01264 Chorismate synthase SynA1560_00401 PF01758 Sodium Bile acid symporter family SynA1560_00403 PF00124 Photosynthetic reaction centre protein SynA1560_00406 PF02617 ATP-dependent Clp protease adaptor protein ClpS SynA1560_00407 PF00155 Aminotransferase class I and II SynA1560_00410 PF10150 Ribonuclease E/G family SynA1560_00411 PF01351 Ribonuclease HII SynA1560_00413 PF00800 Prephenate dehydratase SynA1560_00414 PF08241 Methyltransferase domain SynA1560_00415 PF00004 ATPase family associated with various cellular activities (AAA) SynA1560_00415 PF05362 Lon protease (S16) C-terminal proteolytic domain SynA1560_00415 PF02190 ATP-dependent protease La (LON) substrate-binding domain SynA1560_00416 PF00338 Ribosomal protein S10p/S20e SynA1560_00417 PF00009 Elongation factor Tu GTP binding domain SynA1560_00417 PF03143 Elongation factor Tu C-terminal domain SynA1560_00417 PF03144 Elongation factor Tu domain 2 SynA1560_00418 PF00009 Elongation factor Tu GTP binding domain SynA1560_00418 PF03764 Elongation factor G, domain IV SynA1560_00418 PF14492 Elongation Factor G, domain II SynA1560_00418 PF00679 Elongation factor G C-terminus SynA1560_00418 PF03144 Elongation factor Tu domain 2 SynA1560_00419 PF00177 Ribosomal protein S7p/S5e SynA1560_00420 PF00164 Ribosomal protein S12/S23 SynA1560_00423 PF04898 Glutamate synthase central domain SynA1560_00423 PF01645 Conserved region in glutamate synthase SynA1560_00423 PF01493 GXGXG motif SynA1560_00423 PF00310 Glutamine amidotransferases class-II SynA1560_00425 PF04055 Radical SAM superfamily SynA1560_00427 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SynA1560_00429 PF00223 Photosystem I psaA/psaB protein SynA1560_00430 PF00223 Photosystem I psaA/psaB protein SynA1560_00433 PF00873 AcrB/AcrD/AcrF family SynA1560_00434 PF02605 Photosystem I reaction centre subunit XI SynA1560_00435 PF00796 Photosystem I reaction centre subunit VIII SynA1560_00437 PF00535 Glycosyl transferase family 2 SynA1560_00441 PF01168 Alanine racemase, N-terminal domain SynA1560_00441 PF00842 Alanine racemase, C-terminal domain SynA1560_00443 PF00472 RF-1 domain SynA1560_00443 PF03462 PCRF domain SynA1560_00445 PF01197 Ribosomal protein L31 SynA1560_00446 PF00380 Ribosomal protein S9/S16 SynA1560_00447 PF00572 Ribosomal protein L13 SynA1560_00448 PF01416 tRNA pseudouridine synthase SynA1560_00449 PF01196 Ribosomal protein L17 SynA1560_00450 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain SynA1560_00450 PF01000 RNA polymerase Rpb3/RpoA insert domain SynA1560_00450 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain SynA1560_00451 PF00411 Ribosomal protein S11 SynA1560_00452 PF00416 Ribosomal protein S13/S18 SynA1560_00453 PF00444 Ribosomal protein L36 SynA1560_00455 PF00344 SecY translocase SynA1560_00456 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A SynA1560_00457 PF03719 Ribosomal protein S5, C-terminal domain SynA1560_00457 PF00333 Ribosomal protein S5, N-terminal domain SynA1560_00458 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast SynA1560_00459 PF00347 Ribosomal protein L6 SynA1560_00460 PF00410 Ribosomal protein S8 SynA1560_00461 PF00281 Ribosomal protein L5 SynA1560_00461 PF00673 ribosomal L5P family C-terminus SynA1560_00462 PF00467 KOW motif SynA1560_00462 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 SynA1560_00463 PF00238 Ribosomal protein L14p/L23e SynA1560_00464 PF00366 Ribosomal protein S17 SynA1560_00465 PF00831 Ribosomal L29 protein SynA1560_00466 PF00252 Ribosomal protein L16p/L10e SynA1560_00467 PF07650 KH domain SynA1560_00467 PF00189 Ribosomal protein S3, C-terminal domain SynA1560_00468 PF00237 Ribosomal protein L22p/L17e SynA1560_00469 PF00203 Ribosomal protein S19 SynA1560_00470 PF00181 Ribosomal Proteins L2, RNA binding domain SynA1560_00470 PF03947 Ribosomal Proteins L2, C-terminal domain SynA1560_00471 PF00276 Ribosomal protein L23 SynA1560_00472 PF00573 Ribosomal protein L4/L1 family SynA1560_00473 PF00297 Ribosomal protein L3 SynA1560_00474 PF11909 NADH-quinone oxidoreductase cyanobacterial subunit N SynA1560_00479 PF00154 recA bacterial DNA recombination protein SynA1560_00484 PF02153 Prephenate dehydrogenase SynA1560_00485 PF01593 Flavin containing amine oxidoreductase SynA1560_00486 PF03881 Fructosamine kinase SynA1560_00489 PF00899 ThiF family SynA1560_00489 PF00581 Rhodanese-like domain SynA1560_00490 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP SynA1560_00491 PF02540 NAD synthase SynA1560_00492 PF02675 S-adenosylmethionine decarboxylase SynA1560_00493 PF13476 AAA domain SynA1560_00496 PF00311 Phosphoenolpyruvate carboxylase SynA1560_00497 PF04107 Glutamate-cysteine ligase family 2(GCS2) SynA1560_00498 PF00425 chorismate binding enzyme SynA1560_00498 PF04715 Anthranilate synthase component I, N terminal region SynA1560_00499 PF02531 PsaD SynA1560_00500 PF13493 Domain of unknown function (DUF4118) SynA1560_00500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SynA1560_00500 PF00512 His Kinase A (phospho-acceptor) domain SynA1560_00500 PF02702 Osmosensitive K+ channel His kinase sensor domain SynA1560_00500 PF00582 Universal stress protein family SynA1560_00501 PF01098 Cell cycle protein SynA1560_00502 PF01883 Iron-sulfur cluster assembly protein SynA1560_00502 PF10609 NUBPL iron-transfer P-loop NTPase SynA1560_00503 PF01218 Coproporphyrinogen III oxidase SynA1560_00512 PF00248 Aldo/keto reductase family SynA1560_00514 PF02769 AIR synthase related protein, C-terminal domain SynA1560_00514 PF00586 AIR synthase related protein, N-terminal domain SynA1560_00515 PF03330 Lytic transglycolase SynA1560_00516 PF02224 Cytidylate kinase SynA1560_00516 PF02569 Pantoate-beta-alanine ligase SynA1560_00517 PF01451 Low molecular weight phosphotyrosine protein phosphatase SynA1560_00519 PF03130 PBS lyase HEAT-like repeat SynA1560_00520 PF06206 CpeT/CpcT family (DUF1001) SynA1560_00521 PF00502 Phycobilisome protein SynA1560_00522 PF00502 Phycobilisome protein SynA1560_00523 PF05996 Ferredoxin-dependent bilin reductase SynA1560_00524 PF05996 Ferredoxin-dependent bilin reductase SynA1560_00525 PF09367 CpeS-like protein SynA1560_00527 PF00502 Phycobilisome protein SynA1560_00528 PF00502 Phycobilisome protein SynA1560_00529 PF10847 Protein of unknown function (DUF2656) SynA1560_00535 PF00427 Phycobilisome Linker polypeptide SynA1560_00536 PF00502 Phycobilisome protein SynA1560_00537 PF00502 Phycobilisome protein SynA1560_00543 PF06206 CpeT/CpcT family (DUF1001) SynA1560_00544 PF09367 CpeS-like protein SynA1560_00546 PF01383 CpcD/allophycocyanin linker domain SynA1560_00546 PF00427 Phycobilisome Linker polypeptide SynA1560_00547 PF00427 Phycobilisome Linker polypeptide SynA1560_00548 PF01383 CpcD/allophycocyanin linker domain SynA1560_00548 PF00427 Phycobilisome Linker polypeptide SynA1560_00550 PF00427 Phycobilisome Linker polypeptide SynA1560_00552 PF00427 Phycobilisome Linker polypeptide SynA1560_00561 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SynA1560_00562 PF00438 S-adenosylmethionine synthetase, N-terminal domain SynA1560_00562 PF02773 S-adenosylmethionine synthetase, C-terminal domain SynA1560_00562 PF02772 S-adenosylmethionine synthetase, central domain SynA1560_00564 PF00575 S1 RNA binding domain SynA1560_00565 PF03477 ATP cone domain SynA1560_00566 PF01405 Photosystem II reaction centre T protein SynA1560_00567 PF00421 Photosystem II protein SynA1560_00569 PF00582 Universal stress protein family SynA1560_00571 PF02481 DNA recombination-mediator protein A SynA1560_00571 PF17782 DprA winged helix domain SynA1560_00572 PF05175 Methyltransferase small domain SynA1560_00573 PF03481 Putative GTP-binding controlling metal-binding SynA1560_00573 PF01300 Telomere recombination SynA1560_00576 PF00196 Bacterial regulatory proteins, luxR family SynA1560_00576 PF00072 Response regulator receiver domain SynA1560_00577 PF03776 Septum formation topological specificity factor MinE SynA1560_00578 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain SynA1560_00579 PF03775 Septum formation inhibitor MinC, C-terminal domain SynA1560_00580 PF01966 HD domain SynA1560_00581 PF03572 Peptidase family S41 SynA1560_00581 PF00595 PDZ domain SynA1560_00582 PF00033 Cytochrome b/b6/petB SynA1560_00583 PF00032 Cytochrome b(C-terminal)/b6/petD SynA1560_00595 PF02601 Exonuclease VII, large subunit SynA1560_00595 PF13742 OB-fold nucleic acid binding domain SynA1560_00597 PF00762 Ferrochelatase SynA1560_00598 PF08482 ATP-dependent helicase C-terminal SynA1560_00598 PF04408 Helicase associated domain (HA2) SynA1560_00598 PF00270 DEAD/DEAH box helicase SynA1560_00598 PF00271 Helicase conserved C-terminal domain SynA1560_00602 PF13180 PDZ domain SynA1560_00604 PF12848 ABC transporter SynA1560_00604 PF00005 ABC transporter SynA1560_00604 PF16326 ABC transporter C-terminal domain SynA1560_00609 PF03702 Anhydro-N-acetylmuramic acid kinase SynA1560_00610 PF02080 TrkA-C domain SynA1560_00610 PF02254 TrkA-N domain SynA1560_00611 PF02386 Cation transport protein SynA1560_00612 PF03600 Citrate transporter SynA1560_00612 PF02080 TrkA-C domain SynA1560_00613 PF16360 GTP-binding GTPase Middle Region SynA1560_00613 PF01926 50S ribosome-binding GTPase SynA1560_00613 PF13167 GTP-binding GTPase N-terminal SynA1560_00614 PF07992 Pyridine nucleotide-disulphide oxidoreductase SynA1560_00615 PF01507 Phosphoadenosine phosphosulfate reductase family SynA1560_00616 PF03309 Type III pantothenate kinase SynA1560_00617 PF00578 AhpC/TSA family SynA1560_00622 PF16193 AAA C-terminal domain SynA1560_00622 PF00004 ATPase family associated with various cellular activities (AAA) SynA1560_00622 PF12002 MgsA AAA+ ATPase C terminal SynA1560_00623 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SynA1560_00624 PF00873 AcrB/AcrD/AcrF family SynA1560_00626 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SynA1560_00626 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SynA1560_00626 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SynA1560_00626 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SynA1560_00632 PF13091 PLD-like domain SynA1560_00635 PF00427 Phycobilisome Linker polypeptide SynA1560_00639 PF02943 Ferredoxin thioredoxin reductase catalytic beta chain SynA1560_00640 PF01458 Uncharacterized protein family (UPF0051) SynA1560_00641 PF00005 ABC transporter SynA1560_00642 PF01458 Uncharacterized protein family (UPF0051) SynA1560_00643 PF00266 Aminotransferase class-V SynA1560_00645 PF01008 Initiation factor 2 subunit family SynA1560_00646 PF00596 Class II Aldolase and Adducin N-terminal domain SynA1560_00648 PF01327 Polypeptide deformylase SynA1560_00651 PF01165 Ribosomal protein S21 SynA1560_00653 PF01078 Magnesium chelatase, subunit ChlI SynA1560_00653 PF13335 Magnesium chelatase, subunit ChlI C-terminal SynA1560_00654 PF01230 HIT domain SynA1560_00655 PF06472 ABC transporter transmembrane region 2 SynA1560_00655 PF00005 ABC transporter SynA1560_00659 PF07444 Ycf66 protein N-terminus SynA1560_00660 PF06596 Photosystem II reaction centre X protein (PsbX) SynA1560_00662 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SynA1560_00662 PF00289 Biotin carboxylase, N-terminal domain SynA1560_00662 PF02785 Biotin carboxylase C-terminal domain SynA1560_00665 PF01641 SelR domain SynA1560_00667 PF06470 SMC proteins Flexible Hinge Domain SynA1560_00667 PF02463 RecF/RecN/SMC N terminal domain SynA1560_00671 PF01170 Putative RNA methylase family UPF0020 SynA1560_00671 PF02926 THUMP domain SynA1560_00677 PF07862 Nif11 domain SynA1560_00683 PF07862 Nif11 domain SynA1560_00702 PF07992 Pyridine nucleotide-disulphide oxidoreductase SynA1560_00703 PF00258 Flavodoxin SynA1560_00707 PF01740 STAS domain SynA1560_00707 PF00916 Sulfate permease family SynA1560_00709 PF00226 DnaJ domain SynA1560_00709 PF01556 DnaJ C terminal domain SynA1560_00710 PF00490 Delta-aminolevulinic acid dehydratase SynA1560_00712 PF00488 MutS domain V SynA1560_00712 PF01713 Smr domain SynA1560_00713 PF00005 ABC transporter SynA1560_00713 PF17912 MalK OB fold domain SynA1560_00714 PF01018 GTP1/OBG SynA1560_00714 PF01926 50S ribosome-binding GTPase SynA1560_00718 PF00005 ABC transporter SynA1560_00718 PF12848 ABC transporter SynA1560_00718 PF16326 ABC transporter C-terminal domain SynA1560_00720 PF13409 Glutathione S-transferase, N-terminal domain SynA1560_00721 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family SynA1560_00726 PF00124 Photosynthetic reaction centre protein SynA1560_00732 PF00009 Elongation factor Tu GTP binding domain SynA1560_00732 PF11987 Translation-initiation factor 2 SynA1560_00732 PF04760 Translation initiation factor IF-2, N-terminal region SynA1560_00734 PF00575 S1 RNA binding domain SynA1560_00734 PF13184 NusA-like KH domain SynA1560_00734 PF08529 NusA N-terminal domain SynA1560_00735 PF02576 RimP N-terminal domain SynA1560_00736 PF04055 Radical SAM superfamily SynA1560_00740 PF13180 PDZ domain SynA1560_00741 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) SynA1560_00742 PF00815 Histidinol dehydrogenase SynA1560_00743 PF01649 Ribosomal protein S20 SynA1560_00744 PF01026 TatD related DNase SynA1560_00745 PF04565 RNA polymerase Rpb2, domain 3 SynA1560_00745 PF04560 RNA polymerase Rpb2, domain 7 SynA1560_00745 PF00562 RNA polymerase Rpb2, domain 6 SynA1560_00745 PF04563 RNA polymerase beta subunit SynA1560_00745 PF10385 RNA polymerase beta subunit external 1 domain SynA1560_00745 PF04561 RNA polymerase Rpb2, domain 2 SynA1560_00746 PF04997 RNA polymerase Rpb1, domain 1 SynA1560_00746 PF04983 RNA polymerase Rpb1, domain 3 SynA1560_00746 PF00623 RNA polymerase Rpb1, domain 2 SynA1560_00747 PF05000 RNA polymerase Rpb1, domain 4 SynA1560_00747 PF04983 RNA polymerase Rpb1, domain 3 SynA1560_00747 PF04998 RNA polymerase Rpb1, domain 5 SynA1560_00749 PF04055 Radical SAM superfamily SynA1560_00757 PF02527 rRNA small subunit methyltransferase G SynA1560_00758 PF00684 DnaJ central domain SynA1560_00758 PF01556 DnaJ C terminal domain SynA1560_00758 PF00226 DnaJ domain SynA1560_00760 PF00202 Aminotransferase class-III SynA1560_00763 PF13649 Methyltransferase domain SynA1560_00766 PF00155 Aminotransferase class I and II SynA1560_00767 PF01758 Sodium Bile acid symporter family SynA1560_00768 PF00271 Helicase conserved C-terminal domain SynA1560_00768 PF00270 DEAD/DEAH box helicase SynA1560_00768 PF08148 DSHCT (NUC185) domain SynA1560_00769 PF00206 Lyase SynA1560_00769 PF10415 Fumarase C C-terminus SynA1560_00770 PF10397 Adenylosuccinate lyase C-terminus SynA1560_00770 PF00206 Lyase SynA1560_00772 PF01728 FtsJ-like methyltransferase SynA1560_00772 PF01479 S4 domain SynA1560_00773 PF00543 Nitrogen regulatory protein P-II SynA1560_00776 PF14489 QueF-like protein SynA1560_00777 PF05140 ResB-like family SynA1560_00778 PF02683 Cytochrome C biogenesis protein transmembrane region SynA1560_00778 PF11412 Disulphide bond corrector protein DsbC SynA1560_00779 PF01098 Cell cycle protein SynA1560_00780 PF01383 CpcD/allophycocyanin linker domain SynA1560_00781 PF00502 Phycobilisome protein SynA1560_00782 PF00502 Phycobilisome protein SynA1560_00784 PF00502 Phycobilisome protein SynA1560_00784 PF00427 Phycobilisome Linker polypeptide SynA1560_00785 PF13847 Methyltransferase domain SynA1560_00786 PF12966 N-ATPase, AtpR subunit SynA1560_00787 PF00119 ATP synthase A chain SynA1560_00788 PF00137 ATP synthase subunit C SynA1560_00789 PF00430 ATP synthase B/B' CF(0) SynA1560_00790 PF00430 ATP synthase B/B' CF(0) SynA1560_00791 PF00213 ATP synthase delta (OSCP) subunit SynA1560_00792 PF00306 ATP synthase alpha/beta chain, C terminal domain SynA1560_00792 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SynA1560_00792 PF02874 ATP synthase alpha/beta family, beta-barrel domain SynA1560_00793 PF00231 ATP synthase SynA1560_00795 PF00111 2Fe-2S iron-sulfur cluster binding domain SynA1560_00797 PF11805 Protein of unknown function (DUF3326) SynA1560_00799 PF01262 Alanine dehydrogenase/PNT, C-terminal domain SynA1560_00799 PF05222 Alanine dehydrogenase/PNT, N-terminal domain SynA1560_00804 PF13847 Methyltransferase domain SynA1560_00805 PF00795 Carbon-nitrogen hydrolase SynA1560_00805 PF02540 NAD synthase SynA1560_00806 PF01467 Cytidylyltransferase-like SynA1560_00807 PF12631 MnmE helical domain SynA1560_00807 PF01926 50S ribosome-binding GTPase SynA1560_00807 PF10396 GTP-binding protein TrmE N-terminus SynA1560_00808 PF00571 CBS domain SynA1560_00808 PF01595 Cyclin M transmembrane N-terminal domain SynA1560_00809 PF00557 Metallopeptidase family M24 SynA1560_00809 PF05195 Aminopeptidase P, N-terminal domain SynA1560_00811 PF04839 Plastid and cyanobacterial ribosomal protein (PSRP-3 / Ycf65) SynA1560_00813 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain SynA1560_00813 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain SynA1560_00814 PF02874 ATP synthase alpha/beta family, beta-barrel domain SynA1560_00814 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SynA1560_00815 PF00166 Chaperonin 10 Kd subunit SynA1560_00816 PF00118 TCP-1/cpn60 chaperonin family SynA1560_00817 PF01741 Large-conductance mechanosensitive channel, MscL SynA1560_00819 PF01676 Metalloenzyme superfamily SynA1560_00819 PF06415 BPG-independent PGAM N-terminus (iPGM_N) SynA1560_00820 PF00156 Phosphoribosyl transferase domain SynA1560_00821 PF02941 Ferredoxin thioredoxin reductase variable alpha chain SynA1560_00823 PF00012 Hsp70 protein SynA1560_00825 PF01192 RNA polymerase Rpb6 SynA1560_00830 PF02875 Mur ligase family, glutamate ligase domain SynA1560_00830 PF08245 Mur ligase middle domain SynA1560_00835 PF01842 ACT domain SynA1560_00835 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SynA1560_00835 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SynA1560_00837 PF00111 2Fe-2S iron-sulfur cluster binding domain SynA1560_00840 PF14495 Cytochrome c-550 domain SynA1560_00841 PF12706 Beta-lactamase superfamily domain SynA1560_00842 PF04122 Putative cell wall binding repeat 2 SynA1560_00842 PF08486 Stage II sporulation protein SynA1560_00843 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SynA1560_00844 PF05378 Hydantoinase/oxoprolinase N-terminal region SynA1560_00844 PF01968 Hydantoinase/oxoprolinase SynA1560_00852 PF01709 Transcriptional regulator SynA1560_00853 PF16198 tRNA pseudouridylate synthase B C-terminal domain SynA1560_00853 PF01509 TruB family pseudouridylate synthase (N terminal domain) SynA1560_00856 PF01016 Ribosomal L27 protein SynA1560_00857 PF00829 Ribosomal prokaryotic L21 protein SynA1560_00858 PF07688 KaiA C-terminal domain SynA1560_00859 PF07689 KaiB domain SynA1560_00860 PF06745 KaiC SynA1560_00861 PF00989 PAS fold SynA1560_00861 PF00512 His Kinase A (phospho-acceptor) domain SynA1560_00861 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SynA1560_00861 PF00672 HAMP domain SynA1560_00862 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain SynA1560_00862 PF02843 Phosphoribosylglycinamide synthetase, C domain SynA1560_00862 PF02844 Phosphoribosylglycinamide synthetase, N domain SynA1560_00864 PF01259 SAICAR synthetase SynA1560_00866 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase SynA1560_00867 PF07977 FabA-like domain SynA1560_00868 PF00132 Bacterial transferase hexapeptide (six repeats) SynA1560_00868 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 SynA1560_00869 PF02684 Lipid-A-disaccharide synthetase SynA1560_00870 PF01625 Peptide methionine sulfoxide reductase SynA1560_00875 PF00883 Cytosol aminopeptidase family, catalytic domain SynA1560_00875 PF02789 Cytosol aminopeptidase family, N-terminal domain SynA1560_00880 PF00579 tRNA synthetases class I (W and Y) SynA1560_00884 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SynA1560_00886 PF02660 Glycerol-3-phosphate acyltransferase SynA1560_00889 PF02405 Permease MlaE SynA1560_00892 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SynA1560_00892 PF00128 Alpha amylase, catalytic domain SynA1560_00895 PF00216 Bacterial DNA-binding protein SynA1560_00896 PF00749 tRNA synthetases class I (E and Q), catalytic domain SynA1560_00945 PF07862 Nif11 domain SynA1560_00946 PF07862 Nif11 domain SynA1560_00952 PF01593 Flavin containing amine oxidoreductase SynA1560_00956 PF07862 Nif11 domain SynA1560_00962 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SynA1560_00963 PF00459 Inositol monophosphatase family SynA1560_00964 PF01138 3' exoribonuclease family, domain 1 SynA1560_00964 PF00575 S1 RNA binding domain SynA1560_00964 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain SynA1560_00964 PF03725 3' exoribonuclease family, domain 2 SynA1560_00964 PF00013 KH domain SynA1560_00965 PF00253 Ribosomal protein S14p/S29e SynA1560_00966 PF13180 PDZ domain SynA1560_00966 PF02163 Peptidase family M50 SynA1560_00967 PF02403 Seryl-tRNA synthetase N-terminal domain SynA1560_00967 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SynA1560_00969 PF00004 ATPase family associated with various cellular activities (AAA) SynA1560_00969 PF17862 AAA+ lid domain SynA1560_00969 PF01434 Peptidase family M41 SynA1560_00969 PF06480 FtsH Extracellular SynA1560_00971 PF02096 60Kd inner membrane protein SynA1560_00973 PF00825 Ribonuclease P SynA1560_00974 PF00468 Ribosomal protein L34 SynA1560_00977 PF01343 Peptidase family S49 SynA1560_00978 PF00892 EamA-like transporter family SynA1560_00979 PF00534 Glycosyl transferases group 1 SynA1560_00979 PF13439 Glycosyltransferase Family 4 SynA1560_00980 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase SynA1560_00982 PF04012 PspA/IM30 family SynA1560_00983 PF00085 Thioredoxin SynA1560_00984 PF00155 Aminotransferase class I and II SynA1560_00985 PF08279 HTH domain SynA1560_00985 PF03099 Biotin/lipoate A/B protein ligase family SynA1560_00985 PF02237 Biotin protein ligase C terminal domain SynA1560_00986 PF04225 Opacity-associated protein A LysM-like domain SynA1560_00986 PF01551 Peptidase family M23 SynA1560_00987 PF00072 Response regulator receiver domain SynA1560_00987 PF00486 Transcriptional regulatory protein, C terminal SynA1560_00988 PF00005 ABC transporter SynA1560_00989 PF00361 Proton-conducting membrane transporter SynA1560_00990 PF01131 DNA topoisomerase SynA1560_00990 PF01751 Toprim domain SynA1560_00990 PF13368 Topoisomerase C-terminal repeat SynA1560_00997 PF00677 Lumazine binding domain SynA1560_01000 PF00510 Cytochrome c oxidase subunit III SynA1560_01001 PF00115 Cytochrome C and Quinol oxidase polypeptide I SynA1560_01002 PF00116 Cytochrome C oxidase subunit II, periplasmic domain SynA1560_01002 PF02790 Cytochrome C oxidase subunit II, transmembrane domain SynA1560_01003 PF02628 Cytochrome oxidase assembly protein SynA1560_01004 PF01040 UbiA prenyltransferase family SynA1560_01005 PF00005 ABC transporter SynA1560_01005 PF13732 Domain of unknown function (DUF4162) SynA1560_01008 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase SynA1560_01010 PF00118 TCP-1/cpn60 chaperonin family SynA1560_01013 PF07885 Ion channel SynA1560_01013 PF02254 TrkA-N domain SynA1560_01015 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase SynA1560_01016 PF02016 LD-carboxypeptidase N-terminal domain SynA1560_01016 PF17676 LD-carboxypeptidase C-terminal domain SynA1560_01017 PF01040 UbiA prenyltransferase family SynA1560_01018 PF02541 Ppx/GppA phosphatase family SynA1560_01023 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SynA1560_01024 PF01790 Prolipoprotein diacylglyceryl transferase SynA1560_01025 PF01333 Apocytochrome F, C-terminal SynA1560_01025 PF16639 Apocytochrome F, N-terminal SynA1560_01026 PF00355 Rieske [2Fe-2S] domain SynA1560_01028 PF00902 Sec-independent protein translocase protein (TatC) SynA1560_01029 PF05670 NFACT protein RNA binding domain SynA1560_01030 PF00625 Guanylate kinase SynA1560_01031 PF01701 Photosystem I reaction centre subunit IX / PsaJ SynA1560_01032 PF02507 Photosystem I reaction centre subunit III SynA1560_01033 PF00814 Glycoprotease family SynA1560_01034 PF00762 Ferrochelatase SynA1560_01035 PF00437 Type II/IV secretion system protein SynA1560_01036 PF02350 UDP-N-acetylglucosamine 2-epimerase SynA1560_01039 PF00749 tRNA synthetases class I (E and Q), catalytic domain SynA1560_01045 PF01245 Ribosomal protein L19 SynA1560_01047 PF00557 Metallopeptidase family M24 SynA1560_01048 PF00106 short chain dehydrogenase SynA1560_01051 PF07085 DRTGG domain SynA1560_01054 PF01145 SPFH domain / Band 7 family SynA1560_01056 PF04461 Protein of unknown function (DUF520) SynA1560_01058 PF00202 Aminotransferase class-III SynA1560_01060 PF02913 FAD linked oxidases, C-terminal domain SynA1560_01060 PF01565 FAD binding domain SynA1560_01065 PF01969 Protein of unknown function DUF111 SynA1560_01069 PF02492 CobW/HypB/UreG, nucleotide-binding domain SynA1560_01069 PF07683 Cobalamin synthesis protein cobW C-terminal domain SynA1560_01070 PF01329 Pterin 4 alpha carbinolamine dehydratase SynA1560_01072 PF02074 Carboxypeptidase Taq (M32) metallopeptidase SynA1560_01074 PF00719 Inorganic pyrophosphatase SynA1560_01077 PF01914 MarC family integral membrane protein SynA1560_01079 PF03900 Porphobilinogen deaminase, C-terminal domain SynA1560_01079 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain SynA1560_01093 PF04545 Sigma-70, region 4 SynA1560_01093 PF04539 Sigma-70 region 3 SynA1560_01093 PF04542 Sigma-70 region 2 SynA1560_01093 PF00140 Sigma-70 factor, region 1.2 SynA1560_01094 PF00271 Helicase conserved C-terminal domain SynA1560_01094 PF17764 3′ DNA-binding domain (3′BD) SynA1560_01094 PF18074 Primosomal protein N C-terminal domain SynA1560_01094 PF18319 PriA DNA helicase Cys-rich region (CRR) domain SynA1560_01094 PF00270 DEAD/DEAH box helicase SynA1560_01096 PF00696 Amino acid kinase family SynA1560_01097 PF11016 Protein of unknown function (DUF2854) SynA1560_01099 PF00436 Single-strand binding protein family SynA1560_01100 PF02571 Precorrin-6x reductase CbiJ/CobK SynA1560_01101 PF03091 CutA1 divalent ion tolerance protein SynA1560_01102 PF00294 pfkB family carbohydrate kinase SynA1560_01103 PF00709 Adenylosuccinate synthetase SynA1560_01104 PF13326 Photosystem II Pbs27 SynA1560_01105 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SynA1560_01105 PF03129 Anticodon binding domain SynA1560_01105 PF04073 Aminoacyl-tRNA editing domain SynA1560_01108 PF00719 Inorganic pyrophosphatase SynA1560_01112 PF10502 Signal peptidase, peptidase S26 SynA1560_01114 PF00300 Histidine phosphatase superfamily (branch 1) SynA1560_01117 PF03717 Penicillin-binding Protein dimerisation domain SynA1560_01117 PF00905 Penicillin binding protein transpeptidase domain SynA1560_01118 PF13202 EF hand SynA1560_01118 PF00923 Transaldolase/Fructose-6-phosphate aldolase SynA1560_01120 PF03441 FAD binding domain of DNA photolyase SynA1560_01120 PF00875 DNA photolyase SynA1560_01122 PF01765 Ribosome recycling factor SynA1560_01123 PF00696 Amino acid kinase family SynA1560_01126 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP SynA1560_01126 PF12557 Cob(I)alamin adenosyltransferase N terminal SynA1560_01127 PF01209 ubiE/COQ5 methyltransferase family SynA1560_01129 PF00762 Ferrochelatase SynA1560_01130 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SynA1560_01130 PF00205 Thiamine pyrophosphate enzyme, central domain SynA1560_01130 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SynA1560_01135 PF02578 Multi-copper polyphenol oxidoreductase laccase SynA1560_01137 PF00575 S1 RNA binding domain SynA1560_01139 PF11266 Long-chain fatty aldehyde decarbonylase SynA1560_01141 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit SynA1560_01143 PF01227 GTP cyclohydrolase I SynA1560_01144 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase SynA1560_01145 PF02163 Peptidase family M50 SynA1560_01145 PF00571 CBS domain SynA1560_01146 PF03099 Biotin/lipoate A/B protein ligase family SynA1560_01147 PF01925 Sulfite exporter TauE/SafE SynA1560_01151 PF07465 Photosystem I protein M (PsaM) SynA1560_01159 PF00106 short chain dehydrogenase SynA1560_01160 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family SynA1560_01161 PF00148 Nitrogenase component 1 type Oxidoreductase SynA1560_01161 PF08369 Proto-chlorophyllide reductase 57 kD subunit SynA1560_01162 PF00148 Nitrogenase component 1 type Oxidoreductase SynA1560_01165 PF01725 Ham1 family SynA1560_01166 PF00936 BMC domain SynA1560_01167 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain SynA1560_01167 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain SynA1560_01168 PF00101 Ribulose bisphosphate carboxylase, small chain SynA1560_01173 PF00936 BMC domain SynA1560_01174 PF00361 Proton-conducting membrane transporter SynA1560_01174 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus SynA1560_01174 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus SynA1560_01175 PF00361 Proton-conducting membrane transporter SynA1560_01178 PF00004 ATPase family associated with various cellular activities (AAA) SynA1560_01178 PF17866 AAA lid domain SynA1560_01180 PF01042 Endoribonuclease L-PSP SynA1560_01181 PF17845 FbpC C-terminal regulatory nucleotide binding domain SynA1560_01181 PF00005 ABC transporter SynA1560_01182 PF00753 Metallo-beta-lactamase superfamily SynA1560_01182 PF16123 Hydroxyacylglutathione hydrolase C-terminus SynA1560_01183 PF01634 ATP phosphoribosyltransferase SynA1560_01184 PF00664 ABC transporter transmembrane region SynA1560_01184 PF00005 ABC transporter SynA1560_01185 PF00561 alpha/beta hydrolase fold SynA1560_01186 PF00583 Acetyltransferase (GNAT) family SynA1560_01189 PF13180 PDZ domain SynA1560_01190 PF11638 DnaA N-terminal domain SynA1560_01190 PF08299 Bacterial dnaA protein helix-turn-helix SynA1560_01190 PF00308 Bacterial dnaA protein SynA1560_01195 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SynA1560_01195 PF07992 Pyridine nucleotide-disulphide oxidoreductase SynA1560_01196 PF00732 GMC oxidoreductase SynA1560_01196 PF05199 GMC oxidoreductase SynA1560_01197 PF00510 Cytochrome c oxidase subunit III SynA1560_01198 PF00115 Cytochrome C and Quinol oxidase polypeptide I SynA1560_01199 PF02790 Cytochrome C oxidase subunit II, transmembrane domain SynA1560_01199 PF00116 Cytochrome C oxidase subunit II, periplasmic domain SynA1560_01203 PF01699 Sodium/calcium exchanger protein SynA1560_01205 PF00916 Sulfate permease family SynA1560_01205 PF01740 STAS domain SynA1560_01206 PF01979 Amidohydrolase family SynA1560_01209 PF01042 Endoribonuclease L-PSP SynA1560_01215 PF05199 GMC oxidoreductase SynA1560_01215 PF00732 GMC oxidoreductase SynA1560_01215 PF05199 GMC oxidoreductase SynA1560_01215 PF00732 GMC oxidoreductase SynA1560_01218 PF10716 NADH dehydrogenase transmembrane subunit SynA1560_01220 PF00290 Tryptophan synthase alpha chain SynA1560_01223 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SynA1560_01228 PF06803 Protein of unknown function (DUF1232) SynA1560_01229 PF04545 Sigma-70, region 4 SynA1560_01229 PF04539 Sigma-70 region 3 SynA1560_01229 PF04542 Sigma-70 region 2 SynA1560_01229 PF00140 Sigma-70 factor, region 1.2 SynA1560_01234 PF03734 L,D-transpeptidase catalytic domain SynA1560_01234 PF01476 LysM domain SynA1560_01238 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase SynA1560_01238 PF01502 Phosphoribosyl-AMP cyclohydrolase SynA1560_01240 PF00326 Prolyl oligopeptidase family SynA1560_01240 PF07676 WD40-like Beta Propeller Repeat SynA1560_01243 PF07724 AAA domain (Cdc48 subfamily) SynA1560_01243 PF00004 ATPase family associated with various cellular activities (AAA) SynA1560_01243 PF17871 AAA lid domain SynA1560_01243 PF02861 Clp amino terminal domain, pathogenicity island component SynA1560_01243 PF10431 C-terminal, D2-small domain, of ClpB protein SynA1560_01259 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SynA1560_01260 PF00127 Copper binding proteins, plastocyanin/azurin family SynA1560_01262 PF01208 Uroporphyrinogen decarboxylase (URO-D) SynA1560_01263 PF02806 Alpha amylase, C-terminal all-beta domain SynA1560_01263 PF00128 Alpha amylase, catalytic domain SynA1560_01263 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SynA1560_01268 PF10726 Protein of function (DUF2518) SynA1560_01270 PF00480 ROK family SynA1560_01271 PF00171 Aldehyde dehydrogenase family SynA1560_01272 PF02152 Dihydroneopterin aldolase SynA1560_01278 PF01432 Peptidase family M3 SynA1560_01279 PF00361 Proton-conducting membrane transporter SynA1560_01280 PF08544 GHMP kinases C terminal SynA1560_01280 PF00288 GHMP kinases N terminal domain SynA1560_01281 PF02685 Glucokinase SynA1560_01283 PF03129 Anticodon binding domain SynA1560_01283 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SynA1560_01283 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SynA1560_01284 PF10792 Protein of unknown function (DUF2605) SynA1560_01287 PF00579 tRNA synthetases class I (W and Y) SynA1560_01292 PF00124 Photosynthetic reaction centre protein SynA1560_01294 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SynA1560_01294 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SynA1560_01297 PF00141 Peroxidase SynA1560_01302 PF00762 Ferrochelatase SynA1560_01303 PF08543 Phosphomethylpyrimidine kinase SynA1560_01304 PF00730 HhH-GPD superfamily base excision DNA repair protein SynA1560_01309 PF01694 Rhomboid family SynA1560_01319 PF01062 Bestrophin, RFP-TM, chloride channel SynA1560_01341 PF00128 Alpha amylase, catalytic domain SynA1560_01341 PF16657 Maltogenic Amylase, C-terminal domain SynA1560_01341 PF02903 Alpha amylase, N-terminal ig-like domain SynA1560_01388 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SynA1560_01391 PF02567 Phenazine biosynthesis-like protein SynA1560_01393 PF00106 short chain dehydrogenase SynA1560_01395 PF00664 ABC transporter transmembrane region SynA1560_01395 PF00005 ABC transporter SynA1560_01396 PF03412 Peptidase C39 family SynA1560_01396 PF00664 ABC transporter transmembrane region SynA1560_01396 PF00005 ABC transporter SynA1560_01399 PF01556 DnaJ C terminal domain SynA1560_01399 PF00684 DnaJ central domain SynA1560_01399 PF00226 DnaJ domain SynA1560_01417 PF00427 Phycobilisome Linker polypeptide SynA1560_01417 PF01383 CpcD/allophycocyanin linker domain SynA1560_01426 PF00106 short chain dehydrogenase SynA1560_01428 PF00111 2Fe-2S iron-sulfur cluster binding domain SynA1560_01433 PF07444 Ycf66 protein N-terminus SynA1560_01437 PF00795 Carbon-nitrogen hydrolase SynA1560_01440 PF02769 AIR synthase related protein, C-terminal domain SynA1560_01440 PF00586 AIR synthase related protein, N-terminal domain SynA1560_01446 PF07862 Nif11 domain SynA1560_01451 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SynA1560_01451 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SynA1560_01464 PF00072 Response regulator receiver domain SynA1560_01464 PF00196 Bacterial regulatory proteins, luxR family SynA1560_01473 PF00067 Cytochrome P450 SynA1560_01476 PF17757 UvrB interaction domain SynA1560_01476 PF03461 TRCF domain SynA1560_01476 PF02559 CarD-like/TRCF domain SynA1560_01476 PF00270 DEAD/DEAH box helicase SynA1560_01476 PF00271 Helicase conserved C-terminal domain SynA1560_01486 PF00595 PDZ domain SynA1560_01486 PF03572 Peptidase family S41 SynA1560_01487 PF04551 GcpE protein SynA1560_01488 PF03167 Uracil DNA glycosylase superfamily SynA1560_01490 PF00155 Aminotransferase class I and II SynA1560_01492 PF03466 LysR substrate binding domain SynA1560_01492 PF00005 ABC transporter SynA1560_01493 PF00528 Binding-protein-dependent transport system inner membrane component SynA1560_01499 PF01022 Bacterial regulatory protein, arsR family SynA1560_01500 PF00924 Mechanosensitive ion channel SynA1560_01501 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SynA1560_01501 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SynA1560_01512 PF00005 ABC transporter SynA1560_01513 PF00528 Binding-protein-dependent transport system inner membrane component SynA1560_01515 PF00528 Binding-protein-dependent transport system inner membrane component SynA1560_01516 PF00497 Bacterial extracellular solute-binding proteins, family 3 SynA1560_01518 PF00916 Sulfate permease family SynA1560_01518 PF01740 STAS domain SynA1560_01520 PF01903 CbiX SynA1560_01522 PF05199 GMC oxidoreductase SynA1560_01522 PF00732 GMC oxidoreductase SynA1560_01527 PF11780 Protein of unknown function (DUF3318) SynA1560_01528 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SynA1560_01528 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SynA1560_01528 PF02142 MGS-like domain SynA1560_01530 PF01235 Sodium:alanine symporter family SynA1560_01532 PF00005 ABC transporter SynA1560_01532 PF00664 ABC transporter transmembrane region SynA1560_01534 PF00121 Triosephosphate isomerase SynA1560_01535 PF00809 Pterin binding enzyme SynA1560_01537 PF11965 Domain of unknown function (DUF3479) SynA1560_01537 PF02514 CobN/Magnesium Chelatase SynA1560_01539 PF05173 Dihydrodipicolinate reductase, C-terminus SynA1560_01539 PF01113 Dihydrodipicolinate reductase, N-terminus SynA1560_01541 PF00762 Ferrochelatase SynA1560_01542 PF01494 FAD binding domain SynA1560_01544 PF00156 Phosphoribosyl transferase domain SynA1560_01550 PF00072 Response regulator receiver domain SynA1560_01550 PF00486 Transcriptional regulatory protein, C terminal SynA1560_01554 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SynA1560_01554 PF00512 His Kinase A (phospho-acceptor) domain SynA1560_01554 PF00672 HAMP domain SynA1560_01555 PF03976 Polyphosphate kinase 2 (PPK2) SynA1560_01560 PF00834 Ribulose-phosphate 3 epimerase family SynA1560_01561 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded SynA1560_01562 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain SynA1560_01562 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain SynA1560_01562 PF01488 Shikimate / quinate 5-dehydrogenase SynA1560_01563 PF00483 Nucleotidyl transferase SynA1560_01564 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain SynA1560_01564 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SynA1560_01565 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SynA1560_01568 PF00920 Dehydratase family SynA1560_01571 PF00805 Pentapeptide repeats (8 copies) SynA1560_01572 PF02492 CobW/HypB/UreG, nucleotide-binding domain SynA1560_01572 PF07683 Cobalamin synthesis protein cobW C-terminal domain SynA1560_01581 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase SynA1560_01583 PF17676 LD-carboxypeptidase C-terminal domain SynA1560_01583 PF02016 LD-carboxypeptidase N-terminal domain SynA1560_01590 PF01116 Fructose-bisphosphate aldolase class-II SynA1560_01592 PF00274 Fructose-bisphosphate aldolase class-I SynA1560_01594 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SynA1560_01594 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SynA1560_01596 PF01039 Carboxyl transferase domain SynA1560_01596 PF17848 Acetyl-coA carboxylase zinc finger domain SynA1560_01598 PF06750 Bacterial Peptidase A24 N-terminal domain SynA1560_01598 PF01478 Type IV leader peptidase family SynA1560_01600 PF00485 Phosphoribulokinase / Uridine kinase family SynA1560_01601 PF00180 Isocitrate/isopropylmalate dehydrogenase SynA1560_01602 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD SynA1560_01602 PF00132 Bacterial transferase hexapeptide (six repeats) SynA1560_01603 PF01472 PUA domain SynA1560_01603 PF00696 Amino acid kinase family SynA1560_01606 PF03652 Holliday junction resolvase SynA1560_01610 PF00072 Response regulator receiver domain SynA1560_01610 PF12452 Protein of unknown function (DUF3685) SynA1560_01612 PF00977 Histidine biosynthesis protein SynA1560_01614 PF01066 CDP-alcohol phosphatidyltransferase SynA1560_01615 PF00478 IMP dehydrogenase / GMP reductase domain SynA1560_01615 PF00571 CBS domain SynA1560_01623 PF07885 Ion channel SynA1560_01623 PF00027 Cyclic nucleotide-binding domain SynA1560_01625 PF00462 Glutaredoxin SynA1560_01629 PF00005 ABC transporter SynA1560_01662 PF00271 Helicase conserved C-terminal domain SynA1560_01662 PF08494 DEAD/H associated SynA1560_01662 PF00270 DEAD/DEAH box helicase SynA1560_01669 PF01068 ATP dependent DNA ligase domain SynA1560_01669 PF04675 DNA ligase N terminus SynA1560_01669 PF04679 ATP dependent DNA ligase C terminal region SynA1560_01671 PF04679 ATP dependent DNA ligase C terminal region SynA1560_01671 PF01068 ATP dependent DNA ligase domain SynA1560_01671 PF04675 DNA ligase N terminus SynA1560_01672 PF02445 Quinolinate synthetase A protein SynA1560_01679 PF01761 3-dehydroquinate synthase SynA1560_01680 PF00528 Binding-protein-dependent transport system inner membrane component SynA1560_01681 PF02222 ATP-grasp domain SynA1560_01681 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain SynA1560_01693 PF03209 PUCC protein SynA1560_01694 PF02617 ATP-dependent Clp protease adaptor protein ClpS SynA1560_01698 PF11264 Thylakoid formation protein SynA1560_01699 PF00574 Clp protease SynA1560_01700 PF01434 Peptidase family M41 SynA1560_01700 PF06480 FtsH Extracellular SynA1560_01700 PF17862 AAA+ lid domain SynA1560_01700 PF00004 ATPase family associated with various cellular activities (AAA) SynA1560_01701 PF12704 MacB-like periplasmic core domain SynA1560_01701 PF02687 FtsX-like permease family SynA1560_01701 PF00005 ABC transporter SynA1560_01702 PF00391 PEP-utilising enzyme, mobile domain SynA1560_01702 PF00224 Pyruvate kinase, barrel domain SynA1560_01702 PF02887 Pyruvate kinase, alpha/beta domain SynA1560_01704 PF02325 YGGT family SynA1560_01706 PF00291 Pyridoxal-phosphate dependent enzyme SynA1560_01706 PF00585 C-terminal regulatory domain of Threonine dehydratase SynA1560_01707 PF02779 Transketolase, pyrimidine binding domain SynA1560_01707 PF13292 1-deoxy-D-xylulose-5-phosphate synthase SynA1560_01707 PF02780 Transketolase, C-terminal domain SynA1560_01708 PF01241 Photosystem I psaG / psaK SynA1560_01710 PF10693 Protein of unknown function (DUF2499) SynA1560_01712 PF00005 ABC transporter SynA1560_01712 PF17912 MalK OB fold domain SynA1560_01713 PF00528 Binding-protein-dependent transport system inner membrane component SynA1560_01714 PF00528 Binding-protein-dependent transport system inner membrane component SynA1560_01715 PF01547 Bacterial extracellular solute-binding protein SynA1560_01716 PF00982 Glycosyltransferase family 20 SynA1560_01717 PF00578 AhpC/TSA family SynA1560_01718 PF00830 Ribosomal L28 family SynA1560_01719 PF00183 Hsp90 protein SynA1560_01719 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SynA1560_01721 PF13393 Histidyl-tRNA synthetase SynA1560_01722 PF00459 Inositol monophosphatase family SynA1560_01725 PF00005 ABC transporter SynA1560_01726 PF00528 Binding-protein-dependent transport system inner membrane component SynA1560_01727 PF00528 Binding-protein-dependent transport system inner membrane component SynA1560_01728 PF00012 Hsp70 protein SynA1560_01729 PF01556 DnaJ C terminal domain SynA1560_01729 PF00226 DnaJ domain SynA1560_01731 PF13580 SIS domain SynA1560_01732 PF01048 Phosphorylase superfamily SynA1560_01733 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SynA1560_01734 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase SynA1560_01734 PF00925 GTP cyclohydrolase II SynA1560_01735 PF02774 Semialdehyde dehydrogenase, dimerisation domain SynA1560_01735 PF01118 Semialdehyde dehydrogenase, NAD binding domain SynA1560_01736 PF00551 Formyl transferase SynA1560_01742 PF00342 Phosphoglucose isomerase SynA1560_01743 PF09334 tRNA synthetases class I (M) SynA1560_01743 PF08264 Anticodon-binding domain of tRNA SynA1560_01743 PF13603 Leucyl-tRNA synthetase, Domain 2 SynA1560_01743 PF00133 tRNA synthetases class I (I, L, M and V) SynA1560_01745 PF01678 Diaminopimelate epimerase SynA1560_01746 PF00266 Aminotransferase class-V SynA1560_01749 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family SynA1560_01751 PF01467 Cytidylyltransferase-like SynA1560_01752 PF08459 UvrC Helix-hairpin-helix N-terminal SynA1560_01752 PF02151 UvrB/uvrC motif SynA1560_01752 PF01541 GIY-YIG catalytic domain SynA1560_01754 PF04244 Deoxyribodipyrimidine photo-lyase-related protein SynA1560_01755 PF03653 Uncharacterised protein family (UPF0093) SynA1560_01758 PF02514 CobN/Magnesium Chelatase SynA1560_01759 PF01063 Amino-transferase class IV SynA1560_01760 PF02574 Homocysteine S-methyltransferase SynA1560_01760 PF00809 Pterin binding enzyme SynA1560_01760 PF02965 Vitamin B12 dependent methionine synthase, activation domain SynA1560_01760 PF02607 B12 binding domain SynA1560_01760 PF02310 B12 binding domain SynA1560_01764 PF00106 short chain dehydrogenase SynA1560_01765 PF08486 Stage II sporulation protein SynA1560_01767 PF04542 Sigma-70 region 2 SynA1560_01767 PF04539 Sigma-70 region 3 SynA1560_01767 PF04545 Sigma-70, region 4 SynA1560_01773 PF00502 Phycobilisome protein SynA1560_01774 PF13847 Methyltransferase domain SynA1560_01775 PF01588 Putative tRNA binding domain SynA1560_01775 PF03147 Ferredoxin-fold anticodon binding domain SynA1560_01775 PF03484 tRNA synthetase B5 domain SynA1560_01775 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain SynA1560_01775 PF03483 B3/4 domain SynA1560_01776 PF00471 Ribosomal protein L33 SynA1560_01777 PF01084 Ribosomal protein S18 SynA1560_01778 PF00773 RNB domain SynA1560_01780 PF08264 Anticodon-binding domain of tRNA SynA1560_01780 PF00133 tRNA synthetases class I (I, L, M and V) SynA1560_01780 PF09334 tRNA synthetases class I (M) SynA1560_01784 PF03040 CemA family SynA1560_01785 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase SynA1560_01786 PF00588 SpoU rRNA Methylase family SynA1560_01787 PF01551 Peptidase family M23 SynA1560_01787 PF01476 LysM domain SynA1560_01790 PF10417 C-terminal domain of 1-Cys peroxiredoxin SynA1560_01790 PF00578 AhpC/TSA family SynA1560_01791 PF03699 Uncharacterised protein family (UPF0182) SynA1560_01792 PF06480 FtsH Extracellular SynA1560_01792 PF17862 AAA+ lid domain SynA1560_01792 PF01434 Peptidase family M41 SynA1560_01792 PF00004 ATPase family associated with various cellular activities (AAA) SynA1560_01793 PF01783 Ribosomal L32p protein family SynA1560_01796 PF13419 Haloacid dehalogenase-like hydrolase SynA1560_01797 PF01368 DHH family SynA1560_01797 PF17768 RecJ OB domain SynA1560_01797 PF02272 DHHA1 domain SynA1560_01797 PF10141 Single-strand DNA-specific exonuclease, C terminal domain SynA1560_01799 PF05969 Photosystem II complex subunit Ycf12 SynA1560_01802 PF01169 Uncharacterized protein family UPF0016 SynA1560_01804 PF00773 RNB domain SynA1560_01804 PF17876 Cold shock domain SynA1560_01804 PF00575 S1 RNA binding domain SynA1560_01804 PF08206 Ribonuclease B OB domain SynA1560_01805 PF02441 Flavoprotein SynA1560_01808 PF02915 Rubrerythrin SynA1560_01809 PF01523 Putative modulator of DNA gyrase SynA1560_01811 PF02911 Formyl transferase, C-terminal domain SynA1560_01811 PF00551 Formyl transferase SynA1560_01812 PF00270 DEAD/DEAH box helicase SynA1560_01812 PF00271 Helicase conserved C-terminal domain SynA1560_01816 PF03741 Integral membrane protein TerC family SynA1560_01828 PF07862 Nif11 domain SynA1560_01830 PF07862 Nif11 domain SynA1560_01832 PF07862 Nif11 domain SynA1560_01837 PF00672 HAMP domain SynA1560_01837 PF00512 His Kinase A (phospho-acceptor) domain SynA1560_01837 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SynA1560_01838 PF00072 Response regulator receiver domain SynA1560_01838 PF00486 Transcriptional regulatory protein, C terminal SynA1560_01841 PF00132 Bacterial transferase hexapeptide (six repeats) SynA1560_01842 PF06298 Photosystem II protein Y (PsbY) SynA1560_01843 PF01134 Glucose inhibited division protein A SynA1560_01845 PF01593 Flavin containing amine oxidoreductase SynA1560_01849 PF00486 Transcriptional regulatory protein, C terminal SynA1560_01849 PF00072 Response regulator receiver domain SynA1560_01851 PF00561 alpha/beta hydrolase fold SynA1560_01852 PF00462 Glutaredoxin SynA1560_01853 PF01722 BolA-like protein SynA1560_01856 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ SynA1560_01857 PF10674 Protein of unknown function (DUF2488) SynA1560_01868 PF01475 Ferric uptake regulator family SynA1560_01870 PF04472 Cell division protein SepF SynA1560_01872 PF09506 Glucosylglycerol-phosphate phosphatase (Salt_tol_Pase) SynA1560_01876 PF00149 Calcineurin-like phosphoesterase SynA1560_01876 PF12320 Type 5 capsule protein repressor C-terminal domain SynA1560_01884 PF01053 Cys/Met metabolism PLP-dependent enzyme SynA1560_01885 PF04204 Homoserine O-succinyltransferase SynA1560_01902 PF01578 Cytochrome C assembly protein SynA1560_01904 PF00005 ABC transporter SynA1560_01907 PF00009 Elongation factor Tu GTP binding domain SynA1560_01907 PF14492 Elongation Factor G, domain II SynA1560_01907 PF00679 Elongation factor G C-terminus SynA1560_01907 PF03144 Elongation factor Tu domain 2 SynA1560_01908 PF12392 Collagenase SynA1560_01908 PF01136 Peptidase family U32 SynA1560_01910 PF01494 FAD binding domain SynA1560_01911 PF02092 Glycyl-tRNA synthetase beta subunit SynA1560_01912 PF01077 Nitrite and sulphite reductase 4Fe-4S domain SynA1560_01912 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain SynA1560_01913 PF01427 D-ala-D-ala dipeptidase SynA1560_01914 PF00270 DEAD/DEAH box helicase SynA1560_01914 PF00271 Helicase conserved C-terminal domain SynA1560_01914 PF17191 RecG wedge domain SynA1560_01916 PF00889 Elongation factor TS SynA1560_01917 PF00318 Ribosomal protein S2 SynA1560_01918 PF00535 Glycosyl transferase family 2 SynA1560_01920 PF00005 ABC transporter SynA1560_01923 PF05996 Ferredoxin-dependent bilin reductase SynA1560_01924 PF00675 Insulinase (Peptidase family M16) SynA1560_01924 PF05193 Peptidase M16 inactive domain SynA1560_01928 PF01252 Signal peptidase (SPase) II SynA1560_01929 PF00912 Transglycosylase SynA1560_01929 PF00905 Penicillin binding protein transpeptidase domain SynA1560_01929 PF14814 Bifunctional transglycosylase second domain SynA1560_01931 PF00282 Pyridoxal-dependent decarboxylase conserved domain SynA1560_01932 PF00266 Aminotransferase class-V SynA1560_01933 PF00502 Phycobilisome protein SynA1560_01934 PF00120 Glutamine synthetase, catalytic domain SynA1560_01934 PF03951 Glutamine synthetase, beta-Grasp domain SynA1560_01937 PF01209 ubiE/COQ5 methyltransferase family SynA1560_01942 PF05419 GUN4-like SynA1560_01942 PF16416 ARM-like repeat domain, GUN4-N terminal SynA1560_01944 PF03912 Psb28 protein SynA1560_01945 PF01594 AI-2E family transporter SynA1560_01950 PF02355 Protein export membrane protein SynA1560_01951 PF07549 SecD/SecF GG Motif SynA1560_01951 PF02355 Protein export membrane protein SynA1560_01952 PF02780 Transketolase, C-terminal domain SynA1560_01952 PF00364 Biotin-requiring enzyme SynA1560_01952 PF02779 Transketolase, pyrimidine binding domain SynA1560_01955 PF08544 GHMP kinases C terminal SynA1560_01955 PF00288 GHMP kinases N terminal domain SynA1560_01956 PF00398 Ribosomal RNA adenine dimethylase SynA1560_01957 PF00485 Phosphoribulokinase / Uridine kinase family SynA1560_01962 PF02021 Uncharacterised protein family UPF0102 SynA1560_01966 PF02590 Predicted SPOUT methyltransferase SynA1560_01973 PF00717 Peptidase S24-like SynA1560_01974 PF13438 Domain of unknown function (DUF4113) SynA1560_01974 PF00817 impB/mucB/samB family SynA1560_01974 PF11799 impB/mucB/samB family C-terminal domain SynA1560_01981 PF10410 DnaB-helicase binding domain of primase SynA1560_01981 PF08275 DNA primase catalytic core, N-terminal domain SynA1560_01981 PF01807 CHC2 zinc finger SynA1560_01987 PF07499 RuvA, C-terminal domain SynA1560_01987 PF01330 RuvA N terminal domain SynA1560_01988 PF00312 Ribosomal protein S15 SynA1560_01990 PF02811 PHP domain SynA1560_01990 PF14579 Helix-hairpin-helix motif SynA1560_01990 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SynA1560_01990 PF01336 OB-fold nucleic acid binding domain SynA1560_01990 PF07733 Bacterial DNA polymerase III alpha NTPase domain SynA1560_01991 PF01425 Amidase SynA1560_01993 PF00588 SpoU rRNA Methylase family SynA1560_01993 PF08032 RNA 2'-O ribose methyltransferase substrate binding SynA1560_01994 PF00636 Ribonuclease III domain SynA1560_01996 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain SynA1560_01996 PF00117 Glutamine amidotransferase class-I SynA1560_01997 PF00591 Glycosyl transferase family, a/b domain SynA1560_01997 PF02885 Glycosyl transferase family, helical bundle domain SynA1560_01998 PF00664 ABC transporter transmembrane region SynA1560_01998 PF00005 ABC transporter SynA1560_02000 PF01625 Peptide methionine sulfoxide reductase SynA1560_02004 PF13545 Crp-like helix-turn-helix domain SynA1560_02007 PF02811 PHP domain SynA1560_02007 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SynA1560_02007 PF00929 Exonuclease SynA1560_02007 PF07733 Bacterial DNA polymerase III alpha NTPase domain SynA1560_02007 PF14579 Helix-hairpin-helix motif SynA1560_02008 PF00578 AhpC/TSA family SynA1560_02012 PF16177 Acetyl-coenzyme A synthetase N-terminus SynA1560_02012 PF00501 AMP-binding enzyme SynA1560_02012 PF13193 AMP-binding enzyme C-terminal domain SynA1560_02016 PF13419 Haloacid dehalogenase-like hydrolase SynA1560_02017 PF00348 Polyprenyl synthetase SynA1560_02018 PF01177 Asp/Glu/Hydantoin racemase SynA1560_02019 PF11741 AMIN domain SynA1560_02019 PF01520 N-acetylmuramoyl-L-alanine amidase SynA1560_02020 PF00795 Carbon-nitrogen hydrolase SynA1560_02021 PF04029 2-phosphosulpholactate phosphatase SynA1560_02022 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase SynA1560_02023 PF13416 Bacterial extracellular solute-binding protein SynA1560_02024 PF13640 2OG-Fe(II) oxygenase superfamily SynA1560_02026 PF04966 Carbohydrate-selective porin, OprB family SynA1560_02026 PF00395 S-layer homology domain SynA1560_02028 PF00395 S-layer homology domain SynA1560_02028 PF04966 Carbohydrate-selective porin, OprB family SynA1560_02032 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SynA1560_02039 PF00520 Ion transport protein SynA1560_02039 PF00027 Cyclic nucleotide-binding domain SynA1560_02041 PF00005 ABC transporter SynA1560_02041 PF06472 ABC transporter transmembrane region 2 SynA1560_02042 PF14602 Hexapeptide repeat of succinyl-transferase SynA1560_02042 PF00132 Bacterial transferase hexapeptide (six repeats) SynA1560_02042 PF12804 MobA-like NTP transferase domain SynA1560_02044 PF02875 Mur ligase family, glutamate ligase domain SynA1560_02044 PF01225 Mur ligase family, catalytic domain SynA1560_02044 PF08245 Mur ligase middle domain SynA1560_02046 PF08323 Starch synthase catalytic domain SynA1560_02046 PF00534 Glycosyl transferases group 1 SynA1560_02047 PF03734 L,D-transpeptidase catalytic domain SynA1560_02047 PF01476 LysM domain SynA1560_02048 PF00378 Enoyl-CoA hydratase/isomerase SynA1560_02049 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SynA1560_02049 PF16582 Middle domain of thiamine pyrophosphate SynA1560_02049 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SynA1560_02050 PF10502 Signal peptidase, peptidase S26 SynA1560_02053 PF03466 LysR substrate binding domain SynA1560_02053 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SynA1560_02055 PF00487 Fatty acid desaturase SynA1560_02061 PF01593 Flavin containing amine oxidoreductase SynA1560_02063 PF01266 FAD dependent oxidoreductase SynA1560_02064 PF00394 Multicopper oxidase SynA1560_02064 PF07732 Multicopper oxidase SynA1560_02064 PF07731 Multicopper oxidase SynA1560_02067 PF00205 Thiamine pyrophosphate enzyme, central domain SynA1560_02067 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SynA1560_02067 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SynA1560_02082 PF01569 PAP2 superfamily SynA1560_02099 PF01297 Zinc-uptake complex component A periplasmic SynA1560_02100 PF00950 ABC 3 transport family SynA1560_02101 PF00005 ABC transporter SynA1560_02104 PF03773 Predicted permease SynA1560_02105 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SynA1560_02108 PF00950 ABC 3 transport family SynA1560_02110 PF00005 ABC transporter SynA1560_02111 PF01297 Zinc-uptake complex component A periplasmic SynA1560_02130 PF03466 LysR substrate binding domain SynA1560_02130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SynA1560_02135 PF00080 Copper/zinc superoxide dismutase (SODC) SynA1560_02136 PF00692 dUTPase SynA1560_02157 PF00106 short chain dehydrogenase SynA1560_02166 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 SynA1560_02166 PF00535 Glycosyl transferase family 2 SynA1560_02170 PF04294 VanW like protein SynA1560_02175 PF04539 Sigma-70 region 3 SynA1560_02175 PF04542 Sigma-70 region 2 SynA1560_02175 PF04545 Sigma-70, region 4 SynA1560_02176 PF01940 Integral membrane protein DUF92 SynA1560_02181 PF00005 ABC transporter SynA1560_02182 PF01430 Hsp33 protein SynA1560_02188 PF16658 Class II release factor RF3, C-terminal domain SynA1560_02188 PF00009 Elongation factor Tu GTP binding domain SynA1560_02189 PF08241 Methyltransferase domain SynA1560_02190 PF05552 Conserved TM helix SynA1560_02190 PF00924 Mechanosensitive ion channel SynA1560_02191 PF17975 Ribonucleotide reductase alpha domain SynA1560_02194 PF07862 Nif11 domain SynA1560_02195 PF07862 Nif11 domain SynA1560_02209 PF02796 Helix-turn-helix domain of resolvase SynA1560_02209 PF00239 Resolvase, N terminal domain SynA1560_02211 PF00005 ABC transporter SynA1560_02211 PF03459 TOBE domain SynA1560_02238 PF00149 Calcineurin-like phosphoesterase SynA1560_02239 PF17946 RecC C-terminal domain SynA1560_02240 PF12705 PD-(D/E)XK nuclease superfamily SynA1560_02240 PF00580 UvrD/REP helicase N-terminal domain SynA1560_02240 PF13361 UvrD-like helicase C-terminal domain SynA1560_02241 PF13538 UvrD-like helicase C-terminal domain SynA1560_02242 PF00483 Nucleotidyl transferase SynA1560_02242 PF01050 Mannose-6-phosphate isomerase SynA1560_02244 PF00270 DEAD/DEAH box helicase SynA1560_02244 PF03880 DbpA RNA binding domain SynA1560_02244 PF12343 Cold shock protein DEAD box A SynA1560_02244 PF00271 Helicase conserved C-terminal domain SynA1560_02246 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) SynA1560_02248 PF00005 ABC transporter SynA1560_02248 PF00664 ABC transporter transmembrane region SynA1560_02249 PF00582 Universal stress protein family SynA1560_02249 PF00999 Sodium/hydrogen exchanger family SynA1560_02250 PF03816 Cell envelope-related transcriptional attenuator domain SynA1560_02257 PF02132 RecR protein SynA1560_02257 PF13662 Toprim domain SynA1560_02258 PF04055 Radical SAM superfamily SynA1560_02261 PF17773 UPF0176 acylphosphatase like domain SynA1560_02262 PF04055 Radical SAM superfamily SynA1560_02262 PF06968 Biotin and Thiamin Synthesis associated domain SynA1560_02263 PF01255 Putative undecaprenyl diphosphate synthase SynA1560_02264 PF02457 DisA bacterial checkpoint controller nucleotide-binding SynA1560_02265 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SynA1560_02265 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SynA1560_02267 PF02861 Clp amino terminal domain, pathogenicity island component SynA1560_02267 PF00004 ATPase family associated with various cellular activities (AAA) SynA1560_02267 PF07724 AAA domain (Cdc48 subfamily) SynA1560_02267 PF17871 AAA lid domain SynA1560_02267 PF10431 C-terminal, D2-small domain, of ClpB protein SynA1560_02268 PF00465 Iron-containing alcohol dehydrogenase SynA1560_02269 PF08386 TAP-like protein SynA1560_02269 PF00561 alpha/beta hydrolase fold SynA1560_02272 PF01276 Orn/Lys/Arg decarboxylase, major domain SynA1560_02272 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain SynA1560_02273 PF03109 ABC1 family SynA1560_02275 PF04539 Sigma-70 region 3 SynA1560_02275 PF00140 Sigma-70 factor, region 1.2 SynA1560_02275 PF04542 Sigma-70 region 2 SynA1560_02275 PF04545 Sigma-70, region 4 SynA1560_02276 PF00486 Transcriptional regulatory protein, C terminal SynA1560_02276 PF00072 Response regulator receiver domain SynA1560_02277 PF00989 PAS fold SynA1560_02277 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SynA1560_02277 PF00512 His Kinase A (phospho-acceptor) domain SynA1560_02278 PF01479 S4 domain SynA1560_02278 PF00849 RNA pseudouridylate synthase SynA1560_02280 PF02446 4-alpha-glucanotransferase SynA1560_02281 PF13460 NAD(P)H-binding SynA1560_02281 PF11066 Protein of unknown function (DUF2867) SynA1560_02283 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SynA1560_02283 PF14572 Phosphoribosyl synthetase-associated domain SynA1560_02287 PF01433 Peptidase family M1 domain SynA1560_02287 PF17432 Domain of unknown function (DUF3458_C) ARM repeats SynA1560_02287 PF11940 Domain of unknown function (DUF3458) Ig-like fold SynA1560_02290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SynA1560_02290 PF07689 KaiB domain SynA1560_02293 PF00175 Oxidoreductase NAD-binding domain SynA1560_02293 PF01383 CpcD/allophycocyanin linker domain SynA1560_02293 PF00970 Oxidoreductase FAD-binding domain SynA1560_02294 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain SynA1560_02294 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain SynA1560_02295 PF10128 Glucose-6-phosphate dehydrogenase subunit SynA1560_02295 PF01471 Putative peptidoglycan binding domain SynA1560_02296 PF07685 CobB/CobQ-like glutamine amidotransferase domain SynA1560_02296 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain SynA1560_02297 PF00708 Acylphosphatase SynA1560_02301 PF00348 Polyprenyl synthetase SynA1560_02302 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain SynA1560_02302 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain SynA1560_02303 PF01966 HD domain SynA1560_02303 PF07698 7TM receptor with intracellular HD hydrolase SynA1560_02303 PF07697 7TM-HD extracellular SynA1560_02304 PF00849 RNA pseudouridylate synthase SynA1560_02308 PF01910 Thiamine-binding protein SynA1560_02312 PF00111 2Fe-2S iron-sulfur cluster binding domain SynA1560_02316 PF00528 Binding-protein-dependent transport system inner membrane component SynA1560_02317 PF00682 HMGL-like SynA1560_02317 PF08502 LeuA allosteric (dimerisation) domain SynA1560_02318 PF09210 Domain of unknown function (DUF1957) SynA1560_02318 PF03065 Glycosyl hydrolase family 57 SynA1560_02323 PF03989 DNA gyrase C-terminal domain, beta-propeller SynA1560_02323 PF00521 DNA gyrase/topoisomerase IV, subunit A SynA1560_02325 PF00478 IMP dehydrogenase / GMP reductase domain SynA1560_02326 PF00085 Thioredoxin SynA1560_02327 PF00117 Glutamine amidotransferase class-I SynA1560_02329 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SynA1560_02330 PF00588 SpoU rRNA Methylase family SynA1560_02333 PF01078 Magnesium chelatase, subunit ChlI SynA1560_02333 PF17863 AAA lid domain SynA1560_02334 PF02075 Crossover junction endodeoxyribonuclease RuvC SynA1560_02337 PF01812 5-formyltetrahydrofolate cyclo-ligase family SynA1560_02339 PF02657 Fe-S metabolism associated domain SynA1560_02340 PF01842 ACT domain SynA1560_02340 PF00742 Homoserine dehydrogenase SynA1560_02340 PF03447 Homoserine dehydrogenase, NAD binding domain SynA1560_02342 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SynA1560_02343 PF00528 Binding-protein-dependent transport system inner membrane component SynA1560_02353 PF01926 50S ribosome-binding GTPase SynA1560_02353 PF06071 Protein of unknown function (DUF933) SynA1560_02354 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SynA1560_02355 PF01612 3'-5' exonuclease SynA1560_02355 PF01367 5'-3' exonuclease, C-terminal SAM fold SynA1560_02355 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SynA1560_02355 PF00476 DNA polymerase family A SynA1560_02356 PF09190 DALR domain SynA1560_02356 PF01406 tRNA synthetases class I (C) catalytic domain SynA1560_02359 PF00209 Sodium:neurotransmitter symporter family SynA1560_02360 PF13288 DXP reductoisomerase C-terminal domain SynA1560_02360 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase SynA1560_02360 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain SynA1560_02363 PF02233 NAD(P) transhydrogenase beta subunit SynA1560_02364 PF05222 Alanine dehydrogenase/PNT, N-terminal domain SynA1560_02364 PF01262 Alanine dehydrogenase/PNT, C-terminal domain SynA1560_02364 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch SynA1560_02365 PF01262 Alanine dehydrogenase/PNT, C-terminal domain SynA1560_02365 PF05222 Alanine dehydrogenase/PNT, N-terminal domain SynA1560_02370 PF07992 Pyridine nucleotide-disulphide oxidoreductase SynA1560_02371 PF01176 Translation initiation factor 1A / IF-1 SynA1560_02373 PF00849 RNA pseudouridylate synthase SynA1560_02374 PF13847 Methyltransferase domain SynA1560_02376 PF01370 NAD dependent epimerase/dehydratase family SynA1560_02377 PF08041 PetM family of cytochrome b6f complex subunit 7 SynA1560_02379 PF00561 alpha/beta hydrolase fold SynA1560_02380 PF10369 Small subunit of acetolactate synthase SynA1560_02381 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SynA1560_02382 PF02392 Ycf4 SynA1560_02383 PF00124 Photosynthetic reaction centre protein SynA1560_02384 PF00421 Photosystem II protein SynA1560_02387 PF02545 Maf-like protein SynA1560_02390 PF00664 ABC transporter transmembrane region SynA1560_02390 PF00005 ABC transporter SynA1560_02391 PF03412 Peptidase C39 family SynA1560_02391 PF00005 ABC transporter SynA1560_02391 PF00664 ABC transporter transmembrane region SynA1560_02394 PF07685 CobB/CobQ-like glutamine amidotransferase domain SynA1560_02394 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain SynA1560_02399 PF01894 Uncharacterised protein family UPF0047 SynA1560_02406 PF00413 Matrixin SynA1560_02406 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) SynA1560_02406 PF08548 Peptidase M10 serralysin C terminal SynA1560_02416 PF00230 Major intrinsic protein SynA1560_02420 PF07862 Nif11 domain SynA1560_02421 PF07862 Nif11 domain SynA1560_02426 PF07228 Stage II sporulation protein E (SpoIIE) SynA1560_02426 PF00672 HAMP domain SynA1560_02431 PF07862 Nif11 domain SynA1560_02446 PF00717 Peptidase S24-like SynA1560_02446 PF01726 LexA DNA binding domain SynA1560_02450 PF12146 Serine aminopeptidase, S33 SynA1560_02456 PF07862 Nif11 domain SynA1560_02457 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SynA1560_02457 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SynA1560_02458 PF17862 AAA+ lid domain SynA1560_02458 PF06480 FtsH Extracellular SynA1560_02458 PF01434 Peptidase family M41 SynA1560_02458 PF00004 ATPase family associated with various cellular activities (AAA) SynA1560_02460 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SynA1560_02460 PF01872 RibD C-terminal domain SynA1560_02470 PF16347 Domain of unknown function (DUF4976) SynA1560_02470 PF00884 Sulfatase SynA1560_02472 PF03781 Sulfatase-modifying factor enzyme 1 SynA1560_02478 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SynA1560_02481 PF00072 Response regulator receiver domain SynA1560_02481 PF00486 Transcriptional regulatory protein, C terminal SynA1560_02482 PF01513 ATP-NAD kinase SynA1560_02485 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain SynA1560_02485 PF01409 tRNA synthetases class II core domain (F) SynA1560_02486 PF01975 Survival protein SurE SynA1560_02488 PF01687 Riboflavin kinase SynA1560_02488 PF06574 FAD synthetase SynA1560_02490 PF02581 Thiamine monophosphate synthase SynA1560_02490 PF17792 ThiD2 family SynA1560_02491 PF05690 Thiazole biosynthesis protein ThiG SynA1560_02491 PF02597 ThiS family SynA1560_02495 PF00731 AIR carboxylase SynA1560_02497 PF02542 YgbB family SynA1560_02498 PF01746 tRNA (Guanine-1)-methyltransferase SynA1560_02500 PF01926 50S ribosome-binding GTPase SynA1560_02500 PF07650 KH domain SynA1560_02502 PF01027 Inhibitor of apoptosis-promoting Bax1 SynA1560_02503 PF02562 PhoH-like protein SynA1560_02504 PF00886 Ribosomal protein S16 SynA1560_02505 PF02881 SRP54-type protein, helical bundle domain SynA1560_02505 PF00448 SRP54-type protein, GTPase domain SynA1560_02505 PF02978 Signal peptide binding domain SynA1560_02507 PF00676 Dehydrogenase E1 component SynA1560_02508 PF00850 Histone deacetylase domain SynA1560_02509 PF04545 Sigma-70, region 4 SynA1560_02509 PF04539 Sigma-70 region 3 SynA1560_02509 PF04542 Sigma-70 region 2 SynA1560_02509 PF00140 Sigma-70 factor, region 1.2 SynA1560_02510 PF01256 Carbohydrate kinase SynA1560_02510 PF03853 YjeF-related protein N-terminus SynA1560_02514 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SynA1560_02515 PF09055 Nickel-containing superoxide dismutase SynA1560_02518 PF00361 Proton-conducting membrane transporter SynA1560_02524 PF00218 Indole-3-glycerol phosphate synthase SynA1560_02525 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SynA1560_02525 PF07992 Pyridine nucleotide-disulphide oxidoreductase SynA1560_02526 PF08032 RNA 2'-O ribose methyltransferase substrate binding SynA1560_02526 PF00588 SpoU rRNA Methylase family SynA1560_02529 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SynA1560_02536 PF00202 Aminotransferase class-III SynA1560_02537 PF08245 Mur ligase middle domain SynA1560_02537 PF02875 Mur ligase family, glutamate ligase domain SynA1560_02544 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain SynA1560_02544 PF13378 Enolase C-terminal domain-like SynA1560_02545 PF00027 Cyclic nucleotide-binding domain SynA1560_02545 PF04960 Glutaminase SynA1560_02545 PF01740 STAS domain SynA1560_02546 PF00919 Uncharacterized protein family UPF0004 SynA1560_02546 PF01938 TRAM domain SynA1560_02546 PF04055 Radical SAM superfamily SynA1560_02547 PF01820 D-ala D-ala ligase N-terminus SynA1560_02547 PF07478 D-ala D-ala ligase C-terminus SynA1560_02550 PF12327 FtsZ family, C-terminal domain SynA1560_02550 PF00091 Tubulin/FtsZ family, GTPase domain SynA1560_02551 PF02548 Ketopantoate hydroxymethyltransferase SynA1560_02552 PF04055 Radical SAM superfamily SynA1560_02554 PF00574 Clp protease SynA1560_02555 PF00574 Clp protease SynA1560_02556 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain SynA1560_02556 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain SynA1560_02558 PF03186 CobD/Cbib protein SynA1560_02559 PF02397 Bacterial sugar transferase SynA1560_02567 PF05199 GMC oxidoreductase SynA1560_02567 PF00732 GMC oxidoreductase SynA1560_02568 PF07731 Multicopper oxidase SynA1560_02568 PF07732 Multicopper oxidase SynA1560_02574 PF02091 Glycyl-tRNA synthetase alpha subunit SynA1560_02576 PF01209 ubiE/COQ5 methyltransferase family SynA1560_02578 PF00977 Histidine biosynthesis protein SynA1560_02580 PF01040 UbiA prenyltransferase family SynA1560_02581 PF00905 Penicillin binding protein transpeptidase domain SynA1560_02581 PF00912 Transglycosylase SynA1560_02582 PF01189 16S rRNA methyltransferase RsmB/F SynA1560_02582 PF01029 NusB family SynA1560_02583 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain SynA1560_02585 PF00588 SpoU rRNA Methylase family SynA1560_02585 PF12105 SpoU, rRNA methylase, C-terminal SynA1560_02587 PF12911 N-terminal TM domain of oligopeptide transport permease C SynA1560_02587 PF00528 Binding-protein-dependent transport system inner membrane component SynA1560_02588 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) SynA1560_02588 PF00672 HAMP domain SynA1560_02588 PF00072 Response regulator receiver domain SynA1560_02588 PF01627 Hpt domain SynA1560_02588 PF00512 His Kinase A (phospho-acceptor) domain SynA1560_02588 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SynA1560_02590 PF00512 His Kinase A (phospho-acceptor) domain SynA1560_02590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SynA1560_02590 PF00672 HAMP domain SynA1560_02595 PF00072 Response regulator receiver domain SynA1560_02595 PF00486 Transcriptional regulatory protein, C terminal SynA1560_02596 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SynA1560_02596 PF00672 HAMP domain SynA1560_02596 PF00512 His Kinase A (phospho-acceptor) domain SynA1560_02597 PF00114 Pilin (bacterial filament) SynA1560_02597 PF07963 Prokaryotic N-terminal methylation motif SynA1560_02603 PF06421 GTP-binding protein LepA C-terminus SynA1560_02603 PF00679 Elongation factor G C-terminus SynA1560_02603 PF00009 Elongation factor Tu GTP binding domain SynA1560_02603 PF03144 Elongation factor Tu domain 2 SynA1560_02604 PF00893 Small Multidrug Resistance protein SynA1560_02606 PF06039 Malate:quinone oxidoreductase (Mqo) SynA1560_02607 PF01106 NifU-like domain SynA1560_02609 PF00266 Aminotransferase class-V SynA1560_02610 PF01225 Mur ligase family, catalytic domain SynA1560_02610 PF02875 Mur ligase family, glutamate ligase domain SynA1560_02610 PF08245 Mur ligase middle domain SynA1560_02612 PF01809 Putative membrane protein insertion efficiency factor SynA1560_02613 PF00163 Ribosomal protein S4/S9 N-terminal domain SynA1560_02613 PF01479 S4 domain SynA1560_02616 PF01053 Cys/Met metabolism PLP-dependent enzyme SynA1560_02617 PF01053 Cys/Met metabolism PLP-dependent enzyme SynA1560_02618 PF00291 Pyridoxal-phosphate dependent enzyme SynA1560_02620 PF02547 Queuosine biosynthesis protein SynA1560_02621 PF13520 Amino acid permease SynA1560_02622 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SynA1560_02622 PF00364 Biotin-requiring enzyme SynA1560_02622 PF02817 e3 binding domain SynA1560_02624 PF00501 AMP-binding enzyme SynA1560_02625 PF03099 Biotin/lipoate A/B protein ligase family SynA1560_02626 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein SynA1560_02626 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus SynA1560_02627 PF01791 DeoC/LacD family aldolase SynA1560_02628 PF11967 Recombination protein O N terminal SynA1560_02628 PF02565 Recombination protein O C terminal SynA1560_02630 PF00534 Glycosyl transferases group 1 SynA1560_02630 PF13439 Glycosyltransferase Family 4 SynA1560_02631 PF03807 NADP oxidoreductase coenzyme F420-dependent SynA1560_02631 PF14748 Pyrroline-5-carboxylate reductase dimerisation SynA1560_02632 PF04472 Cell division protein SepF SynA1560_02633 PF01168 Alanine racemase, N-terminal domain SynA1560_02635 PF02361 Cobalt transport protein SynA1560_02636 PF01926 50S ribosome-binding GTPase SynA1560_02636 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal SynA1560_02637 PF17964 Bacterial Ig domain SynA1560_02637 PF03734 L,D-transpeptidase catalytic domain SynA1560_02640 PF01207 Dihydrouridine synthase (Dus) SynA1560_02642 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SynA1560_02643 PF03079 ARD/ARD' family SynA1560_02647 PF01220 Dehydroquinase class II SynA1560_02652 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SynA1560_02652 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SynA1560_02653 PF01266 FAD dependent oxidoreductase SynA1560_02653 PF16901 C-terminal domain of alpha-glycerophosphate oxidase SynA1560_02654 PF16657 Maltogenic Amylase, C-terminal domain SynA1560_02654 PF00128 Alpha amylase, catalytic domain SynA1560_02655 PF00171 Aldehyde dehydrogenase family SynA1560_02656 PF05257 CHAP domain SynA1560_02656 PF01476 LysM domain SynA1560_02657 PF16124 RecQ zinc-binding SynA1560_02657 PF00570 HRDC domain SynA1560_02657 PF00271 Helicase conserved C-terminal domain SynA1560_02657 PF00270 DEAD/DEAH box helicase SynA1560_02657 PF09382 RQC domain SynA1560_02659 PF02427 Photosystem I reaction centre subunit IV / PsaE SynA1560_02660 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain SynA1560_02660 PF06827 Zinc finger found in FPG and IleRS SynA1560_02660 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain SynA1560_02661 PF00596 Class II Aldolase and Adducin N-terminal domain SynA1560_02669 PF00459 Inositol monophosphatase family SynA1560_02672 PF02673 Bacitracin resistance protein BacA SynA1560_02674 PF06514 Photosystem II 12 kDa extrinsic protein (PsbU) SynA1560_02675 PF02910 Fumarate reductase flavoprotein C-term SynA1560_02675 PF00890 FAD binding domain SynA1560_02676 PF07884 Vitamin K epoxide reductase family SynA1560_02677 PF00919 Uncharacterized protein family UPF0004 SynA1560_02677 PF04055 Radical SAM superfamily SynA1560_02677 PF18693 TRAM domain SynA1560_02680 PF02310 B12 binding domain SynA1560_02680 PF04055 Radical SAM superfamily SynA1560_02680 PF13282 Domain of unknown function (DUF4070) SynA1560_02681 PF14251 Domain of unknown function (DUF4346) SynA1560_02686 PF01202 Shikimate kinase SynA1560_02690 PF02033 Ribosome-binding factor A SynA1560_02691 PF01915 Glycosyl hydrolase family 3 C-terminal domain SynA1560_02691 PF00933 Glycosyl hydrolase family 3 N terminal domain SynA1560_02692 PF13181 Tetratricopeptide repeat SynA1560_02692 PF00535 Glycosyl transferase family 2 SynA1560_02693 PF02602 Uroporphyrinogen-III synthase HemD SynA1560_02696 PF01593 Flavin containing amine oxidoreductase SynA1560_02697 PF01521 Iron-sulphur cluster biosynthesis SynA1560_02700 PF01370 NAD dependent epimerase/dehydratase family SynA1560_02700 PF08338 Domain of unknown function (DUF1731) SynA1560_02701 PF02080 TrkA-C domain SynA1560_02701 PF00999 Sodium/hydrogen exchanger family SynA1560_02701 PF03471 Transporter associated domain SynA1560_02702 PF11910 Cyanobacterial and plant NDH-1 subunit O SynA1560_02704 PF01556 DnaJ C terminal domain SynA1560_02704 PF00684 DnaJ central domain SynA1560_02704 PF00226 DnaJ domain SynA1560_02705 PF00291 Pyridoxal-phosphate dependent enzyme SynA1560_02707 PF04966 Carbohydrate-selective porin, OprB family SynA1560_02707 PF00395 S-layer homology domain SynA1560_02710 PF00535 Glycosyl transferase family 2 SynA1560_02714 PF00124 Photosynthetic reaction centre protein SynA1560_02716 PF00005 ABC transporter SynA1560_02719 PF00486 Transcriptional regulatory protein, C terminal SynA1560_02719 PF00072 Response regulator receiver domain SynA1560_02720 PF09115 DNA polymerase III, delta subunit, C terminal SynA1560_02721 PF02223 Thymidylate kinase SynA1560_02722 PF00403 Heavy-metal-associated domain SynA1560_02724 PF18073 Rubredoxin metal binding domain SynA1560_02724 PF06745 KaiC SynA1560_02725 PF00072 Response regulator receiver domain SynA1560_02725 PF00486 Transcriptional regulatory protein, C terminal SynA1560_02726 PF02504 Fatty acid synthesis protein SynA1560_02727 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SynA1560_02727 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SynA1560_02728 PF00698 Acyl transferase domain SynA1560_02731 PF00814 Glycoprotease family SynA1560_02733 PF01743 Poly A polymerase head domain SynA1560_02733 PF13735 tRNA nucleotidyltransferase domain 2 putative SynA1560_02733 PF12627 Probable RNA and SrmB- binding site of polymerase A SynA1560_02739 PF00005 ABC transporter SynA1560_02741 PF07690 Major Facilitator Superfamily SynA1560_02743 PF00355 Rieske [2Fe-2S] domain SynA1560_02745 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain SynA1560_02748 PF00486 Transcriptional regulatory protein, C terminal SynA1560_02748 PF00072 Response regulator receiver domain SynA1560_02749 PF00990 Diguanylate cyclase, GGDEF domain SynA1560_02749 PF00072 Response regulator receiver domain SynA1560_02750 PF01627 Hpt domain SynA1560_02750 PF00072 Response regulator receiver domain SynA1560_02750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SynA1560_02750 PF00512 His Kinase A (phospho-acceptor) domain SynA1560_02751 PF01593 Flavin containing amine oxidoreductase SynA1560_02752 PF10664 Cyanobacterial and plastid NDH-1 subunit M SynA1560_02754 PF03466 LysR substrate binding domain SynA1560_02754 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SynA1560_02756 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus SynA1560_02756 PF00361 Proton-conducting membrane transporter SynA1560_02756 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus SynA1560_02758 PF00361 Proton-conducting membrane transporter SynA1560_02761 PF00483 Nucleotidyl transferase SynA1560_02763 PF00072 Response regulator receiver domain SynA1560_02763 PF00196 Bacterial regulatory proteins, luxR family SynA1560_02766 PF01513 ATP-NAD kinase SynA1560_02767 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L SynA1560_02768 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 SynA1560_02769 PF13237 4Fe-4S dicluster domain SynA1560_02770 PF00146 NADH dehydrogenase SynA1560_02771 PF00285 Citrate synthase, C-terminal domain SynA1560_02772 PF00300 Histidine phosphatase superfamily (branch 1) SynA1560_02775 PF01628 HrcA protein C terminal domain SynA1560_02777 PF00291 Pyridoxal-phosphate dependent enzyme SynA1560_02778 PF13649 Methyltransferase domain SynA1560_02779 PF01253 Translation initiation factor SUI1 SynA1560_02781 PF01594 AI-2E family transporter SynA1560_02783 PF00731 AIR carboxylase SynA1560_02785 PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus SynA1560_02786 PF00849 RNA pseudouridylate synthase SynA1560_02787 PF00486 Transcriptional regulatory protein, C terminal SynA1560_02787 PF00072 Response regulator receiver domain SynA1560_02789 PF00266 Aminotransferase class-V SynA1560_02792 PF01795 MraW methylase family SynA1560_02793 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit SynA1560_02800 PF01040 UbiA prenyltransferase family SynA1560_02802 PF00326 Prolyl oligopeptidase family SynA1560_02803 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain SynA1560_02803 PF02951 Prokaryotic glutathione synthetase, N-terminal domain SynA1560_02804 PF00462 Glutaredoxin SynA1560_02806 PF00472 RF-1 domain SynA1560_02806 PF03462 PCRF domain SynA1560_02808 PF02130 Uncharacterized protein family UPF0054 SynA1560_02809 PF01219 Prokaryotic diacylglycerol kinase SynA1560_02810 PF00117 Glutamine amidotransferase class-I SynA1560_02812 PF00155 Aminotransferase class I and II SynA1560_02814 PF02696 Uncharacterized ACR, YdiU/UPF0061 family SynA1560_02823 PF17763 Glutaminase/Asparaginase C-terminal domain SynA1560_02823 PF00710 Asparaginase, N-terminal SynA1560_02825 PF05746 DALR anticodon binding domain SynA1560_02825 PF00750 tRNA synthetases class I (R) SynA1560_02825 PF03485 Arginyl tRNA synthetase N terminal domain SynA1560_02830 PF00421 Photosystem II protein SynA1560_02832 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain SynA1560_02832 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain SynA1560_02834 PF01926 50S ribosome-binding GTPase SynA1560_02834 PF10396 GTP-binding protein TrmE N-terminus SynA1560_02834 PF12631 MnmE helical domain SynA1560_02836 PF13291 ACT domain SynA1560_02836 PF02824 TGS domain SynA1560_02836 PF04607 Region found in RelA / SpoT proteins SynA1560_02837 PF00005 ABC transporter SynA1560_02837 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SynA1560_02840 PF01479 S4 domain SynA1560_02840 PF00849 RNA pseudouridylate synthase SynA1560_02841 PF01926 50S ribosome-binding GTPase SynA1560_02842 PF00582 Universal stress protein family SynA1560_02843 PF00162 Phosphoglycerate kinase SynA1560_02846 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase SynA1560_02846 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SynA1560_02848 PF04101 Glycosyltransferase family 28 C-terminal domain SynA1560_02848 PF03033 Glycosyltransferase family 28 N-terminal domain SynA1560_02849 PF00155 Aminotransferase class I and II SynA1560_02851 PF00263 Bacterial type II and III secretion system protein SynA1560_02851 PF03958 Bacterial type II/III secretion system short domain SynA1560_02855 PF01180 Dihydroorotate dehydrogenase SynA1560_02856 PF00075 RNase H SynA1560_02858 PF00542 Ribosomal protein L7/L12 C-terminal domain SynA1560_02858 PF16320 Ribosomal protein L7/L12 dimerisation domain SynA1560_02859 PF00466 Ribosomal protein L10 SynA1560_02860 PF00687 Ribosomal protein L1p/L10e family SynA1560_02861 PF03946 Ribosomal protein L11, N-terminal domain SynA1560_02861 PF00298 Ribosomal protein L11, RNA binding domain SynA1560_02862 PF02357 Transcription termination factor nusG SynA1560_02862 PF00467 KOW motif SynA1560_02863 PF00584 SecE/Sec61-gamma subunits of protein translocation complex SynA1560_02864 PF02861 Clp amino terminal domain, pathogenicity island component SynA1560_02864 PF17871 AAA lid domain SynA1560_02864 PF10431 C-terminal, D2-small domain, of ClpB protein SynA1560_02864 PF07724 AAA domain (Cdc48 subfamily) SynA1560_02864 PF00004 ATPase family associated with various cellular activities (AAA) SynA1560_02865 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SynA1560_02867 PF00113 Enolase, C-terminal TIM barrel domain SynA1560_02867 PF03952 Enolase, N-terminal domain SynA1560_02868 PF03109 ABC1 family SynA1560_02871 PF01960 ArgJ family SynA1560_02872 PF01121 Dephospho-CoA kinase SynA1560_02875 PF02934 GatB/GatE catalytic domain SynA1560_02875 PF02637 GatB domain SynA1560_02876 PF03458 UPF0126 domain SynA1560_02877 PF05690 Thiazole biosynthesis protein ThiG SynA1560_02877 PF01266 FAD dependent oxidoreductase SynA1560_02878 PF00334 Nucleoside diphosphate kinase SynA1560_02879 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SynA1560_02879 PF17810 Arginine decarboxylase helical bundle domain SynA1560_02879 PF17944 Arginine decarboxylase C-terminal helical extension SynA1560_02883 PF00211 Adenylate and Guanylate cyclase catalytic domain SynA1560_02887 PF02142 MGS-like domain SynA1560_02888 PF00365 Phosphofructokinase SynA1560_02894 PF00664 ABC transporter transmembrane region SynA1560_02894 PF00005 ABC transporter SynA1560_02894 PF03412 Peptidase C39 family SynA1560_02896 PF00005 ABC transporter SynA1560_02896 PF03412 Peptidase C39 family SynA1560_02896 PF00664 ABC transporter transmembrane region SynA1560_02897 PF00211 Adenylate and Guanylate cyclase catalytic domain SynA1560_02900 PF00924 Mechanosensitive ion channel SynA1560_02904 PF02272 DHHA1 domain SynA1560_02904 PF01411 tRNA synthetases class II (A) SynA1560_02904 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SynA1560_02906 PF00176 SNF2 family N-terminal domain SynA1560_02906 PF00271 Helicase conserved C-terminal domain SynA1560_02906 PF12419 SNF2 Helicase protein SynA1560_02911 PF00753 Metallo-beta-lactamase superfamily SynA1560_02911 PF01613 Flavin reductase like domain SynA1560_02912 PF00258 Flavodoxin SynA1560_02912 PF01613 Flavin reductase like domain SynA1560_02913 PF01613 Flavin reductase like domain SynA1560_02913 PF00301 Rubredoxin SynA1560_02915 PF17954 Quercetinase C-terminal cupin domain SynA1560_02915 PF02678 Pirin SynA1560_02918 PF02347 Glycine cleavage system P-protein SynA1560_02919 PF01597 Glycine cleavage H-protein SynA1560_02920 PF06838 Methionine gamma-lyase SynA1560_02924 PF01281 Ribosomal protein L9, N-terminal domain SynA1560_02924 PF03948 Ribosomal protein L9, C-terminal domain SynA1560_02925 PF14528 LAGLIDADG-like domain SynA1560_02925 PF03796 DnaB-like helicase C terminal domain SynA1560_02925 PF00772 DnaB-like helicase N terminal domain SynA1560_02925 PF14528 LAGLIDADG-like domain SynA1560_02925 PF03796 DnaB-like helicase C terminal domain SynA1560_02925 PF00772 DnaB-like helicase N terminal domain SynA1560_02932 PF13932 GidA associated domain SynA1560_02932 PF01134 Glucose inhibited division protein A SynA1560_02940 PF01653 NAD-dependent DNA ligase adenylation domain SynA1560_02940 PF03120 NAD-dependent DNA ligase OB-fold domain SynA1560_02940 PF00533 BRCA1 C Terminus (BRCT) domain SynA1560_02940 PF12826 Helix-hairpin-helix motif SynA1560_02940 PF03119 NAD-dependent DNA ligase C4 zinc finger domain SynA1560_02943 PF09335 SNARE associated Golgi protein SynA1560_02947 PF00924 Mechanosensitive ion channel SynA1560_02950 PF00005 ABC transporter SynA1560_02951 PF00133 tRNA synthetases class I (I, L, M and V) SynA1560_02951 PF08264 Anticodon-binding domain of tRNA SynA1560_02951 PF10458 Valyl tRNA synthetase tRNA binding arm SynA1560_02953 PF12794 Mechanosensitive ion channel inner membrane domain 1 SynA1560_02953 PF00924 Mechanosensitive ion channel SynA1560_02953 PF12795 Mechanosensitive ion channel porin domain SynA1560_02966 PF07862 Nif11 domain SynA1560_02981 PF03819 MazG nucleotide pyrophosphohydrolase domain SynA1560_02984 PF03462 PCRF domain SynA1560_02984 PF00472 RF-1 domain SynA1560_02986 PF17284 Spermidine synthase tetramerisation domain SynA1560_02987 PF00491 Arginase family SynA1560_02991 PF01571 Aminomethyltransferase folate-binding domain SynA1560_02991 PF08669 Glycine cleavage T-protein C-terminal barrel domain SynA1560_02992 PF07228 Stage II sporulation protein E (SpoIIE) SynA1560_02992 PF00672 HAMP domain SynA1560_02993 PF01833 IPT/TIG domain SynA1560_02993 PF02806 Alpha amylase, C-terminal all-beta domain SynA1560_02993 PF00128 Alpha amylase, catalytic domain SynA1560_02993 PF00686 Starch binding domain SynA1560_02998 PF00128 Alpha amylase, catalytic domain SynA1560_02998 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SynA1560_03001 PF00672 HAMP domain SynA1560_03001 PF07228 Stage II sporulation protein E (SpoIIE) SynA1560_03003 PF01336 OB-fold nucleic acid binding domain SynA1560_03003 PF02938 GAD domain SynA1560_03003 PF00152 tRNA synthetases class II (D, K and N) SynA1560_03004 PF04539 Sigma-70 region 3 SynA1560_03004 PF04545 Sigma-70, region 4 SynA1560_03004 PF04542 Sigma-70 region 2 SynA1560_03004 PF00140 Sigma-70 factor, region 1.2 SynA1560_03005 PF00210 Ferritin-like domain SynA1560_03006 PF00117 Glutamine amidotransferase class-I SynA1560_03006 PF06418 CTP synthase N-terminus SynA1560_03007 PF04055 Radical SAM superfamily SynA1560_03008 PF01551 Peptidase family M23 SynA1560_03009 PF00639 PPIC-type PPIASE domain SynA1560_03009 PF09312 SurA N-terminal domain SynA1560_03010 PF03412 Peptidase C39 family SynA1560_03010 PF00664 ABC transporter transmembrane region SynA1560_03010 PF00005 ABC transporter SynA1560_03012 PF03974 Ecotin SynA1560_03013 PF06508 Queuosine biosynthesis protein QueC SynA1560_03014 PF00425 chorismate binding enzyme SynA1560_03014 PF04715 Anthranilate synthase component I, N terminal region SynA1560_03018 PF00128 Alpha amylase, catalytic domain SynA1560_03021 PF00005 ABC transporter SynA1560_03022 PF00005 ABC transporter SynA1560_03022 PF12399 Branched-chain amino acid ATP-binding cassette transporter SynA1560_03024 PF02653 Branched-chain amino acid transport system / permease component SynA1560_03025 PF13458 Periplasmic binding protein SynA1560_03026 PF02492 CobW/HypB/UreG, nucleotide-binding domain SynA1560_03027 PF01730 UreF SynA1560_03028 PF05194 UreE urease accessory protein, C-terminal domain SynA1560_03028 PF02814 UreE urease accessory protein, N-terminal domain SynA1560_03030 PF01774 UreD urease accessory protein SynA1560_03031 PF00547 Urease, gamma subunit SynA1560_03032 PF00699 Urease beta subunit SynA1560_03033 PF00449 Urease alpha-subunit, N-terminal domain SynA1560_03033 PF01979 Amidohydrolase family SynA1560_03034 PF00117 Glutamine amidotransferase class-I SynA1560_03038 PF01546 Peptidase family M20/M25/M40 SynA1560_03038 PF07687 Peptidase dimerisation domain SynA1560_03039 PF13537 Glutamine amidotransferase domain SynA1560_03039 PF00733 Asparagine synthase SynA1560_03040 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SynA1560_03040 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SynA1560_03042 PF00474 Sodium:solute symporter family SynA1560_03044 PF14403 Circularly permuted ATP-grasp type 2 SynA1560_03048 PF06463 Molybdenum Cofactor Synthesis C SynA1560_03048 PF04055 Radical SAM superfamily SynA1560_03050 PF06463 Molybdenum Cofactor Synthesis C SynA1560_03050 PF04055 Radical SAM superfamily SynA1560_03051 PF04055 Radical SAM superfamily SynA1560_03051 PF06463 Molybdenum Cofactor Synthesis C SynA1560_03052 PF12804 MobA-like NTP transferase domain SynA1560_03053 PF07690 Major Facilitator Superfamily SynA1560_03054 PF07690 Major Facilitator Superfamily SynA1560_03055 PF01568 Molydopterin dinucleotide binding domain SynA1560_03055 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SynA1560_03055 PF00384 Molybdopterin oxidoreductase SynA1560_03060 PF01967 MoaC family SynA1560_03061 PF03454 MoeA C-terminal region (domain IV) SynA1560_03061 PF03453 MoeA N-terminal region (domain I and II) SynA1560_03061 PF00994 Probable molybdopterin binding domain SynA1560_03064 PF02391 MoaE protein SynA1560_03066 PF00994 Probable molybdopterin binding domain SynA1560_03067 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SynA1560_03069 PF01077 Nitrite and sulphite reductase 4Fe-4S domain SynA1560_03069 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain SynA1560_03071 PF01226 Formate/nitrite transporter SynA1560_03073 PF02560 Cyanate lyase C-terminal domain SynA1560_03075 PF02885 Glycosyl transferase family, helical bundle domain SynA1560_03075 PF00591 Glycosyl transferase family, a/b domain SynA1560_03077 PF07690 Major Facilitator Superfamily SynA1560_03078 PF02503 Polyphosphate kinase middle domain SynA1560_03078 PF13090 Polyphosphate kinase C-terminal domain 2 SynA1560_03078 PF17941 Polyphosphate kinase C-terminal domain 1 SynA1560_03078 PF13089 Polyphosphate kinase N-terminal domain SynA1560_03079 PF00140 Sigma-70 factor, region 1.2 SynA1560_03079 PF04542 Sigma-70 region 2 SynA1560_03079 PF04545 Sigma-70, region 4 SynA1560_03079 PF04539 Sigma-70 region 3 SynA1560_03082 PF00793 DAHP synthetase I family SynA1560_03083 PF00330 Aconitase family (aconitate hydratase) SynA1560_03083 PF11791 Aconitate B N-terminal domain SynA1560_03083 PF06434 Aconitate hydratase 2 N-terminus SynA1560_03084 PF00654 Voltage gated chloride channel SynA1560_03086 PF01842 ACT domain SynA1560_03086 PF00551 Formyl transferase SynA1560_03089 PF01266 FAD dependent oxidoreductase SynA1560_03090 PF12849 PBP superfamily domain SynA1560_03091 PF00012 Hsp70 protein SynA1560_03092 PF01488 Shikimate / quinate 5-dehydrogenase SynA1560_03092 PF08501 Shikimate dehydrogenase substrate binding domain SynA1560_03092 PF18317 Shikimate 5'-dehydrogenase C-terminal domain SynA1560_03093 PF16166 Chloroplast import apparatus Tic20-like SynA1560_03094 PF01250 Ribosomal protein S6 SynA1560_03096 PF00764 Arginosuccinate synthase SynA1560_03099 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 SynA1560_03099 PF00953 Glycosyl transferase family 4 SynA1560_03103 PF02222 ATP-grasp domain SynA1560_03104 PF00534 Glycosyl transferases group 1 SynA1560_03104 PF00862 Sucrose synthase SynA1560_03106 PF17760 UvrA interaction domain SynA1560_03106 PF17755 UvrA DNA-binding domain SynA1560_03107 PF02463 RecF/RecN/SMC N terminal domain SynA1560_03108 PF03109 ABC1 family SynA1560_03110 PF00291 Pyridoxal-phosphate dependent enzyme SynA1560_50002 PF05151 Photosystem II reaction centre M protein (PsbM) SynA1560_50007 PF00999 Sodium/hydrogen exchanger family SynA1560_50007 PF02080 TrkA-C domain SynA1560_50007 PF03471 Transporter associated domain