locus-tag class description SynA1562_00001 PF00712 DNA polymerase III beta subunit, N-terminal domain SynA1562_00001 PF02767 DNA polymerase III beta subunit, central domain SynA1562_00001 PF02768 DNA polymerase III beta subunit, C-terminal domain SynA1562_00003 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain SynA1562_00003 PF00586 AIR synthase related protein, N-terminal domain SynA1562_00003 PF02769 AIR synthase related protein, C-terminal domain SynA1562_00004 PF00156 Phosphoribosyl transferase domain SynA1562_00005 PF00521 DNA gyrase/topoisomerase IV, subunit A SynA1562_00005 PF03989 DNA gyrase C-terminal domain, beta-propeller SynA1562_00007 PF08331 Domain of unknown function (DUF1730) SynA1562_00010 PF01029 NusB family SynA1562_00011 PF02881 SRP54-type protein, helical bundle domain SynA1562_00011 PF00448 SRP54-type protein, GTPase domain SynA1562_00012 PF07228 Stage II sporulation protein E (SpoIIE) SynA1562_00012 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain SynA1562_00013 PF14698 Argininosuccinate lyase C-terminal SynA1562_00013 PF00206 Lyase SynA1562_00014 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) SynA1562_00015 PF01207 Dihydrouridine synthase (Dus) SynA1562_00016 PF01641 SelR domain SynA1562_00018 PF00482 Type II secretion system (T2SS), protein F SynA1562_00019 PF00437 Type II/IV secretion system protein SynA1562_00020 PF00437 Type II/IV secretion system protein SynA1562_00020 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain SynA1562_00021 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain SynA1562_00021 PF00437 Type II/IV secretion system protein SynA1562_00022 PF01025 GrpE SynA1562_00023 PF00226 DnaJ domain SynA1562_00023 PF01556 DnaJ C terminal domain SynA1562_00023 PF00684 DnaJ central domain SynA1562_00025 PF03193 RsgA GTPase SynA1562_00026 PF02575 YbaB/EbfC DNA-binding family SynA1562_00027 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain SynA1562_00027 PF01565 FAD binding domain SynA1562_00028 PF08245 Mur ligase middle domain SynA1562_00028 PF02875 Mur ligase family, glutamate ligase domain SynA1562_00028 PF01225 Mur ligase family, catalytic domain SynA1562_00030 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SynA1562_00030 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SynA1562_00031 PF02769 AIR synthase related protein, C-terminal domain SynA1562_00031 PF00586 AIR synthase related protein, N-terminal domain SynA1562_00032 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SynA1562_00033 PF09285 Elongation factor P, C-terminal SynA1562_00033 PF08207 Elongation factor P (EF-P) KOW-like domain SynA1562_00033 PF01132 Elongation factor P (EF-P) OB domain SynA1562_00034 PF00364 Biotin-requiring enzyme SynA1562_00035 PF04166 Pyridoxal phosphate biosynthetic protein PdxA SynA1562_00041 PF00271 Helicase conserved C-terminal domain SynA1562_00041 PF04434 SWIM zinc finger SynA1562_00041 PF00176 SNF2 family N-terminal domain SynA1562_00049 PF00266 Aminotransferase class-V SynA1562_00051 PF01888 CbiD SynA1562_00052 PF00117 Glutamine amidotransferase class-I SynA1562_00052 PF00958 GMP synthase C terminal domain SynA1562_00057 PF00905 Penicillin binding protein transpeptidase domain SynA1562_00057 PF03717 Penicillin-binding Protein dimerisation domain SynA1562_00058 PF00534 Glycosyl transferases group 1 SynA1562_00058 PF13439 Glycosyltransferase Family 4 SynA1562_00059 PF16363 GDP-mannose 4,6 dehydratase SynA1562_00061 PF05690 Thiazole biosynthesis protein ThiG SynA1562_00064 PF00453 Ribosomal protein L20 SynA1562_00065 PF01632 Ribosomal protein L35 SynA1562_00066 PF08486 Stage II sporulation protein SynA1562_00068 PF12169 DNA polymerase III subunits gamma and tau domain III SynA1562_00070 PF10431 C-terminal, D2-small domain, of ClpB protein SynA1562_00070 PF07724 AAA domain (Cdc48 subfamily) SynA1562_00070 PF06689 ClpX C4-type zinc finger SynA1562_00071 PF00574 Clp protease SynA1562_00072 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SynA1562_00072 PF05698 Bacterial trigger factor protein (TF) C-terminus SynA1562_00072 PF05697 Bacterial trigger factor protein (TF) SynA1562_00073 PF01118 Semialdehyde dehydrogenase, NAD binding domain SynA1562_00073 PF02774 Semialdehyde dehydrogenase, dimerisation domain SynA1562_00074 PF00701 Dihydrodipicolinate synthetase family SynA1562_00075 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain SynA1562_00075 PF17770 Ribonuclease J C-terminal domain SynA1562_00075 PF00753 Metallo-beta-lactamase superfamily SynA1562_00078 PF13840 ACT domain SynA1562_00078 PF00696 Amino acid kinase family SynA1562_00080 PF02570 Precorrin-8X methylmutase SynA1562_00081 PF01171 PP-loop family SynA1562_00081 PF09179 TilS substrate binding domain SynA1562_00083 PF01737 YCF9 SynA1562_00084 PF00885 6,7-dimethyl-8-ribityllumazine synthase SynA1562_00085 PF00488 MutS domain V SynA1562_00085 PF05190 MutS family domain IV SynA1562_00085 PF05192 MutS domain III SynA1562_00085 PF01624 MutS domain I SynA1562_00085 PF05188 MutS domain II SynA1562_00087 PF12344 Ultra-violet resistance protein B SynA1562_00087 PF02151 UvrB/uvrC motif SynA1562_00087 PF17757 UvrB interaction domain SynA1562_00087 PF04851 Type III restriction enzyme, res subunit SynA1562_00087 PF00271 Helicase conserved C-terminal domain SynA1562_00089 PF07517 SecA DEAD-like domain SynA1562_00089 PF01043 SecA preprotein cross-linking domain SynA1562_00089 PF07516 SecA Wing and Scaffold domain SynA1562_00090 PF00132 Bacterial transferase hexapeptide (six repeats) SynA1562_00090 PF06426 Serine acetyltransferase, N-terminal SynA1562_00091 PF00392 Bacterial regulatory proteins, gntR family SynA1562_00093 PF00707 Translation initiation factor IF-3, C-terminal domain SynA1562_00093 PF05198 Translation initiation factor IF-3, N-terminal domain SynA1562_00095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SynA1562_00095 PF01751 Toprim domain SynA1562_00095 PF00204 DNA gyrase B SynA1562_00095 PF00986 DNA gyrase B subunit, carboxyl terminus SynA1562_00097 PF02537 CrcB-like protein, Camphor Resistance (CrcB) SynA1562_00098 PF02537 CrcB-like protein, Camphor Resistance (CrcB) SynA1562_00099 PF00255 Glutathione peroxidase SynA1562_00100 PF01769 Divalent cation transporter SynA1562_00100 PF00571 CBS domain SynA1562_00100 PF03448 MgtE intracellular N domain SynA1562_00101 PF00140 Sigma-70 factor, region 1.2 SynA1562_00101 PF04542 Sigma-70 region 2 SynA1562_00101 PF04539 Sigma-70 region 3 SynA1562_00101 PF04545 Sigma-70, region 4 SynA1562_00102 PF00561 alpha/beta hydrolase fold SynA1562_00103 PF14815 NUDIX domain SynA1562_00103 PF00730 HhH-GPD superfamily base excision DNA repair protein SynA1562_00103 PF00633 Helix-hairpin-helix motif SynA1562_00103 PF10576 Iron-sulfur binding domain of endonuclease III SynA1562_00104 PF00294 pfkB family carbohydrate kinase SynA1562_00105 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE SynA1562_00106 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain SynA1562_00106 PF05221 S-adenosyl-L-homocysteine hydrolase SynA1562_00107 PF09335 SNARE associated Golgi protein SynA1562_00108 PF00436 Single-strand binding protein family SynA1562_00110 PF04085 rod shape-determining protein MreC SynA1562_00113 PF00486 Transcriptional regulatory protein, C terminal SynA1562_00113 PF00072 Response regulator receiver domain SynA1562_00114 PF01336 OB-fold nucleic acid binding domain SynA1562_00114 PF00152 tRNA synthetases class II (D, K and N) SynA1562_00118 PF10017 Histidine-specific methyltransferase, SAM-dependent SynA1562_00121 PF01668 SmpB protein SynA1562_00122 PF05496 Holliday junction DNA helicase RuvB P-loop domain SynA1562_00122 PF05491 RuvB C-terminal winged helix domain SynA1562_00122 PF17864 RuvB AAA lid domain SynA1562_00124 PF07687 Peptidase dimerisation domain SynA1562_00124 PF01546 Peptidase family M20/M25/M40 SynA1562_00127 PF01964 Radical SAM ThiC family SynA1562_00128 PF02780 Transketolase, C-terminal domain SynA1562_00128 PF02779 Transketolase, pyrimidine binding domain SynA1562_00128 PF00456 Transketolase, thiamine diphosphate binding domain SynA1562_00129 PF02801 Beta-ketoacyl synthase, C-terminal domain SynA1562_00129 PF00109 Beta-ketoacyl synthase, N-terminal domain SynA1562_00130 PF00550 Phosphopantetheine attachment site SynA1562_00131 PF12838 4Fe-4S dicluster domain SynA1562_00132 PF01380 SIS domain SynA1562_00133 PF01050 Mannose-6-phosphate isomerase SynA1562_00133 PF00483 Nucleotidyl transferase SynA1562_00140 PF00535 Glycosyl transferase family 2 SynA1562_00144 PF16363 GDP-mannose 4,6 dehydratase SynA1562_00145 PF01370 NAD dependent epimerase/dehydratase family SynA1562_00146 PF16363 GDP-mannose 4,6 dehydratase SynA1562_00147 PF00483 Nucleotidyl transferase SynA1562_00147 PF01050 Mannose-6-phosphate isomerase SynA1562_00154 PF00535 Glycosyl transferase family 2 SynA1562_00156 PF16363 GDP-mannose 4,6 dehydratase SynA1562_00157 PF16363 GDP-mannose 4,6 dehydratase SynA1562_00158 PF00483 Nucleotidyl transferase SynA1562_00158 PF01050 Mannose-6-phosphate isomerase SynA1562_00159 PF01782 RimM N-terminal domain SynA1562_00159 PF05239 PRC-barrel domain SynA1562_00161 PF00027 Cyclic nucleotide-binding domain SynA1562_00161 PF00520 Ion transport protein SynA1562_00162 PF00035 Double-stranded RNA binding motif SynA1562_00162 PF14622 Ribonuclease-III-like SynA1562_00166 PF00343 Carbohydrate phosphorylase SynA1562_00167 PF00999 Sodium/hydrogen exchanger family SynA1562_00169 PF12697 Alpha/beta hydrolase family SynA1562_00171 PF01565 FAD binding domain SynA1562_00173 PF02754 Cysteine-rich domain SynA1562_00173 PF13183 4Fe-4S dicluster domain SynA1562_00174 PF00180 Isocitrate/isopropylmalate dehydrogenase SynA1562_00175 PF00535 Glycosyl transferase family 2 SynA1562_00177 PF01048 Phosphorylase superfamily SynA1562_00179 PF01126 Heme oxygenase SynA1562_00181 PF00664 ABC transporter transmembrane region SynA1562_00181 PF00005 ABC transporter SynA1562_00185 PF00534 Glycosyl transferases group 1 SynA1562_00186 PF00534 Glycosyl transferases group 1 SynA1562_00186 PF13439 Glycosyltransferase Family 4 SynA1562_00187 PF00534 Glycosyl transferases group 1 SynA1562_00187 PF13439 Glycosyltransferase Family 4 SynA1562_00190 PF00793 DAHP synthetase I family SynA1562_00195 PF00580 UvrD/REP helicase N-terminal domain SynA1562_00195 PF13361 UvrD-like helicase C-terminal domain SynA1562_00197 PF02348 Cytidylyltransferase SynA1562_00199 PF01380 SIS domain SynA1562_00199 PF00571 CBS domain SynA1562_00200 PF01743 Poly A polymerase head domain SynA1562_00201 PF00586 AIR synthase related protein, N-terminal domain SynA1562_00201 PF02769 AIR synthase related protein, C-terminal domain SynA1562_00202 PF16363 GDP-mannose 4,6 dehydratase SynA1562_00203 PF13393 Histidyl-tRNA synthetase SynA1562_00203 PF03129 Anticodon binding domain SynA1562_00204 PF16363 GDP-mannose 4,6 dehydratase SynA1562_00205 PF01370 NAD dependent epimerase/dehydratase family SynA1562_00206 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain SynA1562_00206 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain SynA1562_00206 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain SynA1562_00207 PF01370 NAD dependent epimerase/dehydratase family SynA1562_00211 PF00534 Glycosyl transferases group 1 SynA1562_00211 PF00535 Glycosyl transferase family 2 SynA1562_00215 PF01788 PsbJ SynA1562_00216 PF02419 PsbL protein SynA1562_00217 PF00283 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits SynA1562_00218 PF00284 Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit SynA1562_00218 PF00283 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits SynA1562_00219 PF14870 Photosynthesis system II assembly factor YCF48 SynA1562_00220 PF00301 Rubredoxin SynA1562_00221 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 SynA1562_00222 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit SynA1562_00223 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit SynA1562_00224 PF01933 Uncharacterised protein family UPF0052 SynA1562_00225 PF00005 ABC transporter SynA1562_00225 PF12857 TOBE-like domain SynA1562_00227 PF01078 Magnesium chelatase, subunit ChlI SynA1562_00227 PF13519 von Willebrand factor type A domain SynA1562_00227 PF17863 AAA lid domain SynA1562_00229 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) SynA1562_00230 PF00293 NUDIX domain SynA1562_00231 PF03441 FAD binding domain of DNA photolyase SynA1562_00231 PF00875 DNA photolyase SynA1562_00232 PF00482 Type II secretion system (T2SS), protein F SynA1562_00233 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SynA1562_00239 PF00475 Imidazoleglycerol-phosphate dehydratase SynA1562_00240 PF03055 Retinal pigment epithelial membrane protein SynA1562_00242 PF02028 BCCT, betaine/carnitine/choline family transporter SynA1562_00243 PF00890 FAD binding domain SynA1562_00246 PF01725 Ham1 family SynA1562_00247 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SynA1562_00247 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SynA1562_00247 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SynA1562_00247 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SynA1562_00249 PF01571 Aminomethyltransferase folate-binding domain SynA1562_00253 PF01595 Cyclin M transmembrane N-terminal domain SynA1562_00253 PF00571 CBS domain SynA1562_00253 PF03471 Transporter associated domain SynA1562_00254 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SynA1562_00254 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SynA1562_00256 PF03808 Glycosyl transferase WecB/TagA/CpsF family SynA1562_00257 PF02533 Photosystem II 4 kDa reaction centre component SynA1562_00258 PF01702 Queuine tRNA-ribosyltransferase SynA1562_00260 PF02654 Cobalamin-5-phosphate synthase SynA1562_00261 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SynA1562_00261 PF00512 His Kinase A (phospho-acceptor) domain SynA1562_00266 PF02142 MGS-like domain SynA1562_00266 PF01808 AICARFT/IMPCHase bienzyme SynA1562_00269 PF02401 LytB protein SynA1562_00270 PF00909 Ammonium Transporter Family SynA1562_00271 PF03749 Sugar fermentation stimulation protein RE domain SynA1562_00271 PF17746 SfsA N-terminal OB domain SynA1562_00272 PF03023 Lipid II flippase MurJ SynA1562_00277 PF00464 Serine hydroxymethyltransferase SynA1562_00279 PF00953 Glycosyl transferase family 4 SynA1562_00280 PF02464 Competence-damaged protein SynA1562_00280 PF00994 Probable molybdopterin binding domain SynA1562_00280 PF18146 Damage-inducible protein CinA KH domain SynA1562_00281 PF00330 Aconitase family (aconitate hydratase) SynA1562_00282 PF00694 Aconitase C-terminal domain SynA1562_00285 PF02532 Photosystem II reaction centre I protein (PSII 4.8 kDa protein) SynA1562_00287 PF02468 Photosystem II reaction centre N protein (psbN) SynA1562_00288 PF00737 Photosystem II 10 kDa phosphoprotein SynA1562_00289 PF02416 mttA/Hcf106 family SynA1562_00290 PF01195 Peptidyl-tRNA hydrolase SynA1562_00293 PF11283 Protein of unknown function (DUF3084) SynA1562_00294 PF00027 Cyclic nucleotide-binding domain SynA1562_00294 PF13545 Crp-like helix-turn-helix domain SynA1562_00295 PF03725 3' exoribonuclease family, domain 2 SynA1562_00295 PF01138 3' exoribonuclease family, domain 1 SynA1562_00297 PF00692 dUTPase SynA1562_00299 PF00085 Thioredoxin SynA1562_00301 PF01464 Transglycosylase SLT domain SynA1562_00302 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SynA1562_00302 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SynA1562_00302 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SynA1562_00302 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SynA1562_00305 PF02390 Putative methyltransferase SynA1562_00309 PF08264 Anticodon-binding domain of tRNA SynA1562_00309 PF00133 tRNA synthetases class I (I, L, M and V) SynA1562_00309 PF06827 Zinc finger found in FPG and IleRS SynA1562_00313 PF02686 Glu-tRNAGln amidotransferase C subunit SynA1562_00314 PF02633 Creatinine amidohydrolase SynA1562_00316 PF02592 Putative vitamin uptake transporter SynA1562_00317 PF02245 Methylpurine-DNA glycosylase (MPG) SynA1562_00323 PF02245 Methylpurine-DNA glycosylase (MPG) SynA1562_00324 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SynA1562_00324 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SynA1562_00325 PF07992 Pyridine nucleotide-disulphide oxidoreductase SynA1562_00330 PF10742 Protein of unknown function (DUF2555) SynA1562_00331 PF04127 DNA / pantothenate metabolism flavoprotein SynA1562_00331 PF02441 Flavoprotein SynA1562_00333 PF01716 Manganese-stabilising protein / photosystem II polypeptide SynA1562_00334 PF01747 ATP-sulfurylase SynA1562_00334 PF14306 PUA-like domain SynA1562_00335 PF06480 FtsH Extracellular SynA1562_00335 PF00004 ATPase family associated with various cellular activities (AAA) SynA1562_00335 PF01434 Peptidase family M41 SynA1562_00335 PF17862 AAA+ lid domain SynA1562_00338 PF01264 Chorismate synthase SynA1562_00341 PF00124 Photosynthetic reaction centre protein SynA1562_00342 PF00919 Uncharacterized protein family UPF0004 SynA1562_00342 PF01938 TRAM domain SynA1562_00342 PF04055 Radical SAM superfamily SynA1562_00344 PF02617 ATP-dependent Clp protease adaptor protein ClpS SynA1562_00345 PF00155 Aminotransferase class I and II SynA1562_00347 PF10150 Ribonuclease E/G family SynA1562_00348 PF01351 Ribonuclease HII SynA1562_00350 PF00800 Prephenate dehydratase SynA1562_00350 PF01842 ACT domain SynA1562_00351 PF08241 Methyltransferase domain SynA1562_00352 PF02190 ATP-dependent protease La (LON) substrate-binding domain SynA1562_00352 PF00004 ATPase family associated with various cellular activities (AAA) SynA1562_00352 PF05362 Lon protease (S16) C-terminal proteolytic domain SynA1562_00353 PF00338 Ribosomal protein S10p/S20e SynA1562_00354 PF03143 Elongation factor Tu C-terminal domain SynA1562_00354 PF00009 Elongation factor Tu GTP binding domain SynA1562_00354 PF03144 Elongation factor Tu domain 2 SynA1562_00355 PF14492 Elongation Factor G, domain II SynA1562_00355 PF03764 Elongation factor G, domain IV SynA1562_00355 PF00009 Elongation factor Tu GTP binding domain SynA1562_00355 PF00679 Elongation factor G C-terminus SynA1562_00355 PF03144 Elongation factor Tu domain 2 SynA1562_00356 PF00177 Ribosomal protein S7p/S5e SynA1562_00357 PF00164 Ribosomal protein S12/S23 SynA1562_00358 PF01521 Iron-sulphur cluster biosynthesis SynA1562_00360 PF00310 Glutamine amidotransferases class-II SynA1562_00360 PF04898 Glutamate synthase central domain SynA1562_00360 PF01645 Conserved region in glutamate synthase SynA1562_00360 PF01493 GXGXG motif SynA1562_00362 PF04055 Radical SAM superfamily SynA1562_00364 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SynA1562_00364 PF01077 Nitrite and sulphite reductase 4Fe-4S domain SynA1562_00366 PF00223 Photosystem I psaA/psaB protein SynA1562_00367 PF00223 Photosystem I psaA/psaB protein SynA1562_00371 PF00873 AcrB/AcrD/AcrF family SynA1562_00372 PF02605 Photosystem I reaction centre subunit XI SynA1562_00373 PF00796 Photosystem I reaction centre subunit VIII SynA1562_00375 PF00535 Glycosyl transferase family 2 SynA1562_00379 PF01168 Alanine racemase, N-terminal domain SynA1562_00379 PF00842 Alanine racemase, C-terminal domain SynA1562_00381 PF00472 RF-1 domain SynA1562_00381 PF03462 PCRF domain SynA1562_00382 PF01197 Ribosomal protein L31 SynA1562_00383 PF00380 Ribosomal protein S9/S16 SynA1562_00384 PF00572 Ribosomal protein L13 SynA1562_00385 PF01416 tRNA pseudouridine synthase SynA1562_00387 PF01196 Ribosomal protein L17 SynA1562_00388 PF01000 RNA polymerase Rpb3/RpoA insert domain SynA1562_00388 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain SynA1562_00388 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain SynA1562_00389 PF00411 Ribosomal protein S11 SynA1562_00390 PF00416 Ribosomal protein S13/S18 SynA1562_00391 PF00444 Ribosomal protein L36 SynA1562_00393 PF00344 SecY translocase SynA1562_00394 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A SynA1562_00395 PF00333 Ribosomal protein S5, N-terminal domain SynA1562_00395 PF03719 Ribosomal protein S5, C-terminal domain SynA1562_00396 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast SynA1562_00397 PF00347 Ribosomal protein L6 SynA1562_00398 PF00410 Ribosomal protein S8 SynA1562_00399 PF00673 ribosomal L5P family C-terminus SynA1562_00399 PF00281 Ribosomal protein L5 SynA1562_00400 PF00467 KOW motif SynA1562_00400 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 SynA1562_00401 PF00238 Ribosomal protein L14p/L23e SynA1562_00402 PF00366 Ribosomal protein S17 SynA1562_00403 PF00831 Ribosomal L29 protein SynA1562_00404 PF00252 Ribosomal protein L16p/L10e SynA1562_00405 PF07650 KH domain SynA1562_00405 PF00189 Ribosomal protein S3, C-terminal domain SynA1562_00406 PF00237 Ribosomal protein L22p/L17e SynA1562_00407 PF00203 Ribosomal protein S19 SynA1562_00408 PF00181 Ribosomal Proteins L2, RNA binding domain SynA1562_00408 PF03947 Ribosomal Proteins L2, C-terminal domain SynA1562_00409 PF00276 Ribosomal protein L23 SynA1562_00410 PF00573 Ribosomal protein L4/L1 family SynA1562_00411 PF00297 Ribosomal protein L3 SynA1562_00412 PF11909 NADH-quinone oxidoreductase cyanobacterial subunit N SynA1562_00417 PF00154 recA bacterial DNA recombination protein SynA1562_00422 PF01593 Flavin containing amine oxidoreductase SynA1562_00423 PF03881 Fructosamine kinase SynA1562_00426 PF00899 ThiF family SynA1562_00426 PF00581 Rhodanese-like domain SynA1562_00427 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP SynA1562_00428 PF02540 NAD synthase SynA1562_00429 PF02675 S-adenosylmethionine decarboxylase SynA1562_00433 PF00311 Phosphoenolpyruvate carboxylase SynA1562_00434 PF04107 Glutamate-cysteine ligase family 2(GCS2) SynA1562_00435 PF04715 Anthranilate synthase component I, N terminal region SynA1562_00435 PF00425 chorismate binding enzyme SynA1562_00436 PF02531 PsaD SynA1562_00438 PF01098 Cell cycle protein SynA1562_00439 PF01883 Iron-sulfur cluster assembly protein SynA1562_00439 PF10609 NUBPL iron-transfer P-loop NTPase SynA1562_00440 PF01218 Coproporphyrinogen III oxidase SynA1562_00444 PF00570 HRDC domain SynA1562_00444 PF01612 3'-5' exonuclease SynA1562_00450 PF00248 Aldo/keto reductase family SynA1562_00452 PF00586 AIR synthase related protein, N-terminal domain SynA1562_00452 PF02769 AIR synthase related protein, C-terminal domain SynA1562_00453 PF03330 Lytic transglycolase SynA1562_00454 PF02569 Pantoate-beta-alanine ligase SynA1562_00454 PF02224 Cytidylate kinase SynA1562_00455 PF01451 Low molecular weight phosphotyrosine protein phosphatase SynA1562_00457 PF03130 PBS lyase HEAT-like repeat SynA1562_00458 PF06206 CpeT/CpcT family (DUF1001) SynA1562_00459 PF00502 Phycobilisome protein SynA1562_00460 PF00502 Phycobilisome protein SynA1562_00461 PF05996 Ferredoxin-dependent bilin reductase SynA1562_00462 PF05996 Ferredoxin-dependent bilin reductase SynA1562_00463 PF09367 CpeS-like protein SynA1562_00465 PF00502 Phycobilisome protein SynA1562_00466 PF00502 Phycobilisome protein SynA1562_00467 PF10847 Protein of unknown function (DUF2656) SynA1562_00473 PF12833 Helix-turn-helix domain SynA1562_00476 PF00427 Phycobilisome Linker polypeptide SynA1562_00477 PF00502 Phycobilisome protein SynA1562_00478 PF00502 Phycobilisome protein SynA1562_00484 PF06206 CpeT/CpcT family (DUF1001) SynA1562_00485 PF09367 CpeS-like protein SynA1562_00487 PF01383 CpcD/allophycocyanin linker domain SynA1562_00487 PF00427 Phycobilisome Linker polypeptide SynA1562_00488 PF00427 Phycobilisome Linker polypeptide SynA1562_00489 PF01383 CpcD/allophycocyanin linker domain SynA1562_00489 PF00427 Phycobilisome Linker polypeptide SynA1562_00491 PF00427 Phycobilisome Linker polypeptide SynA1562_00501 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SynA1562_00502 PF02772 S-adenosylmethionine synthetase, central domain SynA1562_00502 PF00438 S-adenosylmethionine synthetase, N-terminal domain SynA1562_00502 PF02773 S-adenosylmethionine synthetase, C-terminal domain SynA1562_00504 PF00575 S1 RNA binding domain SynA1562_00505 PF03477 ATP cone domain SynA1562_00506 PF01405 Photosystem II reaction centre T protein SynA1562_00507 PF00421 Photosystem II protein SynA1562_00509 PF05151 Photosystem II reaction centre M protein (PsbM) SynA1562_00510 PF00582 Universal stress protein family SynA1562_00512 PF17782 DprA winged helix domain SynA1562_00512 PF02481 DNA recombination-mediator protein A SynA1562_00513 PF05175 Methyltransferase small domain SynA1562_00514 PF03481 Putative GTP-binding controlling metal-binding SynA1562_00514 PF01300 Telomere recombination SynA1562_00517 PF00072 Response regulator receiver domain SynA1562_00517 PF00196 Bacterial regulatory proteins, luxR family SynA1562_00518 PF03776 Septum formation topological specificity factor MinE SynA1562_00519 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain SynA1562_00520 PF03775 Septum formation inhibitor MinC, C-terminal domain SynA1562_00521 PF01966 HD domain SynA1562_00522 PF03572 Peptidase family S41 SynA1562_00522 PF00595 PDZ domain SynA1562_00523 PF00033 Cytochrome b/b6/petB SynA1562_00524 PF00032 Cytochrome b(C-terminal)/b6/petD SynA1562_00533 PF13419 Haloacid dehalogenase-like hydrolase SynA1562_00534 PF00596 Class II Aldolase and Adducin N-terminal domain SynA1562_00535 PF01008 Initiation factor 2 subunit family SynA1562_00536 PF06827 Zinc finger found in FPG and IleRS SynA1562_00536 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain SynA1562_00536 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain SynA1562_00537 PF02427 Photosystem I reaction centre subunit IV / PsaE SynA1562_00539 PF00271 Helicase conserved C-terminal domain SynA1562_00539 PF09382 RQC domain SynA1562_00539 PF16124 RecQ zinc-binding SynA1562_00539 PF00570 HRDC domain SynA1562_00539 PF00270 DEAD/DEAH box helicase SynA1562_00540 PF05257 CHAP domain SynA1562_00540 PF01476 LysM domain SynA1562_00541 PF00171 Aldehyde dehydrogenase family SynA1562_00542 PF00128 Alpha amylase, catalytic domain SynA1562_00542 PF16657 Maltogenic Amylase, C-terminal domain SynA1562_00545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SynA1562_00545 PF00512 His Kinase A (phospho-acceptor) domain SynA1562_00545 PF00989 PAS fold SynA1562_00545 PF11808 Phosphate regulon sensor protein PhoR SynA1562_00547 PF01266 FAD dependent oxidoreductase SynA1562_00547 PF16901 C-terminal domain of alpha-glycerophosphate oxidase SynA1562_00548 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SynA1562_00548 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SynA1562_00549 PF00128 Alpha amylase, catalytic domain SynA1562_00549 PF02903 Alpha amylase, N-terminal ig-like domain SynA1562_00549 PF16657 Maltogenic Amylase, C-terminal domain SynA1562_00552 PF01220 Dehydroquinase class II SynA1562_00554 PF00916 Sulfate permease family SynA1562_00554 PF01740 STAS domain SynA1562_00555 PF07884 Vitamin K epoxide reductase family SynA1562_00556 PF01556 DnaJ C terminal domain SynA1562_00556 PF00226 DnaJ domain SynA1562_00557 PF00490 Delta-aminolevulinic acid dehydratase SynA1562_00559 PF01713 Smr domain SynA1562_00559 PF00488 MutS domain V SynA1562_00560 PF17912 MalK OB fold domain SynA1562_00560 PF00005 ABC transporter SynA1562_00561 PF01018 GTP1/OBG SynA1562_00561 PF01926 50S ribosome-binding GTPase SynA1562_00564 PF16326 ABC transporter C-terminal domain SynA1562_00564 PF00005 ABC transporter SynA1562_00564 PF12848 ABC transporter SynA1562_00566 PF13409 Glutathione S-transferase, N-terminal domain SynA1562_00567 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family SynA1562_00570 PF00124 Photosynthetic reaction centre protein SynA1562_00571 PF01679 Proteolipid membrane potential modulator SynA1562_00606 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SynA1562_00607 PF00459 Inositol monophosphatase family SynA1562_00608 PF00013 KH domain SynA1562_00608 PF03725 3' exoribonuclease family, domain 2 SynA1562_00608 PF01138 3' exoribonuclease family, domain 1 SynA1562_00608 PF00575 S1 RNA binding domain SynA1562_00608 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain SynA1562_00609 PF00253 Ribosomal protein S14p/S29e SynA1562_00610 PF02163 Peptidase family M50 SynA1562_00610 PF13180 PDZ domain SynA1562_00611 PF02403 Seryl-tRNA synthetase N-terminal domain SynA1562_00611 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SynA1562_00613 PF01434 Peptidase family M41 SynA1562_00613 PF06480 FtsH Extracellular SynA1562_00613 PF17862 AAA+ lid domain SynA1562_00613 PF00004 ATPase family associated with various cellular activities (AAA) SynA1562_00615 PF02096 60Kd inner membrane protein SynA1562_00617 PF00825 Ribonuclease P SynA1562_00618 PF00468 Ribosomal protein L34 SynA1562_00621 PF01343 Peptidase family S49 SynA1562_00622 PF00892 EamA-like transporter family SynA1562_00623 PF13439 Glycosyltransferase Family 4 SynA1562_00623 PF00534 Glycosyl transferases group 1 SynA1562_00624 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase SynA1562_00626 PF04012 PspA/IM30 family SynA1562_00627 PF00085 Thioredoxin SynA1562_00628 PF00155 Aminotransferase class I and II SynA1562_00631 PF02237 Biotin protein ligase C terminal domain SynA1562_00631 PF03099 Biotin/lipoate A/B protein ligase family SynA1562_00631 PF08279 HTH domain SynA1562_00632 PF04225 Opacity-associated protein A LysM-like domain SynA1562_00632 PF01551 Peptidase family M23 SynA1562_00633 PF00486 Transcriptional regulatory protein, C terminal SynA1562_00633 PF00072 Response regulator receiver domain SynA1562_00634 PF00072 Response regulator receiver domain SynA1562_00634 PF00486 Transcriptional regulatory protein, C terminal SynA1562_00635 PF00005 ABC transporter SynA1562_00635 PF12704 MacB-like periplasmic core domain SynA1562_00635 PF02687 FtsX-like permease family SynA1562_00636 PF00361 Proton-conducting membrane transporter SynA1562_00637 PF01131 DNA topoisomerase SynA1562_00637 PF13368 Topoisomerase C-terminal repeat SynA1562_00637 PF01751 Toprim domain SynA1562_00644 PF00677 Lumazine binding domain SynA1562_00646 PF00510 Cytochrome c oxidase subunit III SynA1562_00647 PF00115 Cytochrome C and Quinol oxidase polypeptide I SynA1562_00648 PF02790 Cytochrome C oxidase subunit II, transmembrane domain SynA1562_00648 PF00116 Cytochrome C oxidase subunit II, periplasmic domain SynA1562_00649 PF02628 Cytochrome oxidase assembly protein SynA1562_00650 PF01040 UbiA prenyltransferase family SynA1562_00651 PF13732 Domain of unknown function (DUF4162) SynA1562_00651 PF00005 ABC transporter SynA1562_00654 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase SynA1562_00655 PF00118 TCP-1/cpn60 chaperonin family SynA1562_00658 PF00999 Sodium/hydrogen exchanger family SynA1562_00658 PF02254 TrkA-N domain SynA1562_00658 PF02080 TrkA-C domain SynA1562_00660 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase SynA1562_00661 PF02016 LD-carboxypeptidase N-terminal domain SynA1562_00661 PF17676 LD-carboxypeptidase C-terminal domain SynA1562_00662 PF01040 UbiA prenyltransferase family SynA1562_00663 PF02541 Ppx/GppA phosphatase family SynA1562_00666 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SynA1562_00667 PF01790 Prolipoprotein diacylglyceryl transferase SynA1562_00668 PF16639 Apocytochrome F, N-terminal SynA1562_00668 PF01333 Apocytochrome F, C-terminal SynA1562_00669 PF00355 Rieske [2Fe-2S] domain SynA1562_00671 PF00902 Sec-independent protein translocase protein (TatC) SynA1562_00672 PF05670 NFACT protein RNA binding domain SynA1562_00673 PF00625 Guanylate kinase SynA1562_00674 PF01701 Photosystem I reaction centre subunit IX / PsaJ SynA1562_00675 PF02507 Photosystem I reaction centre subunit III SynA1562_00676 PF00814 Glycoprotease family SynA1562_00677 PF00762 Ferrochelatase SynA1562_00678 PF00437 Type II/IV secretion system protein SynA1562_00679 PF02350 UDP-N-acetylglucosamine 2-epimerase SynA1562_00683 PF00749 tRNA synthetases class I (E and Q), catalytic domain SynA1562_00687 PF01245 Ribosomal protein L19 SynA1562_00689 PF00557 Metallopeptidase family M24 SynA1562_00690 PF00106 short chain dehydrogenase SynA1562_00692 PF07085 DRTGG domain SynA1562_00695 PF04461 Protein of unknown function (DUF520) SynA1562_00698 PF00156 Phosphoribosyl transferase domain SynA1562_00700 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SynA1562_00702 PF00202 Aminotransferase class-III SynA1562_00704 PF01565 FAD binding domain SynA1562_00704 PF02913 FAD linked oxidases, C-terminal domain SynA1562_00705 PF03372 Endonuclease/Exonuclease/phosphatase family SynA1562_00709 PF01434 Peptidase family M41 SynA1562_00709 PF17862 AAA+ lid domain SynA1562_00709 PF00004 ATPase family associated with various cellular activities (AAA) SynA1562_00709 PF06480 FtsH Extracellular SynA1562_00710 PF01969 Protein of unknown function DUF111 SynA1562_00714 PF08402 TOBE domain SynA1562_00714 PF00005 ABC transporter SynA1562_00716 PF02492 CobW/HypB/UreG, nucleotide-binding domain SynA1562_00716 PF07683 Cobalamin synthesis protein cobW C-terminal domain SynA1562_00717 PF01329 Pterin 4 alpha carbinolamine dehydratase SynA1562_00718 PF01894 Uncharacterised protein family UPF0047 SynA1562_00721 PF02074 Carboxypeptidase Taq (M32) metallopeptidase SynA1562_00722 PF00719 Inorganic pyrophosphatase SynA1562_00724 PF03900 Porphobilinogen deaminase, C-terminal domain SynA1562_00724 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain SynA1562_00726 PF04542 Sigma-70 region 2 SynA1562_00726 PF04545 Sigma-70, region 4 SynA1562_00726 PF04539 Sigma-70 region 3 SynA1562_00726 PF00140 Sigma-70 factor, region 1.2 SynA1562_00727 PF00270 DEAD/DEAH box helicase SynA1562_00727 PF18319 PriA DNA helicase Cys-rich region (CRR) domain SynA1562_00727 PF18074 Primosomal protein N C-terminal domain SynA1562_00727 PF17764 3′ DNA-binding domain (3′BD) SynA1562_00727 PF00271 Helicase conserved C-terminal domain SynA1562_00729 PF00696 Amino acid kinase family SynA1562_00730 PF11016 Protein of unknown function (DUF2854) SynA1562_00733 PF02571 Precorrin-6x reductase CbiJ/CobK SynA1562_00734 PF03091 CutA1 divalent ion tolerance protein SynA1562_00735 PF00294 pfkB family carbohydrate kinase SynA1562_00736 PF00709 Adenylosuccinate synthetase SynA1562_00737 PF13326 Photosystem II Pbs27 SynA1562_00738 PF03129 Anticodon binding domain SynA1562_00738 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SynA1562_00738 PF04073 Aminoacyl-tRNA editing domain SynA1562_00741 PF00719 Inorganic pyrophosphatase SynA1562_00745 PF10502 Signal peptidase, peptidase S26 SynA1562_00747 PF00300 Histidine phosphatase superfamily (branch 1) SynA1562_00748 PF02517 CPBP intramembrane metalloprotease SynA1562_00750 PF00905 Penicillin binding protein transpeptidase domain SynA1562_00750 PF03717 Penicillin-binding Protein dimerisation domain SynA1562_00750 PF03793 PASTA domain SynA1562_00751 PF13202 EF hand SynA1562_00751 PF00923 Transaldolase/Fructose-6-phosphate aldolase SynA1562_00753 PF03209 PUCC protein SynA1562_00755 PF03441 FAD binding domain of DNA photolyase SynA1562_00755 PF00875 DNA photolyase SynA1562_00756 PF01494 FAD binding domain SynA1562_00757 PF01765 Ribosome recycling factor SynA1562_00758 PF00696 Amino acid kinase family SynA1562_00760 PF12557 Cob(I)alamin adenosyltransferase N terminal SynA1562_00760 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP SynA1562_00761 PF01209 ubiE/COQ5 methyltransferase family SynA1562_00763 PF00762 Ferrochelatase SynA1562_00764 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SynA1562_00764 PF00205 Thiamine pyrophosphate enzyme, central domain SynA1562_00764 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SynA1562_00770 PF02578 Multi-copper polyphenol oxidoreductase laccase SynA1562_00772 PF00575 S1 RNA binding domain SynA1562_00774 PF11266 Long-chain fatty aldehyde decarbonylase SynA1562_00776 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit SynA1562_00778 PF01227 GTP cyclohydrolase I SynA1562_00779 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase SynA1562_00780 PF00571 CBS domain SynA1562_00780 PF02163 Peptidase family M50 SynA1562_00781 PF03099 Biotin/lipoate A/B protein ligase family SynA1562_00782 PF01925 Sulfite exporter TauE/SafE SynA1562_00784 PF07465 Photosystem I protein M (PsaM) SynA1562_00786 PF00106 short chain dehydrogenase SynA1562_00787 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family SynA1562_00789 PF00148 Nitrogenase component 1 type Oxidoreductase SynA1562_00789 PF08369 Proto-chlorophyllide reductase 57 kD subunit SynA1562_00790 PF00148 Nitrogenase component 1 type Oxidoreductase SynA1562_00793 PF01725 Ham1 family SynA1562_00794 PF00936 BMC domain SynA1562_00795 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain SynA1562_00795 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain SynA1562_00796 PF00101 Ribulose bisphosphate carboxylase, small chain SynA1562_00801 PF00936 BMC domain SynA1562_00802 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus SynA1562_00802 PF00361 Proton-conducting membrane transporter SynA1562_00802 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus SynA1562_00803 PF00361 Proton-conducting membrane transporter SynA1562_00806 PF17866 AAA lid domain SynA1562_00806 PF00004 ATPase family associated with various cellular activities (AAA) SynA1562_00809 PF07685 CobB/CobQ-like glutamine amidotransferase domain SynA1562_00809 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain SynA1562_00811 PF02545 Maf-like protein SynA1562_00818 PF00163 Ribosomal protein S4/S9 N-terminal domain SynA1562_00818 PF01479 S4 domain SynA1562_00819 PF01809 Putative membrane protein insertion efficiency factor SynA1562_00821 PF02875 Mur ligase family, glutamate ligase domain SynA1562_00821 PF08245 Mur ligase middle domain SynA1562_00821 PF01225 Mur ligase family, catalytic domain SynA1562_00828 PF07238 PilZ domain SynA1562_00828 PF03552 Cellulose synthase SynA1562_00828 PF00535 Glycosyl transferase family 2 SynA1562_00831 PF01106 NifU-like domain SynA1562_00832 PF06039 Malate:quinone oxidoreductase (Mqo) SynA1562_00833 PF00893 Small Multidrug Resistance protein SynA1562_00834 PF06421 GTP-binding protein LepA C-terminus SynA1562_00834 PF00679 Elongation factor G C-terminus SynA1562_00834 PF03144 Elongation factor Tu domain 2 SynA1562_00834 PF00009 Elongation factor Tu GTP binding domain SynA1562_00838 PF00989 PAS fold SynA1562_00838 PF00512 His Kinase A (phospho-acceptor) domain SynA1562_00838 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SynA1562_00838 PF00672 HAMP domain SynA1562_00838 PF18698 Histidine kinase sensor domain SynA1562_00840 PF12911 N-terminal TM domain of oligopeptide transport permease C SynA1562_00840 PF00528 Binding-protein-dependent transport system inner membrane component SynA1562_00843 PF00588 SpoU rRNA Methylase family SynA1562_00843 PF12105 SpoU, rRNA methylase, C-terminal SynA1562_00844 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain SynA1562_00845 PF01029 NusB family SynA1562_00845 PF01189 16S rRNA methyltransferase RsmB/F SynA1562_00846 PF00912 Transglycosylase SynA1562_00846 PF00905 Penicillin binding protein transpeptidase domain SynA1562_00847 PF01040 UbiA prenyltransferase family SynA1562_00849 PF00977 Histidine biosynthesis protein SynA1562_00850 PF01209 ubiE/COQ5 methyltransferase family SynA1562_00854 PF02091 Glycyl-tRNA synthetase alpha subunit SynA1562_00858 PF00128 Alpha amylase, catalytic domain SynA1562_00858 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SynA1562_00864 PF00205 Thiamine pyrophosphate enzyme, central domain SynA1562_00864 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SynA1562_00864 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SynA1562_00868 PF00753 Metallo-beta-lactamase superfamily SynA1562_00868 PF12706 Beta-lactamase superfamily domain SynA1562_00869 PF04966 Carbohydrate-selective porin, OprB family SynA1562_00869 PF00395 S-layer homology domain SynA1562_00872 PF00534 Glycosyl transferases group 1 SynA1562_00873 PF02397 Bacterial sugar transferase SynA1562_00874 PF03186 CobD/Cbib protein SynA1562_00875 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain SynA1562_00875 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain SynA1562_00876 PF00574 Clp protease SynA1562_00877 PF00574 Clp protease SynA1562_00879 PF04055 Radical SAM superfamily SynA1562_00882 PF02548 Ketopantoate hydroxymethyltransferase SynA1562_00883 PF12327 FtsZ family, C-terminal domain SynA1562_00883 PF00091 Tubulin/FtsZ family, GTPase domain SynA1562_00886 PF07478 D-ala D-ala ligase C-terminus SynA1562_00886 PF01820 D-ala D-ala ligase N-terminus SynA1562_00887 PF04055 Radical SAM superfamily SynA1562_00887 PF01938 TRAM domain SynA1562_00887 PF00919 Uncharacterized protein family UPF0004 SynA1562_00888 PF13378 Enolase C-terminal domain-like SynA1562_00888 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain SynA1562_00895 PF02875 Mur ligase family, glutamate ligase domain SynA1562_00895 PF08245 Mur ligase middle domain SynA1562_00896 PF00202 Aminotransferase class-III SynA1562_00897 PF00202 Aminotransferase class-III SynA1562_00898 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SynA1562_00901 PF00588 SpoU rRNA Methylase family SynA1562_00901 PF08032 RNA 2'-O ribose methyltransferase substrate binding SynA1562_00902 PF07992 Pyridine nucleotide-disulphide oxidoreductase SynA1562_00902 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SynA1562_00903 PF00218 Indole-3-glycerol phosphate synthase SynA1562_00906 PF09055 Nickel-containing superoxide dismutase SynA1562_00907 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SynA1562_00909 PF00795 Carbon-nitrogen hydrolase SynA1562_00911 PF01256 Carbohydrate kinase SynA1562_00911 PF03853 YjeF-related protein N-terminus SynA1562_00912 PF00140 Sigma-70 factor, region 1.2 SynA1562_00912 PF04539 Sigma-70 region 3 SynA1562_00912 PF04545 Sigma-70, region 4 SynA1562_00912 PF04542 Sigma-70 region 2 SynA1562_00913 PF00676 Dehydrogenase E1 component SynA1562_00916 PF02978 Signal peptide binding domain SynA1562_00916 PF00448 SRP54-type protein, GTPase domain SynA1562_00916 PF02881 SRP54-type protein, helical bundle domain SynA1562_00917 PF00886 Ribosomal protein S16 SynA1562_00918 PF02562 PhoH-like protein SynA1562_00919 PF01027 Inhibitor of apoptosis-promoting Bax1 SynA1562_00921 PF07650 KH domain SynA1562_00921 PF01926 50S ribosome-binding GTPase SynA1562_00924 PF01746 tRNA (Guanine-1)-methyltransferase SynA1562_00926 PF00731 AIR carboxylase SynA1562_00930 PF17792 ThiD2 family SynA1562_00930 PF02581 Thiamine monophosphate synthase SynA1562_00931 PF01687 Riboflavin kinase SynA1562_00931 PF06574 FAD synthetase SynA1562_00934 PF01975 Survival protein SurE SynA1562_00935 PF01409 tRNA synthetases class II core domain (F) SynA1562_00935 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain SynA1562_00938 PF01513 ATP-NAD kinase SynA1562_00939 PF00486 Transcriptional regulatory protein, C terminal SynA1562_00939 PF00072 Response regulator receiver domain SynA1562_00941 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SynA1562_00947 PF01872 RibD C-terminal domain SynA1562_00947 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SynA1562_00949 PF02586 SOS response associated peptidase (SRAP) SynA1562_00950 PF06480 FtsH Extracellular SynA1562_00950 PF17862 AAA+ lid domain SynA1562_00950 PF00004 ATPase family associated with various cellular activities (AAA) SynA1562_00950 PF01434 Peptidase family M41 SynA1562_00951 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SynA1562_00951 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SynA1562_00954 PF01726 LexA DNA binding domain SynA1562_00954 PF00717 Peptidase S24-like SynA1562_00962 PF00589 Phage integrase family SynA1562_00962 PF13495 Phage integrase, N-terminal SAM-like domain SynA1562_00975 PF01042 Endoribonuclease L-PSP SynA1562_00976 PF16123 Hydroxyacylglutathione hydrolase C-terminus SynA1562_00976 PF00753 Metallo-beta-lactamase superfamily SynA1562_00977 PF01634 ATP phosphoribosyltransferase SynA1562_00978 PF00664 ABC transporter transmembrane region SynA1562_00978 PF00005 ABC transporter SynA1562_00979 PF00583 Acetyltransferase (GNAT) family SynA1562_00980 PF00535 Glycosyl transferase family 2 SynA1562_00982 PF13180 PDZ domain SynA1562_00983 PF11638 DnaA N-terminal domain SynA1562_00983 PF08299 Bacterial dnaA protein helix-turn-helix SynA1562_00983 PF00308 Bacterial dnaA protein SynA1562_00988 PF07992 Pyridine nucleotide-disulphide oxidoreductase SynA1562_00988 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SynA1562_00989 PF00732 GMC oxidoreductase SynA1562_00989 PF05199 GMC oxidoreductase SynA1562_00990 PF00205 Thiamine pyrophosphate enzyme, central domain SynA1562_00990 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SynA1562_00990 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SynA1562_00991 PF00510 Cytochrome c oxidase subunit III SynA1562_00992 PF00115 Cytochrome C and Quinol oxidase polypeptide I SynA1562_00993 PF02790 Cytochrome C oxidase subunit II, transmembrane domain SynA1562_00993 PF00116 Cytochrome C oxidase subunit II, periplasmic domain SynA1562_00996 PF01699 Sodium/calcium exchanger protein SynA1562_00997 PF00916 Sulfate permease family SynA1562_00997 PF01740 STAS domain SynA1562_00998 PF01979 Amidohydrolase family SynA1562_01001 PF10716 NADH dehydrogenase transmembrane subunit SynA1562_01003 PF00290 Tryptophan synthase alpha chain SynA1562_01006 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SynA1562_01013 PF04539 Sigma-70 region 3 SynA1562_01013 PF04542 Sigma-70 region 2 SynA1562_01013 PF00140 Sigma-70 factor, region 1.2 SynA1562_01013 PF04545 Sigma-70, region 4 SynA1562_01017 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase SynA1562_01017 PF01502 Phosphoribosyl-AMP cyclohydrolase SynA1562_01020 PF00230 Major intrinsic protein SynA1562_01021 PF10431 C-terminal, D2-small domain, of ClpB protein SynA1562_01021 PF02861 Clp amino terminal domain, pathogenicity island component SynA1562_01021 PF17871 AAA lid domain SynA1562_01021 PF07724 AAA domain (Cdc48 subfamily) SynA1562_01021 PF00004 ATPase family associated with various cellular activities (AAA) SynA1562_01035 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SynA1562_01036 PF00127 Copper binding proteins, plastocyanin/azurin family SynA1562_01038 PF01208 Uroporphyrinogen decarboxylase (URO-D) SynA1562_01039 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SynA1562_01039 PF02806 Alpha amylase, C-terminal all-beta domain SynA1562_01039 PF00128 Alpha amylase, catalytic domain SynA1562_01044 PF10726 Protein of function (DUF2518) SynA1562_01046 PF00480 ROK family SynA1562_01047 PF00171 Aldehyde dehydrogenase family SynA1562_01050 PF01432 Peptidase family M3 SynA1562_01051 PF00361 Proton-conducting membrane transporter SynA1562_01052 PF08544 GHMP kinases C terminal SynA1562_01052 PF00288 GHMP kinases N terminal domain SynA1562_01053 PF02685 Glucokinase SynA1562_01055 PF03129 Anticodon binding domain SynA1562_01055 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SynA1562_01055 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SynA1562_01058 PF00579 tRNA synthetases class I (W and Y) SynA1562_01061 PF01545 Cation efflux family SynA1562_01061 PF16916 Dimerisation domain of Zinc Transporter SynA1562_01064 PF00124 Photosynthetic reaction centre protein SynA1562_01069 PF01202 Shikimate kinase SynA1562_01086 PF01165 Ribosomal protein S21 SynA1562_01105 PF00355 Rieske [2Fe-2S] domain SynA1562_01105 PF00848 Ring hydroxylating alpha subunit (catalytic domain) SynA1562_01106 PF00005 ABC transporter SynA1562_01107 PF00528 Binding-protein-dependent transport system inner membrane component SynA1562_01109 PF02492 CobW/HypB/UreG, nucleotide-binding domain SynA1562_01110 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA SynA1562_01111 PF00491 Arginase family SynA1562_01119 PF00106 short chain dehydrogenase SynA1562_01120 PF01556 DnaJ C terminal domain SynA1562_01120 PF00226 DnaJ domain SynA1562_01120 PF00684 DnaJ central domain SynA1562_01136 PF00395 S-layer homology domain SynA1562_01136 PF04966 Carbohydrate-selective porin, OprB family SynA1562_01137 PF04966 Carbohydrate-selective porin, OprB family SynA1562_01137 PF00395 S-layer homology domain SynA1562_01144 PF00124 Photosynthetic reaction centre protein SynA1562_01148 PF10502 Signal peptidase, peptidase S26 SynA1562_01149 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SynA1562_01149 PF16582 Middle domain of thiamine pyrophosphate SynA1562_01149 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SynA1562_01150 PF00378 Enoyl-CoA hydratase/isomerase SynA1562_01151 PF01476 LysM domain SynA1562_01151 PF03734 L,D-transpeptidase catalytic domain SynA1562_01152 PF08323 Starch synthase catalytic domain SynA1562_01152 PF00534 Glycosyl transferases group 1 SynA1562_01154 PF01225 Mur ligase family, catalytic domain SynA1562_01154 PF02875 Mur ligase family, glutamate ligase domain SynA1562_01154 PF08245 Mur ligase middle domain SynA1562_01155 PF12804 MobA-like NTP transferase domain SynA1562_01155 PF00132 Bacterial transferase hexapeptide (six repeats) SynA1562_01157 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SynA1562_01158 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase SynA1562_01159 PF04029 2-phosphosulpholactate phosphatase SynA1562_01160 PF00795 Carbon-nitrogen hydrolase SynA1562_01161 PF01520 N-acetylmuramoyl-L-alanine amidase SynA1562_01162 PF01177 Asp/Glu/Hydantoin racemase SynA1562_01163 PF00348 Polyprenyl synthetase SynA1562_01164 PF13419 Haloacid dehalogenase-like hydrolase SynA1562_01165 PF13193 AMP-binding enzyme C-terminal domain SynA1562_01165 PF16177 Acetyl-coenzyme A synthetase N-terminus SynA1562_01165 PF00501 AMP-binding enzyme SynA1562_01167 PF00578 AhpC/TSA family SynA1562_01168 PF02811 PHP domain SynA1562_01168 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SynA1562_01168 PF14579 Helix-hairpin-helix motif SynA1562_01168 PF07733 Bacterial DNA polymerase III alpha NTPase domain SynA1562_01168 PF00929 Exonuclease SynA1562_01170 PF12849 PBP superfamily domain SynA1562_01171 PF12849 PBP superfamily domain SynA1562_01172 PF13545 Crp-like helix-turn-helix domain SynA1562_01177 PF01625 Peptide methionine sulfoxide reductase SynA1562_01182 PF00664 ABC transporter transmembrane region SynA1562_01182 PF00005 ABC transporter SynA1562_01183 PF02885 Glycosyl transferase family, helical bundle domain SynA1562_01183 PF00591 Glycosyl transferase family, a/b domain SynA1562_01184 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain SynA1562_01184 PF00117 Glutamine amidotransferase class-I SynA1562_01186 PF00636 Ribonuclease III domain SynA1562_01187 PF00588 SpoU rRNA Methylase family SynA1562_01187 PF08032 RNA 2'-O ribose methyltransferase substrate binding SynA1562_01189 PF01425 Amidase SynA1562_01190 PF02811 PHP domain SynA1562_01190 PF14579 Helix-hairpin-helix motif SynA1562_01190 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SynA1562_01190 PF07733 Bacterial DNA polymerase III alpha NTPase domain SynA1562_01190 PF01336 OB-fold nucleic acid binding domain SynA1562_01192 PF00312 Ribosomal protein S15 SynA1562_01193 PF01330 RuvA N terminal domain SynA1562_01193 PF07499 RuvA, C-terminal domain SynA1562_01194 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L SynA1562_01195 PF00361 Proton-conducting membrane transporter SynA1562_01201 PF00520 Ion transport protein SynA1562_01201 PF00027 Cyclic nucleotide-binding domain SynA1562_01202 PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) SynA1562_01206 PF00892 EamA-like transporter family SynA1562_01207 PF01807 CHC2 zinc finger SynA1562_01207 PF08275 DNA primase catalytic core, N-terminal domain SynA1562_01207 PF10410 DnaB-helicase binding domain of primase SynA1562_01210 PF00817 impB/mucB/samB family SynA1562_01210 PF13438 Domain of unknown function (DUF4113) SynA1562_01210 PF11799 impB/mucB/samB family C-terminal domain SynA1562_01211 PF00717 Peptidase S24-like SynA1562_01215 PF02590 Predicted SPOUT methyltransferase SynA1562_01219 PF02021 Uncharacterised protein family UPF0102 SynA1562_01220 PF00398 Ribosomal RNA adenine dimethylase SynA1562_01221 PF00288 GHMP kinases N terminal domain SynA1562_01221 PF08544 GHMP kinases C terminal SynA1562_01223 PF02779 Transketolase, pyrimidine binding domain SynA1562_01223 PF02780 Transketolase, C-terminal domain SynA1562_01223 PF00364 Biotin-requiring enzyme SynA1562_01224 PF02355 Protein export membrane protein SynA1562_01224 PF07549 SecD/SecF GG Motif SynA1562_01225 PF02355 Protein export membrane protein SynA1562_01230 PF01594 AI-2E family transporter SynA1562_01231 PF03912 Psb28 protein SynA1562_01233 PF16416 ARM-like repeat domain, GUN4-N terminal SynA1562_01233 PF05419 GUN4-like SynA1562_01238 PF01209 ubiE/COQ5 methyltransferase family SynA1562_01239 PF00120 Glutamine synthetase, catalytic domain SynA1562_01239 PF03951 Glutamine synthetase, beta-Grasp domain SynA1562_01240 PF00502 Phycobilisome protein SynA1562_01241 PF00266 Aminotransferase class-V SynA1562_01242 PF14437 MafB19-like deaminase SynA1562_01243 PF00282 Pyridoxal-dependent decarboxylase conserved domain SynA1562_01245 PF01252 Signal peptidase (SPase) II SynA1562_01246 PF02632 BioY family SynA1562_01248 PF05193 Peptidase M16 inactive domain SynA1562_01248 PF00675 Insulinase (Peptidase family M16) SynA1562_01249 PF05193 Peptidase M16 inactive domain SynA1562_01249 PF00675 Insulinase (Peptidase family M16) SynA1562_01250 PF05996 Ferredoxin-dependent bilin reductase SynA1562_01253 PF00005 ABC transporter SynA1562_01255 PF00535 Glycosyl transferase family 2 SynA1562_01256 PF00318 Ribosomal protein S2 SynA1562_01257 PF00889 Elongation factor TS SynA1562_01259 PF00270 DEAD/DEAH box helicase SynA1562_01259 PF00271 Helicase conserved C-terminal domain SynA1562_01259 PF17191 RecG wedge domain SynA1562_01260 PF01427 D-ala-D-ala dipeptidase SynA1562_01261 PF01077 Nitrite and sulphite reductase 4Fe-4S domain SynA1562_01261 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain SynA1562_01262 PF02092 Glycyl-tRNA synthetase beta subunit SynA1562_01264 PF01494 FAD binding domain SynA1562_01266 PF01136 Peptidase family U32 SynA1562_01266 PF12392 Collagenase SynA1562_01267 PF00679 Elongation factor G C-terminus SynA1562_01267 PF00009 Elongation factor Tu GTP binding domain SynA1562_01267 PF03144 Elongation factor Tu domain 2 SynA1562_01267 PF14492 Elongation Factor G, domain II SynA1562_01270 PF00005 ABC transporter SynA1562_01272 PF01578 Cytochrome C assembly protein SynA1562_01278 PF00834 Ribulose-phosphate 3 epimerase family SynA1562_01279 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded SynA1562_01280 PF01488 Shikimate / quinate 5-dehydrogenase SynA1562_01280 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain SynA1562_01280 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain SynA1562_01281 PF00483 Nucleotidyl transferase SynA1562_01282 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain SynA1562_01282 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SynA1562_01283 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SynA1562_01286 PF00920 Dehydratase family SynA1562_01289 PF00805 Pentapeptide repeats (8 copies) SynA1562_01290 PF02492 CobW/HypB/UreG, nucleotide-binding domain SynA1562_01290 PF07683 Cobalamin synthesis protein cobW C-terminal domain SynA1562_01293 PF00106 short chain dehydrogenase SynA1562_01295 PF03641 Possible lysine decarboxylase SynA1562_01296 PF00106 short chain dehydrogenase SynA1562_01303 PF17975 Ribonucleotide reductase alpha domain SynA1562_01304 PF13649 Methyltransferase domain SynA1562_01305 PF00009 Elongation factor Tu GTP binding domain SynA1562_01305 PF16658 Class II release factor RF3, C-terminal domain SynA1562_01308 PF01430 Hsp33 protein SynA1562_01309 PF00005 ABC transporter SynA1562_01311 PF04452 RNA methyltransferase SynA1562_01313 PF01940 Integral membrane protein DUF92 SynA1562_01314 PF04539 Sigma-70 region 3 SynA1562_01314 PF00140 Sigma-70 factor, region 1.2 SynA1562_01314 PF04545 Sigma-70, region 4 SynA1562_01314 PF04542 Sigma-70 region 2 SynA1562_01319 PF03466 LysR substrate binding domain SynA1562_01319 PF00005 ABC transporter SynA1562_01321 PF00155 Aminotransferase class I and II SynA1562_01323 PF03167 Uracil DNA glycosylase superfamily SynA1562_01324 PF04551 GcpE protein SynA1562_01325 PF00595 PDZ domain SynA1562_01325 PF03572 Peptidase family S41 SynA1562_01327 PF02559 CarD-like/TRCF domain SynA1562_01327 PF00270 DEAD/DEAH box helicase SynA1562_01327 PF00271 Helicase conserved C-terminal domain SynA1562_01327 PF03461 TRCF domain SynA1562_01327 PF17757 UvrB interaction domain SynA1562_01334 PF03741 Integral membrane protein TerC family SynA1562_01337 PF00551 Formyl transferase SynA1562_01337 PF02911 Formyl transferase, C-terminal domain SynA1562_01339 PF01523 Putative modulator of DNA gyrase SynA1562_01340 PF02915 Rubrerythrin SynA1562_01343 PF02441 Flavoprotein SynA1562_01344 PF08206 Ribonuclease B OB domain SynA1562_01344 PF17876 Cold shock domain SynA1562_01344 PF00575 S1 RNA binding domain SynA1562_01344 PF00773 RNB domain SynA1562_01346 PF01169 Uncharacterized protein family UPF0016 SynA1562_01348 PF05969 Photosystem II complex subunit Ycf12 SynA1562_01349 PF01368 DHH family SynA1562_01349 PF17768 RecJ OB domain SynA1562_01349 PF10141 Single-strand DNA-specific exonuclease, C terminal domain SynA1562_01349 PF02272 DHHA1 domain SynA1562_01350 PF13419 Haloacid dehalogenase-like hydrolase SynA1562_01353 PF01783 Ribosomal L32p protein family SynA1562_01354 PF17862 AAA+ lid domain SynA1562_01354 PF06480 FtsH Extracellular SynA1562_01354 PF01434 Peptidase family M41 SynA1562_01354 PF00004 ATPase family associated with various cellular activities (AAA) SynA1562_01355 PF03699 Uncharacterised protein family (UPF0182) SynA1562_01356 PF00578 AhpC/TSA family SynA1562_01356 PF10417 C-terminal domain of 1-Cys peroxiredoxin SynA1562_01359 PF01476 LysM domain SynA1562_01359 PF01551 Peptidase family M23 SynA1562_01359 PF08525 Opacity-associated protein A N-terminal motif SynA1562_01360 PF00588 SpoU rRNA Methylase family SynA1562_01361 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase SynA1562_01362 PF03040 CemA family SynA1562_01366 PF09334 tRNA synthetases class I (M) SynA1562_01366 PF08264 Anticodon-binding domain of tRNA SynA1562_01366 PF00133 tRNA synthetases class I (I, L, M and V) SynA1562_01368 PF00773 RNB domain SynA1562_01369 PF01084 Ribosomal protein S18 SynA1562_01370 PF00471 Ribosomal protein L33 SynA1562_01371 PF03483 B3/4 domain SynA1562_01371 PF03484 tRNA synthetase B5 domain SynA1562_01371 PF03147 Ferredoxin-fold anticodon binding domain SynA1562_01371 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain SynA1562_01371 PF01588 Putative tRNA binding domain SynA1562_01372 PF13847 Methyltransferase domain SynA1562_01373 PF00502 Phycobilisome protein SynA1562_01382 PF00140 Sigma-70 factor, region 1.2 SynA1562_01382 PF04545 Sigma-70, region 4 SynA1562_01382 PF04542 Sigma-70 region 2 SynA1562_01382 PF04539 Sigma-70 region 3 SynA1562_01384 PF08486 Stage II sporulation protein SynA1562_01385 PF00106 short chain dehydrogenase SynA1562_01389 PF02574 Homocysteine S-methyltransferase SynA1562_01389 PF00809 Pterin binding enzyme SynA1562_01389 PF02965 Vitamin B12 dependent methionine synthase, activation domain SynA1562_01389 PF02607 B12 binding domain SynA1562_01389 PF02310 B12 binding domain SynA1562_01390 PF01063 Amino-transferase class IV SynA1562_01391 PF02514 CobN/Magnesium Chelatase SynA1562_01394 PF03653 Uncharacterised protein family (UPF0093) SynA1562_01395 PF04244 Deoxyribodipyrimidine photo-lyase-related protein SynA1562_01397 PF02151 UvrB/uvrC motif SynA1562_01397 PF08459 UvrC Helix-hairpin-helix N-terminal SynA1562_01397 PF12826 Helix-hairpin-helix motif SynA1562_01397 PF01541 GIY-YIG catalytic domain SynA1562_01399 PF01467 Cytidylyltransferase-like SynA1562_01401 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family SynA1562_01404 PF00266 Aminotransferase class-V SynA1562_01405 PF01678 Diaminopimelate epimerase SynA1562_01407 PF08264 Anticodon-binding domain of tRNA SynA1562_01407 PF00133 tRNA synthetases class I (I, L, M and V) SynA1562_01407 PF09334 tRNA synthetases class I (M) SynA1562_01407 PF13603 Leucyl-tRNA synthetase, Domain 2 SynA1562_01408 PF00342 Phosphoglucose isomerase SynA1562_01416 PF00551 Formyl transferase SynA1562_01417 PF01118 Semialdehyde dehydrogenase, NAD binding domain SynA1562_01417 PF02774 Semialdehyde dehydrogenase, dimerisation domain SynA1562_01419 PF00925 GTP cyclohydrolase II SynA1562_01419 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase SynA1562_01420 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SynA1562_01421 PF01048 Phosphorylase superfamily SynA1562_01422 PF13580 SIS domain SynA1562_01424 PF01556 DnaJ C terminal domain SynA1562_01424 PF00226 DnaJ domain SynA1562_01425 PF00012 Hsp70 protein SynA1562_01426 PF00528 Binding-protein-dependent transport system inner membrane component SynA1562_01427 PF00528 Binding-protein-dependent transport system inner membrane component SynA1562_01428 PF00005 ABC transporter SynA1562_01430 PF03476 MOSC N-terminal beta barrel domain SynA1562_01430 PF00111 2Fe-2S iron-sulfur cluster binding domain SynA1562_01430 PF03473 MOSC domain SynA1562_01431 PF00459 Inositol monophosphatase family SynA1562_01432 PF13393 Histidyl-tRNA synthetase SynA1562_01434 PF00183 Hsp90 protein SynA1562_01434 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SynA1562_01435 PF00830 Ribosomal L28 family SynA1562_01436 PF00578 AhpC/TSA family SynA1562_01437 PF00982 Glycosyltransferase family 20 SynA1562_01438 PF01547 Bacterial extracellular solute-binding protein SynA1562_01439 PF00528 Binding-protein-dependent transport system inner membrane component SynA1562_01440 PF00528 Binding-protein-dependent transport system inner membrane component SynA1562_01441 PF17912 MalK OB fold domain SynA1562_01441 PF00005 ABC transporter SynA1562_01443 PF10693 Protein of unknown function (DUF2499) SynA1562_01445 PF01241 Photosystem I psaG / psaK SynA1562_01446 PF01494 FAD binding domain SynA1562_01447 PF02779 Transketolase, pyrimidine binding domain SynA1562_01447 PF02780 Transketolase, C-terminal domain SynA1562_01447 PF13292 1-deoxy-D-xylulose-5-phosphate synthase SynA1562_01448 PF00291 Pyridoxal-phosphate dependent enzyme SynA1562_01448 PF00585 C-terminal regulatory domain of Threonine dehydratase SynA1562_01453 PF00391 PEP-utilising enzyme, mobile domain SynA1562_01453 PF02887 Pyruvate kinase, alpha/beta domain SynA1562_01453 PF00224 Pyruvate kinase, barrel domain SynA1562_01454 PF12704 MacB-like periplasmic core domain SynA1562_01454 PF02687 FtsX-like permease family SynA1562_01454 PF00005 ABC transporter SynA1562_01455 PF01434 Peptidase family M41 SynA1562_01455 PF06480 FtsH Extracellular SynA1562_01455 PF17862 AAA+ lid domain SynA1562_01455 PF00004 ATPase family associated with various cellular activities (AAA) SynA1562_01456 PF00574 Clp protease SynA1562_01457 PF11264 Thylakoid formation protein SynA1562_01460 PF03742 PetN SynA1562_01461 PF02617 ATP-dependent Clp protease adaptor protein ClpS SynA1562_01470 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain SynA1562_01470 PF02222 ATP-grasp domain SynA1562_01471 PF00528 Binding-protein-dependent transport system inner membrane component SynA1562_01472 PF01761 3-dehydroquinate synthase SynA1562_01479 PF02445 Quinolinate synthetase A protein SynA1562_01484 PF04675 DNA ligase N terminus SynA1562_01484 PF04679 ATP dependent DNA ligase C terminal region SynA1562_01484 PF01068 ATP dependent DNA ligase domain SynA1562_01485 PF00271 Helicase conserved C-terminal domain SynA1562_01485 PF08494 DEAD/H associated SynA1562_01485 PF00270 DEAD/DEAH box helicase SynA1562_01501 PF01209 ubiE/COQ5 methyltransferase family SynA1562_01508 PF00005 ABC transporter SynA1562_01511 PF00950 ABC 3 transport family SynA1562_01513 PF00005 ABC transporter SynA1562_01514 PF01297 Zinc-uptake complex component A periplasmic SynA1562_01515 PF00730 HhH-GPD superfamily base excision DNA repair protein SynA1562_01515 PF00633 Helix-hairpin-helix motif SynA1562_01515 PF10576 Iron-sulfur binding domain of endonuclease III SynA1562_01516 PF00111 2Fe-2S iron-sulfur cluster binding domain SynA1562_01538 PF00080 Copper/zinc superoxide dismutase (SODC) SynA1562_01542 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) SynA1562_01544 PF00535 Glycosyl transferase family 2 SynA1562_01549 PF02696 Uncharacterized ACR, YdiU/UPF0061 family SynA1562_01568 PF00067 Cytochrome P450 SynA1562_01573 PF00427 Phycobilisome Linker polypeptide SynA1562_01584 PF03641 Possible lysine decarboxylase SynA1562_01585 PF02562 PhoH-like protein SynA1562_01585 PF13638 PIN domain SynA1562_01639 PF07683 Cobalamin synthesis protein cobW C-terminal domain SynA1562_01639 PF02492 CobW/HypB/UreG, nucleotide-binding domain SynA1562_01647 PF04966 Carbohydrate-selective porin, OprB family SynA1562_01647 PF00395 S-layer homology domain SynA1562_01649 PF13640 2OG-Fe(II) oxygenase superfamily SynA1562_01652 PF00111 2Fe-2S iron-sulfur cluster binding domain SynA1562_01656 PF07992 Pyridine nucleotide-disulphide oxidoreductase SynA1562_01657 PF00258 Flavodoxin SynA1562_01663 PF00471 Ribosomal protein L33 SynA1562_01670 PF00421 Photosystem II protein SynA1562_01671 PF04966 Carbohydrate-selective porin, OprB family SynA1562_01671 PF00395 S-layer homology domain SynA1562_01673 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SynA1562_01684 PF05378 Hydantoinase/oxoprolinase N-terminal region SynA1562_01684 PF01968 Hydantoinase/oxoprolinase SynA1562_01685 PF03773 Predicted permease SynA1562_01690 PF00005 ABC transporter SynA1562_01691 PF00950 ABC 3 transport family SynA1562_01698 PF16363 GDP-mannose 4,6 dehydratase SynA1562_01699 PF16363 GDP-mannose 4,6 dehydratase SynA1562_01700 PF01370 NAD dependent epimerase/dehydratase family SynA1562_01701 PF01370 NAD dependent epimerase/dehydratase family SynA1562_01703 PF14572 Phosphoribosyl synthetase-associated domain SynA1562_01703 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SynA1562_01706 PF14572 Phosphoribosyl synthetase-associated domain SynA1562_01706 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SynA1562_01709 PF01370 NAD dependent epimerase/dehydratase family SynA1562_01710 PF02446 4-alpha-glucanotransferase SynA1562_01711 PF01479 S4 domain SynA1562_01711 PF00849 RNA pseudouridylate synthase SynA1562_01712 PF00989 PAS fold SynA1562_01712 PF00512 His Kinase A (phospho-acceptor) domain SynA1562_01712 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SynA1562_01713 PF00072 Response regulator receiver domain SynA1562_01713 PF00486 Transcriptional regulatory protein, C terminal SynA1562_01715 PF03109 ABC1 family SynA1562_01716 PF01276 Orn/Lys/Arg decarboxylase, major domain SynA1562_01716 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain SynA1562_01717 PF05036 Sporulation related domain SynA1562_01717 PF03330 Lytic transglycolase SynA1562_01720 PF08241 Methyltransferase domain SynA1562_01720 PF12697 Alpha/beta hydrolase family SynA1562_01721 PF00465 Iron-containing alcohol dehydrogenase SynA1562_01722 PF10431 C-terminal, D2-small domain, of ClpB protein SynA1562_01722 PF00004 ATPase family associated with various cellular activities (AAA) SynA1562_01722 PF07724 AAA domain (Cdc48 subfamily) SynA1562_01722 PF17871 AAA lid domain SynA1562_01722 PF02861 Clp amino terminal domain, pathogenicity island component SynA1562_01724 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SynA1562_01724 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SynA1562_01725 PF02457 DisA bacterial checkpoint controller nucleotide-binding SynA1562_01726 PF01255 Putative undecaprenyl diphosphate synthase SynA1562_01727 PF06968 Biotin and Thiamin Synthesis associated domain SynA1562_01727 PF04055 Radical SAM superfamily SynA1562_01731 PF00581 Rhodanese-like domain SynA1562_01731 PF17773 UPF0176 acylphosphatase like domain SynA1562_01734 PF04055 Radical SAM superfamily SynA1562_01735 PF02132 RecR protein SynA1562_01735 PF13662 Toprim domain SynA1562_01738 PF00582 Universal stress protein family SynA1562_01738 PF00999 Sodium/hydrogen exchanger family SynA1562_01739 PF00664 ABC transporter transmembrane region SynA1562_01739 PF00005 ABC transporter SynA1562_01741 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) SynA1562_01745 PF00270 DEAD/DEAH box helicase SynA1562_01745 PF03880 DbpA RNA binding domain SynA1562_01745 PF00271 Helicase conserved C-terminal domain SynA1562_01746 PF01050 Mannose-6-phosphate isomerase SynA1562_01746 PF00483 Nucleotidyl transferase SynA1562_01747 PF13538 UvrD-like helicase C-terminal domain SynA1562_01748 PF12705 PD-(D/E)XK nuclease superfamily SynA1562_01748 PF13361 UvrD-like helicase C-terminal domain SynA1562_01748 PF00580 UvrD/REP helicase N-terminal domain SynA1562_01752 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain SynA1562_01752 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain SynA1562_01752 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain SynA1562_01753 PF01370 NAD dependent epimerase/dehydratase family SynA1562_01756 PF17946 RecC C-terminal domain SynA1562_01757 PF00149 Calcineurin-like phosphoesterase SynA1562_01759 PF10674 Protein of unknown function (DUF2488) SynA1562_01760 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ SynA1562_01763 PF01722 BolA-like protein SynA1562_01764 PF00462 Glutaredoxin SynA1562_01766 PF00072 Response regulator receiver domain SynA1562_01766 PF00486 Transcriptional regulatory protein, C terminal SynA1562_01772 PF02397 Bacterial sugar transferase SynA1562_01780 PF00535 Glycosyl transferase family 2 SynA1562_01781 PF00534 Glycosyl transferases group 1 SynA1562_01781 PF13579 Glycosyl transferase 4-like domain SynA1562_01784 PF13439 Glycosyltransferase Family 4 SynA1562_01784 PF00534 Glycosyl transferases group 1 SynA1562_01785 PF13439 Glycosyltransferase Family 4 SynA1562_01785 PF00534 Glycosyl transferases group 1 SynA1562_01786 PF00534 Glycosyl transferases group 1 SynA1562_01786 PF13477 Glycosyl transferase 4-like SynA1562_01789 PF00664 ABC transporter transmembrane region SynA1562_01789 PF00005 ABC transporter SynA1562_01792 PF13439 Glycosyltransferase Family 4 SynA1562_01792 PF00534 Glycosyl transferases group 1 SynA1562_01793 PF02563 Polysaccharide biosynthesis/export protein SynA1562_01794 PF13614 AAA domain SynA1562_01799 PF01134 Glucose inhibited division protein A SynA1562_01800 PF06298 Photosystem II protein Y (PsbY) SynA1562_01801 PF00132 Bacterial transferase hexapeptide (six repeats) SynA1562_01868 PF03616 Sodium/glutamate symporter SynA1562_01869 PF00196 Bacterial regulatory proteins, luxR family SynA1562_01869 PF00072 Response regulator receiver domain SynA1562_01886 PF00850 Histone deacetylase domain SynA1562_01893 PF00149 Calcineurin-like phosphoesterase SynA1562_01896 PF01475 Ferric uptake regulator family SynA1562_01901 PF09506 Glucosylglycerol-phosphate phosphatase (Salt_tol_Pase) SynA1562_01903 PF00355 Rieske [2Fe-2S] domain SynA1562_01912 PF01053 Cys/Met metabolism PLP-dependent enzyme SynA1562_01913 PF04204 Homoserine O-succinyltransferase SynA1562_01922 PF00005 ABC transporter SynA1562_01923 PF00528 Binding-protein-dependent transport system inner membrane component SynA1562_01924 PF00528 Binding-protein-dependent transport system inner membrane component SynA1562_01925 PF00497 Bacterial extracellular solute-binding proteins, family 3 SynA1562_01927 PF01740 STAS domain SynA1562_01927 PF00916 Sulfate permease family SynA1562_01929 PF01903 CbiX SynA1562_01932 PF05199 GMC oxidoreductase SynA1562_01932 PF00732 GMC oxidoreductase SynA1562_01937 PF11780 Protein of unknown function (DUF3318) SynA1562_01938 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SynA1562_01938 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SynA1562_01938 PF02142 MGS-like domain SynA1562_01940 PF01235 Sodium:alanine symporter family SynA1562_01942 PF00664 ABC transporter transmembrane region SynA1562_01942 PF00005 ABC transporter SynA1562_01944 PF00121 Triosephosphate isomerase SynA1562_01945 PF00809 Pterin binding enzyme SynA1562_01948 PF11965 Domain of unknown function (DUF3479) SynA1562_01948 PF02514 CobN/Magnesium Chelatase SynA1562_01950 PF01113 Dihydrodipicolinate reductase, N-terminus SynA1562_01950 PF05173 Dihydrodipicolinate reductase, C-terminus SynA1562_01952 PF00762 Ferrochelatase SynA1562_01955 PF00156 Phosphoribosyl transferase domain SynA1562_01960 PF00486 Transcriptional regulatory protein, C terminal SynA1562_01960 PF00072 Response regulator receiver domain SynA1562_01962 PF03976 Polyphosphate kinase 2 (PPK2) SynA1562_01967 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SynA1562_01967 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SynA1562_01968 PF01022 Bacterial regulatory protein, arsR family SynA1562_01970 PF00924 Mechanosensitive ion channel SynA1562_01973 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase SynA1562_01975 PF02016 LD-carboxypeptidase N-terminal domain SynA1562_01975 PF17676 LD-carboxypeptidase C-terminal domain SynA1562_01977 PF01116 Fructose-bisphosphate aldolase class-II SynA1562_01978 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SynA1562_01978 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SynA1562_01980 PF01039 Carboxyl transferase domain SynA1562_01980 PF17848 Acetyl-coA carboxylase zinc finger domain SynA1562_01981 PF06750 Bacterial Peptidase A24 N-terminal domain SynA1562_01981 PF01478 Type IV leader peptidase family SynA1562_01983 PF00485 Phosphoribulokinase / Uridine kinase family SynA1562_01984 PF00180 Isocitrate/isopropylmalate dehydrogenase SynA1562_01985 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD SynA1562_01985 PF00132 Bacterial transferase hexapeptide (six repeats) SynA1562_01986 PF01472 PUA domain SynA1562_01986 PF00696 Amino acid kinase family SynA1562_01989 PF03652 Holliday junction resolvase SynA1562_01993 PF12452 Protein of unknown function (DUF3685) SynA1562_01993 PF00072 Response regulator receiver domain SynA1562_01994 PF01475 Ferric uptake regulator family SynA1562_01995 PF00977 Histidine biosynthesis protein SynA1562_01997 PF01066 CDP-alcohol phosphatidyltransferase SynA1562_01998 PF00478 IMP dehydrogenase / GMP reductase domain SynA1562_01998 PF00571 CBS domain SynA1562_02000 PF03734 L,D-transpeptidase catalytic domain SynA1562_02000 PF01476 LysM domain SynA1562_02006 PF00111 2Fe-2S iron-sulfur cluster binding domain SynA1562_02023 PF00027 Cyclic nucleotide-binding domain SynA1562_02023 PF00520 Ion transport protein SynA1562_02025 PF00462 Glutaredoxin SynA1562_02030 PF01593 Flavin containing amine oxidoreductase SynA1562_02039 PF11940 Domain of unknown function (DUF3458) Ig-like fold SynA1562_02039 PF01433 Peptidase family M1 domain SynA1562_02039 PF17432 Domain of unknown function (DUF3458_C) ARM repeats SynA1562_02043 PF07689 KaiB domain SynA1562_02043 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SynA1562_02043 PF00512 His Kinase A (phospho-acceptor) domain SynA1562_02047 PF01383 CpcD/allophycocyanin linker domain SynA1562_02047 PF00175 Oxidoreductase NAD-binding domain SynA1562_02048 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain SynA1562_02048 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain SynA1562_02050 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain SynA1562_02050 PF07685 CobB/CobQ-like glutamine amidotransferase domain SynA1562_02051 PF00708 Acylphosphatase SynA1562_02055 PF13538 UvrD-like helicase C-terminal domain SynA1562_02057 PF00348 Polyprenyl synthetase SynA1562_02059 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain SynA1562_02059 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain SynA1562_02060 PF01966 HD domain SynA1562_02060 PF07697 7TM-HD extracellular SynA1562_02060 PF07698 7TM receptor with intracellular HD hydrolase SynA1562_02061 PF04193 PQ loop repeat SynA1562_02062 PF00849 RNA pseudouridylate synthase SynA1562_02064 PF01910 Thiamine-binding protein SynA1562_02070 PF00528 Binding-protein-dependent transport system inner membrane component SynA1562_02071 PF00682 HMGL-like SynA1562_02071 PF08502 LeuA allosteric (dimerisation) domain SynA1562_02072 PF03065 Glycosyl hydrolase family 57 SynA1562_02072 PF09210 Domain of unknown function (DUF1957) SynA1562_02074 PF03989 DNA gyrase C-terminal domain, beta-propeller SynA1562_02074 PF00521 DNA gyrase/topoisomerase IV, subunit A SynA1562_02075 PF00749 tRNA synthetases class I (E and Q), catalytic domain SynA1562_02075 PF14159 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase SynA1562_02076 PF00478 IMP dehydrogenase / GMP reductase domain SynA1562_02077 PF00085 Thioredoxin SynA1562_02078 PF00117 Glutamine amidotransferase class-I SynA1562_02081 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SynA1562_02082 PF00588 SpoU rRNA Methylase family SynA1562_02085 PF17863 AAA lid domain SynA1562_02085 PF01078 Magnesium chelatase, subunit ChlI SynA1562_02086 PF02075 Crossover junction endodeoxyribonuclease RuvC SynA1562_02087 PF01812 5-formyltetrahydrofolate cyclo-ligase family SynA1562_02089 PF02657 Fe-S metabolism associated domain SynA1562_02090 PF01842 ACT domain SynA1562_02090 PF03447 Homoserine dehydrogenase, NAD binding domain SynA1562_02090 PF00742 Homoserine dehydrogenase SynA1562_02092 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SynA1562_02093 PF00528 Binding-protein-dependent transport system inner membrane component SynA1562_02097 PF06071 Protein of unknown function (DUF933) SynA1562_02097 PF01926 50S ribosome-binding GTPase SynA1562_02098 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SynA1562_02099 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SynA1562_02099 PF01367 5'-3' exonuclease, C-terminal SAM fold SynA1562_02099 PF00476 DNA polymerase family A SynA1562_02099 PF01612 3'-5' exonuclease SynA1562_02100 PF01406 tRNA synthetases class I (C) catalytic domain SynA1562_02100 PF09190 DALR domain SynA1562_02102 PF00209 Sodium:neurotransmitter symporter family SynA1562_02103 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain SynA1562_02103 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase SynA1562_02103 PF13288 DXP reductoisomerase C-terminal domain SynA1562_02105 PF00487 Fatty acid desaturase SynA1562_02107 PF02233 NAD(P) transhydrogenase beta subunit SynA1562_02108 PF01262 Alanine dehydrogenase/PNT, C-terminal domain SynA1562_02108 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch SynA1562_02108 PF05222 Alanine dehydrogenase/PNT, N-terminal domain SynA1562_02109 PF05222 Alanine dehydrogenase/PNT, N-terminal domain SynA1562_02109 PF01262 Alanine dehydrogenase/PNT, C-terminal domain SynA1562_02114 PF07992 Pyridine nucleotide-disulphide oxidoreductase SynA1562_02115 PF01176 Translation initiation factor 1A / IF-1 SynA1562_02117 PF13847 Methyltransferase domain SynA1562_02119 PF13460 NAD(P)H-binding SynA1562_02120 PF08041 PetM family of cytochrome b6f complex subunit 7 SynA1562_02122 PF12697 Alpha/beta hydrolase family SynA1562_02123 PF10369 Small subunit of acetolactate synthase SynA1562_02124 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SynA1562_02125 PF02392 Ycf4 SynA1562_02126 PF00124 Photosynthetic reaction centre protein SynA1562_02127 PF00421 Photosystem II protein SynA1562_02129 PF01053 Cys/Met metabolism PLP-dependent enzyme SynA1562_02130 PF01053 Cys/Met metabolism PLP-dependent enzyme SynA1562_02131 PF00291 Pyridoxal-phosphate dependent enzyme SynA1562_02132 PF02547 Queuosine biosynthesis protein SynA1562_02133 PF02817 e3 binding domain SynA1562_02133 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SynA1562_02133 PF00364 Biotin-requiring enzyme SynA1562_02140 PF00239 Resolvase, N terminal domain SynA1562_02140 PF02796 Helix-turn-helix domain of resolvase SynA1562_02143 PF00501 AMP-binding enzyme SynA1562_02144 PF03099 Biotin/lipoate A/B protein ligase family SynA1562_02145 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein SynA1562_02145 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus SynA1562_02146 PF01791 DeoC/LacD family aldolase SynA1562_02147 PF11967 Recombination protein O N terminal SynA1562_02147 PF02565 Recombination protein O C terminal SynA1562_02149 PF13439 Glycosyltransferase Family 4 SynA1562_02149 PF00534 Glycosyl transferases group 1 SynA1562_02153 PF03079 ARD/ARD' family SynA1562_02154 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SynA1562_02155 PF03807 NADP oxidoreductase coenzyme F420-dependent SynA1562_02155 PF14748 Pyrroline-5-carboxylate reductase dimerisation SynA1562_02156 PF04472 Cell division protein SepF SynA1562_02157 PF01168 Alanine racemase, N-terminal domain SynA1562_02159 PF02361 Cobalt transport protein SynA1562_02160 PF01926 50S ribosome-binding GTPase SynA1562_02160 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal SynA1562_02161 PF17964 Bacterial Ig domain SynA1562_02161 PF03734 L,D-transpeptidase catalytic domain SynA1562_02163 PF01207 Dihydrouridine synthase (Dus) SynA1562_02164 PF00535 Glycosyl transferase family 2 SynA1562_02164 PF00534 Glycosyl transferases group 1 SynA1562_02165 PF00483 Nucleotidyl transferase SynA1562_02166 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase SynA1562_02167 PF04321 RmlD substrate binding domain SynA1562_02168 PF16363 GDP-mannose 4,6 dehydratase SynA1562_02169 PF05045 Rhamnan synthesis protein F SynA1562_02169 PF14307 Glycosyltransferase WbsX SynA1562_02174 PF00206 Lyase SynA1562_02174 PF10415 Fumarase C C-terminus SynA1562_02175 PF00270 DEAD/DEAH box helicase SynA1562_02175 PF00271 Helicase conserved C-terminal domain SynA1562_02175 PF08148 DSHCT (NUC185) domain SynA1562_02183 PF01758 Sodium Bile acid symporter family SynA1562_02184 PF00155 Aminotransferase class I and II SynA1562_02190 PF00202 Aminotransferase class-III SynA1562_02193 PF02527 rRNA small subunit methyltransferase G SynA1562_02201 PF04055 Radical SAM superfamily SynA1562_02202 PF00762 Ferrochelatase SynA1562_02203 PF04983 RNA polymerase Rpb1, domain 3 SynA1562_02203 PF05000 RNA polymerase Rpb1, domain 4 SynA1562_02203 PF04998 RNA polymerase Rpb1, domain 5 SynA1562_02204 PF00623 RNA polymerase Rpb1, domain 2 SynA1562_02204 PF04983 RNA polymerase Rpb1, domain 3 SynA1562_02204 PF04997 RNA polymerase Rpb1, domain 1 SynA1562_02205 PF04561 RNA polymerase Rpb2, domain 2 SynA1562_02205 PF00562 RNA polymerase Rpb2, domain 6 SynA1562_02205 PF04560 RNA polymerase Rpb2, domain 7 SynA1562_02205 PF04563 RNA polymerase beta subunit SynA1562_02205 PF10385 RNA polymerase beta subunit external 1 domain SynA1562_02205 PF04565 RNA polymerase Rpb2, domain 3 SynA1562_02206 PF01026 TatD related DNase SynA1562_02207 PF01649 Ribosomal protein S20 SynA1562_02208 PF00815 Histidinol dehydrogenase SynA1562_02209 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) SynA1562_02210 PF13180 PDZ domain SynA1562_02214 PF04055 Radical SAM superfamily SynA1562_02217 PF02576 RimP N-terminal domain SynA1562_02218 PF13184 NusA-like KH domain SynA1562_02218 PF08529 NusA N-terminal domain SynA1562_02218 PF00575 S1 RNA binding domain SynA1562_02220 PF11987 Translation-initiation factor 2 SynA1562_02220 PF04760 Translation initiation factor IF-2, N-terminal region SynA1562_02220 PF00009 Elongation factor Tu GTP binding domain SynA1562_02227 PF00890 FAD binding domain SynA1562_02227 PF02910 Fumarate reductase flavoprotein C-term SynA1562_02233 PF00749 tRNA synthetases class I (E and Q), catalytic domain SynA1562_02235 PF00216 Bacterial DNA-binding protein SynA1562_02237 PF00128 Alpha amylase, catalytic domain SynA1562_02237 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SynA1562_02240 PF02405 Permease MlaE SynA1562_02243 PF02660 Glycerol-3-phosphate acyltransferase SynA1562_02244 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SynA1562_02246 PF00579 tRNA synthetases class I (W and Y) SynA1562_02249 PF00196 Bacterial regulatory proteins, luxR family SynA1562_02249 PF00072 Response regulator receiver domain SynA1562_02253 PF02789 Cytosol aminopeptidase family, N-terminal domain SynA1562_02253 PF00883 Cytosol aminopeptidase family, catalytic domain SynA1562_02263 PF01625 Peptide methionine sulfoxide reductase SynA1562_02264 PF02684 Lipid-A-disaccharide synthetase SynA1562_02265 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 SynA1562_02265 PF00132 Bacterial transferase hexapeptide (six repeats) SynA1562_02266 PF07977 FabA-like domain SynA1562_02267 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase SynA1562_02269 PF01259 SAICAR synthetase SynA1562_02271 PF02844 Phosphoribosylglycinamide synthetase, N domain SynA1562_02271 PF02843 Phosphoribosylglycinamide synthetase, C domain SynA1562_02271 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain SynA1562_02272 PF00512 His Kinase A (phospho-acceptor) domain SynA1562_02272 PF00672 HAMP domain SynA1562_02272 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SynA1562_02272 PF00989 PAS fold SynA1562_02273 PF06745 KaiC SynA1562_02274 PF07689 KaiB domain SynA1562_02275 PF07688 KaiA C-terminal domain SynA1562_02276 PF00829 Ribosomal prokaryotic L21 protein SynA1562_02277 PF01016 Ribosomal L27 protein SynA1562_02279 PF16198 tRNA pseudouridylate synthase B C-terminal domain SynA1562_02279 PF01509 TruB family pseudouridylate synthase (N terminal domain) SynA1562_02280 PF01709 Transcriptional regulator SynA1562_02283 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SynA1562_02284 PF04122 Putative cell wall binding repeat 2 SynA1562_02284 PF08486 Stage II sporulation protein SynA1562_02285 PF12706 Beta-lactamase superfamily domain SynA1562_02286 PF14495 Cytochrome c-550 domain SynA1562_02288 PF00111 2Fe-2S iron-sulfur cluster binding domain SynA1562_02290 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SynA1562_02290 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SynA1562_02290 PF01842 ACT domain SynA1562_02294 PF08245 Mur ligase middle domain SynA1562_02294 PF02875 Mur ligase family, glutamate ligase domain SynA1562_02300 PF01192 RNA polymerase Rpb6 SynA1562_02302 PF00012 Hsp70 protein SynA1562_02305 PF00156 Phosphoribosyl transferase domain SynA1562_02306 PF01676 Metalloenzyme superfamily SynA1562_02306 PF06415 BPG-independent PGAM N-terminus (iPGM_N) SynA1562_02312 PF00118 TCP-1/cpn60 chaperonin family SynA1562_02313 PF00166 Chaperonin 10 Kd subunit SynA1562_02314 PF02874 ATP synthase alpha/beta family, beta-barrel domain SynA1562_02314 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SynA1562_02315 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain SynA1562_02315 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain SynA1562_02317 PF04839 Plastid and cyanobacterial ribosomal protein (PSRP-3 / Ycf65) SynA1562_02319 PF01699 Sodium/calcium exchanger protein SynA1562_02320 PF00557 Metallopeptidase family M24 SynA1562_02320 PF05195 Aminopeptidase P, N-terminal domain SynA1562_02321 PF01595 Cyclin M transmembrane N-terminal domain SynA1562_02321 PF00571 CBS domain SynA1562_02322 PF10396 GTP-binding protein TrmE N-terminus SynA1562_02322 PF12631 MnmE helical domain SynA1562_02322 PF01926 50S ribosome-binding GTPase SynA1562_02323 PF01467 Cytidylyltransferase-like SynA1562_02324 PF02540 NAD synthase SynA1562_02324 PF00795 Carbon-nitrogen hydrolase SynA1562_02325 PF01262 Alanine dehydrogenase/PNT, C-terminal domain SynA1562_02325 PF05222 Alanine dehydrogenase/PNT, N-terminal domain SynA1562_02326 PF02810 SEC-C motif SynA1562_02327 PF11805 Protein of unknown function (DUF3326) SynA1562_02329 PF00111 2Fe-2S iron-sulfur cluster binding domain SynA1562_02331 PF00231 ATP synthase SynA1562_02332 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SynA1562_02332 PF00306 ATP synthase alpha/beta chain, C terminal domain SynA1562_02332 PF02874 ATP synthase alpha/beta family, beta-barrel domain SynA1562_02333 PF00213 ATP synthase delta (OSCP) subunit SynA1562_02334 PF00430 ATP synthase B/B' CF(0) SynA1562_02335 PF00430 ATP synthase B/B' CF(0) SynA1562_02336 PF00137 ATP synthase subunit C SynA1562_02337 PF00119 ATP synthase A chain SynA1562_02339 PF13847 Methyltransferase domain SynA1562_02340 PF00502 Phycobilisome protein SynA1562_02340 PF00427 Phycobilisome Linker polypeptide SynA1562_02341 PF00502 Phycobilisome protein SynA1562_02342 PF00502 Phycobilisome protein SynA1562_02343 PF01383 CpcD/allophycocyanin linker domain SynA1562_02344 PF01728 FtsJ-like methyltransferase SynA1562_02344 PF01479 S4 domain SynA1562_02346 PF01098 Cell cycle protein SynA1562_02348 PF05140 ResB-like family SynA1562_02349 PF14489 QueF-like protein SynA1562_02350 PF00543 Nitrogen regulatory protein P-II SynA1562_02352 PF10397 Adenylosuccinate lyase C-terminus SynA1562_02352 PF00206 Lyase SynA1562_02355 PF00550 Phosphopantetheine attachment site SynA1562_02356 PF00109 Beta-ketoacyl synthase, N-terminal domain SynA1562_02356 PF02801 Beta-ketoacyl synthase, C-terminal domain SynA1562_02357 PF05159 Capsule polysaccharide biosynthesis protein SynA1562_02358 PF05159 Capsule polysaccharide biosynthesis protein SynA1562_02359 PF02348 Cytidylyltransferase SynA1562_02363 PF03102 NeuB family SynA1562_02363 PF08666 SAF domain SynA1562_02377 PF01661 Macro domain SynA1562_02385 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SynA1562_02396 PF02899 Phage integrase, N-terminal SAM-like domain SynA1562_02396 PF00589 Phage integrase family SynA1562_02397 PF02926 THUMP domain SynA1562_02397 PF01170 Putative RNA methylase family UPF0020 SynA1562_02402 PF06470 SMC proteins Flexible Hinge Domain SynA1562_02402 PF02463 RecF/RecN/SMC N terminal domain SynA1562_02404 PF01641 SelR domain SynA1562_02405 PF02684 Lipid-A-disaccharide synthetase SynA1562_02408 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SynA1562_02408 PF00289 Biotin carboxylase, N-terminal domain SynA1562_02408 PF02785 Biotin carboxylase C-terminal domain SynA1562_02410 PF06596 Photosystem II reaction centre X protein (PsbX) SynA1562_02411 PF07444 Ycf66 protein N-terminus SynA1562_02414 PF00762 Ferrochelatase SynA1562_02415 PF00005 ABC transporter SynA1562_02415 PF06472 ABC transporter transmembrane region 2 SynA1562_02416 PF01230 HIT domain SynA1562_02417 PF13335 Magnesium chelatase, subunit ChlI C-terminal SynA1562_02417 PF01078 Magnesium chelatase, subunit ChlI SynA1562_02418 PF01078 Magnesium chelatase, subunit ChlI SynA1562_02418 PF13335 Magnesium chelatase, subunit ChlI C-terminal SynA1562_02419 PF13335 Magnesium chelatase, subunit ChlI C-terminal SynA1562_02419 PF01078 Magnesium chelatase, subunit ChlI SynA1562_02423 PF01327 Polypeptide deformylase SynA1562_02426 PF01741 Large-conductance mechanosensitive channel, MscL SynA1562_02428 PF00266 Aminotransferase class-V SynA1562_02429 PF01458 Uncharacterized protein family (UPF0051) SynA1562_02430 PF00005 ABC transporter SynA1562_02431 PF01458 Uncharacterized protein family (UPF0051) SynA1562_02432 PF02943 Ferredoxin thioredoxin reductase catalytic beta chain SynA1562_02435 PF09367 CpeS-like protein SynA1562_02436 PF00427 Phycobilisome Linker polypeptide SynA1562_02442 PF13847 Methyltransferase domain SynA1562_02447 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SynA1562_02447 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SynA1562_02447 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SynA1562_02447 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SynA1562_02453 PF00873 AcrB/AcrD/AcrF family SynA1562_02455 PF05496 Holliday junction DNA helicase RuvB P-loop domain SynA1562_02455 PF12002 MgsA AAA+ ATPase C terminal SynA1562_02455 PF16193 AAA C-terminal domain SynA1562_02458 PF00578 AhpC/TSA family SynA1562_02459 PF03309 Type III pantothenate kinase SynA1562_02460 PF01507 Phosphoadenosine phosphosulfate reductase family SynA1562_02461 PF07992 Pyridine nucleotide-disulphide oxidoreductase SynA1562_02462 PF13167 GTP-binding GTPase N-terminal SynA1562_02462 PF01926 50S ribosome-binding GTPase SynA1562_02462 PF16360 GTP-binding GTPase Middle Region SynA1562_02463 PF03600 Citrate transporter SynA1562_02463 PF02080 TrkA-C domain SynA1562_02464 PF02386 Cation transport protein SynA1562_02465 PF02080 TrkA-C domain SynA1562_02465 PF02254 TrkA-N domain SynA1562_02466 PF03702 Anhydro-N-acetylmuramic acid kinase SynA1562_02471 PF12848 ABC transporter SynA1562_02471 PF16326 ABC transporter C-terminal domain SynA1562_02471 PF00005 ABC transporter SynA1562_02473 PF13180 PDZ domain SynA1562_02476 PF00271 Helicase conserved C-terminal domain SynA1562_02476 PF04408 Helicase associated domain (HA2) SynA1562_02476 PF00270 DEAD/DEAH box helicase SynA1562_02476 PF08482 ATP-dependent helicase C-terminal SynA1562_02479 PF02601 Exonuclease VII, large subunit SynA1562_02479 PF13742 OB-fold nucleic acid binding domain SynA1562_02490 PF00459 Inositol monophosphatase family SynA1562_02493 PF02673 Bacitracin resistance protein BacA SynA1562_02495 PF06514 Photosystem II 12 kDa extrinsic protein (PsbU) SynA1562_02496 PF02910 Fumarate reductase flavoprotein C-term SynA1562_02496 PF00890 FAD binding domain SynA1562_02497 PF07884 Vitamin K epoxide reductase family SynA1562_02498 PF00919 Uncharacterized protein family UPF0004 SynA1562_02498 PF18693 TRAM domain SynA1562_02498 PF04055 Radical SAM superfamily SynA1562_02499 PF07690 Major Facilitator Superfamily SynA1562_02501 PF07690 Major Facilitator Superfamily SynA1562_02502 PF13282 Domain of unknown function (DUF4070) SynA1562_02502 PF02310 B12 binding domain SynA1562_02502 PF04055 Radical SAM superfamily SynA1562_02503 PF14251 Domain of unknown function (DUF4346) SynA1562_02507 PF01202 Shikimate kinase SynA1562_02512 PF02033 Ribosome-binding factor A SynA1562_02513 PF00933 Glycosyl hydrolase family 3 N terminal domain SynA1562_02514 PF13181 Tetratricopeptide repeat SynA1562_02514 PF00535 Glycosyl transferase family 2 SynA1562_02515 PF02602 Uroporphyrinogen-III synthase HemD SynA1562_02518 PF01593 Flavin containing amine oxidoreductase SynA1562_02519 PF01521 Iron-sulphur cluster biosynthesis SynA1562_02523 PF01370 NAD dependent epimerase/dehydratase family SynA1562_02523 PF08338 Domain of unknown function (DUF1731) SynA1562_02524 PF11910 Cyanobacterial and plant NDH-1 subunit O SynA1562_02526 PF00226 DnaJ domain SynA1562_02526 PF01556 DnaJ C terminal domain SynA1562_02526 PF00684 DnaJ central domain SynA1562_02527 PF00291 Pyridoxal-phosphate dependent enzyme SynA1562_02528 PF04966 Carbohydrate-selective porin, OprB family SynA1562_02528 PF00395 S-layer homology domain SynA1562_02529 PF04966 Carbohydrate-selective porin, OprB family SynA1562_02529 PF00395 S-layer homology domain SynA1562_02532 PF00535 Glycosyl transferase family 2 SynA1562_02537 PF00124 Photosynthetic reaction centre protein SynA1562_02539 PF00005 ABC transporter SynA1562_02541 PF00072 Response regulator receiver domain SynA1562_02541 PF00486 Transcriptional regulatory protein, C terminal SynA1562_02542 PF09115 DNA polymerase III, delta subunit, C terminal SynA1562_02543 PF02223 Thymidylate kinase SynA1562_02544 PF00403 Heavy-metal-associated domain SynA1562_02546 PF06745 KaiC SynA1562_02546 PF18073 Rubredoxin metal binding domain SynA1562_02547 PF00072 Response regulator receiver domain SynA1562_02547 PF00486 Transcriptional regulatory protein, C terminal SynA1562_02548 PF02504 Fatty acid synthesis protein SynA1562_02549 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SynA1562_02549 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SynA1562_02550 PF00698 Acyl transferase domain SynA1562_02551 PF00501 AMP-binding enzyme SynA1562_02551 PF01553 Acyltransferase SynA1562_02551 PF13193 AMP-binding enzyme C-terminal domain SynA1562_02553 PF00814 Glycoprotease family SynA1562_02555 PF01743 Poly A polymerase head domain SynA1562_02556 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) SynA1562_02558 PF01593 Flavin containing amine oxidoreductase SynA1562_02559 PF10664 Cyanobacterial and plastid NDH-1 subunit M SynA1562_02561 PF03466 LysR substrate binding domain SynA1562_02561 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SynA1562_02563 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus SynA1562_02563 PF00361 Proton-conducting membrane transporter SynA1562_02563 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus SynA1562_02564 PF00361 Proton-conducting membrane transporter SynA1562_02567 PF00483 Nucleotidyl transferase SynA1562_02569 PF00072 Response regulator receiver domain SynA1562_02569 PF00196 Bacterial regulatory proteins, luxR family SynA1562_02572 PF01513 ATP-NAD kinase SynA1562_02573 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L SynA1562_02574 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 SynA1562_02575 PF13237 4Fe-4S dicluster domain SynA1562_02576 PF00146 NADH dehydrogenase SynA1562_02577 PF00285 Citrate synthase, C-terminal domain SynA1562_02580 PF00581 Rhodanese-like domain SynA1562_02580 PF17773 UPF0176 acylphosphatase like domain SynA1562_02581 PF01628 HrcA protein C terminal domain SynA1562_02582 PF01628 HrcA protein C terminal domain SynA1562_02583 PF00291 Pyridoxal-phosphate dependent enzyme SynA1562_02584 PF01253 Translation initiation factor SUI1 SynA1562_02586 PF01594 AI-2E family transporter SynA1562_02588 PF00731 AIR carboxylase SynA1562_02590 PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus SynA1562_02591 PF00849 RNA pseudouridylate synthase SynA1562_02592 PF00072 Response regulator receiver domain SynA1562_02592 PF00486 Transcriptional regulatory protein, C terminal SynA1562_02594 PF00266 Aminotransferase class-V SynA1562_02597 PF01795 MraW methylase family SynA1562_02598 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit SynA1562_02602 PF13193 AMP-binding enzyme C-terminal domain SynA1562_02602 PF00501 AMP-binding enzyme SynA1562_02603 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain SynA1562_02603 PF13378 Enolase C-terminal domain-like SynA1562_02604 PF01040 UbiA prenyltransferase family SynA1562_02605 PF00425 chorismate binding enzyme SynA1562_02606 PF02951 Prokaryotic glutathione synthetase, N-terminal domain SynA1562_02606 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain SynA1562_02607 PF00462 Glutaredoxin SynA1562_02608 PF03462 PCRF domain SynA1562_02608 PF00472 RF-1 domain SynA1562_02610 PF02130 Uncharacterized protein family UPF0054 SynA1562_02611 PF01219 Prokaryotic diacylglycerol kinase SynA1562_02612 PF00117 Glutamine amidotransferase class-I SynA1562_02615 PF17763 Glutaminase/Asparaginase C-terminal domain SynA1562_02615 PF00710 Asparaginase, N-terminal SynA1562_02616 PF00155 Aminotransferase class I and II SynA1562_02617 PF00750 tRNA synthetases class I (R) SynA1562_02617 PF05746 DALR anticodon binding domain SynA1562_02617 PF03485 Arginyl tRNA synthetase N terminal domain SynA1562_02618 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain SynA1562_02618 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain SynA1562_02619 PF10396 GTP-binding protein TrmE N-terminus SynA1562_02619 PF12631 MnmE helical domain SynA1562_02619 PF01926 50S ribosome-binding GTPase SynA1562_02621 PF02824 TGS domain SynA1562_02621 PF04607 Region found in RelA / SpoT proteins SynA1562_02621 PF13291 ACT domain SynA1562_02622 PF00005 ABC transporter SynA1562_02622 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SynA1562_02623 PF01479 S4 domain SynA1562_02623 PF00849 RNA pseudouridylate synthase SynA1562_02624 PF01926 50S ribosome-binding GTPase SynA1562_02625 PF00162 Phosphoglycerate kinase SynA1562_02627 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase SynA1562_02627 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SynA1562_02629 PF03033 Glycosyltransferase family 28 N-terminal domain SynA1562_02629 PF04101 Glycosyltransferase family 28 C-terminal domain SynA1562_02630 PF00155 Aminotransferase class I and II SynA1562_02632 PF01180 Dihydroorotate dehydrogenase SynA1562_02633 PF00075 RNase H SynA1562_02635 PF00542 Ribosomal protein L7/L12 C-terminal domain SynA1562_02635 PF16320 Ribosomal protein L7/L12 dimerisation domain SynA1562_02636 PF00466 Ribosomal protein L10 SynA1562_02637 PF00687 Ribosomal protein L1p/L10e family SynA1562_02638 PF03946 Ribosomal protein L11, N-terminal domain SynA1562_02638 PF00298 Ribosomal protein L11, RNA binding domain SynA1562_02639 PF02357 Transcription termination factor nusG SynA1562_02639 PF00467 KOW motif SynA1562_02640 PF00584 SecE/Sec61-gamma subunits of protein translocation complex SynA1562_02641 PF17871 AAA lid domain SynA1562_02641 PF00004 ATPase family associated with various cellular activities (AAA) SynA1562_02641 PF07724 AAA domain (Cdc48 subfamily) SynA1562_02641 PF02861 Clp amino terminal domain, pathogenicity island component SynA1562_02641 PF10431 C-terminal, D2-small domain, of ClpB protein SynA1562_02642 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SynA1562_02643 PF03952 Enolase, N-terminal domain SynA1562_02643 PF00113 Enolase, C-terminal TIM barrel domain SynA1562_02644 PF03109 ABC1 family SynA1562_02652 PF00239 Resolvase, N terminal domain SynA1562_02652 PF02796 Helix-turn-helix domain of resolvase SynA1562_02655 PF01757 Acyltransferase family SynA1562_02658 PF01960 ArgJ family SynA1562_02660 PF01121 Dephospho-CoA kinase SynA1562_02662 PF02637 GatB domain SynA1562_02662 PF02934 GatB/GatE catalytic domain SynA1562_02663 PF01266 FAD dependent oxidoreductase SynA1562_02663 PF05690 Thiazole biosynthesis protein ThiG SynA1562_02664 PF00334 Nucleoside diphosphate kinase SynA1562_02665 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SynA1562_02665 PF17810 Arginine decarboxylase helical bundle domain SynA1562_02665 PF17944 Arginine decarboxylase C-terminal helical extension SynA1562_02668 PF02142 MGS-like domain SynA1562_02671 PF01411 tRNA synthetases class II (A) SynA1562_02671 PF02272 DHHA1 domain SynA1562_02671 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SynA1562_02673 PF00176 SNF2 family N-terminal domain SynA1562_02673 PF00271 Helicase conserved C-terminal domain SynA1562_02673 PF12419 SNF2 Helicase protein SynA1562_02677 PF00011 Hsp20/alpha crystallin family SynA1562_02679 PF00753 Metallo-beta-lactamase superfamily SynA1562_02679 PF01613 Flavin reductase like domain SynA1562_02681 PF00258 Flavodoxin SynA1562_02681 PF01613 Flavin reductase like domain SynA1562_02682 PF00301 Rubredoxin SynA1562_02686 PF02347 Glycine cleavage system P-protein SynA1562_02687 PF01597 Glycine cleavage H-protein SynA1562_02688 PF06838 Methionine gamma-lyase SynA1562_02690 PF01281 Ribosomal protein L9, N-terminal domain SynA1562_02690 PF03948 Ribosomal protein L9, C-terminal domain SynA1562_02691 PF03796 DnaB-like helicase C terminal domain SynA1562_02691 PF03796 DnaB-like helicase C terminal domain SynA1562_02691 PF14528 LAGLIDADG-like domain SynA1562_02691 PF00772 DnaB-like helicase N terminal domain SynA1562_02691 PF14528 LAGLIDADG-like domain SynA1562_02691 PF00772 DnaB-like helicase N terminal domain SynA1562_02694 PF13932 GidA associated domain SynA1562_02694 PF01134 Glucose inhibited division protein A SynA1562_02701 PF12826 Helix-hairpin-helix motif SynA1562_02701 PF03119 NAD-dependent DNA ligase C4 zinc finger domain SynA1562_02701 PF01653 NAD-dependent DNA ligase adenylation domain SynA1562_02701 PF00533 BRCA1 C Terminus (BRCT) domain SynA1562_02701 PF03120 NAD-dependent DNA ligase OB-fold domain SynA1562_02703 PF09335 SNARE associated Golgi protein SynA1562_02706 PF00005 ABC transporter SynA1562_02707 PF00924 Mechanosensitive ion channel SynA1562_02708 PF10458 Valyl tRNA synthetase tRNA binding arm SynA1562_02708 PF00133 tRNA synthetases class I (I, L, M and V) SynA1562_02708 PF08264 Anticodon-binding domain of tRNA SynA1562_02714 PF00106 short chain dehydrogenase SynA1562_02726 PF03819 MazG nucleotide pyrophosphohydrolase domain SynA1562_02727 PF00472 RF-1 domain SynA1562_02727 PF03462 PCRF domain SynA1562_02728 PF17284 Spermidine synthase tetramerisation domain SynA1562_02729 PF00491 Arginase family SynA1562_02732 PF01571 Aminomethyltransferase folate-binding domain SynA1562_02732 PF08669 Glycine cleavage T-protein C-terminal barrel domain SynA1562_02733 PF01336 OB-fold nucleic acid binding domain SynA1562_02733 PF02938 GAD domain SynA1562_02733 PF00152 tRNA synthetases class II (D, K and N) SynA1562_02734 PF00140 Sigma-70 factor, region 1.2 SynA1562_02734 PF04542 Sigma-70 region 2 SynA1562_02734 PF04545 Sigma-70, region 4 SynA1562_02734 PF04539 Sigma-70 region 3 SynA1562_02735 PF00210 Ferritin-like domain SynA1562_02736 PF00117 Glutamine amidotransferase class-I SynA1562_02736 PF06418 CTP synthase N-terminus SynA1562_02737 PF04055 Radical SAM superfamily SynA1562_02738 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase SynA1562_02738 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SynA1562_02739 PF06508 Queuosine biosynthesis protein QueC SynA1562_02740 PF00425 chorismate binding enzyme SynA1562_02740 PF04715 Anthranilate synthase component I, N terminal region SynA1562_02743 PF00128 Alpha amylase, catalytic domain SynA1562_02744 PF00535 Glycosyl transferase family 2 SynA1562_02748 PF00005 ABC transporter SynA1562_02749 PF00005 ABC transporter SynA1562_02749 PF12399 Branched-chain amino acid ATP-binding cassette transporter SynA1562_02751 PF02653 Branched-chain amino acid transport system / permease component SynA1562_02752 PF13458 Periplasmic binding protein SynA1562_02753 PF02492 CobW/HypB/UreG, nucleotide-binding domain SynA1562_02754 PF01730 UreF SynA1562_02755 PF02814 UreE urease accessory protein, N-terminal domain SynA1562_02755 PF05194 UreE urease accessory protein, C-terminal domain SynA1562_02756 PF01774 UreD urease accessory protein SynA1562_02757 PF00547 Urease, gamma subunit SynA1562_02758 PF00699 Urease beta subunit SynA1562_02759 PF01979 Amidohydrolase family SynA1562_02759 PF00449 Urease alpha-subunit, N-terminal domain SynA1562_02760 PF00117 Glutamine amidotransferase class-I SynA1562_02764 PF01546 Peptidase family M20/M25/M40 SynA1562_02765 PF13537 Glutamine amidotransferase domain SynA1562_02765 PF00733 Asparagine synthase SynA1562_02766 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SynA1562_02766 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SynA1562_02769 PF00474 Sodium:solute symporter family SynA1562_02771 PF14403 Circularly permuted ATP-grasp type 2 SynA1562_02775 PF04055 Radical SAM superfamily SynA1562_02775 PF06463 Molybdenum Cofactor Synthesis C SynA1562_02776 PF12804 MobA-like NTP transferase domain SynA1562_02778 PF07690 Major Facilitator Superfamily SynA1562_02779 PF01568 Molydopterin dinucleotide binding domain SynA1562_02779 PF00384 Molybdopterin oxidoreductase SynA1562_02779 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SynA1562_02783 PF00484 Carbonic anhydrase SynA1562_02784 PF01967 MoaC family SynA1562_02785 PF03453 MoeA N-terminal region (domain I and II) SynA1562_02785 PF03454 MoeA C-terminal region (domain IV) SynA1562_02785 PF00994 Probable molybdopterin binding domain SynA1562_02788 PF02391 MoaE protein SynA1562_02790 PF00994 Probable molybdopterin binding domain SynA1562_02791 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SynA1562_02794 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain SynA1562_02794 PF01077 Nitrite and sulphite reductase 4Fe-4S domain SynA1562_02796 PF01226 Formate/nitrite transporter SynA1562_02798 PF02560 Cyanate lyase C-terminal domain SynA1562_02800 PF02885 Glycosyl transferase family, helical bundle domain SynA1562_02800 PF00591 Glycosyl transferase family, a/b domain SynA1562_02802 PF07690 Major Facilitator Superfamily SynA1562_02803 PF13089 Polyphosphate kinase N-terminal domain SynA1562_02803 PF13090 Polyphosphate kinase C-terminal domain 2 SynA1562_02803 PF02503 Polyphosphate kinase middle domain SynA1562_02803 PF17941 Polyphosphate kinase C-terminal domain 1 SynA1562_02805 PF04545 Sigma-70, region 4 SynA1562_02805 PF04539 Sigma-70 region 3 SynA1562_02805 PF04542 Sigma-70 region 2 SynA1562_02805 PF00140 Sigma-70 factor, region 1.2 SynA1562_02807 PF00793 DAHP synthetase I family SynA1562_02808 PF00330 Aconitase family (aconitate hydratase) SynA1562_02808 PF06434 Aconitate hydratase 2 N-terminus SynA1562_02808 PF11791 Aconitate B N-terminal domain SynA1562_02809 PF00654 Voltage gated chloride channel SynA1562_02810 PF04055 Radical SAM superfamily SynA1562_02810 PF01938 TRAM domain SynA1562_02810 PF00919 Uncharacterized protein family UPF0004 SynA1562_02812 PF00551 Formyl transferase SynA1562_02812 PF01842 ACT domain SynA1562_02814 PF01266 FAD dependent oxidoreductase SynA1562_02817 PF00012 Hsp70 protein SynA1562_02818 PF08501 Shikimate dehydrogenase substrate binding domain SynA1562_02818 PF18317 Shikimate 5'-dehydrogenase C-terminal domain SynA1562_02818 PF01488 Shikimate / quinate 5-dehydrogenase SynA1562_02820 PF01250 Ribosomal protein S6 SynA1562_02822 PF00764 Arginosuccinate synthase SynA1562_02825 PF00953 Glycosyl transferase family 4 SynA1562_02825 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 SynA1562_02831 PF03734 L,D-transpeptidase catalytic domain SynA1562_02831 PF01476 LysM domain SynA1562_02832 PF02222 ATP-grasp domain SynA1562_02833 PF00862 Sucrose synthase SynA1562_02833 PF00534 Glycosyl transferases group 1 SynA1562_02836 PF17760 UvrA interaction domain SynA1562_02836 PF17755 UvrA DNA-binding domain SynA1562_02837 PF02463 RecF/RecN/SMC N terminal domain SynA1562_02838 PF03109 ABC1 family SynA1562_02840 PF00291 Pyridoxal-phosphate dependent enzyme SynA1562_50010 PF00849 RNA pseudouridylate synthase