locus-tag class description SynBIOSU31_00001 PF02768 DNA polymerase III beta subunit, C-terminal domain SynBIOSU31_00001 PF02767 DNA polymerase III beta subunit, central domain SynBIOSU31_00001 PF00712 DNA polymerase III beta subunit, N-terminal domain SynBIOSU31_00003 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain SynBIOSU31_00003 PF02769 AIR synthase related protein, C-terminal domain SynBIOSU31_00003 PF00586 AIR synthase related protein, N-terminal domain SynBIOSU31_00004 PF00156 Phosphoribosyl transferase domain SynBIOSU31_00005 PF03989 DNA gyrase C-terminal domain, beta-propeller SynBIOSU31_00005 PF00521 DNA gyrase/topoisomerase IV, subunit A SynBIOSU31_00007 PF08331 Domain of unknown function (DUF1730) SynBIOSU31_00010 PF01029 NusB family SynBIOSU31_00011 PF02881 SRP54-type protein, helical bundle domain SynBIOSU31_00011 PF00448 SRP54-type protein, GTPase domain SynBIOSU31_00013 PF07228 Stage II sporulation protein E (SpoIIE) SynBIOSU31_00013 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain SynBIOSU31_00014 PF14698 Argininosuccinate lyase C-terminal SynBIOSU31_00014 PF00206 Lyase SynBIOSU31_00015 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) SynBIOSU31_00016 PF01207 Dihydrouridine synthase (Dus) SynBIOSU31_00017 PF01641 SelR domain SynBIOSU31_00019 PF00482 Type II secretion system (T2SS), protein F SynBIOSU31_00020 PF00437 Type II/IV secretion system protein SynBIOSU31_00021 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain SynBIOSU31_00021 PF00437 Type II/IV secretion system protein SynBIOSU31_00022 PF01025 GrpE SynBIOSU31_00023 PF00226 DnaJ domain SynBIOSU31_00023 PF01556 DnaJ C terminal domain SynBIOSU31_00023 PF00684 DnaJ central domain SynBIOSU31_00025 PF03193 RsgA GTPase SynBIOSU31_00026 PF02575 YbaB/EbfC DNA-binding family SynBIOSU31_00027 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain SynBIOSU31_00027 PF01565 FAD binding domain SynBIOSU31_00028 PF01225 Mur ligase family, catalytic domain SynBIOSU31_00028 PF02875 Mur ligase family, glutamate ligase domain SynBIOSU31_00028 PF08245 Mur ligase middle domain SynBIOSU31_00030 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SynBIOSU31_00030 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SynBIOSU31_00031 PF00586 AIR synthase related protein, N-terminal domain SynBIOSU31_00031 PF02769 AIR synthase related protein, C-terminal domain SynBIOSU31_00032 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SynBIOSU31_00034 PF09285 Elongation factor P, C-terminal SynBIOSU31_00034 PF08207 Elongation factor P (EF-P) KOW-like domain SynBIOSU31_00034 PF01132 Elongation factor P (EF-P) OB domain SynBIOSU31_00035 PF00364 Biotin-requiring enzyme SynBIOSU31_00036 PF04166 Pyridoxal phosphate biosynthetic protein PdxA SynBIOSU31_00040 PF04434 SWIM zinc finger SynBIOSU31_00040 PF00271 Helicase conserved C-terminal domain SynBIOSU31_00040 PF00176 SNF2 family N-terminal domain SynBIOSU31_00047 PF00266 Aminotransferase class-V SynBIOSU31_00048 PF01888 CbiD SynBIOSU31_00049 PF00117 Glutamine amidotransferase class-I SynBIOSU31_00049 PF00958 GMP synthase C terminal domain SynBIOSU31_00059 PF02796 Helix-turn-helix domain of resolvase SynBIOSU31_00059 PF00239 Resolvase, N terminal domain SynBIOSU31_00063 PF03793 PASTA domain SynBIOSU31_00063 PF00905 Penicillin binding protein transpeptidase domain SynBIOSU31_00063 PF03717 Penicillin-binding Protein dimerisation domain SynBIOSU31_00064 PF13439 Glycosyltransferase Family 4 SynBIOSU31_00064 PF00534 Glycosyl transferases group 1 SynBIOSU31_00065 PF16363 GDP-mannose 4,6 dehydratase SynBIOSU31_00067 PF05690 Thiazole biosynthesis protein ThiG SynBIOSU31_00070 PF00453 Ribosomal protein L20 SynBIOSU31_00071 PF01632 Ribosomal protein L35 SynBIOSU31_00075 PF12169 DNA polymerase III subunits gamma and tau domain III SynBIOSU31_00077 PF07724 AAA domain (Cdc48 subfamily) SynBIOSU31_00077 PF06689 ClpX C4-type zinc finger SynBIOSU31_00077 PF10431 C-terminal, D2-small domain, of ClpB protein SynBIOSU31_00078 PF00574 Clp protease SynBIOSU31_00079 PF05698 Bacterial trigger factor protein (TF) C-terminus SynBIOSU31_00079 PF05697 Bacterial trigger factor protein (TF) SynBIOSU31_00079 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SynBIOSU31_00080 PF02774 Semialdehyde dehydrogenase, dimerisation domain SynBIOSU31_00080 PF01118 Semialdehyde dehydrogenase, NAD binding domain SynBIOSU31_00081 PF00701 Dihydrodipicolinate synthetase family SynBIOSU31_00082 PF17770 Ribonuclease J C-terminal domain SynBIOSU31_00082 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain SynBIOSU31_00082 PF00753 Metallo-beta-lactamase superfamily SynBIOSU31_00084 PF09179 TilS substrate binding domain SynBIOSU31_00084 PF01171 PP-loop family SynBIOSU31_00086 PF12344 Ultra-violet resistance protein B SynBIOSU31_00086 PF02151 UvrB/uvrC motif SynBIOSU31_00086 PF04851 Type III restriction enzyme, res subunit SynBIOSU31_00086 PF00271 Helicase conserved C-terminal domain SynBIOSU31_00086 PF17757 UvrB interaction domain SynBIOSU31_00087 PF00696 Amino acid kinase family SynBIOSU31_00087 PF01842 ACT domain SynBIOSU31_00087 PF13840 ACT domain SynBIOSU31_00089 PF02570 Precorrin-8X methylmutase SynBIOSU31_00091 PF05190 MutS family domain IV SynBIOSU31_00091 PF01624 MutS domain I SynBIOSU31_00091 PF00488 MutS domain V SynBIOSU31_00091 PF05188 MutS domain II SynBIOSU31_00091 PF05192 MutS domain III SynBIOSU31_00092 PF01737 YCF9 SynBIOSU31_00093 PF00885 6,7-dimethyl-8-ribityllumazine synthase SynBIOSU31_00096 PF13439 Glycosyltransferase Family 4 SynBIOSU31_00097 PF01043 SecA preprotein cross-linking domain SynBIOSU31_00097 PF07517 SecA DEAD-like domain SynBIOSU31_00097 PF07516 SecA Wing and Scaffold domain SynBIOSU31_00098 PF02397 Bacterial sugar transferase SynBIOSU31_00102 PF00529 HlyD membrane-fusion protein of T1SS SynBIOSU31_00102 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SynBIOSU31_00103 PF00005 ABC transporter SynBIOSU31_00103 PF00664 ABC transporter transmembrane region SynBIOSU31_00103 PF03412 Peptidase C39 family SynBIOSU31_00105 PF00005 ABC transporter SynBIOSU31_00106 PF01061 ABC-2 type transporter SynBIOSU31_00108 PF00483 Nucleotidyl transferase SynBIOSU31_00109 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase SynBIOSU31_00110 PF04321 RmlD substrate binding domain SynBIOSU31_00113 PF16363 GDP-mannose 4,6 dehydratase SynBIOSU31_00116 PF00535 Glycosyl transferase family 2 SynBIOSU31_00117 PF00535 Glycosyl transferase family 2 SynBIOSU31_00121 PF16861 Carbamoyltransferase C-terminus SynBIOSU31_00121 PF02543 Carbamoyltransferase N-terminus SynBIOSU31_00122 PF00132 Bacterial transferase hexapeptide (six repeats) SynBIOSU31_00122 PF06426 Serine acetyltransferase, N-terminal SynBIOSU31_00123 PF00392 Bacterial regulatory proteins, gntR family SynBIOSU31_00126 PF05198 Translation initiation factor IF-3, N-terminal domain SynBIOSU31_00126 PF00707 Translation initiation factor IF-3, C-terminal domain SynBIOSU31_00128 PF00986 DNA gyrase B subunit, carboxyl terminus SynBIOSU31_00128 PF00204 DNA gyrase B SynBIOSU31_00128 PF01751 Toprim domain SynBIOSU31_00128 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SynBIOSU31_00130 PF02537 CrcB-like protein, Camphor Resistance (CrcB) SynBIOSU31_00131 PF02537 CrcB-like protein, Camphor Resistance (CrcB) SynBIOSU31_00132 PF00255 Glutathione peroxidase SynBIOSU31_00135 PF03448 MgtE intracellular N domain SynBIOSU31_00135 PF01769 Divalent cation transporter SynBIOSU31_00135 PF00571 CBS domain SynBIOSU31_00136 PF04539 Sigma-70 region 3 SynBIOSU31_00136 PF04542 Sigma-70 region 2 SynBIOSU31_00136 PF00140 Sigma-70 factor, region 1.2 SynBIOSU31_00136 PF04545 Sigma-70, region 4 SynBIOSU31_00137 PF00561 alpha/beta hydrolase fold SynBIOSU31_00138 PF00873 AcrB/AcrD/AcrF family SynBIOSU31_00139 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SynBIOSU31_00142 PF00730 HhH-GPD superfamily base excision DNA repair protein SynBIOSU31_00142 PF14815 NUDIX domain SynBIOSU31_00142 PF00633 Helix-hairpin-helix motif SynBIOSU31_00143 PF00294 pfkB family carbohydrate kinase SynBIOSU31_00144 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE SynBIOSU31_00145 PF05221 S-adenosyl-L-homocysteine hydrolase SynBIOSU31_00145 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain SynBIOSU31_00146 PF09335 SNARE associated Golgi protein SynBIOSU31_00147 PF00436 Single-strand binding protein family SynBIOSU31_00149 PF04085 rod shape-determining protein MreC SynBIOSU31_00152 PF00072 Response regulator receiver domain SynBIOSU31_00152 PF00486 Transcriptional regulatory protein, C terminal SynBIOSU31_00153 PF01336 OB-fold nucleic acid binding domain SynBIOSU31_00153 PF00152 tRNA synthetases class II (D, K and N) SynBIOSU31_00156 PF10017 Histidine-specific methyltransferase, SAM-dependent SynBIOSU31_00157 PF12867 DinB superfamily SynBIOSU31_00157 PF03781 Sulfatase-modifying factor enzyme 1 SynBIOSU31_00158 PF00805 Pentapeptide repeats (8 copies) SynBIOSU31_00158 PF00069 Protein kinase domain SynBIOSU31_00159 PF01668 SmpB protein SynBIOSU31_00160 PF05496 Holliday junction DNA helicase RuvB P-loop domain SynBIOSU31_00160 PF17864 RuvB AAA lid domain SynBIOSU31_00160 PF05491 RuvB C-terminal winged helix domain SynBIOSU31_00162 PF01546 Peptidase family M20/M25/M40 SynBIOSU31_00162 PF07687 Peptidase dimerisation domain SynBIOSU31_00165 PF01964 Radical SAM ThiC family SynBIOSU31_00166 PF16363 GDP-mannose 4,6 dehydratase SynBIOSU31_00170 PF01593 Flavin containing amine oxidoreductase SynBIOSU31_00172 PF04030 D-arabinono-1,4-lactone oxidase SynBIOSU31_00172 PF01565 FAD binding domain SynBIOSU31_00174 PF01040 UbiA prenyltransferase family SynBIOSU31_00177 PF00456 Transketolase, thiamine diphosphate binding domain SynBIOSU31_00177 PF02779 Transketolase, pyrimidine binding domain SynBIOSU31_00177 PF02780 Transketolase, C-terminal domain SynBIOSU31_00178 PF00109 Beta-ketoacyl synthase, N-terminal domain SynBIOSU31_00178 PF02801 Beta-ketoacyl synthase, C-terminal domain SynBIOSU31_00179 PF00550 Phosphopantetheine attachment site SynBIOSU31_00180 PF12838 4Fe-4S dicluster domain SynBIOSU31_00181 PF01380 SIS domain SynBIOSU31_00182 PF00483 Nucleotidyl transferase SynBIOSU31_00182 PF01050 Mannose-6-phosphate isomerase SynBIOSU31_00183 PF01782 RimM N-terminal domain SynBIOSU31_00183 PF05239 PRC-barrel domain SynBIOSU31_00185 PF00520 Ion transport protein SynBIOSU31_00185 PF00027 Cyclic nucleotide-binding domain SynBIOSU31_00186 PF14622 Ribonuclease-III-like SynBIOSU31_00186 PF00035 Double-stranded RNA binding motif SynBIOSU31_00187 PF08548 Peptidase M10 serralysin C terminal SynBIOSU31_00187 PF00413 Matrixin SynBIOSU31_00187 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) SynBIOSU31_00189 PF00413 Matrixin SynBIOSU31_00189 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) SynBIOSU31_00189 PF08548 Peptidase M10 serralysin C terminal SynBIOSU31_00198 PF00343 Carbohydrate phosphorylase SynBIOSU31_00200 PF00999 Sodium/hydrogen exchanger family SynBIOSU31_00202 PF12697 Alpha/beta hydrolase family SynBIOSU31_00205 PF01070 FMN-dependent dehydrogenase SynBIOSU31_00206 PF01565 FAD binding domain SynBIOSU31_00206 PF09330 D-lactate dehydrogenase, membrane binding SynBIOSU31_00210 PF00180 Isocitrate/isopropylmalate dehydrogenase SynBIOSU31_00211 PF00535 Glycosyl transferase family 2 SynBIOSU31_00214 PF01126 Heme oxygenase SynBIOSU31_00216 PF00664 ABC transporter transmembrane region SynBIOSU31_00216 PF00005 ABC transporter SynBIOSU31_00218 PF17103 Stealth protein CR4, conserved region 4 SynBIOSU31_00218 PF17102 Stealth protein CR3, conserved region 3 SynBIOSU31_00218 PF17101 Stealth protein CR1, conserved region 1 SynBIOSU31_00218 PF11380 Stealth protein CR2, conserved region 2 SynBIOSU31_00218 PF00534 Glycosyl transferases group 1 SynBIOSU31_00219 PF13439 Glycosyltransferase Family 4 SynBIOSU31_00219 PF00534 Glycosyl transferases group 1 SynBIOSU31_00220 PF00534 Glycosyl transferases group 1 SynBIOSU31_00220 PF13439 Glycosyltransferase Family 4 SynBIOSU31_00222 PF00793 DAHP synthetase I family SynBIOSU31_00224 PF01743 Poly A polymerase head domain SynBIOSU31_00230 PF13361 UvrD-like helicase C-terminal domain SynBIOSU31_00230 PF00580 UvrD/REP helicase N-terminal domain SynBIOSU31_00231 PF02769 AIR synthase related protein, C-terminal domain SynBIOSU31_00231 PF00586 AIR synthase related protein, N-terminal domain SynBIOSU31_00232 PF16363 GDP-mannose 4,6 dehydratase SynBIOSU31_00233 PF13393 Histidyl-tRNA synthetase SynBIOSU31_00233 PF03129 Anticodon binding domain SynBIOSU31_00235 PF00005 ABC transporter SynBIOSU31_00245 PF03129 Anticodon binding domain SynBIOSU31_00245 PF13393 Histidyl-tRNA synthetase SynBIOSU31_00246 PF02719 Polysaccharide biosynthesis protein SynBIOSU31_00248 PF16363 GDP-mannose 4,6 dehydratase SynBIOSU31_00250 PF16363 GDP-mannose 4,6 dehydratase SynBIOSU31_00252 PF00664 ABC transporter transmembrane region SynBIOSU31_00252 PF00005 ABC transporter SynBIOSU31_00256 PF00534 Glycosyl transferases group 1 SynBIOSU31_00256 PF13439 Glycosyltransferase Family 4 SynBIOSU31_00259 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SynBIOSU31_00260 PF08666 SAF domain SynBIOSU31_00260 PF03102 NeuB family SynBIOSU31_00264 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SynBIOSU31_00265 PF02719 Polysaccharide biosynthesis protein SynBIOSU31_00268 PF00202 Aminotransferase class-III SynBIOSU31_00269 PF02348 Cytidylyltransferase SynBIOSU31_00271 PF00117 Glutamine amidotransferase class-I SynBIOSU31_00272 PF00977 Histidine biosynthesis protein SynBIOSU31_00273 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SynBIOSU31_00273 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SynBIOSU31_00274 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain SynBIOSU31_00274 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain SynBIOSU31_00274 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain SynBIOSU31_00276 PF02397 Bacterial sugar transferase SynBIOSU31_00281 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SynBIOSU31_00282 PF02719 Polysaccharide biosynthesis protein SynBIOSU31_00283 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain SynBIOSU31_00283 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain SynBIOSU31_00283 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain SynBIOSU31_00284 PF01370 NAD dependent epimerase/dehydratase family SynBIOSU31_00285 PF02698 DUF218 domain SynBIOSU31_00290 PF01788 PsbJ SynBIOSU31_00291 PF02419 PsbL protein SynBIOSU31_00292 PF00283 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits SynBIOSU31_00293 PF00284 Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit SynBIOSU31_00293 PF00283 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits SynBIOSU31_00294 PF14870 Photosynthesis system II assembly factor YCF48 SynBIOSU31_00295 PF00301 Rubredoxin SynBIOSU31_00296 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 SynBIOSU31_00297 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit SynBIOSU31_00298 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit SynBIOSU31_00299 PF01933 Uncharacterised protein family UPF0052 SynBIOSU31_00300 PF00005 ABC transporter SynBIOSU31_00300 PF17850 CysA C-terminal regulatory domain SynBIOSU31_00300 PF12857 TOBE-like domain SynBIOSU31_00302 PF13519 von Willebrand factor type A domain SynBIOSU31_00302 PF01078 Magnesium chelatase, subunit ChlI SynBIOSU31_00302 PF17863 AAA lid domain SynBIOSU31_00303 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) SynBIOSU31_00304 PF00005 ABC transporter SynBIOSU31_00305 PF00293 NUDIX domain SynBIOSU31_00306 PF00875 DNA photolyase SynBIOSU31_00306 PF03441 FAD binding domain of DNA photolyase SynBIOSU31_00307 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SynBIOSU31_00313 PF00475 Imidazoleglycerol-phosphate dehydratase SynBIOSU31_00314 PF03055 Retinal pigment epithelial membrane protein SynBIOSU31_00318 PF02028 BCCT, betaine/carnitine/choline family transporter SynBIOSU31_00322 PF01725 Ham1 family SynBIOSU31_00323 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SynBIOSU31_00323 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SynBIOSU31_00323 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SynBIOSU31_00323 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SynBIOSU31_00325 PF01571 Aminomethyltransferase folate-binding domain SynBIOSU31_00325 PF08669 Glycine cleavage T-protein C-terminal barrel domain SynBIOSU31_00327 PF01370 NAD dependent epimerase/dehydratase family SynBIOSU31_00328 PF16363 GDP-mannose 4,6 dehydratase SynBIOSU31_00334 PF03471 Transporter associated domain SynBIOSU31_00334 PF01595 Cyclin M transmembrane N-terminal domain SynBIOSU31_00334 PF00571 CBS domain SynBIOSU31_00335 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SynBIOSU31_00335 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SynBIOSU31_00337 PF03808 Glycosyl transferase WecB/TagA/CpsF family SynBIOSU31_00338 PF02533 Photosystem II 4 kDa reaction centre component SynBIOSU31_00339 PF01702 Queuine tRNA-ribosyltransferase SynBIOSU31_00340 PF02654 Cobalamin-5-phosphate synthase SynBIOSU31_00341 PF00672 HAMP domain SynBIOSU31_00341 PF00512 His Kinase A (phospho-acceptor) domain SynBIOSU31_00341 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SynBIOSU31_00345 PF02142 MGS-like domain SynBIOSU31_00345 PF01808 AICARFT/IMPCHase bienzyme SynBIOSU31_00351 PF00258 Flavodoxin SynBIOSU31_00357 PF02401 LytB protein SynBIOSU31_00358 PF00909 Ammonium Transporter Family SynBIOSU31_00359 PF17746 SfsA N-terminal OB domain SynBIOSU31_00359 PF03749 Sugar fermentation stimulation protein RE domain SynBIOSU31_00360 PF03023 Lipid II flippase MurJ SynBIOSU31_00366 PF00464 Serine hydroxymethyltransferase SynBIOSU31_00367 PF00953 Glycosyl transferase family 4 SynBIOSU31_00368 PF02464 Competence-damaged protein SynBIOSU31_00368 PF18146 Damage-inducible protein CinA KH domain SynBIOSU31_00368 PF00994 Probable molybdopterin binding domain SynBIOSU31_00369 PF00330 Aconitase family (aconitate hydratase) SynBIOSU31_00370 PF00694 Aconitase C-terminal domain SynBIOSU31_00373 PF02532 Photosystem II reaction centre I protein (PSII 4.8 kDa protein) SynBIOSU31_00375 PF02468 Photosystem II reaction centre N protein (psbN) SynBIOSU31_00376 PF00737 Photosystem II 10 kDa phosphoprotein SynBIOSU31_00377 PF02416 mttA/Hcf106 family SynBIOSU31_00378 PF01195 Peptidyl-tRNA hydrolase SynBIOSU31_00381 PF11283 Protein of unknown function (DUF3084) SynBIOSU31_00382 PF13545 Crp-like helix-turn-helix domain SynBIOSU31_00382 PF00027 Cyclic nucleotide-binding domain SynBIOSU31_00383 PF03725 3' exoribonuclease family, domain 2 SynBIOSU31_00383 PF01138 3' exoribonuclease family, domain 1 SynBIOSU31_00386 PF00692 dUTPase SynBIOSU31_00388 PF00085 Thioredoxin SynBIOSU31_00390 PF01464 Transglycosylase SLT domain SynBIOSU31_00390 PF14718 Soluble lytic murein transglycosylase L domain SynBIOSU31_00392 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SynBIOSU31_00392 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SynBIOSU31_00392 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SynBIOSU31_00392 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SynBIOSU31_00395 PF02390 Putative methyltransferase SynBIOSU31_00400 PF06827 Zinc finger found in FPG and IleRS SynBIOSU31_00400 PF08264 Anticodon-binding domain of tRNA SynBIOSU31_00400 PF00133 tRNA synthetases class I (I, L, M and V) SynBIOSU31_00404 PF02686 Glu-tRNAGln amidotransferase C subunit SynBIOSU31_00405 PF02633 Creatinine amidohydrolase SynBIOSU31_00407 PF02592 Putative vitamin uptake transporter SynBIOSU31_00409 PF02245 Methylpurine-DNA glycosylase (MPG) SynBIOSU31_00410 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SynBIOSU31_00410 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SynBIOSU31_00412 PF07992 Pyridine nucleotide-disulphide oxidoreductase SynBIOSU31_00417 PF00148 Nitrogenase component 1 type Oxidoreductase SynBIOSU31_00417 PF08369 Proto-chlorophyllide reductase 57 kD subunit SynBIOSU31_00419 PF10742 Protein of unknown function (DUF2555) SynBIOSU31_00420 PF04127 DNA / pantothenate metabolism flavoprotein SynBIOSU31_00420 PF02441 Flavoprotein SynBIOSU31_00422 PF01716 Manganese-stabilising protein / photosystem II polypeptide SynBIOSU31_00423 PF14306 PUA-like domain SynBIOSU31_00423 PF01747 ATP-sulfurylase SynBIOSU31_00424 PF06480 FtsH Extracellular SynBIOSU31_00424 PF01434 Peptidase family M41 SynBIOSU31_00424 PF00004 ATPase family associated with various cellular activities (AAA) SynBIOSU31_00424 PF17862 AAA+ lid domain SynBIOSU31_00427 PF01264 Chorismate synthase SynBIOSU31_00429 PF08241 Methyltransferase domain SynBIOSU31_00430 PF13649 Methyltransferase domain SynBIOSU31_00431 PF00571 CBS domain SynBIOSU31_00431 PF00005 ABC transporter SynBIOSU31_00432 PF00528 Binding-protein-dependent transport system inner membrane component SynBIOSU31_00433 PF04069 Substrate binding domain of ABC-type glycine betaine transport system SynBIOSU31_00434 PF00124 Photosynthetic reaction centre protein SynBIOSU31_00437 PF02617 ATP-dependent Clp protease adaptor protein ClpS SynBIOSU31_00438 PF00155 Aminotransferase class I and II SynBIOSU31_00440 PF10150 Ribonuclease E/G family SynBIOSU31_00441 PF01351 Ribonuclease HII SynBIOSU31_00443 PF00800 Prephenate dehydratase SynBIOSU31_00443 PF01817 Chorismate mutase type II SynBIOSU31_00443 PF01842 ACT domain SynBIOSU31_00444 PF08241 Methyltransferase domain SynBIOSU31_00445 PF05362 Lon protease (S16) C-terminal proteolytic domain SynBIOSU31_00445 PF02190 ATP-dependent protease La (LON) substrate-binding domain SynBIOSU31_00445 PF00004 ATPase family associated with various cellular activities (AAA) SynBIOSU31_00446 PF00338 Ribosomal protein S10p/S20e SynBIOSU31_00447 PF03143 Elongation factor Tu C-terminal domain SynBIOSU31_00447 PF03144 Elongation factor Tu domain 2 SynBIOSU31_00447 PF00009 Elongation factor Tu GTP binding domain SynBIOSU31_00448 PF03144 Elongation factor Tu domain 2 SynBIOSU31_00448 PF00009 Elongation factor Tu GTP binding domain SynBIOSU31_00448 PF03764 Elongation factor G, domain IV SynBIOSU31_00448 PF14492 Elongation Factor G, domain II SynBIOSU31_00448 PF00679 Elongation factor G C-terminus SynBIOSU31_00449 PF00177 Ribosomal protein S7p/S5e SynBIOSU31_00450 PF00164 Ribosomal protein S12/S23 SynBIOSU31_00453 PF00310 Glutamine amidotransferases class-II SynBIOSU31_00453 PF04898 Glutamate synthase central domain SynBIOSU31_00453 PF01645 Conserved region in glutamate synthase SynBIOSU31_00453 PF01493 GXGXG motif SynBIOSU31_00455 PF04055 Radical SAM superfamily SynBIOSU31_00457 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SynBIOSU31_00459 PF00223 Photosystem I psaA/psaB protein SynBIOSU31_00460 PF00223 Photosystem I psaA/psaB protein SynBIOSU31_00464 PF00873 AcrB/AcrD/AcrF family SynBIOSU31_00465 PF02605 Photosystem I reaction centre subunit XI SynBIOSU31_00468 PF00535 Glycosyl transferase family 2 SynBIOSU31_00474 PF02887 Pyruvate kinase, alpha/beta domain SynBIOSU31_00474 PF00224 Pyruvate kinase, barrel domain SynBIOSU31_00477 PF00842 Alanine racemase, C-terminal domain SynBIOSU31_00477 PF01168 Alanine racemase, N-terminal domain SynBIOSU31_00479 PF00472 RF-1 domain SynBIOSU31_00479 PF03462 PCRF domain SynBIOSU31_00481 PF01197 Ribosomal protein L31 SynBIOSU31_00482 PF00380 Ribosomal protein S9/S16 SynBIOSU31_00483 PF00572 Ribosomal protein L13 SynBIOSU31_00484 PF01416 tRNA pseudouridine synthase SynBIOSU31_00485 PF01196 Ribosomal protein L17 SynBIOSU31_00486 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain SynBIOSU31_00486 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain SynBIOSU31_00486 PF01000 RNA polymerase Rpb3/RpoA insert domain SynBIOSU31_00487 PF00411 Ribosomal protein S11 SynBIOSU31_00488 PF00416 Ribosomal protein S13/S18 SynBIOSU31_00489 PF00444 Ribosomal protein L36 SynBIOSU31_00491 PF00344 SecY translocase SynBIOSU31_00492 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A SynBIOSU31_00493 PF00333 Ribosomal protein S5, N-terminal domain SynBIOSU31_00493 PF03719 Ribosomal protein S5, C-terminal domain SynBIOSU31_00494 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast SynBIOSU31_00495 PF00347 Ribosomal protein L6 SynBIOSU31_00496 PF00410 Ribosomal protein S8 SynBIOSU31_00497 PF00281 Ribosomal protein L5 SynBIOSU31_00497 PF00673 ribosomal L5P family C-terminus SynBIOSU31_00498 PF00467 KOW motif SynBIOSU31_00498 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 SynBIOSU31_00499 PF00238 Ribosomal protein L14p/L23e SynBIOSU31_00500 PF00366 Ribosomal protein S17 SynBIOSU31_00501 PF00831 Ribosomal L29 protein SynBIOSU31_00502 PF00252 Ribosomal protein L16p/L10e SynBIOSU31_00503 PF07650 KH domain SynBIOSU31_00503 PF00189 Ribosomal protein S3, C-terminal domain SynBIOSU31_00504 PF00237 Ribosomal protein L22p/L17e SynBIOSU31_00505 PF00203 Ribosomal protein S19 SynBIOSU31_00506 PF03947 Ribosomal Proteins L2, C-terminal domain SynBIOSU31_00506 PF00181 Ribosomal Proteins L2, RNA binding domain SynBIOSU31_00507 PF00276 Ribosomal protein L23 SynBIOSU31_00508 PF00573 Ribosomal protein L4/L1 family SynBIOSU31_00509 PF00297 Ribosomal protein L3 SynBIOSU31_00510 PF11909 NADH-quinone oxidoreductase cyanobacterial subunit N SynBIOSU31_00515 PF00154 recA bacterial DNA recombination protein SynBIOSU31_00520 PF01593 Flavin containing amine oxidoreductase SynBIOSU31_00521 PF03881 Fructosamine kinase SynBIOSU31_00524 PF00899 ThiF family SynBIOSU31_00524 PF00581 Rhodanese-like domain SynBIOSU31_00525 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP SynBIOSU31_00526 PF02540 NAD synthase SynBIOSU31_00527 PF02675 S-adenosylmethionine decarboxylase SynBIOSU31_00528 PF13476 AAA domain SynBIOSU31_00531 PF00311 Phosphoenolpyruvate carboxylase SynBIOSU31_00532 PF04107 Glutamate-cysteine ligase family 2(GCS2) SynBIOSU31_00533 PF00425 chorismate binding enzyme SynBIOSU31_00533 PF04715 Anthranilate synthase component I, N terminal region SynBIOSU31_00534 PF02531 PsaD SynBIOSU31_00535 PF13493 Domain of unknown function (DUF4118) SynBIOSU31_00535 PF00512 His Kinase A (phospho-acceptor) domain SynBIOSU31_00535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SynBIOSU31_00535 PF02702 Osmosensitive K+ channel His kinase sensor domain SynBIOSU31_00535 PF00582 Universal stress protein family SynBIOSU31_00536 PF01098 Cell cycle protein SynBIOSU31_00537 PF01883 Iron-sulfur cluster assembly protein SynBIOSU31_00537 PF10609 NUBPL iron-transfer P-loop NTPase SynBIOSU31_00538 PF01218 Coproporphyrinogen III oxidase SynBIOSU31_00551 PF00586 AIR synthase related protein, N-terminal domain SynBIOSU31_00551 PF02769 AIR synthase related protein, C-terminal domain SynBIOSU31_00552 PF03330 Lytic transglycolase SynBIOSU31_00553 PF02224 Cytidylate kinase SynBIOSU31_00553 PF02569 Pantoate-beta-alanine ligase SynBIOSU31_00554 PF01451 Low molecular weight phosphotyrosine protein phosphatase SynBIOSU31_00556 PF03130 PBS lyase HEAT-like repeat SynBIOSU31_00557 PF06206 CpeT/CpcT family (DUF1001) SynBIOSU31_00558 PF00502 Phycobilisome protein SynBIOSU31_00559 PF00502 Phycobilisome protein SynBIOSU31_00560 PF05996 Ferredoxin-dependent bilin reductase SynBIOSU31_00561 PF05996 Ferredoxin-dependent bilin reductase SynBIOSU31_00562 PF09367 CpeS-like protein SynBIOSU31_00564 PF00502 Phycobilisome protein SynBIOSU31_00565 PF00502 Phycobilisome protein SynBIOSU31_00567 PF10847 Protein of unknown function (DUF2656) SynBIOSU31_00572 PF00427 Phycobilisome Linker polypeptide SynBIOSU31_00573 PF00502 Phycobilisome protein SynBIOSU31_00574 PF00502 Phycobilisome protein SynBIOSU31_00580 PF06206 CpeT/CpcT family (DUF1001) SynBIOSU31_00581 PF09367 CpeS-like protein SynBIOSU31_00583 PF01383 CpcD/allophycocyanin linker domain SynBIOSU31_00583 PF00427 Phycobilisome Linker polypeptide SynBIOSU31_00584 PF00427 Phycobilisome Linker polypeptide SynBIOSU31_00585 PF01383 CpcD/allophycocyanin linker domain SynBIOSU31_00585 PF00427 Phycobilisome Linker polypeptide SynBIOSU31_00587 PF00427 Phycobilisome Linker polypeptide SynBIOSU31_00588 PF00427 Phycobilisome Linker polypeptide SynBIOSU31_00607 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SynBIOSU31_00608 PF02773 S-adenosylmethionine synthetase, C-terminal domain SynBIOSU31_00608 PF00438 S-adenosylmethionine synthetase, N-terminal domain SynBIOSU31_00608 PF02772 S-adenosylmethionine synthetase, central domain SynBIOSU31_00610 PF00575 S1 RNA binding domain SynBIOSU31_00611 PF03477 ATP cone domain SynBIOSU31_00612 PF01405 Photosystem II reaction centre T protein SynBIOSU31_00613 PF00421 Photosystem II protein SynBIOSU31_00615 PF00582 Universal stress protein family SynBIOSU31_00618 PF17782 DprA winged helix domain SynBIOSU31_00618 PF02481 DNA recombination-mediator protein A SynBIOSU31_00619 PF05175 Methyltransferase small domain SynBIOSU31_00620 PF01300 Telomere recombination SynBIOSU31_00620 PF03481 Putative GTP-binding controlling metal-binding SynBIOSU31_00625 PF03776 Septum formation topological specificity factor MinE SynBIOSU31_00626 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain SynBIOSU31_00627 PF03775 Septum formation inhibitor MinC, C-terminal domain SynBIOSU31_00628 PF01966 HD domain SynBIOSU31_00629 PF03572 Peptidase family S41 SynBIOSU31_00629 PF00595 PDZ domain SynBIOSU31_00630 PF00033 Cytochrome b/b6/petB SynBIOSU31_00631 PF00032 Cytochrome b(C-terminal)/b6/petD SynBIOSU31_00641 PF00596 Class II Aldolase and Adducin N-terminal domain SynBIOSU31_00642 PF06827 Zinc finger found in FPG and IleRS SynBIOSU31_00642 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain SynBIOSU31_00642 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain SynBIOSU31_00643 PF02427 Photosystem I reaction centre subunit IV / PsaE SynBIOSU31_00645 PF00271 Helicase conserved C-terminal domain SynBIOSU31_00645 PF16124 RecQ zinc-binding SynBIOSU31_00645 PF09382 RQC domain SynBIOSU31_00645 PF00270 DEAD/DEAH box helicase SynBIOSU31_00645 PF00570 HRDC domain SynBIOSU31_00646 PF01476 LysM domain SynBIOSU31_00646 PF00877 NlpC/P60 family SynBIOSU31_00647 PF00171 Aldehyde dehydrogenase family SynBIOSU31_00648 PF16657 Maltogenic Amylase, C-terminal domain SynBIOSU31_00648 PF00128 Alpha amylase, catalytic domain SynBIOSU31_00649 PF01266 FAD dependent oxidoreductase SynBIOSU31_00649 PF16901 C-terminal domain of alpha-glycerophosphate oxidase SynBIOSU31_00650 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SynBIOSU31_00650 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SynBIOSU31_00652 PF00072 Response regulator receiver domain SynBIOSU31_00652 PF00196 Bacterial regulatory proteins, luxR family SynBIOSU31_00657 PF01220 Dehydroquinase class II SynBIOSU31_00660 PF03079 ARD/ARD' family SynBIOSU31_00661 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SynBIOSU31_00663 PF07238 PilZ domain SynBIOSU31_00663 PF00535 Glycosyl transferase family 2 SynBIOSU31_00663 PF03170 Bacterial cellulose synthase subunit SynBIOSU31_00664 PF01207 Dihydrouridine synthase (Dus) SynBIOSU31_00669 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal SynBIOSU31_00669 PF01926 50S ribosome-binding GTPase SynBIOSU31_00670 PF02361 Cobalt transport protein SynBIOSU31_00672 PF01168 Alanine racemase, N-terminal domain SynBIOSU31_00673 PF04472 Cell division protein SepF SynBIOSU31_00674 PF03807 NADP oxidoreductase coenzyme F420-dependent SynBIOSU31_00674 PF14748 Pyrroline-5-carboxylate reductase dimerisation SynBIOSU31_00676 PF00534 Glycosyl transferases group 1 SynBIOSU31_00676 PF13439 Glycosyltransferase Family 4 SynBIOSU31_00678 PF02565 Recombination protein O C terminal SynBIOSU31_00678 PF11967 Recombination protein O N terminal SynBIOSU31_00679 PF01791 DeoC/LacD family aldolase SynBIOSU31_00680 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus SynBIOSU31_00680 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein SynBIOSU31_00681 PF03099 Biotin/lipoate A/B protein ligase family SynBIOSU31_00682 PF00501 AMP-binding enzyme SynBIOSU31_00684 PF02817 e3 binding domain SynBIOSU31_00684 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SynBIOSU31_00684 PF00364 Biotin-requiring enzyme SynBIOSU31_00685 PF13520 Amino acid permease SynBIOSU31_00686 PF02547 Queuosine biosynthesis protein SynBIOSU31_00687 PF00291 Pyridoxal-phosphate dependent enzyme SynBIOSU31_00688 PF01053 Cys/Met metabolism PLP-dependent enzyme SynBIOSU31_00689 PF01053 Cys/Met metabolism PLP-dependent enzyme SynBIOSU31_00699 PF01479 S4 domain SynBIOSU31_00699 PF00163 Ribosomal protein S4/S9 N-terminal domain SynBIOSU31_00700 PF01809 Putative membrane protein insertion efficiency factor SynBIOSU31_00702 PF01225 Mur ligase family, catalytic domain SynBIOSU31_00702 PF02875 Mur ligase family, glutamate ligase domain SynBIOSU31_00702 PF08245 Mur ligase middle domain SynBIOSU31_00704 PF00266 Aminotransferase class-V SynBIOSU31_00707 PF02931 Neurotransmitter-gated ion-channel ligand binding domain SynBIOSU31_00708 PF01106 NifU-like domain SynBIOSU31_00709 PF06039 Malate:quinone oxidoreductase (Mqo) SynBIOSU31_00711 PF00893 Small Multidrug Resistance protein SynBIOSU31_00712 PF12411 Choline sulfatase enzyme C terminal SynBIOSU31_00712 PF00884 Sulfatase SynBIOSU31_00717 PF07963 Prokaryotic N-terminal methylation motif SynBIOSU31_00717 PF00114 Pilin (bacterial filament) SynBIOSU31_00718 PF00114 Pilin (bacterial filament) SynBIOSU31_00718 PF07963 Prokaryotic N-terminal methylation motif SynBIOSU31_00721 PF00679 Elongation factor G C-terminus SynBIOSU31_00721 PF00009 Elongation factor Tu GTP binding domain SynBIOSU31_00721 PF06421 GTP-binding protein LepA C-terminus SynBIOSU31_00721 PF03144 Elongation factor Tu domain 2 SynBIOSU31_00723 PF07963 Prokaryotic N-terminal methylation motif SynBIOSU31_00723 PF14245 Type IV pilin PilA SynBIOSU31_00724 PF00672 HAMP domain SynBIOSU31_00724 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SynBIOSU31_00724 PF00512 His Kinase A (phospho-acceptor) domain SynBIOSU31_00725 PF00072 Response regulator receiver domain SynBIOSU31_00725 PF00486 Transcriptional regulatory protein, C terminal SynBIOSU31_00731 PF00512 His Kinase A (phospho-acceptor) domain SynBIOSU31_00731 PF00989 PAS fold SynBIOSU31_00731 PF16736 Single Cache-like SynBIOSU31_00731 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SynBIOSU31_00732 PF00528 Binding-protein-dependent transport system inner membrane component SynBIOSU31_00734 PF12105 SpoU, rRNA methylase, C-terminal SynBIOSU31_00734 PF00588 SpoU rRNA Methylase family SynBIOSU31_00735 PF01521 Iron-sulphur cluster biosynthesis SynBIOSU31_00739 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain SynBIOSU31_00740 PF00427 Phycobilisome Linker polypeptide SynBIOSU31_00740 PF01383 CpcD/allophycocyanin linker domain SynBIOSU31_00742 PF01189 16S rRNA methyltransferase RsmB/F SynBIOSU31_00742 PF01029 NusB family SynBIOSU31_00752 PF00912 Transglycosylase SynBIOSU31_00752 PF00905 Penicillin binding protein transpeptidase domain SynBIOSU31_00753 PF01040 UbiA prenyltransferase family SynBIOSU31_00755 PF00977 Histidine biosynthesis protein SynBIOSU31_00757 PF01209 ubiE/COQ5 methyltransferase family SynBIOSU31_00759 PF02091 Glycyl-tRNA synthetase alpha subunit SynBIOSU31_00760 PF03772 Competence protein SynBIOSU31_00760 PF00753 Metallo-beta-lactamase superfamily SynBIOSU31_00760 PF13567 Domain of unknown function (DUF4131) SynBIOSU31_00763 PF13356 Arm DNA-binding domain SynBIOSU31_00763 PF00589 Phage integrase family SynBIOSU31_00777 PF02796 Helix-turn-helix domain of resolvase SynBIOSU31_00777 PF00239 Resolvase, N terminal domain SynBIOSU31_00781 PF02397 Bacterial sugar transferase SynBIOSU31_00782 PF03186 CobD/Cbib protein SynBIOSU31_00783 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain SynBIOSU31_00783 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain SynBIOSU31_00784 PF00574 Clp protease SynBIOSU31_00785 PF00574 Clp protease SynBIOSU31_00787 PF04055 Radical SAM superfamily SynBIOSU31_00788 PF02548 Ketopantoate hydroxymethyltransferase SynBIOSU31_00789 PF12327 FtsZ family, C-terminal domain SynBIOSU31_00789 PF00091 Tubulin/FtsZ family, GTPase domain SynBIOSU31_00792 PF01820 D-ala D-ala ligase N-terminus SynBIOSU31_00792 PF07478 D-ala D-ala ligase C-terminus SynBIOSU31_00793 PF04055 Radical SAM superfamily SynBIOSU31_00793 PF01938 TRAM domain SynBIOSU31_00793 PF00919 Uncharacterized protein family UPF0004 SynBIOSU31_00800 PF07969 Amidohydrolase family SynBIOSU31_00803 PF08245 Mur ligase middle domain SynBIOSU31_00803 PF02875 Mur ligase family, glutamate ligase domain SynBIOSU31_00804 PF00202 Aminotransferase class-III SynBIOSU31_00806 PF00202 Aminotransferase class-III SynBIOSU31_00807 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SynBIOSU31_00810 PF00588 SpoU rRNA Methylase family SynBIOSU31_00810 PF08032 RNA 2'-O ribose methyltransferase substrate binding SynBIOSU31_00811 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SynBIOSU31_00811 PF07992 Pyridine nucleotide-disulphide oxidoreductase SynBIOSU31_00812 PF00218 Indole-3-glycerol phosphate synthase SynBIOSU31_00814 PF09055 Nickel-containing superoxide dismutase SynBIOSU31_00815 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SynBIOSU31_00819 PF01256 Carbohydrate kinase SynBIOSU31_00819 PF03853 YjeF-related protein N-terminus SynBIOSU31_00821 PF00140 Sigma-70 factor, region 1.2 SynBIOSU31_00821 PF04539 Sigma-70 region 3 SynBIOSU31_00821 PF04545 Sigma-70, region 4 SynBIOSU31_00821 PF04542 Sigma-70 region 2 SynBIOSU31_00822 PF00850 Histone deacetylase domain SynBIOSU31_00823 PF00676 Dehydrogenase E1 component SynBIOSU31_00825 PF02978 Signal peptide binding domain SynBIOSU31_00825 PF00448 SRP54-type protein, GTPase domain SynBIOSU31_00825 PF02881 SRP54-type protein, helical bundle domain SynBIOSU31_00826 PF00886 Ribosomal protein S16 SynBIOSU31_00827 PF02562 PhoH-like protein SynBIOSU31_00831 PF01926 50S ribosome-binding GTPase SynBIOSU31_00831 PF07650 KH domain SynBIOSU31_00833 PF01746 tRNA (Guanine-1)-methyltransferase SynBIOSU31_00834 PF02542 YgbB family SynBIOSU31_00836 PF00731 AIR carboxylase SynBIOSU31_00839 PF05690 Thiazole biosynthesis protein ThiG SynBIOSU31_00839 PF02597 ThiS family SynBIOSU31_00840 PF17792 ThiD2 family SynBIOSU31_00840 PF02581 Thiamine monophosphate synthase SynBIOSU31_00842 PF06574 FAD synthetase SynBIOSU31_00842 PF01687 Riboflavin kinase SynBIOSU31_00844 PF01975 Survival protein SurE SynBIOSU31_00845 PF01409 tRNA synthetases class II core domain (F) SynBIOSU31_00845 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain SynBIOSU31_00846 PF01513 ATP-NAD kinase SynBIOSU31_00847 PF00072 Response regulator receiver domain SynBIOSU31_00847 PF00486 Transcriptional regulatory protein, C terminal SynBIOSU31_00860 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SynBIOSU31_00868 PF01593 Flavin containing amine oxidoreductase SynBIOSU31_00872 PF03781 Sulfatase-modifying factor enzyme 1 SynBIOSU31_00874 PF16347 Domain of unknown function (DUF4976) SynBIOSU31_00874 PF00884 Sulfatase SynBIOSU31_00880 PF00884 Sulfatase SynBIOSU31_00894 PF01872 RibD C-terminal domain SynBIOSU31_00894 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SynBIOSU31_00896 PF00004 ATPase family associated with various cellular activities (AAA) SynBIOSU31_00896 PF01434 Peptidase family M41 SynBIOSU31_00896 PF06480 FtsH Extracellular SynBIOSU31_00896 PF17862 AAA+ lid domain SynBIOSU31_00897 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SynBIOSU31_00897 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SynBIOSU31_00900 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SynBIOSU31_00900 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SynBIOSU31_00909 PF12146 Serine aminopeptidase, S33 SynBIOSU31_00913 PF00717 Peptidase S24-like SynBIOSU31_00913 PF01726 LexA DNA binding domain SynBIOSU31_00926 PF07862 Nif11 domain SynBIOSU31_00940 PF07862 Nif11 domain SynBIOSU31_00944 PF07862 Nif11 domain SynBIOSU31_00966 PF00111 2Fe-2S iron-sulfur cluster binding domain SynBIOSU31_00991 PF02694 Uncharacterised BCR, YnfA/UPF0060 family SynBIOSU31_01002 PF08946 Osmosensory transporter coiled coil SynBIOSU31_01002 PF00083 Sugar (and other) transporter SynBIOSU31_01003 PF01894 Uncharacterised protein family UPF0047 SynBIOSU31_01009 PF07685 CobB/CobQ-like glutamine amidotransferase domain SynBIOSU31_01009 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain SynBIOSU31_01013 PF03412 Peptidase C39 family SynBIOSU31_01013 PF00664 ABC transporter transmembrane region SynBIOSU31_01013 PF00005 ABC transporter SynBIOSU31_01014 PF00005 ABC transporter SynBIOSU31_01014 PF00664 ABC transporter transmembrane region SynBIOSU31_01017 PF02545 Maf-like protein SynBIOSU31_01019 PF00421 Photosystem II protein SynBIOSU31_01020 PF00124 Photosynthetic reaction centre protein SynBIOSU31_01022 PF02392 Ycf4 SynBIOSU31_01023 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SynBIOSU31_01024 PF10369 Small subunit of acetolactate synthase SynBIOSU31_01025 PF12697 Alpha/beta hydrolase family SynBIOSU31_01027 PF08041 PetM family of cytochrome b6f complex subunit 7 SynBIOSU31_01028 PF01370 NAD dependent epimerase/dehydratase family SynBIOSU31_01030 PF13847 Methyltransferase domain SynBIOSU31_01031 PF00849 RNA pseudouridylate synthase SynBIOSU31_01033 PF01176 Translation initiation factor 1A / IF-1 SynBIOSU31_01034 PF07992 Pyridine nucleotide-disulphide oxidoreductase SynBIOSU31_01040 PF05222 Alanine dehydrogenase/PNT, N-terminal domain SynBIOSU31_01040 PF01262 Alanine dehydrogenase/PNT, C-terminal domain SynBIOSU31_01041 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch SynBIOSU31_01042 PF02233 NAD(P) transhydrogenase beta subunit SynBIOSU31_01045 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase SynBIOSU31_01045 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain SynBIOSU31_01045 PF13288 DXP reductoisomerase C-terminal domain SynBIOSU31_01046 PF00209 Sodium:neurotransmitter symporter family SynBIOSU31_01049 PF01406 tRNA synthetases class I (C) catalytic domain SynBIOSU31_01049 PF09190 DALR domain SynBIOSU31_01052 PF01612 3'-5' exonuclease SynBIOSU31_01052 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SynBIOSU31_01052 PF01367 5'-3' exonuclease, C-terminal SAM fold SynBIOSU31_01052 PF00476 DNA polymerase family A SynBIOSU31_01053 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SynBIOSU31_01054 PF06071 Protein of unknown function (DUF933) SynBIOSU31_01054 PF01926 50S ribosome-binding GTPase SynBIOSU31_01056 PF08534 Redoxin SynBIOSU31_01058 PF04193 PQ loop repeat SynBIOSU31_01062 PF00528 Binding-protein-dependent transport system inner membrane component SynBIOSU31_01063 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SynBIOSU31_01065 PF01842 ACT domain SynBIOSU31_01065 PF00742 Homoserine dehydrogenase SynBIOSU31_01065 PF03447 Homoserine dehydrogenase, NAD binding domain SynBIOSU31_01066 PF02657 Fe-S metabolism associated domain SynBIOSU31_01069 PF08241 Methyltransferase domain SynBIOSU31_01086 PF02075 Crossover junction endodeoxyribonuclease RuvC SynBIOSU31_01087 PF01078 Magnesium chelatase, subunit ChlI SynBIOSU31_01087 PF17863 AAA lid domain SynBIOSU31_01090 PF00588 SpoU rRNA Methylase family SynBIOSU31_01091 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SynBIOSU31_01093 PF00117 Glutamine amidotransferase class-I SynBIOSU31_01094 PF00085 Thioredoxin SynBIOSU31_01095 PF00478 IMP dehydrogenase / GMP reductase domain SynBIOSU31_01097 PF00521 DNA gyrase/topoisomerase IV, subunit A SynBIOSU31_01097 PF03989 DNA gyrase C-terminal domain, beta-propeller SynBIOSU31_01099 PF09210 Domain of unknown function (DUF1957) SynBIOSU31_01099 PF03065 Glycosyl hydrolase family 57 SynBIOSU31_01100 PF00682 HMGL-like SynBIOSU31_01100 PF08502 LeuA allosteric (dimerisation) domain SynBIOSU31_01101 PF00528 Binding-protein-dependent transport system inner membrane component SynBIOSU31_01108 PF01910 Thiamine-binding protein SynBIOSU31_01111 PF00849 RNA pseudouridylate synthase SynBIOSU31_01112 PF07698 7TM receptor with intracellular HD hydrolase SynBIOSU31_01112 PF07697 7TM-HD extracellular SynBIOSU31_01112 PF01966 HD domain SynBIOSU31_01113 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain SynBIOSU31_01113 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain SynBIOSU31_01114 PF00348 Polyprenyl synthetase SynBIOSU31_01118 PF00300 Histidine phosphatase superfamily (branch 1) SynBIOSU31_01119 PF00708 Acylphosphatase SynBIOSU31_01120 PF07685 CobB/CobQ-like glutamine amidotransferase domain SynBIOSU31_01120 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain SynBIOSU31_01121 PF01471 Putative peptidoglycan binding domain SynBIOSU31_01121 PF10128 Glucose-6-phosphate dehydrogenase subunit SynBIOSU31_01122 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain SynBIOSU31_01122 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain SynBIOSU31_01123 PF00970 Oxidoreductase FAD-binding domain SynBIOSU31_01123 PF01383 CpcD/allophycocyanin linker domain SynBIOSU31_01123 PF00175 Oxidoreductase NAD-binding domain SynBIOSU31_01126 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SynBIOSU31_01126 PF07689 KaiB domain SynBIOSU31_01129 PF11940 Domain of unknown function (DUF3458) Ig-like fold SynBIOSU31_01129 PF17432 Domain of unknown function (DUF3458_C) ARM repeats SynBIOSU31_01129 PF01433 Peptidase family M1 domain SynBIOSU31_01137 PF14572 Phosphoribosyl synthetase-associated domain SynBIOSU31_01137 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SynBIOSU31_01140 PF13460 NAD(P)H-binding SynBIOSU31_01140 PF11066 Protein of unknown function (DUF2867) SynBIOSU31_01141 PF02446 4-alpha-glucanotransferase SynBIOSU31_01143 PF00849 RNA pseudouridylate synthase SynBIOSU31_01143 PF01479 S4 domain SynBIOSU31_01144 PF00512 His Kinase A (phospho-acceptor) domain SynBIOSU31_01144 PF00989 PAS fold SynBIOSU31_01144 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SynBIOSU31_01145 PF00072 Response regulator receiver domain SynBIOSU31_01145 PF00486 Transcriptional regulatory protein, C terminal SynBIOSU31_01146 PF04542 Sigma-70 region 2 SynBIOSU31_01146 PF04545 Sigma-70, region 4 SynBIOSU31_01146 PF00140 Sigma-70 factor, region 1.2 SynBIOSU31_01146 PF04539 Sigma-70 region 3 SynBIOSU31_01148 PF03109 ABC1 family SynBIOSU31_01151 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain SynBIOSU31_01151 PF01276 Orn/Lys/Arg decarboxylase, major domain SynBIOSU31_01154 PF00561 alpha/beta hydrolase fold SynBIOSU31_01155 PF00465 Iron-containing alcohol dehydrogenase SynBIOSU31_01156 PF17871 AAA lid domain SynBIOSU31_01156 PF10431 C-terminal, D2-small domain, of ClpB protein SynBIOSU31_01156 PF02861 Clp amino terminal domain, pathogenicity island component SynBIOSU31_01156 PF07724 AAA domain (Cdc48 subfamily) SynBIOSU31_01156 PF00004 ATPase family associated with various cellular activities (AAA) SynBIOSU31_01158 PF00583 Acetyltransferase (GNAT) family SynBIOSU31_01159 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SynBIOSU31_01159 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SynBIOSU31_01160 PF02457 DisA bacterial checkpoint controller nucleotide-binding SynBIOSU31_01161 PF01255 Putative undecaprenyl diphosphate synthase SynBIOSU31_01162 PF04055 Radical SAM superfamily SynBIOSU31_01162 PF06968 Biotin and Thiamin Synthesis associated domain SynBIOSU31_01163 PF17773 UPF0176 acylphosphatase like domain SynBIOSU31_01166 PF04055 Radical SAM superfamily SynBIOSU31_01167 PF13662 Toprim domain SynBIOSU31_01167 PF02132 RecR protein SynBIOSU31_01177 PF00582 Universal stress protein family SynBIOSU31_01177 PF00999 Sodium/hydrogen exchanger family SynBIOSU31_01178 PF00005 ABC transporter SynBIOSU31_01178 PF00664 ABC transporter transmembrane region SynBIOSU31_01179 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) SynBIOSU31_01182 PF00270 DEAD/DEAH box helicase SynBIOSU31_01182 PF00271 Helicase conserved C-terminal domain SynBIOSU31_01182 PF03880 DbpA RNA binding domain SynBIOSU31_01183 PF01050 Mannose-6-phosphate isomerase SynBIOSU31_01183 PF00483 Nucleotidyl transferase SynBIOSU31_01184 PF13538 UvrD-like helicase C-terminal domain SynBIOSU31_01185 PF12705 PD-(D/E)XK nuclease superfamily SynBIOSU31_01185 PF00580 UvrD/REP helicase N-terminal domain SynBIOSU31_01185 PF13361 UvrD-like helicase C-terminal domain SynBIOSU31_01186 PF17946 RecC C-terminal domain SynBIOSU31_01187 PF00149 Calcineurin-like phosphoesterase SynBIOSU31_01202 PF00487 Fatty acid desaturase SynBIOSU31_01237 PF00082 Subtilase family SynBIOSU31_01242 PF07862 Nif11 domain SynBIOSU31_01253 PF07862 Nif11 domain SynBIOSU31_01260 PF01555 DNA methylase SynBIOSU31_01266 PF00072 Response regulator receiver domain SynBIOSU31_01266 PF00196 Bacterial regulatory proteins, luxR family SynBIOSU31_01268 PF00565 Staphylococcal nuclease homologue SynBIOSU31_01273 PF07862 Nif11 domain SynBIOSU31_01274 PF07862 Nif11 domain SynBIOSU31_01281 PF00196 Bacterial regulatory proteins, luxR family SynBIOSU31_01281 PF00072 Response regulator receiver domain SynBIOSU31_01298 PF17975 Ribonucleotide reductase alpha domain SynBIOSU31_01301 PF00009 Elongation factor Tu GTP binding domain SynBIOSU31_01301 PF16658 Class II release factor RF3, C-terminal domain SynBIOSU31_01304 PF01430 Hsp33 protein SynBIOSU31_01305 PF00005 ABC transporter SynBIOSU31_01310 PF01940 Integral membrane protein DUF92 SynBIOSU31_01333 PF00270 DEAD/DEAH box helicase SynBIOSU31_01333 PF00271 Helicase conserved C-terminal domain SynBIOSU31_01333 PF03461 TRCF domain SynBIOSU31_01333 PF17757 UvrB interaction domain SynBIOSU31_01333 PF02559 CarD-like/TRCF domain SynBIOSU31_01338 PF00595 PDZ domain SynBIOSU31_01338 PF03572 Peptidase family S41 SynBIOSU31_01339 PF04551 GcpE protein SynBIOSU31_01341 PF03167 Uracil DNA glycosylase superfamily SynBIOSU31_01343 PF00155 Aminotransferase class I and II SynBIOSU31_01345 PF03466 LysR substrate binding domain SynBIOSU31_01345 PF00005 ABC transporter SynBIOSU31_01346 PF00528 Binding-protein-dependent transport system inner membrane component SynBIOSU31_01353 PF00120 Glutamine synthetase, catalytic domain SynBIOSU31_01353 PF12437 Glutamine synthetase type III N terminal SynBIOSU31_01353 PF18318 Glutamine synthetase C-terminal domain SynBIOSU31_01363 PF00005 ABC transporter SynBIOSU31_01364 PF00528 Binding-protein-dependent transport system inner membrane component SynBIOSU31_01366 PF00528 Binding-protein-dependent transport system inner membrane component SynBIOSU31_01367 PF00497 Bacterial extracellular solute-binding proteins, family 3 SynBIOSU31_01369 PF00916 Sulfate permease family SynBIOSU31_01369 PF01740 STAS domain SynBIOSU31_01371 PF01903 CbiX SynBIOSU31_01372 PF00732 GMC oxidoreductase SynBIOSU31_01372 PF05199 GMC oxidoreductase SynBIOSU31_01373 PF00924 Mechanosensitive ion channel SynBIOSU31_01378 PF11780 Protein of unknown function (DUF3318) SynBIOSU31_01379 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SynBIOSU31_01379 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SynBIOSU31_01379 PF02142 MGS-like domain SynBIOSU31_01381 PF01235 Sodium:alanine symporter family SynBIOSU31_01383 PF00005 ABC transporter SynBIOSU31_01383 PF00664 ABC transporter transmembrane region SynBIOSU31_01385 PF00121 Triosephosphate isomerase SynBIOSU31_01386 PF00809 Pterin binding enzyme SynBIOSU31_01388 PF02514 CobN/Magnesium Chelatase SynBIOSU31_01388 PF11965 Domain of unknown function (DUF3479) SynBIOSU31_01389 PF01113 Dihydrodipicolinate reductase, N-terminus SynBIOSU31_01389 PF05173 Dihydrodipicolinate reductase, C-terminus SynBIOSU31_01391 PF00762 Ferrochelatase SynBIOSU31_01394 PF00156 Phosphoribosyl transferase domain SynBIOSU31_01400 PF00486 Transcriptional regulatory protein, C terminal SynBIOSU31_01400 PF00072 Response regulator receiver domain SynBIOSU31_01404 PF03976 Polyphosphate kinase 2 (PPK2) SynBIOSU31_01411 PF07664 Ferrous iron transport protein B C terminus SynBIOSU31_01411 PF07670 Nucleoside recognition SynBIOSU31_01411 PF02421 Ferrous iron transport protein B SynBIOSU31_01415 PF04966 Carbohydrate-selective porin, OprB family SynBIOSU31_01415 PF00395 S-layer homology domain SynBIOSU31_01417 PF00834 Ribulose-phosphate 3 epimerase family SynBIOSU31_01418 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded SynBIOSU31_01419 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain SynBIOSU31_01419 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain SynBIOSU31_01419 PF01488 Shikimate / quinate 5-dehydrogenase SynBIOSU31_01420 PF00483 Nucleotidyl transferase SynBIOSU31_01421 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SynBIOSU31_01421 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain SynBIOSU31_01422 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SynBIOSU31_01425 PF00920 Dehydratase family SynBIOSU31_01428 PF00805 Pentapeptide repeats (8 copies) SynBIOSU31_01429 PF07683 Cobalamin synthesis protein cobW C-terminal domain SynBIOSU31_01429 PF02492 CobW/HypB/UreG, nucleotide-binding domain SynBIOSU31_01430 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme SynBIOSU31_01433 PF00106 short chain dehydrogenase SynBIOSU31_01433 PF00300 Histidine phosphatase superfamily (branch 1) SynBIOSU31_01435 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase SynBIOSU31_01438 PF02016 LD-carboxypeptidase N-terminal domain SynBIOSU31_01438 PF17676 LD-carboxypeptidase C-terminal domain SynBIOSU31_01441 PF01116 Fructose-bisphosphate aldolase class-II SynBIOSU31_01442 PF00274 Fructose-bisphosphate aldolase class-I SynBIOSU31_01444 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SynBIOSU31_01444 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SynBIOSU31_01446 PF17848 Acetyl-coA carboxylase zinc finger domain SynBIOSU31_01446 PF01039 Carboxyl transferase domain SynBIOSU31_01447 PF00210 Ferritin-like domain SynBIOSU31_01448 PF06750 Bacterial Peptidase A24 N-terminal domain SynBIOSU31_01448 PF01478 Type IV leader peptidase family SynBIOSU31_01450 PF00485 Phosphoribulokinase / Uridine kinase family SynBIOSU31_01451 PF00180 Isocitrate/isopropylmalate dehydrogenase SynBIOSU31_01452 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD SynBIOSU31_01452 PF00132 Bacterial transferase hexapeptide (six repeats) SynBIOSU31_01457 PF00696 Amino acid kinase family SynBIOSU31_01457 PF01472 PUA domain SynBIOSU31_01460 PF03652 Holliday junction resolvase SynBIOSU31_01464 PF12452 Protein of unknown function (DUF3685) SynBIOSU31_01464 PF00072 Response regulator receiver domain SynBIOSU31_01466 PF00977 Histidine biosynthesis protein SynBIOSU31_01468 PF01066 CDP-alcohol phosphatidyltransferase SynBIOSU31_01469 PF00571 CBS domain SynBIOSU31_01471 PF01476 LysM domain SynBIOSU31_01471 PF03734 L,D-transpeptidase catalytic domain SynBIOSU31_01476 PF00520 Ion transport protein SynBIOSU31_01476 PF00027 Cyclic nucleotide-binding domain SynBIOSU31_01478 PF00462 Glutaredoxin SynBIOSU31_01486 PF00005 ABC transporter SynBIOSU31_01496 PF07862 Nif11 domain SynBIOSU31_01514 PF00271 Helicase conserved C-terminal domain SynBIOSU31_01514 PF08494 DEAD/H associated SynBIOSU31_01514 PF00270 DEAD/DEAH box helicase SynBIOSU31_01515 PF04675 DNA ligase N terminus SynBIOSU31_01515 PF04679 ATP dependent DNA ligase C terminal region SynBIOSU31_01515 PF01068 ATP dependent DNA ligase domain SynBIOSU31_01520 PF02445 Quinolinate synthetase A protein SynBIOSU31_01527 PF01761 3-dehydroquinate synthase SynBIOSU31_01528 PF00528 Binding-protein-dependent transport system inner membrane component SynBIOSU31_01529 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain SynBIOSU31_01529 PF02222 ATP-grasp domain SynBIOSU31_01544 PF03209 PUCC protein SynBIOSU31_01545 PF02617 ATP-dependent Clp protease adaptor protein ClpS SynBIOSU31_01546 PF03742 PetN SynBIOSU31_01549 PF11264 Thylakoid formation protein SynBIOSU31_01550 PF00574 Clp protease SynBIOSU31_01551 PF17862 AAA+ lid domain SynBIOSU31_01551 PF06480 FtsH Extracellular SynBIOSU31_01551 PF01434 Peptidase family M41 SynBIOSU31_01551 PF00004 ATPase family associated with various cellular activities (AAA) SynBIOSU31_01552 PF00005 ABC transporter SynBIOSU31_01552 PF02687 FtsX-like permease family SynBIOSU31_01552 PF12704 MacB-like periplasmic core domain SynBIOSU31_01553 PF00224 Pyruvate kinase, barrel domain SynBIOSU31_01553 PF02887 Pyruvate kinase, alpha/beta domain SynBIOSU31_01553 PF00391 PEP-utilising enzyme, mobile domain SynBIOSU31_01555 PF02325 YGGT family SynBIOSU31_01557 PF00291 Pyridoxal-phosphate dependent enzyme SynBIOSU31_01557 PF00585 C-terminal regulatory domain of Threonine dehydratase SynBIOSU31_01558 PF02779 Transketolase, pyrimidine binding domain SynBIOSU31_01558 PF02780 Transketolase, C-terminal domain SynBIOSU31_01558 PF13292 1-deoxy-D-xylulose-5-phosphate synthase SynBIOSU31_01559 PF01241 Photosystem I psaG / psaK SynBIOSU31_01561 PF10693 Protein of unknown function (DUF2499) SynBIOSU31_01563 PF08402 TOBE domain SynBIOSU31_01563 PF00005 ABC transporter SynBIOSU31_01564 PF00528 Binding-protein-dependent transport system inner membrane component SynBIOSU31_01565 PF00528 Binding-protein-dependent transport system inner membrane component SynBIOSU31_01566 PF01547 Bacterial extracellular solute-binding protein SynBIOSU31_01567 PF00982 Glycosyltransferase family 20 SynBIOSU31_01568 PF00578 AhpC/TSA family SynBIOSU31_01569 PF00830 Ribosomal L28 family SynBIOSU31_01570 PF00183 Hsp90 protein SynBIOSU31_01572 PF13393 Histidyl-tRNA synthetase SynBIOSU31_01573 PF00459 Inositol monophosphatase family SynBIOSU31_01576 PF00005 ABC transporter SynBIOSU31_01577 PF00528 Binding-protein-dependent transport system inner membrane component SynBIOSU31_01578 PF00528 Binding-protein-dependent transport system inner membrane component SynBIOSU31_01579 PF00012 Hsp70 protein SynBIOSU31_01580 PF01556 DnaJ C terminal domain SynBIOSU31_01580 PF00226 DnaJ domain SynBIOSU31_01582 PF13580 SIS domain SynBIOSU31_01583 PF01048 Phosphorylase superfamily SynBIOSU31_01584 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SynBIOSU31_01585 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase SynBIOSU31_01585 PF00925 GTP cyclohydrolase II SynBIOSU31_01586 PF02774 Semialdehyde dehydrogenase, dimerisation domain SynBIOSU31_01586 PF01118 Semialdehyde dehydrogenase, NAD binding domain SynBIOSU31_01587 PF00551 Formyl transferase SynBIOSU31_01592 PF00342 Phosphoglucose isomerase SynBIOSU31_01593 PF09334 tRNA synthetases class I (M) SynBIOSU31_01593 PF08264 Anticodon-binding domain of tRNA SynBIOSU31_01593 PF00133 tRNA synthetases class I (I, L, M and V) SynBIOSU31_01593 PF13603 Leucyl-tRNA synthetase, Domain 2 SynBIOSU31_01599 PF01678 Diaminopimelate epimerase SynBIOSU31_01600 PF00266 Aminotransferase class-V SynBIOSU31_01603 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family SynBIOSU31_01605 PF01467 Cytidylyltransferase-like SynBIOSU31_01606 PF02151 UvrB/uvrC motif SynBIOSU31_01606 PF08459 UvrC Helix-hairpin-helix N-terminal SynBIOSU31_01606 PF01541 GIY-YIG catalytic domain SynBIOSU31_01608 PF04244 Deoxyribodipyrimidine photo-lyase-related protein SynBIOSU31_01609 PF03653 Uncharacterised protein family (UPF0093) SynBIOSU31_01610 PF02811 PHP domain SynBIOSU31_01612 PF02514 CobN/Magnesium Chelatase SynBIOSU31_01613 PF01063 Amino-transferase class IV SynBIOSU31_01614 PF02574 Homocysteine S-methyltransferase SynBIOSU31_01614 PF00809 Pterin binding enzyme SynBIOSU31_01614 PF02965 Vitamin B12 dependent methionine synthase, activation domain SynBIOSU31_01614 PF02310 B12 binding domain SynBIOSU31_01614 PF02607 B12 binding domain SynBIOSU31_01619 PF08486 Stage II sporulation protein SynBIOSU31_01621 PF04542 Sigma-70 region 2 SynBIOSU31_01621 PF04539 Sigma-70 region 3 SynBIOSU31_01621 PF04545 Sigma-70, region 4 SynBIOSU31_01625 PF00502 Phycobilisome protein SynBIOSU31_01626 PF13847 Methyltransferase domain SynBIOSU31_01627 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain SynBIOSU31_01627 PF01588 Putative tRNA binding domain SynBIOSU31_01627 PF03147 Ferredoxin-fold anticodon binding domain SynBIOSU31_01627 PF03484 tRNA synthetase B5 domain SynBIOSU31_01627 PF03483 B3/4 domain SynBIOSU31_01628 PF00471 Ribosomal protein L33 SynBIOSU31_01629 PF01084 Ribosomal protein S18 SynBIOSU31_01630 PF00773 RNB domain SynBIOSU31_01632 PF08264 Anticodon-binding domain of tRNA SynBIOSU31_01632 PF09334 tRNA synthetases class I (M) SynBIOSU31_01632 PF00133 tRNA synthetases class I (I, L, M and V) SynBIOSU31_01637 PF03040 CemA family SynBIOSU31_01639 PF00588 SpoU rRNA Methylase family SynBIOSU31_01640 PF01551 Peptidase family M23 SynBIOSU31_01640 PF08525 Opacity-associated protein A N-terminal motif SynBIOSU31_01640 PF01476 LysM domain SynBIOSU31_01643 PF10417 C-terminal domain of 1-Cys peroxiredoxin SynBIOSU31_01643 PF00578 AhpC/TSA family SynBIOSU31_01644 PF03699 Uncharacterised protein family (UPF0182) SynBIOSU31_01645 PF17862 AAA+ lid domain SynBIOSU31_01645 PF06480 FtsH Extracellular SynBIOSU31_01645 PF00004 ATPase family associated with various cellular activities (AAA) SynBIOSU31_01645 PF01434 Peptidase family M41 SynBIOSU31_01646 PF01783 Ribosomal L32p protein family SynBIOSU31_01649 PF13419 Haloacid dehalogenase-like hydrolase SynBIOSU31_01650 PF10141 Single-strand DNA-specific exonuclease, C terminal domain SynBIOSU31_01650 PF17768 RecJ OB domain SynBIOSU31_01650 PF02272 DHHA1 domain SynBIOSU31_01650 PF01368 DHH family SynBIOSU31_01652 PF05969 Photosystem II complex subunit Ycf12 SynBIOSU31_01655 PF01169 Uncharacterized protein family UPF0016 SynBIOSU31_01657 PF08206 Ribonuclease B OB domain SynBIOSU31_01657 PF00575 S1 RNA binding domain SynBIOSU31_01657 PF00773 RNB domain SynBIOSU31_01657 PF17876 Cold shock domain SynBIOSU31_01658 PF02441 Flavoprotein SynBIOSU31_01661 PF02915 Rubrerythrin SynBIOSU31_01662 PF01523 Putative modulator of DNA gyrase SynBIOSU31_01664 PF02911 Formyl transferase, C-terminal domain SynBIOSU31_01664 PF00551 Formyl transferase SynBIOSU31_01665 PF00271 Helicase conserved C-terminal domain SynBIOSU31_01665 PF00270 DEAD/DEAH box helicase SynBIOSU31_01668 PF03741 Integral membrane protein TerC family SynBIOSU31_01670 PF10674 Protein of unknown function (DUF2488) SynBIOSU31_01671 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ SynBIOSU31_01674 PF01722 BolA-like protein SynBIOSU31_01675 PF00462 Glutaredoxin SynBIOSU31_01676 PF00561 alpha/beta hydrolase fold SynBIOSU31_01678 PF00072 Response regulator receiver domain SynBIOSU31_01678 PF00486 Transcriptional regulatory protein, C terminal SynBIOSU31_01681 PF00282 Pyridoxal-dependent decarboxylase conserved domain SynBIOSU31_01682 PF00795 Carbon-nitrogen hydrolase SynBIOSU31_01683 PF05199 GMC oxidoreductase SynBIOSU31_01685 PF01134 Glucose inhibited division protein A SynBIOSU31_01686 PF06298 Photosystem II protein Y (PsbY) SynBIOSU31_01690 PF08279 HTH domain SynBIOSU31_01690 PF00072 Response regulator receiver domain SynBIOSU31_01701 PF00480 ROK family SynBIOSU31_01706 PF01475 Ferric uptake regulator family SynBIOSU31_01708 PF04472 Cell division protein SepF SynBIOSU31_01710 PF09506 Glucosylglycerol-phosphate phosphatase (Salt_tol_Pase) SynBIOSU31_01717 PF13175 AAA ATPase domain SynBIOSU31_01718 PF12320 Type 5 capsule protein repressor C-terminal domain SynBIOSU31_01718 PF00149 Calcineurin-like phosphoesterase SynBIOSU31_01726 PF01053 Cys/Met metabolism PLP-dependent enzyme SynBIOSU31_01727 PF04204 Homoserine O-succinyltransferase SynBIOSU31_01736 PF01578 Cytochrome C assembly protein SynBIOSU31_01738 PF00005 ABC transporter SynBIOSU31_01741 PF00009 Elongation factor Tu GTP binding domain SynBIOSU31_01741 PF00679 Elongation factor G C-terminus SynBIOSU31_01741 PF03144 Elongation factor Tu domain 2 SynBIOSU31_01741 PF14492 Elongation Factor G, domain II SynBIOSU31_01743 PF01494 FAD binding domain SynBIOSU31_01744 PF02092 Glycyl-tRNA synthetase beta subunit SynBIOSU31_01745 PF01077 Nitrite and sulphite reductase 4Fe-4S domain SynBIOSU31_01745 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain SynBIOSU31_01746 PF01427 D-ala-D-ala dipeptidase SynBIOSU31_01747 PF00270 DEAD/DEAH box helicase SynBIOSU31_01747 PF00271 Helicase conserved C-terminal domain SynBIOSU31_01747 PF17191 RecG wedge domain SynBIOSU31_01749 PF00889 Elongation factor TS SynBIOSU31_01750 PF00318 Ribosomal protein S2 SynBIOSU31_01751 PF00535 Glycosyl transferase family 2 SynBIOSU31_01753 PF00005 ABC transporter SynBIOSU31_01756 PF05996 Ferredoxin-dependent bilin reductase SynBIOSU31_01757 PF05193 Peptidase M16 inactive domain SynBIOSU31_01757 PF00675 Insulinase (Peptidase family M16) SynBIOSU31_01761 PF01252 Signal peptidase (SPase) II SynBIOSU31_01762 PF14814 Bifunctional transglycosylase second domain SynBIOSU31_01762 PF00905 Penicillin binding protein transpeptidase domain SynBIOSU31_01762 PF00912 Transglycosylase SynBIOSU31_01764 PF00282 Pyridoxal-dependent decarboxylase conserved domain SynBIOSU31_01765 PF00266 Aminotransferase class-V SynBIOSU31_01766 PF00502 Phycobilisome protein SynBIOSU31_01767 PF00120 Glutamine synthetase, catalytic domain SynBIOSU31_01767 PF03951 Glutamine synthetase, beta-Grasp domain SynBIOSU31_01771 PF01209 ubiE/COQ5 methyltransferase family SynBIOSU31_01776 PF16416 ARM-like repeat domain, GUN4-N terminal SynBIOSU31_01776 PF05419 GUN4-like SynBIOSU31_01777 PF00581 Rhodanese-like domain SynBIOSU31_01778 PF03912 Psb28 protein SynBIOSU31_01779 PF01594 AI-2E family transporter SynBIOSU31_01784 PF02355 Protein export membrane protein SynBIOSU31_01785 PF02355 Protein export membrane protein SynBIOSU31_01785 PF07549 SecD/SecF GG Motif SynBIOSU31_01786 PF02780 Transketolase, C-terminal domain SynBIOSU31_01786 PF02779 Transketolase, pyrimidine binding domain SynBIOSU31_01786 PF00364 Biotin-requiring enzyme SynBIOSU31_01788 PF00288 GHMP kinases N terminal domain SynBIOSU31_01788 PF08544 GHMP kinases C terminal SynBIOSU31_01789 PF00398 Ribosomal RNA adenine dimethylase SynBIOSU31_01790 PF00485 Phosphoribulokinase / Uridine kinase family SynBIOSU31_01791 PF02021 Uncharacterised protein family UPF0102 SynBIOSU31_01794 PF02590 Predicted SPOUT methyltransferase SynBIOSU31_01797 PF00717 Peptidase S24-like SynBIOSU31_01798 PF13438 Domain of unknown function (DUF4113) SynBIOSU31_01798 PF00817 impB/mucB/samB family SynBIOSU31_01798 PF11799 impB/mucB/samB family C-terminal domain SynBIOSU31_01825 PF07862 Nif11 domain SynBIOSU31_01834 PF07862 Nif11 domain SynBIOSU31_01845 PF10410 DnaB-helicase binding domain of primase SynBIOSU31_01845 PF08275 DNA primase catalytic core, N-terminal domain SynBIOSU31_01845 PF01807 CHC2 zinc finger SynBIOSU31_01846 PF00529 HlyD membrane-fusion protein of T1SS SynBIOSU31_01846 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SynBIOSU31_01848 PF12704 MacB-like periplasmic core domain SynBIOSU31_01848 PF02687 FtsX-like permease family SynBIOSU31_01848 PF00005 ABC transporter SynBIOSU31_01849 PF00892 EamA-like transporter family SynBIOSU31_01856 PF07499 RuvA, C-terminal domain SynBIOSU31_01856 PF01330 RuvA N terminal domain SynBIOSU31_01857 PF00312 Ribosomal protein S15 SynBIOSU31_01859 PF02811 PHP domain SynBIOSU31_01859 PF14579 Helix-hairpin-helix motif SynBIOSU31_01859 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SynBIOSU31_01859 PF01336 OB-fold nucleic acid binding domain SynBIOSU31_01859 PF07733 Bacterial DNA polymerase III alpha NTPase domain SynBIOSU31_01860 PF01425 Amidase SynBIOSU31_01862 PF08032 RNA 2'-O ribose methyltransferase substrate binding SynBIOSU31_01862 PF00588 SpoU rRNA Methylase family SynBIOSU31_01863 PF00636 Ribonuclease III domain SynBIOSU31_01865 PF00117 Glutamine amidotransferase class-I SynBIOSU31_01865 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain SynBIOSU31_01866 PF00591 Glycosyl transferase family, a/b domain SynBIOSU31_01866 PF02885 Glycosyl transferase family, helical bundle domain SynBIOSU31_01868 PF00664 ABC transporter transmembrane region SynBIOSU31_01868 PF00005 ABC transporter SynBIOSU31_01870 PF01625 Peptide methionine sulfoxide reductase SynBIOSU31_01874 PF13545 Crp-like helix-turn-helix domain SynBIOSU31_01878 PF02811 PHP domain SynBIOSU31_01878 PF07733 Bacterial DNA polymerase III alpha NTPase domain SynBIOSU31_01878 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SynBIOSU31_01878 PF14579 Helix-hairpin-helix motif SynBIOSU31_01878 PF00929 Exonuclease SynBIOSU31_01879 PF00578 AhpC/TSA family SynBIOSU31_01881 PF13193 AMP-binding enzyme C-terminal domain SynBIOSU31_01881 PF16177 Acetyl-coenzyme A synthetase N-terminus SynBIOSU31_01881 PF00501 AMP-binding enzyme SynBIOSU31_01883 PF13419 Haloacid dehalogenase-like hydrolase SynBIOSU31_01884 PF00348 Polyprenyl synthetase SynBIOSU31_01885 PF01177 Asp/Glu/Hydantoin racemase SynBIOSU31_01886 PF01520 N-acetylmuramoyl-L-alanine amidase SynBIOSU31_01886 PF11741 AMIN domain SynBIOSU31_01887 PF00795 Carbon-nitrogen hydrolase SynBIOSU31_01888 PF04029 2-phosphosulpholactate phosphatase SynBIOSU31_01889 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase SynBIOSU31_01891 PF13640 2OG-Fe(II) oxygenase superfamily SynBIOSU31_01893 PF00395 S-layer homology domain SynBIOSU31_01893 PF04966 Carbohydrate-selective porin, OprB family SynBIOSU31_01898 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SynBIOSU31_01902 PF00132 Bacterial transferase hexapeptide (six repeats) SynBIOSU31_01902 PF14602 Hexapeptide repeat of succinyl-transferase SynBIOSU31_01902 PF12804 MobA-like NTP transferase domain SynBIOSU31_01903 PF00781 Diacylglycerol kinase catalytic domain SynBIOSU31_01903 PF02142 MGS-like domain SynBIOSU31_01906 PF08245 Mur ligase middle domain SynBIOSU31_01906 PF01225 Mur ligase family, catalytic domain SynBIOSU31_01906 PF02875 Mur ligase family, glutamate ligase domain SynBIOSU31_01908 PF00534 Glycosyl transferases group 1 SynBIOSU31_01908 PF08323 Starch synthase catalytic domain SynBIOSU31_01909 PF01476 LysM domain SynBIOSU31_01909 PF03734 L,D-transpeptidase catalytic domain SynBIOSU31_01910 PF00378 Enoyl-CoA hydratase/isomerase SynBIOSU31_01911 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SynBIOSU31_01911 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SynBIOSU31_01912 PF10502 Signal peptidase, peptidase S26 SynBIOSU31_01920 PF01565 FAD binding domain SynBIOSU31_01920 PF02913 FAD linked oxidases, C-terminal domain SynBIOSU31_01930 PF00124 Photosynthetic reaction centre protein SynBIOSU31_01934 PF00195 Chalcone and stilbene synthases, N-terminal domain SynBIOSU31_01934 PF02797 Chalcone and stilbene synthases, C-terminal domain SynBIOSU31_01935 PF01494 FAD binding domain SynBIOSU31_01937 PF16385 Domain of unknown function SynBIOSU31_01937 PF00884 Sulfatase SynBIOSU31_01938 PF03781 Sulfatase-modifying factor enzyme 1 SynBIOSU31_01941 PF00873 AcrB/AcrD/AcrF family SynBIOSU31_01946 PF01569 PAP2 superfamily SynBIOSU31_01972 PF01297 Zinc-uptake complex component A periplasmic SynBIOSU31_01973 PF00950 ABC 3 transport family SynBIOSU31_01974 PF00005 ABC transporter SynBIOSU31_01977 PF03773 Predicted permease SynBIOSU31_01983 PF00950 ABC 3 transport family SynBIOSU31_01984 PF00005 ABC transporter SynBIOSU31_01985 PF01297 Zinc-uptake complex component A periplasmic SynBIOSU31_02022 PF00080 Copper/zinc superoxide dismutase (SODC) SynBIOSU31_02023 PF00692 dUTPase SynBIOSU31_02100 PF02245 Methylpurine-DNA glycosylase (MPG) SynBIOSU31_02105 PF01370 NAD dependent epimerase/dehydratase family SynBIOSU31_02107 PF00106 short chain dehydrogenase SynBIOSU31_02116 PF00476 DNA polymerase family A SynBIOSU31_02116 PF01612 3'-5' exonuclease SynBIOSU31_02133 PF04389 Peptidase family M28 SynBIOSU31_02135 PF00072 Response regulator receiver domain SynBIOSU31_02135 PF00196 Bacterial regulatory proteins, luxR family SynBIOSU31_02144 PF00106 short chain dehydrogenase SynBIOSU31_02154 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 SynBIOSU31_02154 PF00535 Glycosyl transferase family 2 SynBIOSU31_02156 PF04294 VanW like protein SynBIOSU31_02158 PF02492 CobW/HypB/UreG, nucleotide-binding domain SynBIOSU31_02158 PF07683 Cobalamin synthesis protein cobW C-terminal domain SynBIOSU31_02160 PF00005 ABC transporter SynBIOSU31_02161 PF00950 ABC 3 transport family SynBIOSU31_02162 PF00067 Cytochrome P450 SynBIOSU31_02181 PF00226 DnaJ domain SynBIOSU31_02181 PF00684 DnaJ central domain SynBIOSU31_02181 PF01556 DnaJ C terminal domain SynBIOSU31_02182 PF00106 short chain dehydrogenase SynBIOSU31_02186 PF02567 Phenazine biosynthesis-like protein SynBIOSU31_02239 PF02586 SOS response associated peptidase (SRAP) SynBIOSU31_02246 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase SynBIOSU31_02246 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SynBIOSU31_02253 PF07444 Ycf66 protein N-terminus SynBIOSU31_02266 PF01062 Bestrophin, RFP-TM, chloride channel SynBIOSU31_02282 PF01593 Flavin containing amine oxidoreductase SynBIOSU31_02283 PF01694 Rhomboid family SynBIOSU31_02293 PF00633 Helix-hairpin-helix motif SynBIOSU31_02293 PF10576 Iron-sulfur binding domain of endonuclease III SynBIOSU31_02293 PF00730 HhH-GPD superfamily base excision DNA repair protein SynBIOSU31_02294 PF08543 Phosphomethylpyrimidine kinase SynBIOSU31_02302 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SynBIOSU31_02302 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SynBIOSU31_02308 PF00124 Photosynthetic reaction centre protein SynBIOSU31_02312 PF00579 tRNA synthetases class I (W and Y) SynBIOSU31_02315 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SynBIOSU31_02315 PF03129 Anticodon binding domain SynBIOSU31_02315 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SynBIOSU31_02315 PF02824 TGS domain SynBIOSU31_02317 PF02685 Glucokinase SynBIOSU31_02318 PF00288 GHMP kinases N terminal domain SynBIOSU31_02318 PF08544 GHMP kinases C terminal SynBIOSU31_02319 PF00361 Proton-conducting membrane transporter SynBIOSU31_02320 PF01432 Peptidase family M3 SynBIOSU31_02326 PF02152 Dihydroneopterin aldolase SynBIOSU31_02327 PF00171 Aldehyde dehydrogenase family SynBIOSU31_02328 PF00480 ROK family SynBIOSU31_02330 PF10726 Protein of function (DUF2518) SynBIOSU31_02335 PF02806 Alpha amylase, C-terminal all-beta domain SynBIOSU31_02335 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SynBIOSU31_02335 PF00128 Alpha amylase, catalytic domain SynBIOSU31_02336 PF01208 Uroporphyrinogen decarboxylase (URO-D) SynBIOSU31_02337 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family SynBIOSU31_02338 PF00127 Copper binding proteins, plastocyanin/azurin family SynBIOSU31_02339 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SynBIOSU31_02347 PF00004 ATPase family associated with various cellular activities (AAA) SynBIOSU31_02347 PF07724 AAA domain (Cdc48 subfamily) SynBIOSU31_02347 PF10431 C-terminal, D2-small domain, of ClpB protein SynBIOSU31_02347 PF02861 Clp amino terminal domain, pathogenicity island component SynBIOSU31_02347 PF17871 AAA lid domain SynBIOSU31_02349 PF01502 Phosphoribosyl-AMP cyclohydrolase SynBIOSU31_02349 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase SynBIOSU31_02350 PF03734 L,D-transpeptidase catalytic domain SynBIOSU31_02350 PF01476 LysM domain SynBIOSU31_02353 PF00140 Sigma-70 factor, region 1.2 SynBIOSU31_02353 PF04542 Sigma-70 region 2 SynBIOSU31_02353 PF04545 Sigma-70, region 4 SynBIOSU31_02353 PF04539 Sigma-70 region 3 SynBIOSU31_02354 PF06803 Protein of unknown function (DUF1232) SynBIOSU31_02359 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SynBIOSU31_02362 PF00290 Tryptophan synthase alpha chain SynBIOSU31_02364 PF10716 NADH dehydrogenase transmembrane subunit SynBIOSU31_02367 PF01979 Amidohydrolase family SynBIOSU31_02368 PF01740 STAS domain SynBIOSU31_02368 PF00916 Sulfate permease family SynBIOSU31_02369 PF01699 Sodium/calcium exchanger protein SynBIOSU31_02372 PF02790 Cytochrome C oxidase subunit II, transmembrane domain SynBIOSU31_02372 PF00116 Cytochrome C oxidase subunit II, periplasmic domain SynBIOSU31_02373 PF00115 Cytochrome C and Quinol oxidase polypeptide I SynBIOSU31_02374 PF00510 Cytochrome c oxidase subunit III SynBIOSU31_02375 PF00732 GMC oxidoreductase SynBIOSU31_02375 PF05199 GMC oxidoreductase SynBIOSU31_02376 PF07992 Pyridine nucleotide-disulphide oxidoreductase SynBIOSU31_02376 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SynBIOSU31_02380 PF08299 Bacterial dnaA protein helix-turn-helix SynBIOSU31_02380 PF11638 DnaA N-terminal domain SynBIOSU31_02380 PF00308 Bacterial dnaA protein SynBIOSU31_02381 PF13180 PDZ domain SynBIOSU31_02383 PF00535 Glycosyl transferase family 2 SynBIOSU31_02384 PF00583 Acetyltransferase (GNAT) family SynBIOSU31_02385 PF00561 alpha/beta hydrolase fold SynBIOSU31_02386 PF00005 ABC transporter SynBIOSU31_02386 PF00664 ABC transporter transmembrane region SynBIOSU31_02387 PF01634 ATP phosphoribosyltransferase SynBIOSU31_02388 PF00753 Metallo-beta-lactamase superfamily SynBIOSU31_02388 PF16123 Hydroxyacylglutathione hydrolase C-terminus SynBIOSU31_02389 PF00005 ABC transporter SynBIOSU31_02390 PF01042 Endoribonuclease L-PSP SynBIOSU31_02392 PF00004 ATPase family associated with various cellular activities (AAA) SynBIOSU31_02392 PF17866 AAA lid domain SynBIOSU31_02395 PF00361 Proton-conducting membrane transporter SynBIOSU31_02396 PF00361 Proton-conducting membrane transporter SynBIOSU31_02396 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus SynBIOSU31_02396 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus SynBIOSU31_02397 PF00936 BMC domain SynBIOSU31_02402 PF00101 Ribulose bisphosphate carboxylase, small chain SynBIOSU31_02403 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain SynBIOSU31_02403 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain SynBIOSU31_02404 PF00936 BMC domain SynBIOSU31_02405 PF01725 Ham1 family SynBIOSU31_02409 PF00148 Nitrogenase component 1 type Oxidoreductase SynBIOSU31_02410 PF00148 Nitrogenase component 1 type Oxidoreductase SynBIOSU31_02410 PF08369 Proto-chlorophyllide reductase 57 kD subunit SynBIOSU31_02411 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family SynBIOSU31_02412 PF00106 short chain dehydrogenase SynBIOSU31_02414 PF07465 Photosystem I protein M (PsaM) SynBIOSU31_02417 PF01925 Sulfite exporter TauE/SafE SynBIOSU31_02418 PF03099 Biotin/lipoate A/B protein ligase family SynBIOSU31_02419 PF02163 Peptidase family M50 SynBIOSU31_02419 PF00571 CBS domain SynBIOSU31_02420 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase SynBIOSU31_02422 PF01227 GTP cyclohydrolase I SynBIOSU31_02424 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit SynBIOSU31_02426 PF11266 Long-chain fatty aldehyde decarbonylase SynBIOSU31_02428 PF00575 S1 RNA binding domain SynBIOSU31_02434 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SynBIOSU31_02434 PF00205 Thiamine pyrophosphate enzyme, central domain SynBIOSU31_02434 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SynBIOSU31_02435 PF00762 Ferrochelatase SynBIOSU31_02438 PF00144 Beta-lactamase SynBIOSU31_02438 PF07930 D-aminopeptidase, domain B SynBIOSU31_02439 PF01209 ubiE/COQ5 methyltransferase family SynBIOSU31_02440 PF12557 Cob(I)alamin adenosyltransferase N terminal SynBIOSU31_02440 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP SynBIOSU31_02442 PF00696 Amino acid kinase family SynBIOSU31_02443 PF01765 Ribosome recycling factor SynBIOSU31_02445 PF00875 DNA photolyase SynBIOSU31_02445 PF03441 FAD binding domain of DNA photolyase SynBIOSU31_02447 PF00923 Transaldolase/Fructose-6-phosphate aldolase SynBIOSU31_02447 PF13202 EF hand SynBIOSU31_02448 PF00905 Penicillin binding protein transpeptidase domain SynBIOSU31_02448 PF03717 Penicillin-binding Protein dimerisation domain SynBIOSU31_02448 PF03793 PASTA domain SynBIOSU31_02451 PF00300 Histidine phosphatase superfamily (branch 1) SynBIOSU31_02453 PF10502 Signal peptidase, peptidase S26 SynBIOSU31_02457 PF00719 Inorganic pyrophosphatase SynBIOSU31_02461 PF04073 Aminoacyl-tRNA editing domain SynBIOSU31_02461 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SynBIOSU31_02461 PF03129 Anticodon binding domain SynBIOSU31_02462 PF13326 Photosystem II Pbs27 SynBIOSU31_02463 PF00709 Adenylosuccinate synthetase SynBIOSU31_02464 PF00294 pfkB family carbohydrate kinase SynBIOSU31_02465 PF02571 Precorrin-6x reductase CbiJ/CobK SynBIOSU31_02466 PF00436 Single-strand binding protein family SynBIOSU31_02468 PF11016 Protein of unknown function (DUF2854) SynBIOSU31_02469 PF00696 Amino acid kinase family SynBIOSU31_02471 PF18319 PriA DNA helicase Cys-rich region (CRR) domain SynBIOSU31_02471 PF18074 Primosomal protein N C-terminal domain SynBIOSU31_02471 PF00270 DEAD/DEAH box helicase SynBIOSU31_02471 PF00271 Helicase conserved C-terminal domain SynBIOSU31_02471 PF17764 3′ DNA-binding domain (3′BD) SynBIOSU31_02472 PF04545 Sigma-70, region 4 SynBIOSU31_02472 PF04539 Sigma-70 region 3 SynBIOSU31_02472 PF04542 Sigma-70 region 2 SynBIOSU31_02472 PF00140 Sigma-70 factor, region 1.2 SynBIOSU31_02474 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain SynBIOSU31_02474 PF03900 Porphobilinogen deaminase, C-terminal domain SynBIOSU31_02475 PF01914 MarC family integral membrane protein SynBIOSU31_02479 PF00719 Inorganic pyrophosphatase SynBIOSU31_02480 PF02074 Carboxypeptidase Taq (M32) metallopeptidase SynBIOSU31_02485 PF01329 Pterin 4 alpha carbinolamine dehydratase SynBIOSU31_02486 PF02492 CobW/HypB/UreG, nucleotide-binding domain SynBIOSU31_02486 PF07683 Cobalamin synthesis protein cobW C-terminal domain SynBIOSU31_02489 PF00528 Binding-protein-dependent transport system inner membrane component SynBIOSU31_02491 PF01545 Cation efflux family SynBIOSU31_02493 PF01969 Protein of unknown function DUF111 SynBIOSU31_02501 PF00202 Aminotransferase class-III SynBIOSU31_02503 PF04461 Protein of unknown function (DUF520) SynBIOSU31_02507 PF01145 SPFH domain / Band 7 family SynBIOSU31_02510 PF07085 DRTGG domain SynBIOSU31_02512 PF00106 short chain dehydrogenase SynBIOSU31_02513 PF00557 Metallopeptidase family M24 SynBIOSU31_02515 PF01245 Ribosomal protein L19 SynBIOSU31_02519 PF00749 tRNA synthetases class I (E and Q), catalytic domain SynBIOSU31_02520 PF02080 TrkA-C domain SynBIOSU31_02520 PF00999 Sodium/hydrogen exchanger family SynBIOSU31_02520 PF03471 Transporter associated domain SynBIOSU31_02523 PF02350 UDP-N-acetylglucosamine 2-epimerase SynBIOSU31_02524 PF00437 Type II/IV secretion system protein SynBIOSU31_02525 PF00762 Ferrochelatase SynBIOSU31_02526 PF00814 Glycoprotease family SynBIOSU31_02527 PF02507 Photosystem I reaction centre subunit III SynBIOSU31_02528 PF01701 Photosystem I reaction centre subunit IX / PsaJ SynBIOSU31_02529 PF00625 Guanylate kinase SynBIOSU31_02530 PF05670 NFACT protein RNA binding domain SynBIOSU31_02531 PF00902 Sec-independent protein translocase protein (TatC) SynBIOSU31_02533 PF00355 Rieske [2Fe-2S] domain SynBIOSU31_02534 PF16639 Apocytochrome F, N-terminal SynBIOSU31_02534 PF01333 Apocytochrome F, C-terminal SynBIOSU31_02535 PF01790 Prolipoprotein diacylglyceryl transferase SynBIOSU31_02536 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SynBIOSU31_02539 PF01757 Acyltransferase family SynBIOSU31_02544 PF02541 Ppx/GppA phosphatase family SynBIOSU31_02545 PF01040 UbiA prenyltransferase family SynBIOSU31_02546 PF02016 LD-carboxypeptidase N-terminal domain SynBIOSU31_02546 PF17676 LD-carboxypeptidase C-terminal domain SynBIOSU31_02547 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase SynBIOSU31_02549 PF02254 TrkA-N domain SynBIOSU31_02549 PF07885 Ion channel SynBIOSU31_02552 PF00118 TCP-1/cpn60 chaperonin family SynBIOSU31_02554 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase SynBIOSU31_02557 PF13732 Domain of unknown function (DUF4162) SynBIOSU31_02557 PF00005 ABC transporter SynBIOSU31_02558 PF01040 UbiA prenyltransferase family SynBIOSU31_02559 PF02628 Cytochrome oxidase assembly protein SynBIOSU31_02560 PF02790 Cytochrome C oxidase subunit II, transmembrane domain SynBIOSU31_02560 PF00116 Cytochrome C oxidase subunit II, periplasmic domain SynBIOSU31_02561 PF00115 Cytochrome C and Quinol oxidase polypeptide I SynBIOSU31_02562 PF00510 Cytochrome c oxidase subunit III SynBIOSU31_02565 PF00677 Lumazine binding domain SynBIOSU31_02572 PF01131 DNA topoisomerase SynBIOSU31_02572 PF01751 Toprim domain SynBIOSU31_02572 PF13368 Topoisomerase C-terminal repeat SynBIOSU31_02574 PF00361 Proton-conducting membrane transporter SynBIOSU31_02575 PF00005 ABC transporter SynBIOSU31_02575 PF02687 FtsX-like permease family SynBIOSU31_02575 PF12704 MacB-like periplasmic core domain SynBIOSU31_02576 PF00072 Response regulator receiver domain SynBIOSU31_02576 PF00486 Transcriptional regulatory protein, C terminal SynBIOSU31_02577 PF04225 Opacity-associated protein A LysM-like domain SynBIOSU31_02577 PF01551 Peptidase family M23 SynBIOSU31_02578 PF02237 Biotin protein ligase C terminal domain SynBIOSU31_02578 PF08279 HTH domain SynBIOSU31_02578 PF03099 Biotin/lipoate A/B protein ligase family SynBIOSU31_02579 PF00155 Aminotransferase class I and II SynBIOSU31_02580 PF04012 PspA/IM30 family SynBIOSU31_02582 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase SynBIOSU31_02583 PF13439 Glycosyltransferase Family 4 SynBIOSU31_02583 PF00534 Glycosyl transferases group 1 SynBIOSU31_02584 PF00892 EamA-like transporter family SynBIOSU31_02585 PF01343 Peptidase family S49 SynBIOSU31_02588 PF00468 Ribosomal protein L34 SynBIOSU31_02589 PF00825 Ribonuclease P SynBIOSU31_02591 PF02096 60Kd inner membrane protein SynBIOSU31_02593 PF06480 FtsH Extracellular SynBIOSU31_02593 PF00004 ATPase family associated with various cellular activities (AAA) SynBIOSU31_02593 PF01434 Peptidase family M41 SynBIOSU31_02593 PF17862 AAA+ lid domain SynBIOSU31_02595 PF02403 Seryl-tRNA synthetase N-terminal domain SynBIOSU31_02595 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SynBIOSU31_02596 PF13180 PDZ domain SynBIOSU31_02596 PF02163 Peptidase family M50 SynBIOSU31_02597 PF00253 Ribosomal protein S14p/S29e SynBIOSU31_02598 PF03725 3' exoribonuclease family, domain 2 SynBIOSU31_02598 PF00575 S1 RNA binding domain SynBIOSU31_02598 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain SynBIOSU31_02598 PF00013 KH domain SynBIOSU31_02598 PF01138 3' exoribonuclease family, domain 1 SynBIOSU31_02599 PF00459 Inositol monophosphatase family SynBIOSU31_02600 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SynBIOSU31_02617 PF07862 Nif11 domain SynBIOSU31_02647 PF00056 lactate/malate dehydrogenase, NAD binding domain SynBIOSU31_02647 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain SynBIOSU31_02664 PF00664 ABC transporter transmembrane region SynBIOSU31_02664 PF03412 Peptidase C39 family SynBIOSU31_02664 PF00005 ABC transporter SynBIOSU31_02666 PF00664 ABC transporter transmembrane region SynBIOSU31_02666 PF00005 ABC transporter SynBIOSU31_02666 PF03412 Peptidase C39 family SynBIOSU31_02687 PF01741 Large-conductance mechanosensitive channel, MscL SynBIOSU31_02692 PF00043 Glutathione S-transferase, C-terminal domain SynBIOSU31_02692 PF02798 Glutathione S-transferase, N-terminal domain SynBIOSU31_02727 PF00283 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits SynBIOSU31_02734 PF00749 tRNA synthetases class I (E and Q), catalytic domain SynBIOSU31_02735 PF00216 Bacterial DNA-binding protein SynBIOSU31_02738 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SynBIOSU31_02738 PF00128 Alpha amylase, catalytic domain SynBIOSU31_02741 PF02405 Permease MlaE SynBIOSU31_02744 PF02660 Glycerol-3-phosphate acyltransferase SynBIOSU31_02745 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SynBIOSU31_02746 PF00579 tRNA synthetases class I (W and Y) SynBIOSU31_02751 PF02789 Cytosol aminopeptidase family, N-terminal domain SynBIOSU31_02751 PF00883 Cytosol aminopeptidase family, catalytic domain SynBIOSU31_02754 PF01641 SelR domain SynBIOSU31_02754 PF01625 Peptide methionine sulfoxide reductase SynBIOSU31_02755 PF02684 Lipid-A-disaccharide synthetase SynBIOSU31_02756 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 SynBIOSU31_02756 PF00132 Bacterial transferase hexapeptide (six repeats) SynBIOSU31_02757 PF07977 FabA-like domain SynBIOSU31_02758 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase SynBIOSU31_02760 PF01259 SAICAR synthetase SynBIOSU31_02762 PF02843 Phosphoribosylglycinamide synthetase, C domain SynBIOSU31_02762 PF02844 Phosphoribosylglycinamide synthetase, N domain SynBIOSU31_02762 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain SynBIOSU31_02763 PF00672 HAMP domain SynBIOSU31_02763 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SynBIOSU31_02763 PF00512 His Kinase A (phospho-acceptor) domain SynBIOSU31_02763 PF00989 PAS fold SynBIOSU31_02764 PF06745 KaiC SynBIOSU31_02765 PF07689 KaiB domain SynBIOSU31_02766 PF07688 KaiA C-terminal domain SynBIOSU31_02767 PF00829 Ribosomal prokaryotic L21 protein SynBIOSU31_02768 PF01016 Ribosomal L27 protein SynBIOSU31_02773 PF01509 TruB family pseudouridylate synthase (N terminal domain) SynBIOSU31_02773 PF16198 tRNA pseudouridylate synthase B C-terminal domain SynBIOSU31_02774 PF01709 Transcriptional regulator SynBIOSU31_02775 PF05378 Hydantoinase/oxoprolinase N-terminal region SynBIOSU31_02775 PF01968 Hydantoinase/oxoprolinase SynBIOSU31_02776 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SynBIOSU31_02777 PF08486 Stage II sporulation protein SynBIOSU31_02778 PF12706 Beta-lactamase superfamily domain SynBIOSU31_02779 PF14495 Cytochrome c-550 domain SynBIOSU31_02781 PF00111 2Fe-2S iron-sulfur cluster binding domain SynBIOSU31_02783 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SynBIOSU31_02783 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SynBIOSU31_02783 PF01842 ACT domain SynBIOSU31_02788 PF08245 Mur ligase middle domain SynBIOSU31_02788 PF02875 Mur ligase family, glutamate ligase domain SynBIOSU31_02795 PF01192 RNA polymerase Rpb6 SynBIOSU31_02797 PF00012 Hsp70 protein SynBIOSU31_02799 PF00156 Phosphoribosyl transferase domain SynBIOSU31_02800 PF06415 BPG-independent PGAM N-terminus (iPGM_N) SynBIOSU31_02800 PF01676 Metalloenzyme superfamily SynBIOSU31_02802 PF00909 Ammonium Transporter Family SynBIOSU31_02803 PF00118 TCP-1/cpn60 chaperonin family SynBIOSU31_02804 PF00166 Chaperonin 10 Kd subunit SynBIOSU31_02805 PF02874 ATP synthase alpha/beta family, beta-barrel domain SynBIOSU31_02805 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SynBIOSU31_02806 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain SynBIOSU31_02806 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain SynBIOSU31_02808 PF08525 Opacity-associated protein A N-terminal motif SynBIOSU31_02808 PF01476 LysM domain SynBIOSU31_02808 PF01551 Peptidase family M23 SynBIOSU31_02810 PF04839 Plastid and cyanobacterial ribosomal protein (PSRP-3 / Ycf65) SynBIOSU31_02812 PF05195 Aminopeptidase P, N-terminal domain SynBIOSU31_02812 PF00557 Metallopeptidase family M24 SynBIOSU31_02813 PF00571 CBS domain SynBIOSU31_02813 PF01595 Cyclin M transmembrane N-terminal domain SynBIOSU31_02814 PF01926 50S ribosome-binding GTPase SynBIOSU31_02814 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal SynBIOSU31_02815 PF01467 Cytidylyltransferase-like SynBIOSU31_02816 PF00795 Carbon-nitrogen hydrolase SynBIOSU31_02816 PF02540 NAD synthase SynBIOSU31_02817 PF01262 Alanine dehydrogenase/PNT, C-terminal domain SynBIOSU31_02817 PF05222 Alanine dehydrogenase/PNT, N-terminal domain SynBIOSU31_02819 PF11805 Protein of unknown function (DUF3326) SynBIOSU31_02822 PF00111 2Fe-2S iron-sulfur cluster binding domain SynBIOSU31_02823 PF00231 ATP synthase SynBIOSU31_02824 PF00306 ATP synthase alpha/beta chain, C terminal domain SynBIOSU31_02824 PF02874 ATP synthase alpha/beta family, beta-barrel domain SynBIOSU31_02824 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SynBIOSU31_02825 PF00213 ATP synthase delta (OSCP) subunit SynBIOSU31_02826 PF00430 ATP synthase B/B' CF(0) SynBIOSU31_02827 PF00430 ATP synthase B/B' CF(0) SynBIOSU31_02828 PF00137 ATP synthase subunit C SynBIOSU31_02829 PF00119 ATP synthase A chain SynBIOSU31_02830 PF12966 N-ATPase, AtpR subunit SynBIOSU31_02831 PF13847 Methyltransferase domain SynBIOSU31_02832 PF00502 Phycobilisome protein SynBIOSU31_02832 PF00427 Phycobilisome Linker polypeptide SynBIOSU31_02833 PF00502 Phycobilisome protein SynBIOSU31_02834 PF00502 Phycobilisome protein SynBIOSU31_02835 PF01383 CpcD/allophycocyanin linker domain SynBIOSU31_02836 PF01098 Cell cycle protein SynBIOSU31_02838 PF05140 ResB-like family SynBIOSU31_02839 PF14489 QueF-like protein SynBIOSU31_02842 PF00543 Nitrogen regulatory protein P-II SynBIOSU31_02843 PF01479 S4 domain SynBIOSU31_02843 PF01728 FtsJ-like methyltransferase SynBIOSU31_02845 PF00206 Lyase SynBIOSU31_02845 PF10397 Adenylosuccinate lyase C-terminus SynBIOSU31_02846 PF10415 Fumarase C C-terminus SynBIOSU31_02846 PF00206 Lyase SynBIOSU31_02847 PF00270 DEAD/DEAH box helicase SynBIOSU31_02847 PF08148 DSHCT (NUC185) domain SynBIOSU31_02847 PF00271 Helicase conserved C-terminal domain SynBIOSU31_02848 PF00155 Aminotransferase class I and II SynBIOSU31_02851 PF13649 Methyltransferase domain SynBIOSU31_02854 PF00202 Aminotransferase class-III SynBIOSU31_02856 PF00226 DnaJ domain SynBIOSU31_02856 PF01556 DnaJ C terminal domain SynBIOSU31_02856 PF00684 DnaJ central domain SynBIOSU31_02857 PF02527 rRNA small subunit methyltransferase G SynBIOSU31_02866 PF00474 Sodium:solute symporter family SynBIOSU31_02867 PF04055 Radical SAM superfamily SynBIOSU31_02868 PF00762 Ferrochelatase SynBIOSU31_02869 PF05000 RNA polymerase Rpb1, domain 4 SynBIOSU31_02869 PF04998 RNA polymerase Rpb1, domain 5 SynBIOSU31_02869 PF04983 RNA polymerase Rpb1, domain 3 SynBIOSU31_02870 PF04983 RNA polymerase Rpb1, domain 3 SynBIOSU31_02870 PF04997 RNA polymerase Rpb1, domain 1 SynBIOSU31_02870 PF00623 RNA polymerase Rpb1, domain 2 SynBIOSU31_02871 PF04565 RNA polymerase Rpb2, domain 3 SynBIOSU31_02871 PF04563 RNA polymerase beta subunit SynBIOSU31_02871 PF04561 RNA polymerase Rpb2, domain 2 SynBIOSU31_02871 PF00562 RNA polymerase Rpb2, domain 6 SynBIOSU31_02871 PF04560 RNA polymerase Rpb2, domain 7 SynBIOSU31_02871 PF10385 RNA polymerase beta subunit external 1 domain SynBIOSU31_02873 PF01026 TatD related DNase SynBIOSU31_02874 PF01649 Ribosomal protein S20 SynBIOSU31_02875 PF00815 Histidinol dehydrogenase SynBIOSU31_02876 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) SynBIOSU31_02877 PF13180 PDZ domain SynBIOSU31_02880 PF04055 Radical SAM superfamily SynBIOSU31_02881 PF02576 RimP N-terminal domain SynBIOSU31_02882 PF13184 NusA-like KH domain SynBIOSU31_02882 PF08529 NusA N-terminal domain SynBIOSU31_02882 PF00575 S1 RNA binding domain SynBIOSU31_02884 PF11987 Translation-initiation factor 2 SynBIOSU31_02884 PF00009 Elongation factor Tu GTP binding domain SynBIOSU31_02884 PF04760 Translation initiation factor IF-2, N-terminal region SynBIOSU31_02895 PF00124 Photosynthetic reaction centre protein SynBIOSU31_02901 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family SynBIOSU31_02902 PF13409 Glutathione S-transferase, N-terminal domain SynBIOSU31_02904 PF12848 ABC transporter SynBIOSU31_02904 PF16326 ABC transporter C-terminal domain SynBIOSU31_02904 PF00005 ABC transporter SynBIOSU31_02907 PF01018 GTP1/OBG SynBIOSU31_02907 PF01926 50S ribosome-binding GTPase SynBIOSU31_02908 PF08402 TOBE domain SynBIOSU31_02908 PF00005 ABC transporter SynBIOSU31_02909 PF00488 MutS domain V SynBIOSU31_02909 PF01713 Smr domain SynBIOSU31_02911 PF00490 Delta-aminolevulinic acid dehydratase SynBIOSU31_02912 PF01556 DnaJ C terminal domain SynBIOSU31_02912 PF00226 DnaJ domain SynBIOSU31_02914 PF00916 Sulfate permease family SynBIOSU31_02914 PF01740 STAS domain SynBIOSU31_02917 PF00258 Flavodoxin SynBIOSU31_02918 PF07992 Pyridine nucleotide-disulphide oxidoreductase SynBIOSU31_02921 PF00421 Photosystem II protein SynBIOSU31_02931 PF00072 Response regulator receiver domain SynBIOSU31_02931 PF00196 Bacterial regulatory proteins, luxR family SynBIOSU31_02963 PF00106 short chain dehydrogenase SynBIOSU31_02966 PF07862 Nif11 domain SynBIOSU31_02973 PF00124 Photosynthetic reaction centre protein SynBIOSU31_02989 PF07862 Nif11 domain SynBIOSU31_03006 PF02926 THUMP domain SynBIOSU31_03006 PF01170 Putative RNA methylase family UPF0020 SynBIOSU31_03010 PF02463 RecF/RecN/SMC N terminal domain SynBIOSU31_03010 PF06470 SMC proteins Flexible Hinge Domain SynBIOSU31_03013 PF01641 SelR domain SynBIOSU31_03014 PF02684 Lipid-A-disaccharide synthetase SynBIOSU31_03016 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SynBIOSU31_03016 PF00289 Biotin carboxylase, N-terminal domain SynBIOSU31_03016 PF02785 Biotin carboxylase C-terminal domain SynBIOSU31_03018 PF06596 Photosystem II reaction centre X protein (PsbX) SynBIOSU31_03019 PF07444 Ycf66 protein N-terminus SynBIOSU31_03024 PF06472 ABC transporter transmembrane region 2 SynBIOSU31_03024 PF00005 ABC transporter SynBIOSU31_03025 PF01230 HIT domain SynBIOSU31_03026 PF13335 Magnesium chelatase, subunit ChlI C-terminal SynBIOSU31_03026 PF01078 Magnesium chelatase, subunit ChlI SynBIOSU31_03028 PF01165 Ribosomal protein S21 SynBIOSU31_03031 PF01327 Polypeptide deformylase SynBIOSU31_03034 PF00596 Class II Aldolase and Adducin N-terminal domain SynBIOSU31_03035 PF01008 Initiation factor 2 subunit family SynBIOSU31_03036 PF00266 Aminotransferase class-V SynBIOSU31_03037 PF01458 Uncharacterized protein family (UPF0051) SynBIOSU31_03038 PF00005 ABC transporter SynBIOSU31_03039 PF01458 Uncharacterized protein family (UPF0051) SynBIOSU31_03043 PF09367 CpeS-like protein SynBIOSU31_03044 PF00427 Phycobilisome Linker polypeptide SynBIOSU31_03050 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SynBIOSU31_03061 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SynBIOSU31_03061 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SynBIOSU31_03061 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SynBIOSU31_03061 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SynBIOSU31_03063 PF00873 AcrB/AcrD/AcrF family SynBIOSU31_03064 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SynBIOSU31_03065 PF05496 Holliday junction DNA helicase RuvB P-loop domain SynBIOSU31_03065 PF12002 MgsA AAA+ ATPase C terminal SynBIOSU31_03065 PF16193 AAA C-terminal domain SynBIOSU31_03069 PF00578 AhpC/TSA family SynBIOSU31_03071 PF01507 Phosphoadenosine phosphosulfate reductase family SynBIOSU31_03072 PF07992 Pyridine nucleotide-disulphide oxidoreductase SynBIOSU31_03073 PF16360 GTP-binding GTPase Middle Region SynBIOSU31_03073 PF01926 50S ribosome-binding GTPase SynBIOSU31_03073 PF13167 GTP-binding GTPase N-terminal SynBIOSU31_03074 PF02080 TrkA-C domain SynBIOSU31_03074 PF03600 Citrate transporter SynBIOSU31_03075 PF02386 Cation transport protein SynBIOSU31_03076 PF02080 TrkA-C domain SynBIOSU31_03076 PF02254 TrkA-N domain SynBIOSU31_03077 PF03702 Anhydro-N-acetylmuramic acid kinase SynBIOSU31_03082 PF12848 ABC transporter SynBIOSU31_03082 PF16326 ABC transporter C-terminal domain SynBIOSU31_03082 PF00005 ABC transporter SynBIOSU31_03084 PF13180 PDZ domain SynBIOSU31_03088 PF00270 DEAD/DEAH box helicase SynBIOSU31_03088 PF08482 ATP-dependent helicase C-terminal SynBIOSU31_03088 PF04408 Helicase associated domain (HA2) SynBIOSU31_03088 PF00271 Helicase conserved C-terminal domain SynBIOSU31_03091 PF02601 Exonuclease VII, large subunit SynBIOSU31_03091 PF13742 OB-fold nucleic acid binding domain SynBIOSU31_03103 PF00459 Inositol monophosphatase family SynBIOSU31_03106 PF02673 Bacitracin resistance protein BacA SynBIOSU31_03108 PF06514 Photosystem II 12 kDa extrinsic protein (PsbU) SynBIOSU31_03109 PF00890 FAD binding domain SynBIOSU31_03109 PF02910 Fumarate reductase flavoprotein C-term SynBIOSU31_03110 PF07884 Vitamin K epoxide reductase family SynBIOSU31_03111 PF04055 Radical SAM superfamily SynBIOSU31_03111 PF00919 Uncharacterized protein family UPF0004 SynBIOSU31_03111 PF18693 TRAM domain SynBIOSU31_03114 PF02310 B12 binding domain SynBIOSU31_03114 PF13282 Domain of unknown function (DUF4070) SynBIOSU31_03114 PF04055 Radical SAM superfamily SynBIOSU31_03115 PF14251 Domain of unknown function (DUF4346) SynBIOSU31_03120 PF01202 Shikimate kinase SynBIOSU31_03123 PF00043 Glutathione S-transferase, C-terminal domain SynBIOSU31_03123 PF02798 Glutathione S-transferase, N-terminal domain SynBIOSU31_03128 PF02033 Ribosome-binding factor A SynBIOSU31_03129 PF01915 Glycosyl hydrolase family 3 C-terminal domain SynBIOSU31_03129 PF00933 Glycosyl hydrolase family 3 N terminal domain SynBIOSU31_03130 PF00535 Glycosyl transferase family 2 SynBIOSU31_03130 PF13181 Tetratricopeptide repeat SynBIOSU31_03131 PF02602 Uroporphyrinogen-III synthase HemD SynBIOSU31_03134 PF01593 Flavin containing amine oxidoreductase SynBIOSU31_03135 PF01521 Iron-sulphur cluster biosynthesis SynBIOSU31_03138 PF01370 NAD dependent epimerase/dehydratase family SynBIOSU31_03138 PF08338 Domain of unknown function (DUF1731) SynBIOSU31_03139 PF02080 TrkA-C domain SynBIOSU31_03139 PF00999 Sodium/hydrogen exchanger family SynBIOSU31_03139 PF03471 Transporter associated domain SynBIOSU31_03140 PF11910 Cyanobacterial and plant NDH-1 subunit O SynBIOSU31_03142 PF00226 DnaJ domain SynBIOSU31_03142 PF01556 DnaJ C terminal domain SynBIOSU31_03142 PF00684 DnaJ central domain SynBIOSU31_03143 PF00291 Pyridoxal-phosphate dependent enzyme SynBIOSU31_03144 PF04966 Carbohydrate-selective porin, OprB family SynBIOSU31_03144 PF00395 S-layer homology domain SynBIOSU31_03148 PF00535 Glycosyl transferase family 2 SynBIOSU31_03153 PF00124 Photosynthetic reaction centre protein SynBIOSU31_03155 PF00005 ABC transporter SynBIOSU31_03157 PF00072 Response regulator receiver domain SynBIOSU31_03157 PF00486 Transcriptional regulatory protein, C terminal SynBIOSU31_03158 PF09115 DNA polymerase III, delta subunit, C terminal SynBIOSU31_03159 PF02223 Thymidylate kinase SynBIOSU31_03160 PF00403 Heavy-metal-associated domain SynBIOSU31_03162 PF18073 Rubredoxin metal binding domain SynBIOSU31_03162 PF06745 KaiC SynBIOSU31_03163 PF00072 Response regulator receiver domain SynBIOSU31_03163 PF00486 Transcriptional regulatory protein, C terminal SynBIOSU31_03164 PF02504 Fatty acid synthesis protein SynBIOSU31_03165 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SynBIOSU31_03165 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SynBIOSU31_03166 PF00698 Acyl transferase domain SynBIOSU31_03167 PF00501 AMP-binding enzyme SynBIOSU31_03167 PF01553 Acyltransferase SynBIOSU31_03167 PF13193 AMP-binding enzyme C-terminal domain SynBIOSU31_03169 PF00814 Glycoprotease family SynBIOSU31_03171 PF12627 Probable RNA and SrmB- binding site of polymerase A SynBIOSU31_03171 PF13735 tRNA nucleotidyltransferase domain 2 putative SynBIOSU31_03171 PF01743 Poly A polymerase head domain SynBIOSU31_03174 PF01593 Flavin containing amine oxidoreductase SynBIOSU31_03175 PF10664 Cyanobacterial and plastid NDH-1 subunit M SynBIOSU31_03177 PF03466 LysR substrate binding domain SynBIOSU31_03177 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SynBIOSU31_03179 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus SynBIOSU31_03179 PF00361 Proton-conducting membrane transporter SynBIOSU31_03179 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus SynBIOSU31_03180 PF00395 S-layer homology domain SynBIOSU31_03180 PF04966 Carbohydrate-selective porin, OprB family SynBIOSU31_03181 PF00361 Proton-conducting membrane transporter SynBIOSU31_03183 PF00483 Nucleotidyl transferase SynBIOSU31_03185 PF00072 Response regulator receiver domain SynBIOSU31_03185 PF00196 Bacterial regulatory proteins, luxR family SynBIOSU31_03188 PF01513 ATP-NAD kinase SynBIOSU31_03189 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L SynBIOSU31_03190 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 SynBIOSU31_03191 PF13237 4Fe-4S dicluster domain SynBIOSU31_03192 PF00146 NADH dehydrogenase SynBIOSU31_03193 PF00285 Citrate synthase, C-terminal domain SynBIOSU31_03197 PF01628 HrcA protein C terminal domain SynBIOSU31_03198 PF00291 Pyridoxal-phosphate dependent enzyme SynBIOSU31_03200 PF01253 Translation initiation factor SUI1 SynBIOSU31_03202 PF01594 AI-2E family transporter SynBIOSU31_03204 PF00731 AIR carboxylase SynBIOSU31_03205 PF01979 Amidohydrolase family SynBIOSU31_03206 PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus SynBIOSU31_03208 PF00849 RNA pseudouridylate synthase SynBIOSU31_03209 PF00486 Transcriptional regulatory protein, C terminal SynBIOSU31_03209 PF00072 Response regulator receiver domain SynBIOSU31_03211 PF00266 Aminotransferase class-V SynBIOSU31_03214 PF01795 MraW methylase family SynBIOSU31_03215 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit SynBIOSU31_03219 PF06298 Photosystem II protein Y (PsbY) SynBIOSU31_03222 PF00427 Phycobilisome Linker polypeptide SynBIOSU31_03226 PF01040 UbiA prenyltransferase family SynBIOSU31_03227 PF00425 chorismate binding enzyme SynBIOSU31_03228 PF00326 Prolyl oligopeptidase family SynBIOSU31_03229 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain SynBIOSU31_03229 PF02951 Prokaryotic glutathione synthetase, N-terminal domain SynBIOSU31_03230 PF00462 Glutaredoxin SynBIOSU31_03232 PF03462 PCRF domain SynBIOSU31_03232 PF00472 RF-1 domain SynBIOSU31_03234 PF02130 Uncharacterized protein family UPF0054 SynBIOSU31_03235 PF01219 Prokaryotic diacylglycerol kinase SynBIOSU31_03236 PF00117 Glutamine amidotransferase class-I SynBIOSU31_03238 PF00155 Aminotransferase class I and II SynBIOSU31_03239 PF02696 Uncharacterized ACR, YdiU/UPF0061 family SynBIOSU31_03240 PF00710 Asparaginase, N-terminal SynBIOSU31_03240 PF17763 Glutaminase/Asparaginase C-terminal domain SynBIOSU31_03241 PF05746 DALR anticodon binding domain SynBIOSU31_03241 PF03485 Arginyl tRNA synthetase N terminal domain SynBIOSU31_03241 PF00750 tRNA synthetases class I (R) SynBIOSU31_03242 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain SynBIOSU31_03242 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain SynBIOSU31_03243 PF10396 GTP-binding protein TrmE N-terminus SynBIOSU31_03243 PF12631 MnmE helical domain SynBIOSU31_03243 PF01926 50S ribosome-binding GTPase SynBIOSU31_03245 PF13291 ACT domain SynBIOSU31_03245 PF04607 Region found in RelA / SpoT proteins SynBIOSU31_03245 PF02824 TGS domain SynBIOSU31_03246 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SynBIOSU31_03246 PF00005 ABC transporter SynBIOSU31_03251 PF01479 S4 domain SynBIOSU31_03251 PF00849 RNA pseudouridylate synthase SynBIOSU31_03252 PF01926 50S ribosome-binding GTPase SynBIOSU31_03253 PF00582 Universal stress protein family SynBIOSU31_03254 PF00162 Phosphoglycerate kinase SynBIOSU31_03256 PF04955 HupE / UreJ protein SynBIOSU31_03262 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase SynBIOSU31_03262 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SynBIOSU31_03264 PF04101 Glycosyltransferase family 28 C-terminal domain SynBIOSU31_03264 PF03033 Glycosyltransferase family 28 N-terminal domain SynBIOSU31_03265 PF00155 Aminotransferase class I and II SynBIOSU31_03267 PF03958 Bacterial type II/III secretion system short domain SynBIOSU31_03267 PF00263 Bacterial type II and III secretion system protein SynBIOSU31_03271 PF01180 Dihydroorotate dehydrogenase SynBIOSU31_03272 PF00075 RNase H SynBIOSU31_03275 PF00542 Ribosomal protein L7/L12 C-terminal domain SynBIOSU31_03275 PF16320 Ribosomal protein L7/L12 dimerisation domain SynBIOSU31_03276 PF00466 Ribosomal protein L10 SynBIOSU31_03277 PF00687 Ribosomal protein L1p/L10e family SynBIOSU31_03278 PF03946 Ribosomal protein L11, N-terminal domain SynBIOSU31_03278 PF00298 Ribosomal protein L11, RNA binding domain SynBIOSU31_03279 PF00467 KOW motif SynBIOSU31_03279 PF02357 Transcription termination factor nusG SynBIOSU31_03280 PF00584 SecE/Sec61-gamma subunits of protein translocation complex SynBIOSU31_03281 PF02861 Clp amino terminal domain, pathogenicity island component SynBIOSU31_03281 PF17871 AAA lid domain SynBIOSU31_03281 PF10431 C-terminal, D2-small domain, of ClpB protein SynBIOSU31_03281 PF00004 ATPase family associated with various cellular activities (AAA) SynBIOSU31_03281 PF07724 AAA domain (Cdc48 subfamily) SynBIOSU31_03282 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SynBIOSU31_03283 PF03952 Enolase, N-terminal domain SynBIOSU31_03283 PF00113 Enolase, C-terminal TIM barrel domain SynBIOSU31_03285 PF03109 ABC1 family SynBIOSU31_03288 PF01960 ArgJ family SynBIOSU31_03289 PF01121 Dephospho-CoA kinase SynBIOSU31_03292 PF00211 Adenylate and Guanylate cyclase catalytic domain SynBIOSU31_03293 PF02934 GatB/GatE catalytic domain SynBIOSU31_03293 PF02637 GatB domain SynBIOSU31_03294 PF01266 FAD dependent oxidoreductase SynBIOSU31_03294 PF05690 Thiazole biosynthesis protein ThiG SynBIOSU31_03295 PF00334 Nucleoside diphosphate kinase SynBIOSU31_03296 PF17810 Arginine decarboxylase helical bundle domain SynBIOSU31_03296 PF17944 Arginine decarboxylase C-terminal helical extension SynBIOSU31_03296 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SynBIOSU31_03297 PF00027 Cyclic nucleotide-binding domain SynBIOSU31_03297 PF07885 Ion channel SynBIOSU31_03302 PF00211 Adenylate and Guanylate cyclase catalytic domain SynBIOSU31_03308 PF02142 MGS-like domain SynBIOSU31_03309 PF02743 Cache domain SynBIOSU31_03309 PF00211 Adenylate and Guanylate cyclase catalytic domain SynBIOSU31_03309 PF00672 HAMP domain SynBIOSU31_03311 PF00365 Phosphofructokinase SynBIOSU31_03313 PF02272 DHHA1 domain SynBIOSU31_03313 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SynBIOSU31_03313 PF01411 tRNA synthetases class II (A) SynBIOSU31_03315 PF00176 SNF2 family N-terminal domain SynBIOSU31_03315 PF12419 SNF2 Helicase protein SynBIOSU31_03315 PF00271 Helicase conserved C-terminal domain SynBIOSU31_03318 PF00011 Hsp20/alpha crystallin family SynBIOSU31_03320 PF03480 Bacterial extracellular solute-binding protein, family 7 SynBIOSU31_03322 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component SynBIOSU31_03323 PF00753 Metallo-beta-lactamase superfamily SynBIOSU31_03323 PF01613 Flavin reductase like domain SynBIOSU31_03327 PF01613 Flavin reductase like domain SynBIOSU31_03327 PF00258 Flavodoxin SynBIOSU31_03332 PF02347 Glycine cleavage system P-protein SynBIOSU31_03333 PF01597 Glycine cleavage H-protein SynBIOSU31_03334 PF06838 Methionine gamma-lyase SynBIOSU31_03338 PF01281 Ribosomal protein L9, N-terminal domain SynBIOSU31_03338 PF03948 Ribosomal protein L9, C-terminal domain SynBIOSU31_03339 PF03796 DnaB-like helicase C terminal domain SynBIOSU31_03339 PF03796 DnaB-like helicase C terminal domain SynBIOSU31_03339 PF14528 LAGLIDADG-like domain SynBIOSU31_03339 PF00772 DnaB-like helicase N terminal domain SynBIOSU31_03339 PF14528 LAGLIDADG-like domain SynBIOSU31_03339 PF00772 DnaB-like helicase N terminal domain SynBIOSU31_03345 PF01134 Glucose inhibited division protein A SynBIOSU31_03345 PF13932 GidA associated domain SynBIOSU31_03353 PF00533 BRCA1 C Terminus (BRCT) domain SynBIOSU31_03353 PF01653 NAD-dependent DNA ligase adenylation domain SynBIOSU31_03353 PF03120 NAD-dependent DNA ligase OB-fold domain SynBIOSU31_03353 PF03119 NAD-dependent DNA ligase C4 zinc finger domain SynBIOSU31_03353 PF12826 Helix-hairpin-helix motif SynBIOSU31_03356 PF09335 SNARE associated Golgi protein SynBIOSU31_03358 PF05552 Conserved TM helix SynBIOSU31_03358 PF00924 Mechanosensitive ion channel SynBIOSU31_03359 PF00924 Mechanosensitive ion channel SynBIOSU31_03365 PF00005 ABC transporter SynBIOSU31_03366 PF10458 Valyl tRNA synthetase tRNA binding arm SynBIOSU31_03366 PF08264 Anticodon-binding domain of tRNA SynBIOSU31_03366 PF00133 tRNA synthetases class I (I, L, M and V) SynBIOSU31_03368 PF12795 Mechanosensitive ion channel porin domain SynBIOSU31_03368 PF12794 Mechanosensitive ion channel inner membrane domain 1 SynBIOSU31_03368 PF00924 Mechanosensitive ion channel SynBIOSU31_03372 PF00106 short chain dehydrogenase SynBIOSU31_03378 PF00762 Ferrochelatase SynBIOSU31_03389 PF00072 Response regulator receiver domain SynBIOSU31_03389 PF00486 Transcriptional regulatory protein, C terminal SynBIOSU31_03391 PF00989 PAS fold SynBIOSU31_03391 PF16736 Single Cache-like SynBIOSU31_03391 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SynBIOSU31_03391 PF00512 His Kinase A (phospho-acceptor) domain SynBIOSU31_03395 PF00124 Photosynthetic reaction centre protein SynBIOSU31_03397 PF00762 Ferrochelatase SynBIOSU31_03401 PF03819 MazG nucleotide pyrophosphohydrolase domain SynBIOSU31_03405 PF17284 Spermidine synthase tetramerisation domain SynBIOSU31_03406 PF00491 Arginase family SynBIOSU31_03409 PF08669 Glycine cleavage T-protein C-terminal barrel domain SynBIOSU31_03409 PF01571 Aminomethyltransferase folate-binding domain SynBIOSU31_03410 PF02938 GAD domain SynBIOSU31_03410 PF00152 tRNA synthetases class II (D, K and N) SynBIOSU31_03410 PF01336 OB-fold nucleic acid binding domain SynBIOSU31_03411 PF04539 Sigma-70 region 3 SynBIOSU31_03411 PF04542 Sigma-70 region 2 SynBIOSU31_03411 PF04545 Sigma-70, region 4 SynBIOSU31_03411 PF00140 Sigma-70 factor, region 1.2 SynBIOSU31_03412 PF00210 Ferritin-like domain SynBIOSU31_03413 PF06418 CTP synthase N-terminus SynBIOSU31_03413 PF00117 Glutamine amidotransferase class-I SynBIOSU31_03414 PF04055 Radical SAM superfamily SynBIOSU31_03415 PF01551 Peptidase family M23 SynBIOSU31_03416 PF03974 Ecotin SynBIOSU31_03417 PF06508 Queuosine biosynthesis protein QueC SynBIOSU31_03418 PF04715 Anthranilate synthase component I, N terminal region SynBIOSU31_03418 PF00425 chorismate binding enzyme SynBIOSU31_03421 PF00128 Alpha amylase, catalytic domain SynBIOSU31_03423 PF00449 Urease alpha-subunit, N-terminal domain SynBIOSU31_03423 PF01979 Amidohydrolase family SynBIOSU31_03424 PF02540 NAD synthase SynBIOSU31_03424 PF00117 Glutamine amidotransferase class-I SynBIOSU31_03424 PF00958 GMP synthase C terminal domain SynBIOSU31_03427 PF06463 Molybdenum Cofactor Synthesis C SynBIOSU31_03427 PF04055 Radical SAM superfamily SynBIOSU31_03428 PF12804 MobA-like NTP transferase domain SynBIOSU31_03430 PF07690 Major Facilitator Superfamily SynBIOSU31_03431 PF00384 Molybdopterin oxidoreductase SynBIOSU31_03431 PF01568 Molydopterin dinucleotide binding domain SynBIOSU31_03431 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SynBIOSU31_03435 PF01967 MoaC family SynBIOSU31_03436 PF00994 Probable molybdopterin binding domain SynBIOSU31_03436 PF03454 MoeA C-terminal region (domain IV) SynBIOSU31_03436 PF03453 MoeA N-terminal region (domain I and II) SynBIOSU31_03437 PF02391 MoaE protein SynBIOSU31_03438 PF02597 ThiS family SynBIOSU31_03439 PF00994 Probable molybdopterin binding domain SynBIOSU31_03440 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SynBIOSU31_03442 PF01077 Nitrite and sulphite reductase 4Fe-4S domain SynBIOSU31_03442 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain SynBIOSU31_03444 PF01226 Formate/nitrite transporter SynBIOSU31_03446 PF02560 Cyanate lyase C-terminal domain SynBIOSU31_03449 PF00591 Glycosyl transferase family, a/b domain SynBIOSU31_03449 PF02885 Glycosyl transferase family, helical bundle domain SynBIOSU31_03451 PF07690 Major Facilitator Superfamily SynBIOSU31_03452 PF13089 Polyphosphate kinase N-terminal domain SynBIOSU31_03452 PF17941 Polyphosphate kinase C-terminal domain 1 SynBIOSU31_03452 PF13090 Polyphosphate kinase C-terminal domain 2 SynBIOSU31_03452 PF02503 Polyphosphate kinase middle domain SynBIOSU31_03453 PF00140 Sigma-70 factor, region 1.2 SynBIOSU31_03453 PF04542 Sigma-70 region 2 SynBIOSU31_03453 PF04539 Sigma-70 region 3 SynBIOSU31_03453 PF04545 Sigma-70, region 4 SynBIOSU31_03455 PF00793 DAHP synthetase I family SynBIOSU31_03456 PF11791 Aconitate B N-terminal domain SynBIOSU31_03456 PF00330 Aconitase family (aconitate hydratase) SynBIOSU31_03456 PF06434 Aconitate hydratase 2 N-terminus SynBIOSU31_03457 PF00654 Voltage gated chloride channel SynBIOSU31_03460 PF01842 ACT domain SynBIOSU31_03460 PF00551 Formyl transferase SynBIOSU31_03463 PF01266 FAD dependent oxidoreductase SynBIOSU31_03463 PF05690 Thiazole biosynthesis protein ThiG SynBIOSU31_03464 PF12849 PBP superfamily domain SynBIOSU31_03465 PF00012 Hsp70 protein SynBIOSU31_03466 PF01488 Shikimate / quinate 5-dehydrogenase SynBIOSU31_03466 PF18317 Shikimate 5'-dehydrogenase C-terminal domain SynBIOSU31_03466 PF08501 Shikimate dehydrogenase substrate binding domain SynBIOSU31_03467 PF16166 Chloroplast import apparatus Tic20-like SynBIOSU31_03468 PF01250 Ribosomal protein S6 SynBIOSU31_03470 PF00764 Arginosuccinate synthase SynBIOSU31_03473 PF00953 Glycosyl transferase family 4 SynBIOSU31_03473 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 SynBIOSU31_03476 PF02222 ATP-grasp domain SynBIOSU31_03477 PF00534 Glycosyl transferases group 1 SynBIOSU31_03477 PF00862 Sucrose synthase SynBIOSU31_03479 PF17760 UvrA interaction domain SynBIOSU31_03479 PF17755 UvrA DNA-binding domain SynBIOSU31_03480 PF02463 RecF/RecN/SMC N terminal domain SynBIOSU31_03481 PF03109 ABC1 family SynBIOSU31_03483 PF00291 Pyridoxal-phosphate dependent enzyme SynBIOSU31_50002 PF05151 Photosystem II reaction centre M protein (PsbM)