locus-tag class description sync_0001 PF02768 DNA polymerase III beta subunit, C-terminal domain sync_0001 PF02767 DNA polymerase III beta subunit, central domain sync_0001 PF00712 DNA polymerase III beta subunit, N-terminal domain sync_0003 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain sync_0003 PF02769 AIR synthase related protein, C-terminal domain sync_0003 PF00586 AIR synthase related protein, N-terminal domain sync_0004 PF13537 Glutamine amidotransferase domain sync_0004 PF00156 Phosphoribosyl transferase domain sync_0005 PF00521 DNA gyrase/topoisomerase IV, subunit A sync_0005 PF03989 DNA gyrase C-terminal domain, beta-propeller sync_0007 PF08331 Domain of unknown function (DUF1730) sync_0010 PF01029 NusB family sync_0011 PF02881 SRP54-type protein, helical bundle domain sync_0011 PF00448 SRP54-type protein, GTPase domain sync_0012 PF07228 Stage II sporulation protein E (SpoIIE) sync_0012 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain sync_0013 PF14698 Argininosuccinate lyase C-terminal sync_0013 PF00206 Lyase sync_0014 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) sync_0015 PF01207 Dihydrouridine synthase (Dus) sync_0016 PF01641 SelR domain sync_0019 PF00482 Type II secretion system (T2SS), protein F sync_0020 PF00437 Type II/IV secretion system protein sync_0021 PF00437 Type II/IV secretion system protein sync_0022 PF01025 GrpE sync_0023 PF01556 DnaJ C terminal domain sync_0023 PF00684 DnaJ central domain sync_0023 PF00226 DnaJ domain sync_0025 PF03193 RsgA GTPase sync_0026 PF02575 YbaB/EbfC DNA-binding family sync_0027 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain sync_0027 PF01565 FAD binding domain sync_0028 PF02875 Mur ligase family, glutamate ligase domain sync_0028 PF08245 Mur ligase middle domain sync_0028 PF01225 Mur ligase family, catalytic domain sync_0029 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain sync_0029 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain sync_0030 PF00586 AIR synthase related protein, N-terminal domain sync_0030 PF02769 AIR synthase related protein, C-terminal domain sync_0031 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD sync_0032 PF09285 Elongation factor P, C-terminal sync_0032 PF08207 Elongation factor P (EF-P) KOW-like domain sync_0032 PF01132 Elongation factor P (EF-P) OB domain sync_0033 PF00364 Biotin-requiring enzyme sync_0034 PF04166 Pyridoxal phosphate biosynthetic protein PdxA sync_0038 PF00176 SNF2 family N-terminal domain sync_0038 PF04434 SWIM zinc finger sync_0038 PF00271 Helicase conserved C-terminal domain sync_0045 PF00266 Aminotransferase class-V sync_0046 PF01888 CbiD sync_0047 PF00958 GMP synthase C terminal domain sync_0047 PF00117 Glutamine amidotransferase class-I sync_0051 PF00905 Penicillin binding protein transpeptidase domain sync_0051 PF03717 Penicillin-binding Protein dimerisation domain sync_0052 PF00534 Glycosyl transferases group 1 sync_0052 PF13439 Glycosyltransferase Family 4 sync_0053 PF16363 GDP-mannose 4,6 dehydratase sync_0055 PF05690 Thiazole biosynthesis protein ThiG sync_0058 PF00453 Ribosomal protein L20 sync_0059 PF01632 Ribosomal protein L35 sync_0060 PF08486 Stage II sporulation protein sync_0062 PF12169 DNA polymerase III subunits gamma and tau domain III sync_0064 PF06689 ClpX C4-type zinc finger sync_0064 PF10431 C-terminal, D2-small domain, of ClpB protein sync_0064 PF07724 AAA domain (Cdc48 subfamily) sync_0065 PF00574 Clp protease sync_0066 PF05698 Bacterial trigger factor protein (TF) C-terminus sync_0066 PF05697 Bacterial trigger factor protein (TF) sync_0066 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase sync_0067 PF01118 Semialdehyde dehydrogenase, NAD binding domain sync_0067 PF02774 Semialdehyde dehydrogenase, dimerisation domain sync_0068 PF00701 Dihydrodipicolinate synthetase family sync_0069 PF17770 Ribonuclease J C-terminal domain sync_0069 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain sync_0069 PF00753 Metallo-beta-lactamase superfamily sync_0071 PF09179 TilS substrate binding domain sync_0071 PF01171 PP-loop family sync_0074 PF12344 Ultra-violet resistance protein B sync_0074 PF02151 UvrB/uvrC motif sync_0074 PF17757 UvrB interaction domain sync_0074 PF00271 Helicase conserved C-terminal domain sync_0074 PF04851 Type III restriction enzyme, res subunit sync_0075 PF00696 Amino acid kinase family sync_0075 PF13840 ACT domain sync_0078 PF02570 Precorrin-8X methylmutase sync_0079 PF05190 MutS family domain IV sync_0079 PF05192 MutS domain III sync_0079 PF01624 MutS domain I sync_0079 PF00488 MutS domain V sync_0079 PF05188 MutS domain II sync_0080 PF01737 YCF9 sync_0081 PF00885 6,7-dimethyl-8-ribityllumazine synthase sync_0085 PF13439 Glycosyltransferase Family 4 sync_0086 PF01043 SecA preprotein cross-linking domain sync_0086 PF07517 SecA DEAD-like domain sync_0086 PF07516 SecA Wing and Scaffold domain sync_0087 PF00132 Bacterial transferase hexapeptide (six repeats) sync_0087 PF06426 Serine acetyltransferase, N-terminal sync_0088 PF00392 Bacterial regulatory proteins, gntR family sync_0090 PF00707 Translation initiation factor IF-3, C-terminal domain sync_0090 PF05198 Translation initiation factor IF-3, N-terminal domain sync_0092 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase sync_0092 PF00986 DNA gyrase B subunit, carboxyl terminus sync_0092 PF01751 Toprim domain sync_0092 PF00204 DNA gyrase B sync_0094 PF02537 CrcB-like protein, Camphor Resistance (CrcB) sync_0095 PF02537 CrcB-like protein, Camphor Resistance (CrcB) sync_0096 PF00255 Glutathione peroxidase sync_0097 PF01769 Divalent cation transporter sync_0097 PF00571 CBS domain sync_0097 PF03448 MgtE intracellular N domain sync_0098 PF00140 Sigma-70 factor, region 1.2 sync_0098 PF04542 Sigma-70 region 2 sync_0098 PF04545 Sigma-70, region 4 sync_0098 PF04539 Sigma-70 region 3 sync_0099 PF12697 Alpha/beta hydrolase family sync_0100 PF00873 AcrB/AcrD/AcrF family sync_0101 PF13533 Biotin-lipoyl like sync_0102 PF00730 HhH-GPD superfamily base excision DNA repair protein sync_0102 PF14815 NUDIX domain sync_0103 PF00294 pfkB family carbohydrate kinase sync_0105 PF03951 Glutamine synthetase, beta-Grasp domain sync_0105 PF00120 Glutamine synthetase, catalytic domain sync_0106 PF00474 Sodium:solute symporter family sync_0107 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE sync_0108 PF05221 S-adenosyl-L-homocysteine hydrolase sync_0108 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain sync_0109 PF09335 SNARE associated Golgi protein sync_0110 PF00436 Single-strand binding protein family sync_0112 PF04085 rod shape-determining protein MreC sync_0115 PF00072 Response regulator receiver domain sync_0115 PF00486 Transcriptional regulatory protein, C terminal sync_0116 PF01336 OB-fold nucleic acid binding domain sync_0116 PF00152 tRNA synthetases class II (D, K and N) sync_0120 PF10017 Histidine-specific methyltransferase, SAM-dependent sync_0121 PF03781 Sulfatase-modifying factor enzyme 1 sync_0121 PF12867 DinB superfamily sync_0122 PF00069 Protein kinase domain sync_0122 PF00805 Pentapeptide repeats (8 copies) sync_0123 PF01668 SmpB protein sync_0124 PF05496 Holliday junction DNA helicase RuvB P-loop domain sync_0124 PF17864 RuvB AAA lid domain sync_0124 PF05491 RuvB C-terminal winged helix domain sync_0126 PF01546 Peptidase family M20/M25/M40 sync_0126 PF07687 Peptidase dimerisation domain sync_0129 PF01964 Radical SAM ThiC family sync_0130 PF02780 Transketolase, C-terminal domain sync_0130 PF02779 Transketolase, pyrimidine binding domain sync_0130 PF00456 Transketolase, thiamine diphosphate binding domain sync_0131 PF02801 Beta-ketoacyl synthase, C-terminal domain sync_0131 PF00109 Beta-ketoacyl synthase, N-terminal domain sync_0132 PF00550 Phosphopantetheine attachment site sync_0133 PF12838 4Fe-4S dicluster domain sync_0134 PF01380 SIS domain sync_0135 PF01850 PIN domain sync_0139 PF00535 Glycosyl transferase family 2 sync_0145 PF01370 NAD dependent epimerase/dehydratase family sync_0146 PF16363 GDP-mannose 4,6 dehydratase sync_0147 PF02397 Bacterial sugar transferase sync_0149 PF18412 Outer-membrane lipoprotein Wza C-terminal domain sync_0149 PF02563 Polysaccharide biosynthesis/export protein sync_0149 PF10531 SLBB domain sync_0150 PF13614 AAA domain sync_0151 PF00782 Dual specificity phosphatase, catalytic domain sync_0156 PF00550 Phosphopantetheine attachment site sync_0156 PF08659 KR domain sync_0156 PF02801 Beta-ketoacyl synthase, C-terminal domain sync_0156 PF00109 Beta-ketoacyl synthase, N-terminal domain sync_0156 PF00698 Acyl transferase domain sync_0156 PF16197 Ketoacyl-synthetase C-terminal extension sync_0156 PF08240 Alcohol dehydrogenase GroES-like domain sync_0156 PF14765 Polyketide synthase dehydratase sync_0159 PF16363 GDP-mannose 4,6 dehydratase sync_0160 PF00483 Nucleotidyl transferase sync_0160 PF01050 Mannose-6-phosphate isomerase sync_0169 PF02350 UDP-N-acetylglucosamine 2-epimerase sync_0170 PF02348 Cytidylyltransferase sync_0174 PF08666 SAF domain sync_0174 PF03102 NeuB family sync_0176 PF00977 Histidine biosynthesis protein sync_0178 PF13537 Glutamine amidotransferase domain sync_0178 PF00733 Asparagine synthase sync_0179 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family sync_0181 PF03102 NeuB family sync_0181 PF08666 SAF domain sync_0182 PF02348 Cytidylyltransferase sync_0183 PF02397 Bacterial sugar transferase sync_0192 PF02719 Polysaccharide biosynthesis protein sync_0194 PF03600 Citrate transporter sync_0194 PF02080 TrkA-C domain sync_0195 PF05239 PRC-barrel domain sync_0195 PF01782 RimM N-terminal domain sync_0197 PF00027 Cyclic nucleotide-binding domain sync_0197 PF00520 Ion transport protein sync_0200 PF14622 Ribonuclease-III-like sync_0200 PF00035 Double-stranded RNA binding motif sync_0202 PF01741 Large-conductance mechanosensitive channel, MscL sync_0205 PF00343 Carbohydrate phosphorylase sync_0206 PF00999 Sodium/hydrogen exchanger family sync_0208 PF12697 Alpha/beta hydrolase family sync_0210 PF01565 FAD binding domain sync_0213 PF02754 Cysteine-rich domain sync_0213 PF13183 4Fe-4S dicluster domain sync_0214 PF00180 Isocitrate/isopropylmalate dehydrogenase sync_0216 PF01126 Heme oxygenase sync_0219 PF00005 ABC transporter sync_0219 PF00664 ABC transporter transmembrane region sync_0221 PF13439 Glycosyltransferase Family 4 sync_0221 PF00534 Glycosyl transferases group 1 sync_0222 PF13439 Glycosyltransferase Family 4 sync_0222 PF00534 Glycosyl transferases group 1 sync_0223 PF13439 Glycosyltransferase Family 4 sync_0223 PF00534 Glycosyl transferases group 1 sync_0227 PF00580 UvrD/REP helicase N-terminal domain sync_0227 PF13361 UvrD-like helicase C-terminal domain sync_0228 PF13735 tRNA nucleotidyltransferase domain 2 putative sync_0228 PF01743 Poly A polymerase head domain sync_0228 PF12627 Probable RNA and SrmB- binding site of polymerase A sync_0230 PF02769 AIR synthase related protein, C-terminal domain sync_0230 PF00586 AIR synthase related protein, N-terminal domain sync_0231 PF16363 GDP-mannose 4,6 dehydratase sync_0232 PF03129 Anticodon binding domain sync_0232 PF13393 Histidyl-tRNA synthetase sync_0233 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain sync_0233 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain sync_0233 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain sync_0234 PF01370 NAD dependent epimerase/dehydratase family sync_0236 PF01788 PsbJ sync_0237 PF02419 PsbL protein sync_0238 PF00283 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits sync_0239 PF00283 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits sync_0239 PF00284 Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit sync_0240 PF14870 Photosynthesis system II assembly factor YCF48 sync_0241 PF00301 Rubredoxin sync_0242 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 sync_0243 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit sync_0244 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit sync_0245 PF01933 Uncharacterised protein family UPF0052 sync_0246 PF08402 TOBE domain sync_0246 PF00005 ABC transporter sync_0247 PF02470 MlaD protein sync_0248 PF17863 AAA lid domain sync_0248 PF01078 Magnesium chelatase, subunit ChlI sync_0248 PF13519 von Willebrand factor type A domain sync_0249 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) sync_0251 PF00293 NUDIX domain sync_0252 PF00875 DNA photolyase sync_0252 PF03441 FAD binding domain of DNA photolyase sync_0253 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family sync_0259 PF01062 Bestrophin, RFP-TM, chloride channel sync_0260 PF00475 Imidazoleglycerol-phosphate dehydratase sync_0261 PF03055 Retinal pigment epithelial membrane protein sync_0263 PF00512 His Kinase A (phospho-acceptor) domain sync_0263 PF00672 HAMP domain sync_0263 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase sync_0265 PF00072 Response regulator receiver domain sync_0265 PF00486 Transcriptional regulatory protein, C terminal sync_0268 PF02028 BCCT, betaine/carnitine/choline family transporter sync_0272 PF01725 Ham1 family sync_0273 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain sync_0273 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III sync_0273 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I sync_0273 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II sync_0275 PF08669 Glycine cleavage T-protein C-terminal barrel domain sync_0275 PF01571 Aminomethyltransferase folate-binding domain sync_0279 PF01595 Cyclin M transmembrane N-terminal domain sync_0279 PF03471 Transporter associated domain sync_0279 PF00571 CBS domain sync_0280 PF02894 Oxidoreductase family, C-terminal alpha/beta domain sync_0280 PF01408 Oxidoreductase family, NAD-binding Rossmann fold sync_0282 PF03808 Glycosyl transferase WecB/TagA/CpsF family sync_0283 PF02533 Photosystem II 4 kDa reaction centre component sync_0284 PF01702 Queuine tRNA-ribosyltransferase sync_0285 PF02654 Cobalamin-5-phosphate synthase sync_0286 PF07689 KaiB domain sync_0286 PF00512 His Kinase A (phospho-acceptor) domain sync_0286 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase sync_0289 PF01808 AICARFT/IMPCHase bienzyme sync_0289 PF02142 MGS-like domain sync_0292 PF02401 LytB protein sync_0293 PF00909 Ammonium Transporter Family sync_0294 PF17746 SfsA N-terminal OB domain sync_0294 PF03749 Sugar fermentation stimulation protein RE domain sync_0295 PF03023 Lipid II flippase MurJ sync_0300 PF00464 Serine hydroxymethyltransferase sync_0301 PF00953 Glycosyl transferase family 4 sync_0302 PF00994 Probable molybdopterin binding domain sync_0302 PF18146 Damage-inducible protein CinA KH domain sync_0302 PF02464 Competence-damaged protein sync_0303 PF00330 Aconitase family (aconitate hydratase) sync_0304 PF00694 Aconitase C-terminal domain sync_0307 PF02532 Photosystem II reaction centre I protein (PSII 4.8 kDa protein) sync_0309 PF02468 Photosystem II reaction centre N protein (psbN) sync_0310 PF00737 Photosystem II 10 kDa phosphoprotein sync_0311 PF02416 mttA/Hcf106 family sync_0312 PF01195 Peptidyl-tRNA hydrolase sync_0315 PF11283 Protein of unknown function (DUF3084) sync_0316 PF00027 Cyclic nucleotide-binding domain sync_0316 PF13545 Crp-like helix-turn-helix domain sync_0317 PF03725 3' exoribonuclease family, domain 2 sync_0317 PF01138 3' exoribonuclease family, domain 1 sync_0319 PF00692 dUTPase sync_0321 PF00085 Thioredoxin sync_0323 PF14718 Soluble lytic murein transglycosylase L domain sync_0323 PF01464 Transglycosylase SLT domain sync_0325 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I sync_0325 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III sync_0325 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II sync_0325 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain sync_0328 PF02390 Putative methyltransferase sync_0333 PF08264 Anticodon-binding domain of tRNA sync_0333 PF00133 tRNA synthetases class I (I, L, M and V) sync_0333 PF06827 Zinc finger found in FPG and IleRS sync_0337 PF02686 Glu-tRNAGln amidotransferase C subunit sync_0338 PF02633 Creatinine amidohydrolase sync_0340 PF02592 Putative vitamin uptake transporter sync_0342 PF02245 Methylpurine-DNA glycosylase (MPG) sync_0343 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain sync_0343 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain sync_0351 PF10742 Protein of unknown function (DUF2555) sync_0352 PF04127 DNA / pantothenate metabolism flavoprotein sync_0352 PF02441 Flavoprotein sync_0353 PF01716 Manganese-stabilising protein / photosystem II polypeptide sync_0354 PF14306 PUA-like domain sync_0354 PF01747 ATP-sulfurylase sync_0355 PF01434 Peptidase family M41 sync_0355 PF06480 FtsH Extracellular sync_0355 PF17862 AAA+ lid domain sync_0355 PF00004 ATPase family associated with various cellular activities (AAA) sync_0358 PF01264 Chorismate synthase sync_0360 PF00535 Glycosyl transferase family 2 sync_0361 PF00128 Alpha amylase, catalytic domain sync_0364 PF00156 Phosphoribosyl transferase domain sync_0364 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family sync_0368 PF00124 Photosynthetic reaction centre protein sync_0369 PF00919 Uncharacterized protein family UPF0004 sync_0369 PF18693 TRAM domain sync_0369 PF04055 Radical SAM superfamily sync_0371 PF02617 ATP-dependent Clp protease adaptor protein ClpS sync_0372 PF00155 Aminotransferase class I and II sync_0374 PF10150 Ribonuclease E/G family sync_0375 PF01351 Ribonuclease HII sync_0377 PF00800 Prephenate dehydratase sync_0377 PF01842 ACT domain sync_0377 PF01817 Chorismate mutase type II sync_0378 PF08241 Methyltransferase domain sync_0379 PF00004 ATPase family associated with various cellular activities (AAA) sync_0379 PF05362 Lon protease (S16) C-terminal proteolytic domain sync_0379 PF02190 ATP-dependent protease La (LON) substrate-binding domain sync_0380 PF00338 Ribosomal protein S10p/S20e sync_0381 PF03143 Elongation factor Tu C-terminal domain sync_0381 PF03144 Elongation factor Tu domain 2 sync_0381 PF00009 Elongation factor Tu GTP binding domain sync_0382 PF14492 Elongation Factor G, domain II sync_0382 PF00679 Elongation factor G C-terminus sync_0382 PF03144 Elongation factor Tu domain 2 sync_0382 PF03764 Elongation factor G, domain IV sync_0382 PF00009 Elongation factor Tu GTP binding domain sync_0383 PF00177 Ribosomal protein S7p/S5e sync_0384 PF00164 Ribosomal protein S12/S23 sync_0387 PF01493 GXGXG motif sync_0387 PF00310 Glutamine amidotransferases class-II sync_0387 PF04898 Glutamate synthase central domain sync_0387 PF01645 Conserved region in glutamate synthase sync_0389 PF04055 Radical SAM superfamily sync_0391 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases sync_0393 PF00223 Photosystem I psaA/psaB protein sync_0394 PF00223 Photosystem I psaA/psaB protein sync_0396 PF00487 Fatty acid desaturase sync_0397 PF00873 AcrB/AcrD/AcrF family sync_0398 PF02605 Photosystem I reaction centre subunit XI sync_0399 PF00796 Photosystem I reaction centre subunit VIII sync_0401 PF00535 Glycosyl transferase family 2 sync_0406 PF01168 Alanine racemase, N-terminal domain sync_0406 PF00842 Alanine racemase, C-terminal domain sync_0408 PF00472 RF-1 domain sync_0408 PF03462 PCRF domain sync_0409 PF01197 Ribosomal protein L31 sync_0410 PF00380 Ribosomal protein S9/S16 sync_0411 PF00572 Ribosomal protein L13 sync_0412 PF01416 tRNA pseudouridine synthase sync_0413 PF01196 Ribosomal protein L17 sync_0414 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain sync_0414 PF01000 RNA polymerase Rpb3/RpoA insert domain sync_0414 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain sync_0415 PF00411 Ribosomal protein S11 sync_0416 PF00416 Ribosomal protein S13/S18 sync_0417 PF00444 Ribosomal protein L36 sync_0419 PF00344 SecY translocase sync_0420 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A sync_0421 PF03719 Ribosomal protein S5, C-terminal domain sync_0421 PF00333 Ribosomal protein S5, N-terminal domain sync_0422 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast sync_0423 PF00347 Ribosomal protein L6 sync_0424 PF00410 Ribosomal protein S8 sync_0425 PF00673 ribosomal L5P family C-terminus sync_0425 PF00281 Ribosomal protein L5 sync_0426 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 sync_0426 PF00467 KOW motif sync_0427 PF00238 Ribosomal protein L14p/L23e sync_0428 PF00366 Ribosomal protein S17 sync_0429 PF00831 Ribosomal L29 protein sync_0430 PF00252 Ribosomal protein L16p/L10e sync_0431 PF07650 KH domain sync_0431 PF00189 Ribosomal protein S3, C-terminal domain sync_0432 PF00237 Ribosomal protein L22p/L17e sync_0433 PF00203 Ribosomal protein S19 sync_0434 PF03947 Ribosomal Proteins L2, C-terminal domain sync_0434 PF00181 Ribosomal Proteins L2, RNA binding domain sync_0435 PF00276 Ribosomal protein L23 sync_0436 PF00573 Ribosomal protein L4/L1 family sync_0437 PF00297 Ribosomal protein L3 sync_0438 PF11909 NADH-quinone oxidoreductase cyanobacterial subunit N sync_0443 PF00154 recA bacterial DNA recombination protein sync_0447 PF02153 Prephenate dehydrogenase sync_0448 PF01593 Flavin containing amine oxidoreductase sync_0452 PF00581 Rhodanese-like domain sync_0452 PF00899 ThiF family sync_0453 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP sync_0454 PF02540 NAD synthase sync_0455 PF00282 Pyridoxal-dependent decarboxylase conserved domain sync_0456 PF02675 S-adenosylmethionine decarboxylase sync_0457 PF02463 RecF/RecN/SMC N terminal domain sync_0460 PF00311 Phosphoenolpyruvate carboxylase sync_0462 PF04715 Anthranilate synthase component I, N terminal region sync_0462 PF00425 chorismate binding enzyme sync_0463 PF02531 PsaD sync_0464 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase sync_0464 PF00672 HAMP domain sync_0464 PF00512 His Kinase A (phospho-acceptor) domain sync_0465 PF01098 Cell cycle protein sync_0466 PF01883 Iron-sulfur cluster assembly protein sync_0466 PF10609 NUBPL iron-transfer P-loop NTPase sync_0467 PF01218 Coproporphyrinogen III oxidase sync_0476 PF00520 Ion transport protein sync_0476 PF00027 Cyclic nucleotide-binding domain sync_0479 PF00248 Aldo/keto reductase family sync_0481 PF02769 AIR synthase related protein, C-terminal domain sync_0481 PF00586 AIR synthase related protein, N-terminal domain sync_0482 PF03330 Lytic transglycolase sync_0483 PF02569 Pantoate-beta-alanine ligase sync_0483 PF02224 Cytidylate kinase sync_0484 PF01451 Low molecular weight phosphotyrosine protein phosphatase sync_0486 PF03130 PBS lyase HEAT-like repeat sync_0487 PF06206 CpeT/CpcT family (DUF1001) sync_0488 PF00502 Phycobilisome protein sync_0489 PF00502 Phycobilisome protein sync_0490 PF05996 Ferredoxin-dependent bilin reductase sync_0491 PF05996 Ferredoxin-dependent bilin reductase sync_0492 PF09367 CpeS-like protein sync_0495 PF00502 Phycobilisome protein sync_0496 PF00502 Phycobilisome protein sync_0498 PF10847 Protein of unknown function (DUF2656) sync_0502 PF00427 Phycobilisome Linker polypeptide sync_0504 PF00502 Phycobilisome protein sync_0505 PF00502 Phycobilisome protein sync_0509 PF06206 CpeT/CpcT family (DUF1001) sync_0510 PF09367 CpeS-like protein sync_0511 PF01383 CpcD/allophycocyanin linker domain sync_0511 PF00427 Phycobilisome Linker polypeptide sync_0512 PF00427 Phycobilisome Linker polypeptide sync_0513 PF01383 CpcD/allophycocyanin linker domain sync_0513 PF00427 Phycobilisome Linker polypeptide sync_0515 PF00427 Phycobilisome Linker polypeptide sync_0516 PF00427 Phycobilisome Linker polypeptide sync_0528 PF02782 FGGY family of carbohydrate kinases, C-terminal domain sync_0529 PF02772 S-adenosylmethionine synthetase, central domain sync_0529 PF02773 S-adenosylmethionine synthetase, C-terminal domain sync_0529 PF00438 S-adenosylmethionine synthetase, N-terminal domain sync_0531 PF00575 S1 RNA binding domain sync_0532 PF03477 ATP cone domain sync_0533 PF01405 Photosystem II reaction centre T protein sync_0534 PF00421 Photosystem II protein sync_0536 PF05151 Photosystem II reaction centre M protein (PsbM) sync_0537 PF00582 Universal stress protein family sync_0540 PF05175 Methyltransferase small domain sync_0541 PF01300 Telomere recombination sync_0544 PF03776 Septum formation topological specificity factor MinE sync_0545 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain sync_0546 PF03775 Septum formation inhibitor MinC, C-terminal domain sync_0547 PF01966 HD domain sync_0548 PF03572 Peptidase family S41 sync_0548 PF00595 PDZ domain sync_0549 PF00033 Cytochrome b/b6/petB sync_0550 PF00032 Cytochrome b(C-terminal)/b6/petD sync_0559 PF00916 Sulfate permease family sync_0559 PF01740 STAS domain sync_0561 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain sync_0561 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain sync_0561 PF06827 Zinc finger found in FPG and IleRS sync_0562 PF02427 Photosystem I reaction centre subunit IV / PsaE sync_0564 PF00570 HRDC domain sync_0564 PF16124 RecQ zinc-binding sync_0564 PF00270 DEAD/DEAH box helicase sync_0564 PF00271 Helicase conserved C-terminal domain sync_0564 PF09382 RQC domain sync_0565 PF01476 LysM domain sync_0565 PF05257 CHAP domain sync_0566 PF00171 Aldehyde dehydrogenase family sync_0567 PF16657 Maltogenic Amylase, C-terminal domain sync_0567 PF00128 Alpha amylase, catalytic domain sync_0568 PF16901 C-terminal domain of alpha-glycerophosphate oxidase sync_0568 PF01266 FAD dependent oxidoreductase sync_0569 PF02782 FGGY family of carbohydrate kinases, C-terminal domain sync_0569 PF00370 FGGY family of carbohydrate kinases, N-terminal domain sync_0570 PF02903 Alpha amylase, N-terminal ig-like domain sync_0570 PF16657 Maltogenic Amylase, C-terminal domain sync_0570 PF00128 Alpha amylase, catalytic domain sync_0578 PF01220 Dehydroquinase class II sync_0586 PF00072 Response regulator receiver domain sync_0586 PF00196 Bacterial regulatory proteins, luxR family sync_0589 PF03079 ARD/ARD' family sync_0590 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases sync_0592 PF07238 PilZ domain sync_0592 PF03170 Bacterial cellulose synthase subunit sync_0592 PF00535 Glycosyl transferase family 2 sync_0593 PF01207 Dihydrouridine synthase (Dus) sync_0595 PF03734 L,D-transpeptidase catalytic domain sync_0596 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal sync_0596 PF01926 50S ribosome-binding GTPase sync_0597 PF02361 Cobalt transport protein sync_0599 PF01168 Alanine racemase, N-terminal domain sync_0600 PF04472 Cell division protein SepF sync_0601 PF14748 Pyrroline-5-carboxylate reductase dimerisation sync_0601 PF03807 NADP oxidoreductase coenzyme F420-dependent sync_0602 PF00534 Glycosyl transferases group 1 sync_0602 PF13439 Glycosyltransferase Family 4 sync_0604 PF11967 Recombination protein O N terminal sync_0604 PF02565 Recombination protein O C terminal sync_0606 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein sync_0606 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus sync_0607 PF03099 Biotin/lipoate A/B protein ligase family sync_0608 PF00501 AMP-binding enzyme sync_0617 PF02817 e3 binding domain sync_0617 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) sync_0617 PF00364 Biotin-requiring enzyme sync_0618 PF13520 Amino acid permease sync_0619 PF02547 Queuosine biosynthesis protein sync_0620 PF00291 Pyridoxal-phosphate dependent enzyme sync_0622 PF01053 Cys/Met metabolism PLP-dependent enzyme sync_0623 PF01053 Cys/Met metabolism PLP-dependent enzyme sync_0629 PF00163 Ribosomal protein S4/S9 N-terminal domain sync_0629 PF01479 S4 domain sync_0630 PF01809 Putative membrane protein insertion efficiency factor sync_0632 PF08245 Mur ligase middle domain sync_0632 PF02875 Mur ligase family, glutamate ligase domain sync_0632 PF01225 Mur ligase family, catalytic domain sync_0633 PF01699 Sodium/calcium exchanger protein sync_0636 PF00266 Aminotransferase class-V sync_0647 PF01106 NifU-like domain sync_0648 PF06039 Malate:quinone oxidoreductase (Mqo) sync_0649 PF00465 Iron-containing alcohol dehydrogenase sync_0651 PF00893 Small Multidrug Resistance protein sync_0652 PF00679 Elongation factor G C-terminus sync_0652 PF03144 Elongation factor Tu domain 2 sync_0652 PF06421 GTP-binding protein LepA C-terminus sync_0652 PF00009 Elongation factor Tu GTP binding domain sync_0659 PF14245 Type IV pilin PilA sync_0659 PF07963 Prokaryotic N-terminal methylation motif sync_0667 PF07963 Prokaryotic N-terminal methylation motif sync_0667 PF00114 Pilin (bacterial filament) sync_0668 PF00512 His Kinase A (phospho-acceptor) domain sync_0668 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase sync_0668 PF00672 HAMP domain sync_0669 PF00072 Response regulator receiver domain sync_0669 PF00486 Transcriptional regulatory protein, C terminal sync_0675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase sync_0675 PF00672 HAMP domain sync_0675 PF18698 Histidine kinase sensor domain sync_0675 PF00989 PAS fold sync_0675 PF00512 His Kinase A (phospho-acceptor) domain sync_0678 PF00395 S-layer homology domain sync_0678 PF04966 Carbohydrate-selective porin, OprB family sync_0680 PF00210 Ferritin-like domain sync_0681 PF07670 Nucleoside recognition sync_0681 PF02421 Ferrous iron transport protein B sync_0681 PF07664 Ferrous iron transport protein B C terminus sync_0686 PF16916 Dimerisation domain of Zinc Transporter sync_0686 PF01545 Cation efflux family sync_0689 PF08534 Redoxin sync_0690 PF12105 SpoU, rRNA methylase, C-terminal sync_0690 PF00588 SpoU rRNA Methylase family sync_0693 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain sync_0694 PF01029 NusB family sync_0694 PF01189 16S rRNA methyltransferase RsmB/F sync_0695 PF00912 Transglycosylase sync_0695 PF00905 Penicillin binding protein transpeptidase domain sync_0696 PF01040 UbiA prenyltransferase family sync_0698 PF00977 Histidine biosynthesis protein sync_0700 PF01209 ubiE/COQ5 methyltransferase family sync_0706 PF00672 HAMP domain sync_0706 PF00512 His Kinase A (phospho-acceptor) domain sync_0706 PF00989 PAS fold sync_0706 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase sync_0706 PF18698 Histidine kinase sensor domain sync_0707 PF00486 Transcriptional regulatory protein, C terminal sync_0707 PF00072 Response regulator receiver domain sync_0717 PF02091 Glycyl-tRNA synthetase alpha subunit sync_0723 PF02397 Bacterial sugar transferase sync_0724 PF03186 CobD/Cbib protein sync_0725 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain sync_0725 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain sync_0726 PF00574 Clp protease sync_0727 PF00574 Clp protease sync_0729 PF04055 Radical SAM superfamily sync_0730 PF02548 Ketopantoate hydroxymethyltransferase sync_0731 PF12327 FtsZ family, C-terminal domain sync_0731 PF00091 Tubulin/FtsZ family, GTPase domain sync_0734 PF07478 D-ala D-ala ligase C-terminus sync_0734 PF01820 D-ala D-ala ligase N-terminus sync_0735 PF04055 Radical SAM superfamily sync_0735 PF01938 TRAM domain sync_0735 PF00919 Uncharacterized protein family UPF0004 sync_0736 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain sync_0736 PF13378 Enolase C-terminal domain-like sync_0743 PF02875 Mur ligase family, glutamate ligase domain sync_0743 PF08245 Mur ligase middle domain sync_0744 PF00202 Aminotransferase class-III sync_0746 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) sync_0749 PF08032 RNA 2'-O ribose methyltransferase substrate binding sync_0749 PF00588 SpoU rRNA Methylase family sync_0750 PF07992 Pyridine nucleotide-disulphide oxidoreductase sync_0750 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain sync_0751 PF00218 Indole-3-glycerol phosphate synthase sync_0754 PF10502 Signal peptidase, peptidase S26 sync_0755 PF09055 Nickel-containing superoxide dismutase sync_0756 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase sync_0760 PF01256 Carbohydrate kinase sync_0760 PF03853 YjeF-related protein N-terminus sync_0761 PF00140 Sigma-70 factor, region 1.2 sync_0761 PF04542 Sigma-70 region 2 sync_0761 PF04545 Sigma-70, region 4 sync_0761 PF04539 Sigma-70 region 3 sync_0763 PF00850 Histone deacetylase domain sync_0764 PF00676 Dehydrogenase E1 component sync_0766 PF00448 SRP54-type protein, GTPase domain sync_0766 PF02881 SRP54-type protein, helical bundle domain sync_0766 PF02978 Signal peptide binding domain sync_0767 PF00886 Ribosomal protein S16 sync_0768 PF02562 PhoH-like protein sync_0770 PF00083 Sugar (and other) transporter sync_0772 PF03306 Alpha-acetolactate decarboxylase sync_0773 PF07650 KH domain sync_0773 PF01926 50S ribosome-binding GTPase sync_0775 PF01746 tRNA (Guanine-1)-methyltransferase sync_0781 PF02542 YgbB family sync_0783 PF00731 AIR carboxylase sync_0786 PF05690 Thiazole biosynthesis protein ThiG sync_0786 PF02597 ThiS family sync_0791 PF02581 Thiamine monophosphate synthase sync_0791 PF17792 ThiD2 family sync_0793 PF01687 Riboflavin kinase sync_0793 PF06574 FAD synthetase sync_0795 PF01975 Survival protein SurE sync_0796 PF01409 tRNA synthetases class II core domain (F) sync_0796 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain sync_0804 PF03109 ABC1 family sync_0806 PF01513 ATP-NAD kinase sync_0807 PF00486 Transcriptional regulatory protein, C terminal sync_0807 PF00072 Response regulator receiver domain sync_0810 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases sync_0811 PF12833 Helix-turn-helix domain sync_0821 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region sync_0821 PF01872 RibD C-terminal domain sync_0822 PF00248 Aldo/keto reductase family sync_0825 PF17862 AAA+ lid domain sync_0825 PF06480 FtsH Extracellular sync_0825 PF01434 Peptidase family M41 sync_0825 PF00004 ATPase family associated with various cellular activities (AAA) sync_0826 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain sync_0826 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain sync_0827 PF12697 Alpha/beta hydrolase family sync_0831 PF00717 Peptidase S24-like sync_0831 PF01726 LexA DNA binding domain sync_0859 PF07859 alpha/beta hydrolase fold sync_0861 PF13378 Enolase C-terminal domain-like sync_0861 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain sync_0872 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain sync_0872 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain sync_0874 PF01241 Photosystem I psaG / psaK sync_0878 PF08946 Osmosensory transporter coiled coil sync_0878 PF00083 Sugar (and other) transporter sync_0881 PF01894 Uncharacterised protein family UPF0047 sync_0893 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain sync_0893 PF07685 CobB/CobQ-like glutamine amidotransferase domain sync_0895 PF02545 Maf-like protein sync_0896 PF00421 Photosystem II protein sync_0897 PF00124 Photosynthetic reaction centre protein sync_0898 PF02392 Ycf4 sync_0899 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD sync_0900 PF10369 Small subunit of acetolactate synthase sync_0901 PF12697 Alpha/beta hydrolase family sync_0903 PF08041 PetM family of cytochrome b6f complex subunit 7 sync_0906 PF13847 Methyltransferase domain sync_0907 PF00849 RNA pseudouridylate synthase sync_0909 PF01176 Translation initiation factor 1A / IF-1 sync_0910 PF07992 Pyridine nucleotide-disulphide oxidoreductase sync_0915 PF05222 Alanine dehydrogenase/PNT, N-terminal domain sync_0915 PF01262 Alanine dehydrogenase/PNT, C-terminal domain sync_0916 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch sync_0916 PF01262 Alanine dehydrogenase/PNT, C-terminal domain sync_0916 PF05222 Alanine dehydrogenase/PNT, N-terminal domain sync_0917 PF02233 NAD(P) transhydrogenase beta subunit sync_0920 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase sync_0920 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain sync_0920 PF13288 DXP reductoisomerase C-terminal domain sync_0921 PF00209 Sodium:neurotransmitter symporter family sync_0924 PF01406 tRNA synthetases class I (C) catalytic domain sync_0924 PF09190 DALR domain sync_0927 PF07690 Major Facilitator Superfamily sync_0928 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain sync_0928 PF01367 5'-3' exonuclease, C-terminal SAM fold sync_0928 PF00476 DNA polymerase family A sync_0928 PF01612 3'-5' exonuclease sync_0929 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion sync_0930 PF06071 Protein of unknown function (DUF933) sync_0930 PF01926 50S ribosome-binding GTPase sync_0941 PF03447 Homoserine dehydrogenase, NAD binding domain sync_0941 PF00742 Homoserine dehydrogenase sync_0941 PF01842 ACT domain sync_0942 PF02657 Fe-S metabolism associated domain sync_0948 PF00484 Carbonic anhydrase sync_0956 PF02696 Uncharacterized ACR, YdiU/UPF0061 family sync_0961 PF02075 Crossover junction endodeoxyribonuclease RuvC sync_0962 PF01078 Magnesium chelatase, subunit ChlI sync_0962 PF17863 AAA lid domain sync_0965 PF00588 SpoU rRNA Methylase family sync_0966 PF13442 Cytochrome C oxidase, cbb3-type, subunit III sync_0967 PF02529 Cytochrome B6-F complex subunit 5 sync_0969 PF00117 Glutamine amidotransferase class-I sync_0970 PF00085 Thioredoxin sync_0971 PF00478 IMP dehydrogenase / GMP reductase domain sync_0973 PF03989 DNA gyrase C-terminal domain, beta-propeller sync_0973 PF00521 DNA gyrase/topoisomerase IV, subunit A sync_0975 PF03065 Glycosyl hydrolase family 57 sync_0975 PF09210 Domain of unknown function (DUF1957) sync_0976 PF00682 HMGL-like sync_0976 PF08502 LeuA allosteric (dimerisation) domain sync_0977 PF00528 Binding-protein-dependent transport system inner membrane component sync_0980 PF00111 2Fe-2S iron-sulfur cluster binding domain sync_0988 PF00849 RNA pseudouridylate synthase sync_0989 PF07698 7TM receptor with intracellular HD hydrolase sync_0989 PF07697 7TM-HD extracellular sync_0989 PF01966 HD domain sync_0990 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain sync_0990 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain sync_0991 PF00348 Polyprenyl synthetase sync_0998 PF00300 Histidine phosphatase superfamily (branch 1) sync_0999 PF00708 Acylphosphatase sync_1000 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain sync_1000 PF07685 CobB/CobQ-like glutamine amidotransferase domain sync_1001 PF01471 Putative peptidoglycan binding domain sync_1001 PF10128 Glucose-6-phosphate dehydrogenase subunit sync_1002 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain sync_1002 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain sync_1003 PF00175 Oxidoreductase NAD-binding domain sync_1003 PF01383 CpcD/allophycocyanin linker domain sync_1006 PF07689 KaiB domain sync_1006 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase sync_1009 PF11940 Domain of unknown function (DUF3458) Ig-like fold sync_1009 PF01433 Peptidase family M1 domain sync_1009 PF17432 Domain of unknown function (DUF3458_C) ARM repeats sync_1011 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase sync_1011 PF14572 Phosphoribosyl synthetase-associated domain sync_1015 PF02446 4-alpha-glucanotransferase sync_1017 PF01479 S4 domain sync_1017 PF00849 RNA pseudouridylate synthase sync_1018 PF00140 Sigma-70 factor, region 1.2 sync_1018 PF04542 Sigma-70 region 2 sync_1018 PF04545 Sigma-70, region 4 sync_1018 PF04539 Sigma-70 region 3 sync_1020 PF03109 ABC1 family sync_1022 PF01276 Orn/Lys/Arg decarboxylase, major domain sync_1022 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain sync_1025 PF00561 alpha/beta hydrolase fold sync_1026 PF00465 Iron-containing alcohol dehydrogenase sync_1027 PF10431 C-terminal, D2-small domain, of ClpB protein sync_1027 PF07724 AAA domain (Cdc48 subfamily) sync_1027 PF17871 AAA lid domain sync_1027 PF02861 Clp amino terminal domain, pathogenicity island component sync_1027 PF00004 ATPase family associated with various cellular activities (AAA) sync_1028 PF00583 Acetyltransferase (GNAT) family sync_1029 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain sync_1029 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain sync_1030 PF02457 DisA bacterial checkpoint controller nucleotide-binding sync_1031 PF01255 Putative undecaprenyl diphosphate synthase sync_1032 PF04055 Radical SAM superfamily sync_1032 PF06968 Biotin and Thiamin Synthesis associated domain sync_1037 PF04055 Radical SAM superfamily sync_1038 PF13662 Toprim domain sync_1038 PF02132 RecR protein sync_1044 PF03816 Cell envelope-related transcriptional attenuator domain sync_1045 PF00999 Sodium/hydrogen exchanger family sync_1045 PF00582 Universal stress protein family sync_1046 PF00664 ABC transporter transmembrane region sync_1046 PF00005 ABC transporter sync_1048 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) sync_1051 PF00270 DEAD/DEAH box helicase sync_1051 PF03880 DbpA RNA binding domain sync_1051 PF00271 Helicase conserved C-terminal domain sync_1052 PF00483 Nucleotidyl transferase sync_1052 PF01050 Mannose-6-phosphate isomerase sync_1053 PF13538 UvrD-like helicase C-terminal domain sync_1054 PF12705 PD-(D/E)XK nuclease superfamily sync_1054 PF00580 UvrD/REP helicase N-terminal domain sync_1054 PF13361 UvrD-like helicase C-terminal domain sync_1055 PF17946 RecC C-terminal domain sync_1056 PF00149 Calcineurin-like phosphoesterase sync_1059 PF01758 Sodium Bile acid symporter family sync_1079 PF00072 Response regulator receiver domain sync_1079 PF13188 PAS domain sync_1079 PF08448 PAS fold sync_1079 PF00512 His Kinase A (phospho-acceptor) domain sync_1079 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase sync_1092 PF01494 FAD binding domain sync_1096 PF00565 Staphylococcal nuclease homologue sync_1116 PF00072 Response regulator receiver domain sync_1116 PF00196 Bacterial regulatory proteins, luxR family sync_1124 PF13180 PDZ domain sync_1133 PF00512 His Kinase A (phospho-acceptor) domain sync_1133 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase sync_1133 PF00672 HAMP domain sync_1134 PF00486 Transcriptional regulatory protein, C terminal sync_1134 PF00072 Response regulator receiver domain sync_1136 PF00132 Bacterial transferase hexapeptide (six repeats) sync_1137 PF06298 Photosystem II protein Y (PsbY) sync_1138 PF01134 Glucose inhibited division protein A sync_1140 PF05199 GMC oxidoreductase sync_1145 PF00486 Transcriptional regulatory protein, C terminal sync_1145 PF00072 Response regulator receiver domain sync_1147 PF00462 Glutaredoxin sync_1148 PF01722 BolA-like protein sync_1151 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ sync_1152 PF10674 Protein of unknown function (DUF2488) sync_1161 PF02798 Glutathione S-transferase, N-terminal domain sync_1161 PF00043 Glutathione S-transferase, C-terminal domain sync_1162 PF00106 short chain dehydrogenase sync_1167 PF01475 Ferric uptake regulator family sync_1169 PF04472 Cell division protein SepF sync_1171 PF09506 Glucosylglycerol-phosphate phosphatase (Salt_tol_Pase) sync_1172 PF02798 Glutathione S-transferase, N-terminal domain sync_1172 PF00043 Glutathione S-transferase, C-terminal domain sync_1174 PF13175 AAA ATPase domain sync_1176 PF01636 Phosphotransferase enzyme family sync_1180 PF01053 Cys/Met metabolism PLP-dependent enzyme sync_1181 PF04204 Homoserine O-succinyltransferase sync_1186 PF00005 ABC transporter sync_1187 PF00528 Binding-protein-dependent transport system inner membrane component sync_1189 PF00528 Binding-protein-dependent transport system inner membrane component sync_1190 PF00497 Bacterial extracellular solute-binding proteins, family 3 sync_1191 PF01740 STAS domain sync_1191 PF00916 Sulfate permease family sync_1195 PF01903 CbiX sync_1203 PF11780 Protein of unknown function (DUF3318) sync_1204 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain sync_1204 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain sync_1204 PF02142 MGS-like domain sync_1206 PF01235 Sodium:alanine symporter family sync_1208 PF00005 ABC transporter sync_1208 PF00664 ABC transporter transmembrane region sync_1210 PF00121 Triosephosphate isomerase sync_1211 PF00809 Pterin binding enzyme sync_1214 PF00005 ABC transporter sync_1214 PF00664 ABC transporter transmembrane region sync_1214 PF03412 Peptidase C39 family sync_1215 PF00005 ABC transporter sync_1215 PF00664 ABC transporter transmembrane region sync_1216 PF00529 HlyD membrane-fusion protein of T1SS sync_1219 PF00486 Transcriptional regulatory protein, C terminal sync_1219 PF00072 Response regulator receiver domain sync_1220 PF11965 Domain of unknown function (DUF3479) sync_1220 PF02514 CobN/Magnesium Chelatase sync_1221 PF05173 Dihydrodipicolinate reductase, C-terminus sync_1221 PF01113 Dihydrodipicolinate reductase, N-terminus sync_1223 PF00762 Ferrochelatase sync_1224 PF01494 FAD binding domain sync_1226 PF00156 Phosphoribosyl transferase domain sync_1232 PF00486 Transcriptional regulatory protein, C terminal sync_1232 PF00072 Response regulator receiver domain sync_1234 PF03976 Polyphosphate kinase 2 (PPK2) sync_1238 PF00762 Ferrochelatase sync_1244 PF00106 short chain dehydrogenase sync_1249 PF00427 Phycobilisome Linker polypeptide sync_1253 PF12437 Glutamine synthetase type III N terminal sync_1253 PF18318 Glutamine synthetase C-terminal domain sync_1253 PF00120 Glutamine synthetase, catalytic domain sync_1260 PF08548 Peptidase M10 serralysin C terminal sync_1260 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) sync_1263 PF04545 Sigma-70, region 4 sync_1263 PF00140 Sigma-70 factor, region 1.2 sync_1263 PF04542 Sigma-70 region 2 sync_1263 PF04539 Sigma-70 region 3 sync_1265 PF17975 Ribonucleotide reductase alpha domain sync_1265 PF02867 Ribonucleotide reductase, barrel domain sync_1269 PF16658 Class II release factor RF3, C-terminal domain sync_1269 PF00009 Elongation factor Tu GTP binding domain sync_1272 PF01430 Hsp33 protein sync_1273 PF00005 ABC transporter sync_1275 PF00318 Ribosomal protein S2 sync_1276 PF00889 Elongation factor TS sync_1278 PF17191 RecG wedge domain sync_1278 PF00271 Helicase conserved C-terminal domain sync_1278 PF00270 DEAD/DEAH box helicase sync_1279 PF01427 D-ala-D-ala dipeptidase sync_1280 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain sync_1280 PF01077 Nitrite and sulphite reductase 4Fe-4S domain sync_1281 PF02092 Glycyl-tRNA synthetase beta subunit sync_1282 PF01494 FAD binding domain sync_1284 PF01136 Peptidase family U32 sync_1284 PF12392 Collagenase sync_1288 PF00005 ABC transporter sync_1290 PF01578 Cytochrome C assembly protein sync_1293 PF00012 Hsp70 protein sync_1295 PF03741 Integral membrane protein TerC family sync_1300 PF00271 Helicase conserved C-terminal domain sync_1300 PF00270 DEAD/DEAH box helicase sync_1301 PF00551 Formyl transferase sync_1301 PF02911 Formyl transferase, C-terminal domain sync_1303 PF01523 Putative modulator of DNA gyrase sync_1304 PF02915 Rubrerythrin sync_1308 PF02441 Flavoprotein sync_1309 PF00575 S1 RNA binding domain sync_1309 PF00773 RNB domain sync_1309 PF08206 Ribonuclease B OB domain sync_1309 PF17876 Cold shock domain sync_1311 PF01169 Uncharacterized protein family UPF0016 sync_1313 PF05969 Photosystem II complex subunit Ycf12 sync_1315 PF17768 RecJ OB domain sync_1315 PF01368 DHH family sync_1315 PF02272 DHHA1 domain sync_1315 PF10141 Single-strand DNA-specific exonuclease, C terminal domain sync_1316 PF13419 Haloacid dehalogenase-like hydrolase sync_1319 PF01783 Ribosomal L32p protein family sync_1320 PF01434 Peptidase family M41 sync_1320 PF06480 FtsH Extracellular sync_1320 PF17862 AAA+ lid domain sync_1320 PF00004 ATPase family associated with various cellular activities (AAA) sync_1321 PF03699 Uncharacterised protein family (UPF0182) sync_1322 PF10417 C-terminal domain of 1-Cys peroxiredoxin sync_1322 PF00578 AhpC/TSA family sync_1325 PF01551 Peptidase family M23 sync_1325 PF08525 Opacity-associated protein A N-terminal motif sync_1325 PF01476 LysM domain sync_1326 PF00588 SpoU rRNA Methylase family sync_1328 PF03040 CemA family sync_1333 PF00133 tRNA synthetases class I (I, L, M and V) sync_1333 PF09334 tRNA synthetases class I (M) sync_1333 PF08264 Anticodon-binding domain of tRNA sync_1335 PF08669 Glycine cleavage T-protein C-terminal barrel domain sync_1335 PF07992 Pyridine nucleotide-disulphide oxidoreductase sync_1335 PF17806 Sarcosine oxidase A3 domain sync_1335 PF01571 Aminomethyltransferase folate-binding domain sync_1336 PF00773 RNB domain sync_1337 PF01084 Ribosomal protein S18 sync_1338 PF00471 Ribosomal protein L33 sync_1339 PF03147 Ferredoxin-fold anticodon binding domain sync_1339 PF01588 Putative tRNA binding domain sync_1339 PF03483 B3/4 domain sync_1339 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain sync_1339 PF03484 tRNA synthetase B5 domain sync_1340 PF13847 Methyltransferase domain sync_1341 PF00502 Phycobilisome protein sync_1345 PF04542 Sigma-70 region 2 sync_1345 PF04539 Sigma-70 region 3 sync_1345 PF04545 Sigma-70, region 4 sync_1347 PF08486 Stage II sporulation protein sync_1353 PF02965 Vitamin B12 dependent methionine synthase, activation domain sync_1353 PF02574 Homocysteine S-methyltransferase sync_1353 PF02310 B12 binding domain sync_1353 PF00809 Pterin binding enzyme sync_1353 PF02607 B12 binding domain sync_1354 PF01063 Amino-transferase class IV sync_1355 PF02514 CobN/Magnesium Chelatase sync_1357 PF02811 PHP domain sync_1359 PF04244 Deoxyribodipyrimidine photo-lyase-related protein sync_1361 PF02151 UvrB/uvrC motif sync_1361 PF08459 UvrC Helix-hairpin-helix N-terminal sync_1361 PF01541 GIY-YIG catalytic domain sync_1362 PF01467 Cytidylyltransferase-like sync_1364 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family sync_1367 PF00266 Aminotransferase class-V sync_1368 PF01678 Diaminopimelate epimerase sync_1375 PF00133 tRNA synthetases class I (I, L, M and V) sync_1375 PF13603 Leucyl-tRNA synthetase, Domain 2 sync_1375 PF08264 Anticodon-binding domain of tRNA sync_1376 PF00342 Phosphoglucose isomerase sync_1381 PF00551 Formyl transferase sync_1382 PF02774 Semialdehyde dehydrogenase, dimerisation domain sync_1382 PF01118 Semialdehyde dehydrogenase, NAD binding domain sync_1383 PF00925 GTP cyclohydrolase II sync_1383 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase sync_1384 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD sync_1385 PF01048 Phosphorylase superfamily sync_1386 PF13580 SIS domain sync_1388 PF00226 DnaJ domain sync_1388 PF01556 DnaJ C terminal domain sync_1389 PF00012 Hsp70 protein sync_1390 PF00528 Binding-protein-dependent transport system inner membrane component sync_1391 PF00528 Binding-protein-dependent transport system inner membrane component sync_1392 PF00005 ABC transporter sync_1394 PF00111 2Fe-2S iron-sulfur cluster binding domain sync_1395 PF00459 Inositol monophosphatase family sync_1396 PF13393 Histidyl-tRNA synthetase sync_1398 PF00183 Hsp90 protein sync_1398 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase sync_1399 PF00830 Ribosomal L28 family sync_1400 PF00578 AhpC/TSA family sync_1401 PF00982 Glycosyltransferase family 20 sync_1402 PF01547 Bacterial extracellular solute-binding protein sync_1403 PF00528 Binding-protein-dependent transport system inner membrane component sync_1404 PF00528 Binding-protein-dependent transport system inner membrane component sync_1405 PF08402 TOBE domain sync_1405 PF00005 ABC transporter sync_1407 PF10693 Protein of unknown function (DUF2499) sync_1409 PF01241 Photosystem I psaG / psaK sync_1410 PF13292 1-deoxy-D-xylulose-5-phosphate synthase sync_1410 PF02779 Transketolase, pyrimidine binding domain sync_1410 PF02780 Transketolase, C-terminal domain sync_1411 PF00585 C-terminal regulatory domain of Threonine dehydratase sync_1411 PF00291 Pyridoxal-phosphate dependent enzyme sync_1413 PF02325 YGGT family sync_1415 PF02887 Pyruvate kinase, alpha/beta domain sync_1415 PF00391 PEP-utilising enzyme, mobile domain sync_1415 PF00224 Pyruvate kinase, barrel domain sync_1416 PF00005 ABC transporter sync_1416 PF02687 FtsX-like permease family sync_1416 PF12704 MacB-like periplasmic core domain sync_1417 PF06480 FtsH Extracellular sync_1417 PF00004 ATPase family associated with various cellular activities (AAA) sync_1417 PF17862 AAA+ lid domain sync_1417 PF01434 Peptidase family M41 sync_1418 PF00574 Clp protease sync_1419 PF11264 Thylakoid formation protein sync_1422 PF03742 PetN sync_1423 PF02617 ATP-dependent Clp protease adaptor protein ClpS sync_1424 PF03209 PUCC protein sync_1428 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain sync_1428 PF02222 ATP-grasp domain sync_1430 PF01761 3-dehydroquinate synthase sync_1436 PF02445 Quinolinate synthetase A protein sync_1437 PF01068 ATP dependent DNA ligase domain sync_1437 PF04679 ATP dependent DNA ligase C terminal region sync_1437 PF04675 DNA ligase N terminus sync_1438 PF04675 DNA ligase N terminus sync_1438 PF04679 ATP dependent DNA ligase C terminal region sync_1438 PF01068 ATP dependent DNA ligase domain sync_1439 PF08494 DEAD/H associated sync_1439 PF00270 DEAD/DEAH box helicase sync_1439 PF00271 Helicase conserved C-terminal domain sync_1452 PF00684 DnaJ central domain sync_1452 PF01556 DnaJ C terminal domain sync_1452 PF00226 DnaJ domain sync_1456 PF01370 NAD dependent epimerase/dehydratase family sync_1457 PF00067 Cytochrome P450 sync_1459 PF07992 Pyridine nucleotide-disulphide oxidoreductase sync_1460 PF02797 Chalcone and stilbene synthases, C-terminal domain sync_1460 PF00195 Chalcone and stilbene synthases, N-terminal domain sync_1462 PF00756 Putative esterase sync_1463 PF08240 Alcohol dehydrogenase GroES-like domain sync_1463 PF00107 Zinc-binding dehydrogenase sync_1465 PF03170 Bacterial cellulose synthase subunit sync_1465 PF07238 PilZ domain sync_1465 PF00535 Glycosyl transferase family 2 sync_1467 PF00150 Cellulase (glycosyl hydrolase family 5) sync_1467 PF12891 Glycoside hydrolase family 44 sync_1467 PF00942 Cellulose binding domain sync_1471 PF13193 AMP-binding enzyme C-terminal domain sync_1471 PF00501 AMP-binding enzyme sync_1472 PF02954 Bacterial regulatory protein, Fis family sync_1472 PF13426 PAS domain sync_1472 PF00158 Sigma-54 interaction domain sync_1483 PF00005 ABC transporter sync_1489 PF07731 Multicopper oxidase sync_1489 PF07732 Multicopper oxidase sync_1489 PF00394 Multicopper oxidase sync_1491 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain sync_1491 PF00205 Thiamine pyrophosphate enzyme, central domain sync_1491 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain sync_1496 PF11412 Disulphide bond corrector protein DsbC sync_1496 PF02683 Cytochrome C biogenesis protein transmembrane region sync_1497 PF00950 ABC 3 transport family sync_1498 PF00005 ABC transporter sync_1499 PF01297 Zinc-uptake complex component A periplasmic sync_1500 PF04966 Carbohydrate-selective porin, OprB family sync_1500 PF00395 S-layer homology domain sync_1501 PF04966 Carbohydrate-selective porin, OprB family sync_1501 PF00395 S-layer homology domain sync_1508 PF07683 Cobalamin synthesis protein cobW C-terminal domain sync_1508 PF02492 CobW/HypB/UreG, nucleotide-binding domain sync_1510 PF00873 AcrB/AcrD/AcrF family sync_1512 PF03707 Bacterial signalling protein N terminal repeat sync_1512 PF00563 EAL domain sync_1512 PF00990 Diguanylate cyclase, GGDEF domain sync_1514 PF00990 Diguanylate cyclase, GGDEF domain sync_1515 PF13193 AMP-binding enzyme C-terminal domain sync_1515 PF00501 AMP-binding enzyme sync_1522 PF00384 Molybdopterin oxidoreductase sync_1525 PF10502 Signal peptidase, peptidase S26 sync_1526 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain sync_1526 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain sync_1526 PF16582 Middle domain of thiamine pyrophosphate sync_1527 PF00378 Enoyl-CoA hydratase/isomerase sync_1528 PF01476 LysM domain sync_1528 PF03734 L,D-transpeptidase catalytic domain sync_1529 PF08323 Starch synthase catalytic domain sync_1529 PF00534 Glycosyl transferases group 1 sync_1531 PF02875 Mur ligase family, glutamate ligase domain sync_1531 PF08245 Mur ligase middle domain sync_1531 PF01225 Mur ligase family, catalytic domain sync_1533 PF12804 MobA-like NTP transferase domain sync_1533 PF00132 Bacterial transferase hexapeptide (six repeats) sync_1537 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) sync_1540 PF13545 Crp-like helix-turn-helix domain sync_1540 PF00027 Cyclic nucleotide-binding domain sync_1542 PF04966 Carbohydrate-selective porin, OprB family sync_1542 PF00395 S-layer homology domain sync_1544 PF13640 2OG-Fe(II) oxygenase superfamily sync_1546 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase sync_1547 PF04029 2-phosphosulpholactate phosphatase sync_1548 PF00795 Carbon-nitrogen hydrolase sync_1549 PF11741 AMIN domain sync_1549 PF01520 N-acetylmuramoyl-L-alanine amidase sync_1550 PF01177 Asp/Glu/Hydantoin racemase sync_1551 PF00348 Polyprenyl synthetase sync_1552 PF13419 Haloacid dehalogenase-like hydrolase sync_1553 PF00501 AMP-binding enzyme sync_1553 PF16177 Acetyl-coenzyme A synthetase N-terminus sync_1553 PF13193 AMP-binding enzyme C-terminal domain sync_1556 PF00578 AhpC/TSA family sync_1557 PF00929 Exonuclease sync_1557 PF02811 PHP domain sync_1557 PF14579 Helix-hairpin-helix motif sync_1557 PF17657 Bacterial DNA polymerase III alpha subunit finger domain sync_1557 PF07733 Bacterial DNA polymerase III alpha NTPase domain sync_1561 PF01252 Signal peptidase (SPase) II sync_1562 PF14814 Bifunctional transglycosylase second domain sync_1562 PF00905 Penicillin binding protein transpeptidase domain sync_1562 PF00912 Transglycosylase sync_1564 PF00282 Pyridoxal-dependent decarboxylase conserved domain sync_1565 PF14437 MafB19-like deaminase sync_1566 PF00266 Aminotransferase class-V sync_1567 PF00502 Phycobilisome protein sync_1569 PF00120 Glutamine synthetase, catalytic domain sync_1569 PF03951 Glutamine synthetase, beta-Grasp domain sync_1576 PF01209 ubiE/COQ5 methyltransferase family sync_1581 PF16416 ARM-like repeat domain, GUN4-N terminal sync_1581 PF05419 GUN4-like sync_1583 PF03912 Psb28 protein sync_1584 PF01594 AI-2E family transporter sync_1586 PF00258 Flavodoxin sync_1586 PF01613 Flavin reductase like domain sync_1588 PF02355 Protein export membrane protein sync_1589 PF02355 Protein export membrane protein sync_1589 PF07549 SecD/SecF GG Motif sync_1590 PF02780 Transketolase, C-terminal domain sync_1590 PF02779 Transketolase, pyrimidine binding domain sync_1590 PF00364 Biotin-requiring enzyme sync_1593 PF08544 GHMP kinases C terminal sync_1593 PF00288 GHMP kinases N terminal domain sync_1594 PF00398 Ribosomal RNA adenine dimethylase sync_1595 PF00485 Phosphoribulokinase / Uridine kinase family sync_1596 PF02021 Uncharacterised protein family UPF0102 sync_1600 PF02590 Predicted SPOUT methyltransferase sync_1606 PF00717 Peptidase S24-like sync_1607 PF11799 impB/mucB/samB family C-terminal domain sync_1607 PF00817 impB/mucB/samB family sync_1607 PF13438 Domain of unknown function (DUF4113) sync_1608 PF01494 FAD binding domain sync_1613 PF10410 DnaB-helicase binding domain of primase sync_1613 PF08275 DNA primase catalytic core, N-terminal domain sync_1613 PF01807 CHC2 zinc finger sync_1614 PF00892 EamA-like transporter family sync_1627 PF07499 RuvA, C-terminal domain sync_1627 PF01330 RuvA N terminal domain sync_1628 PF00312 Ribosomal protein S15 sync_1630 PF01336 OB-fold nucleic acid binding domain sync_1630 PF02811 PHP domain sync_1630 PF14579 Helix-hairpin-helix motif sync_1630 PF17657 Bacterial DNA polymerase III alpha subunit finger domain sync_1630 PF07733 Bacterial DNA polymerase III alpha NTPase domain sync_1631 PF01425 Amidase sync_1633 PF00588 SpoU rRNA Methylase family sync_1633 PF08032 RNA 2'-O ribose methyltransferase substrate binding sync_1634 PF00636 Ribonuclease III domain sync_1635 PF01740 STAS domain sync_1636 PF00117 Glutamine amidotransferase class-I sync_1636 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain sync_1637 PF00591 Glycosyl transferase family, a/b domain sync_1637 PF02885 Glycosyl transferase family, helical bundle domain sync_1638 PF00005 ABC transporter sync_1638 PF00664 ABC transporter transmembrane region sync_1640 PF01625 Peptide methionine sulfoxide reductase sync_1651 PF05193 Peptidase M16 inactive domain sync_1651 PF00675 Insulinase (Peptidase family M16) sync_1656 PF05996 Ferredoxin-dependent bilin reductase sync_1659 PF00005 ABC transporter sync_1661 PF00535 Glycosyl transferase family 2 sync_1664 PF01940 Integral membrane protein DUF92 sync_1665 PF00140 Sigma-70 factor, region 1.2 sync_1665 PF04545 Sigma-70, region 4 sync_1665 PF04539 Sigma-70 region 3 sync_1665 PF04542 Sigma-70 region 2 sync_1668 PF00528 Binding-protein-dependent transport system inner membrane component sync_1669 PF03466 LysR substrate binding domain sync_1669 PF00005 ABC transporter sync_1671 PF00155 Aminotransferase class I and II sync_1673 PF03167 Uracil DNA glycosylase superfamily sync_1674 PF04551 GcpE protein sync_1675 PF03572 Peptidase family S41 sync_1675 PF00595 PDZ domain sync_1679 PF03461 TRCF domain sync_1679 PF02559 CarD-like/TRCF domain sync_1679 PF00270 DEAD/DEAH box helicase sync_1679 PF00271 Helicase conserved C-terminal domain sync_1679 PF17757 UvrB interaction domain sync_1683 PF00834 Ribulose-phosphate 3 epimerase family sync_1684 PF00834 Ribulose-phosphate 3 epimerase family sync_1685 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded sync_1686 PF01488 Shikimate / quinate 5-dehydrogenase sync_1686 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain sync_1686 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain sync_1687 PF00483 Nucleotidyl transferase sync_1688 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain sync_1688 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase sync_1689 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase sync_1692 PF00920 Dehydratase family sync_1696 PF07683 Cobalamin synthesis protein cobW C-terminal domain sync_1696 PF02492 CobW/HypB/UreG, nucleotide-binding domain sync_1700 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase sync_1702 PF02016 LD-carboxypeptidase N-terminal domain sync_1702 PF17676 LD-carboxypeptidase C-terminal domain sync_1703 PF01116 Fructose-bisphosphate aldolase class-II sync_1704 PF00274 Fructose-bisphosphate aldolase class-I sync_1705 PF01408 Oxidoreductase family, NAD-binding Rossmann fold sync_1705 PF02894 Oxidoreductase family, C-terminal alpha/beta domain sync_1707 PF17848 Acetyl-coA carboxylase zinc finger domain sync_1707 PF01039 Carboxyl transferase domain sync_1709 PF06750 Bacterial Peptidase A24 N-terminal domain sync_1709 PF01478 Type IV leader peptidase family sync_1711 PF00485 Phosphoribulokinase / Uridine kinase family sync_1712 PF00180 Isocitrate/isopropylmalate dehydrogenase sync_1713 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD sync_1713 PF00132 Bacterial transferase hexapeptide (six repeats) sync_1714 PF01472 PUA domain sync_1714 PF00696 Amino acid kinase family sync_1717 PF03652 Holliday junction resolvase sync_1721 PF00072 Response regulator receiver domain sync_1721 PF12452 Protein of unknown function (DUF3685) sync_1723 PF00977 Histidine biosynthesis protein sync_1725 PF01066 CDP-alcohol phosphatidyltransferase sync_1726 PF00571 CBS domain sync_1728 PF01476 LysM domain sync_1728 PF03734 L,D-transpeptidase catalytic domain sync_1734 PF02254 TrkA-N domain sync_1734 PF07885 Ion channel sync_1747 PF01297 Zinc-uptake complex component A periplasmic sync_1748 PF00950 ABC 3 transport family sync_1749 PF00005 ABC transporter sync_1752 PF03773 Predicted permease sync_1756 PF00950 ABC 3 transport family sync_1757 PF00005 ABC transporter sync_1758 PF01297 Zinc-uptake complex component A periplasmic sync_1770 PF00535 Glycosyl transferase family 2 sync_1770 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 sync_1771 PF00080 Copper/zinc superoxide dismutase (SODC) sync_1801 PF00106 short chain dehydrogenase sync_1804 PF00487 Fatty acid desaturase sync_1807 PF01925 Sulfite exporter TauE/SafE sync_1818 PF00762 Ferrochelatase sync_1834 PF01062 Bestrophin, RFP-TM, chloride channel sync_1835 PF00171 Aldehyde dehydrogenase family sync_1844 PF01593 Flavin containing amine oxidoreductase sync_1846 PF01694 Rhomboid family sync_1850 PF10576 Iron-sulfur binding domain of endonuclease III sync_1850 PF00633 Helix-hairpin-helix motif sync_1850 PF00730 HhH-GPD superfamily base excision DNA repair protein sync_1856 PF00124 Photosynthetic reaction centre protein sync_1858 PF00124 Photosynthetic reaction centre protein sync_1863 PF00579 tRNA synthetases class I (W and Y) sync_1866 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) sync_1866 PF03129 Anticodon binding domain sync_1866 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain sync_1869 PF00288 GHMP kinases N terminal domain sync_1869 PF08544 GHMP kinases C terminal sync_1870 PF00361 Proton-conducting membrane transporter sync_1871 PF01432 Peptidase family M3 sync_1877 PF02152 Dihydroneopterin aldolase sync_1878 PF00171 Aldehyde dehydrogenase family sync_1879 PF00480 ROK family sync_1881 PF10726 Protein of function (DUF2518) sync_1884 PF02129 X-Pro dipeptidyl-peptidase (S15 family) sync_1884 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain sync_1886 PF00128 Alpha amylase, catalytic domain sync_1886 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) sync_1886 PF02806 Alpha amylase, C-terminal all-beta domain sync_1887 PF01208 Uroporphyrinogen decarboxylase (URO-D) sync_1889 PF00127 Copper binding proteins, plastocyanin/azurin family sync_1897 PF00004 ATPase family associated with various cellular activities (AAA) sync_1897 PF17871 AAA lid domain sync_1897 PF10431 C-terminal, D2-small domain, of ClpB protein sync_1897 PF07724 AAA domain (Cdc48 subfamily) sync_1897 PF02861 Clp amino terminal domain, pathogenicity island component sync_1899 PF01502 Phosphoribosyl-AMP cyclohydrolase sync_1899 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase sync_1902 PF04545 Sigma-70, region 4 sync_1902 PF00140 Sigma-70 factor, region 1.2 sync_1902 PF04542 Sigma-70 region 2 sync_1902 PF04539 Sigma-70 region 3 sync_1910 PF00290 Tryptophan synthase alpha chain sync_1912 PF10716 NADH dehydrogenase transmembrane subunit sync_1915 PF00732 GMC oxidoreductase sync_1915 PF05199 GMC oxidoreductase sync_1922 PF01979 Amidohydrolase family sync_1923 PF00916 Sulfate permease family sync_1923 PF01740 STAS domain sync_1924 PF01699 Sodium/calcium exchanger protein sync_1927 PF00116 Cytochrome C oxidase subunit II, periplasmic domain sync_1927 PF02790 Cytochrome C oxidase subunit II, transmembrane domain sync_1928 PF00115 Cytochrome C and Quinol oxidase polypeptide I sync_1929 PF00510 Cytochrome c oxidase subunit III sync_1930 PF00732 GMC oxidoreductase sync_1930 PF05199 GMC oxidoreductase sync_1931 PF07992 Pyridine nucleotide-disulphide oxidoreductase sync_1931 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain sync_1933 PF00308 Bacterial dnaA protein sync_1933 PF11638 DnaA N-terminal domain sync_1933 PF08299 Bacterial dnaA protein helix-turn-helix sync_1934 PF13180 PDZ domain sync_1936 PF00535 Glycosyl transferase family 2 sync_1937 PF00583 Acetyltransferase (GNAT) family sync_1939 PF00005 ABC transporter sync_1939 PF00664 ABC transporter transmembrane region sync_1940 PF01634 ATP phosphoribosyltransferase sync_1941 PF16123 Hydroxyacylglutathione hydrolase C-terminus sync_1941 PF00753 Metallo-beta-lactamase superfamily sync_1942 PF17845 FbpC C-terminal regulatory nucleotide binding domain sync_1942 PF00005 ABC transporter sync_1943 PF01042 Endoribonuclease L-PSP sync_1945 PF17866 AAA lid domain sync_1945 PF00004 ATPase family associated with various cellular activities (AAA) sync_1950 PF00258 Flavodoxin sync_1951 PF07992 Pyridine nucleotide-disulphide oxidoreductase sync_1953 PF00111 2Fe-2S iron-sulfur cluster binding domain sync_1958 PF00361 Proton-conducting membrane transporter sync_1959 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus sync_1959 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus sync_1959 PF00361 Proton-conducting membrane transporter sync_1966 PF00101 Ribulose bisphosphate carboxylase, small chain sync_1967 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain sync_1967 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain sync_1969 PF01725 Ham1 family sync_1973 PF00148 Nitrogenase component 1 type Oxidoreductase sync_1974 PF00148 Nitrogenase component 1 type Oxidoreductase sync_1974 PF08369 Proto-chlorophyllide reductase 57 kD subunit sync_1975 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family sync_1976 PF00106 short chain dehydrogenase sync_1978 PF07465 Photosystem I protein M (PsaM) sync_1981 PF01925 Sulfite exporter TauE/SafE sync_1982 PF03099 Biotin/lipoate A/B protein ligase family sync_1983 PF00571 CBS domain sync_1983 PF02163 Peptidase family M50 sync_1984 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase sync_1986 PF01227 GTP cyclohydrolase I sync_1988 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit sync_1990 PF11266 Long-chain fatty aldehyde decarbonylase sync_1993 PF00575 S1 RNA binding domain sync_1999 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain sync_1999 PF00205 Thiamine pyrophosphate enzyme, central domain sync_1999 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain sync_2000 PF00762 Ferrochelatase sync_2001 PF00589 Phage integrase family sync_2002 PF08241 Methyltransferase domain sync_2003 PF12557 Cob(I)alamin adenosyltransferase N terminal sync_2003 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP sync_2004 PF00696 Amino acid kinase family sync_2005 PF01765 Ribosome recycling factor sync_2006 PF01494 FAD binding domain sync_2007 PF00875 DNA photolyase sync_2007 PF03441 FAD binding domain of DNA photolyase sync_2008 PF13202 EF hand sync_2008 PF00923 Transaldolase/Fructose-6-phosphate aldolase sync_2009 PF00905 Penicillin binding protein transpeptidase domain sync_2009 PF03717 Penicillin-binding Protein dimerisation domain sync_2009 PF03793 PASTA domain sync_2012 PF00300 Histidine phosphatase superfamily (branch 1) sync_2013 PF01979 Amidohydrolase family sync_2014 PF10502 Signal peptidase, peptidase S26 sync_2016 PF03960 ArsC family sync_2018 PF00719 Inorganic pyrophosphatase sync_2021 PF04073 Aminoacyl-tRNA editing domain sync_2021 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) sync_2021 PF03129 Anticodon binding domain sync_2022 PF13326 Photosystem II Pbs27 sync_2023 PF00709 Adenylosuccinate synthetase sync_2024 PF00294 pfkB family carbohydrate kinase sync_2025 PF02571 Precorrin-6x reductase CbiJ/CobK sync_2026 PF00436 Single-strand binding protein family sync_2028 PF11016 Protein of unknown function (DUF2854) sync_2029 PF00696 Amino acid kinase family sync_2031 PF00270 DEAD/DEAH box helicase sync_2031 PF18319 PriA DNA helicase Cys-rich region (CRR) domain sync_2031 PF00271 Helicase conserved C-terminal domain sync_2031 PF17764 3′ DNA-binding domain (3′BD) sync_2031 PF18074 Primosomal protein N C-terminal domain sync_2032 PF00140 Sigma-70 factor, region 1.2 sync_2032 PF04542 Sigma-70 region 2 sync_2032 PF04545 Sigma-70, region 4 sync_2032 PF04539 Sigma-70 region 3 sync_2036 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain sync_2036 PF03900 Porphobilinogen deaminase, C-terminal domain sync_2039 PF00719 Inorganic pyrophosphatase sync_2040 PF02074 Carboxypeptidase Taq (M32) metallopeptidase sync_2044 PF01329 Pterin 4 alpha carbinolamine dehydratase sync_2045 PF07683 Cobalamin synthesis protein cobW C-terminal domain sync_2045 PF02492 CobW/HypB/UreG, nucleotide-binding domain sync_2051 PF01969 Protein of unknown function DUF111 sync_2056 PF03372 Endonuclease/Exonuclease/phosphatase family sync_2057 PF02913 FAD linked oxidases, C-terminal domain sync_2057 PF01565 FAD binding domain sync_2058 PF00202 Aminotransferase class-III sync_2061 PF04461 Protein of unknown function (DUF520) sync_2075 PF00762 Ferrochelatase sync_2080 PF00171 Aldehyde dehydrogenase family sync_2086 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases sync_2087 PF00459 Inositol monophosphatase family sync_2088 PF00575 S1 RNA binding domain sync_2088 PF03725 3' exoribonuclease family, domain 2 sync_2088 PF01138 3' exoribonuclease family, domain 1 sync_2088 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain sync_2088 PF00013 KH domain sync_2089 PF00253 Ribosomal protein S14p/S29e sync_2090 PF02163 Peptidase family M50 sync_2090 PF13180 PDZ domain sync_2091 PF02403 Seryl-tRNA synthetase N-terminal domain sync_2091 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) sync_2093 PF00004 ATPase family associated with various cellular activities (AAA) sync_2093 PF17862 AAA+ lid domain sync_2093 PF06480 FtsH Extracellular sync_2093 PF01434 Peptidase family M41 sync_2095 PF02096 60Kd inner membrane protein sync_2097 PF00825 Ribonuclease P sync_2098 PF00468 Ribosomal protein L34 sync_2100 PF07736 Chorismate mutase type I sync_2101 PF01343 Peptidase family S49 sync_2102 PF00892 EamA-like transporter family sync_2103 PF00534 Glycosyl transferases group 1 sync_2103 PF13439 Glycosyltransferase Family 4 sync_2106 PF04012 PspA/IM30 family sync_2107 PF00085 Thioredoxin sync_2108 PF00155 Aminotransferase class I and II sync_2109 PF02237 Biotin protein ligase C terminal domain sync_2109 PF03099 Biotin/lipoate A/B protein ligase family sync_2109 PF08279 HTH domain sync_2110 PF01551 Peptidase family M23 sync_2110 PF04225 Opacity-associated protein A LysM-like domain sync_2111 PF00072 Response regulator receiver domain sync_2111 PF00486 Transcriptional regulatory protein, C terminal sync_2112 PF12704 MacB-like periplasmic core domain sync_2112 PF00005 ABC transporter sync_2112 PF02687 FtsX-like permease family sync_2113 PF00361 Proton-conducting membrane transporter sync_2114 PF13368 Topoisomerase C-terminal repeat sync_2114 PF01751 Toprim domain sync_2114 PF01131 DNA topoisomerase sync_2122 PF00677 Lumazine binding domain sync_2125 PF00510 Cytochrome c oxidase subunit III sync_2126 PF00115 Cytochrome C and Quinol oxidase polypeptide I sync_2127 PF02790 Cytochrome C oxidase subunit II, transmembrane domain sync_2127 PF00116 Cytochrome C oxidase subunit II, periplasmic domain sync_2128 PF02628 Cytochrome oxidase assembly protein sync_2129 PF01040 UbiA prenyltransferase family sync_2130 PF13732 Domain of unknown function (DUF4162) sync_2130 PF00005 ABC transporter sync_2133 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase sync_2135 PF00118 TCP-1/cpn60 chaperonin family sync_2138 PF02254 TrkA-N domain sync_2138 PF07885 Ion channel sync_2140 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase sync_2141 PF02016 LD-carboxypeptidase N-terminal domain sync_2141 PF17676 LD-carboxypeptidase C-terminal domain sync_2142 PF01040 UbiA prenyltransferase family sync_2143 PF02541 Ppx/GppA phosphatase family sync_2146 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases sync_2147 PF01790 Prolipoprotein diacylglyceryl transferase sync_2148 PF01333 Apocytochrome F, C-terminal sync_2148 PF16639 Apocytochrome F, N-terminal sync_2149 PF00355 Rieske [2Fe-2S] domain sync_2151 PF00902 Sec-independent protein translocase protein (TatC) sync_2153 PF00625 Guanylate kinase sync_2154 PF01701 Photosystem I reaction centre subunit IX / PsaJ sync_2155 PF02507 Photosystem I reaction centre subunit III sync_2156 PF00814 Glycoprotease family sync_2157 PF00762 Ferrochelatase sync_2158 PF00437 Type II/IV secretion system protein sync_2159 PF02350 UDP-N-acetylglucosamine 2-epimerase sync_2163 PF00749 tRNA synthetases class I (E and Q), catalytic domain sync_2168 PF01245 Ribosomal protein L19 sync_2170 PF00557 Metallopeptidase family M24 sync_2171 PF00106 short chain dehydrogenase sync_2172 PF07085 DRTGG domain sync_2190 PF00749 tRNA synthetases class I (E and Q), catalytic domain sync_2191 PF00216 Bacterial DNA-binding protein sync_2193 PF00128 Alpha amylase, catalytic domain sync_2193 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) sync_2196 PF02405 Permease MlaE sync_2199 PF02660 Glycerol-3-phosphate acyltransferase sync_2200 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family sync_2201 PF08450 SMP-30/Gluconolactonase/LRE-like region sync_2203 PF00579 tRNA synthetases class I (W and Y) sync_2205 PF00072 Response regulator receiver domain sync_2205 PF00196 Bacterial regulatory proteins, luxR family sync_2208 PF00883 Cytosol aminopeptidase family, catalytic domain sync_2208 PF02789 Cytosol aminopeptidase family, N-terminal domain sync_2210 PF01625 Peptide methionine sulfoxide reductase sync_2211 PF02684 Lipid-A-disaccharide synthetase sync_2212 PF00132 Bacterial transferase hexapeptide (six repeats) sync_2212 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 sync_2213 PF07977 FabA-like domain sync_2214 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase sync_2216 PF01259 SAICAR synthetase sync_2218 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain sync_2218 PF02844 Phosphoribosylglycinamide synthetase, N domain sync_2218 PF02843 Phosphoribosylglycinamide synthetase, C domain sync_2219 PF00989 PAS fold sync_2219 PF00512 His Kinase A (phospho-acceptor) domain sync_2219 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase sync_2219 PF00672 HAMP domain sync_2220 PF06745 KaiC sync_2221 PF07689 KaiB domain sync_2222 PF07688 KaiA C-terminal domain sync_2223 PF00829 Ribosomal prokaryotic L21 protein sync_2224 PF01016 Ribosomal L27 protein sync_2229 PF12833 Helix-turn-helix domain sync_2229 PF14525 AraC-binding-like domain sync_2233 PF16198 tRNA pseudouridylate synthase B C-terminal domain sync_2233 PF01509 TruB family pseudouridylate synthase (N terminal domain) sync_2234 PF01709 Transcriptional regulator sync_2245 PF05378 Hydantoinase/oxoprolinase N-terminal region sync_2245 PF01968 Hydantoinase/oxoprolinase sync_2246 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase sync_2248 PF04122 Putative cell wall binding repeat 2 sync_2248 PF08486 Stage II sporulation protein sync_2249 PF12706 Beta-lactamase superfamily domain sync_2250 PF14495 Cytochrome c-550 domain sync_2251 PF00427 Phycobilisome Linker polypeptide sync_2254 PF00111 2Fe-2S iron-sulfur cluster binding domain sync_2256 PF01842 ACT domain sync_2256 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain sync_2256 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain sync_2260 PF02875 Mur ligase family, glutamate ligase domain sync_2260 PF08245 Mur ligase middle domain sync_2269 PF01192 RNA polymerase Rpb6 sync_2271 PF00012 Hsp70 protein sync_2274 PF02941 Ferredoxin thioredoxin reductase variable alpha chain sync_2275 PF00156 Phosphoribosyl transferase domain sync_2276 PF06415 BPG-independent PGAM N-terminus (iPGM_N) sync_2276 PF01676 Metalloenzyme superfamily sync_2279 PF00909 Ammonium Transporter Family sync_2280 PF00909 Ammonium Transporter Family sync_2281 PF01741 Large-conductance mechanosensitive channel, MscL sync_2282 PF00118 TCP-1/cpn60 chaperonin family sync_2283 PF00166 Chaperonin 10 Kd subunit sync_2284 PF02874 ATP synthase alpha/beta family, beta-barrel domain sync_2284 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain sync_2285 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain sync_2286 PF04839 Plastid and cyanobacterial ribosomal protein (PSRP-3 / Ycf65) sync_2287 PF00923 Transaldolase/Fructose-6-phosphate aldolase sync_2289 PF01699 Sodium/calcium exchanger protein sync_2290 PF00557 Metallopeptidase family M24 sync_2290 PF05195 Aminopeptidase P, N-terminal domain sync_2291 PF00571 CBS domain sync_2291 PF01595 Cyclin M transmembrane N-terminal domain sync_2292 PF12631 MnmE helical domain sync_2292 PF10396 GTP-binding protein TrmE N-terminus sync_2292 PF01926 50S ribosome-binding GTPase sync_2293 PF01467 Cytidylyltransferase-like sync_2294 PF00795 Carbon-nitrogen hydrolase sync_2294 PF02540 NAD synthase sync_2295 PF01262 Alanine dehydrogenase/PNT, C-terminal domain sync_2295 PF05222 Alanine dehydrogenase/PNT, N-terminal domain sync_2299 PF06298 Photosystem II protein Y (PsbY) sync_2306 PF00421 Photosystem II protein sync_2307 PF02810 SEC-C motif sync_2308 PF11805 Protein of unknown function (DUF3326) sync_2310 PF00111 2Fe-2S iron-sulfur cluster binding domain sync_2312 PF00231 ATP synthase sync_2313 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain sync_2313 PF00306 ATP synthase alpha/beta chain, C terminal domain sync_2313 PF02874 ATP synthase alpha/beta family, beta-barrel domain sync_2314 PF00213 ATP synthase delta (OSCP) subunit sync_2315 PF00430 ATP synthase B/B' CF(0) sync_2317 PF00137 ATP synthase subunit C sync_2318 PF00119 ATP synthase A chain sync_2319 PF12966 N-ATPase, AtpR subunit sync_2320 PF13847 Methyltransferase domain sync_2321 PF00502 Phycobilisome protein sync_2321 PF00427 Phycobilisome Linker polypeptide sync_2323 PF00502 Phycobilisome protein sync_2324 PF00502 Phycobilisome protein sync_2325 PF01383 CpcD/allophycocyanin linker domain sync_2326 PF01098 Cell cycle protein sync_2328 PF05140 ResB-like family sync_2329 PF14489 QueF-like protein sync_2331 PF00543 Nitrogen regulatory protein P-II sync_2332 PF01728 FtsJ-like methyltransferase sync_2332 PF01479 S4 domain sync_2334 PF10397 Adenylosuccinate lyase C-terminus sync_2334 PF00206 Lyase sync_2336 PF00206 Lyase sync_2336 PF10415 Fumarase C C-terminus sync_2337 PF00270 DEAD/DEAH box helicase sync_2337 PF00271 Helicase conserved C-terminal domain sync_2337 PF08148 DSHCT (NUC185) domain sync_2338 PF00155 Aminotransferase class I and II sync_2340 PF08241 Methyltransferase domain sync_2343 PF00202 Aminotransferase class-III sync_2345 PF00684 DnaJ central domain sync_2345 PF00226 DnaJ domain sync_2345 PF01556 DnaJ C terminal domain sync_2346 PF02527 rRNA small subunit methyltransferase G sync_2353 PF00474 Sodium:solute symporter family sync_2354 PF04055 Radical SAM superfamily sync_2356 PF04998 RNA polymerase Rpb1, domain 5 sync_2356 PF05000 RNA polymerase Rpb1, domain 4 sync_2356 PF04983 RNA polymerase Rpb1, domain 3 sync_2357 PF00623 RNA polymerase Rpb1, domain 2 sync_2357 PF04983 RNA polymerase Rpb1, domain 3 sync_2357 PF04997 RNA polymerase Rpb1, domain 1 sync_2358 PF04561 RNA polymerase Rpb2, domain 2 sync_2358 PF04560 RNA polymerase Rpb2, domain 7 sync_2358 PF00562 RNA polymerase Rpb2, domain 6 sync_2358 PF10385 RNA polymerase beta subunit external 1 domain sync_2358 PF04565 RNA polymerase Rpb2, domain 3 sync_2358 PF04563 RNA polymerase beta subunit sync_2360 PF01026 TatD related DNase sync_2361 PF01649 Ribosomal protein S20 sync_2362 PF00815 Histidinol dehydrogenase sync_2363 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) sync_2364 PF13180 PDZ domain sync_2366 PF00497 Bacterial extracellular solute-binding proteins, family 3 sync_2366 PF00072 Response regulator receiver domain sync_2366 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase sync_2366 PF00512 His Kinase A (phospho-acceptor) domain sync_2366 PF01627 Hpt domain sync_2366 PF00989 PAS fold sync_2368 PF04055 Radical SAM superfamily sync_2370 PF02576 RimP N-terminal domain sync_2371 PF00575 S1 RNA binding domain sync_2371 PF08529 NusA N-terminal domain sync_2371 PF13184 NusA-like KH domain sync_2373 PF00009 Elongation factor Tu GTP binding domain sync_2373 PF04760 Translation initiation factor IF-2, N-terminal region sync_2373 PF11987 Translation-initiation factor 2 sync_2377 PF00156 Phosphoribosyl transferase domain sync_2379 PF02069 Prokaryotic metallothionein sync_2384 PF00124 Photosynthetic reaction centre protein sync_2389 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family sync_2390 PF13409 Glutathione S-transferase, N-terminal domain sync_2392 PF12848 ABC transporter sync_2392 PF16326 ABC transporter C-terminal domain sync_2392 PF00005 ABC transporter sync_2394 PF01018 GTP1/OBG sync_2394 PF01926 50S ribosome-binding GTPase sync_2395 PF17912 MalK OB fold domain sync_2395 PF00005 ABC transporter sync_2396 PF00488 MutS domain V sync_2396 PF01713 Smr domain sync_2398 PF00490 Delta-aminolevulinic acid dehydratase sync_2399 PF01556 DnaJ C terminal domain sync_2399 PF00226 DnaJ domain sync_2401 PF00916 Sulfate permease family sync_2401 PF01740 STAS domain sync_2424 PF00067 Cytochrome P450 sync_2437 PF01925 Sulfite exporter TauE/SafE sync_2450 PF01170 Putative RNA methylase family UPF0020 sync_2450 PF02926 THUMP domain sync_2454 PF02463 RecF/RecN/SMC N terminal domain sync_2454 PF06470 SMC proteins Flexible Hinge Domain sync_2456 PF01641 SelR domain sync_2459 PF00289 Biotin carboxylase, N-terminal domain sync_2459 PF02785 Biotin carboxylase C-terminal domain sync_2459 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain sync_2461 PF06596 Photosystem II reaction centre X protein (PsbX) sync_2462 PF07444 Ycf66 protein N-terminus sync_2466 PF00005 ABC transporter sync_2466 PF06472 ABC transporter transmembrane region 2 sync_2467 PF01230 HIT domain sync_2468 PF13335 Magnesium chelatase, subunit ChlI C-terminal sync_2468 PF01078 Magnesium chelatase, subunit ChlI sync_2470 PF01165 Ribosomal protein S21 sync_2473 PF01327 Polypeptide deformylase sync_2475 PF00596 Class II Aldolase and Adducin N-terminal domain sync_2476 PF01008 Initiation factor 2 subunit family sync_2479 PF13649 Methyltransferase domain sync_2480 PF00266 Aminotransferase class-V sync_2481 PF01458 Uncharacterized protein family (UPF0051) sync_2482 PF00005 ABC transporter sync_2483 PF01458 Uncharacterized protein family (UPF0051) sync_2484 PF02943 Ferredoxin thioredoxin reductase catalytic beta chain sync_2487 PF09367 CpeS-like protein sync_2488 PF00427 Phycobilisome Linker polypeptide sync_2491 PF13091 PLD-like domain sync_2497 PF03209 PUCC protein sync_2500 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III sync_2500 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II sync_2500 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain sync_2500 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I sync_2502 PF00873 AcrB/AcrD/AcrF family sync_2503 PF13533 Biotin-lipoyl like sync_2504 PF12002 MgsA AAA+ ATPase C terminal sync_2504 PF16193 AAA C-terminal domain sync_2504 PF00004 ATPase family associated with various cellular activities (AAA) sync_2508 PF00578 AhpC/TSA family sync_2509 PF03309 Type III pantothenate kinase sync_2510 PF01507 Phosphoadenosine phosphosulfate reductase family sync_2511 PF07992 Pyridine nucleotide-disulphide oxidoreductase sync_2512 PF01926 50S ribosome-binding GTPase sync_2512 PF13167 GTP-binding GTPase N-terminal sync_2512 PF16360 GTP-binding GTPase Middle Region sync_2514 PF02386 Cation transport protein sync_2515 PF02080 TrkA-C domain sync_2515 PF02254 TrkA-N domain sync_2516 PF03702 Anhydro-N-acetylmuramic acid kinase sync_2522 PF00005 ABC transporter sync_2522 PF12848 ABC transporter sync_2522 PF16326 ABC transporter C-terminal domain sync_2523 PF13180 PDZ domain sync_2527 PF04408 Helicase associated domain (HA2) sync_2527 PF00271 Helicase conserved C-terminal domain sync_2527 PF08482 ATP-dependent helicase C-terminal sync_2527 PF00270 DEAD/DEAH box helicase sync_2530 PF02601 Exonuclease VII, large subunit sync_2530 PF13742 OB-fold nucleic acid binding domain sync_2540 PF00459 Inositol monophosphatase family sync_2543 PF02673 Bacitracin resistance protein BacA sync_2545 PF06514 Photosystem II 12 kDa extrinsic protein (PsbU) sync_2546 PF02910 Fumarate reductase flavoprotein C-term sync_2546 PF00890 FAD binding domain sync_2547 PF07884 Vitamin K epoxide reductase family sync_2548 PF04055 Radical SAM superfamily sync_2548 PF18693 TRAM domain sync_2548 PF00919 Uncharacterized protein family UPF0004 sync_2549 PF07690 Major Facilitator Superfamily sync_2551 PF02310 B12 binding domain sync_2551 PF13282 Domain of unknown function (DUF4070) sync_2551 PF04055 Radical SAM superfamily sync_2552 PF14251 Domain of unknown function (DUF4346) sync_2557 PF01202 Shikimate kinase sync_2562 PF02033 Ribosome-binding factor A sync_2563 PF00933 Glycosyl hydrolase family 3 N terminal domain sync_2564 PF00535 Glycosyl transferase family 2 sync_2564 PF13181 Tetratricopeptide repeat sync_2565 PF02602 Uroporphyrinogen-III synthase HemD sync_2568 PF01593 Flavin containing amine oxidoreductase sync_2569 PF01521 Iron-sulphur cluster biosynthesis sync_2573 PF01370 NAD dependent epimerase/dehydratase family sync_2573 PF08338 Domain of unknown function (DUF1731) sync_2574 PF02080 TrkA-C domain sync_2574 PF03471 Transporter associated domain sync_2574 PF00999 Sodium/hydrogen exchanger family sync_2575 PF11910 Cyanobacterial and plant NDH-1 subunit O sync_2576 PF01556 DnaJ C terminal domain sync_2576 PF00684 DnaJ central domain sync_2576 PF00226 DnaJ domain sync_2577 PF00291 Pyridoxal-phosphate dependent enzyme sync_2579 PF04966 Carbohydrate-selective porin, OprB family sync_2579 PF00395 S-layer homology domain sync_2581 PF00395 S-layer homology domain sync_2581 PF04966 Carbohydrate-selective porin, OprB family sync_2586 PF00124 Photosynthetic reaction centre protein sync_2588 PF00005 ABC transporter sync_2591 PF00486 Transcriptional regulatory protein, C terminal sync_2591 PF00072 Response regulator receiver domain sync_2592 PF09115 DNA polymerase III, delta subunit, C terminal sync_2593 PF02223 Thymidylate kinase sync_2594 PF00403 Heavy-metal-associated domain sync_2596 PF18073 Rubredoxin metal binding domain sync_2596 PF06745 KaiC sync_2597 PF00072 Response regulator receiver domain sync_2597 PF00486 Transcriptional regulatory protein, C terminal sync_2598 PF02504 Fatty acid synthesis protein sync_2599 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III sync_2599 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal sync_2600 PF00698 Acyl transferase domain sync_2601 PF01553 Acyltransferase sync_2601 PF00501 AMP-binding enzyme sync_2601 PF13193 AMP-binding enzyme C-terminal domain sync_2603 PF00814 Glycoprotease family sync_2605 PF01743 Poly A polymerase head domain sync_2605 PF13735 tRNA nucleotidyltransferase domain 2 putative sync_2605 PF12627 Probable RNA and SrmB- binding site of polymerase A sync_2608 PF01593 Flavin containing amine oxidoreductase sync_2609 PF10664 Cyanobacterial and plastid NDH-1 subunit M sync_2611 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family sync_2611 PF03466 LysR substrate binding domain sync_2613 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus sync_2613 PF00361 Proton-conducting membrane transporter sync_2613 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus sync_2614 PF00361 Proton-conducting membrane transporter sync_2617 PF00483 Nucleotidyl transferase sync_2619 PF00196 Bacterial regulatory proteins, luxR family sync_2619 PF00072 Response regulator receiver domain sync_2621 PF01513 ATP-NAD kinase sync_2622 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L sync_2623 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 sync_2624 PF13237 4Fe-4S dicluster domain sync_2625 PF00146 NADH dehydrogenase sync_2626 PF00285 Citrate synthase, C-terminal domain sync_2630 PF01628 HrcA protein C terminal domain sync_2633 PF00291 Pyridoxal-phosphate dependent enzyme sync_2635 PF01253 Translation initiation factor SUI1 sync_2637 PF01594 AI-2E family transporter sync_2638 PF00731 AIR carboxylase sync_2639 PF01979 Amidohydrolase family sync_2640 PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus sync_2641 PF00849 RNA pseudouridylate synthase sync_2642 PF00072 Response regulator receiver domain sync_2642 PF00486 Transcriptional regulatory protein, C terminal sync_2644 PF00266 Aminotransferase class-V sync_2647 PF01795 MraW methylase family sync_2648 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit sync_2650 PF03061 Thioesterase superfamily sync_2653 PF00501 AMP-binding enzyme sync_2655 PF01040 UbiA prenyltransferase family sync_2656 PF00425 chorismate binding enzyme sync_2657 PF02951 Prokaryotic glutathione synthetase, N-terminal domain sync_2657 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain sync_2658 PF00462 Glutaredoxin sync_2661 PF02130 Uncharacterized protein family UPF0054 sync_2662 PF01219 Prokaryotic diacylglycerol kinase sync_2663 PF00117 Glutamine amidotransferase class-I sync_2665 PF00710 Asparaginase, N-terminal sync_2665 PF17763 Glutaminase/Asparaginase C-terminal domain sync_2666 PF00155 Aminotransferase class I and II sync_2667 PF03485 Arginyl tRNA synthetase N terminal domain sync_2667 PF05746 DALR anticodon binding domain sync_2667 PF00750 tRNA synthetases class I (R) sync_2669 PF00465 Iron-containing alcohol dehydrogenase sync_2671 PF00990 Diguanylate cyclase, GGDEF domain sync_2671 PF00563 EAL domain sync_2671 PF08448 PAS fold sync_2671 PF08447 PAS fold sync_2679 PF01425 Amidase sync_2685 PF05552 Conserved TM helix sync_2685 PF00924 Mechanosensitive ion channel sync_2692 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain sync_2692 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain sync_2699 PF10396 GTP-binding protein TrmE N-terminus sync_2699 PF01926 50S ribosome-binding GTPase sync_2699 PF12631 MnmE helical domain sync_2701 PF02696 Uncharacterized ACR, YdiU/UPF0061 family sync_2702 PF02824 TGS domain sync_2702 PF04607 Region found in RelA / SpoT proteins sync_2702 PF13291 ACT domain sync_2703 PF08352 Oligopeptide/dipeptide transporter, C-terminal region sync_2703 PF00005 ABC transporter sync_2706 PF01479 S4 domain sync_2706 PF00849 RNA pseudouridylate synthase sync_2707 PF01926 50S ribosome-binding GTPase sync_2708 PF00582 Universal stress protein family sync_2709 PF00162 Phosphoglycerate kinase sync_2712 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase sync_2712 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase sync_2714 PF04101 Glycosyltransferase family 28 C-terminal domain sync_2714 PF03033 Glycosyltransferase family 28 N-terminal domain sync_2715 PF00155 Aminotransferase class I and II sync_2717 PF03958 Bacterial type II/III secretion system short domain sync_2717 PF00263 Bacterial type II and III secretion system protein sync_2721 PF01180 Dihydroorotate dehydrogenase sync_2722 PF00075 RNase H sync_2724 PF00542 Ribosomal protein L7/L12 C-terminal domain sync_2724 PF16320 Ribosomal protein L7/L12 dimerisation domain sync_2725 PF00466 Ribosomal protein L10 sync_2726 PF00687 Ribosomal protein L1p/L10e family sync_2727 PF00298 Ribosomal protein L11, RNA binding domain sync_2727 PF03946 Ribosomal protein L11, N-terminal domain sync_2728 PF02357 Transcription termination factor nusG sync_2728 PF00467 KOW motif sync_2729 PF00584 SecE/Sec61-gamma subunits of protein translocation complex sync_2730 PF00004 ATPase family associated with various cellular activities (AAA) sync_2730 PF07724 AAA domain (Cdc48 subfamily) sync_2730 PF17871 AAA lid domain sync_2730 PF02861 Clp amino terminal domain, pathogenicity island component sync_2730 PF10431 C-terminal, D2-small domain, of ClpB protein sync_2731 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily sync_2732 PF00113 Enolase, C-terminal TIM barrel domain sync_2732 PF03952 Enolase, N-terminal domain sync_2733 PF03109 ABC1 family sync_2736 PF01960 ArgJ family sync_2737 PF01121 Dephospho-CoA kinase sync_2739 PF02934 GatB/GatE catalytic domain sync_2739 PF02637 GatB domain sync_2741 PF00334 Nucleoside diphosphate kinase sync_2742 PF17810 Arginine decarboxylase helical bundle domain sync_2742 PF17944 Arginine decarboxylase C-terminal helical extension sync_2742 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain sync_2745 PF00211 Adenylate and Guanylate cyclase catalytic domain sync_2745 PF00672 HAMP domain sync_2766 PF00873 AcrB/AcrD/AcrF family sync_2768 PF02272 DHHA1 domain sync_2768 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain sync_2768 PF01411 tRNA synthetases class II (A) sync_2770 PF00176 SNF2 family N-terminal domain sync_2770 PF00271 Helicase conserved C-terminal domain sync_2770 PF12419 SNF2 Helicase protein sync_2776 PF03480 Bacterial extracellular solute-binding protein, family 7 sync_2778 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component sync_2779 PF00753 Metallo-beta-lactamase superfamily sync_2779 PF01613 Flavin reductase like domain sync_2780 PF00258 Flavodoxin sync_2780 PF01613 Flavin reductase like domain sync_2781 PF00301 Rubredoxin sync_2782 PF01638 HxlR-like helix-turn-helix sync_2784 PF02678 Pirin sync_2784 PF17954 Quercetinase C-terminal cupin domain sync_2788 PF02347 Glycine cleavage system P-protein sync_2789 PF01597 Glycine cleavage H-protein sync_2790 PF06838 Methionine gamma-lyase sync_2794 PF03948 Ribosomal protein L9, C-terminal domain sync_2794 PF01281 Ribosomal protein L9, N-terminal domain sync_2795 PF14528 LAGLIDADG-like domain sync_2795 PF03796 DnaB-like helicase C terminal domain sync_2795 PF00772 DnaB-like helicase N terminal domain sync_2795 PF03796 DnaB-like helicase C terminal domain sync_2795 PF14528 LAGLIDADG-like domain sync_2795 PF00772 DnaB-like helicase N terminal domain sync_2796 PF01134 Glucose inhibited division protein A sync_2796 PF13932 GidA associated domain sync_2806 PF03119 NAD-dependent DNA ligase C4 zinc finger domain sync_2806 PF12826 Helix-hairpin-helix motif sync_2806 PF03120 NAD-dependent DNA ligase OB-fold domain sync_2806 PF00533 BRCA1 C Terminus (BRCT) domain sync_2806 PF01653 NAD-dependent DNA ligase adenylation domain sync_2809 PF09335 SNARE associated Golgi protein sync_2812 PF00924 Mechanosensitive ion channel sync_2815 PF00005 ABC transporter sync_2818 PF12794 Mechanosensitive ion channel inner membrane domain 1 sync_2818 PF00924 Mechanosensitive ion channel sync_2818 PF12795 Mechanosensitive ion channel porin domain sync_2820 PF00990 Diguanylate cyclase, GGDEF domain sync_2820 PF13188 PAS domain sync_2820 PF03707 Bacterial signalling protein N terminal repeat sync_2820 PF00563 EAL domain sync_2821 PF08264 Anticodon-binding domain of tRNA sync_2821 PF10458 Valyl tRNA synthetase tRNA binding arm sync_2821 PF00133 tRNA synthetases class I (I, L, M and V) sync_2822 PF10458 Valyl tRNA synthetase tRNA binding arm sync_2822 PF00133 tRNA synthetases class I (I, L, M and V) sync_2822 PF08264 Anticodon-binding domain of tRNA sync_2823 PF08264 Anticodon-binding domain of tRNA sync_2823 PF00133 tRNA synthetases class I (I, L, M and V) sync_2823 PF10458 Valyl tRNA synthetase tRNA binding arm sync_2824 PF00924 Mechanosensitive ion channel sync_2825 PF08264 Anticodon-binding domain of tRNA sync_2825 PF00133 tRNA synthetases class I (I, L, M and V) sync_2825 PF10458 Valyl tRNA synthetase tRNA binding arm sync_2830 PF00106 short chain dehydrogenase sync_2839 PF00762 Ferrochelatase sync_2841 PF00111 2Fe-2S iron-sulfur cluster binding domain sync_2846 PF03819 MazG nucleotide pyrophosphohydrolase domain sync_2847 PF00472 RF-1 domain sync_2850 PF17284 Spermidine synthase tetramerisation domain sync_2851 PF00491 Arginase family sync_2853 PF01571 Aminomethyltransferase folate-binding domain sync_2853 PF08669 Glycine cleavage T-protein C-terminal barrel domain sync_2854 PF01336 OB-fold nucleic acid binding domain sync_2854 PF00152 tRNA synthetases class II (D, K and N) sync_2854 PF02938 GAD domain sync_2855 PF00140 Sigma-70 factor, region 1.2 sync_2855 PF04542 Sigma-70 region 2 sync_2855 PF04545 Sigma-70, region 4 sync_2855 PF04539 Sigma-70 region 3 sync_2856 PF00210 Ferritin-like domain sync_2857 PF00106 short chain dehydrogenase sync_2857 PF00300 Histidine phosphatase superfamily (branch 1) sync_2858 PF06418 CTP synthase N-terminus sync_2858 PF00117 Glutamine amidotransferase class-I sync_2859 PF04055 Radical SAM superfamily sync_2861 PF00664 ABC transporter transmembrane region sync_2861 PF03412 Peptidase C39 family sync_2861 PF00005 ABC transporter sync_2863 PF03974 Ecotin sync_2864 PF06508 Queuosine biosynthesis protein QueC sync_2865 PF00425 chorismate binding enzyme sync_2865 PF04715 Anthranilate synthase component I, N terminal region sync_2867 PF13520 Amino acid permease sync_2868 PF00005 ABC transporter sync_2869 PF12399 Branched-chain amino acid ATP-binding cassette transporter sync_2869 PF00005 ABC transporter sync_2871 PF02653 Branched-chain amino acid transport system / permease component sync_2872 PF13458 Periplasmic binding protein sync_2873 PF02492 CobW/HypB/UreG, nucleotide-binding domain sync_2874 PF01730 UreF sync_2875 PF05194 UreE urease accessory protein, C-terminal domain sync_2876 PF01774 UreD urease accessory protein sync_2877 PF00547 Urease, gamma subunit sync_2878 PF00699 Urease beta subunit sync_2879 PF01979 Amidohydrolase family sync_2879 PF00449 Urease alpha-subunit, N-terminal domain sync_2880 PF00117 Glutamine amidotransferase class-I sync_2880 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain sync_2881 PF14403 Circularly permuted ATP-grasp type 2 sync_2885 PF06463 Molybdenum Cofactor Synthesis C sync_2885 PF04055 Radical SAM superfamily sync_2886 PF12804 MobA-like NTP transferase domain sync_2887 PF07690 Major Facilitator Superfamily sync_2888 PF01568 Molydopterin dinucleotide binding domain sync_2888 PF04879 Molybdopterin oxidoreductase Fe4S4 domain sync_2888 PF00384 Molybdopterin oxidoreductase sync_2891 PF01967 MoaC family sync_2892 PF03453 MoeA N-terminal region (domain I and II) sync_2892 PF00994 Probable molybdopterin binding domain sync_2892 PF03454 MoeA C-terminal region (domain IV) sync_2893 PF02391 MoaE protein sync_2895 PF00994 Probable molybdopterin binding domain sync_2896 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases sync_2898 PF01077 Nitrite and sulphite reductase 4Fe-4S domain sync_2898 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain sync_2899 PF01226 Formate/nitrite transporter sync_2901 PF02560 Cyanate lyase C-terminal domain sync_2904 PF00591 Glycosyl transferase family, a/b domain sync_2904 PF02885 Glycosyl transferase family, helical bundle domain sync_2905 PF07690 Major Facilitator Superfamily sync_2906 PF13089 Polyphosphate kinase N-terminal domain sync_2906 PF17941 Polyphosphate kinase C-terminal domain 1 sync_2906 PF13090 Polyphosphate kinase C-terminal domain 2 sync_2906 PF02503 Polyphosphate kinase middle domain sync_2907 PF04539 Sigma-70 region 3 sync_2907 PF04545 Sigma-70, region 4 sync_2907 PF04542 Sigma-70 region 2 sync_2907 PF00140 Sigma-70 factor, region 1.2 sync_2909 PF00793 DAHP synthetase I family sync_2910 PF11791 Aconitate B N-terminal domain sync_2910 PF06434 Aconitate hydratase 2 N-terminus sync_2910 PF00330 Aconitase family (aconitate hydratase) sync_2911 PF00654 Voltage gated chloride channel sync_2914 PF04151 Bacterial pre-peptidase C-terminal domain sync_2914 PF00082 Subtilase family sync_2917 PF00551 Formyl transferase sync_2917 PF01842 ACT domain sync_2919 PF01266 FAD dependent oxidoreductase sync_2920 PF12849 PBP superfamily domain sync_2921 PF01757 Acyltransferase family sync_2923 PF00012 Hsp70 protein sync_2924 PF08501 Shikimate dehydrogenase substrate binding domain sync_2924 PF01488 Shikimate / quinate 5-dehydrogenase sync_2925 PF16166 Chloroplast import apparatus Tic20-like sync_2926 PF01250 Ribosomal protein S6 sync_2928 PF00764 Arginosuccinate synthase sync_2931 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 sync_2931 PF00953 Glycosyl transferase family 4 sync_2935 PF02222 ATP-grasp domain sync_2936 PF00862 Sucrose synthase sync_2936 PF00534 Glycosyl transferases group 1 sync_2939 PF17760 UvrA interaction domain sync_2939 PF17755 UvrA DNA-binding domain sync_2940 PF02463 RecF/RecN/SMC N terminal domain sync_2941 PF03109 ABC1 family sync_2943 PF00291 Pyridoxal-phosphate dependent enzyme