locus-tag	class	description
Syncc9605_0001	COG0592	DNA-directed DNA polymerase activity
Syncc9605_0003	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
Syncc9605_0005	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
Syncc9605_0007	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
Syncc9605_0010	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
Syncc9605_0011	COG0552	protein localization to endoplasmic reticulum
Syncc9605_0012	COG2208	phosphoserine phosphatase activity
Syncc9605_0013	COG0165	Argininosuccinate lyase
Syncc9605_0014	COG0724	RNA recognition motif
Syncc9605_0015	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
Syncc9605_0017	COG2081	HI0933 family
Syncc9605_0018	COG1459	type II secretion system
Syncc9605_0023	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
Syncc9605_0024	COG0484	heat shock protein binding
Syncc9605_0026	COG1162	GTPase activity
Syncc9605_0027	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
Syncc9605_0028	COG0812	UDP-N-acetylmuramate dehydrogenase activity
Syncc9605_0029	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
Syncc9605_0030	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
Syncc9605_0031	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
Syncc9605_0032	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
Syncc9605_0033	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
Syncc9605_0034	COG0511	ligase activity, forming carbon-carbon bonds
Syncc9605_0035	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
Syncc9605_0045	COG1903	Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A
Syncc9605_0046	COG0518	GMP synthase (glutamine-hydrolyzing) activity
Syncc9605_0046	COG0519	Catalyzes the synthesis of GMP from XMP
Syncc9605_0051	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
Syncc9605_0051	COG0438	transferase activity, transferring glycosyl groups
Syncc9605_0052	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
Syncc9605_0054	COG2022	thiamine diphosphate biosynthetic process
Syncc9605_0057	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
Syncc9605_0058	COG0291	Belongs to the bacterial ribosomal protein bL35 family
Syncc9605_0059	COG2385	sporulation resulting in formation of a cellular spore
Syncc9605_0060	COG1215	transferase activity, transferring glycosyl groups
Syncc9605_0062	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
Syncc9605_0064	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
Syncc9605_0065	COG0740	serine-type endopeptidase activity
Syncc9605_0066	COG0544	peptidyl-prolyl cis-trans isomerase activity
Syncc9605_0067	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
Syncc9605_0068	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
Syncc9605_0069	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
Syncc9605_0073	COG2082	Precorrin-8x methylmutase
Syncc9605_0074	COG0037	tRNA processing
Syncc9605_0077	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
Syncc9605_0078	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
Syncc9605_0080	COG0556	nucleotide-excision repair
Syncc9605_0081	COG0653	protein targeting
Syncc9605_0082	COG1045	serine acetyltransferase
Syncc9605_0083	COG1725	Transcriptional regulator
Syncc9605_0085	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
Syncc9605_0086	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
Syncc9605_0087	COG0187	DNA topoisomerase II activity
Syncc9605_0087	COG1372	Participates in initiation and elongation during chromosome replication
Syncc9605_0089	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
Syncc9605_0090	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
Syncc9605_0091	COG0386	Belongs to the glutathione peroxidase family
Syncc9605_0092	COG2239	Acts as a magnesium transporter
Syncc9605_0093	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
Syncc9605_0094	COG0596	Alpha beta hydrolase
Syncc9605_0095	COG0714	Associated with various cellular activities
Syncc9605_0099	COG1194	a g-specific adenine glycosylase
Syncc9605_0101	COG0802	atpase or kinase
Syncc9605_0102	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
Syncc9605_0103	COG0586	Pfam SNARE associated Golgi protein
Syncc9605_0104	COG0629	single-stranded DNA binding
Syncc9605_0106	COG1792	Involved in formation and maintenance of cell shape
Syncc9605_0110	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
Syncc9605_0114	COG4301	Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine
Syncc9605_0117	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
Syncc9605_0118	COG2255	four-way junction helicase activity
Syncc9605_0120	COG1473	amidohydrolase
Syncc9605_0123	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
Syncc9605_0124	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
Syncc9605_0125	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
Syncc9605_0126	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
Syncc9605_0127	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Syncc9605_0128	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
Syncc9605_0129	COG0662	Cupin 2, conserved barrel domain protein
Syncc9605_0129	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
Syncc9605_0130	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
Syncc9605_0132	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
Syncc9605_0139	COG2877	3-deoxy-8-phosphooctulonate synthase activity
Syncc9605_0141	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
Syncc9605_0149	COG0571	ribonuclease III activity
Syncc9605_0152	COG0058	SHG alpha-glucan phosphorylase activity
Syncc9605_0153	COG0475	glutathione-regulated potassium exporter activity
Syncc9605_0157	COG0277	FAD linked oxidase domain protein
Syncc9605_0159	COG0247	lactate metabolic process
Syncc9605_0161	COG0538	isocitrate dehydrogenase activity
Syncc9605_0164	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
Syncc9605_0166	COG5398	heme oxygenase
Syncc9605_0168	COG1132	(ABC) transporter
Syncc9605_0169	COG0438	transferase activity, transferring glycosyl groups
Syncc9605_0170	COG0438	transferase activity, transferring glycosyl groups
Syncc9605_0171	COG0438	transferase activity, transferring glycosyl groups
Syncc9605_0172	COG0438	transferase activity, transferring glycosyl groups
Syncc9605_0175	COG2877	3-deoxy-8-phosphooctulonate synthase activity
Syncc9605_0180	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
Syncc9605_0181	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
Syncc9605_0182	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
Syncc9605_0183	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
Syncc9605_0183	COG0517	IMP dehydrogenase activity
Syncc9605_0186	COG0709	Synthesizes selenophosphate from selenide and ATP
Syncc9605_0187	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
Syncc9605_0188	COG0124	histidyl-tRNA synthetase
Syncc9605_0190	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
Syncc9605_0201	COG4447	cellulose binding
Syncc9605_0203	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Syncc9605_0204	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Syncc9605_0205	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Syncc9605_0206	COG0391	Required for morphogenesis under gluconeogenic growth conditions
Syncc9605_0207	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
Syncc9605_0209	COG1240	Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX
Syncc9605_0209	COG1239	Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX
Syncc9605_0211	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
Syncc9605_0213	COG0415	Belongs to the DNA photolyase family
Syncc9605_0219	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
Syncc9605_0220	COG0131	Imidazoleglycerol-phosphate dehydratase
Syncc9605_0221	COG3670	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
Syncc9605_0223	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
Syncc9605_0227	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
Syncc9605_0230	COG0354	folic acid binding
Syncc9605_0231	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
Syncc9605_0233	COG1253	flavin adenine dinucleotide binding
Syncc9605_0234	COG0673	inositol 2-dehydrogenase activity
Syncc9605_0236	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
Syncc9605_0238	COG0343	queuine tRNA-ribosyltransferase activity
Syncc9605_0239	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
Syncc9605_0243	COG0138	bifunctional purine biosynthesis protein purh
Syncc9605_0246	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
Syncc9605_0247	COG0004	ammonium transporteR
Syncc9605_0248	COG1489	DNA binding
Syncc9605_0249	COG0728	peptidoglycan biosynthetic process
Syncc9605_0253	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
Syncc9605_0254	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
Syncc9605_0255	COG1058	Belongs to the CinA family
Syncc9605_0255	COG1546	Belongs to the CinA family
Syncc9605_0256	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
Syncc9605_0257	COG0066	3-isopropylmalate dehydratase activity
Syncc9605_0264	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
Syncc9605_0265	COG0193	aminoacyl-tRNA hydrolase activity
Syncc9605_0268	COG4372	Transposase
Syncc9605_0269	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
Syncc9605_0270	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
Syncc9605_0272	COG0717	Belongs to the dCTP deaminase family
Syncc9605_0274	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
Syncc9605_0276	COG0741	lytic transglycosylase activity
Syncc9605_0277	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
Syncc9605_0280	COG0220	tRNA (guanine-N7-)-methyltransferase activity
Syncc9605_0284	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
Syncc9605_0287	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
Syncc9605_0288	COG1402	creatininase
Syncc9605_0290	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
Syncc9605_0291	COG2094	Belongs to the DNA glycosylase MPG family
Syncc9605_0292	COG0540	Belongs to the ATCase OTCase family
Syncc9605_0296	COG3536	Protein conserved in bacteria
Syncc9605_0297	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
Syncc9605_0300	COG0529	Catalyzes the synthesis of activated sulfate
Syncc9605_0300	COG2046	Belongs to the sulfate adenylyltransferase family
Syncc9605_0301	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
Syncc9605_0304	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
Syncc9605_0308	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
Syncc9605_0310	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
Syncc9605_0311	COG0436	Aminotransferase
Syncc9605_0313	COG1530	ribonuclease E activity
Syncc9605_0314	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
Syncc9605_0317	COG2226	methyltransferase
Syncc9605_0318	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
Syncc9605_0319	COG0051	transcription antitermination factor activity, RNA binding
Syncc9605_0320	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
Syncc9605_0321	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
Syncc9605_0322	COG0049	tRNA binding
Syncc9605_0323	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
Syncc9605_0324	COG0316	Belongs to the HesB IscA family
Syncc9605_0326	COG0069	glutamate synthase activity
Syncc9605_0326	COG0067	glutamate synthase
Syncc9605_0326	COG0070	glutamate synthase
Syncc9605_0328	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
Syncc9605_0331	COG2885	chlorophyll binding
Syncc9605_0332	COG2885	chlorophyll binding
Syncc9605_0339	COG0463	Glycosyl transferase, family 2
Syncc9605_0345	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
Syncc9605_0347	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
Syncc9605_0348	COG0254	rRNA binding
Syncc9605_0349	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Syncc9605_0350	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
Syncc9605_0351	COG0101	tRNA pseudouridine synthase activity
Syncc9605_0352	COG0203	ribosomal protein L17
Syncc9605_0353	COG0202	RNA polymerase activity
Syncc9605_0354	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
Syncc9605_0355	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
Syncc9605_0356	COG0257	Belongs to the bacterial ribosomal protein bL36 family
Syncc9605_0357	COG0563	adenylate kinase activity
Syncc9605_0358	COG0201	protein transport
Syncc9605_0359	COG0200	Binds to the 23S rRNA
Syncc9605_0360	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
Syncc9605_0361	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
Syncc9605_0362	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
Syncc9605_0363	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
Syncc9605_0364	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
Syncc9605_0365	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
Syncc9605_0366	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
Syncc9605_0367	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
Syncc9605_0368	COG0255	Belongs to the universal ribosomal protein uL29 family
Syncc9605_0369	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
Syncc9605_0370	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
Syncc9605_0371	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
Syncc9605_0372	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
Syncc9605_0373	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
Syncc9605_0374	COG0089	rRNA binding
Syncc9605_0375	COG0088	Forms part of the polypeptide exit tunnel
Syncc9605_0376	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
Syncc9605_0379	COG3854	ATPases associated with a variety of cellular activities
Syncc9605_0381	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
Syncc9605_0386	COG1233	COG1233 Phytoene dehydrogenase and related
Syncc9605_0391	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
Syncc9605_0392	COG1606	tRNA processing
Syncc9605_0393	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
Syncc9605_0394	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
Syncc9605_0396	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
Syncc9605_0397	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
Syncc9605_0398	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
Syncc9605_0401	COG0772	Belongs to the SEDS family
Syncc9605_0402	COG0489	protein tyrosine kinase activity
Syncc9605_0403	COG0408	coproporphyrinogen oxidase activity
Syncc9605_0407	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
Syncc9605_0414	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
Syncc9605_0415	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
Syncc9605_0416	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
Syncc9605_0416	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
Syncc9605_0417	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
Syncc9605_0446	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
Syncc9605_0465	COG1070	Carbohydrate kinase
Syncc9605_0466	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
Syncc9605_0468	COG0539	negative regulation of cytoplasmic translation
Syncc9605_0469	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
Syncc9605_0473	COG0589	response to stress
Syncc9605_0475	COG0758	DNA mediated transformation
Syncc9605_0476	COG2890	protein-(glutamine-N5) methyltransferase activity
Syncc9605_0477	COG0009	L-threonylcarbamoyladenylate synthase
Syncc9605_0480	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
Syncc9605_0481	COG2894	cell division
Syncc9605_0482	COG0850	regulation of cytokinetic process
Syncc9605_0483	COG1078	dGTPase activity
Syncc9605_0484	COG0793	Belongs to the peptidase S41A family
Syncc9605_0485	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
Syncc9605_0486	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
Syncc9605_0489	COG4229	Bifunctional enzyme that catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK- MTPene)
Syncc9605_0490	COG0235	Class ii aldolase
Syncc9605_0491	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
Syncc9605_0492	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
Syncc9605_0495	COG0514	ATP-dependent DNA helicase (RecQ)
Syncc9605_0497	COG1012	belongs to the aldehyde dehydrogenase family
Syncc9605_0499	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
Syncc9605_0500	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
Syncc9605_0502	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
Syncc9605_0504	COG0659	secondary active sulfate transmembrane transporter activity
Syncc9605_0505	COG4243	Vitamin k epoxide reductase
Syncc9605_0506	COG0484	heat shock protein binding
Syncc9605_0507	COG0113	porphobilinogen synthase activity
Syncc9605_0509	COG1193	negative regulation of DNA recombination
Syncc9605_0510	COG3842	ATPase activity
Syncc9605_0511	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
Syncc9605_0514	COG0488	(ABC) transporter
Syncc9605_0516	COG0435	Glutathione S-transferase
Syncc9605_0517	COG2988	succinylglutamate desuccinylase activity
Syncc9605_0520	COG0028	Belongs to the TPP enzyme family
Syncc9605_0565	COG0582	viral genome integration into host DNA
Syncc9605_0568	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
Syncc9605_0570	COG1185	polyribonucleotide nucleotidyltransferase activity
Syncc9605_0571	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
Syncc9605_0572	COG0750	zinc metalloprotease
Syncc9605_0573	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
Syncc9605_0575	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
Syncc9605_0577	COG0706	membrane insertase activity
Syncc9605_0579	COG0594	ribonuclease P activity
Syncc9605_0580	COG0230	Belongs to the bacterial ribosomal protein bL34 family
Syncc9605_0583	COG0616	signal peptide processing
Syncc9605_0584	COG0697	spore germination
Syncc9605_0586	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
Syncc9605_0588	COG1842	Phage shock protein A
Syncc9605_0589	COG3118	belongs to the thioredoxin family
Syncc9605_0590	COG0436	Aminotransferase
Syncc9605_0591	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
Syncc9605_0591	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
Syncc9605_0592	COG0739	heme binding
Syncc9605_0593	COG0745	RESPONSE REGULATOR receiver
Syncc9605_0595	COG1136	(ABC) transporter
Syncc9605_0595	COG0577	efflux transmembrane transporter activity
Syncc9605_0596	COG1007	ATP synthesis coupled electron transport
Syncc9605_0597	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
Syncc9605_0600	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
Syncc9605_0606	COG1845	cytochrome c oxidase, subunit III
Syncc9605_0608	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
Syncc9605_0609	COG1612	heme a metabolic process
Syncc9605_0610	COG0109	protoheme IX farnesyltransferase activity
Syncc9605_0614	COG3010	Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
Syncc9605_0615	COG0459	protein refolding
Syncc9605_0617	COG1028	Short-chain dehydrogenase reductase Sdr
Syncc9605_0620	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
Syncc9605_0621	COG1619	proteins homologs of microcin C7 resistance protein MccF
Syncc9605_0622	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
Syncc9605_0625	COG2875	Belongs to the precorrin methyltransferase family
Syncc9605_0626	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
Syncc9605_0627	COG0739	heme binding
Syncc9605_0628	COG0723	plastoquinol--plastocyanin reductase activity
Syncc9605_0630	COG0805	protein transport
Syncc9605_0632	COG0194	GDP metabolic process
Syncc9605_0635	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
Syncc9605_0638	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
Syncc9605_0641	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
Syncc9605_0643	COG0335	large ribosomal subunit rRNA binding
Syncc9605_0645	COG0024	Methionine aminopeptidase
Syncc9605_0646	COG3000	fatty acid hydroxylase
Syncc9605_0646	COG0300	oxidoreductase activity
Syncc9605_0648	COG0857	belongs to the CobB CobQ family
Syncc9605_0652	COG1666	GTP binding
Syncc9605_0655	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
Syncc9605_0657	COG0295	cytidine deaminase activity
Syncc9605_0659	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
Syncc9605_0660	COG0277	FAD linked oxidase domain protein
Syncc9605_0661	COG0708	Exodeoxyribonuclease III
Syncc9605_0665	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
Syncc9605_0666	COG1641	Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes
Syncc9605_0672	COG0523	cobalamin synthesis protein
Syncc9605_0673	COG2154	pterin-4-alpha-carbinolamine dehydratase
Syncc9605_0674	COG0432	Pfam Uncharacterised protein family UPF0047
Syncc9605_0676	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
Syncc9605_0677	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
Syncc9605_0679	COG0181	hydroxymethylbilane synthase activity
Syncc9605_0681	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
Syncc9605_0682	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
Syncc9605_0684	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
Syncc9605_0690	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
Syncc9605_0691	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
Syncc9605_0693	COG0442	prolyl-tRNA aminoacylation
Syncc9605_0695	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
Syncc9605_0700	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
Syncc9605_0701	COG0588	phosphoglycerate mutase activity
Syncc9605_0704	COG0768	penicillin binding
Syncc9605_0705	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
Syncc9605_0708	COG0415	Belongs to the DNA photolyase family
Syncc9605_0710	COG0233	cytoplasmic translational termination
Syncc9605_0711	COG0528	UMP kinase activity
Syncc9605_0716	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
Syncc9605_0717	COG0028	Belongs to the TPP enzyme family
Syncc9605_0722	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
Syncc9605_0726	COG0539	negative regulation of cytoplasmic translation
Syncc9605_0728	COG3396	Phenylacetate-CoA oxygenase
Syncc9605_0729	COG5322	oxidoreductase activity
Syncc9605_0730	COG0825	malonyl-CoA metabolic process
Syncc9605_0731	COG4221	oxidoreductase activity
Syncc9605_0732	COG0302	gtp cyclohydrolase
Syncc9605_0733	COG0135	phosphoribosylanthranilate isomerase activity
Syncc9605_0734	COG1994	Peptidase M50
Syncc9605_0734	COG0517	IMP dehydrogenase activity
Syncc9605_0735	COG0095	Lipoate-protein ligase
Syncc9605_0736	COG0730	response to heat
Syncc9605_0741	COG1348	The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex which has 2 components the iron protein and the molybdenum-iron protein
Syncc9605_0745	COG1231	oxidoreductase activity
Syncc9605_0746	COG2710	Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein
Syncc9605_0747	COG2710	Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein
Syncc9605_0750	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
Syncc9605_0752	COG1850	ribulose-bisphosphate carboxylase activity
Syncc9605_0753	COG4451	ribulose bisphosphate carboxylase, small
Syncc9605_0759	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
Syncc9605_0760	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Syncc9605_0766	COG1492	cobalamin metabolic process
Syncc9605_0768	COG0424	maF-like protein
Syncc9605_0787	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
Syncc9605_0788	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
Syncc9605_0790	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
Syncc9605_0796	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
Syncc9605_0797	COG0579	oxidoreductase
Syncc9605_0799	COG0481	GTPase activity
Syncc9605_0800	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
Syncc9605_0802	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
Syncc9605_0803	COG3695	enzyme binding
Syncc9605_0804	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
Syncc9605_0804	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
Syncc9605_0805	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
Syncc9605_0806	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
Syncc9605_0808	COG0107	imidazoleglycerol-phosphate synthase activity
Syncc9605_0809	COG2226	methyltransferase
Syncc9605_0812	COG0752	glycyl-tRNA synthetase alpha subunit
Syncc9605_0820	COG0028	Belongs to the TPP enzyme family
Syncc9605_0830	COG2267	carboxylic ester hydrolase activity
Syncc9605_0831	COG0515	serine threonine protein kinase
Syncc9605_0831	COG1262	PFAM Formylglycine-generating sulfatase enzyme
Syncc9605_0833	COG3659	wide pore channel activity
Syncc9605_0837	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
Syncc9605_0838	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
Syncc9605_0839	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
Syncc9605_0840	COG0740	serine-type endopeptidase activity
Syncc9605_0841	COG0740	serine-type endopeptidase activity
Syncc9605_0842	COG4956	integral membrane protein (PIN domain superfamily)
Syncc9605_0843	COG0635	Involved in the biosynthesis of porphyrin-containing compound
Syncc9605_0845	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
Syncc9605_0846	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
Syncc9605_0849	COG1181	Belongs to the D-alanine--D-alanine ligase family
Syncc9605_0850	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
Syncc9605_0851	COG4948	Mandelate Racemase Muconate Lactonizing
Syncc9605_0857	COG0285	dihydrofolate synthase activity
Syncc9605_0858	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
Syncc9605_0866	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
Syncc9605_0868	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
Syncc9605_0869	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
Syncc9605_0870	COG0134	indole-3-glycerol-phosphate synthase activity
Syncc9605_0876	COG0815	Transfers the fatty acyl group on membrane lipoproteins
Syncc9605_0877	COG0482	sulfurtransferase activity
Syncc9605_0878	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
Syncc9605_0878	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
Syncc9605_0879	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
Syncc9605_0880	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
Syncc9605_0882	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
Syncc9605_0883	COG0228	four-way junction DNA binding
Syncc9605_0884	COG1702	phosphate starvation-inducible protein PhoH
Syncc9605_0885	COG0670	Belongs to the BI1 family
Syncc9605_0890	COG0336	Belongs to the RNA methyltransferase TrmD family
Syncc9605_0892	COG1691	(AIR) carboxylase
Syncc9605_0896	COG0352	thiamine-phosphate diphosphorylase activity
Syncc9605_0897	COG0196	riboflavin kinase activity
Syncc9605_0899	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
Syncc9605_0900	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
Syncc9605_0914	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
Syncc9605_0922	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
Syncc9605_0922	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
Syncc9605_0924	COG2135	peptidase activity
Syncc9605_0925	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
Syncc9605_0926	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
Syncc9605_0929	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
Syncc9605_0936	COG4974	Belongs to the 'phage' integrase family
Syncc9605_0965	COG0251	oxidation-reduction process
Syncc9605_0966	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
Syncc9605_0967	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
Syncc9605_0968	COG1132	(ABC) transporter
Syncc9605_0969	COG0456	acetyltransferase
Syncc9605_0972	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
Syncc9605_0973	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
Syncc9605_0976	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
Syncc9605_0979	COG1845	cytochrome c oxidase, subunit III
Syncc9605_0980	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
Syncc9605_0981	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
Syncc9605_0984	COG0530	calcium, potassium:sodium antiporter activity
Syncc9605_0985	COG0659	secondary active sulfate transmembrane transporter activity
Syncc9605_0986	COG0418	dihydroorotase activity
Syncc9605_0990	COG0159	tryptophan synthase activity
Syncc9605_0993	COG2010	Cytochrome c
Syncc9605_1000	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
Syncc9605_1004	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
Syncc9605_1004	COG0140	phosphoribosyl-ATP diphosphatase activity
Syncc9605_1006	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
Syncc9605_1007	COG0542	response to heat
Syncc9605_1015	COG3794	PFAM blue (type 1) copper domain protein
Syncc9605_1017	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
Syncc9605_1018	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
Syncc9605_1025	COG1940	carbohydrate kinase activity
Syncc9605_1026	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
Syncc9605_1029	COG0339	signal peptide processing
Syncc9605_1030	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Syncc9605_1031	COG0083	homoserine kinase activity
Syncc9605_1034	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
Syncc9605_1037	COG0180	Tryptophanyl-tRNA synthetase
Syncc9605_1040	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
Syncc9605_1064	COG0828	Belongs to the bacterial ribosomal protein bS21 family
Syncc9605_1077	COG1116	anion transmembrane transporter activity
Syncc9605_1078	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
Syncc9605_1081	COG0375	protein maturation
Syncc9605_1082	COG0010	Belongs to the arginase family
Syncc9605_1088	COG0484	heat shock protein binding
Syncc9605_1095	COG3659	wide pore channel activity
Syncc9605_1096	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
Syncc9605_1097	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
Syncc9605_1100	COG0798	PFAM Bile acid sodium symporter
Syncc9605_1111	COG2144	transferase activity, transferring acyl groups
Syncc9605_1121	COG0681	Belongs to the peptidase S26 family
Syncc9605_1122	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
Syncc9605_1123	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
Syncc9605_1126	COG0297	glycogen (starch) synthase activity
Syncc9605_1128	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
Syncc9605_1129	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
Syncc9605_1131	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
Syncc9605_1132	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
Syncc9605_1133	COG2045	Belongs to the ComB family
Syncc9605_1134	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
Syncc9605_1135	COG0860	N-Acetylmuramoyl-L-alanine amidase
Syncc9605_1136	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
Syncc9605_1137	COG0142	geranyltranstransferase activity
Syncc9605_1138	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
Syncc9605_1139	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
Syncc9605_1141	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
Syncc9605_1142	COG2176	DNA-directed DNA polymerase activity
Syncc9605_1144	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
Syncc9605_1146	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
Syncc9605_1148	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
Syncc9605_1150	COG1132	(ABC) transporter
Syncc9605_1151	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
Syncc9605_1152	COG0505	Belongs to the CarA family
Syncc9605_1154	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
Syncc9605_1155	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
Syncc9605_1157	COG0154	amidase activity
Syncc9605_1158	COG0587	DNA-directed DNA polymerase activity
Syncc9605_1160	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
Syncc9605_1161	COG0632	four-way junction helicase activity
Syncc9605_1162	COG1006	Multisubunit Na H antiporter MnhC subunit
Syncc9605_1169	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
Syncc9605_1175	COG0358	DNA primase activity
Syncc9605_1179	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
Syncc9605_1183	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
Syncc9605_1186	COG0792	nuclease activity
Syncc9605_1187	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
Syncc9605_1188	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
Syncc9605_1190	COG0508	dehydrogenase complex catalyzes the overall conversion of
Syncc9605_1190	COG0022	dehydrogenase e1 component
Syncc9605_1191	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
Syncc9605_1192	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
Syncc9605_1196	COG0628	permease
Syncc9605_1198	COG2603	Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA
Syncc9605_1199	COG0515	serine threonine protein kinase
Syncc9605_1204	COG2226	methyltransferase
Syncc9605_1205	COG0174	glutamine synthetase
Syncc9605_1207	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
Syncc9605_1208	COG0590	tRNA wobble adenosine to inosine editing
Syncc9605_1211	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
Syncc9605_1214	COG0612	Peptidase, M16
Syncc9605_1215	COG0612	Peptidase, M16
Syncc9605_1221	COG1216	Glycosyl transferase, family 2
Syncc9605_1222	COG0052	Belongs to the universal ribosomal protein uS2 family
Syncc9605_1223	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
Syncc9605_1225	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
Syncc9605_1226	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
Syncc9605_1227	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
Syncc9605_1228	COG0751	glycine-tRNA ligase activity
Syncc9605_1240	COG0644	oxidoreductase
Syncc9605_1242	COG0826	peptidase U32
Syncc9605_1246	COG1137	ATPase activity
Syncc9605_1248	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
Syncc9605_1250	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
Syncc9605_1252	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
Syncc9605_1253	COG1494	fructose-1,6-bisphosphatase
Syncc9605_1254	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
Syncc9605_1255	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
Syncc9605_1256	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
Syncc9605_1257	COG0363	glucosamine-6-phosphate deaminase activity
Syncc9605_1260	COG0129	dihydroxy-acid dehydratase activity
Syncc9605_1262	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
Syncc9605_1271	COG0300	oxidoreductase activity
Syncc9605_1279	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
Syncc9605_1282	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
Syncc9605_1283	COG1122	ATPase activity
Syncc9605_1287	COG1836	PFAM Integral membrane protein DUF92
Syncc9605_1288	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
Syncc9605_1293	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
Syncc9605_1294	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
Syncc9605_1295	COG0436	Aminotransferase
Syncc9605_1297	COG1573	uracil-dna glycosylase
Syncc9605_1298	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
Syncc9605_1299	COG0793	Belongs to the peptidase S41A family
Syncc9605_1300	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
Syncc9605_1304	COG0861	Integral membrane protein TerC family
Syncc9605_1307	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
Syncc9605_1309	COG0312	modulator of DNA gyrase
Syncc9605_1310	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
Syncc9605_1313	COG0163	prenyltransferase activity
Syncc9605_1314	COG0557	exoribonuclease II activity
Syncc9605_1316	COG2119	membrane
Syncc9605_1318	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
Syncc9605_1318	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
Syncc9605_1319	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
Syncc9605_1322	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
Syncc9605_1323	COG1615	UPF0182 protein
Syncc9605_1324	COG0450	alkyl hydroperoxide reductase
Syncc9605_1326	COG0739	heme binding
Syncc9605_1327	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
Syncc9605_1334	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
Syncc9605_1336	COG0557	exoribonuclease II activity
Syncc9605_1337	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
Syncc9605_1338	COG0267	Belongs to the bacterial ribosomal protein bL33 family
Syncc9605_1339	COG0072	phenylalanine-tRNA ligase activity
Syncc9605_1340	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
Syncc9605_1348	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
Syncc9605_1355	COG0646	methionine synthase
Syncc9605_1355	COG1410	methionine synthase
Syncc9605_1356	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
Syncc9605_1359	COG0613	PHP domain protein
Syncc9605_1361	COG3046	protein related to deoxyribodipyrimidine photolyase
Syncc9605_1363	COG0322	excinuclease ABC activity
Syncc9605_1365	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
Syncc9605_1370	COG1104	cysteine desulfurase activity
Syncc9605_1371	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
Syncc9605_1380	COG0495	leucyl-tRNA aminoacylation
Syncc9605_1381	COG0166	Belongs to the GPI family
Syncc9605_1388	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
Syncc9605_1389	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
Syncc9605_1390	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
Syncc9605_1390	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
Syncc9605_1391	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
Syncc9605_1392	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
Syncc9605_1393	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
Syncc9605_1395	COG0484	heat shock protein binding
Syncc9605_1396	COG0443	Heat shock 70 kDa protein
Syncc9605_1397	COG0573	inorganic phosphate transmembrane transporter activity
Syncc9605_1398	COG0581	inorganic phosphate transmembrane transporter activity
Syncc9605_1399	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
Syncc9605_1400	COG3217	Mosc domain protein beta barrel domain protein
Syncc9605_1400	COG0633	Ferredoxin
Syncc9605_1401	COG0483	inositol monophosphate 1-phosphatase activity
Syncc9605_1402	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
Syncc9605_1404	COG0326	Molecular chaperone. Has ATPase activity
Syncc9605_1405	COG0227	Belongs to the bacterial ribosomal protein bL28 family
Syncc9605_1406	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
Syncc9605_1407	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
Syncc9605_1408	COG1653	transport
Syncc9605_1409	COG1175	transmembrane transport
Syncc9605_1429	COG0446	pyridine nucleotide-disulphide oxidoreductase
Syncc9605_1430	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
Syncc9605_1431	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
Syncc9605_1436	COG0469	pyruvate kinase activity
Syncc9605_1437	COG0577	efflux transmembrane transporter activity
Syncc9605_1437	COG1136	(ABC) transporter
Syncc9605_1438	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
Syncc9605_1440	COG0740	serine-type endopeptidase activity
Syncc9605_1444	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
Syncc9605_1448	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
Syncc9605_1450	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
Syncc9605_1456	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
Syncc9605_1462	COG1793	dna ligase
Syncc9605_1463	COG1201	RNA secondary structure unwinding
Syncc9605_1476	COG2226	methyltransferase
Syncc9605_1483	COG1119	ATPase activity
Syncc9605_1485	COG1108	ABC-type Mn2 Zn2 transport systems permease components
Syncc9605_1487	COG1121	(ABC) transporter
Syncc9605_1488	COG0803	Belongs to the bacterial solute-binding protein 9 family
Syncc9605_1489	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
Syncc9605_1490	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
Syncc9605_1507	COG2032	superoxide dismutase activity
Syncc9605_1510	COG0724	RNA recognition motif
Syncc9605_1529	COG2124	cytochrome p450
Syncc9605_1542	COG1611	Belongs to the LOG family
Syncc9605_1543	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
Syncc9605_1559	COG0405	Gamma-glutamyltransferase
Syncc9605_1570	COG0523	cobalamin synthesis protein
Syncc9605_1575	COG3659	wide pore channel activity
Syncc9605_1577	COG3128	pkhd-type hydroxylase
Syncc9605_1578	COG1840	ABC-type Fe3 transport system, periplasmic component
Syncc9605_1583	COG0492	ferredoxin-NADP+ reductase activity
Syncc9605_1584	COG0716	FMN binding
Syncc9605_1587	COG0267	Belongs to the bacterial ribosomal protein bL33 family
Syncc9605_1591	COG3659	wide pore channel activity
Syncc9605_1600	COG0701	Predicted permease
Syncc9605_1605	COG1121	(ABC) transporter
Syncc9605_1606	COG1108	ABC-type Mn2 Zn2 transport systems permease components
Syncc9605_1610	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
Syncc9605_1614	COG1640	4-alpha-glucanotransferase
Syncc9605_1616	COG1187	pseudouridine synthase activity
Syncc9605_1617	COG5002	protein histidine kinase activity
Syncc9605_1618	COG0745	RESPONSE REGULATOR receiver
Syncc9605_1620	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
Syncc9605_1621	COG1982	Orn Lys Arg decarboxylase major
Syncc9605_1622	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
Syncc9605_1623	COG0575	Belongs to the CDS family
Syncc9605_1625	COG0596	Alpha beta hydrolase
Syncc9605_1625	COG2226	methyltransferase
Syncc9605_1625	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
Syncc9605_1626	COG0371	Dehydrogenase
Syncc9605_1627	COG0542	response to heat
Syncc9605_1629	COG0019	diaminopimelate decarboxylase activity
Syncc9605_1630	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
Syncc9605_1631	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
Syncc9605_1632	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
Syncc9605_1638	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
Syncc9605_1639	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
Syncc9605_1642	COG0475	glutathione-regulated potassium exporter activity
Syncc9605_1642	COG0589	response to stress
Syncc9605_1643	COG1132	(ABC) transporter
Syncc9605_1645	COG0724	RNA recognition motif
Syncc9605_1648	COG0513	Belongs to the DEAD box helicase family
Syncc9605_1650	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
Syncc9605_1653	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
Syncc9605_1657	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
Syncc9605_1660	COG0271	Belongs to the BolA IbaG family
Syncc9605_1661	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
Syncc9605_1663	COG0745	RESPONSE REGULATOR receiver
Syncc9605_1686	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
Syncc9605_1688	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
Syncc9605_1764	COG0123	including yeast histone deacetylase and acetoin utilization protein
Syncc9605_1772	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
Syncc9605_1775	COG0735	belongs to the Fur family
Syncc9605_1800	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
Syncc9605_1806	COG1126	abc transporter atp-binding protein
Syncc9605_1807	COG0765	amino acid transport
Syncc9605_1808	COG4597	amino acid ABC transporter
Syncc9605_1809	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
Syncc9605_1810	COG0659	secondary active sulfate transmembrane transporter activity
Syncc9605_1817	COG0799	negative regulation of ribosome biogenesis
Syncc9605_1819	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
Syncc9605_1821	COG1115	amino acid carrier protein
Syncc9605_1823	COG1132	(ABC) transporter
Syncc9605_1825	COG0149	triose-phosphate isomerase activity
Syncc9605_1826	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
Syncc9605_1828	COG1429	ligase activity, forming nitrogen-metal bonds
Syncc9605_1829	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
Syncc9605_1831	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
Syncc9605_1834	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
Syncc9605_1839	COG0745	RESPONSE REGULATOR receiver
Syncc9605_1846	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
Syncc9605_1847	COG0640	Transcriptional regulator
Syncc9605_1849	COG0668	transmembrane transport
Syncc9605_1852	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
Syncc9605_1853	COG0047	phosphoribosylformylglycinamidine synthase activity
Syncc9605_1854	COG1619	proteins homologs of microcin C7 resistance protein MccF
Syncc9605_1857	COG0191	fructose-bisphosphate aldolase activity
Syncc9605_1858	COG0673	inositol 2-dehydrogenase activity
Syncc9605_1860	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
Syncc9605_1864	COG3954	Phosphoribulokinase
Syncc9605_1865	COG0473	3-isopropylmalate dehydrogenase activity
Syncc9605_1866	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
Syncc9605_1867	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
Syncc9605_1870	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
Syncc9605_1873	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
Syncc9605_1874	COG2197	response regulator
Syncc9605_1876	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
Syncc9605_1878	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
Syncc9605_1882	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
Syncc9605_1894	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
Syncc9605_1899	COG0705	Rhomboid family
Syncc9605_1906	COG1231	oxidoreductase activity
Syncc9605_1912	COG0308	aminopeptidase N
Syncc9605_1915	COG2205	protein histidine kinase activity
Syncc9605_1917	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
Syncc9605_1918	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
Syncc9605_1920	COG1797	cobyrinic acid a,c-diamide synthase activity
Syncc9605_1921	COG1254	Belongs to the acylphosphatase family
Syncc9605_1924	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
Syncc9605_1926	COG0142	geranyltranstransferase activity
Syncc9605_1928	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
Syncc9605_1929	COG1480	7TM receptor with intracellular HD hydrolase
Syncc9605_1931	COG0564	pseudouridine synthase activity
Syncc9605_1933	COG0011	TIGRFAM Protein of
Syncc9605_1938	COG0395	ABC-type sugar transport system, permease component
Syncc9605_1939	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
Syncc9605_1940	COG1543	Belongs to the glycosyl hydrolase 57 family
Syncc9605_1941	COG0644	oxidoreductase
Syncc9605_1942	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
Syncc9605_1943	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
Syncc9605_1944	COG0516	GMP reductase activity
Syncc9605_1945	COG3118	belongs to the thioredoxin family
Syncc9605_1946	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
Syncc9605_1947	COG0742	ribosomal rna small subunit methyltransferase
Syncc9605_1948	COG2010	Cytochrome c
Syncc9605_1949	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
Syncc9605_1952	COG1239	Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX
Syncc9605_1953	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
Syncc9605_1954	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
Syncc9605_1956	COG2166	iron-sulfur cluster assembly
Syncc9605_1957	COG0460	homoserine dehydrogenase
Syncc9605_1959	COG0747	negative chemotaxis
Syncc9605_1964	COG0012	GTP binding
Syncc9605_1966	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
Syncc9605_1966	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
Syncc9605_1967	COG0215	cysteine-tRNA ligase activity
Syncc9605_1969	COG0733	neurotransmitter:sodium symporter activity
Syncc9605_1970	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
Syncc9605_1971	COG3411	Ferredoxin
Syncc9605_1974	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
Syncc9605_1976	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
Syncc9605_1981	COG0492	ferredoxin-NADP+ reductase activity
Syncc9605_1982	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
Syncc9605_1984	COG2226	methyltransferase
Syncc9605_1986	COG0702	epimerase
Syncc9605_1988	COG2267	carboxylic ester hydrolase activity
Syncc9605_1989	COG0440	acetolactate synthase activity
Syncc9605_1990	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
Syncc9605_1996	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
Syncc9605_1998	COG2119	membrane
Syncc9605_2001	COG2217	Heavy metal translocating P-type atpase
Syncc9605_2008	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
Syncc9605_2011	COG1022	Amp-dependent synthetase and ligase
Syncc9605_2012	COG0321	lipoyl(octanoyl) transferase activity
Syncc9605_2013	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
Syncc9605_2014	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
Syncc9605_2015	COG1381	Involved in DNA repair and RecF pathway recombination
Syncc9605_2017	COG0438	transferase activity, transferring glycosyl groups
Syncc9605_2021	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
Syncc9605_2023	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
Syncc9605_2024	COG1799	cell septum assembly
Syncc9605_2025	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
Syncc9605_2027	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
Syncc9605_2028	COG1160	GTP binding
Syncc9605_2030	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
Syncc9605_2035	COG1088	dTDP-glucose 4,6-dehydratase activity
Syncc9605_2041	COG0114	fumarate hydratase activity
Syncc9605_2042	COG4581	dead DEAH box helicase
Syncc9605_2047	COG0385	Bile acid
Syncc9605_2048	COG0156	8-amino-7-oxononanoate synthase activity
Syncc9605_2051	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
Syncc9605_2052	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
Syncc9605_2055	COG0357	Ribosomal RNA small subunit methyltransferase G
Syncc9605_2063	COG0820	rRNA (adenine-C2-)-methyltransferase activity
Syncc9605_2064	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
Syncc9605_2065	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
Syncc9605_2066	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
Syncc9605_2067	COG0085	RNA polymerase activity
Syncc9605_2068	COG0084	hydrolase, TatD family'
Syncc9605_2069	COG0268	Binds directly to 16S ribosomal RNA
Syncc9605_2070	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
Syncc9605_2071	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
Syncc9605_2072	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
Syncc9605_2075	COG0641	radical SAM
Syncc9605_2078	COG0779	Required for maturation of 30S ribosomal subunits
Syncc9605_2079	COG0195	Participates in both transcription termination and antitermination
Syncc9605_2081	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
Syncc9605_2087	COG1053	succinate dehydrogenase
Syncc9605_2091	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
Syncc9605_2092	COG0776	regulation of translation
Syncc9605_2095	COG2211	Major facilitator Superfamily
Syncc9605_2096	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
Syncc9605_2099	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
Syncc9605_2100	COG0284	orotidine-5'-phosphate decarboxylase activity
Syncc9605_2102	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
Syncc9605_2108	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
Syncc9605_2114	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
Syncc9605_2117	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
Syncc9605_2118	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
Syncc9605_2120	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
Syncc9605_2122	COG0151	Belongs to the GarS family
Syncc9605_2123	COG5002	protein histidine kinase activity
Syncc9605_2124	COG0467	Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction
Syncc9605_2125	COG4251	negative regulation of phosphorylation
Syncc9605_2127	COG0261	This protein binds to 23S rRNA in the presence of protein L20
Syncc9605_2128	COG0211	Belongs to the bacterial ribosomal protein bL27 family
Syncc9605_2131	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
Syncc9605_2132	COG0217	transcriptional regulatory protein
Syncc9605_2143	COG0363	glucosamine-6-phosphate deaminase activity
Syncc9605_2144	COG2247	cell wall binding repeat
Syncc9605_2144	COG2385	sporulation resulting in formation of a cellular spore
Syncc9605_2145	COG1234	tRNA 3'-trailer cleavage
Syncc9605_2146	COG2010	Cytochrome c
Syncc9605_2149	COG2264	protein methyltransferase activity
Syncc9605_2150	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
Syncc9605_2153	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
Syncc9605_2160	COG0443	Heat shock 70 kDa protein
Syncc9605_2163	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
Syncc9605_2164	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
Syncc9605_2169	COG0459	protein refolding
Syncc9605_2170	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
Syncc9605_2171	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
Syncc9605_2172	COG0355	proton-transporting ATP synthase activity, rotational mechanism
Syncc9605_2175	COG0387	Pfam Sodium calcium exchanger
Syncc9605_2176	COG0006	proline dipeptidase activity
Syncc9605_2177	COG1253	flavin adenine dinucleotide binding
Syncc9605_2178	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
Syncc9605_2179	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
Syncc9605_2180	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
Syncc9605_2180	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
Syncc9605_2181	COG0686	Belongs to the AlaDH PNT family
Syncc9605_2182	COG3012	SEC-C Motif Domain Protein
Syncc9605_2183	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
Syncc9605_2185	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
Syncc9605_2187	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
Syncc9605_2188	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
Syncc9605_2189	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
Syncc9605_2190	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
Syncc9605_2192	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
Syncc9605_2193	COG0356	it plays a direct role in the translocation of protons across the membrane
Syncc9605_2195	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
Syncc9605_2196	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
Syncc9605_2200	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
Syncc9605_2202	COG0772	Belongs to the SEDS family
Syncc9605_2204	COG1333	cytochrome c biogenesis protein
Syncc9605_2205	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
Syncc9605_2209	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
Syncc9605_2212	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
Syncc9605_2215	COG3562	capsule polysaccharide
Syncc9605_2221	COG2089	acid synthase
Syncc9605_2237	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
Syncc9605_2239	COG2885	chlorophyll binding
Syncc9605_2250	COG0116	Belongs to the methyltransferase superfamily
Syncc9605_2255	COG1196	nuclear chromosome segregation
Syncc9605_2257	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
Syncc9605_2259	COG0439	Biotin carboxylase
Syncc9605_2262	COG0515	serine threonine protein kinase
Syncc9605_2265	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
Syncc9605_2266	COG4178	(ABC) transporter
Syncc9605_2267	COG0537	adenosine 5'-monophosphoramidase activity
Syncc9605_2274	COG0242	peptide deformylase activity
Syncc9605_2277	COG1970	mechanosensitive ion channel activity
Syncc9605_2279	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
Syncc9605_2280	COG0719	Fe-S assembly protein
Syncc9605_2281	COG0396	ATPase activity
Syncc9605_2282	COG0719	Fe-S assembly protein
Syncc9605_2283	COG4802	Ferredoxin thioredoxin reductase catalytic beta chain
Syncc9605_2287	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
Syncc9605_2293	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
Syncc9605_2297	COG0033	Phosphoglucomutase
Syncc9605_2302	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
Syncc9605_2304	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
Syncc9605_2307	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
Syncc9605_2308	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
Syncc9605_2309	COG0175	sulfate reduction
Syncc9605_2310	COG1252	NADH dehydrogenase
Syncc9605_2311	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
Syncc9605_2312	COG3273	potassium ion transport
Syncc9605_2312	COG0471	metal ion transport
Syncc9605_2313	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
Syncc9605_2314	COG0569	domain protein
Syncc9605_2315	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
Syncc9605_2319	COG0488	(ABC) transporter
Syncc9605_2320	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
Syncc9605_2322	COG1643	Atp-dependent helicase
Syncc9605_2324	COG1570	exodeoxyribonuclease VII activity
Syncc9605_2332	COG1968	undecaprenyl-diphosphatase activity
Syncc9605_2334	COG1555	photosystem II stabilization
Syncc9605_2335	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
Syncc9605_2336	COG4243	Vitamin k epoxide reductase
Syncc9605_2337	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
Syncc9605_2340	COG1032	radical SAM domain protein
Syncc9605_2345	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
Syncc9605_2350	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
Syncc9605_2352	COG0457	Tetratricopeptide repeat
Syncc9605_2352	COG0463	Glycosyl transferase, family 2
Syncc9605_2353	COG1587	Uroporphyrinogen-III synthase
Syncc9605_2356	COG3349	Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'
Syncc9605_2357	COG0316	Belongs to the HesB IscA family
Syncc9605_2361	COG1090	epimerase
Syncc9605_2364	COG0484	heat shock protein binding
Syncc9605_2365	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
Syncc9605_2366	COG3659	wide pore channel activity
Syncc9605_2367	COG3659	wide pore channel activity
Syncc9605_2377	COG1122	ATPase activity
Syncc9605_2378	COG0745	RESPONSE REGULATOR receiver
Syncc9605_2380	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
Syncc9605_2381	COG2217	Heavy metal translocating P-type atpase
Syncc9605_2382	COG3063	Type IV pilus biogenesis stability protein PilW
Syncc9605_2383	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
Syncc9605_2385	COG0416	fatty acid biosynthetic process
Syncc9605_2386	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
Syncc9605_2387	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
Syncc9605_2388	COG0204	Acyl-transferase
Syncc9605_2388	COG0318	PFAM AMP-dependent synthetase and ligase
Syncc9605_2390	COG1214	PFAM Peptidase M22, glycoprotease
Syncc9605_2393	COG0724	RNA recognition motif
Syncc9605_2394	COG1562	ergosterol biosynthetic process
Syncc9605_2395	COG3349	Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'
Syncc9605_2395	COG0493	'glutamate synthase
Syncc9605_2398	COG0583	DNA-binding transcription factor activity
Syncc9605_2400	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
Syncc9605_2401	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Syncc9605_2404	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
Syncc9605_2406	COG2197	response regulator
Syncc9605_2408	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
Syncc9605_2409	COG0713	ATP synthesis coupled electron transport
Syncc9605_2411	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Syncc9605_2412	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
Syncc9605_2413	COG0372	Belongs to the citrate synthase family
Syncc9605_2417	COG1420	regulation of RNA biosynthetic process
Syncc9605_2418	COG0133	tryptophan synthase activity
Syncc9605_2419	COG0023	Translation Initiation Factor
Syncc9605_2420	COG0529	Catalyzes the synthesis of activated sulfate
Syncc9605_2421	COG0628	permease
Syncc9605_2423	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
Syncc9605_2425	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
Syncc9605_2426	COG0564	pseudouridine synthase activity
Syncc9605_2427	COG0745	RESPONSE REGULATOR receiver
Syncc9605_2429	COG1104	cysteine desulfurase activity
Syncc9605_2431	COG0275	rRNA processing
Syncc9605_2432	COG0649	NAD binding
Syncc9605_2435	COG0824	Thioesterase
Syncc9605_2438	COG1575	Belongs to the MenA family. Type 1 subfamily
Syncc9605_2440	COG0189	ligase activity
Syncc9605_2441	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
Syncc9605_2442	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
Syncc9605_2444	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
Syncc9605_2445	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
Syncc9605_2446	COG0512	Glutamine amidotransferase of anthranilate synthase
Syncc9605_2449	COG0252	asparaginase activity
Syncc9605_2450	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
Syncc9605_2451	COG0018	arginyl-trna synthetase
Syncc9605_2452	COG0157	Belongs to the NadC ModD family
Syncc9605_2453	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
Syncc9605_2455	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
Syncc9605_2456	COG4172	Belongs to the ABC transporter superfamily
Syncc9605_2457	COG0564	pseudouridine synthase activity
Syncc9605_2458	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
Syncc9605_2459	COG0126	phosphoglycerate kinase activity
Syncc9605_2463	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
Syncc9605_2464	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
Syncc9605_2465	COG0167	dihydroorotate dehydrogenase activity
Syncc9605_2466	COG0328	RNA-DNA hybrid ribonuclease activity
Syncc9605_2468	COG0222	ribosome binding
Syncc9605_2469	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
Syncc9605_2470	COG0081	regulation of translation
Syncc9605_2471	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
Syncc9605_2472	COG0250	Participates in transcription elongation, termination and antitermination
Syncc9605_2473	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
Syncc9605_2474	COG0542	response to heat
Syncc9605_2475	COG0346	lactoylglutathione lyase activity
Syncc9605_2476	COG0148	phosphopyruvate hydratase activity
Syncc9605_2477	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
Syncc9605_2489	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
Syncc9605_2490	COG0237	dephospho-CoA kinase activity
Syncc9605_2497	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
Syncc9605_2505	COG0019	diaminopimelate decarboxylase activity
Syncc9605_2512	COG0105	UTP biosynthetic process
Syncc9605_2513	COG1166	arginine decarboxylase activity
Syncc9605_2514	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
Syncc9605_2518	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
Syncc9605_2520	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
Syncc9605_2525	COG0071	Belongs to the small heat shock protein (HSP20) family
Syncc9605_2530	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
Syncc9605_2530	COG0426	domain, Protein
Syncc9605_2532	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
Syncc9605_2532	COG0426	domain, Protein
Syncc9605_2535	COG1741	Belongs to the pirin family
Syncc9605_2538	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
Syncc9605_2538	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
Syncc9605_2539	COG0509	glycine decarboxylation via glycine cleavage system
Syncc9605_2540	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
Syncc9605_2542	COG0359	binds to the 23S rRNA
Syncc9605_2543	COG1372	Participates in initiation and elongation during chromosome replication
Syncc9605_2543	COG1372	Participates in initiation and elongation during chromosome replication
Syncc9605_2543	COG0305	Participates in initiation and elongation during chromosome replication
Syncc9605_2543	COG0305	Participates in initiation and elongation during chromosome replication
Syncc9605_2545	COG0445	tRNA wobble uridine modification
Syncc9605_2552	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
Syncc9605_2554	COG0398	Pfam SNARE associated Golgi protein
Syncc9605_2557	COG1131	(ABC) transporter
Syncc9605_2558	COG0525	valine-tRNA ligase activity
Syncc9605_2564	COG4221	oxidoreductase activity
Syncc9605_2579	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
Syncc9605_2583	COG0716	FMN binding
Syncc9605_2588	COG3956	TIGRFAM MazG family protein
Syncc9605_2589	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
Syncc9605_2590	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
Syncc9605_2591	COG0010	Belongs to the arginase family
Syncc9605_2594	COG0404	The glycine cleavage system catalyzes the degradation of glycine
Syncc9605_2595	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
Syncc9605_2596	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
Syncc9605_2598	COG0504	CTP synthase activity
Syncc9605_2599	COG0602	queuosine metabolic process
Syncc9605_2602	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
Syncc9605_2606	COG0366	Alpha amylase catalytic
Syncc9605_2607	COG0463	Glycosyl transferase, family 2
Syncc9605_2611	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
Syncc9605_2617	COG0411	ABC transporter
Syncc9605_2621	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
Syncc9605_2622	COG0830	nickel cation binding
Syncc9605_2623	COG2371	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
Syncc9605_2624	COG0829	nickel cation binding
Syncc9605_2625	COG0831	urea catabolic process
Syncc9605_2626	COG0832	Belongs to the urease beta subunit family
Syncc9605_2627	COG0804	urea catabolic process
Syncc9605_2628	COG0519	Catalyzes the synthesis of GMP from XMP
Syncc9605_2628	COG0518	GMP synthase (glutamine-hydrolyzing) activity
Syncc9605_2633	COG0367	asparagine synthase
Syncc9605_2634	COG0540	Belongs to the ATCase OTCase family
Syncc9605_2636	COG2308	Evidence 4 Homologs of previously reported genes of
Syncc9605_2640	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
Syncc9605_2641	COG0746	molybdenum cofactor guanylyltransferase activity
Syncc9605_2642	COG2223	nitrite transmembrane transporter activity
Syncc9605_2643	COG0243	molybdopterin cofactor binding
Syncc9605_2648	COG0315	cyclic pyranopterin monophosphate synthase activity
Syncc9605_2649	COG0303	'Molybdopterin
Syncc9605_2652	COG0314	molybdopterin synthase activity
Syncc9605_2653	COG0521	Mo-molybdopterin cofactor biosynthetic process
Syncc9605_2654	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
Syncc9605_2656	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
Syncc9605_2659	COG1513	Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide
Syncc9605_2660	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
Syncc9605_2663	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
Syncc9605_2664	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
Syncc9605_2665	COG0170	dolichyl monophosphate biosynthetic process
Syncc9605_2666	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
Syncc9605_2667	COG1049	propionate catabolic process, 2-methylcitrate cycle
Syncc9605_2669	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
Syncc9605_2671	COG0788	formyltetrahydrofolate deformylase activity
Syncc9605_2674	COG0443	Heat shock 70 kDa protein
Syncc9605_2675	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
Syncc9605_2677	COG0360	Binds together with S18 to 16S ribosomal RNA
Syncc9605_2679	COG0137	argininosuccinate synthase activity
Syncc9605_2682	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
Syncc9605_2687	COG1376	ErfK ybiS ycfS ynhG family protein
Syncc9605_2688	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
Syncc9605_2689	COG0438	transferase activity, transferring glycosyl groups
Syncc9605_2691	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
Syncc9605_2692	COG0497	DNA recombination
Syncc9605_2693	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
Syncc9605_2695	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine