CYB_0001 PF00308 Bacterial dnaA protein CYB_0001 PF08299 Bacterial dnaA protein helix-turn-helix CYB_0001 PF11638 DnaA N-terminal domain CYB_0003 PF08241 Methyltransferase domain CYB_0004 PF00004 ATPase family associated with various cellular activities (AAA) CYB_0004 PF01434 Peptidase family M41 CYB_0004 PF06480 FtsH Extracellular CYB_0005 PF00106 short chain dehydrogenase CYB_0008 PF00521 DNA gyrase/topoisomerase IV, subunit A CYB_0008 PF03989 DNA gyrase C-terminal domain, beta-propeller CYB_0009 PF00005 ABC transporter CYB_0009 PF12848 ABC transporter CYB_0009 PF16326 CYB_0009 CYB_0011 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein CYB_0014 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CYB_0014 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CYB_0014 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CYB_0014 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CYB_0017 PF01266 FAD dependent oxidoreductase CYB_0018 PF07282 CYB_0018 CYB_0018 PF12323 CYB_0018 CYB_0019 PF00239 Resolvase, N terminal domain CYB_0019 PF13411 MerR HTH family regulatory protein CYB_0020 PF05685 Putative restriction endonuclease CYB_0021 PF00223 Photosystem I psaA/psaB protein CYB_0022 PF00223 Photosystem I psaA/psaB protein CYB_0023 PF00449 Urease alpha-subunit, N-terminal domain CYB_0023 PF01979 Amidohydrolase family CYB_0024 PF00005 ABC transporter CYB_0024 PF08402 TOBE domain CYB_0025 PF00239 Resolvase, N terminal domain CYB_0025 PF13411 MerR HTH family regulatory protein CYB_0026 PF07282 CYB_0026 CYB_0026 PF12323 CYB_0026 CYB_0027 PF13416 Bacterial extracellular solute-binding protein CYB_0028 PF00512 His Kinase A (phospho-acceptor) domain CYB_0028 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYB_0028 PF08448 PAS fold CYB_0029 PF00528 Binding-protein-dependent transport system inner membrane component CYB_0031 PF04115 Ureidoglycolate hydrolase CYB_0033 PF00188 Cysteine-rich secretory protein family CYB_0034 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CYB_0034 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CYB_0035 PF13379 NMT1-like family CYB_0036 PF00528 Binding-protein-dependent transport system inner membrane component CYB_0037 PF00005 ABC transporter CYB_0037 PF13379 NMT1-like family CYB_0038 PF00005 ABC transporter CYB_0039 PF05685 Putative restriction endonuclease CYB_0040 PF00384 Molybdopterin oxidoreductase CYB_0040 PF01568 Molydopterin dinucleotide binding domain CYB_0040 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CYB_0041 PF01385 CYB_0041 CYB_0041 PF07282 CYB_0041 CYB_0042 PF09655 CYB_0042 CYB_0043 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CYB_0043 PF02843 Phosphoribosylglycinamide synthetase, C domain CYB_0043 PF02844 Phosphoribosylglycinamide synthetase, N domain CYB_0044 PF00535 Glycosyl transferase family 2 CYB_0045 PF01966 HD domain CYB_0046 PF13472 GDSL-like Lipase/Acylhydrolase family CYB_0047 PF00753 Metallo-beta-lactamase superfamily CYB_0047 PF07521 RNA-metabolising metallo-beta-lactamase CYB_0048 PF00701 Dihydrodipicolinate synthetase family CYB_0049 PF00881 Nitroreductase family CYB_0050 PF00591 Glycosyl transferase family, a/b domain CYB_0050 PF02885 Glycosyl transferase family, helical bundle domain CYB_0051 PF01134 Glucose inhibited division protein A CYB_0052 PF13586 CYB_0052 CYB_0053 PF13340 CYB_0053 CYB_0054 PF01636 Phosphotransferase enzyme family CYB_0055 PF04025 CYB_0055 CYB_0056 PF00625 Guanylate kinase CYB_0057 PF02675 S-adenosylmethionine decarboxylase CYB_0058 PF01564 Spermine/spermidine synthase CYB_0058 PF17284 CYB_0058 CYB_0059 PF00850 Histone deacetylase domain CYB_0060 PF01370 NAD dependent epimerase/dehydratase family CYB_0062 PF02410 Oligomerisation domain CYB_0063 PF01966 HD domain CYB_0064 PF00009 Elongation factor Tu GTP binding domain CYB_0064 PF00679 Elongation factor G C-terminus CYB_0064 PF03144 Elongation factor Tu domain 2 CYB_0064 PF06421 GTP-binding protein LepA C-terminus CYB_0065 PF01936 NYN domain CYB_0066 PF02091 Glycyl-tRNA synthetase alpha subunit CYB_0067 PF00227 Proteasome subunit CYB_0068 PF01926 50S ribosome-binding GTPase CYB_0068 PF05128 CYB_0068 CYB_0069 PF04248 Domain of unknown function (DUF427) CYB_0070 PF07676 WD40-like Beta Propeller Repeat CYB_0071 PF00155 Aminotransferase class I and II CYB_0073 PF00815 Histidinol dehydrogenase CYB_0074 PF12323 CYB_0074 CYB_0075 PF07282 CYB_0075 CYB_0076 PF02638 CYB_0076 CYB_0078 PF00849 RNA pseudouridylate synthase CYB_0079 PF00709 Adenylosuccinate synthetase CYB_0080 PF03572 Peptidase family S41 CYB_0081 PF01385 CYB_0081 CYB_0081 PF07282 CYB_0081 CYB_0082 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CYB_0082 PF05697 Bacterial trigger factor protein (TF) CYB_0082 PF05698 Bacterial trigger factor protein (TF) C-terminus CYB_0083 PF06305 CYB_0083 CYB_0084 PF01578 CYB_0084 CYB_0086 PF01594 CYB_0086 CYB_0087 PF01385 CYB_0087 CYB_0087 PF07282 CYB_0087 CYB_0088 PF02601 CYB_0088 CYB_0088 PF13742 CYB_0088 CYB_0089 PF02609 Exonuclease VII small subunit CYB_0090 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CYB_0090 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CYB_0092 PF12766 Pyridoxamine 5'-phosphate oxidase CYB_0093 PF00583 Acetyltransferase (GNAT) family CYB_0094 PF11866 CYB_0094 CYB_0095 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CYB_0096 PF01464 Transglycosylase SLT domain CYB_0096 PF13174 Tetratricopeptide repeat CYB_0096 PF13432 Tetratricopeptide repeat CYB_0097 PF00300 Histidine phosphatase superfamily (branch 1) CYB_0098 PF11282 CYB_0098 CYB_0099 PF01972 Serine dehydrogenase proteinase CYB_0100 PF00226 DnaJ domain CYB_0102 PF00487 CYB_0102 CYB_0103 PF01241 Photosystem I psaG / psaK CYB_0104 PF02533 Photosystem II 4 kDa reaction centre component CYB_0105 PF12263 CYB_0105 CYB_0106 PF13767 CYB_0106 CYB_0107 PF01078 Magnesium chelatase, subunit ChlI CYB_0108 PF11152 CYB_0108 CYB_0109 PF00565 Staphylococcal nuclease homologue CYB_0111 PF02517 CAAX protease self-immunity CYB_0112 PF12146 Putative lysophospholipase CYB_0113 PF00578 AhpC/TSA family CYB_0113 PF10417 C-terminal domain of 1-Cys peroxiredoxin CYB_0114 PF04079 Putative transcriptional regulators (Ypuh-like) CYB_0115 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains CYB_0115 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CYB_0115 PF01010 CYB_0115 CYB_0117 PF00436 Single-strand binding protein family CYB_0118 PF02571 CYB_0118 CYB_0119 PF02577 Bifunctional nuclease CYB_0120 PF03473 MOSC domain CYB_0120 PF03476 MOSC N-terminal beta barrel domain CYB_0121 PF04551 GcpE protein CYB_0124 PF10615 Protein of unknown function (DUF2470) CYB_0125 PF00462 Glutaredoxin CYB_0126 PF00476 DNA polymerase family A CYB_0126 PF01367 5'-3' exonuclease, C-terminal SAM fold CYB_0126 PF01612 3'-5' exonuclease CYB_0126 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CYB_0127 PF01522 Polysaccharide deacetylase CYB_0128 PF04012 CYB_0128 CYB_0129 PF01789 PsbP CYB_0130 PF00528 Binding-protein-dependent transport system inner membrane component CYB_0131 PF00149 Calcineurin-like phosphoesterase CYB_0132 PF00528 Binding-protein-dependent transport system inner membrane component CYB_0133 PF01837 CYB_0133 CYB_0134 PF04230 CYB_0134 CYB_0135 PF14261 CYB_0135 CYB_0136 PF06514 Photosystem II 12 kDa extrinsic protein (PsbU) CYB_0137 PF02347 Glycine cleavage system P-protein CYB_0139 PF10604 Polyketide cyclase / dehydrase and lipid transport CYB_0140 PF00578 AhpC/TSA family CYB_0141 PF03109 CYB_0141 CYB_0142 PF02353 Mycolic acid cyclopropane synthetase CYB_0143 PF02657 Fe-S metabolism associated domain CYB_0144 PF01297 Periplasmic solute binding protein family CYB_0145 PF00005 ABC transporter CYB_0147 PF00950 CYB_0147 CYB_0148 PF01783 Ribosomal L32p protein family CYB_0149 PF00226 DnaJ domain CYB_0150 PF11341 CYB_0150 CYB_0151 PF00753 Metallo-beta-lactamase superfamily CYB_0151 PF16123 CYB_0151 CYB_0152 PF07690 Major Facilitator Superfamily CYB_0153 PF02641 Uncharacterized ACR, COG1993 CYB_0154 PF02537 CYB_0154 CYB_0155 PF00582 Universal stress protein family CYB_0155 PF00999 Sodium/hydrogen exchanger family CYB_0156 PF09366 CYB_0156 CYB_0157 PF01502 Phosphoribosyl-AMP cyclohydrolase CYB_0157 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CYB_0159 PF00005 ABC transporter CYB_0160 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein CYB_0161 PF00528 Binding-protein-dependent transport system inner membrane component CYB_0162 PF06754 CYB_0162 CYB_0163 PF05845 Bacterial phosphonate metabolism protein (PhnH) CYB_0164 PF05861 CYB_0164 CYB_0165 PF06007 CYB_0165 CYB_0166 PF00005 ABC transporter CYB_0167 PF00005 ABC transporter CYB_0168 PF07969 Amidohydrolase family CYB_0169 PF01522 Polysaccharide deacetylase CYB_0169 PF09992 Predicted periplasmic protein (DUF2233) CYB_0170 PF01383 CpcD/allophycocyanin linker domain CYB_0171 PF13301 CYB_0171 CYB_0172 PF12483 CYB_0172 CYB_0174 PF00072 Response regulator receiver domain CYB_0174 PF00486 Transcriptional regulatory protein, C terminal CYB_0175 PF05685 Putative restriction endonuclease CYB_0176 PF00535 Glycosyl transferase family 2 CYB_0177 PF01740 STAS domain CYB_0178 PF14559 Tetratricopeptide repeat CYB_0179 PF00111 2Fe-2S iron-sulfur cluster binding domain CYB_0179 PF00211 Adenylate and Guanylate cyclase catalytic domain CYB_0180 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CYB_0180 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CYB_0181 PF00005 ABC transporter CYB_0181 PF06472 CYB_0181 CYB_0182 PF01969 Protein of unknown function DUF111 CYB_0183 PF11947 CYB_0183 CYB_0184 PF00312 Ribosomal protein S15 CYB_0185 PF02985 HEAT repeat CYB_0185 PF13646 HEAT repeats CYB_0186 PF00502 Phycobilisome protein CYB_0187 PF00437 Type II/IV secretion system protein CYB_0188 PF01227 GTP cyclohydrolase I CYB_0189 PF00106 short chain dehydrogenase CYB_0190 PF00005 ABC transporter CYB_0191 PF00293 NUDIX domain CYB_0192 PF00085 Thioredoxin CYB_0193 PF03641 Possible lysine decarboxylase CYB_0194 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CYB_0195 PF13413 Helix-turn-helix domain CYB_0195 PF13464 CYB_0195 CYB_0196 PF00849 RNA pseudouridylate synthase CYB_0196 PF01479 S4 domain CYB_0197 PF13340 CYB_0197 CYB_0198 PF13586 CYB_0198 CYB_0200 PF02033 Ribosome-binding factor A CYB_0202 PF00875 DNA photolyase CYB_0202 PF03441 FAD binding domain of DNA photolyase CYB_0203 PF13586 CYB_0203 CYB_0204 PF13340 CYB_0204 CYB_0206 PF00994 Probable molybdopterin binding domain CYB_0206 PF03453 MoeA N-terminal region (domain I and II) CYB_0206 PF03454 MoeA C-terminal region (domain IV) CYB_0207 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CYB_0208 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains CYB_0209 PF01899 CYB_0209 CYB_0211 PF03334 CYB_0211 CYB_0212 PF13244 CYB_0212 CYB_0214 PF04039 CYB_0214 CYB_0215 PF02142 MGS-like domain CYB_0215 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CYB_0215 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CYB_0216 PF00124 Photosynthetic reaction centre protein CYB_0217 PF00696 Amino acid kinase family CYB_0217 PF01842 ACT domain CYB_0217 PF13840 ACT domain CYB_0218 PF02163 Peptidase family M50 CYB_0220 PF05421 CYB_0220 CYB_0223 PF02441 Flavoprotein CYB_0224 PF12697 Alpha/beta hydrolase family CYB_0225 PF02570 Precorrin-8X methylmutase CYB_0227 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CYB_0227 PF05175 Methyltransferase small domain CYB_0228 PF01936 NYN domain CYB_0229 PF03749 Sugar fermentation stimulation protein CYB_0230 PF00925 GTP cyclohydrolase II CYB_0230 PF12471 CYB_0230 CYB_0231 PF03372 Endonuclease/Exonuclease/phosphatase family CYB_0232 PF04542 Sigma-70 region 2 CYB_0233 PF01385 CYB_0233 CYB_0233 PF07282 CYB_0233 CYB_0234 PF00528 Binding-protein-dependent transport system inner membrane component CYB_0235 PF01625 Peptide methionine sulfoxide reductase CYB_0236 PF00528 Binding-protein-dependent transport system inner membrane component CYB_0237 PF00528 Binding-protein-dependent transport system inner membrane component CYB_0238 PF00005 ABC transporter CYB_0238 PF03459 TOBE domain CYB_0239 PF13531 Bacterial extracellular solute-binding protein CYB_0240 PF13302 Acetyltransferase (GNAT) domain CYB_0240 PF13380 CoA binding domain CYB_0240 PF13549 ATP-grasp domain CYB_0240 PF13607 Succinyl-CoA ligase like flavodoxin domain CYB_0241 PF00171 Aldehyde dehydrogenase family CYB_0241 PF00465 Iron-containing alcohol dehydrogenase CYB_0242 PF02566 OsmC-like protein CYB_0243 PF04055 Radical SAM superfamily CYB_0243 PF13353 4Fe-4S single cluster domain CYB_0244 PF00805 Pentapeptide repeats (8 copies) CYB_0245 PF01228 Glycine radical CYB_0245 PF02901 Pyruvate formate lyase CYB_0246 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CYB_0247 PF01385 CYB_0247 CYB_0247 PF07282 CYB_0247 CYB_0247 PF12323 CYB_0247 CYB_0248 PF00005 ABC transporter CYB_0248 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CYB_0249 PF00072 Response regulator receiver domain CYB_0249 PF00486 Transcriptional regulatory protein, C terminal CYB_0250 PF02274 Amidinotransferase CYB_0250 PF04455 LOR/SDH bifunctional enzyme conserved region CYB_0252 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase CYB_0253 PF00011 Hsp20/alpha crystallin family CYB_0258 PF01385 CYB_0258 CYB_0258 PF07282 CYB_0258 CYB_0260 PF00155 Aminotransferase class I and II CYB_0261 PF00588 SpoU rRNA Methylase family CYB_0262 PF00448 SRP54-type protein, GTPase domain CYB_0262 PF02881 SRP54-type protein, helical bundle domain CYB_0262 PF02978 Signal peptide binding domain CYB_0263 PF03055 Retinal pigment epithelial membrane protein CYB_0267 PF00528 Binding-protein-dependent transport system inner membrane component CYB_0268 PF00005 ABC transporter CYB_0268 PF09821 CYB_0268 CYB_0269 PF01661 Macro domain CYB_0270 PF00334 Nucleoside diphosphate kinase CYB_0271 PF04955 CYB_0271 CYB_0273 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CYB_0274 PF02872 5'-nucleotidase, C-terminal domain CYB_0276 PF05419 GUN4-like CYB_0277 PF09353 CYB_0277 CYB_0278 PF01964 ThiC family CYB_0279 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CYB_0280 PF00111 2Fe-2S iron-sulfur cluster binding domain CYB_0281 PF00421 Photosystem II protein CYB_0282 PF01405 Photosystem II reaction centre T protein CYB_0283 PF00072 Response regulator receiver domain CYB_0284 PF13507 CobB/CobQ-like glutamine amidotransferase domain CYB_0285 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase CYB_0286 PF12679 CYB_0286 CYB_0287 PF04029 2-phosphosulpholactate phosphatase CYB_0289 PF01118 Semialdehyde dehydrogenase, NAD binding domain CYB_0289 PF02774 Semialdehyde dehydrogenase, dimerisation domain CYB_0292 PF08245 Mur ligase middle domain CYB_0292 PF13450 NAD(P)-binding Rossmann-like domain CYB_0293 PF01098 CYB_0293 CYB_0298 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains CYB_0299 PF00676 Dehydrogenase E1 component CYB_0300 PF01148 Cytidylyltransferase family CYB_0301 PF00133 tRNA synthetases class I (I, L, M and V) CYB_0301 PF08264 Anticodon-binding domain of tRNA CYB_0301 PF10458 Valyl tRNA synthetase tRNA binding arm CYB_0302 PF00076 RNA recognition motif CYB_0304 PF02514 CYB_0304 CYB_0306 PF06739 CYB_0306 CYB_0308 PF07722 Peptidase C26 CYB_0309 PF02653 CYB_0309 CYB_0310 PF13231 CYB_0310 CYB_0311 PF10011 Predicted membrane protein (DUF2254) CYB_0312 PF00448 SRP54-type protein, GTPase domain CYB_0312 PF02881 SRP54-type protein, helical bundle domain CYB_0313 PF11209 CYB_0313 CYB_0315 PF01435 Peptidase family M48 CYB_0316 PF03775 Septum formation inhibitor MinC, C-terminal domain CYB_0317 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CYB_0318 PF03776 Septum formation topological specificity factor MinE CYB_0319 PF06094 AIG2-like family CYB_0320 PF00999 Sodium/hydrogen exchanger family CYB_0321 PF02660 CYB_0321 CYB_0322 PF00204 DNA gyrase B CYB_0322 PF00986 DNA gyrase B subunit, carboxyl terminus CYB_0322 PF01751 Toprim domain CYB_0322 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYB_0323 PF01782 RimM N-terminal domain CYB_0323 PF05239 PRC-barrel domain CYB_0324 PF01145 SPFH domain / Band 7 family CYB_0325 PF00890 FAD binding domain CYB_0325 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYB_0326 PF01522 Polysaccharide deacetylase CYB_0327 PF00330 Aconitase family (aconitate hydratase) CYB_0329 PF01385 CYB_0329 CYB_0329 PF07282 CYB_0329 CYB_0330 PF02625 XdhC and CoxI family CYB_0330 PF13478 XdhC Rossmann domain CYB_0331 PF00144 Beta-lactamase CYB_0332 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYB_0332 PF03466 LysR substrate binding domain CYB_0333 PF00591 Glycosyl transferase family, a/b domain CYB_0333 PF02885 Glycosyl transferase family, helical bundle domain CYB_0334 PF07498 Rho termination factor, N-terminal domain CYB_0334 PF16258 CYB_0334 CYB_0336 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CYB_0337 PF00892 EamA-like transporter family CYB_0338 PF00465 Iron-containing alcohol dehydrogenase CYB_0340 PF00155 Aminotransferase class I and II CYB_0343 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CYB_0345 PF02578 Multi-copper polyphenol oxidoreductase laccase CYB_0346 PF11317 CYB_0346 CYB_0347 PF00990 GGDEF domain CYB_0347 PF16697 CYB_0347 CYB_0348 PF01597 Glycine cleavage H-protein CYB_0349 PF00561 alpha/beta hydrolase fold CYB_0350 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CYB_0350 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CYB_0352 PF00072 Response regulator receiver domain CYB_0353 PF01385 CYB_0353 CYB_0353 PF07282 CYB_0353 CYB_0353 PF12323 CYB_0353 CYB_0357 PF01116 Fructose-bisphosphate aldolase class-II CYB_0359 PF01177 Asp/Glu/Hydantoin racemase CYB_0360 PF01520 N-acetylmuramoyl-L-alanine amidase CYB_0360 PF11741 AMIN domain CYB_0362 PF13847 Methyltransferase domain CYB_0364 PF01209 ubiE/COQ5 methyltransferase family CYB_0367 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CYB_0368 PF08847 CYB_0368 CYB_0371 PF00124 Photosynthetic reaction centre protein CYB_0372 PF03699 CYB_0372 CYB_0373 PF04459 CYB_0373 CYB_0374 PF09876 CYB_0374 CYB_0375 PF12804 MobA-like NTP transferase domain CYB_0378 PF01230 HIT domain CYB_0379 PF02570 Precorrin-8X methylmutase CYB_0381 PF00258 Flavodoxin CYB_0381 PF00753 Metallo-beta-lactamase superfamily CYB_0381 PF01613 Flavin reductase like domain CYB_0382 PF01926 50S ribosome-binding GTPase CYB_0382 PF13167 CYB_0382 CYB_0382 PF16360 CYB_0382 CYB_0385 PF04343 CYB_0385 CYB_0386 PF04343 CYB_0386 CYB_0388 PF02653 CYB_0388 CYB_0389 PF02653 CYB_0389 CYB_0390 PF00005 ABC transporter CYB_0391 PF02608 Basic membrane protein CYB_0393 PF07969 Amidohydrolase family CYB_0394 PF01812 5-formyltetrahydrofolate cyclo-ligase family CYB_0395 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CYB_0397 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CYB_0397 PF01890 Cobalamin synthesis G C-terminus CYB_0397 PF11760 Cobalamin synthesis G N-terminal CYB_0397 PF11761 CYB_0397 CYB_0398 PF00005 ABC transporter CYB_0398 PF00528 Binding-protein-dependent transport system inner membrane component CYB_0399 PF13531 Bacterial extracellular solute-binding protein CYB_0401 PF03459 TOBE domain CYB_0402 PF00037 4Fe-4S binding domain CYB_0402 PF13560 Helix-turn-helix domain CYB_0404 PF04023 FeoA domain CYB_0405 PF00111 2Fe-2S iron-sulfur cluster binding domain CYB_0406 PF03206 CYB_0406 CYB_0407 PF05082 Rop-like CYB_0408 PF03270 Protein of unknown function, DUF269 CYB_0409 PF02579 Dinitrogenase iron-molybdenum cofactor CYB_0410 PF00148 Nitrogenase component 1 type Oxidoreductase CYB_0411 PF00148 Nitrogenase component 1 type Oxidoreductase CYB_0412 PF06967 CYB_0412 CYB_0413 PF11165 CYB_0413 CYB_0414 PF00210 Ferritin-like domain CYB_0417 PF02579 Dinitrogenase iron-molybdenum cofactor CYB_0417 PF04055 Radical SAM superfamily CYB_0418 PF12838 4Fe-4S dicluster domain CYB_0419 PF00266 Aminotransferase class-V CYB_0420 PF01106 NifU-like domain CYB_0420 PF01592 NifU-like N terminal domain CYB_0420 PF04324 BFD-like [2Fe-2S] binding domain CYB_0421 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family CYB_0422 PF00148 Nitrogenase component 1 type Oxidoreductase CYB_0423 PF00148 Nitrogenase component 1 type Oxidoreductase CYB_0423 PF11844 Domain of unknown function (DUF3364) CYB_0424 PF00682 HMGL-like CYB_0426 PF04319 CYB_0426 CYB_0427 PF06988 NifT/FixU protein CYB_0428 PF07690 Major Facilitator Superfamily CYB_0430 PF04577 CYB_0430 CYB_0430 PF13176 Tetratricopeptide repeat CYB_0431 PF00427 Phycobilisome Linker polypeptide CYB_0431 PF00502 Phycobilisome protein CYB_0432 PF05491 Holliday junction DNA helicase ruvB C-terminus CYB_0432 PF05496 Holliday junction DNA helicase ruvB N-terminus CYB_0433 PF00124 Photosynthetic reaction centre protein CYB_0434 PF00814 Glycoprotease family CYB_0435 PF01132 Elongation factor P (EF-P) OB domain CYB_0435 PF08207 Elongation factor P (EF-P) KOW-like domain CYB_0435 PF09285 Elongation factor P, C-terminal CYB_0436 PF00364 Biotin-requiring enzyme CYB_0437 PF00149 Calcineurin-like phosphoesterase CYB_0438 PF01507 Phosphoadenosine phosphosulfate reductase family CYB_0439 PF03992 Antibiotic biosynthesis monooxygenase CYB_0441 PF00485 Phosphoribulokinase / Uridine kinase family CYB_0442 PF04012 CYB_0442 CYB_0443 PF00805 Pentapeptide repeats (8 copies) CYB_0444 PF00459 Inositol monophosphatase family CYB_0445 PF00977 Histidine biosynthesis protein CYB_0446 PF02374 Anion-transporting ATPase CYB_0447 PF13083 KH domain CYB_0448 PF00886 Ribosomal protein S16 CYB_0449 PF05099 Tellurite resistance protein TerB CYB_0450 PF02583 Metal-sensitive transcriptional repressor CYB_0451 PF00348 Polyprenyl synthetase CYB_0452 PF00717 Peptidase S24-like CYB_0454 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CYB_0455 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CYB_0456 PF11780 CYB_0456 CYB_0457 PF03099 Biotin/lipoate A/B protein ligase family CYB_0458 PF01551 Peptidase family M23 CYB_0460 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CYB_0461 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CYB_0462 PF01882 CYB_0462 CYB_0463 PF01734 Patatin-like phospholipase CYB_0464 PF00300 Histidine phosphatase superfamily (branch 1) CYB_0465 PF01513 ATP-NAD kinase CYB_0466 PF00069 Protein kinase domain CYB_0468 PF00515 Tetratricopeptide repeat CYB_0468 PF07719 Tetratricopeptide repeat CYB_0468 PF13432 Tetratricopeptide repeat CYB_0468 PF13844 Glycosyl transferase family 41 CYB_0469 PF13524 Glycosyl transferases group 1 CYB_0470 PF13524 Glycosyl transferases group 1 CYB_0472 PF01385 CYB_0472 CYB_0472 PF07282 CYB_0472 CYB_0473 PF13640 2OG-Fe(II) oxygenase superfamily CYB_0474 PF13704 CYB_0474 CYB_0475 PF07963 Prokaryotic N-terminal methylation motif CYB_0476 PF05050 Methyltransferase FkbM domain CYB_0476 PF13844 Glycosyl transferase family 41 CYB_0478 PF00156 Phosphoribosyl transferase domain CYB_0479 PF01063 Aminotransferase class IV CYB_0480 PF03413 Peptidase propeptide and YPEB domain CYB_0481 PF00571 CBS domain CYB_0481 PF01595 CYB_0481 CYB_0481 PF03471 Transporter associated domain CYB_0482 PF01276 Orn/Lys/Arg decarboxylase, major domain CYB_0482 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CYB_0483 PF11016 CYB_0483 CYB_0484 PF00263 CYB_0484 CYB_0484 PF03958 Bacterial type II/III secretion system short domain CYB_0484 PF11741 AMIN domain CYB_0486 PF05137 CYB_0486 CYB_0487 PF11104 Type IV pilus assembly protein PilM; CYB_0488 PF06745 KaiC CYB_0489 PF07689 KaiB domain CYB_0490 PF07688 KaiA domain CYB_0491 PF01156 Inosine-uridine preferring nucleoside hydrolase CYB_0492 PF01066 CDP-alcohol phosphatidyltransferase CYB_0493 PF02075 Crossover junction endodeoxyribonuclease RuvC CYB_0494 PF02190 ATP-dependent protease La (LON) domain CYB_0496 PF00756 Putative esterase CYB_0498 PF04339 CYB_0498 CYB_0500 PF01938 TRAM domain CYB_0500 PF05958 tRNA (Uracil-5-)-methyltransferase CYB_0503 PF00583 Acetyltransferase (GNAT) family CYB_0505 PF13343 Bacterial extracellular solute-binding protein CYB_0506 PF00504 Chlorophyll A-B binding protein CYB_0507 PF00072 Response regulator receiver domain CYB_0507 PF00512 His Kinase A (phospho-acceptor) domain CYB_0507 PF00989 PAS fold CYB_0507 PF01590 GAF domain CYB_0507 PF01627 Hpt domain CYB_0507 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYB_0507 PF05227 CHASE3 domain CYB_0507 PF08448 PAS fold CYB_0511 PF01702 Queuine tRNA-ribosyltransferase CYB_0515 PF13460 NADH(P)-binding CYB_0516 PF00171 Aldehyde dehydrogenase family CYB_0516 PF01619 Proline dehydrogenase CYB_0517 PF03783 Curli production assembly/transport component CsgG CYB_0518 PF01385 CYB_0518 CYB_0518 PF07282 CYB_0518 CYB_0518 PF12323 CYB_0518 CYB_0519 PF00696 Amino acid kinase family CYB_0519 PF01472 PUA domain CYB_0522 PF00069 Protein kinase domain CYB_0523 PF00578 AhpC/TSA family CYB_0524 PF00707 Translation initiation factor IF-3, C-terminal domain CYB_0524 PF05198 Translation initiation factor IF-3, N-terminal domain CYB_0526 PF00206 Lyase CYB_0526 PF10415 Fumarase C C-terminus CYB_0527 PF05685 Putative restriction endonuclease CYB_0528 PF13347 MFS/sugar transport protein CYB_0529 PF01797 Transposase IS200 like CYB_0530 PF01385 CYB_0530 CYB_0530 PF07282 CYB_0530 CYB_0530 PF12323 CYB_0530 CYB_0533 PF01040 UbiA prenyltransferase family CYB_0534 PF05721 Phytanoyl-CoA dioxygenase (PhyH) CYB_0535 PF00425 chorismate binding enzyme CYB_0535 PF04715 Anthranilate synthase component I, N terminal region CYB_0536 PF00293 NUDIX domain CYB_0538 PF01551 Peptidase family M23 CYB_0539 PF04240 CYB_0539 CYB_0540 PF01212 Beta-eliminating lyase CYB_0541 PF01252 CYB_0541 CYB_0545 PF00528 Binding-protein-dependent transport system inner membrane component CYB_0546 PF01330 RuvA N terminal domain CYB_0546 PF07499 RuvA, C-terminal domain CYB_0546 PF14520 Helix-hairpin-helix domain CYB_0547 PF01467 Cytidylyltransferase CYB_0548 PF01385 CYB_0548 CYB_0548 PF07282 CYB_0548 CYB_0549 PF12838 4Fe-4S dicluster domain CYB_0551 PF11998 CYB_0551 CYB_0556 PF04107 Glutamate-cysteine ligase family 2(GCS2) CYB_0557 PF09335 CYB_0557 CYB_0558 PF01187 Macrophage migration inhibitory factor (MIF) CYB_0559 PF01042 Endoribonuclease L-PSP CYB_0560 PF01809 CYB_0560 CYB_0561 PF07690 Major Facilitator Superfamily CYB_0562 PF08486 CYB_0562 CYB_0563 PF01867 CRISPR associated protein Cas1 CYB_0564 PF13245 Part of AAA domain CYB_0564 PF13361 UvrD-like helicase C-terminal domain CYB_0565 PF00378 Enoyl-CoA hydratase/isomerase family CYB_0566 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CYB_0566 PF02602 Uroporphyrinogen-III synthase HemD CYB_0568 PF00427 Phycobilisome Linker polypeptide CYB_0569 PF09084 NMT1/THI5 like CYB_0571 PF00111 2Fe-2S iron-sulfur cluster binding domain CYB_0572 PF02830 V4R domain CYB_0575 PF00502 Phycobilisome protein CYB_0576 PF02830 V4R domain CYB_0578 PF13180 PDZ domain CYB_0578 PF13365 Trypsin-like peptidase domain CYB_0579 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CYB_0580 PF00005 ABC transporter CYB_0581 PF00528 Binding-protein-dependent transport system inner membrane component CYB_0582 PF04542 Sigma-70 region 2 CYB_0582 PF08281 Sigma-70, region 4 CYB_0583 PF10099 CYB_0583 CYB_0584 PF04294 CYB_0584 CYB_0585 PF09651 CRISPR-associated protein (Cas_APE2256) CYB_0587 PF03787 RAMP superfamily CYB_0589 PF03787 RAMP superfamily CYB_0590 PF03787 RAMP superfamily CYB_0593 PF03787 RAMP superfamily CYB_0594 PF03787 RAMP superfamily CYB_0596 PF10040 Uncharacterized conserved protein (DUF2276) CYB_0597 PF13280 CYB_0597 CYB_0598 PF01385 CYB_0598 CYB_0598 PF07282 CYB_0598 CYB_0599 PF09620 CYB_0599 CYB_0600 PF03747 ADP-ribosylglycohydrolase CYB_0601 PF00005 ABC transporter CYB_0602 PF00005 ABC transporter CYB_0602 PF13379 NMT1-like family CYB_0603 PF00528 Binding-protein-dependent transport system inner membrane component CYB_0604 PF13379 NMT1-like family CYB_0605 PF14249 CYB_0605 CYB_0607 PF00004 ATPase family associated with various cellular activities (AAA) CYB_0607 PF02151 UvrB/uvrC motif CYB_0607 PF02861 Clp amino terminal domain CYB_0607 PF07724 AAA domain (Cdc48 subfamily) CYB_0607 PF10431 C-terminal, D2-small domain, of ClpB protein CYB_0608 PF00574 Clp protease CYB_0610 PF00574 Clp protease CYB_0612 PF06206 CpeT/CpcT family (DUF1001) CYB_0613 PF00390 Malic enzyme, N-terminal domain CYB_0613 PF03949 Malic enzyme, NAD binding domain CYB_0614 PF09651 CRISPR-associated protein (Cas_APE2256) CYB_0617 PF00656 Caspase domain CYB_0618 PF07758 CYB_0618 CYB_0620 PF01385 CYB_0620 CYB_0620 PF07282 CYB_0620 CYB_0623 PF03109 CYB_0623 CYB_0624 PF02153 Prephenate dehydrogenase CYB_0625 PF02683 CYB_0625 CYB_0626 PF05140 CYB_0626 CYB_0627 PF00502 Phycobilisome protein CYB_0628 PF02941 Ferredoxin thioredoxin reductase variable alpha chain CYB_0630 PF01385 CYB_0630 CYB_0630 PF07282 CYB_0630 CYB_0631 PF00004 ATPase family associated with various cellular activities (AAA) CYB_0631 PF01434 Peptidase family M41 CYB_0631 PF06480 FtsH Extracellular CYB_0632 PF00343 Carbohydrate phosphorylase CYB_0632 PF11897 CYB_0632 CYB_0633 PF08486 CYB_0633 CYB_0635 PF14437 CYB_0635 CYB_0636 PF13180 PDZ domain CYB_0636 PF13365 Trypsin-like peptidase domain CYB_0637 PF00069 Protein kinase domain CYB_0637 PF05419 GUN4-like CYB_0641 PF13586 CYB_0641 CYB_0642 PF01926 50S ribosome-binding GTPase CYB_0643 PF04055 Radical SAM superfamily CYB_0643 PF13186 Iron-sulfur cluster-binding domain CYB_0644 PF10664 CYB_0644 CYB_0645 PF11210 CYB_0645 CYB_0646 PF00534 Glycosyl transferases group 1 CYB_0646 PF08323 Starch synthase catalytic domain CYB_0647 PF03065 Glycosyl hydrolase family 57 CYB_0647 PF09210 Domain of unknown function (DUF1957) CYB_0648 PF00205 Thiamine pyrophosphate enzyme, central domain CYB_0648 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CYB_0648 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CYB_0649 PF02366 CYB_0649 CYB_0649 PF16192 CYB_0649 CYB_0650 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CYB_0651 PF01841 Transglutaminase-like superfamily CYB_0652 PF01925 CYB_0652 CYB_0653 PF00800 Prephenate dehydratase CYB_0653 PF01842 ACT domain CYB_0654 PF10719 CYB_0654 CYB_0655 PF00842 Alanine racemase, C-terminal domain CYB_0655 PF01168 Alanine racemase, N-terminal domain CYB_0656 PF01343 Peptidase family S49 CYB_0660 PF01040 UbiA prenyltransferase family CYB_0661 PF02628 CYB_0661 CYB_0662 PF00140 Sigma-70 factor, region 1 CYB_0662 PF04539 Sigma-70 region 3 CYB_0662 PF04542 Sigma-70 region 2 CYB_0662 PF04545 Sigma-70, region 4 CYB_0663 PF12844 Helix-turn-helix domain CYB_0667 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CYB_0668 PF00933 Glycosyl hydrolase family 3 N terminal domain CYB_0669 PF00270 DEAD/DEAH box helicase CYB_0669 PF00271 Helicase conserved C-terminal domain CYB_0671 PF00475 Imidazoleglycerol-phosphate dehydratase CYB_0673 PF06298 Photosystem II protein Y (PsbY) CYB_0674 PF01593 Flavin containing amine oxidoreductase CYB_0674 PF13450 NAD(P)-binding Rossmann-like domain CYB_0675 PF01242 6-pyruvoyl tetrahydropterin synthase CYB_0676 PF09376 NurA domain CYB_0677 PF00128 Alpha amylase, catalytic domain CYB_0677 PF01636 Phosphotransferase enzyme family CYB_0677 PF16657 CYB_0677 CYB_0678 PF02481 DNA recombination-mediator protein A CYB_0678 PF12826 Helix-hairpin-helix motif CYB_0679 PF02586 Uncharacterised ACR, COG2135 CYB_0681 PF00474 Sodium:solute symporter family CYB_0682 PF02517 CAAX protease self-immunity CYB_0683 PF02617 ATP-dependent Clp protease adaptor protein ClpS CYB_0684 PF09423 PhoD-like phosphatase CYB_0684 PF16655 CYB_0684 CYB_0686 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CYB_0686 PF13641 Glycosyltransferase like family 2 CYB_0687 PF03170 Bacterial cellulose synthase subunit CYB_0688 PF01050 Mannose-6-phosphate isomerase CYB_0692 PF00582 Universal stress protein family CYB_0694 PF03129 Anticodon binding domain CYB_0694 PF13393 Histidyl-tRNA synthetase CYB_0695 PF04452 RNA methyltransferase CYB_0696 PF06325 Ribosomal protein L11 methyltransferase (PrmA) CYB_0698 PF05996 Ferredoxin-dependent bilin reductase CYB_0701 PF02548 Ketopantoate hydroxymethyltransferase CYB_0703 PF00534 Glycosyl transferases group 1 CYB_0703 PF13439 Glycosyltransferase Family 4 CYB_0705 PF03703 CYB_0705 CYB_0707 PF00520 Ion transport protein CYB_0708 PF02637 GatB domain CYB_0708 PF02934 GatB/GatE catalytic domain CYB_0709 PF02545 Maf-like protein CYB_0710 PF00708 Acylphosphatase CYB_0712 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYB_0713 PF11209 CYB_0713 CYB_0714 PF01078 Magnesium chelatase, subunit ChlI CYB_0714 PF13519 von Willebrand factor type A domain CYB_0715 PF00171 Aldehyde dehydrogenase family CYB_0717 PF16576 CYB_0717 CYB_0718 PF00873 AcrB/AcrD/AcrF family CYB_0719 PF11165 CYB_0719 CYB_0722 PF11623 Protein of unknown function (DUF3252) CYB_0723 PF00498 FHA domain CYB_0724 PF00999 Sodium/hydrogen exchanger family CYB_0725 PF01195 Peptidyl-tRNA hydrolase CYB_0726 PF01590 GAF domain CYB_0726 PF13487 HD domain CYB_0727 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CYB_0728 PF14271 CYB_0728 CYB_0729 PF13378 Enolase C-terminal domain-like CYB_0731 PF00675 Insulinase (Peptidase family M16) CYB_0731 PF05193 Peptidase M16 inactive domain CYB_0732 PF00675 Insulinase (Peptidase family M16) CYB_0732 PF05193 Peptidase M16 inactive domain CYB_0733 PF02163 Peptidase family M50 CYB_0734 PF14528 LAGLIDADG-like domain CYB_0735 PF01409 tRNA synthetases class II core domain (F) CYB_0735 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CYB_0736 PF12058 Protein of unknown function (DUF3539) CYB_0738 PF00005 ABC transporter CYB_0739 PF07521 RNA-metabolising metallo-beta-lactamase CYB_0739 PF12706 Beta-lactamase superfamily domain CYB_0741 PF01016 Ribosomal L27 protein CYB_0742 PF00829 Ribosomal prokaryotic L21 protein CYB_0744 PF13591 MerR HTH family regulatory protein CYB_0745 PF00226 DnaJ domain CYB_0745 PF01556 DnaJ C terminal domain CYB_0746 PF06150 ChaB CYB_0747 PF04389 Peptidase family M28 CYB_0748 PF13419 Haloacid dehalogenase-like hydrolase CYB_0749 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CYB_0749 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYB_0750 PF13847 Methyltransferase domain CYB_0752 PF00730 HhH-GPD superfamily base excision DNA repair protein CYB_0752 PF14815 NUDIX domain CYB_0755 PF00035 Double-stranded RNA binding motif CYB_0755 PF14622 Ribonuclease-III-like CYB_0757 PF01594 CYB_0757 CYB_0759 PF00691 OmpA family CYB_0763 PF14250 CYB_0763 CYB_0765 PF00122 E1-E2 ATPase CYB_0765 PF00689 Cation transporting ATPase, C-terminus CYB_0765 PF00690 Cation transporter/ATPase, N-terminus CYB_0765 PF00702 haloacid dehalogenase-like hydrolase CYB_0765 PF13246 Putative hydrolase of sodium-potassium ATPase alpha subunit CYB_0766 PF00583 Acetyltransferase (GNAT) family CYB_0769 PF01883 Domain of unknown function DUF59 CYB_0769 PF10609 ParA/MinD ATPase like CYB_0770 PF01103 Surface antigen CYB_0770 PF07244 Surface antigen variable number repeat CYB_0770 PF08479 POTRA domain, ShlB-type CYB_0772 PF13458 Periplasmic binding protein CYB_0774 PF00005 ABC transporter CYB_0774 PF12399 Branched-chain amino acid ATP-binding cassette transporter CYB_0775 PF00005 ABC transporter CYB_0776 PF02463 RecF/RecN/SMC N terminal domain CYB_0777 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family CYB_0778 PF04107 Glutamate-cysteine ligase family 2(GCS2) CYB_0779 PF01523 Putative modulator of DNA gyrase CYB_0780 PF01494 FAD binding domain CYB_0782 PF09493 CYB_0782 CYB_0783 PF02542 YgbB family CYB_0784 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CYB_0785 PF06202 Amylo-alpha-1,6-glucosidase CYB_0785 PF14742 CYB_0785 CYB_0786 PF00534 Glycosyl transferases group 1 CYB_0786 PF13439 Glycosyltransferase Family 4 CYB_0788 PF13847 Methyltransferase domain CYB_0790 PF00892 EamA-like transporter family CYB_0793 PF01457 Leishmanolysin CYB_0795 PF03171 2OG-Fe(II) oxygenase superfamily CYB_0795 PF14226 non-haem dioxygenase in morphine synthesis N-terminal CYB_0796 PF00857 Isochorismatase family CYB_0797 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase CYB_0797 PF09364 XFP N-terminal domain CYB_0798 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) CYB_0798 PF13614 AAA domain CYB_0800 PF01724 Domain of unknown function DUF29 CYB_0801 PF04471 Restriction endonuclease CYB_0801 PF14338 CYB_0801 CYB_0803 PF00875 DNA photolyase CYB_0803 PF03441 FAD binding domain of DNA photolyase CYB_0804 PF00216 Bacterial DNA-binding protein CYB_0805 PF13581 Histidine kinase-like ATPase domain CYB_0806 PF11832 CYB_0806 CYB_0807 PF00271 Helicase conserved C-terminal domain CYB_0807 PF02151 UvrB/uvrC motif CYB_0807 PF04851 Type III restriction enzyme, res subunit CYB_0807 PF12344 Ultra-violet resistance protein B CYB_0808 PF00924 Mechanosensitive ion channel CYB_0809 PF05258 CYB_0809 CYB_0810 PF03040 CYB_0810 CYB_0811 PF00535 Glycosyl transferase family 2 CYB_0811 PF13489 Methyltransferase domain CYB_0812 PF06596 Photosystem II reaction centre X protein (PsbX) CYB_0813 PF02943 Ferredoxin thioredoxin reductase catalytic beta chain CYB_0814 PF01385 CYB_0814 CYB_0814 PF07282 CYB_0814 CYB_0814 PF12323 CYB_0814 CYB_0815 PF00111 2Fe-2S iron-sulfur cluster binding domain CYB_0816 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CYB_0816 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CYB_0818 PF00082 Subtilase family CYB_0819 PF01618 CYB_0819 CYB_0820 PF02472 Biopolymer transport protein ExbD/TolR CYB_0821 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CYB_0821 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CYB_0822 PF03572 Peptidase family S41 CYB_0822 PF13180 PDZ domain CYB_0823 PF00171 Aldehyde dehydrogenase family CYB_0824 PF00076 RNA recognition motif CYB_0825 PF13462 Thioredoxin CYB_0828 PF01368 DHH family CYB_0828 PF02272 DHHA1 domain CYB_0829 PF00149 Calcineurin-like phosphoesterase CYB_0830 PF01725 Ham1 family CYB_0832 PF02223 Thymidylate kinase CYB_0833 PF05235 CHAD domain CYB_0834 PF09827 CRISPR associated protein Cas2 CYB_0835 PF01867 CRISPR associated protein Cas1 CYB_0837 PF03787 RAMP superfamily CYB_0838 PF05685 Putative restriction endonuclease CYB_0840 PF03787 RAMP superfamily CYB_0841 PF09700 CRISPR-associated protein (Cas_Cmr3) CYB_0842 PF12469 CRISPR-associated protein CYB_0843 PF09455 CRISPR-associated (Cas) DxTHG family CYB_0845 PF05685 Putative restriction endonuclease CYB_0846 PF02663 FmdE, Molybdenum formylmethanofuran dehydrogenase operon CYB_0847 PF00575 S1 RNA binding domain CYB_0848 PF02082 Transcriptional regulator CYB_0849 PF07726 ATPase family associated with various cellular activities (AAA) CYB_0850 PF00528 Binding-protein-dependent transport system inner membrane component CYB_0851 PF01370 NAD dependent epimerase/dehydratase family CYB_0852 PF02492 CobW/HypB/UreG, nucleotide-binding domain CYB_0852 PF07683 Cobalamin synthesis protein cobW C-terminal domain CYB_0853 PF00421 Photosystem II protein CYB_0854 PF00124 Photosynthetic reaction centre protein CYB_0855 PF08041 PetM family of cytochrome b6f complex subunit 7 CYB_0856 PF02558 Ketopantoate reductase PanE/ApbA CYB_0856 PF08546 Ketopantoate reductase PanE/ApbA C terminal CYB_0857 PF00106 short chain dehydrogenase CYB_0858 PF00512 His Kinase A (phospho-acceptor) domain CYB_0858 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYB_0859 PF00196 Bacterial regulatory proteins, luxR family CYB_0861 PF00487 CYB_0861 CYB_0862 PF00440 Bacterial regulatory proteins, tetR family CYB_0863 PF03417 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase CYB_0864 PF00581 Rhodanese-like domain CYB_0869 PF12838 4Fe-4S dicluster domain CYB_0870 PF00146 NADH dehydrogenase CYB_0872 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CYB_0873 PF11691 CYB_0873 CYB_0874 PF02627 Carboxymuconolactone decarboxylase family CYB_0877 PF02492 CobW/HypB/UreG, nucleotide-binding domain CYB_0878 PF01774 UreD urease accessory protein CYB_0881 PF00561 alpha/beta hydrolase fold CYB_0882 PF10726 CYB_0882 CYB_0883 PF00325 Bacterial regulatory proteins, crp family CYB_0884 PF01975 Survival protein SurE CYB_0885 PF00270 DEAD/DEAH box helicase CYB_0885 PF00271 Helicase conserved C-terminal domain CYB_0888 PF01878 EVE domain CYB_0889 PF00117 Glutamine amidotransferase class-I CYB_0890 PF04055 Radical SAM superfamily CYB_0890 PF06969 HemN C-terminal domain CYB_0891 PF04461 Protein of unknown function (DUF520) CYB_0892 PF00106 short chain dehydrogenase CYB_0893 PF01943 CYB_0893 CYB_0893 PF14667 Polysaccharide biosynthesis C-terminal domain CYB_0894 PF00498 FHA domain CYB_0895 PF00905 Penicillin binding protein transpeptidase domain CYB_0895 PF03717 Penicillin-binding Protein dimerisation domain CYB_0896 PF00216 Bacterial DNA-binding protein CYB_0897 PF00155 Aminotransferase class I and II CYB_0900 PF13638 PIN domain CYB_0901 PF00551 Formyl transferase CYB_0904 PF09626 Dihaem cytochrome c CYB_0905 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CYB_0906 PF01451 Low molecular weight phosphotyrosine protein phosphatase CYB_0907 PF01909 Nucleotidyltransferase domain CYB_0908 PF02514 CYB_0908 CYB_0908 PF11965 CYB_0908 CYB_0909 PF01478 Type IV leader peptidase family CYB_0909 PF06750 CYB_0909 CYB_0911 PF02875 Mur ligase family, glutamate ligase domain CYB_0911 PF08245 Mur ligase middle domain CYB_0911 PF08443 RimK-like ATP-grasp domain CYB_0912 PF03772 CYB_0912 CYB_0912 PF13567 CYB_0912 CYB_0914 PF01145 SPFH domain / Band 7 family CYB_0915 PF01145 SPFH domain / Band 7 family CYB_0917 PF00072 Response regulator receiver domain CYB_0917 PF13487 HD domain CYB_0918 PF00164 Ribosomal protein S12/S23 CYB_0919 PF00177 Ribosomal protein S7p/S5e CYB_0920 PF00009 Elongation factor Tu GTP binding domain CYB_0920 PF00679 Elongation factor G C-terminus CYB_0920 PF03144 Elongation factor Tu domain 2 CYB_0920 PF03764 Elongation factor G, domain IV CYB_0920 PF14492 Elongation Factor G, domain II CYB_0921 PF00009 Elongation factor Tu GTP binding domain CYB_0921 PF03143 Elongation factor Tu C-terminal domain CYB_0921 PF03144 Elongation factor Tu domain 2 CYB_0922 PF00338 Ribosomal protein S10p/S20e CYB_0923 PF02219 Methylenetetrahydrofolate reductase CYB_0924 PF01113 Dihydrodipicolinate reductase, N-terminus CYB_0924 PF05173 Dihydrodipicolinate reductase, C-terminus CYB_0926 PF11209 CYB_0926 CYB_0927 PF01266 FAD dependent oxidoreductase CYB_0928 PF12804 MobA-like NTP transferase domain CYB_0929 PF00902 Sec-independent protein translocase protein (TatC) CYB_0930 PF00528 Binding-protein-dependent transport system inner membrane component CYB_0931 PF00528 Binding-protein-dependent transport system inner membrane component CYB_0932 PF00497 Bacterial extracellular solute-binding proteins, family 3 CYB_0933 PF00005 ABC transporter CYB_0934 PF13649 Methyltransferase domain CYB_0936 PF13458 Periplasmic binding protein CYB_0937 PF00290 Tryptophan synthase alpha chain CYB_0939 PF00502 Phycobilisome protein CYB_0940 PF00502 Phycobilisome protein CYB_0941 PF01383 CpcD/allophycocyanin linker domain CYB_0942 PF03130 PBS lyase HEAT-like repeat CYB_0942 PF13646 HEAT repeats CYB_0943 PF03130 PBS lyase HEAT-like repeat CYB_0943 PF13646 HEAT repeats CYB_0944 PF00427 Phycobilisome Linker polypeptide CYB_0946 PF03109 CYB_0946 CYB_0947 PF13672 Protein phosphatase 2C CYB_0948 PF00850 Histone deacetylase domain CYB_0949 PF00069 Protein kinase domain CYB_0950 PF00498 FHA domain CYB_0950 PF00905 Penicillin binding protein transpeptidase domain CYB_0950 PF00912 Transglycosylase CYB_0952 PF07690 Major Facilitator Superfamily CYB_0954 PF14279 CYB_0954 CYB_0955 PF03065 Glycosyl hydrolase family 57 CYB_0956 PF00561 alpha/beta hydrolase fold CYB_0958 PF13180 PDZ domain CYB_0960 PF00085 Thioredoxin CYB_0961 PF02538 CYB_0961 CYB_0962 PF07298 CYB_0962 CYB_0963 PF13326 Photosystem II Pbs27 CYB_0964 PF04945 YHS domain CYB_0965 PF00512 His Kinase A (phospho-acceptor) domain CYB_0966 PF05175 Methyltransferase small domain CYB_0967 PF04278 Tic22-like family CYB_0970 PF01136 CYB_0970 CYB_0970 PF12392 CYB_0970 CYB_0971 PF10369 Small subunit of acetolactate synthase CYB_0971 PF13710 ACT domain CYB_0973 PF11318 CYB_0973 CYB_0974 PF02685 Glucokinase CYB_0976 PF08241 Methyltransferase domain CYB_0977 PF01935 Domain of unknown function DUF87 CYB_0977 PF09378 HAS barrel domain CYB_0978 PF01494 FAD binding domain CYB_0979 PF01385 CYB_0979 CYB_0979 PF07282 CYB_0979 CYB_0980 PF13205 Bacterial Ig-like domain CYB_0982 PF14250 CYB_0982 CYB_0983 PF02441 Flavoprotein CYB_0983 PF04127 DNA / pantothenate metabolism flavoprotein CYB_0984 PF01343 Peptidase family S49 CYB_0985 PF00106 short chain dehydrogenase CYB_0986 PF00398 Ribosomal RNA adenine dimethylase CYB_0987 PF00512 His Kinase A (phospho-acceptor) domain CYB_0987 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYB_0989 PF01106 NifU-like domain CYB_0990 PF02163 Peptidase family M50 CYB_0991 PF00633 Helix-hairpin-helix motif CYB_0991 PF00730 HhH-GPD superfamily base excision DNA repair protein CYB_0991 PF10576 Iron-sulfur binding domain of endonuclease III CYB_0992 PF03668 CYB_0992 CYB_0993 PF01933 Uncharacterised protein family UPF0052 CYB_0994 PF13231 CYB_0994 CYB_0996 PF00905 Penicillin binding protein transpeptidase domain CYB_0996 PF03717 Penicillin-binding Protein dimerisation domain CYB_0997 PF00535 Glycosyl transferase family 2 CYB_0997 PF04138 CYB_0997 CYB_0998 PF01966 HD domain CYB_0998 PF07697 CYB_0998 CYB_0998 PF07698 CYB_0998 CYB_0999 PF00127 Copper binding proteins, plastocyanin/azurin family CYB_1000 PF01648 4'-phosphopantetheinyl transferase superfamily CYB_1001 PF03816 Cell envelope-related transcriptional attenuator domain CYB_1001 PF13399 LytR cell envelope-related transcriptional attenuator CYB_1002 PF00885 6,7-dimethyl-8-ribityllumazine synthase CYB_1003 PF00183 Hsp90 protein CYB_1003 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYB_1005 PF00120 Glutamine synthetase, catalytic domain CYB_1006 PF08501 Shikimate dehydrogenase substrate binding domain CYB_1008 PF00072 Response regulator receiver domain CYB_1008 PF00990 GGDEF domain CYB_1009 PF04402 Protein of unknown function (DUF541) CYB_1011 PF14357 CYB_1011 CYB_1012 PF00202 Aminotransferase class-III CYB_1013 PF00148 Nitrogenase component 1 type Oxidoreductase CYB_1015 PF00106 short chain dehydrogenase CYB_1016 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family CYB_1017 PF07508 Recombinase CYB_1018 PF13580 SIS domain CYB_1020 PF00300 Histidine phosphatase superfamily (branch 1) CYB_1022 PF00133 tRNA synthetases class I (I, L, M and V) CYB_1022 PF06827 Zinc finger found in FPG and IleRS CYB_1022 PF08264 Anticodon-binding domain of tRNA CYB_1023 PF01385 CYB_1023 CYB_1023 PF07282 CYB_1023 CYB_1025 PF00581 Rhodanese-like domain CYB_1026 PF00557 Metallopeptidase family M24 CYB_1026 PF01321 Creatinase/Prolidase N-terminal domain CYB_1026 PF16188 CYB_1026 CYB_1026 PF16189 CYB_1026 CYB_1027 PF04055 Radical SAM superfamily CYB_1027 PF13394 4Fe-4S single cluster domain CYB_1028 PF06206 CpeT/CpcT family (DUF1001) CYB_1029 PF03631 CYB_1029 CYB_1030 PF01300 Telomere recombination CYB_1030 PF03481 Putative GTP-binding controlling metal-binding CYB_1031 PF00731 AIR carboxylase CYB_1033 PF11780 CYB_1033 CYB_1034 PF10923 CYB_1034 CYB_1038 PF06089 CYB_1038 CYB_1039 PF01903 CbiX CYB_1040 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CYB_1041 PF06182 CYB_1041 CYB_1042 PF01385 CYB_1042 CYB_1042 PF07282 CYB_1042 CYB_1043 PF02195 ParB-like nuclease domain CYB_1044 PF00072 Response regulator receiver domain CYB_1044 PF00196 Bacterial regulatory proteins, luxR family CYB_1047 PF14108 CYB_1047 CYB_1048 PF02632 BioY family CYB_1049 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CYB_1049 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CYB_1050 PF00805 Pentapeptide repeats (8 copies) CYB_1050 PF13599 Pentapeptide repeats (9 copies) CYB_1051 PF00830 Ribosomal L28 family CYB_1053 PF01385 CYB_1053 CYB_1053 PF07282 CYB_1053 CYB_1054 PF13202 EF hand CYB_1054 PF13620 Carboxypeptidase regulatory-like domain CYB_1055 PF01936 NYN domain CYB_1056 PF13328 HD domain CYB_1057 PF00578 AhpC/TSA family CYB_1058 PF02557 D-alanyl-D-alanine carboxypeptidase CYB_1060 PF01593 Flavin containing amine oxidoreductase CYB_1061 PF05685 Putative restriction endonuclease CYB_1062 PF05685 Putative restriction endonuclease CYB_1063 PF07969 Amidohydrolase family CYB_1064 PF02325 CYB_1064 CYB_1066 PF03109 CYB_1066 CYB_1067 PF00483 Nucleotidyl transferase CYB_1068 PF13614 AAA domain CYB_1070 PF01747 ATP-sulfurylase CYB_1070 PF14306 PUA-like domain CYB_1073 PF01479 S4 domain CYB_1073 PF01728 FtsJ-like methyltransferase CYB_1074 PF00005 ABC transporter CYB_1075 PF00528 Binding-protein-dependent transport system inner membrane component CYB_1076 PF00528 Binding-protein-dependent transport system inner membrane component CYB_1077 PF12849 PBP superfamily domain CYB_1080 PF01281 Ribosomal protein L9, N-terminal domain CYB_1080 PF03948 Ribosomal protein L9, C-terminal domain CYB_1081 PF00772 DnaB-like helicase N terminal domain CYB_1081 PF03796 DnaB-like helicase C terminal domain CYB_1082 PF00582 Universal stress protein family CYB_1083 PF00731 AIR carboxylase CYB_1084 PF03741 CYB_1084 CYB_1086 PF00005 ABC transporter CYB_1087 PF02470 CYB_1087 CYB_1088 PF00376 MerR family regulatory protein CYB_1088 PF09278 MerR, DNA binding CYB_1089 PF01380 SIS domain CYB_1089 PF13522 Glutamine amidotransferase domain CYB_1090 PF07282 CYB_1090 CYB_1091 PF12323 CYB_1091 CYB_1092 PF13340 CYB_1092 CYB_1093 PF13586 CYB_1093 CYB_1094 PF00163 Ribosomal protein S4/S9 N-terminal domain CYB_1094 PF01479 S4 domain CYB_1095 PF16363 CYB_1095 CYB_1096 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CYB_1099 PF13177 DNA polymerase III, delta subunit CYB_1100 PF13393 Histidyl-tRNA synthetase CYB_1106 PF01368 DHH family CYB_1106 PF02272 DHHA1 domain CYB_1107 PF13476 AAA domain CYB_1107 PF13558 Putative exonuclease SbcCD, C subunit CYB_1108 PF09579 CYB_1108 CYB_1109 PF11189 CYB_1109 CYB_1110 PF10792 CYB_1110 CYB_1111 PF02514 CYB_1111 CYB_1112 PF00923 Transaldolase CYB_1112 PF13202 EF hand CYB_1113 PF00849 RNA pseudouridylate synthase CYB_1113 PF01479 S4 domain CYB_1115 PF00391 PEP-utilising enzyme, mobile domain CYB_1115 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CYB_1115 PF02896 PEP-utilising enzyme, TIM barrel domain CYB_1116 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CYB_1116 PF00364 Biotin-requiring enzyme CYB_1116 PF02817 e3 binding domain CYB_1117 PF04055 Radical SAM superfamily CYB_1119 PF00456 Transketolase, thiamine diphosphate binding domain CYB_1119 PF02779 Transketolase, pyrimidine binding domain CYB_1119 PF02780 Transketolase, C-terminal domain CYB_1126 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CYB_1126 PF03129 Anticodon binding domain CYB_1126 PF04073 Aminoacyl-tRNA editing domain CYB_1127 PF00009 Elongation factor Tu GTP binding domain CYB_1127 PF04760 Translation initiation factor IF-2, N-terminal region CYB_1127 PF11987 Translation-initiation factor 2 CYB_1129 PF04296 Protein of unknown function (DUF448) CYB_1130 PF00072 Response regulator receiver domain CYB_1130 PF13487 HD domain CYB_1133 PF01145 SPFH domain / Band 7 family CYB_1135 PF02374 Anion-transporting ATPase CYB_1136 PF05757 Oxygen evolving enhancer protein 3 (PsbQ) CYB_1137 PF06485 CYB_1137 CYB_1138 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CYB_1139 PF13103 TonB C terminal CYB_1141 PF01571 Aminomethyltransferase folate-binding domain CYB_1141 PF08669 Glycine cleavage T-protein C-terminal barrel domain CYB_1142 PF00140 Sigma-70 factor, region 1 CYB_1142 PF04539 Sigma-70 region 3 CYB_1142 PF04542 Sigma-70 region 2 CYB_1142 PF04545 Sigma-70, region 4 CYB_1143 PF06868 CYB_1143 CYB_1144 PF00805 Pentapeptide repeats (8 copies) CYB_1145 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase CYB_1145 PF09363 XFP C-terminal domain CYB_1145 PF09364 XFP N-terminal domain CYB_1146 PF00953 Glycosyl transferase family 4 CYB_1146 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CYB_1147 PF03065 Glycosyl hydrolase family 57 CYB_1147 PF12055 CYB_1147 CYB_1149 PF12697 Alpha/beta hydrolase family CYB_1151 PF01385 CYB_1151 CYB_1151 PF07282 CYB_1151 CYB_1152 PF03092 CYB_1152 CYB_1154 PF02616 ScpA/B protein CYB_1158 PF00884 Sulfatase CYB_1159 PF01594 CYB_1159 CYB_1160 PF13561 Enoyl-(Acyl carrier protein) reductase CYB_1161 PF00152 tRNA synthetases class II (D, K and N) CYB_1161 PF01336 OB-fold nucleic acid binding domain CYB_1161 PF02938 GAD domain CYB_1162 PF01297 Periplasmic solute binding protein family CYB_1163 PF00005 ABC transporter CYB_1164 PF00950 CYB_1164 CYB_1165 PF00076 RNA recognition motif CYB_1166 PF02527 rRNA small subunit methyltransferase G CYB_1168 PF00117 Glutamine amidotransferase class-I CYB_1168 PF00958 GMP synthase C terminal domain CYB_1168 PF02540 NAD synthase CYB_1171 PF02492 CobW/HypB/UreG, nucleotide-binding domain CYB_1171 PF07683 Cobalamin synthesis protein cobW C-terminal domain CYB_1172 PF14233 CYB_1172 CYB_1173 PF11237 CYB_1173 CYB_1174 PF00498 FHA domain CYB_1175 PF13489 Methyltransferase domain CYB_1176 PF06182 CYB_1176 CYB_1177 PF14339 CYB_1177 CYB_1178 PF04542 Sigma-70 region 2 CYB_1178 PF04545 Sigma-70, region 4 CYB_1179 PF10099 CYB_1179 CYB_1180 PF10999 CYB_1180 CYB_1181 PF00795 Carbon-nitrogen hydrolase CYB_1182 PF05768 Glutaredoxin-like domain (DUF836) CYB_1183 PF01336 OB-fold nucleic acid binding domain CYB_1183 PF02811 PHP domain CYB_1183 PF07733 Bacterial DNA polymerase III alpha subunit CYB_1183 PF14579 Helix-hairpin-helix motif CYB_1184 PF00586 AIR synthase related protein, N-terminal domain CYB_1184 PF02769 AIR synthase related protein, C-terminal domain CYB_1186 PF00528 Binding-protein-dependent transport system inner membrane component CYB_1186 PF12911 CYB_1186 CYB_1187 PF13181 Tetratricopeptide repeat CYB_1190 PF13646 HEAT repeats CYB_1191 PF03054 tRNA methyl transferase CYB_1192 PF10110 CYB_1192 CYB_1193 PF01593 Flavin containing amine oxidoreductase CYB_1194 PF00400 WD domain, G-beta repeat CYB_1195 PF01385 CYB_1195 CYB_1195 PF07282 CYB_1195 CYB_1197 PF01841 Transglutaminase-like superfamily CYB_1197 PF11992 CYB_1197 CYB_1198 PF00245 Alkaline phosphatase CYB_1200 PF01047 MarR family CYB_1201 PF01385 CYB_1201 CYB_1201 PF07282 CYB_1201 CYB_1202 PF02653 CYB_1202 CYB_1204 PF05154 CYB_1204 CYB_1205 PF01061 CYB_1205 CYB_1206 PF00005 ABC transporter CYB_1207 PF00270 DEAD/DEAH box helicase CYB_1207 PF00271 Helicase conserved C-terminal domain CYB_1207 PF02559 CarD-like/TRCF domain CYB_1207 PF03461 TRCF domain CYB_1208 PF01654 CYB_1208 CYB_1209 PF02322 CYB_1209 CYB_1210 PF07282 CYB_1210 CYB_1211 PF05552 Conserved TM helix CYB_1212 PF00583 Acetyltransferase (GNAT) family CYB_1214 PF02222 ATP-grasp domain CYB_1217 PF01746 tRNA (Guanine-1)-methyltransferase CYB_1219 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CYB_1220 PF00467 KOW motif CYB_1220 PF02357 Transcription termination factor nusG CYB_1221 PF00298 Ribosomal protein L11, RNA binding domain CYB_1221 PF03946 Ribosomal protein L11, N-terminal domain CYB_1222 PF00687 Ribosomal protein L1p/L10e family CYB_1223 PF00466 Ribosomal protein L10 CYB_1224 PF00542 Ribosomal protein L7/L12 C-terminal domain CYB_1224 PF16320 CYB_1224 CYB_1226 PF00355 Rieske [2Fe-2S] domain CYB_1227 PF01385 CYB_1227 CYB_1227 PF07282 CYB_1227 CYB_1228 PF13103 TonB C terminal CYB_1229 PF01165 Ribosomal protein S21 CYB_1230 PF00089 Trypsin CYB_1230 PF17210 CYB_1230 CYB_1231 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CYB_1233 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CYB_1233 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal CYB_1233 PF13288 DXP reductoisomerase C-terminal domain CYB_1234 PF00005 ABC transporter CYB_1234 PF00664 ABC transporter transmembrane region CYB_1235 PF01225 Mur ligase family, catalytic domain CYB_1235 PF02875 Mur ligase family, glutamate ligase domain CYB_1235 PF08245 Mur ligase middle domain CYB_1236 PF00117 Glutamine amidotransferase class-I CYB_1236 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CYB_1237 PF07963 Prokaryotic N-terminal methylation motif CYB_1238 PF07963 Prokaryotic N-terminal methylation motif CYB_1239 PF07963 Prokaryotic N-terminal methylation motif CYB_1242 PF00072 Response regulator receiver domain CYB_1242 PF00196 Bacterial regulatory proteins, luxR family CYB_1243 PF00805 Pentapeptide repeats (8 copies) CYB_1244 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CYB_1244 PF06827 Zinc finger found in FPG and IleRS CYB_1244 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CYB_1245 PF02427 Photosystem I reaction centre subunit IV / PsaE CYB_1246 PF00905 Penicillin binding protein transpeptidase domain CYB_1247 PF00504 Chlorophyll A-B binding protein CYB_1248 PF00795 Carbon-nitrogen hydrolase CYB_1248 PF02540 NAD synthase CYB_1249 PF00512 His Kinase A (phospho-acceptor) domain CYB_1249 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYB_1250 PF08447 PAS fold CYB_1250 PF08448 PAS fold CYB_1251 PF01541 GIY-YIG catalytic domain CYB_1251 PF02151 UvrB/uvrC motif CYB_1251 PF08459 UvrC Helix-hairpin-helix N-terminal CYB_1251 PF12826 Helix-hairpin-helix motif CYB_1253 PF00310 Glutamine amidotransferases class-II CYB_1253 PF01493 GXGXG motif CYB_1253 PF01645 Conserved region in glutamate synthase CYB_1253 PF04898 Glutamate synthase central domain CYB_1254 PF02915 Rubrerythrin CYB_1256 PF13844 Glycosyl transferase family 41 CYB_1256 PF14559 Tetratricopeptide repeat CYB_1257 PF02417 CYB_1257 CYB_1258 PF01790 CYB_1258 CYB_1259 PF01385 CYB_1259 CYB_1259 PF07282 CYB_1259 CYB_1260 PF00174 Oxidoreductase molybdopterin binding domain CYB_1261 PF04422 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term CYB_1261 PF04432 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus CYB_1262 PF00155 Aminotransferase class I and II CYB_1263 PF01926 50S ribosome-binding GTPase CYB_1263 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CYB_1264 PF01668 SmpB protein CYB_1265 PF02608 Basic membrane protein CYB_1266 PF00043 Glutathione S-transferase, C-terminal domain CYB_1266 PF13417 Glutathione S-transferase, N-terminal domain CYB_1267 PF00355 Rieske [2Fe-2S] domain CYB_1267 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CYB_1268 PF01926 50S ribosome-binding GTPase CYB_1268 PF07650 KH domain CYB_1269 PF08486 CYB_1269 CYB_1270 PF08848 Domain of unknown function (DUF1818) CYB_1271 PF00941 FAD binding domain in molybdopterin dehydrogenase CYB_1272 PF07963 Prokaryotic N-terminal methylation motif CYB_1275 PF13586 CYB_1275 CYB_1276 PF13340 CYB_1276 CYB_1278 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CYB_1279 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CYB_1280 PF04536 TLP18 CYB_1281 PF03099 Biotin/lipoate A/B protein ligase family CYB_1282 PF10722 Putative bacterial sensory transduction regulator CYB_1283 PF01048 Phosphorylase superfamily CYB_1284 PF00565 Staphylococcal nuclease homologue CYB_1284 PF04012 CYB_1284 CYB_1286 PF13847 Methyltransferase domain CYB_1288 PF14221 CYB_1288 CYB_1289 PF00132 Bacterial transferase hexapeptide (six repeats) CYB_1289 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CYB_1290 PF05050 Methyltransferase FkbM domain CYB_1290 PF13524 Glycosyl transferases group 1 CYB_1292 PF05685 Putative restriction endonuclease CYB_1293 PF05711 Macrocin-O-methyltransferase (TylF) CYB_1293 PF13578 Methyltransferase domain CYB_1294 PF05711 Macrocin-O-methyltransferase (TylF) CYB_1294 PF13578 Methyltransferase domain CYB_1295 PF13524 Glycosyl transferases group 1 CYB_1297 PF01385 CYB_1297 CYB_1297 PF07282 CYB_1297 CYB_1298 PF01593 Flavin containing amine oxidoreductase CYB_1299 PF00528 Binding-protein-dependent transport system inner membrane component CYB_1300 PF00355 Rieske [2Fe-2S] domain CYB_1301 PF00005 ABC transporter CYB_1301 PF08402 TOBE domain CYB_1302 PF12705 PD-(D/E)XK nuclease superfamily CYB_1304 PF12169 DNA polymerase III subunits gamma and tau domain III CYB_1304 PF13177 DNA polymerase III, delta subunit CYB_1306 PF01121 Dephospho-CoA kinase CYB_1307 PF00682 HMGL-like CYB_1307 PF08502 LeuA allosteric (dimerisation) domain CYB_1309 PF02540 NAD synthase CYB_1310 PF03968 OstA-like protein CYB_1310 PF12600 CYB_1310 CYB_1311 PF08865 CYB_1311 CYB_1314 PF11360 CYB_1314 CYB_1316 PF01022 Bacterial regulatory protein, arsR family CYB_1318 PF00149 Calcineurin-like phosphoesterase CYB_1319 PF01475 Ferric uptake regulator family CYB_1320 PF03190 Protein of unknown function, DUF255 CYB_1321 PF00583 Acetyltransferase (GNAT) family CYB_1322 PF01385 CYB_1322 CYB_1322 PF07282 CYB_1322 CYB_1323 PF03364 Polyketide cyclase / dehydrase and lipid transport CYB_1324 PF03992 Antibiotic biosynthesis monooxygenase CYB_1325 PF04367 CYB_1325 CYB_1326 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CYB_1327 PF01795 MraW methylase family CYB_1330 PF00593 TonB dependent receptor CYB_1330 PF07715 TonB-dependent Receptor Plug Domain CYB_1331 PF07845 CYB_1331 CYB_1334 PF02374 Anion-transporting ATPase CYB_1335 PF00533 BRCA1 C Terminus (BRCT) domain CYB_1335 PF01653 NAD-dependent DNA ligase adenylation domain CYB_1335 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CYB_1335 PF03120 NAD-dependent DNA ligase OB-fold domain CYB_1335 PF12826 Helix-hairpin-helix motif CYB_1335 PF14520 Helix-hairpin-helix domain CYB_1336 PF06689 ClpX C4-type zinc finger CYB_1336 PF07724 AAA domain (Cdc48 subfamily) CYB_1336 PF10431 C-terminal, D2-small domain, of ClpB protein CYB_1337 PF02080 TrkA-C domain CYB_1337 PF02254 TrkA-N domain CYB_1338 PF02386 Cation transport protein CYB_1339 PF07085 DRTGG domain CYB_1339 PF13500 AAA domain CYB_1340 PF00075 RNase H CYB_1341 PF00534 Glycosyl transferases group 1 CYB_1341 PF13439 Glycosyltransferase Family 4 CYB_1342 PF11832 CYB_1342 CYB_1343 PF00072 Response regulator receiver domain CYB_1343 PF00196 Bacterial regulatory proteins, luxR family CYB_1344 PF00512 His Kinase A (phospho-acceptor) domain CYB_1344 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYB_1345 PF00512 His Kinase A (phospho-acceptor) domain CYB_1346 PF00805 Pentapeptide repeats (8 copies) CYB_1348 PF02754 CYB_1348 CYB_1350 PF01709 Transcriptional regulator CYB_1351 PF01906 Putative heavy-metal-binding CYB_1353 PF00294 pfkB family carbohydrate kinase CYB_1354 PF00072 Response regulator receiver domain CYB_1354 PF00196 Bacterial regulatory proteins, luxR family CYB_1355 PF07602 CYB_1355 CYB_1356 PF00805 Pentapeptide repeats (8 copies) CYB_1357 PF03739 CYB_1357 CYB_1358 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CYB_1358 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CYB_1359 PF00528 Binding-protein-dependent transport system inner membrane component CYB_1360 PF00005 ABC transporter CYB_1361 PF01612 3'-5' exonuclease CYB_1362 PF00253 Ribosomal protein S14p/S29e CYB_1363 PF01926 50S ribosome-binding GTPase CYB_1363 PF05128 CYB_1363 CYB_1365 PF08695 CYB_1365 CYB_1368 PF00580 UvrD/REP helicase N-terminal domain CYB_1368 PF13361 UvrD-like helicase C-terminal domain CYB_1371 PF01678 Diaminopimelate epimerase CYB_1372 PF02468 CYB_1372 CYB_1373 PF00737 Photosystem II 10 kDa phosphoprotein CYB_1374 PF07995 Glucose / Sorbosone dehydrogenase CYB_1375 PF01055 Glycosyl hydrolases family 31 CYB_1375 PF13802 Galactose mutarotase-like CYB_1375 PF16338 CYB_1375 CYB_1375 PF17137 CYB_1375 CYB_1376 PF00578 AhpC/TSA family CYB_1382 PF08245 Mur ligase middle domain CYB_1383 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CYB_1383 PF01842 ACT domain CYB_1383 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CYB_1384 PF00871 Acetokinase family CYB_1386 PF00498 FHA domain CYB_1388 PF00498 FHA domain CYB_1390 PF00288 GHMP kinases N terminal domain CYB_1390 PF08544 GHMP kinases C terminal CYB_1391 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain CYB_1391 PF02785 Biotin carboxylase C-terminal domain CYB_1391 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CYB_1392 PF00589 Phage integrase family CYB_1392 PF13495 Phage integrase, N-terminal SAM-like domain CYB_1394 PF00226 DnaJ domain CYB_1396 PF00005 ABC transporter CYB_1400 PF06055 CYB_1400 CYB_1401 PF00395 S-layer homology domain CYB_1402 PF01458 Uncharacterized protein family (UPF0051) CYB_1403 PF00005 ABC transporter CYB_1404 PF01741 Large-conductance mechanosensitive channel, MscL CYB_1405 PF01458 Uncharacterized protein family (UPF0051) CYB_1406 PF13412 Winged helix-turn-helix DNA-binding CYB_1407 PF00793 DAHP synthetase I family CYB_1408 PF02152 Dihydroneopterin aldolase CYB_1409 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) CYB_1410 PF00512 His Kinase A (phospho-acceptor) domain CYB_1410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYB_1412 PF00686 Starch binding domain CYB_1412 PF08795 CYB_1412 CYB_1412 PF13472 GDSL-like Lipase/Acylhydrolase family CYB_1414 PF00795 Carbon-nitrogen hydrolase CYB_1415 PF14279 CYB_1415 CYB_1416 PF12697 Alpha/beta hydrolase family CYB_1417 PF01583 Adenylylsulphate kinase CYB_1419 PF00202 Aminotransferase class-III CYB_1420 PF02633 Creatinine amidohydrolase CYB_1421 PF00155 Aminotransferase class I and II CYB_1422 PF13855 Leucine rich repeat CYB_1423 PF11805 CYB_1423 CYB_1424 PF01593 Flavin containing amine oxidoreductase CYB_1425 PF00742 Homoserine dehydrogenase CYB_1425 PF01842 ACT domain CYB_1425 PF03447 Homoserine dehydrogenase, NAD binding domain CYB_1426 PF06386 CYB_1426 CYB_1427 PF01975 Survival protein SurE CYB_1428 PF11780 CYB_1428 CYB_1429 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CYB_1429 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CYB_1430 PF07690 Major Facilitator Superfamily CYB_1431 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CYB_1434 PF00210 Ferritin-like domain CYB_1435 PF00535 Glycosyl transferase family 2 CYB_1436 PF01926 50S ribosome-binding GTPase CYB_1436 PF05128 CYB_1436 CYB_1437 PF01430 Hsp33 protein CYB_1438 PF00502 Phycobilisome protein CYB_1439 PF00502 Phycobilisome protein CYB_1440 PF01383 CpcD/allophycocyanin linker domain CYB_1441 PF00005 ABC transporter CYB_1442 PF00682 HMGL-like CYB_1442 PF08502 LeuA allosteric (dimerisation) domain CYB_1443 PF00797 N-acetyltransferase CYB_1444 PF02597 ThiS family CYB_1445 PF00013 KH domain CYB_1445 PF00575 S1 RNA binding domain CYB_1445 PF01138 3' exoribonuclease family, domain 1 CYB_1445 PF03725 3' exoribonuclease family, domain 2 CYB_1445 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CYB_1446 PF05226 CYB_1446 CYB_1446 PF07730 Histidine kinase CYB_1447 PF00504 Chlorophyll A-B binding protein CYB_1448 PF01243 Pyridoxamine 5'-phosphate oxidase CYB_1449 PF12697 Alpha/beta hydrolase family CYB_1450 PF01385 CYB_1450 CYB_1450 PF07282 CYB_1450 CYB_1452 PF03358 NADPH-dependent FMN reductase CYB_1453 PF01590 GAF domain CYB_1454 PF02361 Cobalt transport protein CYB_1455 PF00226 DnaJ domain CYB_1455 PF08239 Bacterial SH3 domain CYB_1456 PF04248 Domain of unknown function (DUF427) CYB_1457 PF00027 Cyclic nucleotide-binding domain CYB_1457 PF13545 Crp-like helix-turn-helix domain CYB_1458 PF04542 Sigma-70 region 2 CYB_1458 PF08281 Sigma-70, region 4 CYB_1461 PF11378 CYB_1461 CYB_1462 PF00395 S-layer homology domain CYB_1463 PF02392 CYB_1463 CYB_1464 PF13416 Bacterial extracellular solute-binding protein CYB_1465 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein CYB_1466 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein CYB_1467 PF00005 ABC transporter CYB_1468 PF00528 Binding-protein-dependent transport system inner membrane component CYB_1469 PF00528 Binding-protein-dependent transport system inner membrane component CYB_1471 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains CYB_1472 PF00741 CYB_1472 CYB_1472 PF05121 CYB_1472 CYB_1473 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CYB_1474 PF06146 CYB_1474 CYB_1475 PF10013 CYB_1475 CYB_1477 PF00140 Sigma-70 factor, region 1 CYB_1477 PF04539 Sigma-70 region 3 CYB_1477 PF04542 Sigma-70 region 2 CYB_1477 PF04545 Sigma-70, region 4 CYB_1478 PF00117 Glutamine amidotransferase class-I CYB_1478 PF06418 CTP synthase N-terminus CYB_1480 PF00248 Aldo/keto reductase family CYB_1481 PF00122 E1-E2 ATPase CYB_1481 PF00403 Heavy-metal-associated domain CYB_1481 PF00702 haloacid dehalogenase-like hydrolase CYB_1482 PF14332 CYB_1482 CYB_1483 PF14332 CYB_1483 CYB_1484 PF03259 Roadblock/LC7 domain CYB_1485 PF11563 Protoglobin CYB_1486 PF03029 Conserved hypothetical ATP binding protein CYB_1487 PF00156 Phosphoribosyl transferase domain CYB_1488 PF01522 Polysaccharide deacetylase CYB_1490 PF02446 4-alpha-glucanotransferase CYB_1492 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CYB_1492 PF03129 Anticodon binding domain CYB_1492 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CYB_1493 PF01966 HD domain CYB_1493 PF02541 Ppx/GppA phosphatase family CYB_1494 PF00395 S-layer homology domain CYB_1495 PF00283 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits CYB_1495 PF00284 Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit CYB_1496 PF00283 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits CYB_1497 PF02419 PsbL protein CYB_1498 PF01788 PsbJ CYB_1499 PF02605 Photosystem I reaction centre subunit XI CYB_1500 PF00796 Photosystem I reaction centre subunit VIII CYB_1502 PF01553 Acyltransferase CYB_1503 PF00012 Hsp70 protein CYB_1504 PF13443 Cro/C1-type HTH DNA-binding domain CYB_1508 PF00291 Pyridoxal-phosphate dependent enzyme CYB_1509 PF01871 AMMECR1 CYB_1510 PF03309 Type III pantothenate kinase CYB_1511 PF01264 Chorismate synthase CYB_1512 PF13481 AAA domain CYB_1512 PF13541 Subunit ChlI of Mg-chelatase CYB_1513 PF05685 Putative restriction endonuclease CYB_1514 PF00152 tRNA synthetases class II (D, K and N) CYB_1514 PF01336 OB-fold nucleic acid binding domain CYB_1515 PF00069 Protein kinase domain CYB_1515 PF00515 Tetratricopeptide repeat CYB_1515 PF13174 Tetratricopeptide repeat CYB_1515 PF13181 Tetratricopeptide repeat CYB_1515 PF13371 Tetratricopeptide repeat CYB_1515 PF13414 TPR repeat CYB_1515 PF13432 Tetratricopeptide repeat CYB_1516 PF04234 CopC domain CYB_1516 PF05425 CYB_1516 CYB_1517 PF07987 Domain of unkown function (DUF1775) CYB_1518 PF01744 CYB_1518 CYB_1519 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CYB_1520 PF01807 CHC2 zinc finger CYB_1520 PF08275 DNA primase catalytic core, N-terminal domain CYB_1520 PF13155 Toprim-like CYB_1521 PF01411 tRNA synthetases class II (A) CYB_1521 PF02272 DHHA1 domain CYB_1521 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CYB_1522 PF00069 Protein kinase domain CYB_1522 PF00805 Pentapeptide repeats (8 copies) CYB_1525 PF00248 Aldo/keto reductase family CYB_1526 PF14076 CYB_1526 CYB_1527 PF10049 CYB_1527 CYB_1529 PF13772 AIG2-like family CYB_1530 PF00929 Exonuclease CYB_1530 PF13191 AAA ATPase domain CYB_1534 PF00318 Ribosomal protein S2 CYB_1535 PF00889 Elongation factor TS CYB_1536 PF01979 Amidohydrolase family CYB_1537 PF08331 CYB_1537 CYB_1537 PF13484 CYB_1537 CYB_1538 PF00004 ATPase family associated with various cellular activities (AAA) CYB_1539 PF00712 DNA polymerase III beta subunit, N-terminal domain CYB_1539 PF02767 DNA polymerase III beta subunit, central domain CYB_1539 PF02768 DNA polymerase III beta subunit, C-terminal domain CYB_1543 PF02824 TGS domain CYB_1543 PF04607 Region found in RelA / SpoT proteins CYB_1543 PF13291 ACT domain CYB_1543 PF13328 HD domain CYB_1544 PF14217 CYB_1544 CYB_1545 PF00224 Pyruvate kinase, barrel domain CYB_1545 PF00391 PEP-utilising enzyme, mobile domain CYB_1545 PF02887 Pyruvate kinase, alpha/beta domain CYB_1548 PF06386 CYB_1548 CYB_1549 PF00483 Nucleotidyl transferase CYB_1550 PF01634 ATP phosphoribosyltransferase CYB_1551 PF01716 Manganese-stabilising protein / photosystem II polypeptide CYB_1554 PF01266 FAD dependent oxidoreductase CYB_1555 PF00005 ABC transporter CYB_1556 PF01370 NAD dependent epimerase/dehydratase family CYB_1557 PF02687 CYB_1557 CYB_1557 PF12704 MacB-like periplasmic core domain CYB_1558 PF13437 HlyD family secretion protein CYB_1559 PF01225 Mur ligase family, catalytic domain CYB_1559 PF02875 Mur ligase family, glutamate ligase domain CYB_1559 PF08245 Mur ligase middle domain CYB_1560 PF01565 FAD binding domain CYB_1560 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CYB_1563 PF12146 Putative lysophospholipase CYB_1564 PF12204 Domain of unknown function (DUF3598) CYB_1565 PF02535 CYB_1565 CYB_1566 PF13586 CYB_1566 CYB_1567 PF13340 CYB_1567 CYB_1568 PF01118 Semialdehyde dehydrogenase, NAD binding domain CYB_1568 PF02774 Semialdehyde dehydrogenase, dimerisation domain CYB_1570 PF01761 3-dehydroquinate synthase CYB_1571 PF13181 Tetratricopeptide repeat CYB_1571 PF13414 TPR repeat CYB_1571 PF13428 Tetratricopeptide repeat CYB_1571 PF13432 Tetratricopeptide repeat CYB_1571 PF13676 TIR domain CYB_1573 PF03061 Thioesterase superfamily CYB_1575 PF13620 Carboxypeptidase regulatory-like domain CYB_1576 PF13620 Carboxypeptidase regulatory-like domain CYB_1577 PF00444 Ribosomal protein L36 CYB_1578 PF00416 Ribosomal protein S13/S18 CYB_1579 PF00411 Ribosomal protein S11 CYB_1580 PF01000 RNA polymerase Rpb3/RpoA insert domain CYB_1580 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CYB_1580 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CYB_1581 PF01196 Ribosomal protein L17 CYB_1582 PF01416 tRNA pseudouridine synthase CYB_1583 PF00572 Ribosomal protein L13 CYB_1584 PF00380 Ribosomal protein S9/S16 CYB_1585 PF01197 Ribosomal protein L31 CYB_1586 PF00472 RF-1 domain CYB_1586 PF03462 PCRF domain CYB_1587 PF00330 Aconitase family (aconitate hydratase) CYB_1587 PF06434 Aconitate hydratase 2 N-terminus CYB_1587 PF11791 Aconitate B N-terminal domain CYB_1589 PF00011 Hsp20/alpha crystallin family CYB_1590 PF00005 ABC transporter CYB_1591 PF01385 CYB_1591 CYB_1591 PF07282 CYB_1591 CYB_1592 PF13847 Methyltransferase domain CYB_1598 PF00111 2Fe-2S iron-sulfur cluster binding domain CYB_1601 PF05685 Putative restriction endonuclease CYB_1605 PF01425 Amidase CYB_1606 PF03912 Psb28 protein CYB_1607 PF02595 Glycerate kinase family CYB_1608 PF05542 CYB_1608 CYB_1609 PF00521 DNA gyrase/topoisomerase IV, subunit A CYB_1609 PF03989 DNA gyrase C-terminal domain, beta-propeller CYB_1610 PF01007 Inward rectifier potassium channel CYB_1611 PF00916 CYB_1611 CYB_1611 PF01740 STAS domain CYB_1613 PF00395 S-layer homology domain CYB_1613 PF04966 Carbohydrate-selective porin, OprB family CYB_1616 PF00478 IMP dehydrogenase / GMP reductase domain CYB_1617 PF04250 CYB_1617 CYB_1618 PF00118 TCP-1/cpn60 chaperonin family CYB_1619 PF00166 Chaperonin 10 Kd subunit CYB_1620 PF02567 Phenazine biosynthesis-like protein CYB_1621 PF01333 Apocytochrome F, C-terminal CYB_1621 PF16639 CYB_1621 CYB_1622 PF00355 Rieske [2Fe-2S] domain CYB_1622 PF08802 Cytochrome B6-F complex Fe-S subunit CYB_1623 PF11267 Protein of unknown function (DUF3067) CYB_1625 PF14559 Tetratricopeptide repeat CYB_1626 PF09367 CpeS-like protein CYB_1628 PF00595 PDZ domain (Also known as DHR or GLGF) CYB_1628 PF03572 Peptidase family S41 CYB_1629 PF00033 Cytochrome b(N-terminal)/b6/petB CYB_1630 PF00032 Cytochrome b(C-terminal)/b6/petD CYB_1631 PF00180 Isocitrate/isopropylmalate dehydrogenase CYB_1632 PF01207 Dihydrouridine synthase (Dus) CYB_1633 PF01084 Ribosomal protein S18 CYB_1634 PF00471 Ribosomal protein L33 CYB_1635 PF06271 CYB_1635 CYB_1636 PF12706 Beta-lactamase superfamily domain CYB_1638 PF01521 Iron-sulphur cluster biosynthesis CYB_1639 PF00072 Response regulator receiver domain CYB_1639 PF00512 His Kinase A (phospho-acceptor) domain CYB_1639 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYB_1640 PF00072 Response regulator receiver domain CYB_1640 PF00512 His Kinase A (phospho-acceptor) domain CYB_1640 PF01627 Hpt domain CYB_1640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYB_1640 PF08447 PAS fold CYB_1640 PF08448 PAS fold CYB_1640 PF13188 PAS domain CYB_1641 PF00122 E1-E2 ATPase CYB_1641 PF00689 Cation transporting ATPase, C-terminus CYB_1641 PF00690 Cation transporter/ATPase, N-terminus CYB_1641 PF00702 haloacid dehalogenase-like hydrolase CYB_1644 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CYB_1644 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CYB_1645 PF02457 DisA bacterial checkpoint controller nucleotide-binding CYB_1646 PF01255 Putative undecaprenyl diphosphate synthase CYB_1647 PF11833 CYB_1647 CYB_1648 PF00266 Aminotransferase class-V CYB_1649 PF01098 CYB_1649 CYB_1650 PF05154 CYB_1650 CYB_1651 PF00005 ABC transporter CYB_1652 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CYB_1652 PF14572 Phosphoribosyl synthetase-associated domain CYB_1653 PF00989 PAS fold CYB_1653 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYB_1653 PF07568 CYB_1653 CYB_1653 PF08447 PAS fold CYB_1653 PF13426 PAS domain CYB_1654 PF00072 Response regulator receiver domain CYB_1655 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel CYB_1656 PF00586 AIR synthase related protein, N-terminal domain CYB_1656 PF02769 AIR synthase related protein, C-terminal domain CYB_1657 PF00005 ABC transporter CYB_1658 PF12679 CYB_1658 CYB_1659 PF09822 CYB_1659 CYB_1660 PF14238 CYB_1660 CYB_1661 PF00582 Universal stress protein family CYB_1662 PF00246 Zinc carboxypeptidase CYB_1663 PF00436 Single-strand binding protein family CYB_1664 PF01250 Ribosomal protein S6 CYB_1665 PF00550 Phosphopantetheine attachment site CYB_1666 PF00109 Beta-ketoacyl synthase, N-terminal domain CYB_1666 PF02801 Beta-ketoacyl synthase, C-terminal domain CYB_1668 PF02547 Queuosine biosynthesis protein CYB_1669 PF13419 Haloacid dehalogenase-like hydrolase CYB_1670 PF00692 dUTPase CYB_1671 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CYB_1672 PF01609 Transposase DDE domain CYB_1673 PF13340 CYB_1673 CYB_1675 PF09992 Predicted periplasmic protein (DUF2233) CYB_1677 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CYB_1678 PF00180 Isocitrate/isopropylmalate dehydrogenase CYB_1679 PF13185 GAF domain CYB_1680 PF00749 tRNA synthetases class I (E and Q), catalytic domain CYB_1683 PF00919 Uncharacterized protein family UPF0004 CYB_1683 PF01938 TRAM domain CYB_1683 PF04055 Radical SAM superfamily CYB_1684 PF03965 Penicillinase repressor CYB_1685 PF01435 Peptidase family M48 CYB_1687 PF00696 Amino acid kinase family CYB_1688 PF01385 CYB_1688 CYB_1688 PF07282 CYB_1688 CYB_1689 PF00005 ABC transporter CYB_1689 PF00664 ABC transporter transmembrane region CYB_1691 PF00004 ATPase family associated with various cellular activities (AAA) CYB_1692 PF06868 CYB_1692 CYB_1693 PF00162 Phosphoglycerate kinase CYB_1694 PF01593 Flavin containing amine oxidoreductase CYB_1695 PF00494 Squalene/phytoene synthase CYB_1696 PF00270 DEAD/DEAH box helicase CYB_1696 PF00271 Helicase conserved C-terminal domain CYB_1696 PF09369 CYB_1696 CYB_1697 PF01061 CYB_1697 CYB_1698 PF01850 PIN domain CYB_1699 PF09957 CYB_1699 CYB_1700 PF02384 N-6 DNA Methylase CYB_1700 PF04480 Protein of unknown function (DUF559) CYB_1701 PF00176 SNF2 family N-terminal domain CYB_1701 PF00271 Helicase conserved C-terminal domain CYB_1702 PF00027 Cyclic nucleotide-binding domain CYB_1704 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CYB_1704 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CYB_1705 PF13563 2'-5' RNA ligase superfamily CYB_1706 PF01553 Acyltransferase CYB_1708 PF05685 Putative restriction endonuclease CYB_1709 PF13508 Acetyltransferase (GNAT) domain CYB_1710 PF01266 FAD dependent oxidoreductase CYB_1711 PF04839 Plastid and cyanobacterial ribosomal protein (PSRP-3 / Ycf65) CYB_1712 PF00118 TCP-1/cpn60 chaperonin family CYB_1713 PF14251 CYB_1713 CYB_1714 PF14326 CYB_1714 CYB_1716 PF14559 Tetratricopeptide repeat CYB_1719 PF04465 CYB_1719 CYB_1720 PF12635 CYB_1720 CYB_1722 PF01385 CYB_1722 CYB_1722 PF07282 CYB_1722 CYB_1723 PF04255 Protein of unknown function (DUF433) CYB_1724 PF06634 CYB_1724 CYB_1725 PF05168 HEPN domain CYB_1726 PF01909 Nucleotidyltransferase domain CYB_1727 PF00176 SNF2 family N-terminal domain CYB_1727 PF00271 Helicase conserved C-terminal domain CYB_1727 PF13091 PLD-like domain CYB_1728 PF05685 Putative restriction endonuclease CYB_1729 PF05685 Putative restriction endonuclease CYB_1730 PF13646 HEAT repeats CYB_1733 PF03602 Conserved hypothetical protein 95 CYB_1734 PF00534 Glycosyl transferases group 1 CYB_1734 PF08323 Starch synthase catalytic domain CYB_1736 PF00124 Photosynthetic reaction centre protein CYB_1737 PF01202 Shikimate kinase CYB_1738 PF00677 Lumazine binding domain CYB_1739 PF00005 ABC transporter CYB_1739 PF12848 ABC transporter CYB_1740 PF00072 Response regulator receiver domain CYB_1741 PF01138 3' exoribonuclease family, domain 1 CYB_1741 PF03725 3' exoribonuclease family, domain 2 CYB_1742 PF01385 CYB_1742 CYB_1742 PF07282 CYB_1742 CYB_1743 PF04481 CYB_1743 CYB_1744 PF00491 Arginase family CYB_1745 PF01145 SPFH domain / Band 7 family CYB_1746 PF01168 Alanine racemase, N-terminal domain CYB_1747 PF04472 Protein of unknown function (DUF552) CYB_1748 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYB_1749 PF03807 NADP oxidoreductase coenzyme F420-dependent CYB_1749 PF14748 Pyrroline-5-carboxylate reductase dimerisation CYB_1750 PF03652 Uncharacterised protein family (UPF0081) CYB_1751 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CYB_1751 PF05221 S-adenosyl-L-homocysteine hydrolase CYB_1752 PF00764 Arginosuccinate synthase CYB_1754 PF12831 FAD dependent oxidoreductase CYB_1755 PF13586 CYB_1755 CYB_1756 PF13340 CYB_1756 CYB_1757 PF02355 Protein export membrane protein CYB_1757 PF07549 SecD/SecF GG Motif CYB_1758 PF02355 Protein export membrane protein CYB_1758 PF07549 SecD/SecF GG Motif CYB_1759 PF07282 CYB_1759 CYB_1761 PF01494 FAD binding domain CYB_1762 PF13343 Bacterial extracellular solute-binding protein CYB_1763 PF03652 Uncharacterised protein family (UPF0081) CYB_1764 PF11283 CYB_1764 CYB_1765 PF02779 Transketolase, pyrimidine binding domain CYB_1765 PF02780 Transketolase, C-terminal domain CYB_1766 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CYB_1767 PF00248 Aldo/keto reductase family CYB_1767 PF13534 4Fe-4S dicluster domain CYB_1769 PF10742 CYB_1769 CYB_1771 PF05685 Putative restriction endonuclease CYB_1772 PF01613 Flavin reductase like domain CYB_1773 PF00512 His Kinase A (phospho-acceptor) domain CYB_1773 PF01590 GAF domain CYB_1773 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYB_1773 PF08447 PAS fold CYB_1773 PF08448 PAS fold CYB_1773 PF13185 GAF domain CYB_1775 PF05685 Putative restriction endonuclease CYB_1776 PF00079 Serpin (serine protease inhibitor) CYB_1778 PF02643 Uncharacterized ACR, COG1430 CYB_1779 PF00106 short chain dehydrogenase CYB_1780 PF14344 CYB_1780 CYB_1781 PF02511 Thymidylate synthase complementing protein CYB_1782 PF13489 Methyltransferase domain CYB_1783 PF02397 CYB_1783 CYB_1783 PF13727 CoA-binding domain CYB_1784 PF01259 SAICAR synthetase CYB_1786 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CYB_1786 PF03900 Porphobilinogen deaminase, C-terminal domain CYB_1787 PF11068 YlqD protein CYB_1788 PF13641 Glycosyltransferase like family 2 CYB_1789 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CYB_1789 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain CYB_1790 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CYB_1790 PF02403 Seryl-tRNA synthetase N-terminal domain CYB_1792 PF00936 BMC domain CYB_1794 PF00101 Ribulose bisphosphate carboxylase, small chain CYB_1794 PF00132 Bacterial transferase hexapeptide (six repeats) CYB_1795 PF03319 Ethanolamine utilisation protein EutN/carboxysome CYB_1796 PF00936 BMC domain CYB_1797 PF00936 BMC domain CYB_1798 PF00005 ABC transporter CYB_1799 PF08478 POTRA domain, FtsQ-type CYB_1800 PF11910 CYB_1800 CYB_1803 PF00127 Copper binding proteins, plastocyanin/azurin family CYB_1805 PF11211 CYB_1805 CYB_1806 PF02080 TrkA-C domain CYB_1806 PF02254 TrkA-N domain CYB_1806 PF07885 Ion channel CYB_1807 PF02811 PHP domain CYB_1808 PF00266 Aminotransferase class-V CYB_1810 PF10216 CYB_1810 CYB_1811 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains CYB_1812 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains CYB_1812 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CYB_1815 PF02581 Thiamine monophosphate synthase/TENI CYB_1816 PF00004 ATPase family associated with various cellular activities (AAA) CYB_1817 PF00226 DnaJ domain CYB_1818 PF00883 Cytosol aminopeptidase family, catalytic domain CYB_1818 PF02789 Cytosol aminopeptidase family, N-terminal domain CYB_1819 PF08495 CYB_1819 CYB_1819 PF10442 CYB_1819 CYB_1820 PF01476 LysM domain CYB_1820 PF01551 Peptidase family M23 CYB_1821 PF01406 tRNA synthetases class I (C) catalytic domain CYB_1821 PF09190 DALR domain CYB_1822 PF04055 Radical SAM superfamily CYB_1822 PF10105 CYB_1822 CYB_1823 PF10150 Ribonuclease E/G family CYB_1824 PF01351 Ribonuclease HII CYB_1826 PF01385 CYB_1826 CYB_1826 PF07282 CYB_1826 CYB_1827 PF00174 Oxidoreductase molybdopterin binding domain CYB_1828 PF03968 OstA-like protein CYB_1829 PF00741 CYB_1829 CYB_1830 PF07728 AAA domain (dynein-related subfamily) CYB_1833 PF00741 CYB_1833 CYB_1835 PF02830 V4R domain CYB_1837 PF00502 Phycobilisome protein CYB_1838 PF02830 V4R domain CYB_1839 PF07736 Chorismate mutase type I CYB_1841 PF07444 CYB_1841 CYB_1842 PF00311 Phosphoenolpyruvate carboxylase CYB_1847 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CYB_1847 PF01872 RibD C-terminal domain CYB_1852 PF07082 CYB_1852 CYB_1854 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CYB_1856 PF13369 CYB_1856 CYB_1856 PF13371 Tetratricopeptide repeat CYB_1858 PF02681 CYB_1858 CYB_1859 PF00348 Polyprenyl synthetase CYB_1861 PF01208 Uroporphyrinogen decarboxylase (URO-D) CYB_1862 PF00459 Inositol monophosphatase family CYB_1863 PF00535 Glycosyl transferase family 2 CYB_1864 PF00069 Protein kinase domain CYB_1865 PF00450 Serine carboxypeptidase CYB_1867 PF00586 AIR synthase related protein, N-terminal domain CYB_1867 PF02769 AIR synthase related protein, C-terminal domain CYB_1868 PF08241 Methyltransferase domain CYB_1870 PF01061 CYB_1870 CYB_1871 PF00005 ABC transporter CYB_1871 PF13732 CYB_1871 CYB_1872 PF01385 CYB_1872 CYB_1872 PF07282 CYB_1872 CYB_1874 PF00266 Aminotransferase class-V CYB_1875 PF00009 Elongation factor Tu GTP binding domain CYB_1875 PF16658 CYB_1875 CYB_1877 PF13614 AAA domain CYB_1878 PF00155 Aminotransferase class I and II CYB_1881 PF00005 ABC transporter CYB_1882 PF00005 ABC transporter CYB_1882 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CYB_1883 PF00528 Binding-protein-dependent transport system inner membrane component CYB_1884 PF00528 Binding-protein-dependent transport system inner membrane component CYB_1885 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CYB_1886 PF01717 Cobalamin-independent synthase, Catalytic domain CYB_1886 PF08267 Cobalamin-independent synthase, N-terminal domain CYB_1887 PF00005 ABC transporter CYB_1888 PF03808 CYB_1888 CYB_1889 PF13668 Ferritin-like domain CYB_1892 PF13275 S4 domain CYB_1893 PF00171 Aldehyde dehydrogenase family CYB_1894 PF13354 Beta-lactamase enzyme family CYB_1895 PF00512 His Kinase A (phospho-acceptor) domain CYB_1895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYB_1895 PF07689 KaiB domain CYB_1896 PF11688 CYB_1896 CYB_1897 PF01551 Peptidase family M23 CYB_1898 PF00005 ABC transporter CYB_1899 PF01081 KDPG and KHG aldolase CYB_1900 PF02130 Uncharacterized protein family UPF0054 CYB_1901 PF01219 Prokaryotic diacylglycerol kinase CYB_1902 PF00288 GHMP kinases N terminal domain CYB_1902 PF08544 GHMP kinases C terminal CYB_1903 PF03600 Citrate transporter CYB_1904 PF00106 short chain dehydrogenase CYB_1908 PF00285 Citrate synthase CYB_1909 PF03773 CYB_1909 CYB_1910 PF01724 Domain of unknown function DUF29 CYB_1911 PF01565 FAD binding domain CYB_1912 PF00005 ABC transporter CYB_1913 PF00528 Binding-protein-dependent transport system inner membrane component CYB_1914 PF00528 Binding-protein-dependent transport system inner membrane component CYB_1915 PF12849 PBP superfamily domain CYB_1917 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CYB_1917 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CYB_1918 PF00206 Lyase CYB_1918 PF10397 Adenylosuccinate lyase C-terminus CYB_1919 PF05685 Putative restriction endonuclease CYB_1920 PF00515 Tetratricopeptide repeat CYB_1920 PF13181 Tetratricopeptide repeat CYB_1921 PF03099 Biotin/lipoate A/B protein ligase family CYB_1922 PF00085 Thioredoxin CYB_1923 PF00916 CYB_1923 CYB_1923 PF01740 STAS domain CYB_1925 PF00581 Rhodanese-like domain CYB_1925 PF11127 Protein of unknown function (DUF2892) CYB_1926 PF01724 Domain of unknown function DUF29 CYB_1927 PF00753 Metallo-beta-lactamase superfamily CYB_1928 PF01022 Bacterial regulatory protein, arsR family CYB_1929 PF16363 CYB_1929 CYB_1930 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CYB_1930 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CYB_1930 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CYB_1931 PF01545 Cation efflux family CYB_1931 PF16916 CYB_1931 CYB_1932 PF00149 Calcineurin-like phosphoesterase CYB_1933 PF14681 Uracil phosphoribosyltransferase CYB_1934 PF00072 Response regulator receiver domain CYB_1934 PF01584 CheW-like domain CYB_1934 PF01627 Hpt domain CYB_1934 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYB_1934 PF02895 Signal transducing histidine kinase, homodimeric domain CYB_1935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CYB_1935 PF00672 HAMP domain CYB_1935 PF14559 Tetratricopeptide repeat CYB_1936 PF01584 CheW-like domain CYB_1937 PF00072 Response regulator receiver domain CYB_1938 PF00072 Response regulator receiver domain CYB_1939 PF00072 Response regulator receiver domain CYB_1939 PF14332 CYB_1939 CYB_1940 PF02325 CYB_1940 CYB_1941 PF00766 Electron transfer flavoprotein FAD-binding domain CYB_1941 PF01012 Electron transfer flavoprotein domain CYB_1942 PF01012 Electron transfer flavoprotein domain CYB_1943 PF09084 NMT1/THI5 like CYB_1944 PF00750 tRNA synthetases class I (R) CYB_1944 PF03485 Arginyl tRNA synthetase N terminal domain CYB_1944 PF05746 DALR anticodon binding domain CYB_1948 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYB_1948 PF03466 LysR substrate binding domain CYB_1949 PF04244 Deoxyribodipyrimidine photo-lyase-related protein CYB_1950 PF03477 ATP cone domain CYB_1958 PF02678 Pirin CYB_1959 PF02367 Uncharacterised P-loop hydrolase UPF0079 CYB_1960 PF01790 CYB_1960 CYB_1961 PF00154 recA bacterial DNA recombination protein CYB_1962 PF00588 SpoU rRNA Methylase family CYB_1962 PF08032 RNA 2'-O ribose methyltransferase substrate binding CYB_1963 PF01029 NusB family CYB_1963 PF01189 NOL1/NOP2/sun family CYB_1964 PF00977 Histidine biosynthesis protein CYB_1965 PF01546 Peptidase family M20/M25/M40 CYB_1965 PF07687 Peptidase dimerisation domain CYB_1967 PF01935 Domain of unknown function DUF87 CYB_1969 PF09376 NurA domain CYB_1970 PF02463 RecF/RecN/SMC N terminal domain CYB_1970 PF13476 AAA domain CYB_1971 PF00149 Calcineurin-like phosphoesterase CYB_1972 PF01062 CYB_1972 CYB_1973 PF13565 CYB_1973 CYB_1974 PF04542 Sigma-70 region 2 CYB_1974 PF10099 CYB_1974 CYB_1975 PF02416 mttA/Hcf106 family CYB_1977 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CYB_1977 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYB_1978 PF00128 Alpha amylase, catalytic domain CYB_1978 PF02806 Alpha amylase, C-terminal all-beta domain CYB_1978 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CYB_1979 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CYB_1980 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CYB_1982 PF00291 Pyridoxal-phosphate dependent enzyme CYB_1983 PF02779 Transketolase, pyrimidine binding domain CYB_1983 PF02780 Transketolase, C-terminal domain CYB_1983 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CYB_1984 PF13414 TPR repeat CYB_1984 PF13432 Tetratricopeptide repeat CYB_1984 PF14559 Tetratricopeptide repeat CYB_1985 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CYB_1985 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CYB_1986 PF00316 Fructose-1-6-bisphosphatase CYB_1987 PF00920 Dehydratase family CYB_1988 PF05787 Bacterial protein of unknown function (DUF839) CYB_1989 PF09852 CYB_1989 CYB_1990 PF03702 Uncharacterised protein family (UPF0075) CYB_1991 PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase CYB_1993 PF00551 Formyl transferase CYB_1993 PF02911 Formyl transferase, C-terminal domain CYB_1994 PF04002 RadC-like JAB domain CYB_1995 PF13231 CYB_1995 CYB_1996 PF08547 Complex I intermediate-associated protein 30 (CIA30) CYB_1997 PF00266 Aminotransferase class-V CYB_1998 PF00504 Chlorophyll A-B binding protein CYB_1999 PF00504 Chlorophyll A-B binding protein CYB_2001 PF00072 Response regulator receiver domain CYB_2001 PF00196 Bacterial regulatory proteins, luxR family CYB_2002 PF01694 Rhomboid family CYB_2003 PF05685 Putative restriction endonuclease CYB_2004 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains CYB_2005 PF01112 Asparaginase CYB_2006 PF00962 Adenosine/AMP deaminase CYB_2008 PF00581 Rhodanese-like domain CYB_2009 PF04951 D-aminopeptidase CYB_2011 PF00005 ABC transporter CYB_2012 PF00005 ABC transporter CYB_2012 PF12399 Branched-chain amino acid ATP-binding cassette transporter CYB_2013 PF02653 CYB_2013 CYB_2014 PF02653 CYB_2014 CYB_2015 PF10518 TAT (twin-arginine translocation) pathway signal sequence CYB_2015 PF13433 Periplasmic binding protein domain CYB_2016 PF00326 Prolyl oligopeptidase family CYB_2017 PF05685 Putative restriction endonuclease CYB_2018 PF02814 UreE urease accessory protein, N-terminal domain CYB_2018 PF05194 UreE urease accessory protein, C-terminal domain CYB_2020 PF05597 CYB_2020 CYB_2021 PF00694 Aconitase C-terminal domain CYB_2023 PF01728 FtsJ-like methyltransferase CYB_2025 PF01957 NfeD-like C-terminal, partner-binding CYB_2026 PF01385 CYB_2026 CYB_2026 PF07282 CYB_2026 CYB_2028 PF13482 RNase_H superfamily CYB_2030 PF00005 ABC transporter CYB_2031 PF00072 Response regulator receiver domain CYB_2031 PF00486 Transcriptional regulatory protein, C terminal CYB_2033 PF08239 Bacterial SH3 domain CYB_2035 PF01891 Cobalt uptake substrate-specific transmembrane region CYB_2036 PF02361 Cobalt transport protein CYB_2037 PF00919 Uncharacterized protein family UPF0004 CYB_2037 PF01938 TRAM domain CYB_2037 PF04055 Radical SAM superfamily CYB_2038 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CYB_2039 PF01225 Mur ligase family, catalytic domain CYB_2039 PF02875 Mur ligase family, glutamate ligase domain CYB_2039 PF08245 Mur ligase middle domain CYB_2040 PF11332 CYB_2040 CYB_2041 PF02469 Fasciclin domain CYB_2043 PF03575 Peptidase family S51 CYB_2044 PF01715 IPP transferase CYB_2045 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CYB_2045 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CYB_2045 PF16582 CYB_2045 CYB_2047 PF00834 Ribulose-phosphate 3 epimerase family CYB_2050 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CYB_2051 PF01256 Carbohydrate kinase CYB_2051 PF03853 YjeF-related protein N-terminus CYB_2054 PF14261 CYB_2054 CYB_2055 PF02673 CYB_2055 CYB_2056 PF10989 CYB_2056 CYB_2057 PF01737 YCF9 CYB_2059 PF02592 CYB_2059 CYB_2060 PF00072 Response regulator receiver domain CYB_2061 PF08241 Methyltransferase domain CYB_2063 PF10674 Protein of unknown function (DUF2488) CYB_2064 PF07690 Major Facilitator Superfamily CYB_2065 PF00534 Glycosyl transferases group 1 CYB_2065 PF13439 Glycosyltransferase Family 4 CYB_2066 PF07228 Stage II sporulation protein E (SpoIIE) CYB_2066 PF13492 GAF domain CYB_2067 PF13340 CYB_2067 CYB_2068 PF13586 CYB_2068 CYB_2070 PF00206 Lyase CYB_2070 PF14698 Argininosuccinate lyase C-terminal CYB_2071 PF01385 CYB_2071 CYB_2071 PF07282 CYB_2071 CYB_2073 PF14464 Prokaryotic homologs of the JAB domain CYB_2074 PF02597 ThiS family CYB_2075 PF00581 Rhodanese-like domain CYB_2075 PF00899 ThiF family CYB_2077 PF00925 GTP cyclohydrolase II CYB_2077 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CYB_2078 PF00392 Bacterial regulatory proteins, gntR family CYB_2079 PF00005 ABC transporter CYB_2079 PF08402 TOBE domain CYB_2081 PF07681 CYB_2081 CYB_2082 PF02503 Polyphosphate kinase middle domain CYB_2082 PF13089 Polyphosphate kinase N-terminal domain CYB_2082 PF13090 Polyphosphate kinase C-terminal domain CYB_2083 PF02653 CYB_2083 CYB_2084 PF02653 CYB_2084 CYB_2085 PF13340 CYB_2085 CYB_2086 PF13586 CYB_2086 CYB_2087 PF06835 Lipopolysaccharide-assembly, LptC-related CYB_2088 PF00884 Sulfatase CYB_2089 PF12049 CYB_2089 CYB_2090 PF13561 Enoyl-(Acyl carrier protein) reductase CYB_2091 PF01019 Gamma-glutamyltranspeptidase CYB_2092 PF13419 Haloacid dehalogenase-like hydrolase CYB_2093 PF05728 Uncharacterised protein family (UPF0227) CYB_2094 PF03840 Preprotein translocase SecG subunit CYB_2096 PF03358 NADPH-dependent FMN reductase CYB_2098 PF01724 Domain of unknown function DUF29 CYB_2099 PF01029 NusB family CYB_2100 PF00580 UvrD/REP helicase N-terminal domain CYB_2100 PF13361 UvrD-like helicase C-terminal domain CYB_2101 PF08282 haloacid dehalogenase-like hydrolase CYB_2102 PF07466 CYB_2102 CYB_2104 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CYB_2106 PF03130 PBS lyase HEAT-like repeat CYB_2106 PF13646 HEAT repeats CYB_2107 PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus CYB_2109 PF01820 D-ala D-ala ligase N-terminus CYB_2109 PF07478 D-ala D-ala ligase C-terminus CYB_2110 PF00091 Tubulin/FtsZ family, GTPase domain CYB_2110 PF12327 FtsZ family, C-terminal domain CYB_2111 PF04115 Ureidoglycolate hydrolase CYB_2112 PF02350 UDP-N-acetylglucosamine 2-epimerase CYB_2114 PF00571 CBS domain CYB_2114 PF01769 Divalent cation transporter CYB_2114 PF03448 MgtE intracellular N domain CYB_2116 PF02308 CYB_2116 CYB_2117 PF01385 CYB_2117 CYB_2117 PF07282 CYB_2117 CYB_2118 PF01169 CYB_2118 CYB_2119 PF02021 Uncharacterised protein family UPF0102 CYB_2120 PF05991 CYB_2120 CYB_2122 PF08241 Methyltransferase domain CYB_2123 PF00483 Nucleotidyl transferase CYB_2124 PF00497 Bacterial extracellular solute-binding proteins, family 3 CYB_2125 PF00528 Binding-protein-dependent transport system inner membrane component CYB_2126 PF01385 CYB_2126 CYB_2126 PF07282 CYB_2126 CYB_2127 PF00890 FAD binding domain CYB_2127 PF02910 Fumarate reductase flavoprotein C-term CYB_2128 PF00202 Aminotransferase class-III CYB_2131 PF00156 Phosphoribosyl transferase domain CYB_2131 PF13522 Glutamine amidotransferase domain CYB_2132 PF01327 Polypeptide deformylase CYB_2133 PF04134 CYB_2133 CYB_2134 PF00805 Pentapeptide repeats (8 copies) CYB_2136 PF05120 CYB_2136 CYB_2138 PF12527 CYB_2138 CYB_2139 PF05670 CYB_2139 CYB_2139 PF05833 Fibronectin-binding protein A N-terminus (FbpA) CYB_2140 PF00207 Alpha-2-macroglobulin family CYB_2140 PF01835 MG2 domain CYB_2140 PF07703 Alpha-2-macroglobulin family N-terminal region CYB_2140 PF10569 Alpha-macro-globulin thiol-ester bond-forming region CYB_2140 PF13620 Carboxypeptidase regulatory-like domain CYB_2141 PF00482 Type II secretion system (T2SS), protein F CYB_2142 PF00437 Type II/IV secretion system protein CYB_2143 PF00437 Type II/IV secretion system protein CYB_2143 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CYB_2144 PF00205 Thiamine pyrophosphate enzyme, central domain CYB_2144 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CYB_2144 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CYB_2145 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CYB_2145 PF13378 Enolase C-terminal domain-like CYB_2146 PF07755 Protein of unknown function (DUF1611) CYB_2146 PF17396 CYB_2146 CYB_2147 PF01385 CYB_2147 CYB_2147 PF07282 CYB_2147 CYB_2148 PF09835 CYB_2148 CYB_2149 PF00557 Metallopeptidase family M24 CYB_2150 PF00571 CBS domain CYB_2150 PF00654 Voltage gated chloride channel CYB_2151 PF00730 HhH-GPD superfamily base excision DNA repair protein CYB_2152 PF03033 Glycosyltransferase family 28 N-terminal domain CYB_2152 PF04101 Glycosyltransferase family 28 C-terminal domain CYB_2153 PF14870 Photosynthesis system II assembly factor YCF48 CYB_2154 PF00301 Rubredoxin CYB_2155 PF00498 FHA domain CYB_2157 PF00121 Triosephosphate isomerase CYB_2158 PF00128 Alpha amylase, catalytic domain CYB_2160 PF01435 Peptidase family M48 CYB_2161 PF00005 ABC transporter CYB_2161 PF00664 ABC transporter transmembrane region CYB_2162 PF00294 pfkB family carbohydrate kinase CYB_2163 PF00990 GGDEF domain CYB_2163 PF01590 GAF domain CYB_2163 PF08448 PAS fold CYB_2163 PF13426 PAS domain CYB_2165 PF00056 lactate/malate dehydrogenase, NAD binding domain CYB_2165 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CYB_2166 PF02390 Putative methyltransferase CYB_2167 PF02517 CAAX protease self-immunity CYB_2168 PF00226 DnaJ domain CYB_2169 PF00497 Bacterial extracellular solute-binding proteins, family 3 CYB_2170 PF00459 Inositol monophosphatase family CYB_2171 PF00498 FHA domain CYB_2173 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CYB_2173 PF07685 CobB/CobQ-like glutamine amidotransferase domain CYB_2174 PF01385 CYB_2174 CYB_2174 PF07282 CYB_2174 CYB_2174 PF12323 CYB_2174 CYB_2175 PF02754 CYB_2175 CYB_2175 PF13183 4Fe-4S dicluster domain CYB_2176 PF13432 Tetratricopeptide repeat CYB_2177 PF08484 C-methyltransferase C-terminal domain CYB_2177 PF13489 Methyltransferase domain CYB_2179 PF04055 Radical SAM superfamily CYB_2179 PF13186 Iron-sulfur cluster-binding domain CYB_2181 PF00501 AMP-binding enzyme CYB_2183 PF03009 Glycerophosphoryl diester phosphodiesterase family CYB_2184 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) CYB_2186 PF00578 AhpC/TSA family CYB_2187 PF00583 Acetyltransferase (GNAT) family CYB_2189 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CYB_2190 PF01740 STAS domain CYB_2191 PF04357 CYB_2191 CYB_2192 PF06967 CYB_2192 CYB_2193 PF00148 Nitrogenase component 1 type Oxidoreductase CYB_2193 PF08369 Proto-chlorophyllide reductase 57 kD subunit CYB_2194 PF01370 NAD dependent epimerase/dehydratase family CYB_2195 PF03091 CutA1 divalent ion tolerance protein CYB_2196 PF01467 Cytidylyltransferase CYB_2197 PF00805 Pentapeptide repeats (8 copies) CYB_2198 PF11533 Protein of unknown function (DUF3225) CYB_2199 PF00365 Phosphofructokinase CYB_2200 PF00211 Adenylate and Guanylate cyclase catalytic domain CYB_2200 PF00498 FHA domain CYB_2201 PF06799 CYB_2201 CYB_2202 PF01687 Riboflavin kinase CYB_2202 PF06574 FAD synthetase CYB_2203 PF02391 MoaE protein CYB_2204 PF02654 CYB_2204 CYB_2206 PF00140 Sigma-70 factor, region 1 CYB_2206 PF04539 Sigma-70 region 3 CYB_2206 PF04542 Sigma-70 region 2 CYB_2206 PF04545 Sigma-70, region 4 CYB_2208 PF00809 Pterin binding enzyme CYB_2208 PF02310 B12 binding domain CYB_2208 PF02574 Homocysteine S-methyltransferase CYB_2208 PF02607 B12 binding domain CYB_2208 PF02965 Vitamin B12 dependent methionine synthase, activation domain CYB_2209 PF00528 Binding-protein-dependent transport system inner membrane component CYB_2211 PF00502 Phycobilisome protein CYB_2212 PF01509 TruB family pseudouridylate synthase (N terminal domain) CYB_2212 PF09157 Pseudouridine synthase II TruB, C-terminal CYB_2212 PF16198 CYB_2212 CYB_2213 PF00892 EamA-like transporter family CYB_2214 PF00579 tRNA synthetases class I (W and Y) CYB_2215 PF12095 Protein of unknown function (DUF3571) CYB_2216 PF00515 Tetratricopeptide repeat CYB_2216 PF13176 Tetratricopeptide repeat CYB_2217 PF02686 Glu-tRNAGln amidotransferase C subunit CYB_2220 PF13545 Crp-like helix-turn-helix domain CYB_2222 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CYB_2224 PF07282 CYB_2224 CYB_2225 PF02321 Outer membrane efflux protein CYB_2227 PF00270 DEAD/DEAH box helicase CYB_2227 PF00271 Helicase conserved C-terminal domain CYB_2228 PF12732 CYB_2228 CYB_2229 PF09334 tRNA synthetases class I (M) CYB_2231 PF12831 FAD dependent oxidoreductase CYB_2233 PF05673 Protein of unknown function (DUF815) CYB_2234 PF01968 Hydantoinase/oxoprolinase CYB_2234 PF05378 CYB_2234 CYB_2236 PF01479 S4 domain CYB_2237 PF01040 UbiA prenyltransferase family CYB_2238 PF02620 CYB_2238 CYB_2239 PF01424 R3H domain CYB_2241 PF02096 60Kd inner membrane protein CYB_2243 PF00719 Inorganic pyrophosphatase CYB_2244 PF04055 Radical SAM superfamily CYB_2245 PF08529 NusA N-terminal domain CYB_2245 PF13184 NusA-like KH domain CYB_2246 PF02576 Uncharacterised BCR, YhbC family COG0779 CYB_2246 PF17384 CYB_2246 CYB_2248 PF09654 CYB_2248 CYB_2249 PF13586 CYB_2249 CYB_2250 PF13340 CYB_2250 CYB_2251 PF08241 Methyltransferase domain CYB_2252 PF00491 Arginase family CYB_2253 PF02531 PsaD CYB_2254 PF00578 AhpC/TSA family CYB_2254 PF10417 C-terminal domain of 1-Cys peroxiredoxin CYB_2256 PF08865 CYB_2256 CYB_2257 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CYB_2258 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CYB_2258 PF01488 Shikimate / quinate 5-dehydrogenase CYB_2258 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CYB_2259 PF05969 Photosystem II complex subunit Ycf12 CYB_2260 PF00009 Elongation factor Tu GTP binding domain CYB_2260 PF00679 Elongation factor G C-terminus CYB_2260 PF03144 Elongation factor Tu domain 2 CYB_2261 PF01435 Peptidase family M48 CYB_2262 PF00994 Probable molybdopterin binding domain CYB_2262 PF02464 Competence-damaged protein CYB_2263 PF01385 CYB_2263 CYB_2263 PF07282 CYB_2263 CYB_2263 PF12323 CYB_2263 CYB_2264 PF00582 Universal stress protein family CYB_2266 PF00421 Photosystem II protein CYB_2266 PF02605 Photosystem I reaction centre subunit XI CYB_2267 PF00258 Flavodoxin CYB_2268 PF00421 Photosystem II protein CYB_2269 PF09375 Imelysin CYB_2270 PF13640 2OG-Fe(II) oxygenase superfamily CYB_2271 PF06537 CYB_2271 CYB_2272 PF07883 Cupin domain CYB_2273 PF09335 CYB_2273 CYB_2274 PF13847 Methyltransferase domain CYB_2275 PF11866 CYB_2275 CYB_2276 PF01119 DNA mismatch repair protein, C-terminal domain CYB_2276 PF08676 MutL C terminal dimerisation domain CYB_2276 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYB_2277 PF00072 Response regulator receiver domain CYB_2277 PF00990 GGDEF domain CYB_2278 PF07884 Vitamin K epoxide reductase family CYB_2279 PF03437 BtpA family CYB_2280 PF01180 Dihydroorotate dehydrogenase CYB_2281 PF04932 CYB_2281 CYB_2282 PF00111 2Fe-2S iron-sulfur cluster binding domain CYB_2283 PF01050 Mannose-6-phosphate isomerase CYB_2284 PF01435 Peptidase family M48 CYB_2285 PF01475 Ferric uptake regulator family CYB_2287 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CYB_2289 PF01169 CYB_2289 CYB_2290 PF01169 CYB_2290 CYB_2292 PF00696 Amino acid kinase family CYB_2293 PF02618 YceG-like family CYB_2294 PF13242 HAD-hyrolase-like CYB_2296 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYB_2296 PF03466 LysR substrate binding domain CYB_2297 PF12697 Alpha/beta hydrolase family CYB_2298 PF00291 Pyridoxal-phosphate dependent enzyme CYB_2299 PF00425 chorismate binding enzyme CYB_2300 PF01040 UbiA prenyltransferase family CYB_2301 PF03968 OstA-like protein CYB_2302 PF03739 CYB_2302 CYB_2304 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CYB_2304 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CYB_2304 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CYB_2305 PF07690 Major Facilitator Superfamily CYB_2306 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CYB_2306 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CYB_2307 PF09991 CYB_2307 CYB_2308 PF01192 RNA polymerase Rpb6 CYB_2309 PF00924 Mechanosensitive ion channel CYB_2310 PF01699 Sodium/calcium exchanger protein CYB_2312 PF07282 CYB_2312 CYB_2313 PF01385 CYB_2313 CYB_2313 PF12323 CYB_2313 CYB_2315 PF00291 Pyridoxal-phosphate dependent enzyme CYB_2316 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CYB_2317 PF01553 Acyltransferase CYB_2318 PF00702 haloacid dehalogenase-like hydrolase CYB_2319 PF12146 Putative lysophospholipase CYB_2320 PF02562 PhoH-like protein CYB_2327 PF13581 Histidine kinase-like ATPase domain CYB_2328 PF01266 FAD dependent oxidoreductase CYB_2329 PF00691 OmpA family CYB_2330 PF00717 Peptidase S24-like CYB_2330 PF01381 Helix-turn-helix CYB_2332 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CYB_2333 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CYB_2334 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CYB_2336 PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase CYB_2338 PF00933 Glycosyl hydrolase family 3 N terminal domain CYB_2339 PF00698 Acyl transferase domain CYB_2340 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CYB_2340 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CYB_2341 PF02504 Fatty acid synthesis protein CYB_2343 PF00218 Indole-3-glycerol phosphate synthase CYB_2344 PF17275 CYB_2344 CYB_2345 PF00403 Heavy-metal-associated domain CYB_2346 PF00122 E1-E2 ATPase CYB_2346 PF00403 Heavy-metal-associated domain CYB_2346 PF00702 haloacid dehalogenase-like hydrolase CYB_2347 PF01903 CbiX CYB_2348 PF04755 CYB_2348 CYB_2350 PF01300 Telomere recombination CYB_2352 PF01018 GTP1/OBG CYB_2352 PF01926 50S ribosome-binding GTPase CYB_2353 PF00575 S1 RNA binding domain CYB_2356 PF02492 CobW/HypB/UreG, nucleotide-binding domain CYB_2356 PF07683 Cobalamin synthesis protein cobW C-terminal domain CYB_2357 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CYB_2358 PF01131 DNA topoisomerase CYB_2358 PF01751 Toprim domain CYB_2358 PF13368 CYB_2358 CYB_2360 PF08486 CYB_2360 CYB_2361 PF02310 B12 binding domain CYB_2361 PF04055 Radical SAM superfamily CYB_2361 PF13282 CYB_2361 CYB_2362 PF04020 CYB_2362 CYB_2363 PF01722 BolA-like protein CYB_2364 PF00462 Glutaredoxin CYB_2365 PF01758 Sodium Bile acid symporter family CYB_2366 PF01451 Low molecular weight phosphotyrosine protein phosphatase CYB_2367 PF00801 PKD domain CYB_2368 PF01171 PP-loop family CYB_2369 PF01628 HrcA protein C terminal domain CYB_2369 PF08220 DeoR-like helix-turn-helix domain CYB_2370 PF00547 Urease, gamma subunit CYB_2373 PF00488 MutS domain V CYB_2373 PF01713 Smr domain CYB_2374 PF09383 NIL domain CYB_2374 PF14697 4Fe-4S dicluster domain CYB_2375 PF10716 CYB_2375 CYB_2376 PF11460 CYB_2376 CYB_2378 PF01513 ATP-NAD kinase CYB_2380 PF00805 Pentapeptide repeats (8 copies) CYB_2383 PF00005 ABC transporter CYB_2384 PF00224 Pyruvate kinase, barrel domain CYB_2385 PF03739 CYB_2385 CYB_2387 PF14559 Tetratricopeptide repeat CYB_2389 PF14681 Uracil phosphoribosyltransferase CYB_2391 PF09084 NMT1/THI5 like CYB_2393 PF01266 FAD dependent oxidoreductase CYB_2394 PF02597 ThiS family CYB_2395 PF05690 Thiazole biosynthesis protein ThiG CYB_2396 PF13649 Methyltransferase domain CYB_2397 PF13398 Peptidase M50B-like CYB_2399 PF13439 Glycosyltransferase Family 4 CYB_2399 PF13692 Glycosyl transferases group 1 CYB_2400 PF00005 ABC transporter CYB_2402 PF01066 CDP-alcohol phosphatidyltransferase CYB_2403 PF08241 Methyltransferase domain CYB_2404 PF03167 Uracil DNA glycosylase superfamily CYB_2405 PF01523 Putative modulator of DNA gyrase CYB_2407 PF13340 CYB_2407 CYB_2408 PF13586 CYB_2408 CYB_2409 PF14261 CYB_2409 CYB_2410 PF01385 CYB_2410 CYB_2410 PF07282 CYB_2410 CYB_2411 PF01523 Putative modulator of DNA gyrase CYB_2412 PF13483 Beta-lactamase superfamily domain CYB_2413 PF10184 CYB_2413 CYB_2416 PF00270 DEAD/DEAH box helicase CYB_2416 PF00271 Helicase conserved C-terminal domain CYB_2416 PF08148 DSHCT (NUC185) domain CYB_2417 PF00117 Glutamine amidotransferase class-I CYB_2418 PF13483 Beta-lactamase superfamily domain CYB_2419 PF12796 Ankyrin repeats (3 copies) CYB_2420 PF01916 Deoxyhypusine synthase CYB_2421 PF00512 His Kinase A (phospho-acceptor) domain CYB_2421 PF00672 HAMP domain CYB_2421 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYB_2421 PF08448 PAS fold CYB_2422 PF13548 CYB_2422 CYB_2424 PF00571 CBS domain CYB_2424 PF01595 CYB_2424 CYB_2425 PF02224 Cytidylate kinase CYB_2425 PF02569 Pantoate-beta-alanine ligase CYB_2426 PF02529 Cytochrome B6-F complex subunit 5 CYB_2427 PF00226 DnaJ domain CYB_2428 PF00501 AMP-binding enzyme CYB_2428 PF13193 AMP-binding enzyme C-terminal domain CYB_2430 PF00023 Ankyrin repeat CYB_2430 PF12796 Ankyrin repeats (3 copies) CYB_2431 PF09988 CYB_2431 CYB_2432 PF02558 Ketopantoate reductase PanE/ApbA CYB_2432 PF08546 Ketopantoate reductase PanE/ApbA C terminal CYB_2433 PF00156 Phosphoribosyl transferase domain CYB_2434 PF00805 Pentapeptide repeats (8 copies) CYB_2435 PF01126 Heme oxygenase CYB_2436 PF00562 RNA polymerase Rpb2, domain 6 CYB_2436 PF04560 RNA polymerase Rpb2, domain 7 CYB_2436 PF04561 RNA polymerase Rpb2, domain 2 CYB_2436 PF04563 RNA polymerase beta subunit CYB_2436 PF04565 RNA polymerase Rpb2, domain 3 CYB_2436 PF10385 RNA polymerase beta subunit external 1 domain CYB_2437 PF00623 RNA polymerase Rpb1, domain 2 CYB_2437 PF04983 RNA polymerase Rpb1, domain 3 CYB_2437 PF04997 RNA polymerase Rpb1, domain 1 CYB_2438 PF04983 RNA polymerase Rpb1, domain 3 CYB_2438 PF04998 RNA polymerase Rpb1, domain 5 CYB_2438 PF05000 RNA polymerase Rpb1, domain 4 CYB_2439 PF03070 TENA/THI-4/PQQC family CYB_2440 PF03167 Uracil DNA glycosylase superfamily CYB_2441 PF01488 Shikimate / quinate 5-dehydrogenase CYB_2442 PF11266 Protein of unknown function (DUF3066) CYB_2444 PF00805 Pentapeptide repeats (8 copies) CYB_2446 PF00005 ABC transporter CYB_2447 PF00551 Formyl transferase CYB_2447 PF01842 ACT domain CYB_2449 PF02416 mttA/Hcf106 family CYB_2451 PF01043 SecA preprotein cross-linking domain CYB_2451 PF07516 SecA Wing and Scaffold domain CYB_2451 PF07517 SecA DEAD-like domain CYB_2452 PF01370 NAD dependent epimerase/dehydratase family CYB_2452 PF08338 Domain of unknown function (DUF1731) CYB_2454 PF01385 CYB_2454 CYB_2454 PF07282 CYB_2454 CYB_2456 PF00490 Delta-aminolevulinic acid dehydratase CYB_2457 PF12146 Putative lysophospholipase CYB_2458 PF02532 Photosystem II reaction centre I protein (PSII 4 CYB_2460 PF02632 BioY family CYB_2461 PF00578 AhpC/TSA family CYB_2462 PF00459 Inositol monophosphatase family CYB_2464 PF01026 TatD related DNase CYB_2465 PF00360 Phytochrome region CYB_2465 PF00512 His Kinase A (phospho-acceptor) domain CYB_2465 PF01590 GAF domain CYB_2465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYB_2466 PF03745 Domain of unknown function (DUF309) CYB_2468 PF01385 CYB_2468 CYB_2468 PF07282 CYB_2468 CYB_2470 PF03364 Polyketide cyclase / dehydrase and lipid transport CYB_2471 PF00512 His Kinase A (phospho-acceptor) domain CYB_2471 PF01590 GAF domain CYB_2471 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYB_2471 PF10069 CYB_2471 CYB_2471 PF17150 CYB_2471 CYB_2472 PF13239 CYB_2472 CYB_2474 PF13340 CYB_2474 CYB_2475 PF13586 CYB_2475 CYB_2477 PF13416 Bacterial extracellular solute-binding protein CYB_2478 PF00528 Binding-protein-dependent transport system inner membrane component CYB_2479 PF00805 Pentapeptide repeats (8 copies) CYB_2480 PF00890 FAD binding domain CYB_2480 PF02910 Fumarate reductase flavoprotein C-term CYB_2481 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CYB_2481 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CYB_2482 PF02445 Quinolinate synthetase A protein CYB_2483 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CYB_2483 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CYB_2484 PF01385 CYB_2484 CYB_2484 PF12323 CYB_2484 CYB_2485 PF07282 CYB_2485 CYB_2488 PF00515 Tetratricopeptide repeat CYB_2488 PF07719 Tetratricopeptide repeat CYB_2488 PF13414 TPR repeat CYB_2488 PF13432 Tetratricopeptide repeat CYB_2489 PF04539 Sigma-70 region 3 CYB_2489 PF04542 Sigma-70 region 2 CYB_2489 PF08281 Sigma-70, region 4 CYB_2491 PF13847 Methyltransferase domain CYB_2492 PF06723 MreB/Mbl protein CYB_2493 PF04085 rod shape-determining protein MreC CYB_2494 PF04093 CYB_2494 CYB_2496 PF12838 4Fe-4S dicluster domain CYB_2498 PF03186 CYB_2498 CYB_2499 PF02082 Transcriptional regulator CYB_2500 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CYB_2501 PF00072 Response regulator receiver domain CYB_2501 PF00486 Transcriptional regulatory protein, C terminal CYB_2502 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CYB_2502 PF02874 ATP synthase alpha/beta family, beta-barrel domain CYB_2503 PF10646 CYB_2503 CYB_2505 PF02405 CYB_2505 CYB_2506 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CYB_2507 PF13085 2Fe-2S iron-sulfur cluster binding domain CYB_2507 PF13183 4Fe-4S dicluster domain CYB_2508 PF00092 von Willebrand factor type A domain CYB_2511 PF00579 tRNA synthetases class I (W and Y) CYB_2511 PF01479 S4 domain CYB_2512 PF00905 Penicillin binding protein transpeptidase domain CYB_2512 PF00912 Transglycosylase CYB_2514 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CYB_2514 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CYB_2515 PF00069 Protein kinase domain CYB_2516 PF00582 Universal stress protein family CYB_2516 PF00999 Sodium/hydrogen exchanger family CYB_2517 PF02092 CYB_2517 CYB_2518 PF03881 Fructosamine kinase CYB_2519 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CYB_2520 PF01047 MarR family CYB_2521 PF01385 CYB_2521 CYB_2521 PF07282 CYB_2521 CYB_2522 PF01979 Amidohydrolase family CYB_2524 PF00004 ATPase family associated with various cellular activities (AAA) CYB_2524 PF02861 Clp amino terminal domain CYB_2524 PF07724 AAA domain (Cdc48 subfamily) CYB_2524 PF10431 C-terminal, D2-small domain, of ClpB protein CYB_2525 PF00575 S1 RNA binding domain CYB_2525 PF00773 RNB domain CYB_2525 PF08206 Ribonuclease B OB domain CYB_2526 PF01895 PhoU domain CYB_2528 PF07005 Protein of unknown function, DUF1537 CYB_2528 PF17042 CYB_2528 CYB_2529 PF00128 Alpha amylase, catalytic domain CYB_2529 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CYB_2529 PF11941 Domain of unknown function (DUF3459) CYB_2531 PF00113 Enolase, C-terminal TIM barrel domain CYB_2531 PF03952 Enolase, N-terminal domain CYB_2532 PF00326 Prolyl oligopeptidase family CYB_2532 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CYB_2533 PF00027 Cyclic nucleotide-binding domain CYB_2533 PF13545 Crp-like helix-turn-helix domain CYB_2534 PF05299 M61 glycyl aminopeptidase CYB_2534 PF13180 PDZ domain CYB_2537 PF14495 Cytochrome c-550 domain CYB_2538 PF01385 CYB_2538 CYB_2538 PF07282 CYB_2538 CYB_2539 PF14495 Cytochrome c-550 domain CYB_2540 PF01730 UreF CYB_2541 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CYB_2541 PF16321 CYB_2541 CYB_2542 PF06838 Methionine gamma-lyase CYB_2545 PF01155 Hydrogenase expression/synthesis hypA family CYB_2546 PF03647 Transmembrane proteins 14C CYB_2548 PF01960 ArgJ family CYB_2549 PF00005 ABC transporter CYB_2550 PF00528 Binding-protein-dependent transport system inner membrane component CYB_2551 PF12849 PBP superfamily domain CYB_2552 PF00773 RNB domain CYB_2553 PF00072 Response regulator receiver domain CYB_2553 PF00196 Bacterial regulatory proteins, luxR family CYB_2555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYB_2555 PF03466 LysR substrate binding domain CYB_2557 PF01385 CYB_2557 CYB_2557 PF07282 CYB_2557 CYB_2558 PF01791 DeoC/LacD family aldolase CYB_2559 PF02565 Recombination protein O C terminal CYB_2559 PF11967 Recombination protein O N terminal CYB_2560 PF13181 Tetratricopeptide repeat CYB_2560 PF13424 Tetratricopeptide repeat CYB_2560 PF13432 Tetratricopeptide repeat CYB_2561 PF00072 Response regulator receiver domain CYB_2561 PF00486 Transcriptional regulatory protein, C terminal CYB_2562 PF10929 CYB_2562 CYB_2564 PF01872 RibD C-terminal domain CYB_2568 PF02617 ATP-dependent Clp protease adaptor protein ClpS CYB_2569 PF08855 CYB_2569 CYB_2570 PF01475 Ferric uptake regulator family CYB_2571 PF05145 CYB_2571 CYB_2572 PF00226 DnaJ domain CYB_2572 PF13767 CYB_2572 CYB_2573 PF01947 Protein of unknown function (DUF98) CYB_2574 PF04055 Radical SAM superfamily CYB_2575 PF00069 Protein kinase domain CYB_2576 PF01940 CYB_2576 CYB_2577 PF00101 Ribulose bisphosphate carboxylase, small chain CYB_2578 PF02341 RbcX protein CYB_2579 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain CYB_2579 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain CYB_2581 PF00574 Clp protease CYB_2585 PF08844 CYB_2585 CYB_2586 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CYB_2586 PF07685 CobB/CobQ-like glutamine amidotransferase domain CYB_2587 PF07958 CYB_2587 CYB_2588 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CYB_2590 PF00438 S-adenosylmethionine synthetase, N-terminal domain CYB_2590 PF02772 S-adenosylmethionine synthetase, central domain CYB_2590 PF02773 S-adenosylmethionine synthetase, C-terminal domain CYB_2591 PF13586 CYB_2591 CYB_2592 PF13340 CYB_2592 CYB_2593 PF00994 Probable molybdopterin binding domain CYB_2597 PF00297 Ribosomal protein L3 CYB_2598 PF00573 Ribosomal protein L4/L1 family CYB_2599 PF00276 Ribosomal protein L23 CYB_2600 PF00181 Ribosomal Proteins L2, RNA binding domain CYB_2600 PF03947 Ribosomal Proteins L2, C-terminal domain CYB_2601 PF00203 Ribosomal protein S19 CYB_2602 PF00237 Ribosomal protein L22p/L17e CYB_2603 PF00189 Ribosomal protein S3, C-terminal domain CYB_2603 PF07650 KH domain CYB_2604 PF00252 Ribosomal protein L16p/L10e CYB_2605 PF00831 Ribosomal L29 protein CYB_2606 PF00366 Ribosomal protein S17 CYB_2607 PF00238 Ribosomal protein L14p/L23e CYB_2608 PF00467 KOW motif CYB_2608 PF17136 CYB_2608 CYB_2609 PF00281 Ribosomal protein L5 CYB_2609 PF00673 ribosomal L5P family C-terminus CYB_2610 PF00410 Ribosomal protein S8 CYB_2611 PF00347 Ribosomal protein L6 CYB_2612 PF00861 Ribosomal L18p/L5e family CYB_2613 PF00333 Ribosomal protein S5, N-terminal domain CYB_2613 PF03719 Ribosomal protein S5, C-terminal domain CYB_2614 PF00828 Ribosomal protein L18e/L15 CYB_2615 PF00344 SecY translocase CYB_2616 PF00406 Adenylate kinase CYB_2617 PF00557 Metallopeptidase family M24 CYB_2618 PF01176 Translation initiation factor 1A / IF-1 CYB_2619 PF12697 Alpha/beta hydrolase family CYB_2621 PF05239 PRC-barrel domain CYB_2622 PF00534 Glycosyl transferases group 1 CYB_2623 PF00355 Rieske [2Fe-2S] domain CYB_2624 PF05685 Putative restriction endonuclease CYB_2625 PF01424 R3H domain CYB_2625 PF13604 AAA domain CYB_2626 PF00037 4Fe-4S binding domain CYB_2626 PF12617 CYB_2626 CYB_2627 PF11909 CYB_2627 CYB_2628 PF01641 SelR domain CYB_2629 PF03239 CYB_2629 CYB_2630 PF02672 CP12 domain CYB_2631 PF00005 ABC transporter CYB_2633 PF01124 MAPEG family CYB_2634 PF09851 CYB_2634 CYB_2635 PF00132 Bacterial transferase hexapeptide (six repeats) CYB_2635 PF03479 Domain of unknown function (DUF296) CYB_2635 PF12804 MobA-like NTP transferase domain CYB_2638 PF13340 CYB_2638 CYB_2639 PF13586 CYB_2639 CYB_2640 PF07282 CYB_2640 CYB_2641 PF00805 Pentapeptide repeats (8 copies) CYB_2642 PF06305 CYB_2642 CYB_2643 PF02401 LytB protein CYB_2645 PF03547 CYB_2645 CYB_2647 PF01571 Aminomethyltransferase folate-binding domain CYB_2647 PF08669 Glycine cleavage T-protein C-terminal barrel domain CYB_2648 PF14279 CYB_2648 CYB_2649 PF08872 CYB_2649 CYB_2650 PF00350 Dynamin family CYB_2652 PF00027 Cyclic nucleotide-binding domain CYB_2652 PF13545 Crp-like helix-turn-helix domain CYB_2654 PF01636 Phosphotransferase enzyme family CYB_2654 PF13671 AAA domain CYB_2656 PF08240 Alcohol dehydrogenase GroES-like domain CYB_2656 PF13602 Zinc-binding dehydrogenase CYB_2657 PF01385 CYB_2657 CYB_2657 PF07282 CYB_2657 CYB_2659 PF01425 Amidase CYB_2660 PF13318 CYB_2660 CYB_2661 PF01814 Hemerythrin HHE cation binding domain CYB_2662 PF13340 CYB_2662 CYB_2663 PF13586 CYB_2663 CYB_2664 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CYB_2665 PF01039 Carboxyl transferase domain CYB_2666 PF01740 STAS domain CYB_2667 PF08241 Methyltransferase domain CYB_2668 PF02080 TrkA-C domain CYB_2668 PF02254 TrkA-N domain CYB_2669 PF13343 Bacterial extracellular solute-binding protein CYB_2671 PF00528 Binding-protein-dependent transport system inner membrane component CYB_2672 PF00231 ATP synthase CYB_2673 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CYB_2673 PF00306 ATP synthase alpha/beta chain, C terminal domain CYB_2673 PF02874 ATP synthase alpha/beta family, beta-barrel domain CYB_2674 PF00213 ATP synthase delta (OSCP) subunit CYB_2675 PF00430 ATP synthase B/B' CF(0) CYB_2676 PF00430 ATP synthase B/B' CF(0) CYB_2677 PF00137 ATP synthase subunit C CYB_2679 PF00119 ATP synthase A chain CYB_2680 PF12966 CYB_2680 CYB_2682 PF11375 CYB_2682 CYB_2684 PF01676 Metalloenzyme superfamily CYB_2684 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CYB_2685 PF13181 Tetratricopeptide repeat CYB_2685 PF13432 Tetratricopeptide repeat CYB_2686 PF00210 Ferritin-like domain CYB_2687 PF01926 50S ribosome-binding GTPase CYB_2687 PF10396 GTP-binding protein TrmE N-terminus CYB_2687 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE CYB_2688 PF00343 Carbohydrate phosphorylase CYB_2688 PF11897 CYB_2688 CYB_2689 PF00072 Response regulator receiver domain CYB_2689 PF00486 Transcriptional regulatory protein, C terminal CYB_2690 PF13181 Tetratricopeptide repeat CYB_2690 PF13414 TPR repeat CYB_2690 PF13432 Tetratricopeptide repeat CYB_2691 PF01070 FMN-dependent dehydrogenase CYB_2694 PF04536 TLP18 CYB_2695 PF01565 FAD binding domain CYB_2696 PF01385 CYB_2696 CYB_2696 PF07282 CYB_2696 CYB_2696 PF12323 CYB_2696 CYB_2697 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CYB_2697 PF02790 Cytochrome C oxidase subunit II, transmembrane domain CYB_2698 PF00115 Cytochrome C and Quinol oxidase polypeptide I CYB_2699 PF06144 DNA polymerase III, delta subunit CYB_2700 PF00510 Cytochrome c oxidase subunit III CYB_2701 PF01385 CYB_2701 CYB_2701 PF07282 CYB_2701 CYB_2703 PF04932 CYB_2703 CYB_2704 PF00543 Nitrogen regulatory protein P-II CYB_2705 PF00909 Ammonium Transporter Family CYB_2706 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CYB_2707 PF01385 CYB_2707 CYB_2707 PF07282 CYB_2707 CYB_2708 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CYB_2709 PF00515 Tetratricopeptide repeat CYB_2709 PF13414 TPR repeat CYB_2709 PF13432 Tetratricopeptide repeat CYB_2710 PF00581 Rhodanese-like domain CYB_2711 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYB_2712 PF01592 NifU-like N terminal domain CYB_2713 PF01722 BolA-like protein CYB_2714 PF01385 CYB_2714 CYB_2714 PF07282 CYB_2714 CYB_2714 PF12323 CYB_2714 CYB_2715 PF02086 D12 class N6 adenine-specific DNA methyltransferase CYB_2716 PF08439 Oligopeptidase F CYB_2718 PF01078 Magnesium chelatase, subunit ChlI CYB_2718 PF13335 CYB_2718 CYB_2718 PF13541 Subunit ChlI of Mg-chelatase CYB_2719 PF02463 RecF/RecN/SMC N terminal domain CYB_2722 PF00512 His Kinase A (phospho-acceptor) domain CYB_2722 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYB_2723 PF00072 Response regulator receiver domain CYB_2723 PF00486 Transcriptional regulatory protein, C terminal CYB_2725 PF01497 Periplasmic binding protein CYB_2726 PF03544 Gram-negative bacterial TonB protein C-terminal CYB_2727 PF00593 TonB dependent receptor CYB_2727 PF07715 TonB-dependent Receptor Plug Domain CYB_2728 PF00005 ABC transporter CYB_2729 PF01032 FecCD transport family CYB_2731 PF00488 MutS domain V CYB_2731 PF01624 MutS domain I CYB_2731 PF05188 MutS domain II CYB_2731 PF05190 MutS family domain IV CYB_2731 PF05192 MutS domain III CYB_2732 PF12046 CYB_2732 CYB_2733 PF03023 CYB_2733 CYB_2734 PF00140 Sigma-70 factor, region 1 CYB_2734 PF04539 Sigma-70 region 3 CYB_2734 PF04542 Sigma-70 region 2 CYB_2734 PF04545 Sigma-70, region 4 CYB_2735 PF01385 CYB_2735 CYB_2735 PF07282 CYB_2735 CYB_2736 PF03130 PBS lyase HEAT-like repeat CYB_2736 PF13646 HEAT repeats CYB_2737 PF00427 Phycobilisome Linker polypeptide CYB_2737 PF01383 CpcD/allophycocyanin linker domain CYB_2738 PF00502 Phycobilisome protein CYB_2740 PF00502 Phycobilisome protein CYB_2741 PF06206 CpeT/CpcT family (DUF1001) CYB_2744 PF02171 Piwi domain CYB_2747 PF00293 NUDIX domain CYB_2748 PF00072 Response regulator receiver domain CYB_2749 PF00072 Response regulator receiver domain CYB_2750 PF01584 CheW-like domain CYB_2751 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CYB_2751 PF01590 GAF domain CYB_2752 PF00072 Response regulator receiver domain CYB_2752 PF01584 CheW-like domain CYB_2752 PF01627 Hpt domain CYB_2752 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYB_2752 PF02895 Signal transducing histidine kinase, homodimeric domain CYB_2755 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CYB_2756 PF12836 Helix-hairpin-helix motif CYB_2756 PF13091 PLD-like domain CYB_2757 PF02469 Fasciclin domain CYB_2759 PF01926 50S ribosome-binding GTPase CYB_2759 PF05128 CYB_2759 CYB_2760 PF03209 CYB_2760 CYB_2765 PF03372 Endonuclease/Exonuclease/phosphatase family CYB_2765 PF16409 CYB_2765 CYB_2767 PF01888 CbiD CYB_2769 PF01327 Polypeptide deformylase CYB_2770 PF12159 CYB_2770 CYB_2771 PF10693 CYB_2771 CYB_2772 PF04485 Phycobilisome degradation protein nblA CYB_2774 PF00076 RNA recognition motif CYB_2775 PF00149 Calcineurin-like phosphoesterase CYB_2776 PF04226 CYB_2776 CYB_2779 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CYB_2780 PF12849 PBP superfamily domain CYB_2781 PF00012 Hsp70 protein CYB_2782 PF00226 DnaJ domain CYB_2782 PF01556 DnaJ C terminal domain CYB_2783 PF00588 SpoU rRNA Methylase family CYB_2785 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CYB_2786 PF07977 FabA-like domain CYB_2787 PF00132 Bacterial transferase hexapeptide (six repeats) CYB_2787 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CYB_2788 PF01593 Flavin containing amine oxidoreductase CYB_2789 PF02684 CYB_2789 CYB_2790 PF13767 CYB_2790 CYB_2791 PF00512 His Kinase A (phospho-acceptor) domain CYB_2791 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYB_2792 PF11352 CYB_2792 CYB_2793 PF11344 CYB_2793 CYB_2794 PF01179 Copper amine oxidase, enzyme domain CYB_2794 PF02727 Copper amine oxidase, N2 domain CYB_2794 PF02728 Copper amine oxidase, N3 domain CYB_2795 PF00512 His Kinase A (phospho-acceptor) domain CYB_2795 PF01590 GAF domain CYB_2795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYB_2795 PF08447 PAS fold CYB_2795 PF08448 PAS fold CYB_2795 PF13185 GAF domain CYB_2798 PF01649 Ribosomal protein S20 CYB_2799 PF04055 Radical SAM superfamily CYB_2799 PF06463 Molybdenum Cofactor Synthesis C CYB_2799 PF13353 4Fe-4S single cluster domain CYB_2800 PF07593 CYB_2800 CYB_2800 PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella CYB_2801 PF00999 Sodium/hydrogen exchanger family CYB_2801 PF02254 TrkA-N domain CYB_2802 PF14105 CYB_2802 CYB_2804 PF00120 Glutamine synthetase, catalytic domain CYB_2804 PF03951 Glutamine synthetase, beta-Grasp domain CYB_2806 PF00085 Thioredoxin CYB_2806 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYB_2807 PF00586 AIR synthase related protein, N-terminal domain CYB_2807 PF02769 AIR synthase related protein, C-terminal domain CYB_2808 PF00270 DEAD/DEAH box helicase CYB_2808 PF00271 Helicase conserved C-terminal domain CYB_2808 PF17191 CYB_2808 CYB_2809 PF07465 Photosystem I protein M (PsaM) CYB_2810 PF00464 Serine hydroxymethyltransferase CYB_2811 PF00953 Glycosyl transferase family 4 CYB_2813 PF00156 Phosphoribosyl transferase domain CYB_2815 PF01436 NHL repeat CYB_2816 PF13529 Peptidase_C39 like family CYB_2817 PF02245 Methylpurine-DNA glycosylase (MPG) CYB_2818 PF02597 ThiS family CYB_2819 PF02469 Fasciclin domain CYB_2820 PF00291 Pyridoxal-phosphate dependent enzyme CYB_2822 PF00814 Glycoprotease family CYB_2823 PF01134 Glucose inhibited division protein A CYB_2823 PF13932 GidA associated domain 3 CYB_2824 PF02507 Photosystem I reaction centre subunit III CYB_2825 PF01701 Photosystem I reaction centre subunit IX / PsaJ CYB_2826 PF02605 Photosystem I reaction centre subunit XI CYB_2828 PF00636 Ribonuclease III domain CYB_2829 PF00588 SpoU rRNA Methylase family CYB_2829 PF08032 RNA 2'-O ribose methyltransferase substrate binding CYB_2830 PF08846 CYB_2830 CYB_2831 PF00111 2Fe-2S iron-sulfur cluster binding domain CYB_2833 PF08543 Phosphomethylpyrimidine kinase CYB_2834 PF14345 CYB_2834 CYB_2835 PF01385 CYB_2835 CYB_2835 PF07282 CYB_2835 CYB_2836 PF02230 Phospholipase/Carboxylesterase CYB_2837 PF01218 Coproporphyrinogen III oxidase CYB_2838 PF10718 CYB_2838 CYB_2841 PF09367 CpeS-like protein CYB_2844 PF02492 CobW/HypB/UreG, nucleotide-binding domain CYB_2845 PF00004 ATPase family associated with various cellular activities (AAA) CYB_2846 PF01565 FAD binding domain CYB_2846 PF02913 FAD linked oxidases, C-terminal domain CYB_2847 PF13489 Methyltransferase domain CYB_2848 PF01632 Ribosomal protein L35 CYB_2849 PF00453 Ribosomal protein L20 CYB_2850 PF00497 Bacterial extracellular solute-binding proteins, family 3 CYB_2851 PF01808 AICARFT/IMPCHase bienzyme CYB_2851 PF02142 MGS-like domain CYB_2852 PF00132 Bacterial transferase hexapeptide (six repeats) CYB_2854 PF01040 UbiA prenyltransferase family CYB_2855 PF01743 Poly A polymerase head domain CYB_2855 PF12627 Probable RNA and SrmB- binding site of polymerase A CYB_2855 PF13735 tRNA nucleotidyltransferase domain 2 putative CYB_2856 PF00072 Response regulator receiver domain CYB_2856 PF00486 Transcriptional regulatory protein, C terminal CYB_2857 PF00762 Ferrochelatase CYB_2859 PF16166 CYB_2859 CYB_2860 PF01967 MoaC family CYB_2862 PF04168 CYB_2862 CYB_2863 PF00132 Bacterial transferase hexapeptide (six repeats) CYB_2864 PF14403 CYB_2864 CYB_2865 PF13231 CYB_2865 CYB_2867 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CYB_2867 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CYB_2869 PF07883 Cupin domain CYB_2870 PF00857 Isochorismatase family CYB_2872 PF00583 Acetyltransferase (GNAT) family CYB_2873 PF01329 Pterin 4 alpha carbinolamine dehydratase CYB_2874 PF13460 NADH(P)-binding CYB_2875 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains CYB_2875 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CYB_2876 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains CYB_2877 PF10216 CYB_2877 CYB_2878 PF02469 Fasciclin domain CYB_2879 PF07452 CYB_2879 CYB_2880 PF01523 Putative modulator of DNA gyrase CYB_2881 PF00133 tRNA synthetases class I (I, L, M and V) CYB_2881 PF08264 Anticodon-binding domain of tRNA CYB_2881 PF13603 Leucyl-tRNA synthetase, Domain 2 CYB_2882 PF00175 Oxidoreductase NAD-binding domain CYB_2883 PF00485 Phosphoribulokinase / Uridine kinase family CYB_2885 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CYB_2887 PF13371 Tetratricopeptide repeat CYB_2887 PF13432 Tetratricopeptide repeat CYB_2889 PF01245 Ribosomal protein L19 CYB_2890 PF13533 Biotin-lipoyl like CYB_2890 PF16576 CYB_2890 CYB_2891 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CYB_2892 PF02687 CYB_2892 CYB_2892 PF12704 MacB-like periplasmic core domain CYB_2893 PF00528 Binding-protein-dependent transport system inner membrane component CYB_2894 PF02575 YbaB/EbfC DNA-binding family CYB_2895 PF02132 RecR protein CYB_2895 PF13662 Toprim domain CYB_2897 PF01765 Ribosome recycling factor CYB_2898 PF00571 CBS domain CYB_2898 PF01368 DHH family CYB_2898 PF01743 Poly A polymerase head domain CYB_2898 PF12627 Probable RNA and SrmB- binding site of polymerase A CYB_2900 PF01841 Transglutaminase-like superfamily CYB_2900 PF08379 CYB_2900 CYB_2901 PF03819 MazG nucleotide pyrophosphohydrolase domain CYB_2902 PF11347 CYB_2902 CYB_2903 PF13301 CYB_2903 CYB_2904 PF01926 50S ribosome-binding GTPase CYB_2905 PF04055 Radical SAM superfamily CYB_2909 PF13549 ATP-grasp domain CYB_2910 PF01385 CYB_2910 CYB_2910 PF07282 CYB_2910 CYB_2912 PF01220 Dehydroquinase class II CYB_2913 PF00561 alpha/beta hydrolase fold CYB_2914 PF00487 CYB_2914 CYB_2915 PF00085 Thioredoxin CYB_2916 PF01588 Putative tRNA binding domain CYB_2916 PF03147 Ferredoxin-fold anticodon binding domain CYB_2916 PF03483 B3/4 domain CYB_2916 PF03484 tRNA synthetase B5 domain CYB_2918 PF10128 CYB_2918 CYB_2919 PF00342 Phosphoglucose isomerase CYB_2920 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CYB_2921 PF02152 Dihydroneopterin aldolase CYB_2922 PF00809 Pterin binding enzyme CYB_2924 PF01926 50S ribosome-binding GTPase CYB_2924 PF06071 Protein of unknown function (DUF933) CYB_2925 PF01385 CYB_2925 CYB_2925 PF07282 CYB_2925 CYB_2925 PF12323 CYB_2925 CYB_2926 PF00072 Response regulator receiver domain CYB_2926 PF07228 Stage II sporulation protein E (SpoIIE) CYB_2928 PF00248 Aldo/keto reductase family CYB_2929 PF00395 S-layer homology domain CYB_2931 PF04286 CYB_2931 CYB_2932 PF00149 Calcineurin-like phosphoesterase CYB_2932 PF02872 5'-nucleotidase, C-terminal domain CYB_2933 PF01025 GrpE CYB_2934 PF00012 Hsp70 protein CYB_2935 PF00226 DnaJ domain CYB_2935 PF00684 DnaJ central domain CYB_2935 PF01556 DnaJ C terminal domain CYB_2936 PF01206 Sulfurtransferase TusA CYB_2937 PF03193 Protein of unknown function, DUF258 CYB_2938 PF05685 Putative restriction endonuclease CYB_2939 PF05685 Putative restriction endonuclease CYB_2940 PF02463 RecF/RecN/SMC N terminal domain CYB_2940 PF06470 SMC proteins Flexible Hinge Domain CYB_2941 PF00825 Ribonuclease P CYB_2942 PF00468 Ribosomal protein L34