CYA_0001 PF00308 Bacterial dnaA protein CYA_0001 PF08299 Bacterial dnaA protein helix-turn-helix CYA_0001 PF11638 DnaA N-terminal domain CYA_0002 PF08241 Methyltransferase domain CYA_0004 PF00004 ATPase family associated with various cellular activities (AAA) CYA_0004 PF01434 Peptidase family M41 CYA_0005 PF00106 short chain dehydrogenase CYA_0008 PF00521 DNA gyrase/topoisomerase IV, subunit A CYA_0008 PF03989 DNA gyrase C-terminal domain, beta-propeller CYA_0009 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CYA_0009 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CYA_0009 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CYA_0009 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CYA_0010 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CYA_0011 PF01964 ThiC family CYA_0013 PF09353 CYA_0013 CYA_0014 PF05419 GUN4-like CYA_0016 PF06386 CYA_0016 CYA_0017 PF01975 Survival protein SurE CYA_0018 PF11780 CYA_0018 CYA_0019 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CYA_0020 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CYA_0020 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CYA_0021 PF02152 Dihydroneopterin aldolase CYA_0022 PF00809 Pterin binding enzyme CYA_0024 PF01926 50S ribosome-binding GTPase CYA_0024 PF06071 Protein of unknown function (DUF933) CYA_0025 PF01938 TRAM domain CYA_0025 PF05958 tRNA (Uracil-5-)-methyltransferase CYA_0026 PF04932 CYA_0026 CYA_0027 PF00111 2Fe-2S iron-sulfur cluster binding domain CYA_0028 PF01050 Mannose-6-phosphate isomerase CYA_0029 PF01435 Peptidase family M48 CYA_0030 PF01475 Ferric uptake regulator family CYA_0032 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CYA_0034 PF01169 CYA_0034 CYA_0035 PF02605 Photosystem I reaction centre subunit XI CYA_0036 PF00796 Photosystem I reaction centre subunit VIII CYA_0037 PF13565 CYA_0037 CYA_0038 PF13358 DDE superfamily endonuclease CYA_0041 PF03209 CYA_0041 CYA_0042 PF00069 Protein kinase domain CYA_0042 PF00400 WD domain, G-beta repeat CYA_0043 PF01593 Flavin containing amine oxidoreductase CYA_0045 PF10110 CYA_0045 CYA_0046 PF03054 tRNA methyl transferase CYA_0047 PF03130 PBS lyase HEAT-like repeat CYA_0047 PF13646 HEAT repeats CYA_0050 PF13181 Tetratricopeptide repeat CYA_0051 PF00528 Binding-protein-dependent transport system inner membrane component CYA_0051 PF12911 CYA_0051 CYA_0053 PF13358 DDE superfamily endonuclease CYA_0053 PF13518 Helix-turn-helix domain CYA_0055 PF00586 AIR synthase related protein, N-terminal domain CYA_0055 PF02769 AIR synthase related protein, C-terminal domain CYA_0056 PF05768 Glutaredoxin-like domain (DUF836) CYA_0057 PF01336 OB-fold nucleic acid binding domain CYA_0057 PF02811 PHP domain CYA_0057 PF07733 Bacterial DNA polymerase III alpha subunit CYA_0057 PF14579 Helix-hairpin-helix motif CYA_0058 PF00795 Carbon-nitrogen hydrolase CYA_0059 PF10999 CYA_0059 CYA_0060 PF10099 CYA_0060 CYA_0061 PF04542 Sigma-70 region 2 CYA_0061 PF08281 Sigma-70, region 4 CYA_0062 PF14339 CYA_0062 CYA_0064 PF06182 CYA_0064 CYA_0065 PF13489 Methyltransferase domain CYA_0066 PF00498 FHA domain CYA_0068 PF01797 Transposase IS200 like CYA_0069 PF11237 CYA_0069 CYA_0070 PF14233 CYA_0070 CYA_0072 PF01494 FAD binding domain CYA_0074 PF02355 Protein export membrane protein CYA_0074 PF07549 SecD/SecF GG Motif CYA_0075 PF02355 Protein export membrane protein CYA_0075 PF07549 SecD/SecF GG Motif CYA_0076 PF12831 FAD dependent oxidoreductase CYA_0077 PF01225 Mur ligase family, catalytic domain CYA_0077 PF02875 Mur ligase family, glutamate ligase domain CYA_0077 PF08245 Mur ligase middle domain CYA_0078 PF11332 CYA_0078 CYA_0079 PF02469 Fasciclin domain CYA_0081 PF01715 IPP transferase CYA_0082 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CYA_0082 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CYA_0082 PF16582 CYA_0082 CYA_0084 PF00834 Ribulose-phosphate 3 epimerase family CYA_0086 PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CYA_0087 PF02673 CYA_0087 CYA_0088 PF01256 Carbohydrate kinase CYA_0088 PF03853 YjeF-related protein N-terminus CYA_0089 PF10989 CYA_0089 CYA_0090 PF01737 YCF9 CYA_0091 PF01385 CYA_0091 CYA_0091 PF07282 CYA_0091 CYA_0092 PF02592 CYA_0092 CYA_0093 PF00072 Response regulator receiver domain CYA_0094 PF13649 Methyltransferase domain CYA_0096 PF10674 Protein of unknown function (DUF2488) CYA_0097 PF07690 Major Facilitator Superfamily CYA_0099 PF00534 Glycosyl transferases group 1 CYA_0099 PF13439 Glycosyltransferase Family 4 CYA_0100 PF07228 Stage II sporulation protein E (SpoIIE) CYA_0100 PF13492 GAF domain CYA_0103 PF00206 Lyase CYA_0103 PF14698 Argininosuccinate lyase C-terminal CYA_0107 PF02350 UDP-N-acetylglucosamine 2-epimerase CYA_0109 PF00091 Tubulin/FtsZ family, GTPase domain CYA_0109 PF12327 FtsZ family, C-terminal domain CYA_0110 PF01820 D-ala D-ala ligase N-terminus CYA_0110 PF07478 D-ala D-ala ligase C-terminus CYA_0112 PF05958 tRNA (Uracil-5-)-methyltransferase CYA_0112 PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus CYA_0113 PF03130 PBS lyase HEAT-like repeat CYA_0113 PF13646 HEAT repeats CYA_0114 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CYA_0116 PF07466 CYA_0116 CYA_0117 PF03372 Endonuclease/Exonuclease/phosphatase family CYA_0117 PF16409 CYA_0117 CYA_0118 PF01888 CbiD CYA_0120 PF01327 Polypeptide deformylase CYA_0121 PF12159 CYA_0121 CYA_0122 PF10693 CYA_0122 CYA_0123 PF04485 Phycobilisome degradation protein nblA CYA_0125 PF00076 RNA recognition motif CYA_0126 PF00149 Calcineurin-like phosphoesterase CYA_0127 PF04226 CYA_0127 CYA_0128 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CYA_0129 PF12849 PBP superfamily domain CYA_0130 PF00012 Hsp70 protein CYA_0131 PF02754 CYA_0131 CYA_0131 PF13183 4Fe-4S dicluster domain CYA_0132 PF00226 DnaJ domain CYA_0132 PF01556 DnaJ C terminal domain CYA_0133 PF00501 AMP-binding enzyme CYA_0135 PF09827 CRISPR associated protein Cas2 CYA_0137 PF13231 CYA_0137 CYA_0138 PF05685 Putative restriction endonuclease CYA_0139 PF05685 Putative restriction endonuclease CYA_0140 PF05685 Putative restriction endonuclease CYA_0142 PF00504 Chlorophyll A-B binding protein CYA_0143 PF00291 Pyridoxal-phosphate dependent enzyme CYA_0143 PF00585 C-terminal regulatory domain of Threonine dehydratase CYA_0144 PF01243 Pyridoxamine 5'-phosphate oxidase CYA_0145 PF12697 Alpha/beta hydrolase family CYA_0146 PF03808 CYA_0146 CYA_0147 PF00005 ABC transporter CYA_0148 PF01717 Cobalamin-independent synthase, Catalytic domain CYA_0148 PF08267 Cobalamin-independent synthase, N-terminal domain CYA_0149 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CYA_0150 PF00528 Binding-protein-dependent transport system inner membrane component CYA_0151 PF00528 Binding-protein-dependent transport system inner membrane component CYA_0152 PF00005 ABC transporter CYA_0152 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CYA_0153 PF00005 ABC transporter CYA_0155 PF01192 RNA polymerase Rpb6 CYA_0156 PF01797 Transposase IS200 like CYA_0157 PF00924 Mechanosensitive ion channel CYA_0158 PF01385 CYA_0158 CYA_0158 PF07282 CYA_0158 CYA_0158 PF12323 CYA_0158 CYA_0159 PF01699 Sodium/calcium exchanger protein CYA_0161 PF02441 Flavoprotein CYA_0161 PF04127 DNA / pantothenate metabolism flavoprotein CYA_0162 PF14250 CYA_0162 CYA_0163 PF13205 Bacterial Ig-like domain CYA_0164 PF01494 FAD binding domain CYA_0165 PF01935 Domain of unknown function DUF87 CYA_0165 PF09378 HAS barrel domain CYA_0166 PF08241 Methyltransferase domain CYA_0167 PF01717 Cobalamin-independent synthase, Catalytic domain CYA_0167 PF08267 Cobalamin-independent synthase, N-terminal domain CYA_0169 PF02391 MoaE protein CYA_0170 PF02597 ThiS family CYA_0171 PF01967 MoaC family CYA_0171 PF12804 MobA-like NTP transferase domain CYA_0172 PF04055 Radical SAM superfamily CYA_0172 PF06463 Molybdenum Cofactor Synthesis C CYA_0172 PF13353 4Fe-4S single cluster domain CYA_0173 PF00994 Probable molybdopterin binding domain CYA_0173 PF03453 MoeA N-terminal region (domain I and II) CYA_0173 PF03454 MoeA C-terminal region (domain IV) CYA_0174 PF09655 CYA_0174 CYA_0178 PF01979 Amidohydrolase family CYA_0180 PF00004 ATPase family associated with various cellular activities (AAA) CYA_0180 PF02861 Clp amino terminal domain CYA_0180 PF07724 AAA domain (Cdc48 subfamily) CYA_0180 PF10431 C-terminal, D2-small domain, of ClpB protein CYA_0181 PF00575 S1 RNA binding domain CYA_0181 PF00773 RNB domain CYA_0181 PF08206 Ribonuclease B OB domain CYA_0182 PF01895 PhoU domain CYA_0183 PF07005 Protein of unknown function, DUF1537 CYA_0183 PF17042 CYA_0183 CYA_0184 PF00128 Alpha amylase, catalytic domain CYA_0184 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CYA_0184 PF11941 Domain of unknown function (DUF3459) CYA_0188 PF01165 Ribosomal protein S21 CYA_0189 PF00089 Trypsin CYA_0189 PF17210 CYA_0189 CYA_0193 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CYA_0193 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal CYA_0193 PF13288 DXP reductoisomerase C-terminal domain CYA_0194 PF00005 ABC transporter CYA_0194 PF00664 ABC transporter transmembrane region CYA_0195 PF00117 Glutamine amidotransferase class-I CYA_0195 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CYA_0196 PF01225 Mur ligase family, catalytic domain CYA_0196 PF02875 Mur ligase family, glutamate ligase domain CYA_0196 PF08245 Mur ligase middle domain CYA_0197 PF07963 Prokaryotic N-terminal methylation motif CYA_0198 PF07963 Prokaryotic N-terminal methylation motif CYA_0199 PF07963 Prokaryotic N-terminal methylation motif CYA_0201 PF00072 Response regulator receiver domain CYA_0201 PF00196 Bacterial regulatory proteins, luxR family CYA_0202 PF00805 Pentapeptide repeats (8 copies) CYA_0203 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CYA_0203 PF06827 Zinc finger found in FPG and IleRS CYA_0203 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CYA_0204 PF02427 Photosystem I reaction centre subunit IV / PsaE CYA_0205 PF00504 Chlorophyll A-B binding protein CYA_0206 PF00795 Carbon-nitrogen hydrolase CYA_0206 PF02540 NAD synthase CYA_0207 PF01541 GIY-YIG catalytic domain CYA_0207 PF02151 UvrB/uvrC motif CYA_0207 PF08459 UvrC Helix-hairpin-helix N-terminal CYA_0207 PF12826 Helix-hairpin-helix motif CYA_0208 PF00498 FHA domain CYA_0208 PF00905 Penicillin binding protein transpeptidase domain CYA_0208 PF00912 Transglycosylase CYA_0209 PF00069 Protein kinase domain CYA_0211 PF00850 Histone deacetylase domain CYA_0212 PF13672 Protein phosphatase 2C CYA_0213 PF03109 CYA_0213 CYA_0215 PF00427 Phycobilisome Linker polypeptide CYA_0216 PF02985 HEAT repeat CYA_0216 PF13646 HEAT repeats CYA_0217 PF03130 PBS lyase HEAT-like repeat CYA_0217 PF13646 HEAT repeats CYA_0218 PF01383 CpcD/allophycocyanin linker domain CYA_0220 PF00502 Phycobilisome protein CYA_0221 PF00502 Phycobilisome protein CYA_0223 PF00290 Tryptophan synthase alpha chain CYA_0224 PF13458 Periplasmic binding protein CYA_0226 PF01385 CYA_0226 CYA_0226 PF07282 CYA_0226 CYA_0226 PF12323 CYA_0226 CYA_0227 PF13649 Methyltransferase domain CYA_0228 PF00005 ABC transporter CYA_0230 PF05120 CYA_0230 CYA_0231 PF12527 CYA_0231 CYA_0232 PF00079 Serpin (serine protease inhibitor) CYA_0233 PF05670 CYA_0233 CYA_0233 PF05833 Fibronectin-binding protein A N-terminus (FbpA) CYA_0234 PF02643 Uncharacterized ACR, COG1430 CYA_0235 PF00106 short chain dehydrogenase CYA_0236 PF14344 CYA_0236 CYA_0237 PF02511 Thymidylate synthase complementing protein CYA_0238 PF13489 Methyltransferase domain CYA_0239 PF02397 CYA_0239 CYA_0239 PF13727 CoA-binding domain CYA_0240 PF01259 SAICAR synthetase CYA_0241 PF09925 CYA_0241 CYA_0243 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CYA_0243 PF03900 Porphobilinogen deaminase, C-terminal domain CYA_0244 PF11068 YlqD protein CYA_0245 PF13641 Glycosyltransferase like family 2 CYA_0246 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CYA_0246 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain CYA_0247 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CYA_0247 PF02403 Seryl-tRNA synthetase N-terminal domain CYA_0248 PF03965 Penicillinase repressor CYA_0249 PF05569 BlaR1 peptidase M56 CYA_0251 PF00719 Inorganic pyrophosphatase CYA_0252 PF02683 CYA_0252 CYA_0253 PF00512 His Kinase A (phospho-acceptor) domain CYA_0253 PF01590 GAF domain CYA_0253 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYA_0253 PF13426 PAS domain CYA_0254 PF05140 CYA_0254 CYA_0255 PF01565 FAD binding domain CYA_0258 PF01593 Flavin containing amine oxidoreductase CYA_0258 PF13450 NAD(P)-binding Rossmann-like domain CYA_0259 PF06298 Photosystem II protein Y (PsbY) CYA_0261 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family CYA_0262 PF04107 Glutamate-cysteine ligase family 2(GCS2) CYA_0263 PF00128 Alpha amylase, catalytic domain CYA_0263 PF11896 Domain of unknown function (DUF3416) CYA_0264 PF01523 Putative modulator of DNA gyrase CYA_0266 PF09493 CYA_0266 CYA_0267 PF02542 YgbB family CYA_0268 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CYA_0269 PF06202 Amylo-alpha-1,6-glucosidase CYA_0269 PF14742 CYA_0269 CYA_0270 PF00534 Glycosyl transferases group 1 CYA_0270 PF13439 Glycosyltransferase Family 4 CYA_0273 PF04134 CYA_0273 CYA_0277 PF00156 Phosphoribosyl transferase domain CYA_0277 PF13522 Glutamine amidotransferase domain CYA_0278 PF01327 Polypeptide deformylase CYA_0279 PF04134 CYA_0279 CYA_0280 PF13385 Concanavalin A-like lectin/glucanases superfamily CYA_0282 PF01513 ATP-NAD kinase CYA_0283 PF00004 ATPase family associated with various cellular activities (AAA) CYA_0285 PF00288 GHMP kinases N terminal domain CYA_0285 PF08544 GHMP kinases C terminal CYA_0286 PF00330 Aconitase family (aconitate hydratase) CYA_0287 PF08543 Phosphomethylpyrimidine kinase CYA_0289 PF00111 2Fe-2S iron-sulfur cluster binding domain CYA_0290 PF08846 CYA_0290 CYA_0291 PF00588 SpoU rRNA Methylase family CYA_0291 PF08032 RNA 2'-O ribose methyltransferase substrate binding CYA_0292 PF00636 Ribonuclease III domain CYA_0293 PF02605 Photosystem I reaction centre subunit XI CYA_0294 PF01701 Photosystem I reaction centre subunit IX / PsaJ CYA_0295 PF02507 Photosystem I reaction centre subunit III CYA_0296 PF01134 Glucose inhibited division protein A CYA_0296 PF13932 GidA associated domain 3 CYA_0297 PF00814 Glycoprotease family CYA_0298 PF00291 Pyridoxal-phosphate dependent enzyme CYA_0299 PF02469 Fasciclin domain CYA_0300 PF02597 ThiS family CYA_0301 PF02245 Methylpurine-DNA glycosylase (MPG) CYA_0302 PF13529 Peptidase_C39 like family CYA_0303 PF00875 DNA photolyase CYA_0303 PF03441 FAD binding domain of DNA photolyase CYA_0304 PF01436 NHL repeat CYA_0305 PF00216 Bacterial DNA-binding protein CYA_0306 PF11061 CYA_0306 CYA_0307 PF13581 Histidine kinase-like ATPase domain CYA_0308 PF11832 CYA_0308 CYA_0309 PF01588 Putative tRNA binding domain CYA_0309 PF03147 Ferredoxin-fold anticodon binding domain CYA_0309 PF03483 B3/4 domain CYA_0309 PF03484 tRNA synthetase B5 domain CYA_0310 PF00696 Amino acid kinase family CYA_0311 PF00005 ABC transporter CYA_0311 PF00664 ABC transporter transmembrane region CYA_0313 PF00004 ATPase family associated with various cellular activities (AAA) CYA_0314 PF06868 CYA_0314 CYA_0315 PF00162 Phosphoglycerate kinase CYA_0316 PF01593 Flavin containing amine oxidoreductase CYA_0317 PF00494 Squalene/phytoene synthase CYA_0318 PF00270 DEAD/DEAH box helicase CYA_0318 PF00271 Helicase conserved C-terminal domain CYA_0318 PF09369 CYA_0318 CYA_0319 PF01061 CYA_0319 CYA_0320 PF09957 CYA_0320 CYA_0321 PF02384 N-6 DNA Methylase CYA_0321 PF04480 Protein of unknown function (DUF559) CYA_0322 PF00176 SNF2 family N-terminal domain CYA_0322 PF00271 Helicase conserved C-terminal domain CYA_0323 PF00027 Cyclic nucleotide-binding domain CYA_0324 PF13563 2'-5' RNA ligase superfamily CYA_0325 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CYA_0325 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CYA_0326 PF01553 Acyltransferase CYA_0329 PF05685 Putative restriction endonuclease CYA_0330 PF01266 FAD dependent oxidoreductase CYA_0331 PF04839 Plastid and cyanobacterial ribosomal protein (PSRP-3 / Ycf65) CYA_0332 PF00118 TCP-1/cpn60 chaperonin family CYA_0333 PF00152 tRNA synthetases class II (D, K and N) CYA_0333 PF01336 OB-fold nucleic acid binding domain CYA_0334 PF05685 Putative restriction endonuclease CYA_0335 PF13481 AAA domain CYA_0335 PF13541 Subunit ChlI of Mg-chelatase CYA_0336 PF01264 Chorismate synthase CYA_0337 PF03309 Type III pantothenate kinase CYA_0338 PF01871 AMMECR1 CYA_0339 PF00291 Pyridoxal-phosphate dependent enzyme CYA_0342 PF13443 Cro/C1-type HTH DNA-binding domain CYA_0343 PF00012 Hsp70 protein CYA_0345 PF07282 CYA_0345 CYA_0345 PF12323 CYA_0345 CYA_0346 PF00239 Resolvase, N terminal domain CYA_0346 PF13411 MerR HTH family regulatory protein CYA_0348 PF08282 haloacid dehalogenase-like hydrolase CYA_0349 PF00580 UvrD/REP helicase N-terminal domain CYA_0349 PF13361 UvrD-like helicase C-terminal domain CYA_0350 PF01029 NusB family CYA_0352 PF03358 NADPH-dependent FMN reductase CYA_0354 PF00534 Glycosyl transferases group 1 CYA_0354 PF13439 Glycosyltransferase Family 4 CYA_0356 PF03703 CYA_0356 CYA_0358 PF00520 Ion transport protein CYA_0359 PF02637 GatB domain CYA_0359 PF02934 GatB/GatE catalytic domain CYA_0360 PF02545 Maf-like protein CYA_0362 PF00708 Acylphosphatase CYA_0364 PF00171 Aldehyde dehydrogenase family CYA_0365 PF01078 Magnesium chelatase, subunit ChlI CYA_0365 PF13519 von Willebrand factor type A domain CYA_0366 PF11209 CYA_0366 CYA_0368 PF06723 MreB/Mbl protein CYA_0369 PF04085 rod shape-determining protein MreC CYA_0370 PF04093 CYA_0370 CYA_0371 PF12838 4Fe-4S dicluster domain CYA_0373 PF00069 Protein kinase domain CYA_0374 PF00535 Glycosyl transferase family 2 CYA_0375 PF00459 Inositol monophosphatase family CYA_0376 PF01208 Uroporphyrinogen decarboxylase (URO-D) CYA_0377 PF00348 Polyprenyl synthetase CYA_0378 PF02681 CYA_0378 CYA_0380 PF13369 CYA_0380 CYA_0380 PF13371 Tetratricopeptide repeat CYA_0383 PF07082 CYA_0383 CYA_0386 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CYA_0386 PF01872 RibD C-terminal domain CYA_0387 PF00342 Phosphoglucose isomerase CYA_0388 PF10128 CYA_0388 CYA_0389 PF00504 Chlorophyll A-B binding protein CYA_0391 PF00266 Aminotransferase class-V CYA_0392 PF00248 Aldo/keto reductase family CYA_0392 PF13534 4Fe-4S dicluster domain CYA_0395 PF07282 CYA_0395 CYA_0395 PF12323 CYA_0395 CYA_0397 PF00239 Resolvase, N terminal domain CYA_0397 PF13411 MerR HTH family regulatory protein CYA_0398 PF00121 Triosephosphate isomerase CYA_0399 PF00128 Alpha amylase, catalytic domain CYA_0401 PF01435 Peptidase family M48 CYA_0402 PF00294 pfkB family carbohydrate kinase CYA_0403 PF00005 ABC transporter CYA_0403 PF00664 ABC transporter transmembrane region CYA_0404 PF09988 CYA_0404 CYA_0405 PF02558 Ketopantoate reductase PanE/ApbA CYA_0405 PF08546 Ketopantoate reductase PanE/ApbA C terminal CYA_0406 PF00156 Phosphoribosyl transferase domain CYA_0407 PF00805 Pentapeptide repeats (8 copies) CYA_0408 PF01126 Heme oxygenase CYA_0409 PF00562 RNA polymerase Rpb2, domain 6 CYA_0409 PF04560 RNA polymerase Rpb2, domain 7 CYA_0409 PF04561 RNA polymerase Rpb2, domain 2 CYA_0409 PF04563 RNA polymerase beta subunit CYA_0409 PF04565 RNA polymerase Rpb2, domain 3 CYA_0409 PF10385 RNA polymerase beta subunit external 1 domain CYA_0410 PF00623 RNA polymerase Rpb1, domain 2 CYA_0410 PF04983 RNA polymerase Rpb1, domain 3 CYA_0410 PF04997 RNA polymerase Rpb1, domain 1 CYA_0411 PF04983 RNA polymerase Rpb1, domain 3 CYA_0411 PF04998 RNA polymerase Rpb1, domain 5 CYA_0411 PF05000 RNA polymerase Rpb1, domain 4 CYA_0412 PF03167 Uracil DNA glycosylase superfamily CYA_0413 PF03070 TENA/THI-4/PQQC family CYA_0414 PF01488 Shikimate / quinate 5-dehydrogenase CYA_0415 PF11266 Protein of unknown function (DUF3066) CYA_0418 PF00805 Pentapeptide repeats (8 copies) CYA_0420 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CYA_0420 PF02874 ATP synthase alpha/beta family, beta-barrel domain CYA_0421 PF00072 Response regulator receiver domain CYA_0421 PF00486 Transcriptional regulatory protein, C terminal CYA_0422 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CYA_0423 PF02082 Transcriptional regulator CYA_0424 PF03186 CYA_0424 CYA_0427 PF00004 ATPase family associated with various cellular activities (AAA) CYA_0427 PF00101 Ribulose bisphosphate carboxylase, small chain CYA_0428 PF00999 Sodium/hydrogen exchanger family CYA_0429 PF00498 FHA domain CYA_0430 PF11623 Protein of unknown function (DUF3252) CYA_0433 PF11165 CYA_0433 CYA_0434 PF00873 AcrB/AcrD/AcrF family CYA_0435 PF16576 CYA_0435 CYA_0436 PF01385 CYA_0436 CYA_0437 PF01797 Transposase IS200 like CYA_0439 PF13847 Methyltransferase domain CYA_0441 PF00892 EamA-like transporter family CYA_0444 PF01457 Leishmanolysin CYA_0447 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase CYA_0447 PF09364 XFP N-terminal domain CYA_0448 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) CYA_0448 PF13614 AAA domain CYA_0450 PF14345 CYA_0450 CYA_0452 PF01724 Domain of unknown function DUF29 CYA_0454 PF09654 CYA_0454 CYA_0456 PF02576 Uncharacterised BCR, YhbC family COG0779 CYA_0456 PF17384 CYA_0456 CYA_0457 PF08529 NusA N-terminal domain CYA_0457 PF13184 NusA-like KH domain CYA_0458 PF02441 Flavoprotein CYA_0459 PF12697 Alpha/beta hydrolase family CYA_0461 PF02570 Precorrin-8X methylmutase CYA_0463 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CYA_0463 PF02390 Putative methyltransferase CYA_0464 PF01936 NYN domain CYA_0465 PF03749 Sugar fermentation stimulation protein CYA_0466 PF03372 Endonuclease/Exonuclease/phosphatase family CYA_0467 PF01625 Peptide methionine sulfoxide reductase CYA_0468 PF00528 Binding-protein-dependent transport system inner membrane component CYA_0469 PF00528 Binding-protein-dependent transport system inner membrane component CYA_0470 PF00005 ABC transporter CYA_0470 PF08402 TOBE domain CYA_0471 PF13531 Bacterial extracellular solute-binding protein CYA_0472 PF13302 Acetyltransferase (GNAT) domain CYA_0472 PF13380 CoA binding domain CYA_0472 PF13549 ATP-grasp domain CYA_0472 PF13607 Succinyl-CoA ligase like flavodoxin domain CYA_0473 PF00171 Aldehyde dehydrogenase family CYA_0473 PF00465 Iron-containing alcohol dehydrogenase CYA_0474 PF02566 OsmC-like protein CYA_0475 PF04055 Radical SAM superfamily CYA_0475 PF13353 4Fe-4S single cluster domain CYA_0476 PF00805 Pentapeptide repeats (8 copies) CYA_0477 PF01228 Glycine radical CYA_0477 PF02901 Pyruvate formate lyase CYA_0478 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CYA_0479 PF00072 Response regulator receiver domain CYA_0480 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CYA_0480 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CYA_0481 PF00561 alpha/beta hydrolase fold CYA_0482 PF01597 Glycine cleavage H-protein CYA_0483 PF00498 FHA domain CYA_0483 PF00990 GGDEF domain CYA_0484 PF16363 CYA_0484 CYA_0485 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CYA_0485 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CYA_0485 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CYA_0486 PF01545 Cation efflux family CYA_0486 PF16916 CYA_0486 CYA_0488 PF14279 CYA_0488 CYA_0489 PF12697 Alpha/beta hydrolase family CYA_0490 PF01330 RuvA N terminal domain CYA_0490 PF07499 RuvA, C-terminal domain CYA_0490 PF14520 Helix-hairpin-helix domain CYA_0491 PF01467 Cytidylyltransferase CYA_0492 PF12838 4Fe-4S dicluster domain CYA_0494 PF11998 CYA_0494 CYA_0499 PF01593 Flavin containing amine oxidoreductase CYA_0500 PF04107 Glutamate-cysteine ligase family 2(GCS2) CYA_0502 PF00582 Universal stress protein family CYA_0502 PF00999 Sodium/hydrogen exchanger family CYA_0503 PF09366 CYA_0503 CYA_0504 PF01502 Phosphoribosyl-AMP cyclohydrolase CYA_0504 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CYA_0505 PF01522 Polysaccharide deacetylase CYA_0505 PF09992 Predicted periplasmic protein (DUF2233) CYA_0506 PF01383 CpcD/allophycocyanin linker domain CYA_0507 PF13301 CYA_0507 CYA_0510 PF02514 CYA_0510 CYA_0511 PF00076 RNA recognition motif CYA_0512 PF00133 tRNA synthetases class I (I, L, M and V) CYA_0512 PF08264 Anticodon-binding domain of tRNA CYA_0512 PF10458 Valyl tRNA synthetase tRNA binding arm CYA_0513 PF13411 MerR HTH family regulatory protein CYA_0516 PF01148 Cytidylyltransferase family CYA_0519 PF00676 Dehydrogenase E1 component CYA_0520 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains CYA_0522 PF02830 V4R domain CYA_0523 PF00502 Phycobilisome protein CYA_0524 PF00502 Phycobilisome protein CYA_0525 PF02830 V4R domain CYA_0526 PF00111 2Fe-2S iron-sulfur cluster binding domain CYA_0527 PF09084 NMT1/THI5 like CYA_0528 PF00427 Phycobilisome Linker polypeptide CYA_0529 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CYA_0529 PF02602 Uroporphyrinogen-III synthase HemD CYA_0530 PF00378 Enoyl-CoA hydratase/isomerase family CYA_0531 PF00476 DNA polymerase family A CYA_0531 PF01367 5'-3' exonuclease, C-terminal SAM fold CYA_0531 PF01612 3'-5' exonuclease CYA_0531 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CYA_0532 PF00462 Glutaredoxin CYA_0533 PF10615 Protein of unknown function (DUF2470) CYA_0534 PF08241 Methyltransferase domain CYA_0535 PF00491 Arginase family CYA_0536 PF02531 PsaD CYA_0537 PF00578 AhpC/TSA family CYA_0537 PF10417 C-terminal domain of 1-Cys peroxiredoxin CYA_0540 PF08865 CYA_0540 CYA_0542 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CYA_0543 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CYA_0543 PF01488 Shikimate / quinate 5-dehydrogenase CYA_0543 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CYA_0544 PF05969 Photosystem II complex subunit Ycf12 CYA_0545 PF00009 Elongation factor Tu GTP binding domain CYA_0545 PF00679 Elongation factor G C-terminus CYA_0545 PF03144 Elongation factor Tu domain 2 CYA_0546 PF01435 Peptidase family M48 CYA_0546 PF14559 Tetratricopeptide repeat CYA_0547 PF00994 Probable molybdopterin binding domain CYA_0547 PF02464 Competence-damaged protein CYA_0548 PF00583 Acetyltransferase (GNAT) family CYA_0549 PF01797 Transposase IS200 like CYA_0553 PF01883 Domain of unknown function DUF59 CYA_0553 PF10609 ParA/MinD ATPase like CYA_0554 PF01103 Surface antigen CYA_0554 PF07244 Surface antigen variable number repeat CYA_0554 PF08479 POTRA domain, ShlB-type CYA_0556 PF00132 Bacterial transferase hexapeptide (six repeats) CYA_0558 PF00462 Glutaredoxin CYA_0559 PF01722 BolA-like protein CYA_0560 PF04020 CYA_0560 CYA_0561 PF01131 DNA topoisomerase CYA_0561 PF01751 Toprim domain CYA_0561 PF13368 CYA_0561 CYA_0562 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CYA_0563 PF12169 DNA polymerase III subunits gamma and tau domain III CYA_0563 PF13177 DNA polymerase III, delta subunit CYA_0565 PF01121 Dephospho-CoA kinase CYA_0566 PF00682 HMGL-like CYA_0566 PF08502 LeuA allosteric (dimerisation) domain CYA_0568 PF02540 NAD synthase CYA_0569 PF03968 OstA-like protein CYA_0569 PF12600 CYA_0569 CYA_0570 PF08865 CYA_0570 CYA_0573 PF11360 CYA_0573 CYA_0574 PF02675 S-adenosylmethionine decarboxylase CYA_0575 PF01564 Spermine/spermidine synthase CYA_0575 PF17284 CYA_0575 CYA_0576 PF00850 Histone deacetylase domain CYA_0577 PF01370 NAD dependent epimerase/dehydratase family CYA_0580 PF02410 Oligomerisation domain CYA_0581 PF01966 HD domain CYA_0582 PF00009 Elongation factor Tu GTP binding domain CYA_0582 PF00679 Elongation factor G C-terminus CYA_0582 PF03144 Elongation factor Tu domain 2 CYA_0582 PF06421 GTP-binding protein LepA C-terminus CYA_0583 PF01936 NYN domain CYA_0584 PF02091 Glycyl-tRNA synthetase alpha subunit CYA_0585 PF00227 Proteasome subunit CYA_0586 PF01926 50S ribosome-binding GTPase CYA_0586 PF05128 CYA_0586 CYA_0587 PF04248 Domain of unknown function (DUF427) CYA_0588 PF07676 WD40-like Beta Propeller Repeat CYA_0589 PF00155 Aminotransferase class I and II CYA_0591 PF00815 Histidinol dehydrogenase CYA_0594 PF00515 Tetratricopeptide repeat CYA_0594 PF07719 Tetratricopeptide repeat CYA_0594 PF13424 Tetratricopeptide repeat CYA_0594 PF13432 Tetratricopeptide repeat CYA_0595 PF00239 Resolvase, N terminal domain CYA_0595 PF13411 MerR HTH family regulatory protein CYA_0596 PF07282 CYA_0596 CYA_0596 PF12323 CYA_0596 CYA_0597 PF04539 Sigma-70 region 3 CYA_0597 PF04542 Sigma-70 region 2 CYA_0597 PF04545 Sigma-70, region 4 CYA_0603 PF00449 Urease alpha-subunit, N-terminal domain CYA_0603 PF01979 Amidohydrolase family CYA_0604 PF02814 UreE urease accessory protein, N-terminal domain CYA_0604 PF05194 UreE urease accessory protein, C-terminal domain CYA_0605 PF01730 UreF CYA_0606 PF02492 CobW/HypB/UreG, nucleotide-binding domain CYA_0607 PF01774 UreD urease accessory protein CYA_0609 PF04115 Ureidoglycolate hydrolase CYA_0610 PF00188 Cysteine-rich secretory protein family CYA_0612 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CYA_0612 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CYA_0613 PF13379 NMT1-like family CYA_0614 PF00528 Binding-protein-dependent transport system inner membrane component CYA_0615 PF00005 ABC transporter CYA_0615 PF13379 NMT1-like family CYA_0616 PF00005 ABC transporter CYA_0619 PF00384 Molybdopterin oxidoreductase CYA_0619 PF01568 Molydopterin dinucleotide binding domain CYA_0619 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CYA_0620 PF01385 CYA_0620 CYA_0620 PF07282 CYA_0620 CYA_0621 PF09655 CYA_0621 CYA_0622 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CYA_0622 PF02843 Phosphoribosylglycinamide synthetase, C domain CYA_0622 PF02844 Phosphoribosylglycinamide synthetase, N domain CYA_0623 PF00535 Glycosyl transferase family 2 CYA_0624 PF01966 HD domain CYA_0625 PF13472 GDSL-like Lipase/Acylhydrolase family CYA_0626 PF00753 Metallo-beta-lactamase superfamily CYA_0626 PF07521 RNA-metabolising metallo-beta-lactamase CYA_0627 PF00701 Dihydrodipicolinate synthetase family CYA_0628 PF00881 Nitroreductase family CYA_0630 PF00591 Glycosyl transferase family, a/b domain CYA_0630 PF02885 Glycosyl transferase family, helical bundle domain CYA_0631 PF13638 PIN domain CYA_0632 PF00551 Formyl transferase CYA_0633 PF09626 Dihaem cytochrome c CYA_0634 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CYA_0635 PF11688 CYA_0635 CYA_0636 PF02469 Fasciclin domain CYA_0637 PF00512 His Kinase A (phospho-acceptor) domain CYA_0637 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYA_0637 PF07689 KaiB domain CYA_0638 PF10216 CYA_0638 CYA_0639 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains CYA_0640 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains CYA_0640 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CYA_0642 PF05151 Photosystem II reaction centre M protein (PsbM) CYA_0643 PF00111 2Fe-2S iron-sulfur cluster binding domain CYA_0644 PF00421 Photosystem II protein CYA_0645 PF01405 Photosystem II reaction centre T protein CYA_0646 PF13507 CobB/CobQ-like glutamine amidotransferase domain CYA_0647 PF00072 Response regulator receiver domain CYA_0648 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase CYA_0649 PF12679 CYA_0649 CYA_0651 PF04029 2-phosphosulpholactate phosphatase CYA_0652 PF01118 Semialdehyde dehydrogenase, NAD binding domain CYA_0652 PF02774 Semialdehyde dehydrogenase, dimerisation domain CYA_0654 PF14249 CYA_0654 CYA_0656 PF00004 ATPase family associated with various cellular activities (AAA) CYA_0656 PF02151 UvrB/uvrC motif CYA_0656 PF02861 Clp amino terminal domain CYA_0656 PF07724 AAA domain (Cdc48 subfamily) CYA_0656 PF10431 C-terminal, D2-small domain, of ClpB protein CYA_0657 PF00574 Clp protease CYA_0658 PF05685 Putative restriction endonuclease CYA_0659 PF00574 Clp protease CYA_0661 PF06206 CpeT/CpcT family (DUF1001) CYA_0662 PF00390 Malic enzyme, N-terminal domain CYA_0662 PF01842 ACT domain CYA_0662 PF03949 Malic enzyme, NAD binding domain CYA_0663 PF00656 Caspase domain CYA_0664 PF07758 CYA_0664 CYA_0665 PF02517 CAAX protease self-immunity CYA_0666 PF08241 Methyltransferase domain CYA_0667 PF00483 Nucleotidyl transferase CYA_0668 PF01593 Flavin containing amine oxidoreductase CYA_0671 PF02557 D-alanyl-D-alanine carboxypeptidase CYA_0672 PF00578 AhpC/TSA family CYA_0673 PF13328 HD domain CYA_0675 PF00571 CBS domain CYA_0675 PF01769 Divalent cation transporter CYA_0675 PF03448 MgtE intracellular N domain CYA_0677 PF02308 CYA_0677 CYA_0678 PF01169 CYA_0678 CYA_0680 PF02021 Uncharacterised protein family UPF0102 CYA_0681 PF05991 CYA_0681 CYA_0683 PF08241 Methyltransferase domain CYA_0684 PF00483 Nucleotidyl transferase CYA_0685 PF00497 Bacterial extracellular solute-binding proteins, family 3 CYA_0686 PF00528 Binding-protein-dependent transport system inner membrane component CYA_0687 PF01385 CYA_0687 CYA_0687 PF07282 CYA_0687 CYA_0688 PF00890 FAD binding domain CYA_0688 PF02910 Fumarate reductase flavoprotein C-term CYA_0689 PF00202 Aminotransferase class-III CYA_0690 PF07282 CYA_0690 CYA_0692 PF04055 Radical SAM superfamily CYA_0693 PF01926 50S ribosome-binding GTPase CYA_0694 PF13301 CYA_0694 CYA_0695 PF11347 CYA_0695 CYA_0696 PF11165 CYA_0696 CYA_0697 PF03819 MazG nucleotide pyrophosphohydrolase domain CYA_0699 PF03171 2OG-Fe(II) oxygenase superfamily CYA_0699 PF14226 non-haem dioxygenase in morphine synthesis N-terminal CYA_0700 PF01841 Transglutaminase-like superfamily CYA_0700 PF08379 CYA_0700 CYA_0702 PF00571 CBS domain CYA_0702 PF01368 DHH family CYA_0702 PF01743 Poly A polymerase head domain CYA_0702 PF12627 Probable RNA and SrmB- binding site of polymerase A CYA_0703 PF01765 Ribosome recycling factor CYA_0704 PF01385 CYA_0704 CYA_0704 PF07282 CYA_0704 CYA_0706 PF01169 CYA_0706 CYA_0707 PF03652 Uncharacterised protein family (UPF0081) CYA_0708 PF02021 Uncharacterised protein family UPF0102 CYA_0709 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CYA_0709 PF05221 S-adenosyl-L-homocysteine hydrolase CYA_0710 PF00764 Arginosuccinate synthase CYA_0712 PF13301 CYA_0712 CYA_0713 PF01926 50S ribosome-binding GTPase CYA_0714 PF04055 Radical SAM superfamily CYA_0718 PF01220 Dehydroquinase class II CYA_0719 PF00085 Thioredoxin CYA_0720 PF09579 CYA_0720 CYA_0721 PF13476 AAA domain CYA_0721 PF13558 Putative exonuclease SbcCD, C subunit CYA_0722 PF11189 CYA_0722 CYA_0723 PF10792 CYA_0723 CYA_0724 PF02514 CYA_0724 CYA_0725 PF00923 Transaldolase CYA_0725 PF13202 EF hand CYA_0726 PF07282 CYA_0726 CYA_0726 PF12323 CYA_0726 CYA_0727 PF00239 Resolvase, N terminal domain CYA_0727 PF13411 MerR HTH family regulatory protein CYA_0728 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) CYA_0729 PF01867 CRISPR associated protein Cas1 CYA_0730 PF08798 CRISPR associated protein CYA_0731 PF09704 CRISPR-associated protein (Cas_Cas5) CYA_0732 PF09344 CT1975-like protein CYA_0733 PF09485 CRISPR-associated protein Cse2 (CRISPR_cse2) CYA_0734 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) CYA_0735 PF00271 Helicase conserved C-terminal domain CYA_0736 PF13280 CYA_0736 CYA_0737 PF01385 CYA_0737 CYA_0739 PF07282 CYA_0739 CYA_0740 PF00849 RNA pseudouridylate synthase CYA_0740 PF01479 S4 domain CYA_0741 PF00391 PEP-utilising enzyme, mobile domain CYA_0741 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CYA_0741 PF02896 PEP-utilising enzyme, TIM barrel domain CYA_0742 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CYA_0742 PF00364 Biotin-requiring enzyme CYA_0742 PF02817 e3 binding domain CYA_0743 PF13229 Right handed beta helix region CYA_0744 PF13237 4Fe-4S dicluster domain CYA_0745 PF00146 NADH dehydrogenase CYA_0747 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CYA_0748 PF11691 CYA_0748 CYA_0749 PF02627 Carboxymuconolactone decarboxylase family CYA_0753 PF01774 UreD urease accessory protein CYA_0756 PF13231 CYA_0756 CYA_0758 PF10011 Predicted membrane protein (DUF2254) CYA_0759 PF00448 SRP54-type protein, GTPase domain CYA_0759 PF02881 SRP54-type protein, helical bundle domain CYA_0760 PF00551 Formyl transferase CYA_0761 PF02416 mttA/Hcf106 family CYA_0762 PF01043 SecA preprotein cross-linking domain CYA_0762 PF07516 SecA Wing and Scaffold domain CYA_0762 PF07517 SecA DEAD-like domain CYA_0763 PF04012 CYA_0763 CYA_0764 PF01522 Polysaccharide deacetylase CYA_0765 PF01136 CYA_0765 CYA_0765 PF12392 CYA_0765 CYA_0767 PF01385 CYA_0767 CYA_0767 PF07282 CYA_0767 CYA_0768 PF00300 Histidine phosphatase superfamily (branch 1) CYA_0769 PF00085 Thioredoxin CYA_0770 PF03641 Possible lysine decarboxylase CYA_0771 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CYA_0772 PF13413 Helix-turn-helix domain CYA_0772 PF13464 CYA_0772 CYA_0773 PF00849 RNA pseudouridylate synthase CYA_0773 PF01479 S4 domain CYA_0776 PF02033 Ribosome-binding factor A CYA_0777 PF01385 CYA_0777 CYA_0777 PF07282 CYA_0777 CYA_0777 PF12323 CYA_0777 CYA_0780 PF00875 DNA photolyase CYA_0780 PF03441 FAD binding domain of DNA photolyase CYA_0781 PF00245 Alkaline phosphatase CYA_0782 PF01841 Transglutaminase-like superfamily CYA_0782 PF11992 CYA_0782 CYA_0785 PF04055 Radical SAM superfamily CYA_0785 PF06969 HemN C-terminal domain CYA_0787 PF00012 Hsp70 protein CYA_0788 PF00226 DnaJ domain CYA_0788 PF00684 DnaJ central domain CYA_0788 PF01556 DnaJ C terminal domain CYA_0789 PF01206 Sulfurtransferase TusA CYA_0790 PF03193 Protein of unknown function, DUF258 CYA_0793 PF00805 Pentapeptide repeats (8 copies) CYA_0794 PF00512 His Kinase A (phospho-acceptor) domain CYA_0795 PF00512 His Kinase A (phospho-acceptor) domain CYA_0795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYA_0796 PF00072 Response regulator receiver domain CYA_0796 PF00196 Bacterial regulatory proteins, luxR family CYA_0797 PF11832 CYA_0797 CYA_0798 PF00075 RNase H CYA_0799 PF07085 DRTGG domain CYA_0799 PF13500 AAA domain CYA_0800 PF02386 Cation transport protein CYA_0801 PF02080 TrkA-C domain CYA_0801 PF02254 TrkA-N domain CYA_0802 PF06689 ClpX C4-type zinc finger CYA_0802 PF07724 AAA domain (Cdc48 subfamily) CYA_0802 PF10431 C-terminal, D2-small domain, of ClpB protein CYA_0803 PF00533 BRCA1 C Terminus (BRCT) domain CYA_0803 PF01653 NAD-dependent DNA ligase adenylation domain CYA_0803 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CYA_0803 PF03120 NAD-dependent DNA ligase OB-fold domain CYA_0803 PF12826 Helix-hairpin-helix motif CYA_0803 PF14520 Helix-hairpin-helix domain CYA_0804 PF00035 Double-stranded RNA binding motif CYA_0804 PF14622 Ribonuclease-III-like CYA_0807 PF07282 CYA_0807 CYA_0807 PF12323 CYA_0807 CYA_0808 PF00239 Resolvase, N terminal domain CYA_0808 PF13411 MerR HTH family regulatory protein CYA_0809 PF00633 Helix-hairpin-helix motif CYA_0809 PF00730 HhH-GPD superfamily base excision DNA repair protein CYA_0809 PF14815 NUDIX domain CYA_0810 PF07452 CYA_0810 CYA_0811 PF13354 Beta-lactamase enzyme family CYA_0812 PF13275 S4 domain CYA_0813 PF09991 CYA_0813 CYA_0815 PF00155 Aminotransferase class I and II CYA_0818 PF00266 Aminotransferase class-V CYA_0820 PF04055 Radical SAM superfamily CYA_0820 PF10105 CYA_0820 CYA_0821 PF10150 Ribonuclease E/G family CYA_0822 PF01351 Ribonuclease HII CYA_0824 PF03968 OstA-like protein CYA_0825 PF00741 CYA_0825 CYA_0826 PF07728 AAA domain (dynein-related subfamily) CYA_0829 PF00741 CYA_0829 CYA_0831 PF02830 V4R domain CYA_0833 PF00502 Phycobilisome protein CYA_0834 PF02830 V4R domain CYA_0836 PF07736 Chorismate mutase type I CYA_0837 PF07444 CYA_0837 CYA_0838 PF00311 Phosphoenolpyruvate carboxylase CYA_0839 PF11344 CYA_0839 CYA_0840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYA_0841 PF13767 CYA_0841 CYA_0843 PF09835 CYA_0843 CYA_0844 PF00557 Metallopeptidase family M24 CYA_0845 PF00571 CBS domain CYA_0845 PF00654 Voltage gated chloride channel CYA_0846 PF00730 HhH-GPD superfamily base excision DNA repair protein CYA_0847 PF03033 Glycosyltransferase family 28 N-terminal domain CYA_0847 PF04101 Glycosyltransferase family 28 C-terminal domain CYA_0848 PF14870 Photosynthesis system II assembly factor YCF48 CYA_0849 PF00301 Rubredoxin CYA_0850 PF00498 FHA domain CYA_0852 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain CYA_0852 PF02785 Biotin carboxylase C-terminal domain CYA_0852 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CYA_0853 PF00589 Phage integrase family CYA_0853 PF13495 Phage integrase, N-terminal SAM-like domain CYA_0856 PF00226 DnaJ domain CYA_0858 PF04481 CYA_0858 CYA_0859 PF00491 Arginase family CYA_0860 PF01168 Alanine racemase, N-terminal domain CYA_0861 PF04472 Protein of unknown function (DUF552) CYA_0862 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYA_0863 PF03807 NADP oxidoreductase coenzyme F420-dependent CYA_0863 PF14748 Pyrroline-5-carboxylate reductase dimerisation CYA_0864 PF07690 Major Facilitator Superfamily CYA_0868 PF10718 CYA_0868 CYA_0869 PF01218 Coproporphyrinogen III oxidase CYA_0870 PF02230 Phospholipase/Carboxylesterase CYA_0871 PF09651 CRISPR-associated protein (Cas_APE2256) CYA_0874 PF03787 RAMP superfamily CYA_0876 PF03787 RAMP superfamily CYA_0877 PF03787 RAMP superfamily CYA_0880 PF03787 RAMP superfamily CYA_0881 PF03787 RAMP superfamily CYA_0883 PF10040 Uncharacterized conserved protein (DUF2276) CYA_0885 PF09827 CRISPR associated protein Cas2 CYA_0887 PF01385 CYA_0887 CYA_0887 PF07282 CYA_0887 CYA_0889 PF13280 CYA_0889 CYA_0890 PF09620 CYA_0890 CYA_0891 PF00005 ABC transporter CYA_0892 PF00005 ABC transporter CYA_0892 PF13379 NMT1-like family CYA_0893 PF00528 Binding-protein-dependent transport system inner membrane component CYA_0894 PF13379 NMT1-like family CYA_0895 PF00148 Nitrogenase component 1 type Oxidoreductase CYA_0895 PF08369 Proto-chlorophyllide reductase 57 kD subunit CYA_0896 PF14249 CYA_0896 CYA_0898 PF06967 CYA_0898 CYA_0899 PF01934 Protein of unknown function DUF86 CYA_0900 PF01909 Nucleotidyltransferase domain CYA_0901 PF04357 CYA_0901 CYA_0902 PF01740 STAS domain CYA_0903 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CYA_0905 PF00583 Acetyltransferase (GNAT) family CYA_0907 PF00578 AhpC/TSA family CYA_0908 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) CYA_0909 PF03009 Glycerophosphoryl diester phosphodiesterase family CYA_0910 PF01933 Uncharacterised protein family UPF0052 CYA_0911 PF03668 CYA_0911 CYA_0912 PF00633 Helix-hairpin-helix motif CYA_0912 PF00730 HhH-GPD superfamily base excision DNA repair protein CYA_0912 PF10576 Iron-sulfur binding domain of endonuclease III CYA_0913 PF02163 Peptidase family M50 CYA_0913 PF13180 PDZ domain CYA_0914 PF01106 NifU-like domain CYA_0916 PF00512 His Kinase A (phospho-acceptor) domain CYA_0916 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYA_0917 PF00398 Ribosomal RNA adenine dimethylase CYA_0918 PF00106 short chain dehydrogenase CYA_0919 PF01343 Peptidase family S49 CYA_0922 PF14105 CYA_0922 CYA_0923 PF00999 Sodium/hydrogen exchanger family CYA_0923 PF02254 TrkA-N domain CYA_0924 PF07593 CYA_0924 CYA_0924 PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella CYA_0925 PF01649 Ribosomal protein S20 CYA_0926 PF02195 ParB-like nuclease domain CYA_0927 PF00072 Response regulator receiver domain CYA_0927 PF00196 Bacterial regulatory proteins, luxR family CYA_0928 PF06182 CYA_0928 CYA_0929 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CYA_0930 PF01903 CbiX CYA_0931 PF06089 CYA_0931 CYA_0933 PF10923 CYA_0933 CYA_0934 PF11780 CYA_0934 CYA_0935 PF04461 Protein of unknown function (DUF520) CYA_0936 PF00106 short chain dehydrogenase CYA_0937 PF01943 CYA_0937 CYA_0937 PF14667 Polysaccharide biosynthesis C-terminal domain CYA_0938 PF00498 FHA domain CYA_0939 PF00905 Penicillin binding protein transpeptidase domain CYA_0939 PF03717 Penicillin-binding Protein dimerisation domain CYA_0940 PF00216 Bacterial DNA-binding protein CYA_0941 PF00155 Aminotransferase class I and II CYA_0944 PF09084 NMT1/THI5 like CYA_0945 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CYA_0945 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CYA_0946 PF02445 Quinolinate synthetase A protein CYA_0947 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CYA_0947 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CYA_0948 PF00890 FAD binding domain CYA_0948 PF02910 Fumarate reductase flavoprotein C-term CYA_0949 PF00805 Pentapeptide repeats (8 copies) CYA_0950 PF01969 Protein of unknown function DUF111 CYA_0951 PF00005 ABC transporter CYA_0951 PF06472 CYA_0951 CYA_0952 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CYA_0952 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CYA_0953 PF14559 Tetratricopeptide repeat CYA_0954 PF01740 STAS domain CYA_0955 PF13641 Glycosyltransferase like family 2 CYA_0956 PF02086 D12 class N6 adenine-specific DNA methyltransferase CYA_0959 PF00117 Glutamine amidotransferase class-I CYA_0960 PF08245 Mur ligase middle domain CYA_0961 PF01098 CYA_0961 CYA_0964 PF12146 Putative lysophospholipase CYA_0965 PF10726 CYA_0965 CYA_0966 PF00325 Bacterial regulatory proteins, crp family CYA_0967 PF01975 Survival protein SurE CYA_0968 PF01878 EVE domain CYA_0969 PF00117 Glutamine amidotransferase class-I CYA_0971 PF01025 GrpE CYA_0972 PF00149 Calcineurin-like phosphoesterase CYA_0972 PF02872 5'-nucleotidase, C-terminal domain CYA_0973 PF04286 CYA_0973 CYA_0975 PF00395 S-layer homology domain CYA_0976 PF00248 Aldo/keto reductase family CYA_0978 PF00072 Response regulator receiver domain CYA_0978 PF07228 Stage II sporulation protein E (SpoIIE) CYA_0979 PF01722 BolA-like protein CYA_0981 PF01385 CYA_0981 CYA_0981 PF07282 CYA_0981 CYA_0982 PF02625 XdhC and CoxI family CYA_0983 PF00144 Beta-lactamase CYA_0984 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYA_0984 PF03466 LysR substrate binding domain CYA_0985 PF00591 Glycosyl transferase family, a/b domain CYA_0985 PF02885 Glycosyl transferase family, helical bundle domain CYA_0986 PF07498 Rho termination factor, N-terminal domain CYA_0986 PF16258 CYA_0986 CYA_0990 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CYA_0991 PF00892 EamA-like transporter family CYA_0992 PF00465 Iron-containing alcohol dehydrogenase CYA_0993 PF11104 Type IV pilus assembly protein PilM; CYA_0994 PF05137 CYA_0994 CYA_0996 PF00263 CYA_0996 CYA_0996 PF03958 Bacterial type II/III secretion system short domain CYA_0996 PF11741 AMIN domain CYA_0997 PF13205 Bacterial Ig-like domain CYA_0998 PF13358 DDE superfamily endonuclease CYA_0999 PF01710 Transposase CYA_1001 PF11016 CYA_1001 CYA_1002 PF01276 Orn/Lys/Arg decarboxylase, major domain CYA_1002 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CYA_1003 PF00571 CBS domain CYA_1003 PF01595 CYA_1003 CYA_1003 PF03471 Transporter associated domain CYA_1004 PF03413 Peptidase propeptide and YPEB domain CYA_1005 PF01063 Aminotransferase class IV CYA_1006 PF00156 Phosphoribosyl transferase domain CYA_1007 PF05050 Methyltransferase FkbM domain CYA_1007 PF13844 Glycosyl transferase family 41 CYA_1008 PF13704 CYA_1008 CYA_1009 PF13640 2OG-Fe(II) oxygenase superfamily CYA_1011 PF13524 Glycosyl transferases group 1 CYA_1012 PF05711 Macrocin-O-methyltransferase (TylF) CYA_1012 PF13578 Methyltransferase domain CYA_1013 PF05685 Putative restriction endonuclease CYA_1015 PF00132 Bacterial transferase hexapeptide (six repeats) CYA_1015 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CYA_1016 PF14221 CYA_1016 CYA_1019 PF04480 Protein of unknown function (DUF559) CYA_1021 PF01935 Domain of unknown function DUF87 CYA_1022 PF13855 Leucine rich repeat CYA_1024 PF00005 ABC transporter CYA_1025 PF02672 CP12 domain CYA_1026 PF03239 CYA_1026 CYA_1027 PF01641 SelR domain CYA_1028 PF11909 CYA_1028 CYA_1029 PF00037 4Fe-4S binding domain CYA_1029 PF12617 CYA_1029 CYA_1030 PF01424 R3H domain CYA_1030 PF13604 AAA domain CYA_1031 PF01040 UbiA prenyltransferase family CYA_1032 PF01743 Poly A polymerase head domain CYA_1032 PF12627 Probable RNA and SrmB- binding site of polymerase A CYA_1032 PF13735 tRNA nucleotidyltransferase domain 2 putative CYA_1033 PF00072 Response regulator receiver domain CYA_1033 PF00486 Transcriptional regulatory protein, C terminal CYA_1034 PF00762 Ferrochelatase CYA_1037 PF16166 CYA_1037 CYA_1039 PF04168 CYA_1039 CYA_1040 PF00132 Bacterial transferase hexapeptide (six repeats) CYA_1041 PF14403 CYA_1041 CYA_1042 PF13231 CYA_1042 CYA_1044 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CYA_1044 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CYA_1047 PF00583 Acetyltransferase (GNAT) family CYA_1048 PF01329 Pterin 4 alpha carbinolamine dehydratase CYA_1049 PF13460 NADH(P)-binding CYA_1050 PF00005 ABC transporter CYA_1051 PF13439 Glycosyltransferase Family 4 CYA_1051 PF13692 Glycosyl transferases group 1 CYA_1053 PF13398 Peptidase M50B-like CYA_1055 PF13649 Methyltransferase domain CYA_1056 PF05690 Thiazole biosynthesis protein ThiG CYA_1057 PF02597 ThiS family CYA_1058 PF01266 FAD dependent oxidoreductase CYA_1059 PF02872 5'-nucleotidase, C-terminal domain CYA_1060 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CYA_1062 PF04955 CYA_1062 CYA_1063 PF00334 Nucleoside diphosphate kinase CYA_1064 PF00005 ABC transporter CYA_1064 PF09821 CYA_1064 CYA_1065 PF00528 Binding-protein-dependent transport system inner membrane component CYA_1068 PF03055 Retinal pigment epithelial membrane protein CYA_1069 PF00448 SRP54-type protein, GTPase domain CYA_1069 PF02881 SRP54-type protein, helical bundle domain CYA_1069 PF02978 Signal peptide binding domain CYA_1071 PF00588 SpoU rRNA Methylase family CYA_1072 PF00905 Penicillin binding protein transpeptidase domain CYA_1072 PF03717 Penicillin-binding Protein dimerisation domain CYA_1073 PF00535 Glycosyl transferase family 2 CYA_1073 PF04138 CYA_1073 CYA_1074 PF01966 HD domain CYA_1074 PF07697 CYA_1074 CYA_1074 PF07698 CYA_1074 CYA_1075 PF06525 Sulfocyanin (SoxE) CYA_1076 PF01648 4'-phosphopantetheinyl transferase superfamily CYA_1077 PF03816 Cell envelope-related transcriptional attenuator domain CYA_1077 PF13399 LytR cell envelope-related transcriptional attenuator CYA_1078 PF00885 6,7-dimethyl-8-ribityllumazine synthase CYA_1079 PF00183 Hsp90 protein CYA_1079 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYA_1080 PF02366 CYA_1080 CYA_1081 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYA_1081 PF03466 LysR substrate binding domain CYA_1082 PF04244 Deoxyribodipyrimidine photo-lyase-related protein CYA_1083 PF03477 ATP cone domain CYA_1090 PF02367 Uncharacterised P-loop hydrolase UPF0079 CYA_1091 PF01790 CYA_1091 CYA_1092 PF00154 recA bacterial DNA recombination protein CYA_1093 PF00588 SpoU rRNA Methylase family CYA_1094 PF01029 NusB family CYA_1094 PF01189 NOL1/NOP2/sun family CYA_1095 PF02586 Uncharacterised ACR, COG2135 CYA_1097 PF00128 Alpha amylase, catalytic domain CYA_1097 PF01636 Phosphotransferase enzyme family CYA_1097 PF16657 CYA_1097 CYA_1098 PF09376 NurA domain CYA_1099 PF01242 6-pyruvoyl tetrahydropterin synthase CYA_1100 PF00742 Homoserine dehydrogenase CYA_1100 PF01842 ACT domain CYA_1100 PF03447 Homoserine dehydrogenase, NAD binding domain CYA_1101 PF01593 Flavin containing amine oxidoreductase CYA_1102 PF01124 MAPEG family CYA_1103 PF11805 CYA_1103 CYA_1104 PF02374 Anion-transporting ATPase CYA_1107 PF07845 CYA_1107 CYA_1108 PF00593 TonB dependent receptor CYA_1108 PF07715 TonB-dependent Receptor Plug Domain CYA_1109 PF07602 CYA_1109 CYA_1110 PF00805 Pentapeptide repeats (8 copies) CYA_1111 PF03739 CYA_1111 CYA_1112 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CYA_1112 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CYA_1113 PF01612 3'-5' exonuclease CYA_1114 PF00253 Ribosomal protein S14p/S29e CYA_1116 PF01926 50S ribosome-binding GTPase CYA_1116 PF05128 CYA_1116 CYA_1118 PF08695 CYA_1118 CYA_1120 PF01368 DHH family CYA_1120 PF02272 DHHA1 domain CYA_1122 PF00149 Calcineurin-like phosphoesterase CYA_1123 PF01507 Phosphoadenosine phosphosulfate reductase family CYA_1124 PF03992 Antibiotic biosynthesis monooxygenase CYA_1125 PF01022 Bacterial regulatory protein, arsR family CYA_1126 PF01710 Transposase CYA_1127 PF13358 DDE superfamily endonuclease CYA_1128 PF01797 Transposase IS200 like CYA_1130 PF00563 EAL domain CYA_1131 PF07690 Major Facilitator Superfamily CYA_1132 PF00753 Metallo-beta-lactamase superfamily CYA_1132 PF16123 CYA_1132 CYA_1133 PF11341 CYA_1133 CYA_1134 PF00226 DnaJ domain CYA_1135 PF01783 Ribosomal L32p protein family CYA_1136 PF01385 CYA_1136 CYA_1136 PF07282 CYA_1136 CYA_1136 PF12323 CYA_1136 CYA_1137 PF01797 Transposase IS200 like CYA_1138 PF03783 Curli production assembly/transport component CsgG CYA_1139 PF13460 NADH(P)-binding CYA_1140 PF00350 Dynamin family CYA_1142 PF08872 CYA_1142 CYA_1143 PF14279 CYA_1143 CYA_1144 PF01571 Aminomethyltransferase folate-binding domain CYA_1144 PF08669 Glycine cleavage T-protein C-terminal barrel domain CYA_1146 PF03547 CYA_1146 CYA_1148 PF02401 LytB protein CYA_1149 PF06305 CYA_1149 CYA_1150 PF00805 Pentapeptide repeats (8 copies) CYA_1151 PF00132 Bacterial transferase hexapeptide (six repeats) CYA_1151 PF03479 Domain of unknown function (DUF296) CYA_1151 PF12804 MobA-like NTP transferase domain CYA_1153 PF00355 Rieske [2Fe-2S] domain CYA_1154 PF00534 Glycosyl transferases group 1 CYA_1154 PF13439 Glycosyltransferase Family 4 CYA_1155 PF05239 PRC-barrel domain CYA_1156 PF12697 Alpha/beta hydrolase family CYA_1157 PF01176 Translation initiation factor 1A / IF-1 CYA_1158 PF00557 Metallopeptidase family M24 CYA_1159 PF00406 Adenylate kinase CYA_1160 PF00344 SecY translocase CYA_1161 PF00828 Ribosomal protein L18e/L15 CYA_1162 PF00333 Ribosomal protein S5, N-terminal domain CYA_1162 PF03719 Ribosomal protein S5, C-terminal domain CYA_1163 PF00861 Ribosomal L18p/L5e family CYA_1164 PF00347 Ribosomal protein L6 CYA_1165 PF00410 Ribosomal protein S8 CYA_1166 PF00281 Ribosomal protein L5 CYA_1166 PF00673 ribosomal L5P family C-terminus CYA_1167 PF00467 KOW motif CYA_1167 PF17136 CYA_1167 CYA_1168 PF00238 Ribosomal protein L14p/L23e CYA_1169 PF00366 Ribosomal protein S17 CYA_1170 PF00831 Ribosomal L29 protein CYA_1171 PF00252 Ribosomal protein L16p/L10e CYA_1172 PF00189 Ribosomal protein S3, C-terminal domain CYA_1172 PF07650 KH domain CYA_1173 PF00237 Ribosomal protein L22p/L17e CYA_1174 PF00203 Ribosomal protein S19 CYA_1175 PF00181 Ribosomal Proteins L2, RNA binding domain CYA_1175 PF03947 Ribosomal Proteins L2, C-terminal domain CYA_1176 PF00276 Ribosomal protein L23 CYA_1177 PF00573 Ribosomal protein L4/L1 family CYA_1178 PF00297 Ribosomal protein L3 CYA_1181 PF01385 CYA_1181 CYA_1181 PF07282 CYA_1181 CYA_1181 PF12323 CYA_1181 CYA_1186 PF00438 S-adenosylmethionine synthetase, N-terminal domain CYA_1186 PF02772 S-adenosylmethionine synthetase, central domain CYA_1186 PF02773 S-adenosylmethionine synthetase, C-terminal domain CYA_1188 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CYA_1189 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CYA_1189 PF07685 CobB/CobQ-like glutamine amidotransferase domain CYA_1190 PF08844 CYA_1190 CYA_1193 PF00574 Clp protease CYA_1194 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain CYA_1194 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain CYA_1195 PF02341 RbcX protein CYA_1196 PF00101 Ribulose bisphosphate carboxylase, small chain CYA_1197 PF01940 CYA_1197 CYA_1201 PF02562 PhoH-like protein CYA_1202 PF12146 Putative lysophospholipase CYA_1203 PF00702 haloacid dehalogenase-like hydrolase CYA_1204 PF01553 Acyltransferase CYA_1205 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CYA_1206 PF00291 Pyridoxal-phosphate dependent enzyme CYA_1208 PF00805 Pentapeptide repeats (8 copies) CYA_1209 PF00005 ABC transporter CYA_1210 PF00224 Pyruvate kinase, barrel domain CYA_1211 PF03739 CYA_1211 CYA_1212 PF12849 PBP superfamily domain CYA_1213 PF00773 RNB domain CYA_1214 PF00072 Response regulator receiver domain CYA_1214 PF00196 Bacterial regulatory proteins, luxR family CYA_1215 PF04422 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term CYA_1215 PF04432 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus CYA_1216 PF00155 Aminotransferase class I and II CYA_1217 PF01926 50S ribosome-binding GTPase CYA_1217 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CYA_1218 PF01668 SmpB protein CYA_1219 PF00043 Glutathione S-transferase, C-terminal domain CYA_1219 PF13417 Glutathione S-transferase, N-terminal domain CYA_1220 PF01926 50S ribosome-binding GTPase CYA_1220 PF07650 KH domain CYA_1221 PF08486 CYA_1221 CYA_1222 PF08848 Domain of unknown function (DUF1818) CYA_1224 PF07726 ATPase family associated with various cellular activities (AAA) CYA_1226 PF02082 Transcriptional regulator CYA_1227 PF00575 S1 RNA binding domain CYA_1228 PF00395 S-layer homology domain CYA_1229 PF06055 CYA_1229 CYA_1230 PF06386 CYA_1230 CYA_1231 PF00483 Nucleotidyl transferase CYA_1232 PF01634 ATP phosphoribosyltransferase CYA_1233 PF01716 Manganese-stabilising protein / photosystem II polypeptide CYA_1235 PF11283 CYA_1235 CYA_1236 PF03652 Uncharacterised protein family (UPF0081) CYA_1237 PF13343 Bacterial extracellular solute-binding protein CYA_1238 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CYA_1238 PF05697 Bacterial trigger factor protein (TF) CYA_1238 PF05698 Bacterial trigger factor protein (TF) C-terminus CYA_1239 PF06305 CYA_1239 CYA_1240 PF01578 CYA_1240 CYA_1242 PF01571 Aminomethyltransferase folate-binding domain CYA_1242 PF08669 Glycine cleavage T-protein C-terminal barrel domain CYA_1243 PF00140 Sigma-70 factor, region 1 CYA_1243 PF04539 Sigma-70 region 3 CYA_1243 PF04542 Sigma-70 region 2 CYA_1243 PF04545 Sigma-70, region 4 CYA_1244 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CYA_1245 PF13103 TonB C terminal CYA_1247 PF06485 CYA_1247 CYA_1249 PF13378 Enolase C-terminal domain-like CYA_1250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CYA_1251 PF14271 CYA_1251 CYA_1252 PF01590 GAF domain CYA_1252 PF13487 HD domain CYA_1253 PF01195 Peptidyl-tRNA hydrolase CYA_1254 PF01594 CYA_1254 CYA_1256 PF00133 tRNA synthetases class I (I, L, M and V) CYA_1256 PF08264 Anticodon-binding domain of tRNA CYA_1256 PF09334 tRNA synthetases class I (M) CYA_1256 PF13603 Leucyl-tRNA synthetase, Domain 2 CYA_1257 PF00175 Oxidoreductase NAD-binding domain CYA_1258 PF00485 Phosphoribulokinase / Uridine kinase family CYA_1259 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CYA_1264 PF03775 Septum formation inhibitor MinC, C-terminal domain CYA_1265 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CYA_1266 PF03776 Septum formation topological specificity factor MinE CYA_1267 PF06094 AIG2-like family CYA_1268 PF00999 Sodium/hydrogen exchanger family CYA_1269 PF02660 CYA_1269 CYA_1270 PF13177 DNA polymerase III, delta subunit CYA_1271 PF00364 Biotin-requiring enzyme CYA_1272 PF01132 Elongation factor P (EF-P) OB domain CYA_1272 PF08207 Elongation factor P (EF-P) KOW-like domain CYA_1272 PF09285 Elongation factor P, C-terminal CYA_1273 PF00814 Glycoprotease family CYA_1274 PF00124 Photosynthetic reaction centre protein CYA_1279 PF13358 DDE superfamily endonuclease CYA_1279 PF13518 Helix-turn-helix domain CYA_1280 PF00902 Sec-independent protein translocase protein (TatC) CYA_1281 PF05168 HEPN domain CYA_1282 PF00528 Binding-protein-dependent transport system inner membrane component CYA_1283 PF00528 Binding-protein-dependent transport system inner membrane component CYA_1284 PF00497 Bacterial extracellular solute-binding proteins, family 3 CYA_1285 PF00005 ABC transporter CYA_1286 PF13649 Methyltransferase domain CYA_1289 PF13358 DDE superfamily endonuclease CYA_1290 PF00290 Tryptophan synthase alpha chain CYA_1291 PF01710 Transposase CYA_1292 PF05168 HEPN domain CYA_1293 PF04851 Type III restriction enzyme, res subunit CYA_1294 PF13353 4Fe-4S single cluster domain CYA_1296 PF01145 SPFH domain / Band 7 family CYA_1297 PF01145 SPFH domain / Band 7 family CYA_1299 PF00164 Ribosomal protein S12/S23 CYA_1300 PF00177 Ribosomal protein S7p/S5e CYA_1301 PF00009 Elongation factor Tu GTP binding domain CYA_1301 PF00679 Elongation factor G C-terminus CYA_1301 PF03144 Elongation factor Tu domain 2 CYA_1301 PF03764 Elongation factor G, domain IV CYA_1301 PF14492 Elongation Factor G, domain II CYA_1302 PF00009 Elongation factor Tu GTP binding domain CYA_1302 PF03143 Elongation factor Tu C-terminal domain CYA_1302 PF03144 Elongation factor Tu domain 2 CYA_1303 PF00338 Ribosomal protein S10p/S20e CYA_1304 PF02219 Methylenetetrahydrofolate reductase CYA_1305 PF01113 Dihydrodipicolinate reductase, N-terminus CYA_1305 PF05173 Dihydrodipicolinate reductase, C-terminus CYA_1307 PF11209 CYA_1307 CYA_1308 PF01266 FAD dependent oxidoreductase CYA_1310 PF00902 Sec-independent protein translocase protein (TatC) CYA_1311 PF13358 DDE superfamily endonuclease CYA_1311 PF13518 Helix-turn-helix domain CYA_1312 PF01909 Nucleotidyltransferase domain CYA_1316 PF03772 CYA_1316 CYA_1316 PF13567 CYA_1316 CYA_1318 PF01478 Type IV leader peptidase family CYA_1318 PF06750 CYA_1318 CYA_1319 PF02514 CYA_1319 CYA_1319 PF11965 CYA_1319 CYA_1321 PF00580 UvrD/REP helicase N-terminal domain CYA_1321 PF13361 UvrD-like helicase C-terminal domain CYA_1324 PF01678 Diaminopimelate epimerase CYA_1325 PF02468 CYA_1325 CYA_1326 PF00737 Photosystem II 10 kDa phosphoprotein CYA_1327 PF01960 ArgJ family CYA_1328 PF00005 ABC transporter CYA_1329 PF00528 Binding-protein-dependent transport system inner membrane component CYA_1331 PF00027 Cyclic nucleotide-binding domain CYA_1331 PF13545 Crp-like helix-turn-helix domain CYA_1332 PF01636 Phosphotransferase enzyme family CYA_1332 PF13671 AAA domain CYA_1334 PF08240 Alcohol dehydrogenase GroES-like domain CYA_1334 PF13602 Zinc-binding dehydrogenase CYA_1337 PF00502 Phycobilisome protein CYA_1338 PF01509 TruB family pseudouridylate synthase (N terminal domain) CYA_1338 PF09157 Pseudouridine synthase II TruB, C-terminal CYA_1338 PF16198 CYA_1338 CYA_1339 PF00892 EamA-like transporter family CYA_1340 PF00579 tRNA synthetases class I (W and Y) CYA_1341 PF12095 Protein of unknown function (DUF3571) CYA_1342 PF00515 Tetratricopeptide repeat CYA_1342 PF13176 Tetratricopeptide repeat CYA_1343 PF02686 Glu-tRNAGln amidotransferase C subunit CYA_1346 PF01179 Copper amine oxidase, enzyme domain CYA_1346 PF02727 Copper amine oxidase, N2 domain CYA_1346 PF02728 Copper amine oxidase, N3 domain CYA_1349 PF00512 His Kinase A (phospho-acceptor) domain CYA_1349 PF01590 GAF domain CYA_1349 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYA_1349 PF08447 PAS fold CYA_1349 PF08448 PAS fold CYA_1349 PF13185 GAF domain CYA_1353 PF08245 Mur ligase middle domain CYA_1354 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CYA_1354 PF01842 ACT domain CYA_1354 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CYA_1355 PF11347 CYA_1355 CYA_1358 PF01710 Transposase CYA_1359 PF12323 CYA_1359 CYA_1360 PF13358 DDE superfamily endonuclease CYA_1361 PF00586 AIR synthase related protein, N-terminal domain CYA_1361 PF02769 AIR synthase related protein, C-terminal domain CYA_1362 PF00085 Thioredoxin CYA_1362 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYA_1363 PF00120 Glutamine synthetase, catalytic domain CYA_1363 PF03951 Glutamine synthetase, beta-Grasp domain CYA_1365 PF00106 short chain dehydrogenase CYA_1366 PF00582 Universal stress protein family CYA_1366 PF00999 Sodium/hydrogen exchanger family CYA_1368 PF02132 RecR protein CYA_1368 PF13662 Toprim domain CYA_1369 PF02575 YbaB/EbfC DNA-binding family CYA_1370 PF00528 Binding-protein-dependent transport system inner membrane component CYA_1371 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CYA_1372 PF03600 Citrate transporter CYA_1374 PF00239 Resolvase, N terminal domain CYA_1374 PF13411 MerR HTH family regulatory protein CYA_1375 PF07282 CYA_1375 CYA_1375 PF12323 CYA_1375 CYA_1380 PF01947 Protein of unknown function (DUF98) CYA_1381 PF13767 CYA_1381 CYA_1382 PF05145 CYA_1382 CYA_1383 PF01475 Ferric uptake regulator family CYA_1384 PF08855 CYA_1384 CYA_1385 PF02617 ATP-dependent Clp protease adaptor protein ClpS CYA_1389 PF01872 RibD C-terminal domain CYA_1391 PF10929 CYA_1391 CYA_1392 PF00072 Response regulator receiver domain CYA_1392 PF00486 Transcriptional regulatory protein, C terminal CYA_1393 PF13414 TPR repeat CYA_1393 PF13432 Tetratricopeptide repeat CYA_1393 PF14559 Tetratricopeptide repeat CYA_1394 PF02565 Recombination protein O C terminal CYA_1394 PF11967 Recombination protein O N terminal CYA_1395 PF01791 DeoC/LacD family aldolase CYA_1396 PF12732 CYA_1396 CYA_1398 PF09334 tRNA synthetases class I (M) CYA_1399 PF12831 FAD dependent oxidoreductase CYA_1401 PF05673 Protein of unknown function (DUF815) CYA_1402 PF11267 Protein of unknown function (DUF3067) CYA_1403 PF00355 Rieske [2Fe-2S] domain CYA_1403 PF08802 Cytochrome B6-F complex Fe-S subunit CYA_1404 PF01333 Apocytochrome F, C-terminal CYA_1404 PF16639 CYA_1404 CYA_1405 PF02567 Phenazine biosynthesis-like protein CYA_1406 PF00166 Chaperonin 10 Kd subunit CYA_1407 PF00118 TCP-1/cpn60 chaperonin family CYA_1408 PF04250 CYA_1408 CYA_1409 PF00478 IMP dehydrogenase / GMP reductase domain CYA_1411 PF00395 S-layer homology domain CYA_1411 PF04966 Carbohydrate-selective porin, OprB family CYA_1412 PF00395 S-layer homology domain CYA_1412 PF04966 Carbohydrate-selective porin, OprB family CYA_1414 PF00916 CYA_1414 CYA_1414 PF01740 STAS domain CYA_1415 PF00521 DNA gyrase/topoisomerase IV, subunit A CYA_1415 PF03989 DNA gyrase C-terminal domain, beta-propeller CYA_1416 PF05542 CYA_1416 CYA_1417 PF02595 Glycerate kinase family CYA_1418 PF03912 Psb28 protein CYA_1419 PF01425 Amidase CYA_1423 PF05685 Putative restriction endonuclease CYA_1426 PF00111 2Fe-2S iron-sulfur cluster binding domain CYA_1431 PF00805 Pentapeptide repeats (8 copies) CYA_1437 PF13847 Methyltransferase domain CYA_1438 PF07282 CYA_1438 CYA_1438 PF12323 CYA_1438 CYA_1439 PF00239 Resolvase, N terminal domain CYA_1439 PF13411 MerR HTH family regulatory protein CYA_1441 PF00005 ABC transporter CYA_1442 PF00011 Hsp20/alpha crystallin family CYA_1444 PF00330 Aconitase family (aconitate hydratase) CYA_1444 PF06434 Aconitate hydratase 2 N-terminus CYA_1444 PF11791 Aconitate B N-terminal domain CYA_1445 PF00472 RF-1 domain CYA_1445 PF03462 PCRF domain CYA_1446 PF01197 Ribosomal protein L31 CYA_1447 PF00380 Ribosomal protein S9/S16 CYA_1448 PF00572 Ribosomal protein L13 CYA_1449 PF01416 tRNA pseudouridine synthase CYA_1450 PF01196 Ribosomal protein L17 CYA_1451 PF01000 RNA polymerase Rpb3/RpoA insert domain CYA_1451 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CYA_1451 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CYA_1452 PF00411 Ribosomal protein S11 CYA_1453 PF00416 Ribosomal protein S13/S18 CYA_1454 PF00444 Ribosomal protein L36 CYA_1455 PF13620 Carboxypeptidase regulatory-like domain CYA_1456 PF13620 Carboxypeptidase regulatory-like domain CYA_1457 PF02366 CYA_1457 CYA_1457 PF16192 CYA_1457 CYA_1458 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CYA_1459 PF01925 CYA_1459 CYA_1460 PF00800 Prephenate dehydratase CYA_1460 PF01842 ACT domain CYA_1461 PF10719 CYA_1461 CYA_1462 PF00842 Alanine racemase, C-terminal domain CYA_1462 PF01168 Alanine racemase, N-terminal domain CYA_1463 PF01343 Peptidase family S49 CYA_1466 PF00270 DEAD/DEAH box helicase CYA_1466 PF00271 Helicase conserved C-terminal domain CYA_1467 PF00180 Isocitrate/isopropylmalate dehydrogenase CYA_1468 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CYA_1470 PF09992 Predicted periplasmic protein (DUF2233) CYA_1471 PF07282 CYA_1471 CYA_1471 PF12323 CYA_1471 CYA_1472 PF00239 Resolvase, N terminal domain CYA_1472 PF13411 MerR HTH family regulatory protein CYA_1473 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CYA_1474 PF00692 dUTPase CYA_1475 PF13419 Haloacid dehalogenase-like hydrolase CYA_1476 PF02547 Queuosine biosynthesis protein CYA_1477 PF00248 Aldo/keto reductase family CYA_1479 PF00117 Glutamine amidotransferase class-I CYA_1479 PF06418 CTP synthase N-terminus CYA_1481 PF06146 CYA_1481 CYA_1482 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CYA_1483 PF00741 CYA_1483 CYA_1483 PF05121 CYA_1483 CYA_1484 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains CYA_1485 PF02392 CYA_1485 CYA_1486 PF00395 S-layer homology domain CYA_1487 PF11378 CYA_1487 CYA_1489 PF13490 Putative zinc-finger CYA_1490 PF04542 Sigma-70 region 2 CYA_1490 PF08281 Sigma-70, region 4 CYA_1491 PF00027 Cyclic nucleotide-binding domain CYA_1491 PF13545 Crp-like helix-turn-helix domain CYA_1492 PF04248 Domain of unknown function (DUF427) CYA_1495 PF02361 Cobalt transport protein CYA_1496 PF03358 NADPH-dependent FMN reductase CYA_1500 PF01116 Fructose-bisphosphate aldolase class-II CYA_1503 PF01592 NifU-like N terminal domain CYA_1504 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CYA_1505 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CYA_1507 PF00909 Ammonium Transporter Family CYA_1508 PF00543 Nitrogen regulatory protein P-II CYA_1509 PF04932 CYA_1509 CYA_1511 PF06144 DNA polymerase III, delta subunit CYA_1512 PF00510 Cytochrome c oxidase subunit III CYA_1513 PF00115 Cytochrome C and Quinol oxidase polypeptide I CYA_1514 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CYA_1514 PF02790 Cytochrome C oxidase subunit II, transmembrane domain CYA_1515 PF02628 CYA_1515 CYA_1517 PF01040 UbiA prenyltransferase family CYA_1518 PF02321 Outer membrane efflux protein CYA_1519 PF00163 Ribosomal protein S4/S9 N-terminal domain CYA_1519 PF01479 S4 domain CYA_1520 PF16363 CYA_1520 CYA_1521 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CYA_1523 PF00204 DNA gyrase B CYA_1523 PF00986 DNA gyrase B subunit, carboxyl terminus CYA_1523 PF01751 Toprim domain CYA_1523 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYA_1524 PF13393 Histidyl-tRNA synthetase CYA_1525 PF01782 RimM N-terminal domain CYA_1525 PF05239 PRC-barrel domain CYA_1526 PF01145 SPFH domain / Band 7 family CYA_1528 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYA_1529 PF01522 Polysaccharide deacetylase CYA_1531 PF01551 Peptidase family M23 CYA_1532 PF04240 CYA_1532 CYA_1533 PF01252 CYA_1533 CYA_1535 PF01583 Adenylylsulphate kinase CYA_1537 PF00202 Aminotransferase class-III CYA_1538 PF02633 Creatinine amidohydrolase CYA_1539 PF05685 Putative restriction endonuclease CYA_1540 PF05685 Putative restriction endonuclease CYA_1541 PF13545 Crp-like helix-turn-helix domain CYA_1542 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CYA_1543 PF01380 SIS domain CYA_1543 PF13522 Glutamine amidotransferase domain CYA_1544 PF00376 MerR family regulatory protein CYA_1544 PF09278 MerR, DNA binding CYA_1545 PF02470 CYA_1545 CYA_1547 PF03741 CYA_1547 CYA_1548 PF00731 AIR carboxylase CYA_1549 PF00582 Universal stress protein family CYA_1550 PF00772 DnaB-like helicase N terminal domain CYA_1550 PF03796 DnaB-like helicase C terminal domain CYA_1551 PF01281 Ribosomal protein L9, N-terminal domain CYA_1551 PF03948 Ribosomal protein L9, C-terminal domain CYA_1552 PF12849 PBP superfamily domain CYA_1553 PF00528 Binding-protein-dependent transport system inner membrane component CYA_1554 PF00528 Binding-protein-dependent transport system inner membrane component CYA_1555 PF00005 ABC transporter CYA_1556 PF01479 S4 domain CYA_1556 PF01728 FtsJ-like methyltransferase CYA_1559 PF01747 ATP-sulfurylase CYA_1559 PF14306 PUA-like domain CYA_1561 PF13614 AAA domain CYA_1562 PF00483 Nucleotidyl transferase CYA_1563 PF03109 CYA_1563 CYA_1565 PF02325 CYA_1565 CYA_1567 PF07969 Amidohydrolase family CYA_1569 PF02581 Thiamine monophosphate synthase/TENI CYA_1570 PF00004 ATPase family associated with various cellular activities (AAA) CYA_1573 PF01230 HIT domain CYA_1574 PF02570 Precorrin-8X methylmutase CYA_1576 PF00258 Flavodoxin CYA_1576 PF00753 Metallo-beta-lactamase superfamily CYA_1576 PF01613 Flavin reductase like domain CYA_1577 PF01926 50S ribosome-binding GTPase CYA_1577 PF13167 CYA_1577 CYA_1577 PF16360 CYA_1577 CYA_1579 PF04343 CYA_1579 CYA_1581 PF02653 CYA_1581 CYA_1582 PF02653 CYA_1582 CYA_1583 PF00005 ABC transporter CYA_1584 PF02608 Basic membrane protein CYA_1585 PF01385 CYA_1585 CYA_1585 PF07282 CYA_1585 CYA_1587 PF07969 Amidohydrolase family CYA_1588 PF01812 5-formyltetrahydrofolate cyclo-ligase family CYA_1589 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CYA_1591 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CYA_1591 PF01890 Cobalamin synthesis G C-terminus CYA_1591 PF11760 Cobalamin synthesis G N-terminal CYA_1591 PF11761 CYA_1591 CYA_1593 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains CYA_1593 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CYA_1594 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains CYA_1595 PF10216 CYA_1595 CYA_1597 PF00266 Aminotransferase class-V CYA_1598 PF02811 PHP domain CYA_1599 PF02080 TrkA-C domain CYA_1599 PF02254 TrkA-N domain CYA_1599 PF07885 Ion channel CYA_1600 PF11211 CYA_1600 CYA_1602 PF00127 Copper binding proteins, plastocyanin/azurin family CYA_1604 PF13358 DDE superfamily endonuclease CYA_1604 PF13518 Helix-turn-helix domain CYA_1607 PF11910 CYA_1607 CYA_1608 PF08478 POTRA domain, FtsQ-type CYA_1609 PF00005 ABC transporter CYA_1611 PF00936 BMC domain CYA_1612 PF00936 BMC domain CYA_1613 PF03319 Ethanolamine utilisation protein EutN/carboxysome CYA_1614 PF00101 Ribulose bisphosphate carboxylase, small chain CYA_1614 PF00132 Bacterial transferase hexapeptide (six repeats) CYA_1616 PF00936 BMC domain CYA_1619 PF01245 Ribosomal protein L19 CYA_1620 PF13533 Biotin-lipoyl like CYA_1620 PF16576 CYA_1620 CYA_1621 PF02687 CYA_1621 CYA_1621 PF12704 MacB-like periplasmic core domain CYA_1622 PF00288 GHMP kinases N terminal domain CYA_1622 PF08544 GHMP kinases C terminal CYA_1623 PF01219 Prokaryotic diacylglycerol kinase CYA_1624 PF02130 Uncharacterized protein family UPF0054 CYA_1625 PF01081 KDPG and KHG aldolase CYA_1626 PF00005 ABC transporter CYA_1627 PF01551 Peptidase family M23 CYA_1629 PF01451 Low molecular weight phosphotyrosine protein phosphatase CYA_1630 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CYA_1631 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CYA_1632 PF04536 TLP18 CYA_1633 PF03099 Biotin/lipoate A/B protein ligase family CYA_1634 PF10722 Putative bacterial sensory transduction regulator CYA_1636 PF01048 Phosphorylase superfamily CYA_1638 PF00318 Ribosomal protein S2 CYA_1639 PF00889 Elongation factor TS CYA_1640 PF01979 Amidohydrolase family CYA_1641 PF08331 CYA_1641 CYA_1641 PF13484 CYA_1641 CYA_1642 PF07282 CYA_1642 CYA_1645 PF00239 Resolvase, N terminal domain CYA_1645 PF13411 MerR HTH family regulatory protein CYA_1646 PF07282 CYA_1646 CYA_1646 PF12323 CYA_1646 CYA_1647 PF00712 DNA polymerase III beta subunit, N-terminal domain CYA_1647 PF02767 DNA polymerase III beta subunit, central domain CYA_1647 PF02768 DNA polymerase III beta subunit, C-terminal domain CYA_1650 PF01207 Dihydrouridine synthase (Dus) CYA_1651 PF01084 Ribosomal protein S18 CYA_1652 PF00471 Ribosomal protein L33 CYA_1653 PF06271 CYA_1653 CYA_1654 PF12706 Beta-lactamase superfamily domain CYA_1655 PF01521 Iron-sulphur cluster biosynthesis CYA_1656 PF00072 Response regulator receiver domain CYA_1656 PF00512 His Kinase A (phospho-acceptor) domain CYA_1656 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYA_1657 PF00072 Response regulator receiver domain CYA_1657 PF00512 His Kinase A (phospho-acceptor) domain CYA_1657 PF01627 Hpt domain CYA_1657 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYA_1657 PF08447 PAS fold CYA_1657 PF08448 PAS fold CYA_1657 PF13188 PAS domain CYA_1658 PF00122 E1-E2 ATPase CYA_1658 PF00689 Cation transporting ATPase, C-terminus CYA_1658 PF00690 Cation transporter/ATPase, N-terminus CYA_1658 PF00702 haloacid dehalogenase-like hydrolase CYA_1659 PF01613 Flavin reductase like domain CYA_1660 PF05277 CYA_1660 CYA_1661 PF01710 Transposase CYA_1662 PF13358 DDE superfamily endonuclease CYA_1663 PF00300 Histidine phosphatase superfamily (branch 1) CYA_1664 PF01979 Amidohydrolase family CYA_1665 PF03631 CYA_1665 CYA_1666 PF01300 Telomere recombination CYA_1666 PF03481 Putative GTP-binding controlling metal-binding CYA_1667 PF00731 AIR carboxylase CYA_1669 PF02492 CobW/HypB/UreG, nucleotide-binding domain CYA_1669 PF07683 Cobalamin synthesis protein cobW C-terminal domain CYA_1673 PF00117 Glutamine amidotransferase class-I CYA_1673 PF00958 GMP synthase C terminal domain CYA_1673 PF02540 NAD synthase CYA_1675 PF02527 rRNA small subunit methyltransferase G CYA_1677 PF00076 RNA recognition motif CYA_1678 PF00950 CYA_1678 CYA_1679 PF00005 ABC transporter CYA_1680 PF01297 Periplasmic solute binding protein family CYA_1681 PF00152 tRNA synthetases class II (D, K and N) CYA_1681 PF01336 OB-fold nucleic acid binding domain CYA_1681 PF02938 GAD domain CYA_1682 PF13561 Enoyl-(Acyl carrier protein) reductase CYA_1683 PF01594 CYA_1683 CYA_1684 PF00884 Sulfatase CYA_1686 PF14495 Cytochrome c-550 domain CYA_1687 PF14495 Cytochrome c-550 domain CYA_1688 PF08547 Complex I intermediate-associated protein 30 (CIA30) CYA_1689 PF02366 CYA_1689 CYA_1690 PF04002 RadC-like JAB domain CYA_1691 PF00551 Formyl transferase CYA_1691 PF02911 Formyl transferase, C-terminal domain CYA_1693 PF00571 CBS domain CYA_1693 PF01769 Divalent cation transporter CYA_1693 PF03448 MgtE intracellular N domain CYA_1694 PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase CYA_1695 PF09852 CYA_1695 CYA_1696 PF05787 Bacterial protein of unknown function (DUF839) CYA_1697 PF00920 Dehydratase family CYA_1698 PF00316 Fructose-1-6-bisphosphatase CYA_1699 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CYA_1699 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CYA_1700 PF07719 Tetratricopeptide repeat CYA_1700 PF13432 Tetratricopeptide repeat CYA_1701 PF02779 Transketolase, pyrimidine binding domain CYA_1701 PF02780 Transketolase, C-terminal domain CYA_1701 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CYA_1702 PF00291 Pyridoxal-phosphate dependent enzyme CYA_1703 PF00133 tRNA synthetases class I (I, L, M and V) CYA_1703 PF06827 Zinc finger found in FPG and IleRS CYA_1703 PF08264 Anticodon-binding domain of tRNA CYA_1705 PF00581 Rhodanese-like domain CYA_1706 PF00557 Metallopeptidase family M24 CYA_1706 PF01321 Creatinase/Prolidase N-terminal domain CYA_1706 PF16188 CYA_1706 CYA_1706 PF16189 CYA_1706 CYA_1709 PF00155 Aminotransferase class I and II CYA_1712 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CYA_1715 PF02578 Multi-copper polyphenol oxidoreductase laccase CYA_1716 PF11317 CYA_1716 CYA_1717 PF01758 Sodium Bile acid symporter family CYA_1718 PF01022 Bacterial regulatory protein, arsR family CYA_1719 PF02656 CYA_1719 CYA_1720 PF00753 Metallo-beta-lactamase superfamily CYA_1721 PF01724 Domain of unknown function DUF29 CYA_1722 PF00581 Rhodanese-like domain CYA_1722 PF11127 Protein of unknown function (DUF2892) CYA_1724 PF00916 CYA_1724 CYA_1724 PF01740 STAS domain CYA_1725 PF00085 Thioredoxin CYA_1726 PF13371 Tetratricopeptide repeat CYA_1727 PF03099 Biotin/lipoate A/B protein ligase family CYA_1728 PF05685 Putative restriction endonuclease CYA_1729 PF00206 Lyase CYA_1729 PF10397 Adenylosuccinate lyase C-terminus CYA_1730 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CYA_1730 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CYA_1732 PF12849 PBP superfamily domain CYA_1733 PF00528 Binding-protein-dependent transport system inner membrane component CYA_1734 PF00528 Binding-protein-dependent transport system inner membrane component CYA_1735 PF00005 ABC transporter CYA_1736 PF01565 FAD binding domain CYA_1737 PF01724 Domain of unknown function DUF29 CYA_1738 PF03773 CYA_1738 CYA_1739 PF00285 Citrate synthase CYA_1740 PF05991 CYA_1740 CYA_1741 PF03109 CYA_1741 CYA_1744 PF05421 CYA_1744 CYA_1745 PF08369 Proto-chlorophyllide reductase 57 kD subunit CYA_1746 PF02163 Peptidase family M50 CYA_1747 PF00696 Amino acid kinase family CYA_1747 PF01842 ACT domain CYA_1747 PF13840 ACT domain CYA_1748 PF00124 Photosynthetic reaction centre protein CYA_1749 PF02142 MGS-like domain CYA_1749 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CYA_1749 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CYA_1750 PF04039 CYA_1750 CYA_1751 PF13244 CYA_1751 CYA_1752 PF03334 CYA_1752 CYA_1754 PF01899 CYA_1754 CYA_1755 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains CYA_1756 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CYA_1758 PF01047 MarR family CYA_1760 PF05154 CYA_1760 CYA_1761 PF01061 CYA_1761 CYA_1762 PF00005 ABC transporter CYA_1763 PF00270 DEAD/DEAH box helicase CYA_1763 PF00271 Helicase conserved C-terminal domain CYA_1763 PF02559 CarD-like/TRCF domain CYA_1763 PF03461 TRCF domain CYA_1763 PF14814 Bifunctional transglycosylase second domain CYA_1764 PF01654 CYA_1764 CYA_1766 PF02322 CYA_1766 CYA_1767 PF05552 Conserved TM helix CYA_1768 PF00583 Acetyltransferase (GNAT) family CYA_1770 PF02222 ATP-grasp domain CYA_1772 PF00239 Resolvase, N terminal domain CYA_1772 PF13411 MerR HTH family regulatory protein CYA_1773 PF07282 CYA_1773 CYA_1773 PF12323 CYA_1773 CYA_1775 PF01746 tRNA (Guanine-1)-methyltransferase CYA_1777 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CYA_1778 PF00467 KOW motif CYA_1778 PF02357 Transcription termination factor nusG CYA_1779 PF00298 Ribosomal protein L11, RNA binding domain CYA_1779 PF03946 Ribosomal protein L11, N-terminal domain CYA_1780 PF00687 Ribosomal protein L1p/L10e family CYA_1782 PF00466 Ribosomal protein L10 CYA_1784 PF00542 Ribosomal protein L7/L12 C-terminal domain CYA_1784 PF16320 CYA_1784 CYA_1785 PF02096 60Kd inner membrane protein CYA_1786 PF01424 R3H domain CYA_1787 PF02620 CYA_1787 CYA_1788 PF01040 UbiA prenyltransferase family CYA_1789 PF01479 S4 domain CYA_1791 PF01968 Hydantoinase/oxoprolinase CYA_1791 PF05378 CYA_1791 CYA_1794 PF09367 CpeS-like protein CYA_1795 PF00595 PDZ domain (Also known as DHR or GLGF) CYA_1795 PF03572 Peptidase family S41 CYA_1796 PF00033 Cytochrome b(N-terminal)/b6/petB CYA_1797 PF00032 Cytochrome b(C-terminal)/b6/petD CYA_1798 PF00180 Isocitrate/isopropylmalate dehydrogenase CYA_1799 PF00027 Cyclic nucleotide-binding domain CYA_1799 PF13545 Crp-like helix-turn-helix domain CYA_1800 PF05299 M61 glycyl aminopeptidase CYA_1800 PF13180 PDZ domain CYA_1803 PF14681 Uracil phosphoribosyltransferase CYA_1804 PF08282 haloacid dehalogenase-like hydrolase CYA_1805 PF13414 TPR repeat CYA_1806 PF00226 DnaJ domain CYA_1808 PF09876 CYA_1808 CYA_1809 PF04459 CYA_1809 CYA_1810 PF03699 CYA_1810 CYA_1811 PF00124 Photosynthetic reaction centre protein CYA_1812 PF05491 Holliday junction DNA helicase ruvB C-terminus CYA_1812 PF05496 Holliday junction DNA helicase ruvB N-terminus CYA_1814 PF00427 Phycobilisome Linker polypeptide CYA_1814 PF00502 Phycobilisome protein CYA_1816 PF04577 CYA_1816 CYA_1817 PF07690 Major Facilitator Superfamily CYA_1818 PF06988 NifT/FixU protein CYA_1819 PF04319 CYA_1819 CYA_1820 PF00682 HMGL-like CYA_1821 PF00148 Nitrogenase component 1 type Oxidoreductase CYA_1821 PF11844 Domain of unknown function (DUF3364) CYA_1823 PF00148 Nitrogenase component 1 type Oxidoreductase CYA_1824 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family CYA_1825 PF01106 NifU-like domain CYA_1825 PF01592 NifU-like N terminal domain CYA_1825 PF04324 BFD-like [2Fe-2S] binding domain CYA_1826 PF00266 Aminotransferase class-V CYA_1827 PF12838 4Fe-4S dicluster domain CYA_1828 PF02579 Dinitrogenase iron-molybdenum cofactor CYA_1828 PF04055 Radical SAM superfamily CYA_1831 PF00210 Ferritin-like domain CYA_1832 PF11165 CYA_1832 CYA_1833 PF06967 CYA_1833 CYA_1834 PF00148 Nitrogenase component 1 type Oxidoreductase CYA_1835 PF00148 Nitrogenase component 1 type Oxidoreductase CYA_1836 PF02579 Dinitrogenase iron-molybdenum cofactor CYA_1837 PF03270 Protein of unknown function, DUF269 CYA_1838 PF05082 Rop-like CYA_1839 PF03206 CYA_1839 CYA_1840 PF00111 2Fe-2S iron-sulfur cluster binding domain CYA_1841 PF04023 FeoA domain CYA_1843 PF00037 4Fe-4S binding domain CYA_1843 PF13560 Helix-turn-helix domain CYA_1844 PF03459 TOBE domain CYA_1845 PF13531 Bacterial extracellular solute-binding protein CYA_1846 PF00005 ABC transporter CYA_1846 PF00528 Binding-protein-dependent transport system inner membrane component CYA_1847 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CYA_1847 PF01890 Cobalamin synthesis G C-terminus CYA_1847 PF11760 Cobalamin synthesis G N-terminal CYA_1847 PF11761 CYA_1847 CYA_1848 PF03699 CYA_1848 CYA_1849 PF00124 Photosynthetic reaction centre protein CYA_1850 PF05491 Holliday junction DNA helicase ruvB C-terminus CYA_1850 PF05496 Holliday junction DNA helicase ruvB N-terminus CYA_1851 PF00427 Phycobilisome Linker polypeptide CYA_1851 PF00502 Phycobilisome protein CYA_1852 PF04577 CYA_1852 CYA_1854 PF00515 Tetratricopeptide repeat CYA_1854 PF13432 Tetratricopeptide repeat CYA_1854 PF13844 Glycosyl transferase family 41 CYA_1855 PF01497 Periplasmic binding protein CYA_1857 PF01593 Flavin containing amine oxidoreductase CYA_1858 PF00528 Binding-protein-dependent transport system inner membrane component CYA_1859 PF00005 ABC transporter CYA_1859 PF08402 TOBE domain CYA_1860 PF12705 PD-(D/E)XK nuclease superfamily CYA_1862 PF01765 Ribosome recycling factor CYA_1863 PF00571 CBS domain CYA_1863 PF01368 DHH family CYA_1863 PF01743 Poly A polymerase head domain CYA_1863 PF12627 Probable RNA and SrmB- binding site of polymerase A CYA_1864 PF01435 Peptidase family M48 CYA_1866 PF01761 3-dehydroquinate synthase CYA_1867 PF01118 Semialdehyde dehydrogenase, NAD binding domain CYA_1867 PF02774 Semialdehyde dehydrogenase, dimerisation domain CYA_1869 PF02535 CYA_1869 CYA_1870 PF12204 Domain of unknown function (DUF3598) CYA_1871 PF12146 Putative lysophospholipase CYA_1875 PF01565 FAD binding domain CYA_1875 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CYA_1876 PF01225 Mur ligase family, catalytic domain CYA_1876 PF02875 Mur ligase family, glutamate ligase domain CYA_1876 PF08245 Mur ligase middle domain CYA_1877 PF16576 CYA_1877 CYA_1878 PF02687 CYA_1878 CYA_1878 PF12704 MacB-like periplasmic core domain CYA_1879 PF01370 NAD dependent epimerase/dehydratase family CYA_1880 PF00005 ABC transporter CYA_1881 PF01411 tRNA synthetases class II (A) CYA_1881 PF02272 DHHA1 domain CYA_1881 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CYA_1882 PF00069 Protein kinase domain CYA_1882 PF00805 Pentapeptide repeats (8 copies) CYA_1885 PF00155 Aminotransferase class I and II CYA_1888 PF00011 Hsp20/alpha crystallin family CYA_1889 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase CYA_1890 PF07282 CYA_1890 CYA_1890 PF12323 CYA_1890 CYA_1891 PF00239 Resolvase, N terminal domain CYA_1891 PF13411 MerR HTH family regulatory protein CYA_1892 PF00072 Response regulator receiver domain CYA_1892 PF00486 Transcriptional regulatory protein, C terminal CYA_1893 PF00005 ABC transporter CYA_1893 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CYA_1894 PF08495 CYA_1894 CYA_1894 PF10442 CYA_1894 CYA_1895 PF01476 LysM domain CYA_1895 PF01551 Peptidase family M23 CYA_1896 PF01406 tRNA synthetases class I (C) catalytic domain CYA_1896 PF09190 DALR domain CYA_1897 PF00450 Serine carboxypeptidase CYA_1899 PF00586 AIR synthase related protein, N-terminal domain CYA_1899 PF02769 AIR synthase related protein, C-terminal domain CYA_1900 PF06745 KaiC CYA_1901 PF07689 KaiB domain CYA_1902 PF07688 KaiA domain CYA_1903 PF01156 Inosine-uridine preferring nucleoside hydrolase CYA_1904 PF01066 CDP-alcohol phosphatidyltransferase CYA_1905 PF02075 Crossover junction endodeoxyribonuclease RuvC CYA_1906 PF02190 ATP-dependent protease La (LON) domain CYA_1907 PF00756 Putative esterase CYA_1909 PF04339 CYA_1909 CYA_1910 PF00072 Response regulator receiver domain CYA_1910 PF00196 Bacterial regulatory proteins, luxR family CYA_1911 PF01694 Rhomboid family CYA_1912 PF05685 Putative restriction endonuclease CYA_1913 PF01797 Transposase IS200 like CYA_1915 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains CYA_1916 PF00962 Adenosine/AMP deaminase CYA_1917 PF00581 Rhodanese-like domain CYA_1918 PF00857 Isochorismatase family CYA_1919 PF00005 ABC transporter CYA_1920 PF00005 ABC transporter CYA_1921 PF00005 ABC transporter CYA_1921 PF12399 Branched-chain amino acid ATP-binding cassette transporter CYA_1922 PF02653 CYA_1922 CYA_1923 PF02653 CYA_1923 CYA_1924 PF10518 TAT (twin-arginine translocation) pathway signal sequence CYA_1924 PF13433 Periplasmic binding protein domain CYA_1925 PF00326 Prolyl oligopeptidase family CYA_1926 PF01464 Transglycosylase SLT domain CYA_1926 PF13174 Tetratricopeptide repeat CYA_1926 PF13432 Tetratricopeptide repeat CYA_1927 PF11282 CYA_1927 CYA_1928 PF01972 Serine dehydrogenase proteinase CYA_1929 PF00226 DnaJ domain CYA_1931 PF00487 CYA_1931 CYA_1932 PF01241 Photosystem I psaG / psaK CYA_1933 PF02533 Photosystem II 4 kDa reaction centre component CYA_1934 PF12263 CYA_1934 CYA_1935 PF13767 CYA_1935 CYA_1936 PF01078 Magnesium chelatase, subunit ChlI CYA_1937 PF00239 Resolvase, N terminal domain CYA_1937 PF13411 MerR HTH family regulatory protein CYA_1938 PF07282 CYA_1938 CYA_1938 PF12323 CYA_1938 CYA_1939 PF11152 CYA_1939 CYA_1940 PF00565 Staphylococcal nuclease homologue CYA_1941 PF01837 CYA_1941 CYA_1942 PF00149 Calcineurin-like phosphoesterase CYA_1943 PF01789 PsbP CYA_1944 PF02824 TGS domain CYA_1944 PF04607 Region found in RelA / SpoT proteins CYA_1944 PF13291 ACT domain CYA_1944 PF13328 HD domain CYA_1945 PF01926 50S ribosome-binding GTPase CYA_1946 PF00111 2Fe-2S iron-sulfur cluster binding domain CYA_1947 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CYA_1947 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CYA_1948 PF03109 CYA_1948 CYA_1949 PF00578 AhpC/TSA family CYA_1950 PF10604 Polyketide cyclase / dehydrase and lipid transport CYA_1953 PF00588 SpoU rRNA Methylase family CYA_1955 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CYA_1956 PF01385 CYA_1956 CYA_1956 PF07282 CYA_1956 CYA_1956 PF12323 CYA_1956 CYA_1957 PF07977 FabA-like domain CYA_1958 PF01797 Transposase IS200 like CYA_1959 PF01385 CYA_1959 CYA_1959 PF07282 CYA_1959 CYA_1959 PF12323 CYA_1959 CYA_1960 PF00132 Bacterial transferase hexapeptide (six repeats) CYA_1960 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CYA_1961 PF02684 CYA_1961 CYA_1962 PF07755 Protein of unknown function (DUF1611) CYA_1962 PF17396 CYA_1962 CYA_1963 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CYA_1963 PF13378 Enolase C-terminal domain-like CYA_1964 PF00205 Thiamine pyrophosphate enzyme, central domain CYA_1964 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CYA_1964 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CYA_1965 PF00437 Type II/IV secretion system protein CYA_1965 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CYA_1966 PF00437 Type II/IV secretion system protein CYA_1967 PF00482 Type II secretion system (T2SS), protein F CYA_1968 PF00207 Alpha-2-macroglobulin family CYA_1968 PF01835 MG2 domain CYA_1968 PF07703 Alpha-2-macroglobulin family N-terminal region CYA_1968 PF10569 Alpha-macro-globulin thiol-ester bond-forming region CYA_1968 PF13620 Carboxypeptidase regulatory-like domain CYA_1969 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CYA_1969 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CYA_1969 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CYA_1969 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CYA_1971 PF12697 Alpha/beta hydrolase family CYA_1973 PF03065 Glycosyl hydrolase family 57 CYA_1973 PF12055 CYA_1973 CYA_1974 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CYA_1974 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CYA_1975 PF02609 Exonuclease VII small subunit CYA_1976 PF02601 CYA_1976 CYA_1976 PF13742 CYA_1976 CYA_1977 PF01385 CYA_1977 CYA_1977 PF07282 CYA_1977 CYA_1977 PF12323 CYA_1977 CYA_1978 PF01594 CYA_1978 CYA_1979 PF06868 CYA_1979 CYA_1980 PF00805 Pentapeptide repeats (8 copies) CYA_1981 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase CYA_1981 PF09363 XFP C-terminal domain CYA_1981 PF09364 XFP N-terminal domain CYA_1982 PF00953 Glycosyl transferase family 4 CYA_1982 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CYA_1985 PF12766 Pyridoxamine 5'-phosphate oxidase CYA_1986 PF00583 Acetyltransferase (GNAT) family CYA_1987 PF11866 CYA_1987 CYA_1988 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CYA_1989 PF13581 Histidine kinase-like ATPase domain CYA_1990 PF01266 FAD dependent oxidoreductase CYA_1990 PF04820 Tryptophan halogenase CYA_1991 PF00691 OmpA family CYA_1992 PF00717 Peptidase S24-like CYA_1992 PF01381 Helix-turn-helix CYA_1994 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CYA_1995 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CYA_1996 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CYA_1998 PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase CYA_1999 PF04193 PQ loop repeat CYA_2001 PF07282 CYA_2001 CYA_2001 PF12323 CYA_2001 CYA_2002 PF00239 Resolvase, N terminal domain CYA_2002 PF13411 MerR HTH family regulatory protein CYA_2003 PF13847 Methyltransferase domain CYA_2005 PF00565 Staphylococcal nuclease homologue CYA_2005 PF04012 CYA_2005 CYA_2006 PF00515 Tetratricopeptide repeat CYA_2006 PF13414 TPR repeat CYA_2006 PF13432 Tetratricopeptide repeat CYA_2009 PF03819 MazG nucleotide pyrophosphohydrolase domain CYA_2010 PF13518 Helix-turn-helix domain CYA_2011 PF13358 DDE superfamily endonuclease CYA_2012 PF01385 CYA_2012 CYA_2012 PF07282 CYA_2012 CYA_2013 PF00270 DEAD/DEAH box helicase CYA_2013 PF00271 Helicase conserved C-terminal domain CYA_2013 PF17191 CYA_2013 CYA_2014 PF07465 Photosystem I protein M (PsaM) CYA_2015 PF00464 Serine hydroxymethyltransferase CYA_2016 PF00953 Glycosyl transferase family 4 CYA_2018 PF00156 Phosphoribosyl transferase domain CYA_2021 PF01078 Magnesium chelatase, subunit ChlI CYA_2021 PF13335 CYA_2021 CYA_2021 PF13541 Subunit ChlI of Mg-chelatase CYA_2022 PF02463 RecF/RecN/SMC N terminal domain CYA_2027 PF00072 Response regulator receiver domain CYA_2027 PF00486 Transcriptional regulatory protein, C terminal CYA_2029 PF01497 Periplasmic binding protein CYA_2030 PF03544 Gram-negative bacterial TonB protein C-terminal CYA_2031 PF00593 TonB dependent receptor CYA_2031 PF07715 TonB-dependent Receptor Plug Domain CYA_2032 PF00005 ABC transporter CYA_2033 PF01032 FecCD transport family CYA_2034 PF01385 CYA_2034 CYA_2034 PF07282 CYA_2034 CYA_2035 PF00488 MutS domain V CYA_2035 PF01624 MutS domain I CYA_2035 PF05188 MutS domain II CYA_2035 PF05190 MutS family domain IV CYA_2035 PF05192 MutS domain III CYA_2036 PF12046 CYA_2036 CYA_2037 PF00140 Sigma-70 factor, region 1 CYA_2037 PF04539 Sigma-70 region 3 CYA_2037 PF04542 Sigma-70 region 2 CYA_2037 PF04545 Sigma-70, region 4 CYA_2038 PF03023 CYA_2038 CYA_2039 PF14105 CYA_2039 CYA_2040 PF13646 HEAT repeats CYA_2041 PF00427 Phycobilisome Linker polypeptide CYA_2041 PF01383 CpcD/allophycocyanin linker domain CYA_2042 PF00502 Phycobilisome protein CYA_2043 PF00502 Phycobilisome protein CYA_2044 PF06206 CpeT/CpcT family (DUF1001) CYA_2045 PF01409 tRNA synthetases class II core domain (F) CYA_2045 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CYA_2046 PF12058 Protein of unknown function (DUF3539) CYA_2048 PF00005 ABC transporter CYA_2049 PF12706 Beta-lactamase superfamily domain CYA_2051 PF01016 Ribosomal L27 protein CYA_2052 PF00829 Ribosomal prokaryotic L21 protein CYA_2054 PF13591 MerR HTH family regulatory protein CYA_2055 PF00226 DnaJ domain CYA_2055 PF01556 DnaJ C terminal domain CYA_2056 PF06150 ChaB CYA_2057 PF04389 Peptidase family M28 CYA_2058 PF13419 Haloacid dehalogenase-like hydrolase CYA_2059 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CYA_2059 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYA_2060 PF13847 Methyltransferase domain CYA_2061 PF01523 Putative modulator of DNA gyrase CYA_2062 PF00128 Alpha amylase, catalytic domain CYA_2062 PF02806 Alpha amylase, C-terminal all-beta domain CYA_2062 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CYA_2063 PF01385 CYA_2063 CYA_2063 PF07282 CYA_2063 CYA_2063 PF12323 CYA_2063 CYA_2064 PF01797 Transposase IS200 like CYA_2065 PF02416 mttA/Hcf106 family CYA_2066 PF04542 Sigma-70 region 2 CYA_2066 PF10099 CYA_2066 CYA_2067 PF01062 CYA_2067 CYA_2069 PF10664 CYA_2069 CYA_2070 PF11210 CYA_2070 CYA_2071 PF00534 Glycosyl transferases group 1 CYA_2071 PF08323 Starch synthase catalytic domain CYA_2072 PF03065 Glycosyl hydrolase family 57 CYA_2072 PF09210 Domain of unknown function (DUF1957) CYA_2073 PF00205 Thiamine pyrophosphate enzyme, central domain CYA_2073 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CYA_2073 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CYA_2077 PF03061 Thioesterase superfamily CYA_2079 PF13181 Tetratricopeptide repeat CYA_2079 PF13414 TPR repeat CYA_2079 PF13432 Tetratricopeptide repeat CYA_2079 PF13676 TIR domain CYA_2081 PF13358 DDE superfamily endonuclease CYA_2082 PF13565 CYA_2082 CYA_2083 PF00916 CYA_2083 CYA_2085 PF11209 CYA_2085 CYA_2086 PF10646 CYA_2086 CYA_2087 PF02405 CYA_2087 CYA_2088 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CYA_2093 PF00092 von Willebrand factor type A domain CYA_2096 PF00579 tRNA synthetases class I (W and Y) CYA_2096 PF01479 S4 domain CYA_2097 PF06514 Photosystem II 12 kDa extrinsic protein (PsbU) CYA_2098 PF02347 Glycine cleavage system P-protein CYA_2100 PF01425 Amidase CYA_2101 PF13318 CYA_2101 CYA_2102 PF01814 Hemerythrin HHE cation binding domain CYA_2103 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CYA_2104 PF01039 Carboxyl transferase domain CYA_2105 PF01740 STAS domain CYA_2106 PF02080 TrkA-C domain CYA_2106 PF02254 TrkA-N domain CYA_2107 PF08241 Methyltransferase domain CYA_2109 PF13343 Bacterial extracellular solute-binding protein CYA_2111 PF00528 Binding-protein-dependent transport system inner membrane component CYA_2112 PF00231 ATP synthase CYA_2113 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CYA_2113 PF00306 ATP synthase alpha/beta chain, C terminal domain CYA_2113 PF02874 ATP synthase alpha/beta family, beta-barrel domain CYA_2114 PF00213 ATP synthase delta (OSCP) subunit CYA_2115 PF00430 ATP synthase B/B' CF(0) CYA_2116 PF00430 ATP synthase B/B' CF(0) CYA_2117 PF00137 ATP synthase subunit C CYA_2119 PF00119 ATP synthase A chain CYA_2120 PF12966 CYA_2120 CYA_2121 PF11375 CYA_2121 CYA_2123 PF01676 Metalloenzyme superfamily CYA_2123 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CYA_2124 PF13181 Tetratricopeptide repeat CYA_2124 PF13432 Tetratricopeptide repeat CYA_2125 PF00210 Ferritin-like domain CYA_2126 PF01926 50S ribosome-binding GTPase CYA_2126 PF10396 GTP-binding protein TrmE N-terminus CYA_2126 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE CYA_2127 PF00343 Carbohydrate phosphorylase CYA_2127 PF11897 CYA_2127 CYA_2128 PF13432 Tetratricopeptide repeat CYA_2130 PF10369 Small subunit of acetolactate synthase CYA_2130 PF13710 ACT domain CYA_2132 PF11318 CYA_2132 CYA_2134 PF02685 Glucokinase CYA_2135 PF00293 NUDIX domain CYA_2136 PF00425 chorismate binding enzyme CYA_2136 PF04715 Anthranilate synthase component I, N terminal region CYA_2137 PF05721 Phytanoyl-CoA dioxygenase (PhyH) CYA_2138 PF01040 UbiA prenyltransferase family CYA_2141 PF13347 MFS/sugar transport protein CYA_2142 PF00206 Lyase CYA_2142 PF10415 Fumarase C C-terminus CYA_2144 PF00707 Translation initiation factor IF-3, C-terminal domain CYA_2144 PF05198 Translation initiation factor IF-3, N-terminal domain CYA_2145 PF00578 AhpC/TSA family CYA_2146 PF00069 Protein kinase domain CYA_2147 PF01926 50S ribosome-binding GTPase CYA_2147 PF05128 CYA_2147 CYA_2150 PF02469 Fasciclin domain CYA_2151 PF12836 Helix-hairpin-helix motif CYA_2151 PF13091 PLD-like domain CYA_2152 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CYA_2155 PF00072 Response regulator receiver domain CYA_2155 PF01584 CheW-like domain CYA_2155 PF01627 Hpt domain CYA_2155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYA_2155 PF02895 Signal transducing histidine kinase, homodimeric domain CYA_2156 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CYA_2157 PF01590 GAF domain CYA_2158 PF01385 CYA_2158 CYA_2158 PF07282 CYA_2158 CYA_2160 PF01584 CheW-like domain CYA_2161 PF00072 Response regulator receiver domain CYA_2162 PF00072 Response regulator receiver domain CYA_2163 PF00293 NUDIX domain CYA_2166 PF02171 Piwi domain CYA_2168 PF13650 Aspartyl protease CYA_2169 PF14528 LAGLIDADG-like domain CYA_2170 PF02163 Peptidase family M50 CYA_2171 PF00675 Insulinase (Peptidase family M16) CYA_2171 PF05193 Peptidase M16 inactive domain CYA_2172 PF00675 Insulinase (Peptidase family M16) CYA_2172 PF05193 Peptidase M16 inactive domain CYA_2173 PF04474 CYA_2173 CYA_2174 PF00583 Acetyltransferase (GNAT) family CYA_2176 PF11264 CYA_2176 CYA_2177 PF00696 Amino acid kinase family CYA_2177 PF01472 PUA domain CYA_2178 PF07690 Major Facilitator Superfamily CYA_2179 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CYA_2179 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CYA_2180 PF01177 Asp/Glu/Hydantoin racemase CYA_2181 PF01520 N-acetylmuramoyl-L-alanine amidase CYA_2181 PF11741 AMIN domain CYA_2183 PF00686 Starch binding domain CYA_2183 PF08795 CYA_2183 CYA_2183 PF13472 GDSL-like Lipase/Acylhydrolase family CYA_2184 PF00512 His Kinase A (phospho-acceptor) domain CYA_2184 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYA_2185 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) CYA_2186 PF00793 DAHP synthetase I family CYA_2187 PF13533 Biotin-lipoyl like CYA_2187 PF16576 CYA_2187 CYA_2189 PF13412 Winged helix-turn-helix DNA-binding CYA_2190 PF01458 Uncharacterized protein family (UPF0051) CYA_2192 PF01741 Large-conductance mechanosensitive channel, MscL CYA_2193 PF00005 ABC transporter CYA_2194 PF01458 Uncharacterized protein family (UPF0051) CYA_2195 PF14250 CYA_2195 CYA_2197 PF01957 NfeD-like C-terminal, partner-binding CYA_2199 PF01728 FtsJ-like methyltransferase CYA_2201 PF00694 Aconitase C-terminal domain CYA_2202 PF05597 CYA_2202 CYA_2206 PF00224 Pyruvate kinase, barrel domain CYA_2206 PF00391 PEP-utilising enzyme, mobile domain CYA_2206 PF02887 Pyruvate kinase, alpha/beta domain CYA_2210 PF02632 BioY family CYA_2211 PF01594 CYA_2211 CYA_2212 PF13620 Carboxypeptidase regulatory-like domain CYA_2214 PF00830 Ribosomal L28 family CYA_2215 PF00805 Pentapeptide repeats (8 copies) CYA_2215 PF13599 Pentapeptide repeats (9 copies) CYA_2216 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CYA_2216 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CYA_2217 PF05226 CYA_2217 CYA_2217 PF07730 Histidine kinase CYA_2218 PF00013 KH domain CYA_2218 PF00575 S1 RNA binding domain CYA_2218 PF01138 3' exoribonuclease family, domain 1 CYA_2218 PF03725 3' exoribonuclease family, domain 2 CYA_2218 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CYA_2219 PF00797 N-acetyltransferase CYA_2221 PF01797 Transposase IS200 like CYA_2222 PF00797 N-acetyltransferase CYA_2223 PF00682 HMGL-like CYA_2223 PF08502 LeuA allosteric (dimerisation) domain CYA_2224 PF00005 ABC transporter CYA_2225 PF01383 CpcD/allophycocyanin linker domain CYA_2226 PF00502 Phycobilisome protein CYA_2227 PF00502 Phycobilisome protein CYA_2229 PF13180 PDZ domain CYA_2229 PF13365 Trypsin-like peptidase domain CYA_2230 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CYA_2231 PF00005 ABC transporter CYA_2231 PF00571 CBS domain CYA_2232 PF00528 Binding-protein-dependent transport system inner membrane component CYA_2233 PF04542 Sigma-70 region 2 CYA_2233 PF08281 Sigma-70, region 4 CYA_2234 PF10099 CYA_2234 CYA_2235 PF04294 CYA_2235 CYA_2236 PF01209 ubiE/COQ5 methyltransferase family CYA_2239 PF00132 Bacterial transferase hexapeptide (six repeats) CYA_2240 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CYA_2241 PF08847 CYA_2241 CYA_2243 PF01161 Phosphatidylethanolamine-binding protein CYA_2245 PF10184 CYA_2245 CYA_2246 PF13483 Beta-lactamase superfamily domain CYA_2247 PF01523 Putative modulator of DNA gyrase CYA_2248 PF14261 CYA_2248 CYA_2249 PF07282 CYA_2249 CYA_2249 PF12323 CYA_2249 CYA_2250 PF00239 Resolvase, N terminal domain CYA_2250 PF13411 MerR HTH family regulatory protein CYA_2252 PF01523 Putative modulator of DNA gyrase CYA_2253 PF03167 Uracil DNA glycosylase superfamily CYA_2254 PF08241 Methyltransferase domain CYA_2256 PF04055 Radical SAM superfamily CYA_2257 PF00294 pfkB family carbohydrate kinase CYA_2258 PF01906 Putative heavy-metal-binding CYA_2259 PF01709 Transcriptional regulator CYA_2262 PF00069 Protein kinase domain CYA_2264 PF01513 ATP-NAD kinase CYA_2265 PF01882 CYA_2265 CYA_2266 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CYA_2267 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CYA_2269 PF01551 Peptidase family M23 CYA_2270 PF03099 Biotin/lipoate A/B protein ligase family CYA_2271 PF11780 CYA_2271 CYA_2272 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CYA_2273 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CYA_2275 PF00717 Peptidase S24-like CYA_2276 PF00348 Polyprenyl synthetase CYA_2277 PF02583 Metal-sensitive transcriptional repressor CYA_2278 PF05099 Tellurite resistance protein TerB CYA_2279 PF00886 Ribosomal protein S16 CYA_2280 PF13083 KH domain CYA_2281 PF02374 Anion-transporting ATPase CYA_2282 PF00977 Histidine biosynthesis protein CYA_2283 PF00459 Inositol monophosphatase family CYA_2284 PF00805 Pentapeptide repeats (8 copies) CYA_2285 PF04012 CYA_2285 CYA_2289 PF00149 Calcineurin-like phosphoesterase CYA_2290 PF01475 Ferric uptake regulator family CYA_2291 PF03190 Protein of unknown function, DUF255 CYA_2292 PF00583 Acetyltransferase (GNAT) family CYA_2293 PF03364 Polyketide cyclase / dehydrase and lipid transport CYA_2294 PF03992 Antibiotic biosynthesis monooxygenase CYA_2295 PF04367 CYA_2295 CYA_2296 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CYA_2297 PF01795 MraW methylase family CYA_2298 PF00072 Response regulator receiver domain CYA_2298 PF00196 Bacterial regulatory proteins, luxR family CYA_2300 PF02153 Prephenate dehydrogenase CYA_2302 PF02616 ScpA/B protein CYA_2304 PF07995 Glucose / Sorbosone dehydrogenase CYA_2305 PF00578 AhpC/TSA family CYA_2306 PF01055 Glycosyl hydrolases family 31 CYA_2306 PF13802 Galactose mutarotase-like CYA_2306 PF16338 CYA_2306 CYA_2306 PF17137 CYA_2306 CYA_2313 PF13482 RNase_H superfamily CYA_2315 PF00005 ABC transporter CYA_2316 PF00072 Response regulator receiver domain CYA_2316 PF00486 Transcriptional regulatory protein, C terminal CYA_2318 PF08239 Bacterial SH3 domain CYA_2321 PF01891 Cobalt uptake substrate-specific transmembrane region CYA_2322 PF02361 Cobalt transport protein CYA_2323 PF00919 Uncharacterized protein family UPF0004 CYA_2323 PF01938 TRAM domain CYA_2323 PF04055 Radical SAM superfamily CYA_2324 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CYA_2325 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CYA_2326 PF02779 Transketolase, pyrimidine binding domain CYA_2326 PF02780 Transketolase, C-terminal domain CYA_2328 PF01266 FAD dependent oxidoreductase CYA_2329 PF01807 CHC2 zinc finger CYA_2329 PF08275 DNA primase catalytic core, N-terminal domain CYA_2329 PF13155 Toprim-like CYA_2330 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CYA_2331 PF01744 CYA_2331 CYA_2332 PF07987 Domain of unkown function (DUF1775) CYA_2333 PF00069 Protein kinase domain CYA_2333 PF00515 Tetratricopeptide repeat CYA_2333 PF13181 Tetratricopeptide repeat CYA_2333 PF13371 Tetratricopeptide repeat CYA_2333 PF13414 TPR repeat CYA_2333 PF13432 Tetratricopeptide repeat CYA_2334 PF04234 CopC domain CYA_2334 PF05425 CYA_2334 CYA_2335 PF14251 CYA_2335 CYA_2336 PF00072 Response regulator receiver domain CYA_2336 PF13487 HD domain CYA_2337 PF04296 Protein of unknown function (DUF448) CYA_2338 PF00009 Elongation factor Tu GTP binding domain CYA_2338 PF04760 Translation initiation factor IF-2, N-terminal region CYA_2338 PF11987 Translation-initiation factor 2 CYA_2339 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CYA_2339 PF03129 Anticodon binding domain CYA_2339 PF04073 Aminoacyl-tRNA editing domain CYA_2343 PF07282 CYA_2343 CYA_2346 PF00456 Transketolase, thiamine diphosphate binding domain CYA_2346 PF02779 Transketolase, pyrimidine binding domain CYA_2346 PF02780 Transketolase, C-terminal domain CYA_2347 PF04055 Radical SAM superfamily CYA_2348 PF00440 Bacterial regulatory proteins, tetR family CYA_2349 PF00487 CYA_2349 CYA_2351 PF00196 Bacterial regulatory proteins, luxR family CYA_2352 PF00512 His Kinase A (phospho-acceptor) domain CYA_2352 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYA_2353 PF00106 short chain dehydrogenase CYA_2355 PF01797 Transposase IS200 like CYA_2356 PF02558 Ketopantoate reductase PanE/ApbA CYA_2356 PF08546 Ketopantoate reductase PanE/ApbA C terminal CYA_2357 PF08041 PetM family of cytochrome b6f complex subunit 7 CYA_2358 PF00124 Photosynthetic reaction centre protein CYA_2359 PF00421 Photosystem II protein CYA_2360 PF02492 CobW/HypB/UreG, nucleotide-binding domain CYA_2360 PF07683 Cobalamin synthesis protein cobW C-terminal domain CYA_2361 PF01370 NAD dependent epimerase/dehydratase family CYA_2362 PF00528 Binding-protein-dependent transport system inner membrane component CYA_2363 PF08378 CYA_2363 CYA_2363 PF13245 Part of AAA domain CYA_2365 PF00698 Acyl transferase domain CYA_2366 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CYA_2366 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CYA_2367 PF02504 Fatty acid synthesis protein CYA_2369 PF00218 Indole-3-glycerol phosphate synthase CYA_2370 PF17275 CYA_2370 CYA_2372 PF00122 E1-E2 ATPase CYA_2372 PF00403 Heavy-metal-associated domain CYA_2372 PF00702 haloacid dehalogenase-like hydrolase CYA_2373 PF01903 CbiX CYA_2374 PF04755 CYA_2374 CYA_2376 PF01300 Telomere recombination CYA_2378 PF01018 GTP1/OBG CYA_2378 PF01926 50S ribosome-binding GTPase CYA_2379 PF00575 S1 RNA binding domain CYA_2382 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family CYA_2383 PF00106 short chain dehydrogenase CYA_2385 PF00148 Nitrogenase component 1 type Oxidoreductase CYA_2386 PF00202 Aminotransferase class-III CYA_2387 PF04551 GcpE protein CYA_2388 PF02577 Bifunctional nuclease CYA_2389 PF00436 Single-strand binding protein family CYA_2390 PF02571 CYA_2390 CYA_2391 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains CYA_2391 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CYA_2391 PF01010 CYA_2391 CYA_2392 PF00239 Resolvase, N terminal domain CYA_2392 PF13411 MerR HTH family regulatory protein CYA_2393 PF07282 CYA_2393 CYA_2393 PF12323 CYA_2393 CYA_2394 PF00072 Response regulator receiver domain CYA_2394 PF00486 Transcriptional regulatory protein, C terminal CYA_2395 PF01070 FMN-dependent dehydrogenase CYA_2399 PF04536 TLP18 CYA_2401 PF00082 Subtilase family CYA_2403 PF00805 Pentapeptide repeats (8 copies) CYA_2405 PF00211 Adenylate and Guanylate cyclase catalytic domain CYA_2405 PF00498 FHA domain CYA_2406 PF06799 CYA_2406 CYA_2407 PF01687 Riboflavin kinase CYA_2407 PF06574 FAD synthetase CYA_2408 PF02654 CYA_2408 CYA_2409 PF14242 CYA_2409 CYA_2410 PF00140 Sigma-70 factor, region 1 CYA_2410 PF04539 Sigma-70 region 3 CYA_2410 PF04542 Sigma-70 region 2 CYA_2410 PF04545 Sigma-70, region 4 CYA_2411 PF00809 Pterin binding enzyme CYA_2411 PF02310 B12 binding domain CYA_2411 PF02574 Homocysteine S-methyltransferase CYA_2411 PF02607 B12 binding domain CYA_2411 PF02965 Vitamin B12 dependent methionine synthase, activation domain CYA_2412 PF00528 Binding-protein-dependent transport system inner membrane component CYA_2413 PF12697 Alpha/beta hydrolase family CYA_2415 PF01797 Transposase IS200 like CYA_2417 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYA_2417 PF03466 LysR substrate binding domain CYA_2419 PF13242 HAD-hyrolase-like CYA_2420 PF02618 YceG-like family CYA_2421 PF00696 Amino acid kinase family CYA_2423 PF01169 CYA_2423 CYA_2424 PF07282 CYA_2424 CYA_2424 PF12323 CYA_2424 CYA_2425 PF00239 Resolvase, N terminal domain CYA_2425 PF13411 MerR HTH family regulatory protein CYA_2427 PF01788 PsbJ CYA_2428 PF02419 PsbL protein CYA_2429 PF00283 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits CYA_2430 PF00283 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits CYA_2430 PF00284 Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit CYA_2431 PF00395 S-layer homology domain CYA_2432 PF01966 HD domain CYA_2432 PF02541 Ppx/GppA phosphatase family CYA_2433 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CYA_2433 PF03129 Anticodon binding domain CYA_2433 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CYA_2435 PF03069 Acetamidase/Formamidase family CYA_2436 PF02446 4-alpha-glucanotransferase CYA_2437 PF00005 ABC transporter CYA_2438 PF00156 Phosphoribosyl transferase domain CYA_2439 PF00239 Resolvase, N terminal domain CYA_2439 PF13411 MerR HTH family regulatory protein CYA_2440 PF07282 CYA_2440 CYA_2440 PF12323 CYA_2440 CYA_2441 PF01047 MarR family CYA_2444 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CYA_2445 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CYA_2445 PF16321 CYA_2445 CYA_2446 PF06838 Methionine gamma-lyase CYA_2449 PF03647 Transmembrane proteins 14C CYA_2450 PF14326 CYA_2450 CYA_2453 PF14559 Tetratricopeptide repeat CYA_2454 PF00291 Pyridoxal-phosphate dependent enzyme CYA_2455 PF00425 chorismate binding enzyme CYA_2456 PF01040 UbiA prenyltransferase family CYA_2457 PF03968 OstA-like protein CYA_2458 PF03739 CYA_2458 CYA_2460 PF00155 Aminotransferase class I and II CYA_2461 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CYA_2464 PF00210 Ferritin-like domain CYA_2465 PF01926 50S ribosome-binding GTPase CYA_2465 PF05128 CYA_2465 CYA_2466 PF00535 Glycosyl transferase family 2 CYA_2467 PF01430 Hsp33 protein CYA_2469 PF14464 Prokaryotic homologs of the JAB domain CYA_2470 PF02597 ThiS family CYA_2471 PF00581 Rhodanese-like domain CYA_2471 PF00899 ThiF family CYA_2473 PF00925 GTP cyclohydrolase II CYA_2473 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CYA_2474 PF00392 Bacterial regulatory proteins, gntR family CYA_2476 PF07681 CYA_2476 CYA_2477 PF02503 Polyphosphate kinase middle domain CYA_2477 PF13089 Polyphosphate kinase N-terminal domain CYA_2477 PF13090 Polyphosphate kinase C-terminal domain CYA_2478 PF02653 CYA_2478 CYA_2479 PF02653 CYA_2479 CYA_2480 PF06835 Lipopolysaccharide-assembly, LptC-related CYA_2481 PF00884 Sulfatase CYA_2482 PF12049 CYA_2482 CYA_2483 PF13561 Enoyl-(Acyl carrier protein) reductase CYA_2484 PF01019 Gamma-glutamyltranspeptidase CYA_2485 PF13419 Haloacid dehalogenase-like hydrolase CYA_2486 PF05728 Uncharacterised protein family (UPF0227) CYA_2487 PF03840 Preprotein translocase SecG subunit CYA_2489 PF02548 Ketopantoate hydroxymethyltransferase CYA_2492 PF05996 Ferredoxin-dependent bilin reductase CYA_2493 PF06325 Ribosomal protein L11 methyltransferase (PrmA) CYA_2494 PF04452 RNA methyltransferase CYA_2495 PF03129 Anticodon binding domain CYA_2495 PF13393 Histidyl-tRNA synthetase CYA_2497 PF00582 Universal stress protein family CYA_2501 PF01050 Mannose-6-phosphate isomerase CYA_2502 PF03170 Bacterial cellulose synthase subunit CYA_2503 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CYA_2503 PF13641 Glycosyltransferase like family 2 CYA_2506 PF09423 PhoD-like phosphatase CYA_2506 PF16655 CYA_2506 CYA_2507 PF02617 ATP-dependent Clp protease adaptor protein ClpS CYA_2509 PF02517 CAAX protease self-immunity CYA_2510 PF00474 Sodium:solute symporter family CYA_2512 PF02481 DNA recombination-mediator protein A CYA_2512 PF12826 Helix-hairpin-helix motif CYA_2513 PF00977 Histidine biosynthesis protein CYA_2514 PF01546 Peptidase family M20/M25/M40 CYA_2514 PF07687 Peptidase dimerisation domain CYA_2516 PF01935 Domain of unknown function DUF87 CYA_2518 PF09376 NurA domain CYA_2519 PF02463 RecF/RecN/SMC N terminal domain CYA_2519 PF13175 AAA ATPase domain CYA_2520 PF00149 Calcineurin-like phosphoesterase CYA_2521 PF00223 Photosystem I psaA/psaB protein CYA_2522 PF00223 Photosystem I psaA/psaB protein CYA_2527 PF00883 Cytosol aminopeptidase family, catalytic domain CYA_2527 PF02789 Cytosol aminopeptidase family, N-terminal domain CYA_2529 PF00950 CYA_2529 CYA_2531 PF00005 ABC transporter CYA_2532 PF01297 Periplasmic solute binding protein family CYA_2533 PF02657 Fe-S metabolism associated domain CYA_2534 PF02353 Mycolic acid cyclopropane synthetase CYA_2536 PF01951 Archease protein family (MTH1598/TM1083) CYA_2537 PF01139 tRNA-splicing ligase RtcB CYA_2538 PF13640 2OG-Fe(II) oxygenase superfamily CYA_2539 PF09827 CRISPR associated protein Cas2 CYA_2542 PF03787 RAMP superfamily CYA_2543 PF05685 Putative restriction endonuclease CYA_2545 PF03787 RAMP superfamily CYA_2546 PF09700 CRISPR-associated protein (Cas_Cmr3) CYA_2547 PF12469 CRISPR-associated protein CYA_2548 PF09455 CRISPR-associated (Cas) DxTHG family CYA_2550 PF05685 Putative restriction endonuclease CYA_2551 PF05685 Putative restriction endonuclease CYA_2553 PF00512 His Kinase A (phospho-acceptor) domain CYA_2553 PF01590 GAF domain CYA_2553 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYA_2553 PF08447 PAS fold CYA_2553 PF08448 PAS fold CYA_2554 PF00113 Enolase, C-terminal TIM barrel domain CYA_2554 PF03952 Enolase, N-terminal domain CYA_2555 PF00326 Prolyl oligopeptidase family CYA_2555 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CYA_2556 PF00582 Universal stress protein family CYA_2557 PF02943 Ferredoxin thioredoxin reductase catalytic beta chain CYA_2558 PF06596 Photosystem II reaction centre X protein (PsbX) CYA_2559 PF00535 Glycosyl transferase family 2 CYA_2559 PF13489 Methyltransferase domain CYA_2560 PF03040 CYA_2560 CYA_2562 PF05258 CYA_2562 CYA_2563 PF00924 Mechanosensitive ion channel CYA_2564 PF00271 Helicase conserved C-terminal domain CYA_2564 PF02151 UvrB/uvrC motif CYA_2564 PF04851 Type III restriction enzyme, res subunit CYA_2564 PF12344 Ultra-violet resistance protein B CYA_2566 PF02492 CobW/HypB/UreG, nucleotide-binding domain CYA_2566 PF07683 Cobalamin synthesis protein cobW C-terminal domain CYA_2568 PF06206 CpeT/CpcT family (DUF1001) CYA_2569 PF00512 His Kinase A (phospho-acceptor) domain CYA_2569 PF01590 GAF domain CYA_2569 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYA_2569 PF08448 PAS fold CYA_2570 PF04055 Radical SAM superfamily CYA_2570 PF13394 4Fe-4S single cluster domain CYA_2571 PF00528 Binding-protein-dependent transport system inner membrane component CYA_2572 PF00239 Resolvase, N terminal domain CYA_2572 PF13411 MerR HTH family regulatory protein CYA_2573 PF07282 CYA_2573 CYA_2573 PF12323 CYA_2573 CYA_2574 PF13649 Methyltransferase domain CYA_2575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYA_2577 PF11460 CYA_2577 CYA_2578 PF10716 CYA_2578 CYA_2579 PF09383 NIL domain CYA_2579 PF14697 4Fe-4S dicluster domain CYA_2580 PF01797 Transposase IS200 like CYA_2581 PF01385 CYA_2581 CYA_2581 PF07282 CYA_2581 CYA_2581 PF12323 CYA_2581 CYA_2582 PF00488 MutS domain V CYA_2582 PF01713 Smr domain CYA_2585 PF00699 Urease beta subunit CYA_2587 PF01797 Transposase IS200 like CYA_2590 PF01628 HrcA protein C terminal domain CYA_2590 PF08220 DeoR-like helix-turn-helix domain CYA_2591 PF01171 PP-loop family CYA_2592 PF08486 CYA_2592 CYA_2593 PF07690 Major Facilitator Superfamily CYA_2594 PF01809 CYA_2594 CYA_2595 PF01042 Endoribonuclease L-PSP CYA_2597 PF01187 Macrophage migration inhibitory factor (MIF) CYA_2600 PF06596 Photosystem II reaction centre X protein (PsbX) CYA_2601 PF02943 Ferredoxin thioredoxin reductase catalytic beta chain CYA_2603 PF12697 Alpha/beta hydrolase family CYA_2604 PF00421 Photosystem II protein CYA_2604 PF02605 Photosystem I reaction centre subunit XI CYA_2605 PF00258 Flavodoxin CYA_2606 PF00421 Photosystem II protein CYA_2608 PF09375 Imelysin CYA_2611 PF13640 2OG-Fe(II) oxygenase superfamily CYA_2612 PF06537 CYA_2612 CYA_2613 PF09335 CYA_2613 CYA_2614 PF13847 Methyltransferase domain CYA_2615 PF11866 CYA_2615 CYA_2616 PF01119 DNA mismatch repair protein, C-terminal domain CYA_2616 PF08676 MutL C terminal dimerisation domain CYA_2616 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYA_2617 PF07884 Vitamin K epoxide reductase family CYA_2618 PF00072 Response regulator receiver domain CYA_2618 PF00990 GGDEF domain CYA_2619 PF03437 BtpA family CYA_2620 PF01180 Dihydroorotate dehydrogenase CYA_2621 PF13458 Periplasmic binding protein CYA_2622 PF00005 ABC transporter CYA_2622 PF12399 Branched-chain amino acid ATP-binding cassette transporter CYA_2623 PF00005 ABC transporter CYA_2624 PF02463 RecF/RecN/SMC N terminal domain CYA_2626 PF00475 Imidazoleglycerol-phosphate dehydratase CYA_2627 PF00849 RNA pseudouridylate synthase CYA_2628 PF00270 DEAD/DEAH box helicase CYA_2628 PF00271 Helicase conserved C-terminal domain CYA_2629 PF00933 Glycosyl hydrolase family 3 N terminal domain CYA_2630 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CYA_2633 PF12844 Helix-turn-helix domain CYA_2635 PF00140 Sigma-70 factor, region 1 CYA_2635 PF04539 Sigma-70 region 3 CYA_2635 PF04542 Sigma-70 region 2 CYA_2635 PF04545 Sigma-70, region 4 CYA_2636 PF01385 CYA_2636 CYA_2636 PF07282 CYA_2636 CYA_2636 PF12323 CYA_2636 CYA_2637 PF13358 DDE superfamily endonuclease CYA_2639 PF01710 Transposase CYA_2640 PF01797 Transposase IS200 like CYA_2642 PF03092 CYA_2642 CYA_2643 PF01138 3' exoribonuclease family, domain 1 CYA_2643 PF03725 3' exoribonuclease family, domain 2 CYA_2644 PF00072 Response regulator receiver domain CYA_2645 PF00677 Lumazine binding domain CYA_2646 PF01202 Shikimate kinase CYA_2647 PF00124 Photosynthetic reaction centre protein CYA_2648 PF00534 Glycosyl transferases group 1 CYA_2648 PF08323 Starch synthase catalytic domain CYA_2649 PF03602 Conserved hypothetical protein 95 CYA_2651 PF13432 Tetratricopeptide repeat CYA_2652 PF13646 HEAT repeats CYA_2653 PF00270 DEAD/DEAH box helicase CYA_2653 PF00271 Helicase conserved C-terminal domain CYA_2653 PF08148 DSHCT (NUC185) domain CYA_2654 PF00117 Glutamine amidotransferase class-I CYA_2655 PF13483 Beta-lactamase superfamily domain CYA_2656 PF12796 Ankyrin repeats (3 copies) CYA_2657 PF01916 Deoxyhypusine synthase CYA_2658 PF04055 Radical SAM superfamily CYA_2658 PF06968 Biotin and Thiamin Synthesis associated domain CYA_2659 PF00512 His Kinase A (phospho-acceptor) domain CYA_2659 PF00672 HAMP domain CYA_2659 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYA_2659 PF08448 PAS fold CYA_2660 PF13548 CYA_2660 CYA_2661 PF13239 CYA_2661 CYA_2662 PF00571 CBS domain CYA_2662 PF01595 CYA_2662 CYA_2663 PF02224 Cytidylate kinase CYA_2663 PF02569 Pantoate-beta-alanine ligase CYA_2664 PF02529 Cytochrome B6-F complex subunit 5 CYA_2665 PF00226 DnaJ domain CYA_2665 PF03704 Bacterial transcriptional activator domain CYA_2666 PF00501 AMP-binding enzyme CYA_2666 PF13193 AMP-binding enzyme C-terminal domain CYA_2667 PF00023 Ankyrin repeat CYA_2667 PF12796 Ankyrin repeats (3 copies) CYA_2667 PF13637 Ankyrin repeats (many copies) CYA_2670 PF00056 lactate/malate dehydrogenase, NAD binding domain CYA_2670 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CYA_2671 PF02390 Putative methyltransferase CYA_2672 PF02517 CAAX protease self-immunity CYA_2673 PF00226 DnaJ domain CYA_2674 PF00497 Bacterial extracellular solute-binding proteins, family 3 CYA_2675 PF00459 Inositol monophosphatase family CYA_2676 PF00498 FHA domain CYA_2678 PF07685 CobB/CobQ-like glutamine amidotransferase domain CYA_2678 PF13500 AAA domain CYA_2679 PF01370 NAD dependent epimerase/dehydratase family CYA_2680 PF03091 CutA1 divalent ion tolerance protein CYA_2681 PF01467 Cytidylyltransferase CYA_2682 PF05757 Oxygen evolving enhancer protein 3 (PsbQ) CYA_2683 PF02374 Anion-transporting ATPase CYA_2684 PF00239 Resolvase, N terminal domain CYA_2684 PF13411 MerR HTH family regulatory protein CYA_2685 PF07282 CYA_2685 CYA_2685 PF12323 CYA_2685 CYA_2686 PF01134 Glucose inhibited division protein A CYA_2688 PF00871 Acetokinase family CYA_2690 PF00498 FHA domain CYA_2692 PF00498 FHA domain CYA_2694 PF00239 Resolvase, N terminal domain CYA_2694 PF13411 MerR HTH family regulatory protein CYA_2695 PF07282 CYA_2695 CYA_2695 PF12323 CYA_2695 CYA_2696 PF04025 CYA_2696 CYA_2697 PF00625 Guanylate kinase CYA_2699 PF00072 Response regulator receiver domain CYA_2699 PF00486 Transcriptional regulatory protein, C terminal CYA_2700 PF01790 CYA_2700 CYA_2703 PF02915 Rubrerythrin CYA_2704 PF00310 Glutamine amidotransferases class-II CYA_2704 PF01493 GXGXG motif CYA_2704 PF01645 Conserved region in glutamate synthase CYA_2704 PF04898 Glutamate synthase central domain CYA_2708 PF00005 ABC transporter CYA_2708 PF13732 CYA_2708 CYA_2709 PF01710 Transposase CYA_2710 PF13358 DDE superfamily endonuclease CYA_2711 PF01061 CYA_2711 CYA_2713 PF08241 Methyltransferase domain CYA_2714 PF01590 GAF domain CYA_2714 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYA_2714 PF13185 GAF domain CYA_2715 PF00749 tRNA synthetases class I (E and Q), catalytic domain CYA_2717 PF10742 CYA_2717 CYA_2719 PF14357 CYA_2719 CYA_2722 PF13518 Helix-turn-helix domain CYA_2723 PF13358 DDE superfamily endonuclease CYA_2724 PF01797 Transposase IS200 like CYA_2726 PF04402 Protein of unknown function (DUF541) CYA_2727 PF00072 Response regulator receiver domain CYA_2727 PF00990 GGDEF domain CYA_2729 PF08501 Shikimate dehydrogenase substrate binding domain CYA_2732 PF00750 tRNA synthetases class I (R) CYA_2732 PF03485 Arginyl tRNA synthetase N terminal domain CYA_2732 PF05746 DALR anticodon binding domain CYA_2734 PF01012 Electron transfer flavoprotein domain CYA_2735 PF00766 Electron transfer flavoprotein FAD-binding domain CYA_2735 PF01012 Electron transfer flavoprotein domain CYA_2736 PF02325 CYA_2736 CYA_2737 PF00072 Response regulator receiver domain CYA_2737 PF14332 CYA_2737 CYA_2738 PF00072 Response regulator receiver domain CYA_2739 PF00072 Response regulator receiver domain CYA_2740 PF01584 CheW-like domain CYA_2741 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CYA_2741 PF00672 HAMP domain CYA_2741 PF14559 Tetratricopeptide repeat CYA_2742 PF00072 Response regulator receiver domain CYA_2742 PF01584 CheW-like domain CYA_2742 PF01627 Hpt domain CYA_2742 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYA_2742 PF02895 Signal transducing histidine kinase, homodimeric domain CYA_2743 PF03713 Domain of unknown function (DUF305) CYA_2744 PF00795 Carbon-nitrogen hydrolase CYA_2746 PF13847 Methyltransferase domain CYA_2748 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel CYA_2749 PF00502 Phycobilisome protein CYA_2750 PF02941 Ferredoxin thioredoxin reductase variable alpha chain CYA_2751 PF00004 ATPase family associated with various cellular activities (AAA) CYA_2751 PF01434 Peptidase family M41 CYA_2751 PF06480 FtsH Extracellular CYA_2752 PF00343 Carbohydrate phosphorylase CYA_2752 PF11897 CYA_2752 CYA_2753 PF08486 CYA_2753 CYA_2754 PF14437 CYA_2754 CYA_2755 PF13180 PDZ domain CYA_2755 PF13365 Trypsin-like peptidase domain CYA_2756 PF00069 Protein kinase domain CYA_2756 PF05419 GUN4-like CYA_2758 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYA_2759 PF00122 E1-E2 ATPase CYA_2759 PF00689 Cation transporting ATPase, C-terminus CYA_2759 PF00690 Cation transporter/ATPase, N-terminus CYA_2759 PF00702 haloacid dehalogenase-like hydrolase CYA_2759 PF13246 Putative hydrolase of sodium-potassium ATPase alpha subunit CYA_2760 PF01370 NAD dependent epimerase/dehydratase family CYA_2760 PF08338 Domain of unknown function (DUF1731) CYA_2762 PF00490 Delta-aminolevulinic acid dehydratase CYA_2765 PF02532 Photosystem II reaction centre I protein (PSII 4 CYA_2767 PF02632 BioY family CYA_2769 PF00459 Inositol monophosphatase family CYA_2771 PF13239 CYA_2771 CYA_2773 PF00512 His Kinase A (phospho-acceptor) domain CYA_2773 PF01590 GAF domain CYA_2773 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYA_2773 PF10069 CYA_2773 CYA_2773 PF17150 CYA_2773 CYA_2774 PF03364 Polyketide cyclase / dehydrase and lipid transport CYA_2776 PF03742 PetN CYA_2778 PF03745 Domain of unknown function (DUF309) CYA_2779 PF00360 Phytochrome region CYA_2779 PF00512 His Kinase A (phospho-acceptor) domain CYA_2779 PF01590 GAF domain CYA_2779 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYA_2780 PF01026 TatD related DNase CYA_2781 PF00578 AhpC/TSA family CYA_2782 PF13531 Bacterial extracellular solute-binding protein CYA_2783 PF00528 Binding-protein-dependent transport system inner membrane component CYA_2785 PF13416 Bacterial extracellular solute-binding protein CYA_2786 PF00528 Binding-protein-dependent transport system inner membrane component CYA_2787 PF11947 CYA_2787 CYA_2788 PF00312 Ribosomal protein S15 CYA_2789 PF02985 HEAT repeat CYA_2789 PF13646 HEAT repeats CYA_2790 PF00502 Phycobilisome protein CYA_2791 PF00437 Type II/IV secretion system protein CYA_2792 PF01227 GTP cyclohydrolase I CYA_2793 PF00106 short chain dehydrogenase CYA_2794 PF00005 ABC transporter CYA_2795 PF04278 Tic22-like family CYA_2796 PF05175 Methyltransferase small domain CYA_2797 PF00512 His Kinase A (phospho-acceptor) domain CYA_2798 PF13326 Photosystem II Pbs27 CYA_2799 PF07298 CYA_2799 CYA_2800 PF02538 CYA_2800 CYA_2801 PF00085 Thioredoxin CYA_2803 PF13180 PDZ domain CYA_2804 PF00561 alpha/beta hydrolase fold CYA_2805 PF03065 Glycosyl hydrolase family 57 CYA_2806 PF14279 CYA_2806 CYA_2807 PF09367 CpeS-like protein CYA_2808 PF01565 FAD binding domain CYA_2808 PF02913 FAD linked oxidases, C-terminal domain CYA_2809 PF00004 ATPase family associated with various cellular activities (AAA) CYA_2810 PF13847 Methyltransferase domain CYA_2811 PF01632 Ribosomal protein L35 CYA_2812 PF00453 Ribosomal protein L20 CYA_2813 PF01808 AICARFT/IMPCHase bienzyme CYA_2813 PF02142 MGS-like domain CYA_2814 PF00497 Bacterial extracellular solute-binding proteins, family 3 CYA_2815 PF01618 CYA_2815 CYA_2816 PF02472 Biopolymer transport protein ExbD/TolR CYA_2817 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CYA_2817 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CYA_2818 PF03572 Peptidase family S41 CYA_2818 PF13180 PDZ domain CYA_2820 PF00171 Aldehyde dehydrogenase family CYA_2821 PF00076 RNA recognition motif CYA_2822 PF01323 DSBA-like thioredoxin domain CYA_2823 PF01844 HNH endonuclease CYA_2826 PF01368 DHH family CYA_2826 PF02272 DHHA1 domain CYA_2827 PF00149 Calcineurin-like phosphoesterase CYA_2828 PF01725 Ham1 family CYA_2830 PF02223 Thymidylate kinase CYA_2831 PF05235 CHAD domain CYA_2832 PF13416 Bacterial extracellular solute-binding protein CYA_2834 PF00504 Chlorophyll A-B binding protein CYA_2836 PF00072 Response regulator receiver domain CYA_2836 PF00512 His Kinase A (phospho-acceptor) domain CYA_2836 PF01590 GAF domain CYA_2836 PF01627 Hpt domain CYA_2836 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYA_2836 PF05227 CHASE3 domain CYA_2836 PF08448 PAS fold CYA_2841 PF01702 Queuine tRNA-ribosyltransferase CYA_2845 PF01710 Transposase CYA_2846 PF13358 DDE superfamily endonuclease CYA_2848 PF04079 Putative transcriptional regulators (Ypuh-like) CYA_2849 PF00578 AhpC/TSA family CYA_2849 PF10417 C-terminal domain of 1-Cys peroxiredoxin CYA_2851 PF00924 Mechanosensitive ion channel CYA_2852 PF12146 Putative lysophospholipase CYA_2853 PF02517 CAAX protease self-immunity CYA_2854 PF04230 CYA_2854 CYA_2856 PF00905 Penicillin binding protein transpeptidase domain CYA_2856 PF00912 Transglycosylase CYA_2858 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CYA_2858 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CYA_2859 PF00069 Protein kinase domain CYA_2861 PF00582 Universal stress protein family CYA_2861 PF00999 Sodium/hydrogen exchanger family CYA_2862 PF02092 CYA_2862 CYA_2863 PF03881 Fructosamine kinase CYA_2865 PF03029 Conserved hypothetical ATP binding protein CYA_2866 PF11563 Protoglobin CYA_2867 PF03259 Roadblock/LC7 domain CYA_2868 PF14332 CYA_2868 CYA_2869 PF14332 CYA_2869 CYA_2870 PF14332 CYA_2870 CYA_2871 PF00122 E1-E2 ATPase CYA_2871 PF00403 Heavy-metal-associated domain CYA_2871 PF00702 haloacid dehalogenase-like hydrolase CYA_2873 PF00109 Beta-ketoacyl synthase, N-terminal domain CYA_2873 PF02801 Beta-ketoacyl synthase, C-terminal domain CYA_2874 PF00550 Phosphopantetheine attachment site CYA_2875 PF01250 Ribosomal protein S6 CYA_2876 PF00436 Single-strand binding protein family CYA_2877 PF00246 Zinc carboxypeptidase CYA_2878 PF00582 Universal stress protein family CYA_2879 PF14238 CYA_2879 CYA_2880 PF09822 CYA_2880 CYA_2881 PF12679 CYA_2881 CYA_2882 PF00005 ABC transporter CYA_2883 PF00586 AIR synthase related protein, N-terminal domain CYA_2883 PF02769 AIR synthase related protein, C-terminal domain CYA_2884 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel CYA_2885 PF00072 Response regulator receiver domain CYA_2886 PF00989 PAS fold CYA_2886 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYA_2886 PF07568 CYA_2886 CYA_2886 PF08447 PAS fold CYA_2886 PF13426 PAS domain CYA_2887 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CYA_2887 PF14572 Phosphoribosyl synthetase-associated domain CYA_2888 PF00005 ABC transporter CYA_2889 PF05154 CYA_2889 CYA_2890 PF01098 CYA_2890 CYA_2891 PF00266 Aminotransferase class-V CYA_2892 PF11833 CYA_2892 CYA_2893 PF01255 Putative undecaprenyl diphosphate synthase CYA_2894 PF02457 DisA bacterial checkpoint controller nucleotide-binding CYA_2895 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CYA_2895 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CYA_2897 PF00919 Uncharacterized protein family UPF0004 CYA_2897 PF01938 TRAM domain CYA_2897 PF04055 Radical SAM superfamily CYA_2899 PF00709 Adenylosuccinate synthetase CYA_2900 PF03572 Peptidase family S41 CYA_2901 PF05685 Putative restriction endonuclease CYA_2902 PF08239 Bacterial SH3 domain CYA_2903 PF02463 RecF/RecN/SMC N terminal domain CYA_2903 PF06470 SMC proteins Flexible Hinge Domain CYA_2904 PF00825 Ribonuclease P CYA_2905 PF00468 Ribosomal protein L34