SYNPCC7002_A0001	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A0001	SM00760	Bacterial dnaA protein helix-turn-helix domain
SYNPCC7002_A0010	SM01133	SYNPCC7002_A0010
SYNPCC7002_A0019	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A0022	SM00320	WD40 repeats
SYNPCC7002_A0024	SM00864	Tubulin/FtsZ family, GTPase domain
SYNPCC7002_A0024	SM00865	Tubulin/FtsZ family, C-terminal domain
SYNPCC7002_A0033	SM01091	Transporter associated domain
SYNPCC7002_A0040	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A0045	SM00448	cheY-homologous receiver domain
SYNPCC7002_A0046	SM00448	cheY-homologous receiver domain
SYNPCC7002_A0047	SM00260	Two component signalling adaptor domain
SYNPCC7002_A0048	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SYNPCC7002_A0048	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SYNPCC7002_A0049	SM00073	Histidine Phosphotransfer domain
SYNPCC7002_A0049	SM00260	Two component signalling adaptor domain
SYNPCC7002_A0049	SM00387	Histidine kinase-like ATPases
SYNPCC7002_A0049	SM00448	cheY-homologous receiver domain
SYNPCC7002_A0051	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SYNPCC7002_A0053	SM00841	Elongation factor P, C-terminal
SYNPCC7002_A0053	SM01185	SYNPCC7002_A0053
SYNPCC7002_A0061	SM00358	Double-stranded RNA binding motif
SYNPCC7002_A0061	SM00535	Ribonuclease III family
SYNPCC7002_A0073	SM01192	SYNPCC7002_A0073
SYNPCC7002_A0073	SM01193	SYNPCC7002_A0073
SYNPCC7002_A0085	SM00822	SYNPCC7002_A0085
SYNPCC7002_A0106	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
SYNPCC7002_A0120	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A0131	SM00422	helix_turn_helix, mercury resistance
SYNPCC7002_A0139	SM00448	cheY-homologous receiver domain
SYNPCC7002_A0139	SM00862	Transcriptional regulatory protein, C terminal
SYNPCC7002_A0141	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A0141	SM01086	C-terminal, D2-small domain, of ClpB protein
SYNPCC7002_A0148	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SYNPCC7002_A0148	SM00091	PAS domain
SYNPCC7002_A0148	SM00387	Histidine kinase-like ATPases
SYNPCC7002_A0148	SM00388	His Kinase A (phosphoacceptor) domain
SYNPCC7002_A0148	SM00448	cheY-homologous receiver domain
SYNPCC7002_A0154	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A0166	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A0168	SM00959	Rho termination factor, N-terminal domain
SYNPCC7002_A0175	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
SYNPCC7002_A0178	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
SYNPCC7002_A0178	SM00534	ATPase domain of DNA mismatch repair MUTS family
SYNPCC7002_A0183	SM00028	Tetratricopeptide repeats
SYNPCC7002_A0188	SM00937	SYNPCC7002_A0188
SYNPCC7002_A0191	SM00670	Large family of predicted nucleotide-binding domains
SYNPCC7002_A0196	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
SYNPCC7002_A0197	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
SYNPCC7002_A0199	SM00116	Domain in cystathionine beta-synthase and other proteins.
SYNPCC7002_A0199	SM01093	SYNPCC7002_A0199
SYNPCC7002_A0213	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SYNPCC7002_A0213	SM00245	tail specific protease
SYNPCC7002_A0218	SM00448	cheY-homologous receiver domain
SYNPCC7002_A0218	SM00862	Transcriptional regulatory protein, C terminal
SYNPCC7002_A0221	SM01350	SYNPCC7002_A0221
SYNPCC7002_A0237	SM00465	GIY-YIG type nucleases (URI domain)
SYNPCC7002_A0240	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A0245	SM00831	Cation transporter/ATPase, N-terminus
SYNPCC7002_A0246	SM01230	SYNPCC7002_A0246
SYNPCC7002_A0249	SM00465	GIY-YIG type nucleases (URI domain)
SYNPCC7002_A0266	SM01240	SYNPCC7002_A0266
SYNPCC7002_A0272	SM00360	RNA recognition motif
SYNPCC7002_A0273	SM00116	Domain in cystathionine beta-synthase and other proteins.
SYNPCC7002_A0273	SM00924	MgtE intracellular N domain
SYNPCC7002_A0274	SM00320	WD40 repeats
SYNPCC7002_A0288	SM01248	SYNPCC7002_A0288
SYNPCC7002_A0289	SM01247	SYNPCC7002_A0289
SYNPCC7002_A0295	SM00387	Histidine kinase-like ATPases
SYNPCC7002_A0295	SM00388	His Kinase A (phosphoacceptor) domain
SYNPCC7002_A0295	SM00448	cheY-homologous receiver domain
SYNPCC7002_A0307	SM00905	Dihydroneopterin aldolase
SYNPCC7002_A0309	SM00729	Elongator protein 3, MiaB family, Radical SAM
SYNPCC7002_A0309	SM00876	Biotin and Thiamin Synthesis associated domain
SYNPCC7002_A0327	SM00729	Elongator protein 3, MiaB family, Radical SAM
SYNPCC7002_A0338	SM00062	Bacterial periplasmic substrate-binding proteins
SYNPCC7002_A0338	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
SYNPCC7002_A0341	SM00838	Elongation factor G C-terminus
SYNPCC7002_A0341	SM00889	Elongation factor G, domain IV
SYNPCC7002_A0347	SM00116	Domain in cystathionine beta-synthase and other proteins.
SYNPCC7002_A0348	SM00567	E-Z type HEAT repeats
SYNPCC7002_A0349	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A0352	SM01011	Aminopeptidase P, N-terminal domain
SYNPCC7002_A0354	SM00271	DnaJ molecular chaperone homology domain
SYNPCC7002_A0360	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A0363	SM00450	Rhodanese Homology Domain
SYNPCC7002_A0365	SM00487	DEAD-like helicases superfamily
SYNPCC7002_A0365	SM00490	helicase superfamily c-terminal domain
SYNPCC7002_A0371	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SYNPCC7002_A0371	SM00331	Sigma factor PP2C-like phosphatases
SYNPCC7002_A0379	SM00100	Cyclic nucleotide-monophosphate binding domain
SYNPCC7002_A0384	SM00535	Ribonuclease III family
SYNPCC7002_A0385	SM00967	RNA 2'-O ribose methyltransferase substrate binding
SYNPCC7002_A0395	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A0406	SM00966	SpoVT / AbrB like domain 
SYNPCC7002_A0418	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A0425	SM00028	Tetratricopeptide repeats
SYNPCC7002_A0426	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A0428	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SYNPCC7002_A0428	SM00387	Histidine kinase-like ATPases
SYNPCC7002_A0428	SM00388	His Kinase A (phosphoacceptor) domain
SYNPCC7002_A0431	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A0431	SM01086	C-terminal, D2-small domain, of ClpB protein
SYNPCC7002_A0435	SM00567	E-Z type HEAT repeats
SYNPCC7002_A0438	SM00116	Domain in cystathionine beta-synthase and other proteins.
SYNPCC7002_A0442	SM00388	His Kinase A (phosphoacceptor) domain
SYNPCC7002_A0446	SM00220	Serine/Threonine protein kinases, catalytic domain
SYNPCC7002_A0447	SM00873	B3/4 domain
SYNPCC7002_A0447	SM00874	tRNA synthetase B5 domain
SYNPCC7002_A0447	SM00896	Ferredoxin-fold anticodon binding domain
SYNPCC7002_A0448	SM00919	Malic enzyme, NAD binding domain
SYNPCC7002_A0448	SM01274	SYNPCC7002_A0448
SYNPCC7002_A0453	SM00331	Sigma factor PP2C-like phosphatases
SYNPCC7002_A0453	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
SYNPCC7002_A0459	SM00220	Serine/Threonine protein kinases, catalytic domain
SYNPCC7002_A0467	SM00460	Transglutaminase/protease-like homologues
SYNPCC7002_A0474	SM00240	Forkhead associated domain
SYNPCC7002_A0475	SM00363	S4 RNA-binding domain
SYNPCC7002_A0479	SM00327	von Willebrand factor (vWF) type A domain
SYNPCC7002_A0486	SM00448	cheY-homologous receiver domain
SYNPCC7002_A0486	SM00862	Transcriptional regulatory protein, C terminal
SYNPCC7002_A0496	SM00448	cheY-homologous receiver domain
SYNPCC7002_A0496	SM00862	Transcriptional regulatory protein, C terminal
SYNPCC7002_A0497	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A0505	SM01321	SYNPCC7002_A0505
SYNPCC7002_A0509	SM00849	Metallo-beta-lactamase superfamily
SYNPCC7002_A0521	SM00014	Acid phosphatase homologues
SYNPCC7002_A0540	SM00271	DnaJ molecular chaperone homology domain
SYNPCC7002_A0547	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
SYNPCC7002_A0549	SM00481	DNA polymerase alpha chain like domain
SYNPCC7002_A0554	SM01007	Class II Aldolase and Adducin N-terminal domain
SYNPCC7002_A0563	SM00116	Domain in cystathionine beta-synthase and other proteins.
SYNPCC7002_A0564	SM00756	SYNPCC7002_A0564
SYNPCC7002_A0565	SM00852	Probable molybdopterin binding domain
SYNPCC7002_A0566	SM00903	Flavin reductase like domain
SYNPCC7002_A0568	SM00754	A domain in the BMP inhibitor chordin and in microbial proteins.
SYNPCC7002_A0574	SM00955	SYNPCC7002_A0574
SYNPCC7002_A0578	SM00646	SYNPCC7002_A0578
SYNPCC7002_A0584	SM00287	Bacterial SH3 domain homologues
SYNPCC7002_A0584	SM00646	SYNPCC7002_A0584
SYNPCC7002_A0588	SM00226	Low molecular weight phosphatase family
SYNPCC7002_A0590	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SYNPCC7002_A0592	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SYNPCC7002_A0596	SM00327	von Willebrand factor (vWF) type A domain
SYNPCC7002_A0596	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A0599	SM00836	DALR anticodon binding domain
SYNPCC7002_A0599	SM01016	Arginyl tRNA synthetase N terminal dom
SYNPCC7002_A0608	SM00421	helix_turn_helix, Lux Regulon
SYNPCC7002_A0608	SM00448	cheY-homologous receiver domain
SYNPCC7002_A0610	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
SYNPCC7002_A0613	SM00487	DEAD-like helicases superfamily
SYNPCC7002_A0613	SM00490	helicase superfamily c-terminal domain
SYNPCC7002_A0615	SM00448	cheY-homologous receiver domain
SYNPCC7002_A0618	SM00487	DEAD-like helicases superfamily
SYNPCC7002_A0618	SM00490	helicase superfamily c-terminal domain
SYNPCC7002_A0619	SM00729	Elongator protein 3, MiaB family, Radical SAM
SYNPCC7002_A0622	SM00028	Tetratricopeptide repeats
SYNPCC7002_A0622	SM00271	DnaJ molecular chaperone homology domain
SYNPCC7002_A0626	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A0628	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
SYNPCC7002_A0641	SM00421	helix_turn_helix, Lux Regulon
SYNPCC7002_A0643	SM01116	SYNPCC7002_A0643
SYNPCC7002_A0649	SM00853	MutL C terminal dimerisation domain
SYNPCC7002_A0649	SM01340	SYNPCC7002_A0649
SYNPCC7002_A0655	SM00861	Transketolase, pyrimidine binding domain
SYNPCC7002_A0659	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SYNPCC7002_A0659	SM00421	helix_turn_helix, Lux Regulon
SYNPCC7002_A0660	SM00507	HNH nucleases
SYNPCC7002_A0665	SM00729	Elongator protein 3, MiaB family, Radical SAM
SYNPCC7002_A0689	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SYNPCC7002_A0689	SM00387	Histidine kinase-like ATPases
SYNPCC7002_A0689	SM00388	His Kinase A (phosphoacceptor) domain
SYNPCC7002_A0689	SM00448	cheY-homologous receiver domain
SYNPCC7002_A0693	SM00271	DnaJ molecular chaperone homology domain
SYNPCC7002_A0696	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A0697	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A0705	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A0712	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A0713	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A0720	SM00988	UreE urease accessory protein, N-terminal domain
SYNPCC7002_A0730	SM00917	LeuA allosteric (dimerisation) domain
SYNPCC7002_A0749	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A0753	SM00322	K homology RNA-binding domain
SYNPCC7002_A0756	SM01133	SYNPCC7002_A0756
SYNPCC7002_A0764	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A0769	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A0771	SM00852	Probable molybdopterin binding domain
SYNPCC7002_A0773	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
SYNPCC7002_A0785	SM00729	Elongator protein 3, MiaB family, Radical SAM
SYNPCC7002_A0788	SM00316	Ribosomal protein S1-like RNA-binding domain
SYNPCC7002_A0791	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SYNPCC7002_A0796	SM00930	SYNPCC7002_A0796
SYNPCC7002_A0799	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A0807	SM00028	Tetratricopeptide repeats
SYNPCC7002_A0814	SM00562	SYNPCC7002_A0814
SYNPCC7002_A0819	SM00670	Large family of predicted nucleotide-binding domains
SYNPCC7002_A0821	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A0826	SM00434	DNA Topoisomerase IV
SYNPCC7002_A0834	SM00388	His Kinase A (phosphoacceptor) domain
SYNPCC7002_A0843	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SYNPCC7002_A0843	SM00245	tail specific protease
SYNPCC7002_A0848	SM00267	diguanylate cyclase
SYNPCC7002_A0851	SM00448	cheY-homologous receiver domain
SYNPCC7002_A0851	SM00862	Transcriptional regulatory protein, C terminal
SYNPCC7002_A0852	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SYNPCC7002_A0853	SM01094	CpcD/allophycocyanin linker domain
SYNPCC7002_A0859	SM00342	helix_turn_helix, arabinose operon control protein
SYNPCC7002_A0859	SM00448	cheY-homologous receiver domain
SYNPCC7002_A0862	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A0863	SM01116	SYNPCC7002_A0863
SYNPCC7002_A0865	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SYNPCC7002_A0865	SM00387	Histidine kinase-like ATPases
SYNPCC7002_A0865	SM00388	His Kinase A (phosphoacceptor) domain
SYNPCC7002_A0867	SM00387	Histidine kinase-like ATPases
SYNPCC7002_A0867	SM00388	His Kinase A (phosphoacceptor) domain
SYNPCC7002_A0867	SM00448	cheY-homologous receiver domain
SYNPCC7002_A0868	SM00829	Enoylreductase
SYNPCC7002_A0870	SM00220	Serine/Threonine protein kinases, catalytic domain
SYNPCC7002_A0871	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A0882	SM00788	Adenylosuccinate synthetase
SYNPCC7002_A0885	SM00642	Alpha-amylase domain
SYNPCC7002_A0890	SM00881	CoA binding domain
SYNPCC7002_A0894	SM00729	Elongator protein 3, MiaB family, Radical SAM
SYNPCC7002_A0897	SM00650	Ribosomal RNA adenine dimethylases
SYNPCC7002_A0900	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SYNPCC7002_A0900	SM00387	Histidine kinase-like ATPases
SYNPCC7002_A0900	SM00388	His Kinase A (phosphoacceptor) domain
SYNPCC7002_A0900	SM00448	cheY-homologous receiver domain
SYNPCC7002_A0902	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A0905	SM01001	AIR carboxylase
SYNPCC7002_A0906	SM00331	Sigma factor PP2C-like phosphatases
SYNPCC7002_A0906	SM00448	cheY-homologous receiver domain
SYNPCC7002_A0907	SM00450	Rhodanese Homology Domain
SYNPCC7002_A0909	SM01118	SYNPCC7002_A0909
SYNPCC7002_A0910	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A0920	SM01248	SYNPCC7002_A0920
SYNPCC7002_A0927	SM00240	Forkhead associated domain
SYNPCC7002_A0937	SM00448	cheY-homologous receiver domain
SYNPCC7002_A0937	SM00862	Transcriptional regulatory protein, C terminal
SYNPCC7002_A0939	SM00052	Putative diguanylate phosphodiesterase
SYNPCC7002_A0939	SM00267	diguanylate cyclase
SYNPCC7002_A0939	SM00448	cheY-homologous receiver domain
SYNPCC7002_A0946	SM00732	Likely ribonuclease with RNase H fold.
SYNPCC7002_A0955	SM00316	Ribosomal protein S1-like RNA-binding domain
SYNPCC7002_A0958	SM00363	S4 RNA-binding domain
SYNPCC7002_A0973	SM00226	Low molecular weight phosphatase family
SYNPCC7002_A0974	SM00198	SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extracellular domains.
SYNPCC7002_A0977	SM00028	Tetratricopeptide repeats
SYNPCC7002_A0978	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A0979	SM00448	cheY-homologous receiver domain
SYNPCC7002_A0979	SM00862	Transcriptional regulatory protein, C terminal
SYNPCC7002_A0986	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
SYNPCC7002_A0986	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
SYNPCC7002_A0992	SM00393	Putative single-stranded nucleic acids-binding domain
SYNPCC7002_A0994	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A0995	SM00287	Bacterial SH3 domain homologues
SYNPCC7002_A0996	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SYNPCC7002_A0996	SM00091	PAS domain
SYNPCC7002_A0996	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SYNPCC7002_A0996	SM00387	Histidine kinase-like ATPases
SYNPCC7002_A0996	SM00388	His Kinase A (phosphoacceptor) domain
SYNPCC7002_A0996	SM00448	cheY-homologous receiver domain
SYNPCC7002_A0997	SM00073	Histidine Phosphotransfer domain
SYNPCC7002_A1002	SM00825	Beta-ketoacyl synthase
SYNPCC7002_A1005	SM00487	DEAD-like helicases superfamily
SYNPCC7002_A1005	SM00490	helicase superfamily c-terminal domain
SYNPCC7002_A1010	SM01207	SYNPCC7002_A1010
SYNPCC7002_A1014	SM00909	Sporulation and spore germination
SYNPCC7002_A1015	SM00240	Forkhead associated domain
SYNPCC7002_A1017	SM00950	SYNPCC7002_A1017
SYNPCC7002_A1022	SM00861	Transketolase, pyrimidine binding domain
SYNPCC7002_A1023	SM00825	Beta-ketoacyl synthase
SYNPCC7002_A1029	SM00649	Ribosomal protein L11/L12
SYNPCC7002_A1030	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
SYNPCC7002_A1030	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
SYNPCC7002_A1036	SM00937	SYNPCC7002_A1036
SYNPCC7002_A1042	SM00662	RNA polymerases D
SYNPCC7002_A1045	SM00316	Ribosomal protein S1-like RNA-binding domain
SYNPCC7002_A1054	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
SYNPCC7002_A1055	SM01374	SYNPCC7002_A1055
SYNPCC7002_A1059	SM00322	K homology RNA-binding domain
SYNPCC7002_A1062	SM01382	SYNPCC7002_A1062
SYNPCC7002_A1062	SM01383	SYNPCC7002_A1062
SYNPCC7002_A1066	SM00316	Ribosomal protein S1-like RNA-binding domain
SYNPCC7002_A1066	SM00322	K homology RNA-binding domain
SYNPCC7002_A1077	SM00100	Cyclic nucleotide-monophosphate binding domain
SYNPCC7002_A1083	SM00603	SYNPCC7002_A1083
SYNPCC7002_A1096	SM01057	Eukaryotic-type carbonic anhydrase
SYNPCC7002_A1103	SM00563	Phosphate acyltransferases
SYNPCC7002_A1104	SM00073	Histidine Phosphotransfer domain
SYNPCC7002_A1107	SM00967	RNA 2'-O ribose methyltransferase substrate binding
SYNPCC7002_A1110	SM00448	cheY-homologous receiver domain
SYNPCC7002_A1111	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SYNPCC7002_A1111	SM00387	Histidine kinase-like ATPases
SYNPCC7002_A1111	SM00388	His Kinase A (phosphoacceptor) domain
SYNPCC7002_A1112	SM01228	SYNPCC7002_A1112
SYNPCC7002_A1118	SM00968	SMC proteins Flexible Hinge Domain
SYNPCC7002_A1121	SM01034	Sensors of blue-light using FAD
SYNPCC7002_A1124	SM00240	Forkhead associated domain
SYNPCC7002_A1153	SM00855	Phosphoglycerate mutase family
SYNPCC7002_A1172	SM00861	Transketolase, pyrimidine binding domain
SYNPCC7002_A1173	SM00822	SYNPCC7002_A1173
SYNPCC7002_A1173	SM00823	Phosphopantetheine attachment site
SYNPCC7002_A1173	SM00825	Beta-ketoacyl synthase
SYNPCC7002_A1173	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SYNPCC7002_A1173	SM01294	SYNPCC7002_A1173
SYNPCC7002_A1175	SM01234	SYNPCC7002_A1175
SYNPCC7002_A1176	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A1181	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A1183	SM00897	FIST N domain
SYNPCC7002_A1183	SM01204	SYNPCC7002_A1183
SYNPCC7002_A1210	SM01091	Transporter associated domain
SYNPCC7002_A1224	SM00448	cheY-homologous receiver domain
SYNPCC7002_A1227	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A1232	SM00419	helix_turn_helix, cAMP Regulatory protein
SYNPCC7002_A1238	SM00450	Rhodanese Homology Domain
SYNPCC7002_A1252	SM00872	Alpha mannosidase, middle domain
SYNPCC7002_A1259	SM00957	SecA DEAD-like domain
SYNPCC7002_A1259	SM00958	SecA preprotein cross-linking domain
SYNPCC7002_A1261	SM00091	PAS domain
SYNPCC7002_A1261	SM00387	Histidine kinase-like ATPases
SYNPCC7002_A1261	SM00388	His Kinase A (phosphoacceptor) domain
SYNPCC7002_A1261	SM00448	cheY-homologous receiver domain
SYNPCC7002_A1263	SM00480	DNA polymerase III beta subunit
SYNPCC7002_A1264	SM01093	SYNPCC7002_A1264
SYNPCC7002_A1268	SM00360	RNA recognition motif
SYNPCC7002_A1270	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SYNPCC7002_A1273	SM00849	Metallo-beta-lactamase superfamily
SYNPCC7002_A1274	SM01130	SYNPCC7002_A1274
SYNPCC7002_A1275	SM00859	Semialdehyde dehydrogenase, NAD binding domain
SYNPCC7002_A1280	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
SYNPCC7002_A1280	SM00474	3'-5' exonuclease
SYNPCC7002_A1280	SM00475	5'-3' exonuclease
SYNPCC7002_A1280	SM00482	DNA polymerase A domain
SYNPCC7002_A1285	SM00938	Nitrogen regulatory protein P-II
SYNPCC7002_A1287	SM00487	DEAD-like helicases superfamily
SYNPCC7002_A1287	SM00490	helicase superfamily c-terminal domain
SYNPCC7002_A1287	SM00982	SYNPCC7002_A1287
SYNPCC7002_A1287	SM01058	CarD-like/TRCF domain
SYNPCC7002_A1308	SM00448	cheY-homologous receiver domain
SYNPCC7002_A1308	SM00862	Transcriptional regulatory protein, C terminal
SYNPCC7002_A1309	SM00305	Hint (Hedgehog/Intein) domain C-terminal region
SYNPCC7002_A1309	SM00507	HNH nucleases
SYNPCC7002_A1314	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
SYNPCC7002_A1321	SM00849	Metallo-beta-lactamase superfamily
SYNPCC7002_A1321	SM00903	Flavin reductase like domain
SYNPCC7002_A1325	SM00116	Domain in cystathionine beta-synthase and other proteins.
SYNPCC7002_A1343	SM00387	Histidine kinase-like ATPases
SYNPCC7002_A1343	SM00433	TopoisomeraseII
SYNPCC7002_A1345	SM00400	zinc finger
SYNPCC7002_A1345	SM00493	SYNPCC7002_A1345
SYNPCC7002_A1349	SM00729	Elongator protein 3, MiaB family, Radical SAM
SYNPCC7002_A1354	SM00387	Histidine kinase-like ATPases
SYNPCC7002_A1354	SM00388	His Kinase A (phosphoacceptor) domain
SYNPCC7002_A1354	SM00448	cheY-homologous receiver domain
SYNPCC7002_A1355	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SYNPCC7002_A1355	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SYNPCC7002_A1355	SM00091	PAS domain
SYNPCC7002_A1355	SM00267	diguanylate cyclase
SYNPCC7002_A1356	SM00917	LeuA allosteric (dimerisation) domain
SYNPCC7002_A1361	SM00729	Elongator protein 3, MiaB family, Radical SAM
SYNPCC7002_A1363	SM00387	Histidine kinase-like ATPases
SYNPCC7002_A1363	SM00388	His Kinase A (phosphoacceptor) domain
SYNPCC7002_A1372	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SYNPCC7002_A1372	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SYNPCC7002_A1373	SM00260	Two component signalling adaptor domain
SYNPCC7002_A1374	SM00448	cheY-homologous receiver domain
SYNPCC7002_A1375	SM00448	cheY-homologous receiver domain
SYNPCC7002_A1382	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SYNPCC7002_A1382	SM00091	PAS domain
SYNPCC7002_A1382	SM00387	Histidine kinase-like ATPases
SYNPCC7002_A1382	SM00388	His Kinase A (phosphoacceptor) domain
SYNPCC7002_A1382	SM00448	cheY-homologous receiver domain
SYNPCC7002_A1384	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SYNPCC7002_A1384	SM00387	Histidine kinase-like ATPases
SYNPCC7002_A1384	SM00388	His Kinase A (phosphoacceptor) domain
SYNPCC7002_A1388	SM00248	ankyrin repeats
SYNPCC7002_A1390	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A1403	SM00232	JAB/MPN domain
SYNPCC7002_A1405	SM00091	PAS domain
SYNPCC7002_A1405	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SYNPCC7002_A1405	SM00387	Histidine kinase-like ATPases
SYNPCC7002_A1405	SM00388	His Kinase A (phosphoacceptor) domain
SYNPCC7002_A1406	SM01209	SYNPCC7002_A1406
SYNPCC7002_A1406	SM01210	SYNPCC7002_A1406
SYNPCC7002_A1408	SM00306	Hint (Hedgehog/Intein) domain N-terminal region
SYNPCC7002_A1408	SM00481	DNA polymerase alpha chain like domain
SYNPCC7002_A1412	SM00567	E-Z type HEAT repeats
SYNPCC7002_A1417	SM00729	Elongator protein 3, MiaB family, Radical SAM
SYNPCC7002_A1421	SM00886	Stress responsive A/B Barrel Domain
SYNPCC7002_A1434	SM00933	SYNPCC7002_A1434
SYNPCC7002_A1436	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A1440	SM00567	E-Z type HEAT repeats
SYNPCC7002_A1443	SM00890	Domain of unknown function
SYNPCC7002_A1448	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A1451	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SYNPCC7002_A1451	SM00387	Histidine kinase-like ATPases
SYNPCC7002_A1451	SM00388	His Kinase A (phosphoacceptor) domain
SYNPCC7002_A1452	SM00448	cheY-homologous receiver domain
SYNPCC7002_A1452	SM00862	Transcriptional regulatory protein, C terminal
SYNPCC7002_A1457	SM00419	helix_turn_helix, cAMP Regulatory protein
SYNPCC7002_A1469	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
SYNPCC7002_A1472	SM00854	Bacterial capsule synthesis protein PGA_cap
SYNPCC7002_A1482	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A1496	SM00450	Rhodanese Homology Domain
SYNPCC7002_A1499	SM00116	Domain in cystathionine beta-synthase and other proteins.
SYNPCC7002_A1499	SM00267	diguanylate cyclase
SYNPCC7002_A1505	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A1534	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A1534	SM00994	ClpX C4-type zinc finger
SYNPCC7002_A1534	SM01086	C-terminal, D2-small domain, of ClpB protein
SYNPCC7002_A1543	SM00316	Ribosomal protein S1-like RNA-binding domain
SYNPCC7002_A1543	SM00357	Cold shock protein domain
SYNPCC7002_A1543	SM00955	SYNPCC7002_A1543
SYNPCC7002_A1545	SM01211	SYNPCC7002_A1545
SYNPCC7002_A1548	SM00387	Histidine kinase-like ATPases
SYNPCC7002_A1548	SM00388	His Kinase A (phosphoacceptor) domain
SYNPCC7002_A1548	SM00448	cheY-homologous receiver domain
SYNPCC7002_A1566	SM00028	Tetratricopeptide repeats
SYNPCC7002_A1573	SM00507	HNH nucleases
SYNPCC7002_A1576	SM00448	cheY-homologous receiver domain
SYNPCC7002_A1577	SM00729	Elongator protein 3, MiaB family, Radical SAM
SYNPCC7002_A1592	SM00849	Metallo-beta-lactamase superfamily
SYNPCC7002_A1619	SM00567	E-Z type HEAT repeats
SYNPCC7002_A1622	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A1622	SM00962	SRP54-type protein, GTPase domain
SYNPCC7002_A1622	SM00963	SRP54-type protein, helical bundle domain
SYNPCC7002_A1627	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A1629	SM00360	RNA recognition motif
SYNPCC7002_A1630	SM01230	SYNPCC7002_A1630
SYNPCC7002_A1639	SM00260	Two component signalling adaptor domain
SYNPCC7002_A1639	SM00387	Histidine kinase-like ATPases
SYNPCC7002_A1639	SM00448	cheY-homologous receiver domain
SYNPCC7002_A1639	SM01231	SYNPCC7002_A1639
SYNPCC7002_A1641	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SYNPCC7002_A1641	SM00387	Histidine kinase-like ATPases
SYNPCC7002_A1641	SM00388	His Kinase A (phosphoacceptor) domain
SYNPCC7002_A1648	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A1654	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SYNPCC7002_A1657	SM00831	Cation transporter/ATPase, N-terminus
SYNPCC7002_A1665	SM00220	Serine/Threonine protein kinases, catalytic domain
SYNPCC7002_A1672	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
SYNPCC7002_A1673	SM00732	Likely ribonuclease with RNase H fold.
SYNPCC7002_A1675	SM00100	Cyclic nucleotide-monophosphate binding domain
SYNPCC7002_A1675	SM00419	helix_turn_helix, cAMP Regulatory protein
SYNPCC7002_A1681	SM00981	SYNPCC7002_A1681
SYNPCC7002_A1682	SM00220	Serine/Threonine protein kinases, catalytic domain
SYNPCC7002_A1691	SM00798	AICARFT/IMPCHase bienzyme
SYNPCC7002_A1691	SM00851	MGS-like domain
SYNPCC7002_A1699	SM00028	Tetratricopeptide repeats
SYNPCC7002_A1704	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A1705	SM00028	Tetratricopeptide repeats
SYNPCC7002_A1707	SM00487	DEAD-like helicases superfamily
SYNPCC7002_A1707	SM00490	helicase superfamily c-terminal domain
SYNPCC7002_A1722	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A1727	SM00220	Serine/Threonine protein kinases, catalytic domain
SYNPCC7002_A1727	SM00320	WD40 repeats
SYNPCC7002_A1734	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A1736	SM00028	Tetratricopeptide repeats
SYNPCC7002_A1738	SM00271	DnaJ molecular chaperone homology domain
SYNPCC7002_A1743	SM00849	Metallo-beta-lactamase superfamily
SYNPCC7002_A1743	SM00903	Flavin reductase like domain
SYNPCC7002_A1744	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SYNPCC7002_A1744	SM00493	SYNPCC7002_A1744
SYNPCC7002_A1752	SM00603	SYNPCC7002_A1752
SYNPCC7002_A1753	SM01004	Delta-aminolevulinic acid dehydratase
SYNPCC7002_A1771	SM00490	helicase superfamily c-terminal domain
SYNPCC7002_A1782	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
SYNPCC7002_A1788	SM00331	Sigma factor PP2C-like phosphatases
SYNPCC7002_A1788	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
SYNPCC7002_A1789	SM00100	Cyclic nucleotide-monophosphate binding domain
SYNPCC7002_A1789	SM00419	helix_turn_helix, cAMP Regulatory protein
SYNPCC7002_A1794	SM00930	SYNPCC7002_A1794
SYNPCC7002_A1796	SM00961	Ribulose bisphosphate carboxylase, small chain
SYNPCC7002_A1800	SM00961	Ribulose bisphosphate carboxylase, small chain
SYNPCC7002_A1802	SM00877	SYNPCC7002_A1802
SYNPCC7002_A1803	SM00877	SYNPCC7002_A1803
SYNPCC7002_A1813	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A1816	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
SYNPCC7002_A1816	SM01232	SYNPCC7002_A1816
SYNPCC7002_A1823	SM01387	SYNPCC7002_A1823
SYNPCC7002_A1844	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SYNPCC7002_A1844	SM00245	tail specific protease
SYNPCC7002_A1846	SM00072	Guanylate kinase homologues.
SYNPCC7002_A1856	SM00487	DEAD-like helicases superfamily
SYNPCC7002_A1856	SM00490	helicase superfamily c-terminal domain
SYNPCC7002_A1859	SM00052	Putative diguanylate phosphodiesterase
SYNPCC7002_A1859	SM00267	diguanylate cyclase
SYNPCC7002_A1861	SM00100	Cyclic nucleotide-monophosphate binding domain
SYNPCC7002_A1862	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SYNPCC7002_A1864	SM00849	Metallo-beta-lactamase superfamily
SYNPCC7002_A1865	SM00642	Alpha-amylase domain
SYNPCC7002_A1882	SM00530	Helix-turn-helix XRE-family like proteins 
SYNPCC7002_A1895	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A1896	SM00240	Forkhead associated domain
SYNPCC7002_A1898	SM00155	Phospholipase D. Active site motifs.
SYNPCC7002_A1898	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SYNPCC7002_A1899	SM00028	Tetratricopeptide repeats
SYNPCC7002_A1900	SM00341	Helicase and RNase D C-terminal
SYNPCC7002_A1900	SM00487	DEAD-like helicases superfamily
SYNPCC7002_A1900	SM00490	helicase superfamily c-terminal domain
SYNPCC7002_A1900	SM00956	SYNPCC7002_A1900
SYNPCC7002_A1902	SM00387	Histidine kinase-like ATPases
SYNPCC7002_A1906	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
SYNPCC7002_A1906	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SYNPCC7002_A1911	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SYNPCC7002_A1915	SM00729	Elongator protein 3, MiaB family, Radical SAM
SYNPCC7002_A1925	SM00271	DnaJ molecular chaperone homology domain
SYNPCC7002_A1926	SM00240	Forkhead associated domain
SYNPCC7002_A1928	SM01094	CpcD/allophycocyanin linker domain
SYNPCC7002_A1937	SM00448	cheY-homologous receiver domain
SYNPCC7002_A1938	SM00434	DNA Topoisomerase IV
SYNPCC7002_A1954	SM00387	Histidine kinase-like ATPases
SYNPCC7002_A1955	SM00421	helix_turn_helix, Lux Regulon
SYNPCC7002_A1955	SM00448	cheY-homologous receiver domain
SYNPCC7002_A1965	SM00411	bacterial (prokaryotic) histone like domain
SYNPCC7002_A1978	SM00822	SYNPCC7002_A1978
SYNPCC7002_A1979	SM00823	Phosphopantetheine attachment site
SYNPCC7002_A1979	SM01294	SYNPCC7002_A1979
SYNPCC7002_A1990	SM00729	Elongator protein 3, MiaB family, Radical SAM
SYNPCC7002_A1995	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A1996	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A1997	SM00947	Carbonic anhydrase
SYNPCC7002_A2002	SM00450	Rhodanese Homology Domain
SYNPCC7002_A2015	SM00881	CoA binding domain
SYNPCC7002_A2022	SM00642	Alpha-amylase domain
SYNPCC7002_A2025	SM00877	SYNPCC7002_A2025
SYNPCC7002_A2033	SM00421	helix_turn_helix, Lux Regulon
SYNPCC7002_A2033	SM00448	cheY-homologous receiver domain
SYNPCC7002_A2039	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A2044	SM00663	RNA polymerase I subunit A N-terminus
SYNPCC7002_A2054	SM00474	3'-5' exonuclease
SYNPCC7002_A2059	SM00464	Found in ATP-dependent protease La (LON)
SYNPCC7002_A2060	SM01403	SYNPCC7002_A2060
SYNPCC7002_A2062	SM00838	Elongation factor G C-terminus
SYNPCC7002_A2062	SM00889	Elongation factor G, domain IV
SYNPCC7002_A2069	SM00996	S-adenosyl-L-homocysteine hydrolase
SYNPCC7002_A2069	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
SYNPCC7002_A2073	SM00046	Diacylglycerol kinase catalytic domain (presumed)
SYNPCC7002_A2078	SM00028	Tetratricopeptide repeats
SYNPCC7002_A2079	SM00838	Elongation factor G C-terminus
SYNPCC7002_A2079	SM00889	Elongation factor G, domain IV
SYNPCC7002_A2083	SM00363	S4 RNA-binding domain
SYNPCC7002_A2083	SM01390	SYNPCC7002_A2083
SYNPCC7002_A2100	SM00091	PAS domain
SYNPCC7002_A2100	SM00387	Histidine kinase-like ATPases
SYNPCC7002_A2100	SM00388	His Kinase A (phosphoacceptor) domain
SYNPCC7002_A2102	SM00859	Semialdehyde dehydrogenase, NAD binding domain
SYNPCC7002_A2106	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A2108	SM00831	Cation transporter/ATPase, N-terminus
SYNPCC7002_A2113	SM00460	Transglutaminase/protease-like homologues
SYNPCC7002_A2115	SM00091	PAS domain
SYNPCC7002_A2115	SM00331	Sigma factor PP2C-like phosphatases
SYNPCC7002_A2115	SM00448	cheY-homologous receiver domain
SYNPCC7002_A2127	SM00878	Biotin carboxylase C-terminal domain
SYNPCC7002_A2159	SM00028	Tetratricopeptide repeats
SYNPCC7002_A2161	SM00271	DnaJ molecular chaperone homology domain
SYNPCC7002_A2167	SM00052	Putative diguanylate phosphodiesterase
SYNPCC7002_A2176	SM00028	Tetratricopeptide repeats
SYNPCC7002_A2179	SM00062	Bacterial periplasmic substrate-binding proteins
SYNPCC7002_A2189	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A2190	SM00829	Enoylreductase
SYNPCC7002_A2211	SM01094	CpcD/allophycocyanin linker domain
SYNPCC7002_A2212	SM01094	CpcD/allophycocyanin linker domain
SYNPCC7002_A2213	SM00567	E-Z type HEAT repeats
SYNPCC7002_A2223	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A2230	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A2235	SM00235	Zinc-dependent metalloprotease
SYNPCC7002_A2252	SM00487	DEAD-like helicases superfamily
SYNPCC7002_A2252	SM00490	helicase superfamily c-terminal domain
SYNPCC7002_A2252	SM01142	SYNPCC7002_A2252
SYNPCC7002_A2255	SM00487	DEAD-like helicases superfamily
SYNPCC7002_A2255	SM00490	helicase superfamily c-terminal domain
SYNPCC7002_A2256	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A2270	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A2271	SM00387	Histidine kinase-like ATPases
SYNPCC7002_A2271	SM00388	His Kinase A (phosphoacceptor) domain
SYNPCC7002_A2303	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SYNPCC7002_A2340	SM00984	UDP binding domain
SYNPCC7002_A2350	SM00880	SYNPCC7002_A2350
SYNPCC7002_A2353	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A2353	SM01086	C-terminal, D2-small domain, of ClpB protein
SYNPCC7002_A2354	SM01329	SYNPCC7002_A2354
SYNPCC7002_A2357	SM00363	S4 RNA-binding domain
SYNPCC7002_A2363	SM00316	Ribosomal protein S1-like RNA-binding domain
SYNPCC7002_A2364	SM00052	Putative diguanylate phosphodiesterase
SYNPCC7002_A2364	SM00267	diguanylate cyclase
SYNPCC7002_A2364	SM00448	cheY-homologous receiver domain
SYNPCC7002_A2365	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SYNPCC7002_A2365	SM00387	Histidine kinase-like ATPases
SYNPCC7002_A2365	SM00388	His Kinase A (phosphoacceptor) domain
SYNPCC7002_A2367	SM00822	SYNPCC7002_A2367
SYNPCC7002_A2370	SM00925	MltA specific insert domain
SYNPCC7002_A2389	SM00877	SYNPCC7002_A2389
SYNPCC7002_A2396	SM00563	Phosphate acyltransferases
SYNPCC7002_A2397	SM00849	Metallo-beta-lactamase superfamily
SYNPCC7002_A2398	SM00904	Riboflavin kinase
SYNPCC7002_A2409	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SYNPCC7002_A2421	SM00838	Elongation factor G C-terminus
SYNPCC7002_A2426	SM00028	Tetratricopeptide repeats
SYNPCC7002_A2452	SM00729	Elongator protein 3, MiaB family, Radical SAM
SYNPCC7002_A2455	SM00478	endonuclease III
SYNPCC7002_A2455	SM00525	SYNPCC7002_A2455
SYNPCC7002_A2457	SM00883	Chaperonin 10 Kd subunit
SYNPCC7002_A2461	SM00052	Putative diguanylate phosphodiesterase
SYNPCC7002_A2461	SM00062	Bacterial periplasmic substrate-binding proteins
SYNPCC7002_A2461	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SYNPCC7002_A2461	SM00091	PAS domain
SYNPCC7002_A2461	SM00267	diguanylate cyclase
SYNPCC7002_A2466	SM01018	B12 binding domain
SYNPCC7002_A2471	SM00028	Tetratricopeptide repeats
SYNPCC7002_A2477	SM00267	diguanylate cyclase
SYNPCC7002_A2488	SM00851	MGS-like domain
SYNPCC7002_A2488	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
SYNPCC7002_A2489	SM01005	Alanine racemase, C-terminal domain
SYNPCC7002_A2490	SM00460	Transglutaminase/protease-like homologues
SYNPCC7002_A2491	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SYNPCC7002_A2500	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A2504	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SYNPCC7002_A2504	SM00091	PAS domain
SYNPCC7002_A2504	SM00387	Histidine kinase-like ATPases
SYNPCC7002_A2504	SM00388	His Kinase A (phosphoacceptor) domain
SYNPCC7002_A2504	SM00448	cheY-homologous receiver domain
SYNPCC7002_A2505	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
SYNPCC7002_A2514	SM00271	DnaJ molecular chaperone homology domain
SYNPCC7002_A2523	SM00421	helix_turn_helix, Lux Regulon
SYNPCC7002_A2523	SM00448	cheY-homologous receiver domain
SYNPCC7002_A2525	SM00852	Probable molybdopterin binding domain
SYNPCC7002_A2534	SM00448	cheY-homologous receiver domain
SYNPCC7002_A2536	SM00845	GatB domain
SYNPCC7002_A2542	SM00358	Double-stranded RNA binding motif
SYNPCC7002_A2542	SM00535	Ribonuclease III family
SYNPCC7002_A2546	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
SYNPCC7002_A2546	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
SYNPCC7002_A2546	SM00493	SYNPCC7002_A2546
SYNPCC7002_A2553	SM00028	Tetratricopeptide repeats
SYNPCC7002_A2554	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A2559	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SYNPCC7002_A2560	SM00855	Phosphoglycerate mutase family
SYNPCC7002_A2562	SM00028	Tetratricopeptide repeats
SYNPCC7002_A2564	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SYNPCC7002_A2571	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A2571	SM00393	Putative single-stranded nucleic acids-binding domain
SYNPCC7002_A2573	SM01359	SYNPCC7002_A2573
SYNPCC7002_A2573	SM01360	SYNPCC7002_A2573
SYNPCC7002_A2575	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SYNPCC7002_A2575	SM00387	Histidine kinase-like ATPases
SYNPCC7002_A2575	SM00388	His Kinase A (phosphoacceptor) domain
SYNPCC7002_A2581	SM00463	Small MutS-related domain
SYNPCC7002_A2581	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
SYNPCC7002_A2581	SM00534	ATPase domain of DNA mismatch repair MUTS family
SYNPCC7002_A2585	SM00331	Sigma factor PP2C-like phosphatases
SYNPCC7002_A2585	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
SYNPCC7002_A2587	SM00052	Putative diguanylate phosphodiesterase
SYNPCC7002_A2587	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SYNPCC7002_A2587	SM00091	PAS domain
SYNPCC7002_A2587	SM00267	diguanylate cyclase
SYNPCC7002_A2590	SM01007	Class II Aldolase and Adducin N-terminal domain
SYNPCC7002_A2593	SM00271	DnaJ molecular chaperone homology domain
SYNPCC7002_A2598	SM00073	Histidine Phosphotransfer domain
SYNPCC7002_A2598	SM00260	Two component signalling adaptor domain
SYNPCC7002_A2598	SM00387	Histidine kinase-like ATPases
SYNPCC7002_A2598	SM00448	cheY-homologous receiver domain
SYNPCC7002_A2599	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SYNPCC7002_A2599	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SYNPCC7002_A2601	SM00448	cheY-homologous receiver domain
SYNPCC7002_A2602	SM00448	cheY-homologous receiver domain
SYNPCC7002_A2606	SM00244	prohibitin homologues
SYNPCC7002_A2612	SM00877	SYNPCC7002_A2612
SYNPCC7002_A2613	SM00877	SYNPCC7002_A2613
SYNPCC7002_A2622	SM00855	Phosphoglycerate mutase family
SYNPCC7002_A2626	SM00028	Tetratricopeptide repeats
SYNPCC7002_A2642	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
SYNPCC7002_A2644	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SYNPCC7002_A2644	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SYNPCC7002_A2644	SM00091	PAS domain
SYNPCC7002_A2644	SM00387	Histidine kinase-like ATPases
SYNPCC7002_A2644	SM00388	His Kinase A (phosphoacceptor) domain
SYNPCC7002_A2646	SM00028	Tetratricopeptide repeats
SYNPCC7002_A2647	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SYNPCC7002_A2647	SM00292	breast cancer carboxy-terminal domain
SYNPCC7002_A2647	SM00532	Ligase N family
SYNPCC7002_A2653	SM00998	Adenylosuccinate lyase C-terminus
SYNPCC7002_A2654	SM00052	Putative diguanylate phosphodiesterase
SYNPCC7002_A2655	SM00833	Cobalamin synthesis protein cobW C-terminal domain
SYNPCC7002_A2658	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
SYNPCC7002_A2669	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SYNPCC7002_A2674	SM00989	SYNPCC7002_A2674
SYNPCC7002_A2696	SM00244	prohibitin homologues
SYNPCC7002_A2697	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
SYNPCC7002_A2701	SM00331	Sigma factor PP2C-like phosphatases
SYNPCC7002_A2701	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
SYNPCC7002_A2721	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A2726	SM01400	SYNPCC7002_A2726
SYNPCC7002_A2728	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A2733	SM00240	Forkhead associated domain
SYNPCC7002_A2735	SM00220	Serine/Threonine protein kinases, catalytic domain
SYNPCC7002_A2741	SM00478	endonuclease III
SYNPCC7002_A2761	SM00327	von Willebrand factor (vWF) type A domain
SYNPCC7002_A2762	SM00363	S4 RNA-binding domain
SYNPCC7002_A2764	SM00257	Lysin motif
SYNPCC7002_A2774	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
SYNPCC7002_A2774	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
SYNPCC7002_A2789	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A2793	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A2793	SM00962	SRP54-type protein, GTPase domain
SYNPCC7002_A2793	SM00963	SRP54-type protein, helical bundle domain
SYNPCC7002_A2795	SM00363	S4 RNA-binding domain
SYNPCC7002_A2815	SM00267	diguanylate cyclase
SYNPCC7002_A2815	SM00448	cheY-homologous receiver domain
SYNPCC7002_A2816	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SYNPCC7002_A2816	SM00954	Region found in RelA / SpoT proteins
SYNPCC7002_A2818	SM00387	Histidine kinase-like ATPases
SYNPCC7002_A2818	SM00388	His Kinase A (phosphoacceptor) domain
SYNPCC7002_A2818	SM01248	SYNPCC7002_A2818
SYNPCC7002_A2826	SM01001	AIR carboxylase
SYNPCC7002_A2830	SM00670	Large family of predicted nucleotide-binding domains
SYNPCC7002_A2831	SM00729	Elongator protein 3, MiaB family, Radical SAM
SYNPCC7002_A2835	SM00387	Histidine kinase-like ATPases
SYNPCC7002_A2835	SM00388	His Kinase A (phosphoacceptor) domain
SYNPCC7002_A2835	SM00448	cheY-homologous receiver domain
SYNPCC7002_A2839	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_A2863	SM00267	diguanylate cyclase
SYNPCC7002_A2866	SM00849	Metallo-beta-lactamase superfamily
SYNPCC7002_A2867	SM00450	Rhodanese Homology Domain
SYNPCC7002_A2869	SM00052	Putative diguanylate phosphodiesterase
SYNPCC7002_A2869	SM00267	diguanylate cyclase
SYNPCC7002_A2869	SM00448	cheY-homologous receiver domain
SYNPCC7002_A2872	SM00327	von Willebrand factor (vWF) type A domain
SYNPCC7002_A2873	SM00840	SYNPCC7002_A2873
SYNPCC7002_C0006	SM00487	DEAD-like helicases superfamily
SYNPCC7002_C0009	SM00487	DEAD-like helicases superfamily
SYNPCC7002_C0009	SM00490	helicase superfamily c-terminal domain
SYNPCC7002_C0012	SM00670	Large family of predicted nucleotide-binding domains
SYNPCC7002_C0017	SM00857	Resolvase, N terminal domain
SYNPCC7002_D0010	SM00833	Cobalamin synthesis protein cobW C-terminal domain
SYNPCC7002_D0015	SM00530	Helix-turn-helix XRE-family like proteins 
SYNPCC7002_D0025	SM00487	DEAD-like helicases superfamily
SYNPCC7002_D0025	SM00490	helicase superfamily c-terminal domain
SYNPCC7002_E0018	SM00028	Tetratricopeptide repeats
SYNPCC7002_E0025	SM00477	DNA/RNA non-specific endonuclease
SYNPCC7002_E0025	SM00892	DNA/RNA non-specific endonuclease
SYNPCC7002_F0002	SM00470	ParB-like nuclease domain
SYNPCC7002_F0010	SM00966	SpoVT / AbrB like domain 
SYNPCC7002_F0016	SM00857	Resolvase, N terminal domain
SYNPCC7002_F0024	SM00530	Helix-turn-helix XRE-family like proteins 
SYNPCC7002_F0030	SM00966	SpoVT / AbrB like domain 
SYNPCC7002_F0031	SM00487	DEAD-like helicases superfamily
SYNPCC7002_F0031	SM00490	helicase superfamily c-terminal domain
SYNPCC7002_F0065	SM00028	Tetratricopeptide repeats
SYNPCC7002_F0065	SM00671	Sel1-like repeats.
SYNPCC7002_F0068	SM00028	Tetratricopeptide repeats
SYNPCC7002_F0072	SM00028	Tetratricopeptide repeats
SYNPCC7002_F0086	SM00490	helicase superfamily c-terminal domain
SYNPCC7002_F0092	SM00487	DEAD-like helicases superfamily
SYNPCC7002_G0002	SM00470	ParB-like nuclease domain
SYNPCC7002_G0007	SM00342	helix_turn_helix, arabinose operon control protein
SYNPCC7002_G0008	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_G0008	SM00567	E-Z type HEAT repeats
SYNPCC7002_G0012	SM00831	Cation transporter/ATPase, N-terminus
SYNPCC7002_G0014	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_G0019	SM01006	Siderophore biosynthesis protein domain
SYNPCC7002_G0022	SM01006	Siderophore biosynthesis protein domain
SYNPCC7002_G0028	SM00530	Helix-turn-helix XRE-family like proteins 
SYNPCC7002_G0035	SM00327	von Willebrand factor (vWF) type A domain
SYNPCC7002_G0039	SM00857	Resolvase, N terminal domain
SYNPCC7002_G0058	SM00028	Tetratricopeptide repeats
SYNPCC7002_G0058	SM00448	cheY-homologous receiver domain
SYNPCC7002_G0061	SM00387	Histidine kinase-like ATPases
SYNPCC7002_G0061	SM00388	His Kinase A (phosphoacceptor) domain
SYNPCC7002_G0062	SM00421	helix_turn_helix, Lux Regulon
SYNPCC7002_G0062	SM00448	cheY-homologous receiver domain
SYNPCC7002_G0064	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_G0065	SM00347	helix_turn_helix multiple antibiotic resistance protein
SYNPCC7002_G0069	SM00100	Cyclic nucleotide-monophosphate binding domain
SYNPCC7002_G0069	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_G0080	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_G0086	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_G0089	SM00698	Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases.
SYNPCC7002_G0096	SM00342	helix_turn_helix, arabinose operon control protein
SYNPCC7002_G0099	SM00342	helix_turn_helix, arabinose operon control protein
SYNPCC7002_G0100	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_G0104	SM00342	helix_turn_helix, arabinose operon control protein
SYNPCC7002_G0107	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_G0115	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_G0127	SM01004	Delta-aminolevulinic acid dehydratase
SYNPCC7002_G0141	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_G0144	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7002_G0153	SM00267	diguanylate cyclase
SYNPCC7002_G0153	SM01079	SYNPCC7002_G0153
SYNPCC7002_G0158	SM00448	cheY-homologous receiver domain
SYNPCC7002_G0158	SM00862	Transcriptional regulatory protein, C terminal
SYNPCC7002_G0159	SM00387	Histidine kinase-like ATPases
SYNPCC7002_G0159	SM00388	His Kinase A (phosphoacceptor) domain
