AWQ22_00005 SM00382 ATPases associated with a variety of cellular activities AWQ22_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain AWQ22_00050 SM01133 AWQ22_00050 AWQ22_00090 SM00382 ATPases associated with a variety of cellular activities AWQ22_00105 SM00320 WD40 repeats AWQ22_00115 SM00864 Tubulin/FtsZ family, GTPase domain AWQ22_00115 SM00865 Tubulin/FtsZ family, C-terminal domain AWQ22_00165 SM01091 Transporter associated domain AWQ22_00200 SM00382 ATPases associated with a variety of cellular activities AWQ22_00230 SM00448 cheY-homologous receiver domain AWQ22_00235 SM00448 cheY-homologous receiver domain AWQ22_00240 SM00260 Two component signalling adaptor domain AWQ22_00245 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AWQ22_00245 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AWQ22_00250 SM00073 Histidine Phosphotransfer domain AWQ22_00250 SM00260 Two component signalling adaptor domain AWQ22_00250 SM00387 Histidine kinase-like ATPases AWQ22_00250 SM00448 cheY-homologous receiver domain AWQ22_00260 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AWQ22_00270 SM00841 Elongation factor P, C-terminal AWQ22_00270 SM01185 AWQ22_00270 AWQ22_00315 SM00358 Double-stranded RNA binding motif AWQ22_00315 SM00535 Ribonuclease III family AWQ22_00345 SM00507 HNH nucleases AWQ22_00430 SM01192 AWQ22_00430 AWQ22_00430 SM01193 AWQ22_00430 AWQ22_00490 SM00822 AWQ22_00490 AWQ22_00595 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AWQ22_00660 SM00382 ATPases associated with a variety of cellular activities AWQ22_00715 SM00422 helix_turn_helix, mercury resistance AWQ22_00755 SM00448 cheY-homologous receiver domain AWQ22_00755 SM00862 Transcriptional regulatory protein, C terminal AWQ22_00765 SM00382 ATPases associated with a variety of cellular activities AWQ22_00765 SM01086 C-terminal, D2-small domain, of ClpB protein AWQ22_00800 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AWQ22_00800 SM00091 PAS domain AWQ22_00800 SM00387 Histidine kinase-like ATPases AWQ22_00800 SM00388 His Kinase A (phosphoacceptor) domain AWQ22_00800 SM00448 cheY-homologous receiver domain AWQ22_00835 SM00382 ATPases associated with a variety of cellular activities AWQ22_00900 SM00382 ATPases associated with a variety of cellular activities AWQ22_00910 SM00959 Rho termination factor, N-terminal domain AWQ22_00945 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. AWQ22_00960 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AWQ22_00960 SM00534 ATPase domain of DNA mismatch repair MUTS family AWQ22_00990 SM00028 Tetratricopeptide repeats AWQ22_01015 SM00937 AWQ22_01015 AWQ22_01030 SM00670 Large family of predicted nucleotide-binding domains AWQ22_01055 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AWQ22_01060 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AWQ22_01070 SM00116 Domain in cystathionine beta-synthase and other proteins. AWQ22_01070 SM01093 AWQ22_01070 AWQ22_01135 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AWQ22_01135 SM00245 tail specific protease AWQ22_01160 SM00448 cheY-homologous receiver domain AWQ22_01160 SM00862 Transcriptional regulatory protein, C terminal AWQ22_01175 SM01350 AWQ22_01175 AWQ22_01255 SM00173 Ras subfamily of RAS small GTPases AWQ22_01255 SM00175 Rab subfamily of small GTPases AWQ22_01255 SM00364 Leucine-rich repeats, bacterial type AWQ22_01255 SM00365 Leucine-rich repeat, SDS22-like subfamily AWQ22_01255 SM00369 Leucine-rich repeats, typical (most populated) subfamily AWQ22_01260 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AWQ22_01260 SM00465 GIY-YIG type nucleases (URI domain) AWQ22_01275 SM00382 ATPases associated with a variety of cellular activities AWQ22_01300 SM00831 Cation transporter/ATPase, N-terminus AWQ22_01305 SM01230 AWQ22_01305 AWQ22_01320 SM00465 GIY-YIG type nucleases (URI domain) AWQ22_01395 SM01240 AWQ22_01395 AWQ22_01430 SM00360 RNA recognition motif AWQ22_01435 SM00116 Domain in cystathionine beta-synthase and other proteins. AWQ22_01435 SM00924 MgtE intracellular N domain AWQ22_01440 SM00320 WD40 repeats AWQ22_01510 SM01248 AWQ22_01510 AWQ22_01515 SM01247 AWQ22_01515 AWQ22_01545 SM00387 Histidine kinase-like ATPases AWQ22_01545 SM00388 His Kinase A (phosphoacceptor) domain AWQ22_01545 SM00448 cheY-homologous receiver domain AWQ22_01605 SM00905 Dihydroneopterin aldolase AWQ22_01615 SM00729 Elongator protein 3, MiaB family, Radical SAM AWQ22_01615 SM00876 Biotin and Thiamin Synthesis associated domain AWQ22_01700 SM00729 Elongator protein 3, MiaB family, Radical SAM AWQ22_01730 SM00530 Helix-turn-helix XRE-family like proteins AWQ22_01775 SM00838 Elongation factor G C-terminus AWQ22_01775 SM00889 Elongation factor G, domain IV AWQ22_01805 SM00116 Domain in cystathionine beta-synthase and other proteins. AWQ22_01810 SM00567 E-Z type HEAT repeats AWQ22_01815 SM00382 ATPases associated with a variety of cellular activities AWQ22_01835 SM01011 Aminopeptidase P, N-terminal domain AWQ22_01845 SM00271 DnaJ molecular chaperone homology domain AWQ22_01875 SM00382 ATPases associated with a variety of cellular activities AWQ22_01900 SM00450 Rhodanese Homology Domain AWQ22_01910 SM00487 DEAD-like helicases superfamily AWQ22_01910 SM00490 helicase superfamily c-terminal domain AWQ22_01940 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AWQ22_01940 SM00331 Sigma factor PP2C-like phosphatases AWQ22_01980 SM00100 Cyclic nucleotide-monophosphate binding domain AWQ22_02005 SM00535 Ribonuclease III family AWQ22_02010 SM00967 RNA 2'-O ribose methyltransferase substrate binding AWQ22_02060 SM00382 ATPases associated with a variety of cellular activities AWQ22_02155 SM00858 AWQ22_02155 AWQ22_02180 SM00984 UDP binding domain AWQ22_02205 SM00028 Tetratricopeptide repeats AWQ22_02210 SM00382 ATPases associated with a variety of cellular activities AWQ22_02220 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AWQ22_02220 SM00387 Histidine kinase-like ATPases AWQ22_02220 SM00388 His Kinase A (phosphoacceptor) domain AWQ22_02235 SM00382 ATPases associated with a variety of cellular activities AWQ22_02235 SM01086 C-terminal, D2-small domain, of ClpB protein AWQ22_02255 SM00567 E-Z type HEAT repeats AWQ22_02265 SM00116 Domain in cystathionine beta-synthase and other proteins. AWQ22_02285 SM00388 His Kinase A (phosphoacceptor) domain AWQ22_02305 SM00220 Serine/Threonine protein kinases, catalytic domain AWQ22_02310 SM00873 B3/4 domain AWQ22_02310 SM00874 tRNA synthetase B5 domain AWQ22_02310 SM00896 Ferredoxin-fold anticodon binding domain AWQ22_02315 SM00919 Malic enzyme, NAD binding domain AWQ22_02315 SM01274 AWQ22_02315 AWQ22_02340 SM00331 Sigma factor PP2C-like phosphatases AWQ22_02340 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AWQ22_02370 SM00220 Serine/Threonine protein kinases, catalytic domain AWQ22_02415 SM00460 Transglutaminase/protease-like homologues AWQ22_02450 SM00240 Forkhead associated domain AWQ22_02455 SM00363 S4 RNA-binding domain AWQ22_02475 SM00327 von Willebrand factor (vWF) type A domain AWQ22_02510 SM00448 cheY-homologous receiver domain AWQ22_02510 SM00862 Transcriptional regulatory protein, C terminal AWQ22_02560 SM00448 cheY-homologous receiver domain AWQ22_02560 SM00862 Transcriptional regulatory protein, C terminal AWQ22_02565 SM00382 ATPases associated with a variety of cellular activities AWQ22_02605 SM01321 AWQ22_02605 AWQ22_02635 SM00849 Metallo-beta-lactamase superfamily AWQ22_02700 SM00014 Acid phosphatase homologues AWQ22_02790 SM00271 DnaJ molecular chaperone homology domain AWQ22_02825 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AWQ22_02835 SM00481 DNA polymerase alpha chain like domain AWQ22_02860 SM01007 Class II Aldolase and Adducin N-terminal domain AWQ22_02910 SM00116 Domain in cystathionine beta-synthase and other proteins. AWQ22_02915 SM00756 AWQ22_02915 AWQ22_02920 SM00852 Probable molybdopterin binding domain AWQ22_02925 SM00903 Flavin reductase like domain AWQ22_02935 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. AWQ22_02965 SM00955 AWQ22_02965 AWQ22_02985 SM00646 AWQ22_02985 AWQ22_03015 SM00287 Bacterial SH3 domain homologues AWQ22_03015 SM00646 AWQ22_03015 AWQ22_03035 SM00226 Low molecular weight phosphatase family AWQ22_03045 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AWQ22_03055 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AWQ22_03075 SM00327 von Willebrand factor (vWF) type A domain AWQ22_03075 SM00382 ATPases associated with a variety of cellular activities AWQ22_03090 SM00836 DALR anticodon binding domain AWQ22_03090 SM01016 Arginyl tRNA synthetase N terminal dom AWQ22_03135 SM00421 helix_turn_helix, Lux Regulon AWQ22_03135 SM00448 cheY-homologous receiver domain AWQ22_03145 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AWQ22_03160 SM00487 DEAD-like helicases superfamily AWQ22_03160 SM00490 helicase superfamily c-terminal domain AWQ22_03170 SM00448 cheY-homologous receiver domain AWQ22_03185 SM00487 DEAD-like helicases superfamily AWQ22_03185 SM00490 helicase superfamily c-terminal domain AWQ22_03190 SM00729 Elongator protein 3, MiaB family, Radical SAM AWQ22_03205 SM00028 Tetratricopeptide repeats AWQ22_03205 SM00271 DnaJ molecular chaperone homology domain AWQ22_03225 SM00382 ATPases associated with a variety of cellular activities AWQ22_03235 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AWQ22_03285 SM00421 helix_turn_helix, Lux Regulon AWQ22_03320 SM00853 MutL C terminal dimerisation domain AWQ22_03320 SM01340 AWQ22_03320 AWQ22_03350 SM00861 Transketolase, pyrimidine binding domain AWQ22_03370 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AWQ22_03370 SM00421 helix_turn_helix, Lux Regulon AWQ22_03375 SM00507 HNH nucleases AWQ22_03400 SM00729 Elongator protein 3, MiaB family, Radical SAM AWQ22_03525 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AWQ22_03525 SM00387 Histidine kinase-like ATPases AWQ22_03525 SM00388 His Kinase A (phosphoacceptor) domain AWQ22_03525 SM00448 cheY-homologous receiver domain AWQ22_03545 SM00271 DnaJ molecular chaperone homology domain AWQ22_03560 SM00382 ATPases associated with a variety of cellular activities AWQ22_03565 SM00382 ATPases associated with a variety of cellular activities AWQ22_03600 SM00382 ATPases associated with a variety of cellular activities AWQ22_03615 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AWQ22_03640 SM00382 ATPases associated with a variety of cellular activities AWQ22_03645 SM00382 ATPases associated with a variety of cellular activities AWQ22_03680 SM00988 UreE urease accessory protein, N-terminal domain AWQ22_03685 SM00460 Transglutaminase/protease-like homologues AWQ22_03725 SM00917 LeuA allosteric (dimerisation) domain AWQ22_03830 SM00382 ATPases associated with a variety of cellular activities AWQ22_03850 SM00322 K homology RNA-binding domain AWQ22_03865 SM01133 AWQ22_03865 AWQ22_03910 SM00382 ATPases associated with a variety of cellular activities AWQ22_03935 SM00382 ATPases associated with a variety of cellular activities AWQ22_03945 SM00852 Probable molybdopterin binding domain AWQ22_03955 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AWQ22_04010 SM00729 Elongator protein 3, MiaB family, Radical SAM AWQ22_04025 SM00316 Ribosomal protein S1-like RNA-binding domain AWQ22_04040 SM00345 helix_turn_helix gluconate operon transcriptional repressor AWQ22_04070 SM00930 AWQ22_04070 AWQ22_04085 SM00382 ATPases associated with a variety of cellular activities AWQ22_04125 SM00028 Tetratricopeptide repeats AWQ22_04160 SM00562 AWQ22_04160 AWQ22_04185 SM00670 Large family of predicted nucleotide-binding domains AWQ22_04195 SM00382 ATPases associated with a variety of cellular activities AWQ22_04220 SM00434 DNA Topoisomerase IV AWQ22_04265 SM00388 His Kinase A (phosphoacceptor) domain AWQ22_04300 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AWQ22_04300 SM00245 tail specific protease AWQ22_04350 SM00448 cheY-homologous receiver domain AWQ22_04350 SM00862 Transcriptional regulatory protein, C terminal AWQ22_04355 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AWQ22_04360 SM01094 CpcD/allophycocyanin linker domain AWQ22_04385 SM00342 helix_turn_helix, arabinose operon control protein AWQ22_04385 SM00448 cheY-homologous receiver domain AWQ22_04400 SM00382 ATPases associated with a variety of cellular activities AWQ22_04405 SM01116 AWQ22_04405 AWQ22_04415 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AWQ22_04415 SM00091 PAS domain AWQ22_04415 SM00387 Histidine kinase-like ATPases AWQ22_04415 SM00388 His Kinase A (phosphoacceptor) domain AWQ22_04425 SM00387 Histidine kinase-like ATPases AWQ22_04425 SM00388 His Kinase A (phosphoacceptor) domain AWQ22_04425 SM00448 cheY-homologous receiver domain AWQ22_04430 SM00829 Enoylreductase AWQ22_04440 SM00220 Serine/Threonine protein kinases, catalytic domain AWQ22_04455 SM00220 Serine/Threonine protein kinases, catalytic domain AWQ22_04460 SM00382 ATPases associated with a variety of cellular activities AWQ22_04515 SM00788 Adenylosuccinate synthetase AWQ22_04530 SM00642 Alpha-amylase domain AWQ22_04555 SM00881 CoA binding domain AWQ22_04575 SM00729 Elongator protein 3, MiaB family, Radical SAM AWQ22_04590 SM00650 Ribosomal RNA adenine dimethylases AWQ22_04605 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AWQ22_04605 SM00387 Histidine kinase-like ATPases AWQ22_04605 SM00388 His Kinase A (phosphoacceptor) domain AWQ22_04605 SM00448 cheY-homologous receiver domain AWQ22_04615 SM00382 ATPases associated with a variety of cellular activities AWQ22_04630 SM01001 AIR carboxylase AWQ22_04635 SM00331 Sigma factor PP2C-like phosphatases AWQ22_04635 SM00448 cheY-homologous receiver domain AWQ22_04640 SM00450 Rhodanese Homology Domain AWQ22_04650 SM01118 AWQ22_04650 AWQ22_04655 SM00382 ATPases associated with a variety of cellular activities AWQ22_04705 SM01248 AWQ22_04705 AWQ22_04740 SM00240 Forkhead associated domain AWQ22_04790 SM00448 cheY-homologous receiver domain AWQ22_04790 SM00862 Transcriptional regulatory protein, C terminal AWQ22_04800 SM00052 Putative diguanylate phosphodiesterase AWQ22_04800 SM00267 diguanylate cyclase AWQ22_04800 SM00448 cheY-homologous receiver domain AWQ22_04835 SM00732 Likely ribonuclease with RNase H fold. AWQ22_04880 SM00316 Ribosomal protein S1-like RNA-binding domain AWQ22_04895 SM00363 S4 RNA-binding domain AWQ22_04980 SM00226 Low molecular weight phosphatase family AWQ22_04985 SM00198 SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extracellular domains. AWQ22_05000 SM00028 Tetratricopeptide repeats AWQ22_05005 SM00382 ATPases associated with a variety of cellular activities AWQ22_05010 SM00448 cheY-homologous receiver domain AWQ22_05010 SM00862 Transcriptional regulatory protein, C terminal AWQ22_05040 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AWQ22_05040 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AWQ22_05070 SM00393 Putative single-stranded nucleic acids-binding domain AWQ22_05080 SM00382 ATPases associated with a variety of cellular activities AWQ22_05085 SM00287 Bacterial SH3 domain homologues AWQ22_05090 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AWQ22_05090 SM00091 PAS domain AWQ22_05090 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AWQ22_05090 SM00387 Histidine kinase-like ATPases AWQ22_05090 SM00388 His Kinase A (phosphoacceptor) domain AWQ22_05090 SM00448 cheY-homologous receiver domain AWQ22_05095 SM00073 Histidine Phosphotransfer domain AWQ22_05125 SM00825 Beta-ketoacyl synthase AWQ22_05140 SM00487 DEAD-like helicases superfamily AWQ22_05140 SM00490 helicase superfamily c-terminal domain AWQ22_05165 SM01207 AWQ22_05165 AWQ22_05185 SM00909 Sporulation and spore germination AWQ22_05190 SM00240 Forkhead associated domain AWQ22_05235 SM00861 Transketolase, pyrimidine binding domain AWQ22_05240 SM00825 Beta-ketoacyl synthase AWQ22_05270 SM00649 Ribosomal protein L11/L12 AWQ22_05275 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AWQ22_05275 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AWQ22_05305 SM00937 AWQ22_05305 AWQ22_05335 SM00662 RNA polymerases D AWQ22_05350 SM00316 Ribosomal protein S1-like RNA-binding domain AWQ22_05395 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AWQ22_05400 SM01374 AWQ22_05400 AWQ22_05420 SM00322 K homology RNA-binding domain AWQ22_05435 SM01382 AWQ22_05435 AWQ22_05435 SM01383 AWQ22_05435 AWQ22_05455 SM00316 Ribosomal protein S1-like RNA-binding domain AWQ22_05455 SM00322 K homology RNA-binding domain AWQ22_05485 SM00507 HNH nucleases AWQ22_05495 SM00382 ATPases associated with a variety of cellular activities AWQ22_05525 SM00100 Cyclic nucleotide-monophosphate binding domain AWQ22_05555 SM00603 AWQ22_05555 AWQ22_05620 SM01057 Eukaryotic-type carbonic anhydrase AWQ22_05655 SM00563 Phosphate acyltransferases AWQ22_05660 SM00073 Histidine Phosphotransfer domain AWQ22_05675 SM00967 RNA 2'-O ribose methyltransferase substrate binding AWQ22_05690 SM00448 cheY-homologous receiver domain AWQ22_05695 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AWQ22_05695 SM00387 Histidine kinase-like ATPases AWQ22_05695 SM00388 His Kinase A (phosphoacceptor) domain AWQ22_05705 SM01228 AWQ22_05705 AWQ22_05735 SM00968 SMC proteins Flexible Hinge Domain AWQ22_05755 SM01034 Sensors of blue-light using FAD AWQ22_05770 SM00240 Forkhead associated domain AWQ22_05880 SM00855 Phosphoglycerate mutase family AWQ22_05980 SM00861 Transketolase, pyrimidine binding domain AWQ22_05985 SM00822 AWQ22_05985 AWQ22_05985 SM00823 Phosphopantetheine attachment site AWQ22_05985 SM00825 Beta-ketoacyl synthase AWQ22_05985 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AWQ22_05985 SM01294 AWQ22_05985 AWQ22_05995 SM01234 AWQ22_05995 AWQ22_06000 SM00382 ATPases associated with a variety of cellular activities AWQ22_06025 SM00382 ATPases associated with a variety of cellular activities AWQ22_06035 SM00897 FIST N domain AWQ22_06035 SM01204 AWQ22_06035 AWQ22_06180 SM01091 Transporter associated domain AWQ22_06255 SM00448 cheY-homologous receiver domain AWQ22_06270 SM00382 ATPases associated with a variety of cellular activities AWQ22_06300 SM00419 helix_turn_helix, cAMP Regulatory protein AWQ22_06330 SM00450 Rhodanese Homology Domain AWQ22_06425 SM00872 Alpha mannosidase, middle domain AWQ22_06460 SM00957 SecA DEAD-like domain AWQ22_06460 SM00958 SecA preprotein cross-linking domain AWQ22_06470 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AWQ22_06470 SM00091 PAS domain AWQ22_06470 SM00387 Histidine kinase-like ATPases AWQ22_06470 SM00388 His Kinase A (phosphoacceptor) domain AWQ22_06470 SM00448 cheY-homologous receiver domain AWQ22_06480 SM00480 DNA polymerase III beta subunit AWQ22_06485 SM01093 AWQ22_06485 AWQ22_06505 SM00360 RNA recognition motif AWQ22_06515 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AWQ22_06530 SM00849 Metallo-beta-lactamase superfamily AWQ22_06535 SM01130 AWQ22_06535 AWQ22_06540 SM00859 Semialdehyde dehydrogenase, NAD binding domain AWQ22_06565 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AWQ22_06565 SM00474 3'-5' exonuclease AWQ22_06565 SM00475 5'-3' exonuclease AWQ22_06565 SM00482 DNA polymerase A domain AWQ22_06590 SM00938 Nitrogen regulatory protein P-II AWQ22_06600 SM00487 DEAD-like helicases superfamily AWQ22_06600 SM00490 helicase superfamily c-terminal domain AWQ22_06600 SM00982 AWQ22_06600 AWQ22_06600 SM01058 CarD-like/TRCF domain AWQ22_06700 SM00448 cheY-homologous receiver domain AWQ22_06700 SM00862 Transcriptional regulatory protein, C terminal AWQ22_06705 SM00305 Hint (Hedgehog/Intein) domain C-terminal region AWQ22_06705 SM00507 HNH nucleases AWQ22_06730 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AWQ22_06770 SM00849 Metallo-beta-lactamase superfamily AWQ22_06770 SM00903 Flavin reductase like domain AWQ22_06790 SM00116 Domain in cystathionine beta-synthase and other proteins. AWQ22_06830 SM00382 ATPases associated with a variety of cellular activities AWQ22_06910 SM00387 Histidine kinase-like ATPases AWQ22_06910 SM00433 TopoisomeraseII AWQ22_06920 SM00400 zinc finger AWQ22_06920 SM00493 AWQ22_06920 AWQ22_06940 SM00729 Elongator protein 3, MiaB family, Radical SAM AWQ22_06965 SM00387 Histidine kinase-like ATPases AWQ22_06965 SM00388 His Kinase A (phosphoacceptor) domain AWQ22_06965 SM00448 cheY-homologous receiver domain AWQ22_06970 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AWQ22_06970 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AWQ22_06970 SM00091 PAS domain AWQ22_06970 SM00267 diguanylate cyclase AWQ22_06975 SM00917 LeuA allosteric (dimerisation) domain AWQ22_07000 SM00729 Elongator protein 3, MiaB family, Radical SAM AWQ22_07010 SM00387 Histidine kinase-like ATPases AWQ22_07010 SM00388 His Kinase A (phosphoacceptor) domain AWQ22_07055 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AWQ22_07055 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AWQ22_07060 SM00260 Two component signalling adaptor domain AWQ22_07065 SM00448 cheY-homologous receiver domain AWQ22_07070 SM00448 cheY-homologous receiver domain AWQ22_07105 SM00091 PAS domain AWQ22_07105 SM00387 Histidine kinase-like ATPases AWQ22_07105 SM00388 His Kinase A (phosphoacceptor) domain AWQ22_07105 SM00448 cheY-homologous receiver domain AWQ22_07115 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AWQ22_07115 SM00387 Histidine kinase-like ATPases AWQ22_07115 SM00388 His Kinase A (phosphoacceptor) domain AWQ22_07135 SM00248 ankyrin repeats AWQ22_07145 SM00382 ATPases associated with a variety of cellular activities AWQ22_07210 SM00232 JAB/MPN domain AWQ22_07220 SM00091 PAS domain AWQ22_07220 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AWQ22_07220 SM00387 Histidine kinase-like ATPases AWQ22_07220 SM00388 His Kinase A (phosphoacceptor) domain AWQ22_07225 SM01209 AWQ22_07225 AWQ22_07225 SM01210 AWQ22_07225 AWQ22_07235 SM00306 Hint (Hedgehog/Intein) domain N-terminal region AWQ22_07235 SM00481 DNA polymerase alpha chain like domain AWQ22_07255 SM00567 E-Z type HEAT repeats AWQ22_07280 SM00729 Elongator protein 3, MiaB family, Radical SAM AWQ22_07305 SM00886 Stress responsive A/B Barrel Domain AWQ22_07370 SM00933 AWQ22_07370 AWQ22_07380 SM00382 ATPases associated with a variety of cellular activities AWQ22_07400 SM00567 E-Z type HEAT repeats AWQ22_07415 SM00890 Domain of unknown function AWQ22_07445 SM00382 ATPases associated with a variety of cellular activities AWQ22_07460 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AWQ22_07460 SM00387 Histidine kinase-like ATPases AWQ22_07460 SM00388 His Kinase A (phosphoacceptor) domain AWQ22_07465 SM00448 cheY-homologous receiver domain AWQ22_07465 SM00862 Transcriptional regulatory protein, C terminal AWQ22_07490 SM00419 helix_turn_helix, cAMP Regulatory protein AWQ22_07545 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. AWQ22_07560 SM00854 Bacterial capsule synthesis protein PGA_cap AWQ22_07615 SM00382 ATPases associated with a variety of cellular activities AWQ22_07685 SM00450 Rhodanese Homology Domain AWQ22_07700 SM00116 Domain in cystathionine beta-synthase and other proteins. AWQ22_07700 SM00267 diguanylate cyclase AWQ22_07740 SM00382 ATPases associated with a variety of cellular activities AWQ22_07905 SM00382 ATPases associated with a variety of cellular activities AWQ22_07905 SM00994 ClpX C4-type zinc finger AWQ22_07905 SM01086 C-terminal, D2-small domain, of ClpB protein AWQ22_07950 SM00316 Ribosomal protein S1-like RNA-binding domain AWQ22_07950 SM00357 Cold shock protein domain AWQ22_07950 SM00955 AWQ22_07950 AWQ22_07960 SM01211 AWQ22_07960 AWQ22_07975 SM00387 Histidine kinase-like ATPases AWQ22_07975 SM00388 His Kinase A (phosphoacceptor) domain AWQ22_07975 SM00448 cheY-homologous receiver domain AWQ22_08015 SM00220 Serine/Threonine protein kinases, catalytic domain AWQ22_08065 SM00028 Tetratricopeptide repeats AWQ22_08100 SM00507 HNH nucleases AWQ22_08120 SM00448 cheY-homologous receiver domain AWQ22_08125 SM00729 Elongator protein 3, MiaB family, Radical SAM AWQ22_08185 SM00849 Metallo-beta-lactamase superfamily AWQ22_08270 SM01321 AWQ22_08270 AWQ22_08340 SM00567 E-Z type HEAT repeats AWQ22_08355 SM00382 ATPases associated with a variety of cellular activities AWQ22_08355 SM00962 SRP54-type protein, GTPase domain AWQ22_08355 SM00963 SRP54-type protein, helical bundle domain AWQ22_08380 SM00382 ATPases associated with a variety of cellular activities AWQ22_08390 SM00360 RNA recognition motif AWQ22_08395 SM01230 AWQ22_08395 AWQ22_08435 SM00260 Two component signalling adaptor domain AWQ22_08435 SM00387 Histidine kinase-like ATPases AWQ22_08435 SM00448 cheY-homologous receiver domain AWQ22_08435 SM01231 AWQ22_08435 AWQ22_08445 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AWQ22_08445 SM00387 Histidine kinase-like ATPases AWQ22_08445 SM00388 His Kinase A (phosphoacceptor) domain AWQ22_08465 SM00899 AWQ22_08465 AWQ22_08525 SM00382 ATPases associated with a variety of cellular activities AWQ22_08555 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AWQ22_08570 SM00831 Cation transporter/ATPase, N-terminus AWQ22_08610 SM00220 Serine/Threonine protein kinases, catalytic domain AWQ22_08660 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AWQ22_08665 SM00732 Likely ribonuclease with RNase H fold. AWQ22_08675 SM00100 Cyclic nucleotide-monophosphate binding domain AWQ22_08675 SM00419 helix_turn_helix, cAMP Regulatory protein AWQ22_08700 SM00981 AWQ22_08700 AWQ22_08705 SM00220 Serine/Threonine protein kinases, catalytic domain AWQ22_08765 SM00798 AICARFT/IMPCHase bienzyme AWQ22_08765 SM00851 MGS-like domain AWQ22_08815 SM00382 ATPases associated with a variety of cellular activities AWQ22_08820 SM00028 Tetratricopeptide repeats AWQ22_08830 SM00487 DEAD-like helicases superfamily AWQ22_08830 SM00490 helicase superfamily c-terminal domain AWQ22_08905 SM00382 ATPases associated with a variety of cellular activities AWQ22_08940 SM00220 Serine/Threonine protein kinases, catalytic domain AWQ22_08940 SM00320 WD40 repeats AWQ22_08975 SM00382 ATPases associated with a variety of cellular activities AWQ22_08985 SM00028 Tetratricopeptide repeats AWQ22_08995 SM00271 DnaJ molecular chaperone homology domain AWQ22_09020 SM00849 Metallo-beta-lactamase superfamily AWQ22_09020 SM00903 Flavin reductase like domain AWQ22_09025 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AWQ22_09025 SM00493 AWQ22_09025 AWQ22_09055 SM00382 ATPases associated with a variety of cellular activities AWQ22_09065 SM00603 AWQ22_09065 AWQ22_09070 SM01004 Delta-aminolevulinic acid dehydratase AWQ22_09205 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AWQ22_09235 SM00331 Sigma factor PP2C-like phosphatases AWQ22_09235 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AWQ22_09240 SM00100 Cyclic nucleotide-monophosphate binding domain AWQ22_09240 SM00419 helix_turn_helix, cAMP Regulatory protein AWQ22_09265 SM00930 AWQ22_09265 AWQ22_09270 SM00961 Ribulose bisphosphate carboxylase, small chain AWQ22_09290 SM00961 Ribulose bisphosphate carboxylase, small chain AWQ22_09300 SM00877 AWQ22_09300 AWQ22_09305 SM00877 AWQ22_09305 AWQ22_09355 SM00382 ATPases associated with a variety of cellular activities AWQ22_09370 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AWQ22_09370 SM01232 AWQ22_09370 AWQ22_09410 SM01387 AWQ22_09410 AWQ22_09515 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AWQ22_09515 SM00245 tail specific protease AWQ22_09525 SM00072 Guanylate kinase homologues. AWQ22_09575 SM00487 DEAD-like helicases superfamily AWQ22_09575 SM00490 helicase superfamily c-terminal domain AWQ22_09590 SM00052 Putative diguanylate phosphodiesterase AWQ22_09590 SM00267 diguanylate cyclase AWQ22_09600 SM00100 Cyclic nucleotide-monophosphate binding domain AWQ22_09605 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AWQ22_09615 SM00849 Metallo-beta-lactamase superfamily AWQ22_09620 SM00642 Alpha-amylase domain AWQ22_09665 SM00382 ATPases associated with a variety of cellular activities AWQ22_09670 SM00240 Forkhead associated domain AWQ22_09680 SM00155 Phospholipase D. Active site motifs. AWQ22_09680 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AWQ22_09685 SM00028 Tetratricopeptide repeats AWQ22_09690 SM00341 Helicase and RNase D C-terminal AWQ22_09690 SM00487 DEAD-like helicases superfamily AWQ22_09690 SM00490 helicase superfamily c-terminal domain AWQ22_09690 SM00956 AWQ22_09690 AWQ22_09700 SM00387 Histidine kinase-like ATPases AWQ22_09720 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain AWQ22_09720 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AWQ22_09720 SM00240 Forkhead associated domain AWQ22_09745 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AWQ22_09760 SM00729 Elongator protein 3, MiaB family, Radical SAM AWQ22_09810 SM00271 DnaJ molecular chaperone homology domain AWQ22_09815 SM00240 Forkhead associated domain AWQ22_09820 SM01094 CpcD/allophycocyanin linker domain AWQ22_09860 SM00448 cheY-homologous receiver domain AWQ22_09865 SM00434 DNA Topoisomerase IV AWQ22_09940 SM00387 Histidine kinase-like ATPases AWQ22_09955 SM00421 helix_turn_helix, Lux Regulon AWQ22_09955 SM00448 cheY-homologous receiver domain AWQ22_09995 SM00411 bacterial (prokaryotic) histone like domain AWQ22_10055 SM00822 AWQ22_10055 AWQ22_10060 SM00823 Phosphopantetheine attachment site AWQ22_10060 SM01294 AWQ22_10060 AWQ22_10110 SM00729 Elongator protein 3, MiaB family, Radical SAM AWQ22_10135 SM00382 ATPases associated with a variety of cellular activities AWQ22_10140 SM00382 ATPases associated with a variety of cellular activities AWQ22_10145 SM00947 Carbonic anhydrase AWQ22_10170 SM00450 Rhodanese Homology Domain AWQ22_10230 SM00881 CoA binding domain AWQ22_10265 SM00642 Alpha-amylase domain AWQ22_10280 SM00877 AWQ22_10280 AWQ22_10315 SM00421 helix_turn_helix, Lux Regulon AWQ22_10315 SM00448 cheY-homologous receiver domain AWQ22_10345 SM00382 ATPases associated with a variety of cellular activities AWQ22_10370 SM00663 RNA polymerase I subunit A N-terminus AWQ22_10415 SM00474 3'-5' exonuclease AWQ22_10440 SM00464 Found in ATP-dependent protease La (LON) AWQ22_10445 SM01403 AWQ22_10445 AWQ22_10455 SM00838 Elongation factor G C-terminus AWQ22_10455 SM00889 Elongation factor G, domain IV AWQ22_10490 SM00996 S-adenosyl-L-homocysteine hydrolase AWQ22_10490 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AWQ22_10510 SM00046 Diacylglycerol kinase catalytic domain (presumed) AWQ22_10535 SM00028 Tetratricopeptide repeats AWQ22_10540 SM00838 Elongation factor G C-terminus AWQ22_10540 SM00889 Elongation factor G, domain IV AWQ22_10560 SM00363 S4 RNA-binding domain AWQ22_10560 SM01390 AWQ22_10560 AWQ22_10645 SM00091 PAS domain AWQ22_10645 SM00387 Histidine kinase-like ATPases AWQ22_10645 SM00388 His Kinase A (phosphoacceptor) domain AWQ22_10655 SM00859 Semialdehyde dehydrogenase, NAD binding domain AWQ22_10670 SM00382 ATPases associated with a variety of cellular activities AWQ22_10675 SM00831 Cation transporter/ATPase, N-terminus AWQ22_10700 SM00460 Transglutaminase/protease-like homologues AWQ22_10740 SM00878 Biotin carboxylase C-terminal domain AWQ22_10885 SM00028 Tetratricopeptide repeats AWQ22_10895 SM00271 DnaJ molecular chaperone homology domain AWQ22_10925 SM00052 Putative diguanylate phosphodiesterase AWQ22_10960 SM00028 Tetratricopeptide repeats AWQ22_10975 SM00062 Bacterial periplasmic substrate-binding proteins AWQ22_11020 SM00382 ATPases associated with a variety of cellular activities AWQ22_11025 SM00829 Enoylreductase AWQ22_11125 SM01094 CpcD/allophycocyanin linker domain AWQ22_11130 SM01094 CpcD/allophycocyanin linker domain AWQ22_11135 SM00567 E-Z type HEAT repeats AWQ22_11175 SM00382 ATPases associated with a variety of cellular activities AWQ22_11220 SM00382 ATPases associated with a variety of cellular activities AWQ22_11245 SM00235 Zinc-dependent metalloprotease AWQ22_11310 SM00670 Large family of predicted nucleotide-binding domains AWQ22_11350 SM00487 DEAD-like helicases superfamily AWQ22_11350 SM00490 helicase superfamily c-terminal domain AWQ22_11350 SM01142 AWQ22_11350 AWQ22_11370 SM00487 DEAD-like helicases superfamily AWQ22_11370 SM00490 helicase superfamily c-terminal domain AWQ22_11375 SM00382 ATPases associated with a variety of cellular activities AWQ22_11400 SM00857 Resolvase, N terminal domain AWQ22_11440 SM00382 ATPases associated with a variety of cellular activities AWQ22_11445 SM00387 Histidine kinase-like ATPases AWQ22_11445 SM00388 His Kinase A (phosphoacceptor) domain AWQ22_11595 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AWQ22_11755 SM00984 UDP binding domain AWQ22_11810 SM00880 AWQ22_11810 AWQ22_11825 SM00382 ATPases associated with a variety of cellular activities AWQ22_11825 SM01086 C-terminal, D2-small domain, of ClpB protein AWQ22_11830 SM01329 AWQ22_11830 AWQ22_11850 SM00363 S4 RNA-binding domain AWQ22_11880 SM00316 Ribosomal protein S1-like RNA-binding domain AWQ22_11885 SM00052 Putative diguanylate phosphodiesterase AWQ22_11885 SM00267 diguanylate cyclase AWQ22_11885 SM00448 cheY-homologous receiver domain AWQ22_11890 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AWQ22_11890 SM00387 Histidine kinase-like ATPases AWQ22_11890 SM00388 His Kinase A (phosphoacceptor) domain AWQ22_11900 SM00822 AWQ22_11900 AWQ22_11915 SM00925 MltA specific insert domain AWQ22_12010 SM00877 AWQ22_12010 AWQ22_12045 SM00563 Phosphate acyltransferases AWQ22_12050 SM00849 Metallo-beta-lactamase superfamily AWQ22_12055 SM00904 Riboflavin kinase AWQ22_12110 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AWQ22_12175 SM00838 Elongation factor G C-terminus AWQ22_12200 SM00028 Tetratricopeptide repeats AWQ22_12330 SM00729 Elongator protein 3, MiaB family, Radical SAM AWQ22_12345 SM00478 endonuclease III AWQ22_12345 SM00525 AWQ22_12345 AWQ22_12365 SM00883 Chaperonin 10 Kd subunit AWQ22_12375 SM00028 Tetratricopeptide repeats AWQ22_12395 SM00052 Putative diguanylate phosphodiesterase AWQ22_12395 SM00062 Bacterial periplasmic substrate-binding proteins AWQ22_12395 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AWQ22_12395 SM00091 PAS domain AWQ22_12395 SM00267 diguanylate cyclase AWQ22_12425 SM01018 B12 binding domain AWQ22_12450 SM00028 Tetratricopeptide repeats AWQ22_12480 SM00267 diguanylate cyclase AWQ22_12525 SM00851 MGS-like domain AWQ22_12525 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AWQ22_12530 SM01005 Alanine racemase, C-terminal domain AWQ22_12535 SM00460 Transglutaminase/protease-like homologues AWQ22_12540 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AWQ22_12585 SM00382 ATPases associated with a variety of cellular activities AWQ22_12605 SM00448 cheY-homologous receiver domain AWQ22_12610 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AWQ22_12610 SM00091 PAS domain AWQ22_12610 SM00387 Histidine kinase-like ATPases AWQ22_12610 SM00388 His Kinase A (phosphoacceptor) domain AWQ22_12615 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AWQ22_12665 SM00271 DnaJ molecular chaperone homology domain AWQ22_12710 SM00421 helix_turn_helix, Lux Regulon AWQ22_12710 SM00448 cheY-homologous receiver domain AWQ22_12720 SM00852 Probable molybdopterin binding domain AWQ22_12765 SM00448 cheY-homologous receiver domain AWQ22_12775 SM00845 GatB domain AWQ22_12810 SM00358 Double-stranded RNA binding motif AWQ22_12810 SM00535 Ribonuclease III family AWQ22_12830 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AWQ22_12830 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AWQ22_12830 SM00493 AWQ22_12830 AWQ22_12875 SM00028 Tetratricopeptide repeats AWQ22_12880 SM00382 ATPases associated with a variety of cellular activities AWQ22_12905 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AWQ22_12910 SM00855 Phosphoglycerate mutase family AWQ22_12920 SM00028 Tetratricopeptide repeats AWQ22_12930 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AWQ22_12965 SM00382 ATPases associated with a variety of cellular activities AWQ22_12965 SM00393 Putative single-stranded nucleic acids-binding domain AWQ22_12970 SM01359 AWQ22_12970 AWQ22_12970 SM01360 AWQ22_12970 AWQ22_12985 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AWQ22_12985 SM00387 Histidine kinase-like ATPases AWQ22_12985 SM00388 His Kinase A (phosphoacceptor) domain AWQ22_13025 SM00463 Small MutS-related domain AWQ22_13025 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AWQ22_13025 SM00534 ATPase domain of DNA mismatch repair MUTS family AWQ22_13045 SM00331 Sigma factor PP2C-like phosphatases AWQ22_13045 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AWQ22_13055 SM00052 Putative diguanylate phosphodiesterase AWQ22_13055 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AWQ22_13055 SM00091 PAS domain AWQ22_13055 SM00267 diguanylate cyclase AWQ22_13065 SM01007 Class II Aldolase and Adducin N-terminal domain AWQ22_13080 SM00271 DnaJ molecular chaperone homology domain AWQ22_13110 SM00073 Histidine Phosphotransfer domain AWQ22_13110 SM00260 Two component signalling adaptor domain AWQ22_13110 SM00387 Histidine kinase-like ATPases AWQ22_13110 SM00448 cheY-homologous receiver domain AWQ22_13115 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AWQ22_13115 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AWQ22_13125 SM00448 cheY-homologous receiver domain AWQ22_13130 SM00448 cheY-homologous receiver domain AWQ22_13150 SM00244 prohibitin homologues AWQ22_13190 SM00877 AWQ22_13190 AWQ22_13195 SM00877 AWQ22_13195 AWQ22_13240 SM00855 Phosphoglycerate mutase family AWQ22_13260 SM00028 Tetratricopeptide repeats AWQ22_13345 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AWQ22_13355 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AWQ22_13355 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AWQ22_13355 SM00091 PAS domain AWQ22_13355 SM00387 Histidine kinase-like ATPases AWQ22_13355 SM00388 His Kinase A (phosphoacceptor) domain AWQ22_13365 SM00028 Tetratricopeptide repeats AWQ22_13370 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AWQ22_13370 SM00292 breast cancer carboxy-terminal domain AWQ22_13370 SM00532 Ligase N family AWQ22_13395 SM00998 Adenylosuccinate lyase C-terminus AWQ22_13400 SM00052 Putative diguanylate phosphodiesterase AWQ22_13405 SM00833 Cobalamin synthesis protein cobW C-terminal domain AWQ22_13420 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AWQ22_13465 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AWQ22_13490 SM00989 AWQ22_13490 AWQ22_13595 SM00244 prohibitin homologues AWQ22_13600 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AWQ22_13615 SM00331 Sigma factor PP2C-like phosphatases AWQ22_13615 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AWQ22_13690 SM00704 CDGSH-type zinc finger. Function unknown. AWQ22_13715 SM00382 ATPases associated with a variety of cellular activities AWQ22_13735 SM01400 AWQ22_13735 AWQ22_13745 SM00382 ATPases associated with a variety of cellular activities AWQ22_13765 SM00240 Forkhead associated domain AWQ22_13775 SM00220 Serine/Threonine protein kinases, catalytic domain AWQ22_13805 SM00478 endonuclease III AWQ22_13900 SM00052 Putative diguanylate phosphodiesterase AWQ22_13900 SM00116 Domain in cystathionine beta-synthase and other proteins. AWQ22_13905 SM00327 von Willebrand factor (vWF) type A domain AWQ22_13910 SM00363 S4 RNA-binding domain AWQ22_13920 SM00257 Lysin motif AWQ22_13975 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AWQ22_13975 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AWQ22_13980 SM00028 Tetratricopeptide repeats AWQ22_14225 SM00382 ATPases associated with a variety of cellular activities AWQ22_14245 SM00382 ATPases associated with a variety of cellular activities AWQ22_14245 SM00962 SRP54-type protein, GTPase domain AWQ22_14245 SM00963 SRP54-type protein, helical bundle domain AWQ22_14250 SM00363 S4 RNA-binding domain AWQ22_14335 SM00267 diguanylate cyclase AWQ22_14335 SM00448 cheY-homologous receiver domain AWQ22_14340 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AWQ22_14340 SM00954 Region found in RelA / SpoT proteins AWQ22_14355 SM00387 Histidine kinase-like ATPases AWQ22_14355 SM00388 His Kinase A (phosphoacceptor) domain AWQ22_14355 SM01248 AWQ22_14355 AWQ22_14375 SM00382 ATPases associated with a variety of cellular activities AWQ22_14390 SM01001 AIR carboxylase AWQ22_14410 SM00670 Large family of predicted nucleotide-binding domains AWQ22_14415 SM00729 Elongator protein 3, MiaB family, Radical SAM AWQ22_14435 SM00387 Histidine kinase-like ATPases AWQ22_14435 SM00388 His Kinase A (phosphoacceptor) domain AWQ22_14435 SM00448 cheY-homologous receiver domain AWQ22_14455 SM00382 ATPases associated with a variety of cellular activities AWQ22_14550 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AWQ22_14550 SM00091 PAS domain AWQ22_14550 SM00320 WD40 repeats AWQ22_14640 SM00267 diguanylate cyclase AWQ22_14650 SM00849 Metallo-beta-lactamase superfamily AWQ22_14655 SM00450 Rhodanese Homology Domain AWQ22_14665 SM00052 Putative diguanylate phosphodiesterase AWQ22_14665 SM00267 diguanylate cyclase AWQ22_14665 SM00448 cheY-homologous receiver domain AWQ22_14675 SM00327 von Willebrand factor (vWF) type A domain AWQ22_14680 SM00840 AWQ22_14680 AWQ22_14715 SM00487 DEAD-like helicases superfamily AWQ22_14715 SM00490 helicase superfamily c-terminal domain AWQ22_14720 SM00670 Large family of predicted nucleotide-binding domains AWQ22_14735 SM00857 Resolvase, N terminal domain AWQ22_14815 SM00487 DEAD-like helicases superfamily AWQ22_14825 SM00530 Helix-turn-helix XRE-family like proteins AWQ22_14840 SM00487 DEAD-like helicases superfamily AWQ22_14840 SM00490 helicase superfamily c-terminal domain AWQ22_15025 SM00477 DNA/RNA non-specific endonuclease AWQ22_15025 SM00892 DNA/RNA non-specific endonuclease AWQ22_15030 SM00487 DEAD-like helicases superfamily AWQ22_15030 SM00490 helicase superfamily c-terminal domain AWQ22_15075 SM00670 Large family of predicted nucleotide-binding domains AWQ22_15135 SM00382 ATPases associated with a variety of cellular activities AWQ22_15165 SM00966 SpoVT / AbrB like domain AWQ22_15175 SM00382 ATPases associated with a variety of cellular activities AWQ22_15190 SM00698 Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases. AWQ22_15210 SM00342 helix_turn_helix, arabinose operon control protein AWQ22_15225 SM00342 helix_turn_helix, arabinose operon control protein AWQ22_15230 SM00382 ATPases associated with a variety of cellular activities AWQ22_15250 SM00342 helix_turn_helix, arabinose operon control protein AWQ22_15265 SM00382 ATPases associated with a variety of cellular activities AWQ22_15305 SM00382 ATPases associated with a variety of cellular activities AWQ22_15330 SM00342 helix_turn_helix, arabinose operon control protein AWQ22_15375 SM01004 Delta-aminolevulinic acid dehydratase AWQ22_15445 SM00382 ATPases associated with a variety of cellular activities AWQ22_15465 SM00382 ATPases associated with a variety of cellular activities AWQ22_15510 SM00267 diguanylate cyclase AWQ22_15510 SM01079 AWQ22_15510 AWQ22_15535 SM00448 cheY-homologous receiver domain AWQ22_15535 SM00862 Transcriptional regulatory protein, C terminal AWQ22_15540 SM00387 Histidine kinase-like ATPases AWQ22_15540 SM00388 His Kinase A (phosphoacceptor) domain AWQ22_15580 SM00470 ParB-like nuclease domain AWQ22_15605 SM00342 helix_turn_helix, arabinose operon control protein AWQ22_15635 SM00831 Cation transporter/ATPase, N-terminus AWQ22_15645 SM00382 ATPases associated with a variety of cellular activities AWQ22_15705 SM01006 Siderophore biosynthesis protein domain AWQ22_15735 SM00530 Helix-turn-helix XRE-family like proteins AWQ22_15780 SM00327 von Willebrand factor (vWF) type A domain AWQ22_15785 SM00422 helix_turn_helix, mercury resistance AWQ22_15830 SM00966 SpoVT / AbrB like domain AWQ22_15885 SM00470 ParB-like nuclease domain AWQ22_15980 SM00490 helicase superfamily c-terminal domain AWQ22_16035 SM00028 Tetratricopeptide repeats AWQ22_16050 SM00028 Tetratricopeptide repeats AWQ22_16145 SM00530 Helix-turn-helix XRE-family like proteins AWQ22_16210 SM00530 Helix-turn-helix XRE-family like proteins AWQ22_16220 SM00487 DEAD-like helicases superfamily