M744_00010 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. M744_00020 SM00382 ATPases associated with a variety of cellular activities M744_00115 SM00240 Forkhead associated domain M744_00120 SM00382 ATPases associated with a variety of cellular activities M744_00125 SM00487 DEAD-like helicases superfamily M744_00125 SM00490 helicase superfamily c-terminal domain M744_00140 SM00382 ATPases associated with a variety of cellular activities M744_00160 SM00448 cheY-homologous receiver domain M744_00160 SM00862 Transcriptional regulatory protein, C terminal M744_00235 SM00729 Elongator protein 3, MiaB family, Radical SAM M744_00260 SM00861 Transketolase, pyrimidine binding domain M744_00265 SM00825 Beta-ketoacyl synthase M744_00270 SM00823 Phosphopantetheine attachment site M744_00300 SM00028 Tetratricopeptide repeats M744_00360 SM00877 M744_00360 M744_00380 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. M744_00380 SM00245 tail specific protease M744_00395 SM00382 ATPases associated with a variety of cellular activities M744_00500 SM00904 Riboflavin kinase M744_00510 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) M744_00510 SM00091 PAS domain M744_00510 SM00267 diguanylate cyclase M744_00535 SM00855 Phosphoglycerate mutase family M744_00560 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. M744_00560 SM00387 Histidine kinase-like ATPases M744_00560 SM00388 His Kinase A (phosphoacceptor) domain M744_00565 SM00838 Elongation factor G C-terminus M744_00630 SM00235 Zinc-dependent metalloprotease M744_00650 SM00226 Low molecular weight phosphatase family M744_00700 SM00387 Histidine kinase-like ATPases M744_00700 SM00388 His Kinase A (phosphoacceptor) domain M744_00730 SM00478 endonuclease III M744_00730 SM00525 M744_00730 M744_00760 SM01001 AIR carboxylase M744_00820 SM00861 Transketolase, pyrimidine binding domain M744_00830 SM00917 LeuA allosteric (dimerisation) domain M744_00835 SM00382 ATPases associated with a variety of cellular activities M744_00875 SM00729 Elongator protein 3, MiaB family, Radical SAM M744_00875 SM00876 Biotin and Thiamin Synthesis associated domain M744_00885 SM00382 ATPases associated with a variety of cellular activities M744_00960 SM00937 M744_00960 M744_01000 SM00798 AICARFT/IMPCHase bienzyme M744_01000 SM00851 MGS-like domain M744_01020 SM00925 MltA specific insert domain M744_01190 SM01093 M744_01190 M744_01200 SM00897 FIST N domain M744_01200 SM01204 M744_01200 M744_01260 SM00382 ATPases associated with a variety of cellular activities M744_01270 SM00382 ATPases associated with a variety of cellular activities M744_01390 SM01094 CpcD/allophycocyanin linker domain M744_01410 SM00938 Nitrogen regulatory protein P-II M744_01420 SM00363 S4 RNA-binding domain M744_01440 SM00998 Adenylosuccinate lyase C-terminus M744_01460 SM00650 Ribosomal RNA adenine dimethylases M744_01505 SM00155 Phospholipase D. Active site motifs. M744_01530 SM00382 ATPases associated with a variety of cellular activities M744_01575 SM00957 SecA DEAD-like domain M744_01575 SM00958 SecA preprotein cross-linking domain M744_01595 SM00877 M744_01595 M744_01600 SM00877 M744_01600 M744_01620 SM00852 Probable molybdopterin binding domain M744_01625 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region M744_01635 SM00278 Helix-hairpin-helix DNA-binding motif class 1 M744_01635 SM00292 breast cancer carboxy-terminal domain M744_01635 SM00532 Ligase N family M744_01670 SM00028 Tetratricopeptide repeats M744_01695 SM00271 DnaJ molecular chaperone homology domain M744_01725 SM00382 ATPases associated with a variety of cellular activities M744_01725 SM01086 C-terminal, D2-small domain, of ClpB protein M744_01750 SM00382 ATPases associated with a variety of cellular activities M744_01755 SM00434 DNA Topoisomerase IV M744_01765 SM01093 M744_01765 M744_01770 SM00479 M744_01770 M744_01780 SM00382 ATPases associated with a variety of cellular activities M744_01795 SM00062 Bacterial periplasmic substrate-binding proteins M744_01800 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M744_01855 SM00100 Cyclic nucleotide-monophosphate binding domain M744_01860 SM00100 Cyclic nucleotide-monophosphate binding domain M744_01965 SM00829 Enoylreductase M744_02015 SM00028 Tetratricopeptide repeats M744_02085 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs M744_02085 SM00474 3'-5' exonuclease M744_02085 SM00475 5'-3' exonuclease M744_02085 SM00482 DNA polymerase A domain M744_02115 SM00052 Putative diguanylate phosphodiesterase M744_02115 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) M744_02115 SM00091 PAS domain M744_02115 SM00267 diguanylate cyclase M744_02150 SM00382 ATPases associated with a variety of cellular activities M744_02165 SM00382 ATPases associated with a variety of cellular activities M744_02210 SM01230 M744_02210 M744_02265 SM00232 JAB/MPN domain M744_02270 SM00450 Rhodanese Homology Domain M744_02305 SM00267 diguanylate cyclase M744_02305 SM00448 cheY-homologous receiver domain M744_02350 SM00861 Transketolase, pyrimidine binding domain M744_02410 SM00100 Cyclic nucleotide-monophosphate binding domain M744_02420 SM00732 Likely ribonuclease with RNase H fold. M744_02430 SM00100 Cyclic nucleotide-monophosphate binding domain M744_02430 SM00419 helix_turn_helix, cAMP Regulatory protein M744_02460 SM00052 Putative diguanylate phosphodiesterase M744_02485 SM00845 GatB domain M744_02525 SM00530 Helix-turn-helix XRE-family like proteins M744_02535 SM00470 ParB-like nuclease domain M744_02560 SM00248 ankyrin repeats M744_02605 SM00448 cheY-homologous receiver domain M744_02605 SM00862 Transcriptional regulatory protein, C terminal M744_02630 SM00345 helix_turn_helix gluconate operon transcriptional repressor M744_02650 SM00849 Metallo-beta-lactamase superfamily M744_02660 SM00642 Alpha-amylase domain M744_02680 SM00382 ATPases associated with a variety of cellular activities M744_02685 SM00363 S4 RNA-binding domain M744_02705 SM00530 Helix-turn-helix XRE-family like proteins M744_02710 SM00062 Bacterial periplasmic substrate-binding proteins M744_02710 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. M744_02715 SM01011 Aminopeptidase P, N-terminal domain M744_02755 SM00382 ATPases associated with a variety of cellular activities M744_02780 SM00195 Dual specificity phosphatase, catalytic domain M744_02845 SM00028 Tetratricopeptide repeats M744_02865 SM00028 Tetratricopeptide repeats M744_02875 SM00028 Tetratricopeptide repeats M744_02900 SM00905 Dihydroneopterin aldolase M744_02905 SM01350 M744_02905 M744_03025 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. M744_03100 SM00480 DNA polymerase III beta subunit M744_03140 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain M744_03185 SM01118 M744_03185 M744_03195 SM01091 Transporter associated domain M744_03285 SM00271 DnaJ molecular chaperone homology domain M744_03335 SM00382 ATPases associated with a variety of cellular activities M744_03360 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family M744_03380 SM00841 Elongation factor P, C-terminal M744_03380 SM01185 M744_03380 M744_03420 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region M744_03495 SM00986 Uracil DNA glycosylase superfamily M744_03495 SM00987 UreE urease accessory protein, C-terminal domain M744_03540 SM00028 Tetratricopeptide repeats M744_03540 SM00271 DnaJ molecular chaperone homology domain M744_03545 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. M744_03545 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) M744_03545 SM00091 PAS domain M744_03545 SM00267 diguanylate cyclase M744_03550 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. M744_03550 SM00267 diguanylate cyclase M744_03590 SM00382 ATPases associated with a variety of cellular activities M744_03590 SM00994 ClpX C4-type zinc finger M744_03590 SM01086 C-terminal, D2-small domain, of ClpB protein M744_03615 SM00670 Large family of predicted nucleotide-binding domains M744_03625 SM00052 Putative diguanylate phosphodiesterase M744_03625 SM00267 diguanylate cyclase M744_03675 SM00729 Elongator protein 3, MiaB family, Radical SAM M744_03740 SM00244 prohibitin homologues M744_03745 SM00244 prohibitin homologues M744_03750 SM00562 M744_03750 M744_03770 SM00382 ATPases associated with a variety of cellular activities M744_03775 SM00382 ATPases associated with a variety of cellular activities M744_03785 SM00387 Histidine kinase-like ATPases M744_03785 SM00433 TopoisomeraseII M744_03825 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. M744_03855 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. M744_03855 SM00331 Sigma factor PP2C-like phosphatases M744_03860 SM00382 ATPases associated with a variety of cellular activities M744_03860 SM00962 SRP54-type protein, GTPase domain M744_03860 SM00963 SRP54-type protein, helical bundle domain M744_03890 SM00448 cheY-homologous receiver domain M744_03890 SM00862 Transcriptional regulatory protein, C terminal M744_04035 SM00382 ATPases associated with a variety of cellular activities M744_04040 SM00316 Ribosomal protein S1-like RNA-binding domain M744_04040 SM00322 K homology RNA-binding domain M744_04110 SM00450 Rhodanese Homology Domain M744_04130 SM01228 M744_04130 M744_04165 SM00448 cheY-homologous receiver domain M744_04165 SM00862 Transcriptional regulatory protein, C terminal M744_04185 SM00244 prohibitin homologues M744_04200 SM00788 Adenylosuccinate synthetase M744_04270 SM00732 Likely ribonuclease with RNase H fold. M744_04315 SM00271 DnaJ molecular chaperone homology domain M744_04320 SM00835 Cupin M744_04340 SM00890 Domain of unknown function M744_04345 SM00670 Large family of predicted nucleotide-binding domains M744_04350 SM00729 Elongator protein 3, MiaB family, Radical SAM M744_04370 SM00864 Tubulin/FtsZ family, GTPase domain M744_04370 SM00865 Tubulin/FtsZ family, C-terminal domain M744_04390 SM00729 Elongator protein 3, MiaB family, Radical SAM M744_04395 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain M744_04465 SM00646 M744_04465 M744_04485 SM00419 helix_turn_helix, cAMP Regulatory protein M744_04520 SM00382 ATPases associated with a variety of cellular activities M744_04570 SM00382 ATPases associated with a variety of cellular activities M744_04590 SM00644 M744_04590 M744_04630 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. M744_04630 SM00245 tail specific protease M744_04635 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. M744_04640 SM00028 Tetratricopeptide repeats M744_04655 SM00567 E-Z type HEAT repeats M744_04680 SM00028 Tetratricopeptide repeats M744_04695 SM00530 Helix-turn-helix XRE-family like proteins M744_04715 SM00382 ATPases associated with a variety of cellular activities M744_04720 SM00883 Chaperonin 10 Kd subunit M744_04770 SM00271 DnaJ molecular chaperone homology domain M744_04775 SM00448 cheY-homologous receiver domain M744_04775 SM00862 Transcriptional regulatory protein, C terminal M744_04805 SM01387 M744_04805 M744_04810 SM00278 Helix-hairpin-helix DNA-binding motif class 1 M744_04820 SM01230 M744_04820 M744_04845 SM00116 Domain in cystathionine beta-synthase and other proteins. M744_04890 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. M744_04890 SM00387 Histidine kinase-like ATPases M744_04890 SM00388 His Kinase A (phosphoacceptor) domain M744_04900 SM00028 Tetratricopeptide repeats M744_04945 SM00327 von Willebrand factor (vWF) type A domain M744_04945 SM00382 ATPases associated with a variety of cellular activities M744_04995 SM00421 helix_turn_helix, Lux Regulon M744_05090 SM00411 bacterial (prokaryotic) histone like domain M744_05100 SM00533 DNA-binding domain of DNA mismatch repair MUTS family M744_05100 SM00534 ATPase domain of DNA mismatch repair MUTS family M744_05130 SM00388 His Kinase A (phosphoacceptor) domain M744_05160 SM00382 ATPases associated with a variety of cellular activities M744_05195 SM01382 M744_05195 M744_05195 SM01383 M744_05195 M744_05210 SM00322 K homology RNA-binding domain M744_05230 SM01374 M744_05230 M744_05235 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. M744_05295 SM00662 RNA polymerases D M744_05325 SM00937 M744_05325 M744_05330 SM00507 HNH nucleases M744_05335 SM01005 Alanine racemase, C-terminal domain M744_05350 SM00306 Hint (Hedgehog/Intein) domain N-terminal region M744_05350 SM00481 DNA polymerase alpha chain like domain M744_05355 SM00933 M744_05355 M744_05360 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase M744_05370 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain M744_05370 SM01080 M744_05370 M744_05380 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. M744_05380 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. M744_05385 SM00267 diguanylate cyclase M744_05450 SM00046 Diacylglycerol kinase catalytic domain (presumed) M744_05475 SM00419 helix_turn_helix, cAMP Regulatory protein M744_05575 SM01230 M744_05575 M744_05615 SM00382 ATPases associated with a variety of cellular activities M744_05635 SM00318 Staphylococcal nuclease homologues M744_05700 SM00646 M744_05700 M744_05730 SM00930 M744_05730 M744_05765 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain M744_05775 SM00535 Ribonuclease III family M744_05780 SM00967 RNA 2'-O ribose methyltransferase substrate binding M744_05810 SM00387 Histidine kinase-like ATPases M744_05810 SM00388 His Kinase A (phosphoacceptor) domain M744_05810 SM01248 M744_05810 M744_05815 SM01400 M744_05815 M744_05835 SM00382 ATPases associated with a variety of cellular activities M744_05855 SM00382 ATPases associated with a variety of cellular activities M744_05860 SM01116 M744_05860 M744_05900 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. M744_05900 SM00116 Domain in cystathionine beta-synthase and other proteins. M744_05900 SM00267 diguanylate cyclase M744_05910 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. M744_05935 SM00756 M744_05935 M744_05975 SM00838 Elongation factor G C-terminus M744_05975 SM00889 Elongation factor G, domain IV M744_06000 SM00855 Phosphoglycerate mutase family M744_06020 SM00271 DnaJ molecular chaperone homology domain M744_06025 SM00842 Cell division protein FtsA M744_06035 SM00382 ATPases associated with a variety of cellular activities M744_06040 SM00382 ATPases associated with a variety of cellular activities M744_06105 SM01207 M744_06105 M744_06175 SM00968 SMC proteins Flexible Hinge Domain M744_06210 SM00530 Helix-turn-helix XRE-family like proteins M744_06295 SM00322 K homology RNA-binding domain M744_06355 SM00849 Metallo-beta-lactamase superfamily M744_06370 SM00903 Flavin reductase like domain M744_06395 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. M744_06415 SM00240 Forkhead associated domain M744_06420 SM00360 RNA recognition motif M744_06425 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. M744_06450 SM01007 Class II Aldolase and Adducin N-terminal domain M744_06565 SM00028 Tetratricopeptide repeats M744_06635 SM00100 Cyclic nucleotide-monophosphate binding domain M744_06700 SM00465 GIY-YIG type nucleases (URI domain) M744_06730 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M744_06830 SM00530 Helix-turn-helix XRE-family like proteins M744_06880 SM00316 Ribosomal protein S1-like RNA-binding domain M744_06880 SM00357 Cold shock protein domain M744_06880 SM00955 M744_06880 M744_06910 SM00100 Cyclic nucleotide-monophosphate binding domain M744_06910 SM00382 ATPases associated with a variety of cellular activities M744_06970 SM00382 ATPases associated with a variety of cellular activities M744_06975 SM00450 Rhodanese Homology Domain M744_07055 SM00460 Transglutaminase/protease-like homologues M744_07075 SM00448 cheY-homologous receiver domain M744_07075 SM00862 Transcriptional regulatory protein, C terminal M744_07080 SM00387 Histidine kinase-like ATPases M744_07080 SM00388 His Kinase A (phosphoacceptor) domain M744_07145 SM00421 helix_turn_helix, Lux Regulon M744_07145 SM00448 cheY-homologous receiver domain M744_07220 SM00859 Semialdehyde dehydrogenase, NAD binding domain M744_07225 SM01130 M744_07225 M744_07230 SM00849 Metallo-beta-lactamase superfamily M744_07315 SM01240 M744_07315 M744_07350 SM00116 Domain in cystathionine beta-synthase and other proteins. M744_07355 SM00567 E-Z type HEAT repeats M744_07385 SM00448 cheY-homologous receiver domain M744_07390 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain M744_07390 SM00387 Histidine kinase-like ATPases M744_07390 SM00388 His Kinase A (phosphoacceptor) domain M744_07390 SM00448 cheY-homologous receiver domain M744_07395 SM00388 His Kinase A (phosphoacceptor) domain M744_07395 SM00448 cheY-homologous receiver domain M744_07400 SM00100 Cyclic nucleotide-monophosphate binding domain M744_07405 SM00387 Histidine kinase-like ATPases M744_07415 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) M744_07415 SM00091 PAS domain M744_07415 SM00267 diguanylate cyclase M744_07420 SM00849 Metallo-beta-lactamase superfamily M744_07420 SM00903 Flavin reductase like domain M744_07425 SM00849 Metallo-beta-lactamase superfamily M744_07425 SM00903 Flavin reductase like domain M744_07515 SM01004 Delta-aminolevulinic acid dehydratase M744_07530 SM00271 DnaJ molecular chaperone homology domain M744_07580 SM00853 MutL C terminal dimerisation domain M744_07580 SM01340 M744_07580 M744_07625 SM00382 ATPases associated with a variety of cellular activities M744_07625 SM00962 SRP54-type protein, GTPase domain M744_07625 SM00963 SRP54-type protein, helical bundle domain M744_07680 SM01002 Alanine dehydrogenase/PNT, C-terminal domain M744_07680 SM01003 Alanine dehydrogenase/PNT, N-terminal domain M744_07720 SM00185 Armadillo/beta-catenin-like repeats M744_07720 SM00567 E-Z type HEAT repeats M744_07770 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M744_07785 SM00422 helix_turn_helix, mercury resistance M744_07800 SM00382 ATPases associated with a variety of cellular activities M744_07855 SM00345 helix_turn_helix gluconate operon transcriptional repressor M744_07880 SM00567 E-Z type HEAT repeats M744_07895 SM01329 M744_07895 M744_07910 SM00052 Putative diguanylate phosphodiesterase M744_07910 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) M744_07910 SM00091 PAS domain M744_07910 SM00267 diguanylate cyclase M744_07975 SM00872 Alpha mannosidase, middle domain M744_08005 SM00704 CDGSH-type zinc finger. Function unknown. M744_08020 SM00434 DNA Topoisomerase IV M744_08025 SM00448 cheY-homologous receiver domain M744_08040 SM00450 Rhodanese Homology Domain M744_08065 SM00419 helix_turn_helix, cAMP Regulatory protein M744_08070 SM00930 M744_08070 M744_08085 SM00382 ATPases associated with a variety of cellular activities M744_08175 SM00840 M744_08175 M744_08225 SM00729 Elongator protein 3, MiaB family, Radical SAM M744_08260 SM00358 Double-stranded RNA binding motif M744_08260 SM00535 Ribonuclease III family M744_08270 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. M744_08270 SM00267 diguanylate cyclase M744_08290 SM00382 ATPases associated with a variety of cellular activities M744_08330 SM00271 DnaJ molecular chaperone homology domain M744_08420 SM01234 M744_08420 M744_08425 SM00363 S4 RNA-binding domain M744_08425 SM01390 M744_08425 M744_08445 SM00382 ATPases associated with a variety of cellular activities M744_08450 SM00382 ATPases associated with a variety of cellular activities M744_08515 SM00363 S4 RNA-binding domain M744_08525 SM01329 M744_08525 M744_08540 SM00729 Elongator protein 3, MiaB family, Radical SAM M744_08580 SM00331 Sigma factor PP2C-like phosphatases M744_08580 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain M744_08585 SM00855 Phosphoglycerate mutase family M744_08590 SM00388 His Kinase A (phosphoacceptor) domain M744_08620 SM00663 RNA polymerase I subunit A N-terminus M744_08675 SM00950 M744_08675 M744_08725 SM00955 M744_08725 M744_08760 SM00481 DNA polymerase alpha chain like domain M744_08930 SM00836 DALR anticodon binding domain M744_08930 SM01016 Arginyl tRNA synthetase N terminal dom M744_08945 SM00404 Protein tyrosine phosphatase, catalytic domain motif M744_08955 SM00631 M744_08955 M744_08975 SM00644 M744_08975 M744_08985 SM00387 Histidine kinase-like ATPases M744_08985 SM00388 His Kinase A (phosphoacceptor) domain M744_08995 SM00116 Domain in cystathionine beta-synthase and other proteins. M744_09010 SM00316 Ribosomal protein S1-like RNA-binding domain M744_09090 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. M744_09125 SM01002 Alanine dehydrogenase/PNT, C-terminal domain M744_09125 SM01003 Alanine dehydrogenase/PNT, N-terminal domain M744_09160 SM00393 Putative single-stranded nucleic acids-binding domain M744_09170 SM00382 ATPases associated with a variety of cellular activities M744_09175 SM00729 Elongator protein 3, MiaB family, Radical SAM M744_09230 SM00028 Tetratricopeptide repeats M744_09285 SM00563 Phosphate acyltransferases M744_09290 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. M744_09305 SM00448 cheY-homologous receiver domain M744_09305 SM00862 Transcriptional regulatory protein, C terminal M744_09310 SM00382 ATPases associated with a variety of cellular activities M744_09320 SM00382 ATPases associated with a variety of cellular activities M744_09335 SM00947 Carbonic anhydrase M744_09420 SM00859 Semialdehyde dehydrogenase, NAD binding domain M744_09455 SM00961 Ribulose bisphosphate carboxylase, small chain M744_09465 SM00877 M744_09465 M744_09475 SM00961 Ribulose bisphosphate carboxylase, small chain M744_09485 SM00877 M744_09485 M744_09510 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain M744_09510 SM00437 Bacterial DNA topoisomerase I DNA-binding domain M744_09510 SM00493 M744_09510 M744_09520 SM00382 ATPases associated with a variety of cellular activities M744_09540 SM00917 LeuA allosteric (dimerisation) domain M744_09560 SM00382 ATPases associated with a variety of cellular activities M744_09575 SM00448 cheY-homologous receiver domain M744_09575 SM00862 Transcriptional regulatory protein, C terminal M744_09580 SM00849 Metallo-beta-lactamase superfamily M744_09595 SM00633 Glycosyl hydrolase family 10 M744_09625 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. M744_09640 SM00382 ATPases associated with a variety of cellular activities M744_09655 SM01057 Eukaryotic-type carbonic anhydrase M744_09685 SM00052 Putative diguanylate phosphodiesterase M744_09685 SM00091 PAS domain M744_09685 SM00267 diguanylate cyclase M744_09690 SM00382 ATPases associated with a variety of cellular activities M744_09700 SM00878 Biotin carboxylase C-terminal domain M744_09715 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. M744_09715 SM00954 Region found in RelA / SpoT proteins M744_09745 SM01018 B12 binding domain M744_09760 SM00493 M744_09760 M744_09830 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. M744_09830 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) M744_09830 SM00091 PAS domain M744_09830 SM00387 Histidine kinase-like ATPases M744_09830 SM00388 His Kinase A (phosphoacceptor) domain M744_09835 SM00448 cheY-homologous receiver domain M744_09840 SM00052 Putative diguanylate phosphodiesterase M744_09840 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) M744_09840 SM00091 PAS domain M744_09840 SM00267 diguanylate cyclase M744_09840 SM00448 cheY-homologous receiver domain M744_09990 SM00487 DEAD-like helicases superfamily M744_09990 SM00490 helicase superfamily c-terminal domain M744_09990 SM00982 M744_09990 M744_09990 SM01058 CarD-like/TRCF domain M744_09995 SM00382 ATPases associated with a variety of cellular activities M744_10000 SM00487 DEAD-like helicases superfamily M744_10000 SM00490 helicase superfamily c-terminal domain M744_10000 SM01142 M744_10000 M744_10005 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain M744_10005 SM01232 M744_10005 M744_10020 SM00880 M744_10020 M744_10035 SM00382 ATPases associated with a variety of cellular activities M744_10050 SM00382 ATPases associated with a variety of cellular activities M744_10100 SM00382 ATPases associated with a variety of cellular activities M744_10120 SM00487 DEAD-like helicases superfamily M744_10120 SM00490 helicase superfamily c-terminal domain M744_10135 SM00267 diguanylate cyclase M744_10140 SM00919 Malic enzyme, NAD binding domain M744_10140 SM01274 M744_10140 M744_10150 SM00563 Phosphate acyltransferases M744_10155 SM00220 Serine/Threonine protein kinases, catalytic domain M744_10160 SM00873 B3/4 domain M744_10160 SM00874 tRNA synthetase B5 domain M744_10160 SM00896 Ferredoxin-fold anticodon binding domain M744_10165 SM00400 zinc finger M744_10165 SM00493 M744_10165 M744_10170 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor M744_10195 SM00852 Probable molybdopterin binding domain M744_10200 SM00852 Probable molybdopterin binding domain M744_10215 SM00729 Elongator protein 3, MiaB family, Radical SAM M744_10250 SM00062 Bacterial periplasmic substrate-binding proteins M744_10260 SM00028 Tetratricopeptide repeats M744_10285 SM00116 Domain in cystathionine beta-synthase and other proteins. M744_10285 SM00924 MgtE intracellular N domain M744_10320 SM00981 M744_10320 M744_10365 SM00100 Cyclic nucleotide-monophosphate binding domain M744_10415 SM00382 ATPases associated with a variety of cellular activities M744_10425 SM00100 Cyclic nucleotide-monophosphate binding domain M744_10455 SM00382 ATPases associated with a variety of cellular activities M744_10460 SM00382 ATPases associated with a variety of cellular activities M744_10465 SM00926 Molybdopterin oxidoreductase Fe4S4 domain M744_10505 SM00278 Helix-hairpin-helix DNA-binding motif class 1 M744_10540 SM00448 cheY-homologous receiver domain M744_10555 SM01247 M744_10555 M744_10560 SM01248 M744_10560 M744_10655 SM00967 RNA 2'-O ribose methyltransferase substrate binding M744_10685 SM00563 Phosphate acyltransferases M744_10695 SM00072 Guanylate kinase homologues. M744_10805 SM01001 AIR carboxylase M744_10815 SM00857 Resolvase, N terminal domain M744_10855 SM00347 helix_turn_helix multiple antibiotic resistance protein M744_10860 SM00052 Putative diguanylate phosphodiesterase M744_10860 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. M744_10860 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) M744_10860 SM00091 PAS domain M744_10860 SM00267 diguanylate cyclase M744_10915 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. M744_10915 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. M744_10980 SM00567 E-Z type HEAT repeats M744_10995 SM00382 ATPases associated with a variety of cellular activities M744_11010 SM00331 Sigma factor PP2C-like phosphatases M744_11010 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain M744_11040 SM00073 Histidine Phosphotransfer domain M744_11045 SM00955 M744_11045 M744_11105 SM00363 S4 RNA-binding domain M744_11110 SM00220 Serine/Threonine protein kinases, catalytic domain M744_11115 SM00448 cheY-homologous receiver domain M744_11125 SM00411 bacterial (prokaryotic) histone like domain M744_11130 SM00028 Tetratricopeptide repeats M744_11160 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. M744_11165 SM00382 ATPases associated with a variety of cellular activities M744_11165 SM00760 Bacterial dnaA protein helix-turn-helix domain M744_11220 SM00382 ATPases associated with a variety of cellular activities M744_11220 SM01086 C-terminal, D2-small domain, of ClpB protein M744_11240 SM00642 Alpha-amylase domain M744_11255 SM00831 Cation transporter/ATPase, N-terminus M744_11280 SM00487 DEAD-like helicases superfamily M744_11280 SM00490 helicase superfamily c-terminal domain M744_11350 SM00487 DEAD-like helicases superfamily M744_11400 SM00530 Helix-turn-helix XRE-family like proteins M744_11405 SM00567 E-Z type HEAT repeats M744_11410 SM00567 E-Z type HEAT repeats M744_11425 SM01094 CpcD/allophycocyanin linker domain M744_11430 SM01094 CpcD/allophycocyanin linker domain M744_11435 SM01094 CpcD/allophycocyanin linker domain M744_11515 SM00460 Transglutaminase/protease-like homologues M744_11565 SM00028 Tetratricopeptide repeats M744_11585 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain M744_11610 SM00260 Two component signalling adaptor domain M744_11615 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). M744_11615 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain M744_11620 SM00073 Histidine Phosphotransfer domain M744_11620 SM00260 Two component signalling adaptor domain M744_11620 SM00387 Histidine kinase-like ATPases M744_11620 SM00448 cheY-homologous receiver domain M744_11620 SM01231 M744_11620 M744_11635 SM00448 cheY-homologous receiver domain M744_11635 SM00862 Transcriptional regulatory protein, C terminal M744_11640 SM00091 PAS domain M744_11640 SM00387 Histidine kinase-like ATPases M744_11640 SM00388 His Kinase A (phosphoacceptor) domain M744_11645 SM00363 S4 RNA-binding domain M744_11650 SM00530 Helix-turn-helix XRE-family like proteins M744_11670 SM00028 Tetratricopeptide repeats M744_11710 SM00382 ATPases associated with a variety of cellular activities M744_11785 SM01133 M744_11785 M744_11820 SM01094 CpcD/allophycocyanin linker domain M744_11830 SM00116 Domain in cystathionine beta-synthase and other proteins. M744_11850 SM00959 Rho termination factor, N-terminal domain M744_11900 SM00382 ATPases associated with a variety of cellular activities M744_11920 SM00833 Cobalamin synthesis protein cobW C-terminal domain M744_11965 SM00382 ATPases associated with a variety of cellular activities M744_12000 SM00382 ATPases associated with a variety of cellular activities M744_12005 SM00382 ATPases associated with a variety of cellular activities M744_12015 SM00530 Helix-turn-helix XRE-family like proteins M744_12025 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor M744_12030 SM00849 Metallo-beta-lactamase superfamily M744_12035 SM00450 Rhodanese Homology Domain M744_12095 SM01209 M744_12095 M744_12095 SM01210 M744_12095 M744_12100 SM00091 PAS domain M744_12100 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain M744_12100 SM00387 Histidine kinase-like ATPases M744_12100 SM00388 His Kinase A (phosphoacceptor) domain M744_12135 SM00930 M744_12135 M744_12175 SM00382 ATPases associated with a variety of cellular activities M744_12275 SM00729 Elongator protein 3, MiaB family, Radical SAM M744_12310 SM00838 Elongation factor G C-terminus M744_12310 SM00889 Elongation factor G, domain IV M744_12320 SM01403 M744_12320 M744_12325 SM00464 Found in ATP-dependent protease La (LON) M744_12345 SM00316 Ribosomal protein S1-like RNA-binding domain M744_12355 SM00729 Elongator protein 3, MiaB family, Radical SAM M744_12360 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain M744_12370 SM00487 DEAD-like helicases superfamily M744_12370 SM00490 helicase superfamily c-terminal domain M744_12440 SM00260 Two component signalling adaptor domain M744_12445 SM00073 Histidine Phosphotransfer domain M744_12445 SM00260 Two component signalling adaptor domain M744_12445 SM00387 Histidine kinase-like ATPases M744_12445 SM00448 cheY-homologous receiver domain M744_12445 SM01231 M744_12445 M744_12450 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. M744_12450 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). M744_12450 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain M744_12455 SM00260 Two component signalling adaptor domain M744_12460 SM00448 cheY-homologous receiver domain M744_12465 SM00448 cheY-homologous receiver domain M744_12500 SM00382 ATPases associated with a variety of cellular activities M744_12505 SM00382 ATPases associated with a variety of cellular activities M744_12515 SM00481 DNA polymerase alpha chain like domain M744_12545 SM00729 Elongator protein 3, MiaB family, Radical SAM M744_12565 SM00382 ATPases associated with a variety of cellular activities M744_12595 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. M744_12615 SM00833 Cobalamin synthesis protein cobW C-terminal domain M744_12655 SM01211 M744_12655 M744_12670 SM00052 Putative diguanylate phosphodiesterase M744_12670 SM00267 diguanylate cyclase M744_12675 SM00382 ATPases associated with a variety of cellular activities M744_12690 SM00028 Tetratricopeptide repeats M744_12690 SM00271 DnaJ molecular chaperone homology domain M744_12755 SM00729 Elongator protein 3, MiaB family, Radical SAM M744_12800 SM00360 RNA recognition motif M744_12835 SM00382 ATPases associated with a variety of cellular activities M744_12845 SM00220 Serine/Threonine protein kinases, catalytic domain M744_12850 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. M744_12905 SM00530 Helix-turn-helix XRE-family like proteins M744_12910 SM00530 Helix-turn-helix XRE-family like proteins M744_13115 SM00778 Zinc-binding domain of primase-helicase M744_13120 SM00990 M744_13120 M744_13125 SM00487 DEAD-like helicases superfamily M744_13125 SM00490 helicase superfamily c-terminal domain M744_13215 SM00287 Bacterial SH3 domain homologues M744_13215 SM00646 M744_13215 M744_13225 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. M744_13225 SM00245 tail specific protease M744_13230 SM00851 MGS-like domain M744_13230 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain M744_13320 SM00316 Ribosomal protein S1-like RNA-binding domain M744_13350 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor M744_13375 SM00822 M744_13375 M744_13400 SM00360 RNA recognition motif M744_13410 SM00474 3'-5' exonuclease M744_13445 SM00478 endonuclease III M744_13445 SM00525 M744_13445 M744_13480 SM00271 DnaJ molecular chaperone homology domain M744_13490 SM00100 Cyclic nucleotide-monophosphate binding domain M744_13495 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain M744_13495 SM01080 M744_13495 M744_13555 SM00487 DEAD-like helicases superfamily M744_13555 SM00490 helicase superfamily c-terminal domain M744_13590 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. M744_13590 SM00387 Histidine kinase-like ATPases M744_13590 SM00388 His Kinase A (phosphoacceptor) domain M744_13590 SM00448 cheY-homologous receiver domain M744_13620 SM00382 ATPases associated with a variety of cellular activities M744_13630 SM01192 M744_13630 M744_13630 SM01193 M744_13630 M744_13640 SM00382 ATPases associated with a variety of cellular activities M744_13640 SM01086 C-terminal, D2-small domain, of ClpB protein M744_13650 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. M744_13650 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. M744_13655 SM00649 Ribosomal protein L11/L12 M744_13715 SM00382 ATPases associated with a variety of cellular activities M744_13715 SM00393 Putative single-stranded nucleic acids-binding domain M744_13730 SM00382 ATPases associated with a variety of cellular activities M744_13750 SM00996 S-adenosyl-L-homocysteine hydrolase M744_13750 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain M744_13765 SM00450 Rhodanese Homology Domain M744_13775 SM00855 Phosphoglycerate mutase family M744_13785 SM00463 Small MutS-related domain M744_13785 SM00533 DNA-binding domain of DNA mismatch repair MUTS family M744_13785 SM00534 ATPase domain of DNA mismatch repair MUTS family M744_13840 SM00220 Serine/Threonine protein kinases, catalytic domain M744_13880 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain M744_14000 SM00382 ATPases associated with a variety of cellular activities M744_14035 SM01060 M744_14035 M744_14040 SM00947 Carbonic anhydrase M744_14085 SM00450 Rhodanese Homology Domain M744_14105 SM00470 ParB-like nuclease domain M744_14150 SM00448 cheY-homologous receiver domain M744_14150 SM00862 Transcriptional regulatory protein, C terminal M744_14155 SM00387 Histidine kinase-like ATPases M744_14155 SM00388 His Kinase A (phosphoacceptor) domain M744_14165 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. M744_14165 SM00421 helix_turn_helix, Lux Regulon M744_14175 SM00829 Enoylreductase M744_14250 SM00943 Bifunctional DNA primase/polymerase, N-terminal