SYNPCCN_0010 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SYNPCCN_0010 SM00292 breast cancer carboxy-terminal domain SYNPCCN_0010 SM00532 Ligase N family SYNPCCN_0014 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_0017 SM00342 helix_turn_helix, arabinose operon control protein SYNPCCN_0022 SM00342 helix_turn_helix, arabinose operon control protein SYNPCCN_0028 SM00698 Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases. SYNPCCN_0029 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_0030 SM00342 helix_turn_helix, arabinose operon control protein SYNPCCN_0035 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_0050 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_0072 SM00072 Guanylate kinase homologues. SYNPCCN_0073 SM00855 Phosphoglycerate mutase family SYNPCCN_0077 SM00460 Transglutaminase/protease-like homologues SYNPCCN_0079 SM00244 prohibitin homologues SYNPCCN_0080 SM00316 Ribosomal protein S1-like RNA-binding domain SYNPCCN_0083 SM00316 Ribosomal protein S1-like RNA-binding domain SYNPCCN_0083 SM00322 K homology RNA-binding domain SYNPCCN_0085 SM00919 Malic enzyme, NAD binding domain SYNPCCN_0085 SM01274 SYNPCCN_0085 SYNPCCN_0090 SM00650 Ribosomal RNA adenine dimethylases SYNPCCN_0091 SM00046 Diacylglycerol kinase catalytic domain (presumed) SYNPCCN_0110 SM00091 PAS domain SYNPCCN_0110 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SYNPCCN_0110 SM00387 Histidine kinase-like ATPases SYNPCCN_0110 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCN_0118 SM00322 K homology RNA-binding domain SYNPCCN_0122 SM00642 Alpha-amylase domain SYNPCCN_0138 SM00062 Bacterial periplasmic substrate-binding proteins SYNPCCN_0141 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_0152 SM00849 Metallo-beta-lactamase superfamily SYNPCCN_0152 SM00903 Flavin reductase like domain SYNPCCN_0154 SM00849 Metallo-beta-lactamase superfamily SYNPCCN_0154 SM00903 Flavin reductase like domain SYNPCCN_0155 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. SYNPCCN_0155 SM00245 tail specific protease SYNPCCN_0167 SM00387 Histidine kinase-like ATPases SYNPCCN_0169 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_0173 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_0181 SM00567 E-Z type HEAT repeats SYNPCCN_0185 SM00052 Putative diguanylate phosphodiesterase SYNPCCN_0185 SM00091 PAS domain SYNPCCN_0185 SM00240 Forkhead associated domain SYNPCCN_0185 SM00267 diguanylate cyclase SYNPCCN_0186 SM00052 Putative diguanylate phosphodiesterase SYNPCCN_0186 SM00240 Forkhead associated domain SYNPCCN_0186 SM00267 diguanylate cyclase SYNPCCN_0187 SM00052 Putative diguanylate phosphodiesterase SYNPCCN_0187 SM00240 Forkhead associated domain SYNPCCN_0187 SM00267 diguanylate cyclase SYNPCCN_0193 SM00244 prohibitin homologues SYNPCCN_0195 SM00331 Sigma factor PP2C-like phosphatases SYNPCCN_0195 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain SYNPCCN_0197 SM00961 Ribulose bisphosphate carboxylase, small chain SYNPCCN_0199 SM00877 SYNPCCN_0199 SYNPCCN_0200 SM00877 SYNPCCN_0200 SYNPCCN_0202 SM00248 ankyrin repeats SYNPCCN_0211 SM00327 von Willebrand factor (vWF) type A domain SYNPCCN_0211 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_0214 SM01002 Alanine dehydrogenase/PNT, C-terminal domain SYNPCCN_0214 SM01003 Alanine dehydrogenase/PNT, N-terminal domain SYNPCCN_0217 SM00460 Transglutaminase/protease-like homologues SYNPCCN_0219 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. SYNPCCN_0220 SM00421 helix_turn_helix, Lux Regulon SYNPCCN_0220 SM00448 cheY-homologous receiver domain SYNPCCN_0229 SM00267 diguanylate cyclase SYNPCCN_0229 SM00448 cheY-homologous receiver domain SYNPCCN_0230 SM00387 Histidine kinase-like ATPases SYNPCCN_0230 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCN_0230 SM00448 cheY-homologous receiver domain SYNPCCN_0241 SM00028 Tetratricopeptide repeats SYNPCCN_0242 SM00271 DnaJ molecular chaperone homology domain SYNPCCN_0246 SM00567 E-Z type HEAT repeats SYNPCCN_0248 SM00267 diguanylate cyclase SYNPCCN_0249 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SYNPCCN_0259 SM01329 SYNPCCN_0259 SYNPCCN_0272 SM00507 HNH nucleases SYNPCCN_0273 SM00984 UDP binding domain SYNPCCN_0282 SM00052 Putative diguanylate phosphodiesterase SYNPCCN_0282 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) SYNPCCN_0282 SM00091 PAS domain SYNPCCN_0282 SM00267 diguanylate cyclase SYNPCCN_0282 SM00448 cheY-homologous receiver domain SYNPCCN_0295 SM00480 DNA polymerase III beta subunit SYNPCCN_0306 SM01387 SYNPCCN_0306 SYNPCCN_0324 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_0374 SM00849 Metallo-beta-lactamase superfamily SYNPCCN_0377 SM00387 Histidine kinase-like ATPases SYNPCCN_0377 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCN_0377 SM00448 cheY-homologous receiver domain SYNPCCN_0379 SM00237 Domains in Na-Ca exchangers and integrin-beta4 SYNPCCN_0390 SM00448 cheY-homologous receiver domain SYNPCCN_0390 SM00862 Transcriptional regulatory protein, C terminal SYNPCCN_0392 SM00849 Metallo-beta-lactamase superfamily SYNPCCN_0393 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain SYNPCCN_0393 SM01080 SYNPCCN_0393 SYNPCCN_0398 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SYNPCCN_0398 SM00267 diguanylate cyclase SYNPCCN_0398 SM00448 cheY-homologous receiver domain SYNPCCN_0406 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_0406 SM00393 Putative single-stranded nucleic acids-binding domain SYNPCCN_0412 SM00363 S4 RNA-binding domain SYNPCCN_0413 SM00052 Putative diguanylate phosphodiesterase SYNPCCN_0414 SM00448 cheY-homologous receiver domain SYNPCCN_0423 SM00729 Elongator protein 3, MiaB family, Radical SAM SYNPCCN_0434 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_0449 SM00448 cheY-homologous receiver domain SYNPCCN_0450 SM00448 cheY-homologous receiver domain SYNPCCN_0451 SM00260 Two component signalling adaptor domain SYNPCCN_0452 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). SYNPCCN_0452 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SYNPCCN_0455 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SYNPCCN_0455 SM00267 diguanylate cyclase SYNPCCN_0457 SM00271 DnaJ molecular chaperone homology domain SYNPCCN_0469 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) SYNPCCN_0469 SM00091 PAS domain SYNPCCN_0469 SM00387 Histidine kinase-like ATPases SYNPCCN_0469 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCN_0474 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_0476 SM00912 haemagglutination activity domain SYNPCCN_0479 SM01230 SYNPCCN_0479 SYNPCCN_0480 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SYNPCCN_0480 SM00073 Histidine Phosphotransfer domain SYNPCCN_0480 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) SYNPCCN_0480 SM00091 PAS domain SYNPCCN_0480 SM00387 Histidine kinase-like ATPases SYNPCCN_0480 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCN_0480 SM00448 cheY-homologous receiver domain SYNPCCN_0480 SM01079 SYNPCCN_0480 SYNPCCN_0481 SM00267 diguanylate cyclase SYNPCCN_0481 SM00448 cheY-homologous receiver domain SYNPCCN_0494 SM00244 prohibitin homologues SYNPCCN_0497 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain SYNPCCN_0500 SM00563 Phosphate acyltransferases SYNPCCN_0514 SM00861 Transketolase, pyrimidine binding domain SYNPCCN_0521 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase SYNPCCN_0527 SM00434 DNA Topoisomerase IV SYNPCCN_0528 SM00448 cheY-homologous receiver domain SYNPCCN_0536 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_0539 SM00112 Cadherin repeats. SYNPCCN_0541 SM00028 Tetratricopeptide repeats SYNPCCN_0547 SM00271 DnaJ molecular chaperone homology domain SYNPCCN_0555 SM00421 helix_turn_helix, Lux Regulon SYNPCCN_0555 SM00448 cheY-homologous receiver domain SYNPCCN_0556 SM00646 SYNPCCN_0556 SYNPCCN_0578 SM00729 Elongator protein 3, MiaB family, Radical SAM SYNPCCN_0589 SM00829 Enoylreductase SYNPCCN_0590 SM00108 Bulb-type mannose-specific lectin SYNPCCN_0590 SM00191 Integrin alpha (beta-propellor repeats). SYNPCCN_0590 SM00237 Domains in Na-Ca exchangers and integrin-beta4 SYNPCCN_0590 SM00560 LamG-like jellyroll fold domain SYNPCCN_0591 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_0601 SM00448 cheY-homologous receiver domain SYNPCCN_0619 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SYNPCCN_0619 SM00091 PAS domain SYNPCCN_0623 SM00073 Histidine Phosphotransfer domain SYNPCCN_0623 SM00260 Two component signalling adaptor domain SYNPCCN_0623 SM00387 Histidine kinase-like ATPases SYNPCCN_0623 SM00448 cheY-homologous receiver domain SYNPCCN_0623 SM01231 SYNPCCN_0623 SYNPCCN_0624 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). SYNPCCN_0624 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SYNPCCN_0625 SM00260 Two component signalling adaptor domain SYNPCCN_0626 SM00448 cheY-homologous receiver domain SYNPCCN_0627 SM00448 cheY-homologous receiver domain SYNPCCN_0628 SM00955 SYNPCCN_0628 SYNPCCN_0630 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_0632 SM00899 SYNPCCN_0632 SYNPCCN_0635 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SYNPCCN_0635 SM00091 PAS domain SYNPCCN_0635 SM00387 Histidine kinase-like ATPases SYNPCCN_0635 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCN_0642 SM00729 Elongator protein 3, MiaB family, Radical SAM SYNPCCN_0647 SM00292 breast cancer carboxy-terminal domain SYNPCCN_0653 SM01094 CpcD/allophycocyanin linker domain SYNPCCN_0654 SM01094 CpcD/allophycocyanin linker domain SYNPCCN_0655 SM01094 CpcD/allophycocyanin linker domain SYNPCCN_0660 SM00220 Serine/Threonine protein kinases, catalytic domain SYNPCCN_0669 SM00240 Forkhead associated domain SYNPCCN_0671 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_0684 SM00327 von Willebrand factor (vWF) type A domain SYNPCCN_0685 SM00100 Cyclic nucleotide-monophosphate binding domain SYNPCCN_0685 SM00419 helix_turn_helix, cAMP Regulatory protein SYNPCCN_0690 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_0693 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. SYNPCCN_0694 SM00448 cheY-homologous receiver domain SYNPCCN_0696 SM00729 Elongator protein 3, MiaB family, Radical SAM SYNPCCN_0702 SM00670 Large family of predicted nucleotide-binding domains SYNPCCN_0705 SM00316 Ribosomal protein S1-like RNA-binding domain SYNPCCN_0705 SM00357 Cold shock protein domain SYNPCCN_0705 SM00955 SYNPCCN_0705 SYNPCCN_0707 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SYNPCCN_0707 SM00331 Sigma factor PP2C-like phosphatases SYNPCCN_0711 SM00729 Elongator protein 3, MiaB family, Radical SAM SYNPCCN_0717 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_0723 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SYNPCCN_0724 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SYNPCCN_0724 SM00267 diguanylate cyclase SYNPCCN_0725 SM00831 Cation transporter/ATPase, N-terminus SYNPCCN_0729 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SYNPCCN_0729 SM00387 Histidine kinase-like ATPases SYNPCCN_0729 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCN_0731 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_0735 SM00861 Transketolase, pyrimidine binding domain SYNPCCN_0736 SM00825 Beta-ketoacyl synthase SYNPCCN_0743 SM00788 Adenylosuccinate synthetase SYNPCCN_0750 SM00662 RNA polymerases D SYNPCCN_0754 SM00316 Ribosomal protein S1-like RNA-binding domain SYNPCCN_0763 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. SYNPCCN_0764 SM01374 SYNPCCN_0764 SYNPCCN_0768 SM00322 K homology RNA-binding domain SYNPCCN_0771 SM01382 SYNPCCN_0771 SYNPCCN_0771 SM01383 SYNPCCN_0771 SYNPCCN_0784 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_0793 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SYNPCCN_0793 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) SYNPCCN_0793 SM00091 PAS domain SYNPCCN_0793 SM00387 Histidine kinase-like ATPases SYNPCCN_0793 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCN_0796 SM00968 SMC proteins Flexible Hinge Domain SYNPCCN_0800 SM00028 Tetratricopeptide repeats SYNPCCN_0805 SM00853 MutL C terminal dimerisation domain SYNPCCN_0805 SM01340 SYNPCCN_0805 SYNPCCN_0810 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. SYNPCCN_0815 SM01007 Class II Aldolase and Adducin N-terminal domain SYNPCCN_0819 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SYNPCCN_0819 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) SYNPCCN_0819 SM00091 PAS domain SYNPCCN_0819 SM00387 Histidine kinase-like ATPases SYNPCCN_0820 SM00342 helix_turn_helix, arabinose operon control protein SYNPCCN_0820 SM00448 cheY-homologous receiver domain SYNPCCN_0821 SM00448 cheY-homologous receiver domain SYNPCCN_0824 SM00116 Domain in cystathionine beta-synthase and other proteins. SYNPCCN_0824 SM00924 MgtE intracellular N domain SYNPCCN_0835 SM00883 Chaperonin 10 Kd subunit SYNPCCN_0837 SM00052 Putative diguanylate phosphodiesterase SYNPCCN_0837 SM00062 Bacterial periplasmic substrate-binding proteins SYNPCCN_0837 SM00267 diguanylate cyclase SYNPCCN_0844 SM00649 Ribosomal protein L11/L12 SYNPCCN_0845 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. SYNPCCN_0845 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. SYNPCCN_0857 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. SYNPCCN_0865 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_0869 SM00448 cheY-homologous receiver domain SYNPCCN_0869 SM00862 Transcriptional regulatory protein, C terminal SYNPCCN_0870 SM00861 Transketolase, pyrimidine binding domain SYNPCCN_0871 SM00877 SYNPCCN_0871 SYNPCCN_0872 SM00877 SYNPCCN_0872 SYNPCCN_0883 SM00411 bacterial (prokaryotic) histone like domain SYNPCCN_0886 SM00487 DEAD-like helicases superfamily SYNPCCN_0886 SM00490 helicase superfamily c-terminal domain SYNPCCN_0902 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_0913 SM00926 Molybdopterin oxidoreductase Fe4S4 domain SYNPCCN_0914 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_0915 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_0919 SM00855 Phosphoglycerate mutase family SYNPCCN_0921 SM00864 Tubulin/FtsZ family, GTPase domain SYNPCCN_0921 SM00865 Tubulin/FtsZ family, C-terminal domain SYNPCCN_0923 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. SYNPCCN_0923 SM00245 tail specific protease SYNPCCN_0927 SM00988 UreE urease accessory protein, N-terminal domain SYNPCCN_0933 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_0934 SM00220 Serine/Threonine protein kinases, catalytic domain SYNPCCN_0961 SM01002 Alanine dehydrogenase/PNT, C-terminal domain SYNPCCN_0961 SM01003 Alanine dehydrogenase/PNT, N-terminal domain SYNPCCN_0972 SM00305 Hint (Hedgehog/Intein) domain C-terminal region SYNPCCN_0972 SM00306 Hint (Hedgehog/Intein) domain N-terminal region SYNPCCN_0972 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_0975 SM00835 Cupin SYNPCCN_0980 SM00220 Serine/Threonine protein kinases, catalytic domain SYNPCCN_0981 SM00880 SYNPCCN_0981 SYNPCCN_0984 SM00387 Histidine kinase-like ATPases SYNPCCN_0984 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCN_0995 SM00316 Ribosomal protein S1-like RNA-binding domain SYNPCCN_0998 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_1003 SM00729 Elongator protein 3, MiaB family, Radical SAM SYNPCCN_1003 SM00876 Biotin and Thiamin Synthesis associated domain SYNPCCN_1009 SM00062 Bacterial periplasmic substrate-binding proteins SYNPCCN_1009 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. SYNPCCN_1019 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SYNPCCN_1022 SM00360 RNA recognition motif SYNPCCN_1024 SM00257 Lysin motif SYNPCCN_1034 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SYNPCCN_1037 SM00729 Elongator protein 3, MiaB family, Radical SAM SYNPCCN_1039 SM00822 SYNPCCN_1039 SYNPCCN_1045 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SYNPCCN_1045 SM00465 GIY-YIG type nucleases (URI domain) SYNPCCN_1046 SM00287 Bacterial SH3 domain homologues SYNPCCN_1046 SM00646 SYNPCCN_1046 SYNPCCN_1047 SM00232 JAB/MPN domain SYNPCCN_1059 SM00191 Integrin alpha (beta-propellor repeats). SYNPCCN_1059 SM00237 Domains in Na-Ca exchangers and integrin-beta4 SYNPCCN_1063 SM00320 WD40 repeats SYNPCCN_1064 SM00320 WD40 repeats SYNPCCN_1077 SM00642 Alpha-amylase domain SYNPCCN_1079 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SYNPCCN_1079 SM00331 Sigma factor PP2C-like phosphatases SYNPCCN_1086 SM01133 SYNPCCN_1086 SYNPCCN_1093 SM00463 Small MutS-related domain SYNPCCN_1093 SM00533 DNA-binding domain of DNA mismatch repair MUTS family SYNPCCN_1093 SM00534 ATPase domain of DNA mismatch repair MUTS family SYNPCCN_1094 SM00331 Sigma factor PP2C-like phosphatases SYNPCCN_1094 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain SYNPCCN_1106 SM00567 E-Z type HEAT repeats SYNPCCN_1111 SM00062 Bacterial periplasmic substrate-binding proteins SYNPCCN_1118 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_1119 SM00904 Riboflavin kinase SYNPCCN_1122 SM01093 SYNPCCN_1122 SYNPCCN_1125 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SYNPCCN_1141 SM00507 HNH nucleases SYNPCCN_1143 SM00305 Hint (Hedgehog/Intein) domain C-terminal region SYNPCCN_1143 SM00306 Hint (Hedgehog/Intein) domain N-terminal region SYNPCCN_1143 SM00387 Histidine kinase-like ATPases SYNPCCN_1143 SM00433 TopoisomeraseII SYNPCCN_1155 SM00421 helix_turn_helix, Lux Regulon SYNPCCN_1155 SM00448 cheY-homologous receiver domain SYNPCCN_1156 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SYNPCCN_1156 SM00387 Histidine kinase-like ATPases SYNPCCN_1156 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCN_1183 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SYNPCCN_1183 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) SYNPCCN_1183 SM00091 PAS domain SYNPCCN_1183 SM00267 diguanylate cyclase SYNPCCN_1184 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. SYNPCCN_1185 SM00478 endonuclease III SYNPCCN_1185 SM00525 SYNPCCN_1185 SYNPCCN_1190 SM00028 Tetratricopeptide repeats SYNPCCN_1192 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_1195 SM00448 cheY-homologous receiver domain SYNPCCN_1195 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SYNPCCN_1196 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_1207 SM00646 SYNPCCN_1207 SYNPCCN_1224 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_1224 SM00760 Bacterial dnaA protein helix-turn-helix domain SYNPCCN_1232 SM00642 Alpha-amylase domain SYNPCCN_1233 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_1236 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family SYNPCCN_1237 SM00028 Tetratricopeptide repeats SYNPCCN_1244 SM00533 DNA-binding domain of DNA mismatch repair MUTS family SYNPCCN_1244 SM00534 ATPase domain of DNA mismatch repair MUTS family SYNPCCN_1249 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain SYNPCCN_1263 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_1274 SM00062 Bacterial periplasmic substrate-binding proteins SYNPCCN_1274 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. SYNPCCN_1276 SM00849 Metallo-beta-lactamase superfamily SYNPCCN_1278 SM00450 Rhodanese Homology Domain SYNPCCN_1281 SM00345 helix_turn_helix gluconate operon transcriptional repressor SYNPCCN_1285 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor SYNPCCN_1287 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain SYNPCCN_1287 SM00437 Bacterial DNA topoisomerase I DNA-binding domain SYNPCCN_1287 SM00493 SYNPCCN_1287 SYNPCCN_1288 SM00930 SYNPCCN_1288 SYNPCCN_1289 SM00563 Phosphate acyltransferases SYNPCCN_1299 SM01094 CpcD/allophycocyanin linker domain SYNPCCN_1303 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain SYNPCCN_1303 SM00240 Forkhead associated domain SYNPCCN_1306 SM00822 SYNPCCN_1306 SYNPCCN_1308 SM00073 Histidine Phosphotransfer domain SYNPCCN_1308 SM00091 PAS domain SYNPCCN_1308 SM00387 Histidine kinase-like ATPases SYNPCCN_1308 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCN_1308 SM00448 cheY-homologous receiver domain SYNPCCN_1320 SM00831 Cation transporter/ATPase, N-terminus SYNPCCN_1327 SM00460 Transglutaminase/protease-like homologues SYNPCCN_1335 SM01240 SYNPCCN_1335 SYNPCCN_1341 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_1344 SM01248 SYNPCCN_1344 SYNPCCN_1345 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_1349 SM00421 helix_turn_helix, Lux Regulon SYNPCCN_1349 SM00448 cheY-homologous receiver domain SYNPCCN_1350 SM00387 Histidine kinase-like ATPases SYNPCCN_1350 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCN_1385 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_1389 SM00631 SYNPCCN_1389 SYNPCCN_1392 SM00507 HNH nucleases SYNPCCN_1415 SM00073 Histidine Phosphotransfer domain SYNPCCN_1415 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) SYNPCCN_1415 SM00091 PAS domain SYNPCCN_1415 SM00387 Histidine kinase-like ATPases SYNPCCN_1415 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCN_1415 SM00448 cheY-homologous receiver domain SYNPCCN_1416 SM00387 Histidine kinase-like ATPases SYNPCCN_1416 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCN_1416 SM00448 cheY-homologous receiver domain SYNPCCN_1417 SM00448 cheY-homologous receiver domain SYNPCCN_1417 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SYNPCCN_1419 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_1419 SM00962 SRP54-type protein, GTPase domain SYNPCCN_1419 SM00963 SRP54-type protein, helical bundle domain SYNPCCN_1421 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SYNPCCN_1421 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) SYNPCCN_1421 SM00091 PAS domain SYNPCCN_1421 SM00387 Histidine kinase-like ATPases SYNPCCN_1421 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCN_1421 SM00448 cheY-homologous receiver domain SYNPCCN_1422 SM01207 SYNPCCN_1422 SYNPCCN_1429 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. SYNPCCN_1434 SM00100 Cyclic nucleotide-monophosphate binding domain SYNPCCN_1434 SM00419 helix_turn_helix, cAMP Regulatory protein SYNPCCN_1451 SM01329 SYNPCCN_1451 SYNPCCN_1466 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_1490 SM01004 Delta-aminolevulinic acid dehydratase SYNPCCN_1499 SM00387 Histidine kinase-like ATPases SYNPCCN_1499 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCN_1499 SM00448 cheY-homologous receiver domain SYNPCCN_1502 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SYNPCCN_1502 SM00954 Region found in RelA / SpoT proteins SYNPCCN_1503 SM00996 S-adenosyl-L-homocysteine hydrolase SYNPCCN_1503 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain SYNPCCN_1505 SM00670 Large family of predicted nucleotide-binding domains SYNPCCN_1506 SM00460 Transglutaminase/protease-like homologues SYNPCCN_1509 SM00387 Histidine kinase-like ATPases SYNPCCN_1509 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCN_1509 SM00448 cheY-homologous receiver domain SYNPCCN_1510 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SYNPCCN_1510 SM00387 Histidine kinase-like ATPases SYNPCCN_1510 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCN_1510 SM00448 cheY-homologous receiver domain SYNPCCN_1511 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_1514 SM00825 Beta-ketoacyl synthase SYNPCCN_1519 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region SYNPCCN_1521 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region SYNPCCN_1541 SM00244 prohibitin homologues SYNPCCN_1562 SM00831 Cation transporter/ATPase, N-terminus SYNPCCN_1563 SM00028 Tetratricopeptide repeats SYNPCCN_1576 SM00327 von Willebrand factor (vWF) type A domain SYNPCCN_1583 SM00116 Domain in cystathionine beta-synthase and other proteins. SYNPCCN_1584 SM00363 S4 RNA-binding domain SYNPCCN_1586 SM00028 Tetratricopeptide repeats SYNPCCN_1590 SM00947 Carbonic anhydrase SYNPCCN_1599 SM00729 Elongator protein 3, MiaB family, Radical SAM SYNPCCN_1600 SM00028 Tetratricopeptide repeats SYNPCCN_1607 SM00479 SYNPCCN_1607 SYNPCCN_1611 SM00052 Putative diguanylate phosphodiesterase SYNPCCN_1611 SM00240 Forkhead associated domain SYNPCCN_1611 SM00267 diguanylate cyclase SYNPCCN_1618 SM00028 Tetratricopeptide repeats SYNPCCN_1621 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SYNPCCN_1621 SM00387 Histidine kinase-like ATPases SYNPCCN_1621 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCN_1621 SM00448 cheY-homologous receiver domain SYNPCCN_1625 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SYNPCCN_1625 SM00387 Histidine kinase-like ATPases SYNPCCN_1625 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCN_1627 SM00670 Large family of predicted nucleotide-binding domains SYNPCCN_1630 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_1633 SM00028 Tetratricopeptide repeats SYNPCCN_1636 SM00448 cheY-homologous receiver domain SYNPCCN_1637 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_1642 SM00729 Elongator protein 3, MiaB family, Radical SAM SYNPCCN_1647 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SYNPCCN_1647 SM00387 Histidine kinase-like ATPases SYNPCCN_1647 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCN_1648 SM00448 cheY-homologous receiver domain SYNPCCN_1649 SM00331 Sigma factor PP2C-like phosphatases SYNPCCN_1649 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCN_1649 SM00448 cheY-homologous receiver domain SYNPCCN_1650 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_1652 SM00316 Ribosomal protein S1-like RNA-binding domain SYNPCCN_1653 SM00400 zinc finger SYNPCCN_1653 SM00493 SYNPCCN_1653 SYNPCCN_1669 SM00393 Putative single-stranded nucleic acids-binding domain SYNPCCN_1670 SM00028 Tetratricopeptide repeats SYNPCCN_1670 SM00271 DnaJ molecular chaperone homology domain SYNPCCN_1684 SM00100 Cyclic nucleotide-monophosphate binding domain SYNPCCN_1684 SM00419 helix_turn_helix, cAMP Regulatory protein SYNPCCN_1689 SM00100 Cyclic nucleotide-monophosphate binding domain SYNPCCN_1689 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_1690 SM00663 RNA polymerase I subunit A N-terminus SYNPCCN_1712 SM00091 PAS domain SYNPCCN_1712 SM00267 diguanylate cyclase SYNPCCN_1713 SM00100 Cyclic nucleotide-monophosphate binding domain SYNPCCN_1714 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCN_1725 SM00100 Cyclic nucleotide-monophosphate binding domain SYNPCCN_1730 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_1730 SM00962 SRP54-type protein, GTPase domain SYNPCCN_1730 SM00963 SRP54-type protein, helical bundle domain SYNPCCN_1733 SM00845 GatB domain SYNPCCN_1741 SM00062 Bacterial periplasmic substrate-binding proteins SYNPCCN_1744 SM01403 SYNPCCN_1744 SYNPCCN_1746 SM00838 Elongation factor G C-terminus SYNPCCN_1746 SM00889 Elongation factor G, domain IV SYNPCCN_1750 SM01209 SYNPCCN_1750 SYNPCCN_1750 SM01210 SYNPCCN_1750 SYNPCCN_1779 SM00967 RNA 2'-O ribose methyltransferase substrate binding SYNPCCN_1787 SM00917 LeuA allosteric (dimerisation) domain SYNPCCN_1800 SM00240 Forkhead associated domain SYNPCCN_1802 SM00567 E-Z type HEAT repeats SYNPCCN_1804 SM00881 CoA binding domain SYNPCCN_1806 SM00387 Histidine kinase-like ATPases SYNPCCN_1806 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCN_1806 SM00448 cheY-homologous receiver domain SYNPCCN_1808 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain SYNPCCN_1808 SM01232 SYNPCCN_1808 SYNPCCN_1811 SM00052 Putative diguanylate phosphodiesterase SYNPCCN_1812 SM00448 cheY-homologous receiver domain SYNPCCN_1813 SM01034 Sensors of blue-light using FAD SYNPCCN_1814 SM00873 B3/4 domain SYNPCCN_1814 SM00874 tRNA synthetase B5 domain SYNPCCN_1814 SM00896 Ferredoxin-fold anticodon binding domain SYNPCCN_1815 SM00220 Serine/Threonine protein kinases, catalytic domain SYNPCCN_1816 SM00421 helix_turn_helix, Lux Regulon SYNPCCN_1816 SM00448 cheY-homologous receiver domain SYNPCCN_1832 SM00226 Low molecular weight phosphatase family SYNPCCN_1833 SM00448 cheY-homologous receiver domain SYNPCCN_1833 SM00862 Transcriptional regulatory protein, C terminal SYNPCCN_1836 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_1838 SM00363 S4 RNA-binding domain SYNPCCN_1840 SM00028 Tetratricopeptide repeats SYNPCCN_1841 SM00271 DnaJ molecular chaperone homology domain SYNPCCN_1846 SM00535 Ribonuclease III family SYNPCCN_1847 SM00967 RNA 2'-O ribose methyltransferase substrate binding SYNPCCN_1849 SM00840 SYNPCCN_1849 SYNPCCN_1861 SM00905 Dihydroneopterin aldolase SYNPCCN_1863 SM00450 Rhodanese Homology Domain SYNPCCN_1865 SM00363 S4 RNA-binding domain SYNPCCN_1880 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_1880 SM01086 C-terminal, D2-small domain, of ClpB protein SYNPCCN_1883 SM01094 CpcD/allophycocyanin linker domain SYNPCCN_1885 SM00028 Tetratricopeptide repeats SYNPCCN_1887 SM00358 Double-stranded RNA binding motif SYNPCCN_1887 SM00535 Ribonuclease III family SYNPCCN_1893 SM00849 Metallo-beta-lactamase superfamily SYNPCCN_1893 SM00903 Flavin reductase like domain SYNPCCN_1896 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. SYNPCCN_1905 SM00729 Elongator protein 3, MiaB family, Radical SAM SYNPCCN_1908 SM00998 Adenylosuccinate lyase C-terminus SYNPCCN_1915 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_1921 SM00487 DEAD-like helicases superfamily SYNPCCN_1921 SM00490 helicase superfamily c-terminal domain SYNPCCN_1924 SM00052 Putative diguanylate phosphodiesterase SYNPCCN_1924 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SYNPCCN_1924 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) SYNPCCN_1924 SM00091 PAS domain SYNPCCN_1924 SM00267 diguanylate cyclase SYNPCCN_1924 SM01079 SYNPCCN_1924 SYNPCCN_1934 SM01091 Transporter associated domain SYNPCCN_1937 SM01230 SYNPCCN_1937 SYNPCCN_1946 SM00507 HNH nucleases SYNPCCN_1950 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain SYNPCCN_1960 SM00938 Nitrogen regulatory protein P-II SYNPCCN_1968 SM00191 Integrin alpha (beta-propellor repeats). SYNPCCN_1968 SM00237 Domains in Na-Ca exchangers and integrin-beta4 SYNPCCN_1968 SM00560 LamG-like jellyroll fold domain SYNPCCN_1970 SM00320 WD40 repeats SYNPCCN_1971 SM00989 SYNPCCN_1971 SYNPCCN_1974 SM00989 SYNPCCN_1974 SYNPCCN_1978 SM00028 Tetratricopeptide repeats SYNPCCN_1979 SM00220 Serine/Threonine protein kinases, catalytic domain SYNPCCN_1987 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_1987 SM01086 C-terminal, D2-small domain, of ClpB protein SYNPCCN_1991 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_1995 SM01011 Aminopeptidase P, N-terminal domain SYNPCCN_2004 SM00937 SYNPCCN_2004 SYNPCCN_2005 SM00116 Domain in cystathionine beta-synthase and other proteins. SYNPCCN_2023 SM00562 SYNPCCN_2023 SYNPCCN_2029 SM00563 Phosphate acyltransferases SYNPCCN_2040 SM00235 Zinc-dependent metalloprotease SYNPCCN_2044 SM00240 Forkhead associated domain SYNPCCN_2048 SM00257 Lysin motif SYNPCCN_2054 SM00729 Elongator protein 3, MiaB family, Radical SAM SYNPCCN_2057 SM00260 Two component signalling adaptor domain SYNPCCN_2057 SM00387 Histidine kinase-like ATPases SYNPCCN_2057 SM00448 cheY-homologous receiver domain SYNPCCN_2057 SM01231 SYNPCCN_2057 SYNPCCN_2058 SM00872 Alpha mannosidase, middle domain SYNPCCN_2065 SM00226 Low molecular weight phosphatase family SYNPCCN_2070 SM00421 helix_turn_helix, Lux Regulon SYNPCCN_2079 SM00933 SYNPCCN_2079 SYNPCCN_2083 SM00877 SYNPCCN_2083 SYNPCCN_2084 SM00028 Tetratricopeptide repeats SYNPCCN_2085 SM00116 Domain in cystathionine beta-synthase and other proteins. SYNPCCN_2086 SM00857 Resolvase, N terminal domain SYNPCCN_2090 SM00062 Bacterial periplasmic substrate-binding proteins SYNPCCN_2095 SM00271 DnaJ molecular chaperone homology domain SYNPCCN_2099 SM00320 WD40 repeats SYNPCCN_2108 SM00642 Alpha-amylase domain SYNPCCN_2114 SM00917 LeuA allosteric (dimerisation) domain SYNPCCN_2115 SM00052 Putative diguanylate phosphodiesterase SYNPCCN_2115 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SYNPCCN_2115 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) SYNPCCN_2115 SM00091 PAS domain SYNPCCN_2115 SM00267 diguanylate cyclase SYNPCCN_2117 SM00363 S4 RNA-binding domain SYNPCCN_2122 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins SYNPCCN_2125 SM00091 PAS domain SYNPCCN_2125 SM00387 Histidine kinase-like ATPases SYNPCCN_2125 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCN_2129 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_2136 SM00822 SYNPCCN_2136 SYNPCCN_2139 SM01350 SYNPCCN_2139 SYNPCCN_2158 SM00450 Rhodanese Homology Domain SYNPCCN_2160 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_2164 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_2176 SM00387 Histidine kinase-like ATPases SYNPCCN_2176 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCN_2176 SM01248 SYNPCCN_2176 SYNPCCN_2177 SM00909 Sporulation and spore germination SYNPCCN_2180 SM00062 Bacterial periplasmic substrate-binding proteins SYNPCCN_2186 SM00358 Double-stranded RNA binding motif SYNPCCN_2186 SM00535 Ribonuclease III family SYNPCCN_2190 SM00474 3'-5' exonuclease SYNPCCN_2200 SM00028 Tetratricopeptide repeats SYNPCCN_2201 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_2213 SM00903 Flavin reductase like domain SYNPCCN_2215 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_2215 SM01086 C-terminal, D2-small domain, of ClpB protein SYNPCCN_2219 SM00925 MltA specific insert domain SYNPCCN_2222 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. SYNPCCN_2222 SM00245 tail specific protease SYNPCCN_2225 SM00961 Ribulose bisphosphate carboxylase, small chain SYNPCCN_2240 SM00487 DEAD-like helicases superfamily SYNPCCN_2240 SM00490 helicase superfamily c-terminal domain SYNPCCN_2256 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) SYNPCCN_2256 SM00091 PAS domain SYNPCCN_2256 SM00387 Histidine kinase-like ATPases SYNPCCN_2256 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCN_2256 SM00448 cheY-homologous receiver domain SYNPCCN_2257 SM01228 SYNPCCN_2257 SYNPCCN_2264 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_2265 SM00464 Found in ATP-dependent protease La (LON) SYNPCCN_2269 SM00478 endonuclease III SYNPCCN_2273 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. SYNPCCN_2275 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_2283 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain SYNPCCN_2285 SM00841 Elongation factor P, C-terminal SYNPCCN_2285 SM01185 SYNPCCN_2285 SYNPCCN_2287 SM00877 SYNPCCN_2287 SYNPCCN_2288 SM00670 Large family of predicted nucleotide-binding domains SYNPCCN_2293 SM00320 WD40 repeats SYNPCCN_2297 SM00855 Phosphoglycerate mutase family SYNPCCN_2301 SM00849 Metallo-beta-lactamase superfamily SYNPCCN_2302 SM00530 Helix-turn-helix XRE-family like proteins SYNPCCN_2305 SM00947 Carbonic anhydrase SYNPCCN_2307 SM00567 E-Z type HEAT repeats SYNPCCN_2316 SM00062 Bacterial periplasmic substrate-binding proteins SYNPCCN_2328 SM00981 SYNPCCN_2328 SYNPCCN_2333 SM00878 Biotin carboxylase C-terminal domain SYNPCCN_2337 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_2339 SM00363 S4 RNA-binding domain SYNPCCN_2339 SM01390 SYNPCCN_2339 SYNPCCN_2342 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SYNPCCN_2342 SM00091 PAS domain SYNPCCN_2342 SM00387 Histidine kinase-like ATPases SYNPCCN_2342 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCN_2343 SM00448 cheY-homologous receiver domain SYNPCCN_2344 SM00487 DEAD-like helicases superfamily SYNPCCN_2344 SM00490 helicase superfamily c-terminal domain SYNPCCN_2349 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_2352 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SYNPCCN_2352 SM00387 Histidine kinase-like ATPases SYNPCCN_2352 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCN_2353 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) SYNPCCN_2353 SM00091 PAS domain SYNPCCN_2372 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_2373 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_2381 SM00849 Metallo-beta-lactamase superfamily SYNPCCN_2382 SM00957 SecA DEAD-like domain SYNPCCN_2382 SM00958 SecA preprotein cross-linking domain SYNPCCN_2385 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_2394 SM00387 Histidine kinase-like ATPases SYNPCCN_2394 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCN_2402 SM00331 Sigma factor PP2C-like phosphatases SYNPCCN_2402 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain SYNPCCN_2403 SM00327 von Willebrand factor (vWF) type A domain SYNPCCN_2408 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SYNPCCN_2410 SM00448 cheY-homologous receiver domain SYNPCCN_2410 SM00862 Transcriptional regulatory protein, C terminal SYNPCCN_2411 SM00855 Phosphoglycerate mutase family SYNPCCN_2415 SM00434 DNA Topoisomerase IV SYNPCCN_2417 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_2430 SM00487 DEAD-like helicases superfamily SYNPCCN_2430 SM00490 helicase superfamily c-terminal domain SYNPCCN_2430 SM00982 SYNPCCN_2430 SYNPCCN_2430 SM01058 CarD-like/TRCF domain SYNPCCN_2433 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_2438 SM00851 MGS-like domain SYNPCCN_2438 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SYNPCCN_2442 SM00852 Probable molybdopterin binding domain SYNPCCN_2446 SM00450 Rhodanese Homology Domain SYNPCCN_2447 SM00360 RNA recognition motif SYNPCCN_2451 SM00155 Phospholipase D. Active site motifs. SYNPCCN_2451 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SYNPCCN_2452 SM00959 Rho termination factor, N-terminal domain SYNPCCN_2457 SM00028 Tetratricopeptide repeats SYNPCCN_2469 SM00387 Histidine kinase-like ATPases SYNPCCN_2469 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCN_2472 SM01234 SYNPCCN_2472 SYNPCCN_2473 SM01018 B12 binding domain SYNPCCN_2479 SM00028 Tetratricopeptide repeats SYNPCCN_2482 SM00637 SYNPCCN_2482 SYNPCCN_2484 SM01116 SYNPCCN_2484 SYNPCCN_2485 SM00852 Probable molybdopterin binding domain SYNPCCN_2486 SM00729 Elongator protein 3, MiaB family, Radical SAM SYNPCCN_2491 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_2492 SM00729 Elongator protein 3, MiaB family, Radical SAM SYNPCCN_2517 SM00756 SYNPCCN_2517 SYNPCCN_2518 SM00849 Metallo-beta-lactamase superfamily SYNPCCN_2518 SM00903 Flavin reductase like domain SYNPCCN_2519 SM00481 DNA polymerase alpha chain like domain SYNPCCN_2523 SM00014 Acid phosphatase homologues SYNPCCN_2546 SM01005 Alanine racemase, C-terminal domain SYNPCCN_2547 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) SYNPCCN_2547 SM00091 PAS domain SYNPCCN_2547 SM00267 diguanylate cyclase SYNPCCN_2547 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SYNPCCN_2550 SM00732 Likely ribonuclease with RNase H fold. SYNPCCN_2552 SM00305 Hint (Hedgehog/Intein) domain C-terminal region SYNPCCN_2552 SM00306 Hint (Hedgehog/Intein) domain N-terminal region SYNPCCN_2556 SM00838 Elongation factor G C-terminus SYNPCCN_2556 SM00889 Elongation factor G, domain IV SYNPCCN_2563 SM00052 Putative diguanylate phosphodiesterase SYNPCCN_2563 SM00100 Cyclic nucleotide-monophosphate binding domain SYNPCCN_2572 SM00052 Putative diguanylate phosphodiesterase SYNPCCN_2572 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SYNPCCN_2572 SM00267 diguanylate cyclase SYNPCCN_2576 SM00073 Histidine Phosphotransfer domain SYNPCCN_2590 SM00448 cheY-homologous receiver domain SYNPCCN_2590 SM00862 Transcriptional regulatory protein, C terminal SYNPCCN_2591 SM00729 Elongator protein 3, MiaB family, Radical SAM SYNPCCN_2592 SM00487 DEAD-like helicases superfamily SYNPCCN_2592 SM00490 helicase superfamily c-terminal domain SYNPCCN_2593 SM00859 Semialdehyde dehydrogenase, NAD binding domain SYNPCCN_2595 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain SYNPCCN_2602 SM00271 DnaJ molecular chaperone homology domain SYNPCCN_2606 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_2610 SM01248 SYNPCCN_2610 SYNPCCN_2611 SM00448 cheY-homologous receiver domain SYNPCCN_2612 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_2621 SM00100 Cyclic nucleotide-monophosphate binding domain SYNPCCN_2630 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) SYNPCCN_2630 SM00387 Histidine kinase-like ATPases SYNPCCN_2630 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCN_2635 SM01211 SYNPCCN_2635 SYNPCCN_2640 SM01400 SYNPCCN_2640 SYNPCCN_2646 SM00419 helix_turn_helix, cAMP Regulatory protein SYNPCCN_2648 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_2665 SM00028 Tetratricopeptide repeats SYNPCCN_2670 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SYNPCCN_2671 SM00327 von Willebrand factor (vWF) type A domain SYNPCCN_2683 SM00387 Histidine kinase-like ATPases SYNPCCN_2683 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCN_2687 SM00331 Sigma factor PP2C-like phosphatases SYNPCCN_2688 SM00448 cheY-homologous receiver domain SYNPCCN_2688 SM00862 Transcriptional regulatory protein, C terminal SYNPCCN_2700 SM00240 Forkhead associated domain SYNPCCN_2701 SM01059 Chloramphenicol acetyltransferase SYNPCCN_2704 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SYNPCCN_2704 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) SYNPCCN_2704 SM00091 PAS domain SYNPCCN_2704 SM00267 diguanylate cyclase SYNPCCN_2712 SM00729 Elongator protein 3, MiaB family, Radical SAM SYNPCCN_2716 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) SYNPCCN_2716 SM00091 PAS domain SYNPCCN_2716 SM00387 Histidine kinase-like ATPases SYNPCCN_2717 SM00421 helix_turn_helix, Lux Regulon SYNPCCN_2717 SM00448 cheY-homologous receiver domain SYNPCCN_2720 SM00822 SYNPCCN_2720 SYNPCCN_2732 SM00387 Histidine kinase-like ATPases SYNPCCN_2732 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCN_2733 SM00448 cheY-homologous receiver domain SYNPCCN_2733 SM00862 Transcriptional regulatory protein, C terminal SYNPCCN_2738 SM00422 helix_turn_helix, mercury resistance SYNPCCN_2741 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor SYNPCCN_2743 SM00387 Histidine kinase-like ATPases SYNPCCN_2743 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCN_2744 SM00448 cheY-homologous receiver domain SYNPCCN_2744 SM00862 Transcriptional regulatory protein, C terminal SYNPCCN_2751 SM00729 Elongator protein 3, MiaB family, Radical SAM SYNPCCN_2755 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SYNPCCN_2755 SM00421 helix_turn_helix, Lux Regulon SYNPCCN_2758 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) SYNPCCN_2758 SM00091 PAS domain SYNPCCN_2758 SM00267 diguanylate cyclase SYNPCCN_2759 SM00240 Forkhead associated domain SYNPCCN_2759 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_2761 SM00220 Serine/Threonine protein kinases, catalytic domain SYNPCCN_2761 SM00287 Bacterial SH3 domain homologues SYNPCCN_2765 SM01118 SYNPCCN_2765 SYNPCCN_2768 SM00422 helix_turn_helix, mercury resistance SYNPCCN_2779 SM00831 Cation transporter/ATPase, N-terminus SYNPCCN_2783 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs SYNPCCN_2783 SM00474 3'-5' exonuclease SYNPCCN_2783 SM00475 5'-3' exonuclease SYNPCCN_2783 SM00482 DNA polymerase A domain SYNPCCN_2789 SM00465 GIY-YIG type nucleases (URI domain) SYNPCCN_2791 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SYNPCCN_2809 SM00890 Domain of unknown function SYNPCCN_2811 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_2814 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SYNPCCN_2814 SM00267 diguanylate cyclase SYNPCCN_2819 SM00260 Two component signalling adaptor domain SYNPCCN_2820 SM00073 Histidine Phosphotransfer domain SYNPCCN_2820 SM00260 Two component signalling adaptor domain SYNPCCN_2820 SM00387 Histidine kinase-like ATPases SYNPCCN_2820 SM00448 cheY-homologous receiver domain SYNPCCN_2820 SM01231 SYNPCCN_2820 SYNPCCN_2821 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). SYNPCCN_2822 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SYNPCCN_2822 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). SYNPCCN_2822 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SYNPCCN_2823 SM00260 Two component signalling adaptor domain SYNPCCN_2824 SM00448 cheY-homologous receiver domain SYNPCCN_2825 SM00448 cheY-homologous receiver domain SYNPCCN_2826 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. SYNPCCN_2830 SM00046 Diacylglycerol kinase catalytic domain (presumed) SYNPCCN_2830 SM00851 MGS-like domain SYNPCCN_2841 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_2842 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_2846 SM00360 RNA recognition motif SYNPCCN_2851 SM00849 Metallo-beta-lactamase superfamily SYNPCCN_2856 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SYNPCCN_2856 SM00387 Histidine kinase-like ATPases SYNPCCN_2856 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCN_2868 SM00836 DALR anticodon binding domain SYNPCCN_2868 SM01016 Arginyl tRNA synthetase N terminal dom SYNPCCN_2873 SM00028 Tetratricopeptide repeats SYNPCCN_2874 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_2883 SM01001 AIR carboxylase SYNPCCN_2887 SM00962 SRP54-type protein, GTPase domain SYNPCCN_2895 SM00271 DnaJ molecular chaperone homology domain SYNPCCN_2901 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_2901 SM00994 ClpX C4-type zinc finger SYNPCCN_2901 SM01086 C-terminal, D2-small domain, of ClpB protein SYNPCCN_2904 SM00859 Semialdehyde dehydrogenase, NAD binding domain SYNPCCN_2905 SM01130 SYNPCCN_2905 SYNPCCN_2906 SM00849 Metallo-beta-lactamase superfamily SYNPCCN_2910 SM00861 Transketolase, pyrimidine binding domain SYNPCCN_2911 SM00116 Domain in cystathionine beta-synthase and other proteins. SYNPCCN_2915 SM00897 FIST N domain SYNPCCN_2915 SM01204 SYNPCCN_2915 SYNPCCN_2926 SM00567 E-Z type HEAT repeats SYNPCCN_2927 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SYNPCCN_2933 SM00493 SYNPCCN_2933 SYNPCCN_2937 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SYNPCCN_2937 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCN_2941 SM00448 cheY-homologous receiver domain SYNPCCN_2941 SM00862 Transcriptional regulatory protein, C terminal SYNPCCN_2946 SM00930 SYNPCCN_2946 SYNPCCN_2949 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_2953 SM00487 DEAD-like helicases superfamily SYNPCCN_2953 SM00490 helicase superfamily c-terminal domain SYNPCCN_2955 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SYNPCCN_2955 SM00331 Sigma factor PP2C-like phosphatases SYNPCCN_2957 SM00838 Elongation factor G C-terminus SYNPCCN_2957 SM00889 Elongation factor G, domain IV SYNPCCN_2971 SM00255 Toll - interleukin 1 - resistance SYNPCCN_2989 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain SYNPCCN_3000 SM00320 WD40 repeats SYNPCCN_3003 SM01001 AIR carboxylase SYNPCCN_3010 SM00100 Cyclic nucleotide-monophosphate binding domain SYNPCCN_3017 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. SYNPCCN_3024 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SYNPCCN_3024 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) SYNPCCN_3024 SM00091 PAS domain SYNPCCN_3024 SM00387 Histidine kinase-like ATPases SYNPCCN_3024 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCN_3027 SM00448 cheY-homologous receiver domain SYNPCCN_3027 SM00862 Transcriptional regulatory protein, C terminal SYNPCCN_3031 SM00052 Putative diguanylate phosphodiesterase SYNPCCN_3031 SM00448 cheY-homologous receiver domain SYNPCCN_3033 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_3040 SM00028 Tetratricopeptide repeats SYNPCCN_3041 SM01192 SYNPCCN_3041 SYNPCCN_3041 SM01193 SYNPCCN_3041 SYNPCCN_3052 SM01247 SYNPCCN_3052 SYNPCCN_3053 SM01248 SYNPCCN_3053 SYNPCCN_3060 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_3068 SM00267 diguanylate cyclase SYNPCCN_3072 SM00732 Likely ribonuclease with RNase H fold. SYNPCCN_3080 SM00421 helix_turn_helix, Lux Regulon SYNPCCN_3081 SM00670 Large family of predicted nucleotide-binding domains SYNPCCN_3088 SM00100 Cyclic nucleotide-monophosphate binding domain SYNPCCN_3088 SM00419 helix_turn_helix, cAMP Regulatory protein SYNPCCN_3096 SM00487 DEAD-like helicases superfamily SYNPCCN_3096 SM00490 helicase superfamily c-terminal domain SYNPCCN_3096 SM01142 SYNPCCN_3096 SYNPCCN_3098 SM00465 GIY-YIG type nucleases (URI domain) SYNPCCN_3113 SM00387 Histidine kinase-like ATPases SYNPCCN_3116 SM00287 Bacterial SH3 domain homologues SYNPCCN_3118 SM00937 SYNPCCN_3118 SYNPCCN_3124 SM00450 Rhodanese Homology Domain SYNPCCN_3132 SM00829 Enoylreductase SYNPCCN_3142 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_3148 SM00100 Cyclic nucleotide-monophosphate binding domain SYNPCCN_3149 SM00382 ATPases associated with a variety of cellular activities SYNPCCN_3153 SM00798 AICARFT/IMPCHase bienzyme SYNPCCN_3153 SM00851 MGS-like domain SYNPCCN_3157 SM00220 Serine/Threonine protein kinases, catalytic domain SYNPCCN_3162 SM00306 Hint (Hedgehog/Intein) domain N-terminal region SYNPCCN_3162 SM00481 DNA polymerase alpha chain like domain SYNPCCN_3163 SM00838 Elongation factor G C-terminus SYNPCCN_3166 SM00100 Cyclic nucleotide-monophosphate binding domain SYNPCCN_3168 SM00833 Cobalamin synthesis protein cobW C-terminal domain