SYNPCCP_0010 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SYNPCCP_0010 SM00292 breast cancer carboxy-terminal domain SYNPCCP_0010 SM00532 Ligase N family SYNPCCP_0014 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_0017 SM00342 helix_turn_helix, arabinose operon control protein SYNPCCP_0022 SM00342 helix_turn_helix, arabinose operon control protein SYNPCCP_0028 SM00698 Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases. SYNPCCP_0029 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_0030 SM00342 helix_turn_helix, arabinose operon control protein SYNPCCP_0035 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_0050 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_0072 SM00072 Guanylate kinase homologues. SYNPCCP_0073 SM00855 Phosphoglycerate mutase family SYNPCCP_0077 SM00460 Transglutaminase/protease-like homologues SYNPCCP_0079 SM00244 prohibitin homologues SYNPCCP_0080 SM00316 Ribosomal protein S1-like RNA-binding domain SYNPCCP_0083 SM00316 Ribosomal protein S1-like RNA-binding domain SYNPCCP_0083 SM00322 K homology RNA-binding domain SYNPCCP_0085 SM00919 Malic enzyme, NAD binding domain SYNPCCP_0085 SM01274 SYNPCCP_0085 SYNPCCP_0090 SM00650 Ribosomal RNA adenine dimethylases SYNPCCP_0091 SM00046 Diacylglycerol kinase catalytic domain (presumed) SYNPCCP_0110 SM00091 PAS domain SYNPCCP_0110 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SYNPCCP_0110 SM00387 Histidine kinase-like ATPases SYNPCCP_0110 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCP_0118 SM00322 K homology RNA-binding domain SYNPCCP_0122 SM00642 Alpha-amylase domain SYNPCCP_0138 SM00062 Bacterial periplasmic substrate-binding proteins SYNPCCP_0141 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_0152 SM00849 Metallo-beta-lactamase superfamily SYNPCCP_0152 SM00903 Flavin reductase like domain SYNPCCP_0154 SM00849 Metallo-beta-lactamase superfamily SYNPCCP_0154 SM00903 Flavin reductase like domain SYNPCCP_0155 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. SYNPCCP_0155 SM00245 tail specific protease SYNPCCP_0167 SM00387 Histidine kinase-like ATPases SYNPCCP_0169 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_0173 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_0181 SM00567 E-Z type HEAT repeats SYNPCCP_0185 SM00052 Putative diguanylate phosphodiesterase SYNPCCP_0185 SM00091 PAS domain SYNPCCP_0185 SM00240 Forkhead associated domain SYNPCCP_0185 SM00267 diguanylate cyclase SYNPCCP_0186 SM00052 Putative diguanylate phosphodiesterase SYNPCCP_0186 SM00240 Forkhead associated domain SYNPCCP_0186 SM00267 diguanylate cyclase SYNPCCP_0187 SM00052 Putative diguanylate phosphodiesterase SYNPCCP_0187 SM00240 Forkhead associated domain SYNPCCP_0187 SM00267 diguanylate cyclase SYNPCCP_0193 SM00244 prohibitin homologues SYNPCCP_0195 SM00331 Sigma factor PP2C-like phosphatases SYNPCCP_0195 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain SYNPCCP_0197 SM00961 Ribulose bisphosphate carboxylase, small chain SYNPCCP_0199 SM00877 SYNPCCP_0199 SYNPCCP_0200 SM00877 SYNPCCP_0200 SYNPCCP_0202 SM00248 ankyrin repeats SYNPCCP_0211 SM00327 von Willebrand factor (vWF) type A domain SYNPCCP_0211 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_0214 SM01002 Alanine dehydrogenase/PNT, C-terminal domain SYNPCCP_0214 SM01003 Alanine dehydrogenase/PNT, N-terminal domain SYNPCCP_0217 SM00460 Transglutaminase/protease-like homologues SYNPCCP_0219 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. SYNPCCP_0220 SM00421 helix_turn_helix, Lux Regulon SYNPCCP_0220 SM00448 cheY-homologous receiver domain SYNPCCP_0229 SM00267 diguanylate cyclase SYNPCCP_0229 SM00448 cheY-homologous receiver domain SYNPCCP_0230 SM00387 Histidine kinase-like ATPases SYNPCCP_0230 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCP_0230 SM00448 cheY-homologous receiver domain SYNPCCP_0241 SM00028 Tetratricopeptide repeats SYNPCCP_0242 SM00271 DnaJ molecular chaperone homology domain SYNPCCP_0246 SM00567 E-Z type HEAT repeats SYNPCCP_0248 SM00267 diguanylate cyclase SYNPCCP_0249 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SYNPCCP_0259 SM01329 SYNPCCP_0259 SYNPCCP_0272 SM00507 HNH nucleases SYNPCCP_0273 SM00984 UDP binding domain SYNPCCP_0282 SM00052 Putative diguanylate phosphodiesterase SYNPCCP_0282 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) SYNPCCP_0282 SM00091 PAS domain SYNPCCP_0282 SM00267 diguanylate cyclase SYNPCCP_0282 SM00448 cheY-homologous receiver domain SYNPCCP_0295 SM00480 DNA polymerase III beta subunit SYNPCCP_0306 SM01387 SYNPCCP_0306 SYNPCCP_0324 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_0374 SM00849 Metallo-beta-lactamase superfamily SYNPCCP_0377 SM00387 Histidine kinase-like ATPases SYNPCCP_0377 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCP_0377 SM00448 cheY-homologous receiver domain SYNPCCP_0379 SM00237 Domains in Na-Ca exchangers and integrin-beta4 SYNPCCP_0390 SM00448 cheY-homologous receiver domain SYNPCCP_0390 SM00862 Transcriptional regulatory protein, C terminal SYNPCCP_0392 SM00849 Metallo-beta-lactamase superfamily SYNPCCP_0393 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain SYNPCCP_0393 SM01080 SYNPCCP_0393 SYNPCCP_0398 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SYNPCCP_0398 SM00267 diguanylate cyclase SYNPCCP_0398 SM00448 cheY-homologous receiver domain SYNPCCP_0406 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_0406 SM00393 Putative single-stranded nucleic acids-binding domain SYNPCCP_0412 SM00363 S4 RNA-binding domain SYNPCCP_0413 SM00052 Putative diguanylate phosphodiesterase SYNPCCP_0414 SM00448 cheY-homologous receiver domain SYNPCCP_0423 SM00729 Elongator protein 3, MiaB family, Radical SAM SYNPCCP_0434 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_0449 SM00448 cheY-homologous receiver domain SYNPCCP_0450 SM00448 cheY-homologous receiver domain SYNPCCP_0451 SM00260 Two component signalling adaptor domain SYNPCCP_0452 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). SYNPCCP_0452 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SYNPCCP_0455 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SYNPCCP_0455 SM00267 diguanylate cyclase SYNPCCP_0457 SM00271 DnaJ molecular chaperone homology domain SYNPCCP_0469 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) SYNPCCP_0469 SM00091 PAS domain SYNPCCP_0469 SM00387 Histidine kinase-like ATPases SYNPCCP_0469 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCP_0474 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_0476 SM00912 haemagglutination activity domain SYNPCCP_0479 SM01230 SYNPCCP_0479 SYNPCCP_0480 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SYNPCCP_0480 SM00073 Histidine Phosphotransfer domain SYNPCCP_0480 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) SYNPCCP_0480 SM00091 PAS domain SYNPCCP_0480 SM00387 Histidine kinase-like ATPases SYNPCCP_0480 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCP_0480 SM00448 cheY-homologous receiver domain SYNPCCP_0480 SM01079 SYNPCCP_0480 SYNPCCP_0481 SM00267 diguanylate cyclase SYNPCCP_0481 SM00448 cheY-homologous receiver domain SYNPCCP_0494 SM00244 prohibitin homologues SYNPCCP_0497 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain SYNPCCP_0500 SM00563 Phosphate acyltransferases SYNPCCP_0514 SM00861 Transketolase, pyrimidine binding domain SYNPCCP_0521 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase SYNPCCP_0527 SM00434 DNA Topoisomerase IV SYNPCCP_0528 SM00448 cheY-homologous receiver domain SYNPCCP_0536 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_0539 SM00112 Cadherin repeats. SYNPCCP_0541 SM00028 Tetratricopeptide repeats SYNPCCP_0547 SM00271 DnaJ molecular chaperone homology domain SYNPCCP_0555 SM00421 helix_turn_helix, Lux Regulon SYNPCCP_0555 SM00448 cheY-homologous receiver domain SYNPCCP_0556 SM00646 SYNPCCP_0556 SYNPCCP_0578 SM00729 Elongator protein 3, MiaB family, Radical SAM SYNPCCP_0589 SM00829 Enoylreductase SYNPCCP_0590 SM00108 Bulb-type mannose-specific lectin SYNPCCP_0590 SM00191 Integrin alpha (beta-propellor repeats). SYNPCCP_0590 SM00237 Domains in Na-Ca exchangers and integrin-beta4 SYNPCCP_0590 SM00560 LamG-like jellyroll fold domain SYNPCCP_0591 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_0601 SM00448 cheY-homologous receiver domain SYNPCCP_0619 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SYNPCCP_0619 SM00091 PAS domain SYNPCCP_0623 SM00073 Histidine Phosphotransfer domain SYNPCCP_0623 SM00260 Two component signalling adaptor domain SYNPCCP_0623 SM00387 Histidine kinase-like ATPases SYNPCCP_0623 SM00448 cheY-homologous receiver domain SYNPCCP_0623 SM01231 SYNPCCP_0623 SYNPCCP_0624 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). SYNPCCP_0624 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SYNPCCP_0625 SM00260 Two component signalling adaptor domain SYNPCCP_0626 SM00448 cheY-homologous receiver domain SYNPCCP_0627 SM00448 cheY-homologous receiver domain SYNPCCP_0628 SM00955 SYNPCCP_0628 SYNPCCP_0630 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_0632 SM00899 SYNPCCP_0632 SYNPCCP_0635 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SYNPCCP_0635 SM00091 PAS domain SYNPCCP_0635 SM00387 Histidine kinase-like ATPases SYNPCCP_0635 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCP_0642 SM00729 Elongator protein 3, MiaB family, Radical SAM SYNPCCP_0647 SM00292 breast cancer carboxy-terminal domain SYNPCCP_0653 SM01094 CpcD/allophycocyanin linker domain SYNPCCP_0654 SM01094 CpcD/allophycocyanin linker domain SYNPCCP_0655 SM01094 CpcD/allophycocyanin linker domain SYNPCCP_0660 SM00220 Serine/Threonine protein kinases, catalytic domain SYNPCCP_0669 SM00240 Forkhead associated domain SYNPCCP_0671 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_0684 SM00327 von Willebrand factor (vWF) type A domain SYNPCCP_0685 SM00100 Cyclic nucleotide-monophosphate binding domain SYNPCCP_0685 SM00419 helix_turn_helix, cAMP Regulatory protein SYNPCCP_0690 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_0693 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. SYNPCCP_0694 SM00448 cheY-homologous receiver domain SYNPCCP_0696 SM00729 Elongator protein 3, MiaB family, Radical SAM SYNPCCP_0702 SM00670 Large family of predicted nucleotide-binding domains SYNPCCP_0705 SM00316 Ribosomal protein S1-like RNA-binding domain SYNPCCP_0705 SM00357 Cold shock protein domain SYNPCCP_0705 SM00955 SYNPCCP_0705 SYNPCCP_0707 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SYNPCCP_0707 SM00331 Sigma factor PP2C-like phosphatases SYNPCCP_0711 SM00729 Elongator protein 3, MiaB family, Radical SAM SYNPCCP_0717 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_0723 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SYNPCCP_0724 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SYNPCCP_0724 SM00267 diguanylate cyclase SYNPCCP_0725 SM00831 Cation transporter/ATPase, N-terminus SYNPCCP_0729 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SYNPCCP_0729 SM00387 Histidine kinase-like ATPases SYNPCCP_0729 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCP_0731 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_0735 SM00861 Transketolase, pyrimidine binding domain SYNPCCP_0736 SM00825 Beta-ketoacyl synthase SYNPCCP_0743 SM00788 Adenylosuccinate synthetase SYNPCCP_0750 SM00662 RNA polymerases D SYNPCCP_0754 SM00316 Ribosomal protein S1-like RNA-binding domain SYNPCCP_0763 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. SYNPCCP_0764 SM01374 SYNPCCP_0764 SYNPCCP_0768 SM00322 K homology RNA-binding domain SYNPCCP_0771 SM01382 SYNPCCP_0771 SYNPCCP_0771 SM01383 SYNPCCP_0771 SYNPCCP_0784 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_0793 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SYNPCCP_0793 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) SYNPCCP_0793 SM00091 PAS domain SYNPCCP_0793 SM00387 Histidine kinase-like ATPases SYNPCCP_0793 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCP_0796 SM00968 SMC proteins Flexible Hinge Domain SYNPCCP_0800 SM00028 Tetratricopeptide repeats SYNPCCP_0805 SM00853 MutL C terminal dimerisation domain SYNPCCP_0805 SM01340 SYNPCCP_0805 SYNPCCP_0810 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. SYNPCCP_0815 SM01007 Class II Aldolase and Adducin N-terminal domain SYNPCCP_0819 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SYNPCCP_0819 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) SYNPCCP_0819 SM00091 PAS domain SYNPCCP_0819 SM00387 Histidine kinase-like ATPases SYNPCCP_0820 SM00342 helix_turn_helix, arabinose operon control protein SYNPCCP_0820 SM00448 cheY-homologous receiver domain SYNPCCP_0821 SM00448 cheY-homologous receiver domain SYNPCCP_0824 SM00116 Domain in cystathionine beta-synthase and other proteins. SYNPCCP_0824 SM00924 MgtE intracellular N domain SYNPCCP_0835 SM00883 Chaperonin 10 Kd subunit SYNPCCP_0837 SM00052 Putative diguanylate phosphodiesterase SYNPCCP_0837 SM00062 Bacterial periplasmic substrate-binding proteins SYNPCCP_0837 SM00267 diguanylate cyclase SYNPCCP_0844 SM00649 Ribosomal protein L11/L12 SYNPCCP_0845 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. SYNPCCP_0845 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. SYNPCCP_0857 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. SYNPCCP_0865 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_0869 SM00448 cheY-homologous receiver domain SYNPCCP_0869 SM00862 Transcriptional regulatory protein, C terminal SYNPCCP_0870 SM00861 Transketolase, pyrimidine binding domain SYNPCCP_0871 SM00877 SYNPCCP_0871 SYNPCCP_0872 SM00877 SYNPCCP_0872 SYNPCCP_0883 SM00411 bacterial (prokaryotic) histone like domain SYNPCCP_0886 SM00487 DEAD-like helicases superfamily SYNPCCP_0886 SM00490 helicase superfamily c-terminal domain SYNPCCP_0902 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_0913 SM00926 Molybdopterin oxidoreductase Fe4S4 domain SYNPCCP_0914 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_0915 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_0919 SM00855 Phosphoglycerate mutase family SYNPCCP_0921 SM00864 Tubulin/FtsZ family, GTPase domain SYNPCCP_0921 SM00865 Tubulin/FtsZ family, C-terminal domain SYNPCCP_0923 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. SYNPCCP_0923 SM00245 tail specific protease SYNPCCP_0927 SM00988 UreE urease accessory protein, N-terminal domain SYNPCCP_0933 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_0934 SM00220 Serine/Threonine protein kinases, catalytic domain SYNPCCP_0961 SM01002 Alanine dehydrogenase/PNT, C-terminal domain SYNPCCP_0961 SM01003 Alanine dehydrogenase/PNT, N-terminal domain SYNPCCP_0972 SM00305 Hint (Hedgehog/Intein) domain C-terminal region SYNPCCP_0972 SM00306 Hint (Hedgehog/Intein) domain N-terminal region SYNPCCP_0972 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_0975 SM00835 Cupin SYNPCCP_0980 SM00220 Serine/Threonine protein kinases, catalytic domain SYNPCCP_0981 SM00880 SYNPCCP_0981 SYNPCCP_0984 SM00387 Histidine kinase-like ATPases SYNPCCP_0984 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCP_0995 SM00316 Ribosomal protein S1-like RNA-binding domain SYNPCCP_0998 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_1003 SM00729 Elongator protein 3, MiaB family, Radical SAM SYNPCCP_1003 SM00876 Biotin and Thiamin Synthesis associated domain SYNPCCP_1009 SM00062 Bacterial periplasmic substrate-binding proteins SYNPCCP_1009 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. SYNPCCP_1019 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SYNPCCP_1022 SM00360 RNA recognition motif SYNPCCP_1024 SM00257 Lysin motif SYNPCCP_1034 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SYNPCCP_1037 SM00729 Elongator protein 3, MiaB family, Radical SAM SYNPCCP_1039 SM00822 SYNPCCP_1039 SYNPCCP_1045 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SYNPCCP_1045 SM00465 GIY-YIG type nucleases (URI domain) SYNPCCP_1046 SM00287 Bacterial SH3 domain homologues SYNPCCP_1046 SM00646 SYNPCCP_1046 SYNPCCP_1047 SM00232 JAB/MPN domain SYNPCCP_1059 SM00191 Integrin alpha (beta-propellor repeats). SYNPCCP_1059 SM00237 Domains in Na-Ca exchangers and integrin-beta4 SYNPCCP_1063 SM00320 WD40 repeats SYNPCCP_1064 SM00320 WD40 repeats SYNPCCP_1077 SM00642 Alpha-amylase domain SYNPCCP_1079 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SYNPCCP_1079 SM00331 Sigma factor PP2C-like phosphatases SYNPCCP_1086 SM01133 SYNPCCP_1086 SYNPCCP_1093 SM00463 Small MutS-related domain SYNPCCP_1093 SM00533 DNA-binding domain of DNA mismatch repair MUTS family SYNPCCP_1093 SM00534 ATPase domain of DNA mismatch repair MUTS family SYNPCCP_1094 SM00331 Sigma factor PP2C-like phosphatases SYNPCCP_1094 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain SYNPCCP_1106 SM00567 E-Z type HEAT repeats SYNPCCP_1111 SM00062 Bacterial periplasmic substrate-binding proteins SYNPCCP_1118 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_1119 SM00904 Riboflavin kinase SYNPCCP_1122 SM01093 SYNPCCP_1122 SYNPCCP_1125 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SYNPCCP_1141 SM00507 HNH nucleases SYNPCCP_1143 SM00305 Hint (Hedgehog/Intein) domain C-terminal region SYNPCCP_1143 SM00306 Hint (Hedgehog/Intein) domain N-terminal region SYNPCCP_1143 SM00387 Histidine kinase-like ATPases SYNPCCP_1143 SM00433 TopoisomeraseII SYNPCCP_1155 SM00421 helix_turn_helix, Lux Regulon SYNPCCP_1155 SM00448 cheY-homologous receiver domain SYNPCCP_1156 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SYNPCCP_1156 SM00387 Histidine kinase-like ATPases SYNPCCP_1156 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCP_1183 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SYNPCCP_1183 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) SYNPCCP_1183 SM00091 PAS domain SYNPCCP_1183 SM00267 diguanylate cyclase SYNPCCP_1184 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. SYNPCCP_1185 SM00478 endonuclease III SYNPCCP_1185 SM00525 SYNPCCP_1185 SYNPCCP_1190 SM00028 Tetratricopeptide repeats SYNPCCP_1192 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_1195 SM00448 cheY-homologous receiver domain SYNPCCP_1195 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SYNPCCP_1196 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_1207 SM00646 SYNPCCP_1207 SYNPCCP_1224 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_1224 SM00760 Bacterial dnaA protein helix-turn-helix domain SYNPCCP_1232 SM00642 Alpha-amylase domain SYNPCCP_1233 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_1236 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family SYNPCCP_1237 SM00028 Tetratricopeptide repeats SYNPCCP_1244 SM00533 DNA-binding domain of DNA mismatch repair MUTS family SYNPCCP_1244 SM00534 ATPase domain of DNA mismatch repair MUTS family SYNPCCP_1249 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain SYNPCCP_1263 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_1274 SM00062 Bacterial periplasmic substrate-binding proteins SYNPCCP_1274 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. SYNPCCP_1276 SM00849 Metallo-beta-lactamase superfamily SYNPCCP_1278 SM00450 Rhodanese Homology Domain SYNPCCP_1281 SM00345 helix_turn_helix gluconate operon transcriptional repressor SYNPCCP_1285 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor SYNPCCP_1287 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain SYNPCCP_1287 SM00437 Bacterial DNA topoisomerase I DNA-binding domain SYNPCCP_1287 SM00493 SYNPCCP_1287 SYNPCCP_1288 SM00930 SYNPCCP_1288 SYNPCCP_1289 SM00563 Phosphate acyltransferases SYNPCCP_1299 SM01094 CpcD/allophycocyanin linker domain SYNPCCP_1303 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain SYNPCCP_1303 SM00240 Forkhead associated domain SYNPCCP_1306 SM00822 SYNPCCP_1306 SYNPCCP_1308 SM00073 Histidine Phosphotransfer domain SYNPCCP_1308 SM00091 PAS domain SYNPCCP_1308 SM00387 Histidine kinase-like ATPases SYNPCCP_1308 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCP_1308 SM00448 cheY-homologous receiver domain SYNPCCP_1320 SM00831 Cation transporter/ATPase, N-terminus SYNPCCP_1327 SM00460 Transglutaminase/protease-like homologues SYNPCCP_1335 SM01240 SYNPCCP_1335 SYNPCCP_1341 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_1344 SM01248 SYNPCCP_1344 SYNPCCP_1345 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_1349 SM00421 helix_turn_helix, Lux Regulon SYNPCCP_1349 SM00448 cheY-homologous receiver domain SYNPCCP_1350 SM00387 Histidine kinase-like ATPases SYNPCCP_1350 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCP_1385 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_1389 SM00631 SYNPCCP_1389 SYNPCCP_1392 SM00507 HNH nucleases SYNPCCP_1415 SM00073 Histidine Phosphotransfer domain SYNPCCP_1415 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) SYNPCCP_1415 SM00091 PAS domain SYNPCCP_1415 SM00387 Histidine kinase-like ATPases SYNPCCP_1415 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCP_1415 SM00448 cheY-homologous receiver domain SYNPCCP_1416 SM00387 Histidine kinase-like ATPases SYNPCCP_1416 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCP_1416 SM00448 cheY-homologous receiver domain SYNPCCP_1417 SM00448 cheY-homologous receiver domain SYNPCCP_1417 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SYNPCCP_1419 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_1419 SM00962 SRP54-type protein, GTPase domain SYNPCCP_1419 SM00963 SRP54-type protein, helical bundle domain SYNPCCP_1421 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SYNPCCP_1421 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) SYNPCCP_1421 SM00091 PAS domain SYNPCCP_1421 SM00387 Histidine kinase-like ATPases SYNPCCP_1421 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCP_1421 SM00448 cheY-homologous receiver domain SYNPCCP_1422 SM01207 SYNPCCP_1422 SYNPCCP_1429 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. SYNPCCP_1434 SM00100 Cyclic nucleotide-monophosphate binding domain SYNPCCP_1434 SM00419 helix_turn_helix, cAMP Regulatory protein SYNPCCP_1451 SM01329 SYNPCCP_1451 SYNPCCP_1466 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_1490 SM01004 Delta-aminolevulinic acid dehydratase SYNPCCP_1499 SM00387 Histidine kinase-like ATPases SYNPCCP_1499 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCP_1499 SM00448 cheY-homologous receiver domain SYNPCCP_1502 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SYNPCCP_1502 SM00954 Region found in RelA / SpoT proteins SYNPCCP_1503 SM00996 S-adenosyl-L-homocysteine hydrolase SYNPCCP_1503 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain SYNPCCP_1505 SM00670 Large family of predicted nucleotide-binding domains SYNPCCP_1506 SM00460 Transglutaminase/protease-like homologues SYNPCCP_1509 SM00387 Histidine kinase-like ATPases SYNPCCP_1509 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCP_1509 SM00448 cheY-homologous receiver domain SYNPCCP_1510 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SYNPCCP_1510 SM00387 Histidine kinase-like ATPases SYNPCCP_1510 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCP_1510 SM00448 cheY-homologous receiver domain SYNPCCP_1511 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_1514 SM00825 Beta-ketoacyl synthase SYNPCCP_1519 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region SYNPCCP_1521 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region SYNPCCP_1541 SM00244 prohibitin homologues SYNPCCP_1562 SM00831 Cation transporter/ATPase, N-terminus SYNPCCP_1563 SM00028 Tetratricopeptide repeats SYNPCCP_1576 SM00327 von Willebrand factor (vWF) type A domain SYNPCCP_1583 SM00116 Domain in cystathionine beta-synthase and other proteins. SYNPCCP_1584 SM00363 S4 RNA-binding domain SYNPCCP_1586 SM00028 Tetratricopeptide repeats SYNPCCP_1590 SM00947 Carbonic anhydrase SYNPCCP_1599 SM00729 Elongator protein 3, MiaB family, Radical SAM SYNPCCP_1600 SM00028 Tetratricopeptide repeats SYNPCCP_1607 SM00479 SYNPCCP_1607 SYNPCCP_1611 SM00052 Putative diguanylate phosphodiesterase SYNPCCP_1611 SM00240 Forkhead associated domain SYNPCCP_1611 SM00267 diguanylate cyclase SYNPCCP_1618 SM00028 Tetratricopeptide repeats SYNPCCP_1621 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SYNPCCP_1621 SM00387 Histidine kinase-like ATPases SYNPCCP_1621 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCP_1621 SM00448 cheY-homologous receiver domain SYNPCCP_1625 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SYNPCCP_1625 SM00387 Histidine kinase-like ATPases SYNPCCP_1625 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCP_1627 SM00670 Large family of predicted nucleotide-binding domains SYNPCCP_1630 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_1633 SM00028 Tetratricopeptide repeats SYNPCCP_1636 SM00448 cheY-homologous receiver domain SYNPCCP_1637 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_1642 SM00729 Elongator protein 3, MiaB family, Radical SAM SYNPCCP_1647 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SYNPCCP_1647 SM00387 Histidine kinase-like ATPases SYNPCCP_1647 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCP_1648 SM00448 cheY-homologous receiver domain SYNPCCP_1649 SM00331 Sigma factor PP2C-like phosphatases SYNPCCP_1649 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCP_1649 SM00448 cheY-homologous receiver domain SYNPCCP_1650 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_1652 SM00316 Ribosomal protein S1-like RNA-binding domain SYNPCCP_1653 SM00400 zinc finger SYNPCCP_1653 SM00493 SYNPCCP_1653 SYNPCCP_1669 SM00393 Putative single-stranded nucleic acids-binding domain SYNPCCP_1670 SM00028 Tetratricopeptide repeats SYNPCCP_1670 SM00271 DnaJ molecular chaperone homology domain SYNPCCP_1684 SM00100 Cyclic nucleotide-monophosphate binding domain SYNPCCP_1684 SM00419 helix_turn_helix, cAMP Regulatory protein SYNPCCP_1689 SM00100 Cyclic nucleotide-monophosphate binding domain SYNPCCP_1689 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_1690 SM00663 RNA polymerase I subunit A N-terminus SYNPCCP_1712 SM00091 PAS domain SYNPCCP_1712 SM00267 diguanylate cyclase SYNPCCP_1713 SM00100 Cyclic nucleotide-monophosphate binding domain SYNPCCP_1714 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCP_1725 SM00100 Cyclic nucleotide-monophosphate binding domain SYNPCCP_1730 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_1730 SM00962 SRP54-type protein, GTPase domain SYNPCCP_1730 SM00963 SRP54-type protein, helical bundle domain SYNPCCP_1733 SM00845 GatB domain SYNPCCP_1741 SM00062 Bacterial periplasmic substrate-binding proteins SYNPCCP_1744 SM01403 SYNPCCP_1744 SYNPCCP_1746 SM00838 Elongation factor G C-terminus SYNPCCP_1746 SM00889 Elongation factor G, domain IV SYNPCCP_1750 SM01209 SYNPCCP_1750 SYNPCCP_1750 SM01210 SYNPCCP_1750 SYNPCCP_1779 SM00967 RNA 2'-O ribose methyltransferase substrate binding SYNPCCP_1787 SM00917 LeuA allosteric (dimerisation) domain SYNPCCP_1800 SM00240 Forkhead associated domain SYNPCCP_1802 SM00567 E-Z type HEAT repeats SYNPCCP_1804 SM00881 CoA binding domain SYNPCCP_1806 SM00387 Histidine kinase-like ATPases SYNPCCP_1806 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCP_1806 SM00448 cheY-homologous receiver domain SYNPCCP_1808 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain SYNPCCP_1808 SM01232 SYNPCCP_1808 SYNPCCP_1811 SM00052 Putative diguanylate phosphodiesterase SYNPCCP_1812 SM00448 cheY-homologous receiver domain SYNPCCP_1813 SM01034 Sensors of blue-light using FAD SYNPCCP_1814 SM00873 B3/4 domain SYNPCCP_1814 SM00874 tRNA synthetase B5 domain SYNPCCP_1814 SM00896 Ferredoxin-fold anticodon binding domain SYNPCCP_1815 SM00220 Serine/Threonine protein kinases, catalytic domain SYNPCCP_1816 SM00421 helix_turn_helix, Lux Regulon SYNPCCP_1816 SM00448 cheY-homologous receiver domain SYNPCCP_1832 SM00226 Low molecular weight phosphatase family SYNPCCP_1833 SM00448 cheY-homologous receiver domain SYNPCCP_1833 SM00862 Transcriptional regulatory protein, C terminal SYNPCCP_1836 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_1838 SM00363 S4 RNA-binding domain SYNPCCP_1840 SM00028 Tetratricopeptide repeats SYNPCCP_1841 SM00271 DnaJ molecular chaperone homology domain SYNPCCP_1846 SM00535 Ribonuclease III family SYNPCCP_1847 SM00967 RNA 2'-O ribose methyltransferase substrate binding SYNPCCP_1849 SM00840 SYNPCCP_1849 SYNPCCP_1861 SM00905 Dihydroneopterin aldolase SYNPCCP_1863 SM00450 Rhodanese Homology Domain SYNPCCP_1865 SM00363 S4 RNA-binding domain SYNPCCP_1880 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_1880 SM01086 C-terminal, D2-small domain, of ClpB protein SYNPCCP_1883 SM01094 CpcD/allophycocyanin linker domain SYNPCCP_1885 SM00028 Tetratricopeptide repeats SYNPCCP_1887 SM00358 Double-stranded RNA binding motif SYNPCCP_1887 SM00535 Ribonuclease III family SYNPCCP_1893 SM00849 Metallo-beta-lactamase superfamily SYNPCCP_1893 SM00903 Flavin reductase like domain SYNPCCP_1896 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. SYNPCCP_1905 SM00729 Elongator protein 3, MiaB family, Radical SAM SYNPCCP_1908 SM00998 Adenylosuccinate lyase C-terminus SYNPCCP_1915 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_1921 SM00487 DEAD-like helicases superfamily SYNPCCP_1921 SM00490 helicase superfamily c-terminal domain SYNPCCP_1924 SM00052 Putative diguanylate phosphodiesterase SYNPCCP_1924 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SYNPCCP_1924 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) SYNPCCP_1924 SM00091 PAS domain SYNPCCP_1924 SM00267 diguanylate cyclase SYNPCCP_1924 SM01079 SYNPCCP_1924 SYNPCCP_1934 SM01091 Transporter associated domain SYNPCCP_1937 SM01230 SYNPCCP_1937 SYNPCCP_1946 SM00507 HNH nucleases SYNPCCP_1950 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain SYNPCCP_1960 SM00938 Nitrogen regulatory protein P-II SYNPCCP_1968 SM00191 Integrin alpha (beta-propellor repeats). SYNPCCP_1968 SM00237 Domains in Na-Ca exchangers and integrin-beta4 SYNPCCP_1968 SM00560 LamG-like jellyroll fold domain SYNPCCP_1970 SM00320 WD40 repeats SYNPCCP_1971 SM00989 SYNPCCP_1971 SYNPCCP_1974 SM00989 SYNPCCP_1974 SYNPCCP_1978 SM00028 Tetratricopeptide repeats SYNPCCP_1979 SM00220 Serine/Threonine protein kinases, catalytic domain SYNPCCP_1987 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_1987 SM01086 C-terminal, D2-small domain, of ClpB protein SYNPCCP_1991 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_1995 SM01011 Aminopeptidase P, N-terminal domain SYNPCCP_2004 SM00937 SYNPCCP_2004 SYNPCCP_2005 SM00116 Domain in cystathionine beta-synthase and other proteins. SYNPCCP_2023 SM00562 SYNPCCP_2023 SYNPCCP_2029 SM00563 Phosphate acyltransferases SYNPCCP_2040 SM00235 Zinc-dependent metalloprotease SYNPCCP_2044 SM00240 Forkhead associated domain SYNPCCP_2048 SM00257 Lysin motif SYNPCCP_2054 SM00729 Elongator protein 3, MiaB family, Radical SAM SYNPCCP_2057 SM00260 Two component signalling adaptor domain SYNPCCP_2057 SM00387 Histidine kinase-like ATPases SYNPCCP_2057 SM00448 cheY-homologous receiver domain SYNPCCP_2057 SM01231 SYNPCCP_2057 SYNPCCP_2058 SM00872 Alpha mannosidase, middle domain SYNPCCP_2065 SM00226 Low molecular weight phosphatase family SYNPCCP_2070 SM00421 helix_turn_helix, Lux Regulon SYNPCCP_2079 SM00933 SYNPCCP_2079 SYNPCCP_2083 SM00877 SYNPCCP_2083 SYNPCCP_2084 SM00028 Tetratricopeptide repeats SYNPCCP_2085 SM00116 Domain in cystathionine beta-synthase and other proteins. SYNPCCP_2086 SM00857 Resolvase, N terminal domain SYNPCCP_2090 SM00062 Bacterial periplasmic substrate-binding proteins SYNPCCP_2095 SM00271 DnaJ molecular chaperone homology domain SYNPCCP_2099 SM00320 WD40 repeats SYNPCCP_2108 SM00642 Alpha-amylase domain SYNPCCP_2114 SM00917 LeuA allosteric (dimerisation) domain SYNPCCP_2115 SM00052 Putative diguanylate phosphodiesterase SYNPCCP_2115 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SYNPCCP_2115 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) SYNPCCP_2115 SM00091 PAS domain SYNPCCP_2115 SM00267 diguanylate cyclase SYNPCCP_2117 SM00363 S4 RNA-binding domain SYNPCCP_2122 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins SYNPCCP_2125 SM00091 PAS domain SYNPCCP_2125 SM00387 Histidine kinase-like ATPases SYNPCCP_2125 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCP_2129 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_2136 SM00822 SYNPCCP_2136 SYNPCCP_2139 SM01350 SYNPCCP_2139 SYNPCCP_2158 SM00450 Rhodanese Homology Domain SYNPCCP_2160 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_2164 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_2176 SM00387 Histidine kinase-like ATPases SYNPCCP_2176 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCP_2176 SM01248 SYNPCCP_2176 SYNPCCP_2177 SM00909 Sporulation and spore germination SYNPCCP_2180 SM00062 Bacterial periplasmic substrate-binding proteins SYNPCCP_2186 SM00358 Double-stranded RNA binding motif SYNPCCP_2186 SM00535 Ribonuclease III family SYNPCCP_2190 SM00474 3'-5' exonuclease SYNPCCP_2200 SM00028 Tetratricopeptide repeats SYNPCCP_2201 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_2213 SM00903 Flavin reductase like domain SYNPCCP_2215 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_2215 SM01086 C-terminal, D2-small domain, of ClpB protein SYNPCCP_2219 SM00925 MltA specific insert domain SYNPCCP_2222 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. SYNPCCP_2222 SM00245 tail specific protease SYNPCCP_2225 SM00961 Ribulose bisphosphate carboxylase, small chain SYNPCCP_2240 SM00487 DEAD-like helicases superfamily SYNPCCP_2240 SM00490 helicase superfamily c-terminal domain SYNPCCP_2256 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) SYNPCCP_2256 SM00091 PAS domain SYNPCCP_2256 SM00387 Histidine kinase-like ATPases SYNPCCP_2256 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCP_2256 SM00448 cheY-homologous receiver domain SYNPCCP_2257 SM01228 SYNPCCP_2257 SYNPCCP_2264 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_2265 SM00464 Found in ATP-dependent protease La (LON) SYNPCCP_2269 SM00478 endonuclease III SYNPCCP_2273 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. SYNPCCP_2275 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_2283 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain SYNPCCP_2285 SM00841 Elongation factor P, C-terminal SYNPCCP_2285 SM01185 SYNPCCP_2285 SYNPCCP_2287 SM00877 SYNPCCP_2287 SYNPCCP_2288 SM00670 Large family of predicted nucleotide-binding domains SYNPCCP_2293 SM00320 WD40 repeats SYNPCCP_2297 SM00855 Phosphoglycerate mutase family SYNPCCP_2301 SM00849 Metallo-beta-lactamase superfamily SYNPCCP_2302 SM00530 Helix-turn-helix XRE-family like proteins SYNPCCP_2305 SM00947 Carbonic anhydrase SYNPCCP_2307 SM00567 E-Z type HEAT repeats SYNPCCP_2316 SM00062 Bacterial periplasmic substrate-binding proteins SYNPCCP_2328 SM00981 SYNPCCP_2328 SYNPCCP_2333 SM00878 Biotin carboxylase C-terminal domain SYNPCCP_2337 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_2339 SM00363 S4 RNA-binding domain SYNPCCP_2339 SM01390 SYNPCCP_2339 SYNPCCP_2342 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SYNPCCP_2342 SM00091 PAS domain SYNPCCP_2342 SM00387 Histidine kinase-like ATPases SYNPCCP_2342 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCP_2343 SM00448 cheY-homologous receiver domain SYNPCCP_2344 SM00487 DEAD-like helicases superfamily SYNPCCP_2344 SM00490 helicase superfamily c-terminal domain SYNPCCP_2349 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_2352 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SYNPCCP_2352 SM00387 Histidine kinase-like ATPases SYNPCCP_2352 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCP_2353 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) SYNPCCP_2353 SM00091 PAS domain SYNPCCP_2372 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_2373 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_2381 SM00849 Metallo-beta-lactamase superfamily SYNPCCP_2382 SM00957 SecA DEAD-like domain SYNPCCP_2382 SM00958 SecA preprotein cross-linking domain SYNPCCP_2385 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_2394 SM00387 Histidine kinase-like ATPases SYNPCCP_2394 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCP_2402 SM00331 Sigma factor PP2C-like phosphatases SYNPCCP_2402 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain SYNPCCP_2403 SM00327 von Willebrand factor (vWF) type A domain SYNPCCP_2408 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SYNPCCP_2410 SM00448 cheY-homologous receiver domain SYNPCCP_2410 SM00862 Transcriptional regulatory protein, C terminal SYNPCCP_2411 SM00855 Phosphoglycerate mutase family SYNPCCP_2415 SM00434 DNA Topoisomerase IV SYNPCCP_2417 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_2430 SM00487 DEAD-like helicases superfamily SYNPCCP_2430 SM00490 helicase superfamily c-terminal domain SYNPCCP_2430 SM00982 SYNPCCP_2430 SYNPCCP_2430 SM01058 CarD-like/TRCF domain SYNPCCP_2433 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_2438 SM00851 MGS-like domain SYNPCCP_2438 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SYNPCCP_2442 SM00852 Probable molybdopterin binding domain SYNPCCP_2446 SM00450 Rhodanese Homology Domain SYNPCCP_2447 SM00360 RNA recognition motif SYNPCCP_2451 SM00155 Phospholipase D. Active site motifs. SYNPCCP_2451 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SYNPCCP_2452 SM00959 Rho termination factor, N-terminal domain SYNPCCP_2457 SM00028 Tetratricopeptide repeats SYNPCCP_2469 SM00387 Histidine kinase-like ATPases SYNPCCP_2469 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCP_2472 SM01234 SYNPCCP_2472 SYNPCCP_2473 SM01018 B12 binding domain SYNPCCP_2479 SM00028 Tetratricopeptide repeats SYNPCCP_2482 SM00637 SYNPCCP_2482 SYNPCCP_2484 SM01116 SYNPCCP_2484 SYNPCCP_2485 SM00852 Probable molybdopterin binding domain SYNPCCP_2486 SM00729 Elongator protein 3, MiaB family, Radical SAM SYNPCCP_2491 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_2492 SM00729 Elongator protein 3, MiaB family, Radical SAM SYNPCCP_2517 SM00756 SYNPCCP_2517 SYNPCCP_2518 SM00849 Metallo-beta-lactamase superfamily SYNPCCP_2518 SM00903 Flavin reductase like domain SYNPCCP_2519 SM00481 DNA polymerase alpha chain like domain SYNPCCP_2523 SM00014 Acid phosphatase homologues SYNPCCP_2546 SM01005 Alanine racemase, C-terminal domain SYNPCCP_2547 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) SYNPCCP_2547 SM00091 PAS domain SYNPCCP_2547 SM00267 diguanylate cyclase SYNPCCP_2547 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SYNPCCP_2550 SM00732 Likely ribonuclease with RNase H fold. SYNPCCP_2552 SM00305 Hint (Hedgehog/Intein) domain C-terminal region SYNPCCP_2552 SM00306 Hint (Hedgehog/Intein) domain N-terminal region SYNPCCP_2556 SM00838 Elongation factor G C-terminus SYNPCCP_2556 SM00889 Elongation factor G, domain IV SYNPCCP_2563 SM00052 Putative diguanylate phosphodiesterase SYNPCCP_2563 SM00100 Cyclic nucleotide-monophosphate binding domain SYNPCCP_2572 SM00052 Putative diguanylate phosphodiesterase SYNPCCP_2572 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SYNPCCP_2572 SM00267 diguanylate cyclase SYNPCCP_2576 SM00073 Histidine Phosphotransfer domain SYNPCCP_2590 SM00448 cheY-homologous receiver domain SYNPCCP_2590 SM00862 Transcriptional regulatory protein, C terminal SYNPCCP_2591 SM00729 Elongator protein 3, MiaB family, Radical SAM SYNPCCP_2592 SM00487 DEAD-like helicases superfamily SYNPCCP_2592 SM00490 helicase superfamily c-terminal domain SYNPCCP_2593 SM00859 Semialdehyde dehydrogenase, NAD binding domain SYNPCCP_2595 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain SYNPCCP_2602 SM00271 DnaJ molecular chaperone homology domain SYNPCCP_2606 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_2610 SM01248 SYNPCCP_2610 SYNPCCP_2611 SM00448 cheY-homologous receiver domain SYNPCCP_2612 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_2621 SM00100 Cyclic nucleotide-monophosphate binding domain SYNPCCP_2630 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) SYNPCCP_2630 SM00387 Histidine kinase-like ATPases SYNPCCP_2630 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCP_2635 SM01211 SYNPCCP_2635 SYNPCCP_2640 SM01400 SYNPCCP_2640 SYNPCCP_2646 SM00419 helix_turn_helix, cAMP Regulatory protein SYNPCCP_2648 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_2665 SM00028 Tetratricopeptide repeats SYNPCCP_2670 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SYNPCCP_2671 SM00327 von Willebrand factor (vWF) type A domain SYNPCCP_2683 SM00387 Histidine kinase-like ATPases SYNPCCP_2683 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCP_2687 SM00331 Sigma factor PP2C-like phosphatases SYNPCCP_2688 SM00448 cheY-homologous receiver domain SYNPCCP_2688 SM00862 Transcriptional regulatory protein, C terminal SYNPCCP_2700 SM00240 Forkhead associated domain SYNPCCP_2701 SM01059 Chloramphenicol acetyltransferase SYNPCCP_2704 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SYNPCCP_2704 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) SYNPCCP_2704 SM00091 PAS domain SYNPCCP_2704 SM00267 diguanylate cyclase SYNPCCP_2712 SM00729 Elongator protein 3, MiaB family, Radical SAM SYNPCCP_2716 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) SYNPCCP_2716 SM00091 PAS domain SYNPCCP_2716 SM00387 Histidine kinase-like ATPases SYNPCCP_2717 SM00421 helix_turn_helix, Lux Regulon SYNPCCP_2717 SM00448 cheY-homologous receiver domain SYNPCCP_2720 SM00822 SYNPCCP_2720 SYNPCCP_2732 SM00387 Histidine kinase-like ATPases SYNPCCP_2732 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCP_2733 SM00448 cheY-homologous receiver domain SYNPCCP_2733 SM00862 Transcriptional regulatory protein, C terminal SYNPCCP_2738 SM00422 helix_turn_helix, mercury resistance SYNPCCP_2741 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor SYNPCCP_2743 SM00387 Histidine kinase-like ATPases SYNPCCP_2743 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCP_2744 SM00448 cheY-homologous receiver domain SYNPCCP_2744 SM00862 Transcriptional regulatory protein, C terminal SYNPCCP_2751 SM00729 Elongator protein 3, MiaB family, Radical SAM SYNPCCP_2755 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SYNPCCP_2755 SM00421 helix_turn_helix, Lux Regulon SYNPCCP_2758 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) SYNPCCP_2758 SM00091 PAS domain SYNPCCP_2758 SM00267 diguanylate cyclase SYNPCCP_2759 SM00240 Forkhead associated domain SYNPCCP_2759 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_2761 SM00220 Serine/Threonine protein kinases, catalytic domain SYNPCCP_2761 SM00287 Bacterial SH3 domain homologues SYNPCCP_2765 SM01118 SYNPCCP_2765 SYNPCCP_2768 SM00422 helix_turn_helix, mercury resistance SYNPCCP_2779 SM00831 Cation transporter/ATPase, N-terminus SYNPCCP_2783 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs SYNPCCP_2783 SM00474 3'-5' exonuclease SYNPCCP_2783 SM00475 5'-3' exonuclease SYNPCCP_2783 SM00482 DNA polymerase A domain SYNPCCP_2789 SM00465 GIY-YIG type nucleases (URI domain) SYNPCCP_2791 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SYNPCCP_2809 SM00890 Domain of unknown function SYNPCCP_2811 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_2814 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SYNPCCP_2814 SM00267 diguanylate cyclase SYNPCCP_2819 SM00260 Two component signalling adaptor domain SYNPCCP_2820 SM00073 Histidine Phosphotransfer domain SYNPCCP_2820 SM00260 Two component signalling adaptor domain SYNPCCP_2820 SM00387 Histidine kinase-like ATPases SYNPCCP_2820 SM00448 cheY-homologous receiver domain SYNPCCP_2820 SM01231 SYNPCCP_2820 SYNPCCP_2821 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). SYNPCCP_2822 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SYNPCCP_2822 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). SYNPCCP_2822 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SYNPCCP_2823 SM00260 Two component signalling adaptor domain SYNPCCP_2824 SM00448 cheY-homologous receiver domain SYNPCCP_2825 SM00448 cheY-homologous receiver domain SYNPCCP_2826 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. SYNPCCP_2830 SM00046 Diacylglycerol kinase catalytic domain (presumed) SYNPCCP_2830 SM00851 MGS-like domain SYNPCCP_2841 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_2842 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_2846 SM00360 RNA recognition motif SYNPCCP_2851 SM00849 Metallo-beta-lactamase superfamily SYNPCCP_2856 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SYNPCCP_2856 SM00387 Histidine kinase-like ATPases SYNPCCP_2856 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCP_2868 SM00836 DALR anticodon binding domain SYNPCCP_2868 SM01016 Arginyl tRNA synthetase N terminal dom SYNPCCP_2873 SM00028 Tetratricopeptide repeats SYNPCCP_2874 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_2883 SM01001 AIR carboxylase SYNPCCP_2887 SM00962 SRP54-type protein, GTPase domain SYNPCCP_2895 SM00271 DnaJ molecular chaperone homology domain SYNPCCP_2901 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_2901 SM00994 ClpX C4-type zinc finger SYNPCCP_2901 SM01086 C-terminal, D2-small domain, of ClpB protein SYNPCCP_2904 SM00859 Semialdehyde dehydrogenase, NAD binding domain SYNPCCP_2905 SM01130 SYNPCCP_2905 SYNPCCP_2906 SM00849 Metallo-beta-lactamase superfamily SYNPCCP_2910 SM00861 Transketolase, pyrimidine binding domain SYNPCCP_2911 SM00116 Domain in cystathionine beta-synthase and other proteins. SYNPCCP_2915 SM00897 FIST N domain SYNPCCP_2915 SM01204 SYNPCCP_2915 SYNPCCP_2926 SM00567 E-Z type HEAT repeats SYNPCCP_2927 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SYNPCCP_2933 SM00493 SYNPCCP_2933 SYNPCCP_2937 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SYNPCCP_2937 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCP_2941 SM00448 cheY-homologous receiver domain SYNPCCP_2941 SM00862 Transcriptional regulatory protein, C terminal SYNPCCP_2946 SM00930 SYNPCCP_2946 SYNPCCP_2949 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_2953 SM00487 DEAD-like helicases superfamily SYNPCCP_2953 SM00490 helicase superfamily c-terminal domain SYNPCCP_2955 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SYNPCCP_2955 SM00331 Sigma factor PP2C-like phosphatases SYNPCCP_2957 SM00838 Elongation factor G C-terminus SYNPCCP_2957 SM00889 Elongation factor G, domain IV SYNPCCP_2971 SM00255 Toll - interleukin 1 - resistance SYNPCCP_2989 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain SYNPCCP_3000 SM00320 WD40 repeats SYNPCCP_3003 SM01001 AIR carboxylase SYNPCCP_3010 SM00100 Cyclic nucleotide-monophosphate binding domain SYNPCCP_3017 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. SYNPCCP_3024 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SYNPCCP_3024 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) SYNPCCP_3024 SM00091 PAS domain SYNPCCP_3024 SM00387 Histidine kinase-like ATPases SYNPCCP_3024 SM00388 His Kinase A (phosphoacceptor) domain SYNPCCP_3027 SM00448 cheY-homologous receiver domain SYNPCCP_3027 SM00862 Transcriptional regulatory protein, C terminal SYNPCCP_3031 SM00052 Putative diguanylate phosphodiesterase SYNPCCP_3031 SM00448 cheY-homologous receiver domain SYNPCCP_3033 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_3040 SM00028 Tetratricopeptide repeats SYNPCCP_3041 SM01192 SYNPCCP_3041 SYNPCCP_3041 SM01193 SYNPCCP_3041 SYNPCCP_3052 SM01247 SYNPCCP_3052 SYNPCCP_3053 SM01248 SYNPCCP_3053 SYNPCCP_3060 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_3068 SM00267 diguanylate cyclase SYNPCCP_3072 SM00732 Likely ribonuclease with RNase H fold. SYNPCCP_3080 SM00421 helix_turn_helix, Lux Regulon SYNPCCP_3081 SM00670 Large family of predicted nucleotide-binding domains SYNPCCP_3088 SM00100 Cyclic nucleotide-monophosphate binding domain SYNPCCP_3088 SM00419 helix_turn_helix, cAMP Regulatory protein SYNPCCP_3096 SM00487 DEAD-like helicases superfamily SYNPCCP_3096 SM00490 helicase superfamily c-terminal domain SYNPCCP_3096 SM01142 SYNPCCP_3096 SYNPCCP_3098 SM00465 GIY-YIG type nucleases (URI domain) SYNPCCP_3113 SM00387 Histidine kinase-like ATPases SYNPCCP_3116 SM00287 Bacterial SH3 domain homologues SYNPCCP_3118 SM00937 SYNPCCP_3118 SYNPCCP_3124 SM00450 Rhodanese Homology Domain SYNPCCP_3132 SM00829 Enoylreductase SYNPCCP_3142 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_3148 SM00100 Cyclic nucleotide-monophosphate binding domain SYNPCCP_3149 SM00382 ATPases associated with a variety of cellular activities SYNPCCP_3153 SM00798 AICARFT/IMPCHase bienzyme SYNPCCP_3153 SM00851 MGS-like domain SYNPCCP_3157 SM00220 Serine/Threonine protein kinases, catalytic domain SYNPCCP_3162 SM00306 Hint (Hedgehog/Intein) domain N-terminal region SYNPCCP_3162 SM00481 DNA polymerase alpha chain like domain SYNPCCP_3163 SM00838 Elongation factor G C-terminus SYNPCCP_3166 SM00100 Cyclic nucleotide-monophosphate binding domain SYNPCCP_3168 SM00833 Cobalamin synthesis protein cobW C-terminal domain