locus-tag class description IQE94_00010 PF00890 FAD binding domain IQE94_00010 PF02910 Fumarate reductase flavoprotein C-term IQE94_00015 PF00977 Histidine biosynthesis protein IQE94_00020 PF14251 Domain of unknown function (DUF4346) IQE94_00025 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain IQE94_00025 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain IQE94_00030 PF01106 NifU-like domain IQE94_00040 PF04055 Radical SAM superfamily IQE94_00045 PF03144 Elongation factor Tu domain 2 IQE94_00045 PF00009 Elongation factor Tu GTP binding domain IQE94_00045 PF00679 Elongation factor G C-terminus IQE94_00045 PF14492 Elongation Factor G, domain II IQE94_00045 PF03764 Elongation factor G, domain IV IQE94_00055 PF00815 Histidinol dehydrogenase IQE94_00060 PF02575 YbaB/EbfC DNA-binding family IQE94_00065 PF00462 Glutaredoxin IQE94_00070 PF01722 BolA-like protein IQE94_00080 PF02533 Photosystem II 4 kDa reaction centre component IQE94_00090 PF02511 Thymidylate synthase complementing protein IQE94_00105 PF16363 GDP-mannose 4,6 dehydratase IQE94_00115 PF10792 Protein of unknown function (DUF2605) IQE94_00120 PF04485 Phycobilisome degradation protein nblA IQE94_00125 PF04485 Phycobilisome degradation protein nblA IQE94_00135 PF00542 Ribosomal protein L7/L12 C-terminal domain IQE94_00135 PF16320 Ribosomal protein L7/L12 dimerisation domain IQE94_00145 PF04960 Glutaminase IQE94_00160 PF02153 Prephenate dehydrogenase IQE94_00165 PF00115 Cytochrome C and Quinol oxidase polypeptide I IQE94_00170 PF00510 Cytochrome c oxidase subunit III IQE94_00180 PF01430 Hsp33 protein IQE94_00185 PF00141 Peroxidase IQE94_00190 PF05140 ResB-like family IQE94_00200 PF00924 Mechanosensitive ion channel IQE94_00215 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IQE94_00215 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IQE94_00215 PF00205 Thiamine pyrophosphate enzyme, central domain IQE94_00230 PF00155 Aminotransferase class I and II IQE94_00235 PF00285 Citrate synthase, C-terminal domain IQE94_00240 PF00300 Histidine phosphatase superfamily (branch 1) IQE94_00245 PF12697 Alpha/beta hydrolase family IQE94_00250 PF16653 Saccharopine dehydrogenase C-terminal domain IQE94_00250 PF03435 Saccharopine dehydrogenase NADP binding domain IQE94_00260 PF12706 Beta-lactamase superfamily domain IQE94_00280 PF01842 ACT domain IQE94_00280 PF00551 Formyl transferase IQE94_00285 PF00484 Carbonic anhydrase IQE94_00300 PF00043 Glutathione S-transferase, C-terminal domain IQE94_00300 PF02798 Glutathione S-transferase, N-terminal domain IQE94_00310 PF10369 Small subunit of acetolactate synthase IQE94_00320 PF02130 Uncharacterized protein family UPF0054 IQE94_00325 PF01219 Prokaryotic diacylglycerol kinase IQE94_00330 PF00117 Glutamine amidotransferase class-I IQE94_00335 PF01040 UbiA prenyltransferase family IQE94_00350 PF01594 AI-2E family transporter IQE94_00385 PF01594 AI-2E family transporter IQE94_00390 PF00012 Hsp70 protein IQE94_00395 PF01025 GrpE IQE94_00405 PF02926 THUMP domain IQE94_00405 PF01170 Putative RNA methylase family UPF0020 IQE94_00415 PF00448 SRP54-type protein, GTPase domain IQE94_00415 PF02881 SRP54-type protein, helical bundle domain IQE94_00425 PF02660 Glycerol-3-phosphate acyltransferase IQE94_00435 PF01701 Photosystem I reaction centre subunit IX / PsaJ IQE94_00440 PF02507 Photosystem I reaction centre subunit III IQE94_00445 PF00814 Glycoprotease family IQE94_00450 PF01782 RimM N-terminal domain IQE94_00450 PF05239 PRC-barrel domain IQE94_00455 PF16363 GDP-mannose 4,6 dehydratase IQE94_00465 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IQE94_00480 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IQE94_00480 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IQE94_00490 PF00116 Cytochrome C oxidase subunit II, periplasmic domain IQE94_00490 PF02790 Cytochrome C oxidase subunit II, transmembrane domain IQE94_00495 PF03309 Type III pantothenate kinase IQE94_00510 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IQE94_00515 PF10415 Fumarase C C-terminus IQE94_00515 PF00206 Lyase IQE94_00540 PF02401 LytB protein IQE94_00555 PF00571 CBS domain IQE94_00555 PF01595 Cyclin M transmembrane N-terminal domain IQE94_00565 PF04244 Deoxyribodipyrimidine photo-lyase-related protein IQE94_00570 PF00571 CBS domain IQE94_00570 PF01743 Poly A polymerase head domain IQE94_00580 PF02405 Permease MlaE IQE94_00585 PF13546 DDE superfamily endonuclease IQE94_00605 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system IQE94_00620 PF13546 DDE superfamily endonuclease IQE94_00635 PF01694 Rhomboid family IQE94_00640 PF12419 SNF2 Helicase protein IQE94_00640 PF00271 Helicase conserved C-terminal domain IQE94_00640 PF00176 SNF2 family N-terminal domain IQE94_00645 PF00502 Phycobilisome protein IQE94_00650 PF02417 Chromate transporter IQE94_00660 PF00005 ABC transporter IQE94_00660 PF08402 TOBE domain IQE94_00665 PF00528 Binding-protein-dependent transport system inner membrane component IQE94_00670 PF00528 Binding-protein-dependent transport system inner membrane component IQE94_00675 PF09383 NIL domain IQE94_00695 PF00459 Inositol monophosphatase family IQE94_00700 PF00072 Response regulator receiver domain IQE94_00700 PF00486 Transcriptional regulatory protein, C terminal IQE94_00720 PF04434 SWIM zinc finger IQE94_00730 PF11987 Translation-initiation factor 2 IQE94_00730 PF03144 Elongation factor Tu domain 2 IQE94_00730 PF00009 Elongation factor Tu GTP binding domain IQE94_00745 PF02132 RecR protein IQE94_00745 PF13662 Toprim domain IQE94_00755 PF00210 Ferritin-like domain IQE94_00765 PF01565 FAD binding domain IQE94_00765 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain IQE94_00770 PF01225 Mur ligase family, catalytic domain IQE94_00770 PF08245 Mur ligase middle domain IQE94_00770 PF02875 Mur ligase family, glutamate ligase domain IQE94_00775 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IQE94_00775 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IQE94_00780 PF01433 Peptidase family M1 domain IQE94_00805 PF00421 Photosystem II protein IQE94_00855 PF00155 Aminotransferase class I and II IQE94_00860 PF00557 Metallopeptidase family M24 IQE94_00870 PF00677 Lumazine binding domain IQE94_00885 PF00528 Binding-protein-dependent transport system inner membrane component IQE94_00890 PF01451 Low molecular weight phosphotyrosine protein phosphatase IQE94_00895 PF00480 ROK family IQE94_00915 PF00196 Bacterial regulatory proteins, luxR family IQE94_00915 PF00072 Response regulator receiver domain IQE94_00920 PF12838 4Fe-4S dicluster domain IQE94_00930 PF00361 Proton-conducting membrane transporter IQE94_00945 PF00427 Phycobilisome Linker polypeptide IQE94_00945 PF00502 Phycobilisome protein IQE94_00980 PF01926 50S ribosome-binding GTPase IQE94_00980 PF12631 MnmE helical domain IQE94_00980 PF10396 GTP-binding protein TrmE N-terminus IQE94_00985 PF01716 Manganese-stabilising protein / photosystem II polypeptide IQE94_01005 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IQE94_01015 PF04055 Radical SAM superfamily IQE94_01015 PF01938 TRAM domain IQE94_01015 PF00919 Uncharacterized protein family UPF0004 IQE94_01035 PF01112 Asparaginase IQE94_01040 PF10397 Adenylosuccinate lyase C-terminus IQE94_01040 PF00206 Lyase IQE94_01045 PF00699 Urease beta subunit IQE94_01050 PF08241 Methyltransferase domain IQE94_01055 PF09115 DNA polymerase III, delta subunit, C terminal IQE94_01080 PF13546 DDE superfamily endonuclease IQE94_01085 PF00999 Sodium/hydrogen exchanger family IQE94_01095 PF01029 NusB family IQE94_01120 PF02463 RecF/RecN/SMC N terminal domain IQE94_01140 PF00270 DEAD/DEAH box helicase IQE94_01140 PF00271 Helicase conserved C-terminal domain IQE94_01140 PF17764 3′ DNA-binding domain (3′BD) IQE94_01140 PF18074 Primosomal protein N C-terminal domain IQE94_01140 PF18319 PriA DNA helicase Cys-rich region (CRR) domain IQE94_01155 PF00563 EAL domain IQE94_01155 PF00990 Diguanylate cyclase, GGDEF domain IQE94_01155 PF03707 Bacterial signalling protein N terminal repeat IQE94_01170 PF00355 Rieske [2Fe-2S] domain IQE94_01180 PF00487 Fatty acid desaturase IQE94_01185 PF02254 TrkA-N domain IQE94_01185 PF02080 TrkA-C domain IQE94_01190 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV IQE94_01205 PF00571 CBS domain IQE94_01205 PF03471 Transporter associated domain IQE94_01205 PF01595 Cyclin M transmembrane N-terminal domain IQE94_01210 PF00886 Ribosomal protein S16 IQE94_01220 PF12437 Glutamine synthetase type III N terminal IQE94_01220 PF00120 Glutamine synthetase, catalytic domain IQE94_01220 PF18318 Glutamine synthetase C-terminal domain IQE94_01225 PF00144 Beta-lactamase IQE94_01230 PF14495 Cytochrome c-550 domain IQE94_01245 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE IQE94_01250 PF02347 Glycine cleavage system P-protein IQE94_01255 PF02463 RecF/RecN/SMC N terminal domain IQE94_01285 PF02514 CobN/Magnesium Chelatase IQE94_01285 PF11965 Domain of unknown function (DUF3479) IQE94_01320 PF00291 Pyridoxal-phosphate dependent enzyme IQE94_01325 PF00574 Clp protease IQE94_01330 PF00117 Glutamine amidotransferase class-I IQE94_01330 PF00958 GMP synthase C terminal domain IQE94_01330 PF02540 NAD synthase IQE94_01335 PF00535 Glycosyl transferase family 2 IQE94_01340 PF03485 Arginyl tRNA synthetase N terminal domain IQE94_01340 PF00750 tRNA synthetases class I (R) IQE94_01340 PF05746 DALR anticodon binding domain IQE94_01345 PF01926 50S ribosome-binding GTPase IQE94_01345 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal IQE94_01350 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain IQE94_01350 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain IQE94_01360 PF01255 Putative undecaprenyl diphosphate synthase IQE94_01365 PF01544 CorA-like Mg2+ transporter protein IQE94_01375 PF13546 DDE superfamily endonuclease IQE94_01395 PF00692 dUTPase IQE94_01400 PF01699 Sodium/calcium exchanger protein IQE94_01410 PF00318 Ribosomal protein S2 IQE94_01420 PF00889 Elongation factor TS IQE94_01425 PF11909 NADH-quinone oxidoreductase cyanobacterial subunit N IQE94_01430 PF16916 Dimerisation domain of Zinc Transporter IQE94_01430 PF01545 Cation efflux family IQE94_01445 PF01926 50S ribosome-binding GTPase IQE94_01445 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal IQE94_01460 PF00690 Cation transporter/ATPase, N-terminus IQE94_01460 PF00689 Cation transporting ATPase, C-terminus IQE94_01465 PF00834 Ribulose-phosphate 3 epimerase family IQE94_01470 PF02597 ThiS family IQE94_01515 PF07963 Prokaryotic N-terminal methylation motif IQE94_01515 PF08334 Type II secretion system (T2SS), protein G IQE94_01520 PF07963 Prokaryotic N-terminal methylation motif IQE94_01520 PF14245 Type IV pilin PilA IQE94_01535 PF00805 Pentapeptide repeats (8 copies) IQE94_01540 PF04542 Sigma-70 region 2 IQE94_01540 PF04539 Sigma-70 region 3 IQE94_01540 PF04545 Sigma-70, region 4 IQE94_01540 PF00140 Sigma-70 factor, region 1.2 IQE94_01545 PF00291 Pyridoxal-phosphate dependent enzyme IQE94_01555 PF00072 Response regulator receiver domain IQE94_01555 PF00990 Diguanylate cyclase, GGDEF domain IQE94_01560 PF07694 5TMR of 5TMR-LYT IQE94_01560 PF00990 Diguanylate cyclase, GGDEF domain IQE94_01565 PF02163 Peptidase family M50 IQE94_01565 PF13180 PDZ domain IQE94_01570 PF00730 HhH-GPD superfamily base excision DNA repair protein IQE94_01570 PF00633 Helix-hairpin-helix motif IQE94_01580 PF14437 MafB19-like deaminase IQE94_01590 PF00875 DNA photolyase IQE94_01590 PF03441 FAD binding domain of DNA photolyase IQE94_01605 PF01471 Putative peptidoglycan binding domain IQE94_01605 PF10128 Glucose-6-phosphate dehydrogenase subunit IQE94_01610 PF00005 ABC transporter IQE94_01615 PF00717 Peptidase S24-like IQE94_01615 PF01726 LexA DNA binding domain IQE94_01620 PF13085 2Fe-2S iron-sulfur cluster binding domain IQE94_01640 PF00873 AcrB/AcrD/AcrF family IQE94_01650 PF00072 Response regulator receiver domain IQE94_01650 PF00486 Transcriptional regulatory protein, C terminal IQE94_01655 PF00512 His Kinase A (phospho-acceptor) domain IQE94_01655 PF16736 Single Cache-like IQE94_01655 PF00989 PAS fold IQE94_01655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IQE94_01665 PF00873 AcrB/AcrD/AcrF family IQE94_01680 PF00072 Response regulator receiver domain IQE94_01680 PF00486 Transcriptional regulatory protein, C terminal IQE94_01695 PF00072 Response regulator receiver domain IQE94_01700 PF00005 ABC transporter IQE94_01705 PF01040 UbiA prenyltransferase family IQE94_01725 PF01493 GXGXG motif IQE94_01725 PF04898 Glutamate synthase central domain IQE94_01725 PF01645 Conserved region in glutamate synthase IQE94_01725 PF00310 Glutamine amidotransferases class-II IQE94_01740 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase IQE94_01745 PF00583 Acetyltransferase (GNAT) family IQE94_01760 PF00805 Pentapeptide repeats (8 copies) IQE94_01775 PF01618 MotA/TolQ/ExbB proton channel family IQE94_01785 PF02472 Biopolymer transport protein ExbD/TolR IQE94_01790 PF01042 Endoribonuclease L-PSP IQE94_01795 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase IQE94_01795 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain IQE94_01800 PF14489 QueF-like protein IQE94_01805 PF03706 Lysylphosphatidylglycerol synthase TM region IQE94_01830 PF04166 Pyridoxal phosphate biosynthetic protein PdxA IQE94_01835 PF08041 PetM family of cytochrome b6f complex subunit 7 IQE94_01840 PF01702 Queuine tRNA-ribosyltransferase IQE94_01860 PF03683 Uncharacterised protein family (UPF0175) IQE94_01865 PF00953 Glycosyl transferase family 4 IQE94_01865 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 IQE94_01870 PF00924 Mechanosensitive ion channel IQE94_01875 PF00365 Phosphofructokinase IQE94_01890 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IQE94_01890 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase IQE94_01890 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II IQE94_01890 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg IQE94_01890 PF10371 Domain of unknown function IQE94_01900 PF00005 ABC transporter IQE94_01920 PF05969 Photosystem II complex subunit Ycf12 IQE94_01930 PF00534 Glycosyl transferases group 1 IQE94_01930 PF00862 Sucrose synthase IQE94_01945 PF01584 CheW-like domain IQE94_01945 PF02895 Signal transducing histidine kinase, homodimeric domain IQE94_01945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IQE94_01945 PF01627 Hpt domain IQE94_01945 PF00072 Response regulator receiver domain IQE94_01950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IQE94_01955 PF01590 GAF domain IQE94_01955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IQE94_01965 PF00072 Response regulator receiver domain IQE94_01970 PF14332 Domain of unknown function (DUF4388) IQE94_01970 PF00072 Response regulator receiver domain IQE94_01980 PF01063 Amino-transferase class IV IQE94_01985 PF02686 Glu-tRNAGln amidotransferase C subunit IQE94_01990 PF01903 CbiX IQE94_01995 PF00781 Diacylglycerol kinase catalytic domain IQE94_01995 PF02142 MGS-like domain IQE94_02000 PF00155 Aminotransferase class I and II IQE94_02045 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system IQE94_02085 PF18317 Shikimate 5'-dehydrogenase C-terminal domain IQE94_02085 PF01488 Shikimate / quinate 5-dehydrogenase IQE94_02085 PF08501 Shikimate dehydrogenase substrate binding domain IQE94_02130 PF07085 DRTGG domain IQE94_02135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IQE94_02135 PF03466 LysR substrate binding domain IQE94_02145 PF00528 Binding-protein-dependent transport system inner membrane component IQE94_02150 PF04966 Carbohydrate-selective porin, OprB family IQE94_02155 PF00005 ABC transporter IQE94_02160 PF00005 ABC transporter IQE94_02175 PF00205 Thiamine pyrophosphate enzyme, central domain IQE94_02175 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IQE94_02175 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IQE94_02200 PF13546 DDE superfamily endonuclease IQE94_02220 PF00708 Acylphosphatase IQE94_02220 PF07503 HypF finger IQE94_02220 PF01300 Telomere recombination IQE94_02220 PF17788 HypF Kae1-like domain IQE94_02225 PF14622 Ribonuclease-III-like IQE94_02225 PF00035 Double-stranded RNA binding motif IQE94_02240 PF00534 Glycosyl transferases group 1 IQE94_02240 PF13439 Glycosyltransferase Family 4 IQE94_02245 PF00032 Cytochrome b(C-terminal)/b6/petD IQE94_02250 PF00033 Cytochrome b/b6/petB IQE94_02265 PF01594 AI-2E family transporter IQE94_02270 PF00121 Triosephosphate isomerase IQE94_02280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IQE94_02280 PF07689 KaiB domain IQE94_02280 PF00512 His Kinase A (phospho-acceptor) domain IQE94_02285 PF01593 Flavin containing amine oxidoreductase IQE94_02295 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain IQE94_02295 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain IQE94_02305 PF02033 Ribosome-binding factor A IQE94_02310 PF10417 C-terminal domain of 1-Cys peroxiredoxin IQE94_02310 PF00578 AhpC/TSA family IQE94_02320 PF03477 ATP cone domain IQE94_02325 PF01405 Photosystem II reaction centre T protein IQE94_02330 PF00156 Phosphoribosyl transferase domain IQE94_02340 PF00005 ABC transporter IQE94_02360 PF00005 ABC transporter IQE94_02360 PF12399 Branched-chain amino acid ATP-binding cassette transporter IQE94_02370 PF02785 Biotin carboxylase C-terminal domain IQE94_02370 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IQE94_02370 PF00289 Biotin carboxylase, N-terminal domain IQE94_02390 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IQE94_02395 PF00551 Formyl transferase IQE94_02395 PF02911 Formyl transferase, C-terminal domain IQE94_02405 PF00551 Formyl transferase IQE94_02405 PF02911 Formyl transferase, C-terminal domain IQE94_02410 PF12399 Branched-chain amino acid ATP-binding cassette transporter IQE94_02410 PF00005 ABC transporter IQE94_02415 PF00163 Ribosomal protein S4/S9 N-terminal domain IQE94_02415 PF01479 S4 domain IQE94_02430 PF00171 Aldehyde dehydrogenase family IQE94_02435 PF00512 His Kinase A (phospho-acceptor) domain IQE94_02435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IQE94_02435 PF01590 GAF domain IQE94_02435 PF08446 PAS fold IQE94_02435 PF00360 Phytochrome region IQE94_02440 PF00072 Response regulator receiver domain IQE94_02445 PF02310 B12 binding domain IQE94_02445 PF04055 Radical SAM superfamily IQE94_02450 PF01180 Dihydroorotate dehydrogenase IQE94_02455 PF00146 NADH dehydrogenase IQE94_02460 PF13237 4Fe-4S dicluster domain IQE94_02465 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 IQE94_02470 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L IQE94_02475 PF12323 Helix-turn-helix domain IQE94_02475 PF01385 Probable transposase IQE94_02475 PF07282 Putative transposase DNA-binding domain IQE94_02480 PF08264 Anticodon-binding domain of tRNA IQE94_02480 PF00133 tRNA synthetases class I (I, L, M and V) IQE94_02480 PF10458 Valyl tRNA synthetase tRNA binding arm IQE94_02485 PF08495 FIST N domain IQE94_02485 PF10442 FIST C domain IQE94_02495 PF00709 Adenylosuccinate synthetase IQE94_02500 PF01386 Ribosomal L25p family IQE94_02510 PF00210 Ferritin-like domain IQE94_02525 PF00550 Phosphopantetheine attachment site IQE94_02530 PF00109 Beta-ketoacyl synthase, N-terminal domain IQE94_02530 PF02801 Beta-ketoacyl synthase, C-terminal domain IQE94_02535 PF02779 Transketolase, pyrimidine binding domain IQE94_02535 PF02780 Transketolase, C-terminal domain IQE94_02535 PF00456 Transketolase, thiamine diphosphate binding domain IQE94_02545 PF03480 Bacterial extracellular solute-binding protein, family 7 IQE94_02550 PF00498 FHA domain IQE94_02550 PF00990 Diguanylate cyclase, GGDEF domain IQE94_02550 PF00563 EAL domain IQE94_02555 PF02136 Nuclear transport factor 2 (NTF2) domain IQE94_02555 PF09150 Orange carotenoid protein, N-terminal IQE94_02560 PF18032 Photoprotection regulator fluorescence recovery protein IQE94_02565 PF00925 GTP cyclohydrolase II IQE94_02565 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase IQE94_02575 PF00977 Histidine biosynthesis protein IQE94_02580 PF02696 Uncharacterized ACR, YdiU/UPF0061 family IQE94_02585 PF02416 mttA/Hcf106 family IQE94_02590 PF13439 Glycosyltransferase Family 4 IQE94_02610 PF04542 Sigma-70 region 2 IQE94_02610 PF08281 Sigma-70, region 4 IQE94_02645 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family IQE94_02650 PF01888 CbiD IQE94_02655 PF00535 Glycosyl transferase family 2 IQE94_02660 PF16124 RecQ zinc-binding IQE94_02660 PF00270 DEAD/DEAH box helicase IQE94_02660 PF00271 Helicase conserved C-terminal domain IQE94_02675 PF00216 Bacterial DNA-binding protein IQE94_02680 PF00155 Aminotransferase class I and II IQE94_02685 PF01758 Sodium Bile acid symporter family IQE94_02690 PF00924 Mechanosensitive ion channel IQE94_02695 PF00924 Mechanosensitive ion channel IQE94_02700 PF08241 Methyltransferase domain IQE94_02715 PF13368 Topoisomerase C-terminal repeat IQE94_02715 PF01751 Toprim domain IQE94_02715 PF01131 DNA topoisomerase IQE94_02720 PF00230 Major intrinsic protein IQE94_02725 PF01022 Bacterial regulatory protein, arsR family IQE94_02730 PF00155 Aminotransferase class I and II IQE94_02735 PF00459 Inositol monophosphatase family IQE94_02745 PF00392 Bacterial regulatory proteins, gntR family IQE94_02745 PF07702 UTRA domain IQE94_02760 PF01925 Sulfite exporter TauE/SafE IQE94_02765 PF00581 Rhodanese-like domain IQE94_02765 PF11127 Protein of unknown function (DUF2892) IQE94_02775 PF00753 Metallo-beta-lactamase superfamily IQE94_02775 PF16123 Hydroxyacylglutathione hydrolase C-terminus IQE94_02785 PF02254 TrkA-N domain IQE94_02785 PF07885 Ion channel IQE94_02795 PF00547 Urease, gamma subunit IQE94_02800 PF01124 MAPEG family IQE94_02810 PF01593 Flavin containing amine oxidoreductase IQE94_02840 PF01329 Pterin 4 alpha carbinolamine dehydratase IQE94_02845 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IQE94_02855 PF00128 Alpha amylase, catalytic domain IQE94_02855 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) IQE94_02855 PF02806 Alpha amylase, C-terminal all-beta domain IQE94_02875 PF01933 Uncharacterised protein family UPF0052 IQE94_02880 PF00682 HMGL-like IQE94_02880 PF08502 LeuA allosteric (dimerisation) domain IQE94_02905 PF13546 DDE superfamily endonuclease IQE94_02935 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) IQE94_02940 PF01479 S4 domain IQE94_02940 PF00849 RNA pseudouridylate synthase IQE94_02955 PF02532 Photosystem II reaction centre I protein (PSII 4.8 kDa protein) IQE94_02970 PF00873 AcrB/AcrD/AcrF family IQE94_02975 PF00171 Aldehyde dehydrogenase family IQE94_02980 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase IQE94_02995 PF04966 Carbohydrate-selective porin, OprB family IQE94_03000 PF00486 Transcriptional regulatory protein, C terminal IQE94_03000 PF00072 Response regulator receiver domain IQE94_03005 PF04122 Putative cell wall binding repeat 2 IQE94_03005 PF01520 N-acetylmuramoyl-L-alanine amidase IQE94_03055 PF12697 Alpha/beta hydrolase family IQE94_03060 PF12697 Alpha/beta hydrolase family IQE94_03075 PF03793 PASTA domain IQE94_03075 PF03717 Penicillin-binding Protein dimerisation domain IQE94_03075 PF00905 Penicillin binding protein transpeptidase domain IQE94_03085 PF02754 Cysteine-rich domain IQE94_03085 PF13183 4Fe-4S dicluster domain IQE94_03095 PF03109 ABC1 family IQE94_03100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IQE94_03100 PF03466 LysR substrate binding domain IQE94_03110 PF02567 Phenazine biosynthesis-like protein IQE94_03120 PF13335 Magnesium chelatase, subunit ChlI C-terminal IQE94_03120 PF01078 Magnesium chelatase, subunit ChlI IQE94_03130 PF02391 MoaE protein IQE94_03140 PF01967 MoaC family IQE94_03140 PF12804 MobA-like NTP transferase domain IQE94_03145 PF06463 Molybdenum Cofactor Synthesis C IQE94_03145 PF04055 Radical SAM superfamily IQE94_03150 PF03454 MoeA C-terminal region (domain IV) IQE94_03150 PF00994 Probable molybdopterin binding domain IQE94_03150 PF03453 MoeA N-terminal region (domain I and II) IQE94_03155 PF02560 Cyanate lyase C-terminal domain IQE94_03160 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain IQE94_03160 PF01077 Nitrite and sulphite reductase 4Fe-4S domain IQE94_03165 PF07697 7TM-HD extracellular IQE94_03165 PF07698 7TM receptor with intracellular HD hydrolase IQE94_03165 PF01966 HD domain IQE94_03175 PF01081 KDPG and KHG aldolase IQE94_03180 PF00909 Ammonium Transporter Family IQE94_03185 PF00990 Diguanylate cyclase, GGDEF domain IQE94_03185 PF03707 Bacterial signalling protein N terminal repeat IQE94_03185 PF00563 EAL domain IQE94_03210 PF11805 Protein of unknown function (DUF3326) IQE94_03215 PF02517 CPBP intramembrane metalloprotease IQE94_03225 PF01594 AI-2E family transporter IQE94_03240 PF00694 Aconitase C-terminal domain IQE94_03245 PF00117 Glutamine amidotransferase class-I IQE94_03245 PF06418 CTP synthase N-terminus IQE94_03260 PF02954 Bacterial regulatory protein, Fis family IQE94_03260 PF00158 Sigma-54 interaction domain IQE94_03260 PF00072 Response regulator receiver domain IQE94_03265 PF00487 Fatty acid desaturase IQE94_03270 PF01243 Pyridoxamine 5'-phosphate oxidase IQE94_03270 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region IQE94_03285 PF02881 SRP54-type protein, helical bundle domain IQE94_03285 PF00448 SRP54-type protein, GTPase domain IQE94_03285 PF02978 Signal peptide binding domain IQE94_03295 PF08245 Mur ligase middle domain IQE94_03295 PF02875 Mur ligase family, glutamate ligase domain IQE94_03305 PF00690 Cation transporter/ATPase, N-terminus IQE94_03305 PF00689 Cation transporting ATPase, C-terminus IQE94_03310 PF12631 MnmE helical domain IQE94_03310 PF01926 50S ribosome-binding GTPase IQE94_03310 PF10396 GTP-binding protein TrmE N-terminus IQE94_03315 PF13411 MerR HTH family regulatory protein IQE94_03320 PF00106 short chain dehydrogenase IQE94_03340 PF01758 Sodium Bile acid symporter family IQE94_03345 PF03358 NADPH-dependent FMN reductase IQE94_03350 PF01451 Low molecular weight phosphotyrosine protein phosphatase IQE94_03355 PF00486 Transcriptional regulatory protein, C terminal IQE94_03355 PF00072 Response regulator receiver domain IQE94_03410 PF13249 Squalene-hopene cyclase N-terminal domain IQE94_03410 PF13243 Squalene-hopene cyclase C-terminal domain IQE94_03425 PF13419 Haloacid dehalogenase-like hydrolase IQE94_03430 PF01509 TruB family pseudouridylate synthase (N terminal domain) IQE94_03445 PF00873 AcrB/AcrD/AcrF family IQE94_03460 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase IQE94_03460 PF09364 XFP N-terminal domain IQE94_03460 PF09363 XFP C-terminal domain IQE94_03485 PF00271 Helicase conserved C-terminal domain IQE94_03485 PF08148 DSHCT (NUC185) domain IQE94_03485 PF00270 DEAD/DEAH box helicase IQE94_03515 PF00474 Sodium:solute symporter family IQE94_03530 PF00255 Glutathione peroxidase IQE94_03535 PF01169 Uncharacterized protein family UPF0016 IQE94_03545 PF00465 Iron-containing alcohol dehydrogenase IQE94_03550 PF01494 FAD binding domain IQE94_03560 PF13546 DDE superfamily endonuclease IQE94_03565 PF00905 Penicillin binding protein transpeptidase domain IQE94_03575 PF00561 alpha/beta hydrolase fold IQE94_03580 PF12833 Helix-turn-helix domain IQE94_03585 PF00005 ABC transporter IQE94_03585 PF08402 TOBE domain IQE94_03590 PF08338 Domain of unknown function (DUF1731) IQE94_03590 PF01370 NAD dependent epimerase/dehydratase family IQE94_03595 PF02577 Bifunctional nuclease IQE94_03600 PF00580 UvrD/REP helicase N-terminal domain IQE94_03600 PF13361 UvrD-like helicase C-terminal domain IQE94_03615 PF05194 UreE urease accessory protein, C-terminal domain IQE94_03615 PF02814 UreE urease accessory protein, N-terminal domain IQE94_03625 PF01795 MraW methylase family IQE94_03635 PF00595 PDZ domain IQE94_03635 PF03572 Peptidase family S41 IQE94_03645 PF00091 Tubulin/FtsZ family, GTPase domain IQE94_03645 PF12327 FtsZ family, C-terminal domain IQE94_03650 PF03330 Lytic transglycolase IQE94_03660 PF00591 Glycosyl transferase family, a/b domain IQE94_03660 PF02885 Glycosyl transferase family, helical bundle domain IQE94_03670 PF00528 Binding-protein-dependent transport system inner membrane component IQE94_03675 PF00005 ABC transporter IQE94_03680 PF00005 ABC transporter IQE94_03685 PF08865 Domain of unknown function (DUF1830) IQE94_03690 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IQE94_03690 PF00384 Molybdopterin oxidoreductase IQE94_03690 PF01568 Molydopterin dinucleotide binding domain IQE94_03715 PF01336 OB-fold nucleic acid binding domain IQE94_03715 PF00152 tRNA synthetases class II (D, K and N) IQE94_03725 PF01327 Polypeptide deformylase IQE94_03730 PF01975 Survival protein SurE IQE94_03740 PF00586 AIR synthase related protein, N-terminal domain IQE94_03740 PF02769 AIR synthase related protein, C-terminal domain IQE94_03745 PF01434 Peptidase family M41 IQE94_03745 PF17862 AAA+ lid domain IQE94_03745 PF00004 ATPase family associated with various cellular activities (AAA) IQE94_03745 PF06480 FtsH Extracellular IQE94_03750 PF00005 ABC transporter IQE94_03760 PF01730 UreF IQE94_03765 PF00696 Amino acid kinase family IQE94_03775 PF13442 Cytochrome C oxidase, cbb3-type, subunit III IQE94_03795 PF00210 Ferritin-like domain IQE94_03800 PF00297 Ribosomal protein L3 IQE94_03805 PF00573 Ribosomal protein L4/L1 family IQE94_03810 PF00276 Ribosomal protein L23 IQE94_03815 PF00181 Ribosomal Proteins L2, RNA binding domain IQE94_03815 PF03947 Ribosomal Proteins L2, C-terminal domain IQE94_03820 PF00203 Ribosomal protein S19 IQE94_03825 PF00237 Ribosomal protein L22p/L17e IQE94_03830 PF07650 KH domain IQE94_03830 PF00189 Ribosomal protein S3, C-terminal domain IQE94_03835 PF00252 Ribosomal protein L16p/L10e IQE94_03840 PF00831 Ribosomal L29 protein IQE94_03845 PF00366 Ribosomal protein S17 IQE94_03850 PF00238 Ribosomal protein L14p/L23e IQE94_03855 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 IQE94_03855 PF00467 KOW motif IQE94_03860 PF00673 ribosomal L5P family C-terminus IQE94_03860 PF00281 Ribosomal protein L5 IQE94_03865 PF00410 Ribosomal protein S8 IQE94_03870 PF00347 Ribosomal protein L6 IQE94_03875 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast IQE94_03880 PF00333 Ribosomal protein S5, N-terminal domain IQE94_03880 PF03719 Ribosomal protein S5, C-terminal domain IQE94_03885 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A IQE94_03890 PF00344 SecY translocase IQE94_03900 PF01176 Translation initiation factor 1A / IF-1 IQE94_03905 PF00444 Ribosomal protein L36 IQE94_03910 PF00416 Ribosomal protein S13/S18 IQE94_03915 PF00411 Ribosomal protein S11 IQE94_03920 PF01000 RNA polymerase Rpb3/RpoA insert domain IQE94_03920 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain IQE94_03920 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain IQE94_03925 PF01196 Ribosomal protein L17 IQE94_03930 PF01416 tRNA pseudouridine synthase IQE94_03935 PF00572 Ribosomal protein L13 IQE94_03940 PF00380 Ribosomal protein S9/S16 IQE94_03945 PF01197 Ribosomal protein L31 IQE94_03960 PF03109 ABC1 family IQE94_03965 PF16736 Single Cache-like IQE94_03965 PF00989 PAS fold IQE94_03965 PF00512 His Kinase A (phospho-acceptor) domain IQE94_03965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IQE94_03970 PF13614 AAA domain IQE94_03985 PF00486 Transcriptional regulatory protein, C terminal IQE94_03985 PF00072 Response regulator receiver domain IQE94_03990 PF05996 Ferredoxin-dependent bilin reductase IQE94_04000 PF02628 Cytochrome oxidase assembly protein IQE94_04005 PF01040 UbiA prenyltransferase family IQE94_04010 PF01455 HupF/HypC family IQE94_04015 PF00132 Bacterial transferase hexapeptide (six repeats) IQE94_04035 PF04055 Radical SAM superfamily IQE94_04035 PF13282 Domain of unknown function (DUF4070) IQE94_04035 PF02310 B12 binding domain IQE94_04045 PF01281 Ribosomal protein L9, N-terminal domain IQE94_04045 PF03948 Ribosomal protein L9, C-terminal domain IQE94_04050 PF13442 Cytochrome C oxidase, cbb3-type, subunit III IQE94_04055 PF01225 Mur ligase family, catalytic domain IQE94_04055 PF02875 Mur ligase family, glutamate ligase domain IQE94_04055 PF08245 Mur ligase middle domain IQE94_04065 PF00487 Fatty acid desaturase IQE94_04070 PF00342 Phosphoglucose isomerase IQE94_04075 PF00132 Bacterial transferase hexapeptide (six repeats) IQE94_04080 PF00484 Carbonic anhydrase IQE94_04085 PF02224 Cytidylate kinase IQE94_04085 PF02569 Pantoate-beta-alanine ligase IQE94_04125 PF04055 Radical SAM superfamily IQE94_04130 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IQE94_04135 PF01546 Peptidase family M20/M25/M40 IQE94_04135 PF07687 Peptidase dimerisation domain IQE94_04150 PF18579 Rubisco accumulation factor 1 helix turn helix domain IQE94_04150 PF18578 Rubisco accumulation factor 1 alpha helical domain IQE94_04150 PF18087 Rubisco Assembly chaperone C-terminal domain IQE94_04155 PF00092 von Willebrand factor type A domain IQE94_04180 PF00027 Cyclic nucleotide-binding domain IQE94_04180 PF00325 Bacterial regulatory proteins, crp family IQE94_04185 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit IQE94_04190 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit IQE94_04195 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 IQE94_04200 PF00291 Pyridoxal-phosphate dependent enzyme IQE94_04205 PF01171 PP-loop family IQE94_04205 PF09179 TilS substrate binding domain IQE94_04235 PF11104 Type IV pilus assembly protein PilM; IQE94_04245 PF04966 Carbohydrate-selective porin, OprB family IQE94_04250 PF03808 Glycosyl transferase WecB/TagA/CpsF family IQE94_04265 PF01098 Cell cycle protein IQE94_04275 PF02543 Carbamoyltransferase N-terminus IQE94_04275 PF16861 Carbamoyltransferase C-terminus IQE94_04280 PF00623 RNA polymerase Rpb1, domain 2 IQE94_04280 PF04983 RNA polymerase Rpb1, domain 3 IQE94_04280 PF04997 RNA polymerase Rpb1, domain 1 IQE94_04285 PF00664 ABC transporter transmembrane region IQE94_04285 PF00005 ABC transporter IQE94_04285 PF03412 Peptidase C39 family IQE94_04290 PF13533 Biotin-lipoyl like IQE94_04295 PF00355 Rieske [2Fe-2S] domain IQE94_04305 PF01050 Mannose-6-phosphate isomerase IQE94_04305 PF00483 Nucleotidyl transferase IQE94_04310 PF01938 TRAM domain IQE94_04310 PF05958 tRNA (Uracil-5-)-methyltransferase IQE94_04335 PF13439 Glycosyltransferase Family 4 IQE94_04335 PF00534 Glycosyl transferases group 1 IQE94_04350 PF01220 Dehydroquinase class II IQE94_04360 PF14332 Domain of unknown function (DUF4388) IQE94_04360 PF00072 Response regulator receiver domain IQE94_04365 PF00072 Response regulator receiver domain IQE94_04365 PF00486 Transcriptional regulatory protein, C terminal IQE94_04370 PF00563 EAL domain IQE94_04370 PF01590 GAF domain IQE94_04370 PF00990 Diguanylate cyclase, GGDEF domain IQE94_04370 PF00360 Phytochrome region IQE94_04375 PF02514 CobN/Magnesium Chelatase IQE94_04390 PF00596 Class II Aldolase and Adducin N-terminal domain IQE94_04425 PF13180 PDZ domain IQE94_04435 PF00528 Binding-protein-dependent transport system inner membrane component IQE94_04445 PF02653 Branched-chain amino acid transport system / permease component IQE94_04450 PF01119 DNA mismatch repair protein, C-terminal domain IQE94_04450 PF08676 MutL C terminal dimerisation domain IQE94_04455 PF10417 C-terminal domain of 1-Cys peroxiredoxin IQE94_04455 PF00578 AhpC/TSA family IQE94_04470 PF01906 Putative heavy-metal-binding IQE94_04475 PF02481 DNA recombination-mediator protein A IQE94_04475 PF17782 DprA winged helix domain IQE94_04495 PF01636 Phosphotransferase enzyme family IQE94_04505 PF06470 SMC proteins Flexible Hinge Domain IQE94_04505 PF02463 RecF/RecN/SMC N terminal domain IQE94_04510 PF00490 Delta-aminolevulinic acid dehydratase IQE94_04515 PF01297 Zinc-uptake complex component A periplasmic IQE94_04520 PF00005 ABC transporter IQE94_04525 PF00950 ABC 3 transport family IQE94_04530 PF02492 CobW/HypB/UreG, nucleotide-binding domain IQE94_04530 PF07683 Cobalamin synthesis protein cobW C-terminal domain IQE94_04535 PF01227 GTP cyclohydrolase I IQE94_04555 PF13361 UvrD-like helicase C-terminal domain IQE94_04555 PF00580 UvrD/REP helicase N-terminal domain IQE94_04565 PF16736 Single Cache-like IQE94_04565 PF00989 PAS fold IQE94_04565 PF00512 His Kinase A (phospho-acceptor) domain IQE94_04565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IQE94_04570 PF01649 Ribosomal protein S20 IQE94_04575 PF01026 TatD related DNase IQE94_04580 PF04560 RNA polymerase Rpb2, domain 7 IQE94_04580 PF10385 RNA polymerase beta subunit external 1 domain IQE94_04580 PF04565 RNA polymerase Rpb2, domain 3 IQE94_04580 PF04561 RNA polymerase Rpb2, domain 2 IQE94_04580 PF04563 RNA polymerase beta subunit IQE94_04580 PF00562 RNA polymerase Rpb2, domain 6 IQE94_04585 PF05000 RNA polymerase Rpb1, domain 4 IQE94_04585 PF04998 RNA polymerase Rpb1, domain 5 IQE94_04585 PF04983 RNA polymerase Rpb1, domain 3 IQE94_04625 PF00294 pfkB family carbohydrate kinase IQE94_04640 PF01208 Uroporphyrinogen decarboxylase (URO-D) IQE94_04645 PF00082 Subtilase family IQE94_04650 PF01464 Transglycosylase SLT domain IQE94_04650 PF14718 Soluble lytic murein transglycosylase L domain IQE94_04655 PF00672 HAMP domain IQE94_04655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IQE94_04655 PF00512 His Kinase A (phospho-acceptor) domain IQE94_04665 PF00528 Binding-protein-dependent transport system inner membrane component IQE94_04670 PF00528 Binding-protein-dependent transport system inner membrane component IQE94_04675 PF01547 Bacterial extracellular solute-binding protein IQE94_04680 PF12706 Beta-lactamase superfamily domain IQE94_04680 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain IQE94_04685 PF02875 Mur ligase family, glutamate ligase domain IQE94_04685 PF08245 Mur ligase middle domain IQE94_04685 PF01225 Mur ligase family, catalytic domain IQE94_04695 PF02548 Ketopantoate hydroxymethyltransferase IQE94_04700 PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus IQE94_04705 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) IQE94_04715 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus IQE94_04715 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus IQE94_04715 PF00361 Proton-conducting membrane transporter IQE94_04720 PF00361 Proton-conducting membrane transporter IQE94_04725 PF02502 Ribose/Galactose Isomerase IQE94_04735 PF02844 Phosphoribosylglycinamide synthetase, N domain IQE94_04735 PF02843 Phosphoribosylglycinamide synthetase, C domain IQE94_04735 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain IQE94_04745 PF00164 Ribosomal protein S12/S23 IQE94_04750 PF00177 Ribosomal protein S7p/S5e IQE94_04755 PF03764 Elongation factor G, domain IV IQE94_04755 PF00009 Elongation factor Tu GTP binding domain IQE94_04755 PF14492 Elongation Factor G, domain II IQE94_04755 PF03144 Elongation factor Tu domain 2 IQE94_04755 PF00679 Elongation factor G C-terminus IQE94_04760 PF00009 Elongation factor Tu GTP binding domain IQE94_04760 PF03144 Elongation factor Tu domain 2 IQE94_04760 PF03143 Elongation factor Tu C-terminal domain IQE94_04765 PF00338 Ribosomal protein S10p/S20e IQE94_04785 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IQE94_04790 PF00497 Bacterial extracellular solute-binding proteins, family 3 IQE94_04800 PF00805 Pentapeptide repeats (8 copies) IQE94_04805 PF17676 LD-carboxypeptidase C-terminal domain IQE94_04805 PF02016 LD-carboxypeptidase N-terminal domain IQE94_04815 PF02492 CobW/HypB/UreG, nucleotide-binding domain IQE94_04830 PF02637 GatB domain IQE94_04830 PF02934 GatB/GatE catalytic domain IQE94_04850 PF01264 Chorismate synthase IQE94_04855 PF00542 Ribosomal protein L7/L12 C-terminal domain IQE94_04855 PF16320 Ribosomal protein L7/L12 dimerisation domain IQE94_04860 PF00466 Ribosomal protein L10 IQE94_04865 PF00687 Ribosomal protein L1p/L10e family IQE94_04870 PF00298 Ribosomal protein L11, RNA binding domain IQE94_04870 PF03946 Ribosomal protein L11, N-terminal domain IQE94_04875 PF02357 Transcription termination factor nusG IQE94_04875 PF00467 KOW motif IQE94_04880 PF00584 SecE/Sec61-gamma subunits of protein translocation complex IQE94_04890 PF01245 Ribosomal protein L19 IQE94_04915 PF16166 Chloroplast import apparatus Tic20-like IQE94_04920 PF00111 2Fe-2S iron-sulfur cluster binding domain IQE94_04925 PF09712 Poly(R)-hydroxyalkanoic acid synthase subunit (PHA_synth_III_E) IQE94_04930 PF00561 alpha/beta hydrolase fold IQE94_04940 PF02469 Fasciclin domain IQE94_04950 PF00361 Proton-conducting membrane transporter IQE94_04955 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus IQE94_04955 PF00361 Proton-conducting membrane transporter IQE94_04955 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus IQE94_04965 PF00223 Photosystem I psaA/psaB protein IQE94_04970 PF00223 Photosystem I psaA/psaB protein IQE94_04985 PF00990 Diguanylate cyclase, GGDEF domain IQE94_04985 PF00563 EAL domain IQE94_04985 PF03707 Bacterial signalling protein N terminal repeat IQE94_04990 PF00072 Response regulator receiver domain IQE94_04990 PF00486 Transcriptional regulatory protein, C terminal IQE94_04995 PF02779 Transketolase, pyrimidine binding domain IQE94_04995 PF02780 Transketolase, C-terminal domain IQE94_04995 PF00364 Biotin-requiring enzyme IQE94_05000 PF00936 BMC domain IQE94_05005 PF00936 BMC domain IQE94_05010 PF02595 Glycerate kinase family IQE94_05015 PF00395 S-layer homology domain IQE94_05015 PF04966 Carbohydrate-selective porin, OprB family IQE94_05025 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain IQE94_05025 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain IQE94_05045 PF08264 Anticodon-binding domain of tRNA IQE94_05045 PF00133 tRNA synthetases class I (I, L, M and V) IQE94_05045 PF13603 Leucyl-tRNA synthetase, Domain 2 IQE94_05045 PF09334 tRNA synthetases class I (M) IQE94_05050 PF03616 Sodium/glutamate symporter IQE94_05060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IQE94_05060 PF00512 His Kinase A (phospho-acceptor) domain IQE94_05080 PF02540 NAD synthase IQE94_05090 PF07977 FabA-like domain IQE94_05095 PF04029 2-phosphosulpholactate phosphatase IQE94_05100 PF00881 Nitroreductase family IQE94_05105 PF02938 GAD domain IQE94_05105 PF00152 tRNA synthetases class II (D, K and N) IQE94_05105 PF01336 OB-fold nucleic acid binding domain IQE94_05115 PF00478 IMP dehydrogenase / GMP reductase domain IQE94_05120 PF00528 Binding-protein-dependent transport system inner membrane component IQE94_05145 PF02875 Mur ligase family, glutamate ligase domain IQE94_05145 PF08245 Mur ligase middle domain IQE94_05145 PF08443 RimK-like ATP-grasp domain IQE94_05150 PF03575 Peptidase family S51 IQE94_05165 PF01627 Hpt domain IQE94_05165 PF00672 HAMP domain IQE94_05165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IQE94_05165 PF00512 His Kinase A (phospho-acceptor) domain IQE94_05165 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) IQE94_05165 PF00072 Response regulator receiver domain IQE94_05170 PF03209 PUCC protein IQE94_05180 PF02803 Thiolase, C-terminal domain IQE94_05180 PF00108 Thiolase, N-terminal domain IQE94_05185 PF00255 Glutathione peroxidase IQE94_05190 PF00211 Adenylate and Guanylate cyclase catalytic domain IQE94_05200 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IQE94_05200 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IQE94_05200 PF01842 ACT domain IQE94_05210 PF01383 CpcD/allophycocyanin linker domain IQE94_05215 PF00502 Phycobilisome protein IQE94_05220 PF00502 Phycobilisome protein IQE94_05245 PF00534 Glycosyl transferases group 1 IQE94_05245 PF13439 Glycosyltransferase Family 4 IQE94_05250 PF12848 ABC transporter IQE94_05250 PF16326 ABC transporter C-terminal domain IQE94_05250 PF00005 ABC transporter IQE94_05260 PF01479 S4 domain IQE94_05260 PF01728 FtsJ-like methyltransferase IQE94_05280 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase IQE94_05285 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain IQE94_05290 PF05116 Sucrose-6F-phosphate phosphohydrolase IQE94_05295 PF01740 STAS domain IQE94_05300 PF00636 Ribonuclease III domain IQE94_05305 PF00588 SpoU rRNA Methylase family IQE94_05305 PF08032 RNA 2'-O ribose methyltransferase substrate binding IQE94_05315 PF09190 DALR domain IQE94_05315 PF01406 tRNA synthetases class I (C) catalytic domain IQE94_05320 PF02545 Maf-like protein IQE94_05335 PF03055 Retinal pigment epithelial membrane protein IQE94_05345 PF10716 NADH dehydrogenase transmembrane subunit IQE94_05360 PF00291 Pyridoxal-phosphate dependent enzyme IQE94_05360 PF00585 C-terminal regulatory domain of Threonine dehydratase IQE94_05365 PF04472 Cell division protein SepF IQE94_05370 PF01050 Mannose-6-phosphate isomerase IQE94_05370 PF00483 Nucleotidyl transferase IQE94_05380 PF00166 Chaperonin 10 Kd subunit IQE94_05385 PF00118 TCP-1/cpn60 chaperonin family IQE94_05390 PF00293 NUDIX domain IQE94_05395 PF00682 HMGL-like IQE94_05395 PF08502 LeuA allosteric (dimerisation) domain IQE94_05405 PF00190 Cupin IQE94_05410 PF00343 Carbohydrate phosphorylase IQE94_05415 PF03116 NQR2, RnfD, RnfE family IQE94_05420 PF00069 Protein kinase domain IQE94_05535 PF14528 LAGLIDADG-like domain IQE94_05535 PF03796 DnaB-like helicase C terminal domain IQE94_05535 PF00772 DnaB-like helicase N terminal domain IQE94_05600 PF01368 DHH family IQE94_05600 PF02272 DHHA1 domain IQE94_05600 PF17768 RecJ OB domain IQE94_05600 PF10141 Single-strand DNA-specific exonuclease, C terminal domain IQE94_05605 PF00672 HAMP domain IQE94_05605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IQE94_05605 PF00512 His Kinase A (phospho-acceptor) domain IQE94_05605 PF01627 Hpt domain IQE94_05605 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) IQE94_05605 PF00072 Response regulator receiver domain IQE94_05615 PF00294 pfkB family carbohydrate kinase IQE94_05635 PF13419 Haloacid dehalogenase-like hydrolase IQE94_05640 PF08331 Domain of unknown function (DUF1730) IQE94_05645 PF00885 6,7-dimethyl-8-ribityllumazine synthase IQE94_05650 PF01737 YCF9 IQE94_05660 PF01435 Peptidase family M48 IQE94_05665 PF00575 S1 RNA binding domain IQE94_05670 PF02463 RecF/RecN/SMC N terminal domain IQE94_05675 PF00005 ABC transporter IQE94_05675 PF00664 ABC transporter transmembrane region IQE94_05680 PF02887 Pyruvate kinase, alpha/beta domain IQE94_05680 PF00391 PEP-utilising enzyme, mobile domain IQE94_05680 PF00224 Pyruvate kinase, barrel domain IQE94_05695 PF03976 Polyphosphate kinase 2 (PPK2) IQE94_05700 PF04055 Radical SAM superfamily IQE94_05700 PF06968 Biotin and Thiamin Synthesis associated domain IQE94_05705 PF02632 BioY family IQE94_05710 PF01252 Signal peptidase (SPase) II IQE94_05715 PF13546 DDE superfamily endonuclease IQE94_05730 PF00266 Aminotransferase class-V IQE94_05740 PF08676 MutL C terminal dimerisation domain IQE94_05740 PF01119 DNA mismatch repair protein, C-terminal domain IQE94_05745 PF04851 Type III restriction enzyme, res subunit IQE94_05745 PF00271 Helicase conserved C-terminal domain IQE94_05755 PF00117 Glutamine amidotransferase class-I IQE94_05755 PF02540 NAD synthase IQE94_05755 PF00958 GMP synthase C terminal domain IQE94_05775 PF07685 CobB/CobQ-like glutamine amidotransferase domain IQE94_05775 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain IQE94_05780 PF00999 Sodium/hydrogen exchanger family IQE94_05785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IQE94_05785 PF03466 LysR substrate binding domain IQE94_05790 PF13546 DDE superfamily endonuclease IQE94_05820 PF00830 Ribosomal L28 family IQE94_05830 PF01126 Heme oxygenase IQE94_05835 PF01218 Coproporphyrinogen III oxidase IQE94_05845 PF01790 Prolipoprotein diacylglyceryl transferase IQE94_05870 PF03707 Bacterial signalling protein N terminal repeat IQE94_05870 PF00990 Diguanylate cyclase, GGDEF domain IQE94_05870 PF00563 EAL domain IQE94_05875 PF01565 FAD binding domain IQE94_05905 PF02537 CrcB-like protein, Camphor Resistance (CrcB) IQE94_05910 PF01494 FAD binding domain IQE94_05920 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain IQE94_05920 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IQE94_05920 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain IQE94_05935 PF06514 Photosystem II 12 kDa extrinsic protein (PsbU) IQE94_05940 PF12805 FUSC-like inner membrane protein yccS IQE94_05945 PF00365 Phosphofructokinase IQE94_05955 PF01746 tRNA (Guanine-1)-methyltransferase IQE94_05960 PF13416 Bacterial extracellular solute-binding protein IQE94_05970 PF01593 Flavin containing amine oxidoreductase IQE94_05980 PF00361 Proton-conducting membrane transporter IQE94_06000 PF03781 Sulfatase-modifying factor enzyme 1 IQE94_06005 PF05685 Putative restriction endonuclease IQE94_06010 PF00180 Isocitrate/isopropylmalate dehydrogenase IQE94_06020 PF01209 ubiE/COQ5 methyltransferase family IQE94_06025 PF00582 Universal stress protein family IQE94_06030 PF08279 HTH domain IQE94_06030 PF02237 Biotin protein ligase C terminal domain IQE94_06030 PF03099 Biotin/lipoate A/B protein ligase family IQE94_06055 PF04055 Radical SAM superfamily IQE94_06065 PF13546 DDE superfamily endonuclease IQE94_06080 PF02397 Bacterial sugar transferase IQE94_06090 PF13439 Glycosyltransferase Family 4 IQE94_06090 PF00534 Glycosyl transferases group 1 IQE94_06120 PF00990 Diguanylate cyclase, GGDEF domain IQE94_06120 PF00072 Response regulator receiver domain IQE94_06130 PF00535 Glycosyl transferase family 2 IQE94_06165 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA IQE94_06175 PF02684 Lipid-A-disaccharide synthetase IQE94_06180 PF00829 Ribosomal prokaryotic L21 protein IQE94_06185 PF01016 Ribosomal L27 protein IQE94_06190 PF01427 D-ala-D-ala dipeptidase IQE94_06200 PF12169 DNA polymerase III subunits gamma and tau domain III IQE94_06210 PF00133 tRNA synthetases class I (I, L, M and V) IQE94_06210 PF08264 Anticodon-binding domain of tRNA IQE94_06230 PF01523 Putative modulator of DNA gyrase IQE94_06240 PF02233 NAD(P) transhydrogenase beta subunit IQE94_06260 PF01262 Alanine dehydrogenase/PNT, C-terminal domain IQE94_06260 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch IQE94_06260 PF05222 Alanine dehydrogenase/PNT, N-terminal domain IQE94_06270 PF00378 Enoyl-CoA hydratase/isomerase IQE94_06280 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain IQE94_06280 PF02951 Prokaryotic glutathione synthetase, N-terminal domain IQE94_06285 PF00462 Glutaredoxin IQE94_06295 PF08386 TAP-like protein IQE94_06295 PF00561 alpha/beta hydrolase fold IQE94_06310 PF07969 Amidohydrolase family IQE94_06335 PF12697 Alpha/beta hydrolase family IQE94_06340 PF01230 HIT domain IQE94_06350 PF00890 FAD binding domain IQE94_06350 PF02910 Fumarate reductase flavoprotein C-term IQE94_06365 PF01593 Flavin containing amine oxidoreductase IQE94_06370 PF00582 Universal stress protein family IQE94_06375 PF01740 STAS domain IQE94_06375 PF00916 Sulfate permease family IQE94_06380 PF00009 Elongation factor Tu GTP binding domain IQE94_06380 PF16658 Class II release factor RF3, C-terminal domain IQE94_06385 PF07244 Surface antigen variable number repeat IQE94_06385 PF01103 Surface antigen IQE94_06390 PF01259 SAICAR synthetase IQE94_06400 PF00069 Protein kinase domain IQE94_06410 PF01661 Macro domain IQE94_06440 PF04015 Domain of unknown function (DUF362) IQE94_06450 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IQE94_06460 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain IQE94_06460 PF01488 Shikimate / quinate 5-dehydrogenase IQE94_06460 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain IQE94_06465 PF12697 Alpha/beta hydrolase family IQE94_06470 PF10726 Protein of function (DUF2518) IQE94_06475 PF01343 Peptidase family S49 IQE94_06485 PF01590 GAF domain IQE94_06485 PF00360 Phytochrome region IQE94_06485 PF00563 EAL domain IQE94_06485 PF00990 Diguanylate cyclase, GGDEF domain IQE94_06490 PF00072 Response regulator receiver domain IQE94_06490 PF00196 Bacterial regulatory proteins, luxR family IQE94_06500 PF00106 short chain dehydrogenase IQE94_06505 PF02086 D12 class N6 adenine-specific DNA methyltransferase IQE94_06520 PF00266 Aminotransferase class-V IQE94_06545 PF03683 Uncharacterised protein family (UPF0175) IQE94_06565 PF06480 FtsH Extracellular IQE94_06565 PF01434 Peptidase family M41 IQE94_06565 PF17862 AAA+ lid domain IQE94_06565 PF00004 ATPase family associated with various cellular activities (AAA) IQE94_06580 PF00012 Hsp70 protein IQE94_06590 PF02219 Methylenetetrahydrofolate reductase IQE94_06590 PF02574 Homocysteine S-methyltransferase IQE94_06595 PF06298 Photosystem II protein Y (PsbY) IQE94_06610 PF01751 Toprim domain IQE94_06610 PF00986 DNA gyrase B subunit, carboxyl terminus IQE94_06610 PF00204 DNA gyrase B IQE94_06610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IQE94_06625 PF04551 GcpE protein IQE94_06635 PF00675 Insulinase (Peptidase family M16) IQE94_06635 PF05193 Peptidase M16 inactive domain IQE94_06640 PF00675 Insulinase (Peptidase family M16) IQE94_06640 PF05193 Peptidase M16 inactive domain IQE94_06645 PF02875 Mur ligase family, glutamate ligase domain IQE94_06645 PF08245 Mur ligase middle domain IQE94_06650 PF04055 Radical SAM superfamily IQE94_06655 PF04542 Sigma-70 region 2 IQE94_06655 PF04539 Sigma-70 region 3 IQE94_06655 PF00140 Sigma-70 factor, region 1.2 IQE94_06655 PF04545 Sigma-70, region 4 IQE94_06665 PF03749 Sugar fermentation stimulation protein RE domain IQE94_06665 PF17746 SfsA N-terminal OB domain IQE94_06675 PF07085 DRTGG domain IQE94_06675 PF01515 Phosphate acetyl/butaryl transferase IQE94_06680 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain IQE94_06680 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain IQE94_06685 PF03900 Porphobilinogen deaminase, C-terminal domain IQE94_06685 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain IQE94_06710 PF00579 tRNA synthetases class I (W and Y) IQE94_06730 PF06574 FAD synthetase IQE94_06730 PF01687 Riboflavin kinase IQE94_06735 PF00005 ABC transporter IQE94_06740 PF00037 4Fe-4S binding domain IQE94_06745 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IQE94_06745 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IQE94_06745 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IQE94_06745 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IQE94_06755 PF08544 GHMP kinases C terminal IQE94_06755 PF00288 GHMP kinases N terminal domain IQE94_06765 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IQE94_06770 PF00497 Bacterial extracellular solute-binding proteins, family 3 IQE94_06790 PF04055 Radical SAM superfamily IQE94_06795 PF03130 PBS lyase HEAT-like repeat IQE94_06800 PF01557 Fumarylacetoacetate (FAA) hydrolase family IQE94_06805 PF01250 Ribosomal protein S6 IQE94_06815 PF02617 ATP-dependent Clp protease adaptor protein ClpS IQE94_06820 PF06055 Exopolysaccharide synthesis, ExoD IQE94_06825 PF07478 D-ala D-ala ligase C-terminus IQE94_06825 PF01820 D-ala D-ala ligase N-terminus IQE94_06830 PF00528 Binding-protein-dependent transport system inner membrane component IQE94_06860 PF03109 ABC1 family IQE94_06870 PF01713 Smr domain IQE94_06870 PF00488 MutS domain V IQE94_06875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IQE94_06875 PF03466 LysR substrate binding domain IQE94_06880 PF02678 Pirin IQE94_06880 PF17954 Quercetinase C-terminal cupin domain IQE94_06895 PF13086 AAA domain IQE94_06895 PF13087 AAA domain IQE94_06895 PF13195 Protein of unknown function (DUF4011) IQE94_06895 PF13086 AAA domain IQE94_06895 PF13195 Protein of unknown function (DUF4011) IQE94_06895 PF13087 AAA domain IQE94_06915 PF01791 DeoC/LacD family aldolase IQE94_06920 PF02885 Glycosyl transferase family, helical bundle domain IQE94_06920 PF00591 Glycosyl transferase family, a/b domain IQE94_06955 PF07228 Stage II sporulation protein E (SpoIIE) IQE94_06955 PF00672 HAMP domain IQE94_06960 PF01740 STAS domain IQE94_06965 PF00128 Alpha amylase, catalytic domain IQE94_06965 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) IQE94_06970 PF01740 STAS domain IQE94_06995 PF03992 Antibiotic biosynthesis monooxygenase IQE94_07010 PF01261 Xylose isomerase-like TIM barrel IQE94_07015 PF00561 alpha/beta hydrolase fold IQE94_07030 PF00400 WD domain, G-beta repeat IQE94_07035 PF00400 WD domain, G-beta repeat IQE94_07055 PF03480 Bacterial extracellular solute-binding protein, family 7 IQE94_07070 PF02468 Photosystem II reaction centre N protein (psbN) IQE94_07075 PF00737 Photosystem II 10 kDa phosphoprotein IQE94_07080 PF00355 Rieske [2Fe-2S] domain IQE94_07085 PF01333 Apocytochrome F, C-terminal IQE94_07085 PF16639 Apocytochrome F, N-terminal IQE94_07095 PF13580 SIS domain IQE94_07115 PF01520 N-acetylmuramoyl-L-alanine amidase IQE94_07115 PF11741 AMIN domain IQE94_07120 PF01541 GIY-YIG catalytic domain IQE94_07120 PF12826 Helix-hairpin-helix motif IQE94_07120 PF02151 UvrB/uvrC motif IQE94_07120 PF08459 UvrC Helix-hairpin-helix N-terminal IQE94_07130 PF03109 ABC1 family IQE94_07150 PF00176 SNF2 family N-terminal domain IQE94_07150 PF00271 Helicase conserved C-terminal domain IQE94_07225 PF04055 Radical SAM superfamily IQE94_07230 PF03588 Leucyl/phenylalanyl-tRNA protein transferase IQE94_07240 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IQE94_07240 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IQE94_07275 PF00762 Ferrochelatase IQE94_07280 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain IQE94_07285 PF00145 C-5 cytosine-specific DNA methylase IQE94_07285 PF12728 Helix-turn-helix domain IQE94_07290 PF09570 SinI restriction endonuclease IQE94_07295 PF05670 NFACT protein RNA binding domain IQE94_07300 PF01597 Glycine cleavage H-protein IQE94_07305 PF01476 LysM domain IQE94_07305 PF08525 Opacity-associated protein A N-terminal motif IQE94_07305 PF01551 Peptidase family M23 IQE94_07310 PF01425 Amidase IQE94_07315 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) IQE94_07320 PF00890 FAD binding domain IQE94_07320 PF02910 Fumarate reductase flavoprotein C-term IQE94_07330 PF07499 RuvA, C-terminal domain IQE94_07330 PF01330 RuvA N terminal domain IQE94_07335 PF01741 Large-conductance mechanosensitive channel, MscL IQE94_07360 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IQE94_07365 PF00343 Carbohydrate phosphorylase IQE94_07375 PF00528 Binding-protein-dependent transport system inner membrane component IQE94_07380 PF04966 Carbohydrate-selective porin, OprB family IQE94_07385 PF00990 Diguanylate cyclase, GGDEF domain IQE94_07385 PF03707 Bacterial signalling protein N terminal repeat IQE94_07385 PF00563 EAL domain IQE94_07405 PF00464 Serine hydroxymethyltransferase IQE94_07410 PF00012 Hsp70 protein IQE94_07415 PF00226 DnaJ domain IQE94_07415 PF01556 DnaJ C terminal domain IQE94_07420 PF12697 Alpha/beta hydrolase family IQE94_07435 PF00427 Phycobilisome Linker polypeptide IQE94_07440 PF09367 CpeS-like protein IQE94_07450 PF02562 PhoH-like protein IQE94_07465 PF00950 ABC 3 transport family IQE94_07470 PF00005 ABC transporter IQE94_07505 PF06167 Glucose-regulated metallo-peptidase M90 IQE94_07510 PF00072 Response regulator receiver domain IQE94_07515 PF00521 DNA gyrase/topoisomerase IV, subunit A IQE94_07515 PF03989 DNA gyrase C-terminal domain, beta-propeller IQE94_07550 PF00400 WD domain, G-beta repeat IQE94_07555 PF02602 Uroporphyrinogen-III synthase HemD IQE94_07570 PF00226 DnaJ domain IQE94_07570 PF01556 DnaJ C terminal domain IQE94_07570 PF00684 DnaJ central domain IQE94_07575 PF00012 Hsp70 protein IQE94_07580 PF08669 Glycine cleavage T-protein C-terminal barrel domain IQE94_07580 PF01571 Aminomethyltransferase folate-binding domain IQE94_07595 PF02583 Metal-sensitive transcriptional repressor IQE94_07605 PF00571 CBS domain IQE94_07605 PF00478 IMP dehydrogenase / GMP reductase domain IQE94_07650 PF02514 CobN/Magnesium Chelatase IQE94_07655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IQE94_07655 PF00512 His Kinase A (phospho-acceptor) domain IQE94_07655 PF00989 PAS fold IQE94_07670 PF01435 Peptidase family M48 IQE94_07675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IQE94_07675 PF00512 His Kinase A (phospho-acceptor) domain IQE94_07675 PF01627 Hpt domain IQE94_07675 PF00072 Response regulator receiver domain IQE94_07675 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) IQE94_07675 PF00672 HAMP domain IQE94_07700 PF01926 50S ribosome-binding GTPase IQE94_07700 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal IQE94_07710 PF01960 ArgJ family IQE94_07725 PF01894 Uncharacterised protein family UPF0047 IQE94_07730 PF12452 Protein of unknown function (DUF3685) IQE94_07730 PF00072 Response regulator receiver domain IQE94_07735 PF08402 TOBE domain IQE94_07735 PF00005 ABC transporter IQE94_07745 PF02361 Cobalt transport protein IQE94_07750 PF00425 chorismate binding enzyme IQE94_07750 PF04715 Anthranilate synthase component I, N terminal region IQE94_07760 PF04055 Radical SAM superfamily IQE94_07760 PF06969 HemN C-terminal domain IQE94_07765 PF01126 Heme oxygenase IQE94_07770 PF02915 Rubrerythrin IQE94_07780 PF03816 Cell envelope-related transcriptional attenuator domain IQE94_07785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IQE94_07785 PF00512 His Kinase A (phospho-acceptor) domain IQE94_07785 PF01627 Hpt domain IQE94_07785 PF00072 Response regulator receiver domain IQE94_07785 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) IQE94_07785 PF00672 HAMP domain IQE94_07790 PF00990 Diguanylate cyclase, GGDEF domain IQE94_07790 PF00072 Response regulator receiver domain IQE94_07795 PF07228 Stage II sporulation protein E (SpoIIE) IQE94_07795 PF00672 HAMP domain IQE94_07800 PF00005 ABC transporter IQE94_07800 PF09383 NIL domain IQE94_07805 PF00355 Rieske [2Fe-2S] domain IQE94_07810 PF00575 S1 RNA binding domain IQE94_07815 PF01807 CHC2 zinc finger IQE94_07815 PF08275 DNA primase catalytic core, N-terminal domain IQE94_07820 PF00124 Photosynthetic reaction centre protein IQE94_07825 PF03481 Putative GTP-binding controlling metal-binding IQE94_07825 PF01300 Telomere recombination IQE94_07845 PF00582 Universal stress protein family IQE94_07855 PF02529 Cytochrome B6-F complex subunit 5 IQE94_07860 PF00149 Calcineurin-like phosphoesterase IQE94_07870 PF02570 Precorrin-8X methylmutase IQE94_07880 PF00468 Ribosomal protein L34 IQE94_07885 PF00825 Ribonuclease P IQE94_07895 PF02096 60Kd inner membrane protein IQE94_07905 PF00226 DnaJ domain IQE94_07905 PF01556 DnaJ C terminal domain IQE94_07905 PF00684 DnaJ central domain IQE94_07910 PF00459 Inositol monophosphatase family IQE94_07915 PF00111 2Fe-2S iron-sulfur cluster binding domain IQE94_07930 PF00877 NlpC/P60 family IQE94_07950 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IQE94_07950 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IQE94_07985 PF13546 DDE superfamily endonuclease IQE94_08000 PF00106 short chain dehydrogenase IQE94_08020 PF02684 Lipid-A-disaccharide synthetase IQE94_08025 PF00111 2Fe-2S iron-sulfur cluster binding domain IQE94_08030 PF02617 ATP-dependent Clp protease adaptor protein ClpS IQE94_08035 PF00535 Glycosyl transferase family 2 IQE94_08040 PF00719 Inorganic pyrophosphatase IQE94_08045 PF10664 Cyanobacterial and plastid NDH-1 subunit M IQE94_08055 PF01915 Glycosyl hydrolase family 3 C-terminal domain IQE94_08055 PF00933 Glycosyl hydrolase family 3 N terminal domain IQE94_08065 PF02152 Dihydroneopterin aldolase IQE94_08070 PF01810 LysE type translocator IQE94_08075 PF00581 Rhodanese-like domain IQE94_08075 PF00899 ThiF family IQE94_08085 PF01479 S4 domain IQE94_08085 PF00849 RNA pseudouridylate synthase IQE94_08090 PF02397 Bacterial sugar transferase IQE94_08095 PF00534 Glycosyl transferases group 1 IQE94_08095 PF13439 Glycosyltransferase Family 4 IQE94_08100 PF00437 Type II/IV secretion system protein IQE94_08115 PF01192 RNA polymerase Rpb6 IQE94_08135 PF01668 SmpB protein IQE94_08160 PF10119 Predicted methyltransferase regulatory domain IQE94_08160 PF13847 Methyltransferase domain IQE94_08165 PF00004 ATPase family associated with various cellular activities (AAA) IQE94_08165 PF07724 AAA domain (Cdc48 subfamily) IQE94_08165 PF17871 AAA lid domain IQE94_08165 PF02861 Clp amino terminal domain, pathogenicity island component IQE94_08165 PF10431 C-terminal, D2-small domain, of ClpB protein IQE94_08175 PF00485 Phosphoribulokinase / Uridine kinase family IQE94_08180 PF13651 Adenine-specific methyltransferase EcoRI IQE94_08185 PF02963 Restriction endonuclease EcoRI IQE94_08190 PF01383 CpcD/allophycocyanin linker domain IQE94_08190 PF00970 Oxidoreductase FAD-binding domain IQE94_08190 PF00175 Oxidoreductase NAD-binding domain IQE94_08205 PF13326 Photosystem II Pbs27 IQE94_08210 PF00035 Double-stranded RNA binding motif IQE94_08210 PF14622 Ribonuclease-III-like IQE94_08215 PF03649 Uncharacterised protein family (UPF0014) IQE94_08220 PF00924 Mechanosensitive ion channel IQE94_08220 PF05552 Conserved TM helix IQE94_08225 PF03055 Retinal pigment epithelial membrane protein IQE94_08230 PF06206 CpeT/CpcT family (DUF1001) IQE94_08235 PF01066 CDP-alcohol phosphatidyltransferase IQE94_08240 PF01613 Flavin reductase like domain IQE94_08240 PF00258 Flavodoxin IQE94_08250 PF00162 Phosphoglycerate kinase IQE94_08255 PF03466 LysR substrate binding domain IQE94_08255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IQE94_08260 PF01411 tRNA synthetases class II (A) IQE94_08260 PF02272 DHHA1 domain IQE94_08260 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IQE94_08295 PF05368 NmrA-like family IQE94_08300 PF01513 ATP-NAD kinase IQE94_08315 PF01725 Ham1 family IQE94_08320 PF00543 Nitrogen regulatory protein P-II IQE94_08335 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase IQE94_08340 PF00892 EamA-like transporter family IQE94_08350 PF03330 Lytic transglycolase IQE94_08360 PF12323 Helix-turn-helix domain IQE94_08360 PF01385 Probable transposase IQE94_08360 PF07282 Putative transposase DNA-binding domain IQE94_08365 PF00270 DEAD/DEAH box helicase IQE94_08365 PF03461 TRCF domain IQE94_08365 PF00271 Helicase conserved C-terminal domain IQE94_08365 PF17757 UvrB interaction domain IQE94_08365 PF02559 CarD-like/TRCF domain IQE94_08370 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IQE94_08380 PF00132 Bacterial transferase hexapeptide (six repeats) IQE94_08380 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 IQE94_08415 PF01891 Cobalt uptake substrate-specific transmembrane region IQE94_08425 PF00005 ABC transporter IQE94_08435 PF00521 DNA gyrase/topoisomerase IV, subunit A IQE94_08435 PF03989 DNA gyrase C-terminal domain, beta-propeller IQE94_08445 PF00999 Sodium/hydrogen exchanger family IQE94_08445 PF00582 Universal stress protein family IQE94_08455 PF00300 Histidine phosphatase superfamily (branch 1) IQE94_08460 PF00072 Response regulator receiver domain IQE94_08460 PF00486 Transcriptional regulatory protein, C terminal IQE94_08470 PF13286 Phosphohydrolase-associated domain IQE94_08470 PF01966 HD domain IQE94_08480 PF08264 Anticodon-binding domain of tRNA IQE94_08480 PF00133 tRNA synthetases class I (I, L, M and V) IQE94_08480 PF09334 tRNA synthetases class I (M) IQE94_08485 PF00795 Carbon-nitrogen hydrolase IQE94_08510 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IQE94_08510 PF16582 Middle domain of thiamine pyrophosphate IQE94_08510 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IQE94_08515 PF01207 Dihydrouridine synthase (Dus) IQE94_08530 PF03092 BT1 family IQE94_08540 PF10693 Protein of unknown function (DUF2499) IQE94_08550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IQE94_08550 PF00989 PAS fold IQE94_08550 PF16736 Single Cache-like IQE94_08550 PF00512 His Kinase A (phospho-acceptor) domain IQE94_08555 PF05552 Conserved TM helix IQE94_08555 PF00924 Mechanosensitive ion channel IQE94_08560 PF02091 Glycyl-tRNA synthetase alpha subunit IQE94_08575 PF02654 Cobalamin-5-phosphate synthase IQE94_08585 PF01571 Aminomethyltransferase folate-binding domain IQE94_08590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IQE94_08590 PF03466 LysR substrate binding domain IQE94_08620 PF00892 EamA-like transporter family IQE94_08625 PF00654 Voltage gated chloride channel IQE94_08635 PF09367 CpeS-like protein IQE94_08640 PF00421 Photosystem II protein IQE94_08645 PF00124 Photosynthetic reaction centre protein IQE94_08650 PF00308 Bacterial dnaA protein IQE94_08650 PF08299 Bacterial dnaA protein helix-turn-helix IQE94_08650 PF11638 DnaA N-terminal domain IQE94_08660 PF02222 ATP-grasp domain IQE94_08665 PF06803 Protein of unknown function (DUF1232) IQE94_08670 PF00288 GHMP kinases N terminal domain IQE94_08670 PF08544 GHMP kinases C terminal IQE94_08675 PF01523 Putative modulator of DNA gyrase IQE94_08690 PF16657 Maltogenic Amylase, C-terminal domain IQE94_08690 PF02903 Alpha amylase, N-terminal ig-like domain IQE94_08690 PF00128 Alpha amylase, catalytic domain IQE94_08695 PF16326 ABC transporter C-terminal domain IQE94_08695 PF12848 ABC transporter IQE94_08695 PF00005 ABC transporter IQE94_08700 PF10017 Histidine-specific methyltransferase, SAM-dependent IQE94_08710 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family IQE94_08735 PF13546 DDE superfamily endonuclease IQE94_08760 PF00005 ABC transporter IQE94_08760 PF00664 ABC transporter transmembrane region IQE94_08770 PF00730 HhH-GPD superfamily base excision DNA repair protein IQE94_08775 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IQE94_08775 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IQE94_08785 PF00902 Sec-independent protein translocase protein (TatC) IQE94_08790 PF02190 ATP-dependent protease La (LON) substrate-binding domain IQE94_08790 PF00004 ATPase family associated with various cellular activities (AAA) IQE94_08790 PF05362 Lon protease (S16) C-terminal proteolytic domain IQE94_08795 PF00004 ATPase family associated with various cellular activities (AAA) IQE94_08795 PF01434 Peptidase family M41 IQE94_08795 PF06480 FtsH Extracellular IQE94_08795 PF17862 AAA+ lid domain IQE94_08805 PF01134 Glucose inhibited division protein A IQE94_08810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IQE94_08810 PF13426 PAS domain IQE94_08810 PF00072 Response regulator receiver domain IQE94_08810 PF00512 His Kinase A (phospho-acceptor) domain IQE94_08810 PF08448 PAS fold IQE94_08815 PF13932 GidA associated domain IQE94_08815 PF01134 Glucose inhibited division protein A IQE94_08825 PF00127 Copper binding proteins, plastocyanin/azurin family IQE94_08835 PF12706 Beta-lactamase superfamily domain IQE94_08840 PF00211 Adenylate and Guanylate cyclase catalytic domain IQE94_08840 PF00072 Response regulator receiver domain IQE94_08850 PF07859 alpha/beta hydrolase fold IQE94_08860 PF00990 Diguanylate cyclase, GGDEF domain IQE94_08870 PF00491 Arginase family IQE94_08875 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA IQE94_08880 PF02492 CobW/HypB/UreG, nucleotide-binding domain IQE94_08890 PF00528 Binding-protein-dependent transport system inner membrane component IQE94_08895 PF00005 ABC transporter IQE94_08900 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family IQE94_08905 PF00085 Thioredoxin IQE94_08910 PF00510 Cytochrome c oxidase subunit III IQE94_08915 PF00115 Cytochrome C and Quinol oxidase polypeptide I IQE94_08920 PF02790 Cytochrome C oxidase subunit II, transmembrane domain IQE94_08920 PF00116 Cytochrome C oxidase subunit II, periplasmic domain IQE94_08940 PF01168 Alanine racemase, N-terminal domain IQE94_08945 PF02163 Peptidase family M50 IQE94_08945 PF00571 CBS domain IQE94_08955 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain IQE94_08955 PF00476 DNA polymerase family A IQE94_08955 PF01367 5'-3' exonuclease, C-terminal SAM fold IQE94_08955 PF01612 3'-5' exonuclease IQE94_08960 PF13546 DDE superfamily endonuclease IQE94_08980 PF00317 Ribonucleotide reductase, all-alpha domain IQE94_08980 PF02867 Ribonucleotide reductase, barrel domain IQE94_08980 PF03477 ATP cone domain IQE94_09000 PF01747 ATP-sulfurylase IQE94_09000 PF14306 PUA-like domain IQE94_09005 PF00534 Glycosyl transferases group 1 IQE94_09005 PF17101 Stealth protein CR1, conserved region 1 IQE94_09005 PF11380 Stealth protein CR2, conserved region 2 IQE94_09005 PF17103 Stealth protein CR4, conserved region 4 IQE94_09005 PF17102 Stealth protein CR3, conserved region 3 IQE94_09015 PF02872 5'-nucleotidase, C-terminal domain IQE94_09030 PF01934 Protein of unknown function DUF86 IQE94_09040 PF01934 Protein of unknown function DUF86 IQE94_09065 PF01850 PIN domain IQE94_09075 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system IQE94_09080 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system IQE94_09110 PF01493 GXGXG motif IQE94_09110 PF01645 Conserved region in glutamate synthase IQE94_09110 PF04898 Glutamate synthase central domain IQE94_09110 PF00310 Glutamine amidotransferases class-II IQE94_09120 PF00069 Protein kinase domain IQE94_09135 PF07995 Glucose / Sorbosone dehydrogenase IQE94_09140 PF07685 CobB/CobQ-like glutamine amidotransferase domain IQE94_09140 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain IQE94_09150 PF00501 AMP-binding enzyme IQE94_09155 PF14332 Domain of unknown function (DUF4388) IQE94_09155 PF00072 Response regulator receiver domain IQE94_09160 PF00072 Response regulator receiver domain IQE94_09160 PF00486 Transcriptional regulatory protein, C terminal IQE94_09170 PF01590 GAF domain IQE94_09170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IQE94_09175 PF02405 Permease MlaE IQE94_09180 PF02416 mttA/Hcf106 family IQE94_09185 PF00563 EAL domain IQE94_09185 PF01590 GAF domain IQE94_09185 PF00990 Diguanylate cyclase, GGDEF domain IQE94_09185 PF00360 Phytochrome region IQE94_09195 PF13476 AAA domain IQE94_09200 PF00226 DnaJ domain IQE94_09200 PF01556 DnaJ C terminal domain IQE94_09200 PF00684 DnaJ central domain IQE94_09205 PF01783 Ribosomal L32p protein family IQE94_09215 PF05154 TM2 domain IQE94_09225 PF00248 Aldo/keto reductase family IQE94_09240 PF00152 tRNA synthetases class II (D, K and N) IQE94_09240 PF01336 OB-fold nucleic acid binding domain IQE94_09260 PF02080 TrkA-C domain IQE94_09260 PF02254 TrkA-N domain IQE94_09265 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IQE94_09265 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IQE94_09270 PF00731 AIR carboxylase IQE94_09275 PF00436 Single-strand binding protein family IQE94_09285 PF01040 UbiA prenyltransferase family IQE94_09290 PF00124 Photosynthetic reaction centre protein IQE94_09295 PF13614 AAA domain IQE94_09305 PF01169 Uncharacterized protein family UPF0016 IQE94_09310 PF01634 ATP phosphoribosyltransferase IQE94_09315 PF00132 Bacterial transferase hexapeptide (six repeats) IQE94_09315 PF12804 MobA-like NTP transferase domain IQE94_09325 PF03193 RsgA GTPase IQE94_09335 PF00684 DnaJ central domain IQE94_09335 PF01556 DnaJ C terminal domain IQE94_09335 PF00226 DnaJ domain IQE94_09340 PF02075 Crossover junction endodeoxyribonuclease RuvC IQE94_09345 PF00459 Inositol monophosphatase family IQE94_09350 PF00218 Indole-3-glycerol phosphate synthase IQE94_09355 PF00909 Ammonium Transporter Family IQE94_09355 PF00672 HAMP domain IQE94_09360 PF02254 TrkA-N domain IQE94_09360 PF02080 TrkA-C domain IQE94_09375 PF07724 AAA domain (Cdc48 subfamily) IQE94_09375 PF10431 C-terminal, D2-small domain, of ClpB protein IQE94_09375 PF06689 ClpX C4-type zinc finger IQE94_09380 PF00574 Clp protease IQE94_09385 PF05698 Bacterial trigger factor protein (TF) C-terminus IQE94_09385 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IQE94_09385 PF05697 Bacterial trigger factor protein (TF) IQE94_09390 PF01118 Semialdehyde dehydrogenase, NAD binding domain IQE94_09390 PF02774 Semialdehyde dehydrogenase, dimerisation domain IQE94_09395 PF00701 Dihydrodipicolinate synthetase family IQE94_09400 PF00753 Metallo-beta-lactamase superfamily IQE94_09400 PF17770 Ribonuclease J C-terminal domain IQE94_09400 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain IQE94_09410 PF01121 Dephospho-CoA kinase IQE94_09415 PF12965 Domain of unknown function (DUF3854) IQE94_09425 PF12706 Beta-lactamase superfamily domain IQE94_09460 PF00101 Ribulose bisphosphate carboxylase, small chain IQE94_09465 PF03319 Ethanolamine utilisation protein EutN/carboxysome IQE94_09470 PF00936 BMC domain IQE94_09475 PF00936 BMC domain IQE94_09480 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster IQE94_09480 PF07992 Pyridine nucleotide-disulphide oxidoreductase IQE94_09485 PF04966 Carbohydrate-selective porin, OprB family IQE94_09510 PF13519 von Willebrand factor type A domain IQE94_09510 PF01078 Magnesium chelatase, subunit ChlI IQE94_09510 PF17863 AAA lid domain IQE94_09540 PF01276 Orn/Lys/Arg decarboxylase, major domain IQE94_09540 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain IQE94_09545 PF01262 Alanine dehydrogenase/PNT, C-terminal domain IQE94_09545 PF05222 Alanine dehydrogenase/PNT, N-terminal domain IQE94_09550 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ IQE94_09555 PF10674 Protein of unknown function (DUF2488) IQE94_09570 PF01641 SelR domain IQE94_09575 PF13180 PDZ domain IQE94_09580 PF00072 Response regulator receiver domain IQE94_09580 PF00486 Transcriptional regulatory protein, C terminal IQE94_09585 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IQE94_09585 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IQE94_09590 PF07670 Nucleoside recognition IQE94_09595 PF07670 Nucleoside recognition IQE94_09600 PF02446 4-alpha-glucanotransferase IQE94_09610 PF00586 AIR synthase related protein, N-terminal domain IQE94_09610 PF02769 AIR synthase related protein, C-terminal domain IQE94_09615 PF01590 GAF domain IQE94_09615 PF00360 Phytochrome region IQE94_09615 PF00990 Diguanylate cyclase, GGDEF domain IQE94_09615 PF00563 EAL domain IQE94_09620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IQE94_09620 PF00512 His Kinase A (phospho-acceptor) domain IQE94_09620 PF00072 Response regulator receiver domain IQE94_09620 PF09308 LuxQ, periplasmic IQE94_09635 PF03653 Uncharacterised protein family (UPF0093) IQE94_09640 PF01507 Phosphoadenosine phosphosulfate reductase family IQE94_09645 PF01628 HrcA protein C terminal domain IQE94_09655 PF01202 Shikimate kinase IQE94_09660 PF13202 EF hand IQE94_09660 PF00923 Transaldolase/Fructose-6-phosphate aldolase IQE94_09670 PF02374 Anion-transporting ATPase IQE94_09670 PF17886 HSP20-like domain found in ArsA IQE94_09675 PF01625 Peptide methionine sulfoxide reductase IQE94_09690 PF00226 DnaJ domain IQE94_09690 PF01556 DnaJ C terminal domain IQE94_09690 PF00684 DnaJ central domain IQE94_09705 PF00535 Glycosyl transferase family 2 IQE94_09705 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 IQE94_09715 PF01842 ACT domain IQE94_09715 PF01817 Chorismate mutase type II IQE94_09715 PF00800 Prephenate dehydratase IQE94_09725 PF00990 Diguanylate cyclase, GGDEF domain IQE94_09725 PF00360 Phytochrome region IQE94_09725 PF01590 GAF domain IQE94_09725 PF00563 EAL domain IQE94_09745 PF05190 MutS family domain IV IQE94_09745 PF00488 MutS domain V IQE94_09745 PF05192 MutS domain III IQE94_09745 PF01624 MutS domain I IQE94_09745 PF05188 MutS domain II IQE94_09750 PF04542 Sigma-70 region 2 IQE94_09750 PF08281 Sigma-70, region 4 IQE94_09765 PF00875 DNA photolyase IQE94_09765 PF03441 FAD binding domain of DNA photolyase IQE94_09790 PF01177 Asp/Glu/Hydantoin racemase IQE94_09795 PF01520 N-acetylmuramoyl-L-alanine amidase IQE94_09800 PF07992 Pyridine nucleotide-disulphide oxidoreductase IQE94_09805 PF07685 CobB/CobQ-like glutamine amidotransferase domain IQE94_09820 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IQE94_09825 PF03912 Psb28 protein IQE94_09835 PF01475 Ferric uptake regulator family IQE94_09840 PF08534 Redoxin IQE94_09870 PF05221 S-adenosyl-L-homocysteine hydrolase IQE94_09870 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain IQE94_09890 PF00512 His Kinase A (phospho-acceptor) domain IQE94_09890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IQE94_09895 PF05175 Methyltransferase small domain IQE94_09900 PF01523 Putative modulator of DNA gyrase IQE94_09920 PF01761 3-dehydroquinate synthase IQE94_09930 PF00490 Delta-aminolevulinic acid dehydratase IQE94_09970 PF00535 Glycosyl transferase family 2 IQE94_09975 PF00535 Glycosyl transferase family 2 IQE94_09985 PF03407 Nucleotide-diphospho-sugar transferase IQE94_09990 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family IQE94_09995 PF16363 GDP-mannose 4,6 dehydratase IQE94_10000 PF08241 Methyltransferase domain IQE94_10025 PF01609 Transposase DDE domain IQE94_10035 PF01209 ubiE/COQ5 methyltransferase family IQE94_10045 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system IQE94_10050 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system IQE94_10075 PF00436 Single-strand binding protein family IQE94_10080 PF00579 tRNA synthetases class I (W and Y) IQE94_10080 PF01479 S4 domain IQE94_10085 PF17863 AAA lid domain IQE94_10085 PF01078 Magnesium chelatase, subunit ChlI IQE94_10095 PF08240 Alcohol dehydrogenase GroES-like domain IQE94_10095 PF00107 Zinc-binding dehydrogenase IQE94_10100 PF00756 Putative esterase IQE94_10120 PF00202 Aminotransferase class-III IQE94_10160 PF04055 Radical SAM superfamily IQE94_10160 PF01938 TRAM domain IQE94_10160 PF00919 Uncharacterized protein family UPF0004 IQE94_10170 PF02397 Bacterial sugar transferase IQE94_10180 PF00795 Carbon-nitrogen hydrolase IQE94_10190 PF00425 chorismate binding enzyme IQE94_10200 PF03099 Biotin/lipoate A/B protein ligase family IQE94_10205 PF13167 GTP-binding GTPase N-terminal IQE94_10205 PF01926 50S ribosome-binding GTPase IQE94_10205 PF16360 GTP-binding GTPase Middle Region IQE94_10210 PF00248 Aldo/keto reductase family IQE94_10220 PF01040 UbiA prenyltransferase family IQE94_10230 PF00180 Isocitrate/isopropylmalate dehydrogenase IQE94_10235 PF02777 Iron/manganese superoxide dismutases, C-terminal domain IQE94_10235 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain IQE94_10255 PF11264 Thylakoid formation protein IQE94_10260 PF01513 ATP-NAD kinase IQE94_10280 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IQE94_10280 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IQE94_10285 PF02504 Fatty acid synthesis protein IQE94_10295 PF02386 Cation transport protein IQE94_10300 PF13439 Glycosyltransferase Family 4 IQE94_10305 PF06463 Molybdenum Cofactor Synthesis C IQE94_10305 PF04055 Radical SAM superfamily IQE94_10325 PF13546 DDE superfamily endonuclease IQE94_10330 PF00583 Acetyltransferase (GNAT) family IQE94_10345 PF00005 ABC transporter IQE94_10345 PF03459 TOBE domain IQE94_10360 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus IQE94_10360 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus IQE94_10365 PF00583 Acetyltransferase (GNAT) family IQE94_10370 PF00120 Glutamine synthetase, catalytic domain IQE94_10370 PF03951 Glutamine synthetase, beta-Grasp domain IQE94_10375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IQE94_10375 PF00672 HAMP domain IQE94_10375 PF00512 His Kinase A (phospho-acceptor) domain IQE94_10375 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) IQE94_10375 PF00072 Response regulator receiver domain IQE94_10375 PF01627 Hpt domain IQE94_10380 PF01590 GAF domain IQE94_10380 PF00990 Diguanylate cyclase, GGDEF domain IQE94_10380 PF00360 Phytochrome region IQE94_10380 PF00563 EAL domain IQE94_10385 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IQE94_10390 PF01812 5-formyltetrahydrofolate cyclo-ligase family IQE94_10405 PF00282 Pyridoxal-dependent decarboxylase conserved domain IQE94_10420 PF00795 Carbon-nitrogen hydrolase IQE94_10425 PF01774 UreD urease accessory protein IQE94_10445 PF06426 Serine acetyltransferase, N-terminal IQE94_10445 PF00132 Bacterial transferase hexapeptide (six repeats) IQE94_10465 PF01738 Dienelactone hydrolase family IQE94_10470 PF00871 Acetokinase family IQE94_10475 PF02390 Putative methyltransferase IQE94_10480 PF02322 Cytochrome bd terminal oxidase subunit II IQE94_10485 PF01654 Cytochrome bd terminal oxidase subunit I IQE94_10495 PF10502 Signal peptidase, peptidase S26 IQE94_10505 PF01209 ubiE/COQ5 methyltransferase family IQE94_10525 PF01266 FAD dependent oxidoreductase IQE94_10525 PF05430 S-adenosyl-L-methionine-dependent methyltransferase IQE94_10530 PF00072 Response regulator receiver domain IQE94_10530 PF00486 Transcriptional regulatory protein, C terminal IQE94_10540 PF00924 Mechanosensitive ion channel IQE94_10550 PF02789 Cytosol aminopeptidase family, N-terminal domain IQE94_10550 PF00883 Cytosol aminopeptidase family, catalytic domain IQE94_10565 PF13439 Glycosyltransferase Family 4 IQE94_10565 PF00534 Glycosyl transferases group 1 IQE94_10570 PF00072 Response regulator receiver domain IQE94_10575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IQE94_10575 PF00512 His Kinase A (phospho-acceptor) domain IQE94_10575 PF01627 Hpt domain IQE94_10575 PF00497 Bacterial extracellular solute-binding proteins, family 3 IQE94_10575 PF00072 Response regulator receiver domain IQE94_10575 PF00989 PAS fold IQE94_10580 PF02874 ATP synthase alpha/beta family, beta-barrel domain IQE94_10580 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IQE94_10585 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain IQE94_10585 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain IQE94_10595 PF00109 Beta-ketoacyl synthase, N-terminal domain IQE94_10595 PF02801 Beta-ketoacyl synthase, C-terminal domain IQE94_10600 PF00374 Nickel-dependent hydrogenase IQE94_10615 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit IQE94_10620 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal IQE94_10620 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region IQE94_10620 PF00384 Molybdopterin oxidoreductase IQE94_10630 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region IQE94_10630 PF00037 4Fe-4S binding domain IQE94_10630 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit IQE94_10645 PF01924 Hydrogenase formation hypA family IQE94_10650 PF04321 RmlD substrate binding domain IQE94_10655 PF01625 Peptide methionine sulfoxide reductase IQE94_10660 PF00534 Glycosyl transferases group 1 IQE94_10660 PF08323 Starch synthase catalytic domain IQE94_10675 PF00005 ABC transporter IQE94_10675 PF13732 Domain of unknown function (DUF4162) IQE94_10690 PF00924 Mechanosensitive ion channel IQE94_10720 PF00950 ABC 3 transport family IQE94_10725 PF00005 ABC transporter IQE94_10730 PF01297 Zinc-uptake complex component A periplasmic IQE94_10755 PF04168 A predicted alpha-helical domain with a conserved ER motif. IQE94_10755 PF14403 Circularly permuted ATP-grasp type 2 IQE94_10765 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IQE94_10765 PF07992 Pyridine nucleotide-disulphide oxidoreductase IQE94_10780 PF02441 Flavoprotein IQE94_10790 PF00582 Universal stress protein family IQE94_10795 PF00498 FHA domain IQE94_10795 PF00990 Diguanylate cyclase, GGDEF domain IQE94_10795 PF00563 EAL domain IQE94_10800 PF00990 Diguanylate cyclase, GGDEF domain IQE94_10800 PF00498 FHA domain IQE94_10800 PF00563 EAL domain IQE94_10805 PF00563 EAL domain IQE94_10805 PF00990 Diguanylate cyclase, GGDEF domain IQE94_10805 PF03707 Bacterial signalling protein N terminal repeat IQE94_10810 PF00679 Elongation factor G C-terminus IQE94_10810 PF14492 Elongation Factor G, domain II IQE94_10810 PF00009 Elongation factor Tu GTP binding domain IQE94_10810 PF03144 Elongation factor Tu domain 2 IQE94_10830 PF13180 PDZ domain IQE94_10840 PF03129 Anticodon binding domain IQE94_10840 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IQE94_10840 PF04073 Aminoacyl-tRNA editing domain IQE94_10850 PF11283 Protein of unknown function (DUF3084) IQE94_10855 PF00027 Cyclic nucleotide-binding domain IQE94_10855 PF13545 Crp-like helix-turn-helix domain IQE94_10870 PF00274 Fructose-bisphosphate aldolase class-I IQE94_10875 PF00248 Aldo/keto reductase family IQE94_10880 PF13426 PAS domain IQE94_10880 PF00072 Response regulator receiver domain IQE94_10880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IQE94_10885 PF03707 Bacterial signalling protein N terminal repeat IQE94_10885 PF00990 Diguanylate cyclase, GGDEF domain IQE94_10885 PF00563 EAL domain IQE94_10895 PF00805 Pentapeptide repeats (8 copies) IQE94_10900 PF07282 Putative transposase DNA-binding domain IQE94_10900 PF01385 Probable transposase IQE94_10900 PF12323 Helix-turn-helix domain IQE94_10905 PF00293 NUDIX domain IQE94_10905 PF09297 NADH pyrophosphatase zinc ribbon domain IQE94_10910 PF00206 Lyase IQE94_10910 PF14698 Argininosuccinate lyase C-terminal IQE94_10920 PF07228 Stage II sporulation protein E (SpoIIE) IQE94_10920 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain IQE94_10940 PF00862 Sucrose synthase IQE94_10940 PF00534 Glycosyl transferases group 1 IQE94_10945 PF08206 Ribonuclease B OB domain IQE94_10945 PF17876 Cold shock domain IQE94_10945 PF00773 RNB domain IQE94_10945 PF00575 S1 RNA binding domain IQE94_10965 PF07992 Pyridine nucleotide-disulphide oxidoreductase IQE94_10965 PF01571 Aminomethyltransferase folate-binding domain IQE94_10965 PF17806 Sarcosine oxidase A3 domain IQE94_10965 PF08669 Glycine cleavage T-protein C-terminal barrel domain IQE94_10975 PF00809 Pterin binding enzyme IQE94_10985 PF01467 Cytidylyltransferase-like IQE94_10990 PF04055 Radical SAM superfamily IQE94_11000 PF00486 Transcriptional regulatory protein, C terminal IQE94_11000 PF00072 Response regulator receiver domain IQE94_11005 PF00698 Acyl transferase domain IQE94_11010 PF00403 Heavy-metal-associated domain IQE94_11025 PF00664 ABC transporter transmembrane region IQE94_11025 PF00005 ABC transporter IQE94_11050 PF13545 Crp-like helix-turn-helix domain IQE94_11050 PF00027 Cyclic nucleotide-binding domain IQE94_11085 PF00361 Proton-conducting membrane transporter IQE94_11090 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L IQE94_11115 PF00005 ABC transporter IQE94_11115 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IQE94_11125 PF17092 Penicillin-binding protein OB-like domain IQE94_11125 PF00912 Transglycosylase IQE94_11125 PF00905 Penicillin binding protein transpeptidase domain IQE94_11140 PF14579 Helix-hairpin-helix motif IQE94_11140 PF02811 PHP domain IQE94_11140 PF07733 Bacterial DNA polymerase III alpha NTPase domain IQE94_11140 PF01336 OB-fold nucleic acid binding domain IQE94_11140 PF17657 Bacterial DNA polymerase III alpha subunit finger domain IQE94_11145 PF01551 Peptidase family M23 IQE94_11155 PF01370 NAD dependent epimerase/dehydratase family IQE94_11160 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family IQE94_11170 PF00069 Protein kinase domain IQE94_11190 PF00502 Phycobilisome protein IQE94_11195 PF00502 Phycobilisome protein IQE94_11200 PF01383 CpcD/allophycocyanin linker domain IQE94_11200 PF00427 Phycobilisome Linker polypeptide IQE94_11205 PF01383 CpcD/allophycocyanin linker domain IQE94_11205 PF00427 Phycobilisome Linker polypeptide IQE94_11210 PF01383 CpcD/allophycocyanin linker domain IQE94_11215 PF02403 Seryl-tRNA synthetase N-terminal domain IQE94_11215 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IQE94_11230 PF02563 Polysaccharide biosynthesis/export protein IQE94_11230 PF10531 SLBB domain IQE94_11230 PF18412 Outer-membrane lipoprotein Wza C-terminal domain IQE94_11240 PF03119 NAD-dependent DNA ligase C4 zinc finger domain IQE94_11240 PF03120 NAD-dependent DNA ligase OB-fold domain IQE94_11240 PF12826 Helix-hairpin-helix motif IQE94_11240 PF00533 BRCA1 C Terminus (BRCT) domain IQE94_11240 PF01653 NAD-dependent DNA ligase adenylation domain IQE94_11255 PF08486 Stage II sporulation protein IQE94_11265 PF04055 Radical SAM superfamily IQE94_11280 PF13546 DDE superfamily endonuclease IQE94_11295 PF14572 Phosphoribosyl synthetase-associated domain IQE94_11295 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase IQE94_11305 PF02547 Queuosine biosynthesis protein IQE94_11310 PF01594 AI-2E family transporter IQE94_11325 PF13545 Crp-like helix-turn-helix domain IQE94_11330 PF02685 Glucokinase IQE94_11335 PF00005 ABC transporter IQE94_11335 PF00664 ABC transporter transmembrane region IQE94_11365 PF00672 HAMP domain IQE94_11365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IQE94_11365 PF18698 Histidine kinase sensor domain IQE94_11365 PF00512 His Kinase A (phospho-acceptor) domain IQE94_11365 PF00989 PAS fold IQE94_11370 PF02681 Divergent PAP2 family IQE94_11380 PF00440 Bacterial regulatory proteins, tetR family IQE94_11390 PF13546 DDE superfamily endonuclease IQE94_11400 PF00557 Metallopeptidase family M24 IQE94_11405 PF00106 short chain dehydrogenase IQE94_11420 PF02525 Flavodoxin-like fold IQE94_11430 PF02798 Glutathione S-transferase, N-terminal domain IQE94_11430 PF00043 Glutathione S-transferase, C-terminal domain IQE94_11455 PF00588 SpoU rRNA Methylase family IQE94_11455 PF08032 RNA 2'-O ribose methyltransferase substrate binding IQE94_11460 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IQE94_11460 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IQE94_11470 PF00982 Glycosyltransferase family 20 IQE94_11475 PF01266 FAD dependent oxidoreductase IQE94_11475 PF16901 C-terminal domain of alpha-glycerophosphate oxidase IQE94_11525 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IQE94_11525 PF01872 RibD C-terminal domain IQE94_11535 PF05193 Peptidase M16 inactive domain IQE94_11535 PF00675 Insulinase (Peptidase family M16) IQE94_11540 PF01883 Iron-sulfur cluster assembly protein IQE94_11540 PF10609 NUBPL iron-transfer P-loop NTPase IQE94_11545 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain IQE94_11545 PF00117 Glutamine amidotransferase class-I IQE94_11555 PF00483 Nucleotidyl transferase IQE94_11580 PF01048 Phosphorylase superfamily IQE94_11585 PF00557 Metallopeptidase family M24 IQE94_11585 PF05195 Aminopeptidase P, N-terminal domain IQE94_11590 PF00574 Clp protease IQE94_11595 PF00574 Clp protease IQE94_11680 PF00482 Type II secretion system (T2SS), protein F IQE94_11685 PF00437 Type II/IV secretion system protein IQE94_11695 PF00873 AcrB/AcrD/AcrF family IQE94_11710 PF02861 Clp amino terminal domain, pathogenicity island component IQE94_11710 PF10431 C-terminal, D2-small domain, of ClpB protein IQE94_11710 PF07724 AAA domain (Cdc48 subfamily) IQE94_11710 PF17871 AAA lid domain IQE94_11710 PF00004 ATPase family associated with various cellular activities (AAA) IQE94_11720 PF00696 Amino acid kinase family IQE94_11725 PF01765 Ribosome recycling factor IQE94_11730 PF02653 Branched-chain amino acid transport system / permease component IQE94_11730 PF11862 Domain of unknown function (DUF3382) IQE94_11745 PF00942 Cellulose binding domain IQE94_11745 PF00553 Cellulose binding domain IQE94_11745 PF00041 Fibronectin type III domain IQE94_11745 PF00759 Glycosyl hydrolase family 9 IQE94_11790 PF02607 B12 binding domain IQE94_11790 PF02965 Vitamin B12 dependent methionine synthase, activation domain IQE94_11790 PF00809 Pterin binding enzyme IQE94_11790 PF02574 Homocysteine S-methyltransferase IQE94_11790 PF02310 B12 binding domain IQE94_11795 PF01809 Putative membrane protein insertion efficiency factor IQE94_11810 PF00512 His Kinase A (phospho-acceptor) domain IQE94_11810 PF00989 PAS fold IQE94_11810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IQE94_11820 PF02941 Ferredoxin thioredoxin reductase variable alpha chain IQE94_11835 PF00749 tRNA synthetases class I (E and Q), catalytic domain IQE94_11845 PF03061 Thioesterase superfamily IQE94_11850 PF13533 Biotin-lipoyl like IQE94_11855 PF00005 ABC transporter IQE94_11855 PF06472 ABC transporter transmembrane region 2 IQE94_11870 PF02325 YGGT family IQE94_11875 PF02754 Cysteine-rich domain IQE94_11885 PF00140 Sigma-70 factor, region 1.2 IQE94_11885 PF04542 Sigma-70 region 2 IQE94_11885 PF04539 Sigma-70 region 3 IQE94_11885 PF04545 Sigma-70, region 4 IQE94_11890 PF13230 Glutamine amidotransferases class-II IQE94_11900 PF13091 PLD-like domain IQE94_11915 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) IQE94_11925 PF00581 Rhodanese-like domain IQE94_11930 PF04122 Putative cell wall binding repeat 2 IQE94_11930 PF08486 Stage II sporulation protein IQE94_11940 PF02021 Uncharacterised protein family UPF0102 IQE94_11945 PF02464 Competence-damaged protein IQE94_11945 PF18146 Damage-inducible protein CinA KH domain IQE94_11945 PF00994 Probable molybdopterin binding domain IQE94_11950 PF01227 GTP cyclohydrolase I IQE94_11955 PF00156 Phosphoribosyl transferase domain IQE94_11965 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain IQE94_11965 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IQE94_11965 PF02142 MGS-like domain IQE94_11980 PF00171 Aldehyde dehydrogenase family IQE94_11985 PF00005 ABC transporter IQE94_12005 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase IQE94_12015 PF00676 Dehydrogenase E1 component IQE94_12035 PF00334 Nucleoside diphosphate kinase IQE94_12050 PF00355 Rieske [2Fe-2S] domain IQE94_12055 PF01008 Initiation factor 2 subunit family IQE94_12065 PF01435 Peptidase family M48 IQE94_12095 PF06745 KaiC IQE94_12105 PF00535 Glycosyl transferase family 2 IQE94_12115 PF01676 Metalloenzyme superfamily IQE94_12115 PF06415 BPG-independent PGAM N-terminus (iPGM_N) IQE94_12130 PF02817 e3 binding domain IQE94_12130 PF00364 Biotin-requiring enzyme IQE94_12130 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IQE94_12135 PF01381 Helix-turn-helix IQE94_12140 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB IQE94_12145 PF03781 Sulfatase-modifying factor enzyme 1 IQE94_12150 PF00805 Pentapeptide repeats (8 copies) IQE94_12150 PF00069 Protein kinase domain IQE94_12155 PF11780 Protein of unknown function (DUF3318) IQE94_12160 PF00403 Heavy-metal-associated domain IQE94_12170 PF01709 Transcriptional regulator IQE94_12175 PF04107 Glutamate-cysteine ligase family 2(GCS2) IQE94_12180 PF00588 SpoU rRNA Methylase family IQE94_12185 PF08525 Opacity-associated protein A N-terminal motif IQE94_12185 PF01551 Peptidase family M23 IQE94_12185 PF01476 LysM domain IQE94_12190 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein IQE94_12190 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus IQE94_12195 PF03099 Biotin/lipoate A/B protein ligase family IQE94_12210 PF08323 Starch synthase catalytic domain IQE94_12210 PF00534 Glycosyl transferases group 1 IQE94_12215 PF08865 Domain of unknown function (DUF1830) IQE94_12225 PF04545 Sigma-70, region 4 IQE94_12225 PF04539 Sigma-70 region 3 IQE94_12225 PF00140 Sigma-70 factor, region 1.2 IQE94_12225 PF04542 Sigma-70 region 2 IQE94_12230 PF01926 50S ribosome-binding GTPase IQE94_12230 PF07650 KH domain IQE94_12235 PF02895 Signal transducing histidine kinase, homodimeric domain IQE94_12235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IQE94_12235 PF00072 Response regulator receiver domain IQE94_12235 PF01627 Hpt domain IQE94_12235 PF02895 Signal transducing histidine kinase, homodimeric domain IQE94_12235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IQE94_12235 PF01627 Hpt domain IQE94_12235 PF00072 Response regulator receiver domain IQE94_12235 PF01584 CheW-like domain IQE94_12235 PF01584 CheW-like domain IQE94_12245 PF00528 Binding-protein-dependent transport system inner membrane component IQE94_12255 PF00805 Pentapeptide repeats (8 copies) IQE94_12260 PF00293 NUDIX domain IQE94_12265 PF02261 Aspartate decarboxylase IQE94_12270 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain IQE94_12270 PF00056 lactate/malate dehydrogenase, NAD binding domain IQE94_12275 PF11910 Cyanobacterial and plant NDH-1 subunit O IQE94_12285 PF01195 Peptidyl-tRNA hydrolase IQE94_12290 PF04839 Plastid and cyanobacterial ribosomal protein (PSRP-3 / Ycf65) IQE94_12300 PF13458 Periplasmic binding protein IQE94_12305 PF00999 Sodium/hydrogen exchanger family IQE94_12305 PF02080 TrkA-C domain IQE94_12305 PF03471 Transporter associated domain IQE94_12315 PF00557 Metallopeptidase family M24 IQE94_12320 PF02943 Ferredoxin thioredoxin reductase catalytic beta chain IQE94_12325 PF12697 Alpha/beta hydrolase family IQE94_12335 PF07884 Vitamin K epoxide reductase family IQE94_12340 PF01613 Flavin reductase like domain IQE94_12340 PF00753 Metallo-beta-lactamase superfamily IQE94_12350 PF11074 Domain of unknown function(DUF2779) IQE94_12360 PF01253 Translation initiation factor SUI1 IQE94_12400 PF01928 CYTH domain IQE94_12405 PF01968 Hydantoinase/oxoprolinase IQE94_12405 PF05378 Hydantoinase/oxoprolinase N-terminal region IQE94_12410 PF01679 Proteolipid membrane potential modulator IQE94_12420 PF00440 Bacterial regulatory proteins, tetR family IQE94_12425 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IQE94_12435 PF00005 ABC transporter IQE94_12435 PF02687 FtsX-like permease family IQE94_12435 PF12704 MacB-like periplasmic core domain IQE94_12440 PF00101 Ribulose bisphosphate carboxylase, small chain IQE94_12445 PF02341 RbcX protein IQE94_12450 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain IQE94_12450 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain IQE94_12455 PF03572 Peptidase family S41 IQE94_12455 PF00595 PDZ domain IQE94_12470 PF06725 3D domain IQE94_12470 PF03562 MltA specific insert domain IQE94_12475 PF00202 Aminotransferase class-III IQE94_12480 PF01116 Fructose-bisphosphate aldolase class-II IQE94_12485 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain IQE94_12485 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase IQE94_12485 PF13288 DXP reductoisomerase C-terminal domain IQE94_12495 PF00004 ATPase family associated with various cellular activities (AAA) IQE94_12495 PF07724 AAA domain (Cdc48 subfamily) IQE94_12495 PF17871 AAA lid domain IQE94_12495 PF02861 Clp amino terminal domain, pathogenicity island component IQE94_12495 PF10431 C-terminal, D2-small domain, of ClpB protein IQE94_12535 PF13393 Histidyl-tRNA synthetase IQE94_12535 PF03129 Anticodon binding domain IQE94_12545 PF00069 Protein kinase domain IQE94_12545 PF00805 Pentapeptide repeats (8 copies) IQE94_12550 PF00528 Binding-protein-dependent transport system inner membrane component IQE94_12560 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase IQE94_12605 PF00696 Amino acid kinase family IQE94_12605 PF13840 ACT domain IQE94_12615 PF01432 Peptidase family M3 IQE94_12620 PF03807 NADP oxidoreductase coenzyme F420-dependent IQE94_12620 PF14748 Pyrroline-5-carboxylate reductase dimerisation IQE94_12635 PF17810 Arginine decarboxylase helical bundle domain IQE94_12635 PF17944 Arginine decarboxylase C-terminal helical extension IQE94_12635 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain IQE94_12645 PF02445 Quinolinate synthetase A protein IQE94_12655 PF11791 Aconitate B N-terminal domain IQE94_12655 PF00330 Aconitase family (aconitate hydratase) IQE94_12655 PF06434 Aconitate hydratase 2 N-terminus IQE94_12670 PF13546 DDE superfamily endonuclease IQE94_12680 PF13546 DDE superfamily endonuclease IQE94_12690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IQE94_12690 PF00512 His Kinase A (phospho-acceptor) domain IQE94_12690 PF00989 PAS fold IQE94_12695 PF01039 Carboxyl transferase domain IQE94_12695 PF17848 Acetyl-coA carboxylase zinc finger domain IQE94_12700 PF14403 Circularly permuted ATP-grasp type 2 IQE94_12710 PF00004 ATPase family associated with various cellular activities (AAA) IQE94_12710 PF17862 AAA+ lid domain IQE94_12710 PF06480 FtsH Extracellular IQE94_12710 PF01434 Peptidase family M41 IQE94_12725 PF01804 Penicillin amidase IQE94_12730 PF02223 Thymidylate kinase IQE94_12740 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IQE94_12755 PF00534 Glycosyl transferases group 1 IQE94_12755 PF13439 Glycosyltransferase Family 4 IQE94_12760 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain IQE94_12760 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IQE94_12770 PF00266 Aminotransferase class-V IQE94_12775 PF00156 Phosphoribosyl transferase domain IQE94_12780 PF03734 L,D-transpeptidase catalytic domain IQE94_12780 PF01476 LysM domain IQE94_12800 PF08369 Proto-chlorophyllide reductase 57 kD subunit IQE94_12800 PF00148 Nitrogenase component 1 type Oxidoreductase IQE94_12810 PF04966 Carbohydrate-selective porin, OprB family IQE94_12815 PF00083 Sugar (and other) transporter IQE94_12820 PF03793 PASTA domain IQE94_12820 PF00069 Protein kinase domain IQE94_12830 PF00271 Helicase conserved C-terminal domain IQE94_12830 PF00176 SNF2 family N-terminal domain IQE94_12835 PF05685 Putative restriction endonuclease IQE94_12845 PF07549 SecD/SecF GG Motif IQE94_12845 PF02355 Protein export membrane protein IQE94_12850 PF07549 SecD/SecF GG Motif IQE94_12850 PF02355 Protein export membrane protein IQE94_12855 PF00132 Bacterial transferase hexapeptide (six repeats) IQE94_12855 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD IQE94_12860 PF00453 Ribosomal protein L20 IQE94_12865 PF01632 Ribosomal protein L35 IQE94_12870 PF04002 RadC-like JAB domain IQE94_12875 PF00581 Rhodanese-like domain IQE94_12875 PF17773 UPF0176 acylphosphatase like domain IQE94_12890 PF17755 UvrA DNA-binding domain IQE94_12890 PF17760 UvrA interaction domain IQE94_12900 PF02492 CobW/HypB/UreG, nucleotide-binding domain IQE94_12905 PF01590 GAF domain IQE94_12905 PF00990 Diguanylate cyclase, GGDEF domain IQE94_12905 PF00360 Phytochrome region IQE94_12905 PF00563 EAL domain IQE94_12915 PF03600 Citrate transporter IQE94_12915 PF02080 TrkA-C domain IQE94_12950 PF17792 ThiD2 family IQE94_12950 PF02581 Thiamine monophosphate synthase IQE94_12955 PF03437 BtpA family IQE94_12980 PF00849 RNA pseudouridylate synthase IQE94_12985 PF00563 EAL domain IQE94_12985 PF01590 GAF domain IQE94_12985 PF00990 Diguanylate cyclase, GGDEF domain IQE94_12985 PF00360 Phytochrome region IQE94_13000 PF03040 CemA family IQE94_13010 PF13614 AAA domain IQE94_13015 PF05552 Conserved TM helix IQE94_13020 PF00011 Hsp20/alpha crystallin family IQE94_13025 PF01578 Cytochrome C assembly protein IQE94_13030 PF01638 HxlR-like helix-turn-helix IQE94_13035 PF04055 Radical SAM superfamily IQE94_13050 PF04483 Protein of unknown function (DUF565) IQE94_13065 PF07465 Photosystem I protein M (PsaM) IQE94_13075 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase IQE94_13100 PF17862 AAA+ lid domain IQE94_13100 PF06480 FtsH Extracellular IQE94_13100 PF01434 Peptidase family M41 IQE94_13100 PF00004 ATPase family associated with various cellular activities (AAA) IQE94_13125 PF00155 Aminotransferase class I and II IQE94_13130 PF03109 ABC1 family IQE94_13145 PF00271 Helicase conserved C-terminal domain IQE94_13145 PF00270 DEAD/DEAH box helicase IQE94_13145 PF17191 RecG wedge domain IQE94_13150 PF01343 Peptidase family S49 IQE94_13155 PF00905 Penicillin binding protein transpeptidase domain IQE94_13155 PF00912 Transglycosylase IQE94_13165 PF00117 Glutamine amidotransferase class-I IQE94_13165 PF00958 GMP synthase C terminal domain IQE94_13170 PF00145 C-5 cytosine-specific DNA methylase IQE94_13260 PF03793 PASTA domain IQE94_13260 PF00069 Protein kinase domain IQE94_13265 PF02673 Bacitracin resistance protein BacA IQE94_13285 PF01488 Shikimate / quinate 5-dehydrogenase IQE94_13290 PF11266 Long-chain fatty aldehyde decarbonylase IQE94_13295 PF00483 Nucleotidyl transferase IQE94_13300 PF05746 DALR anticodon binding domain IQE94_13300 PF02092 Glycyl-tRNA synthetase beta subunit IQE94_13310 PF09335 SNARE associated Golgi protein IQE94_13315 PF00085 Thioredoxin IQE94_13320 PF13640 2OG-Fe(II) oxygenase superfamily IQE94_13325 PF00118 TCP-1/cpn60 chaperonin family IQE94_13330 PF00005 ABC transporter IQE94_13345 PF03781 Sulfatase-modifying factor enzyme 1 IQE94_13360 PF04286 Protein of unknown function (DUF445) IQE94_13365 PF03061 Thioesterase superfamily IQE94_13370 PF13378 Enolase C-terminal domain-like IQE94_13375 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IQE94_13380 PF01132 Elongation factor P (EF-P) OB domain IQE94_13380 PF08207 Elongation factor P (EF-P) KOW-like domain IQE94_13380 PF09285 Elongation factor P, C-terminal IQE94_13385 PF00364 Biotin-requiring enzyme IQE94_13390 PF00936 BMC domain IQE94_13410 PF01565 FAD binding domain IQE94_13410 PF02913 FAD linked oxidases, C-terminal domain IQE94_13425 PF00085 Thioredoxin IQE94_13435 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded IQE94_13440 PF13673 Acetyltransferase (GNAT) domain IQE94_13465 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system IQE94_13475 PF00072 Response regulator receiver domain IQE94_13475 PF00196 Bacterial regulatory proteins, luxR family IQE94_13485 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family IQE94_13490 PF01678 Diaminopimelate epimerase IQE94_13510 PF02541 Ppx/GppA phosphatase family IQE94_13515 PF03652 Holliday junction resolvase IQE94_13520 PF00999 Sodium/hydrogen exchanger family IQE94_13545 PF00563 EAL domain IQE94_13545 PF01590 GAF domain IQE94_13545 PF00990 Diguanylate cyclase, GGDEF domain IQE94_13545 PF00360 Phytochrome region IQE94_13550 PF03033 Glycosyltransferase family 28 N-terminal domain IQE94_13550 PF04101 Glycosyltransferase family 28 C-terminal domain IQE94_13555 PF00796 Photosystem I reaction centre subunit VIII IQE94_13560 PF02605 Photosystem I reaction centre subunit XI IQE94_13565 PF04966 Carbohydrate-selective porin, OprB family IQE94_13570 PF07687 Peptidase dimerisation domain IQE94_13570 PF01546 Peptidase family M20/M25/M40 IQE94_13620 PF06745 KaiC IQE94_13625 PF07689 KaiB domain IQE94_13630 PF07688 KaiA C-terminal domain IQE94_13635 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IQE94_13635 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IQE94_13635 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IQE94_13635 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IQE94_13650 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system IQE94_13665 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit IQE94_13680 PF03600 Citrate transporter IQE94_13695 PF00113 Enolase, C-terminal TIM barrel domain IQE94_13695 PF03952 Enolase, N-terminal domain IQE94_13700 PF00515 Tetratricopeptide repeat IQE94_13710 PF00148 Nitrogenase component 1 type Oxidoreductase IQE94_13720 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family IQE94_13730 PF09210 Domain of unknown function (DUF1957) IQE94_13730 PF03065 Glycosyl hydrolase family 57 IQE94_13740 PF00005 ABC transporter IQE94_13740 PF17912 MalK OB fold domain IQE94_13745 PF09506 Glucosylglycerol-phosphate phosphatase (Salt_tol_Pase) IQE94_13750 PF00563 EAL domain IQE94_13750 PF00498 FHA domain IQE94_13750 PF00990 Diguanylate cyclase, GGDEF domain IQE94_13755 PF00330 Aconitase family (aconitate hydratase) IQE94_13765 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family IQE94_13780 PF13460 NAD(P)H-binding IQE94_13790 PF16363 GDP-mannose 4,6 dehydratase IQE94_13795 PF17863 AAA lid domain IQE94_13795 PF07726 ATPase family associated with various cellular activities (AAA) IQE94_13800 PF03796 DnaB-like helicase C terminal domain IQE94_13800 PF00772 DnaB-like helicase N terminal domain IQE94_13800 PF14528 LAGLIDADG-like domain IQE94_13815 PF12911 N-terminal TM domain of oligopeptide transport permease C IQE94_13815 PF00528 Binding-protein-dependent transport system inner membrane component IQE94_13820 PF01740 STAS domain IQE94_13820 PF00916 Sulfate permease family IQE94_13825 PF00990 Diguanylate cyclase, GGDEF domain IQE94_13825 PF01590 GAF domain IQE94_13825 PF00360 Phytochrome region IQE94_13825 PF00563 EAL domain IQE94_13830 PF00842 Alanine racemase, C-terminal domain IQE94_13830 PF01168 Alanine racemase, N-terminal domain IQE94_13840 PF01084 Ribosomal protein S18 IQE94_13845 PF00471 Ribosomal protein L33 IQE94_13850 PF00326 Prolyl oligopeptidase family IQE94_13860 PF01370 NAD dependent epimerase/dehydratase family IQE94_13870 PF12849 PBP superfamily domain IQE94_13885 PF06838 Methionine gamma-lyase IQE94_13900 PF00501 AMP-binding enzyme IQE94_13900 PF13193 AMP-binding enzyme C-terminal domain IQE94_13900 PF16177 Acetyl-coenzyme A synthetase N-terminus IQE94_13905 PF11016 Protein of unknown function (DUF2854) IQE94_13915 PF01593 Flavin containing amine oxidoreductase IQE94_13925 PF12557 Cob(I)alamin adenosyltransferase N terminal IQE94_13925 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP IQE94_13935 PF08486 Stage II sporulation protein IQE94_13940 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit IQE94_13985 PF03793 PASTA domain IQE94_13985 PF00069 Protein kinase domain IQE94_14045 PF01979 Amidohydrolase family IQE94_14090 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IQE94_14095 PF02657 Fe-S metabolism associated domain IQE94_14115 PF00069 Protein kinase domain IQE94_14125 PF13409 Glutathione S-transferase, N-terminal domain IQE94_14145 PF01502 Phosphoribosyl-AMP cyclohydrolase IQE94_14145 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase IQE94_14150 PF07683 Cobalamin synthesis protein cobW C-terminal domain IQE94_14150 PF02492 CobW/HypB/UreG, nucleotide-binding domain IQE94_14160 PF00348 Polyprenyl synthetase IQE94_14165 PF00849 RNA pseudouridylate synthase IQE94_14175 PF05419 GUN4-like IQE94_14175 PF16416 ARM-like repeat domain, GUN4-N terminal IQE94_14180 PF02915 Rubrerythrin IQE94_14185 PF01370 NAD dependent epimerase/dehydratase family IQE94_14190 PF16363 GDP-mannose 4,6 dehydratase IQE94_14205 PF00124 Photosynthetic reaction centre protein IQE94_14210 PF17810 Arginine decarboxylase helical bundle domain IQE94_14210 PF17944 Arginine decarboxylase C-terminal helical extension IQE94_14210 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain IQE94_14215 PF03119 NAD-dependent DNA ligase C4 zinc finger domain IQE94_14215 PF03120 NAD-dependent DNA ligase OB-fold domain IQE94_14215 PF01653 NAD-dependent DNA ligase adenylation domain IQE94_14215 PF00533 BRCA1 C Terminus (BRCT) domain IQE94_14215 PF12826 Helix-hairpin-helix motif IQE94_14225 PF01032 FecCD transport family IQE94_14230 PF01032 FecCD transport family IQE94_14235 PF00005 ABC transporter IQE94_14240 PF01497 Periplasmic binding protein IQE94_14250 PF12833 Helix-turn-helix domain IQE94_14270 PF07715 TonB-dependent Receptor Plug Domain IQE94_14270 PF00593 TonB dependent receptor IQE94_14280 PF13649 Methyltransferase domain IQE94_14290 PF02472 Biopolymer transport protein ExbD/TolR IQE94_14295 PF01618 MotA/TolQ/ExbB proton channel family IQE94_14310 PF00005 ABC transporter IQE94_14310 PF00664 ABC transporter transmembrane region IQE94_14315 PF01497 Periplasmic binding protein IQE94_14325 PF00664 ABC transporter transmembrane region IQE94_14325 PF00005 ABC transporter IQE94_14345 PF03912 Psb28 protein IQE94_14355 PF00486 Transcriptional regulatory protein, C terminal IQE94_14355 PF00072 Response regulator receiver domain IQE94_14355 PF01627 Hpt domain IQE94_14360 PF00427 Phycobilisome Linker polypeptide IQE94_14370 PF13426 PAS domain IQE94_14370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IQE94_14370 PF00672 HAMP domain IQE94_14370 PF00512 His Kinase A (phospho-acceptor) domain IQE94_14385 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase IQE94_14400 PF02469 Fasciclin domain IQE94_14435 PF00924 Mechanosensitive ion channel IQE94_14435 PF12795 Mechanosensitive ion channel porin domain IQE94_14435 PF12794 Mechanosensitive ion channel inner membrane domain 1 IQE94_14440 PF04025 Domain of unknown function (DUF370) IQE94_14445 PF02578 Multi-copper polyphenol oxidoreductase laccase IQE94_14465 PF01476 LysM domain IQE94_14465 PF08525 Opacity-associated protein A N-terminal motif IQE94_14465 PF01551 Peptidase family M23 IQE94_14470 PF00731 AIR carboxylase IQE94_14485 PF12894 Anaphase-promoting complex subunit 4 WD40 domain IQE94_14485 PF00400 WD domain, G-beta repeat IQE94_14495 PF01521 Iron-sulphur cluster biosynthesis IQE94_14500 PF04542 Sigma-70 region 2 IQE94_14500 PF04539 Sigma-70 region 3 IQE94_14500 PF04545 Sigma-70, region 4 IQE94_14505 PF03881 Fructosamine kinase IQE94_14510 PF00462 Glutaredoxin IQE94_14515 PF13393 Histidyl-tRNA synthetase IQE94_14520 PF18317 Shikimate 5'-dehydrogenase C-terminal domain IQE94_14520 PF08501 Shikimate dehydrogenase substrate binding domain IQE94_14520 PF01488 Shikimate / quinate 5-dehydrogenase IQE94_14530 PF01266 FAD dependent oxidoreductase IQE94_14545 PF05163 DinB family IQE94_14560 PF03808 Glycosyl transferase WecB/TagA/CpsF family IQE94_14585 PF03699 Uncharacterised protein family (UPF0182) IQE94_14600 PF01478 Type IV leader peptidase family IQE94_14600 PF06750 Bacterial Peptidase A24 N-terminal domain IQE94_14605 PF00528 Binding-protein-dependent transport system inner membrane component IQE94_14615 PF05173 Dihydrodipicolinate reductase, C-terminus IQE94_14615 PF01113 Dihydrodipicolinate reductase, N-terminus IQE94_14620 PF00085 Thioredoxin IQE94_14635 PF13546 DDE superfamily endonuclease IQE94_14645 PF00586 AIR synthase related protein, N-terminal domain IQE94_14645 PF02769 AIR synthase related protein, C-terminal domain IQE94_14645 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain IQE94_14655 PF00293 NUDIX domain IQE94_14660 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IQE94_14665 PF00625 Guanylate kinase IQE94_14670 PF00300 Histidine phosphatase superfamily (branch 1) IQE94_14675 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase IQE94_14680 PF01925 Sulfite exporter TauE/SafE IQE94_14685 PF03130 PBS lyase HEAT-like repeat IQE94_14700 PF01145 SPFH domain / Band 7 family IQE94_14710 PF10150 Ribonuclease E/G family IQE94_14715 PF01351 Ribonuclease HII IQE94_14720 PF00293 NUDIX domain IQE94_14725 PF01138 3' exoribonuclease family, domain 1 IQE94_14725 PF00575 S1 RNA binding domain IQE94_14725 PF00013 KH domain IQE94_14725 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain IQE94_14725 PF03725 3' exoribonuclease family, domain 2 IQE94_14730 PF10502 Signal peptidase, peptidase S26 IQE94_14735 PF00390 Malic enzyme, N-terminal domain IQE94_14735 PF03949 Malic enzyme, NAD binding domain IQE94_14745 PF00571 CBS domain IQE94_14745 PF00291 Pyridoxal-phosphate dependent enzyme IQE94_14750 PF08544 GHMP kinases C terminal IQE94_14750 PF00288 GHMP kinases N terminal domain IQE94_14755 PF00398 Ribosomal RNA adenine dimethylase IQE94_14770 PF00226 DnaJ domain IQE94_14770 PF01556 DnaJ C terminal domain IQE94_14770 PF00684 DnaJ central domain IQE94_14785 PF11378 Protein of unknown function (DUF3181) IQE94_14800 PF00266 Aminotransferase class-V IQE94_14835 PF02899 Phage integrase, N-terminal SAM-like domain IQE94_14835 PF00589 Phage integrase family IQE94_14845 PF01266 FAD dependent oxidoreductase IQE94_14845 PF05690 Thiazole biosynthesis protein ThiG IQE94_14850 PF00672 HAMP domain IQE94_14850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IQE94_14850 PF00512 His Kinase A (phospho-acceptor) domain IQE94_14850 PF00989 PAS fold IQE94_14855 PF02531 PsaD IQE94_14860 PF04715 Anthranilate synthase component I, N terminal region IQE94_14860 PF00425 chorismate binding enzyme IQE94_14865 PF00348 Polyprenyl synthetase IQE94_14880 PF01895 PhoU domain IQE94_14885 PF02576 RimP N-terminal domain IQE94_14885 PF17384 RimP C-terminal SH3 domain IQE94_14890 PF08529 NusA N-terminal domain IQE94_14890 PF00575 S1 RNA binding domain IQE94_14890 PF13184 NusA-like KH domain IQE94_14900 PF00009 Elongation factor Tu GTP binding domain IQE94_14900 PF11987 Translation-initiation factor 2 IQE94_14900 PF04760 Translation initiation factor IF-2, N-terminal region IQE94_14910 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) IQE94_14910 PF00128 Alpha amylase, catalytic domain IQE94_14920 PF01926 50S ribosome-binding GTPase IQE94_14920 PF06071 Protein of unknown function (DUF933) IQE94_14925 PF01926 50S ribosome-binding GTPase IQE94_14930 PF00421 Photosystem II protein IQE94_14940 PF00258 Flavodoxin IQE94_14950 PF10742 Protein of unknown function (DUF2555) IQE94_14955 PF02441 Flavoprotein IQE94_14955 PF04127 DNA / pantothenate metabolism flavoprotein IQE94_14960 PF12697 Alpha/beta hydrolase family IQE94_14965 PF13089 Polyphosphate kinase N-terminal domain IQE94_14965 PF17941 Polyphosphate kinase C-terminal domain 1 IQE94_14965 PF13090 Polyphosphate kinase C-terminal domain 2 IQE94_14965 PF02503 Polyphosphate kinase middle domain IQE94_14975 PF00588 SpoU rRNA Methylase family IQE94_14985 PF01964 Radical SAM ThiC family IQE94_14990 PF01584 CheW-like domain IQE94_14990 PF00072 Response regulator receiver domain IQE94_14990 PF01627 Hpt domain IQE94_14990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IQE94_14990 PF02895 Signal transducing histidine kinase, homodimeric domain IQE94_14995 PF00672 HAMP domain IQE94_14995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IQE94_14995 PF02743 Cache domain IQE94_15005 PF00072 Response regulator receiver domain IQE94_15010 PF00072 Response regulator receiver domain IQE94_15010 PF14332 Domain of unknown function (DUF4388) IQE94_15015 PF00773 RNB domain IQE94_15025 PF01434 Peptidase family M41 IQE94_15025 PF17862 AAA+ lid domain IQE94_15025 PF00004 ATPase family associated with various cellular activities (AAA) IQE94_15040 PF02421 Ferrous iron transport protein B IQE94_15040 PF07664 Ferrous iron transport protein B C terminus IQE94_15040 PF07670 Nucleoside recognition IQE94_15050 PF03819 MazG nucleotide pyrophosphohydrolase domain IQE94_15060 PF00563 EAL domain IQE94_15060 PF00990 Diguanylate cyclase, GGDEF domain IQE94_15060 PF05231 MASE1 IQE94_15060 PF08447 PAS fold IQE94_15060 PF08448 PAS fold IQE94_15060 PF13426 PAS domain IQE94_15070 PF01472 PUA domain IQE94_15070 PF00696 Amino acid kinase family IQE94_15075 PF01788 PsbJ IQE94_15080 PF02419 PsbL protein IQE94_15085 PF00283 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits IQE94_15090 PF00284 Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit IQE94_15090 PF00283 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits IQE94_15095 PF14870 Photosynthesis system II assembly factor YCF48 IQE94_15100 PF00301 Rubredoxin IQE94_15105 PF02780 Transketolase, C-terminal domain IQE94_15105 PF02779 Transketolase, pyrimidine binding domain IQE94_15105 PF13292 1-deoxy-D-xylulose-5-phosphate synthase IQE94_15120 PF01022 Bacterial regulatory protein, arsR family IQE94_15130 PF00449 Urease alpha-subunit, N-terminal domain IQE94_15130 PF01979 Amidohydrolase family IQE94_15140 PF07992 Pyridine nucleotide-disulphide oxidoreductase IQE94_15140 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IQE94_15140 PF00403 Heavy-metal-associated domain IQE94_15145 PF09335 SNARE associated Golgi protein IQE94_15155 PF08241 Methyltransferase domain IQE94_15160 PF09335 SNARE associated Golgi protein IQE94_15190 PF00391 PEP-utilising enzyme, mobile domain IQE94_15190 PF02896 PEP-utilising enzyme, TIM barrel domain IQE94_15190 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain IQE94_15200 PF12773 Double zinc ribbon IQE94_15200 PF00498 FHA domain IQE94_15205 PF03775 Septum formation inhibitor MinC, C-terminal domain IQE94_15210 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain IQE94_15215 PF03776 Septum formation topological specificity factor MinE IQE94_15230 PF07963 Prokaryotic N-terminal methylation motif IQE94_15230 PF08334 Type II secretion system (T2SS), protein G IQE94_15255 PF01555 DNA methylase IQE94_15265 PF00654 Voltage gated chloride channel IQE94_15280 PF03186 CobD/Cbib protein IQE94_15285 PF00144 Beta-lactamase IQE94_15290 PF04432 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus IQE94_15290 PF04422 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term IQE94_15295 PF01266 FAD dependent oxidoreductase IQE94_15295 PF05690 Thiazole biosynthesis protein ThiG IQE94_15300 PF17864 RuvB AAA lid domain IQE94_15300 PF05491 RuvB C-terminal winged helix domain IQE94_15300 PF05496 Holliday junction DNA helicase RuvB P-loop domain IQE94_15310 PF07517 SecA DEAD-like domain IQE94_15310 PF01043 SecA preprotein cross-linking domain IQE94_15310 PF07516 SecA Wing and Scaffold domain IQE94_15325 PF04012 PspA/IM30 family IQE94_15330 PF00253 Ribosomal protein S14p/S29e IQE94_15345 PF12849 PBP superfamily domain IQE94_15350 PF12849 PBP superfamily domain IQE94_15355 PF00528 Binding-protein-dependent transport system inner membrane component IQE94_15360 PF00528 Binding-protein-dependent transport system inner membrane component IQE94_15365 PF00005 ABC transporter IQE94_15370 PF00005 ABC transporter IQE94_15375 PF08534 Redoxin IQE94_15380 PF11412 Disulphide bond corrector protein DsbC IQE94_15380 PF02683 Cytochrome C biogenesis protein transmembrane region IQE94_15385 PF04542 Sigma-70 region 2 IQE94_15385 PF04545 Sigma-70, region 4 IQE94_15395 PF00999 Sodium/hydrogen exchanger family IQE94_15415 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain IQE94_15415 PF01409 tRNA synthetases class II core domain (F) IQE94_15425 PF01648 4'-phosphopantetheinyl transferase superfamily IQE94_15430 PF00742 Homoserine dehydrogenase IQE94_15430 PF03447 Homoserine dehydrogenase, NAD binding domain IQE94_15430 PF01842 ACT domain IQE94_15440 PF01050 Mannose-6-phosphate isomerase IQE94_15440 PF00483 Nucleotidyl transferase IQE94_15445 PF00501 AMP-binding enzyme IQE94_15445 PF13193 AMP-binding enzyme C-terminal domain IQE94_15460 PF03023 Lipid II flippase MurJ IQE94_15470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IQE94_15470 PF13426 PAS domain IQE94_15470 PF00512 His Kinase A (phospho-acceptor) domain IQE94_15470 PF00672 HAMP domain IQE94_15475 PF14159 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase IQE94_15475 PF00133 tRNA synthetases class I (I, L, M and V) IQE94_15475 PF10458 Valyl tRNA synthetase tRNA binding arm IQE94_15475 PF08264 Anticodon-binding domain of tRNA IQE94_15485 PF17862 AAA+ lid domain IQE94_15485 PF00004 ATPase family associated with various cellular activities (AAA) IQE94_15485 PF01434 Peptidase family M41 IQE94_15495 PF00551 Formyl transferase IQE94_15500 PF06596 Photosystem II reaction centre X protein (PsbX) IQE94_15510 PF12344 Ultra-violet resistance protein B IQE94_15510 PF17757 UvrB interaction domain IQE94_15510 PF00271 Helicase conserved C-terminal domain IQE94_15510 PF04851 Type III restriction enzyme, res subunit IQE94_15510 PF02151 UvrB/uvrC motif IQE94_15525 PF09827 CRISPR associated protein Cas2 IQE94_15530 PF01867 CRISPR associated protein Cas1 IQE94_15530 PF01930 Domain of unknown function DUF83 IQE94_15555 PF01905 CRISPR-associated negative auto-regulator DevR/Csa2 IQE94_15565 PF18019 HD domain IQE94_15580 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) IQE94_15590 PF00005 ABC transporter IQE94_15600 PF00892 EamA-like transporter family IQE94_15605 PF01521 Iron-sulphur cluster biosynthesis IQE94_15610 PF17863 AAA lid domain IQE94_15610 PF07726 ATPase family associated with various cellular activities (AAA) IQE94_15620 PF07689 KaiB domain IQE94_15620 PF00512 His Kinase A (phospho-acceptor) domain IQE94_15620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IQE94_15630 PF12966 N-ATPase, AtpR subunit IQE94_15635 PF00119 ATP synthase A chain IQE94_15640 PF00137 ATP synthase subunit C IQE94_15645 PF00430 ATP synthase B/B' CF(0) IQE94_15650 PF00430 ATP synthase B/B' CF(0) IQE94_15660 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IQE94_15660 PF02874 ATP synthase alpha/beta family, beta-barrel domain IQE94_15660 PF00306 ATP synthase alpha/beta chain, C terminal domain IQE94_15665 PF00231 ATP synthase IQE94_15680 PF01969 Protein of unknown function DUF111 IQE94_15685 PF01300 Telomere recombination IQE94_15690 PF00595 PDZ domain IQE94_15690 PF03572 Peptidase family S41 IQE94_15700 PF01613 Flavin reductase like domain IQE94_15700 PF00753 Metallo-beta-lactamase superfamily IQE94_15710 PF01613 Flavin reductase like domain IQE94_15710 PF00258 Flavodoxin IQE94_15715 PF00801 PKD domain IQE94_15715 PF05547 Immune inhibitor A peptidase M6 IQE94_15720 PF01380 SIS domain IQE94_15725 PF00578 AhpC/TSA family IQE94_15735 PF03742 PetN IQE94_15745 PF00149 Calcineurin-like phosphoesterase IQE94_15755 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system IQE94_15775 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system IQE94_15785 PF00092 von Willebrand factor type A domain IQE94_15790 PF00361 Proton-conducting membrane transporter IQE94_15795 PF01241 Photosystem I psaG / psaK IQE94_15800 PF02571 Precorrin-6x reductase CbiJ/CobK IQE94_15805 PF00005 ABC transporter IQE94_15835 PF02392 Ycf4 IQE94_15840 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IQE94_15845 PF00491 Arginase family IQE94_15850 PF00850 Histone deacetylase domain IQE94_15855 PF05151 Photosystem II reaction centre M protein (PsbM) IQE94_15860 PF00582 Universal stress protein family IQE94_15865 PF01910 Thiamine-binding protein IQE94_15875 PF00578 AhpC/TSA family IQE94_15880 PF01435 Peptidase family M48 IQE94_15885 PF03965 Penicillinase repressor IQE94_15895 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IQE94_15905 PF00535 Glycosyl transferase family 2 IQE94_15905 PF13181 Tetratricopeptide repeat IQE94_15920 PF02350 UDP-N-acetylglucosamine 2-epimerase IQE94_15935 PF00085 Thioredoxin IQE94_15945 PF00224 Pyruvate kinase, barrel domain IQE94_15945 PF02887 Pyruvate kinase, alpha/beta domain IQE94_15975 PF00953 Glycosyl transferase family 4 IQE94_15980 PF00072 Response regulator receiver domain IQE94_15980 PF00486 Transcriptional regulatory protein, C terminal IQE94_15985 PF00815 Histidinol dehydrogenase IQE94_15990 PF01699 Sodium/calcium exchanger protein IQE94_16000 PF01189 16S rRNA methyltransferase RsmB/F IQE94_16000 PF01029 NusB family IQE94_16005 PF02472 Biopolymer transport protein ExbD/TolR IQE94_16010 PF01618 MotA/TolQ/ExbB proton channel family IQE94_16020 PF02872 5'-nucleotidase, C-terminal domain IQE94_16020 PF00149 Calcineurin-like phosphoesterase IQE94_16030 PF07689 KaiB domain IQE94_16030 PF00512 His Kinase A (phospho-acceptor) domain IQE94_16030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IQE94_16045 PF00753 Metallo-beta-lactamase superfamily IQE94_16045 PF16123 Hydroxyacylglutathione hydrolase C-terminus IQE94_16055 PF01926 50S ribosome-binding GTPase IQE94_16055 PF01018 GTP1/OBG IQE94_16065 PF00535 Glycosyl transferase family 2 IQE94_16080 PF03741 Integral membrane protein TerC family IQE94_16085 PF08442 ATP-grasp domain IQE94_16085 PF00549 CoA-ligase IQE94_16090 PF01062 Bestrophin, RFP-TM, chloride channel IQE94_16115 PF00132 Bacterial transferase hexapeptide (six repeats) IQE94_16130 PF00534 Glycosyl transferases group 1 IQE94_16135 PF01850 PIN domain IQE94_16140 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin IQE94_16145 PF00534 Glycosyl transferases group 1 IQE94_16145 PF13439 Glycosyltransferase Family 4 IQE94_16155 PF00534 Glycosyl transferases group 1 IQE94_16155 PF13439 Glycosyltransferase Family 4 IQE94_16160 PF05050 Methyltransferase FkbM domain IQE94_16180 PF13439 Glycosyltransferase Family 4 IQE94_16195 PF08241 Methyltransferase domain IQE94_16215 PF00534 Glycosyl transferases group 1 IQE94_16235 PF00535 Glycosyl transferase family 2 IQE94_16250 PF00132 Bacterial transferase hexapeptide (six repeats) IQE94_16260 PF03102 NeuB family IQE94_16260 PF08666 SAF domain IQE94_16285 PF02348 Cytidylyltransferase IQE94_16295 PF14524 Wzt C-terminal domain IQE94_16295 PF00005 ABC transporter IQE94_16320 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system IQE94_16380 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system IQE94_16440 PF05198 Translation initiation factor IF-3, N-terminal domain IQE94_16440 PF00707 Translation initiation factor IF-3, C-terminal domain IQE94_16445 PF05685 Putative restriction endonuclease IQE94_16450 PF01207 Dihydrouridine synthase (Dus) IQE94_16455 PF02773 S-adenosylmethionine synthetase, C-terminal domain IQE94_16455 PF00438 S-adenosylmethionine synthetase, N-terminal domain IQE94_16455 PF02772 S-adenosylmethionine synthetase, central domain IQE94_16460 PF00502 Phycobilisome protein IQE94_16475 PF03773 Predicted permease IQE94_16480 PF00312 Ribosomal protein S15 IQE94_16490 PF00793 DAHP synthetase I family IQE94_16490 PF18152 DAHP synthase ferredoxin-like domain IQE94_16500 PF01077 Nitrite and sulphite reductase 4Fe-4S domain IQE94_16500 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IQE94_16510 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase IQE94_16520 PF02492 CobW/HypB/UreG, nucleotide-binding domain IQE94_16520 PF07683 Cobalamin synthesis protein cobW C-terminal domain IQE94_16535 PF00155 Aminotransferase class I and II IQE94_16550 PF00290 Tryptophan synthase alpha chain IQE94_16555 PF00712 DNA polymerase III beta subunit, N-terminal domain IQE94_16555 PF02767 DNA polymerase III beta subunit, central domain IQE94_16555 PF02768 DNA polymerase III beta subunit, C-terminal domain IQE94_16560 PF03239 Iron permease FTR1 family IQE94_16565 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain IQE94_16565 PF01077 Nitrite and sulphite reductase 4Fe-4S domain IQE94_16580 PF00156 Phosphoribosyl transferase domain IQE94_16590 PF07690 Major Facilitator Superfamily IQE94_16595 PF12849 PBP superfamily domain IQE94_16600 PF00528 Binding-protein-dependent transport system inner membrane component IQE94_16605 PF00528 Binding-protein-dependent transport system inner membrane component IQE94_16610 PF00005 ABC transporter IQE94_16640 PF02565 Recombination protein O C terminal IQE94_16640 PF11967 Recombination protein O N terminal IQE94_16645 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IQE94_16645 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IQE94_16645 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IQE94_16645 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IQE94_16660 PF00266 Aminotransferase class-V IQE94_16665 PF03704 Bacterial transcriptional activator domain IQE94_16665 PF00486 Transcriptional regulatory protein, C terminal IQE94_16665 PF00498 FHA domain IQE94_16680 PF00483 Nucleotidyl transferase IQE94_16685 PF02629 CoA binding domain IQE94_16685 PF00549 CoA-ligase IQE94_16690 PF01070 FMN-dependent dehydrogenase IQE94_16695 PF00486 Transcriptional regulatory protein, C terminal IQE94_16695 PF00072 Response regulator receiver domain IQE94_16705 PF02427 Photosystem I reaction centre subunit IV / PsaE IQE94_16710 PF06827 Zinc finger found in FPG and IleRS IQE94_16710 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain IQE94_16710 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain IQE94_16720 PF02540 NAD synthase IQE94_16720 PF00795 Carbon-nitrogen hydrolase IQE94_16725 PF00563 EAL domain IQE94_16725 PF00990 Diguanylate cyclase, GGDEF domain IQE94_16725 PF00360 Phytochrome region IQE94_16725 PF01590 GAF domain IQE94_16730 PF14332 Domain of unknown function (DUF4388) IQE94_16730 PF00072 Response regulator receiver domain IQE94_16740 PF03483 B3/4 domain IQE94_16740 PF03484 tRNA synthetase B5 domain IQE94_16740 PF03147 Ferredoxin-fold anticodon binding domain IQE94_16740 PF01588 Putative tRNA binding domain IQE94_16740 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain IQE94_16745 PF00805 Pentapeptide repeats (8 copies) IQE94_16745 PF00069 Protein kinase domain IQE94_16750 PF00196 Bacterial regulatory proteins, luxR family IQE94_16750 PF00072 Response regulator receiver domain IQE94_16755 PF00311 Phosphoenolpyruvate carboxylase IQE94_16780 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain IQE94_16780 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain IQE94_16790 PF08245 Mur ligase middle domain IQE94_16790 PF08353 Domain of unknown function (DUF1727) IQE94_16795 PF02570 Precorrin-8X methylmutase IQE94_16800 PF05193 Peptidase M16 inactive domain IQE94_16800 PF00675 Insulinase (Peptidase family M16) IQE94_16805 PF01593 Flavin containing amine oxidoreductase IQE94_16820 PF06745 KaiC IQE94_16825 PF07689 KaiB domain IQE94_16830 PF00679 Elongation factor G C-terminus IQE94_16830 PF00009 Elongation factor Tu GTP binding domain IQE94_16830 PF03144 Elongation factor Tu domain 2 IQE94_16830 PF06421 GTP-binding protein LepA C-terminus IQE94_16835 PF02811 PHP domain IQE94_16835 PF07733 Bacterial DNA polymerase III alpha NTPase domain IQE94_16835 PF17657 Bacterial DNA polymerase III alpha subunit finger domain IQE94_16835 PF14579 Helix-hairpin-helix motif IQE94_16835 PF01336 OB-fold nucleic acid binding domain IQE94_16850 PF01494 FAD binding domain IQE94_16855 PF00069 Protein kinase domain IQE94_16875 PF01808 AICARFT/IMPCHase bienzyme IQE94_16875 PF02142 MGS-like domain IQE94_16880 PF02633 Creatinine amidohydrolase IQE94_16885 PF01475 Ferric uptake regulator family IQE94_16890 PF00005 ABC transporter IQE94_16890 PF02687 FtsX-like permease family IQE94_16890 PF12704 MacB-like periplasmic core domain IQE94_16895 PF00154 recA bacterial DNA recombination protein IQE94_16900 PF00027 Cyclic nucleotide-binding domain IQE94_16900 PF07885 Ion channel IQE94_16915 PF00696 Amino acid kinase family IQE94_16920 PF00268 Ribonucleotide reductase, small chain IQE94_16935 PF01061 ABC-2 type transporter IQE94_16940 PF00005 ABC transporter IQE94_16940 PF14524 Wzt C-terminal domain IQE94_16945 PF01370 NAD dependent epimerase/dehydratase family IQE94_16955 PF01734 Patatin-like phospholipase IQE94_16975 PF00805 Pentapeptide repeats (8 copies) IQE94_16980 PF02222 ATP-grasp domain IQE94_16980 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain IQE94_16995 PF00764 Arginosuccinate synthase IQE94_17010 PF08240 Alcohol dehydrogenase GroES-like domain IQE94_17010 PF00107 Zinc-binding dehydrogenase IQE94_17030 PF04012 PspA/IM30 family IQE94_17040 PF03707 Bacterial signalling protein N terminal repeat IQE94_17040 PF00990 Diguanylate cyclase, GGDEF domain IQE94_17040 PF00563 EAL domain IQE94_17055 PF13426 PAS domain IQE94_17055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IQE94_17055 PF00672 HAMP domain IQE94_17055 PF00512 His Kinase A (phospho-acceptor) domain IQE94_17065 PF00355 Rieske [2Fe-2S] domain IQE94_17070 PF13546 DDE superfamily endonuclease IQE94_17100 PF01975 Survival protein SurE IQE94_17110 PF03462 PCRF domain IQE94_17110 PF00472 RF-1 domain IQE94_17115 PF03702 Anhydro-N-acetylmuramic acid kinase IQE94_17130 PF00483 Nucleotidyl transferase IQE94_17135 PF00183 Hsp90 protein IQE94_17140 PF00679 Elongation factor G C-terminus IQE94_17140 PF14492 Elongation Factor G, domain II IQE94_17140 PF03764 Elongation factor G, domain IV IQE94_17140 PF00009 Elongation factor Tu GTP binding domain IQE94_17145 PF02769 AIR synthase related protein, C-terminal domain IQE94_17145 PF00586 AIR synthase related protein, N-terminal domain IQE94_17150 PF08241 Methyltransferase domain IQE94_17155 PF00762 Ferrochelatase IQE94_17160 PF01425 Amidase IQE94_17180 PF01590 GAF domain IQE94_17180 PF00563 EAL domain IQE94_17180 PF00990 Diguanylate cyclase, GGDEF domain IQE94_17180 PF00360 Phytochrome region IQE94_17195 PF01420 Type I restriction modification DNA specificity domain IQE94_17225 PF12161 HsdM N-terminal domain IQE94_17225 PF02384 N-6 DNA Methylase IQE94_17240 PF08463 EcoEI R protein C-terminal IQE94_17240 PF00271 Helicase conserved C-terminal domain IQE94_17240 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) IQE94_17240 PF04851 Type III restriction enzyme, res subunit IQE94_17245 PF01743 Poly A polymerase head domain IQE94_17245 PF12627 Probable RNA and SrmB- binding site of polymerase A IQE94_17245 PF13735 tRNA nucleotidyltransferase domain 2 putative IQE94_17255 PF00361 Proton-conducting membrane transporter IQE94_17255 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus IQE94_17255 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus IQE94_17270 PF13085 2Fe-2S iron-sulfur cluster binding domain IQE94_17280 PF02082 Transcriptional regulator IQE94_17285 PF00990 Diguanylate cyclase, GGDEF domain IQE94_17285 PF01590 GAF domain IQE94_17285 PF00563 EAL domain IQE94_17285 PF00360 Phytochrome region IQE94_17290 PF01467 Cytidylyltransferase-like IQE94_17300 PF02527 rRNA small subunit methyltransferase G IQE94_17305 PF01627 Hpt domain IQE94_17305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IQE94_17305 PF02895 Signal transducing histidine kinase, homodimeric domain IQE94_17305 PF01584 CheW-like domain IQE94_17315 PF01458 Uncharacterized protein family (UPF0051) IQE94_17320 PF00005 ABC transporter IQE94_17325 PF01458 Uncharacterized protein family (UPF0051) IQE94_17330 PF00266 Aminotransferase class-V IQE94_17335 PF17886 HSP20-like domain found in ArsA IQE94_17335 PF02374 Anion-transporting ATPase IQE94_17350 PF13580 SIS domain IQE94_17355 PF01242 6-pyruvoyl tetrahydropterin synthase IQE94_17360 PF00437 Type II/IV secretion system protein IQE94_17370 PF00075 RNase H IQE94_17375 PF00072 Response regulator receiver domain IQE94_17375 PF00486 Transcriptional regulatory protein, C terminal IQE94_17380 PF04055 Radical SAM superfamily IQE94_17380 PF00919 Uncharacterized protein family UPF0004 IQE94_17380 PF18693 TRAM domain IQE94_17385 PF00271 Helicase conserved C-terminal domain IQE94_17385 PF00270 DEAD/DEAH box helicase IQE94_17390 PF02774 Semialdehyde dehydrogenase, dimerisation domain IQE94_17390 PF01118 Semialdehyde dehydrogenase, NAD binding domain IQE94_17395 PF00117 Glutamine amidotransferase class-I IQE94_17400 PF03129 Anticodon binding domain IQE94_17400 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IQE94_17400 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IQE94_17405 PF00012 Hsp70 protein IQE94_17410 PF01593 Flavin containing amine oxidoreductase IQE94_17415 PF08241 Methyltransferase domain IQE94_17420 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IQE94_17425 PF00171 Aldehyde dehydrogenase family IQE94_17430 PF00535 Glycosyl transferase family 2 IQE94_17435 PF01556 DnaJ C terminal domain IQE94_17435 PF00226 DnaJ domain IQE94_17440 PF01596 O-methyltransferase IQE94_17445 PF01740 STAS domain IQE94_17445 PF00916 Sulfate permease family IQE94_17455 PF00005 ABC transporter IQE94_17460 PF00475 Imidazoleglycerol-phosphate dehydratase IQE94_17470 PF13847 Methyltransferase domain IQE94_17475 PF07689 KaiB domain IQE94_17480 PF00196 Bacterial regulatory proteins, luxR family IQE94_17480 PF00072 Response regulator receiver domain IQE94_17485 PF12704 MacB-like periplasmic core domain IQE94_17485 PF00005 ABC transporter IQE94_17485 PF02687 FtsX-like permease family IQE94_17490 PF07683 Cobalamin synthesis protein cobW C-terminal domain IQE94_17490 PF02492 CobW/HypB/UreG, nucleotide-binding domain IQE94_17495 PF07444 Ycf66 protein N-terminus IQE94_17505 PF00106 short chain dehydrogenase IQE94_17520 PF00155 Aminotransferase class I and II IQE94_17525 PF09335 SNARE associated Golgi protein IQE94_17530 PF12795 Mechanosensitive ion channel porin domain IQE94_17530 PF12794 Mechanosensitive ion channel inner membrane domain 1 IQE94_17530 PF00924 Mechanosensitive ion channel IQE94_17535 PF00171 Aldehyde dehydrogenase family IQE94_17550 PF00005 ABC transporter IQE94_17555 PF01165 Ribosomal protein S21 IQE94_17610 PF00155 Aminotransferase class I and II IQE94_17610 PF00392 Bacterial regulatory proteins, gntR family IQE94_17640 PF01872 RibD C-terminal domain IQE94_17645 PF07885 Ion channel IQE94_17645 PF17655 Inward rectifier potassium channel C-terminal domain IQE94_17840 PF01867 CRISPR associated protein Cas1 IQE94_17840 PF01930 Domain of unknown function DUF83 IQE94_17845 PF09827 CRISPR associated protein Cas2 IQE94_17870 PF13546 DDE superfamily endonuclease IQE94_17890 PF00873 AcrB/AcrD/AcrF family IQE94_17910 PF01047 MarR family IQE94_17915 PF08361 MAATS-type transcriptional repressor, C-terminal region IQE94_17915 PF00440 Bacterial regulatory proteins, tetR family IQE94_17940 PF01202 Shikimate kinase IQE94_17945 PF13411 MerR HTH family regulatory protein IQE94_17950 PF00106 short chain dehydrogenase IQE94_17955 PF00067 Cytochrome P450 IQE94_17970 PF00561 alpha/beta hydrolase fold IQE94_17970 PF00364 Biotin-requiring enzyme IQE94_17985 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IQE94_18000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IQE94_18000 PF07730 Histidine kinase IQE94_18005 PF00196 Bacterial regulatory proteins, luxR family IQE94_18005 PF00072 Response regulator receiver domain IQE94_18020 PF02899 Phage integrase, N-terminal SAM-like domain IQE94_18020 PF00589 Phage integrase family IQE94_18030 PF01850 PIN domain IQE94_18085 PF00082 Subtilase family IQE94_18090 PF00004 ATPase family associated with various cellular activities (AAA) IQE94_18110 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IQE94_18110 PF00205 Thiamine pyrophosphate enzyme, central domain IQE94_18110 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IQE94_18140 PF01872 RibD C-terminal domain IQE94_18160 PF07690 Major Facilitator Superfamily IQE94_18165 PF00067 Cytochrome P450 IQE94_18185 PF00145 C-5 cytosine-specific DNA methylase IQE94_18200 PF13460 NAD(P)H-binding IQE94_18260 PF00188 Cysteine-rich secretory protein family IQE94_18265 PF08378 Nuclease-related domain IQE94_18270 PF02899 Phage integrase, N-terminal SAM-like domain IQE94_18270 PF00589 Phage integrase family