locus-tag class description KAR29_00005 PF00308 Bacterial dnaA protein KAR29_00005 PF08299 Bacterial dnaA protein helix-turn-helix KAR29_00005 PF11638 DnaA N-terminal domain KAR29_00015 PF02463 RecF/RecN/SMC N terminal domain KAR29_00020 PF01134 Glucose inhibited division protein A KAR29_00020 PF13932 GidA associated domain KAR29_00035 PF16868 NMT1-like family KAR29_00065 PF01880 Desulfoferrodoxin KAR29_00080 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KAR29_00095 PF10369 Small subunit of acetolactate synthase KAR29_00100 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KAR29_00100 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KAR29_00105 PF00682 HMGL-like KAR29_00105 PF08502 LeuA allosteric (dimerisation) domain KAR29_00110 PF00205 Thiamine pyrophosphate enzyme, central domain KAR29_00110 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KAR29_00110 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KAR29_00120 PF02743 Cache domain KAR29_00120 PF00672 HAMP domain KAR29_00120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAR29_00125 PF01541 GIY-YIG catalytic domain KAR29_00130 PF13520 Amino acid permease KAR29_00135 PF00330 Aconitase family (aconitate hydratase) KAR29_00135 PF00694 Aconitase C-terminal domain KAR29_00140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAR29_00140 PF03466 LysR substrate binding domain KAR29_00150 PF13091 PLD-like domain KAR29_00150 PF13396 Phospholipase_D-nuclease N-terminal KAR29_00170 PF00465 Iron-containing alcohol dehydrogenase KAR29_00180 PF01546 Peptidase family M20/M25/M40 KAR29_00180 PF07687 Peptidase dimerisation domain KAR29_00185 PF00672 HAMP domain KAR29_00185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAR29_00185 PF02203 Tar ligand binding domain homologue KAR29_00195 PF04055 Radical SAM superfamily KAR29_00195 PF06968 Biotin and Thiamin Synthesis associated domain KAR29_00210 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit KAR29_00210 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region KAR29_00210 PF00037 4Fe-4S binding domain KAR29_00215 PF02906 Iron only hydrogenase large subunit, C-terminal domain KAR29_00215 PF02256 Iron hydrogenase small subunit KAR29_00215 PF00037 4Fe-4S binding domain KAR29_00215 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KAR29_00230 PF00528 Binding-protein-dependent transport system inner membrane component KAR29_00235 PF00005 ABC transporter KAR29_00245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAR29_00245 PF00672 HAMP domain KAR29_00245 PF02743 Cache domain KAR29_00260 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit KAR29_00260 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region KAR29_00260 PF00037 4Fe-4S binding domain KAR29_00270 PF01226 Formate/nitrite transporter KAR29_00275 PF12804 MobA-like NTP transferase domain KAR29_00280 PF02743 Cache domain KAR29_00280 PF00672 HAMP domain KAR29_00280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAR29_00290 PF02634 FdhD/NarQ family KAR29_00295 PF13185 GAF domain KAR29_00295 PF00990 Diguanylate cyclase, GGDEF domain KAR29_00295 PF00563 EAL domain KAR29_00315 PF00072 Response regulator receiver domain KAR29_00320 PF02654 Cobalamin-5-phosphate synthase KAR29_00325 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase KAR29_00330 PF00291 Pyridoxal-phosphate dependent enzyme KAR29_00340 PF02540 NAD synthase KAR29_00350 PF00171 Aldehyde dehydrogenase family KAR29_00355 PF05901 Excalibur calcium-binding domain KAR29_00355 PF00565 Staphylococcal nuclease homologue KAR29_00370 PF02527 rRNA small subunit methyltransferase G KAR29_00375 PF13614 AAA domain KAR29_00380 PF02195 ParB-like nuclease domain KAR29_00380 PF17762 HTH domain found in ParB protein KAR29_00390 PF01230 HIT domain KAR29_00395 PF09186 Domain of unknown function (DUF1949) KAR29_00395 PF01205 Uncharacterized protein family UPF0029 KAR29_00400 PF01293 Phosphoenolpyruvate carboxykinase KAR29_00405 PF02632 BioY family KAR29_00420 PF08443 RimK-like ATP-grasp domain KAR29_00425 PF01118 Semialdehyde dehydrogenase, NAD binding domain KAR29_00425 PF02774 Semialdehyde dehydrogenase, dimerisation domain KAR29_00430 PF00696 Amino acid kinase family KAR29_00435 PF00202 Aminotransferase class-III KAR29_00440 PF01546 Peptidase family M20/M25/M40 KAR29_00445 PF02687 FtsX-like permease family KAR29_00445 PF00005 ABC transporter KAR29_00445 PF12704 MacB-like periplasmic core domain KAR29_00450 PF00005 ABC transporter KAR29_00450 PF02687 FtsX-like permease family KAR29_00450 PF12704 MacB-like periplasmic core domain KAR29_00455 PF13533 Biotin-lipoyl like KAR29_00465 PF00072 Response regulator receiver domain KAR29_00465 PF00486 Transcriptional regulatory protein, C terminal KAR29_00470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAR29_00470 PF00512 His Kinase A (phospho-acceptor) domain KAR29_00470 PF16527 Two-component sensor protein CpxA, periplasmic domain KAR29_00470 PF00672 HAMP domain KAR29_00485 PF02386 Cation transport protein KAR29_00500 PF00158 Sigma-54 interaction domain KAR29_00500 PF02954 Bacterial regulatory protein, Fis family KAR29_00500 PF00072 Response regulator receiver domain KAR29_00505 PF00512 His Kinase A (phospho-acceptor) domain KAR29_00505 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB KAR29_00505 PF08448 PAS fold KAR29_00505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAR29_00505 PF00672 HAMP domain KAR29_00510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAR29_00510 PF13492 GAF domain KAR29_00510 PF13493 Domain of unknown function (DUF4118) KAR29_00510 PF00512 His Kinase A (phospho-acceptor) domain KAR29_00510 PF02702 Osmosensitive K+ channel His kinase sensor domain KAR29_00515 PF00072 Response regulator receiver domain KAR29_00515 PF00486 Transcriptional regulatory protein, C terminal KAR29_00540 PF01451 Low molecular weight phosphotyrosine protein phosphatase KAR29_00545 PF13847 Methyltransferase domain KAR29_00565 PF00005 ABC transporter KAR29_00565 PF00664 ABC transporter transmembrane region KAR29_00570 PF00440 Bacterial regulatory proteins, tetR family KAR29_00575 PF00266 Aminotransferase class-V KAR29_00580 PF01022 Bacterial regulatory protein, arsR family KAR29_00585 PF02743 Cache domain KAR29_00585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAR29_00585 PF00672 HAMP domain KAR29_00600 PF10431 C-terminal, D2-small domain, of ClpB protein KAR29_00600 PF02861 Clp amino terminal domain, pathogenicity island component KAR29_00600 PF07724 AAA domain (Cdc48 subfamily) KAR29_00600 PF00004 ATPase family associated with various cellular activities (AAA) KAR29_00600 PF17871 AAA lid domain KAR29_00610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAR29_00610 PF00672 HAMP domain KAR29_00620 PF17676 LD-carboxypeptidase C-terminal domain KAR29_00620 PF02016 LD-carboxypeptidase N-terminal domain KAR29_00625 PF00005 ABC transporter KAR29_00625 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KAR29_00630 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KAR29_00630 PF00005 ABC transporter KAR29_00635 PF00528 Binding-protein-dependent transport system inner membrane component KAR29_00635 PF12911 N-terminal TM domain of oligopeptide transport permease C KAR29_00640 PF00528 Binding-protein-dependent transport system inner membrane component KAR29_00645 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KAR29_00650 PF01244 Membrane dipeptidase (Peptidase family M19) KAR29_00655 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain KAR29_00655 PF01118 Semialdehyde dehydrogenase, NAD binding domain KAR29_00660 PF03313 Serine dehydratase alpha chain KAR29_00665 PF00391 PEP-utilising enzyme, mobile domain KAR29_00665 PF02896 PEP-utilising enzyme, TIM barrel domain KAR29_00665 PF05524 PEP-utilising enzyme, N-terminal KAR29_00675 PF00072 Response regulator receiver domain KAR29_00680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAR29_00680 PF00672 HAMP domain KAR29_00680 PF02743 Cache domain KAR29_00685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAR29_00695 PF13426 PAS domain KAR29_00695 PF00563 EAL domain KAR29_00695 PF08447 PAS fold KAR29_00695 PF05231 MASE1 KAR29_00695 PF00990 Diguanylate cyclase, GGDEF domain KAR29_00695 PF08448 PAS fold KAR29_00700 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain KAR29_00700 PF07228 Stage II sporulation protein E (SpoIIE) KAR29_00705 PF09084 NMT1/THI5 like KAR29_00715 PF01740 STAS domain KAR29_00720 PF00933 Glycosyl hydrolase family 3 N terminal domain KAR29_00720 PF01915 Glycosyl hydrolase family 3 C-terminal domain KAR29_00760 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KAR29_00760 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KAR29_00770 PF01895 PhoU domain KAR29_00780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAR29_00780 PF00672 HAMP domain KAR29_00785 PF05598 Transposase domain (DUF772) KAR29_00785 PF01609 Transposase DDE domain KAR29_00805 PF00294 pfkB family carbohydrate kinase KAR29_00810 PF13407 Periplasmic binding protein domain KAR29_00815 PF00005 ABC transporter KAR29_00820 PF07687 Peptidase dimerisation domain KAR29_00820 PF01546 Peptidase family M20/M25/M40 KAR29_00825 PF02653 Branched-chain amino acid transport system / permease component KAR29_00830 PF02653 Branched-chain amino acid transport system / permease component KAR29_00835 PF00356 Bacterial regulatory proteins, lacI family KAR29_00840 PF02608 ABC transporter substrate-binding protein PnrA-like KAR29_00845 PF00005 ABC transporter KAR29_00850 PF02653 Branched-chain amino acid transport system / permease component KAR29_00855 PF02653 Branched-chain amino acid transport system / permease component KAR29_00860 PF01156 Inosine-uridine preferring nucleoside hydrolase KAR29_00865 PF07687 Peptidase dimerisation domain KAR29_00865 PF01546 Peptidase family M20/M25/M40 KAR29_00875 PF07687 Peptidase dimerisation domain KAR29_00875 PF01546 Peptidase family M20/M25/M40 KAR29_00885 PF00005 ABC transporter KAR29_00890 PF00005 ABC transporter KAR29_00895 PF00528 Binding-protein-dependent transport system inner membrane component KAR29_00895 PF12911 N-terminal TM domain of oligopeptide transport permease C KAR29_00900 PF00528 Binding-protein-dependent transport system inner membrane component KAR29_00905 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KAR29_00910 PF07690 Major Facilitator Superfamily KAR29_00920 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KAR29_00925 PF00528 Binding-protein-dependent transport system inner membrane component KAR29_00930 PF12911 N-terminal TM domain of oligopeptide transport permease C KAR29_00930 PF00528 Binding-protein-dependent transport system inner membrane component KAR29_00935 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KAR29_00935 PF00005 ABC transporter KAR29_00940 PF00005 ABC transporter KAR29_00940 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KAR29_00950 PF00877 NlpC/P60 family KAR29_00950 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain KAR29_00955 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KAR29_00955 PF13378 Enolase C-terminal domain-like KAR29_00960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAR29_00960 PF03466 LysR substrate binding domain KAR29_00965 PF00682 HMGL-like KAR29_00970 PF00171 Aldehyde dehydrogenase family KAR29_00970 PF00465 Iron-containing alcohol dehydrogenase KAR29_00985 PF00465 Iron-containing alcohol dehydrogenase KAR29_00995 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KAR29_01000 PF00873 AcrB/AcrD/AcrF family KAR29_01005 PF01047 MarR family KAR29_01015 PF13533 Biotin-lipoyl like KAR29_01020 PF00873 AcrB/AcrD/AcrF family KAR29_01040 PF02311 AraC-like ligand binding domain KAR29_01040 PF12833 Helix-turn-helix domain KAR29_01045 PF05544 Proline racemase KAR29_01055 PF00664 ABC transporter transmembrane region KAR29_01055 PF00005 ABC transporter KAR29_01060 PF00664 ABC transporter transmembrane region KAR29_01060 PF00005 ABC transporter KAR29_01075 PF11849 Domain of unknown function (DUF3369) KAR29_01080 PF10670 Domain of unknown function (DUF4198) KAR29_01095 PF17910 FeoB cytosolic helical domain KAR29_01095 PF04023 FeoA domain KAR29_01095 PF02421 Ferrous iron transport protein B KAR29_01095 PF07664 Ferrous iron transport protein B C terminus KAR29_01095 PF07670 Nucleoside recognition KAR29_01110 PF06445 GyrI-like small molecule binding domain KAR29_01120 PF02558 Ketopantoate reductase PanE/ApbA KAR29_01120 PF08546 Ketopantoate reductase PanE/ApbA C terminal KAR29_01125 PF02548 Ketopantoate hydroxymethyltransferase KAR29_01130 PF02261 Aspartate decarboxylase KAR29_01135 PF02569 Pantoate-beta-alanine ligase KAR29_01150 PF13673 Acetyltransferase (GNAT) domain KAR29_01150 PF04229 GrpB protein KAR29_01155 PF12705 PD-(D/E)XK nuclease superfamily KAR29_01155 PF00580 UvrD/REP helicase N-terminal domain KAR29_01155 PF13361 UvrD-like helicase C-terminal domain KAR29_01190 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain KAR29_01190 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 KAR29_01195 PF01565 FAD binding domain KAR29_01195 PF02913 FAD linked oxidases, C-terminal domain KAR29_01200 PF01012 Electron transfer flavoprotein domain KAR29_01200 PF00766 Electron transfer flavoprotein FAD-binding domain KAR29_01205 PF01012 Electron transfer flavoprotein domain KAR29_01210 PF09861 Lactate racemase N-terminal domain KAR29_01215 PF07729 FCD domain KAR29_01215 PF00392 Bacterial regulatory proteins, gntR family KAR29_01230 PF01867 CRISPR associated protein Cas1 KAR29_01240 PF09704 CRISPR-associated protein (Cas_Cas5) KAR29_01245 PF09344 CT1975-like protein KAR29_01255 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) KAR29_01260 PF18019 HD domain KAR29_01260 PF00271 Helicase conserved C-terminal domain KAR29_01260 PF00270 DEAD/DEAH box helicase KAR29_01265 PF00291 Pyridoxal-phosphate dependent enzyme KAR29_01270 PF01979 Amidohydrolase family KAR29_01275 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAR29_01275 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster KAR29_01280 PF07687 Peptidase dimerisation domain KAR29_01280 PF01546 Peptidase family M20/M25/M40 KAR29_01285 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KAR29_01285 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KAR29_01300 PF02374 Anion-transporting ATPase KAR29_01300 PF17886 HSP20-like domain found in ArsA KAR29_01310 PF00860 Permease family KAR29_01315 PF01979 Amidohydrolase family KAR29_01320 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain KAR29_01320 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase KAR29_01325 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain KAR29_01325 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase KAR29_01330 PF00111 2Fe-2S iron-sulfur cluster binding domain KAR29_01330 PF01799 [2Fe-2S] binding domain KAR29_01340 PF01546 Peptidase family M20/M25/M40 KAR29_01345 PF01235 Sodium:alanine symporter family KAR29_01355 PF01037 Lrp/AsnC ligand binding domain KAR29_01360 PF13847 Methyltransferase domain KAR29_01370 PF01554 MatE KAR29_01375 PF00375 Sodium:dicarboxylate symporter family KAR29_01380 PF00990 Diguanylate cyclase, GGDEF domain KAR29_01380 PF05230 MASE2 domain KAR29_01405 PF05958 tRNA (Uracil-5-)-methyltransferase KAR29_01405 PF01938 TRAM domain KAR29_01410 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KAR29_01415 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KAR29_01415 PF00005 ABC transporter KAR29_01420 PF00005 ABC transporter KAR29_01420 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KAR29_01425 PF12911 N-terminal TM domain of oligopeptide transport permease C KAR29_01425 PF00528 Binding-protein-dependent transport system inner membrane component KAR29_01430 PF00528 Binding-protein-dependent transport system inner membrane component KAR29_01450 PF03180 NLPA lipoprotein KAR29_01475 PF09278 MerR, DNA binding KAR29_01475 PF00376 MerR family regulatory protein KAR29_01490 PF01906 Putative heavy-metal-binding KAR29_01495 PF03180 NLPA lipoprotein KAR29_01500 PF00005 ABC transporter KAR29_01500 PF09383 NIL domain KAR29_01505 PF00528 Binding-protein-dependent transport system inner membrane component KAR29_01515 PF07690 Major Facilitator Superfamily KAR29_01520 PF14535 AMP-binding enzyme C-terminal domain KAR29_01520 PF00501 AMP-binding enzyme KAR29_01530 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 KAR29_01530 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain KAR29_01535 PF01966 HD domain KAR29_01540 PF04960 Glutaminase KAR29_01550 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KAR29_01550 PF00005 ABC transporter KAR29_01555 PF00005 ABC transporter KAR29_01555 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KAR29_01560 PF12911 N-terminal TM domain of oligopeptide transport permease C KAR29_01560 PF00528 Binding-protein-dependent transport system inner membrane component KAR29_01565 PF00528 Binding-protein-dependent transport system inner membrane component KAR29_01570 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KAR29_01575 PF00557 Metallopeptidase family M24 KAR29_01575 PF01321 Creatinase/Prolidase N-terminal domain KAR29_01580 PF03699 Uncharacterised protein family (UPF0182) KAR29_01590 PF01522 Polysaccharide deacetylase KAR29_01600 PF06750 Bacterial Peptidase A24 N-terminal domain KAR29_01600 PF01478 Type IV leader peptidase family KAR29_01605 PF00596 Class II Aldolase and Adducin N-terminal domain KAR29_01610 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KAR29_01615 PF01432 Peptidase family M3 KAR29_01615 PF08439 Oligopeptidase F KAR29_01635 PF07687 Peptidase dimerisation domain KAR29_01635 PF01546 Peptidase family M20/M25/M40 KAR29_01645 PF04961 Formiminotransferase-cyclodeaminase KAR29_01650 PF01979 Amidohydrolase family KAR29_01655 PF07837 Formiminotransferase domain, N-terminal subdomain KAR29_01655 PF02971 Formiminotransferase domain KAR29_01660 PF00300 Histidine phosphatase superfamily (branch 1) KAR29_01665 PF00132 Bacterial transferase hexapeptide (six repeats) KAR29_01665 PF12804 MobA-like NTP transferase domain KAR29_01670 PF13478 XdhC Rossmann domain KAR29_01670 PF02625 XdhC and CoxI family KAR29_01685 PF00005 ABC transporter KAR29_01685 PF08402 TOBE domain KAR29_01690 PF00528 Binding-protein-dependent transport system inner membrane component KAR29_01710 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain KAR29_01710 PF01799 [2Fe-2S] binding domain KAR29_01710 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase KAR29_01710 PF00111 2Fe-2S iron-sulfur cluster binding domain KAR29_01720 PF13456 Reverse transcriptase-like KAR29_01720 PF00300 Histidine phosphatase superfamily (branch 1) KAR29_01730 PF04055 Radical SAM superfamily KAR29_01730 PF13186 Iron-sulfur cluster-binding domain KAR29_01790 PF00072 Response regulator receiver domain KAR29_01795 PF00501 AMP-binding enzyme KAR29_01795 PF14535 AMP-binding enzyme C-terminal domain KAR29_01800 PF03447 Homoserine dehydrogenase, NAD binding domain KAR29_01800 PF00742 Homoserine dehydrogenase KAR29_01800 PF01842 ACT domain KAR29_01805 PF02743 Cache domain KAR29_01805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAR29_01805 PF00672 HAMP domain KAR29_01815 PF00871 Acetokinase family KAR29_01820 PF01515 Phosphate acetyl/butaryl transferase KAR29_01825 PF01515 Phosphate acetyl/butaryl transferase KAR29_01830 PF00871 Acetokinase family KAR29_01835 PF01063 Amino-transferase class IV KAR29_01840 PF03807 NADP oxidoreductase coenzyme F420-dependent KAR29_01840 PF14748 Pyrroline-5-carboxylate reductase dimerisation KAR29_01845 PF00132 Bacterial transferase hexapeptide (six repeats) KAR29_01850 PF00291 Pyridoxal-phosphate dependent enzyme KAR29_01855 PF00403 Heavy-metal-associated domain KAR29_01865 PF01751 Toprim domain KAR29_01865 PF00204 DNA gyrase B KAR29_01865 PF00986 DNA gyrase B subunit, carboxyl terminus KAR29_01865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAR29_01875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAR29_01910 PF00672 HAMP domain KAR29_01910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAR29_01920 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component KAR29_01920 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component KAR29_01925 PF00982 Glycosyltransferase family 20 KAR29_01935 PF07690 Major Facilitator Superfamily KAR29_01940 PF00583 Acetyltransferase (GNAT) family KAR29_01945 PF01820 D-ala D-ala ligase N-terminus KAR29_01945 PF07478 D-ala D-ala ligase C-terminus KAR29_01950 PF07478 D-ala D-ala ligase C-terminus KAR29_01960 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KAR29_01960 PF00005 ABC transporter KAR29_01965 PF00005 ABC transporter KAR29_01965 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KAR29_01970 PF00528 Binding-protein-dependent transport system inner membrane component KAR29_01970 PF12911 N-terminal TM domain of oligopeptide transport permease C KAR29_01975 PF00528 Binding-protein-dependent transport system inner membrane component KAR29_01980 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KAR29_01985 PF07670 Nucleoside recognition KAR29_01990 PF07670 Nucleoside recognition KAR29_01995 PF03749 Sugar fermentation stimulation protein RE domain KAR29_01995 PF17746 SfsA N-terminal OB domain KAR29_02010 PF00005 ABC transporter KAR29_02015 PF00950 ABC 3 transport family KAR29_02020 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KAR29_02030 PF03466 LysR substrate binding domain KAR29_02030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAR29_02035 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KAR29_02040 PF00528 Binding-protein-dependent transport system inner membrane component KAR29_02045 PF00528 Binding-protein-dependent transport system inner membrane component KAR29_02045 PF12911 N-terminal TM domain of oligopeptide transport permease C KAR29_02050 PF00005 ABC transporter KAR29_02050 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KAR29_02055 PF00005 ABC transporter KAR29_02055 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KAR29_02075 PF07690 Major Facilitator Superfamily KAR29_02075 PF00083 Sugar (and other) transporter KAR29_02080 PF01966 HD domain KAR29_02080 PF12627 Probable RNA and SrmB- binding site of polymerase A KAR29_02080 PF01743 Poly A polymerase head domain KAR29_02090 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus KAR29_02090 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus KAR29_02095 PF00005 ABC transporter KAR29_02095 PF02687 FtsX-like permease family KAR29_02095 PF12704 MacB-like periplasmic core domain KAR29_02100 PF00476 DNA polymerase family A KAR29_02100 PF01612 3'-5' exonuclease KAR29_02105 PF03315 Serine dehydratase beta chain KAR29_02105 PF01842 ACT domain KAR29_02110 PF03313 Serine dehydratase alpha chain KAR29_02120 PF00521 DNA gyrase/topoisomerase IV, subunit A KAR29_02120 PF03989 DNA gyrase C-terminal domain, beta-propeller KAR29_02125 PF02666 Phosphatidylserine decarboxylase KAR29_02130 PF01066 CDP-alcohol phosphatidyltransferase KAR29_02135 PF09515 Thiamine transporter protein (Thia_YuaJ) KAR29_02140 PF00753 Metallo-beta-lactamase superfamily KAR29_02140 PF00258 Flavodoxin KAR29_02165 PF00271 Helicase conserved C-terminal domain KAR29_02165 PF00270 DEAD/DEAH box helicase KAR29_02170 PF02080 TrkA-C domain KAR29_02170 PF06826 Predicted Permease Membrane Region KAR29_02175 PF02310 B12 binding domain KAR29_02175 PF01642 Methylmalonyl-CoA mutase KAR29_02180 PF02310 B12 binding domain KAR29_02180 PF01642 Methylmalonyl-CoA mutase KAR29_02190 PF01039 Carboxyl transferase domain KAR29_02205 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit KAR29_02220 PF00390 Malic enzyme, N-terminal domain KAR29_02220 PF03949 Malic enzyme, NAD binding domain KAR29_02245 PF00654 Voltage gated chloride channel KAR29_02255 PF01734 Patatin-like phospholipase KAR29_02260 PF03129 Anticodon binding domain KAR29_02260 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KAR29_02260 PF09180 Prolyl-tRNA synthetase, C-terminal KAR29_02300 PF02146 Sir2 family KAR29_02305 PF00860 Permease family KAR29_02315 PF00578 AhpC/TSA family KAR29_02315 PF10417 C-terminal domain of 1-Cys peroxiredoxin KAR29_02320 PF00210 Ferritin-like domain KAR29_02325 PF01613 Flavin reductase like domain KAR29_02325 PF00301 Rubredoxin KAR29_02355 PF16697 Inner membrane component of T3SS, cytoplasmic domain KAR29_02360 PF00069 Protein kinase domain KAR29_02365 PF00196 Bacterial regulatory proteins, luxR family KAR29_02365 PF00563 EAL domain KAR29_02375 PF02446 4-alpha-glucanotransferase KAR29_02395 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase KAR29_02405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAR29_02405 PF03466 LysR substrate binding domain KAR29_02410 PF01551 Peptidase family M23 KAR29_02410 PF01464 Transglycosylase SLT domain KAR29_02410 PF10145 Phage-related minor tail protein KAR29_02415 PF04073 Aminoacyl-tRNA editing domain KAR29_02415 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KAR29_02415 PF03129 Anticodon binding domain KAR29_02425 PF17763 Glutaminase/Asparaginase C-terminal domain KAR29_02425 PF00710 Asparaginase, N-terminal KAR29_02430 PF02080 TrkA-C domain KAR29_02430 PF02254 TrkA-N domain KAR29_02435 PF02386 Cation transport protein KAR29_02440 PF00072 Response regulator receiver domain KAR29_02440 PF01584 CheW-like domain KAR29_02465 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system KAR29_02465 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system KAR29_02480 PF00196 Bacterial regulatory proteins, luxR family KAR29_02480 PF00072 Response regulator receiver domain KAR29_02485 PF07730 Histidine kinase KAR29_02485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAR29_02490 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KAR29_02490 PF00753 Metallo-beta-lactamase superfamily KAR29_02490 PF10996 Beta-Casp domain KAR29_02500 PF00579 tRNA synthetases class I (W and Y) KAR29_02505 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAR29_02505 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KAR29_02520 PF03279 Bacterial lipid A biosynthesis acyltransferase KAR29_02525 PF01361 Tautomerase enzyme KAR29_02535 PF04309 Glycerol-3-phosphate responsive antiterminator KAR29_02540 PF00230 Major intrinsic protein KAR29_02545 PF02733 Dak1 domain KAR29_02550 PF02734 DAK2 domain KAR29_02555 PF03610 PTS system fructose IIA component KAR29_02555 PF05524 PEP-utilising enzyme, N-terminal KAR29_02555 PF00391 PEP-utilising enzyme, mobile domain KAR29_02555 PF00381 PTS HPr component phosphorylation site KAR29_02560 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KAR29_02560 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KAR29_02565 PF01266 FAD dependent oxidoreductase KAR29_02570 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAR29_02570 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster KAR29_02580 PF00381 PTS HPr component phosphorylation site KAR29_02585 PF00202 Aminotransferase class-III KAR29_02615 PF01791 DeoC/LacD family aldolase KAR29_02625 PF01584 CheW-like domain KAR29_02630 PF02811 PHP domain KAR29_02635 PF01212 Beta-eliminating lyase KAR29_02640 PF01523 Putative modulator of DNA gyrase KAR29_02645 PF01520 N-acetylmuramoyl-L-alanine amidase KAR29_02645 PF11741 AMIN domain KAR29_02655 PF03725 3' exoribonuclease family, domain 2 KAR29_02655 PF01138 3' exoribonuclease family, domain 1 KAR29_02660 PF01725 Ham1 family KAR29_02670 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KAR29_02670 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain KAR29_02675 PF00572 Ribosomal protein L13 KAR29_02680 PF00380 Ribosomal protein S9/S16 KAR29_02690 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KAR29_02690 PF17203 Single cache domain 3 KAR29_02690 PF00989 PAS fold KAR29_02690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAR29_02695 PF00072 Response regulator receiver domain KAR29_02700 PF03401 Tripartite tricarboxylate transporter family receptor KAR29_02710 PF01970 Tripartite tricarboxylate transporter TctA family KAR29_02715 PF02321 Outer membrane efflux protein KAR29_02720 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KAR29_02720 PF00529 HlyD membrane-fusion protein of T1SS KAR29_02725 PF00873 AcrB/AcrD/AcrF family KAR29_02750 PF02899 Phage integrase, N-terminal SAM-like domain KAR29_02750 PF00589 Phage integrase family KAR29_02805 PF03144 Elongation factor Tu domain 2 KAR29_02805 PF03143 Elongation factor Tu C-terminal domain KAR29_02805 PF00009 Elongation factor Tu GTP binding domain KAR29_02810 PF00471 Ribosomal protein L33 KAR29_02820 PF00584 SecE/Sec61-gamma subunits of protein translocation complex KAR29_02825 PF00467 KOW motif KAR29_02825 PF02357 Transcription termination factor nusG KAR29_02830 PF00298 Ribosomal protein L11, RNA binding domain KAR29_02830 PF03946 Ribosomal protein L11, N-terminal domain KAR29_02835 PF00687 Ribosomal protein L1p/L10e family KAR29_02840 PF00466 Ribosomal protein L10 KAR29_02845 PF00542 Ribosomal protein L7/L12 C-terminal domain KAR29_02845 PF16320 Ribosomal protein L7/L12 dimerisation domain KAR29_02850 PF04493 Endonuclease V KAR29_02860 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KAR29_02860 PF00128 Alpha amylase, catalytic domain KAR29_02860 PF02806 Alpha amylase, C-terminal all-beta domain KAR29_02885 PF02653 Branched-chain amino acid transport system / permease component KAR29_02890 PF00005 ABC transporter KAR29_02900 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component KAR29_02905 PF01869 BadF/BadG/BcrA/BcrD ATPase family KAR29_02915 PF00155 Aminotransferase class I and II KAR29_02920 PF01371 Trp repressor protein KAR29_02925 PF00037 4Fe-4S binding domain KAR29_02925 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region KAR29_02925 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit KAR29_02930 PF10576 Iron-sulfur binding domain of endonuclease III KAR29_02930 PF00633 Helix-hairpin-helix motif KAR29_02930 PF00730 HhH-GPD superfamily base excision DNA repair protein KAR29_02935 PF13654 AAA domain KAR29_02935 PF05362 Lon protease (S16) C-terminal proteolytic domain KAR29_02945 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP KAR29_02960 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded KAR29_02965 PF10397 Adenylosuccinate lyase C-terminus KAR29_02965 PF00206 Lyase KAR29_02980 PF00448 SRP54-type protein, GTPase domain KAR29_02980 PF02881 SRP54-type protein, helical bundle domain KAR29_02985 PF04468 PSP1 C-terminal conserved region KAR29_03000 PF02223 Thymidylate kinase KAR29_03010 PF00005 ABC transporter KAR29_03010 PF17850 CysA C-terminal regulatory domain KAR29_03010 PF12857 TOBE-like domain KAR29_03015 PF02405 Permease MlaE KAR29_03035 PF08279 HTH domain KAR29_03035 PF03099 Biotin/lipoate A/B protein ligase family KAR29_03035 PF02237 Biotin protein ligase C terminal domain KAR29_03050 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain KAR29_03050 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain KAR29_03055 PF00156 Phosphoribosyl transferase domain KAR29_03060 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KAR29_03065 PF01180 Dihydroorotate dehydrogenase KAR29_03070 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B KAR29_03075 PF01979 Amidohydrolase family KAR29_03080 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KAR29_03080 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KAR29_03085 PF00156 Phosphoribosyl transferase domain KAR29_03090 PF00035 Double-stranded RNA binding motif KAR29_03090 PF14622 Ribonuclease-III-like KAR29_03095 PF02801 Beta-ketoacyl synthase, C-terminal domain KAR29_03095 PF00109 Beta-ketoacyl synthase, N-terminal domain KAR29_03100 PF00550 Phosphopantetheine attachment site KAR29_03110 PF00698 Acyl transferase domain KAR29_03115 PF03060 Nitronate monooxygenase KAR29_03120 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KAR29_03120 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KAR29_03125 PF02504 Fatty acid synthesis protein KAR29_03135 PF01783 Ribosomal L32p protein family KAR29_03145 PF00871 Acetokinase family KAR29_03150 PF05636 HIGH Nucleotidyl Transferase KAR29_03155 PF01467 Cytidylyltransferase-like KAR29_03165 PF01980 tRNA-methyltransferase O KAR29_03170 PF02390 Putative methyltransferase KAR29_03180 PF00398 Ribosomal RNA adenine dimethylase KAR29_03185 PF00216 Bacterial DNA-binding protein KAR29_03190 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal KAR29_03190 PF01926 50S ribosome-binding GTPase KAR29_03195 PF18319 PriA DNA helicase Cys-rich region (CRR) domain KAR29_03195 PF04851 Type III restriction enzyme, res subunit KAR29_03195 PF17764 3′ DNA-binding domain (3′BD) KAR29_03195 PF18074 Primosomal protein N C-terminal domain KAR29_03195 PF00271 Helicase conserved C-terminal domain KAR29_03200 PF04127 DNA / pantothenate metabolism flavoprotein KAR29_03200 PF02441 Flavoprotein KAR29_03210 PF00625 Guanylate kinase KAR29_03215 PF04025 Domain of unknown function (DUF370) KAR29_03220 PF08340 Domain of unknown function (DUF1732) KAR29_03220 PF03755 YicC-like family, N-terminal region KAR29_03225 PF16360 GTP-binding GTPase Middle Region KAR29_03225 PF01926 50S ribosome-binding GTPase KAR29_03225 PF13167 GTP-binding GTPase N-terminal KAR29_03235 PF02224 Cytidylate kinase KAR29_03240 PF08668 HDOD domain KAR29_03245 PF00849 RNA pseudouridylate synthase KAR29_03245 PF01479 S4 domain KAR29_03250 PF04079 Segregation and condensation complex subunit ScpB KAR29_03255 PF02616 Segregation and condensation protein ScpA KAR29_03260 PF00579 tRNA synthetases class I (W and Y) KAR29_03265 PF01784 NIF3 (NGG1p interacting factor 3) KAR29_03280 PF09182 Bacterial purine repressor, N-terminal KAR29_03280 PF00156 Phosphoribosyl transferase domain KAR29_03285 PF00288 GHMP kinases N terminal domain KAR29_03285 PF08544 GHMP kinases C terminal KAR29_03295 PF00009 Elongation factor Tu GTP binding domain KAR29_03295 PF03144 Elongation factor Tu domain 2 KAR29_03295 PF09105 Elongation factor SelB, winged helix KAR29_03295 PF09106 Elongation factor SelB, winged helix KAR29_03295 PF09107 Elongation factor SelB, winged helix KAR29_03300 PF12390 Selenocysteine synthase N terminal KAR29_03300 PF03841 L-seryl-tRNA selenium transferase KAR29_03305 PF00857 Isochorismatase family KAR29_03320 PF06969 HemN C-terminal domain KAR29_03320 PF04055 Radical SAM superfamily KAR29_03325 PF03144 Elongation factor Tu domain 2 KAR29_03325 PF06421 GTP-binding protein LepA C-terminus KAR29_03325 PF14492 Elongation Factor G, domain II KAR29_03325 PF00679 Elongation factor G C-terminus KAR29_03325 PF00009 Elongation factor Tu GTP binding domain KAR29_03330 PF01259 SAICAR synthetase KAR29_03335 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase KAR29_03345 PF00586 AIR synthase related protein, N-terminal domain KAR29_03345 PF02769 AIR synthase related protein, C-terminal domain KAR29_03345 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain KAR29_03350 PF00156 Phosphoribosyl transferase domain KAR29_03355 PF00586 AIR synthase related protein, N-terminal domain KAR29_03355 PF02769 AIR synthase related protein, C-terminal domain KAR29_03360 PF00551 Formyl transferase KAR29_03365 PF02142 MGS-like domain KAR29_03365 PF01808 AICARFT/IMPCHase bienzyme KAR29_03370 PF02843 Phosphoribosylglycinamide synthetase, C domain KAR29_03370 PF02844 Phosphoribosylglycinamide synthetase, N domain KAR29_03370 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KAR29_03375 PF00731 AIR carboxylase KAR29_03380 PF04055 Radical SAM superfamily KAR29_03380 PF16199 Radical_SAM C-terminal domain KAR29_03385 PF00005 ABC transporter KAR29_03390 PF00005 ABC transporter KAR29_03390 PF12399 Branched-chain amino acid ATP-binding cassette transporter KAR29_03400 PF02653 Branched-chain amino acid transport system / permease component KAR29_03405 PF13458 Periplasmic binding protein KAR29_03415 PF00679 Elongation factor G C-terminus KAR29_03415 PF00009 Elongation factor Tu GTP binding domain KAR29_03415 PF03144 Elongation factor Tu domain 2 KAR29_03420 PF06180 Cobalt chelatase (CbiK) KAR29_03425 PF01032 FecCD transport family KAR29_03430 PF00005 ABC transporter KAR29_03440 PF02570 Precorrin-8X methylmutase KAR29_03445 PF01888 CbiD KAR29_03455 PF05175 Methyltransferase small domain KAR29_03460 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KAR29_03465 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KAR29_03475 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KAR29_03485 PF01488 Shikimate / quinate 5-dehydrogenase KAR29_03485 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain KAR29_03485 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain KAR29_03490 PF10414 Sirohaem synthase dimerisation region KAR29_03490 PF14824 Sirohaem biosynthesis protein central KAR29_03490 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KAR29_03495 PF03900 Porphobilinogen deaminase, C-terminal domain KAR29_03495 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain KAR29_03500 PF10414 Sirohaem synthase dimerisation region KAR29_03500 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KAR29_03505 PF07685 CobB/CobQ-like glutamine amidotransferase domain KAR29_03510 PF00202 Aminotransferase class-III KAR29_03515 PF00490 Delta-aminolevulinic acid dehydratase KAR29_03520 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KAR29_03560 PF00155 Aminotransferase class I and II KAR29_03565 PF03186 CobD/Cbib protein KAR29_03570 PF07685 CobB/CobQ-like glutamine amidotransferase domain KAR29_03570 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KAR29_03575 PF04011 LemA family KAR29_03580 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 KAR29_03580 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain KAR29_03585 PF13247 4Fe-4S dicluster domain KAR29_03590 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KAR29_03590 PF13237 4Fe-4S dicluster domain KAR29_03590 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KAR29_03590 PF00384 Molybdopterin oxidoreductase KAR29_03590 PF01568 Molydopterin dinucleotide binding domain KAR29_03595 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region KAR29_03595 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit KAR29_03595 PF00037 4Fe-4S binding domain KAR29_03605 PF00072 Response regulator receiver domain KAR29_03605 PF00990 Diguanylate cyclase, GGDEF domain KAR29_03610 PF00764 Arginosuccinate synthase KAR29_03615 PF01975 Survival protein SurE KAR29_03620 PF02163 Peptidase family M50 KAR29_03625 PF02272 DHHA1 domain KAR29_03625 PF01368 DHH family KAR29_03625 PF01743 Poly A polymerase head domain KAR29_03625 PF12627 Probable RNA and SrmB- binding site of polymerase A KAR29_03625 PF00571 CBS domain KAR29_03630 PF01121 Dephospho-CoA kinase KAR29_03635 PF13361 UvrD-like helicase C-terminal domain KAR29_03635 PF00580 UvrD/REP helicase N-terminal domain KAR29_03640 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein KAR29_03640 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus KAR29_03650 PF00696 Amino acid kinase family KAR29_03655 PF01765 Ribosome recycling factor KAR29_03660 PF00696 Amino acid kinase family KAR29_03665 PF00889 Elongation factor TS KAR29_03670 PF00318 Ribosomal protein S2 KAR29_03675 PF02583 Metal-sensitive transcriptional repressor KAR29_03705 PF14437 MafB19-like deaminase KAR29_03710 PF02675 S-adenosylmethionine decarboxylase KAR29_03715 PF04073 Aminoacyl-tRNA editing domain KAR29_03720 PF00881 Nitroreductase family KAR29_03725 PF00005 ABC transporter KAR29_03725 PF16326 ABC transporter C-terminal domain KAR29_03725 PF12848 ABC transporter KAR29_03730 PF06196 Protein of unknown function (DUF997) KAR29_03735 PF00474 Sodium:solute symporter family KAR29_03740 PF02653 Branched-chain amino acid transport system / permease component KAR29_03750 PF00005 ABC transporter KAR29_03755 PF02608 ABC transporter substrate-binding protein PnrA-like KAR29_03760 PF00156 Phosphoribosyl transferase domain KAR29_03775 PF00209 Sodium:neurotransmitter symporter family KAR29_03800 PF11855 Protein of unknown function (DUF3375) KAR29_03820 PF03193 RsgA GTPase KAR29_03830 PF01063 Amino-transferase class IV KAR29_03840 PF05598 Transposase domain (DUF772) KAR29_03840 PF01609 Transposase DDE domain KAR29_03845 PF00248 Aldo/keto reductase family KAR29_03850 PF00465 Iron-containing alcohol dehydrogenase KAR29_03855 PF12833 Helix-turn-helix domain KAR29_03855 PF06719 AraC-type transcriptional regulator N-terminus KAR29_03860 PF01425 Amidase KAR29_03875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAR29_03875 PF00512 His Kinase A (phospho-acceptor) domain KAR29_03875 PF01627 Hpt domain KAR29_03875 PF00072 Response regulator receiver domain KAR29_03880 PF02558 Ketopantoate reductase PanE/ApbA KAR29_03880 PF08546 Ketopantoate reductase PanE/ApbA C terminal KAR29_03895 PF01979 Amidohydrolase family KAR29_03895 PF13382 Adenine deaminase C-terminal domain KAR29_03910 PF00149 Calcineurin-like phosphoesterase KAR29_03910 PF02872 5'-nucleotidase, C-terminal domain KAR29_03925 PF00072 Response regulator receiver domain KAR29_03930 PF00795 Carbon-nitrogen hydrolase KAR29_03935 PF00990 Diguanylate cyclase, GGDEF domain KAR29_03940 PF01434 Peptidase family M41 KAR29_03940 PF00004 ATPase family associated with various cellular activities (AAA) KAR29_03940 PF17862 AAA+ lid domain KAR29_03945 PF05958 tRNA (Uracil-5-)-methyltransferase KAR29_03955 PF01966 HD domain KAR29_03965 PF14492 Elongation Factor G, domain II KAR29_03965 PF00009 Elongation factor Tu GTP binding domain KAR29_03965 PF03144 Elongation factor Tu domain 2 KAR29_03965 PF00679 Elongation factor G C-terminus KAR29_03965 PF03764 Elongation factor G, domain IV KAR29_03975 PF01938 TRAM domain KAR29_03975 PF05958 tRNA (Uracil-5-)-methyltransferase KAR29_03980 PF02934 GatB/GatE catalytic domain KAR29_03980 PF02637 GatB domain KAR29_03985 PF01425 Amidase KAR29_03990 PF02686 Glu-tRNAGln amidotransferase C subunit KAR29_03995 PF03119 NAD-dependent DNA ligase C4 zinc finger domain KAR29_03995 PF03120 NAD-dependent DNA ligase OB-fold domain KAR29_03995 PF12826 Helix-hairpin-helix motif KAR29_03995 PF00533 BRCA1 C Terminus (BRCT) domain KAR29_03995 PF01653 NAD-dependent DNA ligase adenylation domain KAR29_04000 PF00152 tRNA synthetases class II (D, K and N) KAR29_04000 PF01336 OB-fold nucleic acid binding domain KAR29_04005 PF01207 Dihydrouridine synthase (Dus) KAR29_04010 PF03309 Type III pantothenate kinase KAR29_04025 PF01938 TRAM domain KAR29_04025 PF00919 Uncharacterized protein family UPF0004 KAR29_04025 PF04055 Radical SAM superfamily KAR29_04030 PF02142 MGS-like domain KAR29_04030 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KAR29_04030 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KAR29_04035 PF00117 Glutamine amidotransferase class-I KAR29_04035 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain KAR29_04045 PF10371 Domain of unknown function KAR29_04045 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II KAR29_04045 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase KAR29_04045 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg KAR29_04045 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KAR29_04055 PF10371 Domain of unknown function KAR29_04055 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II KAR29_04055 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase KAR29_04055 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg KAR29_04055 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KAR29_04060 PF04223 Citrate lyase, alpha subunit (CitF) KAR29_04065 PF03328 HpcH/HpaI aldolase/citrate lyase family KAR29_04070 PF06857 Malonate decarboxylase delta subunit (MdcD) KAR29_04075 PF00180 Isocitrate/isopropylmalate dehydrogenase KAR29_04080 PF00330 Aconitase family (aconitate hydratase) KAR29_04085 PF00301 Rubredoxin KAR29_04090 PF01321 Creatinase/Prolidase N-terminal domain KAR29_04090 PF00557 Metallopeptidase family M24 KAR29_04100 PF02677 Epoxyqueuosine reductase QueH KAR29_04105 PF08704 tRNA methyltransferase complex GCD14 subunit KAR29_04110 PF00672 HAMP domain KAR29_04110 PF01966 HD domain KAR29_04120 PF02472 Biopolymer transport protein ExbD/TolR KAR29_04125 PF01497 Periplasmic binding protein KAR29_04130 PF01618 MotA/TolQ/ExbB proton channel family KAR29_04135 PF02779 Transketolase, pyrimidine binding domain KAR29_04135 PF00456 Transketolase, thiamine diphosphate binding domain KAR29_04140 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KAR29_04140 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KAR29_04145 PF01168 Alanine racemase, N-terminal domain KAR29_04145 PF00842 Alanine racemase, C-terminal domain KAR29_04150 PF01235 Sodium:alanine symporter family KAR29_04160 PF01418 Helix-turn-helix domain, rpiR family KAR29_04160 PF01380 SIS domain KAR29_04170 PF13378 Enolase C-terminal domain-like KAR29_04170 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KAR29_04180 PF00795 Carbon-nitrogen hydrolase KAR29_04185 PF01546 Peptidase family M20/M25/M40 KAR29_04185 PF07687 Peptidase dimerisation domain KAR29_04190 PF02504 Fatty acid synthesis protein KAR29_04195 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KAR29_04205 PF09338 Glycine/sarcosine/betaine reductase component B subunits KAR29_04210 PF00085 Thioredoxin KAR29_04220 PF00209 Sodium:neurotransmitter symporter family KAR29_04225 PF00795 Carbon-nitrogen hydrolase KAR29_04230 PF13277 YmdB-like protein KAR29_04235 PF01966 HD domain KAR29_04235 PF00013 KH domain KAR29_04235 PF12072 Domain of unknown function (DUF3552) KAR29_04245 PF17191 RecG wedge domain KAR29_04245 PF00270 DEAD/DEAH box helicase KAR29_04245 PF00271 Helicase conserved C-terminal domain KAR29_04250 PF05103 DivIVA protein KAR29_04255 PF04472 Cell division protein SepF KAR29_04260 PF01168 Alanine racemase, N-terminal domain KAR29_04270 PF03477 ATP cone domain KAR29_04270 PF02867 Ribonucleotide reductase, barrel domain KAR29_04270 PF00317 Ribonucleotide reductase, all-alpha domain KAR29_04275 PF13419 Haloacid dehalogenase-like hydrolase KAR29_04280 PF10672 S-adenosylmethionine-dependent methyltransferase KAR29_04280 PF17785 PUA-like domain KAR29_04285 PF00491 Arginase family KAR29_04305 PF00120 Glutamine synthetase, catalytic domain KAR29_04305 PF18318 Glutamine synthetase C-terminal domain KAR29_04305 PF12437 Glutamine synthetase type III N terminal KAR29_04310 PF17874 MalT-like TPR region KAR29_04310 PF00196 Bacterial regulatory proteins, luxR family KAR29_04320 PF08334 Type II secretion system (T2SS), protein G KAR29_04320 PF07963 Prokaryotic N-terminal methylation motif KAR29_04325 PF00482 Type II secretion system (T2SS), protein F KAR29_04330 PF00437 Type II/IV secretion system protein KAR29_04335 PF00263 Bacterial type II and III secretion system protein KAR29_04335 PF03958 Bacterial type II/III secretion system short domain KAR29_04380 PF17762 HTH domain found in ParB protein KAR29_04380 PF02195 ParB-like nuclease domain KAR29_04385 PF00772 DnaB-like helicase N terminal domain KAR29_04385 PF03796 DnaB-like helicase C terminal domain KAR29_04390 PF03948 Ribosomal protein L9, C-terminal domain KAR29_04390 PF01281 Ribosomal protein L9, N-terminal domain KAR29_04400 PF01084 Ribosomal protein S18 KAR29_04405 PF00436 Single-strand binding protein family KAR29_04410 PF01250 Ribosomal protein S6 KAR29_04420 PF03485 Arginyl tRNA synthetase N terminal domain KAR29_04420 PF05746 DALR anticodon binding domain KAR29_04420 PF00750 tRNA synthetases class I (R) KAR29_04430 PF02810 SEC-C motif KAR29_04430 PF07517 SecA DEAD-like domain KAR29_04430 PF07516 SecA Wing and Scaffold domain KAR29_04430 PF01043 SecA preprotein cross-linking domain KAR29_04445 PF01546 Peptidase family M20/M25/M40 KAR29_04445 PF07687 Peptidase dimerisation domain KAR29_04450 PF01066 CDP-alcohol phosphatidyltransferase KAR29_04455 PF00005 ABC transporter KAR29_04460 PF12399 Branched-chain amino acid ATP-binding cassette transporter KAR29_04460 PF00005 ABC transporter KAR29_04465 PF11862 Domain of unknown function (DUF3382) KAR29_04465 PF02653 Branched-chain amino acid transport system / permease component KAR29_04470 PF02653 Branched-chain amino acid transport system / permease component KAR29_04480 PF03477 ATP cone domain KAR29_04490 PF01165 Ribosomal protein S21 KAR29_04495 PF01230 HIT domain KAR29_04500 PF00226 DnaJ domain KAR29_04500 PF00684 DnaJ central domain KAR29_04500 PF01556 DnaJ C terminal domain KAR29_04505 PF00012 Hsp70 protein KAR29_04510 PF00919 Uncharacterized protein family UPF0004 KAR29_04510 PF04055 Radical SAM superfamily KAR29_04525 PF00226 DnaJ domain KAR29_04525 PF01556 DnaJ C terminal domain KAR29_04525 PF00684 DnaJ central domain KAR29_04530 PF00012 Hsp70 protein KAR29_04535 PF01025 GrpE KAR29_04540 PF01628 HrcA protein C terminal domain KAR29_04545 PF00300 Histidine phosphatase superfamily (branch 1) KAR29_04550 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KAR29_04550 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAR29_04565 PF00578 AhpC/TSA family KAR29_04570 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KAR29_04580 PF02535 ZIP Zinc transporter KAR29_04595 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component KAR29_04605 PF03480 Bacterial extracellular solute-binding protein, family 7 KAR29_04610 PF00180 Isocitrate/isopropylmalate dehydrogenase KAR29_04615 PF00694 Aconitase C-terminal domain KAR29_04620 PF00330 Aconitase family (aconitate hydratase) KAR29_04635 PF07687 Peptidase dimerisation domain KAR29_04635 PF01546 Peptidase family M20/M25/M40 KAR29_04645 PF02615 Malate/L-lactate dehydrogenase KAR29_04655 PF04474 Protein of unknown function (DUF554) KAR29_04675 PF00378 Enoyl-CoA hydratase/isomerase KAR29_04680 PF02554 Carbon starvation protein CstA KAR29_04680 PF13722 5TM C-terminal transporter carbon starvation CstA KAR29_04690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAR29_04690 PF03466 LysR substrate binding domain KAR29_04695 PF03601 Conserved hypothetical protein 698 KAR29_04705 PF13356 Arm DNA-binding domain KAR29_04705 PF14659 Phage integrase, N-terminal SAM-like domain KAR29_04705 PF00589 Phage integrase family KAR29_04800 PF00574 Clp protease KAR29_04825 PF00589 Phage integrase family KAR29_04845 PF01555 DNA methylase KAR29_04870 PF01695 IstB-like ATP binding protein KAR29_04905 PF01381 Helix-turn-helix KAR29_04935 PF01381 Helix-turn-helix KAR29_05040 PF01032 FecCD transport family KAR29_05050 PF01695 IstB-like ATP binding protein KAR29_05060 PF01032 FecCD transport family KAR29_05065 PF00005 ABC transporter KAR29_05080 PF07883 Cupin domain KAR29_05085 PF03063 Prismane/CO dehydrogenase family KAR29_05090 PF00583 Acetyltransferase (GNAT) family KAR29_05095 PF00709 Adenylosuccinate synthetase KAR29_05105 PF13180 PDZ domain KAR29_05105 PF03572 Peptidase family S41 KAR29_05110 PF04225 Opacity-associated protein A LysM-like domain KAR29_05110 PF01551 Peptidase family M23 KAR29_05115 PF02687 FtsX-like permease family KAR29_05115 PF18075 FtsX extracellular domain KAR29_05120 PF00005 ABC transporter KAR29_05125 PF13292 1-deoxy-D-xylulose-5-phosphate synthase KAR29_05125 PF02779 Transketolase, pyrimidine binding domain KAR29_05125 PF02780 Transketolase, C-terminal domain KAR29_05130 PF00456 Transketolase, thiamine diphosphate binding domain KAR29_05130 PF02779 Transketolase, pyrimidine binding domain KAR29_05130 PF02780 Transketolase, C-terminal domain KAR29_05145 PF02545 Maf-like protein KAR29_05155 PF02673 Bacitracin resistance protein BacA KAR29_05165 PF00753 Metallo-beta-lactamase superfamily KAR29_05165 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KAR29_05165 PF17770 Ribonuclease J C-terminal domain KAR29_05170 PF01116 Fructose-bisphosphate aldolase class-II KAR29_05195 PF01584 CheW-like domain KAR29_05200 PF00672 HAMP domain KAR29_05200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAR29_05200 PF02743 Cache domain KAR29_05205 PF07687 Peptidase dimerisation domain KAR29_05205 PF01546 Peptidase family M20/M25/M40 KAR29_05210 PF03606 C4-dicarboxylate anaerobic carrier KAR29_05215 PF01614 Bacterial transcriptional regulator KAR29_05215 PF09339 IclR helix-turn-helix domain KAR29_05220 PF07729 FCD domain KAR29_05220 PF00392 Bacterial regulatory proteins, gntR family KAR29_05225 PF00155 Aminotransferase class I and II KAR29_05230 PF01370 NAD dependent epimerase/dehydratase family KAR29_05250 PF03328 HpcH/HpaI aldolase/citrate lyase family KAR29_05255 PF00293 NUDIX domain KAR29_05255 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain KAR29_05255 PF09297 NADH pyrophosphatase zinc ribbon domain KAR29_05280 PF00934 PE family KAR29_05280 PF01436 NHL repeat KAR29_05290 PF00873 AcrB/AcrD/AcrF family KAR29_05295 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KAR29_05310 PF04055 Radical SAM superfamily KAR29_05315 PF02743 Cache domain KAR29_05315 PF00672 HAMP domain KAR29_05315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAR29_05320 PF00111 2Fe-2S iron-sulfur cluster binding domain KAR29_05320 PF01799 [2Fe-2S] binding domain KAR29_05325 PF00941 FAD binding domain in molybdopterin dehydrogenase KAR29_05325 PF03450 CO dehydrogenase flavoprotein C-terminal domain KAR29_05330 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain KAR29_05330 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase KAR29_05335 PF00221 Aromatic amino acid lyase KAR29_05340 PF02028 BCCT, betaine/carnitine/choline family transporter KAR29_05345 PF00202 Aminotransferase class-III KAR29_05355 PF00155 Aminotransferase class I and II KAR29_05360 PF01177 Asp/Glu/Hydantoin racemase KAR29_05365 PF02567 Phenazine biosynthesis-like protein KAR29_05380 PF01614 Bacterial transcriptional regulator KAR29_05380 PF09339 IclR helix-turn-helix domain KAR29_05385 PF17391 Urocanase N-terminal domain KAR29_05385 PF01175 Urocanase Rossmann-like domain KAR29_05385 PF17392 Urocanase C-terminal domain KAR29_05390 PF07670 Nucleoside recognition KAR29_05395 PF01268 Formate--tetrahydrofolate ligase KAR29_05405 PF00899 ThiF family KAR29_05415 PF00005 ABC transporter KAR29_05415 PF00664 ABC transporter transmembrane region KAR29_05420 PF00664 ABC transporter transmembrane region KAR29_05420 PF03412 Peptidase C39 family KAR29_05420 PF00005 ABC transporter KAR29_05440 PF00919 Uncharacterized protein family UPF0004 KAR29_05440 PF04055 Radical SAM superfamily KAR29_05455 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding KAR29_05470 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit KAR29_05475 PF05145 Transition state regulatory protein AbrB KAR29_05505 PF02423 Ornithine cyclodeaminase/mu-crystallin family KAR29_05510 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component KAR29_05520 PF03480 Bacterial extracellular solute-binding protein, family 7 KAR29_05525 PF00072 Response regulator receiver domain KAR29_05525 PF00990 Diguanylate cyclase, GGDEF domain KAR29_05530 PF01339 CheB methylesterase KAR29_05530 PF00072 Response regulator receiver domain KAR29_05535 PF01627 Hpt domain KAR29_05535 PF00072 Response regulator receiver domain KAR29_05535 PF01584 CheW-like domain KAR29_05535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAR29_05545 PF01584 CheW-like domain KAR29_05550 PF01739 CheR methyltransferase, SAM binding domain KAR29_05560 PF03466 LysR substrate binding domain KAR29_05560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAR29_05565 PF13378 Enolase C-terminal domain-like KAR29_05565 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KAR29_05580 PF01435 Peptidase family M48 KAR29_05590 PF01738 Dienelactone hydrolase family KAR29_05675 PF07664 Ferrous iron transport protein B C terminus KAR29_05675 PF17910 FeoB cytosolic helical domain KAR29_05675 PF02421 Ferrous iron transport protein B KAR29_05675 PF04023 FeoA domain KAR29_05675 PF07670 Nucleoside recognition KAR29_05685 PF01546 Peptidase family M20/M25/M40 KAR29_05685 PF07687 Peptidase dimerisation domain KAR29_05690 PF07969 Amidohydrolase family KAR29_05695 PF03606 C4-dicarboxylate anaerobic carrier KAR29_05705 PF03553 Na+/H+ antiporter family KAR29_05715 PF00004 ATPase family associated with various cellular activities (AAA) KAR29_05715 PF07724 AAA domain (Cdc48 subfamily) KAR29_05715 PF17871 AAA lid domain KAR29_05715 PF02861 Clp amino terminal domain, pathogenicity island component KAR29_05715 PF10431 C-terminal, D2-small domain, of ClpB protein KAR29_05720 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain KAR29_05730 PF05848 CtsR N-terminal HTH domain KAR29_05730 PF17727 CtsR C-terminal dimerization domain KAR29_05735 PF02660 Glycerol-3-phosphate acyltransferase KAR29_05740 PF13380 CoA binding domain KAR29_05740 PF00583 Acetyltransferase (GNAT) family KAR29_05740 PF13607 Succinyl-CoA ligase like flavodoxin domain KAR29_05745 PF02541 Ppx/GppA phosphatase family KAR29_05760 PF17941 Polyphosphate kinase C-terminal domain 1 KAR29_05760 PF13089 Polyphosphate kinase N-terminal domain KAR29_05760 PF13090 Polyphosphate kinase C-terminal domain 2 KAR29_05760 PF02503 Polyphosphate kinase middle domain KAR29_05765 PF01966 HD domain KAR29_05765 PF00013 KH domain KAR29_05765 PF12072 Domain of unknown function (DUF3552) KAR29_05770 PF00571 CBS domain KAR29_05770 PF03471 Transporter associated domain KAR29_05785 PF03063 Prismane/CO dehydrogenase family KAR29_05795 PF03577 Peptidase family C69 KAR29_05805 PF06463 Molybdenum Cofactor Synthesis C KAR29_05805 PF04055 Radical SAM superfamily KAR29_05815 PF09338 Glycine/sarcosine/betaine reductase component B subunits KAR29_05820 PF07905 Purine catabolism regulatory protein-like family KAR29_05820 PF13556 PucR C-terminal helix-turn-helix domain KAR29_05825 PF00005 ABC transporter KAR29_05825 PF00664 ABC transporter transmembrane region KAR29_05830 PF03649 Uncharacterised protein family (UPF0014) KAR29_05840 PF03553 Na+/H+ antiporter family KAR29_05845 PF00392 Bacterial regulatory proteins, gntR family KAR29_05845 PF07729 FCD domain KAR29_05855 PF03352 Methyladenine glycosylase KAR29_05860 PF00582 Universal stress protein family KAR29_05865 PF01965 DJ-1/PfpI family KAR29_05885 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain KAR29_05885 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KAR29_05890 PF01979 Amidohydrolase family KAR29_05910 PF01475 Ferric uptake regulator family KAR29_05915 PF16123 Hydroxyacylglutathione hydrolase C-terminus KAR29_05915 PF00753 Metallo-beta-lactamase superfamily KAR29_05935 PF06071 Protein of unknown function (DUF933) KAR29_05935 PF01926 50S ribosome-binding GTPase KAR29_05940 PF03553 Na+/H+ antiporter family KAR29_05940 PF13726 Na+-H+ antiporter family KAR29_05955 PF00356 Bacterial regulatory proteins, lacI family KAR29_05960 PF00485 Phosphoribulokinase / Uridine kinase family KAR29_05965 PF07729 FCD domain KAR29_05965 PF00392 Bacterial regulatory proteins, gntR family KAR29_05975 PF00330 Aconitase family (aconitate hydratase) KAR29_05980 PF00694 Aconitase C-terminal domain KAR29_05985 PF00330 Aconitase family (aconitate hydratase) KAR29_05990 PF00694 Aconitase C-terminal domain KAR29_05995 PF18324 Hypothetical protein TT1725 KAR29_05995 PF00180 Isocitrate/isopropylmalate dehydrogenase KAR29_06000 PF06857 Malonate decarboxylase delta subunit (MdcD) KAR29_06005 PF03328 HpcH/HpaI aldolase/citrate lyase family KAR29_06010 PF04223 Citrate lyase, alpha subunit (CitF) KAR29_06020 PF01923 Cobalamin adenosyltransferase KAR29_06025 PF07729 FCD domain KAR29_06025 PF00392 Bacterial regulatory proteins, gntR family KAR29_06040 PF00395 S-layer homology domain KAR29_06055 PF00205 Thiamine pyrophosphate enzyme, central domain KAR29_06055 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KAR29_06055 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KAR29_06060 PF01370 NAD dependent epimerase/dehydratase family KAR29_06065 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KAR29_06070 PF16363 GDP-mannose 4,6 dehydratase KAR29_06075 PF00483 Nucleotidyl transferase KAR29_06085 PF00483 Nucleotidyl transferase KAR29_06085 PF01050 Mannose-6-phosphate isomerase KAR29_06090 PF01370 NAD dependent epimerase/dehydratase family KAR29_06095 PF16363 GDP-mannose 4,6 dehydratase KAR29_06100 PF13439 Glycosyltransferase Family 4 KAR29_06100 PF00534 Glycosyl transferases group 1 KAR29_06125 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAR29_06125 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KAR29_06130 PF00154 recA bacterial DNA recombination protein KAR29_06135 PF02834 LigT like Phosphoesterase KAR29_06140 PF02464 Competence-damaged protein KAR29_06140 PF18146 Damage-inducible protein CinA KH domain KAR29_06140 PF00994 Probable molybdopterin binding domain KAR29_06145 PF04608 Phosphatidylglycerophosphatase A KAR29_06150 PF04055 Radical SAM superfamily KAR29_06150 PF18693 TRAM domain KAR29_06150 PF00919 Uncharacterized protein family UPF0004 KAR29_06160 PF00834 Ribulose-phosphate 3 epimerase family KAR29_06165 PF03793 PASTA domain KAR29_06165 PF00069 Protein kinase domain KAR29_06170 PF01189 16S rRNA methyltransferase RsmB/F KAR29_06170 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF KAR29_06170 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF KAR29_06180 PF04298 Putative neutral zinc metallopeptidase KAR29_06185 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KAR29_06190 PF00392 Bacterial regulatory proteins, gntR family KAR29_06190 PF07729 FCD domain KAR29_06205 PF00155 Aminotransferase class I and II KAR29_06205 PF00392 Bacterial regulatory proteins, gntR family KAR29_06215 PF08218 Citrate lyase ligase C-terminal domain KAR29_06215 PF00583 Acetyltransferase (GNAT) family KAR29_06220 PF07687 Peptidase dimerisation domain KAR29_06220 PF01546 Peptidase family M20/M25/M40 KAR29_06230 PF00849 RNA pseudouridylate synthase KAR29_06230 PF01479 S4 domain KAR29_06235 PF01966 HD domain KAR29_06235 PF01336 OB-fold nucleic acid binding domain KAR29_06240 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase KAR29_06240 PF01676 Metalloenzyme superfamily KAR29_06245 PF00300 Histidine phosphatase superfamily (branch 1) KAR29_06250 PF01842 ACT domain KAR29_06250 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KAR29_06250 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KAR29_06255 PF00266 Aminotransferase class-V KAR29_06260 PF01546 Peptidase family M20/M25/M40 KAR29_06260 PF07687 Peptidase dimerisation domain KAR29_06275 PF00271 Helicase conserved C-terminal domain KAR29_06275 PF00270 DEAD/DEAH box helicase KAR29_06275 PF08148 DSHCT (NUC185) domain KAR29_06285 PF00155 Aminotransferase class I and II KAR29_06290 PF00155 Aminotransferase class I and II KAR29_06295 PF10396 GTP-binding protein TrmE N-terminus KAR29_06295 PF12631 MnmE helical domain KAR29_06295 PF01926 50S ribosome-binding GTPase KAR29_06300 PF03606 C4-dicarboxylate anaerobic carrier KAR29_06310 PF01979 Amidohydrolase family KAR29_06340 PF07733 Bacterial DNA polymerase III alpha NTPase domain KAR29_06340 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KAR29_06340 PF14579 Helix-hairpin-helix motif KAR29_06340 PF02811 PHP domain KAR29_06340 PF00929 Exonuclease KAR29_06340 PF01336 OB-fold nucleic acid binding domain KAR29_06340 PF11490 DNA polymerase III polC-type N-terminus II KAR29_06345 PF00892 EamA-like transporter family KAR29_06350 PF07969 Amidohydrolase family KAR29_06355 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin KAR29_06360 PF12161 HsdM N-terminal domain KAR29_06360 PF02384 N-6 DNA Methylase KAR29_06370 PF01420 Type I restriction modification DNA specificity domain KAR29_06375 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) KAR29_06375 PF12008 Type I restriction and modification enzyme - subunit R C terminal KAR29_06375 PF18766 SWI2/SNF2 ATPase KAR29_06485 PF01171 PP-loop family KAR29_06485 PF11734 TilS substrate C-terminal domain KAR29_06490 PF00156 Phosphoribosyl transferase domain KAR29_06495 PF00004 ATPase family associated with various cellular activities (AAA) KAR29_06495 PF17862 AAA+ lid domain KAR29_06495 PF06480 FtsH Extracellular KAR29_06495 PF01434 Peptidase family M41 KAR29_06500 PF00271 Helicase conserved C-terminal domain KAR29_06500 PF04851 Type III restriction enzyme, res subunit KAR29_06500 PF02151 UvrB/uvrC motif KAR29_06500 PF17757 UvrB interaction domain KAR29_06500 PF12344 Ultra-violet resistance protein B KAR29_06505 PF00005 ABC transporter KAR29_06505 PF17755 UvrA DNA-binding domain KAR29_06505 PF17760 UvrA interaction domain KAR29_06510 PF00588 SpoU rRNA Methylase family KAR29_06510 PF08032 RNA 2'-O ribose methyltransferase substrate binding KAR29_06520 PF01648 4'-phosphopantetheinyl transferase superfamily KAR29_06525 PF01256 Carbohydrate kinase KAR29_06525 PF03853 YjeF-related protein N-terminus KAR29_06530 PF00005 ABC transporter KAR29_06535 PF00814 Glycoprotease family KAR29_06545 PF04324 BFD-like [2Fe-2S] binding domain KAR29_06545 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAR29_06560 PF01266 FAD dependent oxidoreductase KAR29_06570 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II KAR29_06570 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase KAR29_06570 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg KAR29_06575 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KAR29_06585 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KAR29_06585 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KAR29_06590 PF01938 TRAM domain KAR29_06590 PF05958 tRNA (Uracil-5-)-methyltransferase KAR29_06605 PF01496 V-type ATPase 116kDa subunit family KAR29_06610 PF00137 ATP synthase subunit C KAR29_06615 PF01991 ATP synthase (E/31 kDa) subunit KAR29_06620 PF01992 ATP synthase (C/AC39) subunit KAR29_06630 PF16886 ATPsynthase alpha/beta subunit N-term extension KAR29_06630 PF02874 ATP synthase alpha/beta family, beta-barrel domain KAR29_06630 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KAR29_06635 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KAR29_06635 PF02874 ATP synthase alpha/beta family, beta-barrel domain KAR29_06640 PF01813 ATP synthase subunit D KAR29_06645 PF00132 Bacterial transferase hexapeptide (six repeats) KAR29_06650 PF01739 CheR methyltransferase, SAM binding domain KAR29_06650 PF03705 CheR methyltransferase, all-alpha domain KAR29_06660 PF02381 MraZ protein, putative antitoxin-like KAR29_06665 PF01795 MraW methylase family KAR29_06675 PF03717 Penicillin-binding Protein dimerisation domain KAR29_06675 PF00905 Penicillin binding protein transpeptidase domain KAR29_06680 PF01225 Mur ligase family, catalytic domain KAR29_06680 PF08245 Mur ligase middle domain KAR29_06680 PF02875 Mur ligase family, glutamate ligase domain KAR29_06685 PF01225 Mur ligase family, catalytic domain KAR29_06685 PF02875 Mur ligase family, glutamate ligase domain KAR29_06685 PF08245 Mur ligase middle domain KAR29_06690 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 KAR29_06690 PF00953 Glycosyl transferase family 4 KAR29_06695 PF08245 Mur ligase middle domain KAR29_06695 PF02875 Mur ligase family, glutamate ligase domain KAR29_06700 PF01098 Cell cycle protein KAR29_06705 PF04101 Glycosyltransferase family 28 C-terminal domain KAR29_06705 PF03033 Glycosyltransferase family 28 N-terminal domain KAR29_06710 PF01225 Mur ligase family, catalytic domain KAR29_06710 PF02875 Mur ligase family, glutamate ligase domain KAR29_06710 PF08245 Mur ligase middle domain KAR29_06715 PF01565 FAD binding domain KAR29_06715 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KAR29_06725 PF02491 SHS2 domain inserted in FTSA KAR29_06730 PF00091 Tubulin/FtsZ family, GTPase domain KAR29_06730 PF12327 FtsZ family, C-terminal domain KAR29_06740 PF00994 Probable molybdopterin binding domain KAR29_06740 PF03454 MoeA C-terminal region (domain IV) KAR29_06740 PF03453 MoeA N-terminal region (domain I and II) KAR29_06745 PF00994 Probable molybdopterin binding domain KAR29_06745 PF03454 MoeA C-terminal region (domain IV) KAR29_06745 PF03453 MoeA N-terminal region (domain I and II) KAR29_06750 PF06463 Molybdenum Cofactor Synthesis C KAR29_06750 PF04055 Radical SAM superfamily KAR29_06755 PF01967 MoaC family KAR29_06760 PF00994 Probable molybdopterin binding domain KAR29_06765 PF03668 P-loop ATPase protein family KAR29_06770 PF01933 Uncharacterised protein family UPF0052 KAR29_06775 PF02650 WhiA C-terminal HTH domain KAR29_06775 PF14527 WhiA LAGLIDADG-like domain KAR29_06775 PF10298 WhiA N-terminal LAGLIDADG-like domain KAR29_06785 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KAR29_06785 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KAR29_06790 PF00162 Phosphoglycerate kinase KAR29_06795 PF00121 Triosephosphate isomerase KAR29_06805 PF03816 Cell envelope-related transcriptional attenuator domain KAR29_06810 PF01467 Cytidylyltransferase-like KAR29_06815 PF09269 Domain of unknown function (DUF1967) KAR29_06815 PF01926 50S ribosome-binding GTPase KAR29_06815 PF01018 GTP1/OBG KAR29_06820 PF01016 Ribosomal L27 protein KAR29_06830 PF00829 Ribosomal prokaryotic L21 protein KAR29_06835 PF02463 RecF/RecN/SMC N terminal domain KAR29_06840 PF01513 ATP-NAD kinase KAR29_06845 PF01728 FtsJ-like methyltransferase KAR29_06845 PF01479 S4 domain KAR29_06850 PF13292 1-deoxy-D-xylulose-5-phosphate synthase KAR29_06850 PF02779 Transketolase, pyrimidine binding domain KAR29_06850 PF02780 Transketolase, C-terminal domain KAR29_06855 PF00348 Polyprenyl synthetase KAR29_06860 PF02609 Exonuclease VII small subunit KAR29_06865 PF00830 Ribosomal L28 family KAR29_06875 PF13491 4TM region of DNA translocase FtsK/SpoIIIE KAR29_06875 PF17854 FtsK alpha domain KAR29_06875 PF09397 Ftsk gamma domain KAR29_06875 PF01580 FtsK/SpoIIIE family KAR29_06880 PF01523 Putative modulator of DNA gyrase KAR29_06885 PF01018 GTP1/OBG KAR29_06885 PF01926 50S ribosome-binding GTPase KAR29_06890 PF02618 YceG-like family KAR29_06895 PF00221 Aromatic amino acid lyase KAR29_06905 PF01871 AMMECR1 KAR29_06905 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase KAR29_06910 PF02547 Queuosine biosynthesis protein KAR29_06915 PF08486 Stage II sporulation protein KAR29_06925 PF05496 Holliday junction DNA helicase RuvB P-loop domain KAR29_06925 PF05491 RuvB C-terminal winged helix domain KAR29_06925 PF17864 RuvB AAA lid domain KAR29_06930 PF01330 RuvA N terminal domain KAR29_06930 PF07499 RuvA, C-terminal domain KAR29_06935 PF02075 Crossover junction endodeoxyribonuclease RuvC KAR29_06940 PF01709 Transcriptional regulator KAR29_06945 PF02540 NAD synthase KAR29_06950 PF08753 NikR C terminal nickel binding domain KAR29_06950 PF01402 Ribbon-helix-helix protein, copG family KAR29_06955 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KAR29_06955 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KAR29_06965 PF17284 Spermidine synthase tetramerisation domain KAR29_06970 PF04551 GcpE protein KAR29_06975 PF13180 PDZ domain KAR29_06975 PF02163 Peptidase family M50 KAR29_06980 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KAR29_06980 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KAR29_06980 PF13288 DXP reductoisomerase C-terminal domain KAR29_06990 PF01255 Putative undecaprenyl diphosphate synthase KAR29_06995 PF03167 Uracil DNA glycosylase superfamily KAR29_07000 PF05496 Holliday junction DNA helicase RuvB P-loop domain KAR29_07000 PF17864 RuvB AAA lid domain KAR29_07000 PF05491 RuvB C-terminal winged helix domain KAR29_07005 PF00155 Aminotransferase class I and II KAR29_07010 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KAR29_07015 PF00953 Glycosyl transferase family 4 KAR29_07025 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit KAR29_07040 PF01039 Carboxyl transferase domain KAR29_07060 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KAR29_07060 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KAR29_07070 PF08245 Mur ligase middle domain KAR29_07075 PF08264 Anticodon-binding domain of tRNA KAR29_07075 PF00133 tRNA synthetases class I (I, L, M and V) KAR29_07075 PF10458 Valyl tRNA synthetase tRNA binding arm KAR29_07080 PF01926 50S ribosome-binding GTPase KAR29_07085 PF00004 ATPase family associated with various cellular activities (AAA) KAR29_07085 PF05362 Lon protease (S16) C-terminal proteolytic domain KAR29_07085 PF02190 ATP-dependent protease La (LON) substrate-binding domain KAR29_07090 PF07724 AAA domain (Cdc48 subfamily) KAR29_07090 PF10431 C-terminal, D2-small domain, of ClpB protein KAR29_07090 PF06689 ClpX C4-type zinc finger KAR29_07095 PF00574 Clp protease KAR29_07100 PF05697 Bacterial trigger factor protein (TF) KAR29_07100 PF05698 Bacterial trigger factor protein (TF) C-terminus KAR29_07100 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KAR29_07115 PF00924 Mechanosensitive ion channel KAR29_07170 PF02653 Branched-chain amino acid transport system / permease component KAR29_07175 PF00005 ABC transporter KAR29_07185 PF05670 NFACT protein RNA binding domain KAR29_07190 PF01479 S4 domain KAR29_07190 PF00849 RNA pseudouridylate synthase KAR29_07195 PF08264 Anticodon-binding domain of tRNA KAR29_07195 PF06827 Zinc finger found in FPG and IleRS KAR29_07195 PF00133 tRNA synthetases class I (I, L, M and V) KAR29_07215 PF01687 Riboflavin kinase KAR29_07215 PF06574 FAD synthetase KAR29_07220 PF16198 tRNA pseudouridylate synthase B C-terminal domain KAR29_07220 PF01509 TruB family pseudouridylate synthase (N terminal domain) KAR29_07225 PF01368 DHH family KAR29_07225 PF02272 DHHA1 domain KAR29_07230 PF02033 Ribosome-binding factor A KAR29_07240 PF00009 Elongation factor Tu GTP binding domain KAR29_07240 PF11987 Translation-initiation factor 2 KAR29_07240 PF04760 Translation initiation factor IF-2, N-terminal region KAR29_07255 PF13184 NusA-like KH domain KAR29_07255 PF08529 NusA N-terminal domain KAR29_07255 PF00575 S1 RNA binding domain KAR29_07260 PF02576 RimP N-terminal domain KAR29_07260 PF17384 RimP C-terminal SH3 domain KAR29_07265 PF00571 CBS domain KAR29_07265 PF00478 IMP dehydrogenase / GMP reductase domain KAR29_07270 PF03330 Lytic transglycolase KAR29_07275 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase KAR29_07275 PF02542 YgbB family KAR29_07285 PF02132 RecR protein KAR29_07285 PF13662 Toprim domain KAR29_07290 PF02575 YbaB/EbfC DNA-binding family KAR29_07295 PF02590 Predicted SPOUT methyltransferase KAR29_07305 PF03808 Glycosyl transferase WecB/TagA/CpsF family KAR29_07310 PF02403 Seryl-tRNA synthetase N-terminal domain KAR29_07310 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KAR29_07315 PF00885 6,7-dimethyl-8-ribityllumazine synthase KAR29_07320 PF00925 GTP cyclohydrolase II KAR29_07320 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KAR29_07325 PF00677 Lumazine binding domain KAR29_07330 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KAR29_07330 PF01872 RibD C-terminal domain KAR29_07335 PF08459 UvrC Helix-hairpin-helix N-terminal KAR29_07335 PF02151 UvrB/uvrC motif KAR29_07335 PF01541 GIY-YIG catalytic domain KAR29_07340 PF09190 DALR domain KAR29_07340 PF01406 tRNA synthetases class I (C) catalytic domain KAR29_07350 PF00883 Cytosol aminopeptidase family, catalytic domain KAR29_07350 PF02789 Cytosol aminopeptidase family, N-terminal domain KAR29_07355 PF02743 Cache domain KAR29_07355 PF00672 HAMP domain KAR29_07355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAR29_07360 PF14245 Type IV pilin PilA KAR29_07360 PF07963 Prokaryotic N-terminal methylation motif KAR29_07365 PF00809 Pterin binding enzyme KAR29_07370 PF01242 6-pyruvoyl tetrahydropterin synthase KAR29_07375 PF13344 Haloacid dehalogenase-like hydrolase KAR29_07375 PF00293 NUDIX domain KAR29_07385 PF00701 Dihydrodipicolinate synthetase family KAR29_07390 PF00266 Aminotransferase class-V KAR29_07405 PF02885 Glycosyl transferase family, helical bundle domain KAR29_07405 PF00591 Glycosyl transferase family, a/b domain KAR29_07405 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain KAR29_07410 PF01048 Phosphorylase superfamily KAR29_07415 PF00589 Phage integrase family KAR29_07415 PF02899 Phage integrase, N-terminal SAM-like domain KAR29_07420 PF00293 NUDIX domain KAR29_07450 PF02911 Formyl transferase, C-terminal domain KAR29_07450 PF00551 Formyl transferase KAR29_07455 PF01327 Polypeptide deformylase KAR29_07460 PF00575 S1 RNA binding domain KAR29_07465 PF02401 LytB protein KAR29_07475 PF01119 DNA mismatch repair protein, C-terminal domain KAR29_07475 PF08676 MutL C terminal dimerisation domain KAR29_07480 PF01624 MutS domain I KAR29_07480 PF05188 MutS domain II KAR29_07480 PF05192 MutS domain III KAR29_07480 PF05190 MutS family domain IV KAR29_07480 PF00488 MutS domain V KAR29_07485 PF03652 Holliday junction resolvase KAR29_07490 PF02272 DHHA1 domain KAR29_07490 PF01411 tRNA synthetases class II (A) KAR29_07490 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KAR29_07495 PF01979 Amidohydrolase family KAR29_07500 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KAR29_07500 PF05221 S-adenosyl-L-homocysteine hydrolase KAR29_07505 PF01008 Initiation factor 2 subunit family KAR29_07510 PF02601 Exonuclease VII, large subunit KAR29_07510 PF13742 OB-fold nucleic acid binding domain KAR29_07515 PF01029 NusB family KAR29_07535 PF01132 Elongation factor P (EF-P) OB domain KAR29_07535 PF08207 Elongation factor P (EF-P) KOW-like domain KAR29_07535 PF09285 Elongation factor P, C-terminal KAR29_07540 PF07660 Secretin and TonB N terminus short domain KAR29_07540 PF03958 Bacterial type II/III secretion system short domain KAR29_07540 PF00263 Bacterial type II and III secretion system protein KAR29_07540 PF11741 AMIN domain KAR29_07585 PF07963 Prokaryotic N-terminal methylation motif KAR29_07585 PF08334 Type II secretion system (T2SS), protein G KAR29_07590 PF07963 Prokaryotic N-terminal methylation motif KAR29_07590 PF08334 Type II secretion system (T2SS), protein G KAR29_07595 PF00482 Type II secretion system (T2SS), protein F KAR29_07600 PF00437 Type II/IV secretion system protein KAR29_07605 PF00437 Type II/IV secretion system protein KAR29_07605 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KAR29_07635 PF00912 Transglycosylase KAR29_07635 PF00905 Penicillin binding protein transpeptidase domain KAR29_07640 PF00391 PEP-utilising enzyme, mobile domain KAR29_07640 PF02896 PEP-utilising enzyme, TIM barrel domain KAR29_07640 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain KAR29_07645 PF03618 Kinase/pyrophosphorylase KAR29_07650 PF02092 Glycyl-tRNA synthetase beta subunit KAR29_07650 PF05746 DALR anticodon binding domain KAR29_07655 PF02091 Glycyl-tRNA synthetase alpha subunit KAR29_07665 PF01926 50S ribosome-binding GTPase KAR29_07665 PF07650 KH domain KAR29_07670 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KAR29_07675 PF00571 CBS domain KAR29_07675 PF03471 Transporter associated domain KAR29_07675 PF01595 Cyclin M transmembrane N-terminal domain KAR29_07680 PF02130 Uncharacterized protein family UPF0054 KAR29_07685 PF07698 7TM receptor with intracellular HD hydrolase KAR29_07685 PF07697 7TM-HD extracellular KAR29_07685 PF01966 HD domain KAR29_07690 PF02562 PhoH-like protein KAR29_07695 PF01106 NifU-like domain KAR29_07700 PF00364 Biotin-requiring enzyme KAR29_07700 PF00682 HMGL-like KAR29_07700 PF02436 Conserved carboxylase domain KAR29_07705 PF03819 MazG nucleotide pyrophosphohydrolase domain KAR29_07710 PF17757 UvrB interaction domain KAR29_07710 PF00271 Helicase conserved C-terminal domain KAR29_07710 PF03461 TRCF domain KAR29_07710 PF02559 CarD-like/TRCF domain KAR29_07710 PF00270 DEAD/DEAH box helicase KAR29_07715 PF01195 Peptidyl-tRNA hydrolase KAR29_07720 PF14693 Ribosomal protein TL5, C-terminal domain KAR29_07720 PF01386 Ribosomal L25p family KAR29_07725 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KAR29_07725 PF14572 Phosphoribosyl synthetase-associated domain KAR29_07730 PF00132 Bacterial transferase hexapeptide (six repeats) KAR29_07730 PF12804 MobA-like NTP transferase domain KAR29_07740 PF01475 Ferric uptake regulator family KAR29_07755 PF01380 SIS domain KAR29_07760 PF00483 Nucleotidyl transferase KAR29_07765 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KAR29_07765 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KAR29_07765 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KAR29_07765 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KAR29_07775 PF02457 DisA bacterial checkpoint controller nucleotide-binding KAR29_07780 PF01168 Alanine racemase, N-terminal domain KAR29_07785 PF01261 Xylose isomerase-like TIM barrel KAR29_07790 PF00293 NUDIX domain KAR29_07795 PF00391 PEP-utilising enzyme, mobile domain KAR29_07795 PF02887 Pyruvate kinase, alpha/beta domain KAR29_07795 PF00224 Pyruvate kinase, barrel domain KAR29_07800 PF02081 Tryptophan RNA-binding attenuator protein KAR29_07805 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KAR29_07805 PF07733 Bacterial DNA polymerase III alpha NTPase domain KAR29_07805 PF02811 PHP domain KAR29_07805 PF14579 Helix-hairpin-helix motif KAR29_07810 PF12169 DNA polymerase III subunits gamma and tau domain III KAR29_07815 PF01435 Peptidase family M48 KAR29_07830 PF01451 Low molecular weight phosphotyrosine protein phosphatase KAR29_07835 PF00571 CBS domain KAR29_07835 PF01368 DHH family KAR29_07835 PF02272 DHHA1 domain KAR29_07835 PF01743 Poly A polymerase head domain KAR29_07840 PF00294 pfkB family carbohydrate kinase KAR29_07845 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAR29_07850 PF17827 PrmC N-terminal domain KAR29_07850 PF05175 Methyltransferase small domain KAR29_07855 PF03462 PCRF domain KAR29_07855 PF00472 RF-1 domain KAR29_07860 PF07136 Protein of unknown function (DUF1385) KAR29_07865 PF02511 Thymidylate synthase complementing protein KAR29_07870 PF01197 Ribosomal protein L31 KAR29_07890 PF16868 NMT1-like family KAR29_07895 PF00313 'Cold-shock' DNA-binding domain KAR29_07900 PF00313 'Cold-shock' DNA-binding domain KAR29_07930 PF00476 DNA polymerase family A KAR29_07930 PF01367 5'-3' exonuclease, C-terminal SAM fold KAR29_07930 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KAR29_07930 PF09281 Taq polymerase, exonuclease KAR29_07935 PF00749 tRNA synthetases class I (E and Q), catalytic domain KAR29_07940 PF00710 Asparaginase, N-terminal KAR29_07940 PF17763 Glutaminase/Asparaginase C-terminal domain KAR29_07960 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit KAR29_07960 PF00374 Nickel-dependent hydrogenase KAR29_07970 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit KAR29_07980 PF00361 Proton-conducting membrane transporter KAR29_08025 PF01713 Smr domain KAR29_08025 PF00488 MutS domain V KAR29_08045 PF03147 Ferredoxin-fold anticodon binding domain KAR29_08045 PF01588 Putative tRNA binding domain KAR29_08045 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain KAR29_08045 PF03483 B3/4 domain KAR29_08045 PF03484 tRNA synthetase B5 domain KAR29_08050 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain KAR29_08050 PF01409 tRNA synthetases class II core domain (F) KAR29_08055 PF02080 TrkA-C domain KAR29_08055 PF02254 TrkA-N domain KAR29_08060 PF02386 Cation transport protein KAR29_08065 PF00453 Ribosomal protein L20 KAR29_08070 PF01632 Ribosomal protein L35 KAR29_08075 PF00707 Translation initiation factor IF-3, C-terminal domain KAR29_08075 PF05198 Translation initiation factor IF-3, N-terminal domain KAR29_08080 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KAR29_08080 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KAR29_08080 PF02824 TGS domain KAR29_08080 PF03129 Anticodon binding domain KAR29_08085 PF00209 Sodium:neurotransmitter symporter family KAR29_08090 PF00692 dUTPase KAR29_08095 PF00013 KH domain KAR29_08095 PF01138 3' exoribonuclease family, domain 1 KAR29_08095 PF00575 S1 RNA binding domain KAR29_08095 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain KAR29_08095 PF03725 3' exoribonuclease family, domain 2 KAR29_08100 PF00312 Ribosomal protein S15 KAR29_08105 PF00072 Response regulator receiver domain KAR29_08105 PF00486 Transcriptional regulatory protein, C terminal KAR29_08110 PF00672 HAMP domain KAR29_08110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAR29_08110 PF00512 His Kinase A (phospho-acceptor) domain KAR29_08115 PF17820 PDZ domain KAR29_08115 PF13180 PDZ domain KAR29_08125 PF00474 Sodium:solute symporter family KAR29_08130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAR29_08130 PF00989 PAS fold KAR29_08130 PF00512 His Kinase A (phospho-acceptor) domain KAR29_08135 PF00072 Response regulator receiver domain KAR29_08135 PF00158 Sigma-54 interaction domain KAR29_08135 PF02954 Bacterial regulatory protein, Fis family KAR29_08140 PF00309 Sigma-54 factor, Activator interacting domain (AID) KAR29_08140 PF04963 Sigma-54 factor, core binding domain KAR29_08140 PF04552 Sigma-54, DNA binding domain KAR29_08150 PF01566 Natural resistance-associated macrophage protein KAR29_08155 PF02682 Carboxyltransferase domain, subdomain C and D KAR29_08160 PF02626 Carboxyltransferase domain, subdomain A and B KAR29_08165 PF03746 LamB/YcsF family KAR29_08170 PF07286 Protein of unknown function (DUF1445) KAR29_08175 PF04463 Protein of unknown function (DUF523) KAR29_08190 PF01926 50S ribosome-binding GTPase KAR29_08190 PF12631 MnmE helical domain KAR29_08190 PF10396 GTP-binding protein TrmE N-terminus KAR29_08195 PF10415 Fumarase C C-terminus KAR29_08195 PF00206 Lyase KAR29_08200 PF00486 Transcriptional regulatory protein, C terminal KAR29_08200 PF00072 Response regulator receiver domain KAR29_08205 PF00072 Response regulator receiver domain KAR29_08205 PF00512 His Kinase A (phospho-acceptor) domain KAR29_08205 PF01627 Hpt domain KAR29_08205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAR29_08215 PF00689 Cation transporting ATPase, C-terminus KAR29_08215 PF00690 Cation transporter/ATPase, N-terminus KAR29_08225 PF01180 Dihydroorotate dehydrogenase KAR29_08240 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system KAR29_08250 PF01668 SmpB protein KAR29_08260 PF13247 4Fe-4S dicluster domain KAR29_08280 PF00857 Isochorismatase family KAR29_08290 PF00390 Malic enzyme, N-terminal domain KAR29_08290 PF03949 Malic enzyme, NAD binding domain KAR29_08315 PF07196 Flagellin hook IN motif KAR29_08315 PF02465 Flagellar hook-associated protein 2 N-terminus KAR29_08315 PF07195 Flagellar hook-associated protein 2 C-terminus KAR29_08320 PF00196 Bacterial regulatory proteins, luxR family KAR29_08320 PF00072 Response regulator receiver domain KAR29_08325 PF01171 PP-loop family KAR29_08340 PF01458 Uncharacterized protein family (UPF0051) KAR29_08345 PF00005 ABC transporter KAR29_08350 PF00342 Phosphoglucose isomerase KAR29_08355 PF00175 Oxidoreductase NAD-binding domain KAR29_08355 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B KAR29_08355 PF00970 Oxidoreductase FAD-binding domain KAR29_08360 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAR29_08360 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster KAR29_08370 PF03976 Polyphosphate kinase 2 (PPK2) KAR29_08375 PF00009 Elongation factor Tu GTP binding domain KAR29_08375 PF03144 Elongation factor Tu domain 2 KAR29_08375 PF16658 Class II release factor RF3, C-terminal domain KAR29_08380 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KAR29_08380 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KAR29_08385 PF00596 Class II Aldolase and Adducin N-terminal domain KAR29_08390 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component KAR29_08390 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component KAR29_08400 PF03480 Bacterial extracellular solute-binding protein, family 7 KAR29_08405 PF00392 Bacterial regulatory proteins, gntR family KAR29_08405 PF07729 FCD domain KAR29_08415 PF01791 DeoC/LacD family aldolase KAR29_08435 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KAR29_08435 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KAR29_08440 PF11842 Domain of unknown function (DUF3362) KAR29_08440 PF04055 Radical SAM superfamily KAR29_08440 PF08497 Radical SAM N-terminal KAR29_08445 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KAR29_08445 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KAR29_08460 PF02803 Thiolase, C-terminal domain KAR29_08460 PF00108 Thiolase, N-terminal domain KAR29_08465 PF01144 Coenzyme A transferase KAR29_08470 PF01144 Coenzyme A transferase KAR29_08480 PF16868 NMT1-like family KAR29_08485 PF00202 Aminotransferase class-III KAR29_08490 PF01380 SIS domain KAR29_08490 PF01418 Helix-turn-helix domain, rpiR family KAR29_08500 PF00392 Bacterial regulatory proteins, gntR family KAR29_08500 PF07729 FCD domain KAR29_08505 PF00557 Metallopeptidase family M24 KAR29_08505 PF01321 Creatinase/Prolidase N-terminal domain KAR29_08510 PF01339 CheB methylesterase KAR29_08510 PF00072 Response regulator receiver domain KAR29_08535 PF01169 Uncharacterized protein family UPF0016 KAR29_08540 PF01594 AI-2E family transporter KAR29_08560 PF01790 Prolipoprotein diacylglyceryl transferase KAR29_08565 PF14804 Jag N-terminus KAR29_08565 PF01424 R3H domain KAR29_08570 PF02096 60Kd inner membrane protein KAR29_08570 PF14849 YidC periplasmic domain KAR29_08575 PF01809 Putative membrane protein insertion efficiency factor KAR29_08580 PF00825 Ribonuclease P KAR29_08585 PF00468 Ribosomal protein L34 KAR29_08595 PF13307 Helicase C-terminal domain KAR29_08595 PF04851 Type III restriction enzyme, res subunit KAR29_08600 PF01649 Ribosomal protein S20 KAR29_08610 PF08264 Anticodon-binding domain of tRNA KAR29_08610 PF09334 tRNA synthetases class I (M) KAR29_08610 PF13603 Leucyl-tRNA synthetase, Domain 2 KAR29_08610 PF00133 tRNA synthetases class I (I, L, M and V) KAR29_08615 PF01145 SPFH domain / Band 7 family KAR29_08615 PF16200 C-terminal region of band_7 KAR29_08625 PF18073 Rubredoxin metal binding domain KAR29_08630 PF13393 Histidyl-tRNA synthetase KAR29_08635 PF01634 ATP phosphoribosyltransferase KAR29_08640 PF00475 Imidazoleglycerol-phosphate dehydratase KAR29_08645 PF00117 Glutamine amidotransferase class-I KAR29_08650 PF00977 Histidine biosynthesis protein KAR29_08655 PF00977 Histidine biosynthesis protein KAR29_08660 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase KAR29_08660 PF01502 Phosphoribosyl-AMP cyclohydrolase KAR29_08665 PF03466 LysR substrate binding domain KAR29_08665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAR29_08670 PF03606 C4-dicarboxylate anaerobic carrier KAR29_08680 PF02811 PHP domain KAR29_08720 PF12683 Protein of unknown function (DUF3798) KAR29_08730 PF13458 Periplasmic binding protein KAR29_08735 PF02653 Branched-chain amino acid transport system / permease component KAR29_08740 PF11862 Domain of unknown function (DUF3382) KAR29_08740 PF02653 Branched-chain amino acid transport system / permease component KAR29_08745 PF12399 Branched-chain amino acid ATP-binding cassette transporter KAR29_08745 PF00005 ABC transporter KAR29_08750 PF00005 ABC transporter KAR29_08775 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KAR29_08785 PF04754 Putative transposase, YhgA-like KAR29_08795 PF04754 Putative transposase, YhgA-like KAR29_08805 PF04754 Putative transposase, YhgA-like KAR29_08810 PF01370 NAD dependent epimerase/dehydratase family KAR29_08810 PF02911 Formyl transferase, C-terminal domain KAR29_08810 PF00551 Formyl transferase KAR29_08815 PF08666 SAF domain KAR29_08815 PF03102 NeuB family KAR29_08820 PF02719 Polysaccharide biosynthesis protein KAR29_08825 PF02348 Cytidylyltransferase KAR29_08835 PF00700 Bacterial flagellin C-terminal helical region KAR29_08850 PF02599 Global regulator protein family KAR29_08855 PF02623 FliW protein KAR29_08860 PF00669 Bacterial flagellin N-terminal helical region KAR29_08860 PF00700 Bacterial flagellin C-terminal helical region KAR29_08865 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KAR29_08865 PF07196 Flagellin hook IN motif KAR29_08865 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KAR29_08865 PF07196 Flagellin hook IN motif KAR29_08885 PF00156 Phosphoribosyl transferase domain KAR29_08890 PF02773 S-adenosylmethionine synthetase, C-terminal domain KAR29_08890 PF02772 S-adenosylmethionine synthetase, central domain KAR29_08890 PF00438 S-adenosylmethionine synthetase, N-terminal domain KAR29_08895 PF00583 Acetyltransferase (GNAT) family KAR29_08905 PF11283 Protein of unknown function (DUF3084) KAR29_08910 PF00202 Aminotransferase class-III KAR29_08930 PF02119 Flagellar P-ring protein KAR29_08935 PF02107 Flagellar L-ring protein KAR29_08945 PF00460 Flagella basal body rod protein KAR29_08945 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KAR29_08950 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KAR29_08950 PF00460 Flagella basal body rod protein KAR29_08960 PF01416 tRNA pseudouridine synthase KAR29_08965 PF02361 Cobalt transport protein KAR29_08970 PF00005 ABC transporter KAR29_08975 PF00005 ABC transporter KAR29_08980 PF01196 Ribosomal protein L17 KAR29_08985 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain KAR29_08985 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain KAR29_08985 PF01000 RNA polymerase Rpb3/RpoA insert domain KAR29_08990 PF01479 S4 domain KAR29_08990 PF00163 Ribosomal protein S4/S9 N-terminal domain KAR29_08995 PF00411 Ribosomal protein S11 KAR29_09000 PF00416 Ribosomal protein S13/S18 KAR29_09005 PF00444 Ribosomal protein L36 KAR29_09010 PF01176 Translation initiation factor 1A / IF-1 KAR29_09015 PF00557 Metallopeptidase family M24 KAR29_09020 PF05191 Adenylate kinase, active site lid KAR29_09025 PF00344 SecY translocase KAR29_09030 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A KAR29_09035 PF00327 Ribosomal protein L30p/L7e KAR29_09040 PF00333 Ribosomal protein S5, N-terminal domain KAR29_09040 PF03719 Ribosomal protein S5, C-terminal domain KAR29_09045 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast KAR29_09050 PF00347 Ribosomal protein L6 KAR29_09055 PF00410 Ribosomal protein S8 KAR29_09060 PF00253 Ribosomal protein S14p/S29e KAR29_09065 PF00281 Ribosomal protein L5 KAR29_09065 PF00673 ribosomal L5P family C-terminus KAR29_09070 PF00467 KOW motif KAR29_09070 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 KAR29_09075 PF00238 Ribosomal protein L14p/L23e KAR29_09080 PF00366 Ribosomal protein S17 KAR29_09085 PF00831 Ribosomal L29 protein KAR29_09090 PF00252 Ribosomal protein L16p/L10e KAR29_09095 PF07650 KH domain KAR29_09095 PF00189 Ribosomal protein S3, C-terminal domain KAR29_09100 PF00237 Ribosomal protein L22p/L17e KAR29_09105 PF00203 Ribosomal protein S19 KAR29_09110 PF00181 Ribosomal Proteins L2, RNA binding domain KAR29_09110 PF03947 Ribosomal Proteins L2, C-terminal domain KAR29_09115 PF00276 Ribosomal protein L23 KAR29_09120 PF00573 Ribosomal protein L4/L1 family KAR29_09125 PF00297 Ribosomal protein L3 KAR29_09130 PF00338 Ribosomal protein S10p/S20e KAR29_09135 PF03144 Elongation factor Tu domain 2 KAR29_09135 PF03143 Elongation factor Tu C-terminal domain KAR29_09135 PF00009 Elongation factor Tu GTP binding domain KAR29_09140 PF03144 Elongation factor Tu domain 2 KAR29_09140 PF00679 Elongation factor G C-terminus KAR29_09140 PF14492 Elongation Factor G, domain II KAR29_09140 PF03764 Elongation factor G, domain IV KAR29_09140 PF00009 Elongation factor Tu GTP binding domain KAR29_09145 PF00177 Ribosomal protein S7p/S5e KAR29_09150 PF00164 Ribosomal protein S12/S23 KAR29_09155 PF04998 RNA polymerase Rpb1, domain 5 KAR29_09155 PF00623 RNA polymerase Rpb1, domain 2 KAR29_09155 PF04997 RNA polymerase Rpb1, domain 1 KAR29_09155 PF04998 RNA polymerase Rpb1, domain 5 KAR29_09155 PF05000 RNA polymerase Rpb1, domain 4 KAR29_09155 PF04983 RNA polymerase Rpb1, domain 3 KAR29_09155 PF00623 RNA polymerase Rpb1, domain 2 KAR29_09155 PF05000 RNA polymerase Rpb1, domain 4 KAR29_09155 PF04983 RNA polymerase Rpb1, domain 3 KAR29_09155 PF04997 RNA polymerase Rpb1, domain 1 KAR29_09160 PF04563 RNA polymerase beta subunit KAR29_09160 PF04565 RNA polymerase Rpb2, domain 3 KAR29_09160 PF10385 RNA polymerase beta subunit external 1 domain KAR29_09160 PF00562 RNA polymerase Rpb2, domain 6 KAR29_09160 PF04560 RNA polymerase Rpb2, domain 7 KAR29_09160 PF04561 RNA polymerase Rpb2, domain 2 KAR29_09180 PF03481 Putative GTP-binding controlling metal-binding KAR29_09180 PF01300 Telomere recombination KAR29_09185 PF01702 Queuine tRNA-ribosyltransferase KAR29_09190 PF01026 TatD related DNase KAR29_09195 PF08264 Anticodon-binding domain of tRNA KAR29_09195 PF09334 tRNA synthetases class I (M) KAR29_09195 PF01588 Putative tRNA binding domain KAR29_09200 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KAR29_09205 PF00183 Hsp90 protein KAR29_09215 PF13614 AAA domain KAR29_09225 PF02463 RecF/RecN/SMC N terminal domain KAR29_09225 PF06470 SMC proteins Flexible Hinge Domain KAR29_09230 PF10150 Ribonuclease E/G family KAR29_09230 PF00575 S1 RNA binding domain KAR29_09245 PF01098 Cell cycle protein KAR29_09250 PF03776 Septum formation topological specificity factor MinE KAR29_09255 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KAR29_09260 PF03775 Septum formation inhibitor MinC, C-terminal domain KAR29_09265 PF03717 Penicillin-binding Protein dimerisation domain KAR29_09265 PF00905 Penicillin binding protein transpeptidase domain KAR29_09285 PF04002 RadC-like JAB domain KAR29_09290 PF00753 Metallo-beta-lactamase superfamily KAR29_09295 PF02580 D-Tyr-tRNA(Tyr) deacylase KAR29_09300 PF04607 Region found in RelA / SpoT proteins KAR29_09300 PF13291 ACT domain KAR29_09300 PF02824 TGS domain KAR29_09305 PF01368 DHH family KAR29_09305 PF02272 DHHA1 domain KAR29_09305 PF17768 RecJ OB domain KAR29_09305 PF10141 Single-strand DNA-specific exonuclease, C terminal domain KAR29_09320 PF07549 SecD/SecF GG Motif KAR29_09320 PF02355 Protein export membrane protein KAR29_09325 PF07549 SecD/SecF GG Motif KAR29_09325 PF02355 Protein export membrane protein KAR29_09330 PF02699 Preprotein translocase subunit KAR29_09335 PF02629 CoA binding domain KAR29_09335 PF06971 Putative DNA-binding protein N-terminus KAR29_09340 PF00113 Enolase, C-terminal TIM barrel domain KAR29_09340 PF03952 Enolase, N-terminal domain KAR29_09345 PF01479 S4 domain KAR29_09355 PF03979 Sigma-70 factor, region 1.1 KAR29_09355 PF00140 Sigma-70 factor, region 1.2 KAR29_09355 PF04542 Sigma-70 region 2 KAR29_09355 PF04539 Sigma-70 region 3 KAR29_09355 PF04545 Sigma-70, region 4 KAR29_09360 PF10410 DnaB-helicase binding domain of primase KAR29_09360 PF08275 DNA primase catalytic core, N-terminal domain KAR29_09360 PF01807 CHC2 zinc finger KAR29_09365 PF03030 Inorganic H+ pyrophosphatase KAR29_09375 PF01594 AI-2E family transporter KAR29_09395 PF00958 GMP synthase C terminal domain KAR29_09395 PF00117 Glutamine amidotransferase class-I KAR29_09400 PF00118 TCP-1/cpn60 chaperonin family KAR29_09405 PF00166 Chaperonin 10 Kd subunit KAR29_09410 PF00814 Glycoprotease family KAR29_09420 PF01430 Hsp33 protein KAR29_09425 PF03023 Lipid II flippase MurJ KAR29_09435 PF00005 ABC transporter KAR29_09445 PF01118 Semialdehyde dehydrogenase, NAD binding domain KAR29_09445 PF02774 Semialdehyde dehydrogenase, dimerisation domain KAR29_09450 PF00696 Amino acid kinase family KAR29_09450 PF01842 ACT domain KAR29_09450 PF13840 ACT domain KAR29_09455 PF00288 GHMP kinases N terminal domain KAR29_09455 PF08544 GHMP kinases C terminal KAR29_09460 PF00291 Pyridoxal-phosphate dependent enzyme KAR29_09465 PF01272 Transcription elongation factor, GreA/GreB, C-term KAR29_09465 PF03449 Transcription elongation factor, N-terminal KAR29_09470 PF07478 D-ala D-ala ligase C-terminus KAR29_09470 PF01820 D-ala D-ala ligase N-terminus KAR29_09500 PF06418 CTP synthase N-terminus KAR29_09500 PF00117 Glutamine amidotransferase class-I KAR29_09505 PF01476 LysM domain KAR29_09505 PF08525 Opacity-associated protein A N-terminal motif KAR29_09505 PF01551 Peptidase family M23 KAR29_09510 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KAR29_09510 PF07498 Rho termination factor, N-terminal domain KAR29_09510 PF07497 Rho termination factor, RNA-binding domain KAR29_09515 PF00923 Transaldolase/Fructose-6-phosphate aldolase KAR29_09535 PF00365 Phosphofructokinase KAR29_09540 PF00004 ATPase family associated with various cellular activities (AAA) KAR29_09540 PF16193 AAA C-terminal domain KAR29_09540 PF12002 MgsA AAA+ ATPase C terminal KAR29_09545 PF13419 Haloacid dehalogenase-like hydrolase KAR29_09555 PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system KAR29_09565 PF02350 UDP-N-acetylglucosamine 2-epimerase KAR29_09570 PF00497 Bacterial extracellular solute-binding proteins, family 3 KAR29_09570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAR29_09570 PF00512 His Kinase A (phospho-acceptor) domain KAR29_09585 PF11897 Protein of unknown function (DUF3417) KAR29_09585 PF00343 Carbohydrate phosphorylase KAR29_09590 PF08323 Starch synthase catalytic domain KAR29_09590 PF00534 Glycosyl transferases group 1 KAR29_09595 PF00483 Nucleotidyl transferase KAR29_09610 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KAR29_09615 PF00465 Iron-containing alcohol dehydrogenase KAR29_09620 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) KAR29_09625 PF01380 SIS domain KAR29_09625 PF00571 CBS domain KAR29_09630 PF00793 DAHP synthetase I family KAR29_09635 PF02348 Cytidylyltransferase KAR29_09640 PF02606 Tetraacyldisaccharide-1-P 4'-kinase KAR29_09645 PF00664 ABC transporter transmembrane region KAR29_09645 PF00005 ABC transporter KAR29_09650 PF02684 Lipid-A-disaccharide synthetase KAR29_09655 PF02684 Lipid-A-disaccharide synthetase KAR29_09675 PF00132 Bacterial transferase hexapeptide (six repeats) KAR29_09675 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 KAR29_09680 PF07977 FabA-like domain KAR29_09685 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase KAR29_09690 PF00132 Bacterial transferase hexapeptide (six repeats) KAR29_09690 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD KAR29_09700 PF01103 Surface antigen KAR29_09700 PF07244 Surface antigen variable number repeat KAR29_09710 PF00140 Sigma-70 factor, region 1.2 KAR29_09710 PF04542 Sigma-70 region 2 KAR29_09710 PF04539 Sigma-70 region 3 KAR29_09710 PF04545 Sigma-70, region 4 KAR29_09715 PF00300 Histidine phosphatase superfamily (branch 1) KAR29_09735 PF00206 Lyase KAR29_09735 PF14698 Argininosuccinate lyase C-terminal KAR29_09740 PF02541 Ppx/GppA phosphatase family KAR29_09750 PF01138 3' exoribonuclease family, domain 1 KAR29_09750 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain KAR29_09750 PF00013 KH domain KAR29_09750 PF00575 S1 RNA binding domain KAR29_09750 PF03725 3' exoribonuclease family, domain 2 KAR29_09775 PF04545 Sigma-70, region 4 KAR29_09775 PF04542 Sigma-70 region 2 KAR29_09775 PF04539 Sigma-70 region 3 KAR29_09785 PF03975 CheD chemotactic sensory transduction KAR29_09790 PF04509 CheC-like family KAR29_09795 PF01584 CheW-like domain KAR29_09795 PF02895 Signal transducing histidine kinase, homodimeric domain KAR29_09795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAR29_09795 PF01627 Hpt domain KAR29_09795 PF07194 P2 response regulator binding domain KAR29_09800 PF01339 CheB methylesterase KAR29_09800 PF00072 Response regulator receiver domain KAR29_09810 PF10609 NUBPL iron-transfer P-loop NTPase KAR29_09815 PF00448 SRP54-type protein, GTPase domain KAR29_09820 PF00771 FHIPEP family KAR29_09825 PF01312 FlhB HrpN YscU SpaS Family KAR29_09830 PF01311 Bacterial export proteins, family 1 KAR29_09835 PF01313 Bacterial export proteins, family 3 KAR29_09840 PF00813 FliP family KAR29_09850 PF00072 Response regulator receiver domain KAR29_09855 PF04509 CheC-like family KAR29_09855 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KAR29_09860 PF02154 Flagellar motor switch protein FliM KAR29_09860 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KAR29_09870 PF13677 Membrane MotB of proton-channel complex MotA/MotB KAR29_09870 PF00691 OmpA family KAR29_09875 PF01618 MotA/TolQ/ExbB proton channel family KAR29_09880 PF07559 Flagellar basal body protein FlaE KAR29_09880 PF00460 Flagella basal body rod protein KAR29_09880 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KAR29_09880 PF07559 Flagellar basal body protein FlaE KAR29_09880 PF00460 Flagella basal body rod protein KAR29_09880 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KAR29_09905 PF01464 Transglycosylase SLT domain KAR29_09915 PF18269 T3SS EscN ATPase C-terminal domain KAR29_09915 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KAR29_09915 PF02874 ATP synthase alpha/beta family, beta-barrel domain KAR29_09925 PF14842 FliG N-terminal domain KAR29_09925 PF01706 FliG C-terminal domain KAR29_09925 PF14841 FliG middle domain KAR29_09930 PF01514 Secretory protein of YscJ/FliF family KAR29_09930 PF08345 Flagellar M-ring protein C-terminal KAR29_09935 PF02049 Flagellar hook-basal body complex protein FliE KAR29_09940 PF00460 Flagella basal body rod protein KAR29_09940 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KAR29_09950 PF08222 CodY helix-turn-helix domain KAR29_09950 PF06018 CodY GAF-like domain KAR29_09955 PF00004 ATPase family associated with various cellular activities (AAA) KAR29_09955 PF07724 AAA domain (Cdc48 subfamily) KAR29_09955 PF10431 C-terminal, D2-small domain, of ClpB protein KAR29_09960 PF00227 Proteasome subunit KAR29_09965 PF02899 Phage integrase, N-terminal SAM-like domain KAR29_09965 PF00589 Phage integrase family KAR29_09970 PF01134 Glucose inhibited division protein A KAR29_09975 PF01396 Topoisomerase DNA binding C4 zinc finger KAR29_09975 PF01131 DNA topoisomerase KAR29_09975 PF01751 Toprim domain KAR29_09985 PF02481 DNA recombination-mediator protein A KAR29_09985 PF17782 DprA winged helix domain KAR29_09990 PF01078 Magnesium chelatase, subunit ChlI KAR29_09990 PF13335 Magnesium chelatase, subunit ChlI C-terminal KAR29_09995 PF02021 Uncharacterised protein family UPF0102 KAR29_10000 PF01312 FlhB HrpN YscU SpaS Family KAR29_10010 PF01351 Ribonuclease HII KAR29_10015 PF01926 50S ribosome-binding GTPase KAR29_10020 PF10502 Signal peptidase, peptidase S26 KAR29_10040 PF03061 Thioesterase superfamily KAR29_10060 PF00005 ABC transporter KAR29_10060 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KAR29_10075 PF00528 Binding-protein-dependent transport system inner membrane component KAR29_10075 PF12911 N-terminal TM domain of oligopeptide transport permease C KAR29_10080 PF00528 Binding-protein-dependent transport system inner membrane component KAR29_10085 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KAR29_10095 PF01969 Protein of unknown function DUF111 KAR29_10105 PF01969 Protein of unknown function DUF111 KAR29_10110 PF00731 AIR carboxylase KAR29_10115 PF00809 Pterin binding enzyme KAR29_10125 PF08443 RimK-like ATP-grasp domain KAR29_10125 PF18030 RimK PreATP-grasp domain KAR29_10130 PF02289 Cyclohydrolase (MCH) KAR29_10140 PF01913 Formylmethanofuran-tetrahydromethanopterin formyltransferase KAR29_10140 PF02741 FTR, proximal lobe KAR29_10165 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KAR29_10165 PF02152 Dihydroneopterin aldolase KAR29_10190 PF09176 Methylene-tetrahydromethanopterin dehydrogenase, N-terminal KAR29_10200 PF13520 Amino acid permease KAR29_10205 PF00881 Nitroreductase family KAR29_10210 PF10371 Domain of unknown function KAR29_10210 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg KAR29_10210 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase KAR29_10210 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KAR29_10210 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II KAR29_10215 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KAR29_10215 PF02874 ATP synthase alpha/beta family, beta-barrel domain KAR29_10220 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KAR29_10220 PF02874 ATP synthase alpha/beta family, beta-barrel domain KAR29_10220 PF16886 ATPsynthase alpha/beta subunit N-term extension KAR29_10255 PF01813 ATP synthase subunit D KAR29_10260 PF00892 EamA-like transporter family KAR29_10265 PF01996 F420-0:Gamma-glutamyl ligase KAR29_10265 PF00881 Nitroreductase family KAR29_10280 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KAR29_10295 PF00994 Probable molybdopterin binding domain KAR29_10295 PF03454 MoeA C-terminal region (domain IV) KAR29_10295 PF03453 MoeA N-terminal region (domain I and II) KAR29_10310 PF08241 Methyltransferase domain KAR29_10320 PF01497 Periplasmic binding protein KAR29_10325 PF00005 ABC transporter KAR29_10330 PF01032 FecCD transport family KAR29_10345 PF01799 [2Fe-2S] binding domain KAR29_10345 PF00111 2Fe-2S iron-sulfur cluster binding domain KAR29_10360 PF01245 Ribosomal protein L19 KAR29_10365 PF01746 tRNA (Guanine-1)-methyltransferase KAR29_10370 PF05239 PRC-barrel domain KAR29_10370 PF01782 RimM N-terminal domain KAR29_10380 PF00886 Ribosomal protein S16 KAR29_10385 PF00448 SRP54-type protein, GTPase domain KAR29_10385 PF02881 SRP54-type protein, helical bundle domain KAR29_10385 PF02978 Signal peptide binding domain KAR29_10390 PF04297 Putative helix-turn-helix protein, YlxM / p13 like KAR29_10405 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KAR29_10410 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KAR29_10420 PF00893 Small Multidrug Resistance protein KAR29_10425 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase KAR29_10430 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KAR29_10435 PF00535 Glycosyl transferase family 2 KAR29_10440 PF01370 NAD dependent epimerase/dehydratase family KAR29_10440 PF02911 Formyl transferase, C-terminal domain KAR29_10440 PF00551 Formyl transferase KAR29_10445 PF02911 Formyl transferase, C-terminal domain KAR29_10445 PF01370 NAD dependent epimerase/dehydratase family KAR29_10445 PF00551 Formyl transferase KAR29_10450 PF01522 Polysaccharide deacetylase KAR29_10465 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KAR29_10465 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KAR29_10465 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KAR29_10470 PF12706 Beta-lactamase superfamily domain KAR29_10475 PF00152 tRNA synthetases class II (D, K and N) KAR29_10475 PF01336 OB-fold nucleic acid binding domain KAR29_10475 PF02938 GAD domain KAR29_10480 PF13393 Histidyl-tRNA synthetase KAR29_10480 PF03129 Anticodon binding domain KAR29_10485 PF04232 Stage V sporulation protein S (SpoVS) KAR29_10495 PF06865 Pyrimidine/purine nucleoside phosphorylase KAR29_10500 PF03734 L,D-transpeptidase catalytic domain KAR29_10505 PF00005 ABC transporter KAR29_10510 PF00528 Binding-protein-dependent transport system inner membrane component KAR29_10520 PF05544 Proline racemase KAR29_10535 PF04324 BFD-like [2Fe-2S] binding domain KAR29_10535 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAR29_10545 PF01266 FAD dependent oxidoreductase KAR29_10565 PF00005 ABC transporter KAR29_10570 PF12683 Protein of unknown function (DUF3798) KAR29_10575 PF02142 MGS-like domain KAR29_10580 PF00892 EamA-like transporter family KAR29_10595 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) KAR29_10600 PF03334 Na+/H+ antiporter subunit KAR29_10605 PF13244 Domain of unknown function (DUF4040) KAR29_10605 PF00361 Proton-conducting membrane transporter KAR29_10605 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KAR29_10615 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KAR29_10620 PF00361 Proton-conducting membrane transporter KAR29_10630 PF00361 Proton-conducting membrane transporter KAR29_10635 PF01145 SPFH domain / Band 7 family KAR29_10635 PF16200 C-terminal region of band_7 KAR29_10650 PF00245 Alkaline phosphatase KAR29_10655 PF01220 Dehydroquinase class II KAR29_10660 PF01761 3-dehydroquinate synthase KAR29_10665 PF01264 Chorismate synthase KAR29_10670 PF08501 Shikimate dehydrogenase substrate binding domain KAR29_10670 PF01488 Shikimate / quinate 5-dehydrogenase KAR29_10670 PF18317 Shikimate 5'-dehydrogenase C-terminal domain KAR29_10675 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KAR29_10680 PF02153 Prephenate dehydrogenase KAR29_10685 PF18152 DAHP synthase ferredoxin-like domain KAR29_10685 PF00793 DAHP synthetase I family KAR29_10695 PF02378 Phosphotransferase system, EIIC KAR29_10710 PF01381 Helix-turn-helix KAR29_10715 PF00999 Sodium/hydrogen exchanger family KAR29_10715 PF02254 TrkA-N domain KAR29_10725 PF01842 ACT domain KAR29_10725 PF01817 Chorismate mutase type II KAR29_10725 PF00800 Prephenate dehydratase KAR29_10730 PF00290 Tryptophan synthase alpha chain KAR29_10735 PF00291 Pyridoxal-phosphate dependent enzyme KAR29_10740 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase KAR29_10745 PF00218 Indole-3-glycerol phosphate synthase KAR29_10750 PF00591 Glycosyl transferase family, a/b domain KAR29_10750 PF02885 Glycosyl transferase family, helical bundle domain KAR29_10755 PF00117 Glutamine amidotransferase class-I KAR29_10755 PF02885 Glycosyl transferase family, helical bundle domain KAR29_10755 PF00591 Glycosyl transferase family, a/b domain KAR29_10760 PF04715 Anthranilate synthase component I, N terminal region KAR29_10760 PF00425 chorismate binding enzyme KAR29_10765 PF00291 Pyridoxal-phosphate dependent enzyme KAR29_10775 PF03591 AzlC protein KAR29_10790 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain KAR29_10790 PF06165 Glycosyltransferase family 36 KAR29_10790 PF10091 Putative glucoamylase KAR29_10845 PF00271 Helicase conserved C-terminal domain KAR29_10845 PF09369 Domain of unknown function (DUF1998) KAR29_10845 PF00270 DEAD/DEAH box helicase KAR29_10850 PF00271 Helicase conserved C-terminal domain KAR29_10850 PF12137 RNA polymerase recycling family C-terminal KAR29_10850 PF00176 SNF2 family N-terminal domain KAR29_10850 PF18339 RapA N-terminal Tudor like domain 1 KAR29_10850 PF18337 RapA N-terminal Tudor like domain KAR29_10860 PF02163 Peptidase family M50 KAR29_10860 PF17820 PDZ domain KAR29_10870 PF00324 Amino acid permease KAR29_10875 PF00815 Histidinol dehydrogenase KAR29_10880 PF09084 NMT1/THI5 like KAR29_10885 PF03616 Sodium/glutamate symporter KAR29_10900 PF00156 Phosphoribosyl transferase domain KAR29_10920 PF00570 HRDC domain KAR29_10920 PF00271 Helicase conserved C-terminal domain KAR29_10920 PF00270 DEAD/DEAH box helicase KAR29_10920 PF16124 RecQ zinc-binding KAR29_10920 PF09382 RQC domain KAR29_10925 PF01235 Sodium:alanine symporter family KAR29_10935 PF01522 Polysaccharide deacetylase KAR29_10945 PF00392 Bacterial regulatory proteins, gntR family KAR29_10945 PF07729 FCD domain KAR29_10955 PF02310 B12 binding domain KAR29_10955 PF01642 Methylmalonyl-CoA mutase KAR29_10960 PF02310 B12 binding domain KAR29_10960 PF01642 Methylmalonyl-CoA mutase KAR29_10980 PF04754 Putative transposase, YhgA-like KAR29_10985 PF04754 Putative transposase, YhgA-like KAR29_11000 PF03553 Na+/H+ antiporter family KAR29_11005 PF00009 Elongation factor Tu GTP binding domain KAR29_11005 PF11987 Translation-initiation factor 2 KAR29_11005 PF04760 Translation initiation factor IF-2, N-terminal region KAR29_11015 PF13520 Amino acid permease KAR29_11020 PF07969 Amidohydrolase family KAR29_11025 PF00465 Iron-containing alcohol dehydrogenase KAR29_11065 PF12704 MacB-like periplasmic core domain KAR29_11065 PF02687 FtsX-like permease family KAR29_11065 PF00005 ABC transporter KAR29_11070 PF00563 EAL domain KAR29_11070 PF08448 PAS fold KAR29_11070 PF00990 Diguanylate cyclase, GGDEF domain KAR29_11070 PF08447 PAS fold KAR29_11075 PF01695 IstB-like ATP binding protein KAR29_11085 PF01554 MatE KAR29_11095 PF01037 Lrp/AsnC ligand binding domain KAR29_11100 PF16653 Saccharopine dehydrogenase C-terminal domain KAR29_11100 PF03435 Saccharopine dehydrogenase NADP binding domain KAR29_11105 PF07729 FCD domain KAR29_11105 PF00392 Bacterial regulatory proteins, gntR family KAR29_11140 PF00005 ABC transporter KAR29_11145 PF00005 ABC transporter KAR29_11145 PF12399 Branched-chain amino acid ATP-binding cassette transporter KAR29_11150 PF11862 Domain of unknown function (DUF3382) KAR29_11150 PF02653 Branched-chain amino acid transport system / permease component KAR29_11155 PF02653 Branched-chain amino acid transport system / permease component KAR29_11160 PF13458 Periplasmic binding protein KAR29_11165 PF00155 Aminotransferase class I and II KAR29_11175 PF01081 KDPG and KHG aldolase KAR29_11180 PF01614 Bacterial transcriptional regulator KAR29_11180 PF09339 IclR helix-turn-helix domain KAR29_11200 PF13520 Amino acid permease KAR29_11210 PF00202 Aminotransferase class-III KAR29_11220 PF01381 Helix-turn-helix KAR29_11235 PF16363 GDP-mannose 4,6 dehydratase KAR29_11240 PF05523 WxcM-like, C-terminal KAR29_11245 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KAR29_11250 PF00483 Nucleotidyl transferase KAR29_11280 PF00534 Glycosyl transferases group 1 KAR29_11280 PF13439 Glycosyltransferase Family 4 KAR29_11310 PF13276 HTH-like domain KAR29_11310 PF00665 Integrase core domain KAR29_11325 PF01695 IstB-like ATP binding protein KAR29_11335 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KAR29_11335 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KAR29_11335 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KAR29_11345 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KAR29_11355 PF02397 Bacterial sugar transferase KAR29_11365 PF02463 RecF/RecN/SMC N terminal domain KAR29_11385 PF02397 Bacterial sugar transferase KAR29_11420 PF02719 Polysaccharide biosynthesis protein KAR29_11440 PF06082 Exopolysaccharide biosynthesis protein YbjH KAR29_11445 PF13476 AAA domain KAR29_11455 PF00082 Subtilase family KAR29_11460 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component KAR29_11485 PF03600 Citrate transporter KAR29_11495 PF01032 FecCD transport family KAR29_11500 PF00005 ABC transporter KAR29_11505 PF01370 NAD dependent epimerase/dehydratase family KAR29_11510 PF02421 Ferrous iron transport protein B KAR29_11510 PF04023 FeoA domain KAR29_11510 PF07664 Ferrous iron transport protein B C terminus KAR29_11510 PF17910 FeoB cytosolic helical domain KAR29_11510 PF07670 Nucleoside recognition KAR29_11525 PF00072 Response regulator receiver domain KAR29_11535 PF00005 ABC transporter KAR29_11535 PF08402 TOBE domain KAR29_11540 PF00528 Binding-protein-dependent transport system inner membrane component KAR29_11545 PF00005 ABC transporter KAR29_11550 PF00528 Binding-protein-dependent transport system inner membrane component KAR29_11555 PF12849 PBP superfamily domain KAR29_11560 PF12849 PBP superfamily domain KAR29_11565 PF00696 Amino acid kinase family KAR29_11580 PF00171 Aldehyde dehydrogenase family KAR29_11585 PF00462 Glutaredoxin KAR29_11590 PF00535 Glycosyl transferase family 2 KAR29_11600 PF04349 Periplasmic glucan biosynthesis protein, MdoG KAR29_11615 PF12419 SNF2 Helicase protein KAR29_11615 PF00271 Helicase conserved C-terminal domain KAR29_11615 PF00176 SNF2 family N-terminal domain KAR29_11620 PF00271 Helicase conserved C-terminal domain KAR29_11620 PF00270 DEAD/DEAH box helicase KAR29_11620 PF09369 Domain of unknown function (DUF1998) KAR29_11630 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KAR29_11630 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KAR29_11630 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KAR29_11630 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KAR29_11635 PF02540 NAD synthase KAR29_11635 PF00795 Carbon-nitrogen hydrolase KAR29_11640 PF01252 Signal peptidase (SPase) II KAR29_11650 PF00005 ABC transporter KAR29_11650 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KAR29_11655 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KAR29_11655 PF00005 ABC transporter KAR29_11660 PF12911 N-terminal TM domain of oligopeptide transport permease C KAR29_11660 PF00528 Binding-protein-dependent transport system inner membrane component KAR29_11665 PF00528 Binding-protein-dependent transport system inner membrane component KAR29_11670 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KAR29_11680 PF01546 Peptidase family M20/M25/M40 KAR29_11685 PF00990 Diguanylate cyclase, GGDEF domain KAR29_11690 PF01546 Peptidase family M20/M25/M40 KAR29_11700 PF05167 Uncharacterised ACR (DUF711) KAR29_11705 PF00392 Bacterial regulatory proteins, gntR family KAR29_11705 PF07729 FCD domain KAR29_11710 PF07670 Nucleoside recognition KAR29_11715 PF09861 Lactate racemase N-terminal domain KAR29_11720 PF00266 Aminotransferase class-V KAR29_11725 PF07969 Amidohydrolase family KAR29_11730 PF12544 Lysine-2,3-aminomutase KAR29_11730 PF04055 Radical SAM superfamily KAR29_11735 PF01546 Peptidase family M20/M25/M40 KAR29_11735 PF07687 Peptidase dimerisation domain KAR29_11740 PF00474 Sodium:solute symporter family KAR29_11750 PF01042 Endoribonuclease L-PSP KAR29_11755 PF00209 Sodium:neurotransmitter symporter family KAR29_11765 PF13847 Methyltransferase domain KAR29_11770 PF01212 Beta-eliminating lyase KAR29_11775 PF01588 Putative tRNA binding domain KAR29_11780 PF04029 2-phosphosulpholactate phosphatase KAR29_11795 PF02219 Methylenetetrahydrofolate reductase KAR29_11800 PF02574 Homocysteine S-methyltransferase KAR29_11800 PF00809 Pterin binding enzyme KAR29_11800 PF02965 Vitamin B12 dependent methionine synthase, activation domain KAR29_11800 PF02310 B12 binding domain KAR29_11800 PF02607 B12 binding domain KAR29_11820 PF01546 Peptidase family M20/M25/M40 KAR29_11830 PF00155 Aminotransferase class I and II KAR29_11840 PF00534 Glycosyl transferases group 1 KAR29_11845 PF02358 Trehalose-phosphatase KAR29_11850 PF00982 Glycosyltransferase family 20 KAR29_11855 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component KAR29_11855 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component KAR29_11860 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component KAR29_11860 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component KAR29_11865 PF03480 Bacterial extracellular solute-binding protein, family 7 KAR29_11870 PF00155 Aminotransferase class I and II KAR29_11875 PF00392 Bacterial regulatory proteins, gntR family KAR29_11875 PF07729 FCD domain KAR29_11880 PF01012 Electron transfer flavoprotein domain KAR29_11885 PF01012 Electron transfer flavoprotein domain KAR29_11885 PF00766 Electron transfer flavoprotein FAD-binding domain KAR29_11890 PF01565 FAD binding domain KAR29_11890 PF02913 FAD linked oxidases, C-terminal domain KAR29_11905 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KAR29_11905 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KAR29_11910 PF00563 EAL domain KAR29_11910 PF00990 Diguanylate cyclase, GGDEF domain KAR29_11910 PF03707 Bacterial signalling protein N terminal repeat KAR29_11930 PF02773 S-adenosylmethionine synthetase, C-terminal domain KAR29_11930 PF00438 S-adenosylmethionine synthetase, N-terminal domain KAR29_11930 PF02772 S-adenosylmethionine synthetase, central domain KAR29_11940 PF04055 Radical SAM superfamily KAR29_11945 PF01228 Glycine radical KAR29_11945 PF02901 Pyruvate formate lyase-like KAR29_11950 PF00936 BMC domain KAR29_11955 PF00936 BMC domain KAR29_11965 PF01228 Glycine radical KAR29_11965 PF02901 Pyruvate formate lyase-like KAR29_11970 PF00936 BMC domain KAR29_11975 PF07687 Peptidase dimerisation domain KAR29_11975 PF01546 Peptidase family M20/M25/M40 KAR29_11980 PF00230 Major intrinsic protein KAR29_11985 PF00936 BMC domain KAR29_11990 PF13237 4Fe-4S dicluster domain KAR29_11990 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit KAR29_11990 PF13375 RnfC Barrel sandwich hybrid domain KAR29_11990 PF10531 SLBB domain KAR29_11995 PF00171 Aldehyde dehydrogenase family KAR29_12000 PF03928 Haem-degrading KAR29_12005 PF03319 Ethanolamine utilisation protein EutN/carboxysome KAR29_12025 PF00936 BMC domain KAR29_12030 PF00936 BMC domain KAR29_12040 PF08841 Diol dehydratase reactivase ATPase-like domain KAR29_12040 PF18427 DD-reactivating factor swiveling domain KAR29_12045 PF02287 Dehydratase small subunit KAR29_12050 PF02288 Dehydratase medium subunit KAR29_12055 PF02286 Dehydratase large subunit KAR29_12060 PF00936 BMC domain KAR29_12065 PF00936 BMC domain KAR29_12070 PF10662 Ethanolamine utilisation - propanediol utilisation KAR29_12075 PF00936 BMC domain KAR29_12080 PF04397 LytTr DNA-binding domain KAR29_12080 PF00072 Response regulator receiver domain KAR29_12085 PF06580 Histidine kinase KAR29_12085 PF07694 5TMR of 5TMR-LYT KAR29_12085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAR29_12090 PF00465 Iron-containing alcohol dehydrogenase KAR29_12095 PF07729 FCD domain KAR29_12095 PF00392 Bacterial regulatory proteins, gntR family KAR29_12115 PF00221 Aromatic amino acid lyase KAR29_12125 PF07690 Major Facilitator Superfamily KAR29_12130 PF05173 Dihydrodipicolinate reductase, C-terminus KAR29_12130 PF01113 Dihydrodipicolinate reductase, N-terminus KAR29_12135 PF02954 Bacterial regulatory protein, Fis family KAR29_12135 PF00989 PAS fold KAR29_12135 PF00158 Sigma-54 interaction domain KAR29_12165 PF00330 Aconitase family (aconitate hydratase) KAR29_12170 PF00180 Isocitrate/isopropylmalate dehydrogenase KAR29_12175 PF06857 Malonate decarboxylase delta subunit (MdcD) KAR29_12180 PF03328 HpcH/HpaI aldolase/citrate lyase family KAR29_12185 PF04223 Citrate lyase, alpha subunit (CitF) KAR29_12190 PF01557 Fumarylacetoacetate (FAA) hydrolase family KAR29_12200 PF06470 SMC proteins Flexible Hinge Domain KAR29_12200 PF02463 RecF/RecN/SMC N terminal domain KAR29_12205 PF11849 Domain of unknown function (DUF3369) KAR29_12210 PF03129 Anticodon binding domain KAR29_12210 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KAR29_12210 PF04073 Aminoacyl-tRNA editing domain KAR29_12225 PF03576 Peptidase family S58 KAR29_12240 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KAR29_12240 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAR29_12245 PF07729 FCD domain KAR29_12245 PF00392 Bacterial regulatory proteins, gntR family KAR29_12250 PF01266 FAD dependent oxidoreductase KAR29_12255 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAR29_12255 PF04324 BFD-like [2Fe-2S] binding domain KAR29_12265 PF12706 Beta-lactamase superfamily domain KAR29_12270 PF00474 Sodium:solute symporter family KAR29_12275 PF03577 Peptidase family C69 KAR29_12280 PF04454 Encapsulating protein for peroxidase KAR29_12290 PF00497 Bacterial extracellular solute-binding proteins, family 3 KAR29_12300 PF14535 AMP-binding enzyme C-terminal domain KAR29_12300 PF00501 AMP-binding enzyme KAR29_12310 PF00258 Flavodoxin KAR29_12315 PF02082 Transcriptional regulator KAR29_12320 PF00266 Aminotransferase class-V KAR29_12325 PF01592 NifU-like N terminal domain KAR29_12335 PF00155 Aminotransferase class I and II KAR29_12340 PF03315 Serine dehydratase beta chain KAR29_12340 PF01842 ACT domain KAR29_12345 PF13533 Biotin-lipoyl like KAR29_12350 PF00873 AcrB/AcrD/AcrF family KAR29_12355 PF01228 Glycine radical KAR29_12355 PF02901 Pyruvate formate lyase-like KAR29_12360 PF03480 Bacterial extracellular solute-binding protein, family 7 KAR29_12370 PF02423 Ornithine cyclodeaminase/mu-crystallin family KAR29_12380 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component KAR29_12380 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component KAR29_12390 PF03480 Bacterial extracellular solute-binding protein, family 7 KAR29_12395 PF00392 Bacterial regulatory proteins, gntR family KAR29_12395 PF07729 FCD domain KAR29_12400 PF04055 Radical SAM superfamily KAR29_12405 PF13533 Biotin-lipoyl like KAR29_12410 PF02321 Outer membrane efflux protein KAR29_12415 PF00873 AcrB/AcrD/AcrF family KAR29_12420 PF00440 Bacterial regulatory proteins, tetR family KAR29_12420 PF08361 MAATS-type transcriptional repressor, C-terminal region KAR29_12425 PF08279 HTH domain KAR29_12425 PF02829 3H domain KAR29_12430 PF02321 Outer membrane efflux protein KAR29_12435 PF00873 AcrB/AcrD/AcrF family KAR29_12445 PF02909 Tetracyclin repressor-like, C-terminal domain KAR29_12445 PF00440 Bacterial regulatory proteins, tetR family KAR29_12450 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KAR29_12450 PF00205 Thiamine pyrophosphate enzyme, central domain KAR29_12450 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KAR29_12485 PF01266 FAD dependent oxidoreductase KAR29_12500 PF00474 Sodium:solute symporter family KAR29_12505 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain KAR29_12505 PF02129 X-Pro dipeptidyl-peptidase (S15 family) KAR29_12515 PF07729 FCD domain KAR29_12515 PF00392 Bacterial regulatory proteins, gntR family KAR29_12530 PF08241 Methyltransferase domain KAR29_12535 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component KAR29_12535 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component KAR29_12550 PF00633 Helix-hairpin-helix motif KAR29_12550 PF14815 NUDIX domain KAR29_12550 PF00730 HhH-GPD superfamily base excision DNA repair protein KAR29_12555 PF01678 Diaminopimelate epimerase KAR29_12570 PF04998 RNA polymerase Rpb1, domain 5 KAR29_12570 PF05000 RNA polymerase Rpb1, domain 4 KAR29_12570 PF04983 RNA polymerase Rpb1, domain 3 KAR29_12570 PF00623 RNA polymerase Rpb1, domain 2 KAR29_12570 PF04997 RNA polymerase Rpb1, domain 1 KAR29_12580 PF02954 Bacterial regulatory protein, Fis family KAR29_12580 PF00072 Response regulator receiver domain KAR29_12580 PF00158 Sigma-54 interaction domain KAR29_12630 PF18211 Csm1 subunit domain B KAR29_12640 PF03787 RAMP superfamily KAR29_12650 PF03787 RAMP superfamily KAR29_12665 PF09827 CRISPR associated protein Cas2 KAR29_12690 PF01867 CRISPR associated protein Cas1 KAR29_12700 PF05161 MOFRL family KAR29_12700 PF13660 Domain of unknown function (DUF4147) KAR29_12705 PF03806 AbgT putative transporter family KAR29_12710 PF01546 Peptidase family M20/M25/M40 KAR29_12710 PF07687 Peptidase dimerisation domain KAR29_12715 PF07687 Peptidase dimerisation domain KAR29_12715 PF01546 Peptidase family M20/M25/M40 KAR29_12730 PF00005 ABC transporter KAR29_12745 PF04074 YhcH/YjgK/YiaL KAR29_12750 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KAR29_12750 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KAR29_12755 PF00512 His Kinase A (phospho-acceptor) domain KAR29_12755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAR29_12755 PF00672 HAMP domain KAR29_12755 PF01627 Hpt domain KAR29_12755 PF00072 Response regulator receiver domain KAR29_12755 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KAR29_12760 PF00072 Response regulator receiver domain KAR29_12770 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KAR29_12770 PF00072 Response regulator receiver domain KAR29_12770 PF01627 Hpt domain KAR29_12770 PF00512 His Kinase A (phospho-acceptor) domain KAR29_12770 PF00672 HAMP domain KAR29_12770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAR29_12775 PF03009 Glycerophosphoryl diester phosphodiesterase family KAR29_12780 PF13416 Bacterial extracellular solute-binding protein KAR29_12785 PF08402 TOBE domain KAR29_12785 PF00005 ABC transporter KAR29_12790 PF00528 Binding-protein-dependent transport system inner membrane component KAR29_12795 PF00528 Binding-protein-dependent transport system inner membrane component KAR29_12800 PF02743 Cache domain KAR29_12800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAR29_12800 PF00672 HAMP domain KAR29_12805 PF01966 HD domain KAR29_12805 PF00672 HAMP domain KAR29_12825 PF07729 FCD domain KAR29_12825 PF00392 Bacterial regulatory proteins, gntR family KAR29_12830 PF03480 Bacterial extracellular solute-binding protein, family 7 KAR29_12840 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component KAR29_12840 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component KAR29_12845 PF00920 Dehydratase family KAR29_12855 PF09962 Uncharacterized conserved protein (DUF2196) KAR29_12885 PF01551 Peptidase family M23 KAR29_12885 PF01476 LysM domain KAR29_12915 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component KAR29_12915 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component KAR29_12920 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component KAR29_12920 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component KAR29_12925 PF03480 Bacterial extracellular solute-binding protein, family 7 KAR29_12940 PF01842 ACT domain KAR29_12940 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KAR29_12940 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KAR29_12945 PF00392 Bacterial regulatory proteins, gntR family KAR29_12945 PF07729 FCD domain KAR29_12950 PF00155 Aminotransferase class I and II KAR29_12960 PF00202 Aminotransferase class-III KAR29_12970 PF06968 Biotin and Thiamin Synthesis associated domain KAR29_12970 PF04055 Radical SAM superfamily KAR29_12975 PF02632 BioY family KAR29_12980 PF00011 Hsp20/alpha crystallin family KAR29_13000 PF03480 Bacterial extracellular solute-binding protein, family 7 KAR29_13010 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component KAR29_13010 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component KAR29_13030 PF01022 Bacterial regulatory protein, arsR family KAR29_13035 PF02743 Cache domain KAR29_13035 PF00672 HAMP domain KAR29_13035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAR29_13045 PF02463 RecF/RecN/SMC N terminal domain KAR29_13050 PF07729 FCD domain KAR29_13050 PF00392 Bacterial regulatory proteins, gntR family KAR29_13055 PF00155 Aminotransferase class I and II KAR29_13060 PF00291 Pyridoxal-phosphate dependent enzyme KAR29_13070 PF00155 Aminotransferase class I and II KAR29_13075 PF02423 Ornithine cyclodeaminase/mu-crystallin family KAR29_13145 PF00990 Diguanylate cyclase, GGDEF domain KAR29_13170 PF02581 Thiamine monophosphate synthase KAR29_13175 PF02110 Hydroxyethylthiazole kinase family KAR29_13180 PF08543 Phosphomethylpyrimidine kinase KAR29_13185 PF09084 NMT1/THI5 like KAR29_13195 PF00528 Binding-protein-dependent transport system inner membrane component KAR29_13200 PF00005 ABC transporter KAR29_13230 PF00155 Aminotransferase class I and II KAR29_13245 PF00149 Calcineurin-like phosphoesterase KAR29_13255 PF02424 ApbE family KAR29_13270 PF04060 Putative Fe-S cluster KAR29_13275 PF02508 Rnf-Nqr subunit, membrane protein KAR29_13280 PF02508 Rnf-Nqr subunit, membrane protein KAR29_13285 PF04205 FMN-binding domain KAR29_13290 PF03116 NQR2, RnfD, RnfE family KAR29_13295 PF13237 4Fe-4S dicluster domain KAR29_13295 PF13375 RnfC Barrel sandwich hybrid domain KAR29_13295 PF10531 SLBB domain KAR29_13295 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit KAR29_13300 PF00557 Metallopeptidase family M24 KAR29_13300 PF01321 Creatinase/Prolidase N-terminal domain KAR29_13310 PF00474 Sodium:solute symporter family KAR29_13315 PF00392 Bacterial regulatory proteins, gntR family KAR29_13315 PF07729 FCD domain KAR29_13320 PF00563 EAL domain KAR29_13320 PF00990 Diguanylate cyclase, GGDEF domain KAR29_13320 PF03707 Bacterial signalling protein N terminal repeat KAR29_13325 PF01699 Sodium/calcium exchanger protein KAR29_13335 PF03480 Bacterial extracellular solute-binding protein, family 7 KAR29_13345 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component KAR29_13345 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component KAR29_13350 PF01546 Peptidase family M20/M25/M40 KAR29_13360 PF00741 Gas vesicle protein KAR29_13370 PF00741 Gas vesicle protein KAR29_13370 PF05121 Gas vesicle protein K KAR29_13380 PF00741 Gas vesicle protein KAR29_13395 PF17862 AAA+ lid domain KAR29_13395 PF00004 ATPase family associated with various cellular activities (AAA) KAR29_13395 PF01434 Peptidase family M41 KAR29_13395 PF06480 FtsH Extracellular KAR29_13405 PF07728 AAA domain (dynein-related subfamily) KAR29_13425 PF00741 Gas vesicle protein KAR29_13430 PF00741 Gas vesicle protein KAR29_13435 PF00741 Gas vesicle protein KAR29_13445 PF02743 Cache domain KAR29_13445 PF00672 HAMP domain KAR29_13445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAR29_13460 PF17200 Single Cache domain 2 KAR29_13460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAR29_13460 PF00672 HAMP domain KAR29_13465 PF16921 Tex protein YqgF-like domain KAR29_13465 PF09371 Tex-like protein N-terminal domain KAR29_13465 PF17674 HHH domain KAR29_13465 PF00575 S1 RNA binding domain KAR29_13470 PF17806 Sarcosine oxidase A3 domain KAR29_13470 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAR29_13470 PF08669 Glycine cleavage T-protein C-terminal barrel domain KAR29_13470 PF01571 Aminomethyltransferase folate-binding domain KAR29_13475 PF00361 Proton-conducting membrane transporter KAR29_13480 PF00146 NADH dehydrogenase KAR29_13490 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KAR29_13490 PF00361 Proton-conducting membrane transporter KAR29_13500 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit KAR29_13505 PF00497 Bacterial extracellular solute-binding proteins, family 3 KAR29_13520 PF00300 Histidine phosphatase superfamily (branch 1) KAR29_13525 PF05552 Conserved TM helix KAR29_13525 PF00924 Mechanosensitive ion channel KAR29_13535 PF12849 PBP superfamily domain KAR29_13540 PF00528 Binding-protein-dependent transport system inner membrane component KAR29_13545 PF00528 Binding-protein-dependent transport system inner membrane component KAR29_13550 PF00005 ABC transporter KAR29_13555 PF01895 PhoU domain KAR29_13560 PF00072 Response regulator receiver domain KAR29_13560 PF00486 Transcriptional regulatory protein, C terminal KAR29_13565 PF00512 His Kinase A (phospho-acceptor) domain KAR29_13565 PF00989 PAS fold KAR29_13565 PF16736 Single Cache-like KAR29_13565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAR29_13580 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAR29_13580 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KAR29_13585 PF02743 Cache domain KAR29_13585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAR29_13585 PF00672 HAMP domain KAR29_13610 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KAR29_13620 PF10609 NUBPL iron-transfer P-loop NTPase KAR29_13625 PF01497 Periplasmic binding protein KAR29_13630 PF01032 FecCD transport family KAR29_13635 PF00005 ABC transporter KAR29_13640 PF04055 Radical SAM superfamily KAR29_13640 PF01926 50S ribosome-binding GTPase KAR29_13640 PF01018 GTP1/OBG KAR29_13680 PF03952 Enolase, N-terminal domain KAR29_13680 PF00113 Enolase, C-terminal TIM barrel domain KAR29_13685 PF02641 Uncharacterized ACR, COG1993 KAR29_13690 PF00082 Subtilase family KAR29_13695 PF13419 Haloacid dehalogenase-like hydrolase KAR29_13700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAR29_13700 PF00672 HAMP domain KAR29_13715 PF00291 Pyridoxal-phosphate dependent enzyme KAR29_13720 PF00072 Response regulator receiver domain KAR29_13720 PF00990 Diguanylate cyclase, GGDEF domain KAR29_13725 PF00072 Response regulator receiver domain KAR29_13725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAR29_13725 PF00512 His Kinase A (phospho-acceptor) domain KAR29_13725 PF01627 Hpt domain KAR29_13735 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain KAR29_13735 PF00749 tRNA synthetases class I (E and Q), catalytic domain KAR29_13740 PF13193 AMP-binding enzyme C-terminal domain KAR29_13740 PF00501 AMP-binding enzyme KAR29_13765 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KAR29_13765 PF00205 Thiamine pyrophosphate enzyme, central domain KAR29_13765 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KAR29_13770 PF00155 Aminotransferase class I and II KAR29_13775 PF00005 ABC transporter KAR29_13775 PF00571 CBS domain KAR29_13780 PF00528 Binding-protein-dependent transport system inner membrane component KAR29_13790 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 KAR29_13790 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain KAR29_13795 PF07687 Peptidase dimerisation domain KAR29_13795 PF01546 Peptidase family M20/M25/M40 KAR29_13805 PF17853 GGDEF-like domain KAR29_13805 PF13556 PucR C-terminal helix-turn-helix domain KAR29_13805 PF07905 Purine catabolism regulatory protein-like family KAR29_13810 PF03606 C4-dicarboxylate anaerobic carrier KAR29_13830 PF04754 Putative transposase, YhgA-like KAR29_13835 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KAR29_13845 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase KAR29_13850 PF01979 Amidohydrolase family KAR29_13855 PF02378 Phosphotransferase system, EIIC KAR29_13855 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KAR29_13855 PF00367 phosphotransferase system, EIIB KAR29_13860 PF00392 Bacterial regulatory proteins, gntR family KAR29_13860 PF07702 UTRA domain KAR29_13865 PF17932 Tetracyclin repressor-like, C-terminal domain KAR29_13865 PF00440 Bacterial regulatory proteins, tetR family KAR29_13870 PF06832 Penicillin-Binding Protein C-terminus Family KAR29_13870 PF00912 Transglycosylase KAR29_13870 PF00905 Penicillin binding protein transpeptidase domain KAR29_13890 PF00196 Bacterial regulatory proteins, luxR family KAR29_13890 PF00072 Response regulator receiver domain KAR29_13910 PF07715 TonB-dependent Receptor Plug Domain KAR29_13910 PF00593 TonB dependent receptor KAR29_13920 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase KAR29_13920 PF04101 Glycosyltransferase family 28 C-terminal domain KAR29_13930 PF03458 UPF0126 domain