locus-tag class description Sfum_0001 PF11638 DnaA N-terminal domain Sfum_0001 PF08299 Bacterial dnaA protein helix-turn-helix Sfum_0001 PF00308 Bacterial dnaA protein Sfum_0002 PF00216 Bacterial DNA-binding protein Sfum_0003 PF01242 6-pyruvoyl tetrahydropterin synthase Sfum_0005 PF01435 Peptidase family M48 Sfum_0006 PF00571 CBS domain Sfum_0006 PF01380 SIS domain Sfum_0007 PF00156 Phosphoribosyl transferase domain Sfum_0008 PF02142 MGS-like domain Sfum_0008 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Sfum_0008 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Sfum_0009 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain Sfum_0009 PF00117 Glutamine amidotransferase class-I Sfum_0010 PF02348 Cytidylyltransferase Sfum_0011 PF03710 Glutamate-ammonia ligase adenylyltransferase Sfum_0011 PF08335 GlnD PII-uridylyltransferase Sfum_0016 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Sfum_0017 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Sfum_0017 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II Sfum_0017 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Sfum_0020 PF13654 AAA domain Sfum_0020 PF05362 Lon protease (S16) C-terminal proteolytic domain Sfum_0022 PF01910 Thiamine-binding protein Sfum_0027 PF12849 PBP superfamily domain Sfum_0028 PF00528 Binding-protein-dependent transport system inner membrane component Sfum_0029 PF00005 ABC transporter Sfum_0029 PF12857 TOBE-like domain Sfum_0030 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Sfum_0030 PF00384 Molybdopterin oxidoreductase Sfum_0030 PF12838 4Fe-4S dicluster domain Sfum_0030 PF01568 Molydopterin dinucleotide binding domain Sfum_0030 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Sfum_0031 PF00384 Molybdopterin oxidoreductase Sfum_0031 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Sfum_0031 PF01568 Molydopterin dinucleotide binding domain Sfum_0032 PF00994 Probable molybdopterin binding domain Sfum_0032 PF02464 Competence-damaged protein Sfum_0034 PF02634 FdhD/NarQ family Sfum_0035 PF01568 Molydopterin dinucleotide binding domain Sfum_0035 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Sfum_0035 PF00384 Molybdopterin oxidoreductase Sfum_0036 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Sfum_0036 PF00384 Molybdopterin oxidoreductase Sfum_0036 PF01568 Molydopterin dinucleotide binding domain Sfum_0037 PF13247 4Fe-4S dicluster domain Sfum_0039 PF12849 PBP superfamily domain Sfum_0041 PF01264 Chorismate synthase Sfum_0042 PF02617 ATP-dependent Clp protease adaptor protein ClpS Sfum_0043 PF17871 AAA lid domain Sfum_0043 PF10431 C-terminal, D2-small domain, of ClpB protein Sfum_0043 PF00004 ATPase family associated with various cellular activities (AAA) Sfum_0043 PF02861 Clp amino terminal domain, pathogenicity island component Sfum_0043 PF07724 AAA domain (Cdc48 subfamily) Sfum_0044 PF03588 Leucyl/phenylalanyl-tRNA protein transferase Sfum_0047 PF00696 Amino acid kinase family Sfum_0049 PF01066 CDP-alcohol phosphatidyltransferase Sfum_0050 PF01464 Transglycosylase SLT domain Sfum_0051 PF00923 Transaldolase/Fructose-6-phosphate aldolase Sfum_0053 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) Sfum_0054 PF00155 Aminotransferase class I and II Sfum_0055 PF05173 Dihydrodipicolinate reductase, C-terminus Sfum_0055 PF01113 Dihydrodipicolinate reductase, N-terminus Sfum_0056 PF00701 Dihydrodipicolinate synthetase family Sfum_0057 PF01678 Diaminopimelate epimerase Sfum_0058 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Sfum_0058 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Sfum_0060 PF00206 Lyase Sfum_0060 PF14698 Argininosuccinate lyase C-terminal Sfum_0061 PF00764 Arginosuccinate synthase Sfum_0062 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Sfum_0062 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Sfum_0063 PF00202 Aminotransferase class-III Sfum_0064 PF00696 Amino acid kinase family Sfum_0066 PF00227 Proteasome subunit Sfum_0067 PF00589 Phage integrase family Sfum_0067 PF02899 Phage integrase, N-terminal SAM-like domain Sfum_0068 PF03764 Elongation factor G, domain IV Sfum_0068 PF00679 Elongation factor G C-terminus Sfum_0068 PF03144 Elongation factor Tu domain 2 Sfum_0068 PF14492 Elongation Factor G, domain II Sfum_0068 PF00009 Elongation factor Tu GTP binding domain Sfum_0070 PF00994 Probable molybdopterin binding domain Sfum_0076 PF00152 tRNA synthetases class II (D, K and N) Sfum_0077 PF09285 Elongation factor P, C-terminal Sfum_0077 PF08207 Elongation factor P (EF-P) KOW-like domain Sfum_0077 PF01132 Elongation factor P (EF-P) OB domain Sfum_0078 PF03952 Enolase, N-terminal domain Sfum_0078 PF00113 Enolase, C-terminal TIM barrel domain Sfum_0079 PF02754 Cysteine-rich domain Sfum_0080 PF02589 LUD domain Sfum_0080 PF13183 4Fe-4S dicluster domain Sfum_0080 PF11870 Domain of unknown function (DUF3390) Sfum_0081 PF02589 LUD domain Sfum_0084 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Sfum_0086 PF00005 ABC transporter Sfum_0092 PF02417 Chromate transporter Sfum_0094 PF00083 Sugar (and other) transporter Sfum_0094 PF08946 Osmosensory transporter coiled coil Sfum_0097 PF09828 Chromate resistance exported protein Sfum_0098 PF02190 ATP-dependent protease La (LON) substrate-binding domain Sfum_0098 PF00004 ATPase family associated with various cellular activities (AAA) Sfum_0098 PF05362 Lon protease (S16) C-terminal proteolytic domain Sfum_0099 PF06689 ClpX C4-type zinc finger Sfum_0099 PF10431 C-terminal, D2-small domain, of ClpB protein Sfum_0099 PF07724 AAA domain (Cdc48 subfamily) Sfum_0100 PF00574 Clp protease Sfum_0101 PF05697 Bacterial trigger factor protein (TF) Sfum_0101 PF05698 Bacterial trigger factor protein (TF) C-terminus Sfum_0101 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Sfum_0102 PF07963 Prokaryotic N-terminal methylation motif Sfum_0102 PF08334 Type II secretion system (T2SS), protein G Sfum_0103 PF16199 Radical_SAM C-terminal domain Sfum_0103 PF04055 Radical SAM superfamily Sfum_0104 PF13932 GidA associated domain Sfum_0104 PF01134 Glucose inhibited division protein A Sfum_0106 PF01012 Electron transfer flavoprotein domain Sfum_0107 PF00766 Electron transfer flavoprotein FAD-binding domain Sfum_0107 PF01012 Electron transfer flavoprotein domain Sfum_0108 PF13193 AMP-binding enzyme C-terminal domain Sfum_0108 PF00501 AMP-binding enzyme Sfum_0113 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Sfum_0113 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Sfum_0114 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Sfum_0115 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Sfum_0115 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II Sfum_0117 PF00437 Type II/IV secretion system protein Sfum_0117 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain Sfum_0118 PF00482 Type II secretion system (T2SS), protein F Sfum_0119 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_0119 PF00512 His Kinase A (phospho-acceptor) domain Sfum_0120 PF00166 Chaperonin 10 Kd subunit Sfum_0121 PF00118 TCP-1/cpn60 chaperonin family Sfum_0122 PF00133 tRNA synthetases class I (I, L, M and V) Sfum_0122 PF08264 Anticodon-binding domain of tRNA Sfum_0122 PF06827 Zinc finger found in FPG and IleRS Sfum_0123 PF01252 Signal peptidase (SPase) II Sfum_0126 PF00114 Pilin (bacterial filament) Sfum_0126 PF07963 Prokaryotic N-terminal methylation motif Sfum_0128 PF00535 Glycosyl transferase family 2 Sfum_0130 PF00535 Glycosyl transferase family 2 Sfum_0132 PF01040 UbiA prenyltransferase family Sfum_0135 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family Sfum_0136 PF02796 Helix-turn-helix domain of resolvase Sfum_0136 PF00665 Integrase core domain Sfum_0137 PF01695 IstB-like ATP binding protein Sfum_0140 PF07992 Pyridine nucleotide-disulphide oxidoreductase Sfum_0140 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Sfum_0140 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Sfum_0142 PF01565 FAD binding domain Sfum_0142 PF04030 D-arabinono-1,4-lactone oxidase Sfum_0146 PF00535 Glycosyl transferase family 2 Sfum_0147 PF01327 Polypeptide deformylase Sfum_0148 PF00551 Formyl transferase Sfum_0148 PF02911 Formyl transferase, C-terminal domain Sfum_0150 PF01189 16S rRNA methyltransferase RsmB/F Sfum_0150 PF01029 NusB family Sfum_0151 PF01209 ubiE/COQ5 methyltransferase family Sfum_0154 PF01588 Putative tRNA binding domain Sfum_0154 PF00133 tRNA synthetases class I (I, L, M and V) Sfum_0154 PF09334 tRNA synthetases class I (M) Sfum_0155 PF04468 PSP1 C-terminal conserved region Sfum_0157 PF01966 HD domain Sfum_0157 PF01336 OB-fold nucleic acid binding domain Sfum_0161 PF01121 Dephospho-CoA kinase Sfum_0163 PF14528 LAGLIDADG-like domain Sfum_0163 PF01458 Uncharacterized protein family (UPF0051) Sfum_0164 PF00005 ABC transporter Sfum_0166 PF00919 Uncharacterized protein family UPF0004 Sfum_0166 PF04055 Radical SAM superfamily Sfum_0168 PF00005 ABC transporter Sfum_0168 PF09383 NIL domain Sfum_0169 PF00557 Metallopeptidase family M24 Sfum_0169 PF01321 Creatinase/Prolidase N-terminal domain Sfum_0171 PF00571 CBS domain Sfum_0173 PF13085 2Fe-2S iron-sulfur cluster binding domain Sfum_0174 PF00890 FAD binding domain Sfum_0174 PF02910 Fumarate reductase flavoprotein C-term Sfum_0179 PF01370 NAD dependent epimerase/dehydratase family Sfum_0184 PF01145 SPFH domain / Band 7 family Sfum_0185 PF01145 SPFH domain / Band 7 family Sfum_0186 PF00535 Glycosyl transferase family 2 Sfum_0187 PF00072 Response regulator receiver domain Sfum_0188 PF03739 Lipopolysaccharide export system permease LptF/LptG Sfum_0190 PF13286 Phosphohydrolase-associated domain Sfum_0190 PF01966 HD domain Sfum_0192 PF08264 Anticodon-binding domain of tRNA Sfum_0192 PF00133 tRNA synthetases class I (I, L, M and V) Sfum_0192 PF10458 Valyl tRNA synthetase tRNA binding arm Sfum_0193 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain Sfum_0193 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain Sfum_0194 PF03591 AzlC protein Sfum_0196 PF00009 Elongation factor Tu GTP binding domain Sfum_0196 PF11987 Translation-initiation factor 2 Sfum_0196 PF04760 Translation initiation factor IF-2, N-terminal region Sfum_0197 PF14748 Pyrroline-5-carboxylate reductase dimerisation Sfum_0197 PF03807 NADP oxidoreductase coenzyme F420-dependent Sfum_0199 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 Sfum_0200 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Sfum_0201 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Sfum_0202 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Sfum_0203 PF00146 NADH dehydrogenase Sfum_0204 PF12838 4Fe-4S dicluster domain Sfum_0205 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Sfum_0206 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Sfum_0207 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus Sfum_0207 PF00361 Proton-conducting membrane transporter Sfum_0207 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Sfum_0208 PF00361 Proton-conducting membrane transporter Sfum_0209 PF00361 Proton-conducting membrane transporter Sfum_0212 PF17782 DprA winged helix domain Sfum_0212 PF02481 DNA recombination-mediator protein A Sfum_0213 PF01396 Topoisomerase DNA binding C4 zinc finger Sfum_0213 PF01751 Toprim domain Sfum_0213 PF01131 DNA topoisomerase Sfum_0214 PF01478 Type IV leader peptidase family Sfum_0214 PF06750 Bacterial Peptidase A24 N-terminal domain Sfum_0215 PF04452 RNA methyltransferase Sfum_0224 PF08241 Methyltransferase domain Sfum_0226 PF01272 Transcription elongation factor, GreA/GreB, C-term Sfum_0226 PF03449 Transcription elongation factor, N-terminal Sfum_0227 PF00293 NUDIX domain Sfum_0227 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain Sfum_0227 PF09297 NADH pyrophosphatase zinc ribbon domain Sfum_0228 PF02416 mttA/Hcf106 family Sfum_0230 PF03006 Haemolysin-III related Sfum_0231 PF00072 Response regulator receiver domain Sfum_0231 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_0231 PF08448 PAS fold Sfum_0231 PF00512 His Kinase A (phospho-acceptor) domain Sfum_0231 PF13188 PAS domain Sfum_0234 PF05443 ROS/MUCR transcriptional regulator protein Sfum_0238 PF00300 Histidine phosphatase superfamily (branch 1) Sfum_0240 PF01209 ubiE/COQ5 methyltransferase family Sfum_0242 PF13091 PLD-like domain Sfum_0242 PF13396 Phospholipase_D-nuclease N-terminal Sfum_0243 PF03109 ABC1 family Sfum_0246 PF04015 Domain of unknown function (DUF362) Sfum_0248 PF07043 Protein of unknown function (DUF1328) Sfum_0252 PF00005 ABC transporter Sfum_0253 PF00005 ABC transporter Sfum_0253 PF12704 MacB-like periplasmic core domain Sfum_0253 PF02687 FtsX-like permease family Sfum_0255 PF02687 FtsX-like permease family Sfum_0255 PF12704 MacB-like periplasmic core domain Sfum_0258 PF04493 Endonuclease V Sfum_0259 PF00317 Ribonucleotide reductase, all-alpha domain Sfum_0259 PF02867 Ribonucleotide reductase, barrel domain Sfum_0259 PF03477 ATP cone domain Sfum_0260 PF00012 Hsp70 protein Sfum_0261 PF01556 DnaJ C terminal domain Sfum_0261 PF00226 DnaJ domain Sfum_0263 PF10431 C-terminal, D2-small domain, of ClpB protein Sfum_0263 PF02861 Clp amino terminal domain, pathogenicity island component Sfum_0263 PF17871 AAA lid domain Sfum_0263 PF07724 AAA domain (Cdc48 subfamily) Sfum_0263 PF00004 ATPase family associated with various cellular activities (AAA) Sfum_0266 PF13847 Methyltransferase domain Sfum_0268 PF00156 Phosphoribosyl transferase domain Sfum_0270 PF01980 tRNA-methyltransferase O Sfum_0272 PF04542 Sigma-70 region 2 Sfum_0272 PF08281 Sigma-70, region 4 Sfum_0277 PF00696 Amino acid kinase family Sfum_0280 PF06940 Domain of unknown function (DUF1287) Sfum_0281 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_0281 PF00512 His Kinase A (phospho-acceptor) domain Sfum_0283 PF00005 ABC transporter Sfum_0284 PF00528 Binding-protein-dependent transport system inner membrane component Sfum_0285 PF00528 Binding-protein-dependent transport system inner membrane component Sfum_0286 PF12849 PBP superfamily domain Sfum_0287 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Sfum_0289 PF05958 tRNA (Uracil-5-)-methyltransferase Sfum_0289 PF01938 TRAM domain Sfum_0290 PF00912 Transglycosylase Sfum_0290 PF14814 Bifunctional transglycosylase second domain Sfum_0290 PF00905 Penicillin binding protein transpeptidase domain Sfum_0292 PF01594 AI-2E family transporter Sfum_0294 PF13426 PAS domain Sfum_0294 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_0294 PF13188 PAS domain Sfum_0294 PF00989 PAS fold Sfum_0294 PF00512 His Kinase A (phospho-acceptor) domain Sfum_0296 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Sfum_0296 PF00205 Thiamine pyrophosphate enzyme, central domain Sfum_0296 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Sfum_0297 PF13193 AMP-binding enzyme C-terminal domain Sfum_0297 PF00501 AMP-binding enzyme Sfum_0298 PF00248 Aldo/keto reductase family Sfum_0301 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Sfum_0301 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Sfum_0301 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II Sfum_0303 PF00989 PAS fold Sfum_0303 PF02954 Bacterial regulatory protein, Fis family Sfum_0303 PF00158 Sigma-54 interaction domain Sfum_0304 PF08240 Alcohol dehydrogenase GroES-like domain Sfum_0304 PF00107 Zinc-binding dehydrogenase Sfum_0306 PF08502 LeuA allosteric (dimerisation) domain Sfum_0306 PF00682 HMGL-like Sfum_0308 PF12627 Probable RNA and SrmB- binding site of polymerase A Sfum_0308 PF13735 tRNA nucleotidyltransferase domain 2 putative Sfum_0308 PF01743 Poly A polymerase head domain Sfum_0309 PF00571 CBS domain Sfum_0310 PF00005 ABC transporter Sfum_0311 PF00005 ABC transporter Sfum_0311 PF12399 Branched-chain amino acid ATP-binding cassette transporter Sfum_0314 PF13458 Periplasmic binding protein Sfum_0318 PF00025 ADP-ribosylation factor family Sfum_0323 PF02277 Phosphoribosyltransferase Sfum_0338 PF02322 Cytochrome bd terminal oxidase subunit II Sfum_0339 PF01654 Cytochrome bd terminal oxidase subunit I Sfum_0340 PF00258 Flavodoxin Sfum_0342 PF00158 Sigma-54 interaction domain Sfum_0342 PF13426 PAS domain Sfum_0342 PF02954 Bacterial regulatory protein, Fis family Sfum_0343 PF00012 Hsp70 protein Sfum_0346 PF02606 Tetraacyldisaccharide-1-P 4'-kinase Sfum_0350 PF05443 ROS/MUCR transcriptional regulator protein Sfum_0353 PF00730 HhH-GPD superfamily base excision DNA repair protein Sfum_0353 PF10576 Iron-sulfur binding domain of endonuclease III Sfum_0353 PF00633 Helix-hairpin-helix motif Sfum_0356 PF00920 Dehydratase family Sfum_0359 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Sfum_0359 PF02806 Alpha amylase, C-terminal all-beta domain Sfum_0359 PF00128 Alpha amylase, catalytic domain Sfum_0360 PF13411 MerR HTH family regulatory protein Sfum_0361 PF01018 GTP1/OBG Sfum_0361 PF01926 50S ribosome-binding GTPase Sfum_0361 PF04055 Radical SAM superfamily Sfum_0362 PF00675 Insulinase (Peptidase family M16) Sfum_0362 PF05193 Peptidase M16 inactive domain Sfum_0365 PF03562 MltA specific insert domain Sfum_0365 PF06725 3D domain Sfum_0366 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Sfum_0366 PF05221 S-adenosyl-L-homocysteine hydrolase Sfum_0367 PF02772 S-adenosylmethionine synthetase, central domain Sfum_0367 PF00438 S-adenosylmethionine synthetase, N-terminal domain Sfum_0367 PF02773 S-adenosylmethionine synthetase, C-terminal domain Sfum_0368 PF02261 Aspartate decarboxylase Sfum_0369 PF02569 Pantoate-beta-alanine ligase Sfum_0370 PF01075 Glycosyltransferase family 9 (heptosyltransferase) Sfum_0371 PF01075 Glycosyltransferase family 9 (heptosyltransferase) Sfum_0372 PF01075 Glycosyltransferase family 9 (heptosyltransferase) Sfum_0373 PF00534 Glycosyl transferases group 1 Sfum_0373 PF13439 Glycosyltransferase Family 4 Sfum_0374 PF00535 Glycosyl transferase family 2 Sfum_0375 PF01075 Glycosyltransferase family 9 (heptosyltransferase) Sfum_0376 PF03279 Bacterial lipid A biosynthesis acyltransferase Sfum_0377 PF01075 Glycosyltransferase family 9 (heptosyltransferase) Sfum_0379 PF14535 AMP-binding enzyme C-terminal domain Sfum_0379 PF00501 AMP-binding enzyme Sfum_0380 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase Sfum_0381 PF01569 PAP2 superfamily Sfum_0382 PF14535 AMP-binding enzyme C-terminal domain Sfum_0382 PF00501 AMP-binding enzyme Sfum_0383 PF00005 ABC transporter Sfum_0384 PF12399 Branched-chain amino acid ATP-binding cassette transporter Sfum_0384 PF00005 ABC transporter Sfum_0385 PF02653 Branched-chain amino acid transport system / permease component Sfum_0388 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain Sfum_0388 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain Sfum_0389 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain Sfum_0389 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain Sfum_0390 PF13183 4Fe-4S dicluster domain Sfum_0390 PF11870 Domain of unknown function (DUF3390) Sfum_0390 PF02589 LUD domain Sfum_0392 PF02913 FAD linked oxidases, C-terminal domain Sfum_0392 PF01565 FAD binding domain Sfum_0393 PF02754 Cysteine-rich domain Sfum_0398 PF02223 Thymidylate kinase Sfum_0400 PF02511 Thymidylate synthase complementing protein Sfum_0401 PF00005 ABC transporter Sfum_0402 PF02405 Permease MlaE Sfum_0405 PF00850 Histone deacetylase domain Sfum_0406 PF00581 Rhodanese-like domain Sfum_0410 PF05175 Methyltransferase small domain Sfum_0410 PF17827 PrmC N-terminal domain Sfum_0411 PF00176 SNF2 family N-terminal domain Sfum_0411 PF00271 Helicase conserved C-terminal domain Sfum_0414 PF00570 HRDC domain Sfum_0414 PF01612 3'-5' exonuclease Sfum_0417 PF01979 Amidohydrolase family Sfum_0417 PF13382 Adenine deaminase C-terminal domain Sfum_0419 PF04055 Radical SAM superfamily Sfum_0419 PF01938 TRAM domain Sfum_0419 PF00919 Uncharacterized protein family UPF0004 Sfum_0423 PF01066 CDP-alcohol phosphatidyltransferase Sfum_0424 PF02824 TGS domain Sfum_0424 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Sfum_0424 PF03129 Anticodon binding domain Sfum_0424 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Sfum_0425 PF00707 Translation initiation factor IF-3, C-terminal domain Sfum_0425 PF05198 Translation initiation factor IF-3, N-terminal domain Sfum_0426 PF01632 Ribosomal protein L35 Sfum_0427 PF00453 Ribosomal protein L20 Sfum_0428 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain Sfum_0428 PF01409 tRNA synthetases class II core domain (F) Sfum_0429 PF01588 Putative tRNA binding domain Sfum_0429 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain Sfum_0429 PF03147 Ferredoxin-fold anticodon binding domain Sfum_0429 PF03484 tRNA synthetase B5 domain Sfum_0429 PF03483 B3/4 domain Sfum_0431 PF02659 Putative manganese efflux pump Sfum_0432 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain Sfum_0432 PF02769 AIR synthase related protein, C-terminal domain Sfum_0432 PF00586 AIR synthase related protein, N-terminal domain Sfum_0434 PF00551 Formyl transferase Sfum_0438 PF04055 Radical SAM superfamily Sfum_0438 PF13186 Iron-sulfur cluster-binding domain Sfum_0439 PF12706 Beta-lactamase superfamily domain Sfum_0439 PF00753 Metallo-beta-lactamase superfamily Sfum_0440 PF00881 Nitroreductase family Sfum_0445 PF00033 Cytochrome b/b6/petB Sfum_0445 PF00032 Cytochrome b(C-terminal)/b6/petD Sfum_0446 PF00440 Bacterial regulatory proteins, tetR family Sfum_0447 PF02321 Outer membrane efflux protein Sfum_0448 PF00676 Dehydrogenase E1 component Sfum_0449 PF02780 Transketolase, C-terminal domain Sfum_0449 PF02779 Transketolase, pyrimidine binding domain Sfum_0450 PF13533 Biotin-lipoyl like Sfum_0451 PF00873 AcrB/AcrD/AcrF family Sfum_0454 PF09335 SNARE associated Golgi protein Sfum_0460 PF00056 lactate/malate dehydrogenase, NAD binding domain Sfum_0460 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain Sfum_0461 PF00364 Biotin-requiring enzyme Sfum_0461 PF00682 HMGL-like Sfum_0461 PF02436 Conserved carboxylase domain Sfum_0464 PF01145 SPFH domain / Band 7 family Sfum_0464 PF16200 C-terminal region of band_7 Sfum_0466 PF03167 Uracil DNA glycosylase superfamily Sfum_0467 PF04127 DNA / pantothenate metabolism flavoprotein Sfum_0467 PF02441 Flavoprotein Sfum_0469 PF00753 Metallo-beta-lactamase superfamily Sfum_0472 PF00005 ABC transporter Sfum_0473 PF02405 Permease MlaE Sfum_0476 PF03734 L,D-transpeptidase catalytic domain Sfum_0476 PF17969 L,D-transpeptidase C-terminal domain Sfum_0478 PF00291 Pyridoxal-phosphate dependent enzyme Sfum_0481 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Sfum_0481 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Sfum_0481 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Sfum_0481 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Sfum_0483 PF00977 Histidine biosynthesis protein Sfum_0484 PF00117 Glutamine amidotransferase class-I Sfum_0485 PF08335 GlnD PII-uridylyltransferase Sfum_0485 PF01966 HD domain Sfum_0486 PF01476 LysM domain Sfum_0486 PF05257 CHAP domain Sfum_0487 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV Sfum_0489 PF00480 ROK family Sfum_0492 PF07715 TonB-dependent Receptor Plug Domain Sfum_0492 PF00593 TonB dependent receptor Sfum_0494 PF01032 FecCD transport family Sfum_0495 PF00005 ABC transporter Sfum_0496 PF02514 CobN/Magnesium Chelatase Sfum_0497 PF17863 AAA lid domain Sfum_0497 PF01078 Magnesium chelatase, subunit ChlI Sfum_0498 PF17863 AAA lid domain Sfum_0498 PF01078 Magnesium chelatase, subunit ChlI Sfum_0498 PF13519 von Willebrand factor type A domain Sfum_0500 PF00334 Nucleoside diphosphate kinase Sfum_0501 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family Sfum_0502 PF13361 UvrD-like helicase C-terminal domain Sfum_0502 PF00580 UvrD/REP helicase N-terminal domain Sfum_0504 PF05443 ROS/MUCR transcriptional regulator protein Sfum_0509 PF01427 D-ala-D-ala dipeptidase Sfum_0510 PF13847 Methyltransferase domain Sfum_0514 PF12706 Beta-lactamase superfamily domain Sfum_0519 PF00465 Iron-containing alcohol dehydrogenase Sfum_0520 PF04199 Putative cyclase Sfum_0531 PF00483 Nucleotidyl transferase Sfum_0532 PF01636 Phosphotransferase enzyme family Sfum_0534 PF01565 FAD binding domain Sfum_0534 PF02913 FAD linked oxidases, C-terminal domain Sfum_0535 PF07075 Protein of unknown function (DUF1343) Sfum_0536 PF10502 Signal peptidase, peptidase S26 Sfum_0540 PF03958 Bacterial type II/III secretion system short domain Sfum_0540 PF07660 Secretin and TonB N terminus short domain Sfum_0540 PF11741 AMIN domain Sfum_0540 PF00263 Bacterial type II and III secretion system protein Sfum_0543 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Sfum_0545 PF02677 Epoxyqueuosine reductase QueH Sfum_0546 PF01225 Mur ligase family, catalytic domain Sfum_0546 PF08245 Mur ligase middle domain Sfum_0546 PF02875 Mur ligase family, glutamate ligase domain Sfum_0547 PF00144 Beta-lactamase Sfum_0548 PF02016 LD-carboxypeptidase N-terminal domain Sfum_0548 PF17676 LD-carboxypeptidase C-terminal domain Sfum_0549 PF03309 Type III pantothenate kinase Sfum_0550 PF00809 Pterin binding enzyme Sfum_0551 PF01434 Peptidase family M41 Sfum_0551 PF06480 FtsH Extracellular Sfum_0551 PF17862 AAA+ lid domain Sfum_0551 PF00004 ATPase family associated with various cellular activities (AAA) Sfum_0552 PF07690 Major Facilitator Superfamily Sfum_0556 PF03781 Sulfatase-modifying factor enzyme 1 Sfum_0556 PF00069 Protein kinase domain Sfum_0558 PF00211 Adenylate and Guanylate cyclase catalytic domain Sfum_0559 PF00211 Adenylate and Guanylate cyclase catalytic domain Sfum_0561 PF05746 DALR anticodon binding domain Sfum_0561 PF00750 tRNA synthetases class I (R) Sfum_0561 PF03485 Arginyl tRNA synthetase N terminal domain Sfum_0562 PF01168 Alanine racemase, N-terminal domain Sfum_0562 PF00842 Alanine racemase, C-terminal domain Sfum_0564 PF02547 Queuosine biosynthesis protein Sfum_0565 PF01702 Queuine tRNA-ribosyltransferase Sfum_0567 PF00313 'Cold-shock' DNA-binding domain Sfum_0568 PF13145 PPIC-type PPIASE domain Sfum_0570 PF02954 Bacterial regulatory protein, Fis family Sfum_0570 PF00158 Sigma-54 interaction domain Sfum_0570 PF01590 GAF domain Sfum_0572 PF02540 NAD synthase Sfum_0572 PF00795 Carbon-nitrogen hydrolase Sfum_0573 PF00543 Nitrogen regulatory protein P-II Sfum_0574 PF01966 HD domain Sfum_0574 PF08335 GlnD PII-uridylyltransferase Sfum_0576 PF00120 Glutamine synthetase, catalytic domain Sfum_0576 PF03951 Glutamine synthetase, beta-Grasp domain Sfum_0581 PF13426 PAS domain Sfum_0581 PF00512 His Kinase A (phospho-acceptor) domain Sfum_0581 PF13493 Domain of unknown function (DUF4118) Sfum_0581 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_0581 PF08447 PAS fold Sfum_0581 PF00989 PAS fold Sfum_0582 PF00196 Bacterial regulatory proteins, luxR family Sfum_0582 PF00072 Response regulator receiver domain Sfum_0583 PF00196 Bacterial regulatory proteins, luxR family Sfum_0583 PF00072 Response regulator receiver domain Sfum_0588 PF03605 Anaerobic c4-dicarboxylate membrane transporter Sfum_0589 PF00206 Lyase Sfum_0589 PF10415 Fumarase C C-terminus Sfum_0593 PF01594 AI-2E family transporter Sfum_0595 PF01592 NifU-like N terminal domain Sfum_0596 PF00117 Glutamine amidotransferase class-I Sfum_0598 PF10502 Signal peptidase, peptidase S26 Sfum_0599 PF08281 Sigma-70, region 4 Sfum_0599 PF04542 Sigma-70 region 2 Sfum_0601 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain Sfum_0601 PF01522 Polysaccharide deacetylase Sfum_0605 PF00890 FAD binding domain Sfum_0605 PF02910 Fumarate reductase flavoprotein C-term Sfum_0608 PF03916 Polysulphide reductase, NrfD Sfum_0609 PF00037 4Fe-4S binding domain Sfum_0609 PF13247 4Fe-4S dicluster domain Sfum_0610 PF01568 Molydopterin dinucleotide binding domain Sfum_0610 PF00384 Molybdopterin oxidoreductase Sfum_0611 PF02085 Class III cytochrome C family Sfum_0615 PF12727 PBP superfamily domain Sfum_0615 PF12728 Helix-turn-helix domain Sfum_0617 PF00512 His Kinase A (phospho-acceptor) domain Sfum_0617 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_0618 PF02954 Bacterial regulatory protein, Fis family Sfum_0618 PF00158 Sigma-54 interaction domain Sfum_0618 PF00072 Response regulator receiver domain Sfum_0619 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_0619 PF00512 His Kinase A (phospho-acceptor) domain Sfum_0619 PF00989 PAS fold Sfum_0620 PF00072 Response regulator receiver domain Sfum_0620 PF00158 Sigma-54 interaction domain Sfum_0620 PF02954 Bacterial regulatory protein, Fis family Sfum_0621 PF02954 Bacterial regulatory protein, Fis family Sfum_0621 PF00072 Response regulator receiver domain Sfum_0621 PF00158 Sigma-54 interaction domain Sfum_0622 PF00512 His Kinase A (phospho-acceptor) domain Sfum_0622 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_0622 PF00989 PAS fold Sfum_0623 PF08769 Sporulation initiation factor Spo0A C terminal Sfum_0623 PF00072 Response regulator receiver domain Sfum_0624 PF00582 Universal stress protein family Sfum_0626 PF01925 Sulfite exporter TauE/SafE Sfum_0630 PF00391 PEP-utilising enzyme, mobile domain Sfum_0630 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Sfum_0631 PF08448 PAS fold Sfum_0631 PF00072 Response regulator receiver domain Sfum_0631 PF13188 PAS domain Sfum_0631 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_0631 PF00512 His Kinase A (phospho-acceptor) domain Sfum_0632 PF00072 Response regulator receiver domain Sfum_0632 PF00486 Transcriptional regulatory protein, C terminal Sfum_0633 PF00158 Sigma-54 interaction domain Sfum_0633 PF00072 Response regulator receiver domain Sfum_0633 PF02954 Bacterial regulatory protein, Fis family Sfum_0636 PF00072 Response regulator receiver domain Sfum_0636 PF00486 Transcriptional regulatory protein, C terminal Sfum_0638 PF01925 Sulfite exporter TauE/SafE Sfum_0640 PF01566 Natural resistance-associated macrophage protein Sfum_0641 PF00582 Universal stress protein family Sfum_0642 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_0642 PF00512 His Kinase A (phospho-acceptor) domain Sfum_0643 PF00158 Sigma-54 interaction domain Sfum_0643 PF00072 Response regulator receiver domain Sfum_0643 PF02954 Bacterial regulatory protein, Fis family Sfum_0646 PF00582 Universal stress protein family Sfum_0648 PF02954 Bacterial regulatory protein, Fis family Sfum_0648 PF00072 Response regulator receiver domain Sfum_0648 PF00158 Sigma-54 interaction domain Sfum_0649 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Sfum_0649 PF00391 PEP-utilising enzyme, mobile domain Sfum_0649 PF02896 PEP-utilising enzyme, TIM barrel domain Sfum_0651 PF13188 PAS domain Sfum_0651 PF00072 Response regulator receiver domain Sfum_0651 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_0651 PF08448 PAS fold Sfum_0651 PF00512 His Kinase A (phospho-acceptor) domain Sfum_0652 PF00072 Response regulator receiver domain Sfum_0652 PF00486 Transcriptional regulatory protein, C terminal Sfum_0654 PF00072 Response regulator receiver domain Sfum_0656 PF00072 Response regulator receiver domain Sfum_0657 PF00486 Transcriptional regulatory protein, C terminal Sfum_0657 PF00072 Response regulator receiver domain Sfum_0659 PF01261 Xylose isomerase-like TIM barrel Sfum_0660 PF00206 Lyase Sfum_0660 PF10397 Adenylosuccinate lyase C-terminus Sfum_0661 PF02633 Creatinine amidohydrolase Sfum_0665 PF01965 DJ-1/PfpI family Sfum_0666 PF01061 ABC-2 type transporter Sfum_0667 PF00005 ABC transporter Sfum_0668 PF00360 Phytochrome region Sfum_0668 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_0668 PF01590 GAF domain Sfum_0668 PF00512 His Kinase A (phospho-acceptor) domain Sfum_0668 PF08446 PAS fold Sfum_0674 PF00144 Beta-lactamase Sfum_0676 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Sfum_0676 PF00289 Biotin carboxylase, N-terminal domain Sfum_0676 PF02785 Biotin carboxylase C-terminal domain Sfum_0678 PF00589 Phage integrase family Sfum_0678 PF02899 Phage integrase, N-terminal SAM-like domain Sfum_0679 PF12627 Probable RNA and SrmB- binding site of polymerase A Sfum_0679 PF01743 Poly A polymerase head domain Sfum_0679 PF01966 HD domain Sfum_0681 PF02163 Peptidase family M50 Sfum_0682 PF00579 tRNA synthetases class I (W and Y) Sfum_0683 PF01479 S4 domain Sfum_0683 PF00849 RNA pseudouridylate synthase Sfum_0685 PF03793 PASTA domain Sfum_0685 PF00069 Protein kinase domain Sfum_0686 PF07690 Major Facilitator Superfamily Sfum_0688 PF11871 Domain of unknown function (DUF3391) Sfum_0688 PF01966 HD domain Sfum_0689 PF00301 Rubredoxin Sfum_0691 PF01725 Ham1 family Sfum_0692 PF00902 Sec-independent protein translocase protein (TatC) Sfum_0693 PF02416 mttA/Hcf106 family Sfum_0695 PF01578 Cytochrome C assembly protein Sfum_0696 PF05140 ResB-like family Sfum_0698 PF07992 Pyridine nucleotide-disulphide oxidoreductase Sfum_0698 PF00085 Thioredoxin Sfum_0699 PF01212 Beta-eliminating lyase Sfum_0700 PF01895 PhoU domain Sfum_0701 PF00005 ABC transporter Sfum_0702 PF00005 ABC transporter Sfum_0703 PF00528 Binding-protein-dependent transport system inner membrane component Sfum_0704 PF00528 Binding-protein-dependent transport system inner membrane component Sfum_0705 PF12849 PBP superfamily domain Sfum_0706 PF16736 Single Cache-like Sfum_0706 PF00989 PAS fold Sfum_0706 PF00512 His Kinase A (phospho-acceptor) domain Sfum_0706 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_0707 PF00486 Transcriptional regulatory protein, C terminal Sfum_0707 PF00072 Response regulator receiver domain Sfum_0708 PF00583 Acetyltransferase (GNAT) family Sfum_0708 PF13380 CoA binding domain Sfum_0708 PF13607 Succinyl-CoA ligase like flavodoxin domain Sfum_0711 PF12544 Lysine-2,3-aminomutase Sfum_0711 PF04055 Radical SAM superfamily Sfum_0712 PF07478 D-ala D-ala ligase C-terminus Sfum_0712 PF01820 D-ala D-ala ligase N-terminus Sfum_0713 PF07478 D-ala D-ala ligase C-terminus Sfum_0715 PF02190 ATP-dependent protease La (LON) substrate-binding domain Sfum_0715 PF05362 Lon protease (S16) C-terminal proteolytic domain Sfum_0715 PF00004 ATPase family associated with various cellular activities (AAA) Sfum_0716 PF01171 PP-loop family Sfum_0718 PF01513 ATP-NAD kinase Sfum_0719 PF05230 MASE2 domain Sfum_0719 PF00990 Diguanylate cyclase, GGDEF domain Sfum_0720 PF02675 S-adenosylmethionine decarboxylase Sfum_0721 PF00491 Arginase family Sfum_0722 PF03471 Transporter associated domain Sfum_0722 PF00571 CBS domain Sfum_0723 PF00795 Carbon-nitrogen hydrolase Sfum_0724 PF00472 RF-1 domain Sfum_0724 PF03462 PCRF domain Sfum_0725 PF02673 Bacitracin resistance protein BacA Sfum_0726 PF00543 Nitrogen regulatory protein P-II Sfum_0727 PF00909 Ammonium Transporter Family Sfum_0728 PF08206 Ribonuclease B OB domain Sfum_0728 PF00773 RNB domain Sfum_0728 PF00575 S1 RNA binding domain Sfum_0728 PF17876 Cold shock domain Sfum_0729 PF11741 AMIN domain Sfum_0729 PF01520 N-acetylmuramoyl-L-alanine amidase Sfum_0730 PF01624 MutS domain I Sfum_0730 PF05192 MutS domain III Sfum_0730 PF05190 MutS family domain IV Sfum_0730 PF00488 MutS domain V Sfum_0730 PF05188 MutS domain II Sfum_0731 PF17760 UvrA interaction domain Sfum_0731 PF17755 UvrA DNA-binding domain Sfum_0731 PF00005 ABC transporter Sfum_0733 PF00313 'Cold-shock' DNA-binding domain Sfum_0735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_0735 PF00512 His Kinase A (phospho-acceptor) domain Sfum_0736 PF00291 Pyridoxal-phosphate dependent enzyme Sfum_0736 PF13291 ACT domain Sfum_0738 PF11799 impB/mucB/samB family C-terminal domain Sfum_0738 PF00817 impB/mucB/samB family Sfum_0738 PF11798 IMS family HHH motif Sfum_0739 PF01433 Peptidase family M1 domain Sfum_0739 PF17432 Domain of unknown function (DUF3458_C) ARM repeats Sfum_0739 PF11940 Domain of unknown function (DUF3458) Ig-like fold Sfum_0741 PF00149 Calcineurin-like phosphoesterase Sfum_0741 PF02872 5'-nucleotidase, C-terminal domain Sfum_0744 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Sfum_0744 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Sfum_0744 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Sfum_0744 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Sfum_0745 PF13193 AMP-binding enzyme C-terminal domain Sfum_0745 PF00501 AMP-binding enzyme Sfum_0745 PF16177 Acetyl-coenzyme A synthetase N-terminus Sfum_0746 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain Sfum_0746 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain Sfum_0748 PF01464 Transglycosylase SLT domain Sfum_0750 PF01476 LysM domain Sfum_0750 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase Sfum_0751 PF02146 Sir2 family Sfum_0752 PF01618 MotA/TolQ/ExbB proton channel family Sfum_0753 PF02472 Biopolymer transport protein ExbD/TolR Sfum_0755 PF07676 WD40-like Beta Propeller Repeat Sfum_0755 PF04052 TolB amino-terminal domain Sfum_0756 PF00691 OmpA family Sfum_0758 PF07244 Surface antigen variable number repeat Sfum_0758 PF01103 Surface antigen Sfum_0761 PF01925 Sulfite exporter TauE/SafE Sfum_0763 PF00873 AcrB/AcrD/AcrF family Sfum_0766 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain Sfum_0766 PF00437 Type II/IV secretion system protein Sfum_0767 PF00149 Calcineurin-like phosphoesterase Sfum_0769 PF00591 Glycosyl transferase family, a/b domain Sfum_0769 PF02885 Glycosyl transferase family, helical bundle domain Sfum_0770 PF08240 Alcohol dehydrogenase GroES-like domain Sfum_0770 PF00107 Zinc-binding dehydrogenase Sfum_0771 PF01668 SmpB protein Sfum_0772 PF02896 PEP-utilising enzyme, TIM barrel domain Sfum_0772 PF00391 PEP-utilising enzyme, mobile domain Sfum_0772 PF05524 PEP-utilising enzyme, N-terminal Sfum_0773 PF00381 PTS HPr component phosphorylation site Sfum_0781 PF03062 MBOAT, membrane-bound O-acyltransferase family Sfum_0789 PF13614 AAA domain Sfum_0789 PF13807 G-rich domain on putative tyrosine kinase Sfum_0789 PF02706 Chain length determinant protein Sfum_0791 PF13579 Glycosyl transferase 4-like domain Sfum_0793 PF02397 Bacterial sugar transferase Sfum_0794 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Sfum_0798 PF00488 MutS domain V Sfum_0798 PF01713 Smr domain Sfum_0800 PF00294 pfkB family carbohydrate kinase Sfum_0801 PF02151 UvrB/uvrC motif Sfum_0801 PF04851 Type III restriction enzyme, res subunit Sfum_0801 PF17757 UvrB interaction domain Sfum_0801 PF12344 Ultra-violet resistance protein B Sfum_0801 PF00271 Helicase conserved C-terminal domain Sfum_0803 PF16363 GDP-mannose 4,6 dehydratase Sfum_0805 PF03741 Integral membrane protein TerC family Sfum_0807 PF01752 Collagenase Sfum_0807 PF08453 Peptidase family M9 N-terminal Sfum_0809 PF01144 Coenzyme A transferase Sfum_0810 PF01144 Coenzyme A transferase Sfum_0811 PF01144 Coenzyme A transferase Sfum_0813 PF01546 Peptidase family M20/M25/M40 Sfum_0813 PF07687 Peptidase dimerisation domain Sfum_0814 PF00497 Bacterial extracellular solute-binding proteins, family 3 Sfum_0815 PF00528 Binding-protein-dependent transport system inner membrane component Sfum_0817 PF00005 ABC transporter Sfum_0819 PF02754 Cysteine-rich domain Sfum_0821 PF00158 Sigma-54 interaction domain Sfum_0821 PF02954 Bacterial regulatory protein, Fis family Sfum_0821 PF00072 Response regulator receiver domain Sfum_0824 PF07992 Pyridine nucleotide-disulphide oxidoreductase Sfum_0824 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Sfum_0824 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Sfum_0826 PF00072 Response regulator receiver domain Sfum_0826 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_0826 PF08448 PAS fold Sfum_0826 PF13188 PAS domain Sfum_0826 PF00512 His Kinase A (phospho-acceptor) domain Sfum_0827 PF02954 Bacterial regulatory protein, Fis family Sfum_0827 PF00072 Response regulator receiver domain Sfum_0827 PF00158 Sigma-54 interaction domain Sfum_0828 PF08448 PAS fold Sfum_0828 PF13426 PAS domain Sfum_0828 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_0828 PF00072 Response regulator receiver domain Sfum_0828 PF00512 His Kinase A (phospho-acceptor) domain Sfum_0829 PF08240 Alcohol dehydrogenase GroES-like domain Sfum_0833 PF00171 Aldehyde dehydrogenase family Sfum_0834 PF13458 Periplasmic binding protein Sfum_0835 PF02653 Branched-chain amino acid transport system / permease component Sfum_0836 PF11862 Domain of unknown function (DUF3382) Sfum_0836 PF02653 Branched-chain amino acid transport system / permease component Sfum_0837 PF00005 ABC transporter Sfum_0837 PF12399 Branched-chain amino acid ATP-binding cassette transporter Sfum_0838 PF00005 ABC transporter Sfum_0841 PF06968 Biotin and Thiamin Synthesis associated domain Sfum_0841 PF04055 Radical SAM superfamily Sfum_0844 PF02256 Iron hydrogenase small subunit Sfum_0844 PF02906 Iron only hydrogenase large subunit, C-terminal domain Sfum_0844 PF00037 4Fe-4S binding domain Sfum_0844 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Sfum_0845 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Sfum_0845 PF00037 4Fe-4S binding domain Sfum_0845 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Sfum_0847 PF02256 Iron hydrogenase small subunit Sfum_0848 PF02906 Iron only hydrogenase large subunit, C-terminal domain Sfum_0848 PF00037 4Fe-4S binding domain Sfum_0852 PF00075 RNase H Sfum_0853 PF00158 Sigma-54 interaction domain Sfum_0853 PF00072 Response regulator receiver domain Sfum_0853 PF02954 Bacterial regulatory protein, Fis family Sfum_0854 PF13426 PAS domain Sfum_0854 PF00989 PAS fold Sfum_0854 PF00512 His Kinase A (phospho-acceptor) domain Sfum_0854 PF13188 PAS domain Sfum_0854 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_0855 PF12002 MgsA AAA+ ATPase C terminal Sfum_0855 PF16193 AAA C-terminal domain Sfum_0855 PF00004 ATPase family associated with various cellular activities (AAA) Sfum_0856 PF00005 ABC transporter Sfum_0857 PF00005 ABC transporter Sfum_0857 PF12399 Branched-chain amino acid ATP-binding cassette transporter Sfum_0858 PF02653 Branched-chain amino acid transport system / permease component Sfum_0858 PF11862 Domain of unknown function (DUF3382) Sfum_0861 PF02653 Branched-chain amino acid transport system / permease component Sfum_0864 PF01370 NAD dependent epimerase/dehydratase family Sfum_0867 PF01048 Phosphorylase superfamily Sfum_0868 PF03009 Glycerophosphoryl diester phosphodiesterase family Sfum_0870 PF13193 AMP-binding enzyme C-terminal domain Sfum_0870 PF00501 AMP-binding enzyme Sfum_0874 PF07650 KH domain Sfum_0874 PF01926 50S ribosome-binding GTPase Sfum_0876 PF14622 Ribonuclease-III-like Sfum_0876 PF00035 Double-stranded RNA binding motif Sfum_0884 PF13401 AAA domain Sfum_0884 PF01471 Putative peptidoglycan binding domain Sfum_0892 PF01638 HxlR-like helix-turn-helix Sfum_0896 PF03466 LysR substrate binding domain Sfum_0896 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Sfum_0901 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain Sfum_0901 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain Sfum_0909 PF04055 Radical SAM superfamily Sfum_0909 PF02310 B12 binding domain Sfum_0910 PF01244 Membrane dipeptidase (Peptidase family M19) Sfum_0911 PF00266 Aminotransferase class-V Sfum_0912 PF01027 Inhibitor of apoptosis-promoting Bax1 Sfum_0915 PF05908 Poly-gamma-glutamate hydrolase Sfum_0918 PF12146 Serine aminopeptidase, S33 Sfum_0926 PF00892 EamA-like transporter family Sfum_0927 PF01726 LexA DNA binding domain Sfum_0927 PF00717 Peptidase S24-like Sfum_0928 PF11798 IMS family HHH motif Sfum_0928 PF11799 impB/mucB/samB family C-terminal domain Sfum_0928 PF00817 impB/mucB/samB family Sfum_0929 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Sfum_0929 PF14579 Helix-hairpin-helix motif Sfum_0929 PF02811 PHP domain Sfum_0929 PF07733 Bacterial DNA polymerase III alpha NTPase domain Sfum_0933 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Sfum_0933 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Sfum_0934 PF02502 Ribose/Galactose Isomerase Sfum_0935 PF00571 CBS domain Sfum_0936 PF00850 Histone deacetylase domain Sfum_0938 PF01557 Fumarylacetoacetate (FAA) hydrolase family Sfum_0942 PF08447 PAS fold Sfum_0942 PF13426 PAS domain Sfum_0942 PF00512 His Kinase A (phospho-acceptor) domain Sfum_0942 PF13493 Domain of unknown function (DUF4118) Sfum_0942 PF00989 PAS fold Sfum_0942 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_0943 PF00072 Response regulator receiver domain Sfum_0943 PF00196 Bacterial regulatory proteins, luxR family Sfum_0944 PF00072 Response regulator receiver domain Sfum_0944 PF00196 Bacterial regulatory proteins, luxR family Sfum_0947 PF00486 Transcriptional regulatory protein, C terminal Sfum_0947 PF00072 Response regulator receiver domain Sfum_0948 PF02954 Bacterial regulatory protein, Fis family Sfum_0948 PF00072 Response regulator receiver domain Sfum_0948 PF00158 Sigma-54 interaction domain Sfum_0957 PF08241 Methyltransferase domain Sfum_0958 PF01820 D-ala D-ala ligase N-terminus Sfum_0958 PF07478 D-ala D-ala ligase C-terminus Sfum_0962 PF00535 Glycosyl transferase family 2 Sfum_0967 PF00535 Glycosyl transferase family 2 Sfum_0969 PF00534 Glycosyl transferases group 1 Sfum_0969 PF09318 Glycosyl transferase 1 domain A Sfum_0972 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Sfum_0975 PF02397 Bacterial sugar transferase Sfum_0977 PF13401 AAA domain Sfum_0977 PF01471 Putative peptidoglycan binding domain Sfum_0979 PF02563 Polysaccharide biosynthesis/export protein Sfum_0979 PF10531 SLBB domain Sfum_0983 PF04607 Region found in RelA / SpoT proteins Sfum_0983 PF13291 ACT domain Sfum_0983 PF02824 TGS domain Sfum_0984 PF13180 PDZ domain Sfum_0986 PF13686 DsrE/DsrF/DrsH-like family Sfum_0989 PF01546 Peptidase family M20/M25/M40 Sfum_0989 PF07687 Peptidase dimerisation domain Sfum_0993 PF17864 RuvB AAA lid domain Sfum_0993 PF05491 RuvB C-terminal winged helix domain Sfum_0993 PF05496 Holliday junction DNA helicase RuvB P-loop domain Sfum_0994 PF01330 RuvA N terminal domain Sfum_0994 PF07499 RuvA, C-terminal domain Sfum_0995 PF02075 Crossover junction endodeoxyribonuclease RuvC Sfum_0996 PF01709 Transcriptional regulator Sfum_0997 PF01728 FtsJ-like methyltransferase Sfum_0998 PF01661 Macro domain Sfum_1003 PF01568 Molydopterin dinucleotide binding domain Sfum_1003 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Sfum_1003 PF00384 Molybdopterin oxidoreductase Sfum_1003 PF10518 TAT (twin-arginine translocation) pathway signal sequence Sfum_1004 PF12704 MacB-like periplasmic core domain Sfum_1004 PF02687 FtsX-like permease family Sfum_1004 PF00005 ABC transporter Sfum_1005 PF00005 ABC transporter Sfum_1005 PF02687 FtsX-like permease family Sfum_1005 PF12704 MacB-like periplasmic core domain Sfum_1007 PF08448 PAS fold Sfum_1007 PF00072 Response regulator receiver domain Sfum_1007 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_1007 PF13188 PAS domain Sfum_1007 PF00512 His Kinase A (phospho-acceptor) domain Sfum_1009 PF00682 HMGL-like Sfum_1010 PF00158 Sigma-54 interaction domain Sfum_1010 PF02954 Bacterial regulatory protein, Fis family Sfum_1010 PF01590 GAF domain Sfum_1011 PF04055 Radical SAM superfamily Sfum_1011 PF02579 Dinitrogenase iron-molybdenum cofactor Sfum_1012 PF00148 Nitrogenase component 1 type Oxidoreductase Sfum_1013 PF00148 Nitrogenase component 1 type Oxidoreductase Sfum_1015 PF00148 Nitrogenase component 1 type Oxidoreductase Sfum_1016 PF00148 Nitrogenase component 1 type Oxidoreductase Sfum_1017 PF00543 Nitrogen regulatory protein P-II Sfum_1019 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family Sfum_1020 PF00563 EAL domain Sfum_1020 PF00990 Diguanylate cyclase, GGDEF domain Sfum_1020 PF03707 Bacterial signalling protein N terminal repeat Sfum_1024 PF01933 Uncharacterised protein family UPF0052 Sfum_1025 PF01862 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) Sfum_1031 PF13401 AAA domain Sfum_1031 PF01471 Putative peptidoglycan binding domain Sfum_1033 PF03023 Lipid II flippase MurJ Sfum_1034 PF01628 HrcA protein C terminal domain Sfum_1035 PF01025 GrpE Sfum_1036 PF00012 Hsp70 protein Sfum_1037 PF13458 Periplasmic binding protein Sfum_1039 PF12557 Cob(I)alamin adenosyltransferase N terminal Sfum_1039 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP Sfum_1040 PF03167 Uracil DNA glycosylase superfamily Sfum_1044 PF14492 Elongation Factor G, domain II Sfum_1044 PF03764 Elongation factor G, domain IV Sfum_1044 PF00009 Elongation factor Tu GTP binding domain Sfum_1044 PF03144 Elongation factor Tu domain 2 Sfum_1044 PF00679 Elongation factor G C-terminus Sfum_1046 PF01747 ATP-sulfurylase Sfum_1046 PF14306 PUA-like domain Sfum_1047 PF12139 Adenosine-5'-phosphosulfate reductase beta subunit Sfum_1047 PF13187 4Fe-4S dicluster domain Sfum_1048 PF00890 FAD binding domain Sfum_1049 PF01593 Flavin containing amine oxidoreductase Sfum_1050 PF01593 Flavin containing amine oxidoreductase Sfum_1051 PF13183 4Fe-4S dicluster domain Sfum_1051 PF02754 Cysteine-rich domain Sfum_1058 PF00795 Carbon-nitrogen hydrolase Sfum_1060 PF02540 NAD synthase Sfum_1062 PF00730 HhH-GPD superfamily base excision DNA repair protein Sfum_1062 PF00633 Helix-hairpin-helix motif Sfum_1064 PF00156 Phosphoribosyl transferase domain Sfum_1073 PF08903 Domain of unknown function (DUF1846) Sfum_1074 PF13533 Biotin-lipoyl like Sfum_1075 PF00873 AcrB/AcrD/AcrF family Sfum_1076 PF00873 AcrB/AcrD/AcrF family Sfum_1077 PF02321 Outer membrane efflux protein Sfum_1079 PF12800 4Fe-4S binding domain Sfum_1079 PF13247 4Fe-4S dicluster domain Sfum_1080 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain Sfum_1080 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 Sfum_1082 PF00005 ABC transporter Sfum_1082 PF02687 FtsX-like permease family Sfum_1082 PF12704 MacB-like periplasmic core domain Sfum_1083 PF00005 ABC transporter Sfum_1083 PF12704 MacB-like periplasmic core domain Sfum_1083 PF02687 FtsX-like permease family Sfum_1084 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Sfum_1085 PF02321 Outer membrane efflux protein Sfum_1086 PF08361 MAATS-type transcriptional repressor, C-terminal region Sfum_1086 PF00440 Bacterial regulatory proteins, tetR family Sfum_1087 PF00171 Aldehyde dehydrogenase family Sfum_1093 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) Sfum_1095 PF00207 Alpha-2-macroglobulin family Sfum_1095 PF07703 Alpha-2-macroglobulin bait region domain Sfum_1095 PF01835 MG2 domain Sfum_1097 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 Sfum_1099 PF03706 Lysylphosphatidylglycerol synthase TM region Sfum_1099 PF09924 Uncharacterised conserved protein (DUF2156) Sfum_1101 PF06180 Cobalt chelatase (CbiK) Sfum_1103 PF00005 ABC transporter Sfum_1105 PF01522 Polysaccharide deacetylase Sfum_1106 PF13439 Glycosyltransferase Family 4 Sfum_1106 PF00534 Glycosyl transferases group 1 Sfum_1111 PF00589 Phage integrase family Sfum_1119 PF00690 Cation transporter/ATPase, N-terminus Sfum_1119 PF00689 Cation transporting ATPase, C-terminus Sfum_1120 PF13426 PAS domain Sfum_1120 PF08448 PAS fold Sfum_1120 PF00512 His Kinase A (phospho-acceptor) domain Sfum_1120 PF00072 Response regulator receiver domain Sfum_1120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_1121 PF00501 AMP-binding enzyme Sfum_1121 PF13193 AMP-binding enzyme C-terminal domain Sfum_1131 PF03062 MBOAT, membrane-bound O-acyltransferase family Sfum_1132 PF01144 Coenzyme A transferase Sfum_1134 PF01144 Coenzyme A transferase Sfum_1138 PF00753 Metallo-beta-lactamase superfamily Sfum_1140 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Sfum_1144 PF03781 Sulfatase-modifying factor enzyme 1 Sfum_1149 PF00037 4Fe-4S binding domain Sfum_1149 PF13247 4Fe-4S dicluster domain Sfum_1151 PF00691 OmpA family Sfum_1152 PF02527 rRNA small subunit methyltransferase G Sfum_1152 PF00588 SpoU rRNA Methylase family Sfum_1153 PF00849 RNA pseudouridylate synthase Sfum_1153 PF01479 S4 domain Sfum_1155 PF02308 MgtC family Sfum_1160 PF00158 Sigma-54 interaction domain Sfum_1160 PF00072 Response regulator receiver domain Sfum_1160 PF02954 Bacterial regulatory protein, Fis family Sfum_1163 PF01144 Coenzyme A transferase Sfum_1164 PF00158 Sigma-54 interaction domain Sfum_1164 PF00989 PAS fold Sfum_1164 PF02954 Bacterial regulatory protein, Fis family Sfum_1166 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Sfum_1166 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Sfum_1166 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II Sfum_1167 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Sfum_1169 PF01975 Survival protein SurE Sfum_1171 PF00155 Aminotransferase class I and II Sfum_1172 PF01593 Flavin containing amine oxidoreductase Sfum_1177 PF07992 Pyridine nucleotide-disulphide oxidoreductase Sfum_1179 PF04324 BFD-like [2Fe-2S] binding domain Sfum_1179 PF07992 Pyridine nucleotide-disulphide oxidoreductase Sfum_1181 PF07992 Pyridine nucleotide-disulphide oxidoreductase Sfum_1181 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Sfum_1181 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Sfum_1184 PF00211 Adenylate and Guanylate cyclase catalytic domain Sfum_1185 PF00551 Formyl transferase Sfum_1187 PF07411 Domain of unknown function (DUF1508) Sfum_1190 PF01209 ubiE/COQ5 methyltransferase family Sfum_1192 PF13188 PAS domain Sfum_1192 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_1192 PF00512 His Kinase A (phospho-acceptor) domain Sfum_1192 PF08448 PAS fold Sfum_1192 PF00072 Response regulator receiver domain Sfum_1198 PF11897 Protein of unknown function (DUF3417) Sfum_1198 PF00343 Carbohydrate phosphorylase Sfum_1201 PF01960 ArgJ family Sfum_1202 PF07517 SecA DEAD-like domain Sfum_1202 PF02810 SEC-C motif Sfum_1202 PF01043 SecA preprotein cross-linking domain Sfum_1202 PF07516 SecA Wing and Scaffold domain Sfum_1204 PF00266 Aminotransferase class-V Sfum_1205 PF02634 FdhD/NarQ family Sfum_1206 PF00293 NUDIX domain Sfum_1206 PF09297 NADH pyrophosphatase zinc ribbon domain Sfum_1207 PF00860 Permease family Sfum_1208 PF14572 Phosphoribosyl synthetase-associated domain Sfum_1208 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase Sfum_1210 PF01784 NIF3 (NGG1p interacting factor 3) Sfum_1212 PF04539 Sigma-70 region 3 Sfum_1212 PF04546 Sigma-70, non-essential region Sfum_1212 PF03979 Sigma-70 factor, region 1.1 Sfum_1212 PF00140 Sigma-70 factor, region 1.2 Sfum_1212 PF04542 Sigma-70 region 2 Sfum_1212 PF04545 Sigma-70, region 4 Sfum_1213 PF08275 DNA primase catalytic core, N-terminal domain Sfum_1213 PF10410 DnaB-helicase binding domain of primase Sfum_1213 PF01807 CHC2 zinc finger Sfum_1214 PF09424 Yqey-like protein Sfum_1215 PF00977 Histidine biosynthesis protein Sfum_1217 PF01676 Metalloenzyme superfamily Sfum_1217 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase Sfum_1218 PF01842 ACT domain Sfum_1218 PF03447 Homoserine dehydrogenase, NAD binding domain Sfum_1218 PF00742 Homoserine dehydrogenase Sfum_1219 PF00155 Aminotransferase class I and II Sfum_1220 PF09106 Elongation factor SelB, winged helix Sfum_1220 PF03144 Elongation factor Tu domain 2 Sfum_1220 PF00009 Elongation factor Tu GTP binding domain Sfum_1220 PF09107 Elongation factor SelB, winged helix Sfum_1222 PF01546 Peptidase family M20/M25/M40 Sfum_1222 PF07687 Peptidase dimerisation domain Sfum_1223 PF01039 Carboxyl transferase domain Sfum_1225 PF02811 PHP domain Sfum_1225 PF14579 Helix-hairpin-helix motif Sfum_1225 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Sfum_1225 PF07733 Bacterial DNA polymerase III alpha NTPase domain Sfum_1226 PF17384 RimP C-terminal SH3 domain Sfum_1226 PF02576 RimP N-terminal domain Sfum_1227 PF13184 NusA-like KH domain Sfum_1227 PF08529 NusA N-terminal domain Sfum_1227 PF00575 S1 RNA binding domain Sfum_1228 PF00009 Elongation factor Tu GTP binding domain Sfum_1228 PF11987 Translation-initiation factor 2 Sfum_1228 PF04760 Translation initiation factor IF-2, N-terminal region Sfum_1230 PF02033 Ribosome-binding factor A Sfum_1231 PF01368 DHH family Sfum_1231 PF02272 DHHA1 domain Sfum_1232 PF01509 TruB family pseudouridylate synthase (N terminal domain) Sfum_1232 PF16198 tRNA pseudouridylate synthase B C-terminal domain Sfum_1233 PF00312 Ribosomal protein S15 Sfum_1234 PF00013 KH domain Sfum_1234 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Sfum_1234 PF01138 3' exoribonuclease family, domain 1 Sfum_1234 PF03725 3' exoribonuclease family, domain 2 Sfum_1234 PF00575 S1 RNA binding domain Sfum_1235 PF00675 Insulinase (Peptidase family M16) Sfum_1235 PF05193 Peptidase M16 inactive domain Sfum_1236 PF00753 Metallo-beta-lactamase superfamily Sfum_1238 PF02355 Protein export membrane protein Sfum_1238 PF07549 SecD/SecF GG Motif Sfum_1239 PF02355 Protein export membrane protein Sfum_1239 PF07549 SecD/SecF GG Motif Sfum_1246 PF00459 Inositol monophosphatase family Sfum_1247 PF00149 Calcineurin-like phosphoesterase Sfum_1254 PF11066 Protein of unknown function (DUF2867) Sfum_1254 PF13460 NAD(P)H-binding Sfum_1260 PF02770 Acyl-CoA dehydrogenase, middle domain Sfum_1260 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Sfum_1260 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Sfum_1263 PF01259 SAICAR synthetase Sfum_1265 PF01171 PP-loop family Sfum_1265 PF11734 TilS substrate C-terminal domain Sfum_1267 PF04073 Aminoacyl-tRNA editing domain Sfum_1267 PF03129 Anticodon binding domain Sfum_1267 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Sfum_1268 PF00011 Hsp20/alpha crystallin family Sfum_1269 PF01435 Peptidase family M48 Sfum_1271 PF00709 Adenylosuccinate synthetase Sfum_1273 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Sfum_1273 PF00384 Molybdopterin oxidoreductase Sfum_1273 PF01568 Molydopterin dinucleotide binding domain Sfum_1274 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Sfum_1274 PF01568 Molydopterin dinucleotide binding domain Sfum_1274 PF00384 Molybdopterin oxidoreductase Sfum_1275 PF13247 4Fe-4S dicluster domain Sfum_1278 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain Sfum_1278 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain Sfum_1281 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Sfum_1282 PF03776 Septum formation topological specificity factor MinE Sfum_1283 PF02811 PHP domain Sfum_1283 PF14579 Helix-hairpin-helix motif Sfum_1283 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Sfum_1283 PF07733 Bacterial DNA polymerase III alpha NTPase domain Sfum_1286 PF01593 Flavin containing amine oxidoreductase Sfum_1287 PF01593 Flavin containing amine oxidoreductase Sfum_1288 PF02646 RmuC family Sfum_1289 PF13380 CoA binding domain Sfum_1291 PF02082 Transcriptional regulator Sfum_1293 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Sfum_1297 PF00588 SpoU rRNA Methylase family Sfum_1298 PF01875 Memo-like protein Sfum_1299 PF01871 AMMECR1 Sfum_1302 PF02779 Transketolase, pyrimidine binding domain Sfum_1302 PF00456 Transketolase, thiamine diphosphate binding domain Sfum_1302 PF02780 Transketolase, C-terminal domain Sfum_1303 PF10609 NUBPL iron-transfer P-loop NTPase Sfum_1305 PF00768 D-alanyl-D-alanine carboxypeptidase Sfum_1305 PF07943 Penicillin-binding protein 5, C-terminal domain Sfum_1307 PF04389 Peptidase family M28 Sfum_1309 PF00171 Aldehyde dehydrogenase family Sfum_1310 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Sfum_1310 PF00111 2Fe-2S iron-sulfur cluster binding domain Sfum_1310 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Sfum_1310 PF01799 [2Fe-2S] binding domain Sfum_1311 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Sfum_1311 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Sfum_1311 PF07992 Pyridine nucleotide-disulphide oxidoreductase Sfum_1312 PF08241 Methyltransferase domain Sfum_1314 PF06463 Molybdenum Cofactor Synthesis C Sfum_1314 PF04055 Radical SAM superfamily Sfum_1315 PF00501 AMP-binding enzyme Sfum_1315 PF14535 AMP-binding enzyme C-terminal domain Sfum_1316 PF13478 XdhC Rossmann domain Sfum_1316 PF02625 XdhC and CoxI family Sfum_1317 PF00132 Bacterial transferase hexapeptide (six repeats) Sfum_1317 PF12804 MobA-like NTP transferase domain Sfum_1318 PF10518 TAT (twin-arginine translocation) pathway signal sequence Sfum_1318 PF01568 Molydopterin dinucleotide binding domain Sfum_1318 PF00384 Molybdopterin oxidoreductase Sfum_1318 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Sfum_1322 PF00145 C-5 cytosine-specific DNA methylase Sfum_1327 PF04542 Sigma-70 region 2 Sfum_1327 PF08281 Sigma-70, region 4 Sfum_1328 PF00248 Aldo/keto reductase family Sfum_1329 PF12801 4Fe-4S binding domain Sfum_1332 PF17284 Spermidine synthase tetramerisation domain Sfum_1337 PF08448 PAS fold Sfum_1337 PF00512 His Kinase A (phospho-acceptor) domain Sfum_1337 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_1337 PF13188 PAS domain Sfum_1337 PF00072 Response regulator receiver domain Sfum_1338 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Sfum_1339 PF02515 CoA-transferase family III Sfum_1340 PF02515 CoA-transferase family III Sfum_1345 PF03787 RAMP superfamily Sfum_1347 PF03787 RAMP superfamily Sfum_1349 PF18211 Csm1 subunit domain B Sfum_1349 PF01966 HD domain Sfum_1355 PF01867 CRISPR associated protein Cas1 Sfum_1356 PF09827 CRISPR associated protein Cas2 Sfum_1359 PF00501 AMP-binding enzyme Sfum_1359 PF13193 AMP-binding enzyme C-terminal domain Sfum_1360 PF04055 Radical SAM superfamily Sfum_1361 PF06421 GTP-binding protein LepA C-terminus Sfum_1361 PF00679 Elongation factor G C-terminus Sfum_1361 PF00009 Elongation factor Tu GTP binding domain Sfum_1361 PF03144 Elongation factor Tu domain 2 Sfum_1366 PF00749 tRNA synthetases class I (E and Q), catalytic domain Sfum_1369 PF01783 Ribosomal L32p protein family Sfum_1370 PF02504 Fatty acid synthesis protein Sfum_1371 PF02770 Acyl-CoA dehydrogenase, middle domain Sfum_1371 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Sfum_1371 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Sfum_1372 PF01012 Electron transfer flavoprotein domain Sfum_1373 PF00766 Electron transfer flavoprotein FAD-binding domain Sfum_1373 PF01012 Electron transfer flavoprotein domain Sfum_1375 PF00109 Beta-ketoacyl synthase, N-terminal domain Sfum_1375 PF02801 Beta-ketoacyl synthase, C-terminal domain Sfum_1376 PF02502 Ribose/Galactose Isomerase Sfum_1377 PF00464 Serine hydroxymethyltransferase Sfum_1378 PF01872 RibD C-terminal domain Sfum_1378 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Sfum_1379 PF00677 Lumazine binding domain Sfum_1380 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Sfum_1380 PF00925 GTP cyclohydrolase II Sfum_1381 PF00885 6,7-dimethyl-8-ribityllumazine synthase Sfum_1382 PF01029 NusB family Sfum_1383 PF10609 NUBPL iron-transfer P-loop NTPase Sfum_1384 PF04545 Sigma-70, region 4 Sfum_1384 PF04539 Sigma-70 region 3 Sfum_1384 PF04542 Sigma-70 region 2 Sfum_1388 PF01435 Peptidase family M48 Sfum_1388 PF16491 CAAX prenyl protease N-terminal, five membrane helices Sfum_1390 PF00664 ABC transporter transmembrane region Sfum_1390 PF00005 ABC transporter Sfum_1391 PF00005 ABC transporter Sfum_1391 PF00664 ABC transporter transmembrane region Sfum_1393 PF00459 Inositol monophosphatase family Sfum_1395 PF00378 Enoyl-CoA hydratase/isomerase Sfum_1396 PF00072 Response regulator receiver domain Sfum_1396 PF00512 His Kinase A (phospho-acceptor) domain Sfum_1396 PF08448 PAS fold Sfum_1396 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_1396 PF13188 PAS domain Sfum_1398 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Sfum_1398 PF07992 Pyridine nucleotide-disulphide oxidoreductase Sfum_1400 PF00753 Metallo-beta-lactamase superfamily Sfum_1400 PF10996 Beta-Casp domain Sfum_1400 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Sfum_1401 PF00440 Bacterial regulatory proteins, tetR family Sfum_1401 PF08359 YsiA-like protein, C-terminal region Sfum_1402 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Sfum_1402 PF12806 Acetyl-CoA dehydrogenase C-terminal like Sfum_1402 PF02770 Acyl-CoA dehydrogenase, middle domain Sfum_1402 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Sfum_1403 PF00108 Thiolase, N-terminal domain Sfum_1403 PF02803 Thiolase, C-terminal domain Sfum_1404 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Sfum_1404 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Sfum_1404 PF00378 Enoyl-CoA hydratase/isomerase Sfum_1411 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Sfum_1412 PF00293 NUDIX domain Sfum_1412 PF09297 NADH pyrophosphatase zinc ribbon domain Sfum_1412 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain Sfum_1413 PF00528 Binding-protein-dependent transport system inner membrane component Sfum_1415 PF13742 OB-fold nucleic acid binding domain Sfum_1415 PF02601 Exonuclease VII, large subunit Sfum_1416 PF02609 Exonuclease VII small subunit Sfum_1417 PF00348 Polyprenyl synthetase Sfum_1418 PF13292 1-deoxy-D-xylulose-5-phosphate synthase Sfum_1418 PF02779 Transketolase, pyrimidine binding domain Sfum_1418 PF02780 Transketolase, C-terminal domain Sfum_1419 PF01728 FtsJ-like methyltransferase Sfum_1419 PF01479 S4 domain Sfum_1420 PF02590 Predicted SPOUT methyltransferase Sfum_1421 PF01106 NifU-like domain Sfum_1422 PF00156 Phosphoribosyl transferase domain Sfum_1424 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Sfum_1424 PF02403 Seryl-tRNA synthetase N-terminal domain Sfum_1425 PF00216 Bacterial DNA-binding protein Sfum_1427 PF00708 Acylphosphatase Sfum_1428 PF03120 NAD-dependent DNA ligase OB-fold domain Sfum_1428 PF03119 NAD-dependent DNA ligase C4 zinc finger domain Sfum_1428 PF00533 BRCA1 C Terminus (BRCT) domain Sfum_1428 PF01653 NAD-dependent DNA ligase adenylation domain Sfum_1428 PF12826 Helix-hairpin-helix motif Sfum_1429 PF01048 Phosphorylase superfamily Sfum_1430 PF00216 Bacterial DNA-binding protein Sfum_1434 PF04851 Type III restriction enzyme, res subunit Sfum_1434 PF18319 PriA DNA helicase Cys-rich region (CRR) domain Sfum_1434 PF00271 Helicase conserved C-terminal domain Sfum_1434 PF17764 3′ DNA-binding domain (3′BD) Sfum_1434 PF18074 Primosomal protein N C-terminal domain Sfum_1435 PF02310 B12 binding domain Sfum_1435 PF04055 Radical SAM superfamily Sfum_1436 PF00583 Acetyltransferase (GNAT) family Sfum_1438 PF01230 HIT domain Sfum_1445 PF00890 FAD binding domain Sfum_1446 PF00072 Response regulator receiver domain Sfum_1447 PF00360 Phytochrome region Sfum_1447 PF01590 GAF domain Sfum_1447 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_1447 PF08446 PAS fold Sfum_1447 PF00512 His Kinase A (phospho-acceptor) domain Sfum_1449 PF00313 'Cold-shock' DNA-binding domain Sfum_1452 PF00271 Helicase conserved C-terminal domain Sfum_1452 PF00270 DEAD/DEAH box helicase Sfum_1456 PF02321 Outer membrane efflux protein Sfum_1457 PF00873 AcrB/AcrD/AcrF family Sfum_1458 PF00529 HlyD membrane-fusion protein of T1SS Sfum_1458 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Sfum_1462 PF11737 Protein of unknown function (DUF3300) Sfum_1464 PF02954 Bacterial regulatory protein, Fis family Sfum_1464 PF01590 GAF domain Sfum_1464 PF00158 Sigma-54 interaction domain Sfum_1468 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Sfum_1468 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Sfum_1469 PF01116 Fructose-bisphosphate aldolase class-II Sfum_1470 PF00343 Carbohydrate phosphorylase Sfum_1471 PF00128 Alpha amylase, catalytic domain Sfum_1471 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Sfum_1472 PF01515 Phosphate acetyl/butaryl transferase Sfum_1472 PF07085 DRTGG domain Sfum_1473 PF00871 Acetokinase family Sfum_1475 PF02887 Pyruvate kinase, alpha/beta domain Sfum_1475 PF00224 Pyruvate kinase, barrel domain Sfum_1476 PF02080 TrkA-C domain Sfum_1476 PF06826 Predicted Permease Membrane Region Sfum_1477 PF00300 Histidine phosphatase superfamily (branch 1) Sfum_1479 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain Sfum_1479 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 Sfum_1483 PF00684 DnaJ central domain Sfum_1483 PF01556 DnaJ C terminal domain Sfum_1483 PF00226 DnaJ domain Sfum_1487 PF00989 PAS fold Sfum_1487 PF00512 His Kinase A (phospho-acceptor) domain Sfum_1487 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_1488 PF00158 Sigma-54 interaction domain Sfum_1488 PF00072 Response regulator receiver domain Sfum_1488 PF02954 Bacterial regulatory protein, Fis family Sfum_1493 PF04972 BON domain Sfum_1493 PF13629 Pilus formation protein N terminal region Sfum_1493 PF00263 Bacterial type II and III secretion system protein Sfum_1498 PF00437 Type II/IV secretion system protein Sfum_1502 PF13188 PAS domain Sfum_1502 PF00072 Response regulator receiver domain Sfum_1502 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_1502 PF00512 His Kinase A (phospho-acceptor) domain Sfum_1502 PF08448 PAS fold Sfum_1503 PF01471 Putative peptidoglycan binding domain Sfum_1503 PF13401 AAA domain Sfum_1504 PF00005 ABC transporter Sfum_1504 PF08402 TOBE domain Sfum_1506 PF01740 STAS domain Sfum_1513 PF00027 Cyclic nucleotide-binding domain Sfum_1513 PF07885 Ion channel Sfum_1514 PF07291 Methylamine utilisation protein MauE Sfum_1516 PF00360 Phytochrome region Sfum_1516 PF01590 GAF domain Sfum_1516 PF00990 Diguanylate cyclase, GGDEF domain Sfum_1516 PF00563 EAL domain Sfum_1521 PF01925 Sulfite exporter TauE/SafE Sfum_1522 PF07729 FCD domain Sfum_1522 PF00392 Bacterial regulatory proteins, gntR family Sfum_1525 PF05443 ROS/MUCR transcriptional regulator protein Sfum_1527 PF02515 CoA-transferase family III Sfum_1529 PF02080 TrkA-C domain Sfum_1529 PF00999 Sodium/hydrogen exchanger family Sfum_1529 PF03471 Transporter associated domain Sfum_1531 PF03547 Membrane transport protein Sfum_1533 PF00285 Citrate synthase, C-terminal domain Sfum_1541 PF00009 Elongation factor Tu GTP binding domain Sfum_1541 PF03144 Elongation factor Tu domain 2 Sfum_1541 PF03143 Elongation factor Tu C-terminal domain Sfum_1542 PF00471 Ribosomal protein L33 Sfum_1543 PF00584 SecE/Sec61-gamma subunits of protein translocation complex Sfum_1544 PF00467 KOW motif Sfum_1544 PF02357 Transcription termination factor nusG Sfum_1545 PF03946 Ribosomal protein L11, N-terminal domain Sfum_1545 PF00298 Ribosomal protein L11, RNA binding domain Sfum_1546 PF00687 Ribosomal protein L1p/L10e family Sfum_1547 PF00466 Ribosomal protein L10 Sfum_1548 PF16320 Ribosomal protein L7/L12 dimerisation domain Sfum_1548 PF00542 Ribosomal protein L7/L12 C-terminal domain Sfum_1549 PF04560 RNA polymerase Rpb2, domain 7 Sfum_1549 PF00562 RNA polymerase Rpb2, domain 6 Sfum_1549 PF10385 RNA polymerase beta subunit external 1 domain Sfum_1549 PF04565 RNA polymerase Rpb2, domain 3 Sfum_1549 PF04561 RNA polymerase Rpb2, domain 2 Sfum_1549 PF04563 RNA polymerase beta subunit Sfum_1550 PF04997 RNA polymerase Rpb1, domain 1 Sfum_1550 PF00623 RNA polymerase Rpb1, domain 2 Sfum_1550 PF04983 RNA polymerase Rpb1, domain 3 Sfum_1550 PF05000 RNA polymerase Rpb1, domain 4 Sfum_1550 PF04998 RNA polymerase Rpb1, domain 5 Sfum_1551 PF00164 Ribosomal protein S12/S23 Sfum_1552 PF00177 Ribosomal protein S7p/S5e Sfum_1553 PF00009 Elongation factor Tu GTP binding domain Sfum_1553 PF03143 Elongation factor Tu C-terminal domain Sfum_1553 PF03144 Elongation factor Tu domain 2 Sfum_1554 PF00338 Ribosomal protein S10p/S20e Sfum_1555 PF00297 Ribosomal protein L3 Sfum_1556 PF00573 Ribosomal protein L4/L1 family Sfum_1557 PF00276 Ribosomal protein L23 Sfum_1558 PF00181 Ribosomal Proteins L2, RNA binding domain Sfum_1558 PF03947 Ribosomal Proteins L2, C-terminal domain Sfum_1559 PF00203 Ribosomal protein S19 Sfum_1560 PF00237 Ribosomal protein L22p/L17e Sfum_1561 PF07650 KH domain Sfum_1561 PF00189 Ribosomal protein S3, C-terminal domain Sfum_1562 PF00252 Ribosomal protein L16p/L10e Sfum_1563 PF00831 Ribosomal L29 protein Sfum_1564 PF00366 Ribosomal protein S17 Sfum_1565 PF00238 Ribosomal protein L14p/L23e Sfum_1566 PF00467 KOW motif Sfum_1566 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 Sfum_1567 PF00673 ribosomal L5P family C-terminus Sfum_1567 PF00281 Ribosomal protein L5 Sfum_1568 PF00253 Ribosomal protein S14p/S29e Sfum_1569 PF00410 Ribosomal protein S8 Sfum_1570 PF00347 Ribosomal protein L6 Sfum_1571 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Sfum_1572 PF00333 Ribosomal protein S5, N-terminal domain Sfum_1572 PF03719 Ribosomal protein S5, C-terminal domain Sfum_1573 PF00327 Ribosomal protein L30p/L7e Sfum_1574 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Sfum_1575 PF00344 SecY translocase Sfum_1576 PF05191 Adenylate kinase, active site lid Sfum_1577 PF00557 Metallopeptidase family M24 Sfum_1578 PF01176 Translation initiation factor 1A / IF-1 Sfum_1579 PF00416 Ribosomal protein S13/S18 Sfum_1580 PF00411 Ribosomal protein S11 Sfum_1581 PF00163 Ribosomal protein S4/S9 N-terminal domain Sfum_1581 PF01479 S4 domain Sfum_1582 PF01000 RNA polymerase Rpb3/RpoA insert domain Sfum_1582 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain Sfum_1582 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain Sfum_1583 PF01196 Ribosomal protein L17 Sfum_1585 PF04055 Radical SAM superfamily Sfum_1585 PF00919 Uncharacterized protein family UPF0004 Sfum_1585 PF18693 TRAM domain Sfum_1586 PF00348 Polyprenyl synthetase Sfum_1588 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Sfum_1588 PF14824 Sirohaem biosynthesis protein central Sfum_1588 PF10414 Sirohaem synthase dimerisation region Sfum_1589 PF01578 Cytochrome C assembly protein Sfum_1590 PF01488 Shikimate / quinate 5-dehydrogenase Sfum_1590 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain Sfum_1590 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain Sfum_1592 PF02416 mttA/Hcf106 family Sfum_1595 PF00436 Single-strand binding protein family Sfum_1597 PF00753 Metallo-beta-lactamase superfamily Sfum_1597 PF17770 Ribonuclease J C-terminal domain Sfum_1597 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Sfum_1598 PF01580 FtsK/SpoIIIE family Sfum_1598 PF09397 Ftsk gamma domain Sfum_1598 PF17854 FtsK alpha domain Sfum_1598 PF13491 4TM region of DNA translocase FtsK/SpoIIIE Sfum_1600 PF02445 Quinolinate synthetase A protein Sfum_1601 PF04166 Pyridoxal phosphate biosynthetic protein PdxA Sfum_1602 PF00005 ABC transporter Sfum_1602 PF17755 UvrA DNA-binding domain Sfum_1602 PF17760 UvrA interaction domain Sfum_1603 PF06971 Putative DNA-binding protein N-terminus Sfum_1603 PF02629 CoA binding domain Sfum_1604 PF00137 ATP synthase subunit C Sfum_1605 PF00119 ATP synthase A chain Sfum_1608 PF00202 Aminotransferase class-III Sfum_1609 PF00575 S1 RNA binding domain Sfum_1609 PF10150 Ribonuclease E/G family Sfum_1610 PF04055 Radical SAM superfamily Sfum_1610 PF02310 B12 binding domain Sfum_1612 PF01612 3'-5' exonuclease Sfum_1612 PF00476 DNA polymerase family A Sfum_1612 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Sfum_1612 PF01367 5'-3' exonuclease, C-terminal SAM fold Sfum_1613 PF01171 PP-loop family Sfum_1624 PF18582 Hydrazine synthase alpha subunit middle domain Sfum_1627 PF00924 Mechanosensitive ion channel Sfum_1632 PF00924 Mechanosensitive ion channel Sfum_1632 PF12795 Mechanosensitive ion channel porin domain Sfum_1632 PF12794 Mechanosensitive ion channel inner membrane domain 1 Sfum_1634 PF01406 tRNA synthetases class I (C) catalytic domain Sfum_1634 PF09190 DALR domain Sfum_1636 PF02542 YgbB family Sfum_1637 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Sfum_1639 PF01202 Shikimate kinase Sfum_1642 PF00528 Binding-protein-dependent transport system inner membrane component Sfum_1643 PF00005 ABC transporter Sfum_1645 PF01339 CheB methylesterase Sfum_1645 PF00072 Response regulator receiver domain Sfum_1647 PF01584 CheW-like domain Sfum_1648 PF00672 HAMP domain Sfum_1648 PF02203 Tar ligand binding domain homologue Sfum_1648 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Sfum_1649 PF00072 Response regulator receiver domain Sfum_1650 PF01584 CheW-like domain Sfum_1650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_1650 PF01627 Hpt domain Sfum_1650 PF02895 Signal transducing histidine kinase, homodimeric domain Sfum_1650 PF01584 CheW-like domain Sfum_1650 PF02895 Signal transducing histidine kinase, homodimeric domain Sfum_1650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_1650 PF01627 Hpt domain Sfum_1650 PF07194 P2 response regulator binding domain Sfum_1650 PF07194 P2 response regulator binding domain Sfum_1651 PF01339 CheB methylesterase Sfum_1651 PF00072 Response regulator receiver domain Sfum_1652 PF00072 Response regulator receiver domain Sfum_1652 PF01339 CheB methylesterase Sfum_1654 PF00025 ADP-ribosylation factor family Sfum_1656 PF12706 Beta-lactamase superfamily domain Sfum_1656 PF00753 Metallo-beta-lactamase superfamily Sfum_1657 PF01544 CorA-like Mg2+ transporter protein Sfum_1661 PF08367 Peptidase M16C associated Sfum_1661 PF00675 Insulinase (Peptidase family M16) Sfum_1661 PF05193 Peptidase M16 inactive domain Sfum_1663 PF00072 Response regulator receiver domain Sfum_1664 PF00072 Response regulator receiver domain Sfum_1664 PF00196 Bacterial regulatory proteins, luxR family Sfum_1665 PF00155 Aminotransferase class I and II Sfum_1666 PF01416 tRNA pseudouridine synthase Sfum_1667 PF01118 Semialdehyde dehydrogenase, NAD binding domain Sfum_1667 PF02774 Semialdehyde dehydrogenase, dimerisation domain Sfum_1668 PF00380 Ribosomal protein S9/S16 Sfum_1669 PF00572 Ribosomal protein L13 Sfum_1670 PF04453 LPS transport system D Sfum_1670 PF03968 OstA-like protein Sfum_1671 PF02875 Mur ligase family, glutamate ligase domain Sfum_1671 PF08245 Mur ligase middle domain Sfum_1675 PF03099 Biotin/lipoate A/B protein ligase family Sfum_1676 PF14535 AMP-binding enzyme C-terminal domain Sfum_1676 PF00501 AMP-binding enzyme Sfum_1677 PF00005 ABC transporter Sfum_1678 PF12399 Branched-chain amino acid ATP-binding cassette transporter Sfum_1678 PF00005 ABC transporter Sfum_1679 PF11862 Domain of unknown function (DUF3382) Sfum_1679 PF02653 Branched-chain amino acid transport system / permease component Sfum_1680 PF02653 Branched-chain amino acid transport system / permease component Sfum_1681 PF13458 Periplasmic binding protein Sfum_1683 PF14535 AMP-binding enzyme C-terminal domain Sfum_1683 PF00501 AMP-binding enzyme Sfum_1685 PF00294 pfkB family carbohydrate kinase Sfum_1685 PF01467 Cytidylyltransferase-like Sfum_1687 PF00588 SpoU rRNA Methylase family Sfum_1691 PF01734 Patatin-like phospholipase Sfum_1692 PF08543 Phosphomethylpyrimidine kinase Sfum_1693 PF00586 AIR synthase related protein, N-terminal domain Sfum_1693 PF02769 AIR synthase related protein, C-terminal domain Sfum_1694 PF00437 Type II/IV secretion system protein Sfum_1695 PF00437 Type II/IV secretion system protein Sfum_1697 PF12706 Beta-lactamase superfamily domain Sfum_1698 PF09369 Domain of unknown function (DUF1998) Sfum_1698 PF00271 Helicase conserved C-terminal domain Sfum_1698 PF00270 DEAD/DEAH box helicase Sfum_1700 PF03453 MoeA N-terminal region (domain I and II) Sfum_1700 PF00994 Probable molybdopterin binding domain Sfum_1700 PF03454 MoeA C-terminal region (domain IV) Sfum_1701 PF03459 TOBE domain Sfum_1701 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Sfum_1702 PF02629 CoA binding domain Sfum_1702 PF00549 CoA-ligase Sfum_1703 PF00549 CoA-ligase Sfum_1703 PF08442 ATP-grasp domain Sfum_1705 PF02934 GatB/GatE catalytic domain Sfum_1705 PF02637 GatB domain Sfum_1706 PF01008 Initiation factor 2 subunit family Sfum_1707 PF18073 Rubredoxin metal binding domain Sfum_1708 PF00085 Thioredoxin Sfum_1709 PF07992 Pyridine nucleotide-disulphide oxidoreductase Sfum_1711 PF07498 Rho termination factor, N-terminal domain Sfum_1711 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Sfum_1711 PF07497 Rho termination factor, RNA-binding domain Sfum_1712 PF01197 Ribosomal protein L31 Sfum_1713 PF03462 PCRF domain Sfum_1713 PF00472 RF-1 domain Sfum_1714 PF17827 PrmC N-terminal domain Sfum_1714 PF05175 Methyltransferase small domain Sfum_1715 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Sfum_1716 PF03772 Competence protein Sfum_1716 PF00753 Metallo-beta-lactamase superfamily Sfum_1716 PF13567 Domain of unknown function (DUF4131) Sfum_1718 PF16363 GDP-mannose 4,6 dehydratase Sfum_1721 PF06628 Catalase-related immune-responsive Sfum_1721 PF00199 Catalase Sfum_1723 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Sfum_1723 PF07992 Pyridine nucleotide-disulphide oxidoreductase Sfum_1724 PF01645 Conserved region in glutamate synthase Sfum_1724 PF13187 4Fe-4S dicluster domain Sfum_1728 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family Sfum_1729 PF00111 2Fe-2S iron-sulfur cluster binding domain Sfum_1729 PF01799 [2Fe-2S] binding domain Sfum_1730 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Sfum_1731 PF13419 Haloacid dehalogenase-like hydrolase Sfum_1732 PF00753 Metallo-beta-lactamase superfamily Sfum_1733 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain Sfum_1733 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Sfum_1736 PF08546 Ketopantoate reductase PanE/ApbA C terminal Sfum_1736 PF02558 Ketopantoate reductase PanE/ApbA Sfum_1737 PF00155 Aminotransferase class I and II Sfum_1738 PF03186 CobD/Cbib protein Sfum_1739 PF07685 CobB/CobQ-like glutamine amidotransferase domain Sfum_1740 PF07685 CobB/CobQ-like glutamine amidotransferase domain Sfum_1740 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Sfum_1741 PF13361 UvrD-like helicase C-terminal domain Sfum_1741 PF00580 UvrD/REP helicase N-terminal domain Sfum_1742 PF00011 Hsp20/alpha crystallin family Sfum_1743 PF00011 Hsp20/alpha crystallin family Sfum_1749 PF02632 BioY family Sfum_1750 PF00005 ABC transporter Sfum_1751 PF02361 Cobalt transport protein Sfum_1755 PF00005 ABC transporter Sfum_1756 PF00226 DnaJ domain Sfum_1756 PF00684 DnaJ central domain Sfum_1756 PF01556 DnaJ C terminal domain Sfum_1758 PF01192 RNA polymerase Rpb6 Sfum_1762 PF00248 Aldo/keto reductase family Sfum_1764 PF02926 THUMP domain Sfum_1764 PF01170 Putative RNA methylase family UPF0020 Sfum_1767 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain Sfum_1767 PF02777 Iron/manganese superoxide dismutases, C-terminal domain Sfum_1770 PF00290 Tryptophan synthase alpha chain Sfum_1771 PF00291 Pyridoxal-phosphate dependent enzyme Sfum_1773 PF00218 Indole-3-glycerol phosphate synthase Sfum_1774 PF00591 Glycosyl transferase family, a/b domain Sfum_1774 PF02885 Glycosyl transferase family, helical bundle domain Sfum_1775 PF00117 Glutamine amidotransferase class-I Sfum_1776 PF04715 Anthranilate synthase component I, N terminal region Sfum_1776 PF00425 chorismate binding enzyme Sfum_1777 PF00793 DAHP synthetase I family Sfum_1777 PF18152 DAHP synthase ferredoxin-like domain Sfum_1778 PF00318 Ribosomal protein S2 Sfum_1779 PF00889 Elongation factor TS Sfum_1780 PF00696 Amino acid kinase family Sfum_1781 PF01765 Ribosome recycling factor Sfum_1782 PF01255 Putative undecaprenyl diphosphate synthase Sfum_1784 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase Sfum_1784 PF13288 DXP reductoisomerase C-terminal domain Sfum_1784 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain Sfum_1785 PF17820 PDZ domain Sfum_1785 PF02163 Peptidase family M50 Sfum_1786 PF00814 Glycoprotease family Sfum_1791 PF00374 Nickel-dependent hydrogenase Sfum_1792 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Sfum_1792 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal Sfum_1795 PF01568 Molydopterin dinucleotide binding domain Sfum_1795 PF00384 Molybdopterin oxidoreductase Sfum_1795 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Sfum_1796 PF01568 Molydopterin dinucleotide binding domain Sfum_1796 PF00037 4Fe-4S binding domain Sfum_1796 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Sfum_1796 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Sfum_1796 PF00384 Molybdopterin oxidoreductase Sfum_1800 PF13932 GidA associated domain Sfum_1800 PF01134 Glucose inhibited division protein A Sfum_1801 PF02754 Cysteine-rich domain Sfum_1801 PF13183 4Fe-4S dicluster domain Sfum_1808 PF02705 K+ potassium transporter Sfum_1809 PF01926 50S ribosome-binding GTPase Sfum_1809 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Sfum_1811 PF00535 Glycosyl transferase family 2 Sfum_1812 PF02401 LytB protein Sfum_1813 PF01207 Dihydrouridine synthase (Dus) Sfum_1814 PF01048 Phosphorylase superfamily Sfum_1815 PF02621 Menaquinone biosynthesis Sfum_1817 PF03109 ABC1 family Sfum_1818 PF07311 Dodecin Sfum_1819 PF00117 Glutamine amidotransferase class-I Sfum_1819 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain Sfum_1820 PF00581 Rhodanese-like domain Sfum_1820 PF00899 ThiF family Sfum_1821 PF05690 Thiazole biosynthesis protein ThiG Sfum_1822 PF04055 Radical SAM superfamily Sfum_1822 PF06968 Biotin and Thiamin Synthesis associated domain Sfum_1823 PF05690 Thiazole biosynthesis protein ThiG Sfum_1823 PF02597 ThiS family Sfum_1824 PF02581 Thiamine monophosphate synthase Sfum_1825 PF06968 Biotin and Thiamin Synthesis associated domain Sfum_1825 PF04055 Radical SAM superfamily Sfum_1826 PF01061 ABC-2 type transporter Sfum_1827 PF00005 ABC transporter Sfum_1831 PF12111 Polyribonucleotide phosphorylase C terminal Sfum_1831 PF00575 S1 RNA binding domain Sfum_1831 PF10150 Ribonuclease E/G family Sfum_1835 PF02515 CoA-transferase family III Sfum_1836 PF00291 Pyridoxal-phosphate dependent enzyme Sfum_1838 PF16921 Tex protein YqgF-like domain Sfum_1838 PF17674 HHH domain Sfum_1838 PF09371 Tex-like protein N-terminal domain Sfum_1838 PF00575 S1 RNA binding domain Sfum_1841 PF04055 Radical SAM superfamily Sfum_1841 PF06968 Biotin and Thiamin Synthesis associated domain Sfum_1842 PF10415 Fumarase C C-terminus Sfum_1842 PF00206 Lyase Sfum_1843 PF01926 50S ribosome-binding GTPase Sfum_1843 PF12631 MnmE helical domain Sfum_1843 PF10396 GTP-binding protein TrmE N-terminus Sfum_1844 PF06968 Biotin and Thiamin Synthesis associated domain Sfum_1844 PF04055 Radical SAM superfamily Sfum_1851 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Sfum_1851 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Sfum_1851 PF00205 Thiamine pyrophosphate enzyme, central domain Sfum_1856 PF00144 Beta-lactamase Sfum_1860 PF00664 ABC transporter transmembrane region Sfum_1860 PF00005 ABC transporter Sfum_1861 PF00072 Response regulator receiver domain Sfum_1862 PF00360 Phytochrome region Sfum_1862 PF08446 PAS fold Sfum_1862 PF01590 GAF domain Sfum_1862 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_1862 PF00512 His Kinase A (phospho-acceptor) domain Sfum_1863 PF03641 Possible lysine decarboxylase Sfum_1865 PF10672 S-adenosylmethionine-dependent methyltransferase Sfum_1865 PF17785 PUA-like domain Sfum_1869 PF07730 Histidine kinase Sfum_1869 PF17200 Single Cache domain 2 Sfum_1876 PF03237 Terminase-like family Sfum_1877 PF06074 Protein of unknown function (DUF935) Sfum_1882 PF10124 Mu-like prophage major head subunit gpT Sfum_1884 PF07030 Protein of unknown function (DUF1320) Sfum_1905 PF06463 Molybdenum Cofactor Synthesis C Sfum_1905 PF04055 Radical SAM superfamily Sfum_1906 PF00512 His Kinase A (phospho-acceptor) domain Sfum_1906 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_1907 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Sfum_1907 PF03466 LysR substrate binding domain Sfum_1909 PF14490 Helix-hairpin-helix containing domain Sfum_1909 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain Sfum_1909 PF13538 UvrD-like helicase C-terminal domain Sfum_1911 PF04751 Protein of unknown function (DUF615) Sfum_1913 PF00480 ROK family Sfum_1915 PF00571 CBS domain Sfum_1919 PF01119 DNA mismatch repair protein, C-terminal domain Sfum_1919 PF08676 MutL C terminal dimerisation domain Sfum_1921 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Sfum_1922 PF16653 Saccharopine dehydrogenase C-terminal domain Sfum_1922 PF03435 Saccharopine dehydrogenase NADP binding domain Sfum_1923 PF00106 short chain dehydrogenase Sfum_1926 PF00849 RNA pseudouridylate synthase Sfum_1930 PF00291 Pyridoxal-phosphate dependent enzyme Sfum_1931 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase Sfum_1933 PF00512 His Kinase A (phospho-acceptor) domain Sfum_1933 PF00672 HAMP domain Sfum_1933 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_1933 PF00989 PAS fold Sfum_1934 PF02954 Bacterial regulatory protein, Fis family Sfum_1934 PF00072 Response regulator receiver domain Sfum_1934 PF00158 Sigma-54 interaction domain Sfum_1935 PF00361 Proton-conducting membrane transporter Sfum_1936 PF00361 Proton-conducting membrane transporter Sfum_1937 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus Sfum_1937 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Sfum_1937 PF00361 Proton-conducting membrane transporter Sfum_1938 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Sfum_1939 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Sfum_1940 PF12838 4Fe-4S dicluster domain Sfum_1941 PF00146 NADH dehydrogenase Sfum_1942 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Sfum_1942 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Sfum_1942 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Sfum_1943 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 Sfum_1945 PF03527 RHS protein Sfum_1945 PF05593 RHS Repeat Sfum_1946 PF03527 RHS protein Sfum_1946 PF05593 RHS Repeat Sfum_1949 PF13426 PAS domain Sfum_1949 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_1949 PF00512 His Kinase A (phospho-acceptor) domain Sfum_1949 PF08448 PAS fold Sfum_1949 PF00072 Response regulator receiver domain Sfum_1951 PF00834 Ribulose-phosphate 3 epimerase family Sfum_1952 PF00342 Phosphoglucose isomerase Sfum_1953 PF00480 ROK family Sfum_1954 PF01568 Molydopterin dinucleotide binding domain Sfum_1954 PF00384 Molybdopterin oxidoreductase Sfum_1954 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Sfum_1954 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Sfum_1955 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Sfum_1955 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Sfum_1955 PF10531 SLBB domain Sfum_1958 PF00753 Metallo-beta-lactamase superfamily Sfum_1961 PF04055 Radical SAM superfamily Sfum_1961 PF02579 Dinitrogenase iron-molybdenum cofactor Sfum_1962 PF01343 Peptidase family S49 Sfum_1963 PF00497 Bacterial extracellular solute-binding proteins, family 3 Sfum_1965 PF00210 Ferritin-like domain Sfum_1966 PF13380 CoA binding domain Sfum_1966 PF13607 Succinyl-CoA ligase like flavodoxin domain Sfum_1966 PF00583 Acetyltransferase (GNAT) family Sfum_1967 PF01894 Uncharacterised protein family UPF0047 Sfum_1977 PF04324 BFD-like [2Fe-2S] binding domain Sfum_1977 PF07992 Pyridine nucleotide-disulphide oxidoreductase Sfum_1978 PF02074 Carboxypeptidase Taq (M32) metallopeptidase Sfum_1981 PF01261 Xylose isomerase-like TIM barrel Sfum_1983 PF14489 QueF-like protein Sfum_1984 PF06508 Queuosine biosynthesis protein QueC Sfum_1985 PF04055 Radical SAM superfamily Sfum_1987 PF00082 Subtilase family Sfum_1988 PF00440 Bacterial regulatory proteins, tetR family Sfum_1989 PF13243 Squalene-hopene cyclase C-terminal domain Sfum_1989 PF13249 Squalene-hopene cyclase N-terminal domain Sfum_1996 PF01871 AMMECR1 Sfum_1997 PF01553 Acyltransferase Sfum_1998 PF13183 4Fe-4S dicluster domain Sfum_1998 PF13085 2Fe-2S iron-sulfur cluster binding domain Sfum_1999 PF00890 FAD binding domain Sfum_1999 PF02910 Fumarate reductase flavoprotein C-term Sfum_2000 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit Sfum_2005 PF17820 PDZ domain Sfum_2005 PF13180 PDZ domain Sfum_2006 PF00672 HAMP domain Sfum_2006 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_2006 PF00512 His Kinase A (phospho-acceptor) domain Sfum_2007 PF00486 Transcriptional regulatory protein, C terminal Sfum_2007 PF00072 Response regulator receiver domain Sfum_2010 PF00941 FAD binding domain in molybdopterin dehydrogenase Sfum_2010 PF03450 CO dehydrogenase flavoprotein C-terminal domain Sfum_2011 PF01799 [2Fe-2S] binding domain Sfum_2011 PF00111 2Fe-2S iron-sulfur cluster binding domain Sfum_2012 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Sfum_2012 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Sfum_2015 PF00155 Aminotransferase class I and II Sfum_2032 PF06463 Molybdenum Cofactor Synthesis C Sfum_2032 PF04055 Radical SAM superfamily Sfum_2034 PF00230 Major intrinsic protein Sfum_2040 PF04228 Putative neutral zinc metallopeptidase Sfum_2044 PF01476 LysM domain Sfum_2044 PF05257 CHAP domain Sfum_2051 PF00497 Bacterial extracellular solute-binding proteins, family 3 Sfum_2052 PF03600 Citrate transporter Sfum_2057 PF02661 Fic/DOC family Sfum_2057 PF13784 Fic/DOC family N-terminal Sfum_2059 PF00121 Triosephosphate isomerase Sfum_2060 PF00162 Phosphoglycerate kinase Sfum_2061 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Sfum_2061 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Sfum_2062 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Sfum_2062 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Sfum_2063 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Sfum_2063 PF02896 PEP-utilising enzyme, TIM barrel domain Sfum_2063 PF00391 PEP-utilising enzyme, mobile domain Sfum_2066 PF03668 P-loop ATPase protein family Sfum_2067 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Sfum_2068 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein Sfum_2068 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus Sfum_2069 PF00309 Sigma-54 factor, Activator interacting domain (AID) Sfum_2069 PF04552 Sigma-54, DNA binding domain Sfum_2069 PF04963 Sigma-54 factor, core binding domain Sfum_2070 PF00005 ABC transporter Sfum_2074 PF00793 DAHP synthetase I family Sfum_2075 PF06418 CTP synthase N-terminus Sfum_2075 PF00117 Glutamine amidotransferase class-I Sfum_2076 PF00478 IMP dehydrogenase / GMP reductase domain Sfum_2076 PF00571 CBS domain Sfum_2077 PF00501 AMP-binding enzyme Sfum_2077 PF13193 AMP-binding enzyme C-terminal domain Sfum_2078 PF12706 Beta-lactamase superfamily domain Sfum_2081 PF00883 Cytosol aminopeptidase family, catalytic domain Sfum_2081 PF02789 Cytosol aminopeptidase family, N-terminal domain Sfum_2082 PF00899 ThiF family Sfum_2083 PF00266 Aminotransferase class-V Sfum_2084 PF08264 Anticodon-binding domain of tRNA Sfum_2084 PF00133 tRNA synthetases class I (I, L, M and V) Sfum_2084 PF13603 Leucyl-tRNA synthetase, Domain 2 Sfum_2087 PF01649 Ribosomal protein S20 Sfum_2089 PF03449 Transcription elongation factor, N-terminal Sfum_2089 PF01272 Transcription elongation factor, GreA/GreB, C-term Sfum_2090 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Sfum_2090 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Sfum_2091 PF01979 Amidohydrolase family Sfum_2092 PF00072 Response regulator receiver domain Sfum_2092 PF00158 Sigma-54 interaction domain Sfum_2092 PF02954 Bacterial regulatory protein, Fis family Sfum_2095 PF00459 Inositol monophosphatase family Sfum_2097 PF02311 AraC-like ligand binding domain Sfum_2097 PF12833 Helix-turn-helix domain Sfum_2102 PF00206 Lyase Sfum_2102 PF10415 Fumarase C C-terminus Sfum_2103 PF13085 2Fe-2S iron-sulfur cluster binding domain Sfum_2104 PF02910 Fumarate reductase flavoprotein C-term Sfum_2104 PF00890 FAD binding domain Sfum_2105 PF00285 Citrate synthase, C-terminal domain Sfum_2106 PF00330 Aconitase family (aconitate hydratase) Sfum_2107 PF00216 Bacterial DNA-binding protein Sfum_2111 PF13291 ACT domain Sfum_2111 PF04607 Region found in RelA / SpoT proteins Sfum_2111 PF02824 TGS domain Sfum_2112 PF04551 GcpE protein Sfum_2113 PF00534 Glycosyl transferases group 1 Sfum_2113 PF08323 Starch synthase catalytic domain Sfum_2115 PF04545 Sigma-70, region 4 Sfum_2115 PF04542 Sigma-70 region 2 Sfum_2115 PF00140 Sigma-70 factor, region 1.2 Sfum_2116 PF00155 Aminotransferase class I and II Sfum_2117 PF02224 Cytidylate kinase Sfum_2118 PF00575 S1 RNA binding domain Sfum_2119 PF01343 Peptidase family S49 Sfum_2120 PF01300 Telomere recombination Sfum_2121 PF01761 3-dehydroquinate synthase Sfum_2121 PF02541 Ppx/GppA phosphatase family Sfum_2122 PF00571 CBS domain Sfum_2122 PF00478 IMP dehydrogenase / GMP reductase domain Sfum_2123 PF00958 GMP synthase C terminal domain Sfum_2123 PF00117 Glutamine amidotransferase class-I Sfum_2123 PF02540 NAD synthase Sfum_2126 PF01230 HIT domain Sfum_2129 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Sfum_2130 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Sfum_2131 PF01888 CbiD Sfum_2133 PF00005 ABC transporter Sfum_2134 PF01032 FecCD transport family Sfum_2135 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Sfum_2136 PF02570 Precorrin-8X methylmutase Sfum_2137 PF03699 Uncharacterised protein family (UPF0182) Sfum_2138 PF09350 Domain of unknown function (DUF1992) Sfum_2141 PF02653 Branched-chain amino acid transport system / permease component Sfum_2143 PF00005 ABC transporter Sfum_2143 PF12399 Branched-chain amino acid ATP-binding cassette transporter Sfum_2144 PF00005 ABC transporter Sfum_2145 PF01979 Amidohydrolase family Sfum_2146 PF02754 Cysteine-rich domain Sfum_2149 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Sfum_2149 PF07992 Pyridine nucleotide-disulphide oxidoreductase Sfum_2150 PF07992 Pyridine nucleotide-disulphide oxidoreductase Sfum_2150 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Sfum_2151 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B Sfum_2151 PF00970 Oxidoreductase FAD-binding domain Sfum_2151 PF00175 Oxidoreductase NAD-binding domain Sfum_2152 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Sfum_2152 PF00384 Molybdopterin oxidoreductase Sfum_2152 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Sfum_2156 PF16347 Domain of unknown function (DUF4976) Sfum_2156 PF00884 Sulfatase Sfum_2157 PF13186 Iron-sulfur cluster-binding domain Sfum_2157 PF04055 Radical SAM superfamily Sfum_2161 PF03819 MazG nucleotide pyrophosphohydrolase domain Sfum_2163 PF02562 PhoH-like protein Sfum_2164 PF07697 7TM-HD extracellular Sfum_2164 PF01966 HD domain Sfum_2164 PF07698 7TM receptor with intracellular HD hydrolase Sfum_2165 PF02130 Uncharacterized protein family UPF0054 Sfum_2166 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ Sfum_2167 PF01648 4'-phosphopantetheinyl transferase superfamily Sfum_2168 PF03853 YjeF-related protein N-terminus Sfum_2168 PF01256 Carbohydrate kinase Sfum_2169 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE Sfum_2171 PF02310 B12 binding domain Sfum_2171 PF04055 Radical SAM superfamily Sfum_2171 PF13282 Domain of unknown function (DUF4070) Sfum_2173 PF13840 ACT domain Sfum_2173 PF00696 Amino acid kinase family Sfum_2173 PF01842 ACT domain Sfum_2174 PF08502 LeuA allosteric (dimerisation) domain Sfum_2174 PF00682 HMGL-like Sfum_2177 PF01966 HD domain Sfum_2177 PF00072 Response regulator receiver domain Sfum_2183 PF02706 Chain length determinant protein Sfum_2183 PF13807 G-rich domain on putative tyrosine kinase Sfum_2183 PF13614 AAA domain Sfum_2184 PF02719 Polysaccharide biosynthesis protein Sfum_2188 PF00534 Glycosyl transferases group 1 Sfum_2188 PF13439 Glycosyltransferase Family 4 Sfum_2189 PF02397 Bacterial sugar transferase Sfum_2190 PF16363 GDP-mannose 4,6 dehydratase Sfum_2195 PF00877 NlpC/P60 family Sfum_2197 PF04055 Radical SAM superfamily Sfum_2197 PF06463 Molybdenum Cofactor Synthesis C Sfum_2200 PF00313 'Cold-shock' DNA-binding domain Sfum_2202 PF00478 IMP dehydrogenase / GMP reductase domain Sfum_2202 PF00571 CBS domain Sfum_2203 PF00171 Aldehyde dehydrogenase family Sfum_2204 PF07228 Stage II sporulation protein E (SpoIIE) Sfum_2204 PF00672 HAMP domain Sfum_2205 PF09084 NMT1/THI5 like Sfum_2207 PF00072 Response regulator receiver domain Sfum_2208 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_2208 PF01627 Hpt domain Sfum_2208 PF00512 His Kinase A (phospho-acceptor) domain Sfum_2208 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Sfum_2208 PF00072 Response regulator receiver domain Sfum_2208 PF00672 HAMP domain Sfum_2209 PF00990 Diguanylate cyclase, GGDEF domain Sfum_2209 PF03707 Bacterial signalling protein N terminal repeat Sfum_2209 PF00563 EAL domain Sfum_2210 PF04055 Radical SAM superfamily Sfum_2210 PF01938 TRAM domain Sfum_2210 PF00919 Uncharacterized protein family UPF0004 Sfum_2212 PF12849 PBP superfamily domain Sfum_2213 PF02492 CobW/HypB/UreG, nucleotide-binding domain Sfum_2214 PF02954 Bacterial regulatory protein, Fis family Sfum_2214 PF00989 PAS fold Sfum_2214 PF00158 Sigma-54 interaction domain Sfum_2215 PF00005 ABC transporter Sfum_2216 PF00528 Binding-protein-dependent transport system inner membrane component Sfum_2217 PF00005 ABC transporter Sfum_2218 PF00528 Binding-protein-dependent transport system inner membrane component Sfum_2220 PF01750 Hydrogenase maturation protease Sfum_2221 PF00374 Nickel-dependent hydrogenase Sfum_2222 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Sfum_2224 PF02910 Fumarate reductase flavoprotein C-term Sfum_2224 PF00890 FAD binding domain Sfum_2226 PF00912 Transglycosylase Sfum_2226 PF00905 Penicillin binding protein transpeptidase domain Sfum_2227 PF00207 Alpha-2-macroglobulin family Sfum_2227 PF07703 Alpha-2-macroglobulin bait region domain Sfum_2227 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain Sfum_2227 PF01835 MG2 domain Sfum_2233 PF12704 MacB-like periplasmic core domain Sfum_2233 PF02687 FtsX-like permease family Sfum_2233 PF00005 ABC transporter Sfum_2234 PF00005 ABC transporter Sfum_2234 PF02687 FtsX-like permease family Sfum_2234 PF12704 MacB-like periplasmic core domain Sfum_2237 PF09335 SNARE associated Golgi protein Sfum_2239 PF01075 Glycosyltransferase family 9 (heptosyltransferase) Sfum_2243 PF00535 Glycosyl transferase family 2 Sfum_2246 PF00873 AcrB/AcrD/AcrF family Sfum_2247 PF00529 HlyD membrane-fusion protein of T1SS Sfum_2247 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Sfum_2248 PF07731 Multicopper oxidase Sfum_2248 PF07732 Multicopper oxidase Sfum_2248 PF00394 Multicopper oxidase Sfum_2251 PF00107 Zinc-binding dehydrogenase Sfum_2251 PF08240 Alcohol dehydrogenase GroES-like domain Sfum_2252 PF04055 Radical SAM superfamily Sfum_2253 PF13439 Glycosyltransferase Family 4 Sfum_2253 PF00534 Glycosyl transferases group 1 Sfum_2258 PF01434 Peptidase family M41 Sfum_2258 PF17862 AAA+ lid domain Sfum_2258 PF00004 ATPase family associated with various cellular activities (AAA) Sfum_2261 PF00534 Glycosyl transferases group 1 Sfum_2261 PF13439 Glycosyltransferase Family 4 Sfum_2262 PF04321 RmlD substrate binding domain Sfum_2263 PF00483 Nucleotidyl transferase Sfum_2264 PF16363 GDP-mannose 4,6 dehydratase Sfum_2265 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase Sfum_2271 PF00582 Universal stress protein family Sfum_2272 PF00999 Sodium/hydrogen exchanger family Sfum_2272 PF02254 TrkA-N domain Sfum_2275 PF01384 Phosphate transporter family Sfum_2279 PF00082 Subtilase family Sfum_2279 PF05922 Peptidase inhibitor I9 Sfum_2280 PF00108 Thiolase, N-terminal domain Sfum_2280 PF02803 Thiolase, C-terminal domain Sfum_2281 PF00005 ABC transporter Sfum_2282 PF00005 ABC transporter Sfum_2282 PF12399 Branched-chain amino acid ATP-binding cassette transporter Sfum_2283 PF11862 Domain of unknown function (DUF3382) Sfum_2283 PF02653 Branched-chain amino acid transport system / permease component Sfum_2284 PF02653 Branched-chain amino acid transport system / permease component Sfum_2285 PF13458 Periplasmic binding protein Sfum_2287 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 Sfum_2287 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain Sfum_2288 PF00202 Aminotransferase class-III Sfum_2289 PF00158 Sigma-54 interaction domain Sfum_2289 PF13426 PAS domain Sfum_2289 PF02954 Bacterial regulatory protein, Fis family Sfum_2290 PF01144 Coenzyme A transferase Sfum_2291 PF01144 Coenzyme A transferase Sfum_2292 PF00072 Response regulator receiver domain Sfum_2292 PF00158 Sigma-54 interaction domain Sfum_2294 PF00672 HAMP domain Sfum_2294 PF13426 PAS domain Sfum_2294 PF00512 His Kinase A (phospho-acceptor) domain Sfum_2294 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_2301 PF01361 Tautomerase enzyme Sfum_2303 PF00486 Transcriptional regulatory protein, C terminal Sfum_2303 PF00072 Response regulator receiver domain Sfum_2304 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_2304 PF01627 Hpt domain Sfum_2304 PF00072 Response regulator receiver domain Sfum_2304 PF00512 His Kinase A (phospho-acceptor) domain Sfum_2305 PF13458 Periplasmic binding protein Sfum_2306 PF13458 Periplasmic binding protein Sfum_2307 PF00990 Diguanylate cyclase, GGDEF domain Sfum_2307 PF13426 PAS domain Sfum_2307 PF00563 EAL domain Sfum_2310 PF01145 SPFH domain / Band 7 family Sfum_2312 PF00795 Carbon-nitrogen hydrolase Sfum_2313 PF00005 ABC transporter Sfum_2314 PF12399 Branched-chain amino acid ATP-binding cassette transporter Sfum_2314 PF00005 ABC transporter Sfum_2317 PF07729 FCD domain Sfum_2317 PF00392 Bacterial regulatory proteins, gntR family Sfum_2319 PF04055 Radical SAM superfamily Sfum_2319 PF06463 Molybdenum Cofactor Synthesis C Sfum_2320 PF02525 Flavodoxin-like fold Sfum_2323 PF11737 Protein of unknown function (DUF3300) Sfum_2324 PF02310 B12 binding domain Sfum_2324 PF04055 Radical SAM superfamily Sfum_2325 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase Sfum_2326 PF01434 Peptidase family M41 Sfum_2326 PF17862 AAA+ lid domain Sfum_2326 PF00004 ATPase family associated with various cellular activities (AAA) Sfum_2326 PF06480 FtsH Extracellular Sfum_2329 PF00756 Putative esterase Sfum_2332 PF01625 Peptide methionine sulfoxide reductase Sfum_2333 PF01554 MatE Sfum_2336 PF05681 Fumarate hydratase (Fumerase) Sfum_2336 PF05683 Fumarase C-terminus Sfum_2340 PF08534 Redoxin Sfum_2345 PF00118 TCP-1/cpn60 chaperonin family Sfum_2346 PF00166 Chaperonin 10 Kd subunit Sfum_2348 PF00534 Glycosyl transferases group 1 Sfum_2349 PF00128 Alpha amylase, catalytic domain Sfum_2349 PF11941 Domain of unknown function (DUF3459) Sfum_2351 PF00128 Alpha amylase, catalytic domain Sfum_2352 PF00654 Voltage gated chloride channel Sfum_2364 PF00684 DnaJ central domain Sfum_2364 PF01556 DnaJ C terminal domain Sfum_2364 PF00226 DnaJ domain Sfum_2365 PF00011 Hsp20/alpha crystallin family Sfum_2366 PF00011 Hsp20/alpha crystallin family Sfum_2367 PF00589 Phage integrase family Sfum_2367 PF02899 Phage integrase, N-terminal SAM-like domain Sfum_2372 PF13186 Iron-sulfur cluster-binding domain Sfum_2372 PF04055 Radical SAM superfamily Sfum_2375 PF07687 Peptidase dimerisation domain Sfum_2375 PF01546 Peptidase family M20/M25/M40 Sfum_2376 PF17391 Urocanase N-terminal domain Sfum_2376 PF01175 Urocanase Rossmann-like domain Sfum_2376 PF17392 Urocanase C-terminal domain Sfum_2377 PF01979 Amidohydrolase family Sfum_2378 PF00221 Aromatic amino acid lyase Sfum_2379 PF13188 PAS domain Sfum_2379 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_2379 PF00512 His Kinase A (phospho-acceptor) domain Sfum_2379 PF00072 Response regulator receiver domain Sfum_2379 PF08448 PAS fold Sfum_2380 PF01520 N-acetylmuramoyl-L-alanine amidase Sfum_2380 PF08239 Bacterial SH3 domain Sfum_2381 PF01435 Peptidase family M48 Sfum_2382 PF00211 Adenylate and Guanylate cyclase catalytic domain Sfum_2382 PF02743 Cache domain Sfum_2382 PF00672 HAMP domain Sfum_2387 PF07690 Major Facilitator Superfamily Sfum_2388 PF17200 Single Cache domain 2 Sfum_2388 PF07730 Histidine kinase Sfum_2390 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Sfum_2391 PF00005 ABC transporter Sfum_2395 PF01566 Natural resistance-associated macrophage protein Sfum_2396 PF01769 Divalent cation transporter Sfum_2396 PF03448 MgtE intracellular N domain Sfum_2396 PF00571 CBS domain Sfum_2398 PF02335 Cytochrome c552 Sfum_2400 PF01545 Cation efflux family Sfum_2400 PF16916 Dimerisation domain of Zinc Transporter Sfum_2401 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_2401 PF00072 Response regulator receiver domain Sfum_2401 PF13426 PAS domain Sfum_2402 PF01979 Amidohydrolase family Sfum_2404 PF00291 Pyridoxal-phosphate dependent enzyme Sfum_2408 PF08338 Domain of unknown function (DUF1731) Sfum_2408 PF01370 NAD dependent epimerase/dehydratase family Sfum_2409 PF07992 Pyridine nucleotide-disulphide oxidoreductase Sfum_2410 PF06415 BPG-independent PGAM N-terminus (iPGM_N) Sfum_2410 PF01676 Metalloenzyme superfamily Sfum_2411 PF13180 PDZ domain Sfum_2412 PF00595 PDZ domain Sfum_2414 PF02405 Permease MlaE Sfum_2415 PF00005 ABC transporter Sfum_2416 PF02470 MlaD protein Sfum_2428 PF10011 Predicted membrane protein (DUF2254) Sfum_2430 PF13186 Iron-sulfur cluster-binding domain Sfum_2430 PF04055 Radical SAM superfamily Sfum_2433 PF02254 TrkA-N domain Sfum_2433 PF00999 Sodium/hydrogen exchanger family Sfum_2436 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Sfum_2437 PF00873 AcrB/AcrD/AcrF family Sfum_2438 PF10415 Fumarase C C-terminus Sfum_2438 PF00206 Lyase Sfum_2439 PF01272 Transcription elongation factor, GreA/GreB, C-term Sfum_2439 PF14760 Rnk N-terminus Sfum_2442 PF00158 Sigma-54 interaction domain Sfum_2442 PF00072 Response regulator receiver domain Sfum_2442 PF02954 Bacterial regulatory protein, Fis family Sfum_2443 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_2443 PF13188 PAS domain Sfum_2443 PF00072 Response regulator receiver domain Sfum_2443 PF00512 His Kinase A (phospho-acceptor) domain Sfum_2443 PF08448 PAS fold Sfum_2445 PF05746 DALR anticodon binding domain Sfum_2445 PF02092 Glycyl-tRNA synthetase beta subunit Sfum_2446 PF02091 Glycyl-tRNA synthetase alpha subunit Sfum_2449 PF00005 ABC transporter Sfum_2450 PF02405 Permease MlaE Sfum_2452 PF13581 Histidine kinase-like ATPase domain Sfum_2453 PF13426 PAS domain Sfum_2453 PF07228 Stage II sporulation protein E (SpoIIE) Sfum_2454 PF13533 Biotin-lipoyl like Sfum_2456 PF04055 Radical SAM superfamily Sfum_2456 PF13186 Iron-sulfur cluster-binding domain Sfum_2460 PF02881 SRP54-type protein, helical bundle domain Sfum_2460 PF00448 SRP54-type protein, GTPase domain Sfum_2461 PF01116 Fructose-bisphosphate aldolase class-II Sfum_2463 PF00107 Zinc-binding dehydrogenase Sfum_2463 PF08240 Alcohol dehydrogenase GroES-like domain Sfum_2464 PF01791 DeoC/LacD family aldolase Sfum_2466 PF13380 CoA binding domain Sfum_2466 PF00583 Acetyltransferase (GNAT) family Sfum_2466 PF13607 Succinyl-CoA ligase like flavodoxin domain Sfum_2468 PF02915 Rubrerythrin Sfum_2470 PF02580 D-Tyr-tRNA(Tyr) deacylase Sfum_2473 PF00731 AIR carboxylase Sfum_2474 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) Sfum_2475 PF00152 tRNA synthetases class II (D, K and N) Sfum_2475 PF01336 OB-fold nucleic acid binding domain Sfum_2488 PF02163 Peptidase family M50 Sfum_2488 PF00571 CBS domain Sfum_2493 PF02421 Ferrous iron transport protein B Sfum_2493 PF07664 Ferrous iron transport protein B C terminus Sfum_2493 PF07670 Nucleoside recognition Sfum_2493 PF17910 FeoB cytosolic helical domain Sfum_2493 PF04023 FeoA domain Sfum_2494 PF01761 3-dehydroquinate synthase Sfum_2495 PF00512 His Kinase A (phospho-acceptor) domain Sfum_2495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_2495 PF00989 PAS fold Sfum_2498 PF02687 FtsX-like permease family Sfum_2498 PF12704 MacB-like periplasmic core domain Sfum_2499 PF00589 Phage integrase family Sfum_2499 PF02899 Phage integrase, N-terminal SAM-like domain Sfum_2507 PF00005 ABC transporter Sfum_2509 PF00111 2Fe-2S iron-sulfur cluster binding domain Sfum_2509 PF01799 [2Fe-2S] binding domain Sfum_2510 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Sfum_2510 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Sfum_2511 PF00941 FAD binding domain in molybdopterin dehydrogenase Sfum_2511 PF03450 CO dehydrogenase flavoprotein C-terminal domain Sfum_2512 PF01965 DJ-1/PfpI family Sfum_2514 PF08704 tRNA methyltransferase complex GCD14 subunit Sfum_2515 PF02608 ABC transporter substrate-binding protein PnrA-like Sfum_2516 PF00005 ABC transporter Sfum_2519 PF01814 Hemerythrin HHE cation binding domain Sfum_2520 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Sfum_2521 PF00005 ABC transporter Sfum_2523 PF00933 Glycosyl hydrolase family 3 N terminal domain Sfum_2524 PF00149 Calcineurin-like phosphoesterase Sfum_2525 PF03979 Sigma-70 factor, region 1.1 Sfum_2525 PF04539 Sigma-70 region 3 Sfum_2525 PF04545 Sigma-70, region 4 Sfum_2525 PF04542 Sigma-70 region 2 Sfum_2525 PF00140 Sigma-70 factor, region 1.2 Sfum_2525 PF04546 Sigma-70, non-essential region Sfum_2526 PF01018 GTP1/OBG Sfum_2526 PF01926 50S ribosome-binding GTPase Sfum_2527 PF01411 tRNA synthetases class II (A) Sfum_2527 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Sfum_2527 PF02272 DHHA1 domain Sfum_2528 PF00154 recA bacterial DNA recombination protein Sfum_2530 PF02464 Competence-damaged protein Sfum_2530 PF00994 Probable molybdopterin binding domain Sfum_2530 PF18146 Damage-inducible protein CinA KH domain Sfum_2531 PF01969 Protein of unknown function DUF111 Sfum_2532 PF07669 Eco57I restriction-modification methylase Sfum_2533 PF06616 BsuBI/PstI restriction endonuclease domain Sfum_2533 PF17728 BsuBI/PstI restriction endonuclease HTH domain Sfum_2534 PF14338 Mrr N-terminal domain Sfum_2534 PF04471 Restriction endonuclease Sfum_2536 PF03793 PASTA domain Sfum_2536 PF00069 Protein kinase domain Sfum_2537 PF00069 Protein kinase domain Sfum_2537 PF03793 PASTA domain Sfum_2541 PF00498 FHA domain Sfum_2541 PF12773 Double zinc ribbon Sfum_2542 PF01137 RNA 3'-terminal phosphate cyclase Sfum_2542 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain Sfum_2547 PF03190 Protein of unknown function, DUF255 Sfum_2548 PF08534 Redoxin Sfum_2553 PF07963 Prokaryotic N-terminal methylation motif Sfum_2553 PF11612 Type II secretion system (T2SS), protein J Sfum_2557 PF05567 Neisseria PilC beta-propeller domain Sfum_2558 PF14245 Type IV pilin PilA Sfum_2558 PF07963 Prokaryotic N-terminal methylation motif Sfum_2560 PF13426 PAS domain Sfum_2560 PF00512 His Kinase A (phospho-acceptor) domain Sfum_2560 PF00989 PAS fold Sfum_2560 PF13188 PAS domain Sfum_2560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_2561 PF03328 HpcH/HpaI aldolase/citrate lyase family Sfum_2562 PF02896 PEP-utilising enzyme, TIM barrel domain Sfum_2562 PF00391 PEP-utilising enzyme, mobile domain Sfum_2562 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Sfum_2563 PF00809 Pterin binding enzyme Sfum_2564 PF04060 Putative Fe-S cluster Sfum_2564 PF03599 CO dehydrogenase/acetyl-CoA synthase delta subunit Sfum_2565 PF18537 Carbon monoxide dehydrogenase subunit alpha N-terminal domain Sfum_2565 PF03598 CO dehydrogenase/acetyl-CoA synthase complex beta subunit Sfum_2566 PF03063 Prismane/CO dehydrogenase family Sfum_2567 PF03599 CO dehydrogenase/acetyl-CoA synthase delta subunit Sfum_2570 PF06965 Na+/H+ antiporter 1 Sfum_2571 PF01641 SelR domain Sfum_2572 PF01625 Peptide methionine sulfoxide reductase Sfum_2574 PF01545 Cation efflux family Sfum_2574 PF16916 Dimerisation domain of Zinc Transporter Sfum_2578 PF01966 HD domain Sfum_2578 PF12072 Domain of unknown function (DUF3552) Sfum_2578 PF00013 KH domain Sfum_2580 PF01380 SIS domain Sfum_2581 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain Sfum_2581 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain Sfum_2582 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Sfum_2582 PF02874 ATP synthase alpha/beta family, beta-barrel domain Sfum_2583 PF00231 ATP synthase Sfum_2584 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Sfum_2584 PF02874 ATP synthase alpha/beta family, beta-barrel domain Sfum_2584 PF00306 ATP synthase alpha/beta chain, C terminal domain Sfum_2585 PF00213 ATP synthase delta (OSCP) subunit Sfum_2586 PF00430 ATP synthase B/B' CF(0) Sfum_2588 PF01098 Cell cycle protein Sfum_2589 PF00905 Penicillin binding protein transpeptidase domain Sfum_2589 PF03717 Penicillin-binding Protein dimerisation domain Sfum_2591 PF04085 rod shape-determining protein MreC Sfum_2594 PF00468 Ribosomal protein L34 Sfum_2595 PF00825 Ribonuclease P Sfum_2596 PF01809 Putative membrane protein insertion efficiency factor Sfum_2597 PF02096 60Kd inner membrane protein Sfum_2597 PF14849 YidC periplasmic domain Sfum_2598 PF14804 Jag N-terminus Sfum_2598 PF01424 R3H domain Sfum_2599 PF01926 50S ribosome-binding GTPase Sfum_2599 PF10396 GTP-binding protein TrmE N-terminus Sfum_2599 PF12631 MnmE helical domain Sfum_2601 PF02527 rRNA small subunit methyltransferase G Sfum_2602 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family Sfum_2602 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain Sfum_2603 PF00550 Phosphopantetheine attachment site Sfum_2603 PF00857 Isochorismatase family Sfum_2605 PF13614 AAA domain Sfum_2606 PF17762 HTH domain found in ParB protein Sfum_2606 PF02195 ParB-like nuclease domain Sfum_2608 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase Sfum_2609 PF02654 Cobalamin-5-phosphate synthase Sfum_2610 PF08279 HTH domain Sfum_2610 PF02237 Biotin protein ligase C terminal domain Sfum_2610 PF03099 Biotin/lipoate A/B protein ligase family Sfum_2611 PF01258 Prokaryotic dksA/traR C4-type zinc finger Sfum_2612 PF01967 MoaC family Sfum_2613 PF00226 DnaJ domain Sfum_2613 PF00684 DnaJ central domain Sfum_2613 PF01556 DnaJ C terminal domain Sfum_2616 PF00005 ABC transporter Sfum_2616 PF00664 ABC transporter transmembrane region Sfum_2617 PF00512 His Kinase A (phospho-acceptor) domain Sfum_2617 PF13492 GAF domain Sfum_2617 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_2617 PF02702 Osmosensitive K+ channel His kinase sensor domain Sfum_2617 PF13493 Domain of unknown function (DUF4118) Sfum_2618 PF02669 K+-transporting ATPase, c chain Sfum_2620 PF03814 Potassium-transporting ATPase A subunit Sfum_2621 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_2621 PF00672 HAMP domain Sfum_2621 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB Sfum_2621 PF00512 His Kinase A (phospho-acceptor) domain Sfum_2621 PF08448 PAS fold Sfum_2622 PF00158 Sigma-54 interaction domain Sfum_2622 PF00072 Response regulator receiver domain Sfum_2622 PF02954 Bacterial regulatory protein, Fis family Sfum_2623 PF01965 DJ-1/PfpI family Sfum_2624 PF05050 Methyltransferase FkbM domain Sfum_2629 PF07568 Histidine kinase Sfum_2629 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_2629 PF12282 Signal transduction histidine kinase Sfum_2630 PF07977 FabA-like domain Sfum_2631 PF02801 Beta-ketoacyl synthase, C-terminal domain Sfum_2631 PF00109 Beta-ketoacyl synthase, N-terminal domain Sfum_2632 PF00550 Phosphopantetheine attachment site Sfum_2633 PF13193 AMP-binding enzyme C-terminal domain Sfum_2633 PF00501 AMP-binding enzyme Sfum_2637 PF01078 Magnesium chelatase, subunit ChlI Sfum_2637 PF13335 Magnesium chelatase, subunit ChlI C-terminal Sfum_2638 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_2638 PF12282 Signal transduction histidine kinase Sfum_2638 PF07568 Histidine kinase Sfum_2639 PF13188 PAS domain Sfum_2639 PF00072 Response regulator receiver domain Sfum_2639 PF08448 PAS fold Sfum_2639 PF00512 His Kinase A (phospho-acceptor) domain Sfum_2639 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_2642 PF00009 Elongation factor Tu GTP binding domain Sfum_2642 PF16658 Class II release factor RF3, C-terminal domain Sfum_2643 PF00271 Helicase conserved C-terminal domain Sfum_2643 PF00270 DEAD/DEAH box helicase Sfum_2644 PF04055 Radical SAM superfamily Sfum_2644 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family Sfum_2645 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Sfum_2645 PF07992 Pyridine nucleotide-disulphide oxidoreductase Sfum_2646 PF00364 Biotin-requiring enzyme Sfum_2646 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Sfum_2646 PF02817 e3 binding domain Sfum_2647 PF02780 Transketolase, C-terminal domain Sfum_2647 PF02779 Transketolase, pyrimidine binding domain Sfum_2648 PF00676 Dehydrogenase E1 component Sfum_2650 PF08448 PAS fold Sfum_2650 PF00990 Diguanylate cyclase, GGDEF domain Sfum_2654 PF06123 Inner membrane protein CreD Sfum_2656 PF00486 Transcriptional regulatory protein, C terminal Sfum_2656 PF00072 Response regulator receiver domain Sfum_2657 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_2657 PF00672 HAMP domain Sfum_2657 PF00512 His Kinase A (phospho-acceptor) domain Sfum_2658 PF13188 PAS domain Sfum_2658 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_2658 PF08448 PAS fold Sfum_2658 PF00072 Response regulator receiver domain Sfum_2658 PF00512 His Kinase A (phospho-acceptor) domain Sfum_2666 PF00391 PEP-utilising enzyme, mobile domain Sfum_2666 PF02896 PEP-utilising enzyme, TIM barrel domain Sfum_2666 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Sfum_2669 PF12557 Cob(I)alamin adenosyltransferase N terminal Sfum_2669 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP Sfum_2670 PF01053 Cys/Met metabolism PLP-dependent enzyme Sfum_2671 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Sfum_2675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_2675 PF00512 His Kinase A (phospho-acceptor) domain Sfum_2676 PF00912 Transglycosylase Sfum_2676 PF00905 Penicillin binding protein transpeptidase domain Sfum_2676 PF17092 Penicillin-binding protein OB-like domain Sfum_2677 PF13307 Helicase C-terminal domain Sfum_2677 PF06733 DEAD_2 Sfum_2681 PF00291 Pyridoxal-phosphate dependent enzyme Sfum_2682 PF00132 Bacterial transferase hexapeptide (six repeats) Sfum_2684 PF01592 NifU-like N terminal domain Sfum_2684 PF01106 NifU-like domain Sfum_2684 PF04324 BFD-like [2Fe-2S] binding domain Sfum_2686 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Sfum_2686 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Sfum_2687 PF01268 Formate--tetrahydrofolate ligase Sfum_2688 PF00712 DNA polymerase III beta subunit, N-terminal domain Sfum_2688 PF02767 DNA polymerase III beta subunit, central domain Sfum_2688 PF02768 DNA polymerase III beta subunit, C-terminal domain Sfum_2689 PF00204 DNA gyrase B Sfum_2689 PF00986 DNA gyrase B subunit, carboxyl terminus Sfum_2689 PF18053 DNA gyrase B subunit insert domain Sfum_2689 PF01751 Toprim domain Sfum_2689 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_2690 PF03989 DNA gyrase C-terminal domain, beta-propeller Sfum_2690 PF00521 DNA gyrase/topoisomerase IV, subunit A Sfum_2691 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus Sfum_2691 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Sfum_2693 PF02424 ApbE family Sfum_2694 PF13187 4Fe-4S dicluster domain Sfum_2694 PF04060 Putative Fe-S cluster Sfum_2695 PF02508 Rnf-Nqr subunit, membrane protein Sfum_2696 PF02508 Rnf-Nqr subunit, membrane protein Sfum_2697 PF04205 FMN-binding domain Sfum_2698 PF03116 NQR2, RnfD, RnfE family Sfum_2699 PF10531 SLBB domain Sfum_2699 PF13375 RnfC Barrel sandwich hybrid domain Sfum_2699 PF13237 4Fe-4S dicluster domain Sfum_2699 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Sfum_2704 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Sfum_2704 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Sfum_2704 PF00037 4Fe-4S binding domain Sfum_2705 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Sfum_2705 PF12838 4Fe-4S dicluster domain Sfum_2705 PF00384 Molybdopterin oxidoreductase Sfum_2705 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Sfum_2705 PF01568 Molydopterin dinucleotide binding domain Sfum_2706 PF00384 Molybdopterin oxidoreductase Sfum_2706 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Sfum_2706 PF01568 Molydopterin dinucleotide binding domain Sfum_2707 PF01226 Formate/nitrite transporter Sfum_2710 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Sfum_2713 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Sfum_2713 PF00037 4Fe-4S binding domain Sfum_2713 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Sfum_2714 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Sfum_2714 PF01568 Molydopterin dinucleotide binding domain Sfum_2714 PF13237 4Fe-4S dicluster domain Sfum_2714 PF00384 Molybdopterin oxidoreductase Sfum_2714 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Sfum_2715 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Sfum_2716 PF00374 Nickel-dependent hydrogenase Sfum_2720 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Sfum_2721 PF18317 Shikimate 5'-dehydrogenase C-terminal domain Sfum_2721 PF01488 Shikimate / quinate 5-dehydrogenase Sfum_2721 PF08501 Shikimate dehydrogenase substrate binding domain Sfum_2722 PF01487 Type I 3-dehydroquinase Sfum_2723 PF00800 Prephenate dehydratase Sfum_2723 PF01817 Chorismate mutase type II Sfum_2723 PF01842 ACT domain Sfum_2724 PF01959 3-dehydroquinate synthase II Sfum_2726 PF01139 tRNA-splicing ligase RtcB Sfum_2727 PF07683 Cobalamin synthesis protein cobW C-terminal domain Sfum_2727 PF02492 CobW/HypB/UreG, nucleotide-binding domain Sfum_2731 PF00072 Response regulator receiver domain Sfum_2733 PF14815 NUDIX domain Sfum_2733 PF00730 HhH-GPD superfamily base excision DNA repair protein Sfum_2733 PF00633 Helix-hairpin-helix motif Sfum_2734 PF00005 ABC transporter Sfum_2735 PF00950 ABC 3 transport family Sfum_2736 PF13243 Squalene-hopene cyclase C-terminal domain Sfum_2736 PF13249 Squalene-hopene cyclase N-terminal domain Sfum_2737 PF02548 Ketopantoate hydroxymethyltransferase Sfum_2739 PF00005 ABC transporter Sfum_2740 PF01032 FecCD transport family Sfum_2741 PF01497 Periplasmic binding protein Sfum_2744 PF00593 TonB dependent receptor Sfum_2744 PF07715 TonB-dependent Receptor Plug Domain Sfum_2745 PF06180 Cobalt chelatase (CbiK) Sfum_2748 PF01370 NAD dependent epimerase/dehydratase family Sfum_2753 PF02558 Ketopantoate reductase PanE/ApbA Sfum_2753 PF08546 Ketopantoate reductase PanE/ApbA C terminal Sfum_2755 PF00953 Glycosyl transferase family 4 Sfum_2755 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 Sfum_2756 PF04101 Glycosyltransferase family 28 C-terminal domain Sfum_2756 PF03033 Glycosyltransferase family 28 N-terminal domain Sfum_2757 PF01300 Telomere recombination Sfum_2758 PF00731 AIR carboxylase Sfum_2759 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Sfum_2759 PF02843 Phosphoribosylglycinamide synthetase, C domain Sfum_2759 PF02844 Phosphoribosylglycinamide synthetase, N domain Sfum_2760 PF01808 AICARFT/IMPCHase bienzyme Sfum_2760 PF02142 MGS-like domain Sfum_2761 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Sfum_2763 PF00989 PAS fold Sfum_2763 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_2763 PF00512 His Kinase A (phospho-acceptor) domain Sfum_2764 PF00158 Sigma-54 interaction domain Sfum_2764 PF00072 Response regulator receiver domain Sfum_2768 PF01544 CorA-like Mg2+ transporter protein Sfum_2772 PF02954 Bacterial regulatory protein, Fis family Sfum_2772 PF00072 Response regulator receiver domain Sfum_2772 PF00158 Sigma-54 interaction domain Sfum_2776 PF01964 Radical SAM ThiC family Sfum_2777 PF00390 Malic enzyme, N-terminal domain Sfum_2777 PF03949 Malic enzyme, NAD binding domain Sfum_2777 PF01515 Phosphate acetyl/butaryl transferase Sfum_2784 PF00009 Elongation factor Tu GTP binding domain Sfum_2784 PF03764 Elongation factor G, domain IV Sfum_2784 PF14492 Elongation Factor G, domain II Sfum_2784 PF00679 Elongation factor G C-terminus Sfum_2784 PF03144 Elongation factor Tu domain 2 Sfum_2788 PF14437 MafB19-like deaminase Sfum_2789 PF12169 DNA polymerase III subunits gamma and tau domain III Sfum_2790 PF02575 YbaB/EbfC DNA-binding family Sfum_2791 PF02132 RecR protein Sfum_2791 PF13662 Toprim domain Sfum_2792 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Sfum_2794 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Sfum_2794 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II Sfum_2795 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Sfum_2797 PF00145 C-5 cytosine-specific DNA methylase Sfum_2802 PF02743 Cache domain Sfum_2802 PF00672 HAMP domain Sfum_2802 PF00211 Adenylate and Guanylate cyclase catalytic domain Sfum_2805 PF01597 Glycine cleavage H-protein Sfum_2806 PF02954 Bacterial regulatory protein, Fis family Sfum_2806 PF00158 Sigma-54 interaction domain Sfum_2806 PF00072 Response regulator receiver domain Sfum_2807 PF00989 PAS fold Sfum_2807 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_2807 PF00512 His Kinase A (phospho-acceptor) domain Sfum_2808 PF00266 Aminotransferase class-V Sfum_2809 PF02321 Outer membrane efflux protein Sfum_2810 PF02687 FtsX-like permease family Sfum_2810 PF12704 MacB-like periplasmic core domain Sfum_2810 PF00005 ABC transporter Sfum_2817 PF12704 MacB-like periplasmic core domain Sfum_2817 PF02687 FtsX-like permease family Sfum_2817 PF00005 ABC transporter Sfum_2819 PF02001 Protein of unknown function DUF134 Sfum_2821 PF00149 Calcineurin-like phosphoesterase Sfum_2821 PF12320 Type 5 capsule protein repressor C-terminal domain Sfum_2822 PF13476 AAA domain Sfum_2824 PF18395 Cas3 C-terminal domain Sfum_2824 PF18019 HD domain Sfum_2827 PF09344 CT1975-like protein Sfum_2829 PF08798 CRISPR associated protein Sfum_2830 PF01867 CRISPR associated protein Cas1 Sfum_2831 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) Sfum_2832 PF01695 IstB-like ATP binding protein Sfum_2833 PF00665 Integrase core domain Sfum_2833 PF02796 Helix-turn-helix domain of resolvase Sfum_2834 PF01209 ubiE/COQ5 methyltransferase family Sfum_2837 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_2837 PF00512 His Kinase A (phospho-acceptor) domain Sfum_2837 PF08446 PAS fold Sfum_2837 PF00360 Phytochrome region Sfum_2837 PF01590 GAF domain Sfum_2845 PF12146 Serine aminopeptidase, S33 Sfum_2848 PF01230 HIT domain Sfum_2850 PF01180 Dihydroorotate dehydrogenase Sfum_2851 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B Sfum_2851 PF00970 Oxidoreductase FAD-binding domain Sfum_2851 PF00175 Oxidoreductase NAD-binding domain Sfum_2856 PF01555 DNA methylase Sfum_2857 PF00004 ATPase family associated with various cellular activities (AAA) Sfum_2859 PF00580 UvrD/REP helicase N-terminal domain Sfum_2859 PF13361 UvrD-like helicase C-terminal domain Sfum_2860 PF00011 Hsp20/alpha crystallin family Sfum_2866 PF02954 Bacterial regulatory protein, Fis family Sfum_2866 PF00072 Response regulator receiver domain Sfum_2866 PF00158 Sigma-54 interaction domain Sfum_2873 PF07992 Pyridine nucleotide-disulphide oxidoreductase Sfum_2873 PF18267 Rubredoxin NAD+ reductase C-terminal domain Sfum_2873 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Sfum_2873 PF04324 BFD-like [2Fe-2S] binding domain Sfum_2875 PF03063 Prismane/CO dehydrogenase family Sfum_2876 PF13229 Right handed beta helix region Sfum_2880 PF17284 Spermidine synthase tetramerisation domain Sfum_2881 PF01844 HNH endonuclease Sfum_2882 PF00849 RNA pseudouridylate synthase Sfum_2884 PF01022 Bacterial regulatory protein, arsR family Sfum_2885 PF11412 Disulphide bond corrector protein DsbC Sfum_2885 PF02683 Cytochrome C biogenesis protein transmembrane region Sfum_2886 PF12849 PBP superfamily domain Sfum_2887 PF00528 Binding-protein-dependent transport system inner membrane component Sfum_2888 PF00528 Binding-protein-dependent transport system inner membrane component Sfum_2889 PF01895 PhoU domain Sfum_2890 PF00005 ABC transporter Sfum_2891 PF00989 PAS fold Sfum_2891 PF00512 His Kinase A (phospho-acceptor) domain Sfum_2891 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_2891 PF16736 Single Cache-like Sfum_2892 PF00072 Response regulator receiver domain Sfum_2892 PF00486 Transcriptional regulatory protein, C terminal Sfum_2894 PF02142 MGS-like domain Sfum_2895 PF00266 Aminotransferase class-V Sfum_2896 PF13419 Haloacid dehalogenase-like hydrolase Sfum_2897 PF00528 Binding-protein-dependent transport system inner membrane component Sfum_2898 PF00005 ABC transporter Sfum_2902 PF02666 Phosphatidylserine decarboxylase Sfum_2903 PF13439 Glycosyltransferase Family 4 Sfum_2903 PF00534 Glycosyl transferases group 1 Sfum_2904 PF01895 PhoU domain Sfum_2906 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Sfum_2908 PF03480 Bacterial extracellular solute-binding protein, family 7 Sfum_2910 PF00350 Dynamin family Sfum_2912 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase Sfum_2913 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Sfum_2913 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Sfum_2913 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Sfum_2913 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Sfum_2919 PF00082 Subtilase family Sfum_2921 PF13186 Iron-sulfur cluster-binding domain Sfum_2921 PF04055 Radical SAM superfamily Sfum_2925 PF00202 Aminotransferase class-III Sfum_2928 PF13419 Haloacid dehalogenase-like hydrolase Sfum_2932 PF00115 Cytochrome C and Quinol oxidase polypeptide I Sfum_2935 PF00301 Rubredoxin Sfum_2941 PF00325 Bacterial regulatory proteins, crp family Sfum_2941 PF00027 Cyclic nucleotide-binding domain Sfum_2942 PF16868 NMT1-like family Sfum_2943 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_2943 PF00072 Response regulator receiver domain Sfum_2943 PF13426 PAS domain Sfum_2944 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Sfum_2944 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Sfum_2945 PF01568 Molydopterin dinucleotide binding domain Sfum_2945 PF00384 Molybdopterin oxidoreductase Sfum_2945 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Sfum_2946 PF12838 4Fe-4S dicluster domain Sfum_2946 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Sfum_2946 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Sfum_2946 PF00384 Molybdopterin oxidoreductase Sfum_2946 PF01568 Molydopterin dinucleotide binding domain Sfum_2948 PF05167 Uncharacterised ACR (DUF711) Sfum_2950 PF01455 HupF/HypC family Sfum_2951 PF01750 Hydrogenase maturation protease Sfum_2952 PF00374 Nickel-dependent hydrogenase Sfum_2953 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal Sfum_2953 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Sfum_2954 PF00072 Response regulator receiver domain Sfum_2954 PF00486 Transcriptional regulatory protein, C terminal Sfum_2955 PF00158 Sigma-54 interaction domain Sfum_2955 PF00072 Response regulator receiver domain Sfum_2955 PF02954 Bacterial regulatory protein, Fis family Sfum_2956 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Sfum_2956 PF00128 Alpha amylase, catalytic domain Sfum_2957 PF00343 Carbohydrate phosphorylase Sfum_2958 PF00365 Phosphofructokinase Sfum_2959 PF00224 Pyruvate kinase, barrel domain Sfum_2959 PF02887 Pyruvate kinase, alpha/beta domain Sfum_2959 PF00391 PEP-utilising enzyme, mobile domain Sfum_2960 PF01979 Amidohydrolase family Sfum_2961 PF01979 Amidohydrolase family Sfum_2962 PF01048 Phosphorylase superfamily Sfum_2963 PF00270 DEAD/DEAH box helicase Sfum_2963 PF04408 Helicase associated domain (HA2) Sfum_2963 PF00271 Helicase conserved C-terminal domain Sfum_2963 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold Sfum_2963 PF11898 Domain of unknown function (DUF3418) Sfum_2968 PF02515 CoA-transferase family III Sfum_2969 PF02515 CoA-transferase family III Sfum_2974 PF12146 Serine aminopeptidase, S33 Sfum_2975 PF00486 Transcriptional regulatory protein, C terminal Sfum_2975 PF00072 Response regulator receiver domain Sfum_2980 PF10369 Small subunit of acetolactate synthase Sfum_2981 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Sfum_2981 PF00205 Thiamine pyrophosphate enzyme, central domain Sfum_2981 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Sfum_2982 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Sfum_2982 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Sfum_2982 PF00205 Thiamine pyrophosphate enzyme, central domain Sfum_2983 PF01842 ACT domain Sfum_2983 PF10369 Small subunit of acetolactate synthase Sfum_2984 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain Sfum_2984 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain Sfum_2985 PF02666 Phosphatidylserine decarboxylase Sfum_2986 PF01066 CDP-alcohol phosphatidyltransferase Sfum_2987 PF00330 Aconitase family (aconitate hydratase) Sfum_2988 PF00694 Aconitase C-terminal domain Sfum_2989 PF00180 Isocitrate/isopropylmalate dehydrogenase Sfum_2990 PF02774 Semialdehyde dehydrogenase, dimerisation domain Sfum_2990 PF01118 Semialdehyde dehydrogenase, NAD binding domain Sfum_2992 PF01467 Cytidylyltransferase-like Sfum_2993 PF13406 Transglycosylase SLT domain Sfum_2994 PF00350 Dynamin family Sfum_2995 PF03030 Inorganic H+ pyrophosphatase Sfum_2996 PF00448 SRP54-type protein, GTPase domain Sfum_2996 PF02881 SRP54-type protein, helical bundle domain Sfum_2996 PF02978 Signal peptide binding domain Sfum_2997 PF00886 Ribosomal protein S16 Sfum_2999 PF05239 PRC-barrel domain Sfum_2999 PF01782 RimM N-terminal domain Sfum_3000 PF01746 tRNA (Guanine-1)-methyltransferase Sfum_3001 PF09936 SAM-dependent RNA methyltransferase Sfum_3002 PF01245 Ribosomal protein L19 Sfum_3003 PF01351 Ribonuclease HII Sfum_3004 PF02021 Uncharacterised protein family UPF0102 Sfum_3005 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Sfum_3008 PF02322 Cytochrome bd terminal oxidase subunit II Sfum_3009 PF01654 Cytochrome bd terminal oxidase subunit I Sfum_3010 PF01177 Asp/Glu/Hydantoin racemase Sfum_3011 PF04389 Peptidase family M28 Sfum_3016 PF12146 Serine aminopeptidase, S33 Sfum_3017 PF00072 Response regulator receiver domain Sfum_3017 PF00486 Transcriptional regulatory protein, C terminal Sfum_3022 PF10369 Small subunit of acetolactate synthase Sfum_3023 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Sfum_3023 PF00205 Thiamine pyrophosphate enzyme, central domain Sfum_3023 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Sfum_3024 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Sfum_3024 PF00205 Thiamine pyrophosphate enzyme, central domain Sfum_3024 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Sfum_3025 PF01842 ACT domain Sfum_3025 PF10369 Small subunit of acetolactate synthase Sfum_3026 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain Sfum_3026 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain Sfum_3027 PF02666 Phosphatidylserine decarboxylase Sfum_3028 PF01066 CDP-alcohol phosphatidyltransferase Sfum_3029 PF00330 Aconitase family (aconitate hydratase) Sfum_3030 PF00694 Aconitase C-terminal domain Sfum_3031 PF00180 Isocitrate/isopropylmalate dehydrogenase Sfum_3032 PF02774 Semialdehyde dehydrogenase, dimerisation domain Sfum_3032 PF01118 Semialdehyde dehydrogenase, NAD binding domain Sfum_3034 PF01467 Cytidylyltransferase-like Sfum_3035 PF13406 Transglycosylase SLT domain Sfum_3036 PF00350 Dynamin family Sfum_3037 PF03030 Inorganic H+ pyrophosphatase Sfum_3038 PF00448 SRP54-type protein, GTPase domain Sfum_3038 PF02978 Signal peptide binding domain Sfum_3038 PF02881 SRP54-type protein, helical bundle domain Sfum_3039 PF00886 Ribosomal protein S16 Sfum_3041 PF01782 RimM N-terminal domain Sfum_3041 PF05239 PRC-barrel domain Sfum_3042 PF01746 tRNA (Guanine-1)-methyltransferase Sfum_3043 PF09936 SAM-dependent RNA methyltransferase Sfum_3044 PF01245 Ribosomal protein L19 Sfum_3045 PF01351 Ribonuclease HII Sfum_3046 PF02021 Uncharacterised protein family UPF0102 Sfum_3047 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Sfum_3050 PF02322 Cytochrome bd terminal oxidase subunit II Sfum_3051 PF01654 Cytochrome bd terminal oxidase subunit I Sfum_3052 PF01177 Asp/Glu/Hydantoin racemase Sfum_3053 PF04389 Peptidase family M28 Sfum_3054 PF02308 MgtC family Sfum_3055 PF07724 AAA domain (Cdc48 subfamily) Sfum_3055 PF10431 C-terminal, D2-small domain, of ClpB protein Sfum_3055 PF06689 ClpX C4-type zinc finger Sfum_3056 PF04055 Radical SAM superfamily Sfum_3056 PF13186 Iron-sulfur cluster-binding domain Sfum_3057 PF00490 Delta-aminolevulinic acid dehydratase Sfum_3058 PF04055 Radical SAM superfamily Sfum_3058 PF06463 Molybdenum Cofactor Synthesis C Sfum_3063 PF03572 Peptidase family S41 Sfum_3063 PF13180 PDZ domain Sfum_3066 PF00005 ABC transporter Sfum_3066 PF09383 NIL domain Sfum_3070 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain Sfum_3070 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain Sfum_3071 PF01790 Prolipoprotein diacylglyceryl transferase Sfum_3073 PF00171 Aldehyde dehydrogenase family Sfum_3074 PF03205 Molybdopterin guanine dinucleotide synthesis protein B Sfum_3075 PF12804 MobA-like NTP transferase domain Sfum_3076 PF00994 Probable molybdopterin binding domain Sfum_3076 PF03454 MoeA C-terminal region (domain IV) Sfum_3076 PF03453 MoeA N-terminal region (domain I and II) Sfum_3077 PF00483 Nucleotidyl transferase Sfum_3077 PF01066 CDP-alcohol phosphatidyltransferase Sfum_3083 PF02142 MGS-like domain Sfum_3083 PF01808 AICARFT/IMPCHase bienzyme Sfum_3084 PF02441 Flavoprotein Sfum_3085 PF01791 DeoC/LacD family aldolase Sfum_3088 PF04055 Radical SAM superfamily Sfum_3089 PF04055 Radical SAM superfamily Sfum_3090 PF17938 Tetracyclin repressor-like, C-terminal domain Sfum_3090 PF00440 Bacterial regulatory proteins, tetR family Sfum_3096 PF02463 RecF/RecN/SMC N terminal domain Sfum_3098 PF01063 Amino-transferase class IV Sfum_3100 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Sfum_3100 PF01842 ACT domain Sfum_3100 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Sfum_3101 PF00005 ABC transporter Sfum_3102 PF00005 ABC transporter Sfum_3102 PF12399 Branched-chain amino acid ATP-binding cassette transporter Sfum_3103 PF02653 Branched-chain amino acid transport system / permease component Sfum_3103 PF11862 Domain of unknown function (DUF3382) Sfum_3104 PF02653 Branched-chain amino acid transport system / permease component Sfum_3105 PF13458 Periplasmic binding protein Sfum_3106 PF01262 Alanine dehydrogenase/PNT, C-terminal domain Sfum_3106 PF05222 Alanine dehydrogenase/PNT, N-terminal domain Sfum_3109 PF00512 His Kinase A (phospho-acceptor) domain Sfum_3109 PF00989 PAS fold Sfum_3109 PF16736 Single Cache-like Sfum_3109 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_3111 PF00072 Response regulator receiver domain Sfum_3111 PF02954 Bacterial regulatory protein, Fis family Sfum_3111 PF00158 Sigma-54 interaction domain Sfum_3112 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_3112 PF00512 His Kinase A (phospho-acceptor) domain Sfum_3112 PF08448 PAS fold Sfum_3112 PF13188 PAS domain Sfum_3112 PF00072 Response regulator receiver domain Sfum_3114 PF00535 Glycosyl transferase family 2 Sfum_3115 PF04794 YdjC-like protein Sfum_3127 PF02310 B12 binding domain Sfum_3127 PF04055 Radical SAM superfamily Sfum_3133 PF07992 Pyridine nucleotide-disulphide oxidoreductase Sfum_3133 PF13192 Thioredoxin domain Sfum_3136 PF11890 Domain of unknown function (DUF3410) Sfum_3136 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Sfum_3136 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Sfum_3138 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II Sfum_3138 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Sfum_3138 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Sfum_3139 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Sfum_3141 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal Sfum_3141 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal Sfum_3142 PF07992 Pyridine nucleotide-disulphide oxidoreductase Sfum_3142 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Sfum_3145 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Sfum_3148 PF00392 Bacterial regulatory proteins, gntR family Sfum_3148 PF07729 FCD domain Sfum_3152 PF01209 ubiE/COQ5 methyltransferase family Sfum_3155 PF04389 Peptidase family M28 Sfum_3155 PF02225 PA domain Sfum_3158 PF04055 Radical SAM superfamily Sfum_3158 PF06463 Molybdenum Cofactor Synthesis C Sfum_3159 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Sfum_3159 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Sfum_3160 PF01869 BadF/BadG/BcrA/BcrD ATPase family Sfum_3161 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component Sfum_3162 PF02653 Branched-chain amino acid transport system / permease component Sfum_3163 PF00497 Bacterial extracellular solute-binding proteins, family 3 Sfum_3164 PF00528 Binding-protein-dependent transport system inner membrane component Sfum_3165 PF00528 Binding-protein-dependent transport system inner membrane component Sfum_3166 PF00005 ABC transporter Sfum_3169 PF01206 Sulfurtransferase TusA Sfum_3175 PF03176 MMPL family Sfum_3178 PF05922 Peptidase inhibitor I9 Sfum_3178 PF00082 Subtilase family Sfum_3182 PF01687 Riboflavin kinase Sfum_3182 PF06574 FAD synthetase Sfum_3183 PF01926 50S ribosome-binding GTPase Sfum_3183 PF16360 GTP-binding GTPase Middle Region Sfum_3183 PF13167 GTP-binding GTPase N-terminal Sfum_3184 PF00772 DnaB-like helicase N terminal domain Sfum_3184 PF03796 DnaB-like helicase C terminal domain Sfum_3185 PF01281 Ribosomal protein L9, N-terminal domain Sfum_3185 PF03948 Ribosomal protein L9, C-terminal domain Sfum_3187 PF01084 Ribosomal protein S18 Sfum_3188 PF01250 Ribosomal protein S6 Sfum_3195 PF00384 Molybdopterin oxidoreductase Sfum_3195 PF01568 Molydopterin dinucleotide binding domain Sfum_3195 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Sfum_3197 PF00004 ATPase family associated with various cellular activities (AAA) Sfum_3197 PF17862 AAA+ lid domain Sfum_3197 PF06480 FtsH Extracellular Sfum_3197 PF01434 Peptidase family M41 Sfum_3200 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Sfum_3202 PF03900 Porphobilinogen deaminase, C-terminal domain Sfum_3202 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain Sfum_3206 PF13580 SIS domain Sfum_3211 PF07730 Histidine kinase Sfum_3211 PF17200 Single Cache domain 2 Sfum_3214 PF00313 'Cold-shock' DNA-binding domain Sfum_3215 PF08338 Domain of unknown function (DUF1731) Sfum_3215 PF01370 NAD dependent epimerase/dehydratase family Sfum_3218 PF13192 Thioredoxin domain Sfum_3218 PF07992 Pyridine nucleotide-disulphide oxidoreductase Sfum_3219 PF00462 Glutaredoxin Sfum_3222 PF00301 Rubredoxin Sfum_3223 PF00403 Heavy-metal-associated domain Sfum_3228 PF00675 Insulinase (Peptidase family M16) Sfum_3228 PF05193 Peptidase M16 inactive domain Sfum_3231 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Sfum_3233 PF00919 Uncharacterized protein family UPF0004 Sfum_3233 PF04055 Radical SAM superfamily Sfum_3233 PF01938 TRAM domain Sfum_3234 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) Sfum_3236 PF01966 HD domain Sfum_3237 PF03793 PASTA domain Sfum_3237 PF00069 Protein kinase domain Sfum_3240 PF13340 Putative transposase of IS4/5 family (DUF4096) Sfum_3243 PF17200 Single Cache domain 2 Sfum_3243 PF07730 Histidine kinase Sfum_3244 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Sfum_3244 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Sfum_3246 PF03576 Peptidase family S58 Sfum_3250 PF00664 ABC transporter transmembrane region Sfum_3250 PF00005 ABC transporter Sfum_3252 PF02915 Rubrerythrin Sfum_3253 PF00258 Flavodoxin Sfum_3253 PF00753 Metallo-beta-lactamase superfamily Sfum_3254 PF07730 Histidine kinase Sfum_3254 PF17200 Single Cache domain 2 Sfum_3255 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family Sfum_3256 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component Sfum_3263 PF01209 ubiE/COQ5 methyltransferase family Sfum_3265 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Sfum_3265 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Sfum_3268 PF02954 Bacterial regulatory protein, Fis family Sfum_3268 PF00072 Response regulator receiver domain Sfum_3268 PF00158 Sigma-54 interaction domain Sfum_3269 PF00512 His Kinase A (phospho-acceptor) domain Sfum_3269 PF00989 PAS fold Sfum_3269 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_3272 PF08241 Methyltransferase domain Sfum_3273 PF01209 ubiE/COQ5 methyltransferase family Sfum_3274 PF00830 Ribosomal L28 family Sfum_3277 PF17863 AAA lid domain Sfum_3277 PF07726 ATPase family associated with various cellular activities (AAA) Sfum_3278 PF02769 AIR synthase related protein, C-terminal domain Sfum_3278 PF00586 AIR synthase related protein, N-terminal domain Sfum_3279 PF02618 YceG-like family Sfum_3280 PF12804 MobA-like NTP transferase domain Sfum_3280 PF00132 Bacterial transferase hexapeptide (six repeats) Sfum_3281 PF00005 ABC transporter Sfum_3282 PF00550 Phosphopantetheine attachment site Sfum_3282 PF16197 Ketoacyl-synthetase C-terminal extension Sfum_3282 PF08240 Alcohol dehydrogenase GroES-like domain Sfum_3282 PF02801 Beta-ketoacyl synthase, C-terminal domain Sfum_3282 PF14765 Polyketide synthase dehydratase Sfum_3282 PF00698 Acyl transferase domain Sfum_3282 PF08659 KR domain Sfum_3282 PF00109 Beta-ketoacyl synthase, N-terminal domain Sfum_3283 PF04002 RadC-like JAB domain Sfum_3284 PF05494 MlaC protein Sfum_3285 PF00698 Acyl transferase domain Sfum_3286 PF13247 4Fe-4S dicluster domain Sfum_3286 PF12800 4Fe-4S binding domain Sfum_3287 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Sfum_3287 PF10518 TAT (twin-arginine translocation) pathway signal sequence Sfum_3287 PF01568 Molydopterin dinucleotide binding domain Sfum_3287 PF00384 Molybdopterin oxidoreductase Sfum_3291 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Sfum_3291 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Sfum_3291 PF02770 Acyl-CoA dehydrogenase, middle domain Sfum_3292 PF00072 Response regulator receiver domain Sfum_3292 PF01966 HD domain Sfum_3292 PF00072 Response regulator receiver domain Sfum_3292 PF01966 HD domain Sfum_3294 PF03975 CheD chemotactic sensory transduction Sfum_3298 PF03091 CutA1 divalent ion tolerance protein Sfum_3299 PF00815 Histidinol dehydrogenase Sfum_3300 PF05036 Sporulation related domain Sfum_3300 PF03330 Lytic transglycolase Sfum_3301 PF00682 HMGL-like Sfum_3302 PF00152 tRNA synthetases class II (D, K and N) Sfum_3302 PF02938 GAD domain Sfum_3302 PF01336 OB-fold nucleic acid binding domain Sfum_3303 PF13393 Histidyl-tRNA synthetase Sfum_3303 PF03129 Anticodon binding domain Sfum_3311 PF00814 Glycoprotease family Sfum_3312 PF00398 Ribosomal RNA adenine dimethylase Sfum_3313 PF03466 LysR substrate binding domain Sfum_3313 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Sfum_3314 PF16326 ABC transporter C-terminal domain Sfum_3314 PF00005 ABC transporter Sfum_3314 PF12848 ABC transporter Sfum_3315 PF13419 Haloacid dehalogenase-like hydrolase Sfum_3316 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Sfum_3316 PF00529 HlyD membrane-fusion protein of T1SS Sfum_3317 PF07690 Major Facilitator Superfamily Sfum_3318 PF00557 Metallopeptidase family M24 Sfum_3318 PF01321 Creatinase/Prolidase N-terminal domain Sfum_3321 PF13614 AAA domain Sfum_3323 PF01556 DnaJ C terminal domain Sfum_3323 PF00684 DnaJ central domain Sfum_3323 PF00226 DnaJ domain Sfum_3324 PF01050 Mannose-6-phosphate isomerase Sfum_3324 PF00483 Nucleotidyl transferase Sfum_3325 PF01050 Mannose-6-phosphate isomerase Sfum_3325 PF00483 Nucleotidyl transferase Sfum_3327 PF00953 Glycosyl transferase family 4 Sfum_3330 PF02350 UDP-N-acetylglucosamine 2-epimerase Sfum_3331 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Sfum_3331 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Sfum_3334 PF00535 Glycosyl transferase family 2 Sfum_3337 PF13439 Glycosyltransferase Family 4 Sfum_3337 PF00534 Glycosyl transferases group 1 Sfum_3338 PF13439 Glycosyltransferase Family 4 Sfum_3338 PF00534 Glycosyl transferases group 1 Sfum_3344 PF13439 Glycosyltransferase Family 4 Sfum_3348 PF00535 Glycosyl transferase family 2 Sfum_3353 PF00535 Glycosyl transferase family 2 Sfum_3353 PF02709 N-terminal domain of galactosyltransferase Sfum_3354 PF00005 ABC transporter Sfum_3354 PF14524 Wzt C-terminal domain Sfum_3356 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Sfum_3356 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Sfum_3356 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Sfum_3358 PF01370 NAD dependent epimerase/dehydratase family Sfum_3360 PF02719 Polysaccharide biosynthesis protein Sfum_3361 PF01370 NAD dependent epimerase/dehydratase family Sfum_3362 PF16363 GDP-mannose 4,6 dehydratase Sfum_3365 PF02938 GAD domain Sfum_3365 PF00152 tRNA synthetases class II (D, K and N) Sfum_3365 PF01336 OB-fold nucleic acid binding domain Sfum_3366 PF01425 Amidase Sfum_3367 PF02934 GatB/GatE catalytic domain Sfum_3367 PF02637 GatB domain Sfum_3369 PF00271 Helicase conserved C-terminal domain Sfum_3369 PF08148 DSHCT (NUC185) domain Sfum_3369 PF00270 DEAD/DEAH box helicase Sfum_3370 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Sfum_3370 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Sfum_3370 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Sfum_3374 PF00912 Transglycosylase Sfum_3375 PF00365 Phosphofructokinase Sfum_3376 PF13460 NAD(P)H-binding Sfum_3376 PF11066 Protein of unknown function (DUF2867) Sfum_3380 PF00873 AcrB/AcrD/AcrF family Sfum_3382 PF13419 Haloacid dehalogenase-like hydrolase Sfum_3387 PF03358 NADPH-dependent FMN reductase Sfum_3392 PF03746 LamB/YcsF family Sfum_3393 PF07286 Protein of unknown function (DUF1445) Sfum_3394 PF02626 Carboxyltransferase domain, subdomain A and B Sfum_3395 PF02682 Carboxyltransferase domain, subdomain C and D Sfum_3396 PF00005 ABC transporter Sfum_3397 PF00005 ABC transporter Sfum_3397 PF12399 Branched-chain amino acid ATP-binding cassette transporter Sfum_3399 PF02653 Branched-chain amino acid transport system / permease component Sfum_3401 PF00586 AIR synthase related protein, N-terminal domain Sfum_3401 PF02769 AIR synthase related protein, C-terminal domain Sfum_3414 PF05343 M42 glutamyl aminopeptidase Sfum_3415 PF07670 Nucleoside recognition Sfum_3417 PF02777 Iron/manganese superoxide dismutases, C-terminal domain Sfum_3417 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain Sfum_3420 PF01925 Sulfite exporter TauE/SafE Sfum_3430 PF00857 Isochorismatase family Sfum_3431 PF00106 short chain dehydrogenase Sfum_3433 PF09997 Predicted membrane protein (DUF2238) Sfum_3436 PF00498 FHA domain Sfum_3436 PF12401 Protein of unknown function (DUF2662) Sfum_3437 PF04389 Peptidase family M28 Sfum_3438 PF01434 Peptidase family M41 Sfum_3438 PF00004 ATPase family associated with various cellular activities (AAA) Sfum_3438 PF06480 FtsH Extracellular Sfum_3438 PF17862 AAA+ lid domain Sfum_3444 PF01613 Flavin reductase like domain Sfum_3446 PF03063 Prismane/CO dehydrogenase family Sfum_3449 PF00080 Copper/zinc superoxide dismutase (SODC) Sfum_3450 PF11700 Vacuole effluxer Atg22 like Sfum_3451 PF02806 Alpha amylase, C-terminal all-beta domain Sfum_3451 PF00128 Alpha amylase, catalytic domain Sfum_3451 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Sfum_3452 PF02446 4-alpha-glucanotransferase Sfum_3454 PF00501 AMP-binding enzyme Sfum_3454 PF13193 AMP-binding enzyme C-terminal domain Sfum_3454 PF16177 Acetyl-coenzyme A synthetase N-terminus Sfum_3455 PF02457 DisA bacterial checkpoint controller nucleotide-binding Sfum_3458 PF09297 NADH pyrophosphatase zinc ribbon domain Sfum_3458 PF00293 NUDIX domain Sfum_3459 PF00440 Bacterial regulatory proteins, tetR family Sfum_3459 PF08359 YsiA-like protein, C-terminal region Sfum_3460 PF00550 Phosphopantetheine attachment site Sfum_3462 PF02381 MraZ protein, putative antitoxin-like Sfum_3463 PF01795 MraW methylase family Sfum_3465 PF03717 Penicillin-binding Protein dimerisation domain Sfum_3465 PF00905 Penicillin binding protein transpeptidase domain Sfum_3466 PF02875 Mur ligase family, glutamate ligase domain Sfum_3466 PF08245 Mur ligase middle domain Sfum_3466 PF01225 Mur ligase family, catalytic domain Sfum_3467 PF08245 Mur ligase middle domain Sfum_3467 PF02875 Mur ligase family, glutamate ligase domain Sfum_3467 PF01225 Mur ligase family, catalytic domain Sfum_3468 PF08245 Mur ligase middle domain Sfum_3469 PF01098 Cell cycle protein Sfum_3470 PF01225 Mur ligase family, catalytic domain Sfum_3470 PF02875 Mur ligase family, glutamate ligase domain Sfum_3470 PF08245 Mur ligase middle domain Sfum_3471 PF01565 FAD binding domain Sfum_3471 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain Sfum_3473 PF02491 SHS2 domain inserted in FTSA Sfum_3474 PF12327 FtsZ family, C-terminal domain Sfum_3474 PF00091 Tubulin/FtsZ family, GTPase domain Sfum_3476 PF01556 DnaJ C terminal domain Sfum_3476 PF00226 DnaJ domain Sfum_3477 PF12390 Selenocysteine synthase N terminal Sfum_3477 PF03841 L-seryl-tRNA selenium transferase Sfum_3479 PF00270 DEAD/DEAH box helicase Sfum_3479 PF02559 CarD-like/TRCF domain Sfum_3479 PF17757 UvrB interaction domain Sfum_3479 PF03461 TRCF domain Sfum_3479 PF00271 Helicase conserved C-terminal domain Sfum_3480 PF00639 PPIC-type PPIASE domain Sfum_3480 PF09312 SurA N-terminal domain Sfum_3482 PF11967 Recombination protein O N terminal Sfum_3482 PF02565 Recombination protein O C terminal Sfum_3483 PF02683 Cytochrome C biogenesis protein transmembrane region Sfum_3483 PF11412 Disulphide bond corrector protein DsbC Sfum_3484 PF00085 Thioredoxin Sfum_3485 PF00483 Nucleotidyl transferase Sfum_3490 PF00005 ABC transporter Sfum_3491 PF00528 Binding-protein-dependent transport system inner membrane component Sfum_3496 PF00005 ABC transporter Sfum_3496 PF08402 TOBE domain Sfum_3497 PF00528 Binding-protein-dependent transport system inner membrane component Sfum_3498 PF00890 FAD binding domain Sfum_3499 PF01266 FAD dependent oxidoreductase Sfum_3499 PF04324 BFD-like [2Fe-2S] binding domain Sfum_3501 PF07690 Major Facilitator Superfamily Sfum_3502 PF08241 Methyltransferase domain Sfum_3503 PF01425 Amidase Sfum_3504 PF02686 Glu-tRNAGln amidotransferase C subunit Sfum_3507 PF02110 Hydroxyethylthiazole kinase family Sfum_3508 PF02581 Thiamine monophosphate synthase Sfum_3509 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Sfum_3509 PF00384 Molybdopterin oxidoreductase Sfum_3509 PF01568 Molydopterin dinucleotide binding domain Sfum_3509 PF00037 4Fe-4S binding domain Sfum_3509 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Sfum_3510 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Sfum_3510 PF01568 Molydopterin dinucleotide binding domain Sfum_3510 PF00384 Molybdopterin oxidoreductase Sfum_3511 PF13247 4Fe-4S dicluster domain Sfum_3512 PF03741 Integral membrane protein TerC family Sfum_3516 PF00749 tRNA synthetases class I (E and Q), catalytic domain Sfum_3516 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain Sfum_3517 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_3517 PF00512 His Kinase A (phospho-acceptor) domain Sfum_3519 PF00989 PAS fold Sfum_3519 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_3519 PF08447 PAS fold Sfum_3519 PF00512 His Kinase A (phospho-acceptor) domain Sfum_3520 PF02146 Sir2 family Sfum_3527 PF07690 Major Facilitator Superfamily Sfum_3532 PF02754 Cysteine-rich domain Sfum_3533 PF07992 Pyridine nucleotide-disulphide oxidoreductase Sfum_3533 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Sfum_3534 PF04324 BFD-like [2Fe-2S] binding domain Sfum_3534 PF07992 Pyridine nucleotide-disulphide oxidoreductase Sfum_3536 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Sfum_3536 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal Sfum_3537 PF00374 Nickel-dependent hydrogenase Sfum_3539 PF03601 Conserved hypothetical protein 698 Sfum_3542 PF02554 Carbon starvation protein CstA Sfum_3542 PF13722 5TM C-terminal transporter carbon starvation CstA Sfum_3543 PF00561 alpha/beta hydrolase fold Sfum_3544 PF00005 ABC transporter Sfum_3544 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Sfum_3545 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Sfum_3545 PF00005 ABC transporter Sfum_3546 PF00535 Glycosyl transferase family 2 Sfum_3547 PF02779 Transketolase, pyrimidine binding domain Sfum_3547 PF16870 2-oxoglutarate dehydrogenase C-terminal Sfum_3547 PF00676 Dehydrogenase E1 component Sfum_3547 PF16078 2-oxoglutarate dehydrogenase N-terminus Sfum_3548 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Sfum_3548 PF00364 Biotin-requiring enzyme Sfum_3548 PF02817 e3 binding domain Sfum_3549 PF07992 Pyridine nucleotide-disulphide oxidoreductase Sfum_3549 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Sfum_3554 PF02585 GlcNAc-PI de-N-acetylase Sfum_3554 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase Sfum_3555 PF00664 ABC transporter transmembrane region Sfum_3555 PF00005 ABC transporter Sfum_3556 PF16363 GDP-mannose 4,6 dehydratase Sfum_3557 PF02146 Sir2 family Sfum_3561 PF04607 Region found in RelA / SpoT proteins Sfum_3561 PF02824 TGS domain Sfum_3561 PF13291 ACT domain Sfum_3563 PF13649 Methyltransferase domain Sfum_3564 PF00072 Response regulator receiver domain Sfum_3566 PF01252 Signal peptidase (SPase) II Sfum_3567 PF00512 His Kinase A (phospho-acceptor) domain Sfum_3567 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_3569 PF01209 ubiE/COQ5 methyltransferase family Sfum_3570 PF00155 Aminotransferase class I and II Sfum_3574 PF02705 K+ potassium transporter Sfum_3577 PF00392 Bacterial regulatory proteins, gntR family Sfum_3577 PF07729 FCD domain Sfum_3578 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Sfum_3578 PF07992 Pyridine nucleotide-disulphide oxidoreductase Sfum_3581 PF01177 Asp/Glu/Hydantoin racemase Sfum_3582 PF00108 Thiolase, N-terminal domain Sfum_3582 PF02803 Thiolase, C-terminal domain Sfum_3583 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Sfum_3583 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Sfum_3584 PF00378 Enoyl-CoA hydratase/isomerase Sfum_3585 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit Sfum_3586 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Sfum_3587 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component Sfum_3588 PF03480 Bacterial extracellular solute-binding protein, family 7 Sfum_3591 PF00342 Phosphoglucose isomerase Sfum_3592 PF00158 Sigma-54 interaction domain Sfum_3592 PF00072 Response regulator receiver domain Sfum_3592 PF02954 Bacterial regulatory protein, Fis family Sfum_3597 PF03773 Predicted permease Sfum_3600 PF03599 CO dehydrogenase/acetyl-CoA synthase delta subunit Sfum_3600 PF04060 Putative Fe-S cluster Sfum_3601 PF01451 Low molecular weight phosphotyrosine protein phosphatase Sfum_3602 PF01758 Sodium Bile acid symporter family Sfum_3604 PF00085 Thioredoxin Sfum_3606 PF01018 GTP1/OBG Sfum_3606 PF04055 Radical SAM superfamily Sfum_3606 PF01926 50S ribosome-binding GTPase Sfum_3607 PF01325 Iron dependent repressor, N-terminal DNA binding domain Sfum_3607 PF02742 Iron dependent repressor, metal binding and dimerisation domain Sfum_3612 PF07683 Cobalamin synthesis protein cobW C-terminal domain Sfum_3612 PF02492 CobW/HypB/UreG, nucleotide-binding domain Sfum_3613 PF10609 NUBPL iron-transfer P-loop NTPase Sfum_3614 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_3614 PF13426 PAS domain Sfum_3614 PF00672 HAMP domain Sfum_3614 PF00512 His Kinase A (phospho-acceptor) domain Sfum_3615 PF00072 Response regulator receiver domain Sfum_3615 PF00486 Transcriptional regulatory protein, C terminal Sfum_3619 PF00958 GMP synthase C terminal domain Sfum_3619 PF00117 Glutamine amidotransferase class-I Sfum_3619 PF02540 NAD synthase Sfum_3620 PF13520 Amino acid permease Sfum_3622 PF03358 NADPH-dependent FMN reductase Sfum_3624 PF00512 His Kinase A (phospho-acceptor) domain Sfum_3624 PF00989 PAS fold Sfum_3624 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_3626 PF01026 TatD related DNase Sfum_3627 PF02545 Maf-like protein Sfum_3628 PF01168 Alanine racemase, N-terminal domain Sfum_3629 PF08032 RNA 2'-O ribose methyltransferase substrate binding Sfum_3629 PF00588 SpoU rRNA Methylase family Sfum_3630 PF00625 Guanylate kinase Sfum_3631 PF04025 Domain of unknown function (DUF370) Sfum_3632 PF08340 Domain of unknown function (DUF1732) Sfum_3632 PF03755 YicC-like family, N-terminal region Sfum_3634 PF01467 Cytidylyltransferase-like Sfum_3634 PF00294 pfkB family carbohydrate kinase Sfum_3635 PF03966 Trm112p-like protein Sfum_3636 PF05103 DivIVA protein Sfum_3637 PF02325 YGGT family Sfum_3639 PF00829 Ribosomal prokaryotic L21 protein Sfum_3640 PF01016 Ribosomal L27 protein Sfum_3641 PF01926 50S ribosome-binding GTPase Sfum_3641 PF01018 GTP1/OBG Sfum_3643 PF00696 Amino acid kinase family Sfum_3643 PF01472 PUA domain Sfum_3644 PF00171 Aldehyde dehydrogenase family Sfum_3645 PF01467 Cytidylyltransferase-like Sfum_3648 PF13462 Thioredoxin Sfum_3648 PF06965 Na+/H+ antiporter 1 Sfum_3649 PF01842 ACT domain Sfum_3649 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Sfum_3649 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Sfum_3651 PF00288 GHMP kinases N terminal domain Sfum_3651 PF08544 GHMP kinases C terminal Sfum_3652 PF14572 Phosphoribosyl synthetase-associated domain Sfum_3652 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase Sfum_3653 PF14693 Ribosomal protein TL5, C-terminal domain Sfum_3653 PF01386 Ribosomal L25p family Sfum_3654 PF01195 Peptidyl-tRNA hydrolase Sfum_3655 PF02559 CarD-like/TRCF domain Sfum_3657 PF01479 S4 domain Sfum_3657 PF00849 RNA pseudouridylate synthase Sfum_3658 PF00263 Bacterial type II and III secretion system protein Sfum_3658 PF03958 Bacterial type II/III secretion system short domain Sfum_3664 PF07963 Prokaryotic N-terminal methylation motif Sfum_3664 PF08334 Type II secretion system (T2SS), protein G Sfum_3665 PF00482 Type II secretion system (T2SS), protein F Sfum_3666 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain Sfum_3666 PF00437 Type II/IV secretion system protein Sfum_3668 PF17200 Single Cache domain 2 Sfum_3668 PF07730 Histidine kinase Sfum_3671 PF00365 Phosphofructokinase Sfum_3674 PF00486 Transcriptional regulatory protein, C terminal Sfum_3674 PF00072 Response regulator receiver domain Sfum_3678 PF02321 Outer membrane efflux protein Sfum_3679 PF00873 AcrB/AcrD/AcrF family Sfum_3680 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Sfum_3680 PF00529 HlyD membrane-fusion protein of T1SS Sfum_3686 PF00766 Electron transfer flavoprotein FAD-binding domain Sfum_3686 PF01012 Electron transfer flavoprotein domain Sfum_3687 PF01012 Electron transfer flavoprotein domain Sfum_3688 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Sfum_3688 PF02770 Acyl-CoA dehydrogenase, middle domain Sfum_3688 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Sfum_3689 PF08361 MAATS-type transcriptional repressor, C-terminal region Sfum_3689 PF00440 Bacterial regulatory proteins, tetR family Sfum_3692 PF00977 Histidine biosynthesis protein Sfum_3696 PF00005 ABC transporter Sfum_3698 PF00528 Binding-protein-dependent transport system inner membrane component Sfum_3699 PF07715 TonB-dependent Receptor Plug Domain Sfum_3699 PF00593 TonB dependent receptor Sfum_3699 PF07660 Secretin and TonB N terminus short domain Sfum_3704 PF00005 ABC transporter Sfum_3708 PF01063 Amino-transferase class IV Sfum_3709 PF04715 Anthranilate synthase component I, N terminal region Sfum_3709 PF00425 chorismate binding enzyme Sfum_3710 PF00117 Glutamine amidotransferase class-I Sfum_3711 PF13649 Methyltransferase domain Sfum_3712 PF00155 Aminotransferase class I and II Sfum_3714 PF00109 Beta-ketoacyl synthase, N-terminal domain Sfum_3714 PF02801 Beta-ketoacyl synthase, C-terminal domain Sfum_3716 PF00550 Phosphopantetheine attachment site Sfum_3718 PF07977 FabA-like domain Sfum_3719 PF00202 Aminotransferase class-III Sfum_3720 PF02237 Biotin protein ligase C terminal domain Sfum_3720 PF03099 Biotin/lipoate A/B protein ligase family Sfum_3720 PF08279 HTH domain Sfum_3723 PF16868 NMT1-like family Sfum_3724 PF00793 DAHP synthetase I family Sfum_3724 PF18152 DAHP synthase ferredoxin-like domain Sfum_3727 PF05872 Bacterial protein of unknown function (DUF853) Sfum_3728 PF07690 Major Facilitator Superfamily Sfum_3731 PF04343 Protein of unknown function, DUF488 Sfum_3732 PF03033 Glycosyltransferase family 28 N-terminal domain Sfum_3732 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase Sfum_3737 PF02954 Bacterial regulatory protein, Fis family Sfum_3737 PF00158 Sigma-54 interaction domain Sfum_3737 PF00072 Response regulator receiver domain Sfum_3738 PF00072 Response regulator receiver domain Sfum_3740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_3740 PF08448 PAS fold Sfum_3740 PF13188 PAS domain Sfum_3740 PF00072 Response regulator receiver domain Sfum_3740 PF00512 His Kinase A (phospho-acceptor) domain Sfum_3741 PF00072 Response regulator receiver domain Sfum_3741 PF13188 PAS domain Sfum_3741 PF08448 PAS fold Sfum_3741 PF00512 His Kinase A (phospho-acceptor) domain Sfum_3741 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_3742 PF01336 OB-fold nucleic acid binding domain Sfum_3742 PF00152 tRNA synthetases class II (D, K and N) Sfum_3743 PF02687 FtsX-like permease family Sfum_3743 PF12704 MacB-like periplasmic core domain Sfum_3744 PF00005 ABC transporter Sfum_3745 PF07244 Surface antigen variable number repeat Sfum_3745 PF01103 Surface antigen Sfum_3747 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD Sfum_3747 PF00132 Bacterial transferase hexapeptide (six repeats) Sfum_3748 PF07977 FabA-like domain Sfum_3749 PF00132 Bacterial transferase hexapeptide (six repeats) Sfum_3749 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 Sfum_3750 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Sfum_3750 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Sfum_3751 PF02684 Lipid-A-disaccharide synthetase Sfum_3752 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) Sfum_3762 PF00005 ABC transporter Sfum_3765 PF00158 Sigma-54 interaction domain Sfum_3765 PF00072 Response regulator receiver domain Sfum_3765 PF02954 Bacterial regulatory protein, Fis family Sfum_3766 PF18152 DAHP synthase ferredoxin-like domain Sfum_3766 PF00793 DAHP synthetase I family Sfum_3767 PF01817 Chorismate mutase type II Sfum_3767 PF02153 Prephenate dehydrogenase Sfum_3769 PF07516 SecA Wing and Scaffold domain Sfum_3769 PF02810 SEC-C motif Sfum_3769 PF07517 SecA DEAD-like domain Sfum_3769 PF01043 SecA preprotein cross-linking domain Sfum_3773 PF00403 Heavy-metal-associated domain Sfum_3776 PF00239 Resolvase, N terminal domain Sfum_3776 PF02796 Helix-turn-helix domain of resolvase Sfum_3779 PF00717 Peptidase S24-like Sfum_3779 PF01726 LexA DNA binding domain Sfum_3789 PF13538 UvrD-like helicase C-terminal domain Sfum_3789 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain Sfum_3789 PF14490 Helix-hairpin-helix containing domain Sfum_3790 PF08275 DNA primase catalytic core, N-terminal domain Sfum_3790 PF01807 CHC2 zinc finger Sfum_3790 PF08278 DNA primase DnaG DnaB-binding Sfum_3790 PF13662 Toprim domain Sfum_3790 PF10410 DnaB-helicase binding domain of primase Sfum_3796 PF00589 Phage integrase family Sfum_3796 PF02899 Phage integrase, N-terminal SAM-like domain Sfum_3823 PF08291 Peptidase M15 Sfum_3823 PF01471 Putative peptidoglycan binding domain Sfum_3845 PF00145 C-5 cytosine-specific DNA methylase Sfum_3846 PF18339 RapA N-terminal Tudor like domain 1 Sfum_3846 PF00271 Helicase conserved C-terminal domain Sfum_3846 PF12137 RNA polymerase recycling family C-terminal Sfum_3846 PF00176 SNF2 family N-terminal domain Sfum_3846 PF18337 RapA N-terminal Tudor like domain Sfum_3849 PF03793 PASTA domain Sfum_3849 PF00069 Protein kinase domain Sfum_3854 PF03852 DNA mismatch endonuclease Vsr Sfum_3863 PF13784 Fic/DOC family N-terminal Sfum_3863 PF02661 Fic/DOC family Sfum_3870 PF00398 Ribosomal RNA adenine dimethylase Sfum_3872 PF10141 Single-strand DNA-specific exonuclease, C terminal domain Sfum_3872 PF17768 RecJ OB domain Sfum_3872 PF02272 DHHA1 domain Sfum_3872 PF01368 DHH family Sfum_3874 PF07992 Pyridine nucleotide-disulphide oxidoreductase Sfum_3877 PF08281 Sigma-70, region 4 Sfum_3877 PF04542 Sigma-70 region 2 Sfum_3887 PF08281 Sigma-70, region 4 Sfum_3887 PF04542 Sigma-70 region 2 Sfum_3891 PF01880 Desulfoferrodoxin Sfum_3891 PF06397 Desulfoferrodoxin, N-terminal domain Sfum_3894 PF00156 Phosphoribosyl transferase domain Sfum_3896 PF00180 Isocitrate/isopropylmalate dehydrogenase Sfum_3898 PF00155 Aminotransferase class I and II Sfum_3899 PF02913 FAD linked oxidases, C-terminal domain Sfum_3899 PF01565 FAD binding domain Sfum_3900 PF00528 Binding-protein-dependent transport system inner membrane component Sfum_3901 PF00005 ABC transporter Sfum_3902 PF00528 Binding-protein-dependent transport system inner membrane component Sfum_3903 PF00497 Bacterial extracellular solute-binding proteins, family 3 Sfum_3904 PF01042 Endoribonuclease L-PSP Sfum_3906 PF00534 Glycosyl transferases group 1 Sfum_3907 PF13439 Glycosyltransferase Family 4 Sfum_3907 PF00534 Glycosyl transferases group 1 Sfum_3911 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Sfum_3911 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Sfum_3911 PF02142 MGS-like domain Sfum_3912 PF03306 Alpha-acetolactate decarboxylase Sfum_3914 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Sfum_3914 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Sfum_3915 PF13660 Domain of unknown function (DUF4147) Sfum_3915 PF05161 MOFRL family Sfum_3921 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Sfum_3922 PF00873 AcrB/AcrD/AcrF family Sfum_3923 PF02321 Outer membrane efflux protein Sfum_3927 PF01494 FAD binding domain Sfum_3928 PF01494 FAD binding domain Sfum_3929 PF00766 Electron transfer flavoprotein FAD-binding domain Sfum_3929 PF01012 Electron transfer flavoprotein domain Sfum_3930 PF01012 Electron transfer flavoprotein domain Sfum_3931 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Sfum_3931 PF02770 Acyl-CoA dehydrogenase, middle domain Sfum_3931 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Sfum_3932 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal Sfum_3932 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal Sfum_3933 PF01144 Coenzyme A transferase Sfum_3934 PF00158 Sigma-54 interaction domain Sfum_3934 PF02954 Bacterial regulatory protein, Fis family Sfum_3934 PF00989 PAS fold Sfum_3938 PF00999 Sodium/hydrogen exchanger family Sfum_3938 PF02254 TrkA-N domain Sfum_3945 PF00528 Binding-protein-dependent transport system inner membrane component Sfum_3947 PF00005 ABC transporter Sfum_3950 PF00497 Bacterial extracellular solute-binding proteins, family 3 Sfum_3954 PF00374 Nickel-dependent hydrogenase Sfum_3955 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Sfum_3965 PF00483 Nucleotidyl transferase Sfum_3980 PF17820 PDZ domain Sfum_3980 PF13180 PDZ domain Sfum_3988 PF00005 ABC transporter Sfum_3988 PF00664 ABC transporter transmembrane region Sfum_3991 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sfum_3991 PF00989 PAS fold Sfum_3991 PF17203 Single cache domain 3 Sfum_3991 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain Sfum_3992 PF00072 Response regulator receiver domain Sfum_3992 PF12431 Transcriptional regulator Sfum_3993 PF03605 Anaerobic c4-dicarboxylate membrane transporter Sfum_4003 PF00924 Mechanosensitive ion channel Sfum_4004 PF00475 Imidazoleglycerol-phosphate dehydratase Sfum_4009 PF13186 Iron-sulfur cluster-binding domain Sfum_4009 PF04055 Radical SAM superfamily Sfum_4011 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Sfum_4012 PF02492 CobW/HypB/UreG, nucleotide-binding domain Sfum_4013 PF07503 HypF finger Sfum_4013 PF01300 Telomere recombination Sfum_4013 PF17788 HypF Kae1-like domain Sfum_4013 PF00708 Acylphosphatase Sfum_4014 PF01924 Hydrogenase formation hypA family Sfum_4015 PF02769 AIR synthase related protein, C-terminal domain Sfum_4015 PF00586 AIR synthase related protein, N-terminal domain Sfum_4017 PF07690 Major Facilitator Superfamily Sfum_4018 PF12544 Lysine-2,3-aminomutase Sfum_4018 PF04055 Radical SAM superfamily Sfum_4019 PF00005 ABC transporter Sfum_4019 PF12848 ABC transporter Sfum_4023 PF01926 50S ribosome-binding GTPase Sfum_4023 PF06071 Protein of unknown function (DUF933) Sfum_4025 PF04324 BFD-like [2Fe-2S] binding domain Sfum_4025 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Sfum_4025 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Sfum_4025 PF18267 Rubredoxin NAD+ reductase C-terminal domain Sfum_4025 PF07992 Pyridine nucleotide-disulphide oxidoreductase Sfum_4027 PF07228 Stage II sporulation protein E (SpoIIE) Sfum_4027 PF00672 HAMP domain Sfum_4031 PF00664 ABC transporter transmembrane region Sfum_4031 PF00005 ABC transporter Sfum_4033 PF01740 STAS domain Sfum_4037 PF17805 AsnC-like ligand binding domain Sfum_4039 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Sfum_4042 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Sfum_4042 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Sfum_4043 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Sfum_4043 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Sfum_4044 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Sfum_4044 PF07685 CobB/CobQ-like glutamine amidotransferase domain Sfum_4045 PF04358 DsrC like protein Sfum_4046 PF13237 4Fe-4S dicluster domain Sfum_4049 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein Sfum_4050 PF01595 Cyclin M transmembrane N-terminal domain Sfum_4050 PF03471 Transporter associated domain Sfum_4050 PF00571 CBS domain Sfum_4051 PF09190 DALR domain Sfum_4051 PF01406 tRNA synthetases class I (C) catalytic domain Sfum_4052 PF01926 50S ribosome-binding GTPase Sfum_4053 PF00155 Aminotransferase class I and II Sfum_4056 PF01502 Phosphoribosyl-AMP cyclohydrolase Sfum_4057 PF04055 Radical SAM superfamily Sfum_4058 PF00850 Histone deacetylase domain Sfum_4059 PF01968 Hydantoinase/oxoprolinase Sfum_4059 PF05378 Hydantoinase/oxoprolinase N-terminal region Sfum_4061 PF07943 Penicillin-binding protein 5, C-terminal domain Sfum_4061 PF00768 D-alanyl-D-alanine carboxypeptidase Sfum_4066 PF00535 Glycosyl transferase family 2 Sfum_4070 PF02653 Branched-chain amino acid transport system / permease component Sfum_4071 PF11862 Domain of unknown function (DUF3382) Sfum_4071 PF02653 Branched-chain amino acid transport system / permease component Sfum_4072 PF00005 ABC transporter Sfum_4072 PF12399 Branched-chain amino acid ATP-binding cassette transporter Sfum_4073 PF00005 ABC transporter Sfum_4074 PF00501 AMP-binding enzyme Sfum_4074 PF14535 AMP-binding enzyme C-terminal domain Sfum_4077 PF03749 Sugar fermentation stimulation protein RE domain Sfum_4077 PF17746 SfsA N-terminal OB domain Sfum_4080 PF02594 Uncharacterised ACR, YggU family COG1872 Sfum_4085 PF00211 Adenylate and Guanylate cyclase catalytic domain Sfum_4089 PF12706 Beta-lactamase superfamily domain Sfum_4095 PF02910 Fumarate reductase flavoprotein C-term Sfum_4095 PF00890 FAD binding domain Sfum_4096 PF00085 Thioredoxin Sfum_4099 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Sfum_4100 PF02649 Type I GTP cyclohydrolase folE2 Sfum_4102 PF01820 D-ala D-ala ligase N-terminus Sfum_4102 PF07478 D-ala D-ala ligase C-terminus