Sfum_0001 SM00760 Bacterial dnaA protein helix-turn-helix domain Sfum_0002 SM00411 bacterial (prokaryotic) histone like domain Sfum_0005 SM00028 Tetratricopeptide repeats Sfum_0006 SM00116 Domain in cystathionine beta-synthase and other proteins. Sfum_0008 SM00851 MGS-like domain Sfum_0008 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Sfum_0009 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain Sfum_0029 SM00382 ATPases associated with a variety of cellular activities Sfum_0030 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Sfum_0030 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Sfum_0032 SM00852 Probable molybdopterin binding domain Sfum_0035 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Sfum_0043 SM00382 ATPases associated with a variety of cellular activities Sfum_0043 SM01086 C-terminal, D2-small domain, of ClpB protein Sfum_0052 SM00746 metallochaperone-like domain Sfum_0056 SM01130 Sfum_0056 Sfum_0065 SM00382 ATPases associated with a variety of cellular activities Sfum_0065 SM01086 C-terminal, D2-small domain, of ClpB protein Sfum_0068 SM00838 Elongation factor G C-terminus Sfum_0068 SM00889 Elongation factor G, domain IV Sfum_0070 SM00852 Probable molybdopterin binding domain Sfum_0074 SM00028 Tetratricopeptide repeats Sfum_0077 SM00841 Elongation factor P, C-terminal Sfum_0077 SM01185 Sfum_0077 Sfum_0078 SM01192 Sfum_0078 Sfum_0078 SM01193 Sfum_0078 Sfum_0084 SM00360 RNA recognition motif Sfum_0086 SM00382 ATPases associated with a variety of cellular activities Sfum_0093 SM00450 Rhodanese Homology Domain Sfum_0098 SM00382 ATPases associated with a variety of cellular activities Sfum_0098 SM00464 Found in ATP-dependent protease La (LON) Sfum_0099 SM00382 ATPases associated with a variety of cellular activities Sfum_0099 SM00994 ClpX C4-type zinc finger Sfum_0099 SM01086 C-terminal, D2-small domain, of ClpB protein Sfum_0103 SM00729 Elongator protein 3, MiaB family, Radical SAM Sfum_0104 SM01228 Sfum_0104 Sfum_0106 SM00893 Electron transfer flavoprotein domain Sfum_0107 SM00893 Electron transfer flavoprotein domain Sfum_0117 SM00382 ATPases associated with a variety of cellular activities Sfum_0119 SM00387 Histidine kinase-like ATPases Sfum_0119 SM00388 His Kinase A (phosphoacceptor) domain Sfum_0120 SM00883 Chaperonin 10 Kd subunit Sfum_0125 SM00028 Tetratricopeptide repeats Sfum_0137 SM00382 ATPases associated with a variety of cellular activities Sfum_0157 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Sfum_0166 SM00729 Elongator protein 3, MiaB family, Radical SAM Sfum_0168 SM00930 Sfum_0168 Sfum_0171 SM00116 Domain in cystathionine beta-synthase and other proteins. Sfum_0175 SM00054 EF-hand, calcium binding motif Sfum_0184 SM00244 prohibitin homologues Sfum_0185 SM00244 prohibitin homologues Sfum_0187 SM00448 cheY-homologous receiver domain Sfum_0190 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Sfum_0213 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain Sfum_0213 SM00437 Bacterial DNA topoisomerase I DNA-binding domain Sfum_0213 SM00493 Sfum_0213 Sfum_0219 SM00028 Tetratricopeptide repeats Sfum_0222 SM00645 Papain family cysteine protease Sfum_0231 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Sfum_0231 SM00091 PAS domain Sfum_0231 SM00387 Histidine kinase-like ATPases Sfum_0231 SM00388 His Kinase A (phosphoacceptor) domain Sfum_0231 SM00448 cheY-homologous receiver domain Sfum_0238 SM00855 Phosphoglycerate mutase family Sfum_0242 SM00155 Phospholipase D. Active site motifs. Sfum_0252 SM00382 ATPases associated with a variety of cellular activities Sfum_0261 SM00271 DnaJ molecular chaperone homology domain Sfum_0263 SM00382 ATPases associated with a variety of cellular activities Sfum_0263 SM01086 C-terminal, D2-small domain, of ClpB protein Sfum_0264 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Sfum_0267 SM00966 SpoVT / AbrB like domain Sfum_0269 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain Sfum_0281 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Sfum_0281 SM00091 PAS domain Sfum_0281 SM00387 Histidine kinase-like ATPases Sfum_0283 SM00382 ATPases associated with a variety of cellular activities Sfum_0294 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Sfum_0294 SM00091 PAS domain Sfum_0294 SM00388 His Kinase A (phosphoacceptor) domain Sfum_0303 SM00091 PAS domain Sfum_0303 SM00382 ATPases associated with a variety of cellular activities Sfum_0306 SM00917 LeuA allosteric (dimerisation) domain Sfum_0309 SM00116 Domain in cystathionine beta-synthase and other proteins. Sfum_0310 SM00382 ATPases associated with a variety of cellular activities Sfum_0311 SM00382 ATPases associated with a variety of cellular activities Sfum_0317 SM00960 Roadblock/LC7 domain Sfum_0321 SM00220 Serine/Threonine protein kinases, catalytic domain Sfum_0326 SM00671 Sel1-like repeats. Sfum_0332 SM01049 Sfum_0332 Sfum_0342 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Sfum_0342 SM00091 PAS domain Sfum_0342 SM00382 ATPases associated with a variety of cellular activities Sfum_0353 SM00478 endonuclease III Sfum_0354 SM00729 Elongator protein 3, MiaB family, Radical SAM Sfum_0359 SM00642 Alpha-amylase domain Sfum_0360 SM00422 helix_turn_helix, mercury resistance Sfum_0361 SM00729 Elongator protein 3, MiaB family, Radical SAM Sfum_0364 SM00487 DEAD-like helicases superfamily Sfum_0365 SM00925 MltA specific insert domain Sfum_0366 SM00996 S-adenosyl-L-homocysteine hydrolase Sfum_0366 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Sfum_0381 SM00014 Acid phosphatase homologues Sfum_0383 SM00382 ATPases associated with a variety of cellular activities Sfum_0384 SM00382 ATPases associated with a variety of cellular activities Sfum_0401 SM00382 ATPases associated with a variety of cellular activities Sfum_0406 SM00450 Rhodanese Homology Domain Sfum_0409 SM00966 SpoVT / AbrB like domain Sfum_0411 SM00487 DEAD-like helicases superfamily Sfum_0411 SM00490 helicase superfamily c-terminal domain Sfum_0413 SM00028 Tetratricopeptide repeats Sfum_0414 SM00341 Helicase and RNase D C-terminal Sfum_0414 SM00474 3'-5' exonuclease Sfum_0415 SM00463 Small MutS-related domain Sfum_0419 SM00729 Elongator protein 3, MiaB family, Radical SAM Sfum_0420 SM00100 Cyclic nucleotide-monophosphate binding domain Sfum_0424 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Sfum_0429 SM00873 B3/4 domain Sfum_0429 SM00874 tRNA synthetase B5 domain Sfum_0429 SM00896 Ferredoxin-fold anticodon binding domain Sfum_0433 SM01211 Sfum_0433 Sfum_0443 SM00887 Ethylbenzene dehydrogenase Sfum_0444 SM00887 Ethylbenzene dehydrogenase Sfum_0449 SM00861 Transketolase, pyrimidine binding domain Sfum_0456 SM00382 ATPases associated with a variety of cellular activities Sfum_0463 SM00959 Rho termination factor, N-terminal domain Sfum_0464 SM00244 prohibitin homologues Sfum_0466 SM00986 Uracil DNA glycosylase superfamily Sfum_0466 SM00987 UreE urease accessory protein, C-terminal domain Sfum_0469 SM00849 Metallo-beta-lactamase superfamily Sfum_0472 SM00382 ATPases associated with a variety of cellular activities Sfum_0478 SM00840 Sfum_0478 Sfum_0486 SM00257 Lysin motif Sfum_0490 SM00530 Helix-turn-helix XRE-family like proteins Sfum_0495 SM00382 ATPases associated with a variety of cellular activities Sfum_0497 SM00382 ATPases associated with a variety of cellular activities Sfum_0498 SM00327 von Willebrand factor (vWF) type A domain Sfum_0500 SM00562 Sfum_0500 Sfum_0511 SM00450 Rhodanese Homology Domain Sfum_0513 SM00450 Rhodanese Homology Domain Sfum_0513 SM00849 Metallo-beta-lactamase superfamily Sfum_0537 SM00842 Cell division protein FtsA Sfum_0540 SM00965 Secretin and TonB N terminus short domain Sfum_0551 SM00382 ATPases associated with a variety of cellular activities Sfum_0556 SM00115 Caspase, interleukin-1 beta converting enzyme (ICE) homologues Sfum_0558 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain Sfum_0558 SM01080 Sfum_0558 Sfum_0559 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain Sfum_0559 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Sfum_0559 SM00240 Forkhead associated domain Sfum_0561 SM00836 DALR anticodon binding domain Sfum_0561 SM01016 Arginyl tRNA synthetase N terminal dom Sfum_0562 SM01005 Alanine racemase, C-terminal domain Sfum_0567 SM00357 Cold shock protein domain Sfum_0570 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Sfum_0570 SM00382 ATPases associated with a variety of cellular activities Sfum_0573 SM00938 Nitrogen regulatory protein P-II Sfum_0574 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Sfum_0576 SM01230 Sfum_0576 Sfum_0581 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Sfum_0581 SM00387 Histidine kinase-like ATPases Sfum_0581 SM00388 His Kinase A (phosphoacceptor) domain Sfum_0582 SM00421 helix_turn_helix, Lux Regulon Sfum_0582 SM00448 cheY-homologous receiver domain Sfum_0583 SM00448 cheY-homologous receiver domain Sfum_0594 SM00834 Putative regulatory protein Sfum_0610 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Sfum_0615 SM00852 Probable molybdopterin binding domain Sfum_0617 SM00387 Histidine kinase-like ATPases Sfum_0617 SM00388 His Kinase A (phosphoacceptor) domain Sfum_0618 SM00448 cheY-homologous receiver domain Sfum_0619 SM00387 Histidine kinase-like ATPases Sfum_0619 SM00388 His Kinase A (phosphoacceptor) domain Sfum_0620 SM00448 cheY-homologous receiver domain Sfum_0621 SM00382 ATPases associated with a variety of cellular activities Sfum_0621 SM00448 cheY-homologous receiver domain Sfum_0622 SM00091 PAS domain Sfum_0622 SM00387 Histidine kinase-like ATPases Sfum_0622 SM00388 His Kinase A (phosphoacceptor) domain Sfum_0623 SM00448 cheY-homologous receiver domain Sfum_0631 SM00387 Histidine kinase-like ATPases Sfum_0631 SM00388 His Kinase A (phosphoacceptor) domain Sfum_0632 SM00448 cheY-homologous receiver domain Sfum_0633 SM00448 cheY-homologous receiver domain Sfum_0636 SM00448 cheY-homologous receiver domain Sfum_0642 SM00387 Histidine kinase-like ATPases Sfum_0642 SM00388 His Kinase A (phosphoacceptor) domain Sfum_0643 SM00382 ATPases associated with a variety of cellular activities Sfum_0643 SM00448 cheY-homologous receiver domain Sfum_0647 SM00448 cheY-homologous receiver domain Sfum_0648 SM00448 cheY-homologous receiver domain Sfum_0651 SM00387 Histidine kinase-like ATPases Sfum_0651 SM00388 His Kinase A (phosphoacceptor) domain Sfum_0652 SM00448 cheY-homologous receiver domain Sfum_0654 SM00448 cheY-homologous receiver domain Sfum_0656 SM00448 cheY-homologous receiver domain Sfum_0657 SM00448 cheY-homologous receiver domain Sfum_0659 SM00518 AP endonuclease family 2 Sfum_0660 SM00998 Adenylosuccinate lyase C-terminus Sfum_0667 SM00382 ATPases associated with a variety of cellular activities Sfum_0668 SM00387 Histidine kinase-like ATPases Sfum_0668 SM00388 His Kinase A (phosphoacceptor) domain Sfum_0676 SM00878 Biotin carboxylase C-terminal domain Sfum_0679 SM00116 Domain in cystathionine beta-synthase and other proteins. Sfum_0683 SM00363 S4 RNA-binding domain Sfum_0684 SM00028 Tetratricopeptide repeats Sfum_0685 SM00220 Serine/Threonine protein kinases, catalytic domain Sfum_0688 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Sfum_0701 SM00382 ATPases associated with a variety of cellular activities Sfum_0702 SM00382 ATPases associated with a variety of cellular activities Sfum_0706 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Sfum_0706 SM00387 Histidine kinase-like ATPases Sfum_0706 SM00388 His Kinase A (phosphoacceptor) domain Sfum_0707 SM00448 cheY-homologous receiver domain Sfum_0707 SM00862 Transcriptional regulatory protein, C terminal Sfum_0708 SM00881 CoA binding domain Sfum_0715 SM00382 ATPases associated with a variety of cellular activities Sfum_0715 SM00464 Found in ATP-dependent protease La (LON) Sfum_0717 SM00729 Elongator protein 3, MiaB family, Radical SAM Sfum_0719 SM00267 diguanylate cyclase Sfum_0719 SM00448 cheY-homologous receiver domain Sfum_0722 SM00116 Domain in cystathionine beta-synthase and other proteins. Sfum_0722 SM01091 Transporter associated domain Sfum_0724 SM00937 Sfum_0724 Sfum_0726 SM00938 Nitrogen regulatory protein P-II Sfum_0728 SM00955 Sfum_0728 Sfum_0729 SM00646 Sfum_0729 Sfum_0730 SM00533 DNA-binding domain of DNA mismatch repair MUTS family Sfum_0730 SM00534 ATPase domain of DNA mismatch repair MUTS family Sfum_0731 SM00382 ATPases associated with a variety of cellular activities Sfum_0733 SM00357 Cold shock protein domain Sfum_0735 SM00091 PAS domain Sfum_0735 SM00387 Histidine kinase-like ATPases Sfum_0750 SM00257 Lysin motif Sfum_0757 SM00028 Tetratricopeptide repeats Sfum_0766 SM00382 ATPases associated with a variety of cellular activities Sfum_0798 SM00463 Small MutS-related domain Sfum_0801 SM00487 DEAD-like helicases superfamily Sfum_0801 SM00490 helicase superfamily c-terminal domain Sfum_0807 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins Sfum_0809 SM00882 Coenzyme A transferase Sfum_0810 SM00882 Coenzyme A transferase Sfum_0811 SM00882 Coenzyme A transferase Sfum_0814 SM00062 Bacterial periplasmic substrate-binding proteins Sfum_0817 SM00382 ATPases associated with a variety of cellular activities Sfum_0821 SM00448 cheY-homologous receiver domain Sfum_0826 SM00387 Histidine kinase-like ATPases Sfum_0826 SM00388 His Kinase A (phosphoacceptor) domain Sfum_0827 SM00382 ATPases associated with a variety of cellular activities Sfum_0827 SM00448 cheY-homologous receiver domain Sfum_0828 SM00091 PAS domain Sfum_0828 SM00387 Histidine kinase-like ATPases Sfum_0828 SM00388 His Kinase A (phosphoacceptor) domain Sfum_0828 SM00448 cheY-homologous receiver domain Sfum_0829 SM00829 Enoylreductase Sfum_0837 SM00382 ATPases associated with a variety of cellular activities Sfum_0838 SM00382 ATPases associated with a variety of cellular activities Sfum_0841 SM00729 Elongator protein 3, MiaB family, Radical SAM Sfum_0841 SM00876 Biotin and Thiamin Synthesis associated domain Sfum_0842 SM00876 Biotin and Thiamin Synthesis associated domain Sfum_0844 SM00902 Iron hydrogenase small subunit Sfum_0844 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Sfum_0845 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Sfum_0847 SM00902 Iron hydrogenase small subunit Sfum_0853 SM00382 ATPases associated with a variety of cellular activities Sfum_0853 SM00448 cheY-homologous receiver domain Sfum_0854 SM00387 Histidine kinase-like ATPases Sfum_0854 SM00388 His Kinase A (phosphoacceptor) domain Sfum_0855 SM00382 ATPases associated with a variety of cellular activities Sfum_0856 SM00382 ATPases associated with a variety of cellular activities Sfum_0857 SM00382 ATPases associated with a variety of cellular activities Sfum_0869 SM00530 Helix-turn-helix XRE-family like proteins Sfum_0871 SM00563 Phosphate acyltransferases Sfum_0872 SM00382 ATPases associated with a variety of cellular activities Sfum_0872 SM00393 Putative single-stranded nucleic acids-binding domain Sfum_0875 SM00729 Elongator protein 3, MiaB family, Radical SAM Sfum_0876 SM00358 Double-stranded RNA binding motif Sfum_0876 SM00535 Ribonuclease III family Sfum_0883 SM00382 ATPases associated with a variety of cellular activities Sfum_0884 SM00382 ATPases associated with a variety of cellular activities Sfum_0903 SM00645 Papain family cysteine protease Sfum_0907 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Sfum_0907 SM00091 PAS domain Sfum_0909 SM00729 Elongator protein 3, MiaB family, Radical SAM Sfum_0929 SM00481 DNA polymerase alpha chain like domain Sfum_0935 SM00116 Domain in cystathionine beta-synthase and other proteins. Sfum_0937 SM00563 Phosphate acyltransferases Sfum_0942 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Sfum_0942 SM00091 PAS domain Sfum_0942 SM00387 Histidine kinase-like ATPases Sfum_0942 SM00388 His Kinase A (phosphoacceptor) domain Sfum_0943 SM00421 helix_turn_helix, Lux Regulon Sfum_0943 SM00448 cheY-homologous receiver domain Sfum_0944 SM00448 cheY-homologous receiver domain Sfum_0947 SM00421 helix_turn_helix, Lux Regulon Sfum_0947 SM00448 cheY-homologous receiver domain Sfum_0948 SM00382 ATPases associated with a variety of cellular activities Sfum_0948 SM00448 cheY-homologous receiver domain Sfum_0977 SM00382 ATPases associated with a variety of cellular activities Sfum_0983 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Sfum_0983 SM00954 Region found in RelA / SpoT proteins Sfum_0984 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Sfum_0985 SM00507 HNH nucleases Sfum_0987 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Sfum_0993 SM00382 ATPases associated with a variety of cellular activities Sfum_0994 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Sfum_0998 SM00506 Appr-1"-p processing enzyme Sfum_1003 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Sfum_1004 SM00382 ATPases associated with a variety of cellular activities Sfum_1007 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Sfum_1007 SM00091 PAS domain Sfum_1007 SM00387 Histidine kinase-like ATPases Sfum_1007 SM00388 His Kinase A (phosphoacceptor) domain Sfum_1007 SM00448 cheY-homologous receiver domain Sfum_1010 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Sfum_1010 SM00382 ATPases associated with a variety of cellular activities Sfum_1011 SM00729 Elongator protein 3, MiaB family, Radical SAM Sfum_1017 SM00938 Nitrogen regulatory protein P-II Sfum_1018 SM00938 Nitrogen regulatory protein P-II Sfum_1020 SM00052 Putative diguanylate phosphodiesterase Sfum_1020 SM00267 diguanylate cyclase Sfum_1020 SM00448 cheY-homologous receiver domain Sfum_1023 SM00603 Sfum_1023 Sfum_1031 SM00382 ATPases associated with a variety of cellular activities Sfum_1037 SM00028 Tetratricopeptide repeats Sfum_1038 SM00834 Putative regulatory protein Sfum_1040 SM00986 Uracil DNA glycosylase superfamily Sfum_1040 SM00987 UreE urease accessory protein, C-terminal domain Sfum_1044 SM00838 Elongation factor G C-terminus Sfum_1044 SM00889 Elongation factor G, domain IV Sfum_1062 SM00478 endonuclease III Sfum_1065 SM00530 Helix-turn-helix XRE-family like proteins Sfum_1080 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain Sfum_1083 SM00382 ATPases associated with a variety of cellular activities Sfum_1089 SM00255 Toll - interleukin 1 - resistance Sfum_1091 SM00320 WD40 repeats Sfum_1095 SM01359 Sfum_1095 Sfum_1095 SM01360 Sfum_1095 Sfum_1103 SM00382 ATPases associated with a variety of cellular activities Sfum_1119 SM00831 Cation transporter/ATPase, N-terminus Sfum_1120 SM00091 PAS domain Sfum_1120 SM00387 Histidine kinase-like ATPases Sfum_1132 SM00882 Coenzyme A transferase Sfum_1134 SM00882 Coenzyme A transferase Sfum_1136 SM00062 Bacterial periplasmic substrate-binding proteins Sfum_1138 SM00849 Metallo-beta-lactamase superfamily Sfum_1142 SM00347 helix_turn_helix multiple antibiotic resistance protein Sfum_1154 SM00530 Helix-turn-helix XRE-family like proteins Sfum_1159 SM01049 Sfum_1159 Sfum_1160 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Sfum_1160 SM00091 PAS domain Sfum_1160 SM00382 ATPases associated with a variety of cellular activities Sfum_1163 SM00882 Coenzyme A transferase Sfum_1164 SM00091 PAS domain Sfum_1164 SM00382 ATPases associated with a variety of cellular activities Sfum_1184 SM00028 Tetratricopeptide repeats Sfum_1192 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Sfum_1192 SM00091 PAS domain Sfum_1192 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Sfum_1192 SM00387 Histidine kinase-like ATPases Sfum_1192 SM00388 His Kinase A (phosphoacceptor) domain Sfum_1192 SM00448 cheY-homologous receiver domain Sfum_1195 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Sfum_1195 SM00091 PAS domain Sfum_1202 SM00957 SecA DEAD-like domain Sfum_1202 SM00958 SecA preprotein cross-linking domain Sfum_1208 SM01400 Sfum_1208 Sfum_1213 SM00400 zinc finger Sfum_1213 SM00493 Sfum_1213 Sfum_1221 SM00886 Stress responsive A/B Barrel Domain Sfum_1225 SM00481 DNA polymerase alpha chain like domain Sfum_1227 SM00316 Ribosomal protein S1-like RNA-binding domain Sfum_1227 SM00322 K homology RNA-binding domain Sfum_1233 SM01387 Sfum_1233 Sfum_1234 SM00316 Ribosomal protein S1-like RNA-binding domain Sfum_1234 SM00322 K homology RNA-binding domain Sfum_1236 SM00849 Metallo-beta-lactamase superfamily Sfum_1240 SM01323 Sfum_1240 Sfum_1252 SM01049 Sfum_1252 Sfum_1257 SM00465 GIY-YIG type nucleases (URI domain) Sfum_1265 SM00977 TilS substrate C-terminal domain Sfum_1266 SM00054 EF-hand, calcium binding motif Sfum_1271 SM00788 Adenylosuccinate synthetase Sfum_1273 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Sfum_1289 SM00881 CoA binding domain Sfum_1302 SM00861 Transketolase, pyrimidine binding domain Sfum_1304 SM00834 Putative regulatory protein Sfum_1305 SM00936 Penicillin-binding protein 5, C-terminal domain Sfum_1310 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Sfum_1317 SM00855 Phosphoglycerate mutase family Sfum_1318 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Sfum_1325 SM00327 von Willebrand factor (vWF) type A domain Sfum_1325 SM00609 Vault protein Inter-alpha-Trypsin domain Sfum_1336 SM00062 Bacterial periplasmic substrate-binding proteins Sfum_1337 SM00091 PAS domain Sfum_1337 SM00387 Histidine kinase-like ATPases Sfum_1337 SM00388 His Kinase A (phosphoacceptor) domain Sfum_1337 SM00448 cheY-homologous receiver domain Sfum_1353 SM00028 Tetratricopeptide repeats Sfum_1360 SM00729 Elongator protein 3, MiaB family, Radical SAM Sfum_1372 SM00893 Electron transfer flavoprotein domain Sfum_1373 SM00893 Electron transfer flavoprotein domain Sfum_1374 SM00822 Sfum_1374 Sfum_1375 SM00825 Beta-ketoacyl synthase Sfum_1390 SM00382 ATPases associated with a variety of cellular activities Sfum_1391 SM00382 ATPases associated with a variety of cellular activities Sfum_1396 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Sfum_1396 SM00091 PAS domain Sfum_1396 SM00387 Histidine kinase-like ATPases Sfum_1396 SM00388 His Kinase A (phosphoacceptor) domain Sfum_1396 SM00448 cheY-homologous receiver domain Sfum_1398 SM00450 Rhodanese Homology Domain Sfum_1400 SM00849 Metallo-beta-lactamase superfamily Sfum_1400 SM01027 Beta-Casp domain Sfum_1418 SM00861 Transketolase, pyrimidine binding domain Sfum_1425 SM00411 bacterial (prokaryotic) histone like domain Sfum_1428 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Sfum_1428 SM00292 breast cancer carboxy-terminal domain Sfum_1428 SM00532 Ligase N family Sfum_1430 SM00411 bacterial (prokaryotic) histone like domain Sfum_1434 SM00487 DEAD-like helicases superfamily Sfum_1434 SM00490 helicase superfamily c-terminal domain Sfum_1435 SM00729 Elongator protein 3, MiaB family, Radical SAM Sfum_1438 SM00487 DEAD-like helicases superfamily Sfum_1438 SM00490 helicase superfamily c-terminal domain Sfum_1439 SM00731 SprT homologues. Sfum_1441 SM00530 Helix-turn-helix XRE-family like proteins Sfum_1446 SM00448 cheY-homologous receiver domain Sfum_1447 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Sfum_1447 SM00091 PAS domain Sfum_1447 SM00387 Histidine kinase-like ATPases Sfum_1447 SM00388 His Kinase A (phosphoacceptor) domain Sfum_1449 SM00357 Cold shock protein domain Sfum_1450 SM00360 RNA recognition motif Sfum_1452 SM00487 DEAD-like helicases superfamily Sfum_1452 SM00490 helicase superfamily c-terminal domain Sfum_1464 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Sfum_1464 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Sfum_1464 SM00091 PAS domain Sfum_1464 SM00382 ATPases associated with a variety of cellular activities Sfum_1467 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Sfum_1468 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Sfum_1471 SM00642 Alpha-amylase domain Sfum_1477 SM00855 Phosphoglycerate mutase family Sfum_1479 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain Sfum_1483 SM00271 DnaJ molecular chaperone homology domain Sfum_1484 SM00671 Sel1-like repeats. Sfum_1487 SM00091 PAS domain Sfum_1487 SM00387 Histidine kinase-like ATPases Sfum_1487 SM00388 His Kinase A (phosphoacceptor) domain Sfum_1488 SM00382 ATPases associated with a variety of cellular activities Sfum_1488 SM00448 cheY-homologous receiver domain Sfum_1492 SM00858 Sfum_1492 Sfum_1501 SM00028 Tetratricopeptide repeats Sfum_1502 SM00091 PAS domain Sfum_1502 SM00387 Histidine kinase-like ATPases Sfum_1502 SM00388 His Kinase A (phosphoacceptor) domain Sfum_1502 SM00448 cheY-homologous receiver domain Sfum_1503 SM00257 Lysin motif Sfum_1503 SM00382 ATPases associated with a variety of cellular activities Sfum_1504 SM00382 ATPases associated with a variety of cellular activities Sfum_1513 SM00100 Cyclic nucleotide-monophosphate binding domain Sfum_1513 SM00450 Rhodanese Homology Domain Sfum_1516 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Sfum_1516 SM00267 diguanylate cyclase Sfum_1522 SM00345 helix_turn_helix gluconate operon transcriptional repressor Sfum_1522 SM00895 Sfum_1522 Sfum_1528 SM01049 Sfum_1528 Sfum_1539 SM00460 Transglutaminase/protease-like homologues Sfum_1544 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. Sfum_1544 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. Sfum_1545 SM00649 Ribosomal protein L11/L12 Sfum_1550 SM00663 RNA polymerase I subunit A N-terminus Sfum_1554 SM01403 Sfum_1554 Sfum_1558 SM01382 Sfum_1558 Sfum_1558 SM01383 Sfum_1558 Sfum_1561 SM00322 K homology RNA-binding domain Sfum_1565 SM01374 Sfum_1565 Sfum_1566 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. Sfum_1578 SM00316 Ribosomal protein S1-like RNA-binding domain Sfum_1581 SM00363 S4 RNA-binding domain Sfum_1581 SM01390 Sfum_1581 Sfum_1582 SM00662 RNA polymerases D Sfum_1585 SM00729 Elongator protein 3, MiaB family, Radical SAM Sfum_1596 SM00563 Phosphate acyltransferases Sfum_1597 SM00849 Metallo-beta-lactamase superfamily Sfum_1598 SM00382 ATPases associated with a variety of cellular activities Sfum_1598 SM00843 Sfum_1598 Sfum_1603 SM00881 CoA binding domain Sfum_1609 SM00316 Ribosomal protein S1-like RNA-binding domain Sfum_1610 SM00729 Elongator protein 3, MiaB family, Radical SAM Sfum_1612 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs Sfum_1612 SM00474 3'-5' exonuclease Sfum_1612 SM00475 5'-3' exonuclease Sfum_1612 SM00482 DNA polymerase A domain Sfum_1615 SM00382 ATPases associated with a variety of cellular activities Sfum_1616 SM00028 Tetratricopeptide repeats Sfum_1618 SM00028 Tetratricopeptide repeats Sfum_1628 SM00382 ATPases associated with a variety of cellular activities Sfum_1634 SM00840 Sfum_1634 Sfum_1643 SM00382 ATPases associated with a variety of cellular activities Sfum_1645 SM00448 cheY-homologous receiver domain Sfum_1647 SM00260 Two component signalling adaptor domain Sfum_1648 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sfum_1648 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Sfum_1649 SM00448 cheY-homologous receiver domain Sfum_1650 SM00073 Histidine Phosphotransfer domain Sfum_1650 SM00260 Two component signalling adaptor domain Sfum_1650 SM00387 Histidine kinase-like ATPases Sfum_1650 SM01231 Sfum_1650 Sfum_1651 SM00448 cheY-homologous receiver domain Sfum_1652 SM00448 cheY-homologous receiver domain Sfum_1653 SM00960 Roadblock/LC7 domain Sfum_1656 SM00849 Metallo-beta-lactamase superfamily Sfum_1661 SM01264 Sfum_1661 Sfum_1663 SM00448 cheY-homologous receiver domain Sfum_1664 SM00421 helix_turn_helix, Lux Regulon Sfum_1664 SM00448 cheY-homologous receiver domain Sfum_1667 SM00859 Semialdehyde dehydrogenase, NAD binding domain Sfum_1673 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Sfum_1677 SM00382 ATPases associated with a variety of cellular activities Sfum_1678 SM00382 ATPases associated with a variety of cellular activities Sfum_1694 SM00382 ATPases associated with a variety of cellular activities Sfum_1695 SM00382 ATPases associated with a variety of cellular activities Sfum_1698 SM00487 DEAD-like helicases superfamily Sfum_1698 SM00490 helicase superfamily c-terminal domain Sfum_1699 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. Sfum_1700 SM00852 Probable molybdopterin binding domain Sfum_1702 SM00881 CoA binding domain Sfum_1705 SM00845 GatB domain Sfum_1707 SM00382 ATPases associated with a variety of cellular activities Sfum_1710 SM00028 Tetratricopeptide repeats Sfum_1711 SM00357 Cold shock protein domain Sfum_1711 SM00382 ATPases associated with a variety of cellular activities Sfum_1711 SM00959 Rho termination factor, N-terminal domain Sfum_1713 SM00937 Sfum_1713 Sfum_1721 SM01060 Sfum_1721 Sfum_1728 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family Sfum_1730 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Sfum_1732 SM00849 Metallo-beta-lactamase superfamily Sfum_1744 SM00729 Elongator protein 3, MiaB family, Radical SAM Sfum_1748 SM00760 Bacterial dnaA protein helix-turn-helix domain Sfum_1748 SM01321 Sfum_1748 Sfum_1750 SM00382 ATPases associated with a variety of cellular activities Sfum_1755 SM00382 ATPases associated with a variety of cellular activities Sfum_1756 SM00271 DnaJ molecular chaperone homology domain Sfum_1758 SM01409 Sfum_1758 Sfum_1768 SM00028 Tetratricopeptide repeats Sfum_1785 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Sfum_1788 SM00978 Sfum_1788 Sfum_1796 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Sfum_1822 SM00876 Biotin and Thiamin Synthesis associated domain Sfum_1825 SM00729 Elongator protein 3, MiaB family, Radical SAM Sfum_1825 SM00876 Biotin and Thiamin Synthesis associated domain Sfum_1827 SM00382 ATPases associated with a variety of cellular activities Sfum_1831 SM00316 Ribosomal protein S1-like RNA-binding domain Sfum_1838 SM00316 Ribosomal protein S1-like RNA-binding domain Sfum_1838 SM00732 Likely ribonuclease with RNase H fold. Sfum_1841 SM00729 Elongator protein 3, MiaB family, Radical SAM Sfum_1841 SM00876 Biotin and Thiamin Synthesis associated domain Sfum_1844 SM00729 Elongator protein 3, MiaB family, Radical SAM Sfum_1844 SM00876 Biotin and Thiamin Synthesis associated domain Sfum_1847 SM00331 Sigma factor PP2C-like phosphatases Sfum_1848 SM00248 ankyrin repeats Sfum_1857 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Sfum_1860 SM00382 ATPases associated with a variety of cellular activities Sfum_1861 SM00448 cheY-homologous receiver domain Sfum_1862 SM00091 PAS domain Sfum_1862 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Sfum_1862 SM00387 Histidine kinase-like ATPases Sfum_1862 SM00388 His Kinase A (phosphoacceptor) domain Sfum_1866 SM00530 Helix-turn-helix XRE-family like proteins Sfum_1869 SM00387 Histidine kinase-like ATPases Sfum_1869 SM00448 cheY-homologous receiver domain Sfum_1870 SM00028 Tetratricopeptide repeats Sfum_1903 SM00834 Putative regulatory protein Sfum_1905 SM00729 Elongator protein 3, MiaB family, Radical SAM Sfum_1906 SM00387 Histidine kinase-like ATPases Sfum_1906 SM00388 His Kinase A (phosphoacceptor) domain Sfum_1906 SM00448 cheY-homologous receiver domain Sfum_1909 SM00382 ATPases associated with a variety of cellular activities Sfum_1912 SM00091 PAS domain Sfum_1915 SM00116 Domain in cystathionine beta-synthase and other proteins. Sfum_1919 SM00853 MutL C terminal dimerisation domain Sfum_1919 SM01340 Sfum_1919 Sfum_1926 SM00363 S4 RNA-binding domain Sfum_1933 SM00091 PAS domain Sfum_1933 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Sfum_1933 SM00387 Histidine kinase-like ATPases Sfum_1933 SM00388 His Kinase A (phosphoacceptor) domain Sfum_1934 SM00382 ATPases associated with a variety of cellular activities Sfum_1934 SM00448 cheY-homologous receiver domain Sfum_1949 SM00091 PAS domain Sfum_1949 SM00387 Histidine kinase-like ATPases Sfum_1949 SM00388 His Kinase A (phosphoacceptor) domain Sfum_1954 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Sfum_1954 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Sfum_1955 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Sfum_1958 SM00849 Metallo-beta-lactamase superfamily Sfum_1963 SM00062 Bacterial periplasmic substrate-binding proteins Sfum_1964 SM00563 Phosphate acyltransferases Sfum_1966 SM00881 CoA binding domain Sfum_1997 SM00563 Phosphate acyltransferases Sfum_2005 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Sfum_2006 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Sfum_2006 SM00387 Histidine kinase-like ATPases Sfum_2006 SM00388 His Kinase A (phosphoacceptor) domain Sfum_2007 SM00448 cheY-homologous receiver domain Sfum_2007 SM00862 Transcriptional regulatory protein, C terminal Sfum_2010 SM01092 CO dehydrogenase flavoprotein C-terminal domain Sfum_2012 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Sfum_2018 SM00849 Metallo-beta-lactamase superfamily Sfum_2022 SM00205 Thaumatin family Sfum_2038 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Sfum_2044 SM00257 Lysin motif Sfum_2051 SM00062 Bacterial periplasmic substrate-binding proteins Sfum_2061 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Sfum_2062 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Sfum_2070 SM00382 ATPases associated with a variety of cellular activities Sfum_2076 SM00116 Domain in cystathionine beta-synthase and other proteins. Sfum_2078 SM00849 Metallo-beta-lactamase superfamily Sfum_2092 SM00382 ATPases associated with a variety of cellular activities Sfum_2092 SM00448 cheY-homologous receiver domain Sfum_2097 SM00342 helix_turn_helix, arabinose operon control protein Sfum_2107 SM00411 bacterial (prokaryotic) histone like domain Sfum_2109 SM01049 Sfum_2109 Sfum_2111 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Sfum_2111 SM00954 Region found in RelA / SpoT proteins Sfum_2118 SM00316 Ribosomal protein S1-like RNA-binding domain Sfum_2122 SM00116 Domain in cystathionine beta-synthase and other proteins. Sfum_2122 SM01240 Sfum_2122 Sfum_2133 SM00382 ATPases associated with a variety of cellular activities Sfum_2143 SM00382 ATPases associated with a variety of cellular activities Sfum_2144 SM00382 ATPases associated with a variety of cellular activities Sfum_2152 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Sfum_2152 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Sfum_2158 SM00135 Low-density lipoprotein-receptor YWTD domain Sfum_2158 SM00710 Parallel beta-helix repeats Sfum_2164 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Sfum_2171 SM00729 Elongator protein 3, MiaB family, Radical SAM Sfum_2174 SM00917 LeuA allosteric (dimerisation) domain Sfum_2176 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Sfum_2177 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Sfum_2177 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Sfum_2197 SM00729 Elongator protein 3, MiaB family, Radical SAM Sfum_2198 SM00729 Elongator protein 3, MiaB family, Radical SAM Sfum_2200 SM00357 Cold shock protein domain Sfum_2202 SM00116 Domain in cystathionine beta-synthase and other proteins. Sfum_2204 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Sfum_2204 SM00331 Sigma factor PP2C-like phosphatases Sfum_2207 SM00448 cheY-homologous receiver domain Sfum_2208 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Sfum_2208 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Sfum_2208 SM00387 Histidine kinase-like ATPases Sfum_2208 SM00388 His Kinase A (phosphoacceptor) domain Sfum_2208 SM00448 cheY-homologous receiver domain Sfum_2209 SM00052 Putative diguanylate phosphodiesterase Sfum_2209 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Sfum_2209 SM00091 PAS domain Sfum_2209 SM00267 diguanylate cyclase Sfum_2209 SM00448 cheY-homologous receiver domain Sfum_2210 SM00729 Elongator protein 3, MiaB family, Radical SAM Sfum_2214 SM00091 PAS domain Sfum_2214 SM00382 ATPases associated with a variety of cellular activities Sfum_2215 SM00382 ATPases associated with a variety of cellular activities Sfum_2217 SM00382 ATPases associated with a variety of cellular activities Sfum_2227 SM01359 Sfum_2227 Sfum_2227 SM01360 Sfum_2227 Sfum_2233 SM00382 ATPases associated with a variety of cellular activities Sfum_2247 SM00746 metallochaperone-like domain Sfum_2258 SM00382 ATPases associated with a variety of cellular activities Sfum_2281 SM00382 ATPases associated with a variety of cellular activities Sfum_2282 SM00382 ATPases associated with a variety of cellular activities Sfum_2287 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain Sfum_2289 SM00382 ATPases associated with a variety of cellular activities Sfum_2290 SM00882 Coenzyme A transferase Sfum_2291 SM00882 Coenzyme A transferase Sfum_2292 SM00382 ATPases associated with a variety of cellular activities Sfum_2292 SM00448 cheY-homologous receiver domain Sfum_2294 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Sfum_2294 SM00387 Histidine kinase-like ATPases Sfum_2294 SM00388 His Kinase A (phosphoacceptor) domain Sfum_2303 SM00448 cheY-homologous receiver domain Sfum_2304 SM00091 PAS domain Sfum_2304 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Sfum_2304 SM00387 Histidine kinase-like ATPases Sfum_2304 SM00388 His Kinase A (phosphoacceptor) domain Sfum_2304 SM00448 cheY-homologous receiver domain Sfum_2307 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Sfum_2307 SM00091 PAS domain Sfum_2307 SM00388 His Kinase A (phosphoacceptor) domain Sfum_2310 SM00244 prohibitin homologues Sfum_2313 SM00382 ATPases associated with a variety of cellular activities Sfum_2314 SM00382 ATPases associated with a variety of cellular activities Sfum_2317 SM00345 helix_turn_helix gluconate operon transcriptional repressor Sfum_2317 SM00895 Sfum_2317 Sfum_2319 SM00729 Elongator protein 3, MiaB family, Radical SAM Sfum_2324 SM00729 Elongator protein 3, MiaB family, Radical SAM Sfum_2326 SM00382 ATPases associated with a variety of cellular activities Sfum_2334 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Sfum_2346 SM00883 Chaperonin 10 Kd subunit Sfum_2349 SM00642 Alpha-amylase domain Sfum_2351 SM00642 Alpha-amylase domain Sfum_2352 SM00116 Domain in cystathionine beta-synthase and other proteins. Sfum_2364 SM00271 DnaJ molecular chaperone homology domain Sfum_2379 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Sfum_2379 SM00091 PAS domain Sfum_2379 SM00387 Histidine kinase-like ATPases Sfum_2379 SM00388 His Kinase A (phosphoacceptor) domain Sfum_2379 SM00448 cheY-homologous receiver domain Sfum_2382 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain Sfum_2382 SM01080 Sfum_2382 Sfum_2388 SM00091 PAS domain Sfum_2388 SM00387 Histidine kinase-like ATPases Sfum_2391 SM00382 ATPases associated with a variety of cellular activities Sfum_2396 SM00116 Domain in cystathionine beta-synthase and other proteins. Sfum_2396 SM00924 MgtE intracellular N domain Sfum_2401 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Sfum_2401 SM00091 PAS domain Sfum_2401 SM00387 Histidine kinase-like ATPases Sfum_2401 SM00388 His Kinase A (phosphoacceptor) domain Sfum_2401 SM00448 cheY-homologous receiver domain Sfum_2411 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Sfum_2415 SM00382 ATPases associated with a variety of cellular activities Sfum_2422 SM00891 ERCC4 domain Sfum_2430 SM00729 Elongator protein 3, MiaB family, Radical SAM Sfum_2442 SM00382 ATPases associated with a variety of cellular activities Sfum_2442 SM00448 cheY-homologous receiver domain Sfum_2443 SM00387 Histidine kinase-like ATPases Sfum_2443 SM00388 His Kinase A (phosphoacceptor) domain Sfum_2447 SM00028 Tetratricopeptide repeats Sfum_2449 SM00382 ATPases associated with a variety of cellular activities Sfum_2453 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Sfum_2453 SM00331 Sigma factor PP2C-like phosphatases Sfum_2460 SM00382 ATPases associated with a variety of cellular activities Sfum_2460 SM00962 SRP54-type protein, GTPase domain Sfum_2460 SM00963 SRP54-type protein, helical bundle domain Sfum_2463 SM00829 Enoylreductase Sfum_2464 SM01133 Sfum_2464 Sfum_2465 SM01007 Class II Aldolase and Adducin N-terminal domain Sfum_2466 SM00881 CoA binding domain Sfum_2471 SM00729 Elongator protein 3, MiaB family, Radical SAM Sfum_2473 SM01001 AIR carboxylase Sfum_2478 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Sfum_2478 SM00267 diguanylate cyclase Sfum_2483 SM00950 Sfum_2483 Sfum_2488 SM00116 Domain in cystathionine beta-synthase and other proteins. Sfum_2491 SM00899 Sfum_2491 Sfum_2492 SM00899 Sfum_2492 Sfum_2495 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Sfum_2495 SM00091 PAS domain Sfum_2495 SM00387 Histidine kinase-like ATPases Sfum_2495 SM00388 His Kinase A (phosphoacceptor) domain Sfum_2504 SM00891 ERCC4 domain Sfum_2507 SM00382 ATPases associated with a variety of cellular activities Sfum_2510 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Sfum_2511 SM01092 CO dehydrogenase flavoprotein C-terminal domain Sfum_2516 SM00382 ATPases associated with a variety of cellular activities Sfum_2521 SM00382 ATPases associated with a variety of cellular activities Sfum_2527 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Sfum_2528 SM00382 ATPases associated with a variety of cellular activities Sfum_2530 SM00852 Probable molybdopterin binding domain Sfum_2535 SM00060 Fibronectin type 3 domain Sfum_2536 SM00028 Tetratricopeptide repeats Sfum_2536 SM00220 Serine/Threonine protein kinases, catalytic domain Sfum_2537 SM00028 Tetratricopeptide repeats Sfum_2537 SM00220 Serine/Threonine protein kinases, catalytic domain Sfum_2540 SM00331 Sigma factor PP2C-like phosphatases Sfum_2540 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain Sfum_2541 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Sfum_2541 SM00240 Forkhead associated domain Sfum_2541 SM00388 His Kinase A (phosphoacceptor) domain Sfum_2544 SM00834 Putative regulatory protein Sfum_2559 SM00698 Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases. Sfum_2560 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Sfum_2560 SM00387 Histidine kinase-like ATPases Sfum_2560 SM00388 His Kinase A (phosphoacceptor) domain Sfum_2569 SM00671 Sel1-like repeats. Sfum_2576 SM00966 SpoVT / AbrB like domain Sfum_2578 SM00322 K homology RNA-binding domain Sfum_2578 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Sfum_2582 SM00382 ATPases associated with a variety of cellular activities Sfum_2596 SM01234 Sfum_2596 Sfum_2598 SM00393 Putative single-stranded nucleic acids-binding domain Sfum_2598 SM01245 Sfum_2598 Sfum_2606 SM00470 ParB-like nuclease domain Sfum_2613 SM00271 DnaJ molecular chaperone homology domain Sfum_2616 SM00382 ATPases associated with a variety of cellular activities Sfum_2621 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Sfum_2621 SM00387 Histidine kinase-like ATPases Sfum_2621 SM00388 His Kinase A (phosphoacceptor) domain Sfum_2622 SM00382 ATPases associated with a variety of cellular activities Sfum_2622 SM00448 cheY-homologous receiver domain Sfum_2629 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Sfum_2629 SM00091 PAS domain Sfum_2629 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Sfum_2629 SM00387 Histidine kinase-like ATPases Sfum_2631 SM00825 Beta-ketoacyl synthase Sfum_2637 SM00382 ATPases associated with a variety of cellular activities Sfum_2638 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Sfum_2638 SM00091 PAS domain Sfum_2638 SM00387 Histidine kinase-like ATPases Sfum_2639 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Sfum_2639 SM00091 PAS domain Sfum_2639 SM00387 Histidine kinase-like ATPases Sfum_2639 SM00448 cheY-homologous receiver domain Sfum_2643 SM00487 DEAD-like helicases superfamily Sfum_2643 SM00490 helicase superfamily c-terminal domain Sfum_2644 SM00729 Elongator protein 3, MiaB family, Radical SAM Sfum_2647 SM00861 Transketolase, pyrimidine binding domain Sfum_2650 SM00267 diguanylate cyclase Sfum_2656 SM00448 cheY-homologous receiver domain Sfum_2656 SM00862 Transcriptional regulatory protein, C terminal Sfum_2657 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Sfum_2657 SM00387 Histidine kinase-like ATPases Sfum_2657 SM00388 His Kinase A (phosphoacceptor) domain Sfum_2658 SM00091 PAS domain Sfum_2658 SM00387 Histidine kinase-like ATPases Sfum_2658 SM00388 His Kinase A (phosphoacceptor) domain Sfum_2658 SM00448 cheY-homologous receiver domain Sfum_2659 SM00897 FIST N domain Sfum_2659 SM01204 Sfum_2659 Sfum_2660 SM00116 Domain in cystathionine beta-synthase and other proteins. Sfum_2661 SM00116 Domain in cystathionine beta-synthase and other proteins. Sfum_2675 SM00387 Histidine kinase-like ATPases Sfum_2675 SM00388 His Kinase A (phosphoacceptor) domain Sfum_2677 SM00487 DEAD-like helicases superfamily Sfum_2677 SM00491 Sfum_2677 Sfum_2679 SM00116 Domain in cystathionine beta-synthase and other proteins. Sfum_2680 SM00116 Domain in cystathionine beta-synthase and other proteins. Sfum_2688 SM00480 DNA polymerase III beta subunit Sfum_2689 SM00387 Histidine kinase-like ATPases Sfum_2689 SM00433 TopoisomeraseII Sfum_2690 SM00434 DNA Topoisomerase IV Sfum_2697 SM00900 Sfum_2697 Sfum_2704 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Sfum_2705 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Sfum_2705 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Sfum_2709 SM00387 Histidine kinase-like ATPases Sfum_2713 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Sfum_2714 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Sfum_2723 SM00830 Chorismate mutase type II Sfum_2727 SM00833 Cobalamin synthesis protein cobW C-terminal domain Sfum_2731 SM00448 cheY-homologous receiver domain Sfum_2732 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Sfum_2733 SM00478 endonuclease III Sfum_2733 SM00525 Sfum_2733 Sfum_2734 SM00382 ATPases associated with a variety of cellular activities Sfum_2739 SM00382 ATPases associated with a variety of cellular activities Sfum_2758 SM01001 AIR carboxylase Sfum_2759 SM01209 Sfum_2759 Sfum_2759 SM01210 Sfum_2759 Sfum_2760 SM00851 MGS-like domain Sfum_2763 SM00091 PAS domain Sfum_2763 SM00387 Histidine kinase-like ATPases Sfum_2763 SM00388 His Kinase A (phosphoacceptor) domain Sfum_2764 SM00382 ATPases associated with a variety of cellular activities Sfum_2764 SM00448 cheY-homologous receiver domain Sfum_2772 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Sfum_2772 SM00382 ATPases associated with a variety of cellular activities Sfum_2777 SM00919 Malic enzyme, NAD binding domain Sfum_2777 SM01274 Sfum_2777 Sfum_2784 SM00838 Elongation factor G C-terminus Sfum_2784 SM00889 Elongation factor G, domain IV Sfum_2785 SM00257 Lysin motif Sfum_2789 SM00382 ATPases associated with a variety of cellular activities Sfum_2791 SM00493 Sfum_2791 Sfum_2799 SM00507 HNH nucleases Sfum_2802 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain Sfum_2803 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. Sfum_2806 SM00382 ATPases associated with a variety of cellular activities Sfum_2806 SM00448 cheY-homologous receiver domain Sfum_2807 SM00091 PAS domain Sfum_2807 SM00387 Histidine kinase-like ATPases Sfum_2807 SM00388 His Kinase A (phosphoacceptor) domain Sfum_2810 SM00382 ATPases associated with a variety of cellular activities Sfum_2817 SM00382 ATPases associated with a variety of cellular activities Sfum_2824 SM00487 DEAD-like helicases superfamily Sfum_2824 SM00490 helicase superfamily c-terminal domain Sfum_2829 SM01101 Sfum_2829 Sfum_2832 SM00382 ATPases associated with a variety of cellular activities Sfum_2837 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Sfum_2837 SM00091 PAS domain Sfum_2837 SM00387 Histidine kinase-like ATPases Sfum_2837 SM00388 His Kinase A (phosphoacceptor) domain Sfum_2846 SM00345 helix_turn_helix gluconate operon transcriptional repressor Sfum_2846 SM00895 Sfum_2846 Sfum_2857 SM00382 ATPases associated with a variety of cellular activities Sfum_2866 SM00382 ATPases associated with a variety of cellular activities Sfum_2876 SM00710 Parallel beta-helix repeats Sfum_2881 SM00507 HNH nucleases Sfum_2884 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Sfum_2890 SM00382 ATPases associated with a variety of cellular activities Sfum_2891 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Sfum_2891 SM00387 Histidine kinase-like ATPases Sfum_2891 SM00388 His Kinase A (phosphoacceptor) domain Sfum_2892 SM00448 cheY-homologous receiver domain Sfum_2892 SM00862 Transcriptional regulatory protein, C terminal Sfum_2894 SM00851 MGS-like domain Sfum_2898 SM00382 ATPases associated with a variety of cellular activities Sfum_2919 SM00429 ig-like, plexins, transcription factors Sfum_2929 SM00729 Elongator protein 3, MiaB family, Radical SAM Sfum_2941 SM00100 Cyclic nucleotide-monophosphate binding domain Sfum_2941 SM00419 helix_turn_helix, cAMP Regulatory protein Sfum_2943 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Sfum_2943 SM00091 PAS domain Sfum_2943 SM00387 Histidine kinase-like ATPases Sfum_2943 SM00388 His Kinase A (phosphoacceptor) domain Sfum_2943 SM00448 cheY-homologous receiver domain Sfum_2946 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Sfum_2954 SM00448 cheY-homologous receiver domain Sfum_2955 SM00382 ATPases associated with a variety of cellular activities Sfum_2955 SM00448 cheY-homologous receiver domain Sfum_2956 SM00642 Alpha-amylase domain Sfum_2963 SM00382 ATPases associated with a variety of cellular activities Sfum_2963 SM00487 DEAD-like helicases superfamily Sfum_2963 SM00490 helicase superfamily c-terminal domain Sfum_2963 SM00847 Helicase associated domain (HA2) Add an annotation Sfum_2966 SM00116 Domain in cystathionine beta-synthase and other proteins. Sfum_2975 SM00448 cheY-homologous receiver domain Sfum_2979 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Sfum_2989 SM01329 Sfum_2989 Sfum_2990 SM00859 Semialdehyde dehydrogenase, NAD binding domain Sfum_2996 SM00382 ATPases associated with a variety of cellular activities Sfum_2996 SM00962 SRP54-type protein, GTPase domain Sfum_2996 SM00963 SRP54-type protein, helical bundle domain Sfum_3007 SM00365 Leucine-rich repeat, SDS22-like subfamily Sfum_3007 SM00369 Leucine-rich repeats, typical (most populated) subfamily Sfum_3017 SM00448 cheY-homologous receiver domain Sfum_3021 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Sfum_3031 SM01329 Sfum_3031 Sfum_3032 SM00859 Semialdehyde dehydrogenase, NAD binding domain Sfum_3038 SM00382 ATPases associated with a variety of cellular activities Sfum_3038 SM00962 SRP54-type protein, GTPase domain Sfum_3038 SM00963 SRP54-type protein, helical bundle domain Sfum_3049 SM00365 Leucine-rich repeat, SDS22-like subfamily Sfum_3049 SM00369 Leucine-rich repeats, typical (most populated) subfamily Sfum_3055 SM00382 ATPases associated with a variety of cellular activities Sfum_3055 SM01086 C-terminal, D2-small domain, of ClpB protein Sfum_3056 SM00729 Elongator protein 3, MiaB family, Radical SAM Sfum_3057 SM01004 Delta-aminolevulinic acid dehydratase Sfum_3058 SM00729 Elongator protein 3, MiaB family, Radical SAM Sfum_3059 SM00450 Rhodanese Homology Domain Sfum_3063 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Sfum_3063 SM00245 tail specific protease Sfum_3066 SM00382 ATPases associated with a variety of cellular activities Sfum_3076 SM00852 Probable molybdopterin binding domain Sfum_3078 SM00966 SpoVT / AbrB like domain Sfum_3083 SM00798 AICARFT/IMPCHase bienzyme Sfum_3085 SM01133 Sfum_3085 Sfum_3089 SM00729 Elongator protein 3, MiaB family, Radical SAM Sfum_3097 SM00563 Phosphate acyltransferases Sfum_3101 SM00382 ATPases associated with a variety of cellular activities Sfum_3102 SM00382 ATPases associated with a variety of cellular activities Sfum_3106 SM01002 Alanine dehydrogenase/PNT, C-terminal domain Sfum_3106 SM01003 Alanine dehydrogenase/PNT, N-terminal domain Sfum_3109 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Sfum_3109 SM00387 Histidine kinase-like ATPases Sfum_3109 SM00388 His Kinase A (phosphoacceptor) domain Sfum_3111 SM00382 ATPases associated with a variety of cellular activities Sfum_3111 SM00448 cheY-homologous receiver domain Sfum_3112 SM00091 PAS domain Sfum_3112 SM00387 Histidine kinase-like ATPases Sfum_3112 SM00388 His Kinase A (phosphoacceptor) domain Sfum_3112 SM00448 cheY-homologous receiver domain Sfum_3113 SM01259 Sfum_3113 Sfum_3127 SM00729 Elongator protein 3, MiaB family, Radical SAM Sfum_3148 SM00345 helix_turn_helix gluconate operon transcriptional repressor Sfum_3148 SM00895 Sfum_3148 Sfum_3151 SM00671 Sel1-like repeats. Sfum_3163 SM00062 Bacterial periplasmic substrate-binding proteins Sfum_3163 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. Sfum_3166 SM00382 ATPases associated with a variety of cellular activities Sfum_3172 SM00091 PAS domain Sfum_3182 SM00904 Riboflavin kinase Sfum_3184 SM00382 ATPases associated with a variety of cellular activities Sfum_3195 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Sfum_3197 SM00382 ATPases associated with a variety of cellular activities Sfum_3203 SM00834 Putative regulatory protein Sfum_3211 SM00448 cheY-homologous receiver domain Sfum_3214 SM00357 Cold shock protein domain Sfum_3227 SM01117 Sfum_3227 Sfum_3233 SM00729 Elongator protein 3, MiaB family, Radical SAM Sfum_3236 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Sfum_3236 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Sfum_3237 SM00220 Serine/Threonine protein kinases, catalytic domain Sfum_3243 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Sfum_3243 SM00091 PAS domain Sfum_3243 SM00387 Histidine kinase-like ATPases Sfum_3244 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Sfum_3249 SM00100 Cyclic nucleotide-monophosphate binding domain Sfum_3250 SM00382 ATPases associated with a variety of cellular activities Sfum_3253 SM00849 Metallo-beta-lactamase superfamily Sfum_3254 SM00091 PAS domain Sfum_3254 SM00387 Histidine kinase-like ATPases Sfum_3257 SM00267 diguanylate cyclase Sfum_3265 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Sfum_3268 SM00382 ATPases associated with a variety of cellular activities Sfum_3268 SM00448 cheY-homologous receiver domain Sfum_3269 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Sfum_3269 SM00387 Histidine kinase-like ATPases Sfum_3269 SM00388 His Kinase A (phosphoacceptor) domain Sfum_3271 SM00487 DEAD-like helicases superfamily Sfum_3275 SM00460 Transglutaminase/protease-like homologues Sfum_3277 SM00382 ATPases associated with a variety of cellular activities Sfum_3281 SM00382 ATPases associated with a variety of cellular activities Sfum_3282 SM00829 Enoylreductase Sfum_3285 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. Sfum_3287 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Sfum_3288 SM00448 cheY-homologous receiver domain Sfum_3292 SM00448 cheY-homologous receiver domain Sfum_3292 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Sfum_3293 SM00387 Histidine kinase-like ATPases Sfum_3307 SM00450 Rhodanese Homology Domain Sfum_3310 SM00028 Tetratricopeptide repeats Sfum_3312 SM00650 Ribosomal RNA adenine dimethylases Sfum_3314 SM00382 ATPases associated with a variety of cellular activities Sfum_3323 SM00271 DnaJ molecular chaperone homology domain Sfum_3331 SM00829 Enoylreductase Sfum_3333 SM00854 Bacterial capsule synthesis protein PGA_cap Sfum_3354 SM00382 ATPases associated with a variety of cellular activities Sfum_3356 SM00984 UDP binding domain Sfum_3367 SM00845 GatB domain Sfum_3369 SM00487 DEAD-like helicases superfamily Sfum_3369 SM00490 helicase superfamily c-terminal domain Sfum_3369 SM01142 Sfum_3369 Sfum_3370 SM00984 UDP binding domain Sfum_3372 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Sfum_3373 SM00729 Elongator protein 3, MiaB family, Radical SAM Sfum_3384 SM00248 ankyrin repeats Sfum_3390 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Sfum_3394 SM00797 Allophanate hydrolase subunit 2 Sfum_3395 SM00796 Allophanate hydrolase subunit 1 Sfum_3396 SM00382 ATPases associated with a variety of cellular activities Sfum_3397 SM00382 ATPases associated with a variety of cellular activities Sfum_3423 SM00347 helix_turn_helix multiple antibiotic resistance protein Sfum_3423 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Sfum_3428 SM00530 Helix-turn-helix XRE-family like proteins Sfum_3435 SM00331 Sigma factor PP2C-like phosphatases Sfum_3435 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain Sfum_3436 SM00240 Forkhead associated domain Sfum_3438 SM00382 ATPases associated with a variety of cellular activities Sfum_3439 SM00248 ankyrin repeats Sfum_3444 SM00903 Flavin reductase like domain Sfum_3445 SM00100 Cyclic nucleotide-monophosphate binding domain Sfum_3445 SM00419 helix_turn_helix, cAMP Regulatory protein Sfum_3451 SM00642 Alpha-amylase domain Sfum_3457 SM00318 Staphylococcal nuclease homologues Sfum_3460 SM00823 Phosphopantetheine attachment site Sfum_3473 SM00842 Cell division protein FtsA Sfum_3474 SM00864 Tubulin/FtsZ family, GTPase domain Sfum_3474 SM00865 Tubulin/FtsZ family, C-terminal domain Sfum_3475 SM00729 Elongator protein 3, MiaB family, Radical SAM Sfum_3476 SM00271 DnaJ molecular chaperone homology domain Sfum_3479 SM00487 DEAD-like helicases superfamily Sfum_3479 SM00490 helicase superfamily c-terminal domain Sfum_3479 SM00982 Sfum_3479 Sfum_3479 SM01058 CarD-like/TRCF domain Sfum_3488 SM00327 von Willebrand factor (vWF) type A domain Sfum_3490 SM00382 ATPases associated with a variety of cellular activities Sfum_3496 SM00382 ATPases associated with a variety of cellular activities Sfum_3509 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Sfum_3509 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Sfum_3510 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Sfum_3517 SM00091 PAS domain Sfum_3517 SM00387 Histidine kinase-like ATPases Sfum_3517 SM00388 His Kinase A (phosphoacceptor) domain Sfum_3519 SM00091 PAS domain Sfum_3519 SM00387 Histidine kinase-like ATPases Sfum_3519 SM00388 His Kinase A (phosphoacceptor) domain Sfum_3519 SM00448 cheY-homologous receiver domain Sfum_3544 SM00382 ATPases associated with a variety of cellular activities Sfum_3545 SM00382 ATPases associated with a variety of cellular activities Sfum_3547 SM00861 Transketolase, pyrimidine binding domain Sfum_3555 SM00382 ATPases associated with a variety of cellular activities Sfum_3561 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Sfum_3564 SM00448 cheY-homologous receiver domain Sfum_3564 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Sfum_3567 SM00387 Histidine kinase-like ATPases Sfum_3567 SM00448 cheY-homologous receiver domain Sfum_3577 SM00345 helix_turn_helix gluconate operon transcriptional repressor Sfum_3577 SM00895 Sfum_3577 Sfum_3579 SM00849 Metallo-beta-lactamase superfamily Sfum_3592 SM00091 PAS domain Sfum_3592 SM00382 ATPases associated with a variety of cellular activities Sfum_3601 SM00226 Low molecular weight phosphatase family Sfum_3607 SM00529 Helix-turn-helix diphteria tox regulatory element Sfum_3612 SM00833 Cobalamin synthesis protein cobW C-terminal domain Sfum_3614 SM00387 Histidine kinase-like ATPases Sfum_3614 SM00388 His Kinase A (phosphoacceptor) domain Sfum_3615 SM00448 cheY-homologous receiver domain Sfum_3615 SM00862 Transcriptional regulatory protein, C terminal Sfum_3616 SM00327 von Willebrand factor (vWF) type A domain Sfum_3624 SM00387 Histidine kinase-like ATPases Sfum_3625 SM00287 Bacterial SH3 domain homologues Sfum_3629 SM00967 RNA 2'-O ribose methyltransferase substrate binding Sfum_3630 SM00072 Guanylate kinase homologues. Sfum_3643 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase Sfum_3647 SM00028 Tetratricopeptide repeats Sfum_3652 SM01400 Sfum_3652 Sfum_3655 SM01058 CarD-like/TRCF domain Sfum_3656 SM00670 Large family of predicted nucleotide-binding domains Sfum_3657 SM00363 S4 RNA-binding domain Sfum_3666 SM00382 ATPases associated with a variety of cellular activities Sfum_3668 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Sfum_3668 SM00091 PAS domain Sfum_3668 SM00387 Histidine kinase-like ATPases Sfum_3674 SM00448 cheY-homologous receiver domain Sfum_3674 SM00862 Transcriptional regulatory protein, C terminal Sfum_3686 SM00893 Electron transfer flavoprotein domain Sfum_3687 SM00893 Electron transfer flavoprotein domain Sfum_3690 SM00327 von Willebrand factor (vWF) type A domain Sfum_3690 SM00609 Vault protein Inter-alpha-Trypsin domain Sfum_3696 SM00382 ATPases associated with a variety of cellular activities Sfum_3704 SM00382 ATPases associated with a variety of cellular activities Sfum_3707 SM00530 Helix-turn-helix XRE-family like proteins Sfum_3714 SM00825 Beta-ketoacyl synthase Sfum_3729 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Sfum_3733 SM00710 Parallel beta-helix repeats Sfum_3737 SM00382 ATPases associated with a variety of cellular activities Sfum_3737 SM00448 cheY-homologous receiver domain Sfum_3738 SM00448 cheY-homologous receiver domain Sfum_3738 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Sfum_3740 SM00091 PAS domain Sfum_3740 SM00387 Histidine kinase-like ATPases Sfum_3740 SM00388 His Kinase A (phosphoacceptor) domain Sfum_3740 SM00448 cheY-homologous receiver domain Sfum_3741 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Sfum_3741 SM00091 PAS domain Sfum_3741 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Sfum_3741 SM00387 Histidine kinase-like ATPases Sfum_3741 SM00388 His Kinase A (phosphoacceptor) domain Sfum_3741 SM00448 cheY-homologous receiver domain Sfum_3744 SM00382 ATPases associated with a variety of cellular activities Sfum_3746 SM00935 Outer membrane protein (OmpH-like) Sfum_3760 SM00490 helicase superfamily c-terminal domain Sfum_3762 SM00382 ATPases associated with a variety of cellular activities Sfum_3764 SM00257 Lysin motif Sfum_3764 SM00644 Sfum_3764 Sfum_3764 SM00701 Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme. Sfum_3765 SM00382 ATPases associated with a variety of cellular activities Sfum_3765 SM00448 cheY-homologous receiver domain Sfum_3768 SM00529 Helix-turn-helix diphteria tox regulatory element Sfum_3776 SM00857 Resolvase, N terminal domain Sfum_3788 SM00891 ERCC4 domain Sfum_3790 SM00400 zinc finger Sfum_3846 SM00487 DEAD-like helicases superfamily Sfum_3846 SM00490 helicase superfamily c-terminal domain Sfum_3849 SM00220 Serine/Threonine protein kinases, catalytic domain Sfum_3850 SM00490 helicase superfamily c-terminal domain Sfum_3852 SM00155 Phospholipase D. Active site motifs. Sfum_3858 SM00347 helix_turn_helix multiple antibiotic resistance protein Sfum_3865 SM01022 Sfum_3865 Sfum_3896 SM01329 Sfum_3896 Sfum_3901 SM00382 ATPases associated with a variety of cellular activities Sfum_3903 SM00062 Bacterial periplasmic substrate-binding proteins Sfum_3911 SM00851 MGS-like domain Sfum_3911 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Sfum_3929 SM00893 Electron transfer flavoprotein domain Sfum_3930 SM00893 Electron transfer flavoprotein domain Sfum_3933 SM00882 Coenzyme A transferase Sfum_3934 SM00091 PAS domain Sfum_3934 SM00382 ATPases associated with a variety of cellular activities Sfum_3936 SM00910 Sfum_3936 Sfum_3947 SM00382 ATPases associated with a variety of cellular activities Sfum_3950 SM00062 Bacterial periplasmic substrate-binding proteins Sfum_3952 SM00116 Domain in cystathionine beta-synthase and other proteins. Sfum_3982 SM00028 Tetratricopeptide repeats Sfum_3983 SM00028 Tetratricopeptide repeats Sfum_3988 SM00382 ATPases associated with a variety of cellular activities Sfum_3991 SM00091 PAS domain Sfum_3991 SM00387 Histidine kinase-like ATPases Sfum_3992 SM00448 cheY-homologous receiver domain Sfum_3998 SM00891 ERCC4 domain Sfum_4005 SM00645 Papain family cysteine protease Sfum_4019 SM00382 ATPases associated with a variety of cellular activities Sfum_4027 SM00100 Cyclic nucleotide-monophosphate binding domain Sfum_4027 SM00331 Sigma factor PP2C-like phosphatases Sfum_4030 SM00100 Cyclic nucleotide-monophosphate binding domain Sfum_4031 SM00382 ATPases associated with a variety of cellular activities Sfum_4040 SM00028 Tetratricopeptide repeats Sfum_4049 SM00357 Cold shock protein domain Sfum_4050 SM01091 Transporter associated domain Sfum_4054 SM00028 Tetratricopeptide repeats Sfum_4057 SM00729 Elongator protein 3, MiaB family, Radical SAM Sfum_4068 SM00530 Helix-turn-helix XRE-family like proteins Sfum_4072 SM00382 ATPases associated with a variety of cellular activities Sfum_4073 SM00382 ATPases associated with a variety of cellular activities Sfum_4079 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain Sfum_4080 SM01152 Sfum_4080 Sfum_4082 SM00028 Tetratricopeptide repeats Sfum_4085 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain Sfum_4085 SM01080 Sfum_4085 Sfum_4087 SM00729 Elongator protein 3, MiaB family, Radical SAM Sfum_4088 SM00028 Tetratricopeptide repeats Sfum_4089 SM00849 Metallo-beta-lactamase superfamily Sfum_4103 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif.